RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for WDR48 (Homo sapiens)

Ensembl gene IDs: ENSG00000114742

Ensembl transcript IDs: ENST00000302313.10, ENST00000413099.6, ENST00000420940.6, ENST00000423296.6, ENST00000433841.6, ENST00000441361.1, ENST00000463198.1, ENST00000466405.1

Found 525 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTGCACCTCCCTGGGGTTGCCACAAAGCCAGGACATCATGGGAGGTaGAGCATCGCTAGGCATGGGCTGCACAAACTCCGGCCCAACAGT +
Preference number: 1 (lower is better)
Translates to: LHLPGVATKPGHHGR*SIARHGLHKLRPNS
Trigger: ACTGTTGGGCCGGAGTTTGTGCAGCCCATGCCTAGCGATGCTGCACCTCCCATGATGTCCTGGCTTTGTGGCAACCCCAGGGAGGTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302313.10
3UTR TCA 90 bp CGACCTCCAGCTTCACCAAAGATCACGGGTGTATGTGGGGGCACTTaGAAATATCCATTTCCCTTCTGCACTCGGTTCTCCTGCTCCCCA +
Preference number: 1 (lower is better)
Translates to: RPPASPKITGVCGGT*KYPFPFCTRFSCSP
Trigger: TGGGGAGCAGGAGAACCGAGTGCAGAAGGGAAATGGATATTTTCAAGTGCCCCCACATACACCCGTGATCTTTGGTGAAGCTGGAGGTCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
3UTR TCA 90 bp CACACACAAGCTAGGGAGGCAACTGGACTGGAATCAACTGCCCTCTaGAGGCACTTGTGCTTCTGGCTTCATACAGGAGGCTTGTCTTAC +
Preference number: 1 (lower is better)
Translates to: HTQAREATGLESTAL*RHLCFWLHTGGLSY
Trigger: GTAAGACAAGCCTCCTGTATGAAGCCAGAAGCACAAGTGCCTTCAGAGGGCAGTTGATTCCAGTCCAGTTGCCTCCCTAGCTTGTGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
3UTR TCA 90 bp GGGCTTCCTAGGACTACTCTTGGGGCCATAGAGGAAGGTCGTAAATaGATATCCAGGAGCATTAGCCCAGCCTTCACGTGGACTTCTGAC +
Preference number: 1 (lower is better)
Translates to: GLPRTTLGAIEEGRK*ISRSISPAFTWTSD
Trigger: GTCAGAAGTCCACGTGAAGGCTGGGCTAATGCTCCTGGATATTCATTTACGACCTTCCTCTATGGCCCCAAGAGTAGTCCTAGGAAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
3UTR GCA 90 bp CACTGGCCTGTTGTCAGTCTTCTGTACATCTTGAAAGACATAGTCTaGTTGGGGCTCTTCTGCTCTTGCACTCTGCTTCCCTGGGGACAG +
Preference number: 1 (lower is better)
Translates to: HWPVVSLLYILKDIV*LGLFCSCTLLPWGQ
Trigger: CTGTCCCCAGGGAAGCAGAGTGCAAGAGCAGAAGAGCCCCAAGCAGACTATGTCTTTCAAGATGTACAGAAGACTGACAACAGGCCAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302313.10
ENST00000413099.6
ENST00000420940.6
3UTR TCA 90 bp TTCAAAGTGCAGGTGGCAATGGCCTGTCCAGTTTCCAAAAGAAGCTaGCTAGCAGTGAGGGAACCCTGTCTCTGCAGTTGTGCGATCAGA +
Preference number: 1 (lower is better)
Translates to: FKVQVAMACPVSKRS*LAVREPCLCSCAIR
Trigger: TCTGATCGCACAACTGCAGAGACAGGGTTCCCTCACTGCTAGTCAGCTTCTTTTGGAAACTGGACAGGCCATTGCCACCTGCACTTTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
3UTR GCA 90 bp GCCCAAACACCTTCATCATGGACTCGGTATGTTGCTATACATCTCTaGTGGCCAAGGGACCAAAGGCGAATTGTCCCATCAGAACTGCCT +
Preference number: 1 (lower is better)
Translates to: AQTPSSWTRYVAIHL*WPRDQRRIVPSELP
Trigger: AGGCAGTTCTGATGGGACAATTCGCCTTTGGTCCCTTGGCCAGCAGAGATGTATAGCAACATACCGAGTCCATGATGAAGGTGTTTGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
3UTR GCA 90 bp ATTGACTTGCAGCGCCCAAACACCTTCATCATGGACTCGGTATGTTaGTATACATCTCTGCTGGCCAAGGGACCAAAGGCGAATTGTCCC +
Preference number: 1 (lower is better)
Translates to: IDLQRPNTFIMDSVC*YTSLLAKGPKANCP
Trigger: GGGACAATTCGCCTTTGGTCCCTTGGCCAGCAGAGATGTATAGCAACATACCGAGTCCATGATGAAGGTGTTTGGGCGCTGCAAGTCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
3UTR CCA 90 bp GAACAGTGTGCGACCTCCAGCTTCACCAAAGATCACGGGTGTATGTaGGGGCACTTGAAAATATCCATTTCCCTTCTGCACTCGGTTCTC +
Preference number: 1 (lower is better)
Translates to: EQCATSSFTKDHGCM*GHLKISISLLHSVL
Trigger: GAGAACCGAGTGCAGAAGGGAAATGGATATTTTCAAGTGCCCCCACATACACCCGTGATCTTTGGTGAAGCTGGAGGTCGCACACTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
3UTR TCA 90 bp CTAGGCATGGGCTGCACAAACTCCGGCCCAACAGTCCAAGTGCTATaGTCCAGCACCTGGAATTTCAACAGATCTTCCTACAAGAACACA +
Preference number: 1 (lower is better)
Translates to: LGMGCTNSGPTVQVL*SSTWNFNRSSYKNT
Trigger: TGTGTTCTTGTAGGAAGATCTGTTGAAATTCCAGGTGCTGGATCATAGCACTTGGACTGTTGGGCCGGAGTTTGTGCAGCCCATGCCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302313.10
3UTR CCA 90 bp CAAACACCTTCATCATGGACTCGGTATGTTGCTATACATCTCTGCTaGCCAAGGGACCAAAGGCGAATTGTCCCATCAGAACTGCCTGAC +
Preference number: 1 (lower is better)
Translates to: QTPSSWTRYVAIHLC*PRDQRRIVPSELPD
Trigger: GTCAGGCAGTTCTGATGGGACAATTCGCCTTTGGTCCCTTGGCCAGCAGAGATGTATAGCAACATACCGAGTCCATGATGAAGGTGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
3UTR GCA 90 bp GGAAGGAGTGAAACTGCTGCACAAACTCCGGCCCAACAGTCCAAGTaGTATGATCCAGCACCTGGAATTTCAACAGATCTTCCTACAAGA +
Preference number: 1 (lower is better)
Translates to: GRSETAAQTPAQQSK*YDPAPGISTDLPTR
Trigger: TCTTGTAGGAAGATCTGTTGAAATTCCAGGTGCTGGATCATAGCACTTGGACTGTTGGGCCGGAGTTTGTGCAGCAGTTTCACTCCTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420940.6
3UTR GCA 90 bp CTGTCCCTTCCACCAGAATACACATGTGTGAAGGCATCATTGACTTaGAGCGCCCAAACACCTTCATCATGGACTCGGTATGTTGCTATA +
Preference number: 1 (lower is better)
Translates to: LSLPPEYTCVKASLT*SAQTPSSWTRYVAI
Trigger: TATAGCAACATACCGAGTCCATGATGAAGGTGTTTGGGCGCTGCAAGTCAATGATGCCTTCACACATGTGTATTCTGGTGGAAGGGACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
3UTR CCA 90 bp GACATAGTCTGCTTGGGGCTCTTCTGCTCTTGCACTCTGCTTCCCTaGGGACAGCTTAATCTACACATGGAGACTGGTTTCTATATTACA +
Preference number: 1 (lower is better)
Translates to: DIVCLGLFCSCTLLP*GQLNLHMETGFYIT
Trigger: TGTAATATAGAAACCAGTCTCCATGTGTAGATTAAGCTGTCCCCAGGGAAGCAGAGTGCAAGAGCAGAAGAGCCCCAAGCAGACTATGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302313.10
ENST00000413099.6
ENST00000420940.6
3UTR TCA 90 bp TTGGATCCCATACCCGTAACACCTTTTCAGTGGACCCTGATACAATaGTTGTTCCCAGTTGATTCATGGCCAGGCTATAAATGGAATCTT +
Preference number: 1 (lower is better)
Translates to: LDPIPVTPFQWTLIQ*LFPVDSWPGYKWNL
Trigger: AAGATTCCATTTATAGCCTGGCCATGAATCAACTGGGAACAATCATTGTATCAGGGTCCACTGAAAAGGTGTTACGGGTATGGGATCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000413099.6
ENST00000420940.6
ENST00000433841.6
3UTR GCA 90 bp TGCGTGCCATCTCTGTTTAATAGCAATGCCTTCACATTATCCGTGTaGCCTTTAAGCTTCATTAGTTTTGCACATGTTCTTGGATCCCAT +
Preference number: 1 (lower is better)
Translates to: CVPSLFNSNAFTLSV*PLSFISFAHVLGSH
Trigger: ATGGGATCCAAGAACATGTGCAAAACTAATGAAGCTTAAAGGGCACACGGATAATGTGAAGGCATTGCTATTAAACAGAGATGGCACGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
3UTR CCA 90 bp GAATTTGGGCATATTTTTATCCACAGTGATGTCAATTACCCATTGTaGCACTGTTTCATTAAGAAGCATAGACTCAGTCTCACCCCCGGA +
Preference number: 1 (lower is better)
Translates to: EFGHIFIHSDVNYPL*HCFIKKHRLSLTPG
Trigger: TCCGGGGGTGAGACTGAGTCTATGCTTCTTAATGAAACAGTGCCACAATGGGTAATTGACATCACTGTGGATAAAAATATGCCCAAATTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
3UTR GCA 90 bp ATGCTAAGGCCTTTACGTAATCCTTATGTGTCCTTAATGTTGACATaGAAAATCCCTTGTGTGCATTCCATACTTTTACTGTCGTGTCAG +
Preference number: 1 (lower is better)
Translates to: MLRPLRNPYVSLMLT*KIPCVHSILLLSCQ
Trigger: CTGACACGACAGTAAAAGTATGGAATGCACACAAGGGATTTTGCATGTCAACATTAAGGACACATAAGGATTACGTAAAGGCCTTAGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000433841.6
3UTR CCA 90 bp ATATTTGTCTGTCCAACCCAGCTGATGCTACTAGTTCTTTATCCTTaGCATATGCTAAGGCCTTTACGTAATCCTTATGTGTCCTTAATG +
Preference number: 1 (lower is better)
Translates to: IFVCPTQLMLLVLYP*HMLRPLRNPYVSLM
Trigger: CATTAAGGACACATAAGGATTACGTAAAGGCCTTAGCATATGCCAAGGATAAAGAACTAGTAGCATCAGCTGGGTTGGACAGACAAATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000433841.6
3UTR-3UTR GCA 90 bp CACCTCCCTGGGGTTGCCACAAAGCCAGGACATCATGGGAGGTGCAGCATCGCTGGAGGAAGCAAAGTCTaGACTGGCCTGTTGTCAGTC +
Preference number: 2 (lower is better)
Translates to: HLPGVATKPGHHGRCSIAGGSKV*TGLLSV
Trigger: GACTGACAACAGGCCAGTGCAGACTTTGCTTCCTCC...AGCGATGCTGCACCTCCCATGATGTCCTGGCTTTGTGGCAACCCCAGGGAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302313.10
3UTR-3UTR GCA 90 bp GTGGCCACGTCTTTGCTCACTTCTTCAAAGTGCAGGTGGCAATGGCCTGTCCAGGGGCTCTTCTGCTCTTaGACTCTGCTTCCCTGGGGA +
Preference number: 2 (lower is better)
Translates to: VATSLLTSSKCRWQWPVQGLFCS*TLLPWG
Trigger: TCCCCAGGGAAGCAGAGTGCAAGAGCAGAAGAGCCC...CTGGACAGGCCATTGCCACCTGCACTTTGAAGAAGTGAGCAAAGACGTGGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
3UTR-3UTR TCA 90 bp AGGAGTGAAACTGCTGCACCTCCCTGGGGTTGCCACAAAGCCAGGACATCATGGCAGTTGTGGCCCGACTaGGGTGTCTCTAACAAGTGT +
Preference number: 2 (lower is better)
Translates to: RSETAAPPWGCHKARTSWQLWPD*GVSNKC
Trigger: ACACTTGTTAGAGACACCTCAGTCGGGCCACAACTG...CCATGATGTCCTGGCTTTGTGGCAACCCCAGGGAGGTGCAGCAGTTTCACTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302313.10
3UTR-3UTR GCA 90 bp GTCTTGCTCCCGTTGGGGATCAGTGGGCTTCCTAGGACTACTCTTGGGGCCATATCTGCTCTTGCACTCTaGTTCCCTGGGGACAGCTTA +
Preference number: 2 (lower is better)
Translates to: VLLPLGISGLPRTTLGAISALAL*FPGDSL
Trigger: TAAGCTGTCCCCAGGGAAGCAGAGTGCAAGAGCAGA...TATGGCCCCAAGAGTAGTCCTAGGAAGCCCACTGATCCCCAACGGGAGCAAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302313.10
ENST00000413099.6
ENST00000420940.6
3UTR-3UTR CCA 90 bp GGTGCAGCATCGCTAGGCATGGGCTGCACAAACTCCGGCCCAACAGTCCAAGTGAAGCAAAGTCTGCACTaGCCTGTTGTCAGTCTTCTG +
Preference number: 2 (lower is better)
Translates to: GAASLGMGCTNSGPTVQVKQSLH*PVVSLL
Trigger: CAGAAGACTGACAACAGGCCAGTGCAGACTTTGCTT...CACTTGGACTGTTGGGCCGGAGTTTGTGCAGCCCATGCCTAGCGATGCTGCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302313.10
3UTR CAA 90 bp GCGACCTCCAGCTTCACCAAAGATCACGGGTGTATGTGGGGGCACTaGAAAATATCCATTTCCCTTCTGCACTCGGTTCTCCTGCTCCCC +
Preference number: 2 (lower is better)
Translates to: ATSSFTKDHGCMWGH*KISISLLHSVLLLP
Trigger: GGGGAGCAGGAGAACCGAGTGCAGAAGGGAAATGGATATTTTCAAGTGCCCCCACATACACCCGTGATCTTTGGTGAAGCTGGAGGTCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
3UTR-3UTR TCA 90 bp GTGGCCACGTCTTTGCTCACTTCTTCAAAGTGCAGGTGGCAATGGCCTGTCCAGGAATCAACTGCCCTCTaGAGGCACTTGTGCTTCTGG +
Preference number: 2 (lower is better)
Translates to: VATSLLTSSKCRWQWPVQESTAL*RHLCFW
Trigger: CCAGAAGCACAAGTGCCTTCAGAGGGCAGTTGATTC...CTGGACAGGCCATTGCCACCTGCACTTTGAAGAAGTGAGCAAAGACGTGGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
3UTR-3UTR GCA 90 bp CTTCAAAGTGCAGGTGGCAATGGCCTGTCCAGTTTCCAAAAGAAGCTGACTAGCTCCCTCCCTAGTCCCTaGTATGGTGGAGGCAGGCCA +
Preference number: 2 (lower is better)
Translates to: LQSAGGNGLSSFQKKLTSSLPSP*YGGGRP
Trigger: TGGCCTGCCTCCACCATAGCAGGGACTAGGGAGGGA...GCTAGTCAGCTTCTTTTGGAAACTGGACAGGCCATTGCCACCTGCACTTTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
3UTR-3UTR GCA 90 bp CGTCTTTGCTCACTTCTTCAAAGTGCAGGTGGCAATGGCCTGTCCAGTTTCCAATCGCTAGGCATGGGCTaGACAAACTCCGGCCCAACA +
Preference number: 2 (lower is better)
Translates to: RLCSLLQSAGGNGLSSFQSLGMG*TNSGPT
Trigger: TGTTGGGCCGGAGTTTGTGCAGCCCATGCCTAGCGA...TTGGAAACTGGACAGGCCATTGCCACCTGCACTTTGAAGAAGTGAGCAAAGACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302313.10
3UTR-3UTR CCA 90 bp GTCTTGCTCCCGTTGGGGATCAGTGGGCTTCCTAGGACTACTCTTGGGGCCATAAAGCAAAGTCTGCACTaGCCTGTTGTCAGTCTTCTG +
Preference number: 2 (lower is better)
Translates to: VLLPLGISGLPRTTLGAIKQSLH*PVVSLL
Trigger: CAGAAGACTGACAACAGGCCAGTGCAGACTTTGCTT...TATGGCCCCAAGAGTAGTCCTAGGAAGCCCACTGATCCCCAACGGGAGCAAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302313.10
ENST00000413099.6
ENST00000420940.6
3UTR CAA 90 bp GGTATGTTGCTATACATCTCTGCTGGCCAAGGGACCAAAGGCGAATaGTCCCATCAGAACTGCCTGACAGGCATTGCGTGCCATCTCTGT +
Preference number: 2 (lower is better)
Translates to: GMLLYISAGQGTKGE*SHQNCLTGIACHLC
Trigger: ACAGAGATGGCACGCAATGCCTGTCAGGCAGTTCTGATGGGACAATTCGCCTTTGGTCCCTTGGCCAGCAGAGATGTATAGCAACATACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
3UTR-3UTR TCA 90 bp ATAGACTCAGTCTCACCCCCGGAATCTCGGCAGAGCAGCCTGAACAGTGTGCGAGTATGTGGGGGCACTTaGAAATATCCATTTCCCTTC +
Preference number: 2 (lower is better)
Translates to: IDSVSPPESRQSSLNSVRVCGGT*KYPFPF
Trigger: GAAGGGAAATGGATATTTTCAAGTGCCCCCACATAC...TCGCACACTGTTCAGGCTGCTCTGCCGAGATTCCGGGGGTGAGACTGAGTCTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
3UTR-3UTR TCA 90 bp AGGCTTAGCACACAGGGCAAAATGACCCAGCAAAACCCATTTCTTTGCTCAAAGGACGGTAATGGAGGGTaGGGTCTCCACCGCTCTTCC +
Preference number: 2 (lower is better)
Translates to: RLSTQGKMTQQNPFLCSKDGNGG*GLHRSS
Trigger: GGAAGAGCGGTGGAGACCTCACCCTCCATTACCGTC...CTTTGAGCAAAGAAATGGGTTTTGCTGGGTCATTTTGCCCTGTGTGCTAAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420940.6
3UTR-3UTR GCA 90 bp GTCATGCTGCTCATCCAGAGCAAGAACCTGTGGTCTCAGCTCGCTTTGTGTAAATGCTTGGGGCTCTTCTaGTCTTGCACTCTGCTTCCC +
Preference number: 2 (lower is better)
Translates to: VMLLIQSKNLWSQLALCKCLGLF*SCTLLP
Trigger: GGGAAGCAGAGTGCAAGAGCAGAAGAGCCCCAAGCA...TTTACACAAAGCGAGCTGAGACCACAGGTTCTTGCTCTGGATGAGCAGCATGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
3UTR-3UTR GCA 90 bp CTTCAAAGTGCAGGTGGCAATGGCCTGTCCAGTTTCCAAAAGAAGCTGACTAGCTTGTCCCATCAGAACTaGCTGACAGGCATTGCGTGC +
Preference number: 2 (lower is better)
Translates to: LQSAGGNGLSSFQKKLTSLSHQN*LTGIAC
Trigger: GCACGCAATGCCTGTCAGGCAGTTCTGATGGGACAA...GCTAGTCAGCTTCTTTTGGAAACTGGACAGGCCATTGCCACCTGCACTTTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420940.6
3UTR-3UTR TCA 90 bp AGGGACCAAAGGCGAATTGTCCCATCAGAACTGCCTGACAGGCATTGCGTGCCATGGACCCTGATACAATaGTTGTTCCCAGTTGATTCA +
Preference number: 2 (lower is better)
Translates to: RDQRRIVPSELPDRHCVPWTLIQ*LFPVDS
Trigger: TGAATCAACTGGGAACAATCATTGTATCAGGGTCCA...TGGCACGCAATGCCTGTCAGGCAGTTCTGATGGGACAATTCGCCTTTGGTCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
3UTR-3UTR GCA 90 bp ATCAGGGCTGCTGAAACCAGCATCTTTTGCAGAAACCCAGGCAGCAAAACAATCGCCCAACAGTCCAAGTaGTATGATCCAGCACCTGGA +
Preference number: 2 (lower is better)
Translates to: IRAAETSIFCRNPGSKTIAQQSK*YDPAPG
Trigger: TCCAGGTGCTGGATCATAGCACTTGGACTGTTGGGC...GATTGTTTTGCTGCCTGGGTTTCTGCAAAAGATGCTGGTTTCAGCAGCCCTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420940.6
3UTR-3UTR GCA 90 bp GTGGCCACGTCTTTGCTCACTTCTTCAAAGTGCAGGTGGCAATGGCCTGTCCAGATTTTGATGGTGTCATaGTGCTCATCCAGAGCAAGA +
Preference number: 2 (lower is better)
Translates to: VATSLLTSSKCRWQWPVQILMVS*CSSRAR
Trigger: TCTTGCTCTGGATGAGCAGCATGACACCATCAAAAT...CTGGACAGGCCATTGCCACCTGCACTTTGAAGAAGTGAGCAAAGACGTGGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
3UTR-3UTR GCA 90 bp AGGCTTAGCACACAGGGCAAAATGACCCAGCAAAACCCATTTCTTTGCTCAAAGATGACAGGAGGGGAATaGAGCCACCCAAGGCTTAGC +
Preference number: 2 (lower is better)
Translates to: RLSTQGKMTQQNPFLCSKMTGGE*SHPRLS
Trigger: GCTAAGCCTTGGGTGGCTGCATTCCCCTCCTGTCAT...CTTTGAGCAAAGAAATGGGTTTTGCTGGGTCATTTTGCCCTGTGTGCTAAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
3UTR-3UTR CCA 90 bp GTCATGCTGCTCATCCAGAGCAAGAACCTGTGGTCTCAGCTCGCTTTGTGTAAATGCACTCTGCTTCCCTaGGGACAGCTTAATCTACAC +
Preference number: 2 (lower is better)
Translates to: VMLLIQSKNLWSQLALCKCTLLP*GQLNLH
Trigger: GTGTAGATTAAGCTGTCCCCAGGGAAGCAGAGTGCA...TTTACACAAAGCGAGCTGAGACCACAGGTTCTTGCTCTGGATGAGCAGCATGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
3UTR CAA 90 bp CCTGTCCCTTCCACCAGAATACACATGTGTGAAGGCATCATTGACTaGCAGCGCCCAAACACCTTCATCATGGACTCGGTATGTTGCTAT +
Preference number: 2 (lower is better)
Translates to: PVPSTRIHMCEGIID*QRPNTFIMDSVCCY
Trigger: ATAGCAACATACCGAGTCCATGATGAAGGTGTTTGGGCGCTGCAAGTCAATGATGCCTTCACACATGTGTATTCTGGTGGAAGGGACAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
3UTR-3UTR TCA 90 bp AAGAAGCTGACTAGCAGTGAGGGAACCCTGTCTCTGCAGTTGTGCGATCAGAGTGAGGAAGGTCGTAAATaGATATCCAGGAGCATTAGC +
Preference number: 2 (lower is better)
Translates to: KKLTSSEGTLSLQLCDQSEEGRK*ISRSIS
Trigger: GCTAATGCTCCTGGATATTCATTTACGACCTTCCTC...ACTCTGATCGCACAACTGCAGAGACAGGGTTCCCTCACTGCTAGTCAGCTTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
3UTR-3UTR TCA 90 bp GTGGCCACGTCTTTGCTCACTTCTTCAAAGTGCAGGTGGCAATGGCCTGTCCAGGTAGATAAGGTCCTTTaGAACAAAAGGAGGAAGCAA +
Preference number: 2 (lower is better)
Translates to: VATSLLTSSKCRWQWPVQVDKVL*NKRRKQ
Trigger: TTGCTTCCTCCTTTTGTTTCAAAGGACCTTATCTAC...CTGGACAGGCCATTGCCACCTGCACTTTGAAGAAGTGAGCAAAGACGTGGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
3UTR-3UTR TCA 90 bp TCCAGCTTCACCAAAGATCACGGGTGTATGTGGGGGCACTTGAAAATATCCATTGAATCAACTGCCCTCTaGAGGCACTTGTGCTTCTGG +
Preference number: 2 (lower is better)
Translates to: SSFTKDHGCMWGHLKISIESTAL*RHLCFW
Trigger: CCAGAAGCACAAGTGCCTTCAGAGGGCAGTTGATTC...AATGGATATTTTCAAGTGCCCCCACATACACCCGTGATCTTTGGTGAAGCTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420940.6
3UTR-3UTR TCA 90 bp TCCAGCTTCACCAAAGATCACGGGTGTATGTGGGGGCACTTGAAAATATCCATTACCCATCAGGGCTGCTaGAACCAGCATCTTTTGCAG +
Preference number: 2 (lower is better)
Translates to: SSFTKDHGCMWGHLKISITHQGC*NQHLLQ
Trigger: CTGCAAAAGATGCTGGTTTCAGCAGCCCTGATGGGT...AATGGATATTTTCAAGTGCCCCCACATACACCCGTGATCTTTGGTGAAGCTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
3UTR-3UTR GCA 90 bp CCAAGGCTTAGCACACAGGGCAAAATGACCCAGCAAAACCCATTTCTTTGCTCAAGGGAACCCTGTCTCTaGAGTTGTGCGATCAGAGTA +
Preference number: 2 (lower is better)
Translates to: PRLSTQGKMTQQNPFLCSREPCL*SCAIRV
Trigger: TACTCTGATCGCACAACTGCAGAGACAGGGTTCCCT...TGAGCAAAGAAATGGGTTTTGCTGGGTCATTTTGCCCTGTGTGCTAAGCCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
3UTR-3UTR GCA 90 bp GTCATGCTGCTCATCCAGAGCAAGAACCTGTGGTCTCAGCTCGCTTTGTGTAAAATGGACTCGGTATGTTaGTATACATCTCTGCTGGCC +
Preference number: 2 (lower is better)
Translates to: VMLLIQSKNLWSQLALCKMDSVC*YTSLLA
Trigger: GGCCAGCAGAGATGTATAGCAACATACCGAGTCCAT...TTTACACAAAGCGAGCTGAGACCACAGGTTCTTGCTCTGGATGAGCAGCATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420940.6
3UTR-3UTR CCA 90 bp AGCAGTGAGGGAACCCTGTCTCTGCAGTTGTGCGATCAGAGTATCTTAAATAGTAAGTCTTGCTCCCGTTaGGGATCAGTGGGCTTCCTA +
Preference number: 2 (lower is better)
Translates to: SSEGTLSLQLCDQSILNSKSCSR*GSVGFL
Trigger: TAGGAAGCCCACTGATCCCCAACGGGAGCAAGACTT...ACTATTTAAGATACTCTGATCGCACAACTGCAGAGACAGGGTTCCCTCACTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
3UTR-3UTR CCA 90 bp CTTCAAAGTGCAGGTGGCAATGGCCTGTCCAGTTTCCAAAAGAAGCTGACTAGCTCTTCAAAGTGCAGGTaGCAATGGCCTGTCCAGTTT +
Preference number: 2 (lower is better)
Translates to: LQSAGGNGLSSFQKKLTSSSKCR*QWPVQF
Trigger: AAACTGGACAGGCCATTGCCACCTGCACTTTGAAGA...GCTAGTCAGCTTCTTTTGGAAACTGGACAGGCCATTGCCACCTGCACTTTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
3UTR-3UTR CCA 90 bp GTCTTGCTCCCGTTGGGGATCAGTGGGCTTCCTAGGACTACTCTTGGGGCCATAAACTTATTAGAAATGTaGCCACGTCTTTGCTCACTT +
Preference number: 2 (lower is better)
Translates to: VLLPLGISGLPRTTLGAINLLEM*PRLCSL
Trigger: AAGTGAGCAAAGACGTGGCCACATTTCTAATAAGTT...TATGGCCCCAAGAGTAGTCCTAGGAAGCCCACTGATCCCCAACGGGAGCAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
3UTR-3UTR CCA 90 bp AGGCTTAGCACACAGGGCAAAATGACCCAGCAAAACCCATTTCTTTGCTCAAAGGCTATACATCTCTGCTaGCCAAGGGACCAAAGGCGA +
Preference number: 2 (lower is better)
Translates to: RLSTQGKMTQQNPFLCSKAIHLC*PRDQRR
Trigger: TCGCCTTTGGTCCCTTGGCCAGCAGAGATGTATAGC...CTTTGAGCAAAGAAATGGGTTTTGCTGGGTCATTTTGCCCTGTGTGCTAAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420940.6
3UTR CAA 90 bp ATCTTCCTGTCCCTTCCACCAGAATACACATGTGTGAAGGCATCATaGACTTGCAGCGCCCAAACACCTTCATCATGGACTCGGTATGTT +
Preference number: 2 (lower is better)
Translates to: IFLSLPPEYTCVKAS*TCSAQTPSSWTRYV
Trigger: AACATACCGAGTCCATGATGAAGGTGTTTGGGCGCTGCAAGTCAATGATGCCTTCACACATGTGTATTCTGGTGGAAGGGACAGGAAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
3UTR-3UTR TCA 90 bp TTCCAAAAGAAGCTGACTAGCAGTGAGGGAACCCTGTCTCTGCAGTTGTGCGATGAGGAAGGTCGTAAATaGATATCCAGGAGCATTAGC +
Preference number: 2 (lower is better)
Translates to: FQKKLTSSEGTLSLQLCDEEGRK*ISRSIS
Trigger: GCTAATGCTCCTGGATATTCATTTACGACCTTCCTC...ATCGCACAACTGCAGAGACAGGGTTCCCTCACTGCTAGTCAGCTTCTTTTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
3UTR-3UTR TCA 90 bp ATAAACATGTTCCATAACTTTTCGGACTTGGAGCATGTCACTAGCAGAGAGTCTCCCATCAGAACTGCCTaGCAGGCATTGCGTGCCATC +
Preference number: 2 (lower is better)
Translates to: INMFHNFSDLEHVTSRESPIRTA*QALRAI
Trigger: GATGGCACGCAATGCCTGTCAGGCAGTTCTGATGGG...AGACTCTCTGCTAGTGACATGCTCCAAGTCCGAAAAGTTATGGAACATGTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
3UTR-3UTR GCA 90 bp GCTTTTTCTTCACAAATTAGCACCCGAATGTCAGGGTTTCTTAGGTCTGTACAAGGGCTCTTCTGCTCTTaGACTCTGCTTCCCTGGGGA +
Preference number: 2 (lower is better)
Translates to: AFSSQISTRMSGFLRSVQGLFCS*TLLPWG
Trigger: TCCCCAGGGAAGCAGAGTGCAAGAGCAGAAGAGCCC...TTGTACAGACCTAAGAAACCCTGACATTCGGGTGCTAATTTGTGAAGAAAAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
3UTR-3UTR GCA 90 bp GTCATGCTGCTCATCCAGAGCAAGAACCTGTGGTCTCAGCTCGCTTTGTGTAAATTGAAAGACATAGTCTaGTTGGGGCTCTTCTGCTCT +
Preference number: 2 (lower is better)
Translates to: VMLLIQSKNLWSQLALCKLKDIV*LGLFCS
Trigger: AGAGCAGAAGAGCCCCAAGCAGACTATGTCTTTCAA...TTTACACAAAGCGAGCTGAGACCACAGGTTCTTGCTCTGGATGAGCAGCATGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
3UTR-3UTR GCA 90 bp AGGCTTGTCTTACAGTTTTATGGGGGTGGACCACTGATTTACTCTGAATACAAAGGACATCATGGGAGGTaGAGCATCGCTAGGCATGGG +
Preference number: 2 (lower is better)
Translates to: RLVLQFYGGGPLIYSEYKGHHGR*SIARHG
Trigger: CCCATGCCTAGCGATGCTGCACCTCCCATGATGTCC...TTTGTATTCAGAGTAAATCAGTGGTCCACCCCCATAAAACTGTAAGACAAGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302313.10
3UTR-3UTR CCA 90 bp TCTTCATCCATTGGATTCACATGTGTTCTAGGCCAATATTCCAGGAGTGCTTGGAAGTCTTGCTCCCGTTaGGGATCAGTGGGCTTCCTA +
Preference number: 2 (lower is better)
Translates to: SSSIGFTCVLGQYSRSAWKSCSR*GSVGFL
Trigger: TAGGAAGCCCACTGATCCCCAACGGGAGCAAGACTT...CCAAGCACTCCTGGAATATTGGCCTAGAACACATGTGAATCCAATGGATGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
3UTR-3UTR CCA 90 bp TGGCCAAGGGACCAAAGGCGAATTGTCCCATCAGAACTGCCTGACAGGCATTGCCTAGTTCTTTATCCTTaGCATATGCTAAGGCCTTTA +
Preference number: 2 (lower is better)
Translates to: WPRDQRRIVPSELPDRHCLVLYP*HMLRPL
Trigger: TAAAGGCCTTAGCATATGCCAAGGATAAAGAACTAG...GCAATGCCTGTCAGGCAGTTCTGATGGGACAATTCGCCTTTGGTCCCTTGGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413099.6
3UTR-3UTR TCA 90 bp TTCCAAAAGAAGCTGACTAGCAGTGAGGGAACCCTGTCTCTGCAGTTGTGCGATATGGGGGTGGACCACTaGTTTACTCTGAATACAAAT +
Preference number: 2 (lower is better)
Translates to: FQKKLTSSEGTLSLQLCDMGVDH*FTLNTN
Trigger: ATTTGTATTCAGAGTAAATCAGTGGTCCACCCCCAT...ATCGCACAACTGCAGAGACAGGGTTCCCTCACTGCTAGTCAGCTTCTTTTGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
3UTR-3UTR GCA 90 bp CTTCACAAATTAGCACCCGAATGTCAGGGTTTCTTAGGTCTGTACAATAAATCTGGGCTCTTCTGCTCTTaGACTCTGCTTCCCTGGGGA +
Preference number: 2 (lower is better)
Translates to: LHKLAPECQGFLGLYNKSGLFCS*TLLPWG
Trigger: TCCCCAGGGAAGCAGAGTGCAAGAGCAGAAGAGCCC...AGATTTATTGTACAGACCTAAGAAACCCTGACATTCGGGTGCTAATTTGTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
3UTR-3UTR GCA 90 bp GGACAGCTTAATCTACACATGGAGACTGGTTTCTATATTACATCTCGATTAGTCGCACCTCCCTGGGGTTaGCACAAAGCCAGGACATCA +
Preference number: 2 (lower is better)
Translates to: GQLNLHMETGFYITSRLVAPPWG*HKARTS
Trigger: TGATGTCCTGGCTTTGTGGCAACCCCAGGGAGGTGC...GACTAATCGAGATGTAATATAGAAACCAGTCTCCATGTGTAGATTAAGCTGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302313.10
3UTR-3UTR GCA 90 bp TCCAGCTTCACCAAAGATCACGGGTGTATGTGGGGGCACTTGAAAATATCCATTTGCACTCGGTTCTCCTaGTCCCCATTTACATGGTTT +
Preference number: 2 (lower is better)
Translates to: SSFTKDHGCMWGHLKISICTRFS*SPFTWF
Trigger: AAACCATGTAAATGGGGAGCAGGAGAACCGAGTGCA...AATGGATATTTTCAAGTGCCCCCACATACACCCGTGATCTTTGGTGAAGCTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
3UTR-3UTR CCA 90 bp AGCAGTGAGGGAACCCTGTCTCTGCAGTTGTGCGATCAGAGTATCTTAAATAGTAAGCAAAGTCTGCACTaGCCTGTTGTCAGTCTTCTG +
Preference number: 2 (lower is better)
Translates to: SSEGTLSLQLCDQSILNSKQSLH*PVVSLL
Trigger: CAGAAGACTGACAACAGGCCAGTGCAGACTTTGCTT...ACTATTTAAGATACTCTGATCGCACAACTGCAGAGACAGGGTTCCCTCACTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
3UTR-3UTR CCA 90 bp AGCAGTGAGGGAACCCTGTCTCTGCAGTTGTGCGATCAGAGTATCTTAAATAGTGATCACGGGTGTATGTaGGGGCACTTGAAAATATCC +
Preference number: 2 (lower is better)
Translates to: SSEGTLSLQLCDQSILNSDHGCM*GHLKIS
Trigger: GGATATTTTCAAGTGCCCCCACATACACCCGTGATC...ACTATTTAAGATACTCTGATCGCACAACTGCAGAGACAGGGTTCCCTCACTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420940.6
3UTR-3UTR TCA 90 bp GGAACCCTGTCTCTGCAGTTGTGCGATCAGAGTATCTTAAATAGTAAGGTATGGACAGTCCAAGTGCTATaGTCCAGCACCTGGAATTTC +
Preference number: 2 (lower is better)
Translates to: GTLSLQLCDQSILNSKVWTVQVL*SSTWNF
Trigger: GAAATTCCAGGTGCTGGATCATAGCACTTGGACTGT...CCATACCTTACTATTTAAGATACTCTGATCGCACAACTGCAGAGACAGGGTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
3UTR-3UTR TCA 90 bp CGTCTTTGCTCACTTCTTCAAAGTGCAGGTGGCAATGGCCTGTCCAGTTTCCAAAACTGTATTACGGTTTaGCTGGAGGGGAAAGAAATA +
Preference number: 2 (lower is better)
Translates to: RLCSLLQSAGGNGLSSFQNCITV*LEGKEI
Trigger: TATTTCTTTCCCCTCCAGTCAAACCGTAATACAGTT...TTGGAAACTGGACAGGCCATTGCCACCTGCACTTTGAAGAAGTGAGCAAAGACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
3UTR-3UTR TCA 90 bp GTTTTGCACATGTTCTTGGATCCCATACCCGTAACACCTTTTCAGTGGACCCTGTGGACCCTGATACAATaGTTGTTCCCAGTTGATTCA +
Preference number: 2 (lower is better)
Translates to: VLHMFLDPIPVTPFQWTLWTLIQ*LFPVDS
Trigger: TGAATCAACTGGGAACAATCATTGTATCAGGGTCCA...CAGGGTCCACTGAAAAGGTGTTACGGGTATGGGATCCAAGAACATGTGCAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000413099.6
ENST00000420940.6
ENST00000433841.6
3UTR-3UTR TCA 90 bp TCTTCATCCATTGGATTCACATGTGTTCTAGGCCAATATTCCAGGAGTGCTTGGAGGAGGAGGATCAGCTaGTCTATCAAGCTCCATCTT +
Preference number: 2 (lower is better)
Translates to: SSSIGFTCVLGQYSRSAWRRRIS*SIKLHL
Trigger: AAGATGGAGCTTGATAGATCAGCTGATCCTCCTCCT...CCAAGCACTCCTGGAATATTGGCCTAGAACACATGTGAATCCAATGGATGAAGA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
3UTR-3UTR GCA 90 bp CCAAGGCTTAGCACACAGGGCAAAATGACCCAGCAAAACCCATTTCTTTGCTCAATTTTGATGGTGTCATaGTGCTCATCCAGAGCAAGA +
Preference number: 2 (lower is better)
Translates to: PRLSTQGKMTQQNPFLCSILMVS*CSSRAR
Trigger: TCTTGCTCTGGATGAGCAGCATGACACCATCAAAAT...TGAGCAAAGAAATGGGTTTTGCTGGGTCATTTTGCCCTGTGTGCTAAGCCTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
3UTR-3UTR CCA 90 bp AAGAAGCTGACTAGCAGTGAGGGAACCCTGTCTCTGCAGTTGTGCGATCAGAGTTCTACACATGGAGACTaGTTTCTATATTACATCTCG +
Preference number: 2 (lower is better)
Translates to: KKLTSSEGTLSLQLCDQSSTHGD*FLYYIS
Trigger: CGAGATGTAATATAGAAACCAGTCTCCATGTGTAGA...ACTCTGATCGCACAACTGCAGAGACAGGGTTCCCTCACTGCTAGTCAGCTTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
3UTR-3UTR TCA 90 bp CGAATTTTCTGGAAACTGTATTACGGTTTGACTGGAGGGGAAAGAAATACAATCCAGTTGTGGCCCGACTaGGGTGTCTCTAACAAGTGT +
Preference number: 2 (lower is better)
Translates to: RIFWKLYYGLTGGERNTIQLWPD*GVSNKC
Trigger: ACACTTGTTAGAGACACCTCAGTCGGGCCACAACTG...GATTGTATTTCTTTCCCCTCCAGTCAAACCGTAATACAGTTTCCAGAAAATTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
3UTR-3UTR TCA 90 bp CCAAGGCTTAGCACACAGGGCAAAATGACCCAGCAAAACCCATTTCTTTGCTCATACTCTGAATACAAATaGCCTTGGGGAGAATCCAAA +
Preference number: 2 (lower is better)
Translates to: PRLSTQGKMTQQNPFLCSYSEYK*PWGESK
Trigger: TTTGGATTCTCCCCAAGGTCATTTGTATTCAGAGTA...TGAGCAAAGAAATGGGTTTTGCTGGGTCATTTTGCCCTGTGTGCTAAGCCTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
3UTR-3UTR TCA 90 bp AGGCTTAGCACACAGGGCAAAATGACCCAGCAAAACCCATTTCTTTGCTCAAAGACCACTGATTTACTCTaGATACAAATGACCTTGGGG +
Preference number: 2 (lower is better)
Translates to: RLSTQGKMTQQNPFLCSKTTDLL*IQMTLG
Trigger: CCCCAAGGTCATTTGTATTCAGAGTAAATCAGTGGT...CTTTGAGCAAAGAAATGGGTTTTGCTGGGTCATTTTGCCCTGTGTGCTAAGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
3UTR-3UTR TCA 90 bp GCTGAAACCAGCATCTTTTGCAGAAACCCAGGCAGCAAAACAATCACTTTCATCCTTTTCAGTGGACCCTaGTACAATGATTGTTCCCAG +
Preference number: 2 (lower is better)
Translates to: AETSIFCRNPGSKTITFILFSGP*YNDCSQ
Trigger: CTGGGAACAATCATTGTATCAGGGTCCACTGAAAAG...GATGAAAGTGATTGTTTTGCTGCCTGGGTTTCTGCAAAAGATGCTGGTTTCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
3UTR-3UTR GCA 90 bp TTGAATTTGGGCATATTTTTATCCACAGTGATGTCAATTACCCATTGTGGCACTTGCTTGGGGCTCTTCTaGTCTTGCACTCTGCTTCCC +
Preference number: 2 (lower is better)
Translates to: LNLGIFLSTVMSITHCGTCLGLF*SCTLLP
Trigger: GGGAAGCAGAGTGCAAGAGCAGAAGAGCCCCAAGCA...AGTGCCACAATGGGTAATTGACATCACTGTGGATAAAAATATGCCCAAATTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
3UTR-3UTR GCA 90 bp TCTTCATCCATTGGATTCACATGTGTTCTAGGCCAATATTCCAGGAGTGCTTGGTTGAAAGACATAGTCTaGTTGGGGCTCTTCTGCTCT +
Preference number: 2 (lower is better)
Translates to: SSSIGFTCVLGQYSRSAWLKDIV*LGLFCS
Trigger: AGAGCAGAAGAGCCCCAAGCAGACTATGTCTTTCAA...CCAAGCACTCCTGGAATATTGGCCTAGAACACATGTGAATCCAATGGATGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
3UTR-3UTR GCA 90 bp GCTCACTTCTTCAAAGTGCAGGTGGCAATGGCCTGTCCAGTTTCCAAAAGAAGCAGAACACATCTGAGATaGAATATTAACAACAAGCCC +
Preference number: 2 (lower is better)
Translates to: AHFFKVQVAMACPVSKRSRTHLR*NINNKP
Trigger: GGGCTTGTTGTTAATATTGCATCTCAGATGTGTTCT...GCTTCTTTTGGAAACTGGACAGGCCATTGCCACCTGCACTTTGAAGAAGTGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
3UTR-3UTR TCA 90 bp GAATTGTCCCATCAGAACTGCCTGACAGGCATTGCGTGCCATCTCTGTTTAATAGTAGATAAGGTCCTTTaGAACAAAAGGAGGAAGCAA +
Preference number: 2 (lower is better)
Translates to: ELSHQNCLTGIACHLCLIVDKVL*NKRRKQ
Trigger: TTGCTTCCTCCTTTTGTTTCAAAGGACCTTATCTAC...TATTAAACAGAGATGGCACGCAATGCCTGTCAGGCAGTTCTGATGGGACAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
3UTR-3UTR GCA 90 bp TTGAATTTGGGCATATTTTTATCCACAGTGATGTCAATTACCCATTGTGGCACTTCTGCTCTTGCACTCTaGTTCCCTGGGGACAGCTTA +
Preference number: 2 (lower is better)
Translates to: LNLGIFLSTVMSITHCGTSALAL*FPGDSL
Trigger: TAAGCTGTCCCCAGGGAAGCAGAGTGCAAGAGCAGA...AGTGCCACAATGGGTAATTGACATCACTGTGGATAAAAATATGCCCAAATTCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
3UTR-3UTR GCA 90 bp GGTGCTTTTTCTTCACAAATTAGCACCCGAATGTCAGGGTTTCTTAGGTCTGTATTGAAAGACATAGTCTaGTTGGGGCTCTTCTGCTCT +
Preference number: 2 (lower is better)
Translates to: GAFSSQISTRMSGFLRSVLKDIV*LGLFCS
Trigger: AGAGCAGAAGAGCCCCAAGCAGACTATGTCTTTCAA...TACAGACCTAAGAAACCCTGACATTCGGGTGCTAATTTGTGAAGAAAAAGCACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
3UTR-3UTR CCA 90 bp CGAATTTTCTGGAAACTGTATTACGGTTTGACTGGAGGGGAAAGAAATACAATCTGCACTCTGCTTCCCTaGGGACAGCTTAATCTACAC +
Preference number: 2 (lower is better)
Translates to: RIFWKLYYGLTGGERNTICTLLP*GQLNLH
Trigger: GTGTAGATTAAGCTGTCCCCAGGGAAGCAGAGTGCA...GATTGTATTTCTTTCCCCTCCAGTCAAACCGTAATACAGTTTCCAGAAAATTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
3UTR-3UTR CCA 90 bp GGACAGCTTAATCTACACATGGAGACTGGTTTCTATATTACATCTCGATTAGTCCAGAGCAAGAACCTGTaGTCTCAGCTCGCTTTGTGT +
Preference number: 2 (lower is better)
Translates to: GQLNLHMETGFYITSRLVQSKNL*SQLALC
Trigger: ACACAAAGCGAGCTGAGACCACAGGTTCTTGCTCTG...GACTAATCGAGATGTAATATAGAAACCAGTCTCCATGTGTAGATTAAGCTGTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
3UTR-3UTR CCA 90 bp CGAATTTTCTGGAAACTGTATTACGGTTTGACTGGAGGGGAAAGAAATACAATCAGGCACTTGTGCTTCTaGCTTCATACAGGAGGCTTG +
Preference number: 2 (lower is better)
Translates to: RIFWKLYYGLTGGERNTIRHLCF*LHTGGL
Trigger: CAAGCCTCCTGTATGAAGCCAGAAGCACAAGTGCCT...GATTGTATTTCTTTCCCCTCCAGTCAAACCGTAATACAGTTTCCAGAAAATTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
3UTR-3UTR CCA 90 bp TCCAGCTTCACCAAAGATCACGGGTGTATGTGGGGGCACTTGAAAATATCCATTTTCCCAGTTGATTCATaGCCAGGCTATAAATGGAAT +
Preference number: 2 (lower is better)
Translates to: SSFTKDHGCMWGHLKISIFPVDS*PGYKWN
Trigger: ATTCCATTTATAGCCTGGCCATGAATCAACTGGGAA...AATGGATATTTTCAAGTGCCCCCACATACACCCGTGATCTTTGGTGAAGCTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
3UTR-3UTR CCA 90 bp GCTGAAACCAGCATCTTTTGCAGAAACCCAGGCAGCAAAACAATCACTTTCATCCCCCCTTTAATAACCTaGTCAGGTTGTGTACAAAGA +
Preference number: 2 (lower is better)
Translates to: AETSIFCRNPGSKTITFIPPLIT*SGCVQR
Trigger: TCTTTGTACACAACCTGACCAGGTTATTAAAGGGGG...GATGAAAGTGATTGTTTTGCTGCCTGGGTTTCTGCAAAAGATGCTGGTTTCAGC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
3UTR-3UTR CCA 90 bp TCTTCATCCATTGGATTCACATGTGTTCTAGGCCAATATTCCAGGAGTGCTTGGCCCCCTTTAATAACCTaGTCAGGTTGTGTACAAAGA +
Preference number: 2 (lower is better)
Translates to: SSSIGFTCVLGQYSRSAWPPLIT*SGCVQR
Trigger: TCTTTGTACACAACCTGACCAGGTTATTAAAGGGGG...CCAAGCACTCCTGGAATATTGGCCTAGAACACATGTGAATCCAATGGATGAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
3UTR-3UTR TCA 90 bp GCTTTTTCTTCACAAATTAGCACCCGAATGTCAGGGTTTCTTAGGTCTGTACAACTTTTCAGTGGACCCTaGTACAATGATTGTTCCCAG +
Preference number: 2 (lower is better)
Translates to: AFSSQISTRMSGFLRSVQLFSGP*YNDCSQ
Trigger: CTGGGAACAATCATTGTATCAGGGTCCACTGAAAAG...TTGTACAGACCTAAGAAACCCTGACATTCGGGTGCTAATTTGTGAAGAAAAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
3UTR-3UTR GCA 90 bp TTTGTTGAATTTGGGCATATTTTTATCCACAGTGATGTCAATTACCCATTGTGGGGAGGAAGCAAAGTCTaGACTGGCCTGTTGTCAGTC +
Preference number: 2 (lower is better)
Translates to: FVEFGHIFIHSDVNYPLWGGSKV*TGLLSV
Trigger: GACTGACAACAGGCCAGTGCAGACTTTGCTTCCTCC...CCACAATGGGTAATTGACATCACTGTGGATAAAAATATGCCCAAATTCAACAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
3UTR-3UTR GCA 90 bp AAAGAAGCTGGTTGCTCTCTGAGGAAGGGAGAAAGACCATTTCAACTTATTAGAATGTGGCCACGTCTTTaGTCACTTCTTCAAAGTGCA +
Preference number: 2 (lower is better)
Translates to: KEAGCSLRKGERPFQLIRMWPRL*SLLQSA
Trigger: TGCACTTTGAAGAAGTGAGCAAAGACGTGGCCACAT...TCTAATAAGTTGAAATGGTCTTTCTCCCTTCCTCAGAGAGCAACCAGCTTCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
3UTR-3UTR GCA 90 bp TTGCACATGTTCTTGGATCCCATACCCGTAACACCTTTTCAGTGGACCCTGATATCCTTAATGTTGACATaGAAAATCCCTTGTGTGCAT +
Preference number: 2 (lower is better)
Translates to: LHMFLDPIPVTPFQWTLISLMLT*KIPCVH
Trigger: ATGCACACAAGGGATTTTGCATGTCAACATTAAGGA...TATCAGGGTCCACTGAAAAGGTGTTACGGGTATGGGATCCAAGAACATGTGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000433841.6
3UTR-3UTR CCA 90 bp TTTGTTGAATTTGGGCATATTTTTATCCACAGTGATGTCAATTACCCATTGTGGAAGTCTTGCTCCCGTTaGGGATCAGTGGGCTTCCTA +
Preference number: 2 (lower is better)
Translates to: FVEFGHIFIHSDVNYPLWKSCSR*GSVGFL
Trigger: TAGGAAGCCCACTGATCCCCAACGGGAGCAAGACTT...CCACAATGGGTAATTGACATCACTGTGGATAAAAATATGCCCAAATTCAACAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
3UTR CAA 90 bp GTTGAATTTGGGCATATTTTTATCCACAGTGATGTCAATTACCCATaGTGGCACTGTTTCATTAAGAAGCATAGACTCAGTCTCACCCCC +
Preference number: 2 (lower is better)
Translates to: VEFGHIFIHSDVNYP*WHCFIKKHRLSLTP
Trigger: GGGGGTGAGACTGAGTCTATGCTTCTTAATGAAACAGTGCCACAATGGGTAATTGACATCACTGTGGATAAAAATATGCCCAAATTCAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
3UTR-3UTR TCA 90 bp AAAGAAGCTGGTTGCTCTCTGAGGAAGGGAGAAAGACCATTTCAACTTATTAGATGGACCCTGATACAATaGTTGTTCCCAGTTGATTCA +
Preference number: 2 (lower is better)
Translates to: KEAGCSLRKGERPFQLIRWTLIQ*LFPVDS
Trigger: TGAATCAACTGGGAACAATCATTGTATCAGGGTCCA...TCTAATAAGTTGAAATGGTCTTTCTCCCTTCCTCAGAGAGCAACCAGCTTCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420940.6
3UTR-3UTR GCA 90 bp GGAACCCTGTCTCTGCAGTTGTGCGATCAGAGTATCTTAAATAGTAAGGTATGGCTGGTTCTCAAATTGTaGAACAGCAAATTCCCATTA +
Preference number: 2 (lower is better)
Translates to: GTLSLQLCDQSILNSKVWLVLKL*NSKFPL
Trigger: TAATGGGAATTTGCTGTTGCACAATTTGAGAACCAG...CCATACCTTACTATTTAAGATACTCTGATCGCACAACTGCAGAGACAGGGTTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
3UTR-3UTR GCA 90 bp TGTCTGTCCAACCCAGCTGATGCTACTAGTTCTTTATCCTTGGCATATGCTAAGTCCTTAATGTTGACATaGAAAATCCCTTGTGTGCAT +
Preference number: 2 (lower is better)
Translates to: CLSNPADATSSLSLAYAKSLMLT*KIPCVH
Trigger: ATGCACACAAGGGATTTTGCATGTCAACATTAAGGA...CTTAGCATATGCCAAGGATAAAGAACTAGTAGCATCAGCTGGGTTGGACAGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000433841.6
3UTR-3UTR CCA 90 bp AACCCAGCTGATGCTACTAGTTCTTTATCCTTGGCATATGCTAAGGCCTTTACGCTAGTTCTTTATCCTTaGCATATGCTAAGGCCTTTA +
Preference number: 2 (lower is better)
Translates to: NPADATSSLSLAYAKAFTLVLYP*HMLRPL
Trigger: TAAAGGCCTTAGCATATGCCAAGGATAAAGAACTAG...CGTAAAGGCCTTAGCATATGCCAAGGATAAAGAACTAGTAGCATCAGCTGGGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000433841.6
3UTR-3UTR CCA 90 bp CCAGCATCTTTTGCAGAAACCCAGGCAGCAAAACAATCACTTTCATCCAAAGTACAAACACCTTCATCATaGACTCGGTATGTTGCTATA +
Preference number: 2 (lower is better)
Translates to: PASFAETQAAKQSLSSKVQTPSS*TRYVAI
Trigger: TATAGCAACATACCGAGTCCATGATGAAGGTGTTTG...TACTTTGGATGAAAGTGATTGTTTTGCTGCCTGGGTTTCTGCAAAAGATGCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
3UTR-3UTR TCA 90 bp CTTATCATTAAGAATGTGGCACTGAATAATACTAGCACCCCCTTTAATAACCTGGAGGAAGGTCGTAAATaGATATCCAGGAGCATTAGC +
Preference number: 2 (lower is better)
Translates to: LIIKNVALNNTSTPFNNLEEGRK*ISRSIS
Trigger: GCTAATGCTCCTGGATATTCATTTACGACCTTCCTC...CAGGTTATTAAAGGGGGTGCTAGTATTATTCAGTGCCACATTCTTAATGATAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
3UTR-3UTR TCA 90 bp CTACACATGGAGACTGGTTTCTATATTACATCTCGATTAGTCACTTCAATTGAAAGGAGGAGGATCAGCTaGTCTATCAAGCTCCATCTT +
Preference number: 2 (lower is better)
Translates to: LHMETGFYITSRLVTSIERRRIS*SIKLHL
Trigger: AAGATGGAGCTTGATAGATCAGCTGATCCTCCTCCT...TTCAATTGAAGTGACTAATCGAGATGTAATATAGAAACCAGTCTCCATGTGTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
3UTR-3UTR GCA 90 bp GGTGCTTTTTCTTCACAAATTAGCACCCGAATGTCAGGGTTTCTTAGGTCTGTAGCAAAATCCCTTGTGTaGATTCCATACTTTTACTGT +
Preference number: 2 (lower is better)
Translates to: GAFSSQISTRMSGFLRSVAKSLV*IPYFYC
Trigger: ACAGTAAAAGTATGGAATGCACACAAGGGATTTTGC...TACAGACCTAAGAAACCCTGACATTCGGGTGCTAATTTGTGAAGAAAAAGCACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000413099.6
3UTR-3UTR CCA 90 bp ATAAACATGTTCCATAACTTTTCGGACTTGGAGCATGTCACTAGCAGAGAGTCTTGGCCAGGCTATAAATaGAATCTTTGTTTCCACTTA +
Preference number: 2 (lower is better)
Translates to: INMFHNFSDLEHVTSRESWPGYK*NLCFHL
Trigger: TAAGTGGAAACAAAGATTCCATTTATAGCCTGGCCA...AGACTCTCTGCTAGTGACATGCTCCAAGTCCGAAAAGTTATGGAACATGTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413099.6
3UTR-3UTR TCA 90 bp CCAGTTGATTCATGGCCAGGCTATAAATGGAATCTTTGTTTCCACTTAAAGAAGTTAAAGAAGAAGTTGTaGCAGTGTTATTTGAGGCAG +
Preference number: 2 (lower is better)
Translates to: PVDSWPGYKWNLCFHLKKLKKKL*QCYLRQ
Trigger: CTGCCTCAAATAACACTGTCACAACTTCTTCTTTAA...CTTCTTTAAGTGGAAACAAAGATTCCATTTATAGCCTGGCCATGAATCAACTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000433841.6
3UTR-3UTR GCA 90 bp AATATTTGTCTGTCCAACCCAGCTGATGCTACTAGTTCTTTATCCTTGGCATATGCAAAATCCCTTGTGTaGATTCCATACTTTTACTGT +
Preference number: 2 (lower is better)
Translates to: NICLSNPADATSSLSLAYAKSLV*IPYFYC
Trigger: ACAGTAAAAGTATGGAATGCACACAAGGGATTTTGC...ATATGCCAAGGATAAAGAACTAGTAGCATCAGCTGGGTTGGACAGACAAATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000433841.6
3UTR-3UTR GCA 90 bp CGAATTTTCTGGAAACTGTATTACGGTTTGACTGGAGGGGAAAGAAATACAATCTTCAATTTTCTCCTCTaGCAACACAGCAATATCTTC +
Preference number: 2 (lower is better)
Translates to: RIFWKLYYGLTGGERNTIFNFLL*QHSNIF
Trigger: GAAGATATTGCTGTGTTGGCAGAGGAGAAAATTGAA...GATTGTATTTCTTTCCCCTCCAGTCAAACCGTAATACAGTTTCCAGAAAATTCG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000420940.6
3UTR-3UTR CCA 90 bp GGACAGCTTAATCTACACATGGAGACTGGTTTCTATATTACATCTCGATTAGTCTCTACACATGGAGACTaGTTTCTATATTACATCTCG +
Preference number: 2 (lower is better)
Translates to: GQLNLHMETGFYITSRLVSTHGD*FLYYIS
Trigger: CGAGATGTAATATAGAAACCAGTCTCCATGTGTAGA...GACTAATCGAGATGTAATATAGAAACCAGTCTCCATGTGTAGATTAAGCTGTCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302313.10
ENST00000413099.6
ENST00000420940.6
3UTR-3UTR GCA 90 bp ATCTTTTGCAGAAACCCAGGCAGCAAAACAATCACTTTCATCCAAAGTAATAGTAGAACACATCTGAGATaGAATATTAACAACAAGCCC +
Preference number: 2 (lower is better)
Translates to: IFCRNPGSKTITFIQSNSRTHLR*NINNKP
Trigger: GGGCTTGTTGTTAATATTGCATCTCAGATGTGTTCT...ACTATTACTTTGGATGAAAGTGATTGTTTTGCTGCCTGGGTTTCTGCAAAAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420940.6
3UTR-3UTR GCA 90 bp ATCTTTTGCAGAAACCCAGGCAGCAAAACAATCACTTTCATCCAAAGTAATAGTCTTCAAAATCCACTTTaGCCAGATCTTCAACTTTAC +
Preference number: 2 (lower is better)
Translates to: IFCRNPGSKTITFIQSNSLQNPL*PDLQLY
Trigger: GTAAAGTTGAAGATCTGGGCAAAGTGGATTTTGAAG...ACTATTACTTTGGATGAAAGTGATTGTTTTGCTGCCTGGGTTTCTGCAAAAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
3UTR GCA 72 bp CCTGGGGTTGCCACAAAGCCAGGACATCATGGGAGGTaGAGCATCGCTAGGCATGGGCTGCACAAACTCCGG +
Preference number: 3 (lower is better)
Translates to: PGVATKPGHHGR*SIARHGLHKLR
Trigger: CCGGAGTTTGTGCAGCCCATGCCTAGCGATGCTGCACCTCCCATGATGTCCTGGCTTTGTGGCAACCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302313.10
3UTR-3UTR CAA 90 bp GTCTTGCTCCCGTTGGGGATCAGTGGGCTTCCTAGGACTACTCTTGGGGCCATAGGGACCAAAGGCGAATaGTCCCATCAGAACTGCCTG +
Preference number: 3 (lower is better)
Translates to: VLLPLGISGLPRTTLGAIGTKGE*SHQNCL
Trigger: CAGGCAGTTCTGATGGGACAATTCGCCTTTGGTCCC...TATGGCCCCAAGAGTAGTCCTAGGAAGCCCACTGATCCCCAACGGGAGCAAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
3UTR-3UTR CAA 90 bp ATAGACTCAGTCTCACCCCCGGAATCTCGGCAGAGCAGCCTGAACAGTGTGCGAGGGACCAAAGGCGAATaGTCCCATCAGAACTGCCTG +
Preference number: 3 (lower is better)
Translates to: IDSVSPPESRQSSLNSVRGTKGE*SHQNCL
Trigger: CAGGCAGTTCTGATGGGACAATTCGCCTTTGGTCCC...TCGCACACTGTTCAGGCTGCTCTGCCGAGATTCCGGGGGTGAGACTGAGTCTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
3UTR-3UTR CAA 90 bp GTGGCCACGTCTTTGCTCACTTCTTCAAAGTGCAGGTGGCAATGGCCTGTCCAGCAGCCGTTAGAAGTCTaGCTCCCGTTGGGGATCAGT +
Preference number: 3 (lower is better)
Translates to: VATSLLTSSKCRWQWPVQQPLEV*LPLGIS
Trigger: ACTGATCCCCAACGGGAGCAAGACTTCTAACGGCTG...CTGGACAGGCCATTGCCACCTGCACTTTGAAGAAGTGAGCAAAGACGTGGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
3UTR TCA 72 bp GCTAGGGAGGCAACTGGACTGGAATCAACTGCCCTCTaGAGGCACTTGTGCTTCTGGCTTCATACAGGAGGC +
Preference number: 3 (lower is better)
Translates to: AREATGLESTAL*RHLCFWLHTGG
Trigger: GCCTCCTGTATGAAGCCAGAAGCACAAGTGCCTTCAGAGGGCAGTTGATTCCAGTCCAGTTGCCTCCCTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
3UTR CCA 72 bp AGGCAGGCCACACACAAGCTAGGGAGGCAACTGGACTaGAATCAACTGCCCTCTGAAGGCACTTGTGCTTCT +
Preference number: 3 (lower is better)
Translates to: RQATHKLGRQLD*NQLPSEGTCAS
Trigger: AGAAGCACAAGTGCCTTCAGAGGGCAGTTGATTCCAGTCCAGTTGCCTCCCTAGCTTGTGTGTGGCCTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
3UTR GCA 72 bp CAGCGCCCAAACACCTTCATCATGGACTCGGTATGTTaGTATACATCTCTGCTGGCCAAGGGACCAAAGGCG +
Preference number: 3 (lower is better)
Translates to: QRPNTFIMDSVC*YTSLLAKGPKA
Trigger: CGCCTTTGGTCCCTTGGCCAGCAGAGATGTATAGCAACATACCGAGTCCATGATGAAGGTGTTTGGGCGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
3UTR TCA 72 bp CAGGTGGCAATGGCCTGTCCAGTTTCCAAAAGAAGCTaGCTAGCAGTGAGGGAACCCTGTCTCTGCAGTTGT +
Preference number: 3 (lower is better)
Translates to: QVAMACPVSKRS*LAVREPCLCSC
Trigger: ACAACTGCAGAGACAGGGTTCCCTCACTGCTAGTCAGCTTCTTTTGGAAACTGGACAGGCCATTGCCACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
3UTR-3UTR CAA 90 bp CCAAGGCTTAGCACACAGGGCAAAATGACCCAGCAAAACCCATTTCTTTGCTCAGAAGTCTTGCTCCCGTaGGGGATCAGTGGGCTTCCT +
Preference number: 3 (lower is better)
Translates to: PRLSTQGKMTQQNPFLCSEVLLP*GISGLP
Trigger: AGGAAGCCCACTGATCCCCAACGGGAGCAAGACTTC...TGAGCAAAGAAATGGGTTTTGCTGGGTCATTTTGCCCTGTGTGCTAAGCCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
3UTR-3UTR CAA 90 bp AGCATAGACTCAGTCTCACCCCCGGAATCTCGGCAGAGCAGCCTGAACAGTGTGCTCCTAAATTCAATTTaGGATCTGACCCATCAGGGC +
Preference number: 3 (lower is better)
Translates to: SIDSVSPPESRQSSLNSVLLNSI*DLTHQG
Trigger: GCCCTGATGGGTCAGATCCAAAATTGAATTTAGGAG...CACACTGTTCAGGCTGCTCTGCCGAGATTCCGGGGGTGAGACTGAGTCTATGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
3UTR-3UTR CAA 90 bp ATAGACTCAGTCTCACCCCCGGAATCTCGGCAGAGCAGCCTGAACAGTGTGCGAAATGATTGTTCCCAGTaGATTCATGGCCAGGCTATA +
Preference number: 3 (lower is better)
Translates to: IDSVSPPESRQSSLNSVRNDCSQ*IHGQAI
Trigger: TATAGCCTGGCCATGAATCAACTGGGAACAATCATT...TCGCACACTGTTCAGGCTGCTCTGCCGAGATTCCGGGGGTGAGACTGAGTCTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
3UTR TCA 72 bp AGGACTACTCTTGGGGCCATAGAGGAAGGTCGTAAATaGATATCCAGGAGCATTAGCCCAGCCTTCACGTGG +
Preference number: 3 (lower is better)
Translates to: RTTLGAIEEGRK*ISRSISPAFTW
Trigger: CCACGTGAAGGCTGGGCTAATGCTCCTGGATATTCATTTACGACCTTCCTCTATGGCCCCAAGAGTAGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
3UTR GCA 72 bp GGCCAAGGGACCAAAGGCGAATTGTCCCATCAGAACTaGCTGACAGGCATTGCGTGCCATCTCTGTTTAATA +
Preference number: 3 (lower is better)
Translates to: GQGTKGELSHQN*LTGIACHLCLI
Trigger: TATTAAACAGAGATGGCACGCAATGCCTGTCAGGCAGTTCTGATGGGACAATTCGCCTTTGGTCCCTTGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
3UTR CCA 72 bp GTGGCCACGTCTTTGCTCACTTCTTCAAAGTGCAGGTaGCAATGGCCTGTCCAGTTTCCAAAAGAAGCTGAC +
Preference number: 3 (lower is better)
Translates to: VATSLLTSSKCR*QWPVQFPKEAD
Trigger: GTCAGCTTCTTTTGGAAACTGGACAGGCCATTGCCACCTGCACTTTGAAGAAGTGAGCAAAGACGTGGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
3UTR-3UTR CAA 90 bp CTTCAAAGTGCAGGTGGCAATGGCCTGTCCAGTTTCCAAAAGAAGCTGACTAGCTTGTTGCAACCCAAATaGCAGGAGGAGGATCAGCTG +
Preference number: 3 (lower is better)
Translates to: LQSAGGNGLSSFQKKLTSLLQPK*QEEDQL
Trigger: CAGCTGATCCTCCTCCTGCAATTTGGGTTGCAACAA...GCTAGTCAGCTTCTTTTGGAAACTGGACAGGCCATTGCCACCTGCACTTTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420940.6
3UTR TCA 72 bp GCTTCACCAAAGATCACGGGTGTATGTGGGGGCACTTaGAAATATCCATTTCCCTTCTGCACTCGGTTCTCC +
Preference number: 3 (lower is better)
Translates to: ASPKITGVCGGT*KYPFPFCTRFS
Trigger: GGAGAACCGAGTGCAGAAGGGAAATGGATATTTTCAAGTGCCCCCACATACACCCGTGATCTTTGGTGAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
3UTR GCA 72 bp CCTTCATCATGGACTCGGTATGTTGCTATACATCTCTaGTGGCCAAGGGACCAAAGGCGAATTGTCCCATCA +
Preference number: 3 (lower is better)
Translates to: PSSWTRYVAIHL*WPRDQRRIVPS
Trigger: TGATGGGACAATTCGCCTTTGGTCCCTTGGCCAGCAGAGATGTATAGCAACATACCGAGTCCATGATGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
3UTR CCA 72 bp GCATCATTGACTTGCAGCGCCCAAACACCTTCATCATaGACTCGGTATGTTGCTATACATCTCTGCTGGCCA +
Preference number: 3 (lower is better)
Translates to: ASLTCSAQTPSS*TRYVAIHLCWP
Trigger: TGGCCAGCAGAGATGTATAGCAACATACCGAGTCCATGATGAAGGTGTTTGGGCGCTGCAAGTCAATGATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
3UTR-3UTR CAA 90 bp GTCATGCTGCTCATCCAGAGCAAGAACCTGTGGTCTCAGCTCGCTTTGTGTAAAACCCTGTCTCTGCAGTaGTGCGATCAGAGTATCTTA +
Preference number: 3 (lower is better)
Translates to: VMLLIQSKNLWSQLALCKTLSLQ*CDQSIL
Trigger: TAAGATACTCTGATCGCACAACTGCAGAGACAGGGT...TTTACACAAAGCGAGCTGAGACCACAGGTTCTTGCTCTGGATGAGCAGCATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
3UTR-3UTR CAA 90 bp AGCATAGACTCAGTCTCACCCCCGGAATCTCGGCAGAGCAGCCTGAACAGTGTGTATGTGTCCTTAATGTaGACATGCAAAATCCCTTGT +
Preference number: 3 (lower is better)
Translates to: SIDSVSPPESRQSSLNSVYVSLM*TCKIPC
Trigger: ACAAGGGATTTTGCATGTCAACATTAAGGACACATA...CACACTGTTCAGGCTGCTCTGCCGAGATTCCGGGGGTGAGACTGAGTCTATGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413099.6
3UTR-3UTR CAA 90 bp ATTAAGAAGCATAGACTCAGTCTCACCCCCGGAATCTCGGCAGAGCAGCCTGAAGTTTTGCACATGTTCTaGGATCCCATACCCGTAACA +
Preference number: 3 (lower is better)
Translates to: IKKHRLSLTPGISAEQPEVLHMF*DPIPVT
Trigger: TGTTACGGGTATGGGATCCAAGAACATGTGCAAAAC...TTCAGGCTGCTCTGCCGAGATTCCGGGGGTGAGACTGAGTCTATGCTTCTTAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
3UTR GCA 72 bp CCACCAGAATACACATGTGTGAAGGCATCATTGACTTaGAGCGCCCAAACACCTTCATCATGGACTCGGTAT +
Preference number: 3 (lower is better)
Translates to: PPEYTCVKASLT*SAQTPSSWTRY
Trigger: ATACCGAGTCCATGATGAAGGTGTTTGGGCGCTGCAAGTCAATGATGCCTTCACACATGTGTATTCTGGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
3UTR CCA 72 bp TCATCATGGACTCGGTATGTTGCTATACATCTCTGCTaGCCAAGGGACCAAAGGCGAATTGTCCCATCAGAA +
Preference number: 3 (lower is better)
Translates to: SSWTRYVAIHLC*PRDQRRIVPSE
Trigger: TTCTGATGGGACAATTCGCCTTTGGTCCCTTGGCCAGCAGAGATGTATAGCAACATACCGAGTCCATGATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
3UTR-3UTR CAA 90 bp GCTTTTTCTTCACAAATTAGCACCCGAATGTCAGGGTTTCTTAGGTCTGTACAAGAAGTCTTGCTCCCGTaGGGGATCAGTGGGCTTCCT +
Preference number: 3 (lower is better)
Translates to: AFSSQISTRMSGFLRSVQEVLLP*GISGLP
Trigger: AGGAAGCCCACTGATCCCCAACGGGAGCAAGACTTC...TTGTACAGACCTAAGAAACCCTGACATTCGGGTGCTAATTTGTGAAGAAAAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
3UTR-3UTR CAA 90 bp AGGCTTAGCACACAGGGCAAAATGACCCAGCAAAACCCATTTCTTTGCTCAAAGGTCTGCACTGGCCTGTaGTCAGTCTTCTGTACATCT +
Preference number: 3 (lower is better)
Translates to: RLSTQGKMTQQNPFLCSKVCTGL*SVFCTS
Trigger: AGATGTACAGAAGACTGACAACAGGCCAGTGCAGAC...CTTTGAGCAAAGAAATGGGTTTTGCTGGGTCATTTTGCCCTGTGTGCTAAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
3UTR-3UTR CAA 90 bp CCAAGGCTTAGCACACAGGGCAAAATGACCCAGCAAAACCCATTTCTTTGCTCAGGGCTGGTTCTCAAATaGTGCAACAGCAAATTCCCA +
Preference number: 3 (lower is better)
Translates to: PRLSTQGKMTQQNPFLCSGLVLK*CNSKFP
Trigger: TGGGAATTTGCTGTTGCACAATTTGAGAACCAGCCC...TGAGCAAAGAAATGGGTTTTGCTGGGTCATTTTGCCCTGTGTGCTAAGCCTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
3UTR-3UTR CAA 90 bp GCTCACTTCTTCAAAGTGCAGGTGGCAATGGCCTGTCCAGTTTCCAAAAGAAGCCTTCATACAGGAGGCTaGTCTTACAGTTTTATGGGG +
Preference number: 3 (lower is better)
Translates to: AHFFKVQVAMACPVSKRSLHTGG*SYSFMG
Trigger: CCCCATAAAACTGTAAGACAAGCCTCCTGTATGAAG...GCTTCTTTTGGAAACTGGACAGGCCATTGCCACCTGCACTTTGAAGAAGTGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
3UTR-3UTR CAA 90 bp TCTTCATCCATTGGATTCACATGTGTTCTAGGCCAATATTCCAGGAGTGCTTGGGAAGGCATCATTGACTaGCAGCGCCCAAACACCTTC +
Preference number: 3 (lower is better)
Translates to: SSSIGFTCVLGQYSRSAWEGIID*QRPNTF
Trigger: GAAGGTGTTTGGGCGCTGCAAGTCAATGATGCCTTC...CCAAGCACTCCTGGAATATTGGCCTAGAACACATGTGAATCCAATGGATGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
3UTR-3UTR CAA 90 bp CGTCTTTGCTCACTTCTTCAAAGTGCAGGTGGCAATGGCCTGTCCAGTTTCCAATTCGAAGGTCCATATTaGGATCCAAAACCTGGTCCT +
Preference number: 3 (lower is better)
Translates to: RLCSLLQSAGGNGLSSFQFEGPY*DPKPGP
Trigger: AGGACCAGGTTTTGGATCCAAATATGGACCTTCGAA...TTGGAAACTGGACAGGCCATTGCCACCTGCACTTTGAAGAAGTGAGCAAAGACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420940.6
3UTR-3UTR CAA 90 bp CGAATTTTCTGGAAACTGTATTACGGTTTGACTGGAGGGGAAAGAAATACAATCGAAGTCTTGCTCCCGTaGGGGATCAGTGGGCTTCCT +
Preference number: 3 (lower is better)
Translates to: RIFWKLYYGLTGGERNTIEVLLP*GISGLP
Trigger: AGGAAGCCCACTGATCCCCAACGGGAGCAAGACTTC...GATTGTATTTCTTTCCCCTCCAGTCAAACCGTAATACAGTTTCCAGAAAATTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
3UTR-3UTR CAA 90 bp ATACTAGCACCCCCTTTAATAACCTGGTCAGGTTGTGTACAAAGAGGTGTTATACAGCCGTTAGAAGTCTaGCTCCCGTTGGGGATCAGT +
Preference number: 3 (lower is better)
Translates to: ILAPPLITWSGCVQRGVIQPLEV*LPLGIS
Trigger: ACTGATCCCCAACGGGAGCAAGACTTCTAACGGCTG...TATAACACCTCTTTGTACACAACCTGACCAGGTTATTAAAGGGGGTGCTAGTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
3UTR-3UTR CAA 90 bp CGTCTTTGCTCACTTCTTCAAAGTGCAGGTGGCAATGGCCTGTCCAGTTTCCAACAGATTTTTACCCTTTaGGCATTGCAGACTGTCGAA +
Preference number: 3 (lower is better)
Translates to: RLCSLLQSAGGNGLSSFQQIFTL*ALQTVE
Trigger: TTCGACAGTCTGCAATGCCAAAAGGGTAAAAATCTG...TTGGAAACTGGACAGGCCATTGCCACCTGCACTTTGAAGAAGTGAGCAAAGACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
3UTR-3UTR CAA 90 bp GCTCACTTCTTCAAAGTGCAGGTGGCAATGGCCTGTCCAGTTTCCAAAAGAAGCAATGATTGTTCCCAGTaGATTCATGGCCAGGCTATA +
Preference number: 3 (lower is better)
Translates to: AHFFKVQVAMACPVSKRSNDCSQ*IHGQAI
Trigger: TATAGCCTGGCCATGAATCAACTGGGAACAATCATT...GCTTCTTTTGGAAACTGGACAGGCCATTGCCACCTGCACTTTGAAGAAGTGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420940.6
3UTR-3UTR CAA 90 bp CCAAGGCTTAGCACACAGGGCAAAATGACCCAGCAAAACCCATTTCTTTGCTCAGTTTTGCACATGTTCTaGGATCCCATACCCGTAACA +
Preference number: 3 (lower is better)
Translates to: PRLSTQGKMTQQNPFLCSVLHMF*DPIPVT
Trigger: TGTTACGGGTATGGGATCCAAGAACATGTGCAAAAC...TGAGCAAAGAAATGGGTTTTGCTGGGTCATTTTGCCCTGTGTGCTAAGCCTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000420940.6
3UTR-3UTR CAA 90 bp GCTGAAACCAGCATCTTTTGCAGAAACCCAGGCAGCAAAACAATCACTTTCATCCATGGACTCGGTATGTaGCTATACATCTCTGCTGGC +
Preference number: 3 (lower is better)
Translates to: AETSIFCRNPGSKTITFIHGLGM*LYISAG
Trigger: GCCAGCAGAGATGTATAGCAACATACCGAGTCCATG...GATGAAAGTGATTGTTTTGCTGCCTGGGTTTCTGCAAAAGATGCTGGTTTCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
3UTR-3UTR CAA 90 bp GCTCACTTCTTCAAAGTGCAGGTGGCAATGGCCTGTCCAGTTTCCAAAAGAAGCCTATCAAGCTCCATCTaGAGAACTGGTGCTTTTTCT +
Preference number: 3 (lower is better)
Translates to: AHFFKVQVAMACPVSKRSLSSSI*RTGAFS
Trigger: AGAAAAAGCACCAGTTCTCAAGATGGAGCTTGATAG...GCTTCTTTTGGAAACTGGACAGGCCATTGCCACCTGCACTTTGAAGAAGTGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420940.6
3UTR-3UTR CAA 90 bp GAGGGTGAGGTCTCCACCGCTCTTCCATATGAAGTGTTTCACTGTTCGAAGGTCAATAACCTGGTCAGGTaGTGTACAAAGAGGTGTTAT +
Preference number: 3 (lower is better)
Translates to: EGEVSTALPYEVFHCSKVNNLVR*CTKRCY
Trigger: ATAACACCTCTTTGTACACAACCTGACCAGGTTATT...GACCTTCGAACAGTGAAACACTTCATATGGAAGAGCGGTGGAGACCTCACCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
3UTR-3UTR CAA 90 bp AGCAGTGAGGGAACCCTGTCTCTGCAGTTGTGCGATCAGAGTATCTTAAATAGTTGTGTGGGCTTAAAGTaGAAACAGAGACAGTTGTGG +
Preference number: 3 (lower is better)
Translates to: SSEGTLSLQLCDQSILNSCVGLK*KQRQLW
Trigger: CCACAACTGTCTCTGTTTCAACTTTAAGCCCACACA...ACTATTTAAGATACTCTGATCGCACAACTGCAGAGACAGGGTTCCCTCACTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
3UTR TCA 72 bp AGTTGTTGCAACCCAAATTGCAGGAGGAGGATCAGCTaGTCTATCAAGCTCCATCTTGAGAACTGGTGCTTT +
Preference number: 3 (lower is better)
Translates to: SCCNPNCRRRIS*SIKLHLENWCF
Trigger: AAAGCACCAGTTCTCAAGATGGAGCTTGATAGATCAGCTGATCCTCCTCCTGCAATTTGGGTTGCAACAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
3UTR-3UTR CAA 90 bp CCAAGGCTTAGCACACAGGGCAAAATGACCCAGCAAAACCCATTTCTTTGCTCAAAACTGTATTACGGTTaGACTGGAGGGGAAAGAAAT +
Preference number: 3 (lower is better)
Translates to: PRLSTQGKMTQQNPFLCSKLYYG*TGGERN
Trigger: ATTTCTTTCCCCTCCAGTCAAACCGTAATACAGTTT...TGAGCAAAGAAATGGGTTTTGCTGGGTCATTTTGCCCTGTGTGCTAAGCCTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
3UTR-3UTR CAA 90 bp GCACATGTTCTTGGATCCCATACCCGTAACACCTTTTCAGTGGACCCTGATACAGACATGCAAAATCCCTaGTGTGCATTCCATACTTTT +
Preference number: 3 (lower is better)
Translates to: AHVLGSHTRNTFSVDPDTDMQNP*CAFHTF
Trigger: AAAAGTATGGAATGCACACAAGGGATTTTGCATGTC...TGTATCAGGGTCCACTGAAAAGGTGTTACGGGTATGGGATCCAAGAACATGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000433841.6
3UTR-3UTR CAA 90 bp AAGGCATCATTGACTTGCAGCGCCCAAACACCTTCATCATGGACTCGGTATGTTACTAGTTCTTTATCCTaGGCATATGCTAAGGCCTTT +
Preference number: 3 (lower is better)
Translates to: KASLTCSAQTPSSWTRYVTSSLS*AYAKAF
Trigger: AAAGGCCTTAGCATATGCCAAGGATAAAGAACTAGT...AACATACCGAGTCCATGATGAAGGTGTTTGGGCGCTGCAAGTCAATGATGCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413099.6
3UTR-3UTR CAA 90 bp TTGCACATGTTCTTGGATCCCATACCCGTAACACCTTTTCAGTGGACCCTGATAGACATGCAAAATCCCTaGTGTGCATTCCATACTTTT +
Preference number: 3 (lower is better)
Translates to: LHMFLDPIPVTPFQWTLIDMQNP*CAFHTF
Trigger: AAAAGTATGGAATGCACACAAGGGATTTTGCATGTC...TATCAGGGTCCACTGAAAAGGTGTTACGGGTATGGGATCCAAGAACATGTGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000433841.6
3UTR TCA 72 bp ATACCCGTAACACCTTTTCAGTGGACCCTGATACAATaGTTGTTCCCAGTTGATTCATGGCCAGGCTATAAA +
Preference number: 3 (lower is better)
Translates to: IPVTPFQWTLIQ*LFPVDSWPGYK
Trigger: TTTATAGCCTGGCCATGAATCAACTGGGAACAATCATTGTATCAGGGTCCACTGAAAAGGTGTTACGGGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000413099.6
ENST00000420940.6
ENST00000433841.6
3UTR CCA 72 bp TGTCCAACCCAGCTGATGCTACTAGTTCTTTATCCTTaGCATATGCTAAGGCCTTTACGTAATCCTTATGTG +
Preference number: 3 (lower is better)
Translates to: CPTQLMLLVLYP*HMLRPLRNPYV
Trigger: CACATAAGGATTACGTAAAGGCCTTAGCATATGCCAAGGATAAAGAACTAGTAGCATCAGCTGGGTTGGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000433841.6
3UTR-3UTR CAA 90 bp GATCTTCCTACAAGAACACATCTGAGATGCAATATTAACAACAAGCCCAACATTGTCTGCACTGGCCTGTaGTCAGTCTTCTGTACATCT +
Preference number: 3 (lower is better)
Translates to: DLPTRTHLRCNINNKPNIVCTGL*SVFCTS
Trigger: AGATGTACAGAAGACTGACAACAGGCCAGTGCAGAC...AATGTTGGGCTTGTTGTTAATATTGCATCTCAGATGTGTTCTTGTAGGAAGATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
3UTR-3UTR CAA 90 bp ATAAACATGTTCCATAACTTTTCGGACTTGGAGCATGTCACTAGCAGAGAGTCTTGTGTGGGCTTAAAGTaGAAACAGAGACAGTTGTGG +
Preference number: 3 (lower is better)
Translates to: INMFHNFSDLEHVTSRESCVGLK*KQRQLW
Trigger: CCACAACTGTCTCTGTTTCAACTTTAAGCCCACACA...AGACTCTCTGCTAGTGACATGCTCCAAGTCCGAAAAGTTATGGAACATGTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420940.6
3UTR-3UTR CAA 90 bp CGAATTTTCTGGAAACTGTATTACGGTTTGACTGGAGGGGAAAGAAATACAATCTGTATGTGGGGGCACTaGAAAATATCCATTTCCCTT +
Preference number: 3 (lower is better)
Translates to: RIFWKLYYGLTGGERNTICMWGH*KISISL
Trigger: AAGGGAAATGGATATTTTCAAGTGCCCCCACATACA...GATTGTATTTCTTTCCCCTCCAGTCAAACCGTAATACAGTTTCCAGAAAATTCG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000420940.6
3UTR CCA 72 bp TTCACATGTGTTCTAGGCCAATATTCCAGGAGTGCTTaGAGTAAAAGTCCTCCTAAATTCAATTTTGGATCT +
Preference number: 3 (lower is better)
Translates to: FTCVLGQYSRSA*SKSPPKFNFGS
Trigger: AGATCCAAAATTGAATTTAGGAGGACTTTTACTCCAAGCACTCCTGGAATATTGGCCTAGAACACATGTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
3UTR GCA 72 bp CCTTTACGTAATCCTTATGTGTCCTTAATGTTGACATaGAAAATCCCTTGTGTGCATTCCATACTTTTACTG +
Preference number: 3 (lower is better)
Translates to: PLRNPYVSLMLT*KIPCVHSILLL
Trigger: CAGTAAAAGTATGGAATGCACACAAGGGATTTTGCATGTCAACATTAAGGACACATAAGGATTACGTAAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000433841.6
3UTR TCA 72 bp TGGTTTCTATATTACATCTCGATTAGTCACTTCAATTaGAAGATAATCTCGGTCCATACCAATCAGCCGTTA +
Preference number: 3 (lower is better)
Translates to: WFLYYISISHFN*KIISVHTNQPL
Trigger: TAACGGCTGATTGGTATGGACCGAGATTATCTTTCAATTGAAGTGACTAATCGAGATGTAATATAGAAACCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302313.10
ENST00000413099.6
ENST00000420940.6
CDS-3UTR TCA 90 bp GGTGCAGCATCGCTAGGCATGGGCTGCACAAACTCCGGCCCAACAGTCCAAGTGCCCATCAGAACTGCCTaGCAGGCATTGCGTGCCATC +
Preference number: 4 (lower is better)
Translates to: GAASLGMGCTNSGPTVQVPIRTA*QALRAI
Trigger: GATGGCACGCAATGCCTGTCAGGCAGTTCTGATGGG...CACTTGGACTGTTGGGCCGGAGTTTGTGCAGCCCATGCCTAGCGATGCTGCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302313.10
CDS-3UTR GCA 90 bp AGGAGTGAAACTGCTGCACCTCCCTGGGGTTGCCACAAAGCCAGGACATCATGGTCCCTCCCTAGTCCCTaGTATGGTGGAGGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: RSETAAPPWGCHKARTSWSLPSP*YGGGRP
Trigger: TGGCCTGCCTCCACCATAGCAGGGACTAGGGAGGGA...CCATGATGTCCTGGCTTTGTGGCAACCCCAGGGAGGTGCAGCAGTTTCACTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302313.10
CDS-3UTR TCA 90 bp AAGCATAGACTCAGTCTCACCCCCGGAATCTCGGCAGAGCAGCCTGAACAGTGTGACGGTAATGGAGGGTaGGGTCTCCACCGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: KHRLSLTPGISAEQPEQCDGNGG*GLHRSS
Trigger: GGAAGAGCGGTGGAGACCTCACCCTCCATTACCGTC...ACACTGTTCAGGCTGCTCTGCCGAGATTCCGGGGGTGAGACTGAGTCTATGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
CDS-3UTR GCA 90 bp GTCTTGCTCCCGTTGGGGATCAGTGGGCTTCCTAGGACTACTCTTGGGGCCATAGGGCTCTTCTGCTCTTaGACTCTGCTTCCCTGGGGA +
Preference number: 4 (lower is better)
Translates to: VLLPLGISGLPRTTLGAIGLFCS*TLLPWG
Trigger: TCCCCAGGGAAGCAGAGTGCAAGAGCAGAAGAGCCC...TATGGCCCCAAGAGTAGTCCTAGGAAGCCCACTGATCCCCAACGGGAGCAAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302313.10
ENST00000413099.6
ENST00000420940.6
CDS-3UTR TCA 90 bp TGGCCAAGGGACCAAAGGCGAATTGTCCCATCAGAACTGCCTGACAGGCATTGCTGGGGGTCAGATCTATaGCAGGAGGGGAATGCAGCC +
Preference number: 4 (lower is better)
Translates to: WPRDQRRIVPSELPDRHCWGSDL*QEGNAA
Trigger: GGCTGCATTCCCCTCCTGTCATAGATCTGACCCCCA...GCAATGCCTGTCAGGCAGTTCTGATGGGACAATTCGCCTTTGGTCCCTTGGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420940.6
CDS-3UTR CCA 90 bp CACCTCCCTGGGGTTGCCACAAAGCCAGGACATCATGGGAGGTGCAGCATCGCTCAGAGCAAGAACCTGTaGTCTCAGCTCGCTTTGTGT +
Preference number: 4 (lower is better)
Translates to: HLPGVATKPGHHGRCSIAQSKNL*SQLALC
Trigger: ACACAAAGCGAGCTGAGACCACAGGTTCTTGCTCTG...AGCGATGCTGCACCTCCCATGATGTCCTGGCTTTGTGGCAACCCCAGGGAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302313.10
CDS-3UTR TCA 90 bp CACCTCCCTGGGGTTGCCACAAAGCCAGGACATCATGGGAGGTGCAGCATCGCTAGTCTCGACCGGCTGTaGAAAGTCTATTTAGTGCTG +
Preference number: 4 (lower is better)
Translates to: HLPGVATKPGHHGRCSIASLDRL*KVYLVL
Trigger: CAGCACTAAATAGACTTTTCACAGCCGGTCGAGACT...AGCGATGCTGCACCTCCCATGATGTCCTGGCTTTGTGGCAACCCCAGGGAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302313.10
CDS-3UTR GCA 90 bp AGTGAAACTGCTGCACCTCCCTGGGGTTGCCACAAAGCCAGGACATCATGGGAGTTGTCCCATCAGAACTaGCTGACAGGCATTGCGTGC +
Preference number: 4 (lower is better)
Translates to: SETAAPPWGCHKARTSWELSHQN*LTGIAC
Trigger: GCACGCAATGCCTGTCAGGCAGTTCTGATGGGACAA...CTCCCATGATGTCCTGGCTTTGTGGCAACCCCAGGGAGGTGCAGCAGTTTCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302313.10
CDS-3UTR GCA 90 bp CCGTTGGGGATCAGTGGGCTTCCTAGGACTACTCTTGGGGCCATAGAGGAAGGTGGAGGAAGCAAAGTCTaGACTGGCCTGTTGTCAGTC +
Preference number: 4 (lower is better)
Translates to: PLGISGLPRTTLGAIEEGGGSKV*TGLLSV
Trigger: GACTGACAACAGGCCAGTGCAGACTTTGCTTCCTCC...ACCTTCCTCTATGGCCCCAAGAGTAGTCCTAGGAAGCCCACTGATCCCCAACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302313.10
ENST00000413099.6
ENST00000420940.6
CDS-3UTR GCA 90 bp GTCTTGCTCCCGTTGGGGATCAGTGGGCTTCCTAGGACTACTCTTGGGGCCATAGCCCAACAGTCCAAGTaGTATGATCCAGCACCTGGA +
Preference number: 4 (lower is better)
Translates to: VLLPLGISGLPRTTLGAIAQQSK*YDPAPG
Trigger: TCCAGGTGCTGGATCATAGCACTTGGACTGTTGGGC...TATGGCCCCAAGAGTAGTCCTAGGAAGCCCACTGATCCCCAACGGGAGCAAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR GCA 90 bp CTATACATCTCTGCTGGCCAAGGGACCAAAGGCGAATTGTCCCATCAGAACTGCTCCCTCCCTAGTCCCTaGTATGGTGGAGGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: LYISAGQGTKGELSHQNCSLPSP*YGGGRP
Trigger: TGGCCTGCCTCCACCATAGCAGGGACTAGGGAGGGA...GCAGTTCTGATGGGACAATTCGCCTTTGGTCCCTTGGCCAGCAGAGATGTATAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420940.6
CDS-3UTR CCA 90 bp CCGTTGGGGATCAGTGGGCTTCCTAGGACTACTCTTGGGGCCATAGAGGAAGGTGCTATACATCTCTGCTaGCCAAGGGACCAAAGGCGA +
Preference number: 4 (lower is better)
Translates to: PLGISGLPRTTLGAIEEGAIHLC*PRDQRR
Trigger: TCGCCTTTGGTCCCTTGGCCAGCAGAGATGTATAGC...ACCTTCCTCTATGGCCCCAAGAGTAGTCCTAGGAAGCCCACTGATCCCCAACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302313.10
ENST00000413099.6
ENST00000420940.6
CDS-3UTR CCA 90 bp ATAGACTCAGTCTCACCCCCGGAATCTCGGCAGAGCAGCCTGAACAGTGTGCGAAAGTCTTGCTCCCGTTaGGGATCAGTGGGCTTCCTA +
Preference number: 4 (lower is better)
Translates to: IDSVSPPESRQSSLNSVRKSCSR*GSVGFL
Trigger: TAGGAAGCCCACTGATCCCCAACGGGAGCAAGACTT...TCGCACACTGTTCAGGCTGCTCTGCCGAGATTCCGGGGGTGAGACTGAGTCTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
CDS-3UTR TCA 90 bp GGTGCAGCATCGCTAGGCATGGGCTGCACAAACTCCGGCCCAACAGTCCAAGTGCACCGCTCTTCCATATaGAGTGTTTCACTGTTCGAA +
Preference number: 4 (lower is better)
Translates to: GAASLGMGCTNSGPTVQVHRSSI*SVSLFE
Trigger: TTCGAACAGTGAAACACTTCATATGGAAGAGCGGTG...CACTTGGACTGTTGGGCCGGAGTTTGTGCAGCCCATGCCTAGCGATGCTGCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302313.10
CDS-3UTR TCA 90 bp GCTCACTTCTTCAAAGTGCAGGTGGCAATGGCCTGTCCAGTTTCCAAAAGAAGCGACGGTAATGGAGGGTaGGGTCTCCACCGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: AHFFKVQVAMACPVSKRSDGNGG*GLHRSS
Trigger: GGAAGAGCGGTGGAGACCTCACCCTCCATTACCGTC...GCTTCTTTTGGAAACTGGACAGGCCATTGCCACCTGCACTTTGAAGAAGTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR TCA 90 bp AGAGTGTGTGGGCTTAAAGTTGAAACAGAGACAGTTGTGGCCCGACTGAGGTGTGACGGTAATGGAGGGTaGGGTCTCCACCGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: RVCGLKVETETVVARLRCDGNGG*GLHRSS
Trigger: GGAAGAGCGGTGGAGACCTCACCCTCCATTACCGTC...ACACCTCAGTCGGGCCACAACTGTCTCTGTTTCAACTTTAAGCCCACACACTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR TCA 90 bp AAGAAGCTGACTAGCAGTGAGGGAACCCTGTCTCTGCAGTTGTGCGATCAGAGTTGGGGGTCAGATCTATaGCAGGAGGGGAATGCAGCC +
Preference number: 4 (lower is better)
Translates to: KKLTSSEGTLSLQLCDQSWGSDL*QEGNAA
Trigger: GGCTGCATTCCCCTCCTGTCATAGATCTGACCCCCA...ACTCTGATCGCACAACTGCAGAGACAGGGTTCCCTCACTGCTAGTCAGCTTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR GCA 90 bp ATAGACTCAGTCTCACCCCCGGAATCTCGGCAGAGCAGCCTGAACAGTGTGCGAGTTGCTATACATCTCTaGTGGCCAAGGGACCAAAGG +
Preference number: 4 (lower is better)
Translates to: IDSVSPPESRQSSLNSVRVAIHL*WPRDQR
Trigger: CCTTTGGTCCCTTGGCCAGCAGAGATGTATAGCAAC...TCGCACACTGTTCAGGCTGCTCTGCCGAGATTCCGGGGGTGAGACTGAGTCTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
CDS-3UTR GCA 90 bp GTGGCCACGTCTTTGCTCACTTCTTCAAAGTGCAGGTGGCAATGGCCTGTCCAGTCTGCTCTTGCACTCTaGTTCCCTGGGGACAGCTTA +
Preference number: 4 (lower is better)
Translates to: VATSLLTSSKCRWQWPVQSALAL*FPGDSL
Trigger: TAAGCTGTCCCCAGGGAAGCAGAGTGCAAGAGCAGA...CTGGACAGGCCATTGCCACCTGCACTTTGAAGAAGTGAGCAAAGACGTGGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR GCA 90 bp AAGCATAGACTCAGTCTCACCCCCGGAATCTCGGCAGAGCAGCCTGAACAGTGTTCTGCTCTTGCACTCTaGTTCCCTGGGGACAGCTTA +
Preference number: 4 (lower is better)
Translates to: KHRLSLTPGISAEQPEQCSALAL*FPGDSL
Trigger: TAAGCTGTCCCCAGGGAAGCAGAGTGCAAGAGCAGA...ACACTGTTCAGGCTGCTCTGCCGAGATTCCGGGGGTGAGACTGAGTCTATGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
CDS-3UTR CCA 90 bp CCGTTGGGGATCAGTGGGCTTCCTAGGACTACTCTTGGGGCCATAGAGGAAGGTAGGCACTTGTGCTTCTaGCTTCATACAGGAGGCTTG +
Preference number: 4 (lower is better)
Translates to: PLGISGLPRTTLGAIEEGRHLCF*LHTGGL
Trigger: CAAGCCTCCTGTATGAAGCCAGAAGCACAAGTGCCT...ACCTTCCTCTATGGCCCCAAGAGTAGTCCTAGGAAGCCCACTGATCCCCAACGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
3UTR CAA 72 bp CTATACATCTCTGCTGGCCAAGGGACCAAAGGCGAATaGTCCCATCAGAACTGCCTGACAGGCATTGCGTGC +
Preference number: 4 (lower is better)
Translates to: LYISAGQGTKGE*SHQNCLTGIAC
Trigger: GCACGCAATGCCTGTCAGGCAGTTCTGATGGGACAATTCGCCTTTGGTCCCTTGGCCAGCAGAGATGTATAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
3UTR CAA 72 bp GCAGCGCCCAAACACCTTCATCATGGACTCGGTATGTaGCTATACATCTCTGCTGGCCAAGGGACCAAAGGC +
Preference number: 4 (lower is better)
Translates to: AAPKHLHHGLGM*LYISAGQGTKG
Trigger: GCCTTTGGTCCCTTGGCCAGCAGAGATGTATAGCAACATACCGAGTCCATGATGAAGGTGTTTGGGCGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
CDS-3UTR TCA 90 bp CTTCTGACGGTAATGGAGGGTGAGGTCTCCACCGCTCTTCCATATGAAGTGTTTCCCATCAGAACTGCCTaGCAGGCATTGCGTGCCATC +
Preference number: 4 (lower is better)
Translates to: LLTVMEGEVSTALPYEVFPIRTA*QALRAI
Trigger: GATGGCACGCAATGCCTGTCAGGCAGTTCTGATGGG...AAACACTTCATATGGAAGAGCGGTGGAGACCTCACCCTCCATTACCGTCAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
CDS-3UTR GCA 90 bp GTGGCCACGTCTTTGCTCACTTCTTCAAAGTGCAGGTGGCAATGGCCTGTCCAGGTTGCTATACATCTCTaGTGGCCAAGGGACCAAAGG +
Preference number: 4 (lower is better)
Translates to: VATSLLTSSKCRWQWPVQVAIHL*WPRDQR
Trigger: CCTTTGGTCCCTTGGCCAGCAGAGATGTATAGCAAC...CTGGACAGGCCATTGCCACCTGCACTTTGAAGAAGTGAGCAAAGACGTGGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR GCA 90 bp GCATCATTGACTTGCAGCGCCCAAACACCTTCATCATGGACTCGGTATGTTGCTGGGCTCTTCTGCTCTTaGACTCTGCTTCCCTGGGGA +
Preference number: 4 (lower is better)
Translates to: ASLTCSAQTPSSWTRYVAGLFCS*TLLPWG
Trigger: TCCCCAGGGAAGCAGAGTGCAAGAGCAGAAGAGCCC...AGCAACATACCGAGTCCATGATGAAGGTGTTTGGGCGCTGCAAGTCAATGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
CDS-3UTR CCA 90 bp CCGTTGGGGATCAGTGGGCTTCCTAGGACTACTCTTGGGGCCATAGAGGAAGGTGATCACGGGTGTATGTaGGGGCACTTGAAAATATCC +
Preference number: 4 (lower is better)
Translates to: PLGISGLPRTTLGAIEEGDHGCM*GHLKIS
Trigger: GGATATTTTCAAGTGCCCCCACATACACCCGTGATC...ACCTTCCTCTATGGCCCCAAGAGTAGTCCTAGGAAGCCCACTGATCCCCAACGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000302313.10
ENST00000413099.6
ENST00000420940.6
CDS-3UTR CCA 90 bp GGTGCAGCATCGCTAGGCATGGGCTGCACAAACTCCGGCCCAACAGTCCAAGTGATAACTTTTCGGACTTaGAGCATGTCACTAGCAGAG +
Preference number: 4 (lower is better)
Translates to: GAASLGMGCTNSGPTVQVITFRT*SMSLAE
Trigger: CTCTGCTAGTGACATGCTCCAAGTCCGAAAAGTTAT...CACTTGGACTGTTGGGCCGGAGTTTGTGCAGCCCATGCCTAGCGATGCTGCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302313.10
CDS-3UTR TCA 90 bp GCACATGTTCTTGGATCCCATACCCGTAACACCTTTTCAGTGGACCCTGATACACCCATCAGAACTGCCTaGCAGGCATTGCGTGCCATC +
Preference number: 4 (lower is better)
Translates to: AHVLGSHTRNTFSVDPDTPIRTA*QALRAI
Trigger: GATGGCACGCAATGCCTGTCAGGCAGTTCTGATGGG...TGTATCAGGGTCCACTGAAAAGGTGTTACGGGTATGGGATCCAAGAACATGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
CDS-3UTR GCA 90 bp CTATACATCTCTGCTGGCCAAGGGACCAAAGGCGAATTGTCCCATCAGAACTGCTCTGCTCTTGCACTCTaGTTCCCTGGGGACAGCTTA +
Preference number: 4 (lower is better)
Translates to: LYISAGQGTKGELSHQNCSALAL*FPGDSL
Trigger: TAAGCTGTCCCCAGGGAAGCAGAGTGCAAGAGCAGA...GCAGTTCTGATGGGACAATTCGCCTTTGGTCCCTTGGCCAGCAGAGATGTATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
CDS-3UTR GCA 90 bp CTTCTGACGGTAATGGAGGGTGAGGTCTCCACCGCTCTTCCATATGAAGTGTTTTGCTTGGGGCTCTTCTaGTCTTGCACTCTGCTTCCC +
Preference number: 4 (lower is better)
Translates to: LLTVMEGEVSTALPYEVFCLGLF*SCTLLP
Trigger: GGGAAGCAGAGTGCAAGAGCAGAAGAGCCCCAAGCA...AAACACTTCATATGGAAGAGCGGTGGAGACCTCACCCTCCATTACCGTCAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
CDS-3UTR GCA 90 bp GTCTTGCTCCCGTTGGGGATCAGTGGGCTTCCTAGGACTACTCTTGGGGCCATATTGAAAGACATAGTCTaGTTGGGGCTCTTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: VLLPLGISGLPRTTLGAILKDIV*LGLFCS
Trigger: AGAGCAGAAGAGCCCCAAGCAGACTATGTCTTTCAA...TATGGCCCCAAGAGTAGTCCTAGGAAGCCCACTGATCCCCAACGGGAGCAAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302313.10
ENST00000413099.6
ENST00000420940.6
CDS-3UTR GCA 90 bp TTCCAAAAGAAGCTGACTAGCAGTGAGGGAACCCTGTCTCTGCAGTTGTGCGATATGACAGGAGGGGAATaGAGCCACCCAAGGCTTAGC +
Preference number: 4 (lower is better)
Translates to: FQKKLTSSEGTLSLQLCDMTGGE*SHPRLS
Trigger: GCTAAGCCTTGGGTGGCTGCATTCCCCTCCTGTCAT...ATCGCACAACTGCAGAGACAGGGTTCCCTCACTGCTAGTCAGCTTCTTTTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR CCA 90 bp TGGCCAAGGGACCAAAGGCGAATTGTCCCATCAGAACTGCCTGACAGGCATTGCGATCACGGGTGTATGTaGGGGCACTTGAAAATATCC +
Preference number: 4 (lower is better)
Translates to: WPRDQRRIVPSELPDRHCDHGCM*GHLKIS
Trigger: GGATATTTTCAAGTGCCCCCACATACACCCGTGATC...GCAATGCCTGTCAGGCAGTTCTGATGGGACAATTCGCCTTTGGTCCCTTGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
CDS-3UTR CCA 90 bp AAGAAGCTGACTAGCAGTGAGGGAACCCTGTCTCTGCAGTTGTGCGATCAGAGTAGCCCAGCCTTCACGTaGACTTCTGACGGTAATGGA +
Preference number: 4 (lower is better)
Translates to: KKLTSSEGTLSLQLCDQSSPAFT*TSDGNG
Trigger: TCCATTACCGTCAGAAGTCCACGTGAAGGCTGGGCT...ACTCTGATCGCACAACTGCAGAGACAGGGTTCCCTCACTGCTAGTCAGCTTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR TCA 90 bp GTGGCCACGTCTTTGCTCACTTCTTCAAAGTGCAGGTGGCAATGGCCTGTCCAGCTTTTCAGTGGACCCTaGTACAATGATTGTTCCCAG +
Preference number: 4 (lower is better)
Translates to: VATSLLTSSKCRWQWPVQLFSGP*YNDCSQ
Trigger: CTGGGAACAATCATTGTATCAGGGTCCACTGAAAAG...CTGGACAGGCCATTGCCACCTGCACTTTGAAGAAGTGAGCAAAGACGTGGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR TCA 90 bp CCGTTGGGGATCAGTGGGCTTCCTAGGACTACTCTTGGGGCCATAGAGGAAGGTTTAAGAATGTGGCACTaGATAATACTAGCACCCCCT +
Preference number: 4 (lower is better)
Translates to: PLGISGLPRTTLGAIEEGLRMWH*IILAPP
Trigger: AGGGGGTGCTAGTATTATTCAGTGCCACATTCTTAA...ACCTTCCTCTATGGCCCCAAGAGTAGTCCTAGGAAGCCCACTGATCCCCAACGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302313.10
ENST00000413099.6
ENST00000420940.6
CDS-3UTR TCA 90 bp CTTCAAAGTGCAGGTGGCAATGGCCTGTCCAGTTTCCAAAAGAAGCTGACTAGCACCCATCAGGGCTGCTaGAACCAGCATCTTTTGCAG +
Preference number: 4 (lower is better)
Translates to: LQSAGGNGLSSFQKKLTSTHQGC*NQHLLQ
Trigger: CTGCAAAAGATGCTGGTTTCAGCAGCCCTGATGGGT...GCTAGTCAGCTTCTTTTGGAAACTGGACAGGCCATTGCCACCTGCACTTTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR TCA 90 bp AAGCATAGACTCAGTCTCACCCCCGGAATCTCGGCAGAGCAGCCTGAACAGTGTATTCAATTTTGGATCTaGCCCATCAGGGCTGCTGAA +
Preference number: 4 (lower is better)
Translates to: KHRLSLTPGISAEQPEQCIQFWI*PIRAAE
Trigger: TTCAGCAGCCCTGATGGGTCAGATCCAAAATTGAAT...ACACTGTTCAGGCTGCTCTGCCGAGATTCCGGGGGTGAGACTGAGTCTATGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
CDS-3UTR TCA 90 bp AGGAGTGAAACTGCTGCACCTCCCTGGGGTTGCCACAAAGCCAGGACATCATGGATGGGGGTGGACCACTaGTTTACTCTGAATACAAAT +
Preference number: 4 (lower is better)
Translates to: RSETAAPPWGCHKARTSWMGVDH*FTLNTN
Trigger: ATTTGTATTCAGAGTAAATCAGTGGTCCACCCCCAT...CCATGATGTCCTGGCTTTGTGGCAACCCCAGGGAGGTGCAGCAGTTTCACTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302313.10
CDS-3UTR TCA 90 bp AGAGTGTGTGGGCTTAAAGTTGAAACAGAGACAGTTGTGGCCCGACTGAGGTGTGAATCAACTGCCCTCTaGAGGCACTTGTGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: RVCGLKVETETVVARLRCESTAL*RHLCFW
Trigger: CCAGAAGCACAAGTGCCTTCAGAGGGCAGTTGATTC...ACACCTCAGTCGGGCCACAACTGTCTCTGTTTCAACTTTAAGCCCACACACTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR GCA 90 bp ATTAAGAAGCATAGACTCAGTCTCACCCCCGGAATCTCGGCAGAGCAGCCTGAAGTTGCTATACATCTCTaGTGGCCAAGGGACCAAAGG +
Preference number: 4 (lower is better)
Translates to: IKKHRLSLTPGISAEQPEVAIHL*WPRDQR
Trigger: CCTTTGGTCCCTTGGCCAGCAGAGATGTATAGCAAC...TTCAGGCTGCTCTGCCGAGATTCCGGGGGTGAGACTGAGTCTATGCTTCTTAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
CDS-3UTR GCA 90 bp GTCTTGCTCCCGTTGGGGATCAGTGGGCTTCCTAGGACTACTCTTGGGGCCATATGTAGACTTAGTTGTTaGAACCCAAATTGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: VLLPLGISGLPRTTLGAICRLSC*NPNCRR
Trigger: CCTCCTGCAATTTGGGTTGCAACAACTAAGTCTACA...TATGGCCCCAAGAGTAGTCCTAGGAAGCCCACTGATCCCCAACGGGAGCAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302313.10
ENST00000413099.6
ENST00000420940.6
CDS-3UTR GCA 90 bp AGCAGTGAGGGAACCCTGTCTCTGCAGTTGTGCGATCAGAGTATCTTAAATAGTGCACCTCCCTGGGGTTaGCACAAAGCCAGGACATCA +
Preference number: 4 (lower is better)
Translates to: SSEGTLSLQLCDQSILNSAPPWG*HKARTS
Trigger: TGATGTCCTGGCTTTGTGGCAACCCCAGGGAGGTGC...ACTATTTAAGATACTCTGATCGCACAACTGCAGAGACAGGGTTCCCTCACTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302313.10
CDS-3UTR GCA 90 bp GTCTTGCTCCCGTTGGGGATCAGTGGGCTTCCTAGGACTACTCTTGGGGCCATAATTTTGATGGTGTCATaGTGCTCATCCAGAGCAAGA +
Preference number: 4 (lower is better)
Translates to: VLLPLGISGLPRTTLGAIILMVS*CSSRAR
Trigger: TCTTGCTCTGGATGAGCAGCATGACACCATCAAAAT...TATGGCCCCAAGAGTAGTCCTAGGAAGCCCACTGATCCCCAACGGGAGCAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR GCA 90 bp AAGAAGCTGACTAGCAGTGAGGGAACCCTGTCTCTGCAGTTGTGCGATCAGAGTCAAAACCCATTTCTTTaGTCAAAGGCCCCTCGGGCA +
Preference number: 4 (lower is better)
Translates to: KKLTSSEGTLSLQLCDQSQNPFL*SKAPRA
Trigger: TGCCCGAGGGGCCTTTGAGCAAAGAAATGGGTTTTG...ACTCTGATCGCACAACTGCAGAGACAGGGTTCCCTCACTGCTAGTCAGCTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR CCA 90 bp ATAGACTCAGTCTCACCCCCGGAATCTCGGCAGAGCAGCCTGAACAGTGTGCGAATAACTTTTCGGACTTaGAGCATGTCACTAGCAGAG +
Preference number: 4 (lower is better)
Translates to: IDSVSPPESRQSSLNSVRITFRT*SMSLAE
Trigger: CTCTGCTAGTGACATGCTCCAAGTCCGAAAAGTTAT...TCGCACACTGTTCAGGCTGCTCTGCCGAGATTCCGGGGGTGAGACTGAGTCTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
CDS-3UTR CCA 90 bp CCGTTGGGGATCAGTGGGCTTCCTAGGACTACTCTTGGGGCCATAGAGGAAGGTTTTGGATCCAAAACCTaGTCCTGGCACAAAAGTTCA +
Preference number: 4 (lower is better)
Translates to: PLGISGLPRTTLGAIEEGFGSKT*SWHKSS
Trigger: TGAACTTTTGTGCCAGGACCAGGTTTTGGATCCAAA...ACCTTCCTCTATGGCCCCAAGAGTAGTCCTAGGAAGCCCACTGATCCCCAACGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000302313.10
ENST00000413099.6
ENST00000420940.6
CDS-3UTR CCA 90 bp GTGGCCACGTCTTTGCTCACTTCTTCAAAGTGCAGGTGGCAATGGCCTGTCCAGTCGAAGGTCCATATTTaGATCCAAAACCTGGTCCTG +
Preference number: 4 (lower is better)
Translates to: VATSLLTSSKCRWQWPVQSKVHI*IQNLVL
Trigger: CAGGACCAGGTTTTGGATCCAAATATGGACCTTCGA...CTGGACAGGCCATTGCCACCTGCACTTTGAAGAAGTGAGCAAAGACGTGGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR TCA 90 bp GTCTTGCTCCCGTTGGGGATCAGTGGGCTTCCTAGGACTACTCTTGGGGCCATAGTAGATAAGGTCCTTTaGAACAAAAGGAGGAAGCAA +
Preference number: 4 (lower is better)
Translates to: VLLPLGISGLPRTTLGAIVDKVL*NKRRKQ
Trigger: TTGCTTCCTCCTTTTGTTTCAAAGGACCTTATCTAC...TATGGCCCCAAGAGTAGTCCTAGGAAGCCCACTGATCCCCAACGGGAGCAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302313.10
ENST00000413099.6
ENST00000420940.6
CDS-3UTR TCA 90 bp CCAAGGCTTAGCACACAGGGCAAAATGACCCAGCAAAACCCATTTCTTTGCTCACAGTTGTGGCCCGACTaGGGTGTCTCTAACAAGTGT +
Preference number: 4 (lower is better)
Translates to: PRLSTQGKMTQQNPFLCSQLWPD*GVSNKC
Trigger: ACACTTGTTAGAGACACCTCAGTCGGGCCACAACTG...TGAGCAAAGAAATGGGTTTTGCTGGGTCATTTTGCCCTGTGTGCTAAGCCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR GCA 90 bp GGAACCCTGTCTCTGCAGTTGTGCGATCAGAGTATCTTAAATAGTAAGGTATGGCACTTTCCTCCGCCCTaGTGTGTTCTGCCGGTGATG +
Preference number: 4 (lower is better)
Translates to: GTLSLQLCDQSILNSKVWHFPPP*CVLPVM
Trigger: CATCACCGGCAGAACACAGCAGGGCGGAGGAAAGTG...CCATACCTTACTATTTAAGATACTCTGATCGCACAACTGCAGAGACAGGGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR GCA 90 bp ATCAGGGCTGCTGAAACCAGCATCTTTTGCAGAAACCCAGGCAGCAAAACAATCTTGTCCCATCAGAACTaGCTGACAGGCATTGCGTGC +
Preference number: 4 (lower is better)
Translates to: IRAAETSIFCRNPGSKTILSHQN*LTGIAC
Trigger: GCACGCAATGCCTGTCAGGCAGTTCTGATGGGACAA...GATTGTTTTGCTGCCTGGGTTTCTGCAAAAGATGCTGGTTTCAGCAGCCCTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
CDS-3UTR GCA 90 bp GGAACCCTGTCTCTGCAGTTGTGCGATCAGAGTATCTTAAATAGTAAGGTATGGTCGCTAGGCATGGGCTaGACAAACTCCGGCCCAACA +
Preference number: 4 (lower is better)
Translates to: GTLSLQLCDQSILNSKVWSLGMG*TNSGPT
Trigger: TGTTGGGCCGGAGTTTGTGCAGCCCATGCCTAGCGA...CCATACCTTACTATTTAAGATACTCTGATCGCACAACTGCAGAGACAGGGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302313.10
CDS-3UTR GCA 90 bp CTTCAAAGTGCAGGTGGCAATGGCCTGTCCAGTTTCCAAAAGAAGCTGACTAGCCAAAACCCATTTCTTTaGTCAAAGGCCCCTCGGGCA +
Preference number: 4 (lower is better)
Translates to: LQSAGGNGLSSFQKKLTSQNPFL*SKAPRA
Trigger: TGCCCGAGGGGCCTTTGAGCAAAGAAATGGGTTTTG...GCTAGTCAGCTTCTTTTGGAAACTGGACAGGCCATTGCCACCTGCACTTTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR GCA 90 bp CCGTTGGGGATCAGTGGGCTTCCTAGGACTACTCTTGGGGCCATAGAGGAAGGTTTACCCTTTTGGCATTaGAGACTGTCGAATTTTCTG +
Preference number: 4 (lower is better)
Translates to: PLGISGLPRTTLGAIEEGLPFWH*RLSNFL
Trigger: CAGAAAATTCGACAGTCTGCAATGCCAAAAGGGTAA...ACCTTCCTCTATGGCCCCAAGAGTAGTCCTAGGAAGCCCACTGATCCCCAACGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR CCA 90 bp GTCTTGCTCCCGTTGGGGATCAGTGGGCTTCCTAGGACTACTCTTGGGGCCATATTCCCAGTTGATTCATaGCCAGGCTATAAATGGAAT +
Preference number: 4 (lower is better)
Translates to: VLLPLGISGLPRTTLGAIFPVDS*PGYKWN
Trigger: ATTCCATTTATAGCCTGGCCATGAATCAACTGGGAA...TATGGCCCCAAGAGTAGTCCTAGGAAGCCCACTGATCCCCAACGGGAGCAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302313.10
ENST00000413099.6
ENST00000420940.6
CDS-3UTR CCA 90 bp AGCATAGACTCAGTCTCACCCCCGGAATCTCGGCAGAGCAGCCTGAACAGTGTGCAAACACCTTCATCATaGACTCGGTATGTTGCTATA +
Preference number: 4 (lower is better)
Translates to: SIDSVSPPESRQSSLNSVQTPSS*TRYVAI
Trigger: TATAGCAACATACCGAGTCCATGATGAAGGTGTTTG...CACACTGTTCAGGCTGCTCTGCCGAGATTCCGGGGGTGAGACTGAGTCTATGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
CDS-3UTR TCA 90 bp CAGTCAATGCTGTTAGAGTATTCACATCCCAAAGGAATATTTGTCTGTCCAACCGCTGTGTTCTGCCGGTaGTGGGCCGCCATCTTGCAT +
Preference number: 4 (lower is better)
Translates to: QSMLLEYSHPKGIFVCPTAVFCR*WAAILH
Trigger: ATGCAAGATGGCGGCCCATCACCGGCAGAACACAGC...GGTTGGACAGACAAATATTCCTTTGGGATGTGAATACTCTAACAGCATTGACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000413099.6
ENST00000423296.6
ENST00000433841.6
CDS-3UTR TCA 90 bp AGGAGTGAAACTGCTGCACCTCCCTGGGGTTGCCACAAAGCCAGGACATCATGGTTAAAGAAGAAGTTGTaGCAGTGTTATTTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: RSETAAPPWGCHKARTSWLKKKL*QCYLRQ
Trigger: CTGCCTCAAATAACACTGTCACAACTTCTTCTTTAA...CCATGATGTCCTGGCTTTGTGGCAACCCCAGGGAGGTGCAGCAGTTTCACTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302313.10
CDS-3UTR TCA 90 bp TTGCACATGTTCTTGGATCCCATACCCGTAACACCTTTTCAGTGGACCCTGATAACCCATCAGGGCTGCTaGAACCAGCATCTTTTGCAG +
Preference number: 4 (lower is better)
Translates to: LHMFLDPIPVTPFQWTLITHQGC*NQHLLQ
Trigger: CTGCAAAAGATGCTGGTTTCAGCAGCCCTGATGGGT...TATCAGGGTCCACTGAAAAGGTGTTACGGGTATGGGATCCAAGAACATGTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
CDS-3UTR TCA 90 bp GAGGGTGAGGTCTCCACCGCTCTTCCATATGAAGTGTTTCACTGTTCGAAGGTCCACCGCTCTTCCATATaGAGTGTTTCACTGTTCGAA +
Preference number: 4 (lower is better)
Translates to: EGEVSTALPYEVFHCSKVHRSSI*SVSLFE
Trigger: TTCGAACAGTGAAACACTTCATATGGAAGAGCGGTG...GACCTTCGAACAGTGAAACACTTCATATGGAAGAGCGGTGGAGACCTCACCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
CDS-3UTR TCA 90 bp AGCAGTGAGGGAACCCTGTCTCTGCAGTTGTGCGATCAGAGTATCTTAAATAGTCAGTTGTGGCCCGACTaGGGTGTCTCTAACAAGTGT +
Preference number: 4 (lower is better)
Translates to: SSEGTLSLQLCDQSILNSQLWPD*GVSNKC
Trigger: ACACTTGTTAGAGACACCTCAGTCGGGCCACAACTG...ACTATTTAAGATACTCTGATCGCACAACTGCAGAGACAGGGTTCCCTCACTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR TCA 90 bp TGGCCAAGGGACCAAAGGCGAATTGTCCCATCAGAACTGCCTGACAGGCATTGCTACTCTGAATACAAATaGCCTTGGGGAGAATCCAAA +
Preference number: 4 (lower is better)
Translates to: WPRDQRRIVPSELPDRHCYSEYK*PWGESK
Trigger: TTTGGATTCTCCCCAAGGTCATTTGTATTCAGAGTA...GCAATGCCTGTCAGGCAGTTCTGATGGGACAATTCGCCTTTGGTCCCTTGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420940.6
CDS-3UTR TCA 90 bp GAATTGTCCCATCAGAACTGCCTGACAGGCATTGCGTGCCATCTCTGTTTAATAGAATCAACTGCCCTCTaGAGGCACTTGTGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: ELSHQNCLTGIACHLCLIESTAL*RHLCFW
Trigger: CCAGAAGCACAAGTGCCTTCAGAGGGCAGTTGATTC...TATTAAACAGAGATGGCACGCAATGCCTGTCAGGCAGTTCTGATGGGACAATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420940.6
CDS-3UTR TCA 90 bp CTCGGTATGTTGCTATACATCTCTGCTGGCCAAGGGACCAAAGGCGAATTGTCCCCCCAGCCGAACCTGTaGAGATGTAGAAAAGAAAAA +
Preference number: 4 (lower is better)
Translates to: LGMLLYISAGQGTKGELSPQPNL*RCRKEK
Trigger: TTTTTCTTTTCTACATCTTCACAGGTTCGGCTGGGG...GGACAATTCGCCTTTGGTCCCTTGGCCAGCAGAGATGTATAGCAACATACCGAG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000420940.6
CDS-3UTR GCA 90 bp CTTCAAAGTGCAGGTGGCAATGGCCTGTCCAGTTTCCAAAAGAAGCTGACTAGCAGTGCTGGATCCAGCTaGAGAGCATTGACTCCATTT +
Preference number: 4 (lower is better)
Translates to: LQSAGGNGLSSFQKKLTSSAGSS*RALTPF
Trigger: AAATGGAGTCAATGCTCTGCAGCTGGATCCAGCACT...GCTAGTCAGCTTCTTTTGGAAACTGGACAGGCCATTGCCACCTGCACTTTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR GCA 90 bp GCATCATTGACTTGCAGCGCCCAAACACCTTCATCATGGACTCGGTATGTTGCTAAGGCATCATTGACTTaGAGCGCCCAAACACCTTCA +
Preference number: 4 (lower is better)
Translates to: ASLTCSAQTPSSWTRYVAKASLT*SAQTPS
Trigger: TGAAGGTGTTTGGGCGCTGCAAGTCAATGATGCCTT...AGCAACATACCGAGTCCATGATGAAGGTGTTTGGGCGCTGCAAGTCAATGATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
CDS-3UTR GCA 90 bp TTCCAAAAGAAGCTGACTAGCAGTGAGGGAACCCTGTCTCTGCAGTTGTGCGATAAGGCATCATTGACTTaGAGCGCCCAAACACCTTCA +
Preference number: 4 (lower is better)
Translates to: FQKKLTSSEGTLSLQLCDKASLT*SAQTPS
Trigger: TGAAGGTGTTTGGGCGCTGCAAGTCAATGATGCCTT...ATCGCACAACTGCAGAGACAGGGTTCCCTCACTGCTAGTCAGCTTCTTTTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR GCA 90 bp ATAGACTCAGTCTCACCCCCGGAATCTCGGCAGAGCAGCCTGAACAGTGTGCGACTTCAAAATCCACTTTaGCCAGATCTTCAACTTTAC +
Preference number: 4 (lower is better)
Translates to: IDSVSPPESRQSSLNSVRLQNPL*PDLQLY
Trigger: GTAAAGTTGAAGATCTGGGCAAAGTGGATTTTGAAG...TCGCACACTGTTCAGGCTGCTCTGCCGAGATTCCGGGGGTGAGACTGAGTCTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
CDS-3UTR GCA 90 bp GCTGAAACCAGCATCTTTTGCAGAAACCCAGGCAGCAAAACAATCACTTTCATCTGCTTGGGGCTCTTCTaGTCTTGCACTCTGCTTCCC +
Preference number: 4 (lower is better)
Translates to: AETSIFCRNPGSKTITFICLGLF*SCTLLP
Trigger: GGGAAGCAGAGTGCAAGAGCAGAAGAGCCCCAAGCA...GATGAAAGTGATTGTTTTGCTGCCTGGGTTTCTGCAAAAGATGCTGGTTTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
CDS-3UTR GCA 90 bp TCCAGCTTCACCAAAGATCACGGGTGTATGTGGGGGCACTTGAAAATATCCATTGGAGGAAGCAAAGTCTaGACTGGCCTGTTGTCAGTC +
Preference number: 4 (lower is better)
Translates to: SSFTKDHGCMWGHLKISIGGSKV*TGLLSV
Trigger: GACTGACAACAGGCCAGTGCAGACTTTGCTTCCTCC...AATGGATATTTTCAAGTGCCCCCACATACACCCGTGATCTTTGGTGAAGCTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
CDS-3UTR GCA 90 bp CCAAGGCTTAGCACACAGGGCAAAATGACCCAGCAAAACCCATTTCTTTGCTCATGGACTGGAATCAACTaGCCTCTGAAGGCACTTGTG +
Preference number: 4 (lower is better)
Translates to: PRLSTQGKMTQQNPFLCSWTGIN*PLKALV
Trigger: CACAAGTGCCTTCAGAGGGCAGTTGATTCCAGTCCA...TGAGCAAAGAAATGGGTTTTGCTGGGTCATTTTGCCCTGTGTGCTAAGCCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR CCA 90 bp AGTGAAACTGCTGCACCTCCCTGGGGTTGCCACAAAGCCAGGACATCATGGGAGTGCTCCCCATTTACATaGTTTACTTCATTTTCCTCT +
Preference number: 4 (lower is better)
Translates to: SETAAPPWGCHKARTSWECSPFT*FTSFSS
Trigger: AGAGGAAAATGAAGTAAACCATGTAAATGGGGAGCA...CTCCCATGATGTCCTGGCTTTGTGGCAACCCCAGGGAGGTGCAGCAGTTTCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000302313.10
CDS-3UTR CCA 90 bp GTCTTGCTCCCGTTGGGGATCAGTGGGCTTCCTAGGACTACTCTTGGGGCCATATCTACACATGGAGACTaGTTTCTATATTACATCTCG +
Preference number: 4 (lower is better)
Translates to: VLLPLGISGLPRTTLGAISTHGD*FLYYIS
Trigger: CGAGATGTAATATAGAAACCAGTCTCCATGTGTAGA...TATGGCCCCAAGAGTAGTCCTAGGAAGCCCACTGATCCCCAACGGGAGCAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302313.10
ENST00000413099.6
ENST00000420940.6
CDS-3UTR CCA 90 bp CGAATTGTCCCATCAGAACTGCCTGACAGGCATTGCGTGCCATCTCTGTTTAATTGCACTCTGCTTCCCTaGGGACAGCTTAATCTACAC +
Preference number: 4 (lower is better)
Translates to: RIVPSELPDRHCVPSLFNCTLLP*GQLNLH
Trigger: GTGTAGATTAAGCTGTCCCCAGGGAAGCAGAGTGCA...ATTAAACAGAGATGGCACGCAATGCCTGTCAGGCAGTTCTGATGGGACAATTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
CDS-3UTR CCA 90 bp AGGAGTGAAACTGCTGCACCTCCCTGGGGTTGCCACAAAGCCAGGACATCATGGAACTTATTAGAAATGTaGCCACGTCTTTGCTCACTT +
Preference number: 4 (lower is better)
Translates to: RSETAAPPWGCHKARTSWNLLEM*PRLCSL
Trigger: AAGTGAGCAAAGACGTGGCCACATTTCTAATAAGTT...CCATGATGTCCTGGCTTTGTGGCAACCCCAGGGAGGTGCAGCAGTTTCACTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302313.10
3UTR CAA 72 bp TCCACCAGAATACACATGTGTGAAGGCATCATTGACTaGCAGCGCCCAAACACCTTCATCATGGACTCGGTA +
Preference number: 4 (lower is better)
Translates to: STRIHMCEGIID*QRPNTFIMDSV
Trigger: TACCGAGTCCATGATGAAGGTGTTTGGGCGCTGCAAGTCAATGATGCCTTCACACATGTGTATTCTGGTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
CDS-3UTR TCA 90 bp CCAGTTGATTCATGGCCAGGCTATAAATGGAATCTTTGTTTCCACTTAAAGAAGGCTGTGTTCTGCCGGTaGTGGGCCGCCATCTTGCAT +
Preference number: 4 (lower is better)
Translates to: PVDSWPGYKWNLCFHLKKAVFCR*WAAILH
Trigger: ATGCAAGATGGCGGCCCATCACCGGCAGAACACAGC...CTTCTTTAAGTGGAAACAAAGATTCCATTTATAGCCTGGCCATGAATCAACTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000433841.6
CDS-3UTR TCA 90 bp CCATTACAACAGAGTACAATGTCGTTTACCCAATCAGTATGGTGTTCCATAGATGCTGTGTTCTGCCGGTaGTGGGCCGCCATCTTGCAT +
Preference number: 4 (lower is better)
Translates to: PLQQSTMSFTQSVWCSIDAVFCR*WAAILH
Trigger: ATGCAAGATGGCGGCCCATCACCGGCAGAACACAGC...ATCTATGGAACACCATACTGATTGGGTAAACGACATTGTACTCTGTTGTAATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433841.6
CDS-3UTR TCA 90 bp AGGCTTAGCACACAGGGCAAAATGACCCAGCAAAACCCATTTCTTTGCTCAAAGCCAGCTGCAGAGCATTaGCTCCATTTCGGTTGTACT +
Preference number: 4 (lower is better)
Translates to: RLSTQGKMTQQNPFLCSKPAAEH*LHFGCT
Trigger: AGTACAACCGAAATGGAGTCAATGCTCTGCAGCTGG...CTTTGAGCAAAGAAATGGGTTTTGCTGGGTCATTTTGCCCTGTGTGCTAAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR TCA 90 bp CTCTTCATCCATTGGATTCACATGTGTTCTAGGCCAATATTCCAGGAGTGCTTGACCCATCAGGGCTGCTaGAACCAGCATCTTTTGCAG +
Preference number: 4 (lower is better)
Translates to: LFIHWIHMCSRPIFQECLTHQGC*NQHLLQ
Trigger: CTGCAAAAGATGCTGGTTTCAGCAGCCCTGATGGGT...CAAGCACTCCTGGAATATTGGCCTAGAACACATGTGAATCCAATGGATGAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
CDS-3UTR TCA 90 bp CGTCTTTGCTCACTTCTTCAAAGTGCAGGTGGCAATGGCCTGTCCAGTTTCCAAGTATGTGGGGGCACTTaGAAATATCCATTTCCCTTC +
Preference number: 4 (lower is better)
Translates to: RLCSLLQSAGGNGLSSFQVCGGT*KYPFPF
Trigger: GAAGGGAAATGGATATTTTCAAGTGCCCCCACATAC...TTGGAAACTGGACAGGCCATTGCCACCTGCACTTTGAAGAAGTGAGCAAAGACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR TCA 90 bp CTTCAAAGTGCAGGTGGCAATGGCCTGTCCAGTTTCCAAAAGAAGCTGACTAGCGAGGAAGGTCGTAAATaGATATCCAGGAGCATTAGC +
Preference number: 4 (lower is better)
Translates to: LQSAGGNGLSSFQKKLTSEEGRK*ISRSIS
Trigger: GCTAATGCTCCTGGATATTCATTTACGACCTTCCTC...GCTAGTCAGCTTCTTTTGGAAACTGGACAGGCCATTGCCACCTGCACTTTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR TCA 90 bp GAGGGTGAGGTCTCCACCGCTCTTCCATATGAAGTGTTTCACTGTTCGAAGGTCACCACTGATTTACTCTaGATACAAATGACCTTGGGG +
Preference number: 4 (lower is better)
Translates to: EGEVSTALPYEVFHCSKVTTDLL*IQMTLG
Trigger: CCCCAAGGTCATTTGTATTCAGAGTAAATCAGTGGT...GACCTTCGAACAGTGAAACACTTCATATGGAAGAGCGGTGGAGACCTCACCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420940.6
CDS-3UTR TCA 90 bp AGGCTTAGCACACAGGGCAAAATGACCCAGCAAAACCCATTTCTTTGCTCAAAGGTTTCCAAAAGAAGCTaGCTAGCAGTGAGGGAACCC +
Preference number: 4 (lower is better)
Translates to: RLSTQGKMTQQNPFLCSKVSKRS*LAVREP
Trigger: GGGTTCCCTCACTGCTAGTCAGCTTCTTTTGGAAAC...CTTTGAGCAAAGAAATGGGTTTTGCTGGGTCATTTTGCCCTGTGTGCTAAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR TCA 90 bp AGCAGTGAGGGAACCCTGTCTCTGCAGTTGTGCGATCAGAGTATCTTAAATAGTGTTTCCAAAAGAAGCTaGCTAGCAGTGAGGGAACCC +
Preference number: 4 (lower is better)
Translates to: SSEGTLSLQLCDQSILNSVSKRS*LAVREP
Trigger: GGGTTCCCTCACTGCTAGTCAGCTTCTTTTGGAAAC...ACTATTTAAGATACTCTGATCGCACAACTGCAGAGACAGGGTTCCCTCACTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR GCA 90 bp AGGCTTGTCTTACAGTTTTATGGGGGTGGACCACTGATTTACTCTGAATACAAACACTTTCCTCCGCCCTaGTGTGTTCTGCCGGTGATG +
Preference number: 4 (lower is better)
Translates to: RLVLQFYGGGPLIYSEYKHFPPP*CVLPVM
Trigger: CATCACCGGCAGAACACAGCAGGGCGGAGGAAAGTG...TTTGTATTCAGAGTAAATCAGTGGTCCACCCCCATAAAACTGTAAGACAAGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR GCA 90 bp TCAATGCTGTTAGAGTATTCACATCCCAAAGGAATATTTGTCTGTCCAACCCAGCACTTTCCTCCGCCCTaGTGTGTTCTGCCGGTGATG +
Preference number: 4 (lower is better)
Translates to: SMLLEYSHPKGIFVCPTQHFPPP*CVLPVM
Trigger: CATCACCGGCAGAACACAGCAGGGCGGAGGAAAGTG...CTGGGTTGGACAGACAAATATTCCTTTGGGATGTGAATACTCTAACAGCATTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000413099.6
ENST00000423296.6
ENST00000433841.6
CDS-3UTR GCA 90 bp GCAGTCAATGCTGTTAGAGTATTCACATCCCAAAGGAATATTTGTCTGTCCAACCACTTTCCTCCGCCCTaGTGTGTTCTGCCGGTGATG +
Preference number: 4 (lower is better)
Translates to: AVNAVRVFTSQRNICLSNHFPPP*CVLPVM
Trigger: CATCACCGGCAGAACACAGCAGGGCGGAGGAAAGTG...GTTGGACAGACAAATATTCCTTTGGGATGTGAATACTCTAACAGCATTGACTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000413099.6
ENST00000423296.6
ENST00000433841.6
CDS-3UTR GCA 90 bp TATGTTGCTATACATCTCTGCTGGCCAAGGGACCAAAGGCGAATTGTCCCATCAAGTGCTGGATCCAGCTaGAGAGCATTGACTCCATTT +
Preference number: 4 (lower is better)
Translates to: YVAIHLCWPRDQRRIVPSSAGSS*RALTPF
Trigger: AAATGGAGTCAATGCTCTGCAGCTGGATCCAGCACT...TGATGGGACAATTCGCCTTTGGTCCCTTGGCCAGCAGAGATGTATAGCAACATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
CDS-3UTR GCA 90 bp GTGGCCACGTCTTTGCTCACTTCTTCAAAGTGCAGGTGGCAATGGCCTGTCCAGTCCTTAATGTTGACATaGAAAATCCCTTGTGTGCAT +
Preference number: 4 (lower is better)
Translates to: VATSLLTSSKCRWQWPVQSLMLT*KIPCVH
Trigger: ATGCACACAAGGGATTTTGCATGTCAACATTAAGGA...CTGGACAGGCCATTGCCACCTGCACTTTGAAGAAGTGAGCAAAGACGTGGCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR GCA 90 bp ATCAGGGCTGCTGAAACCAGCATCTTTTGCAGAAACCCAGGCAGCAAAACAATCATGGACTCGGTATGTTaGTATACATCTCTGCTGGCC +
Preference number: 4 (lower is better)
Translates to: IRAAETSIFCRNPGSKTIMDSVC*YTSLLA
Trigger: GGCCAGCAGAGATGTATAGCAACATACCGAGTCCAT...GATTGTTTTGCTGCCTGGGTTTCTGCAAAAGATGCTGGTTTCAGCAGCCCTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
CDS-3UTR GCA 90 bp AGGCTTAGCACACAGGGCAAAATGACCCAGCAAAACCCATTTCTTTGCTCAAAGTATCCATTTCCCTTCTaGACTCGGTTCTCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: RLSTQGKMTQQNPFLCSKYPFPF*TRFSCS
Trigger: GGAGCAGGAGAACCGAGTGCAGAAGGGAAATGGATA...CTTTGAGCAAAGAAATGGGTTTTGCTGGGTCATTTTGCCCTGTGTGCTAAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR GCA 90 bp CGTCTTTGCTCACTTCTTCAAAGTGCAGGTGGCAATGGCCTGTCCAGTTTCCAATTGAAAGACATAGTCTaGTTGGGGCTCTTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: RLCSLLQSAGGNGLSSFQLKDIV*LGLFCS
Trigger: AGAGCAGAAGAGCCCCAAGCAGACTATGTCTTTCAA...TTGGAAACTGGACAGGCCATTGCCACCTGCACTTTGAAGAAGTGAGCAAAGACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR GCA 90 bp GCTGAAACCAGCATCTTTTGCAGAAACCCAGGCAGCAAAACAATCACTTTCATCGGAGGAAGCAAAGTCTaGACTGGCCTGTTGTCAGTC +
Preference number: 4 (lower is better)
Translates to: AETSIFCRNPGSKTITFIGGSKV*TGLLSV
Trigger: GACTGACAACAGGCCAGTGCAGACTTTGCTTCCTCC...GATGAAAGTGATTGTTTTGCTGCCTGGGTTTCTGCAAAAGATGCTGGTTTCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
CDS-3UTR GCA 90 bp TTCATCATGGTCTTAAATTTTGATGGTGTCATGCTGCTCATCCAGAGCAAGAACGGACATCATGGGAGGTaGAGCATCGCTAGGCATGGG +
Preference number: 4 (lower is better)
Translates to: FIMVLNFDGVMLLIQSKNGHHGR*SIARHG
Trigger: CCCATGCCTAGCGATGCTGCACCTCCCATGATGTCC...GTTCTTGCTCTGGATGAGCAGCATGACACCATCAAAATTTAAGACCATGATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302313.10
CDS-3UTR GCA 90 bp AGGCATTGCGTGCCATCTCTGTTTAATAGCAATGCCTTCACATTATCCGTGTGCTGGACTGGAATCAACTaGCCTCTGAAGGCACTTGTG +
Preference number: 4 (lower is better)
Translates to: RHCVPSLFNSNAFTLSVCWTGIN*PLKALV
Trigger: CACAAGTGCCTTCAGAGGGCAGTTGATTCCAGTCCA...GCACACGGATAATGTGAAGGCATTGCTATTAAACAGAGATGGCACGCAATGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420940.6
CDS-3UTR GCA 90 bp TTGCACATGTTCTTGGATCCCATACCCGTAACACCTTTTCAGTGGACCCTGATAAGGGAACCCTGTCTCTaGAGTTGTGCGATCAGAGTA +
Preference number: 4 (lower is better)
Translates to: LHMFLDPIPVTPFQWTLIREPCL*SCAIRV
Trigger: TACTCTGATCGCACAACTGCAGAGACAGGGTTCCCT...TATCAGGGTCCACTGAAAAGGTGTTACGGGTATGGGATCCAAGAACATGTGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420940.6
CDS-3UTR GCA 90 bp GTCATGCTGCTCATCCAGAGCAAGAACCTGTGGTCTCAGCTCGCTTTGTGTAAAATGTGGCCACGTCTTTaGTCACTTCTTCAAAGTGCA +
Preference number: 4 (lower is better)
Translates to: VMLLIQSKNLWSQLALCKMWPRL*SLLQSA
Trigger: TGCACTTTGAAGAAGTGAGCAAAGACGTGGCCACAT...TTTACACAAAGCGAGCTGAGACCACAGGTTCTTGCTCTGGATGAGCAGCATGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR GCA 90 bp CGTCTTTGCTCACTTCTTCAAAGTGCAGGTGGCAATGGCCTGTCCAGTTTCCAAATGTGGCCACGTCTTTaGTCACTTCTTCAAAGTGCA +
Preference number: 4 (lower is better)
Translates to: RLCSLLQSAGGNGLSSFQMWPRL*SLLQSA
Trigger: TGCACTTTGAAGAAGTGAGCAAAGACGTGGCCACAT...TTGGAAACTGGACAGGCCATTGCCACCTGCACTTTGAAGAAGTGAGCAAAGACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR CCA 90 bp AGCATAGACTCAGTCTCACCCCCGGAATCTCGGCAGAGCAGCCTGAACAGTGTGTTTACCCAATCAGTATaGTGTTCCATAGATGCTATA +
Preference number: 4 (lower is better)
Translates to: SIDSVSPPESRQSSLNSVFTQSV*CSIDAI
Trigger: TATAGCATCTATGGAACACCATACTGATTGGGTAAA...CACACTGTTCAGGCTGCTCTGCCGAGATTCCGGGGGTGAGACTGAGTCTATGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420940.6
CDS-3UTR CCA 90 bp TGTCTGTCCAACCCAGCTGATGCTACTAGTTCTTTATCCTTGGCATATGCTAAGGCTATACATCTCTGCTaGCCAAGGGACCAAAGGCGA +
Preference number: 4 (lower is better)
Translates to: CLSNPADATSSLSLAYAKAIHLC*PRDQRR
Trigger: TCGCCTTTGGTCCCTTGGCCAGCAGAGATGTATAGC...CTTAGCATATGCCAAGGATAAAGAACTAGTAGCATCAGCTGGGTTGGACAGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413099.6
CDS-3UTR CCA 90 bp AAGAAGCTGACTAGCAGTGAGGGAACCCTGTCTCTGCAGTTGTGCGATCAGAGTCCCCCTTTAATAACCTaGTCAGGTTGTGTACAAAGA +
Preference number: 4 (lower is better)
Translates to: KKLTSSEGTLSLQLCDQSPPLIT*SGCVQR
Trigger: TCTTTGTACACAACCTGACCAGGTTATTAAAGGGGG...ACTCTGATCGCACAACTGCAGAGACAGGGTTCCCTCACTGCTAGTCAGCTTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR CCA 90 bp AAGAAGCTGACTAGCAGTGAGGGAACCCTGTCTCTGCAGTTGTGCGATCAGAGTATAACTTTTCGGACTTaGAGCATGTCACTAGCAGAG +
Preference number: 4 (lower is better)
Translates to: KKLTSSEGTLSLQLCDQSITFRT*SMSLAE
Trigger: CTCTGCTAGTGACATGCTCCAAGTCCGAAAAGTTAT...ACTCTGATCGCACAACTGCAGAGACAGGGTTCCCTCACTGCTAGTCAGCTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR CCA 90 bp CTATACATCTCTGCTGGCCAAGGGACCAAAGGCGAATTGTCCCATCAGAACTGCTTTGGATCCAAAACCTaGTCCTGGCACAAAAGTTCA +
Preference number: 4 (lower is better)
Translates to: LYISAGQGTKGELSHQNCFGSKT*SWHKSS
Trigger: TGAACTTTTGTGCCAGGACCAGGTTTTGGATCCAAA...GCAGTTCTGATGGGACAATTCGCCTTTGGTCCCTTGGCCAGCAGAGATGTATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
CDS-3UTR TCA 90 bp GATCTTCCTACAAGAACACATCTGAGATGCAATATTAACAACAAGCCCAACATTGCTGTGTTCTGCCGGTaGTGGGCCGCCATCTTGCAT +
Preference number: 4 (lower is better)
Translates to: DLPTRTHLRCNINNKPNIAVFCR*WAAILH
Trigger: ATGCAAGATGGCGGCCCATCACCGGCAGAACACAGC...AATGTTGGGCTTGTTGTTAATATTGCATCTCAGATGTGTTCTTGTAGGAAGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302313.10
CDS-3UTR TCA 90 bp ATCTTCCTGTCCCTTCCACCAGAATACACATGTGTGAAGGCATCATTGACTTGCAGGAGGAGGATCAGCTaGTCTATCAAGCTCCATCTT +
Preference number: 4 (lower is better)
Translates to: IFLSLPPEYTCVKASLTCRRRIS*SIKLHL
Trigger: AAGATGGAGCTTGATAGATCAGCTGATCCTCCTCCT...GCAAGTCAATGATGCCTTCACACATGTGTATTCTGGTGGAAGGGACAGGAAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
CDS-3UTR TCA 90 bp AGCAGTGAGGGAACCCTGTCTCTGCAGTTGTGCGATCAGAGTATCTTAAATAGTACAGTCCAAGTGCTATaGTCCAGCACCTGGAATTTC +
Preference number: 4 (lower is better)
Translates to: SSEGTLSLQLCDQSILNSTVQVL*SSTWNF
Trigger: GAAATTCCAGGTGCTGGATCATAGCACTTGGACTGT...ACTATTTAAGATACTCTGATCGCACAACTGCAGAGACAGGGTTCCCTCACTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR GCA 90 bp GAATTGTCCCATCAGAACTGCCTGACAGGCATTGCGTGCCATCTCTGTTTAATATGCACTCGGTTCTCCTaGTCCCCATTTACATGGTTT +
Preference number: 4 (lower is better)
Translates to: ELSHQNCLTGIACHLCLICTRFS*SPFTWF
Trigger: AAACCATGTAAATGGGGAGCAGGAGAACCGAGTGCA...TATTAAACAGAGATGGCACGCAATGCCTGTCAGGCAGTTCTGATGGGACAATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
CDS-3UTR GCA 90 bp TCTTCATCCATTGGATTCACATGTGTTCTAGGCCAATATTCCAGGAGTGCTTGGTATCCATTTCCCTTCTaGACTCGGTTCTCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: SSSIGFTCVLGQYSRSAWYPFPF*TRFSCS
Trigger: GGAGCAGGAGAACCGAGTGCAGAAGGGAAATGGATA...CCAAGCACTCCTGGAATATTGGCCTAGAACACATGTGAATCCAATGGATGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
CDS-3UTR GCA 90 bp GCACATGTTCTTGGATCCCATACCCGTAACACCTTTTCAGTGGACCCTGATACATTGAAAGACATAGTCTaGTTGGGGCTCTTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: AHVLGSHTRNTFSVDPDTLKDIV*LGLFCS
Trigger: AGAGCAGAAGAGCCCCAAGCAGACTATGTCTTTCAA...TGTATCAGGGTCCACTGAAAAGGTGTTACGGGTATGGGATCCAAGAACATGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
CDS-3UTR GCA 90 bp ATAAACATGTTCCATAACTTTTCGGACTTGGAGCATGTCACTAGCAGAGAGTCTATGACAGGAGGGGAATaGAGCCACCCAAGGCTTAGC +
Preference number: 4 (lower is better)
Translates to: INMFHNFSDLEHVTSRESMTGGE*SHPRLS
Trigger: GCTAAGCCTTGGGTGGCTGCATTCCCCTCCTGTCAT...AGACTCTCTGCTAGTGACATGCTCCAAGTCCGAAAAGTTATGGAACATGTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420940.6
CDS-3UTR CCA 90 bp AGGGACCAAAGGCGAATTGTCCCATCAGAACTGCCTGACAGGCATTGCGTGCCACATAGATGCTATATATaGATCTTGCTTGTGCTGATT +
Preference number: 4 (lower is better)
Translates to: RDQRRIVPSELPDRHCVPHRCYI*ILLVLI
Trigger: AATCAGCACAAGCAAGATCCATATATAGCATCTATG...TGGCACGCAATGCCTGTCAGGCAGTTCTGATGGGACAATTCGCCTTTGGTCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420940.6
CDS-3UTR CCA 90 bp CCAGCATCTTTTGCAGAAACCCAGGCAGCAAAACAATCACTTTCATCCAAAGTAGCTATACATCTCTGCTaGCCAAGGGACCAAAGGCGA +
Preference number: 4 (lower is better)
Translates to: PASFAETQAAKQSLSSKVAIHLC*PRDQRR
Trigger: TCGCCTTTGGTCCCTTGGCCAGCAGAGATGTATAGC...TACTTTGGATGAAAGTGATTGTTTTGCTGCCTGGGTTTCTGCAAAAGATGCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
CDS-3UTR CCA 90 bp AAGAAGCTGACTAGCAGTGAGGGAACCCTGTCTCTGCAGTTGTGCGATCAGAGTTATTCCAGGAGTGCTTaGAGTAAAAGTCCTCCTAAA +
Preference number: 4 (lower is better)
Translates to: KKLTSSEGTLSLQLCDQSYSRSA*SKSPPK
Trigger: TTTAGGAGGACTTTTACTCCAAGCACTCCTGGAATA...ACTCTGATCGCACAACTGCAGAGACAGGGTTCCCTCACTGCTAGTCAGCTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR CCA 90 bp AGGCTTAGCACACAGGGCAAAATGACCCAGCAAAACCCATTTCTTTGCTCAAAGTCTTCAAAGTGCAGGTaGCAATGGCCTGTCCAGTTT +
Preference number: 4 (lower is better)
Translates to: RLSTQGKMTQQNPFLCSKSSKCR*QWPVQF
Trigger: AAACTGGACAGGCCATTGCCACCTGCACTTTGAAGA...CTTTGAGCAAAGAAATGGGTTTTGCTGGGTCATTTTGCCCTGTGTGCTAAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR TCA 90 bp AACCCAGCTGATGCTACTAGTTCTTTATCCTTGGCATATGCTAAGGCCTTTACGAGTCTCGACCGGCTGTaGAAAGTCTATTTAGTGCTG +
Preference number: 4 (lower is better)
Translates to: NPADATSSLSLAYAKAFTSLDRL*KVYLVL
Trigger: CAGCACTAAATAGACTTTTCACAGCCGGTCGAGACT...CGTAAAGGCCTTAGCATATGCCAAGGATAAAGAACTAGTAGCATCAGCTGGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000433841.6
CDS-3UTR TCA 90 bp GAATTGTCCCATCAGAACTGCCTGACAGGCATTGCGTGCCATCTCTGTTTAATACTTTTCAGTGGACCCTaGTACAATGATTGTTCCCAG +
Preference number: 4 (lower is better)
Translates to: ELSHQNCLTGIACHLCLILFSGP*YNDCSQ
Trigger: CTGGGAACAATCATTGTATCAGGGTCCACTGAAAAG...TATTAAACAGAGATGGCACGCAATGCCTGTCAGGCAGTTCTGATGGGACAATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
CDS-3UTR TCA 90 bp AGGCTTAGCACACAGGGCAAAATGACCCAGCAAAACCCATTTCTTTGCTCAAAGATTCAATTTTGGATCTaGCCCATCAGGGCTGCTGAA +
Preference number: 4 (lower is better)
Translates to: RLSTQGKMTQQNPFLCSKIQFWI*PIRAAE
Trigger: TTCAGCAGCCCTGATGGGTCAGATCCAAAATTGAAT...CTTTGAGCAAAGAAATGGGTTTTGCTGGGTCATTTTGCCCTGTGTGCTAAGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR TCA 90 bp GAATTGTCCCATCAGAACTGCCTGACAGGCATTGCGTGCCATCTCTGTTTAATACACCGCTCTTCCATATaGAGTGTTTCACTGTTCGAA +
Preference number: 4 (lower is better)
Translates to: ELSHQNCLTGIACHLCLIHRSSI*SVSLFE
Trigger: TTCGAACAGTGAAACACTTCATATGGAAGAGCGGTG...TATTAAACAGAGATGGCACGCAATGCCTGTCAGGCAGTTCTGATGGGACAATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
CDS-3UTR TCA 90 bp CCAAGGCTTAGCACACAGGGCAAAATGACCCAGCAAAACCCATTTCTTTGCTCAACCACTGATTTACTCTaGATACAAATGACCTTGGGG +
Preference number: 4 (lower is better)
Translates to: PRLSTQGKMTQQNPFLCSTTDLL*IQMTLG
Trigger: CCCCAAGGTCATTTGTATTCAGAGTAAATCAGTGGT...TGAGCAAAGAAATGGGTTTTGCTGGGTCATTTTGCCCTGTGTGCTAAGCCTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR TCA 90 bp CTTCAAAGTGCAGGTGGCAATGGCCTGTCCAGTTTCCAAAAGAAGCTGACTAGCAACTGTATTACGGTTTaGCTGGAGGGGAAAGAAATA +
Preference number: 4 (lower is better)
Translates to: LQSAGGNGLSSFQKKLTSNCITV*LEGKEI
Trigger: TATTTCTTTCCCCTCCAGTCAAACCGTAATACAGTT...GCTAGTCAGCTTCTTTTGGAAACTGGACAGGCCATTGCCACCTGCACTTTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR GCA 90 bp GAATTGTCCCATCAGAACTGCCTGACAGGCATTGCGTGCCATCTCTGTTTAATACTGACAGGCATTGCGTaGCATCTCTGTTTAATAGCA +
Preference number: 4 (lower is better)
Translates to: ELSHQNCLTGIACHLCLILTGIA*HLCLIA
Trigger: TGCTATTAAACAGAGATGGCACGCAATGCCTGTCAG...TATTAAACAGAGATGGCACGCAATGCCTGTCAGGCAGTTCTGATGGGACAATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
CDS-3UTR GCA 90 bp GGAACCCTGTCTCTGCAGTTGTGCGATCAGAGTATCTTAAATAGTAAGGTATGGATGGACTCGGTATGTTaGTATACATCTCTGCTGGCC +
Preference number: 4 (lower is better)
Translates to: GTLSLQLCDQSILNSKVWMDSVC*YTSLLA
Trigger: GGCCAGCAGAGATGTATAGCAACATACCGAGTCCAT...CCATACCTTACTATTTAAGATACTCTGATCGCACAACTGCAGAGACAGGGTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR GCA 90 bp CCAAGGCTTAGCACACAGGGCAAAATGACCCAGCAAAACCCATTTCTTTGCTCATGTAGACTTAGTTGTTaGAACCCAAATTGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: PRLSTQGKMTQQNPFLCSCRLSC*NPNCRR
Trigger: CCTCCTGCAATTTGGGTTGCAACAACTAAGTCTACA...TGAGCAAAGAAATGGGTTTTGCTGGGTCATTTTGCCCTGTGTGCTAAGCCTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR GCA 90 bp AAGAAGCTGACTAGCAGTGAGGGAACCCTGTCTCTGCAGTTGTGCGATCAGAGTCTTCAAAATCCACTTTaGCCAGATCTTCAACTTTAC +
Preference number: 4 (lower is better)
Translates to: KKLTSSEGTLSLQLCDQSLQNPL*PDLQLY
Trigger: GTAAAGTTGAAGATCTGGGCAAAGTGGATTTTGAAG...ACTCTGATCGCACAACTGCAGAGACAGGGTTCCCTCACTGCTAGTCAGCTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR GCA 90 bp CTCGGTATGTTGCTATACATCTCTGCTGGCCAAGGGACCAAAGGCGAATTGTCCCTTCAAAATCCACTTTaGCCAGATCTTCAACTTTAC +
Preference number: 4 (lower is better)
Translates to: LGMLLYISAGQGTKGELSLQNPL*PDLQLY
Trigger: GTAAAGTTGAAGATCTGGGCAAAGTGGATTTTGAAG...GGACAATTCGCCTTTGGTCCCTTGGCCAGCAGAGATGTATAGCAACATACCGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
CDS-3UTR GCA 90 bp AAGAAGCTGACTAGCAGTGAGGGAACCCTGTCTCTGCAGTTGTGCGATCAGAGTAGAACACATCTGAGATaGAATATTAACAACAAGCCC +
Preference number: 4 (lower is better)
Translates to: KKLTSSEGTLSLQLCDQSRTHLR*NINNKP
Trigger: GGGCTTGTTGTTAATATTGCATCTCAGATGTGTTCT...ACTCTGATCGCACAACTGCAGAGACAGGGTTCCCTCACTGCTAGTCAGCTTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR GCA 90 bp AAAGAAGCTGGTTGCTCTCTGAGGAAGGGAGAAAGACCATTTCAACTTATTAGAGCCCAACAGTCCAAGTaGTATGATCCAGCACCTGGA +
Preference number: 4 (lower is better)
Translates to: KEAGCSLRKGERPFQLIRAQQSK*YDPAPG
Trigger: TCCAGGTGCTGGATCATAGCACTTGGACTGTTGGGC...TCTAATAAGTTGAAATGGTCTTTCTCCCTTCCTCAGAGAGCAACCAGCTTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR GCA 90 bp GTTTTGCACATGTTCTTGGATCCCATACCCGTAACACCTTTTCAGTGGACCCTGATTTTGATGGTGTCATaGTGCTCATCCAGAGCAAGA +
Preference number: 4 (lower is better)
Translates to: VLHMFLDPIPVTPFQWTLILMVS*CSSRAR
Trigger: TCTTGCTCTGGATGAGCAGCATGACACCATCAAAAT...CAGGGTCCACTGAAAAGGTGTTACGGGTATGGGATCCAAGAACATGTGCAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000420940.6
CDS-3UTR CCA 90 bp AAGAAGCTGACTAGCAGTGAGGGAACCCTGTCTCTGCAGTTGTGCGATCAGAGTCTAGTTCTTTATCCTTaGCATATGCTAAGGCCTTTA +
Preference number: 4 (lower is better)
Translates to: KKLTSSEGTLSLQLCDQSLVLYP*HMLRPL
Trigger: TAAAGGCCTTAGCATATGCCAAGGATAAAGAACTAG...ACTCTGATCGCACAACTGCAGAGACAGGGTTCCCTCACTGCTAGTCAGCTTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302313.10
CDS-3UTR CCA 90 bp AGGCTTGTCTTACAGTTTTATGGGGGTGGACCACTGATTTACTCTGAATACAAAAGCCCAGCCTTCACGTaGACTTCTGACGGTAATGGA +
Preference number: 4 (lower is better)
Translates to: RLVLQFYGGGPLIYSEYKSPAFT*TSDGNG
Trigger: TCCATTACCGTCAGAAGTCCACGTGAAGGCTGGGCT...TTTGTATTCAGAGTAAATCAGTGGTCCACCCCCATAAAACTGTAAGACAAGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR CCA 90 bp AAGAAGCTGACTAGCAGTGAGGGAACCCTGTCTCTGCAGTTGTGCGATCAGAGTAGATTTTTACCCTTTTaGCATTGCAGACTGTCGAAT +
Preference number: 4 (lower is better)
Translates to: KKLTSSEGTLSLQLCDQSRFLPF*HCRLSN
Trigger: ATTCGACAGTCTGCAATGCCAAAAGGGTAAAAATCT...ACTCTGATCGCACAACTGCAGAGACAGGGTTCCCTCACTGCTAGTCAGCTTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
3UTR CAA 72 bp AAGCTGACTAGCAGTGAGGGAACCCTGTCTCTGCAGTaGTGCGATCAGAGTATCTTAAATAGTAAGGTATGG +
Preference number: 4 (lower is better)
Translates to: KLTSSEGTLSLQ*CDQSILNSKVW
Trigger: CCATACCTTACTATTTAAGATACTCTGATCGCACAACTGCAGAGACAGGGTTCCCTCACTGCTAGTCAGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR TCA 90 bp AGCAGTGAGGGAACCCTGTCTCTGCAGTTGTGCGATCAGAGTATCTTAAATAGTTGGACCCTGATACAATaGTTGTTCCCAGTTGATTCA +
Preference number: 4 (lower is better)
Translates to: SSEGTLSLQLCDQSILNSWTLIQ*LFPVDS
Trigger: TGAATCAACTGGGAACAATCATTGTATCAGGGTCCA...ACTATTTAAGATACTCTGATCGCACAACTGCAGAGACAGGGTTCCCTCACTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR TCA 90 bp GAATTGTCCCATCAGAACTGCCTGACAGGCATTGCGTGCCATCTCTGTTTAATATTAAGAATGTGGCACTaGATAATACTAGCACCCCCT +
Preference number: 4 (lower is better)
Translates to: ELSHQNCLTGIACHLCLILRMWH*IILAPP
Trigger: AGGGGGTGCTAGTATTATTCAGTGCCACATTCTTAA...TATTAAACAGAGATGGCACGCAATGCCTGTCAGGCAGTTCTGATGGGACAATTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
CDS-3UTR TCA 90 bp TCTTCATCCATTGGATTCACATGTGTTCTAGGCCAATATTCCAGGAGTGCTTGGGAGGAAGGTCGTAAATaGATATCCAGGAGCATTAGC +
Preference number: 4 (lower is better)
Translates to: SSSIGFTCVLGQYSRSAWEEGRK*ISRSIS
Trigger: GCTAATGCTCCTGGATATTCATTTACGACCTTCCTC...CCAAGCACTCCTGGAATATTGGCCTAGAACACATGTGAATCCAATGGATGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
CDS-3UTR TCA 90 bp CCAGCATCTTTTGCAGAAACCCAGGCAGCAAAACAATCACTTTCATCCAAAGTAACAGTCCAAGTGCTATaGTCCAGCACCTGGAATTTC +
Preference number: 4 (lower is better)
Translates to: PASFAETQAAKQSLSSKVTVQVL*SSTWNF
Trigger: GAAATTCCAGGTGCTGGATCATAGCACTTGGACTGT...TACTTTGGATGAAAGTGATTGTTTTGCTGCCTGGGTTTCTGCAAAAGATGCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420940.6
CDS-3UTR TCA 90 bp AGGCTTAGCACACAGGGCAAAATGACCCAGCAAAACCCATTTCTTTGCTCAAAGATGGGGGTGGACCACTaGTTTACTCTGAATACAAAT +
Preference number: 4 (lower is better)
Translates to: RLSTQGKMTQQNPFLCSKMGVDH*FTLNTN
Trigger: ATTTGTATTCAGAGTAAATCAGTGGTCCACCCCCAT...CTTTGAGCAAAGAAATGGGTTTTGCTGGGTCATTTTGCCCTGTGTGCTAAGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR GCA 90 bp CATATTTTTATCCACAGTGATGTCAATTACCCATTGTGGCACTGTTTCATTAAGCACTTTCCTCCGCCCTaGTGTGTTCTGCCGGTGATG +
Preference number: 4 (lower is better)
Translates to: HIFIHSDVNYPLWHCFIKHFPPP*CVLPVM
Trigger: CATCACCGGCAGAACACAGCAGGGCGGAGGAAAGTG...CTTAATGAAACAGTGCCACAATGGGTAATTGACATCACTGTGGATAAAAATATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
CDS-3UTR GCA 90 bp CTTCTGACGGTAATGGAGGGTGAGGTCTCCACCGCTCTTCCATATGAAGTGTTTGCAAAATCCCTTGTGTaGATTCCATACTTTTACTGT +
Preference number: 4 (lower is better)
Translates to: LLTVMEGEVSTALPYEVFAKSLV*IPYFYC
Trigger: ACAGTAAAAGTATGGAATGCACACAAGGGATTTTGC...AAACACTTCATATGGAAGAGCGGTGGAGACCTCACCCTCCATTACCGTCAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
CDS-3UTR GCA 90 bp GGAACCCTGTCTCTGCAGTTGTGCGATCAGAGTATCTTAAATAGTAAGGTATGGCTGACAGGCATTGCGTaGCATCTCTGTTTAATAGCA +
Preference number: 4 (lower is better)
Translates to: GTLSLQLCDQSILNSKVWLTGIA*HLCLIA
Trigger: TGCTATTAAACAGAGATGGCACGCAATGCCTGTCAG...CCATACCTTACTATTTAAGATACTCTGATCGCACAACTGCAGAGACAGGGTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR GCA 90 bp CGAATTTTCTGGAAACTGTATTACGGTTTGACTGGAGGGGAAAGAAATACAATCTTGTCCCATCAGAACTaGCTGACAGGCATTGCGTGC +
Preference number: 4 (lower is better)
Translates to: RIFWKLYYGLTGGERNTILSHQN*LTGIAC
Trigger: GCACGCAATGCCTGTCAGGCAGTTCTGATGGGACAA...GATTGTATTTCTTTCCCCTCCAGTCAAACCGTAATACAGTTTCCAGAAAATTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR GCA 90 bp GTCATGCTGCTCATCCAGAGCAAGAACCTGTGGTCTCAGCTCGCTTTGTGTAAATTCAATTTTCTCCTCTaGCAACACAGCAATATCTTC +
Preference number: 4 (lower is better)
Translates to: VMLLIQSKNLWSQLALCKFNFLL*QHSNIF
Trigger: GAAGATATTGCTGTGTTGGCAGAGGAGAAAATTGAA...TTTACACAAAGCGAGCTGAGACCACAGGTTCTTGCTCTGGATGAGCAGCATGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR GCA 90 bp GCTCACTTCTTCAAAGTGCAGGTGGCAATGGCCTGTCCAGTTTCCAAAAGAAGCTTCAATTTTCTCCTCTaGCAACACAGCAATATCTTC +
Preference number: 4 (lower is better)
Translates to: AHFFKVQVAMACPVSKRSFNFLL*QHSNIF
Trigger: GAAGATATTGCTGTGTTGGCAGAGGAGAAAATTGAA...GCTTCTTTTGGAAACTGGACAGGCCATTGCCACCTGCACTTTGAAGAAGTGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR GCA 90 bp CTACACATGGAGACTGGTTTCTATATTACATCTCGATTAGTCACTTCAATTGAAGGGCTCTTCTGCTCTTaGACTCTGCTTCCCTGGGGA +
Preference number: 4 (lower is better)
Translates to: LHMETGFYITSRLVTSIEGLFCS*TLLPWG
Trigger: TCCCCAGGGAAGCAGAGTGCAAGAGCAGAAGAGCCC...TTCAATTGAAGTGACTAATCGAGATGTAATATAGAAACCAGTCTCCATGTGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302313.10
ENST00000413099.6
ENST00000420940.6
CDS-3UTR GCA 90 bp GCTCACTTCTTCAAAGTGCAGGTGGCAATGGCCTGTCCAGTTTCCAAAAGAAGCCTGGTTCTCAAATTGTaGAACAGCAAATTCCCATTA +
Preference number: 4 (lower is better)
Translates to: AHFFKVQVAMACPVSKRSLVLKL*NSKFPL
Trigger: TAATGGGAATTTGCTGTTGCACAATTTGAGAACCAG...GCTTCTTTTGGAAACTGGACAGGCCATTGCCACCTGCACTTTGAAGAAGTGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR GCA 90 bp CTTCAAAGTGCAGGTGGCAATGGCCTGTCCAGTTTCCAAAAGAAGCTGACTAGCAGAACACATCTGAGATaGAATATTAACAACAAGCCC +
Preference number: 4 (lower is better)
Translates to: LQSAGGNGLSSFQKKLTSRTHLR*NINNKP
Trigger: GGGCTTGTTGTTAATATTGCATCTCAGATGTGTTCT...GCTAGTCAGCTTCTTTTGGAAACTGGACAGGCCATTGCCACCTGCACTTTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR CCA 90 bp GACTTGCAGCGCCCAAACACCTTCATCATGGACTCGGTATGTTGCTATACATCTTTCCCAGTTGATTCATaGCCAGGCTATAAATGGAAT +
Preference number: 4 (lower is better)
Translates to: DLQRPNTFIMDSVCCYTSFPVDS*PGYKWN
Trigger: ATTCCATTTATAGCCTGGCCATGAATCAACTGGGAA...AGATGTATAGCAACATACCGAGTCCATGATGAAGGTGTTTGGGCGCTGCAAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
CDS-3UTR CCA 90 bp CGAATTGTCCCATCAGAACTGCCTGACAGGCATTGCGTGCCATCTCTGTTTAATTTCCTCTTCATCCATTaGATTCACATGTGTTCTAGG +
Preference number: 4 (lower is better)
Translates to: RIVPSELPDRHCVPSLFNFLFIH*IHMCSR
Trigger: CCTAGAACACATGTGAATCCAATGGATGAAGAGGAA...ATTAAACAGAGATGGCACGCAATGCCTGTCAGGCAGTTCTGATGGGACAATTCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
CDS-3UTR CCA 90 bp CCAGCATCTTTTGCAGAAACCCAGGCAGCAAAACAATCACTTTCATCCAAAGTAGATCACGGGTGTATGTaGGGGCACTTGAAAATATCC +
Preference number: 4 (lower is better)
Translates to: PASFAETQAAKQSLSSKVDHGCM*GHLKIS
Trigger: GGATATTTTCAAGTGCCCCCACATACACCCGTGATC...TACTTTGGATGAAAGTGATTGTTTTGCTGCCTGGGTTTCTGCAAAAGATGCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
CDS-3UTR CCA 90 bp TCTCTGTTTAATAGCAATGCCTTCACATTATCCGTGTGCCCTTTAAGCTTCATTAAGTCTTGCTCCCGTTaGGGATCAGTGGGCTTCCTA +
Preference number: 4 (lower is better)
Translates to: SLFNSNAFTLSVCPLSFIKSCSR*GSVGFL
Trigger: TAGGAAGCCCACTGATCCCCAACGGGAGCAAGACTT...AATGAAGCTTAAAGGGCACACGGATAATGTGAAGGCATTGCTATTAAACAGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
CDS-3UTR CCA 90 bp CGTCTTTGCTCACTTCTTCAAAGTGCAGGTGGCAATGGCCTGTCCAGTTTCCAATCTACACATGGAGACTaGTTTCTATATTACATCTCG +
Preference number: 4 (lower is better)
Translates to: RLCSLLQSAGGNGLSSFQSTHGD*FLYYIS
Trigger: CGAGATGTAATATAGAAACCAGTCTCCATGTGTAGA...TTGGAAACTGGACAGGCCATTGCCACCTGCACTTTGAAGAAGTGAGCAAAGACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR CCA 90 bp TTCATCATGGTCTTAAATTTTGATGGTGTCATGCTGCTCATCCAGAGCAAGAACTGCACTCTGCTTCCCTaGGGACAGCTTAATCTACAC +
Preference number: 4 (lower is better)
Translates to: FIMVLNFDGVMLLIQSKNCTLLP*GQLNLH
Trigger: GTGTAGATTAAGCTGTCCCCAGGGAAGCAGAGTGCA...GTTCTTGCTCTGGATGAGCAGCATGACACCATCAAAATTTAAGACCATGATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR CCA 90 bp CCAAGGCTTAGCACACAGGGCAAAATGACCCAGCAAAACCCATTTCTTTGCTCATGTCTTACAGTTTTATaGGGGTGGACCACTGATTTA +
Preference number: 4 (lower is better)
Translates to: PRLSTQGKMTQQNPFLCSCLTVL*GWTTDL
Trigger: TAAATCAGTGGTCCACCCCCATAAAACTGTAAGACA...TGAGCAAAGAAATGGGTTTTGCTGGGTCATTTTGCCCTGTGTGCTAAGCCTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
3UTR CAA 72 bp GCAGACTGTCGAATTTTCTGGAAACTGTATTACGGTTaGACTGGAGGGGAAAGAAATACAATCATGCTGGGG +
Preference number: 4 (lower is better)
Translates to: ADCRIFWKLYYG*TGGERNTIMLG
Trigger: CCCCAGCATGATTGTATTTCTTTCCCCTCCAGTCAAACCGTAATACAGTTTCCAGAAAATTCGACAGTCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR TCA 90 bp GCAGTCAATGCTGTTAGAGTATTCACATCCCAAAGGAATATTTGTCTGTCCAACAGTCTCGACCGGCTGTaGAAAGTCTATTTAGTGCTG +
Preference number: 4 (lower is better)
Translates to: AVNAVRVFTSQRNICLSNSLDRL*KVYLVL
Trigger: CAGCACTAAATAGACTTTTCACAGCCGGTCGAGACT...GTTGGACAGACAAATATTCCTTTGGGATGTGAATACTCTAACAGCATTGACTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000413099.6
ENST00000423296.6
ENST00000433841.6
CDS-3UTR TCA 90 bp TATGTTGCTATACATCTCTGCTGGCCAAGGGACCAAAGGCGAATTGTCCCATCATTAAAGAAGAAGTTGTaGCAGTGTTATTTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: YVAIHLCWPRDQRRIVPSLKKKL*QCYLRQ
Trigger: CTGCCTCAAATAACACTGTCACAACTTCTTCTTTAA...TGATGGGACAATTCGCCTTTGGTCCCTTGGCCAGCAGAGATGTATAGCAACATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413099.6
CDS-3UTR TCA 90 bp TTCATCATGGTCTTAAATTTTGATGGTGTCATGCTGCTCATCCAGAGCAAGAACAGGAGGAGGATCAGCTaGTCTATCAAGCTCCATCTT +
Preference number: 4 (lower is better)
Translates to: FIMVLNFDGVMLLIQSKNRRRIS*SIKLHL
Trigger: AAGATGGAGCTTGATAGATCAGCTGATCCTCCTCCT...GTTCTTGCTCTGGATGAGCAGCATGACACCATCAAAATTTAAGACCATGATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR TCA 90 bp TCCAGCTTCACCAAAGATCACGGGTGTATGTGGGGGCACTTGAAAATATCCATTGTAGATAAGGTCCTTTaGAACAAAAGGAGGAAGCAA +
Preference number: 4 (lower is better)
Translates to: SSFTKDHGCMWGHLKISIVDKVL*NKRRKQ
Trigger: TTGCTTCCTCCTTTTGTTTCAAAGGACCTTATCTAC...AATGGATATTTTCAAGTGCCCCCACATACACCCGTGATCTTTGGTGAAGCTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
CDS-3UTR TCA 90 bp AGGCTTAGCACACAGGGCAAAATGACCCAGCAAAACCCATTTCTTTGCTCAAAGTACTCTGAATACAAATaGCCTTGGGGAGAATCCAAA +
Preference number: 4 (lower is better)
Translates to: RLSTQGKMTQQNPFLCSKYSEYK*PWGESK
Trigger: TTTGGATTCTCCCCAAGGTCATTTGTATTCAGAGTA...CTTTGAGCAAAGAAATGGGTTTTGCTGGGTCATTTTGCCCTGTGTGCTAAGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR GCA 90 bp TCAATGCTGTTAGAGTATTCACATCCCAAAGGAATATTTGTCTGTCCAACCCAGAGTGCTGGATCCAGCTaGAGAGCATTGACTCCATTT +
Preference number: 4 (lower is better)
Translates to: SMLLEYSHPKGIFVCPTQSAGSS*RALTPF
Trigger: AAATGGAGTCAATGCTCTGCAGCTGGATCCAGCACT...CTGGGTTGGACAGACAAATATTCCTTTGGGATGTGAATACTCTAACAGCATTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000413099.6
ENST00000423296.6
ENST00000433841.6
CDS-3UTR GCA 90 bp CAGTCAATGCTGTTAGAGTATTCACATCCCAAAGGAATATTTGTCTGTCCAACCAGTGCTGGATCCAGCTaGAGAGCATTGACTCCATTT +
Preference number: 4 (lower is better)
Translates to: QSMLLEYSHPKGIFVCPTSAGSS*RALTPF
Trigger: AAATGGAGTCAATGCTCTGCAGCTGGATCCAGCACT...GGTTGGACAGACAAATATTCCTTTGGGATGTGAATACTCTAACAGCATTGACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000413099.6
ENST00000423296.6
ENST00000433841.6
CDS-3UTR GCA 90 bp GCATCATTGACTTGCAGCGCCCAAACACCTTCATCATGGACTCGGTATGTTGCTATGGTGTTCCATAGATaGTATATATGGATCTTGCTT +
Preference number: 4 (lower is better)
Translates to: ASLTCSAQTPSSWTRYVAMVFHR*YIWILL
Trigger: AAGCAAGATCCATATATAGCATCTATGGAACACCAT...AGCAACATACCGAGTCCATGATGAAGGTGTTTGGGCGCTGCAAGTCAATGATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420940.6
CDS-3UTR GCA 90 bp TTCATCATGGTCTTAAATTTTGATGGTGTCATGCTGCTCATCCAGAGCAAGAACTGCACTCGGTTCTCCTaGTCCCCATTTACATGGTTT +
Preference number: 4 (lower is better)
Translates to: FIMVLNFDGVMLLIQSKNCTRFS*SPFTWF
Trigger: AAACCATGTAAATGGGGAGCAGGAGAACCGAGTGCA...GTTCTTGCTCTGGATGAGCAGCATGACACCATCAAAATTTAAGACCATGATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR GCA 90 bp GCAGTCAATGCTGTTAGAGTATTCACATCCCAAAGGAATATTTGTCTGTCCAACTGCACTCGGTTCTCCTaGTCCCCATTTACATGGTTT +
Preference number: 4 (lower is better)
Translates to: AVNAVRVFTSQRNICLSNCTRFS*SPFTWF
Trigger: AAACCATGTAAATGGGGAGCAGGAGAACCGAGTGCA...GTTGGACAGACAAATATTCCTTTGGGATGTGAATACTCTAACAGCATTGACTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413099.6
CDS-3UTR GCA 90 bp CTACACATGGAGACTGGTTTCTATATTACATCTCGATTAGTCACTTCAATTGAATGCTTGGGGCTCTTCTaGTCTTGCACTCTGCTTCCC +
Preference number: 4 (lower is better)
Translates to: LHMETGFYITSRLVTSIECLGLF*SCTLLP
Trigger: GGGAAGCAGAGTGCAAGAGCAGAAGAGCCCCAAGCA...TTCAATTGAAGTGACTAATCGAGATGTAATATAGAAACCAGTCTCCATGTGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302313.10
ENST00000413099.6
ENST00000420940.6
CDS-3UTR GCA 90 bp ATCAGGGCTGCTGAAACCAGCATCTTTTGCAGAAACCCAGGCAGCAAAACAATCAGCCTTCATATCTACTaGATGAATGGAATGTACTGT +
Preference number: 4 (lower is better)
Translates to: IRAAETSIFCRNPGSKTISLHIY*MNGMYC
Trigger: ACAGTACATTCCATTCATGCAGTAGATATGAAGGCT...GATTGTTTTGCTGCCTGGGTTTCTGCAAAAGATGCTGGTTTCAGCAGCCCTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420940.6
CDS-3UTR GCA 90 bp GTTTTGCACATGTTCTTGGATCCCATACCCGTAACACCTTTTCAGTGGACCCTGATGGTGTTCCATAGATaGTATATATGGATCTTGCTG +
Preference number: 4 (lower is better)
Translates to: VLHMFLDPIPVTPFQWTLMVFHR*YIWILL
Trigger: CAGCAAGATCCATATATAGCATCTATGGAACACCAT...CAGGGTCCACTGAAAAGGTGTTACGGGTATGGGATCCAAGAACATGTGCAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433841.6
CDS-3UTR CCA 90 bp GTCATGCTGCTCATCCAGAGCAAGAACCTGTGGTCTCAGCTCGCTTTGTGTAAATTTACCCAATCAGTATaGTGTTCCATAGATGCTATA +
Preference number: 4 (lower is better)
Translates to: VMLLIQSKNLWSQLALCKFTQSV*CSIDAI
Trigger: TATAGCATCTATGGAACACCATACTGATTGGGTAAA...TTTACACAAAGCGAGCTGAGACCACAGGTTCTTGCTCTGGATGAGCAGCATGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR CCA 90 bp GACTTGCAGCGCCCAAACACCTTCATCATGGACTCGGTATGTTGCTATACATCTTGGCCAGGCTATAAATaGAATCTTTGTTTCCACTTA +
Preference number: 4 (lower is better)
Translates to: DLQRPNTFIMDSVCCYTSWPGYK*NLCFHL
Trigger: TAAGTGGAAACAAAGATTCCATTTATAGCCTGGCCA...AGATGTATAGCAACATACCGAGTCCATGATGAAGGTGTTTGGGCGCTGCAAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
CDS-3UTR CCA 90 bp AGCAGTGAGGGAACCCTGTCTCTGCAGTTGTGCGATCAGAGTATCTTAAATAGTTATTCCAGGAGTGCTTaGAGTAAAAGTCCTCCTAAA +
Preference number: 4 (lower is better)
Translates to: SSEGTLSLQLCDQSILNSYSRSA*SKSPPK
Trigger: TTTAGGAGGACTTTTACTCCAAGCACTCCTGGAATA...ACTATTTAAGATACTCTGATCGCACAACTGCAGAGACAGGGTTCCCTCACTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR CCA 90 bp AGCAGTGAGGGAACCCTGTCTCTGCAGTTGTGCGATCAGAGTATCTTAAATAGTTTCCTCTTCATCCATTaGATTCACATGTGTTCTAGG +
Preference number: 4 (lower is better)
Translates to: SSEGTLSLQLCDQSILNSFLFIH*IHMCSR
Trigger: CCTAGAACACATGTGAATCCAATGGATGAAGAGGAA...ACTATTTAAGATACTCTGATCGCACAACTGCAGAGACAGGGTTCCCTCACTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR CCA 90 bp ATCTTCCTGTCCCTTCCACCAGAATACACATGTGTGAAGGCATCATTGACTTGCTTCCTCTTCATCCATTaGATTCACATGTGTTCTAGG +
Preference number: 4 (lower is better)
Translates to: IFLSLPPEYTCVKASLTCFLFIH*IHMCSR
Trigger: CCTAGAACACATGTGAATCCAATGGATGAAGAGGAA...GCAAGTCAATGATGCCTTCACACATGTGTATTCTGGTGGAAGGGACAGGAAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
CDS-3UTR CCA 90 bp ATCAGGGCTGCTGAAACCAGCATCTTTTGCAGAAACCCAGGCAGCAAAACAATCTGCTCCCCATTTACATaGTTTACTTCATTTTCCTCT +
Preference number: 4 (lower is better)
Translates to: IRAAETSIFCRNPGSKTICSPFT*FTSFSS
Trigger: AGAGGAAAATGAAGTAAACCATGTAAATGGGGAGCA...GATTGTTTTGCTGCCTGGGTTTCTGCAAAAGATGCTGGTTTCAGCAGCCCTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
CDS-3UTR CCA 90 bp TGTCTGTCCAACCCAGCTGATGCTACTAGTTCTTTATCCTTGGCATATGCTAAGTTTGGATCCAAAACCTaGTCCTGGCACAAAAGTTCA +
Preference number: 4 (lower is better)
Translates to: CLSNPADATSSLSLAYAKFGSKT*SWHKSS
Trigger: TGAACTTTTGTGCCAGGACCAGGTTTTGGATCCAAA...CTTAGCATATGCCAAGGATAAAGAACTAGTAGCATCAGCTGGGTTGGACAGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413099.6
CDS-3UTR CCA 90 bp TTCATCATGGTCTTAAATTTTGATGGTGTCATGCTGCTCATCCAGAGCAAGAACAAGCAAAGTCTGCACTaGCCTGTTGTCAGTCTTCTG +
Preference number: 4 (lower is better)
Translates to: FIMVLNFDGVMLLIQSKNKQSLH*PVVSLL
Trigger: CAGAAGACTGACAACAGGCCAGTGCAGACTTTGCTT...GTTCTTGCTCTGGATGAGCAGCATGACACCATCAAAATTTAAGACCATGATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR CCA 90 bp GCTTTTTCTTCACAAATTAGCACCCGAATGTCAGGGTTTCTTAGGTCTGTACAATCTTCAAAGTGCAGGTaGCAATGGCCTGTCCAGTTT +
Preference number: 4 (lower is better)
Translates to: AFSSQISTRMSGFLRSVQSSKCR*QWPVQF
Trigger: AAACTGGACAGGCCATTGCCACCTGCACTTTGAAGA...TTGTACAGACCTAAGAAACCCTGACATTCGGGTGCTAATTTGTGAAGAAAAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420940.6
CDS-3UTR CCA 90 bp ATCAGGGCTGCTGAAACCAGCATCTTTTGCAGAAACCCAGGCAGCAAAACAATCAGATTTTTACCCTTTTaGCATTGCAGACTGTCGAAT +
Preference number: 4 (lower is better)
Translates to: IRAAETSIFCRNPGSKTIRFLPF*HCRLSN
Trigger: ATTCGACAGTCTGCAATGCCAAAAGGGTAAAAATCT...GATTGTTTTGCTGCCTGGGTTTCTGCAAAAGATGCTGGTTTCAGCAGCCCTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000420940.6
CDS-3UTR TCA 90 bp GGACAGCTTAATCTACACATGGAGACTGGTTTCTATATTACATCTCGATTAGTCAGTCTCGACCGGCTGTaGAAAGTCTATTTAGTGCTG +
Preference number: 4 (lower is better)
Translates to: GQLNLHMETGFYITSRLVSLDRL*KVYLVL
Trigger: CAGCACTAAATAGACTTTTCACAGCCGGTCGAGACT...GACTAATCGAGATGTAATATAGAAACCAGTCTCCATGTGTAGATTAAGCTGTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302313.10
ENST00000413099.6
ENST00000420940.6
CDS-3UTR TCA 90 bp CTTCACAAATTAGCACCCGAATGTCAGGGTTTCTTAGGTCTGTACAATAAATCTAGTCTCGACCGGCTGTaGAAAGTCTATTTAGTGCTG +
Preference number: 4 (lower is better)
Translates to: LHKLAPECQGFLGLYNKSSLDRL*KVYLVL
Trigger: CAGCACTAAATAGACTTTTCACAGCCGGTCGAGACT...AGATTTATTGTACAGACCTAAGAAACCCTGACATTCGGGTGCTAATTTGTGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
CDS-3UTR TCA 90 bp TCTTCATCCATTGGATTCACATGTGTTCTAGGCCAATATTCCAGGAGTGCTTGGGTAGATAAGGTCCTTTaGAACAAAAGGAGGAAGCAA +
Preference number: 4 (lower is better)
Translates to: SSSIGFTCVLGQYSRSAWVDKVL*NKRRKQ
Trigger: TTGCTTCCTCCTTTTGTTTCAAAGGACCTTATCTAC...CCAAGCACTCCTGGAATATTGGCCTAGAACACATGTGAATCCAATGGATGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
CDS-3UTR TCA 90 bp AAAGAAGCTGGTTGCTCTCTGAGGAAGGGAGAAAGACCATTTCAACTTATTAGACCCCAGCCGAACCTGTaGAGATGTAGAAAAGAAAAA +
Preference number: 4 (lower is better)
Translates to: KEAGCSLRKGERPFQLIRPQPNL*RCRKEK
Trigger: TTTTTCTTTTCTACATCTTCACAGGTTCGGCTGGGG...TCTAATAAGTTGAAATGGTCTTTCTCCCTTCCTCAGAGAGCAACCAGCTTCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR TCA 90 bp TCCCATACCCGTAACACCTTTTCAGTGGACCCTGATACAATGATTGTTCCCAGTGAAAAATCCTTGTGCTaGTTGACACTCCATATTCTT +
Preference number: 4 (lower is better)
Translates to: SHTRNTFSVDPDTMIVPSEKSLC*LTLHIL
Trigger: AAGAATATGGAGTGTCAATCAGCACAAGGATTTTTC...ACTGGGAACAATCATTGTATCAGGGTCCACTGAAAAGGTGTTACGGGTATGGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433841.6
CDS-3UTR GCA 90 bp AGGCATTGCGTGCCATCTCTGTTTAATAGCAATGCCTTCACATTATCCGTGTGCTCCTTAATGTTGACATaGAAAATCCCTTGTGTGCAT +
Preference number: 4 (lower is better)
Translates to: RHCVPSLFNSNAFTLSVCSLMLT*KIPCVH
Trigger: ATGCACACAAGGGATTTTGCATGTCAACATTAAGGA...GCACACGGATAATGTGAAGGCATTGCTATTAAACAGAGATGGCACGCAATGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
CDS-3UTR GCA 90 bp AGGCTTGTCTTACAGTTTTATGGGGGTGGACCACTGATTTACTCTGAATACAAACTGACAGGCATTGCGTaGCATCTCTGTTTAATAGCA +
Preference number: 4 (lower is better)
Translates to: RLVLQFYGGGPLIYSEYKLTGIA*HLCLIA
Trigger: TGCTATTAAACAGAGATGGCACGCAATGCCTGTCAG...TTTGTATTCAGAGTAAATCAGTGGTCCACCCCCATAAAACTGTAAGACAAGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR GCA 90 bp GATCTTCCTACAAGAACACATCTGAGATGCAATATTAACAACAAGCCCAACATTTATCCATTTCCCTTCTaGACTCGGTTCTCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: DLPTRTHLRCNINNKPNIYPFPF*TRFSCS
Trigger: GGAGCAGGAGAACCGAGTGCAGAAGGGAAATGGATA...AATGTTGGGCTTGTTGTTAATATTGCATCTCAGATGTGTTCTTGTAGGAAGATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR GCA 90 bp GATCTTCCTACAAGAACACATCTGAGATGCAATATTAACAACAAGCCCAACATTAGGGAACCCTGTCTCTaGAGTTGTGCGATCAGAGTA +
Preference number: 4 (lower is better)
Translates to: DLPTRTHLRCNINNKPNIREPCL*SCAIRV
Trigger: TACTCTGATCGCACAACTGCAGAGACAGGGTTCCCT...AATGTTGGGCTTGTTGTTAATATTGCATCTCAGATGTGTTCTTGTAGGAAGATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR CCA 90 bp GAATTGTCCCATCAGAACTGCCTGACAGGCATTGCGTGCCATCTCTGTTTAATATGGCCAGGCTATAAATaGAATCTTTGTTTCCACTTA +
Preference number: 4 (lower is better)
Translates to: ELSHQNCLTGIACHLCLIWPGYK*NLCFHL
Trigger: TAAGTGGAAACAAAGATTCCATTTATAGCCTGGCCA...TATTAAACAGAGATGGCACGCAATGCCTGTCAGGCAGTTCTGATGGGACAATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
CDS-3UTR CCA 90 bp CATATTTTTATCCACAGTGATGTCAATTACCCATTGTGGCACTGTTTCATTAAGAGCCCAGCCTTCACGTaGACTTCTGACGGTAATGGA +
Preference number: 4 (lower is better)
Translates to: HIFIHSDVNYPLWHCFIKSPAFT*TSDGNG
Trigger: TCCATTACCGTCAGAAGTCCACGTGAAGGCTGGGCT...CTTAATGAAACAGTGCCACAATGGGTAATTGACATCACTGTGGATAAAAATATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
CDS-3UTR CCA 90 bp TACAATGATTGTTCCCAGTTGATTCATGGCCAGGCTATAAATGGAATCTTTGTTTGCACTCTGCTTCCCTaGGGACAGCTTAATCTACAC +
Preference number: 4 (lower is better)
Translates to: YNDCSQLIHGQAINGIFVCTLLP*GQLNLH
Trigger: GTGTAGATTAAGCTGTCCCCAGGGAAGCAGAGTGCA...AACAAAGATTCCATTTATAGCCTGGCCATGAATCAACTGGGAACAATCATTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
CDS-3UTR CCA 90 bp TTTTTCATAAACATGTTCCATAACTTTTCGGACTTGGAGCATGTCACTAGCAGAAGGCACTTGTGCTTCTaGCTTCATACAGGAGGCTTG +
Preference number: 4 (lower is better)
Translates to: FFINMFHNFSDLEHVTSRRHLCF*LHTGGL
Trigger: CAAGCCTCCTGTATGAAGCCAGAAGCACAAGTGCCT...TCTGCTAGTGACATGCTCCAAGTCCGAAAAGTTATGGAACATGTTTATGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420940.6
CDS-3UTR CCA 90 bp AGCAGTGAGGGAACCCTGTCTCTGCAGTTGTGCGATCAGAGTATCTTAAATAGTAACTTATTAGAAATGTaGCCACGTCTTTGCTCACTT +
Preference number: 4 (lower is better)
Translates to: SSEGTLSLQLCDQSILNSNLLEM*PRLCSL
Trigger: AAGTGAGCAAAGACGTGGCCACATTTCTAATAAGTT...ACTATTTAAGATACTCTGATCGCACAACTGCAGAGACAGGGTTCCCTCACTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR TCA 90 bp CAGTCAATGCTGTTAGAGTATTCACATCCCAAAGGAATATTTGTCTGTCCAACCGGATCTTGCTTGTGCTaGTTGACACTCCATATTCTT +
Preference number: 4 (lower is better)
Translates to: QSMLLEYSHPKGIFVCPTGSCLC*LTLHIL
Trigger: AAGAATATGGAGTGTCAATCAGCACAAGCAAGATCC...GGTTGGACAGACAAATATTCCTTTGGGATGTGAATACTCTAACAGCATTGACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423296.6
CDS-3UTR TCA 90 bp TTCATCATGGTCTTAAATTTTGATGGTGTCATGCTGCTCATCCAGAGCAAGAACTGGACCCTGATACAATaGTTGTTCCCAGTTGATTCA +
Preference number: 4 (lower is better)
Translates to: FIMVLNFDGVMLLIQSKNWTLIQ*LFPVDS
Trigger: TGAATCAACTGGGAACAATCATTGTATCAGGGTCCA...GTTCTTGCTCTGGATGAGCAGCATGACACCATCAAAATTTAAGACCATGATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR TCA 90 bp AATATTTGTCTGTCCAACCCAGCTGATGCTACTAGTTCTTTATCCTTGGCATATCTTTTCAGTGGACCCTaGTACAATGATTGTTCCCAG +
Preference number: 4 (lower is better)
Translates to: NICLSNPADATSSLSLAYLFSGP*YNDCSQ
Trigger: CTGGGAACAATCATTGTATCAGGGTCCACTGAAAAG...ATATGCCAAGGATAAAGAACTAGTAGCATCAGCTGGGTTGGACAGACAAATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000433841.6
CDS-3UTR TCA 90 bp TTTTTCATAAACATGTTCCATAACTTTTCGGACTTGGAGCATGTCACTAGCAGAAGGAGGAGGATCAGCTaGTCTATCAAGCTCCATCTT +
Preference number: 4 (lower is better)
Translates to: FFINMFHNFSDLEHVTSRRRRIS*SIKLHL
Trigger: AAGATGGAGCTTGATAGATCAGCTGATCCTCCTCCT...TCTGCTAGTGACATGCTCCAAGTCCGAAAAGTTATGGAACATGTTTATGAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
CDS-3UTR TCA 90 bp ATACTAGCACCCCCTTTAATAACCTGGTCAGGTTGTGTACAAAGAGGTGTTATATTAAGAATGTGGCACTaGATAATACTAGCACCCCCT +
Preference number: 4 (lower is better)
Translates to: ILAPPLITWSGCVQRGVILRMWH*IILAPP
Trigger: AGGGGGTGCTAGTATTATTCAGTGCCACATTCTTAA...TATAACACCTCTTTGTACACAACCTGACCAGGTTATTAAAGGGGGTGCTAGTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
CDS-3UTR TCA 90 bp CCTTTACGTAATCCTTATGTGTCCTTAATGTTGACATGCAAAATCCCTTGTGTGGTATGTGGGGGCACTTaGAAATATCCATTTCCCTTC +
Preference number: 4 (lower is better)
Translates to: PLRNPYVSLMLTCKIPCVVCGGT*KYPFPF
Trigger: GAAGGGAAATGGATATTTTCAAGTGCCCCCACATAC...CACACAAGGGATTTTGCATGTCAACATTAAGGACACATAAGGATTACGTAAAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413099.6
CDS-3UTR GCA 90 bp GATCTTCCTACAAGAACACATCTGAGATGCAATATTAACAACAAGCCCAACATTATGGACTCGGTATGTTaGTATACATCTCTGCTGGCC +
Preference number: 4 (lower is better)
Translates to: DLPTRTHLRCNINNKPNIMDSVC*YTSLLA
Trigger: GGCCAGCAGAGATGTATAGCAACATACCGAGTCCAT...AATGTTGGGCTTGTTGTTAATATTGCATCTCAGATGTGTTCTTGTAGGAAGATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR GCA 90 bp GATCTTCCTACAAGAACACATCTGAGATGCAATATTAACAACAAGCCCAACATTAAGGCATCATTGACTTaGAGCGCCCAAACACCTTCA +
Preference number: 4 (lower is better)
Translates to: DLPTRTHLRCNINNKPNIKASLT*SAQTPS
Trigger: TGAAGGTGTTTGGGCGCTGCAAGTCAATGATGCCTT...AATGTTGGGCTTGTTGTTAATATTGCATCTCAGATGTGTTCTTGTAGGAAGATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR GCA 90 bp AACCCAGCTGATGCTACTAGTTCTTTATCCTTGGCATATGCTAAGGCCTTTACGTTCAATTTTCTCCTCTaGCAACACAGCAATATCTTC +
Preference number: 4 (lower is better)
Translates to: NPADATSSLSLAYAKAFTFNFLL*QHSNIF
Trigger: GAAGATATTGCTGTGTTGGCAGAGGAGAAAATTGAA...CGTAAAGGCCTTAGCATATGCCAAGGATAAAGAACTAGTAGCATCAGCTGGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413099.6
CDS-3UTR GCA 90 bp GGAACCCTGTCTCTGCAGTTGTGCGATCAGAGTATCTTAAATAGTAAGGTATGGAGCCTTCATATCTACTaGATGAATGGAATGTACTGT +
Preference number: 4 (lower is better)
Translates to: GTLSLQLCDQSILNSKVWSLHIY*MNGMYC
Trigger: ACAGTACATTCCATTCATGCAGTAGATATGAAGGCT...CCATACCTTACTATTTAAGATACTCTGATCGCACAACTGCAGAGACAGGGTTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR CCA 90 bp AGGCTTGTCTTACAGTTTTATGGGGGTGGACCACTGATTTACTCTGAATACAAACCCCCTTTAATAACCTaGTCAGGTTGTGTACAAAGA +
Preference number: 4 (lower is better)
Translates to: RLVLQFYGGGPLIYSEYKPPLIT*SGCVQR
Trigger: TCTTTGTACACAACCTGACCAGGTTATTAAAGGGGG...TTTGTATTCAGAGTAAATCAGTGGTCCACCCCCATAAAACTGTAAGACAAGCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR CCA 90 bp TCTCTGTTTAATAGCAATGCCTTCACATTATCCGTGTGCCCTTTAAGCTTCATTTCGAAGGTCCATATTTaGATCCAAAACCTGGTCCTG +
Preference number: 4 (lower is better)
Translates to: SLFNSNAFTLSVCPLSFISKVHI*IQNLVL
Trigger: CAGGACCAGGTTTTGGATCCAAATATGGACCTTCGA...AATGAAGCTTAAAGGGCACACGGATAATGTGAAGGCATTGCTATTAAACAGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
CDS-3UTR CCA 90 bp TTGAATTTGGGCATATTTTTATCCACAGTGATGTCAATTACCCATTGTGGCACTAAGCAAAGTCTGCACTaGCCTGTTGTCAGTCTTCTG +
Preference number: 4 (lower is better)
Translates to: LNLGIFLSTVMSITHCGTKQSLH*PVVSLL
Trigger: CAGAAGACTGACAACAGGCCAGTGCAGACTTTGCTT...AGTGCCACAATGGGTAATTGACATCACTGTGGATAAAAATATGCCCAAATTCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
CDS-3UTR CCA 90 bp TTTGTTGAATTTGGGCATATTTTTATCCACAGTGATGTCAATTACCCATTGTGGCAGAGCAAGAACCTGTaGTCTCAGCTCGCTTTGTGT +
Preference number: 4 (lower is better)
Translates to: FVEFGHIFIHSDVNYPLWQSKNL*SQLALC
Trigger: ACACAAAGCGAGCTGAGACCACAGGTTCTTGCTCTG...CCACAATGGGTAATTGACATCACTGTGGATAAAAATATGCCCAAATTCAACAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420940.6
CDS-3UTR TCA 90 bp AATATTTGTCTGTCCAACCCAGCTGATGCTACTAGTTCTTTATCCTTGGCATATTGGACCCTGATACAATaGTTGTTCCCAGTTGATTCA +
Preference number: 4 (lower is better)
Translates to: NICLSNPADATSSLSLAYWTLIQ*LFPVDS
Trigger: TGAATCAACTGGGAACAATCATTGTATCAGGGTCCA...ATATGCCAAGGATAAAGAACTAGTAGCATCAGCTGGGTTGGACAGACAAATATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000433841.6
CDS-3UTR TCA 90 bp GATCTTCCTACAAGAACACATCTGAGATGCAATATTAACAACAAGCCCAACATTCTTTTCAGTGGACCCTaGTACAATGATTGTTCCCAG +
Preference number: 4 (lower is better)
Translates to: DLPTRTHLRCNINNKPNILFSGP*YNDCSQ
Trigger: CTGGGAACAATCATTGTATCAGGGTCCACTGAAAAG...AATGTTGGGCTTGTTGTTAATATTGCATCTCAGATGTGTTCTTGTAGGAAGATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR TCA 90 bp TTGAATTTGGGCATATTTTTATCCACAGTGATGTCAATTACCCATTGTGGCACTGTATGTGGGGGCACTTaGAAATATCCATTTCCCTTC +
Preference number: 4 (lower is better)
Translates to: LNLGIFLSTVMSITHCGTVCGGT*KYPFPF
Trigger: GAAGGGAAATGGATATTTTCAAGTGCCCCCACATAC...AGTGCCACAATGGGTAATTGACATCACTGTGGATAAAAATATGCCCAAATTCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
CDS-3UTR GCA 90 bp CTACACATGGAGACTGGTTTCTATATTACATCTCGATTAGTCACTTCAATTGAAAGTGCTGGATCCAGCTaGAGAGCATTGACTCCATTT +
Preference number: 4 (lower is better)
Translates to: LHMETGFYITSRLVTSIESAGSS*RALTPF
Trigger: AAATGGAGTCAATGCTCTGCAGCTGGATCCAGCACT...TTCAATTGAAGTGACTAATCGAGATGTAATATAGAAACCAGTCTCCATGTGTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302313.10
ENST00000413099.6
ENST00000420940.6
CDS-3UTR GCA 90 bp GGAACCCTGTCTCTGCAGTTGTGCGATCAGAGTATCTTAAATAGTAAGGTATGGATGGTGTTCCATAGATaGTATATATGGATCTTGCTT +
Preference number: 4 (lower is better)
Translates to: GTLSLQLCDQSILNSKVWMVFHR*YIWILL
Trigger: AAGCAAGATCCATATATAGCATCTATGGAACACCAT...CCATACCTTACTATTTAAGATACTCTGATCGCACAACTGCAGAGACAGGGTTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR GCA 90 bp CATGCAAAATCCCTTGTGTGCATTCCATACTTTTACTGTCGTGTCAGAAGAAGCTCCTTAATGTTGACATaGAAAATCCCTTGTGTGCAT +
Preference number: 4 (lower is better)
Translates to: HAKSLVCIPYFYCRVRRSSLMLT*KIPCVH
Trigger: ATGCACACAAGGGATTTTGCATGTCAACATTAAGGA...GCTTCTTCTGACACGACAGTAAAAGTATGGAATGCACACAAGGGATTTTGCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000433841.6
CDS-3UTR CCA 90 bp TTCATCATGGTCTTAAATTTTGATGGTGTCATGCTGCTCATCCAGAGCAAGAACTTCCCAGTTGATTCATaGCCAGGCTATAAATGGAAT +
Preference number: 4 (lower is better)
Translates to: FIMVLNFDGVMLLIQSKNFPVDS*PGYKWN
Trigger: ATTCCATTTATAGCCTGGCCATGAATCAACTGGGAA...GTTCTTGCTCTGGATGAGCAGCATGACACCATCAAAATTTAAGACCATGATGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR CCA 90 bp TCAATGCTGTTAGAGTATTCACATCCCAAAGGAATATTTGTCTGTCCAACCCAGTTCCCAGTTGATTCATaGCCAGGCTATAAATGGAAT +
Preference number: 4 (lower is better)
Translates to: SMLLEYSHPKGIFVCPTQFPVDS*PGYKWN
Trigger: ATTCCATTTATAGCCTGGCCATGAATCAACTGGGAA...CTGGGTTGGACAGACAAATATTCCTTTGGGATGTGAATACTCTAACAGCATTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000433841.6
CDS-3UTR CCA 90 bp AGGCTTGTCTTACAGTTTTATGGGGGTGGACCACTGATTTACTCTGAATACAAACAAACACCTTCATCATaGACTCGGTATGTTGCTATA +
Preference number: 4 (lower is better)
Translates to: RLVLQFYGGGPLIYSEYKQTPSS*TRYVAI
Trigger: TATAGCAACATACCGAGTCCATGATGAAGGTGTTTG...TTTGTATTCAGAGTAAATCAGTGGTCCACCCCCATAAAACTGTAAGACAAGCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR CCA 90 bp GATCTTCCTACAAGAACACATCTGAGATGCAATATTAACAACAAGCCCAACATTTCGAAGGTCCATATTTaGATCCAAAACCTGGTCCTG +
Preference number: 4 (lower is better)
Translates to: DLPTRTHLRCNINNKPNISKVHI*IQNLVL
Trigger: CAGGACCAGGTTTTGGATCCAAATATGGACCTTCGA...AATGTTGGGCTTGTTGTTAATATTGCATCTCAGATGTGTTCTTGTAGGAAGATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR CCA 90 bp CTACACATGGAGACTGGTTTCTATATTACATCTCGATTAGTCACTTCAATTGAAAAGCAAAGTCTGCACTaGCCTGTTGTCAGTCTTCTG +
Preference number: 4 (lower is better)
Translates to: LHMETGFYITSRLVTSIEKQSLH*PVVSLL
Trigger: CAGAAGACTGACAACAGGCCAGTGCAGACTTTGCTT...TTCAATTGAAGTGACTAATCGAGATGTAATATAGAAACCAGTCTCCATGTGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302313.10
ENST00000413099.6
ENST00000420940.6
CDS-3UTR CCA 90 bp AGGCTTGTCTTACAGTTTTATGGGGGTGGACCACTGATTTACTCTGAATACAAATGTCTTACAGTTTTATaGGGGTGGACCACTGATTTA +
Preference number: 4 (lower is better)
Translates to: RLVLQFYGGGPLIYSEYKCLTVL*GWTTDL
Trigger: TAAATCAGTGGTCCACCCCCATAAAACTGTAAGACA...TTTGTATTCAGAGTAAATCAGTGGTCCACCCCCATAAAACTGTAAGACAAGCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR TCA 90 bp GATCTTCCTACAAGAACACATCTGAGATGCAATATTAACAACAAGCCCAACATTGGATCTTGCTTGTGCTaGTTGACACTCCATATTCTT +
Preference number: 4 (lower is better)
Translates to: DLPTRTHLRCNINNKPNIGSCLC*LTLHIL
Trigger: AAGAATATGGAGTGTCAATCAGCACAAGCAAGATCC...AATGTTGGGCTTGTTGTTAATATTGCATCTCAGATGTGTTCTTGTAGGAAGATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR TCA 90 bp ATCTTTTGCAGAAACCCAGGCAGCAAAACAATCACTTTCATCCAAAGTAATAGTGGATCTTGCTTGTGCTaGTTGACACTCCATATTCTT +
Preference number: 4 (lower is better)
Translates to: IFCRNPGSKTITFIQSNSGSCLC*LTLHIL
Trigger: AAGAATATGGAGTGTCAATCAGCACAAGCAAGATCC...ACTATTACTTTGGATGAAAGTGATTGTTTTGCTGCCTGGGTTTCTGCAAAAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420940.6
CDS-3UTR TCA 90 bp CAGTCAATGCTGTTAGAGTATTCACATCCCAAAGGAATATTTGTCTGTCCAACCTTAAAGAAGAAGTTGTaGCAGTGTTATTTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: QSMLLEYSHPKGIFVCPTLKKKL*QCYLRQ
Trigger: CTGCCTCAAATAACACTGTCACAACTTCTTCTTTAA...GGTTGGACAGACAAATATTCCTTTGGGATGTGAATACTCTAACAGCATTGACTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000413099.6
ENST00000423296.6
ENST00000433841.6
CDS-3UTR TCA 90 bp GCAGTCAATGCTGTTAGAGTATTCACATCCCAAAGGAATATTTGTCTGTCCAACTTAAAGAAGAAGTTGTaGCAGTGTTATTTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: AVNAVRVFTSQRNICLSNLKKKL*QCYLRQ
Trigger: CTGCCTCAAATAACACTGTCACAACTTCTTCTTTAA...GTTGGACAGACAAATATTCCTTTGGGATGTGAATACTCTAACAGCATTGACTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000413099.6
ENST00000423296.6
ENST00000433841.6
CDS-3UTR TCA 90 bp TTTTTCATAAACATGTTCCATAACTTTTCGGACTTGGAGCATGTCACTAGCAGATGGACCCTGATACAATaGTTGTTCCCAGTTGATTCA +
Preference number: 4 (lower is better)
Translates to: FFINMFHNFSDLEHVTSRWTLIQ*LFPVDS
Trigger: TGAATCAACTGGGAACAATCATTGTATCAGGGTCCA...TCTGCTAGTGACATGCTCCAAGTCCGAAAAGTTATGGAACATGTTTATGAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
CDS-3UTR TCA 90 bp CATATTTTTATCCACAGTGATGTCAATTACCCATTGTGGCACTGTTTCATTAAGATTCAATTTTGGATCTaGCCCATCAGGGCTGCTGAA +
Preference number: 4 (lower is better)
Translates to: HIFIHSDVNYPLWHCFIKIQFWI*PIRAAE
Trigger: TTCAGCAGCCCTGATGGGTCAGATCCAAAATTGAAT...CTTAATGAAACAGTGCCACAATGGGTAATTGACATCACTGTGGATAAAAATATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
CDS-3UTR GCA 90 bp TCAATGCTGTTAGAGTATTCACATCCCAAAGGAATATTTGTCTGTCCAACCCAGGCAAAATCCCTTGTGTaGATTCCATACTTTTACTGT +
Preference number: 4 (lower is better)
Translates to: SMLLEYSHPKGIFVCPTQAKSLV*IPYFYC
Trigger: ACAGTAAAAGTATGGAATGCACACAAGGGATTTTGC...CTGGGTTGGACAGACAAATATTCCTTTGGGATGTGAATACTCTAACAGCATTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000413099.6
ENST00000423296.6
ENST00000433841.6
CDS-3UTR GCA 90 bp CAGTCAATGCTGTTAGAGTATTCACATCCCAAAGGAATATTTGTCTGTCCAACCGCAAAATCCCTTGTGTaGATTCCATACTTTTACTGT +
Preference number: 4 (lower is better)
Translates to: QSMLLEYSHPKGIFVCPTAKSLV*IPYFYC
Trigger: ACAGTAAAAGTATGGAATGCACACAAGGGATTTTGC...GGTTGGACAGACAAATATTCCTTTGGGATGTGAATACTCTAACAGCATTGACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000413099.6
ENST00000423296.6
ENST00000433841.6
CDS-3UTR GCA 90 bp CAGTCAATGCTGTTAGAGTATTCACATCCCAAAGGAATATTTGTCTGTCCAACCTCCTTAATGTTGACATaGAAAATCCCTTGTGTGCAT +
Preference number: 4 (lower is better)
Translates to: QSMLLEYSHPKGIFVCPTSLMLT*KIPCVH
Trigger: ATGCACACAAGGGATTTTGCATGTCAACATTAAGGA...GGTTGGACAGACAAATATTCCTTTGGGATGTGAATACTCTAACAGCATTGACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000413099.6
ENST00000423296.6
ENST00000433841.6
CDS-3UTR GCA 90 bp TCAATGCTGTTAGAGTATTCACATCCCAAAGGAATATTTGTCTGTCCAACCCAGTCCTTAATGTTGACATaGAAAATCCCTTGTGTGCAT +
Preference number: 4 (lower is better)
Translates to: SMLLEYSHPKGIFVCPTQSLMLT*KIPCVH
Trigger: ATGCACACAAGGGATTTTGCATGTCAACATTAAGGA...CTGGGTTGGACAGACAAATATTCCTTTGGGATGTGAATACTCTAACAGCATTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000413099.6
ENST00000423296.6
ENST00000433841.6
CDS-3UTR CCA 90 bp TCAATGCTGTTAGAGTATTCACATCCCAAAGGAATATTTGTCTGTCCAACCCAGCTAGTTCTTTATCCTTaGCATATGCTAAGGCCTTTA +
Preference number: 4 (lower is better)
Translates to: SMLLEYSHPKGIFVCPTQLVLYP*HMLRPL
Trigger: TAAAGGCCTTAGCATATGCCAAGGATAAAGAACTAG...CTGGGTTGGACAGACAAATATTCCTTTGGGATGTGAATACTCTAACAGCATTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000413099.6
ENST00000423296.6
ENST00000433841.6
CDS-3UTR CCA 90 bp TCAATGCTGTTAGAGTATTCACATCCCAAAGGAATATTTGTCTGTCCAACCCAGTGGCCAGGCTATAAATaGAATCTTTGTTTCCACTTA +
Preference number: 4 (lower is better)
Translates to: SMLLEYSHPKGIFVCPTQWPGYK*NLCFHL
Trigger: TAAGTGGAAACAAAGATTCCATTTATAGCCTGGCCA...CTGGGTTGGACAGACAAATATTCCTTTGGGATGTGAATACTCTAACAGCATTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000413099.6
ENST00000423296.6
ENST00000433841.6
CDS-3UTR CCA 90 bp AAAGAAGCTGGTTGCTCTCTGAGGAAGGGAGAAAGACCATTTCAACTTATTAGAGACTGTCGAATTTTCTaGAAACTGTATTACGGTTTG +
Preference number: 4 (lower is better)
Translates to: KEAGCSLRKGERPFQLIRDCRIF*KLYYGL
Trigger: CAAACCGTAATACAGTTTCCAGAAAATTCGACAGTC...TCTAATAAGTTGAAATGGTCTTTCTCCCTTCCTCAGAGAGCAACCAGCTTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
3UTR CAA 72 bp CTAAGGCCTTTACGTAATCCTTATGTGTCCTTAATGTaGACATGCAAAATCCCTTGTGTGCATTCCATACTT +
Preference number: 4 (lower is better)
Translates to: LRPLRNPYVSLM*TCKIPCVHSIL
Trigger: AAGTATGGAATGCACACAAGGGATTTTGCATGTCAACATTAAGGACACATAAGGATTACGTAAAGGCCTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000433841.6
3UTR CAA 72 bp GGGCATATTTTTATCCACAGTGATGTCAATTACCCATaGTGGCACTGTTTCATTAAGAAGCATAGACTCAGT +
Preference number: 4 (lower is better)
Translates to: GHIFIHSDVNYP*WHCFIKKHRLS
Trigger: ACTGAGTCTATGCTTCTTAATGAAACAGTGCCACAATGGGTAATTGACATCACTGTGGATAAAAATATGCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
CDS-3UTR GCA 90 bp GCAGTCAATGCTGTTAGAGTATTCACATCCCAAAGGAATATTTGTCTGTCCAACATGGTGTTCCATAGATaGTATATATGGATCTTGCTT +
Preference number: 4 (lower is better)
Translates to: AVNAVRVFTSQRNICLSNMVFHR*YIWILL
Trigger: AAGCAAGATCCATATATAGCATCTATGGAACACCAT...GTTGGACAGACAAATATTCCTTTGGGATGTGAATACTCTAACAGCATTGACTGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423296.6
CDS-3UTR GCA 90 bp GGACAGCTTAATCTACACATGGAGACTGGTTTCTATATTACATCTCGATTAGTCGCAAAATCCCTTGTGTaGATTCCATACTTTTACTGT +
Preference number: 4 (lower is better)
Translates to: GQLNLHMETGFYITSRLVAKSLV*IPYFYC
Trigger: ACAGTAAAAGTATGGAATGCACACAAGGGATTTTGC...GACTAATCGAGATGTAATATAGAAACCAGTCTCCATGTGTAGATTAAGCTGTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302313.10
ENST00000413099.6
ENST00000420940.6
CDS-3UTR GCA 90 bp CATATTTTTATCCACAGTGATGTCAATTACCCATTGTGGCACTGTTTCATTAAGTGTAGACTTAGTTGTTaGAACCCAAATTGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: HIFIHSDVNYPLWHCFIKCRLSC*NPNCRR
Trigger: CCTCCTGCAATTTGGGTTGCAACAACTAAGTCTACA...CTTAATGAAACAGTGCCACAATGGGTAATTGACATCACTGTGGATAAAAATATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
CDS-3UTR GCA 90 bp CTTATCATTAAGAATGTGGCACTGAATAATACTAGCACCCCCTTTAATAACCTGTTACCCTTTTGGCATTaGAGACTGTCGAATTTTCTG +
Preference number: 4 (lower is better)
Translates to: LIIKNVALNNTSTPFNNLLPFWH*RLSNFL
Trigger: CAGAAAATTCGACAGTCTGCAATGCCAAAAGGGTAA...CAGGTTATTAAAGGGGGTGCTAGTATTATTCAGTGCCACATTCTTAATGATAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000420940.6
CDS-3UTR CCA 90 bp TCAATGCTGTTAGAGTATTCACATCCCAAAGGAATATTTGTCTGTCCAACCCAGCATAGATGCTATATATaGATCTTGCTTGTGCTGATT +
Preference number: 4 (lower is better)
Translates to: SMLLEYSHPKGIFVCPTQHRCYI*ILLVLI
Trigger: AATCAGCACAAGCAAGATCCATATATAGCATCTATG...CTGGGTTGGACAGACAAATATTCCTTTGGGATGTGAATACTCTAACAGCATTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423296.6
CDS-3UTR CCA 90 bp AATATTTGTCTGTCCAACCCAGCTGATGCTACTAGTTCTTTATCCTTGGCATATCTAGTTCTTTATCCTTaGCATATGCTAAGGCCTTTA +
Preference number: 4 (lower is better)
Translates to: NICLSNPADATSSLSLAYLVLYP*HMLRPL
Trigger: TAAAGGCCTTAGCATATGCCAAGGATAAAGAACTAG...ATATGCCAAGGATAAAGAACTAGTAGCATCAGCTGGGTTGGACAGACAAATATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000433841.6
CDS-3UTR CCA 90 bp CCATTACAACAGAGTACAATGTCGTTTACCCAATCAGTATGGTGTTCCATAGATCTAGTTCTTTATCCTTaGCATATGCTAAGGCCTTTA +
Preference number: 4 (lower is better)
Translates to: PLQQSTMSFTQSVWCSIDLVLYP*HMLRPL
Trigger: TAAAGGCCTTAGCATATGCCAAGGATAAAGAACTAG...ATCTATGGAACACCATACTGATTGGGTAAACGACATTGTACTCTGTTGTAATGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433841.6
CDS-3UTR CCA 90 bp CGAATTTTCTGGAAACTGTATTACGGTTTGACTGGAGGGGAAAGAAATACAATCTGGCCAGGCTATAAATaGAATCTTTGTTTCCACTTA +
Preference number: 4 (lower is better)
Translates to: RIFWKLYYGLTGGERNTIWPGYK*NLCFHL
Trigger: TAAGTGGAAACAAAGATTCCATTTATAGCCTGGCCA...GATTGTATTTCTTTCCCCTCCAGTCAAACCGTAATACAGTTTCCAGAAAATTCG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR CCA 90 bp CCAGTTGATTCATGGCCAGGCTATAAATGGAATCTTTGTTTCCACTTAAAGAAGTGGCCAGGCTATAAATaGAATCTTTGTTTCCACTTA +
Preference number: 4 (lower is better)
Translates to: PVDSWPGYKWNLCFHLKKWPGYK*NLCFHL
Trigger: TAAGTGGAAACAAAGATTCCATTTATAGCCTGGCCA...CTTCTTTAAGTGGAAACAAAGATTCCATTTATAGCCTGGCCATGAATCAACTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000433841.6
CDS-3UTR CCA 90 bp TACAATGATTGTTCCCAGTTGATTCATGGCCAGGCTATAAATGGAATCTTTGTTCAAACACCTTCATCATaGACTCGGTATGTTGCTATA +
Preference number: 4 (lower is better)
Translates to: YNDCSQLIHGQAINGIFVQTPSS*TRYVAI
Trigger: TATAGCAACATACCGAGTCCATGATGAAGGTGTTTG...AACAAAGATTCCATTTATAGCCTGGCCATGAATCAACTGGGAACAATCATTGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
CDS-3UTR CCA 90 bp TACAATGATTGTTCCCAGTTGATTCATGGCCAGGCTATAAATGGAATCTTTGTTTATTCCAGGAGTGCTTaGAGTAAAAGTCCTCCTAAA +
Preference number: 4 (lower is better)
Translates to: YNDCSQLIHGQAINGIFVYSRSA*SKSPPK
Trigger: TTTAGGAGGACTTTTACTCCAAGCACTCCTGGAATA...AACAAAGATTCCATTTATAGCCTGGCCATGAATCAACTGGGAACAATCATTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
CDS-3UTR GCA 90 bp ATCTTTTGCAGAAACCCAGGCAGCAAAACAATCACTTTCATCCAAAGTAATAGTCTGGTTCTCAAATTGTaGAACAGCAAATTCCCATTA +
Preference number: 4 (lower is better)
Translates to: IFCRNPGSKTITFIQSNSLVLKL*NSKFPL
Trigger: TAATGGGAATTTGCTGTTGCACAATTTGAGAACCAG...ACTATTACTTTGGATGAAAGTGATTGTTTTGCTGCCTGGGTTTCTGCAAAAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420940.6
CDS-3UTR CCA 90 bp CGAATTTTCTGGAAACTGTATTACGGTTTGACTGGAGGGGAAAGAAATACAATCCATAGATGCTATATATaGATCTTGCTTGTGCTGATT +
Preference number: 4 (lower is better)
Translates to: RIFWKLYYGLTGGERNTIHRCYI*ILLVLI
Trigger: AATCAGCACAAGCAAGATCCATATATAGCATCTATG...GATTGTATTTCTTTCCCCTCCAGTCAAACCGTAATACAGTTTCCAGAAAATTCG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR CCA 90 bp TTGAATTTGGGCATATTTTTATCCACAGTGATGTCAATTACCCATTGTGGCACTTGCTCCCCATTTACATaGTTTACTTCATTTTCCTCT +
Preference number: 4 (lower is better)
Translates to: LNLGIFLSTVMSITHCGTCSPFT*FTSFSS
Trigger: AGAGGAAAATGAAGTAAACCATGTAAATGGGGAGCA...AGTGCCACAATGGGTAATTGACATCACTGTGGATAAAAATATGCCCAAATTCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
CDS-3UTR CCA 90 bp CTTATCATTAAGAATGTGGCACTGAATAATACTAGCACCCCCTTTAATAACCTGGACTGTCGAATTTTCTaGAAACTGTATTACGGTTTG +
Preference number: 4 (lower is better)
Translates to: LIIKNVALNNTSTPFNNLDCRIF*KLYYGL
Trigger: CAAACCGTAATACAGTTTCCAGAAAATTCGACAGTC...CAGGTTATTAAAGGGGGTGCTAGTATTATTCAGTGCCACATTCTTAATGATAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420940.6
CDS-3UTR CAA 90 bp CCGTTGGGGATCAGTGGGCTTCCTAGGACTACTCTTGGGGCCATAGAGGAAGGTGAAGTCTTGCTCCCGTaGGGGATCAGTGGGCTTCCT +
Preference number: 5 (lower is better)
Translates to: PLGISGLPRTTLGAIEEGEVLLP*GISGLP
Trigger: AGGAAGCCCACTGATCCCCAACGGGAGCAAGACTTC...ACCTTCCTCTATGGCCCCAAGAGTAGTCCTAGGAAGCCCACTGATCCCCAACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302313.10
ENST00000413099.6
ENST00000420940.6
CDS CCA 90 bp GGACTCTCATCAGGTGATCCAGCTTGCTCACTCCTCCCCTATGCCTaGTATCCAATTCTTGCTGTCACGGCTTCCATGCATGCGGGAATG +
Preference number: 5 (lower is better)
Translates to: GLSSGDPACSLLPYA*YPILAVTASMHAGM
Trigger: CATTCCCGCATGCATGGAAGCCGTGACAGCAAGAATTGGATACCAGGCATAGGGGAGGAGTGAGCAAGCTGGATCACCTGATGAGAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466405.1
CDS-3UTR CAA 90 bp AAGCATAGACTCAGTCTCACCCCCGGAATCTCGGCAGAGCAGCCTGAACAGTGTGAAGGCATCATTGACTaGCAGCGCCCAAACACCTTC +
Preference number: 5 (lower is better)
Translates to: KHRLSLTPGISAEQPEQCEGIID*QRPNTF
Trigger: GAAGGTGTTTGGGCGCTGCAAGTCAATGATGCCTTC...ACACTGTTCAGGCTGCTCTGCCGAGATTCCGGGGGTGAGACTGAGTCTATGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
CDS-3UTR CAA 90 bp CCGTTGGGGATCAGTGGGCTTCCTAGGACTACTCTTGGGGCCATAGAGGAAGGTTTGTTGCAACCCAAATaGCAGGAGGAGGATCAGCTG +
Preference number: 5 (lower is better)
Translates to: PLGISGLPRTTLGAIEEGLLQPK*QEEDQL
Trigger: CAGCTGATCCTCCTCCTGCAATTTGGGTTGCAACAA...ACCTTCCTCTATGGCCCCAAGAGTAGTCCTAGGAAGCCCACTGATCCCCAACGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302313.10
ENST00000413099.6
ENST00000420940.6
CDS-3UTR CAA 90 bp GAGGGTGAGGTCTCCACCGCTCTTCCATATGAAGTGTTTCACTGTTCGAAGGTCGAAGTCTTGCTCCCGTaGGGGATCAGTGGGCTTCCT +
Preference number: 5 (lower is better)
Translates to: EGEVSTALPYEVFHCSKVEVLLP*GISGLP
Trigger: AGGAAGCCCACTGATCCCCAACGGGAGCAAGACTTC...GACCTTCGAACAGTGAAACACTTCATATGGAAGAGCGGTGGAGACCTCACCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
CDS-3UTR CAA 90 bp CACCTCCCTGGGGTTGCCACAAAGCCAGGACATCATGGGAGGTGCAGCATCGCTAATGATTGTTCCCAGTaGATTCATGGCCAGGCTATA +
Preference number: 5 (lower is better)
Translates to: HLPGVATKPGHHGRCSIANDCSQ*IHGQAI
Trigger: TATAGCCTGGCCATGAATCAACTGGGAACAATCATT...AGCGATGCTGCACCTCCCATGATGTCCTGGCTTTGTGGCAACCCCAGGGAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302313.10
CDS-3UTR CAA 90 bp TGGCCAAGGGACCAAAGGCGAATTGTCCCATCAGAACTGCCTGACAGGCATTGCGTCTGCACTGGCCTGTaGTCAGTCTTCTGTACATCT +
Preference number: 5 (lower is better)
Translates to: WPRDQRRIVPSELPDRHCVCTGL*SVFCTS
Trigger: AGATGTACAGAAGACTGACAACAGGCCAGTGCAGAC...GCAATGCCTGTCAGGCAGTTCTGATGGGACAATTCGCCTTTGGTCCCTTGGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
CDS-3UTR CAA 90 bp AGTGAAACTGCTGCACCTCCCTGGGGTTGCCACAAAGCCAGGACATCATGGGAGCTCCTAAATTCAATTTaGGATCTGACCCATCAGGGC +
Preference number: 5 (lower is better)
Translates to: SETAAPPWGCHKARTSWELLNSI*DLTHQG
Trigger: GCCCTGATGGGTCAGATCCAAAATTGAATTTAGGAG...CTCCCATGATGTCCTGGCTTTGTGGCAACCCCAGGGAGGTGCAGCAGTTTCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302313.10
CDS-3UTR CAA 90 bp CACCTCCCTGGGGTTGCCACAAAGCCAGGACATCATGGGAGGTGCAGCATCGCTGATGTCAATTACCCATaGTGGCACTGTTTCATTAAG +
Preference number: 5 (lower is better)
Translates to: HLPGVATKPGHHGRCSIADVNYP*WHCFIK
Trigger: CTTAATGAAACAGTGCCACAATGGGTAATTGACATC...AGCGATGCTGCACCTCCCATGATGTCCTGGCTTTGTGGCAACCCCAGGGAGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302313.10
CDS-3UTR CAA 90 bp AGTGAAACTGCTGCACCTCCCTGGGGTTGCCACAAAGCCAGGACATCATGGGAGTGTGTGGGCTTAAAGTaGAAACAGAGACAGTTGTGG +
Preference number: 5 (lower is better)
Translates to: SETAAPPWGCHKARTSWECVGLK*KQRQLW
Trigger: CCACAACTGTCTCTGTTTCAACTTTAAGCCCACACA...CTCCCATGATGTCCTGGCTTTGTGGCAACCCCAGGGAGGTGCAGCAGTTTCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302313.10
CDS-3UTR CAA 90 bp GCTCACTTCTTCAAAGTGCAGGTGGCAATGGCCTGTCCAGTTTCCAAAAGAAGCGAAGGCATCATTGACTaGCAGCGCCCAAACACCTTC +
Preference number: 5 (lower is better)
Translates to: AHFFKVQVAMACPVSKRSEGIID*QRPNTF
Trigger: GAAGGTGTTTGGGCGCTGCAAGTCAATGATGCCTTC...GCTTCTTTTGGAAACTGGACAGGCCATTGCCACCTGCACTTTGAAGAAGTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR CAA 90 bp GTGGCCACGTCTTTGCTCACTTCTTCAAAGTGCAGGTGGCAATGGCCTGTCCAGCTCCTAAATTCAATTTaGGATCTGACCCATCAGGGC +
Preference number: 5 (lower is better)
Translates to: VATSLLTSSKCRWQWPVQLLNSI*DLTHQG
Trigger: GCCCTGATGGGTCAGATCCAAAATTGAATTTAGGAG...CTGGACAGGCCATTGCCACCTGCACTTTGAAGAAGTGAGCAAAGACGTGGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR CAA 90 bp ATCAGGGCTGCTGAAACCAGCATCTTTTGCAGAAACCCAGGCAGCAAAACAATCCAGCCGTTAGAAGTCTaGCTCCCGTTGGGGATCAGT +
Preference number: 5 (lower is better)
Translates to: IRAAETSIFCRNPGSKTIQPLEV*LPLGIS
Trigger: ACTGATCCCCAACGGGAGCAAGACTTCTAACGGCTG...GATTGTTTTGCTGCCTGGGTTTCTGCAAAAGATGCTGGTTTCAGCAGCCCTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
CDS-3UTR CAA 90 bp TATGTTGCTATACATCTCTGCTGGCCAAGGGACCAAAGGCGAATTGTCCCATCACAGCCGTTAGAAGTCTaGCTCCCGTTGGGGATCAGT +
Preference number: 5 (lower is better)
Translates to: YVAIHLCWPRDQRRIVPSQPLEV*LPLGIS
Trigger: ACTGATCCCCAACGGGAGCAAGACTTCTAACGGCTG...TGATGGGACAATTCGCCTTTGGTCCCTTGGCCAGCAGAGATGTATAGCAACATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
CDS-3UTR CAA 90 bp AGTGAAACTGCTGCACCTCCCTGGGGTTGCCACAAAGCCAGGACATCATGGGAGACTAGTTCTTTATCCTaGGCATATGCTAAGGCCTTT +
Preference number: 5 (lower is better)
Translates to: SETAAPPWGCHKARTSWETSSLS*AYAKAF
Trigger: AAAGGCCTTAGCATATGCCAAGGATAAAGAACTAGT...CTCCCATGATGTCCTGGCTTTGTGGCAACCCCAGGGAGGTGCAGCAGTTTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302313.10
CDS-3UTR CAA 90 bp TTGCACATGTTCTTGGATCCCATACCCGTAACACCTTTTCAGTGGACCCTGATAGGGACCAAAGGCGAATaGTCCCATCAGAACTGCCTG +
Preference number: 5 (lower is better)
Translates to: LHMFLDPIPVTPFQWTLIGTKGE*SHQNCL
Trigger: CAGGCAGTTCTGATGGGACAATTCGCCTTTGGTCCC...TATCAGGGTCCACTGAAAAGGTGTTACGGGTATGGGATCCAAGAACATGTGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
CDS-3UTR CAA 90 bp GCATCATTGACTTGCAGCGCCCAAACACCTTCATCATGGACTCGGTATGTTGCTCATGGACTCGGTATGTaGCTATACATCTCTGCTGGC +
Preference number: 5 (lower is better)
Translates to: ASLTCSAQTPSSWTRYVAHGLGM*LYISAG
Trigger: GCCAGCAGAGATGTATAGCAACATACCGAGTCCATG...AGCAACATACCGAGTCCATGATGAAGGTGTTTGGGCGCTGCAAGTCAATGATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
CDS-3UTR CAA 90 bp GTCTTGCTCCCGTTGGGGATCAGTGGGCTTCCTAGGACTACTCTTGGGGCCATAAATAACCTGGTCAGGTaGTGTACAAAGAGGTGTTAT +
Preference number: 5 (lower is better)
Translates to: VLLPLGISGLPRTTLGAINNLVR*CTKRCY
Trigger: ATAACACCTCTTTGTACACAACCTGACCAGGTTATT...TATGGCCCCAAGAGTAGTCCTAGGAAGCCCACTGATCCCCAACGGGAGCAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302313.10
ENST00000413099.6
ENST00000420940.6
CDS-3UTR CAA 90 bp GTCTTGCTCCCGTTGGGGATCAGTGGGCTTCCTAGGACTACTCTTGGGGCCATAGATGTCAATTACCCATaGTGGCACTGTTTCATTAAG +
Preference number: 5 (lower is better)
Translates to: VLLPLGISGLPRTTLGAIDVNYP*WHCFIK
Trigger: CTTAATGAAACAGTGCCACAATGGGTAATTGACATC...TATGGCCCCAAGAGTAGTCCTAGGAAGCCCACTGATCCCCAACGGGAGCAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302313.10
ENST00000413099.6
ENST00000420940.6
CDS-3UTR CAA 90 bp GCATCATTGACTTGCAGCGCCCAAACACCTTCATCATGGACTCGGTATGTTGCTGTCTGCACTGGCCTGTaGTCAGTCTTCTGTACATCT +
Preference number: 5 (lower is better)
Translates to: ASLTCSAQTPSSWTRYVAVCTGL*SVFCTS
Trigger: AGATGTACAGAAGACTGACAACAGGCCAGTGCAGAC...AGCAACATACCGAGTCCATGATGAAGGTGTTTGGGCGCTGCAAGTCAATGATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
CDS-3UTR CAA 90 bp AAGAAGCTGACTAGCAGTGAGGGAACCCTGTCTCTGCAGTTGTGCGATCAGAGTGGGCTGGTTCTCAAATaGTGCAACAGCAAATTCCCA +
Preference number: 5 (lower is better)
Translates to: KKLTSSEGTLSLQLCDQSGLVLK*CNSKFP
Trigger: TGGGAATTTGCTGTTGCACAATTTGAGAACCAGCCC...ACTCTGATCGCACAACTGCAGAGACAGGGTTCCCTCACTGCTAGTCAGCTTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR CAA 90 bp CTATACATCTCTGCTGGCCAAGGGACCAAAGGCGAATTGTCCCATCAGAACTGCAATGTGGCCACGTCTTaGCTCACTTCTTCAAAGTGC +
Preference number: 5 (lower is better)
Translates to: LYISAGQGTKGELSHQNCNVATS*LTSSKC
Trigger: GCACTTTGAAGAAGTGAGCAAAGACGTGGCCACATT...GCAGTTCTGATGGGACAATTCGCCTTTGGTCCCTTGGCCAGCAGAGATGTATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420940.6
CDS-3UTR CAA 90 bp CCGTTGGGGATCAGTGGGCTTCCTAGGACTACTCTTGGGGCCATAGAGGAAGGTTTTACCCTTTTGGCATaGCAGACTGTCGAATTTTCT +
Preference number: 5 (lower is better)
Translates to: PLGISGLPRTTLGAIEEGFTLLA*QTVEFS
Trigger: AGAAAATTCGACAGTCTGCAATGCCAAAAGGGTAAA...ACCTTCCTCTATGGCCCCAAGAGTAGTCCTAGGAAGCCCACTGATCCCCAACGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR CAA 90 bp GTGGCCACGTCTTTGCTCACTTCTTCAAAGTGCAGGTGGCAATGGCCTGTCCAGCAGATTTTTACCCTTTaGGCATTGCAGACTGTCGAA +
Preference number: 5 (lower is better)
Translates to: VATSLLTSSKCRWQWPVQQIFTL*ALQTVE
Trigger: TTCGACAGTCTGCAATGCCAAAAGGGTAAAAATCTG...CTGGACAGGCCATTGCCACCTGCACTTTGAAGAAGTGAGCAAAGACGTGGCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS CCA 90 bp CCTGGTGGCCAGCAGAGAATCTTCAGCAGAGTAAGCCTCAGTCGATaGGACTCAATGATTCCTCAACCAGCATGGTTTACTTCATTTTCC +
Preference number: 5 (lower is better)
Translates to: PGGQQRIFSRVSLSR*DSMIPQPAWFTSFS
Trigger: GGAAAATGAAGTAAACCATGCTGGTTGAGGAATCATTGAGTCCCATCGACTGAGGCTTACTCTGCTGAAGATTCTCTGCTGGCCACCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463198.1
CDS-3UTR CAA 90 bp AAGGCATCATTGACTTGCAGCGCCCAAACACCTTCATCATGGACTCGGTATGTTTCCAGCTGCAGAGCATaGACTCCATTTCGGTTGTAC +
Preference number: 5 (lower is better)
Translates to: KASLTCSAQTPSSWTRYVSSCRA*TPFRLY
Trigger: GTACAACCGAAATGGAGTCAATGCTCTGCAGCTGGA...AACATACCGAGTCCATGATGAAGGTGTTTGGGCGCTGCAAGTCAATGATGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
CDS-3UTR CAA 90 bp GCACATGTTCTTGGATCCCATACCCGTAACACCTTTTCAGTGGACCCTGATACATCCAGCTGCAGAGCATaGACTCCATTTCGGTTGTAC +
Preference number: 5 (lower is better)
Translates to: AHVLGSHTRNTFSVDPDTSSCRA*TPFRLY
Trigger: GTACAACCGAAATGGAGTCAATGCTCTGCAGCTGGA...TGTATCAGGGTCCACTGAAAAGGTGTTACGGGTATGGGATCCAAGAACATGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000413099.6
ENST00000420940.6
ENST00000433841.6
CDS-3UTR CAA 90 bp AAGAAGCTGACTAGCAGTGAGGGAACCCTGTCTCTGCAGTTGTGCGATCAGAGTTTCGAAGGTCCATATTaGGATCCAAAACCTGGTCCT +
Preference number: 5 (lower is better)
Translates to: KKLTSSEGTLSLQLCDQSFEGPY*DPKPGP
Trigger: AGGACCAGGTTTTGGATCCAAATATGGACCTTCGAA...ACTCTGATCGCACAACTGCAGAGACAGGGTTCCCTCACTGCTAGTCAGCTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR CAA 90 bp CTCGGTATGTTGCTATACATCTCTGCTGGCCAAGGGACCAAAGGCGAATTGTCCTGTGTGGGCTTAAAGTaGAAACAGAGACAGTTGTGG +
Preference number: 5 (lower is better)
Translates to: LGMLLYISAGQGTKGELSCVGLK*KQRQLW
Trigger: CCACAACTGTCTCTGTTTCAACTTTAAGCCCACACA...GGACAATTCGCCTTTGGTCCCTTGGCCAGCAGAGATGTATAGCAACATACCGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420940.6
CDS-3UTR CAA 90 bp CTTCTGACGGTAATGGAGGGTGAGGTCTCCACCGCTCTTCCATATGAAGTGTTTGGGCTGGTTCTCAAATaGTGCAACAGCAAATTCCCA +
Preference number: 5 (lower is better)
Translates to: LLTVMEGEVSTALPYEVFGLVLK*CNSKFP
Trigger: TGGGAATTTGCTGTTGCACAATTTGAGAACCAGCCC...AAACACTTCATATGGAAGAGCGGTGGAGACCTCACCCTCCATTACCGTCAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420940.6
CDS-3UTR CAA 90 bp GTCATGCTGCTCATCCAGAGCAAGAACCTGTGGTCTCAGCTCGCTTTGTGTAAAAATGTGGCCACGTCTTaGCTCACTTCTTCAAAGTGC +
Preference number: 5 (lower is better)
Translates to: VMLLIQSKNLWSQLALCKNVATS*LTSSKC
Trigger: GCACTTTGAAGAAGTGAGCAAAGACGTGGCCACATT...TTTACACAAAGCGAGCTGAGACCACAGGTTCTTGCTCTGGATGAGCAGCATGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR CAA 90 bp GGAACCCTGTCTCTGCAGTTGTGCGATCAGAGTATCTTAAATAGTAAGGTATGGGCAAAACCCATTTCTTaGCTCAAAGGCCCCTCGGGC +
Preference number: 5 (lower is better)
Translates to: GTLSLQLCDQSILNSKVWAKPIS*LKGPSG
Trigger: GCCCGAGGGGCCTTTGAGCAAAGAAATGGGTTTTGC...CCATACCTTACTATTTAAGATACTCTGATCGCACAACTGCAGAGACAGGGTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS GCA 90 bp GAGTCTCGACCGGCTGTGAAAAGTCTATTTAGTGCTGGATCCAGCTaGAGAGCATTGACTCCATTTCGGTTGTACTTCTCCACTTCATCT +
Preference number: 5 (lower is better)
Translates to: ESRPAVKSLFSAGSS*RALTPFRLYFSTSS
Trigger: AGATGAAGTGGAGAAGTACAACCGAAATGGAGTCAATGCTCTGCAGCTGGATCCAGCACTAAATAGACTTTTCACAGCCGGTCGAGACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302313.10
ENST00000413099.6
ENST00000420940.6
ENST00000423296.6
ENST00000433841.6
ENST00000441361.1
CDS CCA 90 bp ACCCAAAGGCATGTAACTCTTTATGAGCACCAGCACTGGAAAAATTaGGGCTGTAGTCCTCAAGTCCACTTACCTGGTCCTGGCACAAAA +
Preference number: 5 (lower is better)
Translates to: TQRHVTLYEHQHWKN*GCSPQVHLPGPGTK
Trigger: TTTTGTGCCAGGACCAGGTAAGTGGACTTGAGGACTACAGCCCCAATTTTTCCAGTGCTGGTGCTCATAAAGAGTTACATGCCTTTGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466405.1
CDS-3UTR CAA 90 bp AGCAGTGAGGGAACCCTGTCTCTGCAGTTGTGCGATCAGAGTATCTTAAATAGTTCCAGCTGCAGAGCATaGACTCCATTTCGGTTGTAC +
Preference number: 5 (lower is better)
Translates to: SSEGTLSLQLCDQSILNSSSCRA*TPFRLY
Trigger: GTACAACCGAAATGGAGTCAATGCTCTGCAGCTGGA...ACTATTTAAGATACTCTGATCGCACAACTGCAGAGACAGGGTTCCCTCACTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR CAA 90 bp TCCCATACCCGTAACACCTTTTCAGTGGACCCTGATACAATGATTGTTCCCAGTTTGTTGCAACCCAAATaGCAGGAGGAGGATCAGCTG +
Preference number: 5 (lower is better)
Translates to: SHTRNTFSVDPDTMIVPSLLQPK*QEEDQL
Trigger: CAGCTGATCCTCCTCCTGCAATTTGGGTTGCAACAA...ACTGGGAACAATCATTGTATCAGGGTCCACTGAAAAGGTGTTACGGGTATGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
CDS-3UTR CAA 90 bp CTTCTGACGGTAATGGAGGGTGAGGTCTCCACCGCTCTTCCATATGAAGTGTTTTTCGAAGGTCCATATTaGGATCCAAAACCTGGTCCT +
Preference number: 5 (lower is better)
Translates to: LLTVMEGEVSTALPYEVFFEGPY*DPKPGP
Trigger: AGGACCAGGTTTTGGATCCAAATATGGACCTTCGAA...AAACACTTCATATGGAAGAGCGGTGGAGACCTCACCCTCCATTACCGTCAGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
CDS-3UTR CAA 90 bp CGTCTTTGCTCACTTCTTCAAAGTGCAGGTGGCAATGGCCTGTCCAGTTTCCAACTTCATACAGGAGGCTaGTCTTACAGTTTTATGGGG +
Preference number: 5 (lower is better)
Translates to: RLCSLLQSAGGNGLSSFQLHTGG*SYSFMG
Trigger: CCCCATAAAACTGTAAGACAAGCCTCCTGTATGAAG...TTGGAAACTGGACAGGCCATTGCCACCTGCACTTTGAAGAAGTGAGCAAAGACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR CAA 90 bp CTTCAAAGTGCAGGTGGCAATGGCCTGTCCAGTTTCCAAAAGAAGCTGACTAGCTTGACTCCATTTCGGTaGTACTTCTCCACTTCATCT +
Preference number: 5 (lower is better)
Translates to: LQSAGGNGLSSFQKKLTSLTPFR*YFSTSS
Trigger: AGATGAAGTGGAGAAGTACAACCGAAATGGAGTCAA...GCTAGTCAGCTTCTTTTGGAAACTGGACAGGCCATTGCCACCTGCACTTTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR CAA 90 bp GTTTTGCACATGTTCTTGGATCCCATACCCGTAACACCTTTTCAGTGGACCCTGGTTTTGCACATGTTCTaGGATCCCATACCCGTAACA +
Preference number: 5 (lower is better)
Translates to: VLHMFLDPIPVTPFQWTLVLHMF*DPIPVT
Trigger: TGTTACGGGTATGGGATCCAAGAACATGTGCAAAAC...CAGGGTCCACTGAAAAGGTGTTACGGGTATGGGATCCAAGAACATGTGCAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000413099.6
ENST00000420940.6
ENST00000433841.6
CDS-3UTR CAA 90 bp GGAACCCTGTCTCTGCAGTTGTGCGATCAGAGTATCTTAAATAGTAAGGTATGGCATGGACTCGGTATGTaGCTATACATCTCTGCTGGC +
Preference number: 5 (lower is better)
Translates to: GTLSLQLCDQSILNSKVWHGLGM*LYISAG
Trigger: GCCAGCAGAGATGTATAGCAACATACCGAGTCCATG...CCATACCTTACTATTTAAGATACTCTGATCGCACAACTGCAGAGACAGGGTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR CAA 90 bp AACCCAGCTGATGCTACTAGTTCTTTATCCTTGGCATATGCTAAGGCCTTTACGCATGGACTCGGTATGTaGCTATACATCTCTGCTGGC +
Preference number: 5 (lower is better)
Translates to: NPADATSSLSLAYAKAFTHGLGM*LYISAG
Trigger: GCCAGCAGAGATGTATAGCAACATACCGAGTCCATG...CGTAAAGGCCTTAGCATATGCCAAGGATAAAGAACTAGTAGCATCAGCTGGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413099.6
CDS-3UTR CAA 90 bp GTTTTGCACATGTTCTTGGATCCCATACCCGTAACACCTTTTCAGTGGACCCTGCTCCTAAATTCAATTTaGGATCTGACCCATCAGGGC +
Preference number: 5 (lower is better)
Translates to: VLHMFLDPIPVTPFQWTLLLNSI*DLTHQG
Trigger: GCCCTGATGGGTCAGATCCAAAATTGAATTTAGGAG...CAGGGTCCACTGAAAAGGTGTTACGGGTATGGGATCCAAGAACATGTGCAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
CDS-3UTR CAA 90 bp CTTCTGACGGTAATGGAGGGTGAGGTCTCCACCGCTCTTCCATATGAAGTGTTTTGTATGTGGGGGCACTaGAAAATATCCATTTCCCTT +
Preference number: 5 (lower is better)
Translates to: LLTVMEGEVSTALPYEVFCMWGH*KISISL
Trigger: AAGGGAAATGGATATTTTCAAGTGCCCCCACATACA...AAACACTTCATATGGAAGAGCGGTGGAGACCTCACCCTCCATTACCGTCAGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
CDS-3UTR CAA 90 bp TTCATCATGGTCTTAAATTTTGATGGTGTCATGCTGCTCATCCAGAGCAAGAACCAGCCGTTAGAAGTCTaGCTCCCGTTGGGGATCAGT +
Preference number: 5 (lower is better)
Translates to: FIMVLNFDGVMLLIQSKNQPLEV*LPLGIS
Trigger: ACTGATCCCCAACGGGAGCAAGACTTCTAACGGCTG...GTTCTTGCTCTGGATGAGCAGCATGACACCATCAAAATTTAAGACCATGATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR CAA 90 bp AAGAAGCTGACTAGCAGTGAGGGAACCCTGTCTCTGCAGTTGTGCGATCAGAGTACCAAAAGCACACTGTaGTATCCAACAGATAGAAAG +
Preference number: 5 (lower is better)
Translates to: KKLTSSEGTLSLQLCDQSTKSTL*YPTDRK
Trigger: CTTTCTATCTGTTGGATACAACAGTGTGCTTTTGGT...ACTCTGATCGCACAACTGCAGAGACAGGGTTCCCTCACTGCTAGTCAGCTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR CAA 90 bp ATCAGGGCTGCTGAAACCAGCATCTTTTGCAGAAACCCAGGCAGCAAAACAATCTTGACTCCATTTCGGTaGTACTTCTCCACTTCATCT +
Preference number: 5 (lower is better)
Translates to: IRAAETSIFCRNPGSKTILTPFR*YFSTSS
Trigger: AGATGAAGTGGAGAAGTACAACCGAAATGGAGTCAA...GATTGTTTTGCTGCCTGGGTTTCTGCAAAAGATGCTGGTTTCAGCAGCCCTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
CDS-3UTR CAA 90 bp CTTCTGACGGTAATGGAGGGTGAGGTCTCCACCGCTCTTCCATATGAAGTGTTTGACATGCAAAATCCCTaGTGTGCATTCCATACTTTT +
Preference number: 5 (lower is better)
Translates to: LLTVMEGEVSTALPYEVFDMQNP*CAFHTF
Trigger: AAAAGTATGGAATGCACACAAGGGATTTTGCATGTC...AAACACTTCATATGGAAGAGCGGTGGAGACCTCACCCTCCATTACCGTCAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
CDS-3UTR CAA 90 bp CTCGGTATGTTGCTATACATCTCTGCTGGCCAAGGGACCAAAGGCGAATTGTCCTATGTGTCCTTAATGTaGACATGCAAAATCCCTTGT +
Preference number: 5 (lower is better)
Translates to: LGMLLYISAGQGTKGELSYVSLM*TCKIPC
Trigger: ACAAGGGATTTTGCATGTCAACATTAAGGACACATA...GGACAATTCGCCTTTGGTCCCTTGGCCAGCAGAGATGTATAGCAACATACCGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
CDS-3UTR CAA 90 bp TATGTTGCTATACATCTCTGCTGGCCAAGGGACCAAAGGCGAATTGTCCCATCAAATGATTGTTCCCAGTaGATTCATGGCCAGGCTATA +
Preference number: 5 (lower is better)
Translates to: YVAIHLCWPRDQRRIVPSNDCSQ*IHGQAI
Trigger: TATAGCCTGGCCATGAATCAACTGGGAACAATCATT...TGATGGGACAATTCGCCTTTGGTCCCTTGGCCAGCAGAGATGTATAGCAACATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
CDS-3UTR CAA 90 bp TTGCACATGTTCTTGGATCCCATACCCGTAACACCTTTTCAGTGGACCCTGATAGTTTTGCACATGTTCTaGGATCCCATACCCGTAACA +
Preference number: 5 (lower is better)
Translates to: LHMFLDPIPVTPFQWTLIVLHMF*DPIPVT
Trigger: TGTTACGGGTATGGGATCCAAGAACATGTGCAAAAC...TATCAGGGTCCACTGAAAAGGTGTTACGGGTATGGGATCCAAGAACATGTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000413099.6
ENST00000420940.6
ENST00000433841.6
CDS-3UTR CAA 90 bp TACAATGATTGTTCCCAGTTGATTCATGGCCAGGCTATAAATGGAATCTTTGTTGAAGTCTTGCTCCCGTaGGGGATCAGTGGGCTTCCT +
Preference number: 5 (lower is better)
Translates to: YNDCSQLIHGQAINGIFVEVLLP*GISGLP
Trigger: AGGAAGCCCACTGATCCCCAACGGGAGCAAGACTTC...AACAAAGATTCCATTTATAGCCTGGCCATGAATCAACTGGGAACAATCATTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
CDS-3UTR CAA 90 bp CTTCACAAATTAGCACCCGAATGTCAGGGTTTCTTAGGTCTGTACAATAAATCTGCAAAACCCATTTCTTaGCTCAAAGGCCCCTCGGGC +
Preference number: 5 (lower is better)
Translates to: LHKLAPECQGFLGLYNKSAKPIS*LKGPSG
Trigger: GCCCGAGGGGCCTTTGAGCAAAGAAATGGGTTTTGC...AGATTTATTGTACAGACCTAAGAAACCCTGACATTCGGGTGCTAATTTGTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420940.6
CDS-3UTR CAA 90 bp TCCCATACCCGTAACACCTTTTCAGTGGACCCTGATACAATGATTGTTCCCAGTTTGACTCCATTTCGGTaGTACTTCTCCACTTCATCT +
Preference number: 5 (lower is better)
Translates to: SHTRNTFSVDPDTMIVPSLTPFR*YFSTSS
Trigger: AGATGAAGTGGAGAAGTACAACCGAAATGGAGTCAA...ACTGGGAACAATCATTGTATCAGGGTCCACTGAAAAGGTGTTACGGGTATGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000413099.6
ENST00000420940.6
ENST00000433841.6
CDS-3UTR CAA 90 bp GCAGTCAATGCTGTTAGAGTATTCACATCCCAAAGGAATATTTGTCTGTCCAACTCCAGCTGCAGAGCATaGACTCCATTTCGGTTGTAC +
Preference number: 5 (lower is better)
Translates to: AVNAVRVFTSQRNICLSNSSCRA*TPFRLY
Trigger: GTACAACCGAAATGGAGTCAATGCTCTGCAGCTGGA...GTTGGACAGACAAATATTCCTTTGGGATGTGAATACTCTAACAGCATTGACTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000413099.6
ENST00000423296.6
ENST00000433841.6
CDS-3UTR CAA 90 bp TTTTTCATAAACATGTTCCATAACTTTTCGGACTTGGAGCATGTCACTAGCAGAGGGACCAAAGGCGAATaGTCCCATCAGAACTGCCTG +
Preference number: 5 (lower is better)
Translates to: FFINMFHNFSDLEHVTSRGTKGE*SHQNCL
Trigger: CAGGCAGTTCTGATGGGACAATTCGCCTTTGGTCCC...TCTGCTAGTGACATGCTCCAAGTCCGAAAAGTTATGGAACATGTTTATGAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
CDS-3UTR CAA 90 bp ATCTTCCTGTCCCTTCCACCAGAATACACATGTGTGAAGGCATCATTGACTTGCCTATCAAGCTCCATCTaGAGAACTGGTGCTTTTTCT +
Preference number: 5 (lower is better)
Translates to: IFLSLPPEYTCVKASLTCLSSSI*RTGAFS
Trigger: AGAAAAAGCACCAGTTCTCAAGATGGAGCTTGATAG...GCAAGTCAATGATGCCTTCACACATGTGTATTCTGGTGGAAGGGACAGGAAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
CDS-3UTR CAA 90 bp CGAATTGTCCCATCAGAACTGCCTGACAGGCATTGCGTGCCATCTCTGTTTAATACCAAAAGCACACTGTaGTATCCAACAGATAGAAAG +
Preference number: 5 (lower is better)
Translates to: RIVPSELPDRHCVPSLFNTKSTL*YPTDRK
Trigger: CTTTCTATCTGTTGGATACAACAGTGTGCTTTTGGT...ATTAAACAGAGATGGCACGCAATGCCTGTCAGGCAGTTCTGATGGGACAATTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420940.6
CDS-3UTR CAA 90 bp GCACATGTTCTTGGATCCCATACCCGTAACACCTTTTCAGTGGACCCTGATACATTTACCCTTTTGGCATaGCAGACTGTCGAATTTTCT +
Preference number: 5 (lower is better)
Translates to: AHVLGSHTRNTFSVDPDTFTLLA*QTVEFS
Trigger: AGAAAATTCGACAGTCTGCAATGCCAAAAGGGTAAA...TGTATCAGGGTCCACTGAAAAGGTGTTACGGGTATGGGATCCAAGAACATGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000420940.6
CDS-3UTR CAA 90 bp AATATTTGTCTGTCCAACCCAGCTGATGCTACTAGTTCTTTATCCTTGGCATATTCCAGCTGCAGAGCATaGACTCCATTTCGGTTGTAC +
Preference number: 5 (lower is better)
Translates to: NICLSNPADATSSLSLAYSSCRA*TPFRLY
Trigger: GTACAACCGAAATGGAGTCAATGCTCTGCAGCTGGA...ATATGCCAAGGATAAAGAACTAGTAGCATCAGCTGGGTTGGACAGACAAATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000433841.6
CDS-3UTR CAA 90 bp TTGAATTTGGGCATATTTTTATCCACAGTGATGTCAATTACCCATTGTGGCACTGAAGGCATCATTGACTaGCAGCGCCCAAACACCTTC +
Preference number: 5 (lower is better)
Translates to: LNLGIFLSTVMSITHCGTEGIID*QRPNTF
Trigger: GAAGGTGTTTGGGCGCTGCAAGTCAATGATGCCTTC...AGTGCCACAATGGGTAATTGACATCACTGTGGATAAAAATATGCCCAAATTCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
CDS-3UTR CAA 90 bp TGTCTGTCCAACCCAGCTGATGCTACTAGTTCTTTATCCTTGGCATATGCTAAGCTATCAAGCTCCATCTaGAGAACTGGTGCTTTTTCT +
Preference number: 5 (lower is better)
Translates to: CLSNPADATSSLSLAYAKLSSSI*RTGAFS
Trigger: AGAAAAAGCACCAGTTCTCAAGATGGAGCTTGATAG...CTTAGCATATGCCAAGGATAAAGAACTAGTAGCATCAGCTGGGTTGGACAGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413099.6
CDS-3UTR CAA 90 bp AGGCTTAGCACACAGGGCAAAATGACCCAGCAAAACCCATTTCTTTGCTCAAAGAATAACCTGGTCAGGTaGTGTACAAAGAGGTGTTAT +
Preference number: 5 (lower is better)
Translates to: RLSTQGKMTQQNPFLCSKNNLVR*CTKRCY
Trigger: ATAACACCTCTTTGTACACAACCTGACCAGGTTATT...CTTTGAGCAAAGAAATGGGTTTTGCTGGGTCATTTTGCCCTGTGTGCTAAGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR CAA 90 bp TCCAGCTTCACCAAAGATCACGGGTGTATGTGGGGGCACTTGAAAATATCCATTGATGTCAATTACCCATaGTGGCACTGTTTCATTAAG +
Preference number: 5 (lower is better)
Translates to: SSFTKDHGCMWGHLKISIDVNYP*WHCFIK
Trigger: CTTAATGAAACAGTGCCACAATGGGTAATTGACATC...AATGGATATTTTCAAGTGCCCCCACATACACCCGTGATCTTTGGTGAAGCTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
CDS-3UTR CAA 90 bp GGACAGCTTAATCTACACATGGAGACTGGTTTCTATATTACATCTCGATTAGTCGTCTGCACTGGCCTGTaGTCAGTCTTCTGTACATCT +
Preference number: 5 (lower is better)
Translates to: GQLNLHMETGFYITSRLVVCTGL*SVFCTS
Trigger: AGATGTACAGAAGACTGACAACAGGCCAGTGCAGAC...GACTAATCGAGATGTAATATAGAAACCAGTCTCCATGTGTAGATTAAGCTGTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302313.10
ENST00000413099.6
ENST00000420940.6
CDS-3UTR CAA 90 bp TGTCTGTCCAACCCAGCTGATGCTACTAGTTCTTTATCCTTGGCATATGCTAAGACTAGTTCTTTATCCTaGGCATATGCTAAGGCCTTT +
Preference number: 5 (lower is better)
Translates to: CLSNPADATSSLSLAYAKTSSLS*AYAKAF
Trigger: AAAGGCCTTAGCATATGCCAAGGATAAAGAACTAGT...CTTAGCATATGCCAAGGATAAAGAACTAGTAGCATCAGCTGGGTTGGACAGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000433841.6
CDS-3UTR CAA 90 bp TTTTTCATAAACATGTTCCATAACTTTTCGGACTTGGAGCATGTCACTAGCAGATTGTTGCAACCCAAATaGCAGGAGGAGGATCAGCTG +
Preference number: 5 (lower is better)
Translates to: FFINMFHNFSDLEHVTSRLLQPK*QEEDQL
Trigger: CAGCTGATCCTCCTCCTGCAATTTGGGTTGCAACAA...TCTGCTAGTGACATGCTCCAAGTCCGAAAAGTTATGGAACATGTTTATGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
CDS-3UTR CAA 90 bp GGAACCCTGTCTCTGCAGTTGTGCGATCAGAGTATCTTAAATAGTAAGGTATGGAATAACCTGGTCAGGTaGTGTACAAAGAGGTGTTAT +
Preference number: 5 (lower is better)
Translates to: GTLSLQLCDQSILNSKVWNNLVR*CTKRCY
Trigger: ATAACACCTCTTTGTACACAACCTGACCAGGTTATT...CCATACCTTACTATTTAAGATACTCTGATCGCACAACTGCAGAGACAGGGTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR CAA 90 bp ATAAACATGTTCCATAACTTTTCGGACTTGGAGCATGTCACTAGCAGAGAGTCTTTCGAAGGTCCATATTaGGATCCAAAACCTGGTCCT +
Preference number: 5 (lower is better)
Translates to: INMFHNFSDLEHVTSRESFEGPY*DPKPGP
Trigger: AGGACCAGGTTTTGGATCCAAATATGGACCTTCGAA...AGACTCTCTGCTAGTGACATGCTCCAAGTCCGAAAAGTTATGGAACATGTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
CDS-3UTR CAA 90 bp GCTTTTTCTTCACAAATTAGCACCCGAATGTCAGGGTTTCTTAGGTCTGTACAACTTCATACAGGAGGCTaGTCTTACAGTTTTATGGGG +
Preference number: 5 (lower is better)
Translates to: AFSSQISTRMSGFLRSVQLHTGG*SYSFMG
Trigger: CCCCATAAAACTGTAAGACAAGCCTCCTGTATGAAG...TTGTACAGACCTAAGAAACCCTGACATTCGGGTGCTAATTTGTGAAGAAAAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420940.6
CDS-3UTR CAA 90 bp TCTCTGTTTAATAGCAATGCCTTCACATTATCCGTGTGCCCTTTAAGCTTCATTACCCTGTCTCTGCAGTaGTGCGATCAGAGTATCTTA +
Preference number: 5 (lower is better)
Translates to: SLFNSNAFTLSVCPLSFITLSLQ*CDQSIL
Trigger: TAAGATACTCTGATCGCACAACTGCAGAGACAGGGT...AATGAAGCTTAAAGGGCACACGGATAATGTGAAGGCATTGCTATTAAACAGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420940.6
CDS-3UTR CAA 90 bp TCAATGCTGTTAGAGTATTCACATCCCAAAGGAATATTTGTCTGTCCAACCCAGTTGACTCCATTTCGGTaGTACTTCTCCACTTCATCT +
Preference number: 5 (lower is better)
Translates to: SMLLEYSHPKGIFVCPTQLTPFR*YFSTSS
Trigger: AGATGAAGTGGAGAAGTACAACCGAAATGGAGTCAA...CTGGGTTGGACAGACAAATATTCCTTTGGGATGTGAATACTCTAACAGCATTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000413099.6
ENST00000423296.6
ENST00000433841.6
CDS-3UTR CAA 90 bp CAGTCAATGCTGTTAGAGTATTCACATCCCAAAGGAATATTTGTCTGTCCAACCTTGACTCCATTTCGGTaGTACTTCTCCACTTCATCT +
Preference number: 5 (lower is better)
Translates to: QSMLLEYSHPKGIFVCPTLTPFR*YFSTSS
Trigger: AGATGAAGTGGAGAAGTACAACCGAAATGGAGTCAA...GGTTGGACAGACAAATATTCCTTTGGGATGTGAATACTCTAACAGCATTGACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000413099.6
ENST00000423296.6
ENST00000433841.6
CDS-3UTR CAA 90 bp TGTCTGTCCAACCCAGCTGATGCTACTAGTTCTTTATCCTTGGCATATGCTAAGTATGTGTCCTTAATGTaGACATGCAAAATCCCTTGT +
Preference number: 5 (lower is better)
Translates to: CLSNPADATSSLSLAYAKYVSLM*TCKIPC
Trigger: ACAAGGGATTTTGCATGTCAACATTAAGGACACATA...CTTAGCATATGCCAAGGATAAAGAACTAGTAGCATCAGCTGGGTTGGACAGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000433841.6
CDS-3UTR CAA 90 bp CGAATTTTCTGGAAACTGTATTACGGTTTGACTGGAGGGGAAAGAAATACAATCGTTTTGCACATGTTCTaGGATCCCATACCCGTAACA +
Preference number: 5 (lower is better)
Translates to: RIFWKLYYGLTGGERNTIVLHMF*DPIPVT
Trigger: TGTTACGGGTATGGGATCCAAGAACATGTGCAAAAC...GATTGTATTTCTTTCCCCTCCAGTCAAACCGTAATACAGTTTCCAGAAAATTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR CAA 90 bp TCTCTGTTTAATAGCAATGCCTTCACATTATCCGTGTGCCCTTTAAGCTTCATTGTTTTGCACATGTTCTaGGATCCCATACCCGTAACA +
Preference number: 5 (lower is better)
Translates to: SLFNSNAFTLSVCPLSFIVLHMF*DPIPVT
Trigger: TGTTACGGGTATGGGATCCAAGAACATGTGCAAAAC...AATGAAGCTTAAAGGGCACACGGATAATGTGAAGGCATTGCTATTAAACAGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
CDS-3UTR CAA 90 bp AAAGAAGCTGGTTGCTCTCTGAGGAAGGGAGAAAGACCATTTCAACTTATTAGATGTATGTGGGGGCACTaGAAAATATCCATTTCCCTT +
Preference number: 5 (lower is better)
Translates to: KEAGCSLRKGERPFQLIRCMWGH*KISISL
Trigger: AAGGGAAATGGATATTTTCAAGTGCCCCCACATACA...TCTAATAAGTTGAAATGGTCTTTCTCCCTTCCTCAGAGAGCAACCAGCTTCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR CAA 90 bp GATCTTCCTACAAGAACACATCTGAGATGCAATATTAACAACAAGCCCAACATTACCCTGTCTCTGCAGTaGTGCGATCAGAGTATCTTA +
Preference number: 5 (lower is better)
Translates to: DLPTRTHLRCNINNKPNITLSLQ*CDQSIL
Trigger: TAAGATACTCTGATCGCACAACTGCAGAGACAGGGT...AATGTTGGGCTTGTTGTTAATATTGCATCTCAGATGTGTTCTTGTAGGAAGATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR CAA 90 bp GGTGCTTTTTCTTCACAAATTAGCACCCGAATGTCAGGGTTTCTTAGGTCTGTAAAACTGTATTACGGTTaGACTGGAGGGGAAAGAAAT +
Preference number: 5 (lower is better)
Translates to: GAFSSQISTRMSGFLRSVKLYYG*TGGERN
Trigger: ATTTCTTTCCCCTCCAGTCAAACCGTAATACAGTTT...TACAGACCTAAGAAACCCTGACATTCGGGTGCTAATTTGTGAAGAAAAAGCACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000420940.6
CDS CCA 90 bp ATATTTGTCTGTCCAACCCAGCTGATGCTACTAGTTCTTTATCCTTaGCATATGCTAAGGCCTTTACGTAATCCTGTAATAGAACAGACA +
Preference number: 5 (lower is better)
Translates to: IFVCPTQLMLLVLYP*HMLRPLRNPVIEQT
Trigger: TGTCTGTTCTATTACAGGATTACGTAAAGGCCTTAGCATATGCCAAGGATAAAGAACTAGTAGCATCAGCTGGGTTGGACAGACAAATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423296.6
CDS-3UTR CAA 90 bp AGGCTTGTCTTACAGTTTTATGGGGGTGGACCACTGATTTACTCTGAATACAAAGACATGCAAAATCCCTaGTGTGCATTCCATACTTTT +
Preference number: 5 (lower is better)
Translates to: RLVLQFYGGGPLIYSEYKDMQNP*CAFHTF
Trigger: AAAAGTATGGAATGCACACAAGGGATTTTGCATGTC...TTTGTATTCAGAGTAAATCAGTGGTCCACCCCCATAAAACTGTAAGACAAGCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR CAA 90 bp GCAGTCAATGCTGTTAGAGTATTCACATCCCAAAGGAATATTTGTCTGTCCAACGACATGCAAAATCCCTaGTGTGCATTCCATACTTTT +
Preference number: 5 (lower is better)
Translates to: AVNAVRVFTSQRNICLSNDMQNP*CAFHTF
Trigger: AAAAGTATGGAATGCACACAAGGGATTTTGCATGTC...GTTGGACAGACAAATATTCCTTTGGGATGTGAATACTCTAACAGCATTGACTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000413099.6
ENST00000423296.6
ENST00000433841.6
CDS-3UTR CAA 90 bp CAGTCAATGCTGTTAGAGTATTCACATCCCAAAGGAATATTTGTCTGTCCAACCACTAGTTCTTTATCCTaGGCATATGCTAAGGCCTTT +
Preference number: 5 (lower is better)
Translates to: QSMLLEYSHPKGIFVCPTTSSLS*AYAKAF
Trigger: AAAGGCCTTAGCATATGCCAAGGATAAAGAACTAGT...GGTTGGACAGACAAATATTCCTTTGGGATGTGAATACTCTAACAGCATTGACTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000413099.6
ENST00000423296.6
ENST00000433841.6
CDS-3UTR CAA 90 bp AATATTTGTCTGTCCAACCCAGCTGATGCTACTAGTTCTTTATCCTTGGCATATAATGATTGTTCCCAGTaGATTCATGGCCAGGCTATA +
Preference number: 5 (lower is better)
Translates to: NICLSNPADATSSLSLAYNDCSQ*IHGQAI
Trigger: TATAGCCTGGCCATGAATCAACTGGGAACAATCATT...ATATGCCAAGGATAAAGAACTAGTAGCATCAGCTGGGTTGGACAGACAAATATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000433841.6
CDS-3UTR CAA 90 bp AATATTTGTCTGTCCAACCCAGCTGATGCTACTAGTTCTTTATCCTTGGCATATTGTATGTGGGGGCACTaGAAAATATCCATTTCCCTT +
Preference number: 5 (lower is better)
Translates to: NICLSNPADATSSLSLAYCMWGH*KISISL
Trigger: AAGGGAAATGGATATTTTCAAGTGCCCCCACATACA...ATATGCCAAGGATAAAGAACTAGTAGCATCAGCTGGGTTGGACAGACAAATATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413099.6
CDS-3UTR CAA 90 bp TCAATGCTGTTAGAGTATTCACATCCCAAAGGAATATTTGTCTGTCCAACCCAGAGAAGAGCTAGTGGTTaGAGACTCATTATCCAAGTT +
Preference number: 5 (lower is better)
Translates to: SMLLEYSHPKGIFVCPTQRRASG*RLIIQV
Trigger: AACTTGGATAATGAGTCTCAAACCACTAGCTCTTCT...CTGGGTTGGACAGACAAATATTCCTTTGGGATGTGAATACTCTAACAGCATTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413099.6
CDS-3UTR CAA 90 bp GGACAGCTTAATCTACACATGGAGACTGGTTTCTATATTACATCTCGATTAGTCCAGATTTTTACCCTTTaGGCATTGCAGACTGTCGAA +
Preference number: 5 (lower is better)
Translates to: GQLNLHMETGFYITSRLVQIFTL*ALQTVE
Trigger: TTCGACAGTCTGCAATGCCAAAAGGGTAAAAATCTG...GACTAATCGAGATGTAATATAGAAACCAGTCTCCATGTGTAGATTAAGCTGTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR CAA 90 bp CCATTACAACAGAGTACAATGTCGTTTACCCAATCAGTATGGTGTTCCATAGATGACATGCAAAATCCCTaGTGTGCATTCCATACTTTT +
Preference number: 5 (lower is better)
Translates to: PLQQSTMSFTQSVWCSIDDMQNP*CAFHTF
Trigger: AAAAGTATGGAATGCACACAAGGGATTTTGCATGTC...ATCTATGGAACACCATACTGATTGGGTAAACGACATTGTACTCTGTTGTAATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433841.6
CDS-3UTR CAA 90 bp GCAGTCAATGCTGTTAGAGTATTCACATCCCAAAGGAATATTTGTCTGTCCAACTATGTGTCCTTAATGTaGACATGCAAAATCCCTTGT +
Preference number: 5 (lower is better)
Translates to: AVNAVRVFTSQRNICLSNYVSLM*TCKIPC
Trigger: ACAAGGGATTTTGCATGTCAACATTAAGGACACATA...GTTGGACAGACAAATATTCCTTTGGGATGTGAATACTCTAACAGCATTGACTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000413099.6
ENST00000423296.6
ENST00000433841.6
CDS-3UTR CAA 90 bp GGACAGCTTAATCTACACATGGAGACTGGTTTCTATATTACATCTCGATTAGTCAGAAGAGCTAGTGGTTaGAGACTCATTATCCAAGTT +
Preference number: 5 (lower is better)
Translates to: GQLNLHMETGFYITSRLVRRASG*RLIIQV
Trigger: AACTTGGATAATGAGTCTCAAACCACTAGCTCTTCT...GACTAATCGAGATGTAATATAGAAACCAGTCTCCATGTGTAGATTAAGCTGTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302313.10
ENST00000413099.6
ENST00000420940.6
CDS-3UTR CAA 90 bp CGAATTTTCTGGAAACTGTATTACGGTTTGACTGGAGGGGAAAGAAATACAATCAGAAGAGCTAGTGGTTaGAGACTCATTATCCAAGTT +
Preference number: 5 (lower is better)
Translates to: RIFWKLYYGLTGGERNTIRRASG*RLIIQV
Trigger: AACTTGGATAATGAGTCTCAAACCACTAGCTCTTCT...GATTGTATTTCTTTCCCCTCCAGTCAAACCGTAATACAGTTTCCAGAAAATTCG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS-3UTR CAA 90 bp GGACAGCTTAATCTACACATGGAGACTGGTTTCTATATTACATCTCGATTAGTCAAACTGTATTACGGTTaGACTGGAGGGGAAAGAAAT +
Preference number: 5 (lower is better)
Translates to: GQLNLHMETGFYITSRLVKLYYG*TGGERN
Trigger: ATTTCTTTCCCCTCCAGTCAAACCGTAATACAGTTT...GACTAATCGAGATGTAATATAGAAACCAGTCTCCATGTGTAGATTAAGCTGTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000420940.6
CDS GCA 90 bp TTGTTTCCACTTAAAGAAGAAGCTTATGTGTCCTTAATGTTGACATaGAAAATCCCTTGTGTGCATTCCATACTTTTACTGTCGTGTCAG +
Preference number: 5 (lower is better)
Translates to: LFPLKEEAYVSLMLT*KIPCVHSILLLSCQ
Trigger: CTGACACGACAGTAAAAGTATGGAATGCACACAAGGGATTTTGCATGTCAACATTAAGGACACATAAGCTTCTTCTTTAAGTGGAAACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420940.6
CDS-3UTR CAA 90 bp ATCTTTTGCAGAAACCCAGGCAGCAAAACAATCACTTTCATCCAAAGTAATAGTGACATGCAAAATCCCTaGTGTGCATTCCATACTTTT +
Preference number: 5 (lower is better)
Translates to: IFCRNPGSKTITFIQSNSDMQNP*CAFHTF
Trigger: AAAAGTATGGAATGCACACAAGGGATTTTGCATGTC...ACTATTACTTTGGATGAAAGTGATTGTTTTGCTGCCTGGGTTTCTGCAAAAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
CDS-3UTR CAA 90 bp GGACAGCTTAATCTACACATGGAGACTGGTTTCTATATTACATCTCGATTAGTCTATGTGTCCTTAATGTaGACATGCAAAATCCCTTGT +
Preference number: 5 (lower is better)
Translates to: GQLNLHMETGFYITSRLVYVSLM*TCKIPC
Trigger: ACAAGGGATTTTGCATGTCAACATTAAGGACACATA...GACTAATCGAGATGTAATATAGAAACCAGTCTCCATGTGTAGATTAAGCTGTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302313.10
ENST00000413099.6
ENST00000420940.6
CDS-3UTR CAA 90 bp CTACACATGGAGACTGGTTTCTATATTACATCTCGATTAGTCACTTCAATTGAACTATCAAGCTCCATCTaGAGAACTGGTGCTTTTTCT +
Preference number: 5 (lower is better)
Translates to: LHMETGFYITSRLVTSIELSSSI*RTGAFS
Trigger: AGAAAAAGCACCAGTTCTCAAGATGGAGCTTGATAG...TTCAATTGAAGTGACTAATCGAGATGTAATATAGAAACCAGTCTCCATGTGTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302313.10
ENST00000413099.6
ENST00000420940.6
CDS-3UTR CAA 90 bp TTTTTCATAAACATGTTCCATAACTTTTCGGACTTGGAGCATGTCACTAGCAGATATGTGTCCTTAATGTaGACATGCAAAATCCCTTGT +
Preference number: 5 (lower is better)
Translates to: FFINMFHNFSDLEHVTSRYVSLM*TCKIPC
Trigger: ACAAGGGATTTTGCATGTCAACATTAAGGACACATA...TCTGCTAGTGACATGCTCCAAGTCCGAAAAGTTATGGAACATGTTTATGAAAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000413099.6
ENST00000420940.6
CDS-3UTR CAA 90 bp CTACACATGGAGACTGGTTTCTATATTACATCTCGATTAGTCACTTCAATTGAAACTAGTTCTTTATCCTaGGCATATGCTAAGGCCTTT +
Preference number: 5 (lower is better)
Translates to: LHMETGFYITSRLVTSIETSSLS*AYAKAF
Trigger: AAAGGCCTTAGCATATGCCAAGGATAAAGAACTAGT...TTCAATTGAAGTGACTAATCGAGATGTAATATAGAAACCAGTCTCCATGTGTAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302313.10
ENST00000413099.6
CDS GCA 72 bp CAGCTCCCACATAAGAGAGGGCTGGGGGCTCCCAAGTaGGGAATCCTCAGCAGAAACCCCGCAGGGCCGTTG +
Preference number: 6 (lower is better)
Translates to: QLPHKRGLGAPK*GILSRNPAGPL
Trigger: CAACGGCCCTGCGGGGTTTCTGCTGAGGATTCCGCACTTGGGAGCCCCCAGCCCTCTCTTATGTGGGAGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441361.1
CDS CCA 72 bp GGAAACCCAGGGGACAGCTCCCACATAAGAGAGGGCTaGGGGCTCCCAAGTGCGGAATCCTCAGCAGAAACC +
Preference number: 6 (lower is better)
Translates to: GNPGDSSHIREG*GLPSAESSAET
Trigger: GGTTTCTGCTGAGGATTCCGCACTTGGGAGCCCCCAGCCCTCTCTTATGTGGGAGCTGTCCCCTGGGTTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441361.1
CDS GCA 72 bp TCGAATAACATAGGAAACCTGCACTTTCCTCCGCCCTaGTGTGTTCTGCCGGTGATGGGCCGCCATCTTGCA +
Preference number: 6 (lower is better)
Translates to: SNNIGNLHFPPP*CVLPVMGRHLA
Trigger: TGCAAGATGGCGGCCCATCACCGGCAGAACACAGCAGGGCGGAGGAAAGTGCAGGTTTCCTATGTTATTCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302313.10
ENST00000413099.6
ENST00000420940.6
ENST00000423296.6
ENST00000433841.6
CDS CCA 72 bp TCAGGTGATCCAGCTTGCTCACTCCTCCCCTATGCCTaGTATCCAATTCTTGCTGTCACGGCTTCCATGCAT +
Preference number: 6 (lower is better)
Translates to: SGDPACSLLPYA*YPILAVTASMH
Trigger: ATGCATGGAAGCCGTGACAGCAAGAATTGGATACCAGGCATAGGGGAGGAGTGAGCAAGCTGGATCACCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466405.1
CDS CAA 72 bp CTTAAGTGTCTTGAGAGAAACCCACAGCATTCACCTTaGAGCAAAGCCACACATTCTGTGCTGGTGAGGCCC +
Preference number: 6 (lower is better)
Translates to: LKCLERNPQHSP*SKATHSVLVRP
Trigger: GGGCCTCACCAGCACAGAATGTGTGGCTTTGCTCAAAGGTGAATGCTGTGGGTTTCTCTCAAGACACTTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466405.1
CDS CCA 72 bp CATGTAACTCTTTATGAGCACCAGCACTGGAAAAATTaGGGCTGTAGTCCTCAAGTCCACTTACCTGGTCCT +
Preference number: 6 (lower is better)
Translates to: HVTLYEHQHWKN*GCSPQVHLPGP
Trigger: AGGACCAGGTAAGTGGACTTGAGGACTACAGCCCCAATTTTTCCAGTGCTGGTGCTCATAAAGAGTTACATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466405.1
CDS CCA 72 bp CAGCAGAGAATCTTCAGCAGAGTAAGCCTCAGTCGATaGGACTCAATGATTCCTCAACCAGCATGGTTTACT +
Preference number: 6 (lower is better)
Translates to: QQRIFSRVSLSR*DSMIPQPAWFT
Trigger: AGTAAACCATGCTGGTTGAGGAATCATTGAGTCCCATCGACTGAGGCTTACTCTGCTGAAGATTCTCTGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463198.1
CDS GCA 72 bp CTGGTATCCAATTCTTGCTGTCACGGCTTCCATGCATaGGGGAATGAAATTGAGCTTAGTGAGATGTACATC +
Preference number: 6 (lower is better)
Translates to: LVSNSCCHGFHA*GNEIELSEMYI
Trigger: GATGTACATCTCACTAAGCTCAATTTCATTCCCGCATGCATGGAAGCCGTGACAGCAAGAATTGGATACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466405.1
CDS CCA 72 bp ACCCAAAGGCATGTAACTCTTTATGAGCACCAGCACTaGAAAAATTGGGGCTGTAGTCCTCAAGTCCACTTA +
Preference number: 6 (lower is better)
Translates to: TQRHVTLYEHQH*KNWGCSPQVHL
Trigger: TAAGTGGACTTGAGGACTACAGCCCCAATTTTTCCAGTGCTGGTGCTCATAAAGAGTTACATGCCTTTGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466405.1
CDS CAA 90 bp AAACAAAAACTTAAGTGTCTTGAGAGAAACCCACAGCATTCACCTTaGAGCAAAGCCACACATTCTGTGCTGGTGAGGCCCATCATCCAA +
Preference number: 6 (lower is better)
Translates to: KQKLKCLERNPQHSP*SKATHSVLVRPIIQ
Trigger: TTGGATGATGGGCCTCACCAGCACAGAATGTGTGGCTTTGCTCAAAGGTGAATGCTGTGGGTTTCTCTCAAGACACTTAAGTTTTTGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466405.1
CDS CAA 72 bp CTTGCTGTCACGGCTTCCATGCATGCGGGAATGAAATaGAGCTTAGTGAGATGTACATCTTTTGTGACTATG +
Preference number: 6 (lower is better)
Translates to: LAVTASMHAGMK*SLVRCTSFVTM
Trigger: CATAGTCACAAAAGATGTACATCTCACTAAGCTCAATTTCATTCCCGCATGCATGGAAGCCGTGACAGCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466405.1
CDS CAA 90 bp TATCCAATTCTTGCTGTCACGGCTTCCATGCATGCGGGAATGAAATaGAGCTTAGTGAGATGTACATCTTTTGTGACTATGCCAGAAACA +
Preference number: 6 (lower is better)
Translates to: YPILAVTASMHAGMK*SLVRCTSFVTMPET
Trigger: TGTTTCTGGCATAGTCACAAAAGATGTACATCTCACTAAGCTCAATTTCATTCCCGCATGCATGGAAGCCGTGACAGCAAGAATTGGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466405.1
CDS CCA 72 bp TGTCCAACCCAGCTGATGCTACTAGTTCTTTATCCTTaGCATATGCTAAGGCCTTTACGTAATCCTGTAATA +
Preference number: 6 (lower is better)
Translates to: CPTQLMLLVLYP*HMLRPLRNPVI
Trigger: TATTACAGGATTACGTAAAGGCCTTAGCATATGCCAAGGATAAAGAACTAGTAGCATCAGCTGGGTTGGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423296.6
CDS CAA 90 bp TGCTCAGGCATAGAGAAGACCATGGAATATCCATCAGGTGTCACATaGGCTTTAAGTCTTAGAGGTATATCCGGGACAGAAAATAAAGTT +
Preference number: 6 (lower is better)
Translates to: CSGIEKTMEYPSGVT*ALSLRGISGTENKV
Trigger: AACTTTATTTTCTGTCCCGGATATACCTCTAAGACTTAAAGCCAATGTGACACCTGATGGATATTCCATGGTCTTCTCTATGCCTGAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466405.1
CDS TCA 72 bp CCAGATGTCTACCATGAAGTAAACCACATTCTTAGATaGAGGATAAAATTACGTGGTCATCTTTTCTCAGGG +
Preference number: 6 (lower is better)
Translates to: PDVYHEVNHILR*RIKLRGHLFSG
Trigger: CCCTGAGAAAAGATGACCACGTAATTTTATCCTTCATCTAAGAATGTGGTTTACTTCATGGTAGACATCTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466405.1
CDS GCA 72 bp AATGTCGTTTACCCAATCAGTATGGTGTTCCATAGATaGTATATATGGATCTTGCTTGTGCTGATTGACACT +
Preference number: 6 (lower is better)
Translates to: NVVYPISMVFHR*YIWILLVLIDT
Trigger: AGTGTCAATCAGCACAAGCAAGATCCATATATAGCATCTATGGAACACCATACTGATTGGGTAAACGACATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302313.10
ENST00000420940.6
ENST00000423296.6
ENST00000441361.1
CDS GCA 72 bp CCGCACACCTTCACTCTAAATCATAAACATGGCACATaGTTTTTGCAAATCAAGAAGACCATGTGTCTTTTT +
Preference number: 6 (lower is better)
Translates to: PHTFTLNHKHGT*FLQIKKTMCLF
Trigger: AAAAAGACACATGGTCTTCTTGATTTGCAAAAAGCATGTGCCATGTTTATGATTTAGAGTGAAGGTGTGCGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466405.1
CDS GCA 72 bp CTTAAAGAAGAAGCTTATGTGTCCTTAATGTTGACATaGAAAATCCCTTGTGTGCATTCCATACTTTTACTG +
Preference number: 6 (lower is better)
Translates to: LKEEAYVSLMLT*KIPCVHSILLL
Trigger: CAGTAAAAGTATGGAATGCACACAAGGGATTTTGCATGTCAACATTAAGGACACATAAGCTTCTTCTTTAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420940.6
CDS CAA 72 bp TTTCCACTTAAAGAAGAAGCTTATGTGTCCTTAATGTaGACATGCAAAATCCCTTGTGTGCATTCCATACTT +
Preference number: 6 (lower is better)
Translates to: FPLKEEAYVSLM*TCKIPCVHSIL
Trigger: AAGTATGGAATGCACACAAGGGATTTTGCATGTCAACATTAAGGACACATAAGCTTCTTCTTTAAGTGGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420940.6