RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for WDR44 (Homo sapiens)

Ensembl gene IDs: ENSG00000131725

Ensembl transcript IDs: ENST00000254029.8, ENST00000371822.9, ENST00000371825.7, ENST00000371848.3, ENST00000493448.1

Found 273 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR GCA 90 bp CTAACCATCAACAACATGATCAGGGTTTCATTGCCCCAGATGTTATTTCATTGGGTGAGCAAAGCCTGGTaGTCATGGATAAAGAATGAA +
Preference number: 2 (lower is better)
Translates to: LTINNMIRVSLPQMLFHWVSKAW*SWIKNE
Trigger: TTCATTCTTTATCCATGAGCACCAGGCTTTGCTCAC...CCAATGAAATAACATCTGGGGCAATGAAACCCTGATCATGTTGTTGATGGTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
3UTR-3UTR GCA 90 bp CATATTCCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTAACAAACACTTTGATTaGTCCAGTGAAGTCAGCAGA +
Preference number: 2 (lower is better)
Translates to: HIPFYSISPGFPRSLTLPNKHFD*SSEVSR
Trigger: TCTGCTGACTTCACTGGAGCAATCAAAGTGTTTGTT...AGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGGAATATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371848.3
3UTR-3UTR TCA 90 bp CTAACCATCAACAACATGATCAGGGTTTCATTGCCCCAGATGTTATTTCATTGGGGCCAAAAGAGCCACTaGAATAATTTAACTCTGTTA +
Preference number: 2 (lower is better)
Translates to: LTINNMIRVSLPQMLFHWGQKSH*NNLTLL
Trigger: TAACAGAGTTAAATTATTTCAGTGGCTCTTTTGGCC...CCAATGAAATAACATCTGGGGCAATGAAACCCTGATCATGTTGTTGATGGTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
3UTR-3UTR GCA 90 bp CTAACCATCAACAACATGATCAGGGTTTCATTGCCCCAGATGTTATTTCATTGGTACATAGAAACATTGTaGTCCAGTGTGGCAAAGAAA +
Preference number: 2 (lower is better)
Translates to: LTINNMIRVSLPQMLFHWYIETL*SSVAKK
Trigger: TTTCTTTGCCACACTGGAGCACAATGTTTCTATGTA...CCAATGAAATAACATCTGGGGCAATGAAACCCTGATCATGTTGTTGATGGTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
3UTR-3UTR CCA 90 bp CTAACCATCAACAACATGATCAGGGTTTCATTGCCCCAGATGTTATTTCATTGGTGGTTGTTGACCTACTaGAAACCTATATACCATTTT +
Preference number: 2 (lower is better)
Translates to: LTINNMIRVSLPQMLFHWWLLTY*KPIYHF
Trigger: AAAATGGTATATAGGTTTCCAGTAGGTCAACAACCA...CCAATGAAATAACATCTGGGGCAATGAAACCCTGATCATGTTGTTGATGGTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
3UTR-3UTR CAA 90 bp CTAACCATCAACAACATGATCAGGGTTTCATTGCCCCAGATGTTATTTCATTGGCTTTACATAGAAACATaGTGCTCCAGTGTGGCAAAG +
Preference number: 3 (lower is better)
Translates to: LTINNMIRVSLPQMLFHWLYIET*CSSVAK
Trigger: CTTTGCCACACTGGAGCACAATGTTTCTATGTAAAG...CCAATGAAATAACATCTGGGGCAATGAAACCCTGATCATGTTGTTGATGGTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
CDS-3UTR TCA 90 bp CCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTCTCAAAGGCAAAGCGGCCGCCTaGAGAGGCGGCGGTTGGTCC +
Preference number: 4 (lower is better)
Translates to: PFYSISPGFPRSLTLPLKGKAAA*RGGGWS
Trigger: GGACCAACCGCCGCCTCTTCAGGCGGCCGCTTTGCC...TTTGAGAGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
CDS-3UTR TCA 90 bp CCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTCTCAAAGCCGGGCTTCGGGAATaGCCGGCAAAGCGGCCGCCT +
Preference number: 4 (lower is better)
Translates to: PFYSISPGFPRSLTLPLKAGLRE*PAKRPP
Trigger: AGGCGGCCGCTTTGCCGGTCATTCCCGAAGCCCGGC...TTTGAGAGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
CDS-3UTR TCA 90 bp CATATTCCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTGGCAAAGCGGCCGCCTaGAGAGGCGGCGGTTGGTCC +
Preference number: 4 (lower is better)
Translates to: HIPFYSISPGFPRSLTLPGKAAA*RGGGWS
Trigger: GGACCAACCGCCGCCTCTTCAGGCGGCCGCTTTGCC...AGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGGAATATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
CDS-3UTR CCA 90 bp CCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTCTCAAAGGGGCCGGCGCCGCCTaGAGGAAGGGTGACTCTTGT +
Preference number: 4 (lower is better)
Translates to: PFYSISPGFPRSLTLPLKGAGAA*RKGDSC
Trigger: ACAAGAGTCACCCTTCCTCCAGGCGGCGCCGGCCCC...TTTGAGAGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
CDS-3UTR TCA 90 bp CTAACCATCAACAACATGATCAGGGTTTCATTGCCCCAGATGTTATTTCATTGGGGCAAAGCGGCCGCCTaGAGAGGCGGCGGTTGGTCC +
Preference number: 4 (lower is better)
Translates to: LTINNMIRVSLPQMLFHWGKAAA*RGGGWS
Trigger: GGACCAACCGCCGCCTCTTCAGGCGGCCGCTTTGCC...CCAATGAAATAACATCTGGGGCAATGAAACCCTGATCATGTTGTTGATGGTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
CDS-3UTR TCA 90 bp CTAACCATCAACAACATGATCAGGGTTTCATTGCCCCAGATGTTATTTCATTGGGCCGGGCTTCGGGAATaGCCGGCAAAGCGGCCGCCT +
Preference number: 4 (lower is better)
Translates to: LTINNMIRVSLPQMLFHWAGLRE*PAKRPP
Trigger: AGGCGGCCGCTTTGCCGGTCATTCCCGAAGCCCGGC...CCAATGAAATAACATCTGGGGCAATGAAACCCTGATCATGTTGTTGATGGTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
CDS-3UTR GCA 90 bp CATATTCCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTGGGGCCGCCCTCAGTTaGCGGGCTTCGGGAATGACC +
Preference number: 4 (lower is better)
Translates to: HIPFYSISPGFPRSLTLPGAALS*RASGMT
Trigger: GGTCATTCCCGAAGCCCGGCAACTGAGGGCGGCCCC...AGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGGAATATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
CDS-3UTR CCA 90 bp CCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTCTCAAAGCGAGACTGGGGAAGTaGGTCTCGGGCGAGGCTGAG +
Preference number: 4 (lower is better)
Translates to: PFYSISPGFPRSLTLPLKARLGK*VSGEAE
Trigger: CTCAGCCTCGCCCGAGACCCACTTCCCCAGTCTCGC...TTTGAGAGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
CDS-3UTR CCA 90 bp CTAACCATCAACAACATGATCAGGGTTTCATTGCCCCAGATGTTATTTCATTGGCCACCCGGGCGAGACTaGGGAAGTGGGTCTCGGGCG +
Preference number: 4 (lower is better)
Translates to: LTINNMIRVSLPQMLFHWPPGRD*GSGSRA
Trigger: CGCCCGAGACCCACTTCCCCAGTCTCGCCCGGGTGG...CCAATGAAATAACATCTGGGGCAATGAAACCCTGATCATGTTGTTGATGGTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
CDS-3UTR CCA 90 bp CATATTCCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTGGGGCCGGCGCCGCCTaGAGGAAGGGTGACTCTTGT +
Preference number: 4 (lower is better)
Translates to: HIPFYSISPGFPRSLTLPGAGAA*RKGDSC
Trigger: ACAAGAGTCACCCTTCCTCCAGGCGGCGCCGGCCCC...AGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGGAATATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
CDS-3UTR TCA 90 bp CCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTCTCAAAGGTCTCGGGCGAGGCTaGGGGAGCAGACGATCTGTA +
Preference number: 4 (lower is better)
Translates to: PFYSISPGFPRSLTLPLKGLGRG*GSRRSV
Trigger: TACAGATCGTCTGCTCCCTCAGCCTCGCCCGAGACC...TTTGAGAGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
CDS-3UTR GCA 90 bp CTAACCATCAACAACATGATCAGGGTTTCATTGCCCCAGATGTTATTTCATTGGGGGGCCGCCCTCAGTTaGCGGGCTTCGGGAATGACC +
Preference number: 4 (lower is better)
Translates to: LTINNMIRVSLPQMLFHWGAALS*RASGMT
Trigger: GGTCATTCCCGAAGCCCGGCAACTGAGGGCGGCCCC...CCAATGAAATAACATCTGGGGCAATGAAACCCTGATCATGTTGTTGATGGTTAG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
CDS-3UTR CCA 90 bp CATATTCCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTGCGAGACTGGGGAAGTaGGTCTCGGGCGAGGCTGAG +
Preference number: 4 (lower is better)
Translates to: HIPFYSISPGFPRSLTLPARLGK*VSGEAE
Trigger: CTCAGCCTCGCCCGAGACCCACTTCCCCAGTCTCGC...AGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGGAATATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
CDS-3UTR TCA 90 bp CATATTCCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTGGTCTCGGGCGAGGCTaGGGGAGCAGACGATCTGTA +
Preference number: 4 (lower is better)
Translates to: HIPFYSISPGFPRSLTLPGLGRG*GSRRSV
Trigger: TACAGATCGTCTGCTCCCTCAGCCTCGCCCGAGACC...AGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGGAATATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
CDS-3UTR CCA 90 bp CCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTCTCAAAGCGCGAAAGAGGCGGTaGCTCCTCGCAGTAAGGGAA +
Preference number: 4 (lower is better)
Translates to: PFYSISPGFPRSLTLPLKARKRR*LLAVRE
Trigger: TTCCCTTACTGCGAGGAGCCACCGCCTCTTTCGCGC...TTTGAGAGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
CDS-3UTR TCA 90 bp CTAACCATCAACAACATGATCAGGGTTTCATTGCCCCAGATGTTATTTCATTGGGGTCTCGGGCGAGGCTaGGGGAGCAGACGATCTGTA +
Preference number: 4 (lower is better)
Translates to: LTINNMIRVSLPQMLFHWGLGRG*GSRRSV
Trigger: TACAGATCGTCTGCTCCCTCAGCCTCGCCCGAGACC...CCAATGAAATAACATCTGGGGCAATGAAACCCTGATCATGTTGTTGATGGTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
CDS-3UTR CCA 90 bp CCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTCTCAAAGGTGTCTTGGGGGTTTaGCAGGGGCCACTTCTTCCA +
Preference number: 4 (lower is better)
Translates to: PFYSISPGFPRSLTLPLKGVLGV*QGPLLP
Trigger: TGGAAGAAGTGGCCCCTGCCAAACCCCCAAGACACC...TTTGAGAGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS-3UTR TCA 90 bp CCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTCTCAAAACTTTCCTGAGAGGGTaGTGGGGACACACGTCCTTC +
Preference number: 4 (lower is better)
Translates to: PFYSISPGFPRSLTLPLKTFLRG*WGHTSF
Trigger: GAAGGACGTGTGTCCCCATCACCCTCTCAGGAAAGT...TTTGAGAGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS-3UTR GCA 90 bp CCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTCTCAAAGCTGGAAGAGCTAGTTaGCCGCAAAATACCGACGCG +
Preference number: 4 (lower is better)
Translates to: PFYSISPGFPRSLTLPLKAGRAS*PQNTDA
Trigger: CGCGTCGGTATTTTGCGGGCAACTAGCTCTTCCAGC...TTTGAGAGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371822.9
CDS-3UTR CCA 90 bp CTAACCATCAACAACATGATCAGGGTTTCATTGCCCCAGATGTTATTTCATTGGGCGCGAAAGAGGCGGTaGCTCCTCGCAGTAAGGGAA +
Preference number: 4 (lower is better)
Translates to: LTINNMIRVSLPQMLFHWARKRR*LLAVRE
Trigger: TTCCCTTACTGCGAGGAGCCACCGCCTCTTTCGCGC...CCAATGAAATAACATCTGGGGCAATGAAACCCTGATCATGTTGTTGATGGTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
CDS-3UTR CCA 90 bp CATATTCCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTGGTGTCTTGGGGGTTTaGCAGGGGCCACTTCTTCCA +
Preference number: 4 (lower is better)
Translates to: HIPFYSISPGFPRSLTLPGVLGV*QGPLLP
Trigger: TGGAAGAAGTGGCCCCTGCCAAACCCCCAAGACACC...AGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGGAATATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS-3UTR CCA 90 bp CATATTCCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTTGGAGTAAGGTGTCTTaGGGGTTTGGCAGGGGCCAC +
Preference number: 4 (lower is better)
Translates to: HIPFYSISPGFPRSLTLPWSKVS*GFGRGH
Trigger: GTGGCCCCTGCCAAACCCCCAAGACACCTTACTCCA...AGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGGAATATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS-3UTR CCA 90 bp CCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTCTCAAAAGGTGGGAAATTAGTTaGAGGAGGTGGGCGTGCTGG +
Preference number: 4 (lower is better)
Translates to: PFYSISPGFPRSLTLPLKRWEIS*RRWACW
Trigger: CCAGCACGCCCACCTCCTCCAACTAATTTCCCACCT...TTTGAGAGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS-3UTR TCA 90 bp CCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTCTCAAATTGGATCTAGGTCTCTaGGGGCCCATCACTTCACCT +
Preference number: 4 (lower is better)
Translates to: PFYSISPGFPRSLTLPLKLDLGL*GPITSP
Trigger: AGGTGAAGTGATGGGCCCTCAGAGACCTAGATCCAA...TTTGAGAGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS-3UTR TCA 90 bp CATATTCCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTACTTTCCTGAGAGGGTaGTGGGGACACACGTCCTTC +
Preference number: 4 (lower is better)
Translates to: HIPFYSISPGFPRSLTLPTFLRG*WGHTSF
Trigger: GAAGGACGTGTGTCCCCATCACCCTCTCAGGAAAGT...AGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGGAATATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS-3UTR GCA 90 bp CATATTCCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTGCCCATCACTTCACCTaGTACAGTCTGCCCATCAGG +
Preference number: 4 (lower is better)
Translates to: HIPFYSISPGFPRSLTLPAHHFT*YSLPIR
Trigger: CCTGATGGGCAGACTGTAGCAGGTGAAGTGATGGGC...AGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGGAATATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS-3UTR CCA 90 bp CTAACCATCAACAACATGATCAGGGTTTCATTGCCCCAGATGTTATTTCATTGGTGGAGTAAGGTGTCTTaGGGGTTTGGCAGGGGCCAC +
Preference number: 4 (lower is better)
Translates to: LTINNMIRVSLPQMLFHWWSKVS*GFGRGH
Trigger: GTGGCCCCTGCCAAACCCCCAAGACACCTTACTCCA...CCAATGAAATAACATCTGGGGCAATGAAACCCTGATCATGTTGTTGATGGTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
CDS-3UTR CCA 90 bp CCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTCTCAAAAGGAGGTGGGCGTGCTaGAACAGGCTTCTTTGTACT +
Preference number: 4 (lower is better)
Translates to: PFYSISPGFPRSLTLPLKRRWAC*NRLLCT
Trigger: AGTACAAAGAAGCCTGTTCCAGCACGCCCACCTCCT...TTTGAGAGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS-3UTR CCA 90 bp CCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTCTCAAAATTAGTTGGAGGAGGTaGGCGTGCTGGAACAGGCTT +
Preference number: 4 (lower is better)
Translates to: PFYSISPGFPRSLTLPLKISWRR*ACWNRL
Trigger: AAGCCTGTTCCAGCACGCCCACCTCCTCCAACTAAT...TTTGAGAGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS-3UTR CCA 90 bp CATATTCCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTAGGTGGGAAATTAGTTaGAGGAGGTGGGCGTGCTGG +
Preference number: 4 (lower is better)
Translates to: HIPFYSISPGFPRSLTLPRWEIS*RRWACW
Trigger: CCAGCACGCCCACCTCCTCCAACTAATTTCCCACCT...AGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGGAATATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS-3UTR CCA 90 bp CCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTCTCAAATGGGGGTCTAGGAGGTaGGAAATTAGTTGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: PFYSISPGFPRSLTLPLKWGSRR*EISWRR
Trigger: CCTCCTCCAACTAATTTCCCACCTCCTAGACCCCCA...TTTGAGAGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS-3UTR TCA 90 bp CATATTCCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTTTGGATCTAGGTCTCTaGGGGCCCATCACTTCACCT +
Preference number: 4 (lower is better)
Translates to: HIPFYSISPGFPRSLTLPLDLGL*GPITSP
Trigger: AGGTGAAGTGATGGGCCCTCAGAGACCTAGATCCAA...AGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGGAATATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS-3UTR TCA 90 bp CTAACCATCAACAACATGATCAGGGTTTCATTGCCCCAGATGTTATTTCATTGGACTTTCCTGAGAGGGTaGTGGGGACACACGTCCTTC +
Preference number: 4 (lower is better)
Translates to: LTINNMIRVSLPQMLFHWTFLRG*WGHTSF
Trigger: GAAGGACGTGTGTCCCCATCACCCTCTCAGGAAAGT...CCAATGAAATAACATCTGGGGCAATGAAACCCTGATCATGTTGTTGATGGTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
CDS-3UTR GCA 90 bp CCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTCTCAAATCACCTGCTACAGTCTaGCCATCAGGTGCTTTTCCA +
Preference number: 4 (lower is better)
Translates to: PFYSISPGFPRSLTLPLKSPATV*PSGAFP
Trigger: TGGAAAAGCACCTGATGGGCAGACTGTAGCAGGTGA...TTTGAGAGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS-3UTR GCA 90 bp CTAACCATCAACAACATGATCAGGGTTTCATTGCCCCAGATGTTATTTCATTGGGCCCATCACTTCACCTaGTACAGTCTGCCCATCAGG +
Preference number: 4 (lower is better)
Translates to: LTINNMIRVSLPQMLFHWAHHFT*YSLPIR
Trigger: CCTGATGGGCAGACTGTAGCAGGTGAAGTGATGGGC...CCAATGAAATAACATCTGGGGCAATGAAACCCTGATCATGTTGTTGATGGTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
CDS-3UTR GCA 90 bp CCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTCTCAAACCGTTGCCGAAAGGGTaGGTTTTTATCATCAGGGTC +
Preference number: 4 (lower is better)
Translates to: PFYSISPGFPRSLTLPLKPLPKG*VFIIRV
Trigger: GACCCTGATGATAAAAACGCACCCTTTCGGCAACGG...TTTGAGAGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS-3UTR CCA 90 bp CCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTCTCAAACACTATATCAGGCTCTaGAGTAAGGTGTCTTGGGGG +
Preference number: 4 (lower is better)
Translates to: PFYSISPGFPRSLTLPLKHYIRL*SKVSWG
Trigger: CCCCCAAGACACCTTACTCCAGAGCCTGATATAGTG...TTTGAGAGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS-3UTR CCA 90 bp CATATTCCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTAGGAGGTGGGCGTGCTaGAACAGGCTTCTTTGTACT +
Preference number: 4 (lower is better)
Translates to: HIPFYSISPGFPRSLTLPRRWAC*NRLLCT
Trigger: AGTACAAAGAAGCCTGTTCCAGCACGCCCACCTCCT...AGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGGAATATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS-3UTR CCA 90 bp CATATTCCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTTGGGGGTCTAGGAGGTaGGAAATTAGTTGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: HIPFYSISPGFPRSLTLPWGSRR*EISWRR
Trigger: CCTCCTCCAACTAATTTCCCACCTCCTAGACCCCCA...AGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGGAATATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS-3UTR TCA 90 bp CCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTCTCAAAGGACTGGCAGTAGCTTaGTCAGAGAGTTCTTTTCCT +
Preference number: 4 (lower is better)
Translates to: PFYSISPGFPRSLTLPLKGLAVA*SESSFP
Trigger: AGGAAAAGAACTCTCTGATCAAGCTACTGCCAGTCC...TTTGAGAGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
CDS-3UTR TCA 90 bp CCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTCTCAAATCTTCCGGTAGTACTTaGTCTATGGCTAACAGTCCG +
Preference number: 4 (lower is better)
Translates to: PFYSISPGFPRSLTLPLKSSGST*SMANSP
Trigger: CGGACTGTTAGCCATAGATCAAGTACTACCGGAAGA...TTTGAGAGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS-3UTR TCA 90 bp CTAACCATCAACAACATGATCAGGGTTTCATTGCCCCAGATGTTATTTCATTGGTTGGATCTAGGTCTCTaGGGGCCCATCACTTCACCT +
Preference number: 4 (lower is better)
Translates to: LTINNMIRVSLPQMLFHWLDLGL*GPITSP
Trigger: AGGTGAAGTGATGGGCCCTCAGAGACCTAGATCCAA...CCAATGAAATAACATCTGGGGCAATGAAACCCTGATCATGTTGTTGATGGTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
CDS-3UTR TCA 90 bp CCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTCTCAAACTTCTCTTCATCATCTaGCTGTGCCGCGTCATTACT +
Preference number: 4 (lower is better)
Translates to: PFYSISPGFPRSLTLPLKLLFII*LCRVIT
Trigger: AGTAATGACGCGGCACAGTCAGATGATGAAGAGAAG...TTTGAGAGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS-3UTR GCA 90 bp CCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTCTCAAATCCACTGGTAGCACTTaGCAAATCAAGAGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: PFYSISPGFPRSLTLPLKSTGST*QIKRRL
Trigger: CAGCCTTCTCTTGATTTGGCAAGTGCTACCAGTGGA...TTTGAGAGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS-3UTR GCA 90 bp CATATTCCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTTCACCTGCTACAGTCTaGCCATCAGGTGCTTTTCCA +
Preference number: 4 (lower is better)
Translates to: HIPFYSISPGFPRSLTLPSPATV*PSGAFP
Trigger: TGGAAAAGCACCTGATGGGCAGACTGTAGCAGGTGA...AGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGGAATATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS-3UTR GCA 90 bp CATATTCCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTCCGTTGCCGAAAGGGTaGGTTTTTATCATCAGGGTC +
Preference number: 4 (lower is better)
Translates to: HIPFYSISPGFPRSLTLPPLPKG*VFIIRV
Trigger: GACCCTGATGATAAAAACGCACCCTTTCGGCAACGG...AGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGGAATATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS-3UTR CCA 90 bp CATATTCCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTCACTATATCAGGCTCTaGAGTAAGGTGTCTTGGGGG +
Preference number: 4 (lower is better)
Translates to: HIPFYSISPGFPRSLTLPHYIRL*SKVSWG
Trigger: CCCCCAAGACACCTTACTCCAGAGCCTGATATAGTG...AGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGGAATATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS-3UTR CCA 90 bp CTAACCATCAACAACATGATCAGGGTTTCATTGCCCCAGATGTTATTTCATTGGAGGAGGTGGGCGTGCTaGAACAGGCTTCTTTGTACT +
Preference number: 4 (lower is better)
Translates to: LTINNMIRVSLPQMLFHWRRWAC*NRLLCT
Trigger: AGTACAAAGAAGCCTGTTCCAGCACGCCCACCTCCT...CCAATGAAATAACATCTGGGGCAATGAAACCCTGATCATGTTGTTGATGGTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
CDS-3UTR CCA 90 bp CTAACCATCAACAACATGATCAGGGTTTCATTGCCCCAGATGTTATTTCATTGGATTAGTTGGAGGAGGTaGGCGTGCTGGAACAGGCTT +
Preference number: 4 (lower is better)
Translates to: LTINNMIRVSLPQMLFHWISWRR*ACWNRL
Trigger: AAGCCTGTTCCAGCACGCCCACCTCCTCCAACTAAT...CCAATGAAATAACATCTGGGGCAATGAAACCCTGATCATGTTGTTGATGGTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
CDS-3UTR CCA 90 bp CTAACCATCAACAACATGATCAGGGTTTCATTGCCCCAGATGTTATTTCATTGGTGGGGGTCTAGGAGGTaGGAAATTAGTTGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: LTINNMIRVSLPQMLFHWWGSRR*EISWRR
Trigger: CCTCCTCCAACTAATTTCCCACCTCCTAGACCCCCA...CCAATGAAATAACATCTGGGGCAATGAAACCCTGATCATGTTGTTGATGGTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
CDS-3UTR CCA 90 bp CCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTCTCAAAGCTTTTCCTTTTTCTTaGTGGTGGAGCAGGTCGAGA +
Preference number: 4 (lower is better)
Translates to: PFYSISPGFPRSLTLPLKAFPFS*WWSRSR
Trigger: TCTCGACCTGCTCCACCACCAAGAAAAAGGAAAAGC...TTTGAGAGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS-3UTR TCA 90 bp CATATTCCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTGGACTGGCAGTAGCTTaGTCAGAGAGTTCTTTTCCT +
Preference number: 4 (lower is better)
Translates to: HIPFYSISPGFPRSLTLPGLAVA*SESSFP
Trigger: AGGAAAAGAACTCTCTGATCAAGCTACTGCCAGTCC...AGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGGAATATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
CDS-3UTR TCA 90 bp CATATTCCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTCTTCTCTTCATCATCTaGCTGTGCCGCGTCATTACT +
Preference number: 4 (lower is better)
Translates to: HIPFYSISPGFPRSLTLPLLFII*LCRVIT
Trigger: AGTAATGACGCGGCACAGTCAGATGATGAAGAGAAG...AGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGGAATATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS-3UTR TCA 90 bp CCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTCTCAAACTGTCATCTCTTGGATaGAAAGCTATGGCAGTGACA +
Preference number: 4 (lower is better)
Translates to: PFYSISPGFPRSLTLPLKLSSLG*KAMAVT
Trigger: TGTCACTGCCATAGCTTTTCATCCAAGAGATGACAG...TTTGAGAGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371825.7
ENST00000371848.3
CDS-3UTR TCA 90 bp CCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTCTCAAATCTGGCTGCTGCTATTaGCGTAACCCTTATACTTCA +
Preference number: 4 (lower is better)
Translates to: PFYSISPGFPRSLTLPLKSGCCY*RNPYTS
Trigger: TGAAGTATAAGGGTTACGTCAATAGCAGCAGCCAGA...TTTGAGAGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS-3UTR TCA 90 bp CCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTCTCAAATGGTGCAAAGATGGCTaGTGTAACAACTGCATTGTG +
Preference number: 4 (lower is better)
Translates to: PFYSISPGFPRSLTLPLKWCKDG*CNNCIV
Trigger: CACAATGCAGTTGTTACATCAGCCATCTTTGCACCA...TTTGAGAGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS-3UTR GCA 90 bp CCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTCTCAAATGTATTCTGACTCTCTaGCTTTTGGGATTCTTCCGG +
Preference number: 4 (lower is better)
Translates to: PFYSISPGFPRSLTLPLKCILTL*LLGFFR
Trigger: CCGGAAGAATCCCAAAAGGCAGAGAGTCAGAATACA...TTTGAGAGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS-3UTR GCA 90 bp CATATTCCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTTCCACTGGTAGCACTTaGCAAATCAAGAGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: HIPFYSISPGFPRSLTLPSTGST*QIKRRL
Trigger: CAGCCTTCTCTTGATTTGGCAAGTGCTACCAGTGGA...AGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGGAATATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS-3UTR GCA 90 bp CTAACCATCAACAACATGATCAGGGTTTCATTGCCCCAGATGTTATTTCATTGGTCACCTGCTACAGTCTaGCCATCAGGTGCTTTTCCA +
Preference number: 4 (lower is better)
Translates to: LTINNMIRVSLPQMLFHWSPATV*PSGAFP
Trigger: TGGAAAAGCACCTGATGGGCAGACTGTAGCAGGTGA...CCAATGAAATAACATCTGGGGCAATGAAACCCTGATCATGTTGTTGATGGTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
CDS-3UTR GCA 90 bp CTAACCATCAACAACATGATCAGGGTTTCATTGCCCCAGATGTTATTTCATTGGCCGTTGCCGAAAGGGTaGGTTTTTATCATCAGGGTC +
Preference number: 4 (lower is better)
Translates to: LTINNMIRVSLPQMLFHWPLPKG*VFIIRV
Trigger: GACCCTGATGATAAAAACGCACCCTTTCGGCAACGG...CCAATGAAATAACATCTGGGGCAATGAAACCCTGATCATGTTGTTGATGGTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
CDS-3UTR GCA 90 bp CCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTCTCAAATTGCAAAATGGCCGTTaGCGAAAGGGTGCGTTTTTA +
Preference number: 4 (lower is better)
Translates to: PFYSISPGFPRSLTLPLKLQNGR*RKGAFL
Trigger: TAAAAACGCACCCTTTCGGCAACGGCCATTTTGCAA...TTTGAGAGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS-3UTR CCA 90 bp CTAACCATCAACAACATGATCAGGGTTTCATTGCCCCAGATGTTATTTCATTGGCACTATATCAGGCTCTaGAGTAAGGTGTCTTGGGGG +
Preference number: 4 (lower is better)
Translates to: LTINNMIRVSLPQMLFHWHYIRL*SKVSWG
Trigger: CCCCCAAGACACCTTACTCCAGAGCCTGATATAGTG...CCAATGAAATAACATCTGGGGCAATGAAACCCTGATCATGTTGTTGATGGTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
CDS-3UTR TCA 90 bp CTAACCATCAACAACATGATCAGGGTTTCATTGCCCCAGATGTTATTTCATTGGGGACTGGCAGTAGCTTaGTCAGAGAGTTCTTTTCCT +
Preference number: 4 (lower is better)
Translates to: LTINNMIRVSLPQMLFHWGLAVA*SESSFP
Trigger: AGGAAAAGAACTCTCTGATCAAGCTACTGCCAGTCC...CCAATGAAATAACATCTGGGGCAATGAAACCCTGATCATGTTGTTGATGGTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
CDS-3UTR TCA 90 bp CTAACCATCAACAACATGATCAGGGTTTCATTGCCCCAGATGTTATTTCATTGGTCTTCCGGTAGTACTTaGTCTATGGCTAACAGTCCG +
Preference number: 4 (lower is better)
Translates to: LTINNMIRVSLPQMLFHWSSGST*SMANSP
Trigger: CGGACTGTTAGCCATAGATCAAGTACTACCGGAAGA...CCAATGAAATAACATCTGGGGCAATGAAACCCTGATCATGTTGTTGATGGTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
CDS-3UTR TCA 90 bp CTAACCATCAACAACATGATCAGGGTTTCATTGCCCCAGATGTTATTTCATTGGCTTCTCTTCATCATCTaGCTGTGCCGCGTCATTACT +
Preference number: 4 (lower is better)
Translates to: LTINNMIRVSLPQMLFHWLLFII*LCRVIT
Trigger: AGTAATGACGCGGCACAGTCAGATGATGAAGAGAAG...CCAATGAAATAACATCTGGGGCAATGAAACCCTGATCATGTTGTTGATGGTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
CDS-3UTR TCA 90 bp CCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTCTCAAATCAGTATCTGTTGGCTaGGACTGTAACTTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: PFYSISPGFPRSLTLPLKSVSVG*DCNFSS
Trigger: TGAAGAGAAGTTACAGTCTCAGCCAACAGATACTGA...TTTGAGAGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS-3UTR TCA 90 bp CCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTCTCAAAAGTAATCGGCCACAGTaGGAAAATTTCATGGTCCAA +
Preference number: 4 (lower is better)
Translates to: PFYSISPGFPRSLTLPLKSNRPQ*ENFMVQ
Trigger: TTGGACCATGAAATTTTCTCACTGTGGCCGATTACT...TTTGAGAGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS-3UTR TCA 90 bp CATATTCCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTTCTGGCTGCTGCTATTaGCGTAACCCTTATACTTCA +
Preference number: 4 (lower is better)
Translates to: HIPFYSISPGFPRSLTLPSGCCY*RNPYTS
Trigger: TGAAGTATAAGGGTTACGTCAATAGCAGCAGCCAGA...AGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGGAATATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS-3UTR TCA 90 bp CATATTCCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTTGGTGCAAAGATGGCTaGTGTAACAACTGCATTGTG +
Preference number: 4 (lower is better)
Translates to: HIPFYSISPGFPRSLTLPWCKDG*CNNCIV
Trigger: CACAATGCAGTTGTTACATCAGCCATCTTTGCACCA...AGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGGAATATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS-3UTR GCA 90 bp CATATTCCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTTGTATTCTGACTCTCTaGCTTTTGGGATTCTTCCGG +
Preference number: 4 (lower is better)
Translates to: HIPFYSISPGFPRSLTLPCILTL*LLGFFR
Trigger: CCGGAAGAATCCCAAAAGGCAGAGAGTCAGAATACA...AGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGGAATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS-3UTR GCA 90 bp CCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTCTCAAATACTTTCTGAAGCCATaGTTGCGGTTAGGAGAGAAT +
Preference number: 4 (lower is better)
Translates to: PFYSISPGFPRSLTLPLKYFLKP*LRLGEN
Trigger: ATTCTCTCCTAACCGCAAGCATGGCTTCAGAAAGTA...TTTGAGAGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS-3UTR GCA 90 bp CATATTCCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTTTGCAAAATGGCCGTTaGCGAAAGGGTGCGTTTTTA +
Preference number: 4 (lower is better)
Translates to: HIPFYSISPGFPRSLTLPLQNGR*RKGAFL
Trigger: TAAAAACGCACCCTTTCGGCAACGGCCATTTTGCAA...AGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGGAATATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS-3UTR GCA 90 bp CATATTCCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTATCATGGCTGAAACTTaGTTTGATCTGGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: HIPFYSISPGFPRSLTLPIMAET*FDLAAA
Trigger: AGCAGCAGCCAGATCAAAGCAAGTTTCAGCCATGAT...AGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGGAATATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371848.3
CDS-3UTR GCA 90 bp CCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTCTCAAAGTGAGCAAAGCCTGGTaGTCATGGATAAAGAATGAA +
Preference number: 4 (lower is better)
Translates to: PFYSISPGFPRSLTLPLKVSKAW*SWIKNE
Trigger: TTCATTCTTTATCCATGAGCACCAGGCTTTGCTCAC...TTTGAGAGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
CDS-3UTR GCA 90 bp CCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTCTCAAAATAACGAGAACTCATTaGAGAAGGTGTGGCATCCAA +
Preference number: 4 (lower is better)
Translates to: PFYSISPGFPRSLTLPLKITRTH*RRCGIQ
Trigger: TTGGATGCCACACCTTCTGCAATGAGTTCTCGTTAT...TTTGAGAGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371848.3
CDS-3UTR CCA 90 bp CCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTCTCAAACGTGGTTTCATCTACTaGTTTCTCACAGGTTTCATC +
Preference number: 4 (lower is better)
Translates to: PFYSISPGFPRSLTLPLKRGFIY*FLTGFI
Trigger: GATGAAACCTGTGAGAAACCAGTAGATGAAACCACG...TTTGAGAGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS-3UTR CCA 90 bp CTAACCATCAACAACATGATCAGGGTTTCATTGCCCCAGATGTTATTTCATTGGGCTTTTCCTTTTTCTTaGTGGTGGAGCAGGTCGAGA +
Preference number: 4 (lower is better)
Translates to: LTINNMIRVSLPQMLFHWAFPFS*WWSRSR
Trigger: TCTCGACCTGCTCCACCACCAAGAAAAAGGAAAAGC...CCAATGAAATAACATCTGGGGCAATGAAACCCTGATCATGTTGTTGATGGTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
CDS-3UTR CCA 90 bp CCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTCTCAAATTTATATTTGCAAAATaGCCGTTGCCGAAAGGGTGC +
Preference number: 4 (lower is better)
Translates to: PFYSISPGFPRSLTLPLKFIFAK*PLPKGC
Trigger: GCACCCTTTCGGCAACGGCCATTTTGCAAATATAAA...TTTGAGAGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS-3UTR TCA 90 bp CATATTCCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTTGTTTCCTTGAATGTTaGAAGCCCAACTTTTCCTGG +
Preference number: 4 (lower is better)
Translates to: HIPFYSISPGFPRSLTLPCFLEC*KPNFSW
Trigger: CCAGGAAAAGTTGGGCTTTCAACATTCAAGGAAACA...AGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGGAATATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254029.8
ENST00000371825.7
CDS-3UTR TCA 90 bp CCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTCTCAAATGTTCTCTGTTTCCTTaGATGTTGAAAGCCCAACTT +
Preference number: 4 (lower is better)
Translates to: PFYSISPGFPRSLTLPLKCSLFP*MLKAQL
Trigger: AAGTTGGGCTTTCAACATTCAAGGAAACAGAGAACA...TTTGAGAGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254029.8
ENST00000371825.7
CDS-3UTR TCA 90 bp CCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTCTCAAAAAATCAAGAGAAGGCTaGGAATCCTTAACCGTACTT +
Preference number: 4 (lower is better)
Translates to: PFYSISPGFPRSLTLPLKKSREG*ESLTVL
Trigger: AAGTACGGTTAAGGATTCTCAGCCTTCTCTTGATTT...TTTGAGAGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS-3UTR TCA 90 bp CATATTCCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTTCAGTATCTGTTGGCTaGGACTGTAACTTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: HIPFYSISPGFPRSLTLPSVSVG*DCNFSS
Trigger: TGAAGAGAAGTTACAGTCTCAGCCAACAGATACTGA...AGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGGAATATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS-3UTR TCA 90 bp CATATTCCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTAGTAATCGGCCACAGTaGGAAAATTTCATGGTCCAA +
Preference number: 4 (lower is better)
Translates to: HIPFYSISPGFPRSLTLPSNRPQ*ENFMVQ
Trigger: TTGGACCATGAAATTTTCTCACTGTGGCCGATTACT...AGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGGAATATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS-3UTR TCA 90 bp CTAACCATCAACAACATGATCAGGGTTTCATTGCCCCAGATGTTATTTCATTGGCTGTCATCTCTTGGATaGAAAGCTATGGCAGTGACA +
Preference number: 4 (lower is better)
Translates to: LTINNMIRVSLPQMLFHWLSSLG*KAMAVT
Trigger: TGTCACTGCCATAGCTTTTCATCCAAGAGATGACAG...CCAATGAAATAACATCTGGGGCAATGAAACCCTGATCATGTTGTTGATGGTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254029.8
ENST00000371825.7
CDS-3UTR TCA 90 bp CATATTCCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTGCATATTTGCCATTCTaGCAGAAATTTGCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: HIPFYSISPGFPRSLTLPAYLPF*QKFAAV
Trigger: CACAGCTGCAAATTTCTGTCAGAATGGCAAATATGC...AGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGGAATATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371825.7
ENST00000371848.3
CDS-3UTR TCA 90 bp CTAACCATCAACAACATGATCAGGGTTTCATTGCCCCAGATGTTATTTCATTGGTCTGGCTGCTGCTATTaGCGTAACCCTTATACTTCA +
Preference number: 4 (lower is better)
Translates to: LTINNMIRVSLPQMLFHWSGCCY*RNPYTS
Trigger: TGAAGTATAAGGGTTACGTCAATAGCAGCAGCCAGA...CCAATGAAATAACATCTGGGGCAATGAAACCCTGATCATGTTGTTGATGGTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
CDS-3UTR TCA 90 bp CTAACCATCAACAACATGATCAGGGTTTCATTGCCCCAGATGTTATTTCATTGGTGGTGCAAAGATGGCTaGTGTAACAACTGCATTGTG +
Preference number: 4 (lower is better)
Translates to: LTINNMIRVSLPQMLFHWWCKDG*CNNCIV
Trigger: CACAATGCAGTTGTTACATCAGCCATCTTTGCACCA...CCAATGAAATAACATCTGGGGCAATGAAACCCTGATCATGTTGTTGATGGTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
CDS-3UTR GCA 90 bp CTAACCATCAACAACATGATCAGGGTTTCATTGCCCCAGATGTTATTTCATTGGTGTATTCTGACTCTCTaGCTTTTGGGATTCTTCCGG +
Preference number: 4 (lower is better)
Translates to: LTINNMIRVSLPQMLFHWCILTL*LLGFFR
Trigger: CCGGAAGAATCCCAAAAGGCAGAGAGTCAGAATACA...CCAATGAAATAACATCTGGGGCAATGAAACCCTGATCATGTTGTTGATGGTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
CDS-3UTR GCA 90 bp CCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTCTCAAATCCTTTGACTTCCACTaGTTCCTTGTTCAATACTTC +
Preference number: 4 (lower is better)
Translates to: PFYSISPGFPRSLTLPLKSFDFH*FLVQYF
Trigger: GAAGTATTGAACAAGGAAGCAGTGGAAGTCAAAGGA...TTTGAGAGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS-3UTR GCA 90 bp CATATTCCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTTACTTTCTGAAGCCATaGTTGCGGTTAGGAGAGAAT +
Preference number: 4 (lower is better)
Translates to: HIPFYSISPGFPRSLTLPYFLKP*LRLGEN
Trigger: ATTCTCTCCTAACCGCAAGCATGGCTTCAGAAAGTA...AGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGGAATATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS-3UTR GCA 90 bp CCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTCTCAAATCCTTTGAAACCGTGTaGTGCTTTGAATTTAACTGG +
Preference number: 4 (lower is better)
Translates to: PFYSISPGFPRSLTLPLKSFETV*CFEFNW
Trigger: CCAGTTAAATTCAAAGCAGCACACGGTTTCAAAGGA...TTTGAGAGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS-3UTR GCA 90 bp CTAACCATCAACAACATGATCAGGGTTTCATTGCCCCAGATGTTATTTCATTGGTTGCAAAATGGCCGTTaGCGAAAGGGTGCGTTTTTA +
Preference number: 4 (lower is better)
Translates to: LTINNMIRVSLPQMLFHWLQNGR*RKGAFL
Trigger: TAAAAACGCACCCTTTCGGCAACGGCCATTTTGCAA...CCAATGAAATAACATCTGGGGCAATGAAACCCTGATCATGTTGTTGATGGTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
CDS-3UTR GCA 90 bp CTAACCATCAACAACATGATCAGGGTTTCATTGCCCCAGATGTTATTTCATTGGATCATGGCTGAAACTTaGTTTGATCTGGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: LTINNMIRVSLPQMLFHWIMAET*FDLAAA
Trigger: AGCAGCAGCCAGATCAAAGCAAGTTTCAGCCATGAT...CCAATGAAATAACATCTGGGGCAATGAAACCCTGATCATGTTGTTGATGGTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254029.8
ENST00000371822.9
CDS-3UTR GCA 90 bp CCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTCTCAAAAACAAACACTTTGATTaGTCCAGTGAAGTCAGCAGA +
Preference number: 4 (lower is better)
Translates to: PFYSISPGFPRSLTLPLKNKHFD*SSEVSR
Trigger: TCTGCTGACTTCACTGGAGCAATCAAAGTGTTTGTT...TTTGAGAGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS-3UTR CCA 90 bp CCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTCTCAAAGTAGTACTTGATCTATaGCTAACAGTCCGGGTATAT +
Preference number: 4 (lower is better)
Translates to: PFYSISPGFPRSLTLPLKVVLDL*LTVRVY
Trigger: ATATACCCGGACTGTTAGCCATAGATCAAGTACTAC...TTTGAGAGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS-3UTR CCA 90 bp CATATTCCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTCGTGGTTTCATCTACTaGTTTCTCACAGGTTTCATC +
Preference number: 4 (lower is better)
Translates to: HIPFYSISPGFPRSLTLPRGFIY*FLTGFI
Trigger: GATGAAACCTGTGAGAAACCAGTAGATGAAACCACG...AGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGGAATATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS-3UTR CCA 90 bp CCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTCTCAAAAACTGGTCTTGTGTATaGCATTCCTTCATCATCACT +
Preference number: 4 (lower is better)
Translates to: PFYSISPGFPRSLTLPLKNWSCV*HSFIIT
Trigger: AGTGATGATGAAGGAATGCCATACACAAGACCAGTT...TTTGAGAGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS-3UTR CCA 90 bp CATATTCCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTTTTATATTTGCAAAATaGCCGTTGCCGAAAGGGTGC +
Preference number: 4 (lower is better)
Translates to: HIPFYSISPGFPRSLTLPFIFAK*PLPKGC
Trigger: GCACCCTTTCGGCAACGGCCATTTTGCAAATATAAA...AGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGGAATATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS-3UTR CCA 90 bp CCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTCTCAAAATACCTGTCATCTCTTaGATGAAAAGCTATGGCAGT +
Preference number: 4 (lower is better)
Translates to: PFYSISPGFPRSLTLPLKIPVIS*MKSYGS
Trigger: ACTGCCATAGCTTTTCATCCAAGAGATGACAGGTAT...TTTGAGAGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371825.7
ENST00000371848.3
CDS-3UTR CCA 90 bp CATATTCCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTTCATTGCAGAAGGTGTaGCATCCAAAACTTCAGCAT +
Preference number: 4 (lower is better)
Translates to: HIPFYSISPGFPRSLTLPSLQKV*HPKLQH
Trigger: ATGCTGAAGTTTTGGATGCCACACCTTCTGCAATGA...AGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGGAATATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371848.3
CDS-3UTR TCA 90 bp CTAACCATCAACAACATGATCAGGGTTTCATTGCCCCAGATGTTATTTCATTGGTGTTTCCTTGAATGTTaGAAGCCCAACTTTTCCTGG +
Preference number: 4 (lower is better)
Translates to: LTINNMIRVSLPQMLFHWCFLEC*KPNFSW
Trigger: CCAGGAAAAGTTGGGCTTTCAACATTCAAGGAAACA...CCAATGAAATAACATCTGGGGCAATGAAACCCTGATCATGTTGTTGATGGTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254029.8
ENST00000371825.7
CDS-3UTR TCA 90 bp CCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTCTCAAAAGCTGTAGTACTTTCTaGCTCTCCTCAATAATACTT +
Preference number: 4 (lower is better)
Translates to: PFYSISPGFPRSLTLPLKSCSTF*LSSIIL
Trigger: AAGTATTATTGAGGAGAGTCAGAAAGTACTACAGCT...TTTGAGAGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
CDS-3UTR TCA 90 bp CCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTCTCAAATCAGTTGAACTTGTTTaGGTTAACTTCGTGGTTTCA +
Preference number: 4 (lower is better)
Translates to: PFYSISPGFPRSLTLPLKSVELV*VNFVVS
Trigger: TGAAACCACGAAGTTAACTCAAACAAGTTCAACTGA...TTTGAGAGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS-3UTR TCA 90 bp CTAACCATCAACAACATGATCAGGGTTTCATTGCCCCAGATGTTATTTCATTGGTCAGTATCTGTTGGCTaGGACTGTAACTTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: LTINNMIRVSLPQMLFHWSVSVG*DCNFSS
Trigger: TGAAGAGAAGTTACAGTCTCAGCCAACAGATACTGA...CCAATGAAATAACATCTGGGGCAATGAAACCCTGATCATGTTGTTGATGGTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
CDS-3UTR TCA 90 bp CTAACCATCAACAACATGATCAGGGTTTCATTGCCCCAGATGTTATTTCATTGGAGTAATCGGCCACAGTaGGAAAATTTCATGGTCCAA +
Preference number: 4 (lower is better)
Translates to: LTINNMIRVSLPQMLFHWSNRPQ*ENFMVQ
Trigger: TTGGACCATGAAATTTTCTCACTGTGGCCGATTACT...CCAATGAAATAACATCTGGGGCAATGAAACCCTGATCATGTTGTTGATGGTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
CDS-3UTR TCA 90 bp CATATTCCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTGTGATCAATTTTGTCTaGCCATCTACTTCATTCCAC +
Preference number: 4 (lower is better)
Translates to: HIPFYSISPGFPRSLTLPVINFV*PSTSFH
Trigger: GTGGAATGAAGTAGATGGTCAGACAAAATTGATCAC...AGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGGAATATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371825.7
ENST00000371848.3
CDS-3UTR TCA 90 bp CCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTCTCAAAAGAAATTTGCAGCTGTaGTCAATTTTGTCTGACCAT +
Preference number: 4 (lower is better)
Translates to: PFYSISPGFPRSLTLPLKRNLQL*SILSDH
Trigger: ATGGTCAGACAAAATTGATCACAGCTGCAAATTTCT...TTTGAGAGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371825.7
ENST00000371848.3
CDS-3UTR TCA 90 bp CTAACCATCAACAACATGATCAGGGTTTCATTGCCCCAGATGTTATTTCATTGGGCATATTTGCCATTCTaGCAGAAATTTGCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: LTINNMIRVSLPQMLFHWAYLPF*QKFAAV
Trigger: CACAGCTGCAAATTTCTGTCAGAATGGCAAATATGC...CCAATGAAATAACATCTGGGGCAATGAAACCCTGATCATGTTGTTGATGGTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254029.8
ENST00000371825.7
CDS-3UTR TCA 90 bp CCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTCTCAAATCAAATCATATAGTCTaGTTCTGGAGTCATTTGAGG +
Preference number: 4 (lower is better)
Translates to: PFYSISPGFPRSLTLPLKSNHIV*FWSHLR
Trigger: CCTCAAATGACTCCAGAATCAGACTATATGATTTGA...TTTGAGAGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS-3UTR TCA 90 bp CCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTCTCAAAAACATACTTATCTTCTaGACCACTAACGAGGTAAGT +
Preference number: 4 (lower is better)
Translates to: PFYSISPGFPRSLTLPLKNILIF*TTNEVS
Trigger: ACTTACCTCGTTAGTGGTTCAGAAGATAAGTATGTT...TTTGAGAGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371848.3
CDS-3UTR TCA 90 bp CATATTCCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTTTCAAATGTCTTGGATaGAAAGCTATGGCAGTGACA +
Preference number: 4 (lower is better)
Translates to: HIPFYSISPGFPRSLTLPFKCLG*KAMAVT
Trigger: TGTCACTGCCATAGCTTTTCATCCAAGACATTTGAA...AGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGGAATATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371822.9
CDS-3UTR GCA 90 bp CATATTCCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTTCCTTTGACTTCCACTaGTTCCTTGTTCAATACTTC +
Preference number: 4 (lower is better)
Translates to: HIPFYSISPGFPRSLTLPSFDFH*FLVQYF
Trigger: GAAGTATTGAACAAGGAAGCAGTGGAAGTCAAAGGA...AGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGGAATATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS-3UTR GCA 90 bp CTAACCATCAACAACATGATCAGGGTTTCATTGCCCCAGATGTTATTTCATTGGTACTTTCTGAAGCCATaGTTGCGGTTAGGAGAGAAT +
Preference number: 4 (lower is better)
Translates to: LTINNMIRVSLPQMLFHWYFLKP*LRLGEN
Trigger: ATTCTCTCCTAACCGCAAGCATGGCTTCAGAAAGTA...CCAATGAAATAACATCTGGGGCAATGAAACCCTGATCATGTTGTTGATGGTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
CDS-3UTR GCA 90 bp CATATTCCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTTATTCCTCAGCAAGGTaGTTTGCTCTCTTTACTGAT +
Preference number: 4 (lower is better)
Translates to: HIPFYSISPGFPRSLTLPYSSAR*FALFTD
Trigger: ATCAGTAAAGAGAGCAAAGCACCTTGCTGAGGAATA...AGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGGAATATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS-3UTR GCA 90 bp CATATTCCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTTCCTTTGAAACCGTGTaGTGCTTTGAATTTAACTGG +
Preference number: 4 (lower is better)
Translates to: HIPFYSISPGFPRSLTLPSFETV*CFEFNW
Trigger: CCAGTTAAATTCAAAGCAGCACACGGTTTCAAAGGA...AGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGGAATATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS-3UTR CCA 90 bp CATATTCCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTGTAGTACTTGATCTATaGCTAACAGTCCGGGTATAT +
Preference number: 4 (lower is better)
Translates to: HIPFYSISPGFPRSLTLPVVLDL*LTVRVY
Trigger: ATATACCCGGACTGTTAGCCATAGATCAAGTACTAC...AGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGGAATATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS-3UTR CCA 90 bp CCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTCTCAAAAGTGAGAAAATTTCATaGTCCAAACAGCTCCCATAT +
Preference number: 4 (lower is better)
Translates to: PFYSISPGFPRSLTLPLKSEKIS*SKQLPY
Trigger: ATATGGGAGCTGTTTGGACCATGAAATTTTCTCACT...TTTGAGAGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS-3UTR CCA 90 bp CATATTCCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTATACCTGTCATCTCTTaGATGAAAAGCTATGGCAGT +
Preference number: 4 (lower is better)
Translates to: HIPFYSISPGFPRSLTLPIPVIS*MKSYGS
Trigger: ACTGCCATAGCTTTTCATCCAAGAGATGACAGGTAT...AGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGGAATATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371825.7
ENST00000371848.3
CDS-3UTR TCA 90 bp CTAACCATCAACAACATGATCAGGGTTTCATTGCCCCAGATGTTATTTCATTGGTGTTCTCTGTTTCCTTaGATGTTGAAAGCCCAACTT +
Preference number: 4 (lower is better)
Translates to: LTINNMIRVSLPQMLFHWCSLFP*MLKAQL
Trigger: AAGTTGGGCTTTCAACATTCAAGGAAACAGAGAACA...CCAATGAAATAACATCTGGGGCAATGAAACCCTGATCATGTTGTTGATGGTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254029.8
ENST00000371825.7
CDS-3UTR TCA 90 bp CATATTCCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTTCAGTTGAACTTGTTTaGGTTAACTTCGTGGTTTCA +
Preference number: 4 (lower is better)
Translates to: HIPFYSISPGFPRSLTLPSVELV*VNFVVS
Trigger: TGAAACCACGAAGTTAACTCAAACAAGTTCAACTGA...AGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGGAATATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS-3UTR TCA 90 bp CTAACCATCAACAACATGATCAGGGTTTCATTGCCCCAGATGTTATTTCATTGGAAATCAAGAGAAGGCTaGGAATCCTTAACCGTACTT +
Preference number: 4 (lower is better)
Translates to: LTINNMIRVSLPQMLFHWKSREG*ESLTVL
Trigger: AAGTACGGTTAAGGATTCTCAGCCTTCTCTTGATTT...CCAATGAAATAACATCTGGGGCAATGAAACCCTGATCATGTTGTTGATGGTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
CDS-3UTR TCA 90 bp CTAACCATCAACAACATGATCAGGGTTTCATTGCCCCAGATGTTATTTCATTGGGTGATCAATTTTGTCTaGCCATCTACTTCATTCCAC +
Preference number: 4 (lower is better)
Translates to: LTINNMIRVSLPQMLFHWVINFV*PSTSFH
Trigger: GTGGAATGAAGTAGATGGTCAGACAAAATTGATCAC...CCAATGAAATAACATCTGGGGCAATGAAACCCTGATCATGTTGTTGATGGTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254029.8
ENST00000371825.7
CDS-3UTR TCA 90 bp CATATTCCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTAGAAATTTGCAGCTGTaGTCAATTTTGTCTGACCAT +
Preference number: 4 (lower is better)
Translates to: HIPFYSISPGFPRSLTLPRNLQL*SILSDH
Trigger: ATGGTCAGACAAAATTGATCACAGCTGCAAATTTCT...AGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGGAATATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371825.7
ENST00000371848.3
CDS-3UTR TCA 90 bp CATATTCCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTTCAAATCATATAGTCTaGTTCTGGAGTCATTTGAGG +
Preference number: 4 (lower is better)
Translates to: HIPFYSISPGFPRSLTLPSNHIV*FWSHLR
Trigger: CCTCAAATGACTCCAGAATCAGACTATATGATTTGA...AGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGGAATATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS-3UTR TCA 90 bp CATATTCCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTAACATACTTATCTTCTaGACCACTAACGAGGTAAGT +
Preference number: 4 (lower is better)
Translates to: HIPFYSISPGFPRSLTLPNILIF*TTNEVS
Trigger: ACTTACCTCGTTAGTGGTTCAGAAGATAAGTATGTT...AGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGGAATATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371848.3
CDS-3UTR GCA 90 bp CTAACCATCAACAACATGATCAGGGTTTCATTGCCCCAGATGTTATTTCATTGGTCCTTTGACTTCCACTaGTTCCTTGTTCAATACTTC +
Preference number: 4 (lower is better)
Translates to: LTINNMIRVSLPQMLFHWSFDFH*FLVQYF
Trigger: GAAGTATTGAACAAGGAAGCAGTGGAAGTCAAAGGA...CCAATGAAATAACATCTGGGGCAATGAAACCCTGATCATGTTGTTGATGGTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
CDS-3UTR GCA 90 bp CTAACCATCAACAACATGATCAGGGTTTCATTGCCCCAGATGTTATTTCATTGGTCCTTTGAAACCGTGTaGTGCTTTGAATTTAACTGG +
Preference number: 4 (lower is better)
Translates to: LTINNMIRVSLPQMLFHWSFETV*CFEFNW
Trigger: CCAGTTAAATTCAAAGCAGCACACGGTTTCAAAGGA...CCAATGAAATAACATCTGGGGCAATGAAACCCTGATCATGTTGTTGATGGTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
CDS-3UTR GCA 90 bp CATATTCCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTTATGTCCTTTATATTTaGAAAATGGCCGTTGCCGAA +
Preference number: 4 (lower is better)
Translates to: HIPFYSISPGFPRSLTLPYVLYI*KMAVAE
Trigger: TTCGGCAACGGCCATTTTGCAAATATAAAGGACATA...AGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGGAATATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS-3UTR GCA 90 bp CTAACCATCAACAACATGATCAGGGTTTCATTGCCCCAGATGTTATTTCATTGGAACAAACACTTTGATTaGTCCAGTGAAGTCAGCAGA +
Preference number: 4 (lower is better)
Translates to: LTINNMIRVSLPQMLFHWNKHFD*SSEVSR
Trigger: TCTGCTGACTTCACTGGAGCAATCAAAGTGTTTGTT...CCAATGAAATAACATCTGGGGCAATGAAACCCTGATCATGTTGTTGATGGTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
CDS-3UTR GCA 90 bp CATATTCCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTTACATAGAAACATTGTaGTCCAGTGTGGCAAAGAAA +
Preference number: 4 (lower is better)
Translates to: HIPFYSISPGFPRSLTLPYIETL*SSVAKK
Trigger: TTTCTTTGCCACACTGGAGCACAATGTTTCTATGTA...AGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGGAATATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
CDS-3UTR CCA 90 bp CTAACCATCAACAACATGATCAGGGTTTCATTGCCCCAGATGTTATTTCATTGGGTAGTACTTGATCTATaGCTAACAGTCCGGGTATAT +
Preference number: 4 (lower is better)
Translates to: LTINNMIRVSLPQMLFHWVVLDL*LTVRVY
Trigger: ATATACCCGGACTGTTAGCCATAGATCAAGTACTAC...CCAATGAAATAACATCTGGGGCAATGAAACCCTGATCATGTTGTTGATGGTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
CDS-3UTR CCA 90 bp CCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTCTCAAATTTGAGTTAACTTCGTaGTTTCATCTACTGGTTTCT +
Preference number: 4 (lower is better)
Translates to: PFYSISPGFPRSLTLPLKFELTS*FHLLVS
Trigger: AGAAACCAGTAGATGAAACCACGAAGTTAACTCAAA...TTTGAGAGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS-3UTR CCA 90 bp CTAACCATCAACAACATGATCAGGGTTTCATTGCCCCAGATGTTATTTCATTGGAACTGGTCTTGTGTATaGCATTCCTTCATCATCACT +
Preference number: 4 (lower is better)
Translates to: LTINNMIRVSLPQMLFHWNWSCV*HSFIIT
Trigger: AGTGATGATGAAGGAATGCCATACACAAGACCAGTT...CCAATGAAATAACATCTGGGGCAATGAAACCCTGATCATGTTGTTGATGGTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
CDS-3UTR CCA 90 bp CATATTCCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTAGTGAGAAAATTTCATaGTCCAAACAGCTCCCATAT +
Preference number: 4 (lower is better)
Translates to: HIPFYSISPGFPRSLTLPSEKIS*SKQLPY
Trigger: ATATGGGAGCTGTTTGGACCATGAAATTTTCTCACT...AGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGGAATATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS-3UTR CCA 90 bp CTAACCATCAACAACATGATCAGGGTTTCATTGCCCCAGATGTTATTTCATTGGATACCTGTCATCTCTTaGATGAAAAGCTATGGCAGT +
Preference number: 4 (lower is better)
Translates to: LTINNMIRVSLPQMLFHWIPVIS*MKSYGS
Trigger: ACTGCCATAGCTTTTCATCCAAGAGATGACAGGTAT...CCAATGAAATAACATCTGGGGCAATGAAACCCTGATCATGTTGTTGATGGTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254029.8
ENST00000371825.7
CDS-3UTR TCA 90 bp CTAACCATCAACAACATGATCAGGGTTTCATTGCCCCAGATGTTATTTCATTGGAGCTGTAGTACTTTCTaGCTCTCCTCAATAATACTT +
Preference number: 4 (lower is better)
Translates to: LTINNMIRVSLPQMLFHWSCSTF*LSSIIL
Trigger: AAGTATTATTGAGGAGAGTCAGAAAGTACTACAGCT...CCAATGAAATAACATCTGGGGCAATGAAACCCTGATCATGTTGTTGATGGTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
CDS-3UTR TCA 90 bp CTAACCATCAACAACATGATCAGGGTTTCATTGCCCCAGATGTTATTTCATTGGAACATACTTATCTTCTaGACCACTAACGAGGTAAGT +
Preference number: 4 (lower is better)
Translates to: LTINNMIRVSLPQMLFHWNILIF*TTNEVS
Trigger: ACTTACCTCGTTAGTGGTTCAGAAGATAAGTATGTT...CCAATGAAATAACATCTGGGGCAATGAAACCCTGATCATGTTGTTGATGGTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254029.8
ENST00000371822.9
CDS-3UTR GCA 90 bp CTAACCATCAACAACATGATCAGGGTTTCATTGCCCCAGATGTTATTTCATTGGTATGTCCTTTATATTTaGAAAATGGCCGTTGCCGAA +
Preference number: 4 (lower is better)
Translates to: LTINNMIRVSLPQMLFHWYVLYI*KMAVAE
Trigger: TTCGGCAACGGCCATTTTGCAAATATAAAGGACATA...CCAATGAAATAACATCTGGGGCAATGAAACCCTGATCATGTTGTTGATGGTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
CDS-3UTR GCA 90 bp CATATTCCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTTCTCTTCGAGAAATGTaGCATAATCTGACTGTTTTA +
Preference number: 4 (lower is better)
Translates to: HIPFYSISPGFPRSLTLPSLREM*HNLTVL
Trigger: TAAAACAGTCAGATTATGGCACATTTCTCGAAGAGA...AGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGGAATATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS-3UTR GCA 90 bp CATATTCCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTCATAGAAAATACATCTaGCATCATATGTCCCAATCA +
Preference number: 4 (lower is better)
Translates to: HIPFYSISPGFPRSLTLPHRKYI*HHMSQS
Trigger: TGATTGGGACATATGATGGCAGATGTATTTTCTATG...AGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGGAATATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371825.7
ENST00000371848.3
CDS-3UTR CCA 90 bp CATATTCCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTTTTGAGTTAACTTCGTaGTTTCATCTACTGGTTTCT +
Preference number: 4 (lower is better)
Translates to: HIPFYSISPGFPRSLTLPFELTS*FHLLVS
Trigger: AGAAACCAGTAGATGAAACCACGAAGTTAACTCAAA...AGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGGAATATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS-3UTR CCA 90 bp CTAACCATCAACAACATGATCAGGGTTTCATTGCCCCAGATGTTATTTCATTGGAGTGAGAAAATTTCATaGTCCAAACAGCTCCCATAT +
Preference number: 4 (lower is better)
Translates to: LTINNMIRVSLPQMLFHWSEKIS*SKQLPY
Trigger: ATATGGGAGCTGTTTGGACCATGAAATTTTCTCACT...CCAATGAAATAACATCTGGGGCAATGAAACCCTGATCATGTTGTTGATGGTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
CDS-3UTR CCA 90 bp CATATTCCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTTGGTTGTTGACCTACTaGAAACCTATATACCATTTT +
Preference number: 4 (lower is better)
Translates to: HIPFYSISPGFPRSLTLPWLLTY*KPIYHF
Trigger: AAAATGGTATATAGGTTTCCAGTAGGTCAACAACCA...AGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGGAATATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
CDS-3UTR GCA 90 bp CTAACCATCAACAACATGATCAGGGTTTCATTGCCCCAGATGTTATTTCATTGGTCTCTTCGAGAAATGTaGCATAATCTGACTGTTTTA +
Preference number: 4 (lower is better)
Translates to: LTINNMIRVSLPQMLFHWSLREM*HNLTVL
Trigger: TAAAACAGTCAGATTATGGCACATTTCTCGAAGAGA...CCAATGAAATAACATCTGGGGCAATGAAACCCTGATCATGTTGTTGATGGTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
CDS-3UTR GCA 90 bp CTAACCATCAACAACATGATCAGGGTTTCATTGCCCCAGATGTTATTTCATTGGCATAGAAAATACATCTaGCATCATATGTCCCAATCA +
Preference number: 4 (lower is better)
Translates to: LTINNMIRVSLPQMLFHWHRKYI*HHMSQS
Trigger: TGATTGGGACATATGATGGCAGATGTATTTTCTATG...CCAATGAAATAACATCTGGGGCAATGAAACCCTGATCATGTTGTTGATGGTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254029.8
ENST00000371825.7
CDS-3UTR CCA 90 bp CTAACCATCAACAACATGATCAGGGTTTCATTGCCCCAGATGTTATTTCATTGGTTTGAGTTAACTTCGTaGTTTCATCTACTGGTTTCT +
Preference number: 4 (lower is better)
Translates to: LTINNMIRVSLPQMLFHWFELTS*FHLLVS
Trigger: AGAAACCAGTAGATGAAACCACGAAGTTAACTCAAA...CCAATGAAATAACATCTGGGGCAATGAAACCCTGATCATGTTGTTGATGGTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
CDS-3UTR CCA 90 bp CTAACCATCAACAACATGATCAGGGTTTCATTGCCCCAGATGTTATTTCATTGGGTATTTCAAATGTCTTaGATGAAAAGCTATGGCAGT +
Preference number: 4 (lower is better)
Translates to: LTINNMIRVSLPQMLFHWVFQMS*MKSYGS
Trigger: ACTGCCATAGCTTTTCATCCAAGACATTTGAAATAC...CCAATGAAATAACATCTGGGGCAATGAAACCCTGATCATGTTGTTGATGGTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371822.9
CDS TCA 90 bp GCCCTCAGTTGCCGGGCTTCGGGAATGACCGGCAAAGCGGCCGCCTaGAGAGGCGGCGGTTGGTCCAGGGAATGTTGCTGCCACCGCTCC +
Preference number: 5 (lower is better)
Translates to: ALSCRASGMTGKAAA*RGGGWSRECCCHRS
Trigger: GGAGCGGTGGCAGCAACATTCCCTGGACCAACCGCCGCCTCTTCAGGCGGCCGCTTTGCCGGTCATTCCCGAAGCCCGGCAACTGAGGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000493448.1
CDS TCA 90 bp ACTGTTAAGGAAAGGGGGCCGCCCTCAGTTGCCGGGCTTCGGGAATaGCCGGCAAAGCGGCCGCCTGAAGAGGCGGCGGTTGGTCCAGGG +
Preference number: 5 (lower is better)
Translates to: TVKERGPPSVAGLRE*PAKRPPEEAAVGPG
Trigger: CCCTGGACCAACCGCCGCCTCTTCAGGCGGCCGCTTTGCCGGTCATTCCCGAAGCCCGGCAACTGAGGGCGGCCCCCTTTCCTTAACAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000493448.1
CDS TCA 90 bp GACCTCCACCCGGGCGAGACTGGGGAAGTGGGTCTCGGGCGAGGCTaGGGGAGCAGACGATCTGTAGCGAGGAGACTGTTAAGGAAAGGG +
Preference number: 5 (lower is better)
Translates to: DLHPGETGEVGLGRG*GSRRSVARRLLRKG
Trigger: CCCTTTCCTTAACAGTCTCCTCGCTACAGATCGTCTGCTCCCTCAGCCTCGCCCGAGACCCACTTCCCCAGTCTCGCCCGGGTGGAGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000493448.1
CDS CCA 90 bp AGCAGGTCGAGAAGGAGGTGGGGGTCTAGGAGGTGGGAAATTAGTTaGAGGAGGTGGGCGTGCTGGAACAGGCTTCTTTGTACTAGCCAC +
Preference number: 5 (lower is better)
Translates to: SRSRRRWGSRRWEIS*RRWACWNRLLCTSH
Trigger: GTGGCTAGTACAAAGAAGCCTGTTCCAGCACGCCCACCTCCTCCAACTAATTTCCCACCTCCTAGACCCCCACCTCCTTCTCGACCTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
ENST00000493448.1
CDS GCA 90 bp CAGTTTCTCCCGCAGCAGCAATTTACAGCAGCTGGAAGAGCTAGTTaGCCGCAAAATACCGACGCGCACCTACCCTCGCGAGATTTCGGA +
Preference number: 5 (lower is better)
Translates to: QFLPQQQFTAAGRAS*PQNTDAHLPSRDFG
Trigger: TCCGAAATCTCGCGAGGGTAGGTGCGCGTCGGTATTTTGCGGGCAACTAGCTCTTCCAGCTGCTGTAAATTGCTGCTGCGGGAGAAACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371822.9
CDS GCA 90 bp TCTCCCAGAGTTGGATCTAGGTCTCTGAGGGCCCATCACTTCACCTaGTACAGTCTGCCCATCAGGTGCTTTTCCATTTTCCTGGGCGGT +
Preference number: 5 (lower is better)
Translates to: SPRVGSRSLRAHHFT*YSLPIRCFSIFLGG
Trigger: ACCGCCCAGGAAAATGGAAAAGCACCTGATGGGCAGACTGTAGCAGGTGAAGTGATGGGCCCTCAGAGACCTAGATCCAACTCTGGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS CCA 90 bp GCGTGCTGGAACAGGCTTCTTTGTACTAGCCACTATATCAGGCTCTaGAGTAAGGTGTCTTGGGGGTTTGGCAGGGGCCACTTCTTCCAC +
Preference number: 5 (lower is better)
Translates to: ACWNRLLCTSHYIRL*SKVSWGFGRGHFFH
Trigger: GTGGAAGAAGTGGCCCCTGCCAAACCCCCAAGACACCTTACTCCAGAGCCTGATATAGTGGCTAGTACAAAGAAGCCTGTTCCAGCACGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
ENST00000493448.1
CDS CCA 90 bp TGGGGGTCTAGGAGGTGGGAAATTAGTTGGAGGAGGTGGGCGTGCTaGAACAGGCTTCTTTGTACTAGCCACTATATCAGGCTCTGGAGT +
Preference number: 5 (lower is better)
Translates to: WGSRRWEISWRRWAC*NRLLCTSHYIRLWS
Trigger: ACTCCAGAGCCTGATATAGTGGCTAGTACAAAGAAGCCTGTTCCAGCACGCCCACCTCCTCCAACTAATTTCCCACCTCCTAGACCCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
ENST00000493448.1
CDS CCA 90 bp AGAAGGAGGTGGGGGTCTAGGAGGTGGGAAATTAGTTGGAGGAGGTaGGCGTGCTGGAACAGGCTTCTTTGTACTAGCCACTATATCAGG +
Preference number: 5 (lower is better)
Translates to: RRRWGSRRWEISWRR*ACWNRLLCTSHYIR
Trigger: CCTGATATAGTGGCTAGTACAAAGAAGCCTGTTCCAGCACGCCCACCTCCTCCAACTAATTTCCCACCTCCTAGACCCCCACCTCCTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
ENST00000493448.1
CDS TCA 90 bp ATTTCCTCATCAGTAAGCTCTCTCCCAGAGTTGGATCTAGGTCTCTaGGGGCCCATCACTTCACCTGCTACAGTCTGCCCATCAGGTGCT +
Preference number: 5 (lower is better)
Translates to: ISSSVSSLPELDLGL*GPITSPATVCPSGA
Trigger: AGCACCTGATGGGCAGACTGTAGCAGGTGAAGTGATGGGCCCTCAGAGACCTAGATCCAACTCTGGGAGAGAGCTTACTGATGAGGAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS-3UTR CAA 90 bp CCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTCTCAAATTGGTCCAGGGAATGTaGCTGCCACCGCTCCCAGTG +
Preference number: 5 (lower is better)
Translates to: PFYSISPGFPRSLTLPLKLVQGM*LPPLPV
Trigger: CACTGGGAGCGGTGGCAGCAACATTCCCTGGACCAA...TTTGAGAGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
CDS-3UTR CAA 90 bp CCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTCTCAAACTGAAGAGGCGGCGGTaGGTCCAGGGAATGTTGCTG +
Preference number: 5 (lower is better)
Translates to: PFYSISPGFPRSLTLPLKLKRRR*VQGMLL
Trigger: CAGCAACATTCCCTGGACCAACCGCCGCCTCTTCAG...TTTGAGAGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
CDS-3UTR CAA 90 bp CCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTCTCAAAAGGTGTCTTGGGGGTTaGGCAGGGGCCACTTCTTCC +
Preference number: 5 (lower is better)
Translates to: PFYSISPGFPRSLTLPLKRCLGG*AGATSS
Trigger: GGAAGAAGTGGCCCCTGCCAAACCCCCAAGACACCT...TTTGAGAGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS-3UTR CAA 90 bp CATATTCCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTTTGGTCCAGGGAATGTaGCTGCCACCGCTCCCAGTG +
Preference number: 5 (lower is better)
Translates to: HIPFYSISPGFPRSLTLPLVQGM*LPPLPV
Trigger: CACTGGGAGCGGTGGCAGCAACATTCCCTGGACCAA...AGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGGAATATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
CDS-3UTR CAA 90 bp CATATTCCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTCTGAAGAGGCGGCGGTaGGTCCAGGGAATGTTGCTG +
Preference number: 5 (lower is better)
Translates to: HIPFYSISPGFPRSLTLPLKRRR*VQGMLL
Trigger: CAGCAACATTCCCTGGACCAACCGCCGCCTCTTCAG...AGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGGAATATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
CDS-3UTR CAA 90 bp CATATTCCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTAGGTGTCTTGGGGGTTaGGCAGGGGCCACTTCTTCC +
Preference number: 5 (lower is better)
Translates to: HIPFYSISPGFPRSLTLPRCLGG*AGATSS
Trigger: GGAAGAAGTGGCCCCTGCCAAACCCCCAAGACACCT...AGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGGAATATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS-3UTR CAA 90 bp CTAACCATCAACAACATGATCAGGGTTTCATTGCCCCAGATGTTATTTCATTGGAGGTGTCTTGGGGGTTaGGCAGGGGCCACTTCTTCC +
Preference number: 5 (lower is better)
Translates to: LTINNMIRVSLPQMLFHWRCLGG*AGATSS
Trigger: GGAAGAAGTGGCCCCTGCCAAACCCCCAAGACACCT...CCAATGAAATAACATCTGGGGCAATGAAACCCTGATCATGTTGTTGATGGTTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
CDS-3UTR CAA 90 bp CCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTCTCAAAACATCACCACCTCCTTaGACTTCCACTGCTTCCTTG +
Preference number: 5 (lower is better)
Translates to: PFYSISPGFPRSLTLPLKTSPPP*TSTASL
Trigger: CAAGGAAGCAGTGGAAGTCAAAGGAGGTGGTGATGT...TTTGAGAGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS-3UTR CAA 90 bp CCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTCTCAAATTTCTTCCAACCTTGTaGCGCCCTCTAGTAGATCGG +
Preference number: 5 (lower is better)
Translates to: PFYSISPGFPRSLTLPLKFLPTL*RPLVDR
Trigger: CCGATCTACTAGAGGGCGCAACAAGGTTGGAAGAAA...TTTGAGAGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS TCA 90 bp CTCACTACATTGTCTTGTCCAGCTGAGGCAAGTAATCGGCCACAGTaGGAAAATTTCATGGTCCAAACAGCTCCCATATGTTCACCACTA +
Preference number: 5 (lower is better)
Translates to: LTTLSCPAEASNRPQ*ENFMVQTAPICSPL
Trigger: TAGTGGTGAACATATGGGAGCTGTTTGGACCATGAAATTTTCTCACTGTGGCCGATTACTTGCCTCAGCTGGACAAGACAATGTAGTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS GCA 90 bp AGCAGTATGTCCTTTATATTTGCAAAATGGCCGTTGCCGAAAGGGTaGGTTTTTATCATCAGGGTCTTCATCAGTTCCACTGCATACCCC +
Preference number: 5 (lower is better)
Translates to: SSMSFIFAKWPLPKG*VFIIRVFISSTAYP
Trigger: GGGGTATGCAGTGGAACTGATGAAGACCCTGATGATAAAAACGCACCCTTTCGGCAACGGCCATTTTGCAAATATAAAGGACATACTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS-3UTR CAA 90 bp CCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTCTCAAAAGGACTGGCAGTAGCTaGATCAGAGAGTTCTTTTCC +
Preference number: 5 (lower is better)
Translates to: PFYSISPGFPRSLTLPLKRTGSS*IREFFS
Trigger: GGAAAAGAACTCTCTGATCAAGCTACTGCCAGTCCT...TTTGAGAGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
CDS-3UTR CAA 90 bp CCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTCTCAAAAACAGTCCGGGTATATaGCTCAGATCTGTTCTAGCC +
Preference number: 5 (lower is better)
Translates to: PFYSISPGFPRSLTLPLKNSPGI*LRSVLA
Trigger: GGCTAGAACAGATCTGAGCAATATACCCGGACTGTT...TTTGAGAGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
CDS-3UTR CAA 90 bp CATATTCCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTACATCACCACCTCCTTaGACTTCCACTGCTTCCTTG +
Preference number: 5 (lower is better)
Translates to: HIPFYSISPGFPRSLTLPTSPPP*TSTASL
Trigger: CAAGGAAGCAGTGGAAGTCAAAGGAGGTGGTGATGT...AGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGGAATATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS-3UTR CAA 90 bp CATATTCCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTTTTCTTCCAACCTTGTaGCGCCCTCTAGTAGATCGG +
Preference number: 5 (lower is better)
Translates to: HIPFYSISPGFPRSLTLPFLPTL*RPLVDR
Trigger: CCGATCTACTAGAGGGCGCAACAAGGTTGGAAGAAA...AGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGGAATATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS-3UTR CAA 90 bp CCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTCTCAAATGGCTGAAACTTGCTTaGATCTGGCTGCTGCTATTG +
Preference number: 5 (lower is better)
Translates to: PFYSISPGFPRSLTLPLKWLKLA*IWLLLL
Trigger: CAATAGCAGCAGCCAGATCAAAGCAAGTTTCAGCCA...TTTGAGAGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371848.3
CDS-3UTR CAA 90 bp CCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTCTCAAACATAACGAGAACTCATaGCAGAAGGTGTGGCATCCA +
Preference number: 5 (lower is better)
Translates to: PFYSISPGFPRSLTLPLKHNENS*QKVWHP
Trigger: TGGATGCCACACCTTCTGCAATGAGTTCTCGTTATG...TTTGAGAGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371848.3
CDS TCA 90 bp ACTATTTTATCTCCACTGGTAGCACTTGCCAAATCAAGAGAAGGCTaGGAATCCTTAACCGTACTTTCTGAAGCCATGCTTGCGGTTAGG +
Preference number: 5 (lower is better)
Translates to: TILSPLVALAKSREG*ESLTVLSEAMLAVR
Trigger: CCTAACCGCAAGCATGGCTTCAGAAAGTACGGTTAAGGATTCTCAGCCTTCTCTTGATTTGGCAAGTGCTACCAGTGGAGATAAAATAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS-3UTR CAA 90 bp CCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTCTCAAAGCTGCTCAGTTGAACTaGTTTGAGTTAACTTCGTGG +
Preference number: 5 (lower is better)
Translates to: PFYSISPGFPRSLTLPLKAAQLN*FELTSW
Trigger: CCACGAAGTTAACTCAAACAAGTTCAACTGAGCAGC...TTTGAGAGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS-3UTR CAA 90 bp CTAACCATCAACAACATGATCAGGGTTTCATTGCCCCAGATGTTATTTCATTGGACATCACCACCTCCTTaGACTTCCACTGCTTCCTTG +
Preference number: 5 (lower is better)
Translates to: LTINNMIRVSLPQMLFHWTSPPP*TSTASL
Trigger: CAAGGAAGCAGTGGAAGTCAAAGGAGGTGGTGATGT...CCAATGAAATAACATCTGGGGCAATGAAACCCTGATCATGTTGTTGATGGTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
CDS-3UTR CAA 90 bp CCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTCTCAAACATATTCTCACTACATaGTCTTGTCCAGCTGAGGCA +
Preference number: 5 (lower is better)
Translates to: PFYSISPGFPRSLTLPLKHILTT*SCPAEA
Trigger: TGCCTCAGCTGGACAAGACAATGTAGTGAGAATATG...TTTGAGAGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS-3UTR CAA 90 bp CATATTCCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTTTTGCAAAATGGCCGTaGCCGAAAGGGTGCGTTTTT +
Preference number: 5 (lower is better)
Translates to: HIPFYSISPGFPRSLTLPFAKWP*PKGCVF
Trigger: AAAAACGCACCCTTTCGGCAACGGCCATTTTGCAAA...AGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGGAATATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS-3UTR CAA 90 bp CTAACCATCAACAACATGATCAGGGTTTCATTGCCCCAGATGTTATTTCATTGGTTTCTTCCAACCTTGTaGCGCCCTCTAGTAGATCGG +
Preference number: 5 (lower is better)
Translates to: LTINNMIRVSLPQMLFHWFLPTL*RPLVDR
Trigger: CCGATCTACTAGAGGGCGCAACAAGGTTGGAAGAAA...CCAATGAAATAACATCTGGGGCAATGAAACCCTGATCATGTTGTTGATGGTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
CDS-3UTR CAA 90 bp CATATTCCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTTGGCTGAAACTTGCTTaGATCTGGCTGCTGCTATTG +
Preference number: 5 (lower is better)
Translates to: HIPFYSISPGFPRSLTLPWLKLA*IWLLLL
Trigger: CAATAGCAGCAGCCAGATCAAAGCAAGTTTCAGCCA...AGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGGAATATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371848.3
CDS-3UTR CAA 90 bp CCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTCTCAAAACATCAAACTTGGGTTaGGTGCAAAGATGGCTGATG +
Preference number: 5 (lower is better)
Translates to: PFYSISPGFPRSLTLPLKTSNLG*VQRWLM
Trigger: CATCAGCCATCTTTGCACCAAACCCAAGTTTGATGT...TTTGAGAGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS-3UTR CAA 90 bp CATATTCCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTCCACTGAAACTTGCTTaGATCTGGCTGCTGCTATTG +
Preference number: 5 (lower is better)
Translates to: HIPFYSISPGFPRSLTLPPLKLA*IWLLLL
Trigger: CAATAGCAGCAGCCAGATCAAAGCAAGTTTCAGTGG...AGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGGAATATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371825.7
CDS GCA 90 bp TCAAGGAGATCAGCAGTATGTCCTTTATATTTGCAAAATGGCCGTTaGCGAAAGGGTGCGTTTTTATCATCAGGGTCTTCATCAGTTCCA +
Preference number: 5 (lower is better)
Translates to: SRRSAVCPLYLQNGR*RKGAFLSSGSSSVP
Trigger: TGGAACTGATGAAGACCCTGATGATAAAAACGCACCCTTTCGGCAACGGCCATTTTGCAAATATAAAGGACATACTGCTGATCTCCTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS-3UTR CAA 90 bp CTAACCATCAACAACATGATCAGGGTTTCATTGCCCCAGATGTTATTTCATTGGAGGACTGGCAGTAGCTaGATCAGAGAGTTCTTTTCC +
Preference number: 5 (lower is better)
Translates to: LTINNMIRVSLPQMLFHWRTGSS*IREFFS
Trigger: GGAAAAGAACTCTCTGATCAAGCTACTGCCAGTCCT...CCAATGAAATAACATCTGGGGCAATGAAACCCTGATCATGTTGTTGATGGTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
CDS-3UTR CAA 90 bp CTAACCATCAACAACATGATCAGGGTTTCATTGCCCCAGATGTTATTTCATTGGAACAGTCCGGGTATATaGCTCAGATCTGTTCTAGCC +
Preference number: 5 (lower is better)
Translates to: LTINNMIRVSLPQMLFHWNSPGI*LRSVLA
Trigger: GGCTAGAACAGATCTGAGCAATATACCCGGACTGTT...CCAATGAAATAACATCTGGGGCAATGAAACCCTGATCATGTTGTTGATGGTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
CDS-3UTR CAA 90 bp CATATTCCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTGCTGCTCAGTTGAACTaGTTTGAGTTAACTTCGTGG +
Preference number: 5 (lower is better)
Translates to: HIPFYSISPGFPRSLTLPAAQLN*FELTSW
Trigger: CCACGAAGTTAACTCAAACAAGTTCAACTGAGCAGC...AGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGGAATATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS-3UTR CAA 90 bp CCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTCTCAAAAAACCGTGTGCTGCTTaGAATTTAACTGGTCTTGTG +
Preference number: 5 (lower is better)
Translates to: PFYSISPGFPRSLTLPLKKPCAA*NLTGLV
Trigger: CACAAGACCAGTTAAATTCAAAGCAGCACACGGTTT...TTTGAGAGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS-3UTR CAA 90 bp CCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTCTCAAATTCACCACTAAGATCTaGCACCACTTTGATCTGATC +
Preference number: 5 (lower is better)
Translates to: PFYSISPGFPRSLTLPLKFTTKI*HHFDLI
Trigger: GATCAGATCAAAGTGGTGCAAGATCTTAGTGGTGAA...TTTGAGAGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS-3UTR CAA 90 bp CATATTCCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTCATATTCTCACTACATaGTCTTGTCCAGCTGAGGCA +
Preference number: 5 (lower is better)
Translates to: HIPFYSISPGFPRSLTLPHILTT*SCPAEA
Trigger: TGCCTCAGCTGGACAAGACAATGTAGTGAGAATATG...AGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGGAATATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS-3UTR CAA 90 bp CTAACCATCAACAACATGATCAGGGTTTCATTGCCCCAGATGTTATTTCATTGGTTTGCAAAATGGCCGTaGCCGAAAGGGTGCGTTTTT +
Preference number: 5 (lower is better)
Translates to: LTINNMIRVSLPQMLFHWFAKWP*PKGCVF
Trigger: AAAAACGCACCCTTTCGGCAACGGCCATTTTGCAAA...CCAATGAAATAACATCTGGGGCAATGAAACCCTGATCATGTTGTTGATGGTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
CDS-3UTR CAA 90 bp CCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTCTCAAAGTATGTCCTTTATATTaGCAAAATGGCCGTTGCCGA +
Preference number: 5 (lower is better)
Translates to: PFYSISPGFPRSLTLPLKVCPLY*QNGRCR
Trigger: TCGGCAACGGCCATTTTGCAAATATAAAGGACATAC...TTTGAGAGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS-3UTR CAA 90 bp CCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTCTCAAAAATACCTGTCATCTCTaGGATGAAAAGCTATGGCAG +
Preference number: 5 (lower is better)
Translates to: PFYSISPGFPRSLTLPLKNTCHL*DEKLWQ
Trigger: CTGCCATAGCTTTTCATCCAAGAGATGACAGGTATT...TTTGAGAGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371825.7
ENST00000371848.3
CDS-3UTR CAA 90 bp CCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTCTCAAAATTTTTCTTCCAACCTaGTTGCGCCCTCTAGTAGAT +
Preference number: 5 (lower is better)
Translates to: PFYSISPGFPRSLTLPLKIFLPT*LRPLVD
Trigger: ATCTACTAGAGGGCGCAACAAGGTTGGAAGAAAAAT...TTTGAGAGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS-3UTR CAA 90 bp CTAACCATCAACAACATGATCAGGGTTTCATTGCCCCAGATGTTATTTCATTGGTGGCTGAAACTTGCTTaGATCTGGCTGCTGCTATTG +
Preference number: 5 (lower is better)
Translates to: LTINNMIRVSLPQMLFHWWLKLA*IWLLLL
Trigger: CAATAGCAGCAGCCAGATCAAAGCAAGTTTCAGCCA...CCAATGAAATAACATCTGGGGCAATGAAACCCTGATCATGTTGTTGATGGTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254029.8
ENST00000371822.9
CDS-3UTR CAA 90 bp CCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTCTCAAAGATGTAACAACTGCATaGTGGGCTTTAATACCTTCC +
Preference number: 5 (lower is better)
Translates to: PFYSISPGFPRSLTLPLKDVTTA*WALIPS
Trigger: GGAAGGTATTAAAGCCCACAATGCAGTTGTTACATC...TTTGAGAGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS-3UTR CAA 90 bp CATATTCCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTGTGTTCTCTGTTTCCTaGAATGTTGAAAGCCCAACT +
Preference number: 5 (lower is better)
Translates to: HIPFYSISPGFPRSLTLPVFSVS*NVESPT
Trigger: AGTTGGGCTTTCAACATTCAAGGAAACAGAGAACAC...AGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGGAATATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254029.8
ENST00000371825.7
CDS-3UTR CAA 90 bp CCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTCTCAAAGACTCATTTCCAACTTaGTATGCAGTGTTCTCTGTT +
Preference number: 5 (lower is better)
Translates to: PFYSISPGFPRSLTLPLKDSFPT*YAVFSV
Trigger: AACAGAGAACACTGCATACAAAGTTGGAAATGAGTC...TTTGAGAGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254029.8
ENST00000371825.7
CDS-3UTR CAA 90 bp CCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTCTCAAAGAGAGTTCTTTTCCTTaGGAATCCAAAGAGTCATCT +
Preference number: 5 (lower is better)
Translates to: PFYSISPGFPRSLTLPLKESSFP*ESKESS
Trigger: AGATGACTCTTTGGATTCCAAAGGAAAAGAACTCTC...TTTGAGAGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
CDS-3UTR CAA 90 bp CCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTCTCAAAACTTCCACTGCTTCCTaGTTCAATACTTCTGTTTCA +
Preference number: 5 (lower is better)
Translates to: PFYSISPGFPRSLTLPLKTSTAS*FNTSVS
Trigger: TGAAACAGAAGTATTGAACAAGGAAGCAGTGGAAGT...TTTGAGAGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS-3UTR CAA 90 bp CATATTCCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTAAACCGTGTGCTGCTTaGAATTTAACTGGTCTTGTG +
Preference number: 5 (lower is better)
Translates to: HIPFYSISPGFPRSLTLPKPCAA*NLTGLV
Trigger: CACAAGACCAGTTAAATTCAAAGCAGCACACGGTTT...AGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGGAATATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS-3UTR CAA 90 bp CATATTCCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTTTCACCACTAAGATCTaGCACCACTTTGATCTGATC +
Preference number: 5 (lower is better)
Translates to: HIPFYSISPGFPRSLTLPFTTKI*HHFDLI
Trigger: GATCAGATCAAAGTGGTGCAAGATCTTAGTGGTGAA...AGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGGAATATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS-3UTR CAA 90 bp CTAACCATCAACAACATGATCAGGGTTTCATTGCCCCAGATGTTATTTCATTGGCATATTCTCACTACATaGTCTTGTCCAGCTGAGGCA +
Preference number: 5 (lower is better)
Translates to: LTINNMIRVSLPQMLFHWHILTT*SCPAEA
Trigger: TGCCTCAGCTGGACAAGACAATGTAGTGAGAATATG...CCAATGAAATAACATCTGGGGCAATGAAACCCTGATCATGTTGTTGATGGTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
CDS-3UTR CAA 90 bp CATATTCCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTGTATGTCCTTTATATTaGCAAAATGGCCGTTGCCGA +
Preference number: 5 (lower is better)
Translates to: HIPFYSISPGFPRSLTLPVCPLY*QNGRCR
Trigger: TCGGCAACGGCCATTTTGCAAATATAAAGGACATAC...AGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGGAATATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS-3UTR CAA 90 bp CATATTCCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTAATACCTGTCATCTCTaGGATGAAAAGCTATGGCAG +
Preference number: 5 (lower is better)
Translates to: HIPFYSISPGFPRSLTLPNTCHL*DEKLWQ
Trigger: CTGCCATAGCTTTTCATCCAAGAGATGACAGGTATT...AGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGGAATATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371825.7
ENST00000371848.3
CDS-3UTR CAA 90 bp CATATTCCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTATTTTTCTTCCAACCTaGTTGCGCCCTCTAGTAGAT +
Preference number: 5 (lower is better)
Translates to: HIPFYSISPGFPRSLTLPIFLPT*LRPLVD
Trigger: ATCTACTAGAGGGCGCAACAAGGTTGGAAGAAAAAT...AGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGGAATATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS-3UTR CAA 90 bp CATATTCCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTGATGTAACAACTGCATaGTGGGCTTTAATACCTTCC +
Preference number: 5 (lower is better)
Translates to: HIPFYSISPGFPRSLTLPDVTTA*WALIPS
Trigger: GGAAGGTATTAAAGCCCACAATGCAGTTGTTACATC...AGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGGAATATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS-3UTR CAA 90 bp CTAACCATCAACAACATGATCAGGGTTTCATTGCCCCAGATGTTATTTCATTGGACATCAAACTTGGGTTaGGTGCAAAGATGGCTGATG +
Preference number: 5 (lower is better)
Translates to: LTINNMIRVSLPQMLFHWTSNLG*VQRWLM
Trigger: CATCAGCCATCTTTGCACCAAACCCAAGTTTGATGT...CCAATGAAATAACATCTGGGGCAATGAAACCCTGATCATGTTGTTGATGGTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
CDS-3UTR CAA 90 bp CCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTCTCAAAAAGATAACATCAAACTaGGGTTTGGTGCAAAGATGG +
Preference number: 5 (lower is better)
Translates to: PFYSISPGFPRSLTLPLKKITSN*GLVQRW
Trigger: CCATCTTTGCACCAAACCCAAGTTTGATGTTATCTT...TTTGAGAGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS-3UTR CAA 90 bp CATATTCCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTCTTTACATAGAAACATaGTGCTCCAGTGTGGCAAAG +
Preference number: 5 (lower is better)
Translates to: HIPFYSISPGFPRSLTLPLYIET*CSSVAK
Trigger: CTTTGCCACACTGGAGCACAATGTTTCTATGTAAAG...AGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGGAATATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
CDS-3UTR CAA 90 bp CCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTCTCAAAATGATCAGGGTTTCATaGCCCCAGATGTTATTTCAT +
Preference number: 5 (lower is better)
Translates to: PFYSISPGFPRSLTLPLKMIRVS*PQMLFH
Trigger: ATGAAATAACATCTGGGGCAATGAAACCCTGATCAT...TTTGAGAGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
CDS-3UTR CAA 90 bp CCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTCTCAAAGGTATTTCAAATGTCTaGGATGAAAAGCTATGGCAG +
Preference number: 5 (lower is better)
Translates to: PFYSISPGFPRSLTLPLKGISNV*DEKLWQ
Trigger: CTGCCATAGCTTTTCATCCAAGACATTTGAAATACC...TTTGAGAGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371822.9
CDS TCA 90 bp ATATTGCTCAGATCTGTTCTAGCCACAATAGGACTGGCAGTAGCTTaGTCAGAGAGTTCTTTTCCTTTGGAATCCAAAGAGTCATCTTCA +
Preference number: 5 (lower is better)
Translates to: ILLRSVLATIGLAVA*SESSFPLESKESSS
Trigger: TGAAGATGACTCTTTGGATTCCAAAGGAAAAGAACTCTCTGATCAAGCTACTGCCAGTCCTATTGTGGCTAGAACAGATCTGAGCAATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000493448.1
CDS-3UTR CAA 90 bp CATATTCCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTATCTTGTTTCAATTCTaGTACAGGGGACTCATTTCC +
Preference number: 5 (lower is better)
Translates to: HIPFYSISPGFPRSLTLPILFQF*YRGLIS
Trigger: GGAAATGAGTCCCCTGTACAAGAATTGAAACAAGAT...AGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGGAATATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254029.8
ENST00000371825.7
CDS-3UTR CAA 90 bp CATATTCCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTACTTCCACTGCTTCCTaGTTCAATACTTCTGTTTCA +
Preference number: 5 (lower is better)
Translates to: HIPFYSISPGFPRSLTLPTSTAS*FNTSVS
Trigger: TGAAACAGAAGTATTGAACAAGGAAGCAGTGGAAGT...AGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGGAATATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS-3UTR CAA 90 bp CCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTCTCAAATTCCTTCATCATCACTaGATGAAGGATCATCTTGAT +
Preference number: 5 (lower is better)
Translates to: PFYSISPGFPRSLTLPLKFLHHH*MKDHLD
Trigger: ATCAAGATGATCCTTCATCAAGTGATGATGAAGGAA...TTTGAGAGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS-3UTR CAA 90 bp CTAACCATCAACAACATGATCAGGGTTTCATTGCCCCAGATGTTATTTCATTGGAAACCGTGTGCTGCTTaGAATTTAACTGGTCTTGTG +
Preference number: 5 (lower is better)
Translates to: LTINNMIRVSLPQMLFHWKPCAA*NLTGLV
Trigger: CACAAGACCAGTTAAATTCAAAGCAGCACACGGTTT...CCAATGAAATAACATCTGGGGCAATGAAACCCTGATCATGTTGTTGATGGTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
CDS-3UTR CAA 90 bp CTAACCATCAACAACATGATCAGGGTTTCATTGCCCCAGATGTTATTTCATTGGATTTTTCTTCCAACCTaGTTGCGCCCTCTAGTAGAT +
Preference number: 5 (lower is better)
Translates to: LTINNMIRVSLPQMLFHWIFLPT*LRPLVD
Trigger: ATCTACTAGAGGGCGCAACAAGGTTGGAAGAAAAAT...CCAATGAAATAACATCTGGGGCAATGAAACCCTGATCATGTTGTTGATGGTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
CDS-3UTR CAA 90 bp CATATTCCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTAAGATAACATCAAACTaGGGTTTGGTGCAAAGATGG +
Preference number: 5 (lower is better)
Translates to: HIPFYSISPGFPRSLTLPKITSN*GLVQRW
Trigger: CCATCTTTGCACCAAACCCAAGTTTGATGTTATCTT...AGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGGAATATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS-3UTR CAA 90 bp CATATTCCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTATGATCAGGGTTTCATaGCCCCAGATGTTATTTCAT +
Preference number: 5 (lower is better)
Translates to: HIPFYSISPGFPRSLTLPMIRVS*PQMLFH
Trigger: ATGAAATAACATCTGGGGCAATGAAACCCTGATCAT...AGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGGAATATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
CDS-3UTR CAA 90 bp CTAACCATCAACAACATGATCAGGGTTTCATTGCCCCAGATGTTATTTCATTGGATCTTGTTTCAATTCTaGTACAGGGGACTCATTTCC +
Preference number: 5 (lower is better)
Translates to: LTINNMIRVSLPQMLFHWILFQF*YRGLIS
Trigger: GGAAATGAGTCCCCTGTACAAGAATTGAAACAAGAT...CCAATGAAATAACATCTGGGGCAATGAAACCCTGATCATGTTGTTGATGGTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254029.8
ENST00000371825.7
CDS-3UTR CAA 90 bp CTAACCATCAACAACATGATCAGGGTTTCATTGCCCCAGATGTTATTTCATTGGGAGAGTTCTTTTCCTTaGGAATCCAAAGAGTCATCT +
Preference number: 5 (lower is better)
Translates to: LTINNMIRVSLPQMLFHWESSFP*ESKESS
Trigger: AGATGACTCTTTGGATTCCAAAGGAAAAGAACTCTC...CCAATGAAATAACATCTGGGGCAATGAAACCCTGATCATGTTGTTGATGGTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
CDS-3UTR CAA 90 bp CTAACCATCAACAACATGATCAGGGTTTCATTGCCCCAGATGTTATTTCATTGGACTTCCACTGCTTCCTaGTTCAATACTTCTGTTTCA +
Preference number: 5 (lower is better)
Translates to: LTINNMIRVSLPQMLFHWTSTAS*FNTSVS
Trigger: TGAAACAGAAGTATTGAACAAGGAAGCAGTGGAAGT...CCAATGAAATAACATCTGGGGCAATGAAACCCTGATCATGTTGTTGATGGTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
CDS-3UTR CAA 90 bp CATATTCCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTGACGTAATATTCTCTTaGGGAACATCTATATCAGGA +
Preference number: 5 (lower is better)
Translates to: HIPFYSISPGFPRSLTLPDVIFS*GTSISG
Trigger: TCCTGATATAGATGTTCCCAAAGAGAATATTACGTC...AGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGGAATATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS-3UTR CAA 90 bp CATATTCCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTTTCCTTCATCATCACTaGATGAAGGATCATCTTGAT +
Preference number: 5 (lower is better)
Translates to: HIPFYSISPGFPRSLTLPFLHHH*MKDHLD
Trigger: ATCAAGATGATCCTTCATCAAGTGATGATGAAGGAA...AGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGGAATATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS-3UTR CAA 90 bp CATATTCCTTTCTACTCTATCAGCCCAGGGTTTCCTAGATCATTAACACTGCCTACACGTCCTTCAGTATaGTATTTCATTCGCATATTG +
Preference number: 5 (lower is better)
Translates to: HIPFYSISPGFPRSLTLPTRPSV*YFIRIL
Trigger: CAATATGCGAATGAAATACAATACTGAAGGACGTGT...AGGCAGTGTTAATGATCTAGGAAACCCTGGGCTGATAGAGTAGAAAGGAATATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS-3UTR CAA 90 bp CTAACCATCAACAACATGATCAGGGTTTCATTGCCCCAGATGTTATTTCATTGGAAGATAACATCAAACTaGGGTTTGGTGCAAAGATGG +
Preference number: 5 (lower is better)
Translates to: LTINNMIRVSLPQMLFHWKITSN*GLVQRW
Trigger: CCATCTTTGCACCAAACCCAAGTTTGATGTTATCTT...CCAATGAAATAACATCTGGGGCAATGAAACCCTGATCATGTTGTTGATGGTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
CDS TCA 90 bp TCTGTTTCAGTTTCAAGCACATTAAGCTGCTCAGTTGAACTTGTTTaGGTTAACTTCGTGGTTTCATCTACTGGTTTCTCACAGGTTTCA +
Preference number: 5 (lower is better)
Translates to: SVSVSSTLSCSVELV*VNFVVSSTGFSQVS
Trigger: TGAAACCTGTGAGAAACCAGTAGATGAAACCACGAAGTTAACTCAAACAAGTTCAACTGAGCAGCTTAATGTGCTTGAAACTGAAACAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
ENST00000493448.1
CDS-3UTR CAA 90 bp CTAACCATCAACAACATGATCAGGGTTTCATTGCCCCAGATGTTATTTCATTGGGACGTAATATTCTCTTaGGGAACATCTATATCAGGA +
Preference number: 5 (lower is better)
Translates to: LTINNMIRVSLPQMLFHWDVIFS*GTSISG
Trigger: TCCTGATATAGATGTTCCCAAAGAGAATATTACGTC...CCAATGAAATAACATCTGGGGCAATGAAACCCTGATCATGTTGTTGATGGTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
CDS-3UTR CAA 90 bp CTAACCATCAACAACATGATCAGGGTTTCATTGCCCCAGATGTTATTTCATTGGACACGTCCTTCAGTATaGTATTTCATTCGCATATTG +
Preference number: 5 (lower is better)
Translates to: LTINNMIRVSLPQMLFHWTRPSV*YFIRIL
Trigger: CAATATGCGAATGAAATACAATACTGAAGGACGTGT...CCAATGAAATAACATCTGGGGCAATGAAACCCTGATCATGTTGTTGATGGTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
CDS GCA 90 bp CTCTGTATCATAGAAAATACATCTGCCATCATATGTCCCAATCACTaGATATTTGCCATTCTGACAGAAATTTGCAGCTGTGATCAATTT +
Preference number: 5 (lower is better)
Translates to: LCIIENTSAIICPNH*IFAILTEICSCDQF
Trigger: AAATTGATCACAGCTGCAAATTTCTGTCAGAATGGCAAATATGCAGTGATTGGGACATATGATGGCAGATGTATTTTCTATGATACAGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371825.7
ENST00000371848.3
CDS TCA 72 bp GAAAGGGGGCCGCCCTCAGTTGCCGGGCTTCGGGAATaGCCGGCAAAGCGGCCGCCTGAAGAGGCGGCGGTT +
Preference number: 6 (lower is better)
Translates to: ERGPPSVAGLRE*PAKRPPEEAAV
Trigger: AACCGCCGCCTCTTCAGGCGGCCGCTTTGCCGGTCATTCCCGAAGCCCGGCAACTGAGGGCGGCCCCCTTTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000493448.1
CDS CCA 72 bp TCCTCGTCGACCTCCACCCGGGCGAGACTGGGGAAGTaGGTCTCGGGCGAGGCTGAGGGAGCAGACGATCTG +
Preference number: 6 (lower is better)
Translates to: SSSTSTRARLGK*VSGEAEGADDL
Trigger: CAGATCGTCTGCTCCCTCAGCCTCGCCCGAGACCCACTTCCCCAGTCTCGCCCGGGTGGAGGTCGACGAGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000493448.1
CDS TCA 72 bp TGCCGGGCTTCGGGAATGACCGGCAAAGCGGCCGCCTaGAGAGGCGGCGGTTGGTCCAGGGAATGTTGCTGC +
Preference number: 6 (lower is better)
Translates to: CRASGMTGKAAA*RGGGWSRECCC
Trigger: GCAGCAACATTCCCTGGACCAACCGCCGCCTCTTCAGGCGGCCGCTTTGCCGGTCATTCCCGAAGCCCGGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000493448.1
CDS CAA 72 bp AATGACCGGCAAAGCGGCCGCCTGAAGAGGCGGCGGTaGGTCCAGGGAATGTTGCTGCCACCGCTCCCAGTG +
Preference number: 6 (lower is better)
Translates to: NDRQSGRLKRRR*VQGMLLPPLPV
Trigger: CACTGGGAGCGGTGGCAGCAACATTCCCTGGACCAACCGCCGCCTCTTCAGGCGGCCGCTTTGCCGGTCATT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000493448.1
CDS TCA 72 bp CCGGGCGAGACTGGGGAAGTGGGTCTCGGGCGAGGCTaGGGGAGCAGACGATCTGTAGCGAGGAGACTGTTA +
Preference number: 6 (lower is better)
Translates to: PGETGEVGLGRG*GSRRSVARRLL
Trigger: TAACAGTCTCCTCGCTACAGATCGTCTGCTCCCTCAGCCTCGCCCGAGACCCACTTCCCCAGTCTCGCCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000493448.1
CDS CAA 90 bp GGCTTCGGGAATGACCGGCAAAGCGGCCGCCTGAAGAGGCGGCGGTaGGTCCAGGGAATGTTGCTGCCACCGCTCCCAGTGATAGGTGTA +
Preference number: 6 (lower is better)
Translates to: GFGNDRQSGRLKRRR*VQGMLLPPLPVIGV
Trigger: TACACCTATCACTGGGAGCGGTGGCAGCAACATTCCCTGGACCAACCGCCGCCTCTTCAGGCGGCCGCTTTGCCGGTCATTCCCGAAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000493448.1
CDS GCA 72 bp CCGCAGCAGCAATTTACAGCAGCTGGAAGAGCTAGTTaGCCGCAAAATACCGACGCGCACCTACCCTCGCGA +
Preference number: 6 (lower is better)
Translates to: PQQQFTAAGRAS*PQNTDAHLPSR
Trigger: TCGCGAGGGTAGGTGCGCGTCGGTATTTTGCGGGCAACTAGCTCTTCCAGCTGCTGTAAATTGCTGCTGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371822.9
CDS CCA 72 bp ACTAGCCACTATATCAGGCTCTGGAGTAAGGTGTCTTaGGGGTTTGGCAGGGGCCACTTCTTCCACAGCGGC +
Preference number: 6 (lower is better)
Translates to: TSHYIRLWSKVS*GFGRGHFFHSG
Trigger: GCCGCTGTGGAAGAAGTGGCCCCTGCCAAACCCCCAAGACACCTTACTCCAGAGCCTGATATAGTGGCTAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
ENST00000493448.1
CDS CCA 72 bp TGGGGGTCTAGGAGGTGGGAAATTAGTTGGAGGAGGTaGGCGTGCTGGAACAGGCTTCTTTGTACTAGCCAC +
Preference number: 6 (lower is better)
Translates to: WGSRRWEISWRR*ACWNRLLCTSH
Trigger: GTGGCTAGTACAAAGAAGCCTGTTCCAGCACGCCCACCTCCTCCAACTAATTTCCCACCTCCTAGACCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
ENST00000493448.1
CDS TCA 72 bp TCAGTAAGCTCTCTCCCAGAGTTGGATCTAGGTCTCTaGGGGCCCATCACTTCACCTGCTACAGTCTGCCCA +
Preference number: 6 (lower is better)
Translates to: SVSSLPELDLGL*GPITSPATVCP
Trigger: TGGGCAGACTGTAGCAGGTGAAGTGATGGGCCCTCAGAGACCTAGATCCAACTCTGGGAGAGAGCTTACTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS CCA 72 bp AACAGGCTTCTTTGTACTAGCCACTATATCAGGCTCTaGAGTAAGGTGTCTTGGGGGTTTGGCAGGGGCCAC +
Preference number: 6 (lower is better)
Translates to: NRLLCTSHYIRL*SKVSWGFGRGH
Trigger: GTGGCCCCTGCCAAACCCCCAAGACACCTTACTCCAGAGCCTGATATAGTGGCTAGTACAAAGAAGCCTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
ENST00000493448.1
CDS GCA 72 bp GTTGGATCTAGGTCTCTGAGGGCCCATCACTTCACCTaGTACAGTCTGCCCATCAGGTGCTTTTCCATTTTC +
Preference number: 6 (lower is better)
Translates to: VGSRSLRAHHFT*YSLPIRCFSIF
Trigger: GAAAATGGAAAAGCACCTGATGGGCAGACTGTAGCAGGTGAAGTGATGGGCCCTCAGAGACCTAGATCCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS CCA 72 bp AGGAGGTGGGAAATTAGTTGGAGGAGGTGGGCGTGCTaGAACAGGCTTCTTTGTACTAGCCACTATATCAGG +
Preference number: 6 (lower is better)
Translates to: RRWEISWRRWAC*NRLLCTSHYIR
Trigger: CCTGATATAGTGGCTAGTACAAAGAAGCCTGTTCCAGCACGCCCACCTCCTCCAACTAATTTCCCACCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
ENST00000493448.1
CDS TCA 72 bp TCTCCACTGGTAGCACTTGCCAAATCAAGAGAAGGCTaGGAATCCTTAACCGTACTTTCTGAAGCCATGCTT +
Preference number: 6 (lower is better)
Translates to: SPLVALAKSREG*ESLTVLSEAML
Trigger: AAGCATGGCTTCAGAAAGTACGGTTAAGGATTCTCAGCCTTCTCTTGATTTGGCAAGTGCTACCAGTGGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS TCA 72 bp TTGTCTTGTCCAGCTGAGGCAAGTAATCGGCCACAGTaGGAAAATTTCATGGTCCAAACAGCTCCCATATGT +
Preference number: 6 (lower is better)
Translates to: LSCPAEASNRPQ*ENFMVQTAPIC
Trigger: ACATATGGGAGCTGTTTGGACCATGAAATTTTCTCACTGTGGCCGATTACTTGCCTCAGCTGGACAAGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS GCA 72 bp CTGGGCGGTAACTATTTTATCTCCACTGGTAGCACTTaGCAAATCAAGAGAAGGCTGAGAATCCTTAACCGT +
Preference number: 6 (lower is better)
Translates to: LGGNYFISTGST*QIKRRLRILNR
Trigger: ACGGTTAAGGATTCTCAGCCTTCTCTTGATTTGGCAAGTGCTACCAGTGGAGATAAAATAGTTACCGCCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS CCA 72 bp CTGCCTTTTGGGATTCTTCCGGTAGTACTTGATCTATaGCTAACAGTCCGGGTATATTGCTCAGATCTGTTC +
Preference number: 6 (lower is better)
Translates to: LPFGILPVVLDL*LTVRVYCSDLF
Trigger: GAACAGATCTGAGCAATATACCCGGACTGTTAGCCATAGATCAAGTACTACCGGAAGAATCCCAAAAGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000493448.1
CDS CAA 72 bp TCTGAGGACACAGGCTCTAAAACATCACCACCTCCTTaGACTTCCACTGCTTCCTTGTTCAATACTTCTGTT +
Preference number: 6 (lower is better)
Translates to: SEDTGSKTSPPP*TSTASLFNTSV
Trigger: AACAGAAGTATTGAACAAGGAAGCAGTGGAAGTCAAAGGAGGTGGTGATGTTTTAGAGCCTGTGTCCTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
ENST00000493448.1
CDS CAA 90 bp TTAGTTGAGTCGTTTTCTGTTTTAACCTTCCACCATCAGTATCTGTaGGCTGAGACTGTAACTTCTCTTCATCATCTGACTGTGCCGCGT +
Preference number: 6 (lower is better)
Translates to: LVESFSVLTFHHQYL*AETVTSLHHLTVPR
Trigger: ACGCGGCACAGTCAGATGATGAAGAGAAGTTACAGTCTCAGCCAACAGATACTGATGGTGGAAGGTTAAAACAGAAAACGACTCAACTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS CAA 90 bp ATCAAGGAGATCAGCAGTATGTCCTTTATATTTGCAAAATGGCCGTaGCCGAAAGGGTGCGTTTTTATCATCAGGGTCTTCATCAGTTCC +
Preference number: 6 (lower is better)
Translates to: IKEISSMSFIFAKWP*PKGCVFIIRVFISS
Trigger: GGAACTGATGAAGACCCTGATGATAAAAACGCACCCTTTCGGCAACGGCCATTTTGCAAATATAAAGGACATACTGCTGATCTCCTTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS TCA 72 bp AGATCTGTTCTAGCCACAATAGGACTGGCAGTAGCTTaGTCAGAGAGTTCTTTTCCTTTGGAATCCAAAGAG +
Preference number: 6 (lower is better)
Translates to: RSVLATIGLAVA*SESSFPLESKE
Trigger: CTCTTTGGATTCCAAAGGAAAAGAACTCTCTGATCAAGCTACTGCCAGTCCTATTGTGGCTAGAACAGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000493448.1
CDS TCA 72 bp TTCTGTTTTAACCTTCCACCATCAGTATCTGTTGGCTaGGACTGTAACTTCTCTTCATCATCTGACTGTGCC +
Preference number: 6 (lower is better)
Translates to: FCFNLPPSVSVG*DCNFSSSSDCA
Trigger: GGCACAGTCAGATGATGAAGAGAAGTTACAGTCTCAGCCAACAGATACTGATGGTGGAAGGTTAAAACAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS GCA 72 bp TCCTTTATATTTGCAAAATGGCCGTTGCCGAAAGGGTaGGTTTTTATCATCAGGGTCTTCATCAGTTCCACT +
Preference number: 6 (lower is better)
Translates to: SFIFAKWPLPKG*VFIIRVFISST
Trigger: AGTGGAACTGATGAAGACCCTGATGATAAAAACGCACCCTTTCGGCAACGGCCATTTTGCAAATATAAAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS GCA 72 bp TCAGCAGTATGTCCTTTATATTTGCAAAATGGCCGTTaGCGAAAGGGTGCGTTTTTATCATCAGGGTCTTCA +
Preference number: 6 (lower is better)
Translates to: SAVCPLYLQNGR*RKGAFLSSGSS
Trigger: TGAAGACCCTGATGATAAAAACGCACCCTTTCGGCAACGGCCATTTTGCAAATATAAAGGACATACTGCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS CAA 72 bp CAGATCTGTTCTAGCCACAATAGGACTGGCAGTAGCTaGATCAGAGAGTTCTTTTCCTTTGGAATCCAAAGA +
Preference number: 6 (lower is better)
Translates to: QICSSHNRTGSS*IREFFSFGIQR
Trigger: TCTTTGGATTCCAAAGGAAAAGAACTCTCTGATCAAGCTACTGCCAGTCCTATTGTGGCTAGAACAGATCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000493448.1
CDS CAA 72 bp GGTCCAAACAGCTCCCATATGTTCACCACTAAGATCTaGCACCACTTTGATCTGATCAAAATCATAAGGTCC +
Preference number: 6 (lower is better)
Translates to: GPNSSHMFTTKI*HHFDLIKIIRS
Trigger: GGACCTTATGATTTTGATCAGATCAAAGTGGTGCAAGATCTTAGTGGTGAACATATGGGAGCTGTTTGGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS CAA 72 bp ATCAGCAGTATGTCCTTTATATTTGCAAAATGGCCGTaGCCGAAAGGGTGCGTTTTTATCATCAGGGTCTTC +
Preference number: 6 (lower is better)
Translates to: ISSMSFIFAKWP*PKGCVFIIRVF
Trigger: GAAGACCCTGATGATAAAAACGCACCCTTTCGGCAACGGCCATTTTGCAAATATAAAGGACATACTGCTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS CAA 90 bp TTAGACCATGAAAGATCAAGGAGATCAGCAGTATGTCCTTTATATTaGCAAAATGGCCGTTGCCGAAAGGGTGCGTTTTTATCATCAGGG +
Preference number: 6 (lower is better)
Translates to: LDHERSRRSAVCPLY*QNGRCRKGAFLSSG
Trigger: CCCTGATGATAAAAACGCACCCTTTCGGCAACGGCCATTTTGCAAATATAAAGGACATACTGCTGATCTCCTTGATCTTTCATGGTCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS CAA 72 bp GAAAGATCAAGGAGATCAGCAGTATGTCCTTTATATTaGCAAAATGGCCGTTGCCGAAAGGGTGCGTTTTTA +
Preference number: 6 (lower is better)
Translates to: ERSRRSAVCPLY*QNGRCRKGAFL
Trigger: TAAAAACGCACCCTTTCGGCAACGGCCATTTTGCAAATATAAAGGACATACTGCTGATCTCCTTGATCTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS CAA 90 bp TATATTGCTCAGATCTGTTCTAGCCACAATAGGACTGGCAGTAGCTaGATCAGAGAGTTCTTTTCCTTTGGAATCCAAAGAGTCATCTTC +
Preference number: 6 (lower is better)
Translates to: YIAQICSSHNRTGSS*IREFFSFGIQRVIF
Trigger: GAAGATGACTCTTTGGATTCCAAAGGAAAAGAACTCTCTGATCAAGCTACTGCCAGTCCTATTGTGGCTAGAACAGATCTGAGCAATATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000493448.1
CDS CAA 90 bp TTTTCTTCCAACCTTGTTGCGCCCTCTAGTAGATCGGACATGTATTaGTGTATGGTATTTCAAATGTCTTGGATGAAAAGCTATGGCAGT +
Preference number: 6 (lower is better)
Translates to: FSSNLVAPSSRSDMY*CMVFQMSWMKSYGS
Trigger: ACTGCCATAGCTTTTCATCCAAGACATTTGAAATACCATACACAAATACATGTCCGATCTACTAGAGGGCGCAACAAGGTTGGAAGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371822.9
CDS CAA 72 bp TCGTTTTCTGTTTTAACCTTCCACCATCAGTATCTGTaGGCTGAGACTGTAACTTCTCTTCATCATCTGACT +
Preference number: 6 (lower is better)
Translates to: SFSVLTFHHQYL*AETVTSLHHLT
Trigger: AGTCAGATGATGAAGAGAAGTTACAGTCTCAGCCAACAGATACTGATGGTGGAAGGTTAAAACAGAAAACGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
CDS TCA 72 bp GTTTCAAGCACATTAAGCTGCTCAGTTGAACTTGTTTaGGTTAACTTCGTGGTTTCATCTACTGGTTTCTCA +
Preference number: 6 (lower is better)
Translates to: VSSTLSCSVELV*VNFVVSSTGFS
Trigger: TGAGAAACCAGTAGATGAAACCACGAAGTTAACTCAAACAAGTTCAACTGAGCAGCTTAATGTGCTTGAAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
ENST00000493448.1
CDS CAA 72 bp AAAACATCACCACCTCCTTTGACTTCCACTGCTTCCTaGTTCAATACTTCTGTTTCAGTTTCAAGCACATTA +
Preference number: 6 (lower is better)
Translates to: KTSPPPLTSTAS*FNTSVSVSSTL
Trigger: TAATGTGCTTGAAACTGAAACAGAAGTATTGAACAAGGAAGCAGTGGAAGTCAAAGGAGGTGGTGATGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371825.7
ENST00000371848.3
ENST00000493448.1
CDS CAA 90 bp TTTTCTTCCAACCTTGTTGCGCCCTCTAGTAGATCGGACATGTATTaGTGTATGGTATTTCAAATGCTCTGTATCATAGAAAATACATCT +
Preference number: 6 (lower is better)
Translates to: FSSNLVAPSSRSDMY*CMVFQMLCIIENTS
Trigger: AGATGTATTTTCTATGATACAGAGCATTTGAAATACCATACACAAATACATGTCCGATCTACTAGAGGGCGCAACAAGGTTGGAAGAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371825.7
ENST00000371848.3
CDS TCA 72 bp ATGGTAGGTACTCCAGATATAAACATACTTATCTTCTaGACCACTAACGAGGTAAGTAAAATCATGGCTGAA +
Preference number: 6 (lower is better)
Translates to: MVGTPDINILIF*TTNEVSKIMAE
Trigger: TTCAGCCATGATTTTACTTACCTCGTTAGTGGTTCAGAAGATAAGTATGTTTATATCTGGAGTACCTACCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254029.8
ENST00000371822.9
ENST00000371848.3