Pregenerated sensors for WDR4 (Homo sapiens)
Ensembl gene IDs: ENSG00000160193Ensembl transcript IDs: ENST00000330317.6, ENST00000398208.3, ENST00000470658.1, ENST00000476326.5, ENST00000492742.5
Found 97 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGCGGACACGAAGGGCGGTATGAGAACAGGAGAAACACAGACAGCTaGCGCCACCACCGGCTCACACGCAGCCTCCGACATGAAAAGAAA | + |
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Preference number: 1 (lower is better) Translates to: SGHEGRYENRRNTDS*RHHRLTRSLRHEKK Trigger: TTTCTTTTCATGTCGGAGGCTGCGTGTGAGCCGGTGGTGGCGGCAGCTGTCTGTGTTTCTCCTGTTCTCATACCGCCCTTCGTGTCCGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398208.3 |
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| 3UTR GCA 90 bp | CCACCATGCCAGAAACGTCAGCCCACAGATGCTCCTAGAGGAAGATaGAGCGGACACGAAGGGCGGTATGAGAACAGGAGAAACACAGAC | + |
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Preference number: 1 (lower is better) Translates to: PPCQKRQPTDAPRGR*SGHEGRYENRRNTD Trigger: GTCTGTGTTTCTCCTGTTCTCATACCGCCCTTCGTGTCCGCTGCATCTTCCTCTAGGAGCATCTGTGGGCTGACGTTTCTGGCATGGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398208.3 |
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| 3UTR-3UTR CCA 90 bp | GTTTCTCACTTCCCACAAGGGAGCCACTCTCCAGGAGCAGCTCCTGAGCACAAGCCCCATCCTCTGAGCTaGTCACAACTGATGTCACCT | + |
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Preference number: 2 (lower is better) Translates to: VSHFPQGSHSPGAAPEHKPHPLS*SQLMSP Trigger: AGGTGACATCAGTTGTGACCAGCTCAGAGGATGGGG...CTTGTGCTCAGGAGCTGCTCCTGGAGAGTGGCTCCCTTGTGGGAAGTGAGAAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398208.3 |
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| 3UTR-3UTR TCA 90 bp | GTTTCTCACTTCCCACAAGGGAGCCACTCTCCAGGAGCAGCTCCTGAGCACAAGTTTCCTAATTTGAGGTaGGAGACACCACTGACCGCC | + |
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Preference number: 2 (lower is better) Translates to: VSHFPQGSHSPGAAPEHKFPNLR*ETPLTA Trigger: GGCGGTCAGTGGTGTCTCTCACCTCAAATTAGGAAA...CTTGTGCTCAGGAGCTGCTCCTGGAGAGTGGCTCCCTTGTGGGAAGTGAGAAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398208.3 |
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| 3UTR-3UTR TCA 90 bp | GTCAGCCCACAGATGCTCCTAGAGGAAGATGCAGCGGACACGAAGGGCGGTATGACGCAGCCTCCGACATaGAAAGAAAGTGCTTCAAGA | + |
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Preference number: 2 (lower is better) Translates to: VSPQMLLEEDAADTKGGMTQPPT*KESASR Trigger: TCTTGAAGCACTTTCTTTTCATGTCGGAGGCTGCGT...CATACCGCCCTTCGTGTCCGCTGCATCTTCCTCTAGGAGCATCTGTGGGCTGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398208.3 |
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| 3UTR GCA 72 bp | GAAGGGCGGTATGAGAACAGGAGAAACACAGACAGCTaGCGCCACCACCGGCTCACACGCAGCCTCCGACAT | + |
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Preference number: 3 (lower is better) Translates to: EGRYENRRNTDS*RHHRLTRSLRH Trigger: ATGTCGGAGGCTGCGTGTGAGCCGGTGGTGGCGGCAGCTGTCTGTGTTTCTCCTGTTCTCATACCGCCCTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398208.3 |
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| 3UTR TCA 72 bp | CTGCCGCCACCACCGGCTCACACGCAGCCTCCGACATaGAAAGAAAGTGCTTCAAGAGCTTCCACTCCACTG | + |
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Preference number: 3 (lower is better) Translates to: LPPPPAHTQPPT*KESASRASTPL Trigger: CAGTGGAGTGGAAGCTCTTGAAGCACTTTCTTTTCATGTCGGAGGCTGCGTGTGAGCCGGTGGTGGCGGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398208.3 |
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| 3UTR GCA 72 bp | CAGAAACGTCAGCCCACAGATGCTCCTAGAGGAAGATaGAGCGGACACGAAGGGCGGTATGAGAACAGGAGA | + |
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Preference number: 3 (lower is better) Translates to: QKRQPTDAPRGR*SGHEGRYENRR Trigger: TCTCCTGTTCTCATACCGCCCTTCGTGTCCGCTGCATCTTCCTCTAGGAGCATCTGTGGGCTGACGTTTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398208.3 |
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| 3UTR CCA 72 bp | GCAGAGGACAAATCACAGATGCTCCTCGACTTACGATaGAGCTACATCCGAACAAGCTCATCGTCGGCCGAC | + |
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Preference number: 3 (lower is better) Translates to: AEDKSQMLLDLR*SYIRTSSSSAD Trigger: GTCGGCCGACGATGAGCTTGTTCGGATGTAGCTCCATCGTAAGTCGAGGAGCATCTGTGATTTGTCCTCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330317.6 |
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| 3UTR TCA 72 bp | CCTAGGAAGTTGAGAAGGTTCATCCTTGCTGATCGGTaGTTGAAATTCAGCAACATCCCTGTGGCTCTGCAG | + |
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Preference number: 3 (lower is better) Translates to: PRKLRRFILADR*LKFSNIPVALQ Trigger: CTGCAGAGCCACAGGGATGTTGCTGAATTTCAATCACCGATCAGCAAGGATGAACCTTCTCAACTTCCTAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398208.3 |
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| 3UTR GCA 72 bp | AAAAACATATCCCATAAGCAGAGGACAAATCACAGATaGTCCTCGACTTACGATGGAGCTACATCCGAACAA | + |
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Preference number: 3 (lower is better) Translates to: KNISHKQRTNHR*SSTYDGATSEQ Trigger: TTGTTCGGATGTAGCTCCATCGTAAGTCGAGGAGCATCTGTGATTTGTCCTCTGCTTATGGGATATGTTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000330317.6 |
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| CDS-3UTR TCA 90 bp | ACAGCTGCCGCCACCACCGGCTCACACGCAGCCTCCGACATGAAAAGAAAGTGCGCGCCGCGGCCCAGCTaGCTCGGATCTTCTCGTCCC | + |
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Preference number: 4 (lower is better) Translates to: TAAATTGSHAASDMKRKCAPRPS*LGSSRP Trigger: GGGACGAGAAGATCCGAGTCAGCTGGGCCGCGGCGC...GCACTTTCTTTTCATGTCGGAGGCTGCGTGTGAGCCGGTGGTGGCGGCAGCTGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398208.3 |
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| CDS-3UTR CCA 90 bp | CGGCCGACAGATCGCACGCAAGTGGTCCACGGATCGCACATAAGTGGTCCACAGGACGCGGCAAACTTCTaGGGGGCCTGGGGGTCCACC | + |
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Preference number: 4 (lower is better) Translates to: RPTDRTQVVHGSHISGPQDAANF*GAWGST Trigger: GGTGGACCCCCAGGCCCCCCAGAAGTTTGCCGCGTC...CTGTGGACCACTTATGTGCGATCCGTGGACCACTTGCGTGCGATCTGTCGGCCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000330317.6 |
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| CDS-3UTR GCA 90 bp | GTCAGCCCACAGATGCTCCTAGAGGAAGATGCAGCGGACACGAAGGGCGGTATGTGGCCAGGAATCGGCTaGCGCCCCGCACCACCAACG | + |
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Preference number: 4 (lower is better) Translates to: VSPQMLLEEDAADTKGGMWPGIG*RPAPPT Trigger: CGTTGGTGGTGCGGGGCGGCAGCCGATTCCTGGCCA...CATACCGCCCTTCGTGTCCGCTGCATCTTCCTCTAGGAGCATCTGTGGGCTGAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398208.3 |
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| CDS-3UTR CCA 90 bp | CAGCCCACAGATGCTCCTAGAGGAAGATGCAGCGGACACGAAGGGCGGTATGAGATCGCACCGCTCCCCTaGTCCAAGGGCGCGTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: QPTDAPRGRCSGHEGRYEIAPLP*SKGASS Trigger: GGAGGACGCGCCCTTGGACCAGGGGAGCGGTGCGAT...CTCATACCGCCCTTCGTGTCCGCTGCATCTTCCTCTAGGAGCATCTGTGGGCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398208.3 |
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| CDS-3UTR CCA 90 bp | CGGCCGACAGATCGCACGCAAGTGGTCCACGGATCGCACATAAGTGGTCCACAGAAGGACTCGATGCTATaGGGCGCCGCGGCCCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: RPTDRTQVVHGSHISGPQKDSML*GAAAQL Trigger: CAGCTGGGCCGCGGCGCCCCATAGCATCGAGTCCTT...CTGTGGACCACTTATGTGCGATCCGTGGACCACTTGCGTGCGATCTGTCGGCCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330317.6 |
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| CDS-3UTR CCA 90 bp | ACAGCTGCCGCCACCACCGGCTCACACGCAGCCTCCGACATGAAAAGAAAGTGCCACAAGGGCTACGGCTaGGGCTGGGGCAGGCTCAAG | + |
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Preference number: 4 (lower is better) Translates to: TAAATTGSHAASDMKRKCHKGYG*GWGRLK Trigger: CTTGAGCCTGCCCCAGCCCCAGCCGTAGCCCTTGTG...GCACTTTCTTTTCATGTCGGAGGCTGCGTGTGAGCCGGTGGTGGCGGCAGCTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398208.3 |
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| CDS-3UTR TCA 90 bp | AGATGCTCCTCGACTTACGATGGAGCTACATCCGAACAAGCTCATCGTCGGCCGGCGCCGCGGCCCAGCTaGCTCGGATCTTCTCGTCCC | + |
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Preference number: 4 (lower is better) Translates to: RCSSTYDGATSEQAHRRPAPRPS*LGSSRP Trigger: GGGACGAGAAGATCCGAGTCAGCTGGGCCGCGGCGC...CGGCCGACGATGAGCTTGTTCGGATGTAGCTCCATCGTAAGTCGAGGAGCATCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330317.6 |
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| CDS-3UTR CCA 90 bp | CACCATGCCAGAAACGTCAGCCCACAGATGCTCCTAGAGGAAGATGCAGCGGACGACGCGGCAAACTTCTaGGGGGCCTGGGGGTCCACC | + |
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Preference number: 4 (lower is better) Translates to: HHARNVSPQMLLEEDAADDAANF*GAWGST Trigger: GGTGGACCCCCAGGCCCCCCAGAAGTTTGCCGCGTC...GTCCGCTGCATCTTCCTCTAGGAGCATCTGTGGGCTGACGTTTCTGGCATGGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000398208.3 |
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| CDS-3UTR GCA 90 bp | CACCATGCCAGAAACGTCAGCCCACAGATGCTCCTAGAGGAAGATGCAGCGGACCTCATCTTCTTGGCATaGCCGTCGGGCCCAGGCGGG | + |
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Preference number: 4 (lower is better) Translates to: HHARNVSPQMLLEEDAADLIFLA*PSGPGG Trigger: CCCGCCTGGGCCCGACGGGCATGCCAAGAAGATGAG...GTCCGCTGCATCTTCCTCTAGGAGCATCTGTGGGCTGACGTTTCTGGCATGGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398208.3 |
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| CDS-3UTR CCA 90 bp | AGTGGTCCACGGATCGCACATAAGTGGTCCACAGTCGACAGAAACAGACCGCCAATCGCACCGCTCCCCTaGTCCAAGGGCGCGTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: SGPRIAHKWSTVDRNRPPIAPLP*SKGASS Trigger: GGAGGACGCGCCCTTGGACCAGGGGAGCGGTGCGAT...TGGCGGTCTGTTTCTGTCGACTGTGGACCACTTATGTGCGATCCGTGGACCACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330317.6 |
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| CDS-3UTR CCA 90 bp | AACAAGCTCATCGTCGGCCGACAGATCGCACGCAAGTGGTCCACGGATCGCACACAGCCCGGGCTGAGTTaGCACCACGGAGATACGGCT | + |
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Preference number: 4 (lower is better) Translates to: NKLIVGRQIARKWSTDRTQPGLS*HHGDTA Trigger: AGCCGTATCTCCGTGGTGCCAACTCAGCCCGGGCTG...TGTGCGATCCGTGGACCACTTGCGTGCGATCTGTCGGCCGACGATGAGCTTGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330317.6 |
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| CDS-3UTR CCA 90 bp | AACAAGCTCATCGTCGGCCGACAGATCGCACGCAAGTGGTCCACGGATCGCACAGCCACGTCCCACACTTaGTGCTGGAACGCCAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: NKLIVGRQIARKWSTDRTATSHT*CWNASC Trigger: GCAGCTGGCGTTCCAGCACCAAGTGTGGGACGTGGC...TGTGCGATCCGTGGACCACTTGCGTGCGATCTGTCGGCCGACGATGAGCTTGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330317.6 |
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| CDS-3UTR GCA 90 bp | ACAGCTGCCGCCACCACCGGCTCACACGCAGCCTCCGACATGAAAAGAAAGTGCACACCAACTGCTGTCTaGGGGCGTCCAGCTGGAAGA | + |
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Preference number: 4 (lower is better) Translates to: TAAATTGSHAASDMKRKCTPTAV*GRPAGR Trigger: TCTTCCAGCTGGACGCCCGCAGACAGCAGTTGGTGT...GCACTTTCTTTTCATGTCGGAGGCTGCGTGTGAGCCGGTGGTGGCGGCAGCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398208.3 |
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| CDS-3UTR GCA 90 bp | GTCAGCCCACAGATGCTCCTAGAGGAAGATGCAGCGGACACGAAGGGCGGTATGTGCCTGTACACCAACTaGTGTCTGCGGGCGTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: VSPQMLLEEDAADTKGGMCLYTN*CLRASS Trigger: GCTGGACGCCCGCAGACAGCAGTTGGTGTACAGGCA...CATACCGCCCTTCGTGTCCGCTGCATCTTCCTCTAGGAGCATCTGTGGGCTGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398208.3 |
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| CDS-3UTR CCA 90 bp | TACTGCGGGACAGCACGTCACCTGGATGCTGAGACGGCGGAACAACATGAAAACGGCTACGGCTGGGGCTaGGGCAGGCTCAAGCATTCG | + |
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Preference number: 4 (lower is better) Translates to: YCGTARHLDAETAEQHENGYGWG*GRLKHS Trigger: CGAATGCTTGAGCCTGCCCCAGCCCCAGCCGTAGCC...GTTTTCATGTTGTTCCGCCGTCTCAGCATCCAGGTGACGTGCTGTCCCGCAGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398208.3 |
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| CDS-3UTR TCA 90 bp | CGAACAAGCTCATCGTCGGCCGACAGATCGCACGCAAGTGGTCCACGGATCGCATCTCCTCCGAGGCTATaGAAGTCAGGGCTGTACACC | + |
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Preference number: 4 (lower is better) Translates to: RTSSSSADRSHASGPRIASPPRL*KSGLYT Trigger: GGTGTACAGCCCTGACTTTCATAGCCTCGGAGGAGA...TGCGATCCGTGGACCACTTGCGTGCGATCTGTCGGCCGACGATGAGCTTGTTCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330317.6 |
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| CDS-3UTR GCA 90 bp | CCGACAGATCGCACGCAAGTGGTCCACGGATCGCACATAAGTGGTCCACAGTCGACACCAACTGCTGTCTaGGGGCGTCCAGCTGGAAGA | + |
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Preference number: 4 (lower is better) Translates to: PTDRTQVVHGSHISGPQSTPTAV*GRPAGR Trigger: TCTTCCAGCTGGACGCCCGCAGACAGCAGTTGGTGT...CGACTGTGGACCACTTATGTGCGATCCGTGGACCACTTGCGTGCGATCTGTCGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330317.6 |
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| CDS-3UTR GCA 90 bp | CACCATGCCAGAAACGTCAGCCCACAGATGCTCCTAGAGGAAGATGCAGCGGACACGTCCCACACTTGGTaGTGGAACGCCAGCTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: HHARNVSPQMLLEEDAADTSHTW*WNASCC Trigger: GCAGCAGCTGGCGTTCCAGCACCAAGTGTGGGACGT...GTCCGCTGCATCTTCCTCTAGGAGCATCTGTGGGCTGACGTTTCTGGCATGGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398208.3 |
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| CDS-3UTR CCA 90 bp | CACCATGCCAGAAACGTCAGCCCACAGATGCTCCTAGAGGAAGATGCAGCGGACTGCTTGCTATGGAGGTaGCCAGGAATCGGCTGCCGC | + |
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Preference number: 4 (lower is better) Translates to: HHARNVSPQMLLEEDAADCLLWR*PGIGCR Trigger: GCGGCAGCCGATTCCTGGCCACCTCCATAGCAAGCA...GTCCGCTGCATCTTCCTCTAGGAGCATCTGTGGGCTGACGTTTCTGGCATGGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398208.3 |
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| CDS-3UTR CCA 90 bp | TACTGCGGGACAGCACGTCACCTGGATGCTGAGACGGCGGAACAACATGAAAACCAGCCCGGGCTGAGTTaGCACCACGGAGATACGGCT | + |
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Preference number: 4 (lower is better) Translates to: YCGTARHLDAETAEQHENQPGLS*HHGDTA Trigger: AGCCGTATCTCCGTGGTGCCAACTCAGCCCGGGCTG...GTTTTCATGTTGTTCCGCCGTCTCAGCATCCAGGTGACGTGCTGTCCCGCAGTA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398208.3 |
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| CDS-3UTR CCA 90 bp | TACTGCGGGACAGCACGTCACCTGGATGCTGAGACGGCGGAACAACATGAAAACGCCACGTCCCACACTTaGTGCTGGAACGCCAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: YCGTARHLDAETAEQHENATSHT*CWNASC Trigger: GCAGCTGGCGTTCCAGCACCAAGTGTGGGACGTGGC...GTTTTCATGTTGTTCCGCCGTCTCAGCATCCAGGTGACGTGCTGTCCCGCAGTA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398208.3 |
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| CDS-3UTR GCA 90 bp | CAGATGCTCCTCGACTTACGATGGAGCTACATCCGAACAAGCTCATCGTCGGCCACGTCCCACACTTGGTaGTGGAACGCCAGCTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: QMLLDLRWSYIRTSSSSATSHTW*WNASCC Trigger: GCAGCAGCTGGCGTTCCAGCACCAAGTGTGGGACGT...GGCCGACGATGAGCTTGTTCGGATGTAGCTCCATCGTAAGTCGAGGAGCATCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330317.6 |
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| CDS-3UTR GCA 90 bp | TACTGCGGGACAGCACGTCACCTGGATGCTGAGACGGCGGAACAACATGAAAACCTCTCAGGAACAGACTaGCACTGGTCGCCCACAGGC | + |
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Preference number: 4 (lower is better) Translates to: YCGTARHLDAETAEQHENLSGTD*HWSPTG Trigger: GCCTGTGGGCGACCAGTGGCAGTCTGTTCCTGAGAG...GTTTTCATGTTGTTCCGCCGTCTCAGCATCCAGGTGACGTGCTGTCCCGCAGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398208.3 |
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| CDS-3UTR GCA 90 bp | TACTGCGGGACAGCACGTCACCTGGATGCTGAGACGGCGGAACAACATGAAAACGCTCCTAGAGGAAGATaGAGCGGACACGAAGGGCGG | + |
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Preference number: 4 (lower is better) Translates to: YCGTARHLDAETAEQHENAPRGR*SGHEGR Trigger: CCGCCCTTCGTGTCCGCTGCATCTTCCTCTAGGAGC...GTTTTCATGTTGTTCCGCCGTCTCAGCATCCAGGTGACGTGCTGTCCCGCAGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398208.3 |
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| CDS-3UTR TCA 90 bp | CACCATGCCAGAAACGTCAGCCCACAGATGCTCCTAGAGGAAGATGCAGCGGACTCTCCTCCGAGGCTATaGAAGTCAGGGCTGTACACC | + |
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Preference number: 4 (lower is better) Translates to: HHARNVSPQMLLEEDAADSPPRL*KSGLYT Trigger: GGTGTACAGCCCTGACTTTCATAGCCTCGGAGGAGA...GTCCGCTGCATCTTCCTCTAGGAGCATCTGTGGGCTGACGTTTCTGGCATGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398208.3 |
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| CDS-3UTR GCA 90 bp | GTTTCTCACTTCCCACAAGGGAGCCACTCTCCAGGAGCAGCTCCTGAGCACAAGTGGAACGCCAGCTGCTaGCTGTACACCAACTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: VSHFPQGSHSPGAAPEHKWNASC*LYTNCC Trigger: ACAGCAGTTGGTGTACAGGCAGCAGCTGGCGTTCCA...CTTGTGCTCAGGAGCTGCTCCTGGAGAGTGGCTCCCTTGTGGGAAGTGAGAAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398208.3 |
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| CDS-3UTR TCA 90 bp | AGCTGCCGCCACCACCGGCTCACACGCAGCCTCCGACATGAAAAGAAAGTGCTTTTTCCTAATTTGAGGTaGGAGACACCACTGACCGCC | + |
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Preference number: 4 (lower is better) Translates to: SCRHHRLTRSLRHEKKVLFPNLR*ETPLTA Trigger: GGCGGTCAGTGGTGTCTCTCACCTCAAATTAGGAAA...AAGCACTTTCTTTTCATGTCGGAGGCTGCGTGTGAGCCGGTGGTGGCGGCAGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000398208.3 |
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| CDS-3UTR TCA 90 bp | AAATCAAATCATAACGACGTCCTCAATCACCTCCCTGTAAACCGGGTGCCAGCCTCCAGGAGCAGCTCCTaGGCACAAGGGCTACGGCTG | + |
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Preference number: 4 (lower is better) Translates to: KSNHNDVLNHLPVNRVPASRSSS*AQGLRL Trigger: CAGCCGTAGCCCTTGTGCTCAGGAGCTGCTCCTGGA...GGCTGGCACCCGGTTTACAGGGAGGTGATTGAGGACGTCGTTATGATTTGATTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398208.3 |
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| CDS-3UTR GCA 90 bp | GTCAGCCCACAGATGCTCCTAGAGGAAGATGCAGCGGACACGAAGGGCGGTATGGTCATCATCACTGCTTaGTATGGAGGTGGCCAGGAA | + |
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Preference number: 4 (lower is better) Translates to: VSPQMLLEEDAADTKGGMVIITA*YGGGQE Trigger: TTCCTGGCCACCTCCATAGCAAGCAGTGATGATGAC...CATACCGCCCTTCGTGTCCGCTGCATCTTCCTCTAGGAGCATCTGTGGGCTGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398208.3 |
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| CDS-3UTR GCA 90 bp | TACTGCGGGACAGCACGTCACCTGGATGCTGAGACGGCGGAACAACATGAAAACAACAGCATAGACAGGTaGCCCAGCTCTAGACGGCCA | + |
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Preference number: 4 (lower is better) Translates to: YCGTARHLDAETAEQHENNSIDR*PSSRRP Trigger: TGGCCGTCTAGAGCTGGGGCACCTGTCTATGCTGTT...GTTTTCATGTTGTTCCGCCGTCTCAGCATCCAGGTGACGTGCTGTCCCGCAGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398208.3 |
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| CDS-3UTR GCA 90 bp | GTTTCTCACTTCCCACAAGGGAGCCACTCTCCAGGAGCAGCTCCTGAGCACAAGCAAGTTCACCATCTGTaGCACCGATGCCAGACAGAG | + |
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Preference number: 4 (lower is better) Translates to: VSHFPQGSHSPGAAPEHKQVHHL*HRCQTE Trigger: CTCTGTCTGGCATCGGTGGCACAGATGGTGAACTTG...CTTGTGCTCAGGAGCTGCTCCTGGAGAGTGGCTCCCTTGTGGGAAGTGAGAAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398208.3 |
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| CDS-3UTR TCA 90 bp | CAGCCCACAGATGCTCCTAGAGGAAGATGCAGCGGACACGAAGGGCGGTATGAGACGCAGCCTCCGACATaGAAAGAAAGTGCTTCAAGA | + |
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Preference number: 4 (lower is better) Translates to: QPTDAPRGRCSGHEGRYETQPPT*KESASR Trigger: TCTTGAAGCACTTTCTTTTCATGTCGGAGGCTGCGT...CTCATACCGCCCTTCGTGTCCGCTGCATCTTCCTCTAGGAGCATCTGTGGGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398208.3 |
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| CDS-3UTR GCA 90 bp | ACAGATCGCACGCAAGTGGTCCACGGATCGCACATAAGTGGTCCACAGTCGACAGGCTGTCATCATCACTaGTTGCTATGGAGGTGGCCA | + |
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Preference number: 4 (lower is better) Translates to: TDRTQVVHGSHISGPQSTGCHHH*LLWRWP Trigger: TGGCCACCTCCATAGCAAGCAGTGATGATGACAGCC...TGTCGACTGTGGACCACTTATGTGCGATCCGTGGACCACTTGCGTGCGATCTGT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330317.6 |
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| CDS-3UTR GCA 90 bp | AGAGGAAGATGCAGCGGACACGAAGGGCGGTATGAGAACAGGAGAAACACAGACTGCCAGCCAGGCCCGTaGTCACACTTCCTGAAACAA | + |
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Preference number: 4 (lower is better) Translates to: RGRCSGHEGRYENRRNTDCQPGP*SHFLKQ Trigger: TTGTTTCAGGAAGTGTGAGCACGGGCCTGGCTGGCA...GTCTGTGTTTCTCCTGTTCTCATACCGCCCTTCGTGTCCGCTGCATCTTCCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398208.3 |
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| CDS-3UTR GCA 90 bp | TACTGCGGGACAGCACGTCACCTGGATGCTGAGACGGCGGAACAACATGAAAACACATCCCTGTGGCTCTaGAGTGTGTGCCAAGGTCAA | + |
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Preference number: 4 (lower is better) Translates to: YCGTARHLDAETAEQHENTSLWL*SVCQGQ Trigger: TTGACCTTGGCACACACTGCAGAGCCACAGGGATGT...GTTTTCATGTTGTTCCGCCGTCTCAGCATCCAGGTGACGTGCTGTCCCGCAGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398208.3 |
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| CDS-3UTR CCA 90 bp | AAATCAAATCATAACGACGTCCTCAATCACCTCCCTGTAAACCGGGTGCCAGCCGGACAGCACGTCACCTaGATGCTGAGACGGCGGAAC | + |
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Preference number: 4 (lower is better) Translates to: KSNHNDVLNHLPVNRVPAGQHVT*MLRRRN Trigger: GTTCCGCCGTCTCAGCATCCAGGTGACGTGCTGTCC...GGCTGGCACCCGGTTTACAGGGAGGTGATTGAGGACGTCGTTATGATTTGATTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398208.3 |
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| CDS-3UTR TCA 90 bp | TACTGCGGGACAGCACGTCACCTGGATGCTGAGACGGCGGAACAACATGAAAACACACGAAGGGCGGTATaGGAACAGGAGAAACACAGA | + |
|
Preference number: 4 (lower is better) Translates to: YCGTARHLDAETAEQHENTRRAV*EQEKHR Trigger: TCTGTGTTTCTCCTGTTCTCATACCGCCCTTCGTGT...GTTTTCATGTTGTTCCGCCGTCTCAGCATCCAGGTGACGTGCTGTCCCGCAGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398208.3 |
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| CDS-3UTR TCA 90 bp | GTCAGCCCACAGATGCTCCTAGAGGAAGATGCAGCGGACACGAAGGGCGGTATGTTGCTGATCGGTGATTaGAATTCAGCAACATCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: VSPQMLLEEDAADTKGGMLLIGD*NSATSL Trigger: CAGGGATGTTGCTGAATTTCAATCACCGATCAGCAA...CATACCGCCCTTCGTGTCCGCTGCATCTTCCTCTAGGAGCATCTGTGGGCTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398208.3 |
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| CDS-3UTR GCA 90 bp | AAAACATATCCCATAAGCAGAGGACAAATCACAGATGCTCCTCGACTTACGATGTGGCCAGGAATCGGCTaGCGCCCCGCACCACCAACG | + |
|
Preference number: 4 (lower is better) Translates to: KTYPISRGQITDAPRLTMWPGIG*RPAPPT Trigger: CGTTGGTGGTGCGGGGCGGCAGCCGATTCCTGGCCA...CATCGTAAGTCGAGGAGCATCTGTGATTTGTCCTCTGCTTATGGGATATGTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330317.6 |
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| CDS-3UTR GCA 90 bp | CAGATGCTCCTCGACTTACGATGGAGCTACATCCGAACAAGCTCATCGTCGGCCGTCATCATCACTGCTTaGTATGGAGGTGGCCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: QMLLDLRWSYIRTSSSSAVIITA*YGGGQE Trigger: TTCCTGGCCACCTCCATAGCAAGCAGTGATGATGAC...GGCCGACGATGAGCTTGTTCGGATGTAGCTCCATCGTAAGTCGAGGAGCATCTG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330317.6 |
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| CDS-3UTR CCA 90 bp | AGTGGTCCACGGATCGCACATAAGTGGTCCACAGTCGACAGAAACAGACCGCCACGGATCGCACATAAGTaGTCCACAGTCGACAGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: SGPRIAHKWSTVDRNRPPRIAHK*STVDRN Trigger: GTTTCTGTCGACTGTGGACCACTTATGTGCGATCCG...TGGCGGTCTGTTTCTGTCGACTGTGGACCACTTATGTGCGATCCGTGGACCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330317.6 |
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| CDS-3UTR CCA 90 bp | AGAGGAAGATGCAGCGGACACGAAGGGCGGTATGAGAACAGGAGAAACACAGACCCCCATCCTCTGAGCTaGTCACAACTGATGTCACCT | + |
|
Preference number: 4 (lower is better) Translates to: RGRCSGHEGRYENRRNTDPHPLS*SQLMSP Trigger: AGGTGACATCAGTTGTGACCAGCTCAGAGGATGGGG...GTCTGTGTTTCTCCTGTTCTCATACCGCCCTTCGTGTCCGCTGCATCTTCCTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000398208.3 |
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| CDS-3UTR TCA 90 bp | GTCAGCCCACAGATGCTCCTAGAGGAAGATGCAGCGGACACGAAGGGCGGTATGATCCTTGCTGATCGGTaGTTGAAATTCAGCAACATC | + |
|
Preference number: 4 (lower is better) Translates to: VSPQMLLEEDAADTKGGMILADR*LKFSNI Trigger: GATGTTGCTGAATTTCAATCACCGATCAGCAAGGAT...CATACCGCCCTTCGTGTCCGCTGCATCTTCCTCTAGGAGCATCTGTGGGCTGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398208.3 |
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| CDS-3UTR GCA 90 bp | CACAGACTCAGTAGCGGAAAAACATATCCCATAAGCAGAGGACAAATCACAGATCTCATCTTCTTGGCATaGCCGTCGGGCCCAGGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: HRLSSGKTYPISRGQITDLIFLA*PSGPGG Trigger: CCCGCCTGGGCCCGACGGGCATGCCAAGAAGATGAG...ATCTGTGATTTGTCCTCTGCTTATGGGATATGTTTTTCCGCTACTGAGTCTGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000330317.6 |
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| CDS-3UTR TCA 90 bp | TACTGCGGGACAGCACGTCACCTGGATGCTGAGACGGCGGAACAACATGAAAACACATTCCTAGGAAGTTaGGAAGGTTCATCCTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: YCGTARHLDAETAEQHENTFLGS*EGSSLL Trigger: CAGCAAGGATGAACCTTCTCAACTTCCTAGGAATGT...GTTTTCATGTTGTTCCGCCGTCTCAGCATCCAGGTGACGTGCTGTCCCGCAGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398208.3 |
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| CDS-3UTR GCA 90 bp | GATCGCACGCAAGTGGTCCACGGATCGCACATAAGTGGTCCACAGTCGACAGAAAGGACAAATCACAGATaGTCCTCGACTTACGATGGA | + |
|
Preference number: 4 (lower is better) Translates to: DRTQVVHGSHISGPQSTERTNHR*SSTYDG Trigger: TCCATCGTAAGTCGAGGAGCATCTGTGATTTGTCCT...TTCTGTCGACTGTGGACCACTTATGTGCGATCCGTGGACCACTTGCGTGCGATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330317.6 |
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| CDS-3UTR TCA 90 bp | AAATCAAATCATAACGACGTCCTCAATCACCTCCCTGTAAACCGGGTGCCAGCCCTCAAGCATTCGTGCTaGGTTTCAACAGCCTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: KSNHNDVLNHLPVNRVPALKHSC*VSTACV Trigger: CACACAGGCTGTTGAAACTCAGCACGAATGCTTGAG...GGCTGGCACCCGGTTTACAGGGAGGTGATTGAGGACGTCGTTATGATTTGATTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398208.3 |
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| CDS-3UTR GCA 90 bp | AAAACATATCCCATAAGCAGAGGACAAATCACAGATGCTCCTCGACTTACGATGCTCTCAGGAACAGACTaGCACTGGTCGCCCACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: KTYPISRGQITDAPRLTMLSGTD*HWSPTG Trigger: GCCTGTGGGCGACCAGTGGCAGTCTGTTCCTGAGAG...CATCGTAAGTCGAGGAGCATCTGTGATTTGTCCTCTGCTTATGGGATATGTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330317.6 |
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| CDS-3UTR CCA 90 bp | CACAGACTCAGTAGCGGAAAAACATATCCCATAAGCAGAGGACAAATCACAGATTGCTTGCTATGGAGGTaGCCAGGAATCGGCTGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: HRLSSGKTYPISRGQITDCLLWR*PGIGCR Trigger: GCGGCAGCCGATTCCTGGCCACCTCCATAGCAAGCA...ATCTGTGATTTGTCCTCTGCTTATGGGATATGTTTTTCCGCTACTGAGTCTGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000330317.6 |
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| CDS-3UTR TCA 90 bp | AGAGGAAGATGCAGCGGACACGAAGGGCGGTATGAGAACAGGAGAAACACAGACAAGGTTCATCCTTGCTaGTCGGTGATTGAAATTCAG | + |
|
Preference number: 4 (lower is better) Translates to: RGRCSGHEGRYENRRNTDKVHPC*SVIEIQ Trigger: CTGAATTTCAATCACCGATCAGCAAGGATGAACCTT...GTCTGTGTTTCTCCTGTTCTCATACCGCCCTTCGTGTCCGCTGCATCTTCCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398208.3 |
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| CDS-3UTR TCA 90 bp | AATTTACTACACAGACTCAGTAGCGGAAAAACATATCCCATAAGCAGAGGACAAAGAAGCAGCCCGGGCTaGGTTGGCACCACGGAGATA | + |
|
Preference number: 4 (lower is better) Translates to: NLLHRLSSGKTYPISRGQRSSPG*VGTTEI Trigger: TATCTCCGTGGTGCCAACTCAGCCCGGGCTGCTTCT...TTGTCCTCTGCTTATGGGATATGTTTTTCCGCTACTGAGTCTGTGTAGTAAATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000330317.6 |
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| CDS-3UTR GCA 90 bp | AATTTACTACACAGACTCAGTAGCGGAAAAACATATCCCATAAGCAGAGGACAATGCCTGTACACCAACTaGTGTCTGCGGGCGTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: NLLHRLSSGKTYPISRGQCLYTN*CLRASS Trigger: GCTGGACGCCCGCAGACAGCAGTTGGTGTACAGGCA...TTGTCCTCTGCTTATGGGATATGTTTTTCCGCTACTGAGTCTGTGTAGTAAATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000330317.6 |
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| CDS-3UTR GCA 90 bp | AATTTACTACACAGACTCAGTAGCGGAAAAACATATCCCATAAGCAGAGGACAAAACAGCATAGACAGGTaGCCCAGCTCTAGACGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: NLLHRLSSGKTYPISRGQNSIDR*PSSRRP Trigger: TGGCCGTCTAGAGCTGGGGCACCTGTCTATGCTGTT...TTGTCCTCTGCTTATGGGATATGTTTTTCCGCTACTGAGTCTGTGTAGTAAATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000330317.6 |
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| CDS-3UTR GCA 90 bp | AATTTACTACACAGACTCAGTAGCGGAAAAACATATCCCATAAGCAGAGGACAATGGAACGCCAGCTGCTaGCTGTACACCAACTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: NLLHRLSSGKTYPISRGQWNASC*LYTNCC Trigger: ACAGCAGTTGGTGTACAGGCAGCAGCTGGCGTTCCA...TTGTCCTCTGCTTATGGGATATGTTTTTCCGCTACTGAGTCTGTGTAGTAAATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000330317.6 |
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| CDS GCA 90 bp | GCGAAAGCGGACCCTCCAGGCGCAGAGACGCGGCCAGGCCGAGACTaGGGCGGAGGACTCGTGGGCTGGAGCGGAGTTCCCCGGGGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: AKADPPGAETRPGRD*GGGLVGWSGVPRGH Trigger: GTGACCCCGGGGAACTCCGCTCCAGCCCACGAGTCCTCCGCCGCAGTCTCGGCCTGGCCGCGTCTCTGCGCCTGGAGGGTCCGCTTTCGC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000470658.1 |
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| CDS GCA 90 bp | AGCGTGTTCGGCCGGGCCTTGCTGACTGGTCAGCGTCGCCCCACGTaGTCTACCTACCCGGTCCCCGCCGGCGCCGCGGAGACCGGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: SVFGRALLTGQRRPT*STYPVPAGAAETGS Trigger: GCTTCCGGTCTCCGCGGCGCCGGCGGGGACCGGGTAGGTAGAGCACGTGGGGCGACGCTGACCAGTCAGCAAGGCCCGGCCGAACACGCT 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000492742.5 |
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| CDS CCA 90 bp | GCCACGATCAGCAACTTAGCGTCGCCTCCCCCGGTCTCATCTTCTTaGCATGCCCGTCGGGCCCAGGCGGGGGACTCCGGCGCCGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: ATISNLASPPPVSSS*HARRAQAGDSGAAA Trigger: AGCAGCGGCGCCGGAGTCCCCCGCCTGGGCCCGACGGGCATGCCAAGAAGATGAGACCGGGGGAGGCGACGCTAAGTTGCTGATCGTGGC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENST00000330317.6 ENST00000398208.3 ENST00000476326.5 ENST00000492742.5 |
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| CDS CCA 90 bp | TGCGGGAGAAGCGGGGTCGCCAGGACCCGACGCGCGCCCGCAGCCTaGTCTCCCTGTTCCAAGACCAAGGCCCCCTCACCTGCTTGCTAT | + |
|
Preference number: 5 (lower is better) Translates to: CGRSGVARTRRAPAA*SPCSKTKAPSPACY Trigger: ATAGCAAGCAGGTGAGGGGGCCTTGGTCTTGGAACAGGGAGACCAGGCTGCGGGCGCGCGTCGGGTCCTGGCGACCCCGCTTCTCCCGCA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000470658.1 |
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| CDS TCA 90 bp | CCCGCTTCTTCCCAGTTCTGCAGAGCGTGTTCGGCCGGGCCTTGCTaGCTGGTCAGCGTCGCCCCACGTGCTCTACCTACCCGGTCCCCG | + |
|
Preference number: 5 (lower is better) Translates to: PASSQFCRACSAGPC*LVSVAPRALPTRSP Trigger: CGGGGACCGGGTAGGTAGAGCACGTGGGGCGACGCTGACCAGTCAGCAAGGCCCGGCCGAACACGCTCTGCAGAACTGGGAAGAAGCGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000492742.5 |
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| CDS GCA 90 bp | GCCCGCAGCCTGGTCTCCCTGTTCCAAGACCAAGGCCCCCTCACCTaGTTGCTATGGAGGTGGCCAGGAATCGGCTGCCGCCCCGCACCA | + |
|
Preference number: 5 (lower is better) Translates to: ARSLVSLFQDQGPLT*LLWRWPGIGCRPAP Trigger: TGGTGCGGGGCGGCAGCCGATTCCTGGCCACCTCCATAGCAAGCAGGTGAGGGGGCCTTGGTCTTGGAACAGGGAGACCAGGCTGCGGGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000470658.1 |
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| CDS CCA 90 bp | CTTCTTCCCAGTTCTGCAGAGCGTGTTCGGCCGGGCCTTGCTGACTaGTCAGCGTCGCCCCACGTGCTCTACCTACCCGGTCCCCGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: LLPSSAERVRPGLAD*SASPHVLYLPGPRR Trigger: CCGGCGGGGACCGGGTAGGTAGAGCACGTGGGGCGACGCTGACCAGTCAGCAAGGCCCGGCCGAACACGCTCTGCAGAACTGGGAAGAAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000492742.5 |
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| CDS CCA 90 bp | TCCCTGTTCCAAGACCAAGGCCCCCTCACCTGCTTGCTATGGAGGTaGCCAGGAATCGGCTGCCGCCCCGCACCACCAACGTCTGCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: SLFQDQGPLTCLLWR*PGIGCRPAPPTSAR Trigger: GCGGGCAGACGTTGGTGGTGCGGGGCGGCAGCCGATTCCTGGCCACCTCCATAGCAAGCAGGTGAGGGGGCCTTGGTCTTGGAACAGGGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000470658.1 |
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| CDS CCA 90 bp | CTGGTCTCCCTGTTCCAAGACCAAGGCCCCCTCACCTGCTTGCTATaGAGGTGGCCAGGAATCGGCTGCCGCCCCGCACCACCAACGTCT | + |
|
Preference number: 5 (lower is better) Translates to: LVSLFQDQGPLTCLL*RWPGIGCRPAPPTS Trigger: AGACGTTGGTGGTGCGGGGCGGCAGCCGATTCCTGGCCACCTCCATAGCAAGCAGGTGAGGGGGCCTTGGTCTTGGAACAGGGAGACCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000470658.1 |
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| CDS-3UTR CAA 90 bp | ACGCAAGTGGTCCACGGATCGCACATAAGTGGTCCACAGTCGACAGAAACAGACGCAGCCCGGGCTGAGTaGGCACCACGGAGATACGGC | + |
|
Preference number: 5 (lower is better) Translates to: TQVVHGSHISGPQSTETDAARAE*APRRYG Trigger: GCCGTATCTCCGTGGTGCCAACTCAGCCCGGGCTGC...GTCTGTTTCTGTCGACTGTGGACCACTTATGTGCGATCCGTGGACCACTTGCGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330317.6 |
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| CDS-3UTR CAA 90 bp | AGAGGAAGATGCAGCGGACACGAAGGGCGGTATGAGAACAGGAGAAACACAGACGCAGCCCGGGCTGAGTaGGCACCACGGAGATACGGC | + |
|
Preference number: 5 (lower is better) Translates to: RGRCSGHEGRYENRRNTDAARAE*APRRYG Trigger: GCCGTATCTCCGTGGTGCCAACTCAGCCCGGGCTGC...GTCTGTGTTTCTCCTGTTCTCATACCGCCCTTCGTGTCCGCTGCATCTTCCTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398208.3 |
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| CDS-3UTR CAA 90 bp | AGAGGAAGATGCAGCGGACACGAAGGGCGGTATGAGAACAGGAGAAACACAGACCCCGGTCTCATCTTCTaGGCATGCCCGTCGGGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: RGRCSGHEGRYENRRNTDPGLIF*ACPSGP Trigger: TGGGCCCGACGGGCATGCCAAGAAGATGAGACCGGG...GTCTGTGTTTCTCCTGTTCTCATACCGCCCTTCGTGTCCGCTGCATCTTCCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398208.3 |
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| CDS-3UTR CAA 90 bp | ACAGCTGCCGCCACCACCGGCTCACACGCAGCCTCCGACATGAAAAGAAAGTGCTGTCATCATCACTGCTaGCTATGGAGGTGGCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: TAAATTGSHAASDMKRKCCHHHC*LWRWPG Trigger: TCCTGGCCACCTCCATAGCAAGCAGTGATGATGACA...GCACTTTCTTTTCATGTCGGAGGCTGCGTGTGAGCCGGTGGTGGCGGCAGCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398208.3 |
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| CDS-3UTR CAA 90 bp | ACGCAAGTGGTCCACGGATCGCACATAAGTGGTCCACAGTCGACAGAAACAGACAGCCACGTCCCACACTaGGTGCTGGAACGCCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: TQVVHGSHISGPQSTETDSHVPH*VLERQL Trigger: CAGCTGGCGTTCCAGCACCAAGTGTGGGACGTGGCT...GTCTGTTTCTGTCGACTGTGGACCACTTATGTGCGATCCGTGGACCACTTGCGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330317.6 |
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| CDS-3UTR CAA 90 bp | CACCATGCCAGAAACGTCAGCCCACAGATGCTCCTAGAGGAAGATGCAGCGGACGCCTGGTATATTCGGTaGCTGCTAAACATTCCTAGG | + |
|
Preference number: 5 (lower is better) Translates to: HHARNVSPQMLLEEDAADAWYIR*LLNIPR Trigger: CCTAGGAATGTTTAGCAGCAACCGAATATACCAGGC...GTCCGCTGCATCTTCCTCTAGGAGCATCTGTGGGCTGACGTTTCTGGCATGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398208.3 |
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| CDS-3UTR CAA 90 bp | AATTTACTACACAGACTCAGTAGCGGAAAAACATATCCCATAAGCAGAGGACAACCCGGTCTCATCTTCTaGGCATGCCCGTCGGGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: NLLHRLSSGKTYPISRGQPGLIF*ACPSGP Trigger: TGGGCCCGACGGGCATGCCAAGAAGATGAGACCGGG...TTGTCCTCTGCTTATGGGATATGTTTTTCCGCTACTGAGTCTGTGTAGTAAATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000330317.6 |
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| CDS-3UTR CAA 90 bp | TACTGCGGGACAGCACGTCACCTGGATGCTGAGACGGCGGAACAACATGAAAACAACATTCCTAGGAAGTaGAGAAGGTTCATCCTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: YCGTARHLDAETAEQHENNIPRK*RRFILA Trigger: AGCAAGGATGAACCTTCTCAACTTCCTAGGAATGTT...GTTTTCATGTTGTTCCGCCGTCTCAGCATCCAGGTGACGTGCTGTCCCGCAGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398208.3 |
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| CDS-3UTR CAA 90 bp | AAAACATATCCCATAAGCAGAGGACAAATCACAGATGCTCCTCGACTTACGATGTGTCATCATCACTGCTaGCTATGGAGGTGGCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: KTYPISRGQITDAPRLTMCHHHC*LWRWPG Trigger: TCCTGGCCACCTCCATAGCAAGCAGTGATGATGACA...CATCGTAAGTCGAGGAGCATCTGTGATTTGTCCTCTGCTTATGGGATATGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330317.6 |
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| CDS GCA 72 bp | GGCCGGGCCTTGCTGACTGGTCAGCGTCGCCCCACGTaGTCTACCTACCCGGTCCCCGCCGGCGCCGCGGAG | + |
|
Preference number: 6 (lower is better) Translates to: GRALLTGQRRPT*STYPVPAGAAE Trigger: CTCCGCGGCGCCGGCGGGGACCGGGTAGGTAGAGCACGTGGGGCGACGCTGACCAGTCAGCAAGGCCCGGCC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000492742.5 |
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| CDS CCA 72 bp | AGCGGGGTCGCCAGGACCCGACGCGCGCCCGCAGCCTaGTCTCCCTGTTCCAAGACCAAGGCCCCCTCACCT | + |
|
Preference number: 6 (lower is better) Translates to: SGVARTRRAPAA*SPCSKTKAPSP Trigger: AGGTGAGGGGGCCTTGGTCTTGGAACAGGGAGACCAGGCTGCGGGCGCGCGTCGGGTCCTGGCGACCCCGCT 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000470658.1 |
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| CDS CAA 90 bp | CGCCACGATCAGCAACTTAGCGTCGCCTCCCCCGGTCTCATCTTCTaGGCATGCCCGTCGGGCCCAGGCGGGGGACTCCGGCGCCGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: RHDQQLSVASPGLIF*ACPSGPGGGLRRRC Trigger: GCAGCGGCGCCGGAGTCCCCCGCCTGGGCCCGACGGGCATGCCAAGAAGATGAGACCGGGGGAGGCGACGCTAAGTTGCTGATCGTGGCG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENST00000330317.6 ENST00000398208.3 ENST00000476326.5 ENST00000492742.5 |
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| CDS CAA 72 bp | CAGCAACTTAGCGTCGCCTCCCCCGGTCTCATCTTCTaGGCATGCCCGTCGGGCCCAGGCGGGGGACTCCGG | + |
|
Preference number: 6 (lower is better) Translates to: QQLSVASPGLIF*ACPSGPGGGLR Trigger: CCGGAGTCCCCCGCCTGGGCCCGACGGGCATGCCAAGAAGATGAGACCGGGGGAGGCGACGCTAAGTTGCTG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENST00000330317.6 ENST00000398208.3 ENST00000476326.5 ENST00000492742.5 |
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| CDS CAA 90 bp | CGCAGCCTGGTCTCCCTGTTCCAAGACCAAGGCCCCCTCACCTGCTaGCTATGGAGGTGGCCAGGAATCGGCTGCCGCCCCGCACCACCA | + |
|
Preference number: 6 (lower is better) Translates to: RSLVSLFQDQGPLTC*LWRWPGIGCRPAPP Trigger: TGGTGGTGCGGGGCGGCAGCCGATTCCTGGCCACCTCCATAGCAAGCAGGTGAGGGGGCCTTGGTCTTGGAACAGGGAGACCAGGCTGCG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000470658.1 |
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| CDS CAA 90 bp | GAGACCCGCTTCTTCCCAGTTCTGCAGAGCGTGTTCGGCCGGGCCTaGCTGACTGGTCAGCGTCGCCCCACGTGCTCTACCTACCCGGTC | + |
|
Preference number: 6 (lower is better) Translates to: ETRFFPVLQSVFGRA*LTGQRRPTCSTYPV Trigger: GACCGGGTAGGTAGAGCACGTGGGGCGACGCTGACCAGTCAGCAAGGCCCGGCCGAACACGCTCTGCAGAACTGGGAAGAAGCGGGTCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492742.5 |
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| CDS TCA 72 bp | TCCCAGTTCTGCAGAGCGTGTTCGGCCGGGCCTTGCTaGCTGGTCAGCGTCGCCCCACGTGCTCTACCTACC | + |
|
Preference number: 6 (lower is better) Translates to: SQFCRACSAGPC*LVSVAPRALPT Trigger: GGTAGGTAGAGCACGTGGGGCGACGCTGACCAGTCAGCAAGGCCCGGCCGAACACGCTCTGCAGAACTGGGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492742.5 |
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| CDS GCA 72 bp | GCCACGTCCCACACTTGGTGCTGGAACGCCAGCTGCTaGCTGTACACCAACTGCTGTCTGCGGGCGTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: ATSHTWCWNASC*LYTNCCLRASS Trigger: GCTGGACGCCCGCAGACAGCAGTTGGTGTACAGGCAGCAGCTGGCGTTCCAGCACCAAGTGTGGGACGTGGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000330317.6 ENST00000398208.3 ENST00000476326.5 ENST00000492742.5 |
||
| CDS CCA 72 bp | CTGTTCCAAGACCAAGGCCCCCTCACCTGCTTGCTATaGAGGTGGCCAGGAATCGGCTGCCGCCCCGCACCA | + |
|
Preference number: 6 (lower is better) Translates to: LFQDQGPLTCLL*RWPGIGCRPAP Trigger: TGGTGCGGGGCGGCAGCCGATTCCTGGCCACCTCCATAGCAAGCAGGTGAGGGGGCCTTGGTCTTGGAACAG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000470658.1 |
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| CDS CCA 72 bp | AGTTCTGCAGAGCGTGTTCGGCCGGGCCTTGCTGACTaGTCAGCGTCGCCCCACGTGCTCTACCTACCCGGT | + |
|
Preference number: 6 (lower is better) Translates to: SSAERVRPGLAD*SASPHVLYLPG Trigger: ACCGGGTAGGTAGAGCACGTGGGGCGACGCTGACCAGTCAGCAAGGCCCGGCCGAACACGCTCTGCAGAACT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492742.5 |
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| CDS CAA 72 bp | GTCTCCCTGTTCCAAGACCAAGGCCCCCTCACCTGCTaGCTATGGAGGTGGCCAGGAATCGGCTGCCGCCCC | + |
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Preference number: 6 (lower is better) Translates to: VSLFQDQGPLTC*LWRWPGIGCRP Trigger: GGGGCGGCAGCCGATTCCTGGCCACCTCCATAGCAAGCAGGTGAGGGGGCCTTGGTCTTGGAACAGGGAGAC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000470658.1 |
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| CDS GCA 72 bp | CTGGTCTCCCTGTTCCAAGACCAAGGCCCCCTCACCTaGTTGCTATGGAGGTGGCCAGGAATCGGCTGCCGC | + |
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Preference number: 6 (lower is better) Translates to: LVSLFQDQGPLT*LLWRWPGIGCR Trigger: GCGGCAGCCGATTCCTGGCCACCTCCATAGCAAGCAGGTGAGGGGGCCTTGGTCTTGGAACAGGGAGACCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000470658.1 |
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| CDS CAA 72 bp | TTCTTCCCAGTTCTGCAGAGCGTGTTCGGCCGGGCCTaGCTGACTGGTCAGCGTCGCCCCACGTGCTCTACC | + |
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Preference number: 6 (lower is better) Translates to: FFPVLQSVFGRA*LTGQRRPTCST Trigger: GGTAGAGCACGTGGGGCGACGCTGACCAGTCAGCAAGGCCCGGCCGAACACGCTCTGCAGAACTGGGAAGAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492742.5 |
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| CDS CCA 72 bp | AGATCGCACGCAAGTGGTCCACGGATCGCACATAAGTaGTCCACAGTCGACAGAAACAGACCGCCACGATCA | + |
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Preference number: 6 (lower is better) Translates to: RSHASGPRIAHK*STVDRNRPPRS Trigger: TGATCGTGGCGGTCTGTTTCTGTCGACTGTGGACCACTTATGTGCGATCCGTGGACCACTTGCGTGCGATCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330317.6 |
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