RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for WDR38 (Homo sapiens)

Ensembl gene IDs: ENSG00000136918

Ensembl transcript IDs: ENST00000373574.2, ENST00000613760.4, ENST00000618744.4

Found 227 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCAGCAAGCGTCCTGCCCACCACAGTTGTCTGCTCTGGTGGGGCCTaGAGAGTCCTGGCCATGGGGATCTGCTGGATGCCAGCACAGTCA +
Preference number: 1 (lower is better)
Translates to: PASVLPTTVVCSGGA*RVLAMGICWMPAQS
Trigger: TGACTGTGCTGGCATCCAGCAGATCCCCATGGCCAGGACTCTCCAGGCCCCACCAGAGCAGACAACTGTGGTGGGCAGGACGCTTGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
3UTR CCA 90 bp CTGATGGGTTCCAGCAAGCGTCCTGCCCACCACAGTTGTCTGCTCTaGTGGGGCCTGGAGAGTCCTGGCCATGGGGATCTGCTGGATGCC +
Preference number: 1 (lower is better)
Translates to: LMGSSKRPAHHSCLL*WGLESPGHGDLLDA
Trigger: GGCATCCAGCAGATCCCCATGGCCAGGACTCTCCAGGCCCCACCAGAGCAGACAACTGTGGTGGGCAGGACGCTTGCTGGAACCCATCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
3UTR-3UTR TCA 90 bp CTGATGGGTTCCAGCAAGCGTCCTGCCCACCACAGTTGTCTGCTCTGGTGGGGCATGCCTGTGCGCCACTaGGGGGAGCGGGTGAGGTCG +
Preference number: 2 (lower is better)
Translates to: LMGSSKRPAHHSCLLWWGMPVRH*GERVRS
Trigger: CGACCTCACCCGCTCCCCTCAGTGGCGCACAGGCAT...GCCCCACCAGAGCAGACAACTGTGGTGGGCAGGACGCTTGCTGGAACCCATCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
3UTR CAA 90 bp GAGAGTCCTGGCCATGGGGATCTGCTGGATGCCAGCACAGTCACTTaGCGTCTGTGGGGAGAAGCGGCATGCCTGTGCGCCACTGAGGGG +
Preference number: 2 (lower is better)
Translates to: ESPGHGDLLDASTVT*RLWGEAACLCATEG
Trigger: CCCCTCAGTGGCGCACAGGCATGCCGCTTCTCCCCACAGACGCAAAGTGACTGTGCTGGCATCCAGCAGATCCCCATGGCCAGGACTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
3UTR-3UTR TCA 90 bp ATTGGGTGGAGGTGGGTGGGTCTGGTTTTGGGGACCAGGTGTCTGATGGGTTCCATGCCTGTGCGCCACTaGGGGGAGCGGGTGAGGTCG +
Preference number: 2 (lower is better)
Translates to: IGWRWVGLVLGTRCLMGSMPVRH*GERVRS
Trigger: CGACCTCACCCGCTCCCCTCAGTGGCGCACAGGCAT...GGAACCCATCAGACACCTGGTCCCCAAAACCAGACCCACCCACCTCCACCCAAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
3UTR CAA 90 bp GACCAGGTGTCTGATGGGTTCCAGCAAGCGTCCTGCCCACCACAGTaGTCTGCTCTGGTGGGGCCTGGAGAGTCCTGGCCATGGGGATCT +
Preference number: 2 (lower is better)
Translates to: DQVSDGFQQASCPPQ*SALVGPGESWPWGS
Trigger: AGATCCCCATGGCCAGGACTCTCCAGGCCCCACCAGAGCAGACAACTGTGGTGGGCAGGACGCTTGCTGGAACCCATCAGACACCTGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
3UTR-3UTR TCA 90 bp CCTGGCACTTCCACTGATTGGGTGGAGGTGGGTGGGTCTGGTTTTGGGGACCAGACTGAGGGGAGCGGGTaGGGTCGGCACCATCTAAGG +
Preference number: 2 (lower is better)
Translates to: PGTSTDWVEVGGSGFGDQTEGSG*GRHHLR
Trigger: CCTTAGATGGTGCCGACCTCACCCGCTCCCCTCAGT...CTGGTCCCCAAAACCAGACCCACCCACCTCCACCCAATCAGTGGAAGTGCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
3UTR-3UTR GCA 90 bp GTGGAGGTGGGTGGGTCTGGTTTTGGGGACCAGGTGTCTGATGGGTTCCAGCAATGGGGAGAAGCGGCATaGCTGTGCGCCACTGAGGGG +
Preference number: 2 (lower is better)
Translates to: VEVGGSGFGDQVSDGFQQWGEAA*LCATEG
Trigger: CCCCTCAGTGGCGCACAGGCATGCCGCTTCTCCCCA...TTGCTGGAACCCATCAGACACCTGGTCCCCAAAACCAGACCCACCCACCTCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
3UTR-3UTR GCA 90 bp GTGTCTGATGGGTTCCAGCAAGCGTCCTGCCCACCACAGTTGTCTGCTCTGGTGTGGGGAGAAGCGGCATaGCTGTGCGCCACTGAGGGG +
Preference number: 2 (lower is better)
Translates to: VSDGFQQASCPPQLSALVWGEAA*LCATEG
Trigger: CCCCTCAGTGGCGCACAGGCATGCCGCTTCTCCCCA...CACCAGAGCAGACAACTGTGGTGGGCAGGACGCTTGCTGGAACCCATCAGACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
3UTR-3UTR CCA 90 bp CTGATGGGTTCCAGCAAGCGTCCTGCCCACCACAGTTGTCTGCTCTGGTGGGGCGGAGAGTCCTGGCCATaGGGATCTGCTGGATGCCAG +
Preference number: 2 (lower is better)
Translates to: LMGSSKRPAHHSCLLWWGGESWP*GSAGCQ
Trigger: CTGGCATCCAGCAGATCCCCATGGCCAGGACTCTCC...GCCCCACCAGAGCAGACAACTGTGGTGGGCAGGACGCTTGCTGGAACCCATCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
3UTR-3UTR TCA 90 bp AGGTGTCTGATGGGTTCCAGCAAGCGTCCTGCCCACCACAGTTGTCTGCTCTGGACTGAGGGGAGCGGGTaGGGTCGGCACCATCTAAGG +
Preference number: 2 (lower is better)
Translates to: RCLMGSSKRPAHHSCLLWTEGSG*GRHHLR
Trigger: CCTTAGATGGTGCCGACCTCACCCGCTCCCCTCAGT...CCAGAGCAGACAACTGTGGTGGGCAGGACGCTTGCTGGAACCCATCAGACACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
3UTR-3UTR CCA 90 bp TTTGGGGACCAGGTGTCTGATGGGTTCCAGCAAGCGTCCTGCCCACCACAGTTGGGGCCTGGAGAGTCCTaGCCATGGGGATCTGCTGGA +
Preference number: 2 (lower is better)
Translates to: FGDQVSDGFQQASCPPQLGPGES*PWGSAG
Trigger: TCCAGCAGATCCCCATGGCCAGGACTCTCCAGGCCC...CAACTGTGGTGGGCAGGACGCTTGCTGGAACCCATCAGACACCTGGTCCCCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
3UTR-3UTR GCA 90 bp GTGGGTGGGTCTGGTTTTGGGGACCAGGTGTCTGATGGGTTCCAGCAAGCGTCCCTGGCCATGGGGATCTaGTGGATGCCAGCACAGTCA +
Preference number: 2 (lower is better)
Translates to: VGGSGFGDQVSDGFQQASLAMGI*WMPAQS
Trigger: TGACTGTGCTGGCATCCAGCAGATCCCCATGGCCAG...GGACGCTTGCTGGAACCCATCAGACACCTGGTCCCCAAAACCAGACCCACCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
3UTR-3UTR CCA 90 bp TCCACTGATTGGGTGGAGGTGGGTGGGTCTGGTTTTGGGGACCAGGTGTCTGATGGGCCTGGAGAGTCCTaGCCATGGGGATCTGCTGGA +
Preference number: 2 (lower is better)
Translates to: STDWVEVGGSGFGDQVSDGPGES*PWGSAG
Trigger: TCCAGCAGATCCCCATGGCCAGGACTCTCCAGGCCC...ATCAGACACCTGGTCCCCAAAACCAGACCCACCCACCTCCACCCAATCAGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
3UTR-3UTR GCA 90 bp GTGGAGGTGGGTGGGTCTGGTTTTGGGGACCAGGTGTCTGATGGGTTCCAGCAACCAGCACAGTCACTTTaGGTCTGTGGGGAGAAGCGG +
Preference number: 2 (lower is better)
Translates to: VEVGGSGFGDQVSDGFQQPAQSL*VCGEKR
Trigger: CCGCTTCTCCCCACAGACGCAAAGTGACTGTGCTGG...TTGCTGGAACCCATCAGACACCTGGTCCCCAAAACCAGACCCACCCACCTCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
3UTR-3UTR CCA 90 bp ATTGGGTGGAGGTGGGTGGGTCTGGTTTTGGGGACCAGGTGTCTGATGGGTTCCGTCACTTTGCGTCTGTaGGGAGAAGCGGCATGCCTG +
Preference number: 2 (lower is better)
Translates to: IGWRWVGLVLGTRCLMGSVTLRL*GEAACL
Trigger: CAGGCATGCCGCTTCTCCCCACAGACGCAAAGTGAC...GGAACCCATCAGACACCTGGTCCCCAAAACCAGACCCACCCACCTCCACCCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
3UTR-3UTR GCA 90 bp GTGTCTGATGGGTTCCAGCAAGCGTCCTGCCCACCACAGTTGTCTGCTCTGGTGTGGGGATCTGCTGGATaGCAGCACAGTCACTTTGCG +
Preference number: 2 (lower is better)
Translates to: VSDGFQQASCPPQLSALVWGSAG*QHSHFA
Trigger: CGCAAAGTGACTGTGCTGGCATCCAGCAGATCCCCA...CACCAGAGCAGACAACTGTGGTGGGCAGGACGCTTGCTGGAACCCATCAGACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
3UTR-3UTR GCA 90 bp TTTCCTGGCACTTCCACTGATTGGGTGGAGGTGGGTGGGTCTGGTTTTGGGGACCTGGCCATGGGGATCTaGTGGATGCCAGCACAGTCA +
Preference number: 2 (lower is better)
Translates to: FPGTSTDWVEVGGSGFGDLAMGI*WMPAQS
Trigger: TGACTGTGCTGGCATCCAGCAGATCCCCATGGCCAG...GTCCCCAAAACCAGACCCACCCACCTCCACCCAATCAGTGGAAGTGCCAGGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
3UTR-3UTR CCA 90 bp TTTGGGGACCAGGTGTCTGATGGGTTCCAGCAAGCGTCCTGCCCACCACAGTTGGCCATGGGGATCTGCTaGATGCCAGCACAGTCACTT +
Preference number: 2 (lower is better)
Translates to: FGDQVSDGFQQASCPPQLAMGIC*MPAQSL
Trigger: AAGTGACTGTGCTGGCATCCAGCAGATCCCCATGGC...CAACTGTGGTGGGCAGGACGCTTGCTGGAACCCATCAGACACCTGGTCCCCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
3UTR-3UTR CCA 90 bp AGGTGTCTGATGGGTTCCAGCAAGCGTCCTGCCCACCACAGTTGTCTGCTCTGGGCCATGGGGATCTGCTaGATGCCAGCACAGTCACTT +
Preference number: 2 (lower is better)
Translates to: RCLMGSSKRPAHHSCLLWAMGIC*MPAQSL
Trigger: AAGTGACTGTGCTGGCATCCAGCAGATCCCCATGGC...CCAGAGCAGACAACTGTGGTGGGCAGGACGCTTGCTGGAACCCATCAGACACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
3UTR-3UTR CCA 90 bp GTGGAGGTGGGTGGGTCTGGTTTTGGGGACCAGGTGTCTGATGGGTTCCAGCAAGCCATGGGGATCTGCTaGATGCCAGCACAGTCACTT +
Preference number: 2 (lower is better)
Translates to: VEVGGSGFGDQVSDGFQQAMGIC*MPAQSL
Trigger: AAGTGACTGTGCTGGCATCCAGCAGATCCCCATGGC...TTGCTGGAACCCATCAGACACCTGGTCCCCAAAACCAGACCCACCCACCTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
3UTR-3UTR GCA 90 bp TTTCCTGGCACTTCCACTGATTGGGTGGAGGTGGGTGGGTCTGGTTTTGGGGACTGGGGATCTGCTGGATaGCAGCACAGTCACTTTGCG +
Preference number: 2 (lower is better)
Translates to: FPGTSTDWVEVGGSGFGDWGSAG*QHSHFA
Trigger: CGCAAAGTGACTGTGCTGGCATCCAGCAGATCCCCA...GTCCCCAAAACCAGACCCACCCACCTCCACCCAATCAGTGGAAGTGCCAGGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
3UTR TCA 72 bp GCGTCTGTGGGGAGAAGCGGCATGCCTGTGCGCCACTaGGGGGAGCGGGTGAGGTCGGCACCATCTAAGGTG +
Preference number: 3 (lower is better)
Translates to: ASVGRSGMPVRH*GERVRSAPSKV
Trigger: CACCTTAGATGGTGCCGACCTCACCCGCTCCCCTCAGTGGCGCACAGGCATGCCGCTTCTCCCCACAGACGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
3UTR GCA 72 bp TGGGTTCCAGCAAGCGTCCTGCCCACCACAGTTGTCTaGTCTGGTGGGGCCTGGAGAGTCCTGGCCATGGGG +
Preference number: 3 (lower is better)
Translates to: WVPASVLPTTVV*SGGAWRVLAMG
Trigger: CCCCATGGCCAGGACTCTCCAGGCCCCACCAGAGCAGACAACTGTGGTGGGCAGGACGCTTGCTGGAACCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
3UTR GCA 72 bp GGGGACCAGGTGTCTGATGGGTTCCAGCAAGCGTCCTaGCCACCACAGTTGTCTGCTCTGGTGGGGCCTGGA +
Preference number: 3 (lower is better)
Translates to: GDQVSDGFQQAS*PPQLSALVGPG
Trigger: TCCAGGCCCCACCAGAGCAGACAACTGTGGTGGGCAGGACGCTTGCTGGAACCCATCAGACACCTGGTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
3UTR CCA 72 bp GTCCTGCCCACCACAGTTGTCTGCTCTGGTGGGGCCTaGAGAGTCCTGGCCATGGGGATCTGCTGGATGCCA +
Preference number: 3 (lower is better)
Translates to: VLPTTVVCSGGA*RVLAMGICWMP
Trigger: TGGCATCCAGCAGATCCCCATGGCCAGGACTCTCCAGGCCCCACCAGAGCAGACAACTGTGGTGGGCAGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
3UTR CCA 72 bp AGCAAGCGTCCTGCCCACCACAGTTGTCTGCTCTGGTaGGGCCTGGAGAGTCCTGGCCATGGGGATCTGCTG +
Preference number: 3 (lower is better)
Translates to: SKRPAHHSCLLW*GLESPGHGDLL
Trigger: CAGCAGATCCCCATGGCCAGGACTCTCCAGGCCCCACCAGAGCAGACAACTGTGGTGGGCAGGACGCTTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
3UTR GCA 72 bp GCCATGGGGATCTGCTGGATGCCAGCACAGTCACTTTaGGTCTGTGGGGAGAAGCGGCATGCCTGTGCGCCA +
Preference number: 3 (lower is better)
Translates to: AMGICWMPAQSL*VCGEKRHACAP
Trigger: TGGCGCACAGGCATGCCGCTTCTCCCCACAGACGCAAAGTGACTGTGCTGGCATCCAGCAGATCCCCATGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
3UTR GCA 72 bp TCTGGTGGGGCCTGGAGAGTCCTGGCCATGGGGATCTaGTGGATGCCAGCACAGTCACTTTGCGTCTGTGGG +
Preference number: 3 (lower is better)
Translates to: SGGAWRVLAMGI*WMPAQSLCVCG
Trigger: CCCACAGACGCAAAGTGACTGTGCTGGCATCCAGCAGATCCCCATGGCCAGGACTCTCCAGGCCCCACCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
3UTR CCA 72 bp GATCTGCTGGATGCCAGCACAGTCACTTTGCGTCTGTaGGGAGAAGCGGCATGCCTGTGCGCCACTGAGGGG +
Preference number: 3 (lower is better)
Translates to: DLLDASTVTLRL*GEAACLCATEG
Trigger: CCCCTCAGTGGCGCACAGGCATGCCGCTTCTCCCCACAGACGCAAAGTGACTGTGCTGGCATCCAGCAGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
3UTR-3UTR CAA 90 bp TTCCTGGCACTTCCACTGATTGGGTGGAGGTGGGTGGGTCTGGTTTTGGGGACCTCCTGCCCACCACAGTaGTCTGCTCTGGTGGGGCCT +
Preference number: 3 (lower is better)
Translates to: FLALPLIGWRWVGLVLGTSCPPQ*SALVGP
Trigger: AGGCCCCACCAGAGCAGACAACTGTGGTGGGCAGGA...GGTCCCCAAAACCAGACCCACCCACCTCCACCCAATCAGTGGAAGTGCCAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
3UTR TCA 72 bp GGAGGTGGGTGGGTCTGGTTTTGGGGACCAGGTGTCTaGTGGGTTCCAGCAAGCGTCCTGCCCACCACAGTT +
Preference number: 3 (lower is better)
Translates to: GGGWVWFWGPGV*WVPASVLPTTV
Trigger: AACTGTGGTGGGCAGGACGCTTGCTGGAACCCATCAGACACCTGGTCCCCAAAACCAGACCCACCCACCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
3UTR CCA 72 bp CTTTGTTTCCTGGCACTTCCACTGATTGGGTGGAGGTaGGTGGGTCTGGTTTTGGGGACCAGGTGTCTGATG +
Preference number: 3 (lower is better)
Translates to: LCFLALPLIGWR*VGLVLGTRCLM
Trigger: CATCAGACACCTGGTCCCCAAAACCAGACCCACCCACCTCCACCCAATCAGTGGAAGTGCCAGGAAACAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613760.4
ENST00000618744.4
3UTR CCA 72 bp AGACTGCTTTGTTTCCTGGCACTTCCACTGATTGGGTaGAGGTGGGTGGGTCTGGTTTTGGGGACCAGGTGT +
Preference number: 3 (lower is better)
Translates to: RLLCFLALPLIG*RWVGLVLGTRC
Trigger: ACACCTGGTCCCCAAAACCAGACCCACCCACCTCCACCCAATCAGTGGAAGTGCCAGGAAACAAAGCAGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CCA 90 bp TGTGGGGAGAAGCGGCATGCCTGTGCGCCACTGAGGGGAGCGGGTGAGGTCGGCTCCGCACGGCCAGCGTaGCCGGGACCCCGCTGTTCA +
Preference number: 4 (lower is better)
Translates to: CGEKRHACAPLRGAGEVGSARPA*PGPRCS
Trigger: TGAACAGCGGGGTCCCGGCCACGCTGGCCGTGCGGA...GCCGACCTCACCCGCTCCCCTCAGTGGCGCACAGGCATGCCGCTTCTCCCCACA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR TCA 90 bp GAGAAGCGGCATGCCTGTGCGCCACTGAGGGGAGCGGGTGAGGTCGGCACCATCATGCCTGTGCGCCACTaGGGGGAGCGGGTGAGGTCG +
Preference number: 4 (lower is better)
Translates to: EKRHACAPLRGAGEVGTIMPVRH*GERVRS
Trigger: CGACCTCACCCGCTCCCCTCAGTGGCGCACAGGCAT...GATGGTGCCGACCTCACCCGCTCCCCTCAGTGGCGCACAGGCATGCCGCTTCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR GCA 90 bp GAGAAGCGGCATGCCTGTGCGCCACTGAGGGGAGCGGGTGAGGTCGGCACCATCCGCCTGGTGGGAGACTaGTGGGGTCACCATCCGCAG +
Preference number: 4 (lower is better)
Translates to: EKRHACAPLRGAGEVGTIRLVGD*WGHHPQ
Trigger: CTGCGGATGGTGACCCCAGCAGTCTCCCACCAGGCG...GATGGTGCCGACCTCACCCGCTCCCCTCAGTGGCGCACAGGCATGCCGCTTCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR GCA 90 bp GGGGAGAAGCGGCATGCCTGTGCGCCACTGAGGGGAGCGGGTGAGGTCGGCACCAGCATCTGGCCGGACTaGACATCCCAGAGCATCACC +
Preference number: 4 (lower is better)
Translates to: GEKRHACAPLRGAGEVGTSIWPD*TSQSIT
Trigger: GGTGATGCTCTGGGATGTGCAGTCCGGCCAGATGCT...GGTGCCGACCTCACCCGCTCCCCTCAGTGGCGCACAGGCATGCCGCTTCTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CCA 90 bp TGTGGGGAGAAGCGGCATGCCTGTGCGCCACTGAGGGGAGCGGGTGAGGTCGGCGTGAAGGCACAGGTGTaGGCCACATCCAGGACTCCC +
Preference number: 4 (lower is better)
Translates to: CGEKRHACAPLRGAGEVGVKAQV*ATSRTP
Trigger: GGGAGTCCTGGATGTGGCCCACACCTGTGCCTTCAC...GCCGACCTCACCCGCTCCCCTCAGTGGCGCACAGGCATGCCGCTTCTCCCCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR TCA 90 bp GGGGAGAAGCGGCATGCCTGTGCGCCACTGAGGGGAGCGGGTGAGGTCGGCACCTGCTCTTCACCCAGGTaGCATGGCCCTTCAGTTGGA +
Preference number: 4 (lower is better)
Translates to: GEKRHACAPLRGAGEVGTCSSPR*HGPSVG
Trigger: TCCAACTGAAGGGCCATGTCACCTGGGTGAAGAGCA...GGTGCCGACCTCACCCGCTCCCCTCAGTGGCGCACAGGCATGCCGCTTCTCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR GCA 90 bp GGGGAGAAGCGGCATGCCTGTGCGCCACTGAGGGGAGCGGGTGAGGTCGGCACCTTGACCTCCCCGCCGTaGTGGCCGAAGAATTTCACT +
Preference number: 4 (lower is better)
Translates to: GEKRHACAPLRGAGEVGTLTSPP*WPKNFT
Trigger: AGTGAAATTCTTCGGCCAGCACGGCGGGGAGGTCAA...GGTGCCGACCTCACCCGCTCCCCTCAGTGGCGCACAGGCATGCCGCTTCTCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR GCA 90 bp TCACTTTGCGTCTGTGGGGAGAAGCGGCATGCCTGTGCGCCACTGAGGGGAGCGTGGGGAGAAGCGGCATaGCTGTGCGCCACTGAGGGG +
Preference number: 4 (lower is better)
Translates to: SLCVCGEKRHACAPLRGAWGEAA*LCATEG
Trigger: CCCCTCAGTGGCGCACAGGCATGCCGCTTCTCCCCA...CGCTCCCCTCAGTGGCGCACAGGCATGCCGCTTCTCCCCACAGACGCAAAGTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR GCA 90 bp GAGAAGCGGCATGCCTGTGCGCCACTGAGGGGAGCGGGTGAGGTCGGCACCATCCCCACCACAGTTGTCTaGTCTGGTGGGGCCTGGAGA +
Preference number: 4 (lower is better)
Translates to: EKRHACAPLRGAGEVGTIPTTVV*SGGAWR
Trigger: TCTCCAGGCCCCACCAGAGCAGACAACTGTGGTGGG...GATGGTGCCGACCTCACCCGCTCCCCTCAGTGGCGCACAGGCATGCCGCTTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CCA 90 bp TGTGGGGAGAAGCGGCATGCCTGTGCGCCACTGAGGGGAGCGGGTGAGGTCGGCACCTCCCCGCCGTGCTaGCCGAAGAATTTCACTCTC +
Preference number: 4 (lower is better)
Translates to: CGEKRHACAPLRGAGEVGTSPPC*PKNFTL
Trigger: GAGAGTGAAATTCTTCGGCCAGCACGGCGGGGAGGT...GCCGACCTCACCCGCTCCCCTCAGTGGCGCACAGGCATGCCGCTTCTCCCCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR TCA 90 bp GAGAAGCGGCATGCCTGTGCGCCACTGAGGGGAGCGGGTGAGGTCGGCACCATCCACGCAGCCATCTTCTaGGCCTGTGAGCAGCATCTG +
Preference number: 4 (lower is better)
Translates to: EKRHACAPLRGAGEVGTIHAAIF*ACEQHL
Trigger: CAGATGCTGCTCACAGGCTCAGAAGATGGCTGCGTG...GATGGTGCCGACCTCACCCGCTCCCCTCAGTGGCGCACAGGCATGCCGCTTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CCA 90 bp ATTGGGTGGAGGTGGGTGGGTCTGGTTTTGGGGACCAGGTGTCTGATGGGTTCCTCCGCACGGCCAGCGTaGCCGGGACCCCGCTGTTCA +
Preference number: 4 (lower is better)
Translates to: IGWRWVGLVLGTRCLMGSSARPA*PGPRCS
Trigger: TGAACAGCGGGGTCCCGGCCACGCTGGCCGTGCGGA...GGAACCCATCAGACACCTGGTCCCCAAAACCAGACCCACCCACCTCCACCCAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CCA 90 bp GTGGAGGTGGGTGGGTCTGGTTTTGGGGACCAGGTGTCTGATGGGTTCCAGCAATCCGCACGGCCAGCGTaGCCGGGACCCCGCTGTTCA +
Preference number: 4 (lower is better)
Translates to: VEVGGSGFGDQVSDGFQQSARPA*PGPRCS
Trigger: TGAACAGCGGGGTCCCGGCCACGCTGGCCGTGCGGA...TTGCTGGAACCCATCAGACACCTGGTCCCCAAAACCAGACCCACCCACCTCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CCA 90 bp TGGATGCCAGCACAGTCACTTTGCGTCTGTGGGGAGAAGCGGCATGCCTGTGCGGGGAATAGCCGGCGCTaGCCAGCCACAGCTCGTCGG +
Preference number: 4 (lower is better)
Translates to: WMPAQSLCVCGEKRHACAGNSRR*PATARR
Trigger: CCGACGAGCTGTGGCTGGCCAGCGCCGGCTATTCCC...CGCACAGGCATGCCGCTTCTCCCCACAGACGCAAAGTGACTGTGCTGGCATCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CCA 90 bp TGCCAGCACAGTCACTTTGCGTCTGTGGGGAGAAGCGGCATGCCTGTGCGCCACTGCTCTGGTGGGGCCTaGAGAGTCCTGGCCATGGGG +
Preference number: 4 (lower is better)
Translates to: CQHSHFASVGRSGMPVRHCSGGA*RVLAMG
Trigger: CCCCATGGCCAGGACTCTCCAGGCCCCACCAGAGCA...GTGGCGCACAGGCATGCCGCTTCTCCCCACAGACGCAAAGTGACTGTGCTGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
3UTR CAA 72 bp GGCCATGGGGATCTGCTGGATGCCAGCACAGTCACTTaGCGTCTGTGGGGAGAAGCGGCATGCCTGTGCGCC +
Preference number: 4 (lower is better)
Translates to: GHGDLLDASTVT*RLWGEAACLCA
Trigger: GGCGCACAGGCATGCCGCTTCTCCCCACAGACGCAAAGTGACTGTGCTGGCATCCAGCAGATCCCCATGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR TCA 90 bp ACCAGGTGTCTGATGGGTTCCAGCAAGCGTCCTGCCCACCACAGTTGTCTGCTCATGCCTGTGCGCCACTaGGGGGAGCGGGTGAGGTCG +
Preference number: 4 (lower is better)
Translates to: TRCLMGSSKRPAHHSCLLMPVRH*GERVRS
Trigger: CGACCTCACCCGCTCCCCTCAGTGGCGCACAGGCAT...GAGCAGACAACTGTGGTGGGCAGGACGCTTGCTGGAACCCATCAGACACCTGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR GCA 90 bp TCTGATGGGTTCCAGCAAGCGTCCTGCCCACCACAGTTGTCTGCTCTGGTGGGGAGCCTCCACAGCAGCTaGCCACTCCGGGTCTCCCAG +
Preference number: 4 (lower is better)
Translates to: SDGFQQASCPPQLSALVGSLHSS*PLRVSQ
Trigger: CTGGGAGACCCGGAGTGGGCAGCTGCTGTGGAGGCT...CCCCACCAGAGCAGACAACTGTGGTGGGCAGGACGCTTGCTGGAACCCATCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR GCA 90 bp GGTGGGTCTGGTTTTGGGGACCAGGTGTCTGATGGGTTCCAGCAAGCGTCCTGCAGCCTCCACAGCAGCTaGCCACTCCGGGTCTCCCAG +
Preference number: 4 (lower is better)
Translates to: GGSGFGDQVSDGFQQASCSLHSS*PLRVSQ
Trigger: CTGGGAGACCCGGAGTGGGCAGCTGCTGTGGAGGCT...GCAGGACGCTTGCTGGAACCCATCAGACACCTGGTCCCCAAAACCAGACCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CCA 90 bp GAGAAGCGGCATGCCTGTGCGCCACTGAGGGGAGCGGGTGAGGTCGGCACCATCAGTCGCTGCTCTGGATaGAGTCACGGTGCCCAACTA +
Preference number: 4 (lower is better)
Translates to: EKRHACAPLRGAGEVGTISRCSG*SHGAQL
Trigger: TAGTTGGGCACCGTGACTCCATCCAGAGCAGCGACT...GATGGTGCCGACCTCACCCGCTCCCCTCAGTGGCGCACAGGCATGCCGCTTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CCA 90 bp TGGATGCCAGCACAGTCACTTTGCGTCTGTGGGGAGAAGCGGCATGCCTGTGCGCCCTCTAGCGCCTGGTaGGAGACTGCTGGGGTCACC +
Preference number: 4 (lower is better)
Translates to: WMPAQSLCVCGEKRHACAPSSAW*ETAGVT
Trigger: GGTGACCCCAGCAGTCTCCCACCAGGCGCTAGAGGG...CGCACAGGCATGCCGCTTCTCCCCACAGACGCAAAGTGACTGTGCTGGCATCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CCA 90 bp GTGGGTGGGTCTGGTTTTGGGGACCAGGTGTCTGATGGGTTCCAGCAAGCGTCCCCCTCTAGCGCCTGGTaGGAGACTGCTGGGGTCACC +
Preference number: 4 (lower is better)
Translates to: VGGSGFGDQVSDGFQQASPSSAW*ETAGVT
Trigger: GGTGACCCCAGCAGTCTCCCACCAGGCGCTAGAGGG...GGACGCTTGCTGGAACCCATCAGACACCTGGTCCCCAAAACCAGACCCACCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CCA 90 bp CCAGCACAGTCACTTTGCGTCTGTGGGGAGAAGCGGCATGCCTGTGCGCCACTGTGTCCCTCTAGCGCCTaGTGGGAGACTGCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: PAQSLCVCGEKRHACAPLCPSSA*WETAGV
Trigger: GACCCCAGCAGTCTCCCACCAGGCGCTAGAGGGACA...CAGTGGCGCACAGGCATGCCGCTTCTCCCCACAGACGCAAAGTGACTGTGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CCA 90 bp ACCAGGTGTCTGATGGGTTCCAGCAAGCGTCCTGCCCACCACAGTTGTCTGCTCGGGAATAGCCGGCGCTaGCCAGCCACAGCTCGTCGG +
Preference number: 4 (lower is better)
Translates to: TRCLMGSSKRPAHHSCLLGNSRR*PATARR
Trigger: CCGACGAGCTGTGGCTGGCCAGCGCCGGCTATTCCC...GAGCAGACAACTGTGGTGGGCAGGACGCTTGCTGGAACCCATCAGACACCTGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CCA 90 bp CTGATTGGGTGGAGGTGGGTGGGTCTGGTTTTGGGGACCAGGTGTCTGATGGGTGGGAATAGCCGGCGCTaGCCAGCCACAGCTCGTCGG +
Preference number: 4 (lower is better)
Translates to: LIGWRWVGLVLGTRCLMGGNSRR*PATARR
Trigger: CCGACGAGCTGTGGCTGGCCAGCGCCGGCTATTCCC...ACCCATCAGACACCTGGTCCCCAAAACCAGACCCACCCACCTCCACCCAATCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CCA 90 bp TCACTTTGCGTCTGTGGGGAGAAGCGGCATGCCTGTGCGCCACTGAGGGGAGCGGTGAAGGCACAGGTGTaGGCCACATCCAGGACTCCC +
Preference number: 4 (lower is better)
Translates to: SLCVCGEKRHACAPLRGAVKAQV*ATSRTP
Trigger: GGGAGTCCTGGATGTGGCCCACACCTGTGCCTTCAC...CGCTCCCCTCAGTGGCGCACAGGCATGCCGCTTCTCCCCACAGACGCAAAGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CCA 90 bp GGGGAGAAGCGGCATGCCTGTGCGCCACTGAGGGGAGCGGGTGAGGTCGGCACCCGGCACCATCTAAGGTaGTTGGTGTTAGGTTTGAGG +
Preference number: 4 (lower is better)
Translates to: GEKRHACAPLRGAGEVGTRHHLR*LVLGLR
Trigger: CCTCAAACCTAACACCAACCACCTTAGATGGTGCCG...GGTGCCGACCTCACCCGCTCCCCTCAGTGGCGCACAGGCATGCCGCTTCTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CCA 90 bp CTGATGGGTTCCAGCAAGCGTCCTGCCCACCACAGTTGTCTGCTCTGGTGGGGCGGGCCTGGAGAGTCCTaGCCATGGGGATCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: LMGSSKRPAHHSCLLWWGGPGES*PWGSAG
Trigger: TCCAGCAGATCCCCATGGCCAGGACTCTCCAGGCCC...GCCCCACCAGAGCAGACAACTGTGGTGGGCAGGACGCTTGCTGGAACCCATCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CCA 90 bp GTGGGTCTGGTTTTGGGGACCAGGTGTCTGATGGGTTCCAGCAAGCGTCCTGCCTGCTCTGGTGGGGCCTaGAGAGTCCTGGCCATGGGG +
Preference number: 4 (lower is better)
Translates to: VGLVLGTRCLMGSSKRPACSGGA*RVLAMG
Trigger: CCCCATGGCCAGGACTCTCCAGGCCCCACCAGAGCA...GGCAGGACGCTTGCTGGAACCCATCAGACACCTGGTCCCCAAAACCAGACCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR TCA 90 bp GGTGGGTCTGGTTTTGGGGACCAGGTGTCTGATGGGTTCCAGCAAGCGTCCTGCACTGAGGGGAGCGGGTaGGGTCGGCACCATCTAAGG +
Preference number: 4 (lower is better)
Translates to: GGSGFGDQVSDGFQQASCTEGSG*GRHHLR
Trigger: CCTTAGATGGTGCCGACCTCACCCGCTCCCCTCAGT...GCAGGACGCTTGCTGGAACCCATCAGACACCTGGTCCCCAAAACCAGACCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR TCA 90 bp CCAGCACAGTCACTTTGCGTCTGTGGGGAGAAGCGGCATGCCTGTGCGCCACTGTCCTGGCACTTCCACTaGTTGGGTGGAGGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: PAQSLCVCGEKRHACAPLSWHFH*LGGGGW
Trigger: CCACCCACCTCCACCCAATCAGTGGAAGTGCCAGGA...CAGTGGCGCACAGGCATGCCGCTTCTCCCCACAGACGCAAAGTGACTGTGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR GCA 90 bp TCTGGTTTTGGGGACCAGGTGTCTGATGGGTTCCAGCAAGCGTCCTGCCCACCACGCCTGGTGGGAGACTaGTGGGGTCACCATCCGCAG +
Preference number: 4 (lower is better)
Translates to: SGFGDQVSDGFQQASCPPRLVGD*WGHHPQ
Trigger: CTGCGGATGGTGACCCCAGCAGTCTCCCACCAGGCG...TGGTGGGCAGGACGCTTGCTGGAACCCATCAGACACCTGGTCCCCAAAACCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR GCA 90 bp TTCCTGGCACTTCCACTGATTGGGTGGAGGTGGGTGGGTCTGGTTTTGGGGACCTGGGGAGAAGCGGCATaGCTGTGCGCCACTGAGGGG +
Preference number: 4 (lower is better)
Translates to: FLALPLIGWRWVGLVLGTWGEAA*LCATEG
Trigger: CCCCTCAGTGGCGCACAGGCATGCCGCTTCTCCCCA...GGTCCCCAAAACCAGACCCACCCACCTCCACCCAATCAGTGGAAGTGCCAGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR GCA 90 bp ATTGGGTGGAGGTGGGTGGGTCTGGTTTTGGGGACCAGGTGTCTGATGGGTTCCTGGGGAGAAGCGGCATaGCTGTGCGCCACTGAGGGG +
Preference number: 4 (lower is better)
Translates to: IGWRWVGLVLGTRCLMGSWGEAA*LCATEG
Trigger: CCCCTCAGTGGCGCACAGGCATGCCGCTTCTCCCCA...GGAACCCATCAGACACCTGGTCCCCAAAACCAGACCCACCCACCTCCACCCAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR GCA 90 bp TCACTTTGCGTCTGTGGGGAGAAGCGGCATGCCTGTGCGCCACTGAGGGGAGCGCTGGCCATGGGGATCTaGTGGATGCCAGCACAGTCA +
Preference number: 4 (lower is better)
Translates to: SLCVCGEKRHACAPLRGALAMGI*WMPAQS
Trigger: TGACTGTGCTGGCATCCAGCAGATCCCCATGGCCAG...CGCTCCCCTCAGTGGCGCACAGGCATGCCGCTTCTCCCCACAGACGCAAAGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR GCA 90 bp GTGTCTGATGGGTTCCAGCAAGCGTCCTGCCCACCACAGTTGTCTGCTCTGGTGACTCCGTTGGTGACCTaGAGGCACCAGCCCGGGGTC +
Preference number: 4 (lower is better)
Translates to: VSDGFQQASCPPQLSALVTPLVT*RHQPGV
Trigger: GACCCCGGGCTGGTGCCTGCAGGTCACCAACGGAGT...CACCAGAGCAGACAACTGTGGTGGGCAGGACGCTTGCTGGAACCCATCAGACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618744.4
CDS-3UTR CCA 90 bp GTGGAGGTGGGTGGGTCTGGTTTTGGGGACCAGGTGTCTGATGGGTTCCAGCAACCCTCTAGCGCCTGGTaGGAGACTGCTGGGGTCACC +
Preference number: 4 (lower is better)
Translates to: VEVGGSGFGDQVSDGFQQPSSAW*ETAGVT
Trigger: GGTGACCCCAGCAGTCTCCCACCAGGCGCTAGAGGG...TTGCTGGAACCCATCAGACACCTGGTCCCCAAAACCAGACCCACCCACCTCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CCA 90 bp TCACTTTGCGTCTGTGGGGAGAAGCGGCATGCCTGTGCGCCACTGAGGGGAGCGGTCACTTTGCGTCTGTaGGGAGAAGCGGCATGCCTG +
Preference number: 4 (lower is better)
Translates to: SLCVCGEKRHACAPLRGAVTLRL*GEAACL
Trigger: CAGGCATGCCGCTTCTCCCCACAGACGCAAAGTGAC...CGCTCCCCTCAGTGGCGCACAGGCATGCCGCTTCTCCCCACAGACGCAAAGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CCA 90 bp TGGGTGGAGGTGGGTGGGTCTGGTTTTGGGGACCAGGTGTCTGATGGGTTCCAGGGGCCTGGAGAGTCCTaGCCATGGGGATCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: WVEVGGSGFGDQVSDGFQGPGES*PWGSAG
Trigger: TCCAGCAGATCCCCATGGCCAGGACTCTCCAGGCCC...CTGGAACCCATCAGACACCTGGTCCCCAAAACCAGACCCACCCACCTCCACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CCA 90 bp GTGTCTGATGGGTTCCAGCAAGCGTCCTGCCCACCACAGTTGTCTGCTCTGGTGTGCTCTGGTGGGGCCTaGAGAGTCCTGGCCATGGGG +
Preference number: 4 (lower is better)
Translates to: VSDGFQQASCPPQLSALVCSGGA*RVLAMG
Trigger: CCCCATGGCCAGGACTCTCCAGGCCCCACCAGAGCA...CACCAGAGCAGACAACTGTGGTGGGCAGGACGCTTGCTGGAACCCATCAGACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CCA 90 bp TCACTTTGCGTCTGTGGGGAGAAGCGGCATGCCTGTGCGCCACTGAGGGGAGCGTTGGGTGGAGGTGGGTaGGTCTGGTTTTGGGGACCA +
Preference number: 4 (lower is better)
Translates to: SLCVCGEKRHACAPLRGALGGGG*VWFWGP
Trigger: TGGTCCCCAAAACCAGACCCACCCACCTCCACCCAA...CGCTCCCCTCAGTGGCGCACAGGCATGCCGCTTCTCCCCACAGACGCAAAGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR TCA 90 bp CTGATGGGTTCCAGCAAGCGTCCTGCCCACCACAGTTGTCTGCTCTGGTGGGGCGCAGTTCACCGTGGGTaGGAAGTCGCTGCTCTGGAT +
Preference number: 4 (lower is better)
Translates to: LMGSSKRPAHHSCLLWWGAVHRG*EVAALD
Trigger: ATCCAGAGCAGCGACTTCTCACCCACGGTGAACTGC...GCCCCACCAGAGCAGACAACTGTGGTGGGCAGGACGCTTGCTGGAACCCATCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR TCA 90 bp ATTGGGTGGAGGTGGGTGGGTCTGGTTTTGGGGACCAGGTGTCTGATGGGTTCCACTGAGGGGAGCGGGTaGGGTCGGCACCATCTAAGG +
Preference number: 4 (lower is better)
Translates to: IGWRWVGLVLGTRCLMGSTEGSG*GRHHLR
Trigger: CCTTAGATGGTGCCGACCTCACCCGCTCCCCTCAGT...GGAACCCATCAGACACCTGGTCCCCAAAACCAGACCCACCCACCTCCACCCAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR TCA 90 bp TTTCCTGGCACTTCCACTGATTGGGTGGAGGTGGGTGGGTCTGGTTTTGGGGACTCCACACTCCGTTGGTaGCCTGCAGGCACCAGCCCG +
Preference number: 4 (lower is better)
Translates to: FPGTSTDWVEVGGSGFGDSTLRW*PAGTSP
Trigger: CGGGCTGGTGCCTGCAGGTCACCAACGGAGTGTGGA...GTCCCCAAAACCAGACCCACCCACCTCCACCCAATCAGTGGAAGTGCCAGGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618744.4
CDS-3UTR GCA 90 bp TCCACTGATTGGGTGGAGGTGGGTGGGTCTGGTTTTGGGGACCAGGTGTCTGATCGCCTGGTGGGAGACTaGTGGGGTCACCATCCGCAG +
Preference number: 4 (lower is better)
Translates to: STDWVEVGGSGFGDQVSDRLVGD*WGHHPQ
Trigger: CTGCGGATGGTGACCCCAGCAGTCTCCCACCAGGCG...ATCAGACACCTGGTCCCCAAAACCAGACCCACCCACCTCCACCCAATCAGTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR GCA 90 bp TGCCAGCACAGTCACTTTGCGTCTGTGGGGAGAAGCGGCATGCCTGTGCGCCACCCAGCACAGTCACTTTaGGTCTGTGGGGAGAAGCGG +
Preference number: 4 (lower is better)
Translates to: CQHSHFASVGRSGMPVRHPAQSL*VCGEKR
Trigger: CCGCTTCTCCCCACAGACGCAAAGTGACTGTGCTGG...GTGGCGCACAGGCATGCCGCTTCTCCCCACAGACGCAAAGTGACTGTGCTGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR GCA 90 bp CCAGCACAGTCACTTTGCGTCTGTGGGGAGAAGCGGCATGCCTGTGCGCCACTGCTGGCCATGGGGATCTaGTGGATGCCAGCACAGTCA +
Preference number: 4 (lower is better)
Translates to: PAQSLCVCGEKRHACAPLLAMGI*WMPAQS
Trigger: TGACTGTGCTGGCATCCAGCAGATCCCCATGGCCAG...CAGTGGCGCACAGGCATGCCGCTTCTCCCCACAGACGCAAAGTGACTGTGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CCA 90 bp CCTGGCACTTCCACTGATTGGGTGGAGGTGGGTGGGTCTGGTTTTGGGGACCAGAGTCACAGGAGGCGCTaGCGAAGAGGTGGCCATCAG +
Preference number: 4 (lower is better)
Translates to: PGTSTDWVEVGGSGFGDQSHRRR*RRGGHQ
Trigger: CTGATGGCCACCTCTTCGCCAGCGCCTCCTGTGACT...CTGGTCCCCAAAACCAGACCCACCCACCTCCACCCAATCAGTGGAAGTGCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373574.2
ENST00000613760.4
CDS-3UTR CCA 90 bp TGGATGCCAGCACAGTCACTTTGCGTCTGTGGGGAGAAGCGGCATGCCTGTGCGAAGAGGCGCAGCATCTaGCCGGACTGCACATCCCAG +
Preference number: 4 (lower is better)
Translates to: WMPAQSLCVCGEKRHACAKRRSI*PDCTSQ
Trigger: CTGGGATGTGCAGTCCGGCCAGATGCTGCGCCTCTT...CGCACAGGCATGCCGCTTCTCCCCACAGACGCAAAGTGACTGTGCTGGCATCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CCA 90 bp GAGGTGGGTGGGTCTGGTTTTGGGGACCAGGTGTCTGATGGGTTCCAGCAAGCGAAGAGGCGCAGCATCTaGCCGGACTGCACATCCCAG +
Preference number: 4 (lower is better)
Translates to: EVGGSGFGDQVSDGFQQAKRRSI*PDCTSQ
Trigger: CTGGGATGTGCAGTCCGGCCAGATGCTGCGCCTCTT...CGCTTGCTGGAACCCATCAGACACCTGGTCCCCAAAACCAGACCCACCCACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CCA 90 bp GTGGGTGGGTCTGGTTTTGGGGACCAGGTGTCTGATGGGTTCCAGCAAGCGTCCAAGAGGCGCAGCATCTaGCCGGACTGCACATCCCAG +
Preference number: 4 (lower is better)
Translates to: VGGSGFGDQVSDGFQQASKRRSI*PDCTSQ
Trigger: CTGGGATGTGCAGTCCGGCCAGATGCTGCGCCTCTT...GGACGCTTGCTGGAACCCATCAGACACCTGGTCCCCAAAACCAGACCCACCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CCA 90 bp CCAGCACAGTCACTTTGCGTCTGTGGGGAGAAGCGGCATGCCTGTGCGCCACTGGAGAAGTCGCTGCTCTaGATGGAGTCACGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: PAQSLCVCGEKRHACAPLEKSLL*MESRCP
Trigger: TGGGCACCGTGACTCCATCCAGAGCAGCGACTTCTC...CAGTGGCGCACAGGCATGCCGCTTCTCCCCACAGACGCAAAGTGACTGTGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CCA 90 bp AGGTGTCTGATGGGTTCCAGCAAGCGTCCTGCCCACCACAGTTGTCTGCTCTGGCTGGTGGGAGACTGCTaGGGTCACCATCCGCAGGTC +
Preference number: 4 (lower is better)
Translates to: RCLMGSSKRPAHHSCLLWLVGDC*GHHPQV
Trigger: GACCTGCGGATGGTGACCCCAGCAGTCTCCCACCAG...CCAGAGCAGACAACTGTGGTGGGCAGGACGCTTGCTGGAACCCATCAGACACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CCA 90 bp TTTGGGGACCAGGTGTCTGATGGGTTCCAGCAAGCGTCCTGCCCACCACAGTTGCTGGTGGGAGACTGCTaGGGTCACCATCCGCAGGTC +
Preference number: 4 (lower is better)
Translates to: FGDQVSDGFQQASCPPQLLVGDC*GHHPQV
Trigger: GACCTGCGGATGGTGACCCCAGCAGTCTCCCACCAG...CAACTGTGGTGGGCAGGACGCTTGCTGGAACCCATCAGACACCTGGTCCCCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CCA 90 bp TCTGGTTTTGGGGACCAGGTGTCTGATGGGTTCCAGCAAGCGTCCTGCCCACCATGTCCCTCTAGCGCCTaGTGGGAGACTGCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: SGFGDQVSDGFQQASCPPCPSSA*WETAGV
Trigger: GACCCCAGCAGTCTCCCACCAGGCGCTAGAGGGACA...TGGTGGGCAGGACGCTTGCTGGAACCCATCAGACACCTGGTCCCCAAAACCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CCA 90 bp CTGATGGGTTCCAGCAAGCGTCCTGCCCACCACAGTTGTCTGCTCTGGTGGGGCGCTTCCAGATGTGGATaGTCTTGTCCCAGGAGCCGG +
Preference number: 4 (lower is better)
Translates to: LMGSSKRPAHHSCLLWWGASRCG*SCPRSR
Trigger: CCGGCTCCTGGGACAAGACCATCCACATCTGGAAGC...GCCCCACCAGAGCAGACAACTGTGGTGGGCAGGACGCTTGCTGGAACCCATCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CCA 90 bp TCTGATGGGTTCCAGCAAGCGTCCTGCCCACCACAGTTGTCTGCTCTGGTGGGGGGAGAGTCCTGGCCATaGGGATCTGCTGGATGCCAG +
Preference number: 4 (lower is better)
Translates to: SDGFQQASCPPQLSALVGGESWP*GSAGCQ
Trigger: CTGGCATCCAGCAGATCCCCATGGCCAGGACTCTCC...CCCCACCAGAGCAGACAACTGTGGTGGGCAGGACGCTTGCTGGAACCCATCAGA
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CCA 90 bp GCTGGATGCCAGCACAGTCACTTTGCGTCTGTGGGGAGAAGCGGCATGCCTGTGGGAGAGTCCTGGCCATaGGGATCTGCTGGATGCCAG +
Preference number: 4 (lower is better)
Translates to: AGCQHSHFASVGRSGMPVGESWP*GSAGCQ
Trigger: CTGGCATCCAGCAGATCCCCATGGCCAGGACTCTCC...CACAGGCATGCCGCTTCTCCCCACAGACGCAAAGTGACTGTGCTGGCATCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CCA 90 bp GTGTCTGATGGGTTCCAGCAAGCGTCCTGCCCACCACAGTTGTCTGCTCTGGTGGGGCCTGGAGAGTCCTaGCCATGGGGATCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: VSDGFQQASCPPQLSALVGPGES*PWGSAG
Trigger: TCCAGCAGATCCCCATGGCCAGGACTCTCCAGGCCC...CACCAGAGCAGACAACTGTGGTGGGCAGGACGCTTGCTGGAACCCATCAGACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CCA 90 bp TGCCAGCACAGTCACTTTGCGTCTGTGGGGAGAAGCGGCATGCCTGTGCGCCACGGCACTTCCACTGATTaGGTGGAGGTGGGTGGGTCT +
Preference number: 4 (lower is better)
Translates to: CQHSHFASVGRSGMPVRHGTSTD*VEVGGS
Trigger: AGACCCACCCACCTCCACCCAATCAGTGGAAGTGCC...GTGGCGCACAGGCATGCCGCTTCTCCCCACAGACGCAAAGTGACTGTGCTGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CCA 90 bp GTGGGTGGGTCTGGTTTTGGGGACCAGGTGTCTGATGGGTTCCAGCAAGCGTCCCGGGGTCGGGGAAGGTaGAAAGGTGACGTGACACAG +
Preference number: 4 (lower is better)
Translates to: VGGSGFGDQVSDGFQQASRGRGR*KGDVTQ
Trigger: CTGTGTCACGTCACCTTTCCACCTTCCCCGACCCCG...GGACGCTTGCTGGAACCCATCAGACACCTGGTCCCCAAAACCAGACCCACCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000618744.4
CDS-3UTR TCA 90 bp GTGGGTCTGGTTTTGGGGACCAGGTGTCTGATGGGTTCCAGCAAGCGTCCTGCCCACGCAGCCATCTTCTaGGCCTGTGAGCAGCATCTG +
Preference number: 4 (lower is better)
Translates to: VGLVLGTRCLMGSSKRPAHAAIF*ACEQHL
Trigger: CAGATGCTGCTCACAGGCTCAGAAGATGGCTGCGTG...GGCAGGACGCTTGCTGGAACCCATCAGACACCTGGTCCCCAAAACCAGACCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR TCA 90 bp GTGGGTGGGTCTGGTTTTGGGGACCAGGTGTCTGATGGGTTCCAGCAAGCGTCCGCAGTTCACCGTGGGTaGGAAGTCGCTGCTCTGGAT +
Preference number: 4 (lower is better)
Translates to: VGGSGFGDQVSDGFQQASAVHRG*EVAALD
Trigger: ATCCAGAGCAGCGACTTCTCACCCACGGTGAACTGC...GGACGCTTGCTGGAACCCATCAGACACCTGGTCCCCAAAACCAGACCCACCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR TCA 90 bp TTTCCTGGCACTTCCACTGATTGGGTGGAGGTGGGTGGGTCTGGTTTTGGGGACACTGAGGGGAGCGGGTaGGGTCGGCACCATCTAAGG +
Preference number: 4 (lower is better)
Translates to: FPGTSTDWVEVGGSGFGDTEGSG*GRHHLR
Trigger: CCTTAGATGGTGCCGACCTCACCCGCTCCCCTCAGT...GTCCCCAAAACCAGACCCACCCACCTCCACCCAATCAGTGGAAGTGCCAGGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR TCA 90 bp ATTGGGTGGAGGTGGGTGGGTCTGGTTTTGGGGACCAGGTGTCTGATGGGTTCCTCCTGGCACTTCCACTaGTTGGGTGGAGGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: IGWRWVGLVLGTRCLMGSSWHFH*LGGGGW
Trigger: CCACCCACCTCCACCCAATCAGTGGAAGTGCCAGGA...GGAACCCATCAGACACCTGGTCCCCAAAACCAGACCCACCCACCTCCACCCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR GCA 90 bp GCTGGATGCCAGCACAGTCACTTTGCGTCTGTGGGGAGAAGCGGCATGCCTGTGCCAGCACAGTCACTTTaGGTCTGTGGGGAGAAGCGG +
Preference number: 4 (lower is better)
Translates to: AGCQHSHFASVGRSGMPVPAQSL*VCGEKR
Trigger: CCGCTTCTCCCCACAGACGCAAAGTGACTGTGCTGG...CACAGGCATGCCGCTTCTCCCCACAGACGCAAAGTGACTGTGCTGGCATCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR GCA 90 bp CTGATGGGTTCCAGCAAGCGTCCTGCCCACCACAGTTGTCTGCTCTGGTGGGGCTGGGGATCTGCTGGATaGCAGCACAGTCACTTTGCG +
Preference number: 4 (lower is better)
Translates to: LMGSSKRPAHHSCLLWWGWGSAG*QHSHFA
Trigger: CGCAAAGTGACTGTGCTGGCATCCAGCAGATCCCCA...GCCCCACCAGAGCAGACAACTGTGGTGGGCAGGACGCTTGCTGGAACCCATCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR GCA 90 bp TCTGGTTTTGGGGACCAGGTGTCTGATGGGTTCCAGCAAGCGTCCTGCCCACCACCCACCACAGTTGTCTaGTCTGGTGGGGCCTGGAGA +
Preference number: 4 (lower is better)
Translates to: SGFGDQVSDGFQQASCPPPTTVV*SGGAWR
Trigger: TCTCCAGGCCCCACCAGAGCAGACAACTGTGGTGGG...TGGTGGGCAGGACGCTTGCTGGAACCCATCAGACACCTGGTCCCCAAAACCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR GCA 90 bp AGGTGTCTGATGGGTTCCAGCAAGCGTCCTGCCCACCACAGTTGTCTGCTCTGGCCCACCACAGTTGTCTaGTCTGGTGGGGCCTGGAGA +
Preference number: 4 (lower is better)
Translates to: RCLMGSSKRPAHHSCLLWPTTVV*SGGAWR
Trigger: TCTCCAGGCCCCACCAGAGCAGACAACTGTGGTGGG...CCAGAGCAGACAACTGTGGTGGGCAGGACGCTTGCTGGAACCCATCAGACACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CCA 90 bp GCTGGATGCCAGCACAGTCACTTTGCGTCTGTGGGGAGAAGCGGCATGCCTGTGACCTCCCCGCCGTGCTaGCCGAAGAATTTCACTCTC +
Preference number: 4 (lower is better)
Translates to: AGCQHSHFASVGRSGMPVTSPPC*PKNFTL
Trigger: GAGAGTGAAATTCTTCGGCCAGCACGGCGGGGAGGT...CACAGGCATGCCGCTTCTCCCCACAGACGCAAAGTGACTGTGCTGGCATCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CCA 90 bp GTGGGTGGGTCTGGTTTTGGGGACCAGGTGTCTGATGGGTTCCAGCAAGCGTCCCCTGTGAGCAGCATCTaGCCATCAGGGGAGAAGGCA +
Preference number: 4 (lower is better)
Translates to: VGGSGFGDQVSDGFQQASPVSSI*PSGEKA
Trigger: TGCCTTCTCCCCTGATGGCCAGATGCTGCTCACAGG...GGACGCTTGCTGGAACCCATCAGACACCTGGTCCCCAAAACCAGACCCACCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CCA 90 bp TCTGGTTTTGGGGACCAGGTGTCTGATGGGTTCCAGCAAGCGTCCTGCCCACCAAGTCACAGGAGGCGCTaGCGAAGAGGTGGCCATCAG +
Preference number: 4 (lower is better)
Translates to: SGFGDQVSDGFQQASCPPSHRRR*RRGGHQ
Trigger: CTGATGGCCACCTCTTCGCCAGCGCCTCCTGTGACT...TGGTGGGCAGGACGCTTGCTGGAACCCATCAGACACCTGGTCCCCAAAACCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373574.2
ENST00000613760.4
CDS-3UTR CCA 90 bp GGTGGGTCTGGTTTTGGGGACCAGGTGTCTGATGGGTTCCAGCAAGCGTCCTGCGAGAAGTCGCTGCTCTaGATGGAGTCACGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: GGSGFGDQVSDGFQQASCEKSLL*MESRCP
Trigger: TGGGCACCGTGACTCCATCCAGAGCAGCGACTTCTC...GCAGGACGCTTGCTGGAACCCATCAGACACCTGGTCCCCAAAACCAGACCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CCA 90 bp TGGATGCCAGCACAGTCACTTTGCGTCTGTGGGGAGAAGCGGCATGCCTGTGCGCCAGGCAGTTCACCGTaGGTGAGAAGTCGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: WMPAQSLCVCGEKRHACAPGSSP*VRSRCS
Trigger: AGAGCAGCGACTTCTCACCCACGGTGAACTGCCTGG...CGCACAGGCATGCCGCTTCTCCCCACAGACGCAAAGTGACTGTGCTGGCATCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CCA 90 bp GGTGGGTCTGGTTTTGGGGACCAGGTGTCTGATGGGTTCCAGCAAGCGTCCTGCCCAGGCAGTTCACCGTaGGTGAGAAGTCGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: GGSGFGDQVSDGFQQASCPGSSP*VRSRCS
Trigger: AGAGCAGCGACTTCTCACCCACGGTGAACTGCCTGG...GCAGGACGCTTGCTGGAACCCATCAGACACCTGGTCCCCAAAACCAGACCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CCA 90 bp TTTCCTGGCACTTCCACTGATTGGGTGGAGGTGGGTGGGTCTGGTTTTGGGGACCTGGTGGGAGACTGCTaGGGTCACCATCCGCAGGTC +
Preference number: 4 (lower is better)
Translates to: FPGTSTDWVEVGGSGFGDLVGDC*GHHPQV
Trigger: GACCTGCGGATGGTGACCCCAGCAGTCTCCCACCAG...GTCCCCAAAACCAGACCCACCCACCTCCACCCAATCAGTGGAAGTGCCAGGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CCA 90 bp TTTCCTGGCACTTCCACTGATTGGGTGGAGGTGGGTGGGTCTGGTTTTGGGGACTGTCCCTCTAGCGCCTaGTGGGAGACTGCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: FPGTSTDWVEVGGSGFGDCPSSA*WETAGV
Trigger: GACCCCAGCAGTCTCCCACCAGGCGCTAGAGGGACA...GTCCCCAAAACCAGACCCACCCACCTCCACCCAATCAGTGGAAGTGCCAGGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CCA 90 bp TCTGATGGGTTCCAGCAAGCGTCCTGCCCACCACAGTTGTCTGCTCTGGTGGGGGCAGGCTGCTGGTTGTaGGCTTCCAGATGTGGATGG +
Preference number: 4 (lower is better)
Translates to: SDGFQQASCPPQLSALVGAGCWL*ASRCGW
Trigger: CCATCCACATCTGGAAGCCCACAACCAGCAGCCTGC...CCCCACCAGAGCAGACAACTGTGGTGGGCAGGACGCTTGCTGGAACCCATCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CCA 90 bp TCTGGTTTTGGGGACCAGGTGTCTGATGGGTTCCAGCAAGCGTCCTGCCCACCAGTGAAGGCACAGGTGTaGGCCACATCCAGGACTCCC +
Preference number: 4 (lower is better)
Translates to: SGFGDQVSDGFQQASCPPVKAQV*ATSRTP
Trigger: GGGAGTCCTGGATGTGGCCCACACCTGTGCCTTCAC...TGGTGGGCAGGACGCTTGCTGGAACCCATCAGACACCTGGTCCCCAAAACCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CCA 90 bp CTGGATGCCAGCACAGTCACTTTGCGTCTGTGGGGAGAAGCGGCATGCCTGTGCAGGTTTGAGGGTCCCTaGGTGATTTGGACGTGCGGG +
Preference number: 4 (lower is better)
Translates to: LDASTVTLRLWGEAACLCRFEGP*VIWTCG
Trigger: CCCGCACGTCCAAATCACCCAGGGACCCTCAAACCT...GCACAGGCATGCCGCTTCTCCCCACAGACGCAAAGTGACTGTGCTGGCATCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CCA 90 bp GAGGTGGGTGGGTCTGGTTTTGGGGACCAGGTGTCTGATGGGTTCCAGCAAGCGGTCACTTTGCGTCTGTaGGGAGAAGCGGCATGCCTG +
Preference number: 4 (lower is better)
Translates to: EVGGSGFGDQVSDGFQQAVTLRL*GEAACL
Trigger: CAGGCATGCCGCTTCTCCCCACAGACGCAAAGTGAC...CGCTTGCTGGAACCCATCAGACACCTGGTCCCCAAAACCAGACCCACCCACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CCA 90 bp TGCCAGCACAGTCACTTTGCGTCTGTGGGGAGAAGCGGCATGCCTGTGCGCCACGCCATGGGGATCTGCTaGATGCCAGCACAGTCACTT +
Preference number: 4 (lower is better)
Translates to: CQHSHFASVGRSGMPVRHAMGIC*MPAQSL
Trigger: AAGTGACTGTGCTGGCATCCAGCAGATCCCCATGGC...GTGGCGCACAGGCATGCCGCTTCTCCCCACAGACGCAAAGTGACTGTGCTGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CCA 90 bp GGTGGGTCTGGTTTTGGGGACCAGGTGTCTGATGGGTTCCAGCAAGCGTCCTGCTTGGGTGGAGGTGGGTaGGTCTGGTTTTGGGGACCA +
Preference number: 4 (lower is better)
Translates to: GGSGFGDQVSDGFQQASCLGGGG*VWFWGP
Trigger: TGGTCCCCAAAACCAGACCCACCCACCTCCACCCAA...GCAGGACGCTTGCTGGAACCCATCAGACACCTGGTCCCCAAAACCAGACCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CCA 90 bp CTGGATGCCAGCACAGTCACTTTGCGTCTGTGGGGAGAAGCGGCATGCCTGTGCTTGGGTGGAGGTGGGTaGGTCTGGTTTTGGGGACCA +
Preference number: 4 (lower is better)
Translates to: LDASTVTLRLWGEAACLCLGGGG*VWFWGP
Trigger: TGGTCCCCAAAACCAGACCCACCCACCTCCACCCAA...GCACAGGCATGCCGCTTCTCCCCACAGACGCAAAGTGACTGTGCTGGCATCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CCA 90 bp TGGATGCCAGCACAGTCACTTTGCGTCTGTGGGGAGAAGCGGCATGCCTGTGCGGGCACTTCCACTGATTaGGTGGAGGTGGGTGGGTCT +
Preference number: 4 (lower is better)
Translates to: WMPAQSLCVCGEKRHACAGTSTD*VEVGGS
Trigger: AGACCCACCCACCTCCACCCAATCAGTGGAAGTGCC...CGCACAGGCATGCCGCTTCTCCCCACAGACGCAAAGTGACTGTGCTGGCATCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CCA 90 bp GGTGGGTCTGGTTTTGGGGACCAGGTGTCTGATGGGTTCCAGCAAGCGTCCTGCGGCACTTCCACTGATTaGGTGGAGGTGGGTGGGTCT +
Preference number: 4 (lower is better)
Translates to: GGSGFGDQVSDGFQQASCGTSTD*VEVGGS
Trigger: AGACCCACCCACCTCCACCCAATCAGTGGAAGTGCC...GCAGGACGCTTGCTGGAACCCATCAGACACCTGGTCCCCAAAACCAGACCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR TCA 90 bp ACCAGGTGTCTGATGGGTTCCAGCAAGCGTCCTGCCCACCACAGTTGTCTGCTCCACGCAGCCATCTTCTaGGCCTGTGAGCAGCATCTG +
Preference number: 4 (lower is better)
Translates to: TRCLMGSSKRPAHHSCLLHAAIF*ACEQHL
Trigger: CAGATGCTGCTCACAGGCTCAGAAGATGGCTGCGTG...GAGCAGACAACTGTGGTGGGCAGGACGCTTGCTGGAACCCATCAGACACCTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR TCA 90 bp TCTGGTTTTGGGGACCAGGTGTCTGATGGGTTCCAGCAAGCGTCCTGCCCACCACAGGAGGCCGGATGCTaGATAGCACAGGCAGCTGAT +
Preference number: 4 (lower is better)
Translates to: SGFGDQVSDGFQQASCPPQEAGC*IAQAAD
Trigger: ATCAGCTGCCTGTGCTATTCAGCATCCGGCCTCCTG...TGGTGGGCAGGACGCTTGCTGGAACCCATCAGACACCTGGTCCCCAAAACCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR TCA 90 bp TTTGGGGACCAGGTGTCTGATGGGTTCCAGCAAGCGTCCTGCCCACCACAGTTGCAGGAGGCCGGATGCTaGATAGCACAGGCAGCTGAT +
Preference number: 4 (lower is better)
Translates to: FGDQVSDGFQQASCPPQLQEAGC*IAQAAD
Trigger: ATCAGCTGCCTGTGCTATTCAGCATCCGGCCTCCTG...CAACTGTGGTGGGCAGGACGCTTGCTGGAACCCATCAGACACCTGGTCCCCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR TCA 90 bp GAGGTGGGTGGGTCTGGTTTTGGGGACCAGGTGTCTGATGGGTTCCAGCAAGCGTGCTCTTCACCCAGGTaGCATGGCCCTTCAGTTGGA +
Preference number: 4 (lower is better)
Translates to: EVGGSGFGDQVSDGFQQACSSPR*HGPSVG
Trigger: TCCAACTGAAGGGCCATGTCACCTGGGTGAAGAGCA...CGCTTGCTGGAACCCATCAGACACCTGGTCCCCAAAACCAGACCCACCCACCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR TCA 90 bp TGGATGCCAGCACAGTCACTTTGCGTCTGTGGGGAGAAGCGGCATGCCTGTGCGTGCTCTTCACCCAGGTaGCATGGCCCTTCAGTTGGA +
Preference number: 4 (lower is better)
Translates to: WMPAQSLCVCGEKRHACACSSPR*HGPSVG
Trigger: TCCAACTGAAGGGCCATGTCACCTGGGTGAAGAGCA...CGCACAGGCATGCCGCTTCTCCCCACAGACGCAAAGTGACTGTGCTGGCATCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR TCA 90 bp AGGTGGGTGGGTCTGGTTTTGGGGACCAGGTGTCTGATGGGTTCCAGCAAGCGTGGGAAGGTGGAAAGGTaGCGTGACACAGGACACAGC +
Preference number: 4 (lower is better)
Translates to: RWVGLVLGTRCLMGSSKRGKVER*RDTGHS
Trigger: GCTGTGTCCTGTGTCACGTCACCTTTCCACCTTCCC...ACGCTTGCTGGAACCCATCAGACACCTGGTCCCCAAAACCAGACCCACCCACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618744.4
CDS-3UTR GCA 90 bp TGGATGCCAGCACAGTCACTTTGCGTCTGTGGGGAGAAGCGGCATGCCTGTGCGTTGACCTCCCCGCCGTaGTGGCCGAAGAATTTCACT +
Preference number: 4 (lower is better)
Translates to: WMPAQSLCVCGEKRHACALTSPP*WPKNFT
Trigger: AGTGAAATTCTTCGGCCAGCACGGCGGGGAGGTCAA...CGCACAGGCATGCCGCTTCTCCCCACAGACGCAAAGTGACTGTGCTGGCATCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR GCA 90 bp AGGTGGGTGGGTCTGGTTTTGGGGACCAGGTGTCTGATGGGTTCCAGCAAGCGTCAGACACTTCGCTCTTaGCACATCCCACAGGCGGAC +
Preference number: 4 (lower is better)
Translates to: RWVGLVLGTRCLMGSSKRQTLRS*HIPQAD
Trigger: GTCCGCCTGTGGGATGTGGCAAGAGCGAAGTGTCTG...ACGCTTGCTGGAACCCATCAGACACCTGGTCCCCAAAACCAGACCCACCCACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373574.2
ENST00000613760.4
CDS-3UTR GCA 90 bp GTGTCTGATGGGTTCCAGCAAGCGTCCTGCCCACCACAGTTGTCTGCTCTGGTGAGCATCTGGCCGGACTaGACATCCCAGAGCATCACC +
Preference number: 4 (lower is better)
Translates to: VSDGFQQASCPPQLSALVSIWPD*TSQSIT
Trigger: GGTGATGCTCTGGGATGTGCAGTCCGGCCAGATGCT...CACCAGAGCAGACAACTGTGGTGGGCAGGACGCTTGCTGGAACCCATCAGACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR GCA 90 bp ATTGGGTGGAGGTGGGTGGGTCTGGTTTTGGGGACCAGGTGTCTGATGGGTTCCAGCATCTGGCCGGACTaGACATCCCAGAGCATCACC +
Preference number: 4 (lower is better)
Translates to: IGWRWVGLVLGTRCLMGSSIWPD*TSQSIT
Trigger: GGTGATGCTCTGGGATGTGCAGTCCGGCCAGATGCT...GGAACCCATCAGACACCTGGTCCCCAAAACCAGACCCACCCACCTCCACCCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR GCA 90 bp TTCCTGGCACTTCCACTGATTGGGTGGAGGTGGGTGGGTCTGGTTTTGGGGACCTGGATGGAGTCACGGTaGCCAACTAAGAGGCGCAGC +
Preference number: 4 (lower is better)
Translates to: FLALPLIGWRWVGLVLGTWMESR*PTKRRS
Trigger: GCTGCGCCTCTTAGTTGGGCACCGTGACTCCATCCA...GGTCCCCAAAACCAGACCCACCCACCTCCACCCAATCAGTGGAAGTGCCAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR GCA 90 bp GTGGGTCTGGTTTTGGGGACCAGGTGTCTGATGGGTTCCAGCAAGCGTCCTGCCTGGGTGAGAAGTCGCTaGTCTGGATGGAGTCACGGT +
Preference number: 4 (lower is better)
Translates to: VGLVLGTRCLMGSSKRPAWVRSR*SGWSHG
Trigger: ACCGTGACTCCATCCAGAGCAGCGACTTCTCACCCA...GGCAGGACGCTTGCTGGAACCCATCAGACACCTGGTCCCCAAAACCAGACCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR GCA 90 bp TGGATGCCAGCACAGTCACTTTGCGTCTGTGGGGAGAAGCGGCATGCCTGTGCGTTCCAGCAAGCGTCCTaGCCACCACAGTTGTCTGCT +
Preference number: 4 (lower is better)
Translates to: WMPAQSLCVCGEKRHACAFQQAS*PPQLSA
Trigger: AGCAGACAACTGTGGTGGGCAGGACGCTTGCTGGAA...CGCACAGGCATGCCGCTTCTCCCCACAGACGCAAAGTGACTGTGCTGGCATCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CCA 90 bp TCTGGTTTTGGGGACCAGGTGTCTGATGGGTTCCAGCAAGCGTCCTGCCCACCACCTGTGAGCAGCATCTaGCCATCAGGGGAGAAGGCA +
Preference number: 4 (lower is better)
Translates to: SGFGDQVSDGFQQASCPPPVSSI*PSGEKA
Trigger: TGCCTTCTCCCCTGATGGCCAGATGCTGCTCACAGG...TGGTGGGCAGGACGCTTGCTGGAACCCATCAGACACCTGGTCCCCAAAACCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CCA 90 bp GTGTCTGATGGGTTCCAGCAAGCGTCCTGCCCACCACAGTTGTCTGCTCTGGTGCCTGTGAGCAGCATCTaGCCATCAGGGGAGAAGGCA +
Preference number: 4 (lower is better)
Translates to: VSDGFQQASCPPQLSALVPVSSI*PSGEKA
Trigger: TGCCTTCTCCCCTGATGGCCAGATGCTGCTCACAGG...CACCAGAGCAGACAACTGTGGTGGGCAGGACGCTTGCTGGAACCCATCAGACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CCA 90 bp TGCTGGATGCCAGCACAGTCACTTTGCGTCTGTGGGGAGAAGCGGCATGCCTGTGAGAAGTCGCTGCTCTaGATGGAGTCACGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: CWMPAQSLCVCGEKRHACEKSLL*MESRCP
Trigger: TGGGCACCGTGACTCCATCCAGAGCAGCGACTTCTC...ACAGGCATGCCGCTTCTCCCCACAGACGCAAAGTGACTGTGCTGGCATCCAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CCA 90 bp TGCTGGATGCCAGCACAGTCACTTTGCGTCTGTGGGGAGAAGCGGCATGCCTGTGCTTCCAGATGTGGATaGTCTTGTCCCAGGAGCCGG +
Preference number: 4 (lower is better)
Translates to: CWMPAQSLCVCGEKRHACASRCG*SCPRSR
Trigger: CCGGCTCCTGGGACAAGACCATCCACATCTGGAAGC...ACAGGCATGCCGCTTCTCCCCACAGACGCAAAGTGACTGTGCTGGCATCCAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CCA 90 bp AGGTGTCTGATGGGTTCCAGCAAGCGTCCTGCCCACCACAGTTGTCTGCTCTGGGCTTCCAGATGTGGATaGTCTTGTCCCAGGAGCCGG +
Preference number: 4 (lower is better)
Translates to: RCLMGSSKRPAHHSCLLWASRCG*SCPRSR
Trigger: CCGGCTCCTGGGACAAGACCATCCACATCTGGAAGC...CCAGAGCAGACAACTGTGGTGGGCAGGACGCTTGCTGGAACCCATCAGACACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CCA 90 bp TGGGTGGAGGTGGGTGGGTCTGGTTTTGGGGACCAGGTGTCTGATGGGTTCCAGGTGGGCTTCCAGATGTaGATGGTCTTGTCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: WVEVGGSGFGDQVSDGFQVGFQM*MVLSQE
Trigger: CTCCTGGGACAAGACCATCCACATCTGGAAGCCCAC...CTGGAACCCATCAGACACCTGGTCCCCAAAACCAGACCCACCCACCTCCACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CCA 90 bp GTGGGTGGGTCTGGTTTTGGGGACCAGGTGTCTGATGGGTTCCAGCAAGCGTCCGTGGGCTTCCAGATGTaGATGGTCTTGTCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: VGGSGFGDQVSDGFQQASVGFQM*MVLSQE
Trigger: CTCCTGGGACAAGACCATCCACATCTGGAAGCCCAC...GGACGCTTGCTGGAACCCATCAGACACCTGGTCCCCAAAACCAGACCCACCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CCA 90 bp TTTGGGGACCAGGTGTCTGATGGGTTCCAGCAAGCGTCCTGCCCACCACAGTTGGCAGGCTGCTGGTTGTaGGCTTCCAGATGTGGATGG +
Preference number: 4 (lower is better)
Translates to: FGDQVSDGFQQASCPPQLAGCWL*ASRCGW
Trigger: CCATCCACATCTGGAAGCCCACAACCAGCAGCCTGC...CAACTGTGGTGGGCAGGACGCTTGCTGGAACCCATCAGACACCTGGTCCCCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CCA 90 bp AGGTGTCTGATGGGTTCCAGCAAGCGTCCTGCCCACCACAGTTGTCTGCTCTGGGCAGGCTGCTGGTTGTaGGCTTCCAGATGTGGATGG +
Preference number: 4 (lower is better)
Translates to: RCLMGSSKRPAHHSCLLWAGCWL*ASRCGW
Trigger: CCATCCACATCTGGAAGCCCACAACCAGCAGCCTGC...CCAGAGCAGACAACTGTGGTGGGCAGGACGCTTGCTGGAACCCATCAGACACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CCA 90 bp TCACTTTGCGTCTGTGGGGAGAAGCGGCATGCCTGTGCGCCACTGAGGGGAGCGTTCACCCAGGTGACATaGCCCTTCAGTTGGATAAGC +
Preference number: 4 (lower is better)
Translates to: SLCVCGEKRHACAPLRGAFTQVT*PFSWIS
Trigger: GCTTATCCAACTGAAGGGCCATGTCACCTGGGTGAA...CGCTCCCCTCAGTGGCGCACAGGCATGCCGCTTCTCCCCACAGACGCAAAGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CCA 90 bp GTGTCTGATGGGTTCCAGCAAGCGTCCTGCCCACCACAGTTGTCTGCTCTGGTGAGGTTTGAGGGTCCCTaGGTGATTTGGACGTGCGGG +
Preference number: 4 (lower is better)
Translates to: VSDGFQQASCPPQLSALVRFEGP*VIWTCG
Trigger: CCCGCACGTCCAAATCACCCAGGGACCCTCAAACCT...CACCAGAGCAGACAACTGTGGTGGGCAGGACGCTTGCTGGAACCCATCAGACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CCA 90 bp TTCCTGGCACTTCCACTGATTGGGTGGAGGTGGGTGGGTCTGGTTTTGGGGACCGTCACTTTGCGTCTGTaGGGAGAAGCGGCATGCCTG +
Preference number: 4 (lower is better)
Translates to: FLALPLIGWRWVGLVLGTVTLRL*GEAACL
Trigger: CAGGCATGCCGCTTCTCCCCACAGACGCAAAGTGAC...GGTCCCCAAAACCAGACCCACCCACCTCCACCCAATCAGTGGAAGTGCCAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CCA 90 bp TCTGATGGGTTCCAGCAAGCGTCCTGCCCACCACAGTTGTCTGCTCTGGTGGGGCTTCCACTGATTGGGTaGAGGTGGGTGGGTCTGGTT +
Preference number: 4 (lower is better)
Translates to: SDGFQQASCPPQLSALVGLPLIG*RWVGLV
Trigger: AACCAGACCCACCCACCTCCACCCAATCAGTGGAAG...CCCCACCAGAGCAGACAACTGTGGTGGGCAGGACGCTTGCTGGAACCCATCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CCA 90 bp GCTGGATGCCAGCACAGTCACTTTGCGTCTGTGGGGAGAAGCGGCATGCCTGTGCTTCCACTGATTGGGTaGAGGTGGGTGGGTCTGGTT +
Preference number: 4 (lower is better)
Translates to: AGCQHSHFASVGRSGMPVLPLIG*RWVGLV
Trigger: AACCAGACCCACCCACCTCCACCCAATCAGTGGAAG...CACAGGCATGCCGCTTCTCCCCACAGACGCAAAGTGACTGTGCTGGCATCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR TCA 90 bp TCTGGTTTTGGGGACCAGGTGTCTGATGGGTTCCAGCAAGCGTCCTGCCCACCATTGAGGGTCCCTGGGTaGTTTGGACGTGCGGGATAT +
Preference number: 4 (lower is better)
Translates to: SGFGDQVSDGFQQASCPPLRVPG*FGRAGY
Trigger: ATATCCCGCACGTCCAAATCACCCAGGGACCCTCAA...TGGTGGGCAGGACGCTTGCTGGAACCCATCAGACACCTGGTCCCCAAAACCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR TCA 90 bp ATTGGGTGGAGGTGGGTGGGTCTGGTTTTGGGGACCAGGTGTCTGATGGGTTCCTTGAGGGTCCCTGGGTaGTTTGGACGTGCGGGATAT +
Preference number: 4 (lower is better)
Translates to: IGWRWVGLVLGTRCLMGSLRVPG*FGRAGY
Trigger: ATATCCCGCACGTCCAAATCACCCAGGGACCCTCAA...GGAACCCATCAGACACCTGGTCCCCAAAACCAGACCCACCCACCTCCACCCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR TCA 90 bp AGGTGGGTGGGTCTGGTTTTGGGGACCAGGTGTCTGATGGGTTCCAGCAAGCGTTTGAGGGTCCCTGGGTaGTTTGGACGTGCGGGATAT +
Preference number: 4 (lower is better)
Translates to: RWVGLVLGTRCLMGSSKRLRVPG*FGRAGY
Trigger: ATATCCCGCACGTCCAAATCACCCAGGGACCCTCAA...ACGCTTGCTGGAACCCATCAGACACCTGGTCCCCAAAACCAGACCCACCCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR GCA 90 bp TCCACTGATTGGGTGGAGGTGGGTGGGTCTGGTTTTGGGGACCAGGTGTCTGATCAGACACTTCGCTCTTaGCACATCCCACAGGCGGAC +
Preference number: 4 (lower is better)
Translates to: STDWVEVGGSGFGDQVSDQTLRS*HIPQAD
Trigger: GTCCGCCTGTGGGATGTGGCAAGAGCGAAGTGTCTG...ATCAGACACCTGGTCCCCAAAACCAGACCCACCCACCTCCACCCAATCAGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373574.2
ENST00000613760.4
CDS-3UTR GCA 90 bp TTTCCTGGCACTTCCACTGATTGGGTGGAGGTGGGTGGGTCTGGTTTTGGGGACTGGATGGAGTCACGGTaGCCAACTAAGAGGCGCAGC +
Preference number: 4 (lower is better)
Translates to: FPGTSTDWVEVGGSGFGDWMESR*PTKRRS
Trigger: GCTGCGCCTCTTAGTTGGGCACCGTGACTCCATCCA...GTCCCCAAAACCAGACCCACCCACCTCCACCCAATCAGTGGAAGTGCCAGGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR GCA 90 bp TCCACTGATTGGGTGGAGGTGGGTGGGTCTGGTTTTGGGGACCAGGTGTCTGATTGGATGGAGTCACGGTaGCCAACTAAGAGGCGCAGC +
Preference number: 4 (lower is better)
Translates to: STDWVEVGGSGFGDQVSDWMESR*PTKRRS
Trigger: GCTGCGCCTCTTAGTTGGGCACCGTGACTCCATCCA...ATCAGACACCTGGTCCCCAAAACCAGACCCACCCACCTCCACCCAATCAGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR GCA 90 bp TTTGGGGACCAGGTGTCTGATGGGTTCCAGCAAGCGTCCTGCCCACCACAGTTGTGGGTGAGAAGTCGCTaGTCTGGATGGAGTCACGGT +
Preference number: 4 (lower is better)
Translates to: FGDQVSDGFQQASCPPQLWVRSR*SGWSHG
Trigger: ACCGTGACTCCATCCAGAGCAGCGACTTCTCACCCA...CAACTGTGGTGGGCAGGACGCTTGCTGGAACCCATCAGACACCTGGTCCCCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR GCA 90 bp AGGTGTCTGATGGGTTCCAGCAAGCGTCCTGCCCACCACAGTTGTCTGCTCTGGTGGGTGAGAAGTCGCTaGTCTGGATGGAGTCACGGT +
Preference number: 4 (lower is better)
Translates to: RCLMGSSKRPAHHSCLLWWVRSR*SGWSHG
Trigger: ACCGTGACTCCATCCAGAGCAGCGACTTCTCACCCA...CCAGAGCAGACAACTGTGGTGGGCAGGACGCTTGCTGGAACCCATCAGACACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR GCA 90 bp AGGTGTCTGATGGGTTCCAGCAAGCGTCCTGCCCACCACAGTTGTCTGCTCTGGTGGGGATCTGCTGGATaGCAGCACAGTCACTTTGCG +
Preference number: 4 (lower is better)
Translates to: RCLMGSSKRPAHHSCLLWWGSAG*QHSHFA
Trigger: CGCAAAGTGACTGTGCTGGCATCCAGCAGATCCCCA...CCAGAGCAGACAACTGTGGTGGGCAGGACGCTTGCTGGAACCCATCAGACACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR GCA 90 bp GTGTCTGATGGGTTCCAGCAAGCGTCCTGCCCACCACAGTTGTCTGCTCTGGTGTTCCAGCAAGCGTCCTaGCCACCACAGTTGTCTGCT +
Preference number: 4 (lower is better)
Translates to: VSDGFQQASCPPQLSALVFQQAS*PPQLSA
Trigger: AGCAGACAACTGTGGTGGGCAGGACGCTTGCTGGAA...CACCAGAGCAGACAACTGTGGTGGGCAGGACGCTTGCTGGAACCCATCAGACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR GCA 90 bp TGCTGGATGCCAGCACAGTCACTTTGCGTCTGTGGGGAGAAGCGGCATGCCTGTTTCCAGCAAGCGTCCTaGCCACCACAGTTGTCTGCT +
Preference number: 4 (lower is better)
Translates to: CWMPAQSLCVCGEKRHACFQQAS*PPQLSA
Trigger: AGCAGACAACTGTGGTGGGCAGGACGCTTGCTGGAA...ACAGGCATGCCGCTTCTCCCCACAGACGCAAAGTGACTGTGCTGGCATCCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CCA 90 bp TTCCTGGCACTTCCACTGATTGGGTGGAGGTGGGTGGGTCTGGTTTTGGGGACCAGTCGCTGCTCTGGATaGAGTCACGGTGCCCAACTA +
Preference number: 4 (lower is better)
Translates to: FLALPLIGWRWVGLVLGTSRCSG*SHGAQL
Trigger: TAGTTGGGCACCGTGACTCCATCCAGAGCAGCGACT...GGTCCCCAAAACCAGACCCACCCACCTCCACCCAATCAGTGGAAGTGCCAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CCA 90 bp TTTGGGGACCAGGTGTCTGATGGGTTCCAGCAAGCGTCCTGCCCACCACAGTTGAGTCGCTGCTCTGGATaGAGTCACGGTGCCCAACTA +
Preference number: 4 (lower is better)
Translates to: FGDQVSDGFQQASCPPQLSRCSG*SHGAQL
Trigger: TAGTTGGGCACCGTGACTCCATCCAGAGCAGCGACT...CAACTGTGGTGGGCAGGACGCTTGCTGGAACCCATCAGACACCTGGTCCCCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CCA 90 bp TCCACTGATTGGGTGGAGGTGGGTGGGTCTGGTTTTGGGGACCAGGTGTCTGATCCAGGCAGTTCACCGTaGGTGAGAAGTCGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: STDWVEVGGSGFGDQVSDPGSSP*VRSRCS
Trigger: AGAGCAGCGACTTCTCACCCACGGTGAACTGCCTGG...ATCAGACACCTGGTCCCCAAAACCAGACCCACCCACCTCCACCCAATCAGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CCA 90 bp TGCTGGATGCCAGCACAGTCACTTTGCGTCTGTGGGGAGAAGCGGCATGCCTGTGTGGGCTTCCAGATGTaGATGGTCTTGTCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: CWMPAQSLCVCGEKRHACVGFQM*MVLSQE
Trigger: CTCCTGGGACAAGACCATCCACATCTGGAAGCCCAC...ACAGGCATGCCGCTTCTCCCCACAGACGCAAAGTGACTGTGCTGGCATCCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CCA 90 bp GTGGGTGGGTCTGGTTTTGGGGACCAGGTGTCTGATGGGTTCCAGCAAGCGTCCGGTCCCTGGGTGATTTaGACGTGCGGGATATTTGAC +
Preference number: 4 (lower is better)
Translates to: VGGSGFGDQVSDGFQQASGPWVI*TCGIFD
Trigger: GTCAAATATCCCGCACGTCCAAATCACCCAGGGACC...GGACGCTTGCTGGAACCCATCAGACACCTGGTCCCCAAAACCAGACCCACCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CCA 90 bp GAGGTGGGTGGGTCTGGTTTTGGGGACCAGGTGTCTGATGGGTTCCAGCAAGCGGGTCCCTGGGTGATTTaGACGTGCGGGATATTTGAC +
Preference number: 4 (lower is better)
Translates to: EVGGSGFGDQVSDGFQQAGPWVI*TCGIFD
Trigger: GTCAAATATCCCGCACGTCCAAATCACCCAGGGACC...CGCTTGCTGGAACCCATCAGACACCTGGTCCCCAAAACCAGACCCACCCACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CCA 90 bp TGCTGGATGCCAGCACAGTCACTTTGCGTCTGTGGGGAGAAGCGGCATGCCTGTCTTCCACTGATTGGGTaGAGGTGGGTGGGTCTGGTT +
Preference number: 4 (lower is better)
Translates to: CWMPAQSLCVCGEKRHACLPLIG*RWVGLV
Trigger: AACCAGACCCACCCACCTCCACCCAATCAGTGGAAG...ACAGGCATGCCGCTTCTCCCCACAGACGCAAAGTGACTGTGCTGGCATCCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR GCA 90 bp TTTCCTGGCACTTCCACTGATTGGGTGGAGGTGGGTGGGTCTGGTTTTGGGGACTTGACCTCCCCGCCGTaGTGGCCGAAGAATTTCACT +
Preference number: 4 (lower is better)
Translates to: FPGTSTDWVEVGGSGFGDLTSPP*WPKNFT
Trigger: AGTGAAATTCTTCGGCCAGCACGGCGGGGAGGTCAA...GTCCCCAAAACCAGACCCACCCACCTCCACCCAATCAGTGGAAGTGCCAGGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CCA 90 bp TTCCTGGCACTTCCACTGATTGGGTGGAGGTGGGTGGGTCTGGTTTTGGGGACCGGTCCCTGGGTGATTTaGACGTGCGGGATATTTGAC +
Preference number: 4 (lower is better)
Translates to: FLALPLIGWRWVGLVLGTGPWVI*TCGIFD
Trigger: GTCAAATATCCCGCACGTCCAAATCACCCAGGGACC...GGTCCCCAAAACCAGACCCACCCACCTCCACCCAATCAGTGGAAGTGCCAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CCA 90 bp AGACTGCTTTGTTTCCTGGCACTTCCACTGATTGGGTGGAGGTGGGTGGGTCTGAGGTTTGAGGGTCCCTaGGTGATTTGGACGTGCGGG +
Preference number: 4 (lower is better)
Translates to: RLLCFLALPLIGWRWVGLRFEGP*VIWTCG
Trigger: CCCGCACGTCCAAATCACCCAGGGACCCTCAAACCT...CAGACCCACCCACCTCCACCCAATCAGTGGAAGTGCCAGGAAACAAAGCAGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CCA 90 bp TGGGTGGAGGTGGGTGGGTCTGGTTTTGGGGACCAGGTGTCTGATGGGTTCCAGCGGCACCATCTAAGGTaGTTGGTGTTAGGTTTGAGG +
Preference number: 4 (lower is better)
Translates to: WVEVGGSGFGDQVSDGFQRHHLR*LVLGLR
Trigger: CCTCAAACCTAACACCAACCACCTTAGATGGTGCCG...CTGGAACCCATCAGACACCTGGTCCCCAAAACCAGACCCACCCACCTCCACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CCA 90 bp TCTGATGGGTTCCAGCAAGCGTCCTGCCCACCACAGTTGTCTGCTCTGGTGGGGCGGCACCATCTAAGGTaGTTGGTGTTAGGTTTGAGG +
Preference number: 4 (lower is better)
Translates to: SDGFQQASCPPQLSALVGRHHLR*LVLGLR
Trigger: CCTCAAACCTAACACCAACCACCTTAGATGGTGCCG...CCCCACCAGAGCAGACAACTGTGGTGGGCAGGACGCTTGCTGGAACCCATCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CCA 90 bp TTTCCTGGCACTTCCACTGATTGGGTGGAGGTGGGTGGGTCTGGTTTTGGGGACGCCATGGGGATCTGCTaGATGCCAGCACAGTCACTT +
Preference number: 4 (lower is better)
Translates to: FPGTSTDWVEVGGSGFGDAMGIC*MPAQSL
Trigger: AAGTGACTGTGCTGGCATCCAGCAGATCCCCATGGC...GTCCCCAAAACCAGACCCACCCACCTCCACCCAATCAGTGGAAGTGCCAGGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR TCA 90 bp AGACTGCTTTGTTTCCTGGCACTTCCACTGATTGGGTGGAGGTGGGTGGGTCTGGGTGGAAAGGTGACGTaGCACAGGACACAGCACCAT +
Preference number: 4 (lower is better)
Translates to: RLLCFLALPLIGWRWVGLGGKVT*HRTQHH
Trigger: ATGGTGCTGTGTCCTGTGTCACGTCACCTTTCCACC...CAGACCCACCCACCTCCACCCAATCAGTGGAAGTGCCAGGAAACAAAGCAGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618744.4
CDS-3UTR CCA 90 bp GTGTCTGATGGGTTCCAGCAAGCGTCCTGCCCACCACAGTTGTCTGCTCTGGTGTTCACCCAGGTGACATaGCCCTTCAGTTGGATAAGC +
Preference number: 4 (lower is better)
Translates to: VSDGFQQASCPPQLSALVFTQVT*PFSWIS
Trigger: GCTTATCCAACTGAAGGGCCATGTCACCTGGGTGAA...CACCAGAGCAGACAACTGTGGTGGGCAGGACGCTTGCTGGAACCCATCAGACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CCA 90 bp ATTGGGTGGAGGTGGGTGGGTCTGGTTTTGGGGACCAGGTGTCTGATGGGTTCCTTCACCCAGGTGACATaGCCCTTCAGTTGGATAAGC +
Preference number: 4 (lower is better)
Translates to: IGWRWVGLVLGTRCLMGSFTQVT*PFSWIS
Trigger: GCTTATCCAACTGAAGGGCCATGTCACCTGGGTGAA...GGAACCCATCAGACACCTGGTCCCCAAAACCAGACCCACCCACCTCCACCCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CAA 90 bp GGGGAGAAGCGGCATGCCTGTGCGCCACTGAGGGGAGCGGGTGAGGTCGGCACCGAGAAGGCAGAAGAGTaGACCTCCCCGCCGTGCTGG +
Preference number: 5 (lower is better)
Translates to: GEKRHACAPLRGAGEVGTEKAEE*TSPPCW
Trigger: CCAGCACGGCGGGGAGGTCAACTCTTCTGCCTTCTC...GGTGCCGACCTCACCCGCTCCCCTCAGTGGCGCACAGGCATGCCGCTTCTCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CAA 90 bp GGGGAGAAGCGGCATGCCTGTGCGCCACTGAGGGGAGCGGGTGAGGTCGGCACCCAGAGCATCACCCGCTaGTCCCAGCCACCTGATGCC +
Preference number: 5 (lower is better)
Translates to: GEKRHACAPLRGAGEVGTQSITR*SQPPDA
Trigger: GGCATCAGGTGGCTGGGACAAGCGGGTGATGCTCTG...GGTGCCGACCTCACCCGCTCCCCTCAGTGGCGCACAGGCATGCCGCTTCTCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CAA 90 bp TCACTTTGCGTCTGTGGGGAGAAGCGGCATGCCTGTGCGCCACTGAGGGGAGCGCGTCTCCACACTCCGTaGGTGACCCTTCAGGACCCG +
Preference number: 5 (lower is better)
Translates to: SLCVCGEKRHACAPLRGARLHTP*VTLQDP
Trigger: CGGGTCCTGAAGGGTCACCAACGGAGTGTGGAGACG...CGCTCCCCTCAGTGGCGCACAGGCATGCCGCTTCTCCCCACAGACGCAAAGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373574.2
ENST00000613760.4
CDS-3UTR CAA 90 bp TCACTTTGCGTCTGTGGGGAGAAGCGGCATGCCTGTGCGCCACTGAGGGGAGCGCAGAGCATCACCCGCTaGTCCCAGCCACCTGATGCC +
Preference number: 5 (lower is better)
Translates to: SLCVCGEKRHACAPLRGAQSITR*SQPPDA
Trigger: GGCATCAGGTGGCTGGGACAAGCGGGTGATGCTCTG...CGCTCCCCTCAGTGGCGCACAGGCATGCCGCTTCTCCCCACAGACGCAAAGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS TCA 90 bp GCCGGACTGCACATCCCAGAGCATCACCCGCTTGTCCCAGCCACCTaGTGCCAGCTGTCTCGAGTCAGGGCTGAAGCTGACCGTCTCCAC +
Preference number: 5 (lower is better)
Translates to: AGLHIPEHHPLVPAT*CQLSRVRAEADRLH
Trigger: GTGGAGACGGTCAGCTTCAGCCCTGACTCGAGACAGCTGGCATCAGGTGGCTGGGACAAGCGGGTGATGCTCTGGGATGTGCAGTCCGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS GCA 90 bp CCCAGGAGCCGGTGGCCAGGCAGTTCACCGTGGGTGAGAAGTCGCTaGTCTGGATGGAGTCACGGTGCCCAACTAAGAGGCGCAGCATCT +
Preference number: 5 (lower is better)
Translates to: PRSRWPGSSPWVRSR*SGWSHGAQLRGAAS
Trigger: AGATGCTGCGCCTCTTAGTTGGGCACCGTGACTCCATCCAGAGCAGCGACTTCTCACCCACGGTGAACTGCCTGGCCACCGGCTCCTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS CCA 90 bp CTCTTGCCACATCCCACAGGCGGACAGTGCAGTCACAGGAGGCGCTaGCGAAGAGGTGGCCATCAGGGGAGAAGCGGCAGAACTTCACGG +
Preference number: 5 (lower is better)
Translates to: LLPHPTGGQCSHRRR*RRGGHQGRSGRTSR
Trigger: CCGTGAAGTTCTGCCGCTTCTCCCCTGATGGCCACCTCTTCGCCAGCGCCTCCTGTGACTGCACTGTCCGCCTGTGGGATGTGGCAAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373574.2
ENST00000613760.4
CDS CCA 90 bp CGGTGGCCAGGCAGTTCACCGTGGGTGAGAAGTCGCTGCTCTGGATaGAGTCACGGTGCCCAACTAAGAGGCGCAGCATCTGGCCGGACT +
Preference number: 5 (lower is better)
Translates to: RWPGSSPWVRSRCSG*SHGAQLRGAASGRT
Trigger: AGTCCGGCCAGATGCTGCGCCTCTTAGTTGGGCACCGTGACTCCATCCAGAGCAGCGACTTCTCACCCACGGTGAACTGCCTGGCCACCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CAA 90 bp CCAGCACAGTCACTTTGCGTCTGTGGGGAGAAGCGGCATGCCTGTGCGCCACTGGAGAAGGCAGAAGAGTaGACCTCCCCGCCGTGCTGG +
Preference number: 5 (lower is better)
Translates to: PAQSLCVCGEKRHACAPLEKAEE*TSPPCW
Trigger: CCAGCACGGCGGGGAGGTCAACTCTTCTGCCTTCTC...CAGTGGCGCACAGGCATGCCGCTTCTCCCCACAGACGCAAAGTGACTGTGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS TCA 90 bp CTGTGGGGAGAAGCGGCATGCCTGTGCGCCACTGAGGGGAGCGGGTaGGGTCGGCACCATCTAAGGTGGTTGGTGTTAGGTTTGAGGGTC +
Preference number: 5 (lower is better)
Translates to: LWGEAACLCATEGSG*GRHHLRWLVLGLRV
Trigger: GACCCTCAAACCTAACACCAACCACCTTAGATGGTGCCGACCTCACCCGCTCCCCTCAGTGGCGCACAGGCATGCCGCTTCTCCCCACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CAA 90 bp TGGATGCCAGCACAGTCACTTTGCGTCTGTGGGGAGAAGCGGCATGCCTGTGCGCAGAGCATCACCCGCTaGTCCCAGCCACCTGATGCC +
Preference number: 5 (lower is better)
Translates to: WMPAQSLCVCGEKRHACAQSITR*SQPPDA
Trigger: GGCATCAGGTGGCTGGGACAAGCGGGTGATGCTCTG...CGCACAGGCATGCCGCTTCTCCCCACAGACGCAAAGTGACTGTGCTGGCATCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CAA 90 bp TCTGATGGGTTCCAGCAAGCGTCCTGCCCACCACAGTTGTCTGCTCTGGTGGGGTCCTGCCCACCACAGTaGTCTGCTCTGGTGGGGCCT +
Preference number: 5 (lower is better)
Translates to: SDGFQQASCPPQLSALVGSCPPQ*SALVGP
Trigger: AGGCCCCACCAGAGCAGACAACTGTGGTGGGCAGGA...CCCCACCAGAGCAGACAACTGTGGTGGGCAGGACGCTTGCTGGAACCCATCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS TCA 90 bp AGTCACTTTGCGTCTGTGGGGAGAAGCGGCATGCCTGTGCGCCACTaGGGGGAGCGGGTGAGGTCGGCACCATCTAAGGTGGTTGGTGTT +
Preference number: 5 (lower is better)
Translates to: SHFASVGRSGMPVRH*GERVRSAPSKVVGV
Trigger: AACACCAACCACCTTAGATGGTGCCGACCTCACCCGCTCCCCTCAGTGGCGCACAGGCATGCCGCTTCTCCCCACAGACGCAAAGTGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS GCA 90 bp CAGTTCACCGTGGGTGAGAAGTCGCTGCTCTGGATGGAGTCACGGTaGCCAACTAAGAGGCGCAGCATCTGGCCGGACTGCACATCCCAG +
Preference number: 5 (lower is better)
Translates to: QFTVGEKSLLWMESR*PTKRRSIWPDCTSQ
Trigger: CTGGGATGTGCAGTCCGGCCAGATGCTGCGCCTCTTAGTTGGGCACCGTGACTCCATCCAGAGCAGCGACTTCTCACCCACGGTGAACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS CCA 90 bp TCCCAGCCATACACGCAGCCATCTTCTGAGCCTGTGAGCAGCATCTaGCCATCAGGGGAGAAGGCAGAAGAGTTGACCTCCCCGCCGTGC +
Preference number: 5 (lower is better)
Translates to: SQPYTQPSSEPVSSI*PSGEKAEELTSPPC
Trigger: GCACGGCGGGGAGGTCAACTCTTCTGCCTTCTCCCCTGATGGCCAGATGCTGCTCACAGGCTCAGAAGATGGCTGCGTGTATGGCTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CAA 90 bp GTGGGTCTGGTTTTGGGGACCAGGTGTCTGATGGGTTCCAGCAAGCGTCCTGCCGCAGACACTTCGCTCTaGCCACATCCCACAGGCGGA +
Preference number: 5 (lower is better)
Translates to: VGLVLGTRCLMGSSKRPAADTSL*PHPTGG
Trigger: TCCGCCTGTGGGATGTGGCAAGAGCGAAGTGTCTGC...GGCAGGACGCTTGCTGGAACCCATCAGACACCTGGTCCCCAAAACCAGACCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373574.2
ENST00000613760.4
CDS-3UTR CAA 90 bp GAGGTGGGTGGGTCTGGTTTTGGGGACCAGGTGTCTGATGGGTTCCAGCAAGCGGCCAGCACAGTCACTTaGCGTCTGTGGGGAGAAGCG +
Preference number: 5 (lower is better)
Translates to: EVGGSGFGDQVSDGFQQAASTVT*RLWGEA
Trigger: CGCTTCTCCCCACAGACGCAAAGTGACTGTGCTGGC...CGCTTGCTGGAACCCATCAGACACCTGGTCCCCAAAACCAGACCCACCCACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CAA 90 bp GTGTCTGATGGGTTCCAGCAAGCGTCCTGCCCACCACAGTTGTCTGCTCTGGTGTCCTGCCCACCACAGTaGTCTGCTCTGGTGGGGCCT +
Preference number: 5 (lower is better)
Translates to: VSDGFQQASCPPQLSALVSCPPQ*SALVGP
Trigger: AGGCCCCACCAGAGCAGACAACTGTGGTGGGCAGGA...CACCAGAGCAGACAACTGTGGTGGGCAGGACGCTTGCTGGAACCCATCAGACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CAA 90 bp AGGTGTCTGATGGGTTCCAGCAAGCGTCCTGCCCACCACAGTTGTCTGCTCTGGTCCTGCCCACCACAGTaGTCTGCTCTGGTGGGGCCT +
Preference number: 5 (lower is better)
Translates to: RCLMGSSKRPAHHSCLLWSCPPQ*SALVGP
Trigger: AGGCCCCACCAGAGCAGACAACTGTGGTGGGCAGGA...CCAGAGCAGACAACTGTGGTGGGCAGGACGCTTGCTGGAACCCATCAGACACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CAA 90 bp CCAGCACAGTCACTTTGCGTCTGTGGGGAGAAGCGGCATGCCTGTGCGCCACTGTGGGTGGGTCTGGTTTaGGGGACCAGGTGTCTGATG +
Preference number: 5 (lower is better)
Translates to: PAQSLCVCGEKRHACAPLWVGLV*GTRCLM
Trigger: CATCAGACACCTGGTCCCCAAAACCAGACCCACCCA...CAGTGGCGCACAGGCATGCCGCTTCTCCCCACAGACGCAAAGTGACTGTGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CAA 90 bp GTGGAGGTGGGTGGGTCTGGTTTTGGGGACCAGGTGTCTGATGGGTTCCAGCAACGTCTCCACACTCCGTaGGTGACCTGCAGGCACCAG +
Preference number: 5 (lower is better)
Translates to: VEVGGSGFGDQVSDGFQQRLHTP*VTCRHQ
Trigger: CTGGTGCCTGCAGGTCACCAACGGAGTGTGGAGACG...TTGCTGGAACCCATCAGACACCTGGTCCCCAAAACCAGACCCACCCACCTCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618744.4
CDS-3UTR CAA 90 bp ATTGGGTGGAGGTGGGTGGGTCTGGTTTTGGGGACCAGGTGTCTGATGGGTTCCGCAGACACTTCGCTCTaGCCACATCCCACAGGCGGA +
Preference number: 5 (lower is better)
Translates to: IGWRWVGLVLGTRCLMGSADTSL*PHPTGG
Trigger: TCCGCCTGTGGGATGTGGCAAGAGCGAAGTGTCTGC...GGAACCCATCAGACACCTGGTCCCCAAAACCAGACCCACCCACCTCCACCCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373574.2
ENST00000613760.4
CDS-3UTR CAA 90 bp GCTGGATGCCAGCACAGTCACTTTGCGTCTGTGGGGAGAAGCGGCATGCCTGTGCACAGGCAGCTGATGTaGGCACTGTGTCCCTCTAGC +
Preference number: 5 (lower is better)
Translates to: AGCQHSHFASVGRSGMPVHRQLM*ALCPSS
Trigger: GCTAGAGGGACACAGTGCCAACATCAGCTGCCTGTG...CACAGGCATGCCGCTTCTCCCCACAGACGCAAAGTGACTGTGCTGGCATCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CAA 90 bp CTGATTGGGTGGAGGTGGGTGGGTCTGGTTTTGGGGACCAGGTGTCTGATGGGTGCCAGCACAGTCACTTaGCGTCTGTGGGGAGAAGCG +
Preference number: 5 (lower is better)
Translates to: LIGWRWVGLVLGTRCLMGASTVT*RLWGEA
Trigger: CGCTTCTCCCCACAGACGCAAAGTGACTGTGCTGGC...ACCCATCAGACACCTGGTCCCCAAAACCAGACCCACCCACCTCCACCCAATCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CAA 90 bp TGGGTGGAGGTGGGTGGGTCTGGTTTTGGGGACCAGGTGTCTGATGGGTTCCAGTGGGTGGGTCTGGTTTaGGGGACCAGGTGTCTGATG +
Preference number: 5 (lower is better)
Translates to: WVEVGGSGFGDQVSDGFQWVGLV*GTRCLM
Trigger: CATCAGACACCTGGTCCCCAAAACCAGACCCACCCA...CTGGAACCCATCAGACACCTGGTCCCCAAAACCAGACCCACCCACCTCCACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CAA 90 bp TGGATGCCAGCACAGTCACTTTGCGTCTGTGGGGAGAAGCGGCATGCCTGTGCGTGGGTGGGTCTGGTTTaGGGGACCAGGTGTCTGATG +
Preference number: 5 (lower is better)
Translates to: WMPAQSLCVCGEKRHACAWVGLV*GTRCLM
Trigger: CATCAGACACCTGGTCCCCAAAACCAGACCCACCCA...CGCACAGGCATGCCGCTTCTCCCCACAGACGCAAAGTGACTGTGCTGGCATCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CAA 90 bp AGGTGGGTGGGTCTGGTTTTGGGGACCAGGTGTCTGATGGGTTCCAGCAAGCGTCACAGGCAGCTGATGTaGGCACTGTGTCCCTCTAGC +
Preference number: 5 (lower is better)
Translates to: RWVGLVLGTRCLMGSSKRHRQLM*ALCPSS
Trigger: GCTAGAGGGACACAGTGCCAACATCAGCTGCCTGTG...ACGCTTGCTGGAACCCATCAGACACCTGGTCCCCAAAACCAGACCCACCCACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CAA 90 bp GGTGGGTCTGGTTTTGGGGACCAGGTGTCTGATGGGTTCCAGCAAGCGTCCTGCGGACGTGCGGGATATTaGACGTCTAGTCTGATCGGC +
Preference number: 5 (lower is better)
Translates to: GGSGFGDQVSDGFQQASCGRAGY*TSSLIG
Trigger: GCCGATCAGACTAGACGTCAAATATCCCGCACGTCC...GCAGGACGCTTGCTGGAACCCATCAGACACCTGGTCCCCAAAACCAGACCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS CCA 90 bp CACAGCTCGTCGGGAGAGAAGGCTATGCTCTTCACCCAGGTGACATaGCCCTTCAGTTGGATAAGCAGGCTGCTGGTTGTGGGCTTCCAG +
Preference number: 5 (lower is better)
Translates to: HSSSGEKAMLFTQVT*PFSWISRLLVVGFQ
Trigger: CTGGAAGCCCACAACCAGCAGCCTGCTTATCCAACTGAAGGGCCATGTCACCTGGGTGAAGAGCATAGCCTTCTCTCCCGACGAGCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CAA 90 bp TGGATGCCAGCACAGTCACTTTGCGTCTGTGGGGAGAAGCGGCATGCCTGTGCGAGGCACTTTCCTGTGTaGCAGTCCCAGACTTTGACC +
Preference number: 5 (lower is better)
Translates to: WMPAQSLCVCGEKRHACARHFPV*QSQTLT
Trigger: GGTCAAAGTCTGGGACTGCAACACAGGAAAGTGCCT...CGCACAGGCATGCCGCTTCTCCCCACAGACGCAAAGTGACTGTGCTGGCATCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CAA 90 bp GTGTCTGATGGGTTCCAGCAAGCGTCCTGCCCACCACAGTTGTCTGCTCTGGTGGGACGTGCGGGATATTaGACGTCTAGTCTGATCGGC +
Preference number: 5 (lower is better)
Translates to: VSDGFQQASCPPQLSALVGRAGY*TSSLIG
Trigger: GCCGATCAGACTAGACGTCAAATATCCCGCACGTCC...CACCAGAGCAGACAACTGTGGTGGGCAGGACGCTTGCTGGAACCCATCAGACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CAA 90 bp GTGGAGGTGGGTGGGTCTGGTTTTGGGGACCAGGTGTCTGATGGGTTCCAGCAAGGACGTGCGGGATATTaGACGTCTAGTCTGATCGGC +
Preference number: 5 (lower is better)
Translates to: VEVGGSGFGDQVSDGFQQGRAGY*TSSLIG
Trigger: GCCGATCAGACTAGACGTCAAATATCCCGCACGTCC...TTGCTGGAACCCATCAGACACCTGGTCCCCAAAACCAGACCCACCCACCTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CAA 90 bp AGACTGCTTTGTTTCCTGGCACTTCCACTGATTGGGTGGAGGTGGGTGGGTCTGCACAGGCAGCTGATGTaGGCACTGTGTCCCTCTAGC +
Preference number: 5 (lower is better)
Translates to: RLLCFLALPLIGWRWVGLHRQLM*ALCPSS
Trigger: GCTAGAGGGACACAGTGCCAACATCAGCTGCCTGTG...CAGACCCACCCACCTCCACCCAATCAGTGGAAGTGCCAGGAAACAAAGCAGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CAA 90 bp CTGATTGGGTGGAGGTGGGTGGGTCTGGTTTTGGGGACCAGGTGTCTGATGGGTAGGCACTTTCCTGTGTaGCAGTCCCAGACTTTGACC +
Preference number: 5 (lower is better)
Translates to: LIGWRWVGLVLGTRCLMGRHFPV*QSQTLT
Trigger: GGTCAAAGTCTGGGACTGCAACACAGGAAAGTGCCT...ACCCATCAGACACCTGGTCCCCAAAACCAGACCCACCCACCTCCACCCAATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS CCA 90 bp GGAGAGAAGGCTATGCTCTTCACCCAGGTGACATGGCCCTTCAGTTaGATAAGCAGGCTGCTGGTTGTGGGCTTCCAGATGTGGATGGTC +
Preference number: 5 (lower is better)
Translates to: GEKAMLFTQVTWPFS*ISRLLVVGFQMWMV
Trigger: GACCATCCACATCTGGAAGCCCACAACCAGCAGCCTGCTTATCCAACTGAAGGGCCATGTCACCTGGGTGAAGAGCATAGCCTTCTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CAA 90 bp TTTCCTGGCACTTCCACTGATTGGGTGGAGGTGGGTGGGTCTGGTTTTGGGGACAGGCACTTTCCTGTGTaGCAGTCCCAGACTTTGACC +
Preference number: 5 (lower is better)
Translates to: FPGTSTDWVEVGGSGFGDRHFPV*QSQTLT
Trigger: GGTCAAAGTCTGGGACTGCAACACAGGAAAGTGCCT...GTCCCCAAAACCAGACCCACCCACCTCCACCCAATCAGTGGAAGTGCCAGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CAA 90 bp TTCCTGGCACTTCCACTGATTGGGTGGAGGTGGGTGGGTCTGGTTTTGGGGACCCACCATCTAAGGTGGTaGGTGTTAGGTTTGAGGGTC +
Preference number: 5 (lower is better)
Translates to: FLALPLIGWRWVGLVLGTHHLRW*VLGLRV
Trigger: GACCCTCAAACCTAACACCAACCACCTTAGATGGTG...GGTCCCCAAAACCAGACCCACCCACCTCCACCCAATCAGTGGAAGTGCCAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CAA 90 bp ACCAGGTGTCTGATGGGTTCCAGCAAGCGTCCTGCCCACCACAGTTGTCTGCTCCACCATCTAAGGTGGTaGGTGTTAGGTTTGAGGGTC +
Preference number: 5 (lower is better)
Translates to: TRCLMGSSKRPAHHSCLLHHLRW*VLGLRV
Trigger: GACCCTCAAACCTAACACCAACCACCTTAGATGGTG...GAGCAGACAACTGTGGTGGGCAGGACGCTTGCTGGAACCCATCAGACACCTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS-3UTR CAA 90 bp GTGGAGGTGGGTGGGTCTGGTTTTGGGGACCAGGTGTCTGATGGGTTCCAGCAACACCATCTAAGGTGGTaGGTGTTAGGTTTGAGGGTC +
Preference number: 5 (lower is better)
Translates to: VEVGGSGFGDQVSDGFQQHHLRW*VLGLRV
Trigger: GACCCTCAAACCTAACACCAACCACCTTAGATGGTG...TTGCTGGAACCCATCAGACACCTGGTCCCCAAAACCAGACCCACCCACCTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS TCA 90 bp CGGCACCATCTAAGGTGGTTGGTGTTAGGTTTGAGGGTCCCTGGGTaGTTTGGACGTGCGGGATATTTGACGTCTAGTCTGATCGGCAGC +
Preference number: 5 (lower is better)
Translates to: RHHLRWLVLGLRVPG*FGRAGYLTSSLIGS
Trigger: GCTGCCGATCAGACTAGACGTCAAATATCCCGCACGTCCAAATCACCCAGGGACCCTCAAACCTAACACCAACCACCTTAGATGGTGCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS CCA 72 bp GCTGGCCGAAGAATTTCACTCTCCGCACGGCCAGCGTaGCCGGGACCCCGCTGTTCATGGGCACCCGGCCCC +
Preference number: 6 (lower is better)
Translates to: AGRRISLSARPA*PGPRCSWAPGP
Trigger: GGGGCCGGGTGCCCATGAACAGCGGGGTCCCGGCCACGCTGGCCGTGCGGAGAGTGAAATTCTTCGGCCAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS GCA 72 bp GCTGAAGCTGACCGTCTCCACACTCCGTTGGTGACCTaGAGGCACCAGCCCGGGGTCGGGGAAGGTGGAAAG +
Preference number: 6 (lower is better)
Translates to: AEADRLHTPLVT*RHQPGVGEGGK
Trigger: CTTTCCACCTTCCCCGACCCCGGGCTGGTGCCTGCAGGTCACCAACGGAGTGTGGAGACGGTCAGCTTCAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618744.4
CDS CAA 90 bp CAGCTGTCTCGAGTCAGGGCTGAAGCTGACCGTCTCCACACTCCGTaGGTGACCTGCAGGCACCAGCCCGGGGTCGGGGAAGGTGGAAAG +
Preference number: 6 (lower is better)
Translates to: QLSRVRAEADRLHTP*VTCRHQPGVGEGGK
Trigger: CTTTCCACCTTCCCCGACCCCGGGCTGGTGCCTGCAGGTCACCAACGGAGTGTGGAGACGGTCAGCTTCAGCCCTGACTCGAGACAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618744.4
CDS CCA 72 bp CAGCTGATGTTGGCACTGTGTCCCTCTAGCGCCTGGTaGGAGACTGCTGGGGTCACCATCCGCAGGTCCCAG +
Preference number: 6 (lower is better)
Translates to: QLMLALCPSSAW*ETAGVTIRRSQ
Trigger: CTGGGACCTGCGGATGGTGACCCCAGCAGTCTCCCACCAGGCGCTAGAGGGACACAGTGCCAACATCAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS CAA 90 bp AGGCGCAGCATCTGGCCGGACTGCACATCCCAGAGCATCACCCGCTaGTCCCAGCCACCTGATGCCAGCTGTCTCGAGTCAGGGCTGAAG +
Preference number: 6 (lower is better)
Translates to: RRSIWPDCTSQSITR*SQPPDASCLESGLK
Trigger: CTTCAGCCCTGACTCGAGACAGCTGGCATCAGGTGGCTGGGACAAGCGGGTGATGCTCTGGGATGTGCAGTCCGGCCAGATGCTGCGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS TCA 72 bp GAAGCGGCATGCCTGTGCGCCACTGAGGGGAGCGGGTaGGGTCGGCACCATCTAAGGTGGTTGGTGTTAGGT +
Preference number: 6 (lower is better)
Translates to: EAACLCATEGSG*GRHHLRWLVLG
Trigger: ACCTAACACCAACCACCTTAGATGGTGCCGACCTCACCCGCTCCCCTCAGTGGCGCACAGGCATGCCGCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS GCA 72 bp CGGTGGCCAGGCAGTTCACCGTGGGTGAGAAGTCGCTaGTCTGGATGGAGTCACGGTGCCCAACTAAGAGGC +
Preference number: 6 (lower is better)
Translates to: RWPGSSPWVRSR*SGWSHGAQLRG
Trigger: GCCTCTTAGTTGGGCACCGTGACTCCATCCAGAGCAGCGACTTCTCACCCACGGTGAACTGCCTGGCCACCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS CAA 72 bp ATCTGGCCGGACTGCACATCCCAGAGCATCACCCGCTaGTCCCAGCCACCTGATGCCAGCTGTCTCGAGTCA +
Preference number: 6 (lower is better)
Translates to: IWPDCTSQSITR*SQPPDASCLES
Trigger: TGACTCGAGACAGCTGGCATCAGGTGGCTGGGACAAGCGGGTGATGCTCTGGGATGTGCAGTCCGGCCAGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS GCA 72 bp TTGGTGACCCTTCAGGACCCGCAGACACTTCGCTCTTaGCACATCCCACAGGCGGACAGTGCAGTCACAGGA +
Preference number: 6 (lower is better)
Translates to: LVTLQDPQTLRS*HIPQADSAVTG
Trigger: TCCTGTGACTGCACTGTCCGCCTGTGGGATGTGGCAAGAGCGAAGTGTCTGCGGGTCCTGAAGGGTCACCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373574.2
ENST00000613760.4
CDS CCA 72 bp GGCAGTTCACCGTGGGTGAGAAGTCGCTGCTCTGGATaGAGTCACGGTGCCCAACTAAGAGGCGCAGCATCT +
Preference number: 6 (lower is better)
Translates to: GSSPWVRSRCSG*SHGAQLRGAAS
Trigger: AGATGCTGCGCCTCTTAGTTGGGCACCGTGACTCCATCCAGAGCAGCGACTTCTCACCCACGGTGAACTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS CCA 72 bp GCTATGCTCTTCACCCAGGTGACATGGCCCTTCAGTTaGATAAGCAGGCTGCTGGTTGTGGGCTTCCAGATG +
Preference number: 6 (lower is better)
Translates to: AMLFTQVTWPFS*ISRLLVVGFQM
Trigger: CATCTGGAAGCCCACAACCAGCAGCCTGCTTATCCAACTGAAGGGCCATGTCACCTGGGTGAAGAGCATAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4
CDS CCA 72 bp ACTAAGATTTTCCCATCTGGGGTGAAGGCACAGGTGTaGGCCACATCCAGGACTCCCTTCAGGGTCTCAAGG +
Preference number: 6 (lower is better)
Translates to: TKIFPSGVKAQV*ATSRTPFRVSR
Trigger: CCTTGAGACCCTGAAGGGAGTCCTGGATGTGGCCCACACCTGTGCCTTCACCCCAGATGGGAAAATCTTAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373574.2
CDS TCA 72 bp CTAAGGTGGTTGGTGTTAGGTTTGAGGGTCCCTGGGTaGTTTGGACGTGCGGGATATTTGACGTCTAGTCTG +
Preference number: 6 (lower is better)
Translates to: LRWLVLGLRVPG*FGRAGYLTSSL
Trigger: CAGACTAGACGTCAAATATCCCGCACGTCCAAATCACCCAGGGACCCTCAAACCTAACACCAACCACCTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373574.2
ENST00000613760.4
ENST00000618744.4