RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for WDR36 (Homo sapiens)

Ensembl gene IDs: ENSG00000134987

Ensembl transcript IDs: ENST00000504122.2, ENST00000505303.5, ENST00000506538.6, ENST00000513710.4, ENST00000515784.1, ENST00000612402.4

Found 441 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CATGGGGAAGCAGATGCTCATATCTTGCTCAGGGGAACTGTAACTTaGTACAGCCATTCTGGAACCCAAATGGAAGTATCTCTTCAAATT +
Preference number: 1 (lower is better)
Translates to: HGEADAHILLRGTVT*YSHSGTQMEVSLQI
Trigger: AATTTGAAGAGATACTTCCATTTGGGTTCCAGAATGGCTGTATCAAGTTACAGTTCCCCTGAGCAAGATATGAGCATCTGCTTCCCCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
3UTR CCA 90 bp AAAGGCCATCTTCCAATGGAATTTGGAATTTCCCTTACCTATCCTTaGTATCAGTTTAACCATCTACAGCGACTTGCCTTGGGCAAGGAA +
Preference number: 1 (lower is better)
Translates to: KGHLPMEFGISLTYP*YQFNHLQRLALGKE
Trigger: TTCCTTGCCCAAGGCAAGTCGCTGTAGATGGTTAAACTGATACCAAGGATAGGTAAGGGAAATTCCAAATTCCATTGGAAGATGGCCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
3UTR TCA 90 bp TTCAAGAGATGTGCTCACCAGCAGTTAACCAATTTTTATAGAACATaGGGAAGGCTTTACCCAAATCTGAGAACATACCAAAGTAATGCA +
Preference number: 1 (lower is better)
Translates to: FKRCAHQQLTNFYRT*GRLYPNLRTYQSNA
Trigger: TGCATTACTTTGGTATGTTCTCAGATTTGGGTAAAGCCTTCCTCATGTTCTATAAAAATTGGTTAACTGCTGGTGAGCACATCTCTTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
3UTR CAA 90 bp ACAGGGGTCCTGGAACTAGATACCAAGGGAGGACTGCACTCGGTATaGTCGGTCTCTCCAAATCAGTCCTATAAATGTTGTGCAACCCAT +
Preference number: 2 (lower is better)
Translates to: TGVLELDTKGGLHSV*SVSPNQSYKCCATH
Trigger: ATGGGTTGCACAACATTTATAGGACTGATTTGGAGAGACCGACAATACCGAGTGCAGTCCTCCCTTGGTATCTAGTTCCAGGACCCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
3UTR CAA 90 bp TTTCATATGCATAGGTCCCATGATCTGCAGGGCATTGCTTGGATTTaGGTATCCACAGGGGTCCTGGAACTAGATACCAAGGGAGGACTG +
Preference number: 2 (lower is better)
Translates to: FHMHRSHDLQGIAWI*VSTGVLELDTKGGL
Trigger: CAGTCCTCCCTTGGTATCTAGTTCCAGGACCCCTGTGGATACCAAAATCCAAGCAATGCCCTGCAGATCATGGGACCTATGCATATGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
3UTR-3UTR GCA 90 bp GGGCTACCTGGGTTTGCAATGGTTGTGAAAGAAAAGTATACTCAGCATTTTCTTCCATCTACAGCGACTTaGCTTGGGCAAGGAAGGGCC +
Preference number: 2 (lower is better)
Translates to: GLPGFAMVVKEKYTQHFLPSTAT*LGQGRA
Trigger: GGCCCTTCCTTGCCCAAGGCAAGTCGCTGTAGATGG...AAGAAAATGCTGAGTATACTTTTCTTTCACAACCATTGCAAACCCAGGTAGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
3UTR CAA 90 bp CTTACCTATCCTTGGTATCAGTTTAACCATCTACAGCGACTTGCCTaGGGCAAGGAAGGGCCTCCCACATTTCTGATCCATGAACAACTT +
Preference number: 2 (lower is better)
Translates to: LTYPWYQFNHLQRLA*GKEGPPTFLIHEQL
Trigger: AAGTTGTTCATGGATCAGAAATGTGGGAGGCCCTTCCTTGCCCAAGGCAAGTCGCTGTAGATGGTTAAACTGATACCAAGGATAGGTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
3UTR-3UTR TCA 90 bp AAGCATATACCACAGAGAGAGCCTTATATGTACAAAAAGGGCTCATGTAGGATGCAGCAGACTTTAGCCTaGTTCCTCTCCTGCAACACA +
Preference number: 2 (lower is better)
Translates to: KHIPQREPYMYKKGSCRMQQTLA*FLSCNT
Trigger: TGTGTTGCAGGAGAGGAATCAGGCTAAAGTCTGCTG...CATCCTACATGAGCCCTTTTTGTACATATAAGGCTCTCTCTGTGGTATATGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
3UTR-3UTR TCA 90 bp GGGCTACCTGGGTTTGCAATGGTTGTGAAAGAAAAGTATACTCAGCATTTTCTTCAGCAGACTTTAGCCTaGTTCCTCTCCTGCAACACA +
Preference number: 2 (lower is better)
Translates to: GLPGFAMVVKEKYTQHFLQQTLA*FLSCNT
Trigger: TGTGTTGCAGGAGAGGAATCAGGCTAAAGTCTGCTG...AAGAAAATGCTGAGTATACTTTTCTTTCACAACCATTGCAAACCCAGGTAGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
3UTR-3UTR GCA 90 bp TATATGTACAAAAAGGGCTCATGTAGGATGATGTTCCTTTCAGCATTGTTTGTACCATCTACAGCGACTTaGCTTGGGCAAGGAAGGGCC +
Preference number: 2 (lower is better)
Translates to: YMYKKGSCRMMFLSALFVPSTAT*LGQGRA
Trigger: GGCCCTTCCTTGCCCAAGGCAAGTCGCTGTAGATGG...TACAAACAATGCTGAAAGGAACATCATCCTACATGAGCCCTTTTTGTACATATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
3UTR-3UTR CCA 90 bp CTAACAACGAACGAGAATGCTACTGGTGTTCATATTCAAACCACTGTGTTTCATGCAATCCTCCCGCTTTaGCCTCTGAAAGTGCTGGAA +
Preference number: 2 (lower is better)
Translates to: LTTNENATGVHIQTTVFHAILPL*PLKVLE
Trigger: TTCCAGCACTTTCAGAGGCCAAAGCGGGAGGATTGC...ATGAAACACAGTGGTTTGAATATGAACACCAGTAGCATTCTCGTTCGTTGTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
3UTR CAA 90 bp ACATGGGGAAGCAGATGCTCATATCTTGCTCAGGGGAACTGTAACTaGATACAGCCATTCTGGAACCCAAATGGAAGTATCTCTTCAAAT +
Preference number: 2 (lower is better)
Translates to: TWGSRCSYLAQGNCN*IQPFWNPNGSISSN
Trigger: ATTTGAAGAGATACTTCCATTTGGGTTCCAGAATGGCTGTATCAAGTTACAGTTCCCCTGAGCAAGATATGAGCATCTGCTTCCCCATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
3UTR-3UTR TCA 90 bp CTAACAACGAACGAGAATGCTACTGGTGTTCATATTCAAACCACTGTGTTTCATCAGCAGACTTTAGCCTaGTTCCTCTCCTGCAACACA +
Preference number: 2 (lower is better)
Translates to: LTTNENATGVHIQTTVFHQQTLA*FLSCNT
Trigger: TGTGTTGCAGGAGAGGAATCAGGCTAAAGTCTGCTG...ATGAAACACAGTGGTTTGAATATGAACACCAGTAGCATTCTCGTTCGTTGTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
3UTR-3UTR GCA 90 bp AAGCATATACCACAGAGAGAGCCTTATATGTACAAAAAGGGCTCATGTAGGATGTGCCTGGCCGGGAGGTaGGATTTTATTTCAAGAAAG +
Preference number: 2 (lower is better)
Translates to: KHIPQREPYMYKKGSCRMCLAGR*DFISRK
Trigger: CTTTCTTGAAATAAAATCGCACCTCCCGGCCAGGCA...CATCCTACATGAGCCCTTTTTGTACATATAAGGCTCTCTCTGTGGTATATGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
3UTR-3UTR GCA 90 bp GGGCTACCTGGGTTTGCAATGGTTGTGAAAGAAAAGTATACTCAGCATTTTCTTTGCCTGGCCGGGAGGTaGGATTTTATTTCAAGAAAG +
Preference number: 2 (lower is better)
Translates to: GLPGFAMVVKEKYTQHFLCLAGR*DFISRK
Trigger: CTTTCTTGAAATAAAATCGCACCTCCCGGCCAGGCA...AAGAAAATGCTGAGTATACTTTTCTTTCACAACCATTGCAAACCCAGGTAGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
3UTR-3UTR GCA 90 bp GGGCTACCTGGGTTTGCAATGGTTGTGAAAGAAAAGTATACTCAGCATTTTCTTTCTTGCTTGCTATGTTaGCCAGGCTGGGCTCAAATT +
Preference number: 2 (lower is better)
Translates to: GLPGFAMVVKEKYTQHFLSCLLC*PGWAQI
Trigger: AATTTGAGCCCAGCCTGGGCAACATAGCAAGCAAGA...AAGAAAATGCTGAGTATACTTTTCTTTCACAACCATTGCAAACCCAGGTAGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
3UTR-3UTR GCA 90 bp AAGCATATACCACAGAGAGAGCCTTATATGTACAAAAAGGGCTCATGTAGGATGTCTTGCTTGCTATGTTaGCCAGGCTGGGCTCAAATT +
Preference number: 2 (lower is better)
Translates to: KHIPQREPYMYKKGSCRMSCLLC*PGWAQI
Trigger: AATTTGAGCCCAGCCTGGGCAACATAGCAAGCAAGA...CATCCTACATGAGCCCTTTTTGTACATATAAGGCTCTCTCTGTGGTATATGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
3UTR-3UTR CCA 90 bp CAAATAAAACATATGGTATTTGAGGGATGCAAAACCCTCAAATACAAGGACCGAGCAATCCTCCCGCTTTaGCCTCTGAAAGTGCTGGAA +
Preference number: 2 (lower is better)
Translates to: QIKHMVFEGCKTLKYKDRAILPL*PLKVLE
Trigger: TTCCAGCACTTTCAGAGGCCAAAGCGGGAGGATTGC...TCGGTCCTTGTATTTGAGGGTTTTGCATCCCTCAAATACCATATGTTTTATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
3UTR-3UTR CCA 90 bp CTTCCAATGGAATTTGGAATTTCCCTTACCTATCCTTGGTATCAGTTTAACCATGCAATCCTCCCGCTTTaGCCTCTGAAAGTGCTGGAA +
Preference number: 2 (lower is better)
Translates to: LPMEFGISLTYPWYQFNHAILPL*PLKVLE
Trigger: TTCCAGCACTTTCAGAGGCCAAAGCGGGAGGATTGC...ATGGTTAAACTGATACCAAGGATAGGTAAGGGAAATTCCAAATTCCATTGGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
3UTR-3UTR TCA 90 bp CTAACAACGAACGAGAATGCTACTGGTGTTCATATTCAAACCACTGTGTTTCATGGCCTCCCACATTTCTaGTCCATGAACAACTTCCTT +
Preference number: 2 (lower is better)
Translates to: LTTNENATGVHIQTTVFHGLPHF*SMNNFL
Trigger: AAGGAAGTTGTTCATGGATCAGAAATGTGGGAGGCC...ATGAAACACAGTGGTTTGAATATGAACACCAGTAGCATTCTCGTTCGTTGTTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
3UTR-3UTR GCA 90 bp CAAATAAAACATATGGTATTTGAGGGATGCAAAACCCTCAAATACAAGGACCGAACATGGGGAAGCAGATaGTCATATCTTGCTCAGGGG +
Preference number: 2 (lower is better)
Translates to: QIKHMVFEGCKTLKYKDRTWGSR*SYLAQG
Trigger: CCCCTGAGCAAGATATGAGCATCTGCTTCCCCATGT...TCGGTCCTTGTATTTGAGGGTTTTGCATCCCTCAAATACCATATGTTTTATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
3UTR-3UTR TCA 90 bp CAAATAAAACATATGGTATTTGAGGGATGCAAAACCCTCAAATACAAGGACCGAGGCCTCCCACATTTCTaGTCCATGAACAACTTCCTT +
Preference number: 2 (lower is better)
Translates to: QIKHMVFEGCKTLKYKDRGLPHF*SMNNFL
Trigger: AAGGAAGTTGTTCATGGATCAGAAATGTGGGAGGCC...TCGGTCCTTGTATTTGAGGGTTTTGCATCCCTCAAATACCATATGTTTTATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
3UTR-3UTR TCA 90 bp CAAATAAAACATATGGTATTTGAGGGATGCAAAACCCTCAAATACAAGGACCGAAGGGGAACTGTAACTTaGTACAGCCATTCTGGAACC +
Preference number: 2 (lower is better)
Translates to: QIKHMVFEGCKTLKYKDRRGTVT*YSHSGT
Trigger: GGTTCCAGAATGGCTGTATCAAGTTACAGTTCCCCT...TCGGTCCTTGTATTTGAGGGTTTTGCATCCCTCAAATACCATATGTTTTATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
3UTR-3UTR GCA 90 bp CAAATAAAACATATGGTATTTGAGGGATGCAAAACCCTCAAATACAAGGACCGATGCCTGGCCGGGAGGTaGGATTTTATTTCAAGAAAG +
Preference number: 2 (lower is better)
Translates to: QIKHMVFEGCKTLKYKDRCLAGR*DFISRK
Trigger: CTTTCTTGAAATAAAATCGCACCTCCCGGCCAGGCA...TCGGTCCTTGTATTTGAGGGTTTTGCATCCCTCAAATACCATATGTTTTATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
3UTR-3UTR TCA 90 bp AAGCATATACCACAGAGAGAGCCTTATATGTACAAAAAGGGCTCATGTAGGATGAGCAATACTTCACAGTaGACATGCAGCATCTCTTTA +
Preference number: 2 (lower is better)
Translates to: KHIPQREPYMYKKGSCRMSNTSQ*TCSISL
Trigger: TAAAGAGATGCTGCATGTTCACTGTGAAGTATTGCT...CATCCTACATGAGCCCTTTTTGTACATATAAGGCTCTCTCTGTGGTATATGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
3UTR-3UTR TCA 90 bp AAGCATATACCACAGAGAGAGCCTTATATGTACAAAAAGGGCTCATGTAGGATGCACATTTCTGATCCATaGACAACTTCCTTTCAGTAC +
Preference number: 2 (lower is better)
Translates to: KHIPQREPYMYKKGSCRMHISDP*TTSFQY
Trigger: GTACTGAAAGGAAGTTGTTCATGGATCAGAAATGTG...CATCCTACATGAGCCCTTTTTGTACATATAAGGCTCTCTCTGTGGTATATGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
3UTR-3UTR TCA 90 bp AAGCATATACCACAGAGAGAGCCTTATATGTACAAAAAGGGCTCATGTAGGATGGGTTTGCAATGGTTGTaGAAGAAAAGTATACTCAGC +
Preference number: 2 (lower is better)
Translates to: KHIPQREPYMYKKGSCRMGLQWL*KKSILS
Trigger: GCTGAGTATACTTTTCTTTCACAACCATTGCAAACC...CATCCTACATGAGCCCTTTTTGTACATATAAGGCTCTCTCTGTGGTATATGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
3UTR-3UTR TCA 90 bp CAAATAAAACATATGGTATTTGAGGGATGCAAAACCCTCAAATACAAGGACCGACTGGTAAATGCCTTTTaGGGACTGCTTCTTTTGGAG +
Preference number: 2 (lower is better)
Translates to: QIKHMVFEGCKTLKYKDRLVNAF*GLLLLE
Trigger: CTCCAAAAGAAGCAGTCCTCAAAAGGCATTTACCAG...TCGGTCCTTGTATTTGAGGGTTTTGCATCCCTCAAATACCATATGTTTTATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
3UTR-3UTR GCA 90 bp GGGCTACCTGGGTTTGCAATGGTTGTGAAAGAAAAGTATACTCAGCATTTTCTTTGTTATCTACATGTCTaGAGTGTCAGTAAAAGGCCA +
Preference number: 2 (lower is better)
Translates to: GLPGFAMVVKEKYTQHFLCYLHV*SVSKRP
Trigger: TGGCCTTTTACTGACACTGCAGACATGTAGATAACA...AAGAAAATGCTGAGTATACTTTTCTTTCACAACCATTGCAAACCCAGGTAGCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
3UTR-3UTR GCA 90 bp CAAATAAAACATATGGTATTTGAGGGATGCAAAACCCTCAAATACAAGGACCGAATAGGTCCCATGATCTaGAGGGCATTGCTTGGATTT +
Preference number: 2 (lower is better)
Translates to: QIKHMVFEGCKTLKYKDRIGPMI*RALLGF
Trigger: AAATCCAAGCAATGCCCTGCAGATCATGGGACCTAT...TCGGTCCTTGTATTTGAGGGTTTTGCATCCCTCAAATACCATATGTTTTATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
3UTR-3UTR CCA 90 bp AAGCATATACCACAGAGAGAGCCTTATATGTACAAAAAGGGCTCATGTAGGATGGAACGAGAATGCTACTaGTGTTCATATTCAAACCAC +
Preference number: 2 (lower is better)
Translates to: KHIPQREPYMYKKGSCRMERECY*CSYSNH
Trigger: GTGGTTTGAATATGAACACCAGTAGCATTCTCGTTC...CATCCTACATGAGCCCTTTTTGTACATATAAGGCTCTCTCTGTGGTATATGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
3UTR-3UTR TCA 90 bp CAAATAAAACATATGGTATTTGAGGGATGCAAAACCCTCAAATACAAGGACCGAAAAGTGGAGATATACTaGCTAGTCAGTAGTGCTAGC +
Preference number: 2 (lower is better)
Translates to: QIKHMVFEGCKTLKYKDRKVEIY*LVSSAS
Trigger: GCTAGCACTACTGACTAGTCAGTATATCTCCACTTT...TCGGTCCTTGTATTTGAGGGTTTTGCATCCCTCAAATACCATATGTTTTATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
3UTR-3UTR TCA 90 bp CAAATAAAACATATGGTATTTGAGGGATGCAAAACCCTCAAATACAAGGACCGAAACCACTGTGTTTCATaGAAGACCCAACTTTTGAGG +
Preference number: 2 (lower is better)
Translates to: QIKHMVFEGCKTLKYKDRNHCVS*KTQLLR
Trigger: CCTCAAAAGTTGGGTCTTTCATGAAACACAGTGGTT...TCGGTCCTTGTATTTGAGGGTTTTGCATCCCTCAAATACCATATGTTTTATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
3UTR-3UTR TCA 90 bp AAGCATATACCACAGAGAGAGCCTTATATGTACAAAAAGGGCTCATGTAGGATGGATGGAAACAGTACATaGAAGGTTCTAGAAGATTAC +
Preference number: 2 (lower is better)
Translates to: KHIPQREPYMYKKGSCRMDGNST*KVLEDY
Trigger: GTAATCTTCTAGAACCTTTCATGTACTGTTTCCATC...CATCCTACATGAGCCCTTTTTGTACATATAAGGCTCTCTCTGTGGTATATGCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
3UTR-3UTR CCA 90 bp AAGCATATACCACAGAGAGAGCCTTATATGTACAAAAAGGGCTCATGTAGGATGTCCCTTACCTATCCTTaGTATCAGTTTAACCATCTA +
Preference number: 2 (lower is better)
Translates to: KHIPQREPYMYKKGSCRMSLTYP*YQFNHL
Trigger: TAGATGGTTAAACTGATACCAAGGATAGGTAAGGGA...CATCCTACATGAGCCCTTTTTGTACATATAAGGCTCTCTCTGTGGTATATGCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
3UTR-3UTR CCA 90 bp GGGCTACCTGGGTTTGCAATGGTTGTGAAAGAAAAGTATACTCAGCATTTTCTTTCCCTTACCTATCCTTaGTATCAGTTTAACCATCTA +
Preference number: 2 (lower is better)
Translates to: GLPGFAMVVKEKYTQHFLSLTYP*YQFNHL
Trigger: TAGATGGTTAAACTGATACCAAGGATAGGTAAGGGA...AAGAAAATGCTGAGTATACTTTTCTTTCACAACCATTGCAAACCCAGGTAGCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
3UTR-3UTR TCA 90 bp TATATGTACAAAAAGGGCTCATGTAGGATGATGTTCCTTTCAGCATTGTTTGTAAAAGTGGAGATATACTaGCTAGTCAGTAGTGCTAGC +
Preference number: 2 (lower is better)
Translates to: YMYKKGSCRMMFLSALFVKVEIY*LVSSAS
Trigger: GCTAGCACTACTGACTAGTCAGTATATCTCCACTTT...TACAAACAATGCTGAAAGGAACATCATCCTACATGAGCCCTTTTTGTACATATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
3UTR-3UTR TCA 90 bp TATATGTACAAAAAGGGCTCATGTAGGATGATGTTCCTTTCAGCATTGTTTGTAGGCTGTGCTAGAAGATaGTTAGTTTATCCTCCAACT +
Preference number: 2 (lower is better)
Translates to: YMYKKGSCRMMFLSALFVGCARR*LVYPPT
Trigger: AGTTGGAGGATAAACTAATCATCTTCTAGCACAGCC...TACAAACAATGCTGAAAGGAACATCATCCTACATGAGCCCTTTTTGTACATATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
3UTR-3UTR TCA 90 bp CAAATAAAACATATGGTATTTGAGGGATGCAAAACCCTCAAATACAAGGACCGACACATTTCTGATCCATaGACAACTTCCTTTCAGTAC +
Preference number: 2 (lower is better)
Translates to: QIKHMVFEGCKTLKYKDRHISDP*TTSFQY
Trigger: GTACTGAAAGGAAGTTGTTCATGGATCAGAAATGTG...TCGGTCCTTGTATTTGAGGGTTTTGCATCCCTCAAATACCATATGTTTTATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
3UTR-3UTR TCA 90 bp CAAATAAAACATATGGTATTTGAGGGATGCAAAACCCTCAAATACAAGGACCGAAGAGGATATTGGGACTaGAGATGGTTTTCAAAAAGC +
Preference number: 2 (lower is better)
Translates to: QIKHMVFEGCKTLKYKDRRGYWD*RWFSKS
Trigger: GCTTTTTGAAAACCATCTTCAGTCCCAATATCCTCT...TCGGTCCTTGTATTTGAGGGTTTTGCATCCCTCAAATACCATATGTTTTATTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
3UTR-3UTR TCA 90 bp CAAATAAAACATATGGTATTTGAGGGATGCAAAACCCTCAAATACAAGGACCGAGGTTATACTCTGGCCTaGAATTCAAATCCTAAGCAT +
Preference number: 2 (lower is better)
Translates to: QIKHMVFEGCKTLKYKDRGYTLA*NSNPKH
Trigger: ATGCTTAGGATTTGAATTTCAGGCCAGAGTATAACC...TCGGTCCTTGTATTTGAGGGTTTTGCATCCCTCAAATACCATATGTTTTATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
3UTR-3UTR TCA 90 bp CAAATAAAACATATGGTATTTGAGGGATGCAAAACCCTCAAATACAAGGACCGAGGCTTTACCCAAATCTaGGAACATACCAAAGTAATG +
Preference number: 2 (lower is better)
Translates to: QIKHMVFEGCKTLKYKDRGFTQI*EHTKVM
Trigger: CATTACTTTGGTATGTTCTCAGATTTGGGTAAAGCC...TCGGTCCTTGTATTTGAGGGTTTTGCATCCCTCAAATACCATATGTTTTATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
3UTR-3UTR GCA 90 bp CAAATAAAACATATGGTATTTGAGGGATGCAAAACCCTCAAATACAAGGACCGATGTTATCTACATGTCTaGAGTGTCAGTAAAAGGCCA +
Preference number: 2 (lower is better)
Translates to: QIKHMVFEGCKTLKYKDRCYLHV*SVSKRP
Trigger: TGGCCTTTTACTGACACTGCAGACATGTAGATAACA...TCGGTCCTTGTATTTGAGGGTTTTGCATCCCTCAAATACCATATGTTTTATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
3UTR-3UTR CCA 90 bp CTAACAACGAACGAGAATGCTACTGGTGTTCATATTCAAACCACTGTGTTTCATTCTTCCAATGGAATTTaGAATTTCCCTTACCTATCC +
Preference number: 2 (lower is better)
Translates to: LTTNENATGVHIQTTVFHSSNGI*NFPYLS
Trigger: GGATAGGTAAGGGAAATTCCAAATTCCATTGGAAGA...ATGAAACACAGTGGTTTGAATATGAACACCAGTAGCATTCTCGTTCGTTGTTAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
3UTR-3UTR CCA 90 bp CTAACAACGAACGAGAATGCTACTGGTGTTCATATTCAAACCACTGTGTTTCATAAGGCCATCTTCCAATaGAATTTGGAATTTCCCTTA +
Preference number: 2 (lower is better)
Translates to: LTTNENATGVHIQTTVFHKAIFQ*NLEFPL
Trigger: TAAGGGAAATTCCAAATTCCATTGGAAGATGGCCTT...ATGAAACACAGTGGTTTGAATATGAACACCAGTAGCATTCTCGTTCGTTGTTAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
3UTR-3UTR CCA 90 bp CAAATAAAACATATGGTATTTGAGGGATGCAAAACCCTCAAATACAAGGACCGAGAACGAGAATGCTACTaGTGTTCATATTCAAACCAC +
Preference number: 2 (lower is better)
Translates to: QIKHMVFEGCKTLKYKDRERECY*CSYSNH
Trigger: GTGGTTTGAATATGAACACCAGTAGCATTCTCGTTC...TCGGTCCTTGTATTTGAGGGTTTTGCATCCCTCAAATACCATATGTTTTATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
3UTR-3UTR CCA 90 bp CAAATAAAACATATGGTATTTGAGGGATGCAAAACCCTCAAATACAAGGACCGATTGATACAGCCATTCTaGAACCCAAATGGAAGTATC +
Preference number: 2 (lower is better)
Translates to: QIKHMVFEGCKTLKYKDRLIQPF*NPNGSI
Trigger: GATACTTCCATTTGGGTTCCAGAATGGCTGTATCAA...TCGGTCCTTGTATTTGAGGGTTTTGCATCCCTCAAATACCATATGTTTTATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
3UTR-3UTR TCA 90 bp TATATGTACAAAAAGGGCTCATGTAGGATGATGTTCCTTTCAGCATTGTTTGTAAGCAATACTTCACAGTaGACATGCAGCATCTCTTTA +
Preference number: 2 (lower is better)
Translates to: YMYKKGSCRMMFLSALFVSNTSQ*TCSISL
Trigger: TAAAGAGATGCTGCATGTTCACTGTGAAGTATTGCT...TACAAACAATGCTGAAAGGAACATCATCCTACATGAGCCCTTTTTGTACATATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
3UTR-3UTR TCA 90 bp TATATGTACAAAAAGGGCTCATGTAGGATGATGTTCCTTTCAGCATTGTTTGTAAGAGGATATTGGGACTaGAGATGGTTTTCAAAAAGC +
Preference number: 2 (lower is better)
Translates to: YMYKKGSCRMMFLSALFVRGYWD*RWFSKS
Trigger: GCTTTTTGAAAACCATCTTCAGTCCCAATATCCTCT...TACAAACAATGCTGAAAGGAACATCATCCTACATGAGCCCTTTTTGTACATATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
3UTR-3UTR GCA 90 bp TATATGTACAAAAAGGGCTCATGTAGGATGATGTTCCTTTCAGCATTGTTTGTATGTTATCTACATGTCTaGAGTGTCAGTAAAAGGCCA +
Preference number: 2 (lower is better)
Translates to: YMYKKGSCRMMFLSALFVCYLHV*SVSKRP
Trigger: TGGCCTTTTACTGACACTGCAGACATGTAGATAACA...TACAAACAATGCTGAAAGGAACATCATCCTACATGAGCCCTTTTTGTACATATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
3UTR-3UTR CCA 90 bp CAAATAAAACATATGGTATTTGAGGGATGCAAAACCCTCAAATACAAGGACCGATCTTCCAATGGAATTTaGAATTTCCCTTACCTATCC +
Preference number: 2 (lower is better)
Translates to: QIKHMVFEGCKTLKYKDRSSNGI*NFPYLS
Trigger: GGATAGGTAAGGGAAATTCCAAATTCCATTGGAAGA...TCGGTCCTTGTATTTGAGGGTTTTGCATCCCTCAAATACCATATGTTTTATTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
3UTR-3UTR CCA 90 bp CAAATAAAACATATGGTATTTGAGGGATGCAAAACCCTCAAATACAAGGACCGAATTTTGAACAGATATTaGAAGCAGCGCTGTTTCACT +
Preference number: 2 (lower is better)
Translates to: QIKHMVFEGCKTLKYKDRILNRY*KQRCFT
Trigger: AGTGAAACAGCGCTGCTTCCAATATCTGTTCAAAAT...TCGGTCCTTGTATTTGAGGGTTTTGCATCCCTCAAATACCATATGTTTTATTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
3UTR-3UTR CAA 90 bp CTAACAACGAACGAGAATGCTACTGGTGTTCATATTCAAACCACTGTGTTTCATCTACAGCGACTTGCCTaGGGCAAGGAAGGGCCTCCC +
Preference number: 3 (lower is better)
Translates to: LTTNENATGVHIQTTVFHLQRLA*GKEGPP
Trigger: GGGAGGCCCTTCCTTGCCCAAGGCAAGTCGCTGTAG...ATGAAACACAGTGGTTTGAATATGAACACCAGTAGCATTCTCGTTCGTTGTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
3UTR GCA 72 bp AAGGACCGACTTTTCATATGCATAGGTCCCATGATCTaGAGGGCATTGCTTGGATTTTGGTATCCACAGGGG +
Preference number: 3 (lower is better)
Translates to: KDRLFICIGPMI*RALLGFWYPQG
Trigger: CCCCTGTGGATACCAAAATCCAAGCAATGCCCTGCAGATCATGGGACCTATGCATATGAAAAGTCGGTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
3UTR-3UTR CAA 90 bp CTTCCAATGGAATTTGGAATTTCCCTTACCTATCCTTGGTATCAGTTTAACCATCTACAGCGACTTGCCTaGGGCAAGGAAGGGCCTCCC +
Preference number: 3 (lower is better)
Translates to: LPMEFGISLTYPWYQFNHLQRLA*GKEGPP
Trigger: GGGAGGCCCTTCCTTGCCCAAGGCAAGTCGCTGTAG...ATGGTTAAACTGATACCAAGGATAGGTAAGGGAAATTCCAAATTCCATTGGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
3UTR-3UTR CAA 90 bp GGGCTACCTGGGTTTGCAATGGTTGTGAAAGAAAAGTATACTCAGCATTTTCTTACCATCTACAGCGACTaGCCTTGGGCAAGGAAGGGC +
Preference number: 3 (lower is better)
Translates to: GLPGFAMVVKEKYTQHFLTIYSD*PWARKG
Trigger: GCCCTTCCTTGCCCAAGGCAAGTCGCTGTAGATGGT...AAGAAAATGCTGAGTATACTTTTCTTTCACAACCATTGCAAACCCAGGTAGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
3UTR-3UTR CAA 90 bp TATATGTACAAAAAGGGCTCATGTAGGATGATGTTCCTTTCAGCATTGTTTGTACTACAGCGACTTGCCTaGGGCAAGGAAGGGCCTCCC +
Preference number: 3 (lower is better)
Translates to: YMYKKGSCRMMFLSALFVLQRLA*GKEGPP
Trigger: GGGAGGCCCTTCCTTGCCCAAGGCAAGTCGCTGTAG...TACAAACAATGCTGAAAGGAACATCATCCTACATGAGCCCTTTTTGTACATATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
3UTR GCA 72 bp TGCAAAACCCTCAAATACAAGGACCGACTTTTCATATaGATAGGTCCCATGATCTGCAGGGCATTGCTTGGA +
Preference number: 3 (lower is better)
Translates to: CKTLKYKDRLFI*IGPMICRALLG
Trigger: TCCAAGCAATGCCCTGCAGATCATGGGACCTATGCATATGAAAAGTCGGTCCTTGTATTTGAGGGTTTTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
3UTR-3UTR CAA 90 bp TATATGTACAAAAAGGGCTCATGTAGGATGATGTTCCTTTCAGCATTGTTTGTAACCATCTACAGCGACTaGCCTTGGGCAAGGAAGGGC +
Preference number: 3 (lower is better)
Translates to: YMYKKGSCRMMFLSALFVTIYSD*PWARKG
Trigger: GCCCTTCCTTGCCCAAGGCAAGTCGCTGTAGATGGT...TACAAACAATGCTGAAAGGAACATCATCCTACATGAGCCCTTTTTGTACATATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
3UTR TCA 72 bp TCCTCTCCTGCAACACAACAGGGCTGTGCTAGAAGATaGTTAGTTTATCCTCCAACTCTGAGAGTCAATCAT +
Preference number: 3 (lower is better)
Translates to: SSPATQQGCARR*LVYPPTLRVNH
Trigger: ATGATTGACTCTCAGAGTTGGAGGATAAACTAATCATCTTCTAGCACAGCCCTGTTGTGTTGCAGGAGAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
3UTR TCA 72 bp CTTGGGCAAGGAAGGGCCTCCCACATTTCTGATCCATaGACAACTTCCTTTCAGTACATTACAATGGAGAAA +
Preference number: 3 (lower is better)
Translates to: LGQGRASHISDP*TTSFQYITMEK
Trigger: TTTCTCCATTGTAATGTACTGAAAGGAAGTTGTTCATGGATCAGAAATGTGGGAGGCCCTTCCTTGCCCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
3UTR-3UTR CAA 90 bp AAGCATATACCACAGAGAGAGCCTTATATGTACAAAAAGGGCTCATGTAGGATGCTTCTACAGAGGATATaGGGACTGAAGATGGTTTTC +
Preference number: 3 (lower is better)
Translates to: KHIPQREPYMYKKGSCRMLLQRI*GLKMVF
Trigger: GAAAACCATCTTCAGTCCCAATATCCTCTGTAGAAG...CATCCTACATGAGCCCTTTTTGTACATATAAGGCTCTCTCTGTGGTATATGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
3UTR-3UTR CAA 90 bp CAAATAAAACATATGGTATTTGAGGGATGCAAAACCCTCAAATACAAGGACCGAGCAGATGCTCATATCTaGCTCAGGGGAACTGTAACT +
Preference number: 3 (lower is better)
Translates to: QIKHMVFEGCKTLKYKDRADAHI*LRGTVT
Trigger: AGTTACAGTTCCCCTGAGCAAGATATGAGCATCTGC...TCGGTCCTTGTATTTGAGGGTTTTGCATCCCTCAAATACCATATGTTTTATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
3UTR-3UTR CAA 90 bp GGGCTACCTGGGTTTGCAATGGTTGTGAAAGAAAAGTATACTCAGCATTTTCTTATCTTCCAATGGAATTaGGAATTTCCCTTACCTATC +
Preference number: 3 (lower is better)
Translates to: GLPGFAMVVKEKYTQHFLIFQWN*EFPLPI
Trigger: GATAGGTAAGGGAAATTCCAAATTCCATTGGAAGAT...AAGAAAATGCTGAGTATACTTTTCTTTCACAACCATTGCAAACCCAGGTAGCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
3UTR-3UTR CAA 90 bp GGGCTACCTGGGTTTGCAATGGTTGTGAAAGAAAAGTATACTCAGCATTTTCTTGAGGACATTAAACTATaGTTATCTACATGTCTGCAG +
Preference number: 3 (lower is better)
Translates to: GLPGFAMVVKEKYTQHFLEDIKL*LSTCLQ
Trigger: CTGCAGACATGTAGATAACAATAGTTTAATGTCCTC...AAGAAAATGCTGAGTATACTTTTCTTTCACAACCATTGCAAACCCAGGTAGCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
3UTR TCA 72 bp TGTGCTCACCAGCAGTTAACCAATTTTTATAGAACATaGGGAAGGCTTTACCCAAATCTGAGAACATACCAA +
Preference number: 3 (lower is better)
Translates to: CAHQQLTNFYRT*GRLYPNLRTYQ
Trigger: TTGGTATGTTCTCAGATTTGGGTAAAGCCTTCCTCATGTTCTATAAAAATTGGTTAACTGCTGGTGAGCACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
3UTR GCA 72 bp TCTACAAAACTCTCTTACCCTAACAACGAACGAGAATaGTACTGGTGTTCATATTCAAACCACTGTGTTTCA +
Preference number: 3 (lower is better)
Translates to: STKLSYPNNERE*YWCSYSNHCVS
Trigger: TGAAACACAGTGGTTTGAATATGAACACCAGTAGCATTCTCGTTCGTTGTTAGGGTAAGAGAGTTTTGTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
3UTR-3UTR CAA 90 bp CTAACAACGAACGAGAATGCTACTGGTGTTCATATTCAAACCACTGTGTTTCATATCTTCCAATGGAATTaGGAATTTCCCTTACCTATC +
Preference number: 3 (lower is better)
Translates to: LTTNENATGVHIQTTVFHIFQWN*EFPLPI
Trigger: GATAGGTAAGGGAAATTCCAAATTCCATTGGAAGAT...ATGAAACACAGTGGTTTGAATATGAACACCAGTAGCATTCTCGTTCGTTGTTAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
3UTR-3UTR CAA 90 bp TATATGTACAAAAAGGGCTCATGTAGGATGATGTTCCTTTCAGCATTGTTTGTACTTCTACAGAGGATATaGGGACTGAAGATGGTTTTC +
Preference number: 3 (lower is better)
Translates to: YMYKKGSCRMMFLSALFVLLQRI*GLKMVF
Trigger: GAAAACCATCTTCAGTCCCAATATCCTCTGTAGAAG...TACAAACAATGCTGAAAGGAACATCATCCTACATGAGCCCTTTTTGTACATATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
3UTR-3UTR CAA 90 bp CAAATAAAACATATGGTATTTGAGGGATGCAAAACCCTCAAATACAAGGACCGAATCTTCCAATGGAATTaGGAATTTCCCTTACCTATC +
Preference number: 3 (lower is better)
Translates to: QIKHMVFEGCKTLKYKDRIFQWN*EFPLPI
Trigger: GATAGGTAAGGGAAATTCCAAATTCCATTGGAAGAT...TCGGTCCTTGTATTTGAGGGTTTTGCATCCCTCAAATACCATATGTTTTATTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
3UTR-3UTR CAA 90 bp TATATGTACAAAAAGGGCTCATGTAGGATGATGTTCCTTTCAGCATTGTTTGTAGAGGACATTAAACTATaGTTATCTACATGTCTGCAG +
Preference number: 3 (lower is better)
Translates to: YMYKKGSCRMMFLSALFVEDIKL*LSTCLQ
Trigger: CTGCAGACATGTAGATAACAATAGTTTAATGTCCTC...TACAAACAATGCTGAAAGGAACATCATCCTACATGAGCCCTTTTTGTACATATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR TCA 90 bp GGGCTACCTGGGTTTGCAATGGTTGTGAAAGAAAAGTATACTCAGCATTTTCTTGGCCGTGCGCCTTTCTaGGGCCCGTTCCATTGCCGC +
Preference number: 4 (lower is better)
Translates to: GLPGFAMVVKEKYTQHFLGRAPF*GPFHCR
Trigger: GCGGCAATGGAACGGGCCTCAGAAAGGCGCACGGCC...AAGAAAATGCTGAGTATACTTTTCTTTCACAACCATTGCAAACCCAGGTAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR TCA 90 bp CTAACAACGAACGAGAATGCTACTGGTGTTCATATTCAAACCACTGTGTTTCATGGCCGTGCGCCTTTCTaGGGCCCGTTCCATTGCCGC +
Preference number: 4 (lower is better)
Translates to: LTTNENATGVHIQTTVFHGRAPF*GPFHCR
Trigger: GCGGCAATGGAACGGGCCTCAGAAAGGCGCACGGCC...ATGAAACACAGTGGTTTGAATATGAACACCAGTAGCATTCTCGTTCGTTGTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR TCA 90 bp GGGCTACCTGGGTTTGCAATGGTTGTGAAAGAAAAGTATACTCAGCATTTTCTTCTCACATGGGAGGCGTaGCTTGGGTTCCGAGGGCCA +
Preference number: 4 (lower is better)
Translates to: GLPGFAMVVKEKYTQHFLLTWEA*LGFRGP
Trigger: TGGCCCTCGGAACCCAAGTCACGCCTCCCATGTGAG...AAGAAAATGCTGAGTATACTTTTCTTTCACAACCATTGCAAACCCAGGTAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506538.6
ENST00000612402.4
CDS-3UTR TCA 90 bp CAAATAAAACATATGGTATTTGAGGGATGCAAAACCCTCAAATACAAGGACCGAGGCCGTGCGCCTTTCTaGGGCCCGTTCCATTGCCGC +
Preference number: 4 (lower is better)
Translates to: QIKHMVFEGCKTLKYKDRGRAPF*GPFHCR
Trigger: GCGGCAATGGAACGGGCCTCAGAAAGGCGCACGGCC...TCGGTCCTTGTATTTGAGGGTTTTGCATCCCTCAAATACCATATGTTTTATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR GCA 90 bp AAGCATATACCACAGAGAGAGCCTTATATGTACAAAAAGGGCTCATGTAGGATGAAAGCGCGCTGGCCGTaGGCCTTTCTGAGGCCCGTT +
Preference number: 4 (lower is better)
Translates to: KHIPQREPYMYKKGSCRMKARWP*AFLRPV
Trigger: AACGGGCCTCAGAAAGGCGCACGGCCAGCGCGCTTT...CATCCTACATGAGCCCTTTTTGTACATATAAGGCTCTCTCTGTGGTATATGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR GCA 90 bp GGGCTACCTGGGTTTGCAATGGTTGTGAAAGAAAAGTATACTCAGCATTTTCTTAAAGCGCGCTGGCCGTaGGCCTTTCTGAGGCCCGTT +
Preference number: 4 (lower is better)
Translates to: GLPGFAMVVKEKYTQHFLKARWP*AFLRPV
Trigger: AACGGGCCTCAGAAAGGCGCACGGCCAGCGCGCTTT...AAGAAAATGCTGAGTATACTTTTCTTTCACAACCATTGCAAACCCAGGTAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CCA 90 bp AAGCATATACCACAGAGAGAGCCTTATATGTACAAAAAGGGCTCATGTAGGATGCCGCAAAAAGCGCGCTaGCCGTGCGCCTTTCTGAGG +
Preference number: 4 (lower is better)
Translates to: KHIPQREPYMYKKGSCRMPQKAR*PCAFLR
Trigger: CCTCAGAAAGGCGCACGGCCAGCGCGCTTTTTGCGG...CATCCTACATGAGCCCTTTTTGTACATATAAGGCTCTCTCTGTGGTATATGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
3UTR CAA 72 bp CCTTGGTATCAGTTTAACCATCTACAGCGACTTGCCTaGGGCAAGGAAGGGCCTCCCACATTTCTGATCCAT +
Preference number: 4 (lower is better)
Translates to: PWYQFNHLQRLA*GKEGPPTFLIH
Trigger: ATGGATCAGAAATGTGGGAGGCCCTTCCTTGCCCAAGGCAAGTCGCTGTAGATGGTTAAACTGATACCAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR GCA 90 bp CAAATAAAACATATGGTATTTGAGGGATGCAAAACCCTCAAATACAAGGACCGAGCTTCCGGCGCCCGCTaGGAATCGCGTTTCCGGAGA +
Preference number: 4 (lower is better)
Translates to: QIKHMVFEGCKTLKYKDRASGAR*ESRFRR
Trigger: TCTCCGGAAACGCGATTCGCAGCGGGCGCCGGAAGC...TCGGTCCTTGTATTTGAGGGTTTTGCATCCCTCAAATACCATATGTTTTATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506538.6
ENST00000612402.4
CDS-3UTR GCA 90 bp CTTCCAATGGAATTTGGAATTTCCCTTACCTATCCTTGGTATCAGTTTAACCATGCTTCCGGCGCCCGCTaGGAATCGCGTTTCCGGAGA +
Preference number: 4 (lower is better)
Translates to: LPMEFGISLTYPWYQFNHASGAR*ESRFRR
Trigger: TCTCCGGAAACGCGATTCGCAGCGGGCGCCGGAAGC...ATGGTTAAACTGATACCAAGGATAGGTAAGGGAAATTCCAAATTCCATTGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506538.6
ENST00000612402.4
CDS-3UTR GCA 90 bp CTAACAACGAACGAGAATGCTACTGGTGTTCATATTCAAACCACTGTGTTTCATAAAGCGCGCTGGCCGTaGGCCTTTCTGAGGCCCGTT +
Preference number: 4 (lower is better)
Translates to: LTTNENATGVHIQTTVFHKARWP*AFLRPV
Trigger: AACGGGCCTCAGAAAGGCGCACGGCCAGCGCGCTTT...ATGAAACACAGTGGTTTGAATATGAACACCAGTAGCATTCTCGTTCGTTGTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR TCA 90 bp CAAATAAAACATATGGTATTTGAGGGATGCAAAACCCTCAAATACAAGGACCGACTCACATGGGAGGCGTaGCTTGGGTTCCGAGGGCCA +
Preference number: 4 (lower is better)
Translates to: QIKHMVFEGCKTLKYKDRLTWEA*LGFRGP
Trigger: TGGCCCTCGGAACCCAAGTCACGCCTCCCATGTGAG...TCGGTCCTTGTATTTGAGGGTTTTGCATCCCTCAAATACCATATGTTTTATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506538.6
ENST00000612402.4
CDS-3UTR TCA 90 bp GGGCTACCTGGGTTTGCAATGGTTGTGAAAGAAAAGTATACTCAGCATTTTCTTACGGCTGGTGCCTGCTaGAGAGCTGTCACTCCAACT +
Preference number: 4 (lower is better)
Translates to: GLPGFAMVVKEKYTQHFLTAGAC*RAVTPT
Trigger: AGTTGGAGTGACAGCTCTTCAGCAGGCACCAGCCGT...AAGAAAATGCTGAGTATACTTTTCTTTCACAACCATTGCAAACCCAGGTAGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR GCA 90 bp AAGCATATACCACAGAGAGAGCCTTATATGTACAAAAAGGGCTCATGTAGGATGGTCCTCTGCCAGAGCTaGAGACACAACACCGCTTCC +
Preference number: 4 (lower is better)
Translates to: KHIPQREPYMYKKGSCRMVLCQS*RHNTAS
Trigger: GGAAGCGGTGTTGTGTCTGCAGCTCTGGCAGAGGAC...CATCCTACATGAGCCCTTTTTGTACATATAAGGCTCTCTCTGTGGTATATGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000506538.6
ENST00000612402.4
CDS-3UTR CCA 90 bp CTAACAACGAACGAGAATGCTACTGGTGTTCATATTCAAACCACTGTGTTTCATATGGGAGGCGTGACTTaGGTTCCGAGGGCCAAGGTC +
Preference number: 4 (lower is better)
Translates to: LTTNENATGVHIQTTVFHMGGVT*VPRAKV
Trigger: GACCTTGGCCCTCGGAACCCAAGTCACGCCTCCCAT...ATGAAACACAGTGGTTTGAATATGAACACCAGTAGCATTCTCGTTCGTTGTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506538.6
ENST00000612402.4
CDS-3UTR CCA 90 bp CAAATAAAACATATGGTATTTGAGGGATGCAAAACCCTCAAATACAAGGACCGACCGCAAAAAGCGCGCTaGCCGTGCGCCTTTCTGAGG +
Preference number: 4 (lower is better)
Translates to: QIKHMVFEGCKTLKYKDRPQKAR*PCAFLR
Trigger: CCTCAGAAAGGCGCACGGCCAGCGCGCTTTTTGCGG...TCGGTCCTTGTATTTGAGGGTTTTGCATCCCTCAAATACCATATGTTTTATTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CCA 90 bp CTTCCAATGGAATTTGGAATTTCCCTTACCTATCCTTGGTATCAGTTTAACCATCCGCAAAAAGCGCGCTaGCCGTGCGCCTTTCTGAGG +
Preference number: 4 (lower is better)
Translates to: LPMEFGISLTYPWYQFNHPQKAR*PCAFLR
Trigger: CCTCAGAAAGGCGCACGGCCAGCGCGCTTTTTGCGG...ATGGTTAAACTGATACCAAGGATAGGTAAGGGAAATTCCAAATTCCATTGGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR TCA 90 bp GGGCTACCTGGGTTTGCAATGGTTGTGAAAGAAAAGTATACTCAGCATTTTCTTGTGGAATGTCGTTGCTaGAAAGTCCCAAGGCCCGGA +
Preference number: 4 (lower is better)
Translates to: GLPGFAMVVKEKYTQHFLVECRC*KVPRPG
Trigger: TCCGGGCCTTGGGACTTTTCAGCAACGACATTCCAC...AAGAAAATGCTGAGTATACTTTTCTTTCACAACCATTGCAAACCCAGGTAGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR GCA 90 bp CTAACAACGAACGAGAATGCTACTGGTGTTCATATTCAAACCACTGTGTTTCATCCATCTACAGCGACTTaGCTTGGGCAAGGAAGGGCC +
Preference number: 4 (lower is better)
Translates to: LTTNENATGVHIQTTVFHPSTAT*LGQGRA
Trigger: GGCCCTTCCTTGCCCAAGGCAAGTCGCTGTAGATGG...ATGAAACACAGTGGTTTGAATATGAACACCAGTAGCATTCTCGTTCGTTGTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CCA 90 bp CTTCCAATGGAATTTGGAATTTCCCTTACCTATCCTTGGTATCAGTTTAACCATATGGGAGGCGTGACTTaGGTTCCGAGGGCCAAGGTC +
Preference number: 4 (lower is better)
Translates to: LPMEFGISLTYPWYQFNHMGGVT*VPRAKV
Trigger: GACCTTGGCCCTCGGAACCCAAGTCACGCCTCCCAT...ATGGTTAAACTGATACCAAGGATAGGTAAGGGAAATTCCAAATTCCATTGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506538.6
ENST00000612402.4
CDS-3UTR TCA 90 bp CTAACAACGAACGAGAATGCTACTGGTGTTCATATTCAAACCACTGTGTTTCATGTGGAATGTCGTTGCTaGAAAGTCCCAAGGCCCGGA +
Preference number: 4 (lower is better)
Translates to: LTTNENATGVHIQTTVFHVECRC*KVPRPG
Trigger: TCCGGGCCTTGGGACTTTTCAGCAACGACATTCCAC...ATGAAACACAGTGGTTTGAATATGAACACCAGTAGCATTCTCGTTCGTTGTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CCA 90 bp AAGCATATACCACAGAGAGAGCCTTATATGTACAAAAAGGGCTCATGTAGGATGTCCCAGAGTCCAATATaGCCACATGGGCTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: KHIPQREPYMYKKGSCRMSQSPI*PHGLPA
Trigger: AGCTGGAAGCCCATGTGGCCATATTGGACTCTGGGA...CATCCTACATGAGCCCTTTTTGTACATATAAGGCTCTCTCTGTGGTATATGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CCA 90 bp GGGCTACCTGGGTTTGCAATGGTTGTGAAAGAAAAGTATACTCAGCATTTTCTTTCCCAGAGTCCAATATaGCCACATGGGCTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: GLPGFAMVVKEKYTQHFLSQSPI*PHGLPA
Trigger: AGCTGGAAGCCCATGTGGCCATATTGGACTCTGGGA...AAGAAAATGCTGAGTATACTTTTCTTTCACAACCATTGCAAACCCAGGTAGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR TCA 90 bp TATATGTACAAAAAGGGCTCATGTAGGATGATGTTCCTTTCAGCATTGTTTGTAACGGCTGGTGCCTGCTaGAGAGCTGTCACTCCAACT +
Preference number: 4 (lower is better)
Translates to: YMYKKGSCRMMFLSALFVTAGAC*RAVTPT
Trigger: AGTTGGAGTGACAGCTCTTCAGCAGGCACCAGCCGT...TACAAACAATGCTGAAAGGAACATCATCCTACATGAGCCCTTTTTGTACATATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR TCA 90 bp GGGCTACCTGGGTTTGCAATGGTTGTGAAAGAAAAGTATACTCAGCATTTTCTTGGGTGGAAGTCTCACTaGCATGGTATTCTGAAGTCC +
Preference number: 4 (lower is better)
Translates to: GLPGFAMVVKEKYTQHFLGWKSH*HGILKS
Trigger: GGACTTCAGAATACCATGTCAGTGAGACTTCCACCC...AAGAAAATGCTGAGTATACTTTTCTTTCACAACCATTGCAAACCCAGGTAGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR TCA 90 bp AAGCATATACCACAGAGAGAGCCTTATATGTACAAAAAGGGCTCATGTAGGATGGGGTGGAAGTCTCACTaGCATGGTATTCTGAAGTCC +
Preference number: 4 (lower is better)
Translates to: KHIPQREPYMYKKGSCRMGWKSH*HGILKS
Trigger: GGACTTCAGAATACCATGTCAGTGAGACTTCCACCC...CATCCTACATGAGCCCTTTTTGTACATATAAGGCTCTCTCTGTGGTATATGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR TCA 90 bp GGGCTACCTGGGTTTGCAATGGTTGTGAAAGAAAAGTATACTCAGCATTTTCTTCTGCTGCAAACTTTGTaGTGGGTGGAAGTCTCACTG +
Preference number: 4 (lower is better)
Translates to: GLPGFAMVVKEKYTQHFLLLQTL*WVEVSL
Trigger: CAGTGAGACTTCCACCCATCACAAAGTTTGCAGCAG...AAGAAAATGCTGAGTATACTTTTCTTTCACAACCATTGCAAACCCAGGTAGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR GCA 90 bp GGGCTACCTGGGTTTGCAATGGTTGTGAAAGAAAAGTATACTCAGCATTTTCTTGTTCTCCAGCTCTTTTaGGGTGGAAGGAAGCTCGTT +
Preference number: 4 (lower is better)
Translates to: GLPGFAMVVKEKYTQHFLVLQLF*GGRKLV
Trigger: AACGAGCTTCCTTCCACCGCAAAAGAGCTGGAGAAC...AAGAAAATGCTGAGTATACTTTTCTTTCACAACCATTGCAAACCCAGGTAGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000506538.6
ENST00000612402.4
CDS-3UTR GCA 90 bp TATATGTACAAAAAGGGCTCATGTAGGATGATGTTCCTTTCAGCATTGTTTGTAGTCCTCTGCCAGAGCTaGAGACACAACACCGCTTCC +
Preference number: 4 (lower is better)
Translates to: YMYKKGSCRMMFLSALFVVLCQS*RHNTAS
Trigger: GGAAGCGGTGTTGTGTCTGCAGCTCTGGCAGAGGAC...TACAAACAATGCTGAAAGGAACATCATCCTACATGAGCCCTTTTTGTACATATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000506538.6
ENST00000612402.4
CDS-3UTR GCA 90 bp GGGCTACCTGGGTTTGCAATGGTTGTGAAAGAAAAGTATACTCAGCATTTTCTTACATGGGCTTCCAGCTaGCATTACTGGATGACCATC +
Preference number: 4 (lower is better)
Translates to: GLPGFAMVVKEKYTQHFLTWASS*HYWMTI
Trigger: GATGGTCATCCAGTAATGGCAGCTGGAAGCCCATGT...AAGAAAATGCTGAGTATACTTTTCTTTCACAACCATTGCAAACCCAGGTAGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR GCA 90 bp AAGCATATACCACAGAGAGAGCCTTATATGTACAAAAAGGGCTCATGTAGGATGACGAGCTTCCTCTGCTaGAAACTTTGTGATGGGTGG +
Preference number: 4 (lower is better)
Translates to: KHIPQREPYMYKKGSCRMTSFLC*KLCDGW
Trigger: CCACCCATCACAAAGTTTGCAGCAGAGGAAGCTCGT...CATCCTACATGAGCCCTTTTTGTACATATAAGGCTCTCTCTGTGGTATATGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR GCA 90 bp CTAACAACGAACGAGAATGCTACTGGTGTTCATATTCAAACCACTGTGTTTCATAGGCGAGTCCCAGAATaGCACTGTCCCTATGTAGCA +
Preference number: 4 (lower is better)
Translates to: LTTNENATGVHIQTTVFHRRVPE*HCPYVA
Trigger: TGCTACATAGGGACAGTGGCATTCTGGGACTCGCCT...ATGAAACACAGTGGTTTGAATATGAACACCAGTAGCATTCTCGTTCGTTGTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR GCA 90 bp GGGCTACCTGGGTTTGCAATGGTTGTGAAAGAAAAGTATACTCAGCATTTTCTTGTCCACATGGGAAGTTaGCAGAAAGTCTCCAGTAGG +
Preference number: 4 (lower is better)
Translates to: GLPGFAMVVKEKYTQHFLVHMGS*QKVSSR
Trigger: CCTACTGGAGACTTTCTGGCAACTTCCCATGTGGAC...AAGAAAATGCTGAGTATACTTTTCTTTCACAACCATTGCAAACCCAGGTAGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR GCA 90 bp AAGCATATACCACAGAGAGAGCCTTATATGTACAAAAAGGGCTCATGTAGGATGACATGGGGAAGCAGATaGTCATATCTTGCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: KHIPQREPYMYKKGSCRMTWGSR*SYLAQG
Trigger: CCCCTGAGCAAGATATGAGCATCTGCTTCCCCATGT...CATCCTACATGAGCCCTTTTTGTACATATAAGGCTCTCTCTGTGGTATATGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CCA 90 bp GGGCTACCTGGGTTTGCAATGGTTGTGAAAGAAAAGTATACTCAGCATTTTCTTGAACCGCACCACGTGTaGAATGTCGTTGCTGAAAAG +
Preference number: 4 (lower is better)
Translates to: GLPGFAMVVKEKYTQHFLEPHHV*NVVAEK
Trigger: CTTTTCAGCAACGACATTCCACACGTGGTGCGGTTC...AAGAAAATGCTGAGTATACTTTTCTTTCACAACCATTGCAAACCCAGGTAGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CCA 90 bp CTAACAACGAACGAGAATGCTACTGGTGTTCATATTCAAACCACTGTGTTTCATAACAACATCCACGGCTaGTGCCTGCTGAAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: LTTNENATGVHIQTTVFHNNIHG*CLLKSC
Trigger: ACAGCTCTTCAGCAGGCACCAGCCGTGGATGTTGTT...ATGAAACACAGTGGTTTGAATATGAACACCAGTAGCATTCTCGTTCGTTGTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CCA 90 bp AAGCATATACCACAGAGAGAGCCTTATATGTACAAAAAGGGCTCATGTAGGATGCCAAGGTGGTCCACATaGGAAGTTGCCAGAAAGTCT +
Preference number: 4 (lower is better)
Translates to: KHIPQREPYMYKKGSCRMPRWST*EVARKS
Trigger: AGACTTTCTGGCAACTTCCCATGTGGACCACCTTGG...CATCCTACATGAGCCCTTTTTGTACATATAAGGCTCTCTCTGTGGTATATGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CCA 90 bp GGGCTACCTGGGTTTGCAATGGTTGTGAAAGAAAAGTATACTCAGCATTTTCTTCAGGTGCAGCATATCTaGGTACAAGGCCAGGAATTG +
Preference number: 4 (lower is better)
Translates to: GLPGFAMVVKEKYTQHFLQVQHI*VQGQEL
Trigger: CAATTCCTGGCCTTGTACCCAGATATGCTGCACCTG...AAGAAAATGCTGAGTATACTTTTCTTTCACAACCATTGCAAACCCAGGTAGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CCA 90 bp AAGCATATACCACAGAGAGAGCCTTATATGTACAAAAAGGGCTCATGTAGGATGGCATTGCTTGGATTTTaGTATCCACAGGGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: KHIPQREPYMYKKGSCRMALLGF*YPQGSW
Trigger: CCAGGACCCCTGTGGATACCAAAATCCAAGCAATGC...CATCCTACATGAGCCCTTTTTGTACATATAAGGCTCTCTCTGTGGTATATGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR TCA 90 bp AAGCATATACCACAGAGAGAGCCTTATATGTACAAAAAGGGCTCATGTAGGATGGCTGCCATTACTGGATaGCCATCTGTGCGAAATGAA +
Preference number: 4 (lower is better)
Translates to: KHIPQREPYMYKKGSCRMAAITG*PSVRNE
Trigger: TTCATTTCGCACAGATGGTCATCCAGTAATGGCAGC...CATCCTACATGAGCCCTTTTTGTACATATAAGGCTCTCTCTGTGGTATATGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR TCA 90 bp GGGCTACCTGGGTTTGCAATGGTTGTGAAAGAAAAGTATACTCAGCATTTTCTTGCTGCCATTACTGGATaGCCATCTGTGCGAAATGAA +
Preference number: 4 (lower is better)
Translates to: GLPGFAMVVKEKYTQHFLAAITG*PSVRNE
Trigger: TTCATTTCGCACAGATGGTCATCCAGTAATGGCAGC...AAGAAAATGCTGAGTATACTTTTCTTTCACAACCATTGCAAACCCAGGTAGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR TCA 90 bp CTAACAACGAACGAGAATGCTACTGGTGTTCATATTCAAACCACTGTGTTTCATCTGCTGCAAACTTTGTaGTGGGTGGAAGTCTCACTG +
Preference number: 4 (lower is better)
Translates to: LTTNENATGVHIQTTVFHLLQTL*WVEVSL
Trigger: CAGTGAGACTTCCACCCATCACAAAGTTTGCAGCAG...ATGAAACACAGTGGTTTGAATATGAACACCAGTAGCATTCTCGTTCGTTGTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR TCA 90 bp AAGCATATACCACAGAGAGAGCCTTATATGTACAAAAAGGGCTCATGTAGGATGGGCCTCCCACATTTCTaGTCCATGAACAACTTCCTT +
Preference number: 4 (lower is better)
Translates to: KHIPQREPYMYKKGSCRMGLPHF*SMNNFL
Trigger: AAGGAAGTTGTTCATGGATCAGAAATGTGGGAGGCC...CATCCTACATGAGCCCTTTTTGTACATATAAGGCTCTCTCTGTGGTATATGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR TCA 90 bp AAGCATATACCACAGAGAGAGCCTTATATGTACAAAAAGGGCTCATGTAGGATGAGGGGAACTGTAACTTaGTACAGCCATTCTGGAACC +
Preference number: 4 (lower is better)
Translates to: KHIPQREPYMYKKGSCRMRGTVT*YSHSGT
Trigger: GGTTCCAGAATGGCTGTATCAAGTTACAGTTCCCCT...CATCCTACATGAGCCCTTTTTGTACATATAAGGCTCTCTCTGTGGTATATGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR GCA 90 bp CTTCCAATGGAATTTGGAATTTCCCTTACCTATCCTTGGTATCAGTTTAACCATTTGTGGGGAGGGAACTaGTCACTTGGGCAACTTGGA +
Preference number: 4 (lower is better)
Translates to: LPMEFGISLTYPWYQFNHLWGGN*SLGQLG
Trigger: TCCAAGTTGCCCAAGTGAGCAGTTCCCTCCCCACAA...ATGGTTAAACTGATACCAAGGATAGGTAAGGGAAATTCCAAATTCCATTGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506538.6
CDS-3UTR GCA 90 bp AAGCATATACCACAGAGAGAGCCTTATATGTACAAAAAGGGCTCATGTAGGATGAGGTGTGGAAACTCTTaGCCACGCAGGTTGTTACAT +
Preference number: 4 (lower is better)
Translates to: KHIPQREPYMYKKGSCRMRCGNS*PRRLLH
Trigger: ATGTAACAACCTGCGTGGGCAAGAGTTTCCACACCT...CATCCTACATGAGCCCTTTTTGTACATATAAGGCTCTCTCTGTGGTATATGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR GCA 90 bp AAGCATATACCACAGAGAGAGCCTTATATGTACAAAAAGGGCTCATGTAGGATGCAGCAAAGACTAATCTaGCATCAGCTGCCATACAGC +
Preference number: 4 (lower is better)
Translates to: KHIPQREPYMYKKGSCRMQQRLI*HQLPYS
Trigger: GCTGTATGGCAGCTGATGGCAGATTAGTCTTTGCTG...CATCCTACATGAGCCCTTTTTGTACATATAAGGCTCTCTCTGTGGTATATGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR GCA 90 bp CTAACAACGAACGAGAATGCTACTGGTGTTCATATTCAAACCACTGTGTTTCATACGAGCTTCCTCTGCTaGAAACTTTGTGATGGGTGG +
Preference number: 4 (lower is better)
Translates to: LTTNENATGVHIQTTVFHTSFLC*KLCDGW
Trigger: CCACCCATCACAAAGTTTGCAGCAGAGGAAGCTCGT...ATGAAACACAGTGGTTTGAATATGAACACCAGTAGCATTCTCGTTCGTTGTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR GCA 90 bp CAAATAAAACATATGGTATTTGAGGGATGCAAAACCCTCAAATACAAGGACCGAAGGCGAGTCCCAGAATaGCACTGTCCCTATGTAGCA +
Preference number: 4 (lower is better)
Translates to: QIKHMVFEGCKTLKYKDRRRVPE*HCPYVA
Trigger: TGCTACATAGGGACAGTGGCATTCTGGGACTCGCCT...TCGGTCCTTGTATTTGAGGGTTTTGCATCCCTCAAATACCATATGTTTTATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR GCA 90 bp CTAACAACGAACGAGAATGCTACTGGTGTTCATATTCAAACCACTGTGTTTCATACATGGGGAAGCAGATaGTCATATCTTGCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: LTTNENATGVHIQTTVFHTWGSR*SYLAQG
Trigger: CCCCTGAGCAAGATATGAGCATCTGCTTCCCCATGT...ATGAAACACAGTGGTTTGAATATGAACACCAGTAGCATTCTCGTTCGTTGTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CCA 90 bp AAGCATATACCACAGAGAGAGCCTTATATGTACAAAAAGGGCTCATGTAGGATGGGGAGGTCGACGCCTTaGAGATGGAAACGATTTAAA +
Preference number: 4 (lower is better)
Translates to: KHIPQREPYMYKKGSCRMGRSTP*RWKRFK
Trigger: TTTAAATCGTTTCCATCTCCAAGGCGTCGACCTCCC...CATCCTACATGAGCCCTTTTTGTACATATAAGGCTCTCTCTGTGGTATATGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506538.6
CDS-3UTR CCA 90 bp CTTCCAATGGAATTTGGAATTTCCCTTACCTATCCTTGGTATCAGTTTAACCATAACAACATCCACGGCTaGTGCCTGCTGAAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: LPMEFGISLTYPWYQFNHNNIHG*CLLKSC
Trigger: ACAGCTCTTCAGCAGGCACCAGCCGTGGATGTTGTT...ATGGTTAAACTGATACCAAGGATAGGTAAGGGAAATTCCAAATTCCATTGGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CCA 90 bp CTAACAACGAACGAGAATGCTACTGGTGTTCATATTCAAACCACTGTGTTTCATTCCAATATGGCCACATaGGCTTCCAGCTGCCATTAC +
Preference number: 4 (lower is better)
Translates to: LTTNENATGVHIQTTVFHSNMAT*ASSCHY
Trigger: GTAATGGCAGCTGGAAGCCCATGTGGCCATATTGGA...ATGAAACACAGTGGTTTGAATATGAACACCAGTAGCATTCTCGTTCGTTGTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CCA 90 bp CTTCCAATGGAATTTGGAATTTCCCTTACCTATCCTTGGTATCAGTTTAACCATTCCCAGAGTCCAATATaGCCACATGGGCTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: LPMEFGISLTYPWYQFNHSQSPI*PHGLPA
Trigger: AGCTGGAAGCCCATGTGGCCATATTGGACTCTGGGA...ATGGTTAAACTGATACCAAGGATAGGTAAGGGAAATTCCAAATTCCATTGGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CCA 90 bp CTAACAACGAACGAGAATGCTACTGGTGTTCATATTCAAACCACTGTGTTTCATCAGGTGCAGCATATCTaGGTACAAGGCCAGGAATTG +
Preference number: 4 (lower is better)
Translates to: LTTNENATGVHIQTTVFHQVQHI*VQGQEL
Trigger: CAATTCCTGGCCTTGTACCCAGATATGCTGCACCTG...ATGAAACACAGTGGTTTGAATATGAACACCAGTAGCATTCTCGTTCGTTGTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR TCA 90 bp CAAATAAAACATATGGTATTTGAGGGATGCAAAACCCTCAAATACAAGGACCGAGGGTGGAAGTCTCACTaGCATGGTATTCTGAAGTCC +
Preference number: 4 (lower is better)
Translates to: QIKHMVFEGCKTLKYKDRGWKSH*HGILKS
Trigger: GGACTTCAGAATACCATGTCAGTGAGACTTCCACCC...TCGGTCCTTGTATTTGAGGGTTTTGCATCCCTCAAATACCATATGTTTTATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR TCA 90 bp AAGCATATACCACAGAGAGAGCCTTATATGTACAAAAAGGGCTCATGTAGGATGCTTGATGGCAAGCAATaGTACCATCCCAGTCACTTT +
Preference number: 4 (lower is better)
Translates to: KHIPQREPYMYKKGSCRMLDGKQ*YHPSHF
Trigger: AAAGTGACTGGGATGGTATCATTGCTTGCCATCAAG...CATCCTACATGAGCCCTTTTTGTACATATAAGGCTCTCTCTGTGGTATATGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR TCA 90 bp GGGCTACCTGGGTTTGCAATGGTTGTGAAAGAAAAGTATACTCAGCATTTTCTTAGGAAGCATGACTATTaGAGGGACATAATCTGCAGG +
Preference number: 4 (lower is better)
Translates to: GLPGFAMVVKEKYTQHFLRKHDY*RDIICR
Trigger: CCTGCAGATTATGTCCCTTCAATAGTCATGCTTCCT...AAGAAAATGCTGAGTATACTTTTCTTTCACAACCATTGCAAACCCAGGTAGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR TCA 90 bp AAGCATATACCACAGAGAGAGCCTTATATGTACAAAAAGGGCTCATGTAGGATGTCTACATCTTGGGTTTaGCAAGTACCAGGAAGCATG +
Preference number: 4 (lower is better)
Translates to: KHIPQREPYMYKKGSCRMSTSWV*QVPGSM
Trigger: CATGCTTCCTGGTACTTGTCAAACCCAAGATGTAGA...CATCCTACATGAGCCCTTTTTGTACATATAAGGCTCTCTCTGTGGTATATGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR TCA 90 bp CTAACAACGAACGAGAATGCTACTGGTGTTCATATTCAAACCACTGTGTTTCATAGGGGAACTGTAACTTaGTACAGCCATTCTGGAACC +
Preference number: 4 (lower is better)
Translates to: LTTNENATGVHIQTTVFHRGTVT*YSHSGT
Trigger: GGTTCCAGAATGGCTGTATCAAGTTACAGTTCCCCT...ATGAAACACAGTGGTTTGAATATGAACACCAGTAGCATTCTCGTTCGTTGTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR GCA 90 bp CTTCCAATGGAATTTGGAATTTCCCTTACCTATCCTTGGTATCAGTTTAACCATGTTCTCCAGCTCTTTTaGGGTGGAAGGAAGCTCGTT +
Preference number: 4 (lower is better)
Translates to: LPMEFGISLTYPWYQFNHVLQLF*GGRKLV
Trigger: AACGAGCTTCCTTCCACCGCAAAAGAGCTGGAGAAC...ATGGTTAAACTGATACCAAGGATAGGTAAGGGAAATTCCAAATTCCATTGGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506538.6
ENST00000612402.4
CDS-3UTR GCA 90 bp CTAACAACGAACGAGAATGCTACTGGTGTTCATATTCAAACCACTGTGTTTCATAGGTGTGGAAACTCTTaGCCACGCAGGTTGTTACAT +
Preference number: 4 (lower is better)
Translates to: LTTNENATGVHIQTTVFHRCGNS*PRRLLH
Trigger: ATGTAACAACCTGCGTGGGCAAGAGTTTCCACACCT...ATGAAACACAGTGGTTTGAATATGAACACCAGTAGCATTCTCGTTCGTTGTTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR GCA 90 bp CTAACAACGAACGAGAATGCTACTGGTGTTCATATTCAAACCACTGTGTTTCATCAGCAAAGACTAATCTaGCATCAGCTGCCATACAGC +
Preference number: 4 (lower is better)
Translates to: LTTNENATGVHIQTTVFHQQRLI*HQLPYS
Trigger: GCTGTATGGCAGCTGATGGCAGATTAGTCTTTGCTG...ATGAAACACAGTGGTTTGAATATGAACACCAGTAGCATTCTCGTTCGTTGTTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR GCA 90 bp CTTCCAATGGAATTTGGAATTTCCCTTACCTATCCTTGGTATCAGTTTAACCATACATGGGCTTCCAGCTaGCATTACTGGATGACCATC +
Preference number: 4 (lower is better)
Translates to: LPMEFGISLTYPWYQFNHTWASS*HYWMTI
Trigger: GATGGTCATCCAGTAATGGCAGCTGGAAGCCCATGT...ATGGTTAAACTGATACCAAGGATAGGTAAGGGAAATTCCAAATTCCATTGGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR GCA 90 bp CAAATAAAACATATGGTATTTGAGGGATGCAAAACCCTCAAATACAAGGACCGAGTCCACATGGGAAGTTaGCAGAAAGTCTCCAGTAGG +
Preference number: 4 (lower is better)
Translates to: QIKHMVFEGCKTLKYKDRVHMGS*QKVSSR
Trigger: CCTACTGGAGACTTTCTGGCAACTTCCCATGTGGAC...TCGGTCCTTGTATTTGAGGGTTTTGCATCCCTCAAATACCATATGTTTTATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR GCA 90 bp CTAACAACGAACGAGAATGCTACTGGTGTTCATATTCAAACCACTGTGTTTCATTGCCTGGCCGGGAGGTaGGATTTTATTTCAAGAAAG +
Preference number: 4 (lower is better)
Translates to: LTTNENATGVHIQTTVFHCLAGR*DFISRK
Trigger: CTTTCTTGAAATAAAATCGCACCTCCCGGCCAGGCA...ATGAAACACAGTGGTTTGAATATGAACACCAGTAGCATTCTCGTTCGTTGTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR GCA 90 bp CTTCCAATGGAATTTGGAATTTCCCTTACCTATCCTTGGTATCAGTTTAACCATACATGGGGAAGCAGATaGTCATATCTTGCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: LPMEFGISLTYPWYQFNHTWGSR*SYLAQG
Trigger: CCCCTGAGCAAGATATGAGCATCTGCTTCCCCATGT...ATGGTTAAACTGATACCAAGGATAGGTAAGGGAAATTCCAAATTCCATTGGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR GCA 90 bp AAGCATATACCACAGAGAGAGCCTTATATGTACAAAAAGGGCTCATGTAGGATGATAGGTCCCATGATCTaGAGGGCATTGCTTGGATTT +
Preference number: 4 (lower is better)
Translates to: KHIPQREPYMYKKGSCRMIGPMI*RALLGF
Trigger: AAATCCAAGCAATGCCCTGCAGATCATGGGACCTAT...CATCCTACATGAGCCCTTTTTGTACATATAAGGCTCTCTCTGTGGTATATGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CCA 90 bp AAGCATATACCACAGAGAGAGCCTTATATGTACAAAAAGGGCTCATGTAGGATGCACTCACAGACCCTCTaGGGAGTAGAACTAATTACT +
Preference number: 4 (lower is better)
Translates to: KHIPQREPYMYKKGSCRMHSQTL*GVELIT
Trigger: AGTAATTAGTTCTACTCCCCAGAGGGTCTGTGAGTG...CATCCTACATGAGCCCTTTTTGTACATATAAGGCTCTCTCTGTGGTATATGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506538.6
CDS-3UTR CCA 90 bp CTTCCAATGGAATTTGGAATTTCCCTTACCTATCCTTGGTATCAGTTTAACCATGAACCGCACCACGTGTaGAATGTCGTTGCTGAAAAG +
Preference number: 4 (lower is better)
Translates to: LPMEFGISLTYPWYQFNHEPHHV*NVVAEK
Trigger: CTTTTCAGCAACGACATTCCACACGTGGTGCGGTTC...ATGGTTAAACTGATACCAAGGATAGGTAAGGGAAATTCCAAATTCCATTGGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CCA 90 bp CAAATAAAACATATGGTATTTGAGGGATGCAAAACCCTCAAATACAAGGACCGAGAACCGCACCACGTGTaGAATGTCGTTGCTGAAAAG +
Preference number: 4 (lower is better)
Translates to: QIKHMVFEGCKTLKYKDREPHHV*NVVAEK
Trigger: CTTTTCAGCAACGACATTCCACACGTGGTGCGGTTC...TCGGTCCTTGTATTTGAGGGTTTTGCATCCCTCAAATACCATATGTTTTATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CCA 90 bp TATATGTACAAAAAGGGCTCATGTAGGATGATGTTCCTTTCAGCATTGTTTGTAAACAACATCCACGGCTaGTGCCTGCTGAAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: YMYKKGSCRMMFLSALFVNNIHG*CLLKSC
Trigger: ACAGCTCTTCAGCAGGCACCAGCCGTGGATGTTGTT...TACAAACAATGCTGAAAGGAACATCATCCTACATGAGCCCTTTTTGTACATATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CCA 90 bp CTAACAACGAACGAGAATGCTACTGGTGTTCATATTCAAACCACTGTGTTTCATTCCAGCTGCCATTACTaGATGACCATCTGTGCGAAA +
Preference number: 4 (lower is better)
Translates to: LTTNENATGVHIQTTVFHSSCHY*MTICAK
Trigger: TTTCGCACAGATGGTCATCCAGTAATGGCAGCTGGA...ATGAAACACAGTGGTTTGAATATGAACACCAGTAGCATTCTCGTTCGTTGTTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CCA 90 bp CAAATAAAACATATGGTATTTGAGGGATGCAAAACCCTCAAATACAAGGACCGATCCAATATGGCCACATaGGCTTCCAGCTGCCATTAC +
Preference number: 4 (lower is better)
Translates to: QIKHMVFEGCKTLKYKDRSNMAT*ASSCHY
Trigger: GTAATGGCAGCTGGAAGCCCATGTGGCCATATTGGA...TCGGTCCTTGTATTTGAGGGTTTTGCATCCCTCAAATACCATATGTTTTATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CCA 90 bp CAAATAAAACATATGGTATTTGAGGGATGCAAAACCCTCAAATACAAGGACCGACCAAGGTGGTCCACATaGGAAGTTGCCAGAAAGTCT +
Preference number: 4 (lower is better)
Translates to: QIKHMVFEGCKTLKYKDRPRWST*EVARKS
Trigger: AGACTTTCTGGCAACTTCCCATGTGGACCACCTTGG...TCGGTCCTTGTATTTGAGGGTTTTGCATCCCTCAAATACCATATGTTTTATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CCA 90 bp AAGCATATACCACAGAGAGAGCCTTATATGTACAAAAAGGGCTCATGTAGGATGAATGCAAGGTATGCCTaGGCTAACTCAAAATCACGC +
Preference number: 4 (lower is better)
Translates to: KHIPQREPYMYKKGSCRMNARYA*ANSKSR
Trigger: GCGTGATTTTGAGTTAGCCCAGGCATACCTTGCATT...CATCCTACATGAGCCCTTTTTGTACATATAAGGCTCTCTCTGTGGTATATGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CCA 90 bp TATATGTACAAAAAGGGCTCATGTAGGATGATGTTCCTTTCAGCATTGTTTGTAGCAATCCTCCCGCTTTaGCCTCTGAAAGTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: YMYKKGSCRMMFLSALFVAILPL*PLKVLE
Trigger: TTCCAGCACTTTCAGAGGCCAAAGCGGGAGGATTGC...TACAAACAATGCTGAAAGGAACATCATCCTACATGAGCCCTTTTTGTACATATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CCA 90 bp CTTCCAATGGAATTTGGAATTTCCCTTACCTATCCTTGGTATCAGTTTAACCATGCATTGCTTGGATTTTaGTATCCACAGGGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: LPMEFGISLTYPWYQFNHALLGF*YPQGSW
Trigger: CCAGGACCCCTGTGGATACCAAAATCCAAGCAATGC...ATGGTTAAACTGATACCAAGGATAGGTAAGGGAAATTCCAAATTCCATTGGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR TCA 90 bp GGGCTACCTGGGTTTGCAATGGTTGTGAAAGAAAAGTATACTCAGCATTTTCTTATGGGTCCCCAGTCTTaGCGAAACTTCATTAATGTT +
Preference number: 4 (lower is better)
Translates to: GLPGFAMVVKEKYTQHFLMGPQS*RNFINV
Trigger: AACATTAATGAAGTTTCGTCAAGACTGGGGACCCAT...AAGAAAATGCTGAGTATACTTTTCTTTCACAACCATTGCAAACCCAGGTAGCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR TCA 90 bp CAAATAAAACATATGGTATTTGAGGGATGCAAAACCCTCAAATACAAGGACCGAGCTGCCATTACTGGATaGCCATCTGTGCGAAATGAA +
Preference number: 4 (lower is better)
Translates to: QIKHMVFEGCKTLKYKDRAAITG*PSVRNE
Trigger: TTCATTTCGCACAGATGGTCATCCAGTAATGGCAGC...TCGGTCCTTGTATTTGAGGGTTTTGCATCCCTCAAATACCATATGTTTTATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR TCA 90 bp CAAATAAAACATATGGTATTTGAGGGATGCAAAACCCTCAAATACAAGGACCGATGTCAGCGCCATTTGTaGCAAGAAGTGGCTCTCTAT +
Preference number: 4 (lower is better)
Translates to: QIKHMVFEGCKTLKYKDRCQRHL*QEVALY
Trigger: ATAGAGAGCCACTTCTTGTCACAAATGGCGCTGACA...TCGGTCCTTGTATTTGAGGGTTTTGCATCCCTCAAATACCATATGTTTTATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR TCA 90 bp CTAACAACGAACGAGAATGCTACTGGTGTTCATATTCAAACCACTGTGTTTCATCACTATGACCCATTCTaGATCTCAAAAGTCGGCCTT +
Preference number: 4 (lower is better)
Translates to: LTTNENATGVHIQTTVFHHYDPF*ISKVGL
Trigger: AAGGCCGACTTTTGAGATTCAGAATGGGTCATAGTG...ATGAAACACAGTGGTTTGAATATGAACACCAGTAGCATTCTCGTTCGTTGTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR TCA 90 bp GGGCTACCTGGGTTTGCAATGGTTGTGAAAGAAAAGTATACTCAGCATTTTCTTATGTACCGTGGAAAATaGCTGAAGAGTTCCATCTTG +
Preference number: 4 (lower is better)
Translates to: GLPGFAMVVKEKYTQHFLMYRGK*LKSSIL
Trigger: CAAGATGGAACTCTTCAGTCATTTTCCACGGTACAT...AAGAAAATGCTGAGTATACTTTTCTTTCACAACCATTGCAAACCCAGGTAGCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR TCA 90 bp AAGCATATACCACAGAGAGAGCCTTATATGTACAAAAAGGGCTCATGTAGGATGGTCCCAAGCTCTTATTaGATTTTTCATGTACCGTGG +
Preference number: 4 (lower is better)
Translates to: KHIPQREPYMYKKGSCRMVPSSY*IFHVPW
Trigger: CCACGGTACATGAAAAATTCAATAAGAGCTTGGGAC...CATCCTACATGAGCCCTTTTTGTACATATAAGGCTCTCTCTGTGGTATATGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR TCA 90 bp GGGCTACCTGGGTTTGCAATGGTTGTGAAAGAAAAGTATACTCAGCATTTTCTTGTCCCAAGCTCTTATTaGATTTTTCATGTACCGTGG +
Preference number: 4 (lower is better)
Translates to: GLPGFAMVVKEKYTQHFLVPSSY*IFHVPW
Trigger: CCACGGTACATGAAAAATTCAATAAGAGCTTGGGAC...AAGAAAATGCTGAGTATACTTTTCTTTCACAACCATTGCAAACCCAGGTAGCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR TCA 90 bp TATATGTACAAAAAGGGCTCATGTAGGATGATGTTCCTTTCAGCATTGTTTGTACTGCTGCAAACTTTGTaGTGGGTGGAAGTCTCACTG +
Preference number: 4 (lower is better)
Translates to: YMYKKGSCRMMFLSALFVLLQTL*WVEVSL
Trigger: CAGTGAGACTTCCACCCATCACAAAGTTTGCAGCAG...TACAAACAATGCTGAAAGGAACATCATCCTACATGAGCCCTTTTTGTACATATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR TCA 90 bp AAGCATATACCACAGAGAGAGCCTTATATGTACAAAAAGGGCTCATGTAGGATGCAAGATAGCTTACCTTaGTGGCAAGCAATGATACCA +
Preference number: 4 (lower is better)
Translates to: KHIPQREPYMYKKGSCRMQDSLP*WQAMIP
Trigger: TGGTATCATTGCTTGCCATCAAGGTAAGCTATCTTG...CATCCTACATGAGCCCTTTTTGTACATATAAGGCTCTCTCTGTGGTATATGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR TCA 90 bp GGGCTACCTGGGTTTGCAATGGTTGTGAAAGAAAAGTATACTCAGCATTTTCTTTCAACTCTTTTGGCTTaGGAAAGTAAGCGCCTATTG +
Preference number: 4 (lower is better)
Translates to: GLPGFAMVVKEKYTQHFLSTLLA*ESKRLL
Trigger: CAATAGGCGCTTACTTTCTCAAGCCAAAAGAGTTGA...AAGAAAATGCTGAGTATACTTTTCTTTCACAACCATTGCAAACCCAGGTAGCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR TCA 90 bp CTAACAACGAACGAGAATGCTACTGGTGTTCATATTCAAACCACTGTGTTTCATTCTACATCTTGGGTTTaGCAAGTACCAGGAAGCATG +
Preference number: 4 (lower is better)
Translates to: LTTNENATGVHIQTTVFHSTSWV*QVPGSM
Trigger: CATGCTTCCTGGTACTTGTCAAACCCAAGATGTAGA...ATGAAACACAGTGGTTTGAATATGAACACCAGTAGCATTCTCGTTCGTTGTTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR TCA 90 bp GGGCTACCTGGGTTTGCAATGGTTGTGAAAGAAAAGTATACTCAGCATTTTCTTAATGAAAAATGGTGCTaGTTTGGGTACTTTGGGTGG +
Preference number: 4 (lower is better)
Translates to: GLPGFAMVVKEKYTQHFLNEKWC*FGYFGW
Trigger: CCACCCAAAGTACCCAAATCAGCACCATTTTTCATT...AAGAAAATGCTGAGTATACTTTTCTTTCACAACCATTGCAAACCCAGGTAGCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR TCA 90 bp AAGCATATACCACAGAGAGAGCCTTATATGTACAAAAAGGGCTCATGTAGGATGGCTTTGATTGAAGAGTaGTTGCAAATGGGTCCAGTT +
Preference number: 4 (lower is better)
Translates to: KHIPQREPYMYKKGSCRMALIEE*LQMGPV
Trigger: AACTGGACCCATTTGCAATCACTCTTCAATCAAAGC...CATCCTACATGAGCCCTTTTTGTACATATAAGGCTCTCTCTGTGGTATATGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR TCA 90 bp AAGCATATACCACAGAGAGAGCCTTATATGTACAAAAAGGGCTCATGTAGGATGAAAGTGGAGATATACTaGCTAGTCAGTAGTGCTAGC +
Preference number: 4 (lower is better)
Translates to: KHIPQREPYMYKKGSCRMKVEIY*LVSSAS
Trigger: GCTAGCACTACTGACTAGTCAGTATATCTCCACTTT...CATCCTACATGAGCCCTTTTTGTACATATAAGGCTCTCTCTGTGGTATATGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR TCA 90 bp CTTCCAATGGAATTTGGAATTTCCCTTACCTATCCTTGGTATCAGTTTAACCATGGCCTCCCACATTTCTaGTCCATGAACAACTTCCTT +
Preference number: 4 (lower is better)
Translates to: LPMEFGISLTYPWYQFNHGLPHF*SMNNFL
Trigger: AAGGAAGTTGTTCATGGATCAGAAATGTGGGAGGCC...ATGGTTAAACTGATACCAAGGATAGGTAAGGGAAATTCCAAATTCCATTGGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR TCA 90 bp CTAACAACGAACGAGAATGCTACTGGTGTTCATATTCAAACCACTGTGTTTCATCTGGTAAATGCCTTTTaGGGACTGCTTCTTTTGGAG +
Preference number: 4 (lower is better)
Translates to: LTTNENATGVHIQTTVFHLVNAF*GLLLLE
Trigger: CTCCAAAAGAAGCAGTCCTCAAAAGGCATTTACCAG...ATGAAACACAGTGGTTTGAATATGAACACCAGTAGCATTCTCGTTCGTTGTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR GCA 90 bp CAAATAAAACATATGGTATTTGAGGGATGCAAAACCCTCAAATACAAGGACCGACAGCAAAGACTAATCTaGCATCAGCTGCCATACAGC +
Preference number: 4 (lower is better)
Translates to: QIKHMVFEGCKTLKYKDRQQRLI*HQLPYS
Trigger: GCTGTATGGCAGCTGATGGCAGATTAGTCTTTGCTG...TCGGTCCTTGTATTTGAGGGTTTTGCATCCCTCAAATACCATATGTTTTATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR GCA 90 bp CTAACAACGAACGAGAATGCTACTGGTGTTCATATTCAAACCACTGTGTTTCATTGGTCTCCAAAGGGTTaGAAGAAATGGATTTCTGCC +
Preference number: 4 (lower is better)
Translates to: LTTNENATGVHIQTTVFHWSPKG*KKWISA
Trigger: GGCAGAAATCCATTTCTTGCAACCCTTTGGAGACCA...ATGAAACACAGTGGTTTGAATATGAACACCAGTAGCATTCTCGTTCGTTGTTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR GCA 90 bp TATATGTACAAAAAGGGCTCATGTAGGATGATGTTCCTTTCAGCATTGTTTGTAACATGGGCTTCCAGCTaGCATTACTGGATGACCATC +
Preference number: 4 (lower is better)
Translates to: YMYKKGSCRMMFLSALFVTWASS*HYWMTI
Trigger: GATGGTCATCCAGTAATGGCAGCTGGAAGCCCATGT...TACAAACAATGCTGAAAGGAACATCATCCTACATGAGCCCTTTTTGTACATATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR GCA 90 bp CTAACAACGAACGAGAATGCTACTGGTGTTCATATTCAAACCACTGTGTTTCATTGTCAGTCCGGCAATTaGTGTAGAGTGTGCATTTCT +
Preference number: 4 (lower is better)
Translates to: LTTNENATGVHIQTTVFHCQSGN*CRVCIS
Trigger: AGAAATGCACACTCTACAGCAATTGCCGGACTGACA...ATGAAACACAGTGGTTTGAATATGAACACCAGTAGCATTCTCGTTCGTTGTTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR GCA 90 bp GGGCTACCTGGGTTTGCAATGGTTGTGAAAGAAAAGTATACTCAGCATTTTCTTTGTGAGCTTGATCCTTaGCAAAACTTCCTCGATGTA +
Preference number: 4 (lower is better)
Translates to: GLPGFAMVVKEKYTQHFLCELDP*QNFLDV
Trigger: TACATCGAGGAAGTTTTGGCAAGGATCAAGCTCACA...AAGAAAATGCTGAGTATACTTTTCTTTCACAACCATTGCAAACCCAGGTAGCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR GCA 90 bp AAGCATATACCACAGAGAGAGCCTTATATGTACAAAAAGGGCTCATGTAGGATGGAAAGAGTCACCAATTaGTCATTCAACTGTTCTGGC +
Preference number: 4 (lower is better)
Translates to: KHIPQREPYMYKKGSCRMERVTN*SFNCSG
Trigger: GCCAGAACAGTTGAATGAGCAATTGGTGACTCTTTC...CATCCTACATGAGCCCTTTTTGTACATATAAGGCTCTCTCTGTGGTATATGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR GCA 90 bp CTTCCAATGGAATTTGGAATTTCCCTTACCTATCCTTGGTATCAGTTTAACCATTGCCTGGCCGGGAGGTaGGATTTTATTTCAAGAAAG +
Preference number: 4 (lower is better)
Translates to: LPMEFGISLTYPWYQFNHCLAGR*DFISRK
Trigger: CTTTCTTGAAATAAAATCGCACCTCCCGGCCAGGCA...ATGGTTAAACTGATACCAAGGATAGGTAAGGGAAATTCCAAATTCCATTGGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR GCA 90 bp CTTCCAATGGAATTTGGAATTTCCCTTACCTATCCTTGGTATCAGTTTAACCATTCTTGCTTGCTATGTTaGCCAGGCTGGGCTCAAATT +
Preference number: 4 (lower is better)
Translates to: LPMEFGISLTYPWYQFNHSCLLC*PGWAQI
Trigger: AATTTGAGCCCAGCCTGGGCAACATAGCAAGCAAGA...ATGGTTAAACTGATACCAAGGATAGGTAAGGGAAATTCCAAATTCCATTGGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR GCA 90 bp CTAACAACGAACGAGAATGCTACTGGTGTTCATATTCAAACCACTGTGTTTCATATAGGTCCCATGATCTaGAGGGCATTGCTTGGATTT +
Preference number: 4 (lower is better)
Translates to: LTTNENATGVHIQTTVFHIGPMI*RALLGF
Trigger: AAATCCAAGCAATGCCCTGCAGATCATGGGACCTAT...ATGAAACACAGTGGTTTGAATATGAACACCAGTAGCATTCTCGTTCGTTGTTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CCA 90 bp GGGCTACCTGGGTTTGCAATGGTTGTGAAAGAAAAGTATACTCAGCATTTTCTTAGAACTAATTACTTGTaGGGAGGGAACTGCTCACTT +
Preference number: 4 (lower is better)
Translates to: GLPGFAMVVKEKYTQHFLRTNYL*GGNCSL
Trigger: AAGTGAGCAGTTCCCTCCCCACAAGTAATTAGTTCT...AAGAAAATGCTGAGTATACTTTTCTTTCACAACCATTGCAAACCCAGGTAGCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506538.6
CDS-3UTR CCA 90 bp AAGCATATACCACAGAGAGAGCCTTATATGTACAAAAAGGGCTCATGTAGGATGTCGACGCCTTGGAGATaGAAACGATTTAAACATGTG +
Preference number: 4 (lower is better)
Translates to: KHIPQREPYMYKKGSCRMSTPWR*KRFKHV
Trigger: CACATGTTTAAATCGTTTCCATCTCCAAGGCGTCGA...CATCCTACATGAGCCCTTTTTGTACATATAAGGCTCTCTCTGTGGTATATGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506538.6
CDS-3UTR CCA 90 bp CAAATAAAACATATGGTATTTGAGGGATGCAAAACCCTCAAATACAAGGACCGATCCAGCTGCCATTACTaGATGACCATCTGTGCGAAA +
Preference number: 4 (lower is better)
Translates to: QIKHMVFEGCKTLKYKDRSSCHY*MTICAK
Trigger: TTTCGCACAGATGGTCATCCAGTAATGGCAGCTGGA...TCGGTCCTTGTATTTGAGGGTTTTGCATCCCTCAAATACCATATGTTTTATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CCA 90 bp TATATGTACAAAAAGGGCTCATGTAGGATGATGTTCCTTTCAGCATTGTTTGTATCCAATATGGCCACATaGGCTTCCAGCTGCCATTAC +
Preference number: 4 (lower is better)
Translates to: YMYKKGSCRMMFLSALFVSNMAT*ASSCHY
Trigger: GTAATGGCAGCTGGAAGCCCATGTGGCCATATTGGA...TACAAACAATGCTGAAAGGAACATCATCCTACATGAGCCCTTTTTGTACATATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CCA 90 bp GGGCTACCTGGGTTTGCAATGGTTGTGAAAGAAAAGTATACTCAGCATTTTCTTGTTGTAACTGTCAACTaGTTTAATCCATCCACTGCG +
Preference number: 4 (lower is better)
Translates to: GLPGFAMVVKEKYTQHFLVVTVN*FNPSTA
Trigger: CGCAGTGGATGGATTAAACCAGTTGACAGTTACAAC...AAGAAAATGCTGAGTATACTTTTCTTTCACAACCATTGCAAACCCAGGTAGCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CCA 90 bp TATATGTACAAAAAGGGCTCATGTAGGATGATGTTCCTTTCAGCATTGTTTGTACCAAGGTGGTCCACATaGGAAGTTGCCAGAAAGTCT +
Preference number: 4 (lower is better)
Translates to: YMYKKGSCRMMFLSALFVPRWST*EVARKS
Trigger: AGACTTTCTGGCAACTTCCCATGTGGACCACCTTGG...TACAAACAATGCTGAAAGGAACATCATCCTACATGAGCCCTTTTTGTACATATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CCA 90 bp TATATGTACAAAAAGGGCTCATGTAGGATGATGTTCCTTTCAGCATTGTTTGTACAGGTGCAGCATATCTaGGTACAAGGCCAGGAATTG +
Preference number: 4 (lower is better)
Translates to: YMYKKGSCRMMFLSALFVQVQHI*VQGQEL
Trigger: CAATTCCTGGCCTTGTACCCAGATATGCTGCACCTG...TACAAACAATGCTGAAAGGAACATCATCCTACATGAGCCCTTTTTGTACATATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CCA 90 bp GGGCTACCTGGGTTTGCAATGGTTGTGAAAGAAAAGTATACTCAGCATTTTCTTAAGAGTGATTGCAAATaGGTCCAGTTTTCTTCCACC +
Preference number: 4 (lower is better)
Translates to: GLPGFAMVVKEKYTQHFLKSDCK*VQFSST
Trigger: GGTGGAAGAAAACTGGACCCATTTGCAATCACTCTT...AAGAAAATGCTGAGTATACTTTTCTTTCACAACCATTGCAAACCCAGGTAGCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CCA 90 bp TATATGTACAAAAAGGGCTCATGTAGGATGATGTTCCTTTCAGCATTGTTTGTAGCATTGCTTGGATTTTaGTATCCACAGGGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: YMYKKGSCRMMFLSALFVALLGF*YPQGSW
Trigger: CCAGGACCCCTGTGGATACCAAAATCCAAGCAATGC...TACAAACAATGCTGAAAGGAACATCATCCTACATGAGCCCTTTTTGTACATATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR TCA 90 bp TATATGTACAAAAAGGGCTCATGTAGGATGATGTTCCTTTCAGCATTGTTTGTATGTCAGCGCCATTTGTaGCAAGAAGTGGCTCTCTAT +
Preference number: 4 (lower is better)
Translates to: YMYKKGSCRMMFLSALFVCQRHL*QEVALY
Trigger: ATAGAGAGCCACTTCTTGTCACAAATGGCGCTGACA...TACAAACAATGCTGAAAGGAACATCATCCTACATGAGCCCTTTTTGTACATATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR TCA 90 bp CAAATAAAACATATGGTATTTGAGGGATGCAAAACCCTCAAATACAAGGACCGACACTATGACCCATTCTaGATCTCAAAAGTCGGCCTT +
Preference number: 4 (lower is better)
Translates to: QIKHMVFEGCKTLKYKDRHYDPF*ISKVGL
Trigger: AAGGCCGACTTTTGAGATTCAGAATGGGTCATAGTG...TCGGTCCTTGTATTTGAGGGTTTTGCATCCCTCAAATACCATATGTTTTATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR TCA 90 bp CTAACAACGAACGAGAATGCTACTGGTGTTCATATTCAAACCACTGTGTTTCATGTCCCAAGCTCTTATTaGATTTTTCATGTACCGTGG +
Preference number: 4 (lower is better)
Translates to: LTTNENATGVHIQTTVFHVPSSY*IFHVPW
Trigger: CCACGGTACATGAAAAATTCAATAAGAGCTTGGGAC...ATGAAACACAGTGGTTTGAATATGAACACCAGTAGCATTCTCGTTCGTTGTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR TCA 90 bp CAAATAAAACATATGGTATTTGAGGGATGCAAAACCCTCAAATACAAGGACCGACTTGATGGCAAGCAATaGTACCATCCCAGTCACTTT +
Preference number: 4 (lower is better)
Translates to: QIKHMVFEGCKTLKYKDRLDGKQ*YHPSHF
Trigger: AAAGTGACTGGGATGGTATCATTGCTTGCCATCAAG...TCGGTCCTTGTATTTGAGGGTTTTGCATCCCTCAAATACCATATGTTTTATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR TCA 90 bp CTTCCAATGGAATTTGGAATTTCCCTTACCTATCCTTGGTATCAGTTTAACCATCTTGATGGCAAGCAATaGTACCATCCCAGTCACTTT +
Preference number: 4 (lower is better)
Translates to: LPMEFGISLTYPWYQFNHLDGKQ*YHPSHF
Trigger: AAAGTGACTGGGATGGTATCATTGCTTGCCATCAAG...ATGGTTAAACTGATACCAAGGATAGGTAAGGGAAATTCCAAATTCCATTGGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR TCA 90 bp CTAACAACGAACGAGAATGCTACTGGTGTTCATATTCAAACCACTGTGTTTCATCATGATATTTGGAGATaGACTGAGGCTCACAGAATG +
Preference number: 4 (lower is better)
Translates to: LTTNENATGVHIQTTVFHHDIWR*TEAHRM
Trigger: CATTCTGTGAGCCTCAGTTCATCTCCAAATATCATG...ATGAAACACAGTGGTTTGAATATGAACACCAGTAGCATTCTCGTTCGTTGTTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR TCA 90 bp CTTCCAATGGAATTTGGAATTTCCCTTACCTATCCTTGGTATCAGTTTAACCATAGGAAGCATGACTATTaGAGGGACATAATCTGCAGG +
Preference number: 4 (lower is better)
Translates to: LPMEFGISLTYPWYQFNHRKHDY*RDIICR
Trigger: CCTGCAGATTATGTCCCTTCAATAGTCATGCTTCCT...ATGGTTAAACTGATACCAAGGATAGGTAAGGGAAATTCCAAATTCCATTGGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR TCA 90 bp CTAACAACGAACGAGAATGCTACTGGTGTTCATATTCAAACCACTGTGTTTCATAATGAAAAATGGTGCTaGTTTGGGTACTTTGGGTGG +
Preference number: 4 (lower is better)
Translates to: LTTNENATGVHIQTTVFHNEKWC*FGYFGW
Trigger: CCACCCAAAGTACCCAAATCAGCACCATTTTTCATT...ATGAAACACAGTGGTTTGAATATGAACACCAGTAGCATTCTCGTTCGTTGTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR TCA 90 bp CTTCCAATGGAATTTGGAATTTCCCTTACCTATCCTTGGTATCAGTTTAACCATCTGGTAAATGCCTTTTaGGGACTGCTTCTTTTGGAG +
Preference number: 4 (lower is better)
Translates to: LPMEFGISLTYPWYQFNHLVNAF*GLLLLE
Trigger: CTCCAAAAGAAGCAGTCCTCAAAAGGCATTTACCAG...ATGGTTAAACTGATACCAAGGATAGGTAAGGGAAATTCCAAATTCCATTGGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR TCA 90 bp AAGCATATACCACAGAGAGAGCCTTATATGTACAAAAAGGGCTCATGTAGGATGGGTTATACTCTGGCCTaGAATTCAAATCCTAAGCAT +
Preference number: 4 (lower is better)
Translates to: KHIPQREPYMYKKGSCRMGYTLA*NSNPKH
Trigger: ATGCTTAGGATTTGAATTTCAGGCCAGAGTATAACC...CATCCTACATGAGCCCTTTTTGTACATATAAGGCTCTCTCTGTGGTATATGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR TCA 90 bp AAGCATATACCACAGAGAGAGCCTTATATGTACAAAAAGGGCTCATGTAGGATGGGCTTTACCCAAATCTaGGAACATACCAAAGTAATG +
Preference number: 4 (lower is better)
Translates to: KHIPQREPYMYKKGSCRMGFTQI*EHTKVM
Trigger: CATTACTTTGGTATGTTCTCAGATTTGGGTAAAGCC...CATCCTACATGAGCCCTTTTTGTACATATAAGGCTCTCTCTGTGGTATATGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR GCA 90 bp TATATGTACAAAAAGGGCTCATGTAGGATGATGTTCCTTTCAGCATTGTTTGTAAGGTGTGGAAACTCTTaGCCACGCAGGTTGTTACAT +
Preference number: 4 (lower is better)
Translates to: YMYKKGSCRMMFLSALFVRCGNS*PRRLLH
Trigger: ATGTAACAACCTGCGTGGGCAAGAGTTTCCACACCT...TACAAACAATGCTGAAAGGAACATCATCCTACATGAGCCCTTTTTGTACATATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR GCA 90 bp CTAACAACGAACGAGAATGCTACTGGTGTTCATATTCAAACCACTGTGTTTCATTTTACATTCCACAACTaGAGGCTTCCTTGTTCACTG +
Preference number: 4 (lower is better)
Translates to: LTTNENATGVHIQTTVFHFTFHN*RLPCSL
Trigger: CAGTGAACAAGGAAGCCTGCAGTTGTGGAATGTAAA...ATGAAACACAGTGGTTTGAATATGAACACCAGTAGCATTCTCGTTCGTTGTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR GCA 90 bp CAAATAAAACATATGGTATTTGAGGGATGCAAAACCCTCAAATACAAGGACCGATGTCAGTCCGGCAATTaGTGTAGAGTGTGCATTTCT +
Preference number: 4 (lower is better)
Translates to: QIKHMVFEGCKTLKYKDRCQSGN*CRVCIS
Trigger: AGAAATGCACACTCTACAGCAATTGCCGGACTGACA...TCGGTCCTTGTATTTGAGGGTTTTGCATCCCTCAAATACCATATGTTTTATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR GCA 90 bp CTTCCAATGGAATTTGGAATTTCCCTTACCTATCCTTGGTATCAGTTTAACCATTGTCAGTCCGGCAATTaGTGTAGAGTGTGCATTTCT +
Preference number: 4 (lower is better)
Translates to: LPMEFGISLTYPWYQFNHCQSGN*CRVCIS
Trigger: AGAAATGCACACTCTACAGCAATTGCCGGACTGACA...ATGGTTAAACTGATACCAAGGATAGGTAAGGGAAATTCCAAATTCCATTGGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR GCA 90 bp CTAACAACGAACGAGAATGCTACTGGTGTTCATATTCAAACCACTGTGTTTCATGAAAGAGTCACCAATTaGTCATTCAACTGTTCTGGC +
Preference number: 4 (lower is better)
Translates to: LTTNENATGVHIQTTVFHERVTN*SFNCSG
Trigger: GCCAGAACAGTTGAATGAGCAATTGGTGACTCTTTC...ATGAAACACAGTGGTTTGAATATGAACACCAGTAGCATTCTCGTTCGTTGTTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR GCA 90 bp TATATGTACAAAAAGGGCTCATGTAGGATGATGTTCCTTTCAGCATTGTTTGTATCTTGCTTGCTATGTTaGCCAGGCTGGGCTCAAATT +
Preference number: 4 (lower is better)
Translates to: YMYKKGSCRMMFLSALFVSCLLC*PGWAQI
Trigger: AATTTGAGCCCAGCCTGGGCAACATAGCAAGCAAGA...TACAAACAATGCTGAAAGGAACATCATCCTACATGAGCCCTTTTTGTACATATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR GCA 90 bp GGGCTACCTGGGTTTGCAATGGTTGTGAAAGAAAAGTATACTCAGCATTTTCTTAAACTTCAAGAGATGTaGTCACCAGCAGTTAACCAA +
Preference number: 4 (lower is better)
Translates to: GLPGFAMVVKEKYTQHFLKLQEM*SPAVNQ
Trigger: TTGGTTAACTGCTGGTGAGCACATCTCTTGAAGTTT...AAGAAAATGCTGAGTATACTTTTCTTTCACAACCATTGCAAACCCAGGTAGCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CCA 90 bp CTAACAACGAACGAGAATGCTACTGGTGTTCATATTCAAACCACTGTGTTTCATGTTGTAACTGTCAACTaGTTTAATCCATCCACTGCG +
Preference number: 4 (lower is better)
Translates to: LTTNENATGVHIQTTVFHVVTVN*FNPSTA
Trigger: CGCAGTGGATGGATTAAACCAGTTGACAGTTACAAC...ATGAAACACAGTGGTTTGAATATGAACACCAGTAGCATTCTCGTTCGTTGTTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CCA 90 bp GGGCTACCTGGGTTTGCAATGGTTGTGAAAGAAAAGTATACTCAGCATTTTCTTCTGATTTGGGTACTTTaGGTGGTTCCTTTGGTTTAT +
Preference number: 4 (lower is better)
Translates to: GLPGFAMVVKEKYTQHFLLIWVL*VVPLVY
Trigger: ATAAACCAAAGGAACCACCCAAAGTACCCAAATCAG...AAGAAAATGCTGAGTATACTTTTCTTTCACAACCATTGCAAACCCAGGTAGCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CCA 90 bp CTAACAACGAACGAGAATGCTACTGGTGTTCATATTCAAACCACTGTGTTTCATAAAATGGTGCTGATTTaGGTACTTTGGGTGGTTCCT +
Preference number: 4 (lower is better)
Translates to: LTTNENATGVHIQTTVFHKMVLI*VLWVVP
Trigger: AGGAACCACCCAAAGTACCCAAATCAGCACCATTTT...ATGAAACACAGTGGTTTGAATATGAACACCAGTAGCATTCTCGTTCGTTGTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CCA 90 bp AAGCATATACCACAGAGAGAGCCTTATATGTACAAAAAGGGCTCATGTAGGATGTTGATACAGCCATTCTaGAACCCAAATGGAAGTATC +
Preference number: 4 (lower is better)
Translates to: KHIPQREPYMYKKGSCRMLIQPF*NPNGSI
Trigger: GATACTTCCATTTGGGTTCCAGAATGGCTGTATCAA...CATCCTACATGAGCCCTTTTTGTACATATAAGGCTCTCTCTGTGGTATATGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CCA 90 bp GGGCTACCTGGGTTTGCAATGGTTGTGAAAGAAAAGTATACTCAGCATTTTCTTTTGATACAGCCATTCTaGAACCCAAATGGAAGTATC +
Preference number: 4 (lower is better)
Translates to: GLPGFAMVVKEKYTQHFLLIQPF*NPNGSI
Trigger: GATACTTCCATTTGGGTTCCAGAATGGCTGTATCAA...AAGAAAATGCTGAGTATACTTTTCTTTCACAACCATTGCAAACCCAGGTAGCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR TCA 90 bp CTAACAACGAACGAGAATGCTACTGGTGTTCATATTCAAACCACTGTGTTTCATTGGATTTCTGCCTTATaGCCCTTAAAGGTATGTACT +
Preference number: 4 (lower is better)
Translates to: LTTNENATGVHIQTTVFHWISAL*PLKVCT
Trigger: AGTACATACCTTTAAGGGTCATAAGGCAGAAATCCA...ATGAAACACAGTGGTTTGAATATGAACACCAGTAGCATTCTCGTTCGTTGTTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR TCA 90 bp GGGCTACCTGGGTTTGCAATGGTTGTGAAAGAAAAGTATACTCAGCATTTTCTTAATGATAACTTGACCTaGCATAAGACCAATAGCAAC +
Preference number: 4 (lower is better)
Translates to: GLPGFAMVVKEKYTQHFLNDNLT*HKTNSN
Trigger: GTTGCTATTGGTCTTATGTCAGGTCAAGTTATCATT...AAGAAAATGCTGAGTATACTTTTCTTTCACAACCATTGCAAACCCAGGTAGCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR TCA 90 bp CTTCCAATGGAATTTGGAATTTCCCTTACCTATCCTTGGTATCAGTTTAACCATATGGGTCCCCAGTCTTaGCGAAACTTCATTAATGTT +
Preference number: 4 (lower is better)
Translates to: LPMEFGISLTYPWYQFNHMGPQS*RNFINV
Trigger: AACATTAATGAAGTTTCGTCAAGACTGGGGACCCAT...ATGGTTAAACTGATACCAAGGATAGGTAAGGGAAATTCCAAATTCCATTGGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR TCA 90 bp CTTCCAATGGAATTTGGAATTTCCCTTACCTATCCTTGGTATCAGTTTAACCATGTAAGAGGAGCACTATaGCCCATTCTGAATCTCAAA +
Preference number: 4 (lower is better)
Translates to: LPMEFGISLTYPWYQFNHVRGAL*PILNLK
Trigger: TTTGAGATTCAGAATGGGTCATAGTGCTCCTCTTAC...ATGGTTAAACTGATACCAAGGATAGGTAAGGGAAATTCCAAATTCCATTGGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR TCA 90 bp CAAATAAAACATATGGTATTTGAGGGATGCAAAACCCTCAAATACAAGGACCGAATGTACCGTGGAAAATaGCTGAAGAGTTCCATCTTG +
Preference number: 4 (lower is better)
Translates to: QIKHMVFEGCKTLKYKDRMYRGK*LKSSIL
Trigger: CAAGATGGAACTCTTCAGTCATTTTCCACGGTACAT...TCGGTCCTTGTATTTGAGGGTTTTGCATCCCTCAAATACCATATGTTTTATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR TCA 90 bp CAAATAAAACATATGGTATTTGAGGGATGCAAAACCCTCAAATACAAGGACCGACAAGATAGCTTACCTTaGTGGCAAGCAATGATACCA +
Preference number: 4 (lower is better)
Translates to: QIKHMVFEGCKTLKYKDRQDSLP*WQAMIP
Trigger: TGGTATCATTGCTTGCCATCAAGGTAAGCTATCTTG...TCGGTCCTTGTATTTGAGGGTTTTGCATCCCTCAAATACCATATGTTTTATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR TCA 90 bp CTTCCAATGGAATTTGGAATTTCCCTTACCTATCCTTGGTATCAGTTTAACCATTCAACTCTTTTGGCTTaGGAAAGTAAGCGCCTATTG +
Preference number: 4 (lower is better)
Translates to: LPMEFGISLTYPWYQFNHSTLLA*ESKRLL
Trigger: CAATAGGCGCTTACTTTCTCAAGCCAAAAGAGTTGA...ATGGTTAAACTGATACCAAGGATAGGTAAGGGAAATTCCAAATTCCATTGGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR TCA 90 bp CAAATAAAACATATGGTATTTGAGGGATGCAAAACCCTCAAATACAAGGACCGACATGATATTTGGAGATaGACTGAGGCTCACAGAATG +
Preference number: 4 (lower is better)
Translates to: QIKHMVFEGCKTLKYKDRHDIWR*TEAHRM
Trigger: CATTCTGTGAGCCTCAGTTCATCTCCAAATATCATG...TCGGTCCTTGTATTTGAGGGTTTTGCATCCCTCAAATACCATATGTTTTATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR TCA 90 bp TATATGTACAAAAAGGGCTCATGTAGGATGATGTTCCTTTCAGCATTGTTTGTAAGGAAGCATGACTATTaGAGGGACATAATCTGCAGG +
Preference number: 4 (lower is better)
Translates to: YMYKKGSCRMMFLSALFVRKHDY*RDIICR
Trigger: CCTGCAGATTATGTCCCTTCAATAGTCATGCTTCCT...TACAAACAATGCTGAAAGGAACATCATCCTACATGAGCCCTTTTTGTACATATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR TCA 90 bp CTTCCAATGGAATTTGGAATTTCCCTTACCTATCCTTGGTATCAGTTTAACCATAATGAAAAATGGTGCTaGTTTGGGTACTTTGGGTGG +
Preference number: 4 (lower is better)
Translates to: LPMEFGISLTYPWYQFNHNEKWC*FGYFGW
Trigger: CCACCCAAAGTACCCAAATCAGCACCATTTTTCATT...ATGGTTAAACTGATACCAAGGATAGGTAAGGGAAATTCCAAATTCCATTGGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR TCA 90 bp GGGCTACCTGGGTTTGCAATGGTTGTGAAAGAAAAGTATACTCAGCATTTTCTTTTTCAAGCAGAAATCTaGTTTTTGAGCCAAAACTCC +
Preference number: 4 (lower is better)
Translates to: GLPGFAMVVKEKYTQHFLFQAEI*FLSQNS
Trigger: GGAGTTTTGGCTCAAAAATCAGATTTCTGCTTGAAA...AAGAAAATGCTGAGTATACTTTTCTTTCACAACCATTGCAAACCCAGGTAGCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR TCA 90 bp GGGCTACCTGGGTTTGCAATGGTTGTGAAAGAAAAGTATACTCAGCATTTTCTTTTCTTCCACCTGGGATaGCAAATTTGTTATTTCTTC +
Preference number: 4 (lower is better)
Translates to: GLPGFAMVVKEKYTQHFLFFHLG*QICYFF
Trigger: GAAGAAATAACAAATTTGTCATCCCAGGTGGAAGAA...AAGAAAATGCTGAGTATACTTTTCTTTCACAACCATTGCAAACCCAGGTAGCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR TCA 90 bp CTTCCAATGGAATTTGGAATTTCCCTTACCTATCCTTGGTATCAGTTTAACCATGGCTGTGCTAGAAGATaGTTAGTTTATCCTCCAACT +
Preference number: 4 (lower is better)
Translates to: LPMEFGISLTYPWYQFNHGCARR*LVYPPT
Trigger: AGTTGGAGGATAAACTAATCATCTTCTAGCACAGCC...ATGGTTAAACTGATACCAAGGATAGGTAAGGGAAATTCCAAATTCCATTGGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR TCA 90 bp CAAATAAAACATATGGTATTTGAGGGATGCAAAACCCTCAAATACAAGGACCGAGGCTGTGCTAGAAGATaGTTAGTTTATCCTCCAACT +
Preference number: 4 (lower is better)
Translates to: QIKHMVFEGCKTLKYKDRGCARR*LVYPPT
Trigger: AGTTGGAGGATAAACTAATCATCTTCTAGCACAGCC...TCGGTCCTTGTATTTGAGGGTTTTGCATCCCTCAAATACCATATGTTTTATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR TCA 90 bp CTAACAACGAACGAGAATGCTACTGGTGTTCATATTCAAACCACTGTGTTTCATGGTTTGCAATGGTTGTaGAAGAAAAGTATACTCAGC +
Preference number: 4 (lower is better)
Translates to: LTTNENATGVHIQTTVFHGLQWL*KKSILS
Trigger: GCTGAGTATACTTTTCTTTCACAACCATTGCAAACC...ATGAAACACAGTGGTTTGAATATGAACACCAGTAGCATTCTCGTTCGTTGTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR TCA 90 bp GGGCTACCTGGGTTTGCAATGGTTGTGAAAGAAAAGTATACTCAGCATTTTCTTGATGGAAACAGTACATaGAAGGTTCTAGAAGATTAC +
Preference number: 4 (lower is better)
Translates to: GLPGFAMVVKEKYTQHFLDGNST*KVLEDY
Trigger: GTAATCTTCTAGAACCTTTCATGTACTGTTTCCATC...AAGAAAATGCTGAGTATACTTTTCTTTCACAACCATTGCAAACCCAGGTAGCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR TCA 90 bp CTAACAACGAACGAGAATGCTACTGGTGTTCATATTCAAACCACTGTGTTTCATGGTTATACTCTGGCCTaGAATTCAAATCCTAAGCAT +
Preference number: 4 (lower is better)
Translates to: LTTNENATGVHIQTTVFHGYTLA*NSNPKH
Trigger: ATGCTTAGGATTTGAATTTCAGGCCAGAGTATAACC...ATGAAACACAGTGGTTTGAATATGAACACCAGTAGCATTCTCGTTCGTTGTTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR TCA 90 bp AAGCATATACCACAGAGAGAGCCTTATATGTACAAAAAGGGCTCATGTAGGATGATACATGACGTGAAATaGGCACATGTAAACATAGGA +
Preference number: 4 (lower is better)
Translates to: KHIPQREPYMYKKGSCRMIHDVK*AHVNIG
Trigger: TCCTATGTTTACATGTGCTCATTTCACGTCATGTAT...CATCCTACATGAGCCCTTTTTGTACATATAAGGCTCTCTCTGTGGTATATGCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR TCA 90 bp CTAACAACGAACGAGAATGCTACTGGTGTTCATATTCAAACCACTGTGTTTCATGGCTTTACCCAAATCTaGGAACATACCAAAGTAATG +
Preference number: 4 (lower is better)
Translates to: LTTNENATGVHIQTTVFHGFTQI*EHTKVM
Trigger: CATTACTTTGGTATGTTCTCAGATTTGGGTAAAGCC...ATGAAACACAGTGGTTTGAATATGAACACCAGTAGCATTCTCGTTCGTTGTTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR GCA 90 bp CTAACAACGAACGAGAATGCTACTGGTGTTCATATTCAAACCACTGTGTTTCATGGCTTCCTTGTTCACTaGCCAGAAGTATTTTATTCA +
Preference number: 4 (lower is better)
Translates to: LTTNENATGVHIQTTVFHGFLVH*PEVFYS
Trigger: TGAATAAAATACTTCTGGGCAGTGAACAAGGAAGCC...ATGAAACACAGTGGTTTGAATATGAACACCAGTAGCATTCTCGTTCGTTGTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR GCA 90 bp CTTCCAATGGAATTTGGAATTTCCCTTACCTATCCTTGGTATCAGTTTAACCATTTTACATTCCACAACTaGAGGCTTCCTTGTTCACTG +
Preference number: 4 (lower is better)
Translates to: LPMEFGISLTYPWYQFNHFTFHN*RLPCSL
Trigger: CAGTGAACAAGGAAGCCTGCAGTTGTGGAATGTAAA...ATGGTTAAACTGATACCAAGGATAGGTAAGGGAAATTCCAAATTCCATTGGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR GCA 90 bp AAGCATATACCACAGAGAGAGCCTTATATGTACAAAAAGGGCTCATGTAGGATGCGATGTATGCCAGACTaGATGTTATATACATCTACA +
Preference number: 4 (lower is better)
Translates to: KHIPQREPYMYKKGSCRMRCMPD*MLYTST
Trigger: TGTAGATGTATATAACATGCAGTCTGGCATACATCG...CATCCTACATGAGCCCTTTTTGTACATATAAGGCTCTCTCTGTGGTATATGCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR GCA 90 bp AAGCATATACCACAGAGAGAGCCTTATATGTACAAAAAGGGCTCATGTAGGATGAACTTCCTCGATGTATaGCAGACTGCATGTTATATA +
Preference number: 4 (lower is better)
Translates to: KHIPQREPYMYKKGSCRMNFLDV*QTACYI
Trigger: TATATAACATGCAGTCTGGCATACATCGAGGAAGTT...CATCCTACATGAGCCCTTTTTGTACATATAAGGCTCTCTCTGTGGTATATGCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR GCA 90 bp CAAATAAAACATATGGTATTTGAGGGATGCAAAACCCTCAAATACAAGGACCGATGTGAGCTTGATCCTTaGCAAAACTTCCTCGATGTA +
Preference number: 4 (lower is better)
Translates to: QIKHMVFEGCKTLKYKDRCELDP*QNFLDV
Trigger: TACATCGAGGAAGTTTTGGCAAGGATCAAGCTCACA...TCGGTCCTTGTATTTGAGGGTTTTGCATCCCTCAAATACCATATGTTTTATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR GCA 90 bp CTTCCAATGGAATTTGGAATTTCCCTTACCTATCCTTGGTATCAGTTTAACCATTGTGAGCTTGATCCTTaGCAAAACTTCCTCGATGTA +
Preference number: 4 (lower is better)
Translates to: LPMEFGISLTYPWYQFNHCELDP*QNFLDV
Trigger: TACATCGAGGAAGTTTTGGCAAGGATCAAGCTCACA...ATGGTTAAACTGATACCAAGGATAGGTAAGGGAAATTCCAAATTCCATTGGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR GCA 90 bp CTAACAACGAACGAGAATGCTACTGGTGTTCATATTCAAACCACTGTGTTTCATTGTTATCTACATGTCTaGAGTGTCAGTAAAAGGCCA +
Preference number: 4 (lower is better)
Translates to: LTTNENATGVHIQTTVFHCYLHV*SVSKRP
Trigger: TGGCCTTTTACTGACACTGCAGACATGTAGATAACA...ATGAAACACAGTGGTTTGAATATGAACACCAGTAGCATTCTCGTTCGTTGTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR GCA 90 bp GGGCTACCTGGGTTTGCAATGGTTGTGAAAGAAAAGTATACTCAGCATTTTCTTATGGTATTTGAGGGATaGAAAACCCTCAAATACAAG +
Preference number: 4 (lower is better)
Translates to: GLPGFAMVVKEKYTQHFLMVFEG*KTLKYK
Trigger: CTTGTATTTGAGGGTTTTGCATCCCTCAAATACCAT...AAGAAAATGCTGAGTATACTTTTCTTTCACAACCATTGCAAACCCAGGTAGCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CCA 90 bp TATATGTACAAAAAGGGCTCATGTAGGATGATGTTCCTTTCAGCATTGTTTGTACTCACTTGGGCAACTTaGATAAGTGTAGATTCCTCC +
Preference number: 4 (lower is better)
Translates to: YMYKKGSCRMMFLSALFVLTWAT*ISVDSS
Trigger: GGAGGAATCTACACTTATCCAAGTTGCCCAAGTGAG...TACAAACAATGCTGAAAGGAACATCATCCTACATGAGCCCTTTTTGTACATATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506538.6
CDS-3UTR CCA 90 bp TATATGTACAAAAAGGGCTCATGTAGGATGATGTTCCTTTCAGCATTGTTTGTAAGGGAACTGCTCACTTaGGCAACTTGGATAAGTGTA +
Preference number: 4 (lower is better)
Translates to: YMYKKGSCRMMFLSALFVRELLT*ATWISV
Trigger: TACACTTATCCAAGTTGCCCAAGTGAGCAGTTCCCT...TACAAACAATGCTGAAAGGAACATCATCCTACATGAGCCCTTTTTGTACATATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506538.6
CDS-3UTR CCA 90 bp GGGCTACCTGGGTTTGCAATGGTTGTGAAAGAAAAGTATACTCAGCATTTTCTTATTTGTGACAAGAAGTaGCTCTCTATGGAGAAATGT +
Preference number: 4 (lower is better)
Translates to: GLPGFAMVVKEKYTQHFLICDKK*LSMEKC
Trigger: ACATTTCTCCATAGAGAGCCACTTCTTGTCACAAAT...AAGAAAATGCTGAGTATACTTTTCTTTCACAACCATTGCAAACCCAGGTAGCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CCA 90 bp CTAACAACGAACGAGAATGCTACTGGTGTTCATATTCAAACCACTGTGTTTCATTTTCTTCAACTCTTTTaGCTTGAGAAAGTAAGCGCC +
Preference number: 4 (lower is better)
Translates to: LTTNENATGVHIQTTVFHFLQLF*LEKVSA
Trigger: GGCGCTTACTTTCTCAAGCCAAAAGAGTTGAAGAAA...ATGAAACACAGTGGTTTGAATATGAACACCAGTAGCATTCTCGTTCGTTGTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CCA 90 bp CTTCCAATGGAATTTGGAATTTCCCTTACCTATCCTTGGTATCAGTTTAACCATGTTGTAACTGTCAACTaGTTTAATCCATCCACTGCG +
Preference number: 4 (lower is better)
Translates to: LPMEFGISLTYPWYQFNHVVTVN*FNPSTA
Trigger: CGCAGTGGATGGATTAAACCAGTTGACAGTTACAAC...ATGGTTAAACTGATACCAAGGATAGGTAAGGGAAATTCCAAATTCCATTGGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CCA 90 bp TATATGTACAAAAAGGGCTCATGTAGGATGATGTTCCTTTCAGCATTGTTTGTAAATGCAAGGTATGCCTaGGCTAACTCAAAATCACGC +
Preference number: 4 (lower is better)
Translates to: YMYKKGSCRMMFLSALFVNARYA*ANSKSR
Trigger: GCGTGATTTTGAGTTAGCCCAGGCATACCTTGCATT...TACAAACAATGCTGAAAGGAACATCATCCTACATGAGCCCTTTTTGTACATATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CCA 90 bp CTTCCAATGGAATTTGGAATTTCCCTTACCTATCCTTGGTATCAGTTTAACCATAAGAGTGATTGCAAATaGGTCCAGTTTTCTTCCACC +
Preference number: 4 (lower is better)
Translates to: LPMEFGISLTYPWYQFNHKSDCK*VQFSST
Trigger: GGTGGAAGAAAACTGGACCCATTTGCAATCACTCTT...ATGGTTAAACTGATACCAAGGATAGGTAAGGGAAATTCCAAATTCCATTGGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CCA 90 bp CAAATAAAACATATGGTATTTGAGGGATGCAAAACCCTCAAATACAAGGACCGAAAGAGTGATTGCAAATaGGTCCAGTTTTCTTCCACC +
Preference number: 4 (lower is better)
Translates to: QIKHMVFEGCKTLKYKDRKSDCK*VQFSST
Trigger: GGTGGAAGAAAACTGGACCCATTTGCAATCACTCTT...TCGGTCCTTGTATTTGAGGGTTTTGCATCCCTCAAATACCATATGTTTTATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CCA 90 bp AAGCATATACCACAGAGAGAGCCTTATATGTACAAAAAGGGCTCATGTAGGATGTCTTCCAATGGAATTTaGAATTTCCCTTACCTATCC +
Preference number: 4 (lower is better)
Translates to: KHIPQREPYMYKKGSCRMSSNGI*NFPYLS
Trigger: GGATAGGTAAGGGAAATTCCAAATTCCATTGGAAGA...CATCCTACATGAGCCCTTTTTGTACATATAAGGCTCTCTCTGTGGTATATGCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CCA 90 bp GGGCTACCTGGGTTTGCAATGGTTGTGAAAGAAAAGTATACTCAGCATTTTCTTTCTTCCAATGGAATTTaGAATTTCCCTTACCTATCC +
Preference number: 4 (lower is better)
Translates to: GLPGFAMVVKEKYTQHFLSSNGI*NFPYLS
Trigger: GGATAGGTAAGGGAAATTCCAAATTCCATTGGAAGA...AAGAAAATGCTGAGTATACTTTTCTTTCACAACCATTGCAAACCCAGGTAGCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CCA 90 bp GGGCTACCTGGGTTTGCAATGGTTGTGAAAGAAAAGTATACTCAGCATTTTCTTAAGGCCATCTTCCAATaGAATTTGGAATTTCCCTTA +
Preference number: 4 (lower is better)
Translates to: GLPGFAMVVKEKYTQHFLKAIFQ*NLEFPL
Trigger: TAAGGGAAATTCCAAATTCCATTGGAAGATGGCCTT...AAGAAAATGCTGAGTATACTTTTCTTTCACAACCATTGCAAACCCAGGTAGCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CCA 90 bp CTAACAACGAACGAGAATGCTACTGGTGTTCATATTCAAACCACTGTGTTTCATGAACGAGAATGCTACTaGTGTTCATATTCAAACCAC +
Preference number: 4 (lower is better)
Translates to: LTTNENATGVHIQTTVFHERECY*CSYSNH
Trigger: GTGGTTTGAATATGAACACCAGTAGCATTCTCGTTC...ATGAAACACAGTGGTTTGAATATGAACACCAGTAGCATTCTCGTTCGTTGTTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CCA 90 bp AAGCATATACCACAGAGAGAGCCTTATATGTACAAAAAGGGCTCATGTAGGATGGAGGACTGCTTCTTTTaGAGATCATTCTACAAAACT +
Preference number: 4 (lower is better)
Translates to: KHIPQREPYMYKKGSCRMEDCFF*RSFYKT
Trigger: AGTTTTGTAGAATGATCTCCAAAAGAAGCAGTCCTC...CATCCTACATGAGCCCTTTTTGTACATATAAGGCTCTCTCTGTGGTATATGCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CCA 90 bp GGGCTACCTGGGTTTGCAATGGTTGTGAAAGAAAAGTATACTCAGCATTTTCTTGAGGACTGCTTCTTTTaGAGATCATTCTACAAAACT +
Preference number: 4 (lower is better)
Translates to: GLPGFAMVVKEKYTQHFLEDCFF*RSFYKT
Trigger: AGTTTTGTAGAATGATCTCCAAAAGAAGCAGTCCTC...AAGAAAATGCTGAGTATACTTTTCTTTCACAACCATTGCAAACCCAGGTAGCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CCA 90 bp CTAACAACGAACGAGAATGCTACTGGTGTTCATATTCAAACCACTGTGTTTCATTTGATACAGCCATTCTaGAACCCAAATGGAAGTATC +
Preference number: 4 (lower is better)
Translates to: LTTNENATGVHIQTTVFHLIQPF*NPNGSI
Trigger: GATACTTCCATTTGGGTTCCAGAATGGCTGTATCAA...ATGAAACACAGTGGTTTGAATATGAACACCAGTAGCATTCTCGTTCGTTGTTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR TCA 90 bp CAAATAAAACATATGGTATTTGAGGGATGCAAAACCCTCAAATACAAGGACCGATGGATTTCTGCCTTATaGCCCTTAAAGGTATGTACT +
Preference number: 4 (lower is better)
Translates to: QIKHMVFEGCKTLKYKDRWISAL*PLKVCT
Trigger: AGTACATACCTTTAAGGGTCATAAGGCAGAAATCCA...TCGGTCCTTGTATTTGAGGGTTTTGCATCCCTCAAATACCATATGTTTTATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR TCA 90 bp CTTCCAATGGAATTTGGAATTTCCCTTACCTATCCTTGGTATCAGTTTAACCATTGGATTTCTGCCTTATaGCCCTTAAAGGTATGTACT +
Preference number: 4 (lower is better)
Translates to: LPMEFGISLTYPWYQFNHWISAL*PLKVCT
Trigger: AGTACATACCTTTAAGGGTCATAAGGCAGAAATCCA...ATGGTTAAACTGATACCAAGGATAGGTAAGGGAAATTCCAAATTCCATTGGAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR TCA 90 bp CTAACAACGAACGAGAATGCTACTGGTGTTCATATTCAAACCACTGTGTTTCATAATGATAACTTGACCTaGCATAAGACCAATAGCAAC +
Preference number: 4 (lower is better)
Translates to: LTTNENATGVHIQTTVFHNDNLT*HKTNSN
Trigger: GTTGCTATTGGTCTTATGTCAGGTCAAGTTATCATT...ATGAAACACAGTGGTTTGAATATGAACACCAGTAGCATTCTCGTTCGTTGTTAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR TCA 90 bp TATATGTACAAAAAGGGCTCATGTAGGATGATGTTCCTTTCAGCATTGTTTGTAGTAAGAGGAGCACTATaGCCCATTCTGAATCTCAAA +
Preference number: 4 (lower is better)
Translates to: YMYKKGSCRMMFLSALFVVRGAL*PILNLK
Trigger: TTTGAGATTCAGAATGGGTCATAGTGCTCCTCTTAC...TACAAACAATGCTGAAAGGAACATCATCCTACATGAGCCCTTTTTGTACATATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR TCA 90 bp TATATGTACAAAAAGGGCTCATGTAGGATGATGTTCCTTTCAGCATTGTTTGTATCAACTCTTTTGGCTTaGGAAAGTAAGCGCCTATTG +
Preference number: 4 (lower is better)
Translates to: YMYKKGSCRMMFLSALFVSTLLA*ESKRLL
Trigger: CAATAGGCGCTTACTTTCTCAAGCCAAAAGAGTTGA...TACAAACAATGCTGAAAGGAACATCATCCTACATGAGCCCTTTTTGTACATATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR TCA 90 bp CAAATAAAACATATGGTATTTGAGGGATGCAAAACCCTCAAATACAAGGACCGATATTTGGAGATGAACTaGGGCTCACAGAATGGATTA +
Preference number: 4 (lower is better)
Translates to: QIKHMVFEGCKTLKYKDRYLEMN*GSQNGL
Trigger: TAATCCATTCTGTGAGCCTCAGTTCATCTCCAAATA...TCGGTCCTTGTATTTGAGGGTTTTGCATCCCTCAAATACCATATGTTTTATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR TCA 90 bp TATATGTACAAAAAGGGCTCATGTAGGATGATGTTCCTTTCAGCATTGTTTGTACATGATATTTGGAGATaGACTGAGGCTCACAGAATG +
Preference number: 4 (lower is better)
Translates to: YMYKKGSCRMMFLSALFVHDIWR*TEAHRM
Trigger: CATTCTGTGAGCCTCAGTTCATCTCCAAATATCATG...TACAAACAATGCTGAAAGGAACATCATCCTACATGAGCCCTTTTTGTACATATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR TCA 90 bp CTAACAACGAACGAGAATGCTACTGGTGTTCATATTCAAACCACTGTGTTTCATTTCTACTGTTTCTTCTaGTACTTCTACATCTTGGGT +
Preference number: 4 (lower is better)
Translates to: LTTNENATGVHIQTTVFHFYCFF*YFYILG
Trigger: ACCCAAGATGTAGAAGTATCAGAAGAAACAGTAGAA...ATGAAACACAGTGGTTTGAATATGAACACCAGTAGCATTCTCGTTCGTTGTTAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR TCA 90 bp CTAACAACGAACGAGAATGCTACTGGTGTTCATATTCAAACCACTGTGTTTCATTTTCAAGCAGAAATCTaGTTTTTGAGCCAAAACTCC +
Preference number: 4 (lower is better)
Translates to: LTTNENATGVHIQTTVFHFQAEI*FLSQNS
Trigger: GGAGTTTTGGCTCAAAAATCAGATTTCTGCTTGAAA...ATGAAACACAGTGGTTTGAATATGAACACCAGTAGCATTCTCGTTCGTTGTTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR TCA 90 bp CTAACAACGAACGAGAATGCTACTGGTGTTCATATTCAAACCACTGTGTTTCATTTCTTCCACCTGGGATaGCAAATTTGTTATTTCTTC +
Preference number: 4 (lower is better)
Translates to: LTTNENATGVHIQTTVFHFFHLG*QICYFF
Trigger: GAAGAAATAACAAATTTGTCATCCCAGGTGGAAGAA...ATGAAACACAGTGGTTTGAATATGAACACCAGTAGCATTCTCGTTCGTTGTTAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR TCA 90 bp TATATGTACAAAAAGGGCTCATGTAGGATGATGTTCCTTTCAGCATTGTTTGTAGCTTTGATTGAAGAGTaGTTGCAAATGGGTCCAGTT +
Preference number: 4 (lower is better)
Translates to: YMYKKGSCRMMFLSALFVALIEE*LQMGPV
Trigger: AACTGGACCCATTTGCAATCACTCTTCAATCAAAGC...TACAAACAATGCTGAAAGGAACATCATCCTACATGAGCCCTTTTTGTACATATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR TCA 90 bp CAAATAAAACATATGGTATTTGAGGGATGCAAAACCCTCAAATACAAGGACCGAAGCAATACTTCACAGTaGACATGCAGCATCTCTTTA +
Preference number: 4 (lower is better)
Translates to: QIKHMVFEGCKTLKYKDRSNTSQ*TCSISL
Trigger: TAAAGAGATGCTGCATGTTCACTGTGAAGTATTGCT...TCGGTCCTTGTATTTGAGGGTTTTGCATCCCTCAAATACCATATGTTTTATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR TCA 90 bp CTTCCAATGGAATTTGGAATTTCCCTTACCTATCCTTGGTATCAGTTTAACCATAGCAATACTTCACAGTaGACATGCAGCATCTCTTTA +
Preference number: 4 (lower is better)
Translates to: LPMEFGISLTYPWYQFNHSNTSQ*TCSISL
Trigger: TAAAGAGATGCTGCATGTTCACTGTGAAGTATTGCT...ATGGTTAAACTGATACCAAGGATAGGTAAGGGAAATTCCAAATTCCATTGGAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR TCA 90 bp CTTCCAATGGAATTTGGAATTTCCCTTACCTATCCTTGGTATCAGTTTAACCATCACATTTCTGATCCATaGACAACTTCCTTTCAGTAC +
Preference number: 4 (lower is better)
Translates to: LPMEFGISLTYPWYQFNHHISDP*TTSFQY
Trigger: GTACTGAAAGGAAGTTGTTCATGGATCAGAAATGTG...ATGGTTAAACTGATACCAAGGATAGGTAAGGGAAATTCCAAATTCCATTGGAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR TCA 90 bp TATATGTACAAAAAGGGCTCATGTAGGATGATGTTCCTTTCAGCATTGTTTGTAAACCACTGTGTTTCATaGAAGACCCAACTTTTGAGG +
Preference number: 4 (lower is better)
Translates to: YMYKKGSCRMMFLSALFVNHCVS*KTQLLR
Trigger: CCTCAAAAGTTGGGTCTTTCATGAAACACAGTGGTT...TACAAACAATGCTGAAAGGAACATCATCCTACATGAGCCCTTTTTGTACATATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR TCA 90 bp CTTCCAATGGAATTTGGAATTTCCCTTACCTATCCTTGGTATCAGTTTAACCATAGAGGATATTGGGACTaGAGATGGTTTTCAAAAAGC +
Preference number: 4 (lower is better)
Translates to: LPMEFGISLTYPWYQFNHRGYWD*RWFSKS
Trigger: GCTTTTTGAAAACCATCTTCAGTCCCAATATCCTCT...ATGGTTAAACTGATACCAAGGATAGGTAAGGGAAATTCCAAATTCCATTGGAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR TCA 90 bp CTAACAACGAACGAGAATGCTACTGGTGTTCATATTCAAACCACTGTGTTTCATATACATGACGTGAAATaGGCACATGTAAACATAGGA +
Preference number: 4 (lower is better)
Translates to: LTTNENATGVHIQTTVFHIHDVK*AHVNIG
Trigger: TCCTATGTTTACATGTGCTCATTTCACGTCATGTAT...ATGAAACACAGTGGTTTGAATATGAACACCAGTAGCATTCTCGTTCGTTGTTAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR GCA 90 bp GGGCTACCTGGGTTTGCAATGGTTGTGAAAGAAAAGTATACTCAGCATTTTCTTAACAGAATTACTTACTaGAACCAGACTAAGTTTCTG +
Preference number: 4 (lower is better)
Translates to: GLPGFAMVVKEKYTQHFLNRITY*NQTKFL
Trigger: CAGAAACTTAGTCTGGTTGCAGTAAGTAATTCTGTT...AAGAAAATGCTGAGTATACTTTTCTTTCACAACCATTGCAAACCCAGGTAGCCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR GCA 90 bp CTTCCAATGGAATTTGGAATTTCCCTTACCTATCCTTGGTATCAGTTTAACCATGGCTTCCTTGTTCACTaGCCAGAAGTATTTTATTCA +
Preference number: 4 (lower is better)
Translates to: LPMEFGISLTYPWYQFNHGFLVH*PEVFYS
Trigger: TGAATAAAATACTTCTGGGCAGTGAACAAGGAAGCC...ATGGTTAAACTGATACCAAGGATAGGTAAGGGAAATTCCAAATTCCATTGGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR GCA 90 bp AAGCATATACCACAGAGAGAGCCTTATATGTACAAAAAGGGCTCATGTAGGATGTATATCCACTGCTGTTaGAGTTATGTCATCTTTCTT +
Preference number: 4 (lower is better)
Translates to: KHIPQREPYMYKKGSCRMYIHCC*SYVIFL
Trigger: AAGAAAGATGACATAACTGCAACAGCAGTGGATATA...CATCCTACATGAGCCCTTTTTGTACATATAAGGCTCTCTCTGTGGTATATGCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR GCA 90 bp CTAACAACGAACGAGAATGCTACTGGTGTTCATATTCAAACCACTGTGTTTCATATTATTTTGTTCAGGTaGAGCATATCTGGGTACAAG +
Preference number: 4 (lower is better)
Translates to: LTTNENATGVHIQTTVFHIILFR*SISGYK
Trigger: CTTGTACCCAGATATGCTGCACCTGAACAAAATAAT...ATGAAACACAGTGGTTTGAATATGAACACCAGTAGCATTCTCGTTCGTTGTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR GCA 90 bp GGGCTACCTGGGTTTGCAATGGTTGTGAAAGAAAAGTATACTCAGCATTTTCTTTTTACCACTTTAGACTaGTGGGGATCATTATTTTGT +
Preference number: 4 (lower is better)
Translates to: GLPGFAMVVKEKYTQHFLFTTLD*WGSLFC
Trigger: ACAAAATAATGATCCCCAGCAGTCTAAAGTGGTAAA...AAGAAAATGCTGAGTATACTTTTCTTTCACAACCATTGCAAACCCAGGTAGCCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR GCA 90 bp CTAACAACGAACGAGAATGCTACTGGTGTTCATATTCAAACCACTGTGTTTCATATTTTCAAGAAGCTCTaGATAACTTCTATGGACCCA +
Preference number: 4 (lower is better)
Translates to: LTTNENATGVHIQTTVFHIFKKL*ITSMDP
Trigger: TGGGTCCATAGAAGTTATGCAGAGCTTCTTGAAAAT...ATGAAACACAGTGGTTTGAATATGAACACCAGTAGCATTCTCGTTCGTTGTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CCA 90 bp CTAACAACGAACGAGAATGCTACTGGTGTTCATATTCAAACCACTGTGTTTCATATTTGTGACAAGAAGTaGCTCTCTATGGAGAAATGT +
Preference number: 4 (lower is better)
Translates to: LTTNENATGVHIQTTVFHICDKK*LSMEKC
Trigger: ACATTTCTCCATAGAGAGCCACTTCTTGTCACAAAT...ATGAAACACAGTGGTTTGAATATGAACACCAGTAGCATTCTCGTTCGTTGTTAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CCA 90 bp AAGCATATACCACAGAGAGAGCCTTATATGTACAAAAAGGGCTCATGTAGGATGCTCATTCAACTGTTCTaGCGAATCATATTCTATCAA +
Preference number: 4 (lower is better)
Translates to: KHIPQREPYMYKKGSCRMLIQLF*RIIFYQ
Trigger: TTGATAGAATATGATTCGCCAGAACAGTTGAATGAG...CATCCTACATGAGCCCTTTTTGTACATATAAGGCTCTCTCTGTGGTATATGCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CCA 90 bp CTTCCAATGGAATTTGGAATTTCCCTTACCTATCCTTGGTATCAGTTTAACCATCTGATTTGGGTACTTTaGGTGGTTCCTTTGGTTTAT +
Preference number: 4 (lower is better)
Translates to: LPMEFGISLTYPWYQFNHLIWVL*VVPLVY
Trigger: ATAAACCAAAGGAACCACCCAAAGTACCCAAATCAG...ATGGTTAAACTGATACCAAGGATAGGTAAGGGAAATTCCAAATTCCATTGGAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CCA 90 bp TATATGTACAAAAAGGGCTCATGTAGGATGATGTTCCTTTCAGCATTGTTTGTAAAAATGGTGCTGATTTaGGTACTTTGGGTGGTTCCT +
Preference number: 4 (lower is better)
Translates to: YMYKKGSCRMMFLSALFVKMVLI*VLWVVP
Trigger: AGGAACCACCCAAAGTACCCAAATCAGCACCATTTT...TACAAACAATGCTGAAAGGAACATCATCCTACATGAGCCCTTTTTGTACATATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR TCA 90 bp TATATGTACAAAAAGGGCTCATGTAGGATGATGTTCCTTTCAGCATTGTTTGTATATTTGGAGATGAACTaGGGCTCACAGAATGGATTA +
Preference number: 4 (lower is better)
Translates to: YMYKKGSCRMMFLSALFVYLEMN*GSQNGL
Trigger: TAATCCATTCTGTGAGCCTCAGTTCATCTCCAAATA...TACAAACAATGCTGAAAGGAACATCATCCTACATGAGCCCTTTTTGTACATATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR TCA 90 bp CAAATAAAACATATGGTATTTGAGGGATGCAAAACCCTCAAATACAAGGACCGATTCTACTGTTTCTTCTaGTACTTCTACATCTTGGGT +
Preference number: 4 (lower is better)
Translates to: QIKHMVFEGCKTLKYKDRFYCFF*YFYILG
Trigger: ACCCAAGATGTAGAAGTATCAGAAGAAACAGTAGAA...TCGGTCCTTGTATTTGAGGGTTTTGCATCCCTCAAATACCATATGTTTTATTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR TCA 90 bp CAAATAAAACATATGGTATTTGAGGGATGCAAAACCCTCAAATACAAGGACCGATTTCAAGCAGAAATCTaGTTTTTGAGCCAAAACTCC +
Preference number: 4 (lower is better)
Translates to: QIKHMVFEGCKTLKYKDRFQAEI*FLSQNS
Trigger: GGAGTTTTGGCTCAAAAATCAGATTTCTGCTTGAAA...TCGGTCCTTGTATTTGAGGGTTTTGCATCCCTCAAATACCATATGTTTTATTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR TCA 90 bp CAAATAAAACATATGGTATTTGAGGGATGCAAAACCCTCAAATACAAGGACCGAATTCTTTCAGAAGGTTaGGAGCAGTGTCATACTTAT +
Preference number: 4 (lower is better)
Translates to: QIKHMVFEGCKTLKYKDRILSEG*EQCHTY
Trigger: ATAAGTATGACACTGCTCTCAACCTTCTGAAAGAAT...TCGGTCCTTGTATTTGAGGGTTTTGCATCCCTCAAATACCATATGTTTTATTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR TCA 90 bp TATATGTACAAAAAGGGCTCATGTAGGATGATGTTCCTTTCAGCATTGTTTGTAGGTTTGCAATGGTTGTaGAAGAAAAGTATACTCAGC +
Preference number: 4 (lower is better)
Translates to: YMYKKGSCRMMFLSALFVGLQWL*KKSILS
Trigger: GCTGAGTATACTTTTCTTTCACAACCATTGCAAACC...TACAAACAATGCTGAAAGGAACATCATCCTACATGAGCCCTTTTTGTACATATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR TCA 90 bp CAAATAAAACATATGGTATTTGAGGGATGCAAAACCCTCAAATACAAGGACCGAGATGGAAACAGTACATaGAAGGTTCTAGAAGATTAC +
Preference number: 4 (lower is better)
Translates to: QIKHMVFEGCKTLKYKDRDGNST*KVLEDY
Trigger: GTAATCTTCTAGAACCTTTCATGTACTGTTTCCATC...TCGGTCCTTGTATTTGAGGGTTTTGCATCCCTCAAATACCATATGTTTTATTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR GCA 90 bp CTAACAACGAACGAGAATGCTACTGGTGTTCATATTCAAACCACTGTGTTTCATAACAGAATTACTTACTaGAACCAGACTAAGTTTCTG +
Preference number: 4 (lower is better)
Translates to: LTTNENATGVHIQTTVFHNRITY*NQTKFL
Trigger: CAGAAACTTAGTCTGGTTGCAGTAAGTAATTCTGTT...ATGAAACACAGTGGTTTGAATATGAACACCAGTAGCATTCTCGTTCGTTGTTAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR GCA 90 bp TATATGTACAAAAAGGGCTCATGTAGGATGATGTTCCTTTCAGCATTGTTTGTAGGCTTCCTTGTTCACTaGCCAGAAGTATTTTATTCA +
Preference number: 4 (lower is better)
Translates to: YMYKKGSCRMMFLSALFVGFLVH*PEVFYS
Trigger: TGAATAAAATACTTCTGGGCAGTGAACAAGGAAGCC...TACAAACAATGCTGAAAGGAACATCATCCTACATGAGCCCTTTTTGTACATATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR GCA 90 bp CTAACAACGAACGAGAATGCTACTGGTGTTCATATTCAAACCACTGTGTTTCATAATTGCTGTAGAGTGTaGATTTCTCATTTGGTTGAT +
Preference number: 4 (lower is better)
Translates to: LTTNENATGVHIQTTVFHNCCRV*ISHLVD
Trigger: ATCAACCAAATGAGAAATGCACACTCTACAGCAATT...ATGAAACACAGTGGTTTGAATATGAACACCAGTAGCATTCTCGTTCGTTGTTAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR GCA 90 bp CTAACAACGAACGAGAATGCTACTGGTGTTCATATTCAAACCACTGTGTTTCATTATATCCACTGCTGTTaGAGTTATGTCATCTTTCTT +
Preference number: 4 (lower is better)
Translates to: LTTNENATGVHIQTTVFHYIHCC*SYVIFL
Trigger: AAGAAAGATGACATAACTGCAACAGCAGTGGATATA...ATGAAACACAGTGGTTTGAATATGAACACCAGTAGCATTCTCGTTCGTTGTTAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR GCA 90 bp CTTCCAATGGAATTTGGAATTTCCCTTACCTATCCTTGGTATCAGTTTAACCATCGATGTATGCCAGACTaGATGTTATATACATCTACA +
Preference number: 4 (lower is better)
Translates to: LPMEFGISLTYPWYQFNHRCMPD*MLYTST
Trigger: TGTAGATGTATATAACATGCAGTCTGGCATACATCG...ATGGTTAAACTGATACCAAGGATAGGTAAGGGAAATTCCAAATTCCATTGGAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR GCA 90 bp CTTCCAATGGAATTTGGAATTTCCCTTACCTATCCTTGGTATCAGTTTAACCATAACTTCCTCGATGTATaGCAGACTGCATGTTATATA +
Preference number: 4 (lower is better)
Translates to: LPMEFGISLTYPWYQFNHNFLDV*QTACYI
Trigger: TATATAACATGCAGTCTGGCATACATCGAGGAAGTT...ATGGTTAAACTGATACCAAGGATAGGTAAGGGAAATTCCAAATTCCATTGGAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR GCA 90 bp CAAATAAAACATATGGTATTTGAGGGATGCAAAACCCTCAAATACAAGGACCGAATTATTTTGTTCAGGTaGAGCATATCTGGGTACAAG +
Preference number: 4 (lower is better)
Translates to: QIKHMVFEGCKTLKYKDRIILFR*SISGYK
Trigger: CTTGTACCCAGATATGCTGCACCTGAACAAAATAAT...TCGGTCCTTGTATTTGAGGGTTTTGCATCCCTCAAATACCATATGTTTTATTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR GCA 90 bp CAAATAAAACATATGGTATTTGAGGGATGCAAAACCCTCAAATACAAGGACCGAATTTTCAAGAAGCTCTaGATAACTTCTATGGACCCA +
Preference number: 4 (lower is better)
Translates to: QIKHMVFEGCKTLKYKDRIFKKL*ITSMDP
Trigger: TGGGTCCATAGAAGTTATGCAGAGCTTCTTGAAAAT...TCGGTCCTTGTATTTGAGGGTTTTGCATCCCTCAAATACCATATGTTTTATTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR GCA 90 bp TATATGTACAAAAAGGGCTCATGTAGGATGATGTTCCTTTCAGCATTGTTTGTAAAACTTCAAGAGATGTaGTCACCAGCAGTTAACCAA +
Preference number: 4 (lower is better)
Translates to: YMYKKGSCRMMFLSALFVKLQEM*SPAVNQ
Trigger: TTGGTTAACTGCTGGTGAGCACATCTCTTGAAGTTT...TACAAACAATGCTGAAAGGAACATCATCCTACATGAGCCCTTTTTGTACATATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR GCA 90 bp CTTCCAATGGAATTTGGAATTTCCCTTACCTATCCTTGGTATCAGTTTAACCATATGGTATTTGAGGGATaGAAAACCCTCAAATACAAG +
Preference number: 4 (lower is better)
Translates to: LPMEFGISLTYPWYQFNHMVFEG*KTLKYK
Trigger: CTTGTATTTGAGGGTTTTGCATCCCTCAAATACCAT...ATGGTTAAACTGATACCAAGGATAGGTAAGGGAAATTCCAAATTCCATTGGAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CCA 90 bp CTAACAACGAACGAGAATGCTACTGGTGTTCATATTCAAACCACTGTGTTTCATATTTTTCATGTACCGTaGAAAATGACTGAAGAGTTC +
Preference number: 4 (lower is better)
Translates to: LTTNENATGVHIQTTVFHIFHVP*KMTEEF
Trigger: GAACTCTTCAGTCATTTTCCACGGTACATGAAAAAT...ATGAAACACAGTGGTTTGAATATGAACACCAGTAGCATTCTCGTTCGTTGTTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CCA 90 bp TATATGTACAAAAAGGGCTCATGTAGGATGATGTTCCTTTCAGCATTGTTTGTATTTCTTCAACTCTTTTaGCTTGAGAAAGTAAGCGCC +
Preference number: 4 (lower is better)
Translates to: YMYKKGSCRMMFLSALFVFLQLF*LEKVSA
Trigger: GGCGCTTACTTTCTCAAGCCAAAAGAGTTGAAGAAA...TACAAACAATGCTGAAAGGAACATCATCCTACATGAGCCCTTTTTGTACATATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CCA 90 bp CTAACAACGAACGAGAATGCTACTGGTGTTCATATTCAAACCACTGTGTTTCATCTCATTCAACTGTTCTaGCGAATCATATTCTATCAA +
Preference number: 4 (lower is better)
Translates to: LTTNENATGVHIQTTVFHLIQLF*RIIFYQ
Trigger: TTGATAGAATATGATTCGCCAGAACAGTTGAATGAG...ATGAAACACAGTGGTTTGAATATGAACACCAGTAGCATTCTCGTTCGTTGTTAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CCA 90 bp CTTCCAATGGAATTTGGAATTTCCCTTACCTATCCTTGGTATCAGTTTAACCATACCACTTTAGACTGCTaGGGATCATTATTTTGTTCA +
Preference number: 4 (lower is better)
Translates to: LPMEFGISLTYPWYQFNHTTLDC*GSLFCS
Trigger: TGAACAAAATAATGATCCCCAGCAGTCTAAAGTGGT...ATGGTTAAACTGATACCAAGGATAGGTAAGGGAAATTCCAAATTCCATTGGAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CCA 90 bp CAAATAAAACATATGGTATTTGAGGGATGCAAAACCCTCAAATACAAGGACCGAACCACTTTAGACTGCTaGGGATCATTATTTTGTTCA +
Preference number: 4 (lower is better)
Translates to: QIKHMVFEGCKTLKYKDRTTLDC*GSLFCS
Trigger: TGAACAAAATAATGATCCCCAGCAGTCTAAAGTGGT...TCGGTCCTTGTATTTGAGGGTTTTGCATCCCTCAAATACCATATGTTTTATTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CCA 90 bp CTTCCAATGGAATTTGGAATTTCCCTTACCTATCCTTGGTATCAGTTTAACCATTCTTCCAATGGAATTTaGAATTTCCCTTACCTATCC +
Preference number: 4 (lower is better)
Translates to: LPMEFGISLTYPWYQFNHSSNGI*NFPYLS
Trigger: GGATAGGTAAGGGAAATTCCAAATTCCATTGGAAGA...ATGGTTAAACTGATACCAAGGATAGGTAAGGGAAATTCCAAATTCCATTGGAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CCA 90 bp CTTCCAATGGAATTTGGAATTTCCCTTACCTATCCTTGGTATCAGTTTAACCATAAGGCCATCTTCCAATaGAATTTGGAATTTCCCTTA +
Preference number: 4 (lower is better)
Translates to: LPMEFGISLTYPWYQFNHKAIFQ*NLEFPL
Trigger: TAAGGGAAATTCCAAATTCCATTGGAAGATGGCCTT...ATGGTTAAACTGATACCAAGGATAGGTAAGGGAAATTCCAAATTCCATTGGAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CCA 90 bp TATATGTACAAAAAGGGCTCATGTAGGATGATGTTCCTTTCAGCATTGTTTGTAGAACGAGAATGCTACTaGTGTTCATATTCAAACCAC +
Preference number: 4 (lower is better)
Translates to: YMYKKGSCRMMFLSALFVERECY*CSYSNH
Trigger: GTGGTTTGAATATGAACACCAGTAGCATTCTCGTTC...TACAAACAATGCTGAAAGGAACATCATCCTACATGAGCCCTTTTTGTACATATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CCA 90 bp CTTCCAATGGAATTTGGAATTTCCCTTACCTATCCTTGGTATCAGTTTAACCATGAGGACTGCTTCTTTTaGAGATCATTCTACAAAACT +
Preference number: 4 (lower is better)
Translates to: LPMEFGISLTYPWYQFNHEDCFF*RSFYKT
Trigger: AGTTTTGTAGAATGATCTCCAAAAGAAGCAGTCCTC...ATGGTTAAACTGATACCAAGGATAGGTAAGGGAAATTCCAAATTCCATTGGAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR TCA 90 bp TATATGTACAAAAAGGGCTCATGTAGGATGATGTTCCTTTCAGCATTGTTTGTATTCTACTGTTTCTTCTaGTACTTCTACATCTTGGGT +
Preference number: 4 (lower is better)
Translates to: YMYKKGSCRMMFLSALFVFYCFF*YFYILG
Trigger: ACCCAAGATGTAGAAGTATCAGAAGAAACAGTAGAA...TACAAACAATGCTGAAAGGAACATCATCCTACATGAGCCCTTTTTGTACATATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR TCA 90 bp TATATGTACAAAAAGGGCTCATGTAGGATGATGTTCCTTTCAGCATTGTTTGTAATTCTTTCAGAAGGTTaGGAGCAGTGTCATACTTAT +
Preference number: 4 (lower is better)
Translates to: YMYKKGSCRMMFLSALFVILSEG*EQCHTY
Trigger: ATAAGTATGACACTGCTCTCAACCTTCTGAAAGAAT...TACAAACAATGCTGAAAGGAACATCATCCTACATGAGCCCTTTTTGTACATATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR TCA 90 bp TATATGTACAAAAAGGGCTCATGTAGGATGATGTTCCTTTCAGCATTGTTTGTAGATGGAAACAGTACATaGAAGGTTCTAGAAGATTAC +
Preference number: 4 (lower is better)
Translates to: YMYKKGSCRMMFLSALFVDGNST*KVLEDY
Trigger: GTAATCTTCTAGAACCTTTCATGTACTGTTTCCATC...TACAAACAATGCTGAAAGGAACATCATCCTACATGAGCCCTTTTTGTACATATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR TCA 90 bp TATATGTACAAAAAGGGCTCATGTAGGATGATGTTCCTTTCAGCATTGTTTGTAATACATGACGTGAAATaGGCACATGTAAACATAGGA +
Preference number: 4 (lower is better)
Translates to: YMYKKGSCRMMFLSALFVIHDVK*AHVNIG
Trigger: TCCTATGTTTACATGTGCTCATTTCACGTCATGTAT...TACAAACAATGCTGAAAGGAACATCATCCTACATGAGCCCTTTTTGTACATATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR GCA 90 bp CAAATAAAACATATGGTATTTGAGGGATGCAAAACCCTCAAATACAAGGACCGAAACAGAATTACTTACTaGAACCAGACTAAGTTTCTG +
Preference number: 4 (lower is better)
Translates to: QIKHMVFEGCKTLKYKDRNRITY*NQTKFL
Trigger: CAGAAACTTAGTCTGGTTGCAGTAAGTAATTCTGTT...TCGGTCCTTGTATTTGAGGGTTTTGCATCCCTCAAATACCATATGTTTTATTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR GCA 90 bp CTTCCAATGGAATTTGGAATTTCCCTTACCTATCCTTGGTATCAGTTTAACCATTATATCCACTGCTGTTaGAGTTATGTCATCTTTCTT +
Preference number: 4 (lower is better)
Translates to: LPMEFGISLTYPWYQFNHYIHCC*SYVIFL
Trigger: AAGAAAGATGACATAACTGCAACAGCAGTGGATATA...ATGGTTAAACTGATACCAAGGATAGGTAAGGGAAATTCCAAATTCCATTGGAAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR GCA 90 bp CAAATAAAACATATGGTATTTGAGGGATGCAAAACCCTCAAATACAAGGACCGATTTACCACTTTAGACTaGTGGGGATCATTATTTTGT +
Preference number: 4 (lower is better)
Translates to: QIKHMVFEGCKTLKYKDRFTTLD*WGSLFC
Trigger: ACAAAATAATGATCCCCAGCAGTCTAAAGTGGTAAA...TCGGTCCTTGTATTTGAGGGTTTTGCATCCCTCAAATACCATATGTTTTATTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR GCA 90 bp TATATGTACAAAAAGGGCTCATGTAGGATGATGTTCCTTTCAGCATTGTTTGTAATTTTCAAGAAGCTCTaGATAACTTCTATGGACCCA +
Preference number: 4 (lower is better)
Translates to: YMYKKGSCRMMFLSALFVIFKKL*ITSMDP
Trigger: TGGGTCCATAGAAGTTATGCAGAGCTTCTTGAAAAT...TACAAACAATGCTGAAAGGAACATCATCCTACATGAGCCCTTTTTGTACATATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR GCA 90 bp TATATGTACAAAAAGGGCTCATGTAGGATGATGTTCCTTTCAGCATTGTTTGTAATGGTATTTGAGGGATaGAAAACCCTCAAATACAAG +
Preference number: 4 (lower is better)
Translates to: YMYKKGSCRMMFLSALFVMVFEG*KTLKYK
Trigger: CTTGTATTTGAGGGTTTTGCATCCCTCAAATACCAT...TACAAACAATGCTGAAAGGAACATCATCCTACATGAGCCCTTTTTGTACATATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CCA 90 bp TATATGTACAAAAAGGGCTCATGTAGGATGATGTTCCTTTCAGCATTGTTTGTAATTTGTGACAAGAAGTaGCTCTCTATGGAGAAATGT +
Preference number: 4 (lower is better)
Translates to: YMYKKGSCRMMFLSALFVICDKK*LSMEKC
Trigger: ACATTTCTCCATAGAGAGCCACTTCTTGTCACAAAT...TACAAACAATGCTGAAAGGAACATCATCCTACATGAGCCCTTTTTGTACATATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CCA 90 bp CTTCCAATGGAATTTGGAATTTCCCTTACCTATCCTTGGTATCAGTTTAACCATATTTTTCATGTACCGTaGAAAATGACTGAAGAGTTC +
Preference number: 4 (lower is better)
Translates to: LPMEFGISLTYPWYQFNHIFHVP*KMTEEF
Trigger: GAACTCTTCAGTCATTTTCCACGGTACATGAAAAAT...ATGGTTAAACTGATACCAAGGATAGGTAAGGGAAATTCCAAATTCCATTGGAAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CCA 90 bp CTTCCAATGGAATTTGGAATTTCCCTTACCTATCCTTGGTATCAGTTTAACCATCTCATTCAACTGTTCTaGCGAATCATATTCTATCAA +
Preference number: 4 (lower is better)
Translates to: LPMEFGISLTYPWYQFNHLIQLF*RIIFYQ
Trigger: TTGATAGAATATGATTCGCCAGAACAGTTGAATGAG...ATGGTTAAACTGATACCAAGGATAGGTAAGGGAAATTCCAAATTCCATTGGAAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CCA 90 bp TATATGTACAAAAAGGGCTCATGTAGGATGATGTTCCTTTCAGCATTGTTTGTATCCCTTACCTATCCTTaGTATCAGTTTAACCATCTA +
Preference number: 4 (lower is better)
Translates to: YMYKKGSCRMMFLSALFVSLTYP*YQFNHL
Trigger: TAGATGGTTAAACTGATACCAAGGATAGGTAAGGGA...TACAAACAATGCTGAAAGGAACATCATCCTACATGAGCCCTTTTTGTACATATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR GCA 90 bp TATATGTACAAAAAGGGCTCATGTAGGATGATGTTCCTTTCAGCATTGTTTGTAAATTGCTGTAGAGTGTaGATTTCTCATTTGGTTGAT +
Preference number: 4 (lower is better)
Translates to: YMYKKGSCRMMFLSALFVNCCRV*ISHLVD
Trigger: ATCAACCAAATGAGAAATGCACACTCTACAGCAATT...TACAAACAATGCTGAAAGGAACATCATCCTACATGAGCCCTTTTTGTACATATA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS TCA 90 bp CAAGGCCCGGAACCCCGCAAAAAGCGCGCTGGCCGTGCGCCTTTCTaGGGCCCGTTCCATTGCCGCCGCGATCCCAGCTCCTCTCAGCTC +
Preference number: 5 (lower is better)
Translates to: QGPEPRKKRAGRAPF*GPFHCRRDPSSSQL
Trigger: GAGCTGAGAGGAGCTGGGATCGCGGCGGCAATGGAACGGGCCTCAGAAAGGCGCACGGCCAGCGCGCTTTTTGCGGGGTTCCGGGCCTTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000505303.5
ENST00000506538.6
ENST00000513710.4
ENST00000515784.1
ENST00000612402.4
CDS GCA 90 bp CCCAGTCCCTTCAGCGTGTCTAGTGGAACAGTCCTCTGCCAGAGCTaGAGACACAACACCGCTTCCGGCGCCCGCTGCGAATCGCGTTTC +
Preference number: 5 (lower is better)
Translates to: PSPFSVSSGTVLCQS*RHNTASGARCESRF
Trigger: GAAACGCGATTCGCAGCGGGCGCCGGAAGCGGTGTTGTGTCTGCAGCTCTGGCAGAGGACTGTTCCACTAGACACGCTGAAGGGACTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506538.6
ENST00000612402.4
CDS GCA 90 bp GTCCTCTGCCAGAGCTGCAGACACAACACCGCTTCCGGCGCCCGCTaGGAATCGCGTTTCCGGAGACTGCCCTCAGTGCAACACATAAAG +
Preference number: 5 (lower is better)
Translates to: VLCQSCRHNTASGAR*ESRFRRLPSVQHIK
Trigger: CTTTATGTGTTGCACTGAGGGCAGTCTCCGGAAACGCGATTCGCAGCGGGCGCCGGAAGCGGTGTTGTGTCTGCAGCTCTGGCAGAGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506538.6
ENST00000612402.4
CDS CCA 90 bp CCGCAAGGGCGGGAAACAAAGAGGGAAGCGCGACGCCCAGGAGAATaGAGGGGAGGTCGACGCCTTGGAGATGGAAACGATTTAAACATG +
Preference number: 5 (lower is better)
Translates to: PQGRETKREARRPGE*RGGRRLGDGNDLNM
Trigger: CATGTTTAAATCGTTTCCATCTCCAAGGCGTCGACCTCCCCTCCATTCTCCTGGGCGTCGCGCTTCCCTCTTTGTTTCCCGCCCTTGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506538.6
CDS CCA 90 bp TGTTACATAGAACCGGCGCTTGAGCGCGCTGAACCGCACCACGTGTaGAATGTCGTTGCTGAAAAGTCCCAAGGCCCGGAACCCCGCAAA +
Preference number: 5 (lower is better)
Translates to: CYIEPALERAEPHHV*NVVAEKSQGPEPRK
Trigger: TTTGCGGGGTTCCGGGCCTTGGGACTTTTCAGCAACGACATTCCACACGTGGTGCGGTTCAGCGCGCTCAAGCGCCGGTTCTATGTAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000505303.5
ENST00000506538.6
ENST00000513710.4
ENST00000515784.1
ENST00000612402.4
CDS TCA 90 bp AGTGCAACACATAAAGTTCTCCCTCCAGAGCTCACATGGGAGGCGTaGCTTGGGTTCCGAGGGCCAAGGTCTCCAGCACGTTGCCTAGCA +
Preference number: 5 (lower is better)
Translates to: SATHKVLPPELTWEA*LGFRGPRSPARCLA
Trigger: TGCTAGGCAACGTGCTGGAGACCTTGGCCCTCGGAACCCAAGTCACGCCTCCCATGTGAGCTCTGGAGGGAGAACTTTATGTGTTGCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506538.6
ENST00000612402.4
CDS-3UTR CAA 90 bp AAGCATATACCACAGAGAGAGCCTTATATGTACAAAAAGGGCTCATGTAGGATGCTGAGGCCCGTTCCATaGCCGCCGCGATCCCAGCTC +
Preference number: 5 (lower is better)
Translates to: KHIPQREPYMYKKGSCRMLRPVP*PPRSQL
Trigger: GAGCTGGGATCGCGGCGGCAATGGAACGGGCCTCAG...CATCCTACATGAGCCCTTTTTGTACATATAAGGCTCTCTCTGTGGTATATGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CAA 90 bp CTAACAACGAACGAGAATGCTACTGGTGTTCATATTCAAACCACTGTGTTTCATCTGAGGCCCGTTCCATaGCCGCCGCGATCCCAGCTC +
Preference number: 5 (lower is better)
Translates to: LTTNENATGVHIQTTVFHLRPVP*PPRSQL
Trigger: GAGCTGGGATCGCGGCGGCAATGGAACGGGCCTCAG...ATGAAACACAGTGGTTTGAATATGAACACCAGTAGCATTCTCGTTCGTTGTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CAA 90 bp CTTCCAATGGAATTTGGAATTTCCCTTACCTATCCTTGGTATCAGTTTAACCATCTGAGGCCCGTTCCATaGCCGCCGCGATCCCAGCTC +
Preference number: 5 (lower is better)
Translates to: LPMEFGISLTYPWYQFNHLRPVP*PPRSQL
Trigger: GAGCTGGGATCGCGGCGGCAATGGAACGGGCCTCAG...ATGGTTAAACTGATACCAAGGATAGGTAAGGGAAATTCCAAATTCCATTGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CAA 90 bp AAGCATATACCACAGAGAGAGCCTTATATGTACAAAAAGGGCTCATGTAGGATGCTACAGCGACTTGCCTaGGGCAAGGAAGGGCCTCCC +
Preference number: 5 (lower is better)
Translates to: KHIPQREPYMYKKGSCRMLQRLA*GKEGPP
Trigger: GGGAGGCCCTTCCTTGCCCAAGGCAAGTCGCTGTAG...CATCCTACATGAGCCCTTTTTGTACATATAAGGCTCTCTCTGTGGTATATGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CAA 90 bp CTAACAACGAACGAGAATGCTACTGGTGTTCATATTCAAACCACTGTGTTTCATCATGGGAGGCGTGACTaGGGTTCCGAGGGCCAAGGT +
Preference number: 5 (lower is better)
Translates to: LTTNENATGVHIQTTVFHHGRRD*GSEGQG
Trigger: ACCTTGGCCCTCGGAACCCAAGTCACGCCTCCCATG...ATGAAACACAGTGGTTTGAATATGAACACCAGTAGCATTCTCGTTCGTTGTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506538.6
ENST00000612402.4
CDS CCA 90 bp ATGGGACATTTCAAAACTGACAGAGGGATTCACTCACAGACCCTCTaGGGAGTAGAACTAATTACTTGTGGGGAGGGAACTGCTCACTTG +
Preference number: 5 (lower is better)
Translates to: MGHFKTDRGIHSQTL*GVELITCGEGTAHL
Trigger: CAAGTGAGCAGTTCCCTCCCCACAAGTAATTAGTTCTACTCCCCAGAGGGTCTGTGAGTGAATCCCTCTGTCAGTTTTGAAATGTCCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506538.6
CDS-3UTR CAA 90 bp CAAATAAAACATATGGTATTTGAGGGATGCAAAACCCTCAAATACAAGGACCGACATGGGAGGCGTGACTaGGGTTCCGAGGGCCAAGGT +
Preference number: 5 (lower is better)
Translates to: QIKHMVFEGCKTLKYKDRHGRRD*GSEGQG
Trigger: ACCTTGGCCCTCGGAACCCAAGTCACGCCTCCCATG...TCGGTCCTTGTATTTGAGGGTTTTGCATCCCTCAAATACCATATGTTTTATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506538.6
ENST00000612402.4
CDS GCA 90 bp TCACGCTTTCTGTCCAGCATCATCCCAATCATTTTCAAGAAGCTCTaGATAACTTCTATGGACCCACCACAATCAGGAGACAAGCTTCGC +
Preference number: 5 (lower is better)
Translates to: SRFLSSIIPIIFKKL*ITSMDPPQSGDKLR
Trigger: GCGAAGCTTGTCTCCTGATTGTGGTGGGTCCATAGAAGTTATGCAGAGCTTCTTGAAAATGATTGGGATGATGCTGGACAGAAAGCGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS CCA 90 bp CTAAGAGCATTGTCAGCGCCATTTGTGACAAGAAGTGGCTCTCTATaGAGAAATGTCAGTCCGGCAATTGCTGTAGAGTGTGCATTTCTC +
Preference number: 5 (lower is better)
Translates to: LRALSAPFVTRSGSL*RNVSPAIAVECAFL
Trigger: GAGAAATGCACACTCTACAGCAATTGCCGGACTGACATTTCTCCATAGAGAGCCACTTCTTGTCACAAATGGCGCTGACAATGCTCTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000505303.5
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CAA 90 bp GGGCTACCTGGGTTTGCAATGGTTGTGAAAGAAAAGTATACTCAGCATTTTCTTTCTTGCCCACGCAGGTaGTTACATAGAACCGGCGCT +
Preference number: 5 (lower is better)
Translates to: GLPGFAMVVKEKYTQHFLSCPRR*LHRTGA
Trigger: AGCGCCGGTTCTATGTAACAACCTGCGTGGGCAAGA...AAGAAAATGCTGAGTATACTTTTCTTTCACAACCATTGCAAACCCAGGTAGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS TCA 90 bp GATAATTCCAGGTTGAGCAAGATAGCTTACCTTGATGGCAAGCAATaGTACCATCCCAGTCACTTTCACGAGCTTCCTCTGCTGCAAACT +
Preference number: 5 (lower is better)
Translates to: DNSRLSKIAYLDGKQ*YHPSHFHELPLLQT
Trigger: AGTTTGCAGCAGAGGAAGCTCGTGAAAGTGACTGGGATGGTATCATTGCTTGCCATCAAGGTAAGCTATCTTGCTCAACCTGGAATTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000505303.5
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS TCA 90 bp GTTCAGGTGCAGCATATCTGGGTACAAGGCCAGGAATTGTTGGAATaGAAAATGGTGCTGATTTGGGTACTTTGGGTGGTTCCTTTGGTT +
Preference number: 5 (lower is better)
Translates to: VQVQHIWVQGQELLE*KMVLIWVLWVVPLV
Trigger: AACCAAAGGAACCACCCAAAGTACCCAAATCAGCACCATTTTTCATTCCAACAATTCCTGGCCTTGTACCCAGATATGCTGCACCTGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS GCA 90 bp CAGATCCCTTGTGAGCTTGATCCTTGCCAAAACTTCCTCGATGTATaGCAGACTGCATGTTATATACATCTACAGTTCCTGATGAGAGGC +
Preference number: 5 (lower is better)
Translates to: QIPCELDPCQNFLDV*QTACYIHLQFLMRG
Trigger: GCCTCTCATCAGGAACTGTAGATGTATATAACATGCAGTCTGGCATACATCGAGGAAGTTTTGGCAAGGATCAAGCTCACAAGGGATCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000505303.5
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS CCA 90 bp TATCCATATCCTAAGAGCATTGTCAGCGCCATTTGTGACAAGAAGTaGCTCTCTATGGAGAAATGTCAGTCCGGCAATTGCTGTAGAGTG +
Preference number: 5 (lower is better)
Translates to: YPYPKSIVSAICDKK*LSMEKCQSGNCCRV
Trigger: CACTCTACAGCAATTGCCGGACTGACATTTCTCCATAGAGAGCCACTTCTTGTCACAAATGGCGCTGACAATGCTCTTAGGATATGGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000505303.5
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CAA 90 bp GGGCTACCTGGGTTTGCAATGGTTGTGAAAGAAAAGTATACTCAGCATTTTCTTTGTTCTCCAGCTCTTTaGCGGTGGAAGGAAGCTCGT +
Preference number: 5 (lower is better)
Translates to: GLPGFAMVVKEKYTQHFLCSPAL*RWKEAR
Trigger: ACGAGCTTCCTTCCACCGCAAAAGAGCTGGAGAACA...AAGAAAATGCTGAGTATACTTTTCTTTCACAACCATTGCAAACCCAGGTAGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506538.6
ENST00000612402.4
CDS-3UTR CAA 90 bp CTAACAACGAACGAGAATGCTACTGGTGTTCATATTCAAACCACTGTGTTTCATTCTTGCCCACGCAGGTaGTTACATAGAACCGGCGCT +
Preference number: 5 (lower is better)
Translates to: LTTNENATGVHIQTTVFHSCPRR*LHRTGA
Trigger: AGCGCCGGTTCTATGTAACAACCTGCGTGGGCAAGA...ATGAAACACAGTGGTTTGAATATGAACACCAGTAGCATTCTCGTTCGTTGTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CAA 90 bp CAAATAAAACATATGGTATTTGAGGGATGCAAAACCCTCAAATACAAGGACCGAACCATCTACAGCGACTaGCCTTGGGCAAGGAAGGGC +
Preference number: 5 (lower is better)
Translates to: QIKHMVFEGCKTLKYKDRTIYSD*PWARKG
Trigger: GCCCTTCCTTGCCCAAGGCAAGTCGCTGTAGATGGT...TCGGTCCTTGTATTTGAGGGTTTTGCATCCCTCAAATACCATATGTTTTATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CAA 90 bp GGGCTACCTGGGTTTGCAATGGTTGTGAAAGAAAAGTATACTCAGCATTTTCTTGGACTGCACTCGGTATaGTCGGTCTCTCCAAATCAG +
Preference number: 5 (lower is better)
Translates to: GLPGFAMVVKEKYTQHFLGLHSV*SVSPNQ
Trigger: CTGATTTGGAGAGACCGACAATACCGAGTGCAGTCC...AAGAAAATGCTGAGTATACTTTTCTTTCACAACCATTGCAAACCCAGGTAGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CAA 90 bp GGGCTACCTGGGTTTGCAATGGTTGTGAAAGAAAAGTATACTCAGCATTTTCTTGGCATTGCTTGGATTTaGGTATCCACAGGGGTCCTG +
Preference number: 5 (lower is better)
Translates to: GLPGFAMVVKEKYTQHFLGIAWI*VSTGVL
Trigger: CAGGACCCCTGTGGATACCAAAATCCAAGCAATGCC...AAGAAAATGCTGAGTATACTTTTCTTTCACAACCATTGCAAACCCAGGTAGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CAA 90 bp AAGCATATACCACAGAGAGAGCCTTATATGTACAAAAAGGGCTCATGTAGGATGGGCATTGCTTGGATTTaGGTATCCACAGGGGTCCTG +
Preference number: 5 (lower is better)
Translates to: KHIPQREPYMYKKGSCRMGIAWI*VSTGVL
Trigger: CAGGACCCCTGTGGATACCAAAATCCAAGCAATGCC...CATCCTACATGAGCCCTTTTTGTACATATAAGGCTCTCTCTGTGGTATATGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CAA 90 bp CTAACAACGAACGAGAATGCTACTGGTGTTCATATTCAAACCACTGTGTTTCATAAGGTCTCCAGCACGTaGCCTAGCATTGTTCTCCAG +
Preference number: 5 (lower is better)
Translates to: LTTNENATGVHIQTTVFHKVSST*PSIVLQ
Trigger: CTGGAGAACAATGCTAGGCAACGTGCTGGAGACCTT...ATGAAACACAGTGGTTTGAATATGAACACCAGTAGCATTCTCGTTCGTTGTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506538.6
ENST00000612402.4
CDS-3UTR CAA 90 bp CTAACAACGAACGAGAATGCTACTGGTGTTCATATTCAAACCACTGTGTTTCATACGTGTGGAATGTCGTaGCTGAAAAGTCCCAAGGCC +
Preference number: 5 (lower is better)
Translates to: LTTNENATGVHIQTTVFHTCGMS*LKSPKA
Trigger: GGCCTTGGGACTTTTCAGCAACGACATTCCACACGT...ATGAAACACAGTGGTTTGAATATGAACACCAGTAGCATTCTCGTTCGTTGTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CAA 90 bp CTTCCAATGGAATTTGGAATTTCCCTTACCTATCCTTGGTATCAGTTTAACCATTCTTGCCCACGCAGGTaGTTACATAGAACCGGCGCT +
Preference number: 5 (lower is better)
Translates to: LPMEFGISLTYPWYQFNHSCPRR*LHRTGA
Trigger: AGCGCCGGTTCTATGTAACAACCTGCGTGGGCAAGA...ATGGTTAAACTGATACCAAGGATAGGTAAGGGAAATTCCAAATTCCATTGGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CAA 90 bp AAGCATATACCACAGAGAGAGCCTTATATGTACAAAAAGGGCTCATGTAGGATGGGAGACATAGAAACATaGAGAGGAGCCGAGTCCAAC +
Preference number: 5 (lower is better)
Translates to: KHIPQREPYMYKKGSCRMGDIET*RGAESN
Trigger: GTTGGACTCGGCTCCTCTCAATGTTTCTATGTCTCC...CATCCTACATGAGCCCTTTTTGTACATATAAGGCTCTCTCTGTGGTATATGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CAA 90 bp AAGCATATACCACAGAGAGAGCCTTATATGTACAAAAAGGGCTCATGTAGGATGTCTGCAGGGCATTGCTaGGATTTTGGTATCCACAGG +
Preference number: 5 (lower is better)
Translates to: KHIPQREPYMYKKGSCRMSAGHC*DFGIHR
Trigger: CCTGTGGATACCAAAATCCAAGCAATGCCCTGCAGA...CATCCTACATGAGCCCTTTTTGTACATATAAGGCTCTCTCTGTGGTATATGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CAA 90 bp CTTCCAATGGAATTTGGAATTTCCCTTACCTATCCTTGGTATCAGTTTAACCATTGTTCTCCAGCTCTTTaGCGGTGGAAGGAAGCTCGT +
Preference number: 5 (lower is better)
Translates to: LPMEFGISLTYPWYQFNHCSPAL*RWKEAR
Trigger: ACGAGCTTCCTTCCACCGCAAAAGAGCTGGAGAACA...ATGGTTAAACTGATACCAAGGATAGGTAAGGGAAATTCCAAATTCCATTGGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506538.6
ENST00000612402.4
CDS-3UTR CAA 90 bp CTAACAACGAACGAGAATGCTACTGGTGTTCATATTCAAACCACTGTGTTTCATCAACTGCAGGCTTCCTaGTTCACTGCCCAGAAGTAT +
Preference number: 5 (lower is better)
Translates to: LTTNENATGVHIQTTVFHQLQAS*FTAQKY
Trigger: ATACTTCTGGGCAGTGAACAAGGAAGCCTGCAGTTG...ATGAAACACAGTGGTTTGAATATGAACACCAGTAGCATTCTCGTTCGTTGTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CAA 90 bp GGGCTACCTGGGTTTGCAATGGTTGTGAAAGAAAAGTATACTCAGCATTTTCTTAGATCCCTTGTGAGCTaGATCCTTGCCAAAACTTCC +
Preference number: 5 (lower is better)
Translates to: GLPGFAMVVKEKYTQHFLRSLVS*ILAKTS
Trigger: GGAAGTTTTGGCAAGGATCAAGCTCACAAGGGATCT...AAGAAAATGCTGAGTATACTTTTCTTTCACAACCATTGCAAACCCAGGTAGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CAA 90 bp AAGCATATACCACAGAGAGAGCCTTATATGTACAAAAAGGGCTCATGTAGGATGCAGGGGAACTGTAACTaGATACAGCCATTCTGGAAC +
Preference number: 5 (lower is better)
Translates to: KHIPQREPYMYKKGSCRMQGNCN*IQPFWN
Trigger: GTTCCAGAATGGCTGTATCAAGTTACAGTTCCCCTG...CATCCTACATGAGCCCTTTTTGTACATATAAGGCTCTCTCTGTGGTATATGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CAA 90 bp AAGCATATACCACAGAGAGAGCCTTATATGTACAAAAAGGGCTCATGTAGGATGGCAGATGCTCATATCTaGCTCAGGGGAACTGTAACT +
Preference number: 5 (lower is better)
Translates to: KHIPQREPYMYKKGSCRMADAHI*LRGTVT
Trigger: AGTTACAGTTCCCCTGAGCAAGATATGAGCATCTGC...CATCCTACATGAGCCCTTTTTGTACATATAAGGCTCTCTCTGTGGTATATGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CAA 90 bp CAAATAAAACATATGGTATTTGAGGGATGCAAAACCCTCAAATACAAGGACCGAGGACTGCACTCGGTATaGTCGGTCTCTCCAAATCAG +
Preference number: 5 (lower is better)
Translates to: QIKHMVFEGCKTLKYKDRGLHSV*SVSPNQ
Trigger: CTGATTTGGAGAGACCGACAATACCGAGTGCAGTCC...TCGGTCCTTGTATTTGAGGGTTTTGCATCCCTCAAATACCATATGTTTTATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CAA 90 bp CTTCCAATGGAATTTGGAATTTCCCTTACCTATCCTTGGTATCAGTTTAACCATGGACTGCACTCGGTATaGTCGGTCTCTCCAAATCAG +
Preference number: 5 (lower is better)
Translates to: LPMEFGISLTYPWYQFNHGLHSV*SVSPNQ
Trigger: CTGATTTGGAGAGACCGACAATACCGAGTGCAGTCC...ATGGTTAAACTGATACCAAGGATAGGTAAGGGAAATTCCAAATTCCATTGGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS TCA 90 bp CTTCTGATACTTCTACATCTTGGGTTTGACAAGTACCAGGAAGCATaGCTATTGAAGGGACATAATCTGCAGGAAGTGGCCGTAATGAAA +
Preference number: 5 (lower is better)
Translates to: LLILLHLGFDKYQEA*LLKGHNLQEVAVMK
Trigger: TTTCATTACGGCCACTTCCTGCAGATTATGTCCCTTCAATAGTCATGCTTCCTGGTACTTGTCAAACCCAAGATGTAGAAGTATCAGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CAA 90 bp CAAATAAAACATATGGTATTTGAGGGATGCAAAACCCTCAAATACAAGGACCGAGAGGGAACTGCTCACTaGGGCAACTTGGATAAGTGT +
Preference number: 5 (lower is better)
Translates to: QIKHMVFEGCKTLKYKDREGTAH*GNLDKC
Trigger: ACACTTATCCAAGTTGCCCAAGTGAGCAGTTCCCTC...TCGGTCCTTGTATTTGAGGGTTTTGCATCCCTCAAATACCATATGTTTTATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506538.6
CDS-3UTR CAA 90 bp TATATGTACAAAAAGGGCTCATGTAGGATGATGTTCCTTTCAGCATTGTTTGTAACGTGTGGAATGTCGTaGCTGAAAAGTCCCAAGGCC +
Preference number: 5 (lower is better)
Translates to: YMYKKGSCRMMFLSALFVTCGMS*LKSPKA
Trigger: GGCCTTGGGACTTTTCAGCAACGACATTCCACACGT...TACAAACAATGCTGAAAGGAACATCATCCTACATGAGCCCTTTTTGTACATATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CAA 90 bp CTTCCAATGGAATTTGGAATTTCCCTTACCTATCCTTGGTATCAGTTTAACCATCAACTGCAGGCTTCCTaGTTCACTGCCCAGAAGTAT +
Preference number: 5 (lower is better)
Translates to: LPMEFGISLTYPWYQFNHQLQAS*FTAQKY
Trigger: ATACTTCTGGGCAGTGAACAAGGAAGCCTGCAGTTG...ATGGTTAAACTGATACCAAGGATAGGTAAGGGAAATTCCAAATTCCATTGGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CAA 90 bp AAGCATATACCACAGAGAGAGCCTTATATGTACAAAAAGGGCTCATGTAGGATGCATATCCTAAGAGCATaGTCAGCGCCATTTGTGACA +
Preference number: 5 (lower is better)
Translates to: KHIPQREPYMYKKGSCRMHILRA*SAPFVT
Trigger: TGTCACAAATGGCGCTGACAATGCTCTTAGGATATG...CATCCTACATGAGCCCTTTTTGTACATATAAGGCTCTCTCTGTGGTATATGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CAA 90 bp GGGCTACCTGGGTTTGCAATGGTTGTGAAAGAAAAGTATACTCAGCATTTTCTTGAGTTCCATCTTGACTaGCACTTAGAATCTGCTGTC +
Preference number: 5 (lower is better)
Translates to: GLPGFAMVVKEKYTQHFLEFHLD*HLESAV
Trigger: GACAGCAGATTCTAAGTGCAAGTCAAGATGGAACTC...AAGAAAATGCTGAGTATACTTTTCTTTCACAACCATTGCAAACCCAGGTAGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CAA 90 bp CAAATAAAACATATGGTATTTGAGGGATGCAAAACCCTCAAATACAAGGACCGAGGAGACATAGAAACATaGAGAGGAGCCGAGTCCAAC +
Preference number: 5 (lower is better)
Translates to: QIKHMVFEGCKTLKYKDRGDIET*RGAESN
Trigger: GTTGGACTCGGCTCCTCTCAATGTTTCTATGTCTCC...TCGGTCCTTGTATTTGAGGGTTTTGCATCCCTCAAATACCATATGTTTTATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CAA 90 bp CTAACAACGAACGAGAATGCTACTGGTGTTCATATTCAAACCACTGTGTTTCATCAGGGGAACTGTAACTaGATACAGCCATTCTGGAAC +
Preference number: 5 (lower is better)
Translates to: LTTNENATGVHIQTTVFHQGNCN*IQPFWN
Trigger: GTTCCAGAATGGCTGTATCAAGTTACAGTTCCCCTG...ATGAAACACAGTGGTTTGAATATGAACACCAGTAGCATTCTCGTTCGTTGTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS TCA 90 bp ACGAGCTTCCTCTGCTGCAAACTTTGTGATGGGTGGAAGTCTCACTaGCATGGTATTCTGAAGTCCTTTACGTTTAACTCTCTTTTTATT +
Preference number: 5 (lower is better)
Translates to: TSFLCCKLCDGWKSH*HGILKSFTFNSLFI
Trigger: AATAAAAAGAGAGTTAAACGTAAAGGACTTCAGAATACCATGTCAGTGAGACTTCCACCCATCACAAAGTTTGCAGCAGAGGAAGCTCGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000505303.5
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CAA 90 bp CTAACAACGAACGAGAATGCTACTGGTGTTCATATTCAAACCACTGTGTTTCATAGTAGAACTAATTACTaGTGGGGAGGGAACTGCTCA +
Preference number: 5 (lower is better)
Translates to: LTTNENATGVHIQTTVFHSRTNY*WGGNCS
Trigger: TGAGCAGTTCCCTCCCCACAAGTAATTAGTTCTACT...ATGAAACACAGTGGTTTGAATATGAACACCAGTAGCATTCTCGTTCGTTGTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506538.6
CDS-3UTR CAA 90 bp CAAATAAAACATATGGTATTTGAGGGATGCAAAACCCTCAAATACAAGGACCGAGTGGTCTCCAAAGGGTaGCAAGAAATGGATTTCTGC +
Preference number: 5 (lower is better)
Translates to: QIKHMVFEGCKTLKYKDRVVSKG*QEMDFC
Trigger: GCAGAAATCCATTTCTTGCAACCCTTTGGAGACCAC...TCGGTCCTTGTATTTGAGGGTTTTGCATCCCTCAAATACCATATGTTTTATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CAA 90 bp TATATGTACAAAAAGGGCTCATGTAGGATGATGTTCCTTTCAGCATTGTTTGTACAACTGCAGGCTTCCTaGTTCACTGCCCAGAAGTAT +
Preference number: 5 (lower is better)
Translates to: YMYKKGSCRMMFLSALFVQLQAS*FTAQKY
Trigger: ATACTTCTGGGCAGTGAACAAGGAAGCCTGCAGTTG...TACAAACAATGCTGAAAGGAACATCATCCTACATGAGCCCTTTTTGTACATATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CAA 90 bp CTTCCAATGGAATTTGGAATTTCCCTTACCTATCCTTGGTATCAGTTTAACCATAGATCCCTTGTGAGCTaGATCCTTGCCAAAACTTCC +
Preference number: 5 (lower is better)
Translates to: LPMEFGISLTYPWYQFNHRSLVS*ILAKTS
Trigger: GGAAGTTTTGGCAAGGATCAAGCTCACAAGGGATCT...ATGGTTAAACTGATACCAAGGATAGGTAAGGGAAATTCCAAATTCCATTGGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CAA 90 bp CAAATAAAACATATGGTATTTGAGGGATGCAAAACCCTCAAATACAAGGACCGAAGATCCCTTGTGAGCTaGATCCTTGCCAAAACTTCC +
Preference number: 5 (lower is better)
Translates to: QIKHMVFEGCKTLKYKDRRSLVS*ILAKTS
Trigger: GGAAGTTTTGGCAAGGATCAAGCTCACAAGGGATCT...TCGGTCCTTGTATTTGAGGGTTTTGCATCCCTCAAATACCATATGTTTTATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CAA 90 bp TATATGTACAAAAAGGGCTCATGTAGGATGATGTTCCTTTCAGCATTGTTTGTAGGAGACATAGAAACATaGAGAGGAGCCGAGTCCAAC +
Preference number: 5 (lower is better)
Translates to: YMYKKGSCRMMFLSALFVGDIET*RGAESN
Trigger: GTTGGACTCGGCTCCTCTCAATGTTTCTATGTCTCC...TACAAACAATGCTGAAAGGAACATCATCCTACATGAGCCCTTTTTGTACATATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CAA 90 bp AAGCATATACCACAGAGAGAGCCTTATATGTACAAAAAGGGCTCATGTAGGATGTTCTACATCTTGGGTTaGACAAGTACCAGGAAGCAT +
Preference number: 5 (lower is better)
Translates to: KHIPQREPYMYKKGSCRMFYILG*TSTRKH
Trigger: ATGCTTCCTGGTACTTGTCAAACCCAAGATGTAGAA...CATCCTACATGAGCCCTTTTTGTACATATAAGGCTCTCTCTGTGGTATATGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CAA 90 bp CTAACAACGAACGAGAATGCTACTGGTGTTCATATTCAAACCACTGTGTTTCATAAAAATGGTGCTGATTaGGGTACTTTGGGTGGTTCC +
Preference number: 5 (lower is better)
Translates to: LTTNENATGVHIQTTVFHKNGAD*GTLGGS
Trigger: GGAACCACCCAAAGTACCCAAATCAGCACCATTTTT...ATGAAACACAGTGGTTTGAATATGAACACCAGTAGCATTCTCGTTCGTTGTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CAA 90 bp AAGCATATACCACAGAGAGAGCCTTATATGTACAAAAAGGGCTCATGTAGGATGATAGGCAAAGTACTGTaGGACAGTGCACAAGAGATT +
Preference number: 5 (lower is better)
Translates to: KHIPQREPYMYKKGSCRMIGKVL*DSAQEI
Trigger: AATCTCTTGTGCACTGTCCAACAGTACTTTGCCTAT...CATCCTACATGAGCCCTTTTTGTACATATAAGGCTCTCTCTGTGGTATATGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CAA 90 bp CTTCCAATGGAATTTGGAATTTCCCTTACCTATCCTTGGTATCAGTTTAACCATGCAGATGCTCATATCTaGCTCAGGGGAACTGTAACT +
Preference number: 5 (lower is better)
Translates to: LPMEFGISLTYPWYQFNHADAHI*LRGTVT
Trigger: AGTTACAGTTCCCCTGAGCAAGATATGAGCATCTGC...ATGGTTAAACTGATACCAAGGATAGGTAAGGGAAATTCCAAATTCCATTGGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CAA 90 bp TATATGTACAAAAAGGGCTCATGTAGGATGATGTTCCTTTCAGCATTGTTTGTATCTGCAGGGCATTGCTaGGATTTTGGTATCCACAGG +
Preference number: 5 (lower is better)
Translates to: YMYKKGSCRMMFLSALFVSAGHC*DFGIHR
Trigger: CCTGTGGATACCAAAATCCAAGCAATGCCCTGCAGA...TACAAACAATGCTGAAAGGAACATCATCCTACATGAGCCCTTTTTGTACATATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS GCA 90 bp AAGATTTACCACTTTAGACTGCTGGGGATCATTATTTTGTTCAGGTaGAGCATATCTGGGTACAAGGCCAGGAATTGTTGGAATGAAAAA +
Preference number: 5 (lower is better)
Translates to: KIYHFRLLGIIILFR*SISGYKARNCWNEK
Trigger: TTTTTCATTCCAACAATTCCTGGCCTTGTACCCAGATATGCTGCACCTGAACAAAATAATGATCCCCAGCAGTCTAAAGTGGTAAATCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CAA 90 bp TATATGTACAAAAAGGGCTCATGTAGGATGATGTTCCTTTCAGCATTGTTTGTAGTGGTCTCCAAAGGGTaGCAAGAAATGGATTTCTGC +
Preference number: 5 (lower is better)
Translates to: YMYKKGSCRMMFLSALFVVVSKG*QEMDFC
Trigger: GCAGAAATCCATTTCTTGCAACCCTTTGGAGACCAC...TACAAACAATGCTGAAAGGAACATCATCCTACATGAGCCCTTTTTGTACATATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CAA 90 bp CAAATAAAACATATGGTATTTGAGGGATGCAAAACCCTCAAATACAAGGACCGACATATCCTAAGAGCATaGTCAGCGCCATTTGTGACA +
Preference number: 5 (lower is better)
Translates to: QIKHMVFEGCKTLKYKDRHILRA*SAPFVT
Trigger: TGTCACAAATGGCGCTGACAATGCTCTTAGGATATG...TCGGTCCTTGTATTTGAGGGTTTTGCATCCCTCAAATACCATATGTTTTATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CAA 90 bp CTTCCAATGGAATTTGGAATTTCCCTTACCTATCCTTGGTATCAGTTTAACCATCATATCCTAAGAGCATaGTCAGCGCCATTTGTGACA +
Preference number: 5 (lower is better)
Translates to: LPMEFGISLTYPWYQFNHHILRA*SAPFVT
Trigger: TGTCACAAATGGCGCTGACAATGCTCTTAGGATATG...ATGGTTAAACTGATACCAAGGATAGGTAAGGGAAATTCCAAATTCCATTGGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CAA 90 bp CAAATAAAACATATGGTATTTGAGGGATGCAAAACCCTCAAATACAAGGACCGAGAGTTCCATCTTGACTaGCACTTAGAATCTGCTGTC +
Preference number: 5 (lower is better)
Translates to: QIKHMVFEGCKTLKYKDREFHLD*HLESAV
Trigger: GACAGCAGATTCTAAGTGCAAGTCAAGATGGAACTC...TCGGTCCTTGTATTTGAGGGTTTTGCATCCCTCAAATACCATATGTTTTATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CAA 90 bp AAGCATATACCACAGAGAGAGCCTTATATGTACAAAAAGGGCTCATGTAGGATGTGTCCCAAGCTCTTATaGAATTTTTCATGTACCGTG +
Preference number: 5 (lower is better)
Translates to: KHIPQREPYMYKKGSCRMCPKLL*NFSCTV
Trigger: CACGGTACATGAAAAATTCAATAAGAGCTTGGGACA...CATCCTACATGAGCCCTTTTTGTACATATAAGGCTCTCTCTGTGGTATATGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CAA 90 bp CAAATAAAACATATGGTATTTGAGGGATGCAAAACCCTCAAATACAAGGACCGAGCTGATTTGGGTACTTaGGGTGGTTCCTTTGGTTTA +
Preference number: 5 (lower is better)
Translates to: QIKHMVFEGCKTLKYKDRADLGT*GGSFGL
Trigger: TAAACCAAAGGAACCACCCAAAGTACCCAAATCAGC...TCGGTCCTTGTATTTGAGGGTTTTGCATCCCTCAAATACCATATGTTTTATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CAA 90 bp CAAATAAAACATATGGTATTTGAGGGATGCAAAACCCTCAAATACAAGGACCGAAAAAATGGTGCTGATTaGGGTACTTTGGGTGGTTCC +
Preference number: 5 (lower is better)
Translates to: QIKHMVFEGCKTLKYKDRKNGAD*GTLGGS
Trigger: GGAACCACCCAAAGTACCCAAATCAGCACCATTTTT...TCGGTCCTTGTATTTGAGGGTTTTGCATCCCTCAAATACCATATGTTTTATTTG
40% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CAA 90 bp AAGCATATACCACAGAGAGAGCCTTATATGTACAAAAAGGGCTCATGTAGGATGGATTCTTTCAGAAGGTaGAGAGCAGTGTCATACTTA +
Preference number: 5 (lower is better)
Translates to: KHIPQREPYMYKKGSCRMDSFRR*RAVSYL
Trigger: TAAGTATGACACTGCTCTCAACCTTCTGAAAGAATC...CATCCTACATGAGCCCTTTTTGTACATATAAGGCTCTCTCTGTGGTATATGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CAA 90 bp CTAACAACGAACGAGAATGCTACTGGTGTTCATATTCAAACCACTGTGTTTCATATAGGCAAAGTACTGTaGGACAGTGCACAAGAGATT +
Preference number: 5 (lower is better)
Translates to: LTTNENATGVHIQTTVFHIGKVL*DSAQEI
Trigger: AATCTCTTGTGCACTGTCCAACAGTACTTTGCCTAT...ATGAAACACAGTGGTTTGAATATGAACACCAGTAGCATTCTCGTTCGTTGTTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CAA 90 bp TATATGTACAAAAAGGGCTCATGTAGGATGATGTTCCTTTCAGCATTGTTTGTACAGGGGAACTGTAACTaGATACAGCCATTCTGGAAC +
Preference number: 5 (lower is better)
Translates to: YMYKKGSCRMMFLSALFVQGNCN*IQPFWN
Trigger: GTTCCAGAATGGCTGTATCAAGTTACAGTTCCCCTG...TACAAACAATGCTGAAAGGAACATCATCCTACATGAGCCCTTTTTGTACATATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CAA 90 bp GGGCTACCTGGGTTTGCAATGGTTGTGAAAGAAAAGTATACTCAGCATTTTCTTAATTTTGAACAGATATaGGAAGCAGCGCTGTTTCAC +
Preference number: 5 (lower is better)
Translates to: GLPGFAMVVKEKYTQHFLNFEQI*EAALFH
Trigger: GTGAAACAGCGCTGCTTCCAATATCTGTTCAAAATT...AAGAAAATGCTGAGTATACTTTTCTTTCACAACCATTGCAAACCCAGGTAGCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS TCA 90 bp ATAATGTGGTCTCCAAAGGGTTGCAAGAAATGGATTTCTGCCTTATaGCCCTTAAAGGTATGTACTATCTCTTTATTACGGGCAAATGCA +
Preference number: 5 (lower is better)
Translates to: IMWSPKGCKKWISAL*PLKVCTISLLRANA
Trigger: TGCATTTGCCCGTAATAAAGAGATAGTACATACCTTTAAGGGTCATAAGGCAGAAATCCATTTCTTGCAACCCTTTGGAGACCACATTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000504122.2
ENST00000505303.5
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS TCA 90 bp ATATCTGGGTACAAGGCCAGGAATTGTTGGAATGAAAAATGGTGCTaGTTTGGGTACTTTGGGTGGTTCCTTTGGTTTATTCTTTTTCTT +
Preference number: 5 (lower is better)
Translates to: ISGYKARNCWNEKWC*FGYFGWFLWFILFL
Trigger: AAGAAAAAGAATAAACCAAAGGAACCACCCAAAGTACCCAAATCAGCACCATTTTTCATTCCAACAATTCCTGGCCTTGTACCCAGATAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CAA 90 bp GGGCTACCTGGGTTTGCAATGGTTGTGAAAGAAAAGTATACTCAGCATTTTCTTTTATATCCACTGCTGTaGCAGTTATGTCATCTTTCT +
Preference number: 5 (lower is better)
Translates to: GLPGFAMVVKEKYTQHFLLYPLL*QLCHLS
Trigger: AGAAAGATGACATAACTGCAACAGCAGTGGATATAA...AAGAAAATGCTGAGTATACTTTTCTTTCACAACCATTGCAAACCCAGGTAGCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CAA 90 bp CTTCCAATGGAATTTGGAATTTCCCTTACCTATCCTTGGTATCAGTTTAACCATTTCTACATCTTGGGTTaGACAAGTACCAGGAAGCAT +
Preference number: 5 (lower is better)
Translates to: LPMEFGISLTYPWYQFNHFYILG*TSTRKH
Trigger: ATGCTTCCTGGTACTTGTCAAACCCAAGATGTAGAA...ATGGTTAAACTGATACCAAGGATAGGTAAGGGAAATTCCAAATTCCATTGGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CAA 90 bp CAAATAAAACATATGGTATTTGAGGGATGCAAAACCCTCAAATACAAGGACCGATTCTACATCTTGGGTTaGACAAGTACCAGGAAGCAT +
Preference number: 5 (lower is better)
Translates to: QIKHMVFEGCKTLKYKDRFYILG*TSTRKH
Trigger: ATGCTTCCTGGTACTTGTCAAACCCAAGATGTAGAA...TCGGTCCTTGTATTTGAGGGTTTTGCATCCCTCAAATACCATATGTTTTATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CAA 90 bp AAGCATATACCACAGAGAGAGCCTTATATGTACAAAAAGGGCTCATGTAGGATGCTATCAATTCATCACTaGGTTCTACTGTTTCTTCTG +
Preference number: 5 (lower is better)
Translates to: KHIPQREPYMYKKGSCRMLSIHH*VLLFLL
Trigger: CAGAAGAAACAGTAGAACCAAGTGATGAATTGATAG...CATCCTACATGAGCCCTTTTTGTACATATAAGGCTCTCTCTGTGGTATATGCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CAA 90 bp TATATGTACAAAAAGGGCTCATGTAGGATGATGTTCCTTTCAGCATTGTTTGTAGCTGATTTGGGTACTTaGGGTGGTTCCTTTGGTTTA +
Preference number: 5 (lower is better)
Translates to: YMYKKGSCRMMFLSALFVADLGT*GGSFGL
Trigger: TAAACCAAAGGAACCACCCAAAGTACCCAAATCAGC...TACAAACAATGCTGAAAGGAACATCATCCTACATGAGCCCTTTTTGTACATATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CAA 90 bp AAGCATATACCACAGAGAGAGCCTTATATGTACAAAAAGGGCTCATGTAGGATGCCTGGGATGACAAATTaGTTATTTCTTCTAGGAGTA +
Preference number: 5 (lower is better)
Translates to: KHIPQREPYMYKKGSCRMPGMTN*LFLLGV
Trigger: TACTCCTAGAAGAAATAACAAATTTGTCATCCCAGG...CATCCTACATGAGCCCTTTTTGTACATATAAGGCTCTCTCTGTGGTATATGCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CAA 90 bp AAGCATATACCACAGAGAGAGCCTTATATGTACAAAAAGGGCTCATGTAGGATGATCTTCCAATGGAATTaGGAATTTCCCTTACCTATC +
Preference number: 5 (lower is better)
Translates to: KHIPQREPYMYKKGSCRMIFQWN*EFPLPI
Trigger: GATAGGTAAGGGAAATTCCAAATTCCATTGGAAGAT...CATCCTACATGAGCCCTTTTTGTACATATAAGGCTCTCTCTGTGGTATATGCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CAA 90 bp AAGCATATACCACAGAGAGAGCCTTATATGTACAAAAAGGGCTCATGTAGGATGGAGGACATTAAACTATaGTTATCTACATGTCTGCAG +
Preference number: 5 (lower is better)
Translates to: KHIPQREPYMYKKGSCRMEDIKL*LSTCLQ
Trigger: CTGCAGACATGTAGATAACAATAGTTTAATGTCCTC...CATCCTACATGAGCCCTTTTTGTACATATAAGGCTCTCTCTGTGGTATATGCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CAA 90 bp CTTCCAATGGAATTTGGAATTTCCCTTACCTATCCTTGGTATCAGTTTAACCATCTTCTACAGAGGATATaGGGACTGAAGATGGTTTTC +
Preference number: 5 (lower is better)
Translates to: LPMEFGISLTYPWYQFNHLLQRI*GLKMVF
Trigger: GAAAACCATCTTCAGTCCCAATATCCTCTGTAGAAG...ATGGTTAAACTGATACCAAGGATAGGTAAGGGAAATTCCAAATTCCATTGGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CAA 90 bp CAAATAAAACATATGGTATTTGAGGGATGCAAAACCCTCAAATACAAGGACCGAATAGGCAAAGTACTGTaGGACAGTGCACAAGAGATT +
Preference number: 5 (lower is better)
Translates to: QIKHMVFEGCKTLKYKDRIGKVL*DSAQEI
Trigger: AATCTCTTGTGCACTGTCCAACAGTACTTTGCCTAT...TCGGTCCTTGTATTTGAGGGTTTTGCATCCCTCAAATACCATATGTTTTATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS GCA 90 bp AGGTTTTTCCATCGTGATTCAGGAAGAAGTGAAAGAGTCACCAATTaGTCATTCAACTGTTCTGGCGAATCATATTCTATCAATTCATCA +
Preference number: 5 (lower is better)
Translates to: RFFHRDSGRSERVTN*SFNCSGESYSINSS
Trigger: TGATGAATTGATAGAATATGATTCGCCAGAACAGTTGAATGAGCAATTGGTGACTCTTTCACTTCTTCCTGAATCACGATGGAAAAACCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CAA 90 bp CTTCCAATGGAATTTGGAATTTCCCTTACCTATCCTTGGTATCAGTTTAACCATTGTCCCAAGCTCTTATaGAATTTTTCATGTACCGTG +
Preference number: 5 (lower is better)
Translates to: LPMEFGISLTYPWYQFNHCPKLL*NFSCTV
Trigger: CACGGTACATGAAAAATTCAATAAGAGCTTGGGACA...ATGGTTAAACTGATACCAAGGATAGGTAAGGGAAATTCCAAATTCCATTGGAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CAA 90 bp CAAATAAAACATATGGTATTTGAGGGATGCAAAACCCTCAAATACAAGGACCGATGTCCCAAGCTCTTATaGAATTTTTCATGTACCGTG +
Preference number: 5 (lower is better)
Translates to: QIKHMVFEGCKTLKYKDRCPKLL*NFSCTV
Trigger: CACGGTACATGAAAAATTCAATAAGAGCTTGGGACA...TCGGTCCTTGTATTTGAGGGTTTTGCATCCCTCAAATACCATATGTTTTATTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CAA 90 bp CTAACAACGAACGAGAATGCTACTGGTGTTCATATTCAAACCACTGTGTTTCATCTATCAATTCATCACTaGGTTCTACTGTTTCTTCTG +
Preference number: 5 (lower is better)
Translates to: LTTNENATGVHIQTTVFHLSIHH*VLLFLL
Trigger: CAGAAGAAACAGTAGAACCAAGTGATGAATTGATAG...ATGAAACACAGTGGTTTGAATATGAACACCAGTAGCATTCTCGTTCGTTGTTAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CAA 90 bp CAAATAAAACATATGGTATTTGAGGGATGCAAAACCCTCAAATACAAGGACCGAGATTCTTTCAGAAGGTaGAGAGCAGTGTCATACTTA +
Preference number: 5 (lower is better)
Translates to: QIKHMVFEGCKTLKYKDRDSFRR*RAVSYL
Trigger: TAAGTATGACACTGCTCTCAACCTTCTGAAAGAATC...TCGGTCCTTGTATTTGAGGGTTTTGCATCCCTCAAATACCATATGTTTTATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CAA 90 bp CTTCCAATGGAATTTGGAATTTCCCTTACCTATCCTTGGTATCAGTTTAACCATAATTTTGAACAGATATaGGAAGCAGCGCTGTTTCAC +
Preference number: 5 (lower is better)
Translates to: LPMEFGISLTYPWYQFNHNFEQI*EAALFH
Trigger: GTGAAACAGCGCTGCTTCCAATATCTGTTCAAAATT...ATGGTTAAACTGATACCAAGGATAGGTAAGGGAAATTCCAAATTCCATTGGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CAA 90 bp CAAATAAAACATATGGTATTTGAGGGATGCAAAACCCTCAAATACAAGGACCGATTATATCCACTGCTGTaGCAGTTATGTCATCTTTCT +
Preference number: 5 (lower is better)
Translates to: QIKHMVFEGCKTLKYKDRLYPLL*QLCHLS
Trigger: AGAAAGATGACATAACTGCAACAGCAGTGGATATAA...TCGGTCCTTGTATTTGAGGGTTTTGCATCCCTCAAATACCATATGTTTTATTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CAA 90 bp CTTCCAATGGAATTTGGAATTTCCCTTACCTATCCTTGGTATCAGTTTAACCATCTATCAATTCATCACTaGGTTCTACTGTTTCTTCTG +
Preference number: 5 (lower is better)
Translates to: LPMEFGISLTYPWYQFNHLSIHH*VLLFLL
Trigger: CAGAAGAAACAGTAGAACCAAGTGATGAATTGATAG...ATGGTTAAACTGATACCAAGGATAGGTAAGGGAAATTCCAAATTCCATTGGAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CAA 90 bp CAAATAAAACATATGGTATTTGAGGGATGCAAAACCCTCAAATACAAGGACCGACCTGGGATGACAAATTaGTTATTTCTTCTAGGAGTA +
Preference number: 5 (lower is better)
Translates to: QIKHMVFEGCKTLKYKDRPGMTN*LFLLGV
Trigger: TACTCCTAGAAGAAATAACAAATTTGTCATCCCAGG...TCGGTCCTTGTATTTGAGGGTTTTGCATCCCTCAAATACCATATGTTTTATTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CAA 90 bp CTTCCAATGGAATTTGGAATTTCCCTTACCTATCCTTGGTATCAGTTTAACCATCCTGGGATGACAAATTaGTTATTTCTTCTAGGAGTA +
Preference number: 5 (lower is better)
Translates to: LPMEFGISLTYPWYQFNHPGMTN*LFLLGV
Trigger: TACTCCTAGAAGAAATAACAAATTTGTCATCCCAGG...ATGGTTAAACTGATACCAAGGATAGGTAAGGGAAATTCCAAATTCCATTGGAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS-3UTR CAA 90 bp TATATGTACAAAAAGGGCTCATGTAGGATGATGTTCCTTTCAGCATTGTTTGTAAATTTTGAACAGATATaGGAAGCAGCGCTGTTTCAC +
Preference number: 5 (lower is better)
Translates to: YMYKKGSCRMMFLSALFVNFEQI*EAALFH
Trigger: GTGAAACAGCGCTGCTTCCAATATCTGTTCAAAATT...TACAAACAATGCTGAAAGGAACATCATCCTACATGAGCCCTTTTTGTACATATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS GCA 90 bp AGTTTAGATGTGCATAAATTCAGAATAAAGTCCATACTTACTTACTaGAACCAGACTAAGTTTCTGAACGTCATAGGTGTGGAAACTCTT +
Preference number: 5 (lower is better)
Translates to: SLDVHKFRIKSILTY*NQTKFLNVIGVETL
Trigger: AAGAGTTTCCACACCTATGACGTTCAGAAACTTAGTCTGGTTGCAGTAAGTAAGTATGGACTTTATTCTGAATTTATGCACATCTAAACT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515784.1
CDS GCA 72 bp CCAAGGCCCGGAACCCCGCAAAAAGCGCGCTGGCCGTaGGCCTTTCTGAGGCCCGTTCCATTGCCGCCGCGA +
Preference number: 6 (lower is better)
Translates to: PRPGTPQKARWP*AFLRPVPLPPR
Trigger: TCGCGGCGGCAATGGAACGGGCCTCAGAAAGGCGCACGGCCAGCGCGCTTTTTGCGGGGTTCCGGGCCTTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000505303.5
ENST00000506538.6
ENST00000513710.4
ENST00000515784.1
ENST00000612402.4
CDS CAA 72 bp GCGCGCTGGCCGTGCGCCTTTCTGAGGCCCGTTCCATaGCCGCCGCGATCCCAGCTCCTCTCAGCTCTGGTC +
Preference number: 6 (lower is better)
Translates to: ARWPCAFLRPVP*PPRSQLLSALV
Trigger: GACCAGAGCTGAGAGGAGCTGGGATCGCGGCGGCAATGGAACGGGCCTCAGAAAGGCGCACGGCCAGCGCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000505303.5
ENST00000506538.6
ENST00000513710.4
ENST00000515784.1
ENST00000612402.4
CDS TCA 72 bp GAACCCCGCAAAAAGCGCGCTGGCCGTGCGCCTTTCTaGGGCCCGTTCCATTGCCGCCGCGATCCCAGCTCC +
Preference number: 6 (lower is better)
Translates to: EPRKKRAGRAPF*GPFHCRRDPSS
Trigger: GGAGCTGGGATCGCGGCGGCAATGGAACGGGCCTCAGAAAGGCGCACGGCCAGCGCGCTTTTTGCGGGGTTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000505303.5
ENST00000506538.6
ENST00000513710.4
ENST00000515784.1
ENST00000612402.4
CDS CCA 72 bp AAAGTCCCAAGGCCCGGAACCCCGCAAAAAGCGCGCTaGCCGTGCGCCTTTCTGAGGCCCGTTCCATTGCCG +
Preference number: 6 (lower is better)
Translates to: KVPRPGTPQKAR*PCAFLRPVPLP
Trigger: CGGCAATGGAACGGGCCTCAGAAAGGCGCACGGCCAGCGCGCTTTTTGCGGGGTTCCGGGCCTTGGGACTTT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000505303.5
ENST00000506538.6
ENST00000513710.4
ENST00000515784.1
ENST00000612402.4
CDS CAA 90 bp CCGCAAAAAGCGCGCTGGCCGTGCGCCTTTCTGAGGCCCGTTCCATaGCCGCCGCGATCCCAGCTCCTCTCAGCTCTGGTCCTGAAGGAA +
Preference number: 6 (lower is better)
Translates to: PQKARWPCAFLRPVP*PPRSQLLSALVLKE
Trigger: TTCCTTCAGGACCAGAGCTGAGAGGAGCTGGGATCGCGGCGGCAATGGAACGGGCCTCAGAAAGGCGCACGGCCAGCGCGCTTTTTGCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000505303.5
ENST00000506538.6
ENST00000513710.4
ENST00000515784.1
ENST00000612402.4
CDS GCA 72 bp CAGAGCTGCAGACACAACACCGCTTCCGGCGCCCGCTaGGAATCGCGTTTCCGGAGACTGCCCTCAGTGCAA +
Preference number: 6 (lower is better)
Translates to: QSCRHNTASGAR*ESRFRRLPSVQ
Trigger: TTGCACTGAGGGCAGTCTCCGGAAACGCGATTCGCAGCGGGCGCCGGAAGCGGTGTTGTGTCTGCAGCTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506538.6
ENST00000612402.4
CDS TCA 72 bp TGCCGCCGCGATCCCAGCTCCTCTCAGCTCTGGTCCTaGAGGAAAACACGTACCCAGTCCCTTCAGCGTGTC +
Preference number: 6 (lower is better)
Translates to: CRRDPSSSQLWS*RKTRTQSLQRV
Trigger: GACACGCTGAAGGGACTGGGTACGTGTTTTCCTTCAGGACCAGAGCTGAGAGGAGCTGGGATCGCGGCGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000505303.5
ENST00000506538.6
ENST00000513710.4
ENST00000515784.1
ENST00000612402.4
CDS GCA 72 bp TTCAGCGTGTCTAGTGGAACAGTCCTCTGCCAGAGCTaGAGACACAACACCGCTTCCGGCGCCCGCTGCGAA +
Preference number: 6 (lower is better)
Translates to: FSVSSGTVLCQS*RHNTASGARCE
Trigger: TTCGCAGCGGGCGCCGGAAGCGGTGTTGTGTCTGCAGCTCTGGCAGAGGACTGTTCCACTAGACACGCTGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505303.5
ENST00000506538.6
ENST00000612402.4
CDS CCA 72 bp AGTTCTCCCTCCAGAGCTCACATGGGAGGCGTGACTTaGGTTCCGAGGGCCAAGGTCTCCAGCACGTTGCCT +
Preference number: 6 (lower is better)
Translates to: SSPSRAHMGGVT*VPRAKVSSTLP
Trigger: AGGCAACGTGCTGGAGACCTTGGCCCTCGGAACCCAAGTCACGCCTCCCATGTGAGCTCTGGAGGGAGAACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506538.6
ENST00000612402.4
CDS CCA 72 bp GAACCGGCGCTTGAGCGCGCTGAACCGCACCACGTGTaGAATGTCGTTGCTGAAAAGTCCCAAGGCCCGGAA +
Preference number: 6 (lower is better)
Translates to: EPALERAEPHHV*NVVAEKSQGPE
Trigger: TTCCGGGCCTTGGGACTTTTCAGCAACGACATTCCACACGTGGTGCGGTTCAGCGCGCTCAAGCGCCGGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000505303.5
ENST00000506538.6
ENST00000513710.4
ENST00000515784.1
ENST00000612402.4
CDS CAA 72 bp AAGTTCTCCCTCCAGAGCTCACATGGGAGGCGTGACTaGGGTTCCGAGGGCCAAGGTCTCCAGCACGTTGCC +
Preference number: 6 (lower is better)
Translates to: KFSLQSSHGRRD*GSEGQGLQHVA
Trigger: GGCAACGTGCTGGAGACCTTGGCCCTCGGAACCCAAGTCACGCCTCCCATGTGAGCTCTGGAGGGAGAACTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506538.6
ENST00000612402.4
CDS CAA 72 bp TTGAGCGCGCTGAACCGCACCACGTGTGGAATGTCGTaGCTGAAAAGTCCCAAGGCCCGGAACCCCGCAAAA +
Preference number: 6 (lower is better)
Translates to: LSALNRTTCGMS*LKSPKARNPAK
Trigger: TTTTGCGGGGTTCCGGGCCTTGGGACTTTTCAGCAACGACATTCCACACGTGGTGCGGTTCAGCGCGCTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000505303.5
ENST00000506538.6
ENST00000513710.4
ENST00000515784.1
ENST00000612402.4
CDS CAA 72 bp TTCCGAGGGCCAAGGTCTCCAGCACGTTGCCTAGCATaGTTCTCCAGCTCTTTTGCGGTGGAAGGAAGCTCG +
Preference number: 6 (lower is better)
Translates to: FRGPRSPARCLA*FSSSFAVEGSS
Trigger: CGAGCTTCCTTCCACCGCAAAAGAGCTGGAGAACAATGCTAGGCAACGTGCTGGAGACCTTGGCCCTCGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506538.6
ENST00000612402.4
CDS CAA 72 bp TCACTCACAGACCCTCTGGGGAGTAGAACTAATTACTaGTGGGGAGGGAACTGCTCACTTGGGCAACTTGGA +
Preference number: 6 (lower is better)
Translates to: SLTDPLGSRTNY*WGGNCSLGQLG
Trigger: TCCAAGTTGCCCAAGTGAGCAGTTCCCTCCCCACAAGTAATTAGTTCTACTCCCCAGAGGGTCTGTGAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506538.6
CDS CCA 72 bp CCTAAGAGCATTGTCAGCGCCATTTGTGACAAGAAGTaGCTCTCTATGGAGAAATGTCAGTCCGGCAATTGC +
Preference number: 6 (lower is better)
Translates to: PKSIVSAICDKK*LSMEKCQSGNC
Trigger: GCAATTGCCGGACTGACATTTCTCCATAGAGAGCCACTTCTTGTCACAAATGGCGCTGACAATGCTCTTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000505303.5
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS CAA 90 bp ACATGGGAAGTTGCCAGAAAGTCTCCAGTAGGAGACATAGAAACATaGAGAGGAGCCGAGTCCAACAAAAAGCAGTCTATAAGGCACCCA +
Preference number: 6 (lower is better)
Translates to: TWEVARKSPVGDIET*RGAESNKKQSIRHP
Trigger: TGGGTGCCTTATAGACTGCTTTTTGTTGGACTCGGCTCCTCTCAATGTTTCTATGTCTCCTACTGGAGACTTTCTGGCAACTTCCCATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS TCA 72 bp AGGTTGAGCAAGATAGCTTACCTTGATGGCAAGCAATaGTACCATCCCAGTCACTTTCACGAGCTTCCTCTG +
Preference number: 6 (lower is better)
Translates to: RLSKIAYLDGKQ*YHPSHFHELPL
Trigger: CAGAGGAAGCTCGTGAAAGTGACTGGGATGGTATCATTGCTTGCCATCAAGGTAAGCTATCTTGCTCAACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000505303.5
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS CCA 72 bp TTCAAAACTGACAGAGGGATTCACTCACAGACCCTCTaGGGAGTAGAACTAATTACTTGTGGGGAGGGAACT +
Preference number: 6 (lower is better)
Translates to: FKTDRGIHSQTL*GVELITCGEGT
Trigger: AGTTCCCTCCCCACAAGTAATTAGTTCTACTCCCCAGAGGGTCTGTGAGTGAATCCCTCTGTCAGTTTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506538.6
CDS CCA 72 bp TTGTCAGCGCCATTTGTGACAAGAAGTGGCTCTCTATaGAGAAATGTCAGTCCGGCAATTGCTGTAGAGTGT +
Preference number: 6 (lower is better)
Translates to: LSAPFVTRSGSL*RNVSPAIAVEC
Trigger: ACACTCTACAGCAATTGCCGGACTGACATTTCTCCATAGAGAGCCACTTCTTGTCACAAATGGCGCTGACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000505303.5
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS GCA 72 bp CTGTCCAGCATCATCCCAATCATTTTCAAGAAGCTCTaGATAACTTCTATGGACCCACCACAATCAGGAGAC +
Preference number: 6 (lower is better)
Translates to: LSSIIPIIFKKL*ITSMDPPQSGD
Trigger: GTCTCCTGATTGTGGTGGGTCCATAGAAGTTATGCAGAGCTTCTTGAAAATGATTGGGATGATGCTGGACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS CAA 72 bp GTAGAACTAATTACTTGTGGGGAGGGAACTGCTCACTaGGGCAACTTGGATAAGTGTAGATTCCTCCCAGAA +
Preference number: 6 (lower is better)
Translates to: VELITCGEGTAH*GNLDKCRFLPE
Trigger: TTCTGGGAGGAATCTACACTTATCCAAGTTGCCCAAGTGAGCAGTTCCCTCCCCACAAGTAATTAGTTCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506538.6
CDS CAA 72 bp GTTGCCAGAAAGTCTCCAGTAGGAGACATAGAAACATaGAGAGGAGCCGAGTCCAACAAAAAGCAGTCTATA +
Preference number: 6 (lower is better)
Translates to: VARKSPVGDIET*RGAESNKKQSI
Trigger: TATAGACTGCTTTTTGTTGGACTCGGCTCCTCTCAATGTTTCTATGTCTCCTACTGGAGACTTTCTGGCAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS GCA 72 bp TGTGAGCTTGATCCTTGCCAAAACTTCCTCGATGTATaGCAGACTGCATGTTATATACATCTACAGTTCCTG +
Preference number: 6 (lower is better)
Translates to: CELDPCQNFLDV*QTACYIHLQFL
Trigger: CAGGAACTGTAGATGTATATAACATGCAGTCTGGCATACATCGAGGAAGTTTTGGCAAGGATCAAGCTCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000505303.5
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS CCA 72 bp TTGAGTAATCCTTCACTACCAGTTGTAACTGTCAACTaGTTTAATCCATCCACTGCGACACCTCTAACAGAT +
Preference number: 6 (lower is better)
Translates to: LSNPSLPVVTVN*FNPSTATPLTD
Trigger: ATCTGTTAGAGGTGTCGCAGTGGATGGATTAAACCAGTTGACAGTTACAACTGGTAGTGAAGGATTACTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000505303.5
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS CAA 72 bp AATGGGTCCAGTTTTCTTCCACCTGGGATGACAAATTaGTTATTTCTTCTAGGAGTACTGGCTCTGAAGGAA +
Preference number: 6 (lower is better)
Translates to: NGSSFLPPGMTN*LFLLGVLALKE
Trigger: TTCCTTCAGAGCCAGTACTCCTAGAAGAAATAACAAATTTGTCATCCCAGGTGGAAGAAAACTGGACCCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS CAA 90 bp AAGAATGCCATCAGTATCAACAGAGATAATGTGGTCTCCAAAGGGTaGCAAGAAATGGATTTCTGCCTTATGACCCTTAAAGGTATGTAC +
Preference number: 6 (lower is better)
Translates to: KNAISINRDNVVSKG*QEMDFCLMTLKGMY
Trigger: GTACATACCTTTAAGGGTCATAAGGCAGAAATCCATTTCTTGCAACCCTTTGGAGACCACATTATCTCTGTTGATACTGATGGCATTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000504122.2
ENST00000505303.5
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS TCA 72 bp TACAAGGCCAGGAATTGTTGGAATGAAAAATGGTGCTaGTTTGGGTACTTTGGGTGGTTCCTTTGGTTTATT +
Preference number: 6 (lower is better)
Translates to: YKARNCWNEKWC*FGYFGWFLWFI
Trigger: AATAAACCAAAGGAACCACCCAAAGTACCCAAATCAGCACCATTTTTCATTCCAACAATTCCTGGCCTTGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS GCA 72 bp CATCGTGATTCAGGAAGAAGTGAAAGAGTCACCAATTaGTCATTCAACTGTTCTGGCGAATCATATTCTATC +
Preference number: 6 (lower is better)
Translates to: HRDSGRSERVTN*SFNCSGESYSI
Trigger: GATAGAATATGATTCGCCAGAACAGTTGAATGAGCAATTGGTGACTCTTTCACTTCTTCCTGAATCACGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS CAA 90 bp CTGGGTACAAGGCCAGGAATTGTTGGAATGAAAAATGGTGCTGATTaGGGTACTTTGGGTGGTTCCTTTGGTTTATTCTTTTTCTTAATA +
Preference number: 6 (lower is better)
Translates to: LGTRPGIVGMKNGAD*GTLGGSFGLFFFLI
Trigger: TATTAAGAAAAAGAATAAACCAAAGGAACCACCCAAAGTACCCAAATCAGCACCATTTTTCATTCCAACAATTCCTGGCCTTGTACCCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS TCA 72 bp TCTCCAAAGGGTTGCAAGAAATGGATTTCTGCCTTATaGCCCTTAAAGGTATGTACTATCTCTTTATTACGG +
Preference number: 6 (lower is better)
Translates to: SPKGCKKWISAL*PLKVCTISLLR
Trigger: CCGTAATAAAGAGATAGTACATACCTTTAAGGGTCATAAGGCAGAAATCCATTTCTTGCAACCCTTTGGAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000504122.2
ENST00000505303.5
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS CCA 72 bp AAGAGTGATTGCAAATGGGTCCAGTTTTCTTCCACCTaGGATGACAAATTTGTTATTTCTTCTAGGAGTACT +
Preference number: 6 (lower is better)
Translates to: KSDCKWVQFSST*DDKFVISSRST
Trigger: AGTACTCCTAGAAGAAATAACAAATTTGTCATCCCAGGTGGAAGAAAACTGGACCCATTTGCAATCACTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS CAA 72 bp ATCAGTATCAACAGAGATAATGTGGTCTCCAAAGGGTaGCAAGAAATGGATTTCTGCCTTATGACCCTTAAA +
Preference number: 6 (lower is better)
Translates to: ISINRDNVVSKG*QEMDFCLMTLK
Trigger: TTTAAGGGTCATAAGGCAGAAATCCATTTCTTGCAACCCTTTGGAGACCACATTATCTCTGTTGATACTGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000504122.2
ENST00000505303.5
ENST00000506538.6
ENST00000513710.4
ENST00000612402.4
CDS GCA 72 bp GTGCATAAATTCAGAATAAAGTCCATACTTACTTACTaGAACCAGACTAAGTTTCTGAACGTCATAGGTGTG +
Preference number: 6 (lower is better)
Translates to: VHKFRIKSILTY*NQTKFLNVIGV
Trigger: CACACCTATGACGTTCAGAAACTTAGTCTGGTTGCAGTAAGTAAGTATGGACTTTATTCTGAATTTATGCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515784.1