RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for WDR35 (Homo sapiens)

Ensembl gene IDs: ENSG00000118965

Ensembl transcript IDs: ENST00000281405.9, ENST00000345530.8, ENST00000414212.5, ENST00000445063.5, ENST00000453014.1, ENST00000494964.1

Found 710 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TTGCAGCGCACAAATGCTTGCTCTGCAGTGTATAGATCCAGTTTCTaGAGAGCTGCTTCAGCCAGTAGGCGCCAAAGTCGGGGGTGTGGA +
Preference number: 1 (lower is better)
Translates to: LQRTNACSAVYRSSF*RAASASRRQSRGCG
Trigger: TCCACACCCCCGACTTTGGCGCCTACTGGCTGAAGCAGCTCTTCAGAAACTGGATCTATACACTGCAGAGCAAGCATTTGTGCGCTGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445063.5
3UTR TCA 90 bp CGCATGCGCAGAGTGCTAGCAGAGAGTAGATCTCCACAGGAGGGATaGTGTCTTCATAGTCTTTCAGGTGAAGAGCTGTCTTCAGTGCAG +
Preference number: 1 (lower is better)
Translates to: RMRRVLAESRSPQEG*CLHSLSGEELSSVQ
Trigger: CTGCACTGAAGACAGCTCTTCACCTGAAAGACTATGAAGACATCATCCCTCCTGTGGAGATCTACTCTCTGCTAGCACTCTGCGCATGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414212.5
3UTR TCA 90 bp GCCAGTAGGCGCCAAAGTCGGGGGTGTGGATTGTCCTCTATGAACTaGGATGCATCTTTAATTCCAACCTTCTCAATCAGTGCTCGGCTA +
Preference number: 1 (lower is better)
Translates to: ASRRQSRGCGLSSMN*DASLIPTFSISARL
Trigger: TAGCCGAGCACTGATTGAGAAGGTTGGAATTAAAGATGCATCTCAGTTCATAGAGGACAATCCACACCCCCGACTTTGGCGCCTACTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445063.5
3UTR GCA 90 bp TGTCTTCAGTGCAGTGTCCACACATCCCTCATAGAGCTGCCTCTGTaGAAGTATAAAGAAGTGGTAAGCCTCTGCCCCTCTCCATGCATT +
Preference number: 1 (lower is better)
Translates to: CLQCSVHTSLIELPL*KYKEVVSLCPSPCI
Trigger: AATGCATGGAGAGGGGCAGAGGCTTACCACTTCTTTATACTTGCACAGAGGCAGCTCTATGAGGGATGTGTGGACACTGCACTGAAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
3UTR CCA 90 bp ACCGTGTTTGCATACACTGCACATCCAGAATTGATACTCAGTGATTaGGCTTCCTGTGGCAACGCATGTTGGCAGTTTCCCTTCTCCACC +
Preference number: 1 (lower is better)
Translates to: TVFAYTAHPELILSD*ASCGNACWQFPFST
Trigger: GGTGGAGAAGGGAAACTGCCAACATGCGTTGCCACAGGAAGCCCAATCACTGAGTATCAATTCTGGATGTGCAGTGTATGCAAACACGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414212.5
3UTR CCA 90 bp TCCAGGAGACTGTCATCTGCATCACCAGATCCAGTTTTCAGGAGCTaGAGTACTCTAAACCAATCCCCCAATTTCAGCCGGAGGCCAATA +
Preference number: 1 (lower is better)
Translates to: SRRLSSASPDPVFRS*STLNQSPNFSRRPI
Trigger: TATTGGCCTCCGGCTGAAATTGGGGGATTGGTTTAGAGTACTCCAGCTCCTGAAAACTGGATCTGGTGATGCAGATGACAGTCTCCTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445063.5
3UTR CCA 90 bp ACCGTGTTTGCATACACTGCACATCCAGAATTGATACTCAGTGATTaGGCTTCCTGTGGCAACGCATGTTGGCAGTTTCCCTTCTCCACT +
Preference number: 1 (lower is better)
Translates to: TVFAYTAHPELILSD*ASCGNACWQFPFST
Trigger: AGTGGAGAAGGGAAACTGCCAACATGCGTTGCCACAGGAAGCCCAATCACTGAGTATCAATTCTGGATGTGCAGTGTATGCAAACACGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445063.5
3UTR GCA 90 bp CCCTTCTGTCCATCTCGAGATACGTTCTTTCAGCCTCTTCAAACCTaGCGAAGTAGCCAACAACTTCAGCCTGTTTCATTGACTCACTCA +
Preference number: 1 (lower is better)
Translates to: PFCPSRDTFFQPLQT*RSSQQLQPVSLTHS
Trigger: TGAGTGAGTCAATGAAACAGGCTGAAGTTGTTGGCTACTTCGGCAGGTTTGAAGAGGCTGAAAGAACGTATCTCGAGATGGACAGAAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445063.5
3UTR GCA 90 bp CTCATAGAGCTGCCTCTGTGCAAGTATAAAGAAGTGGTAAGCCTCTaGCCCTCTCCATGCATTATCTGTGAAACGATCTGTTGTAGACAG +
Preference number: 1 (lower is better)
Translates to: LIELPLCKYKEVVSL*PSPCIICETICCRQ
Trigger: CTGTCTACAACAGATCGTTTCACAGATAATGCATGGAGAGGGGCAGAGGCTTACCACTTCTTTATACTTGCACAGAGGCAGCTCTATGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
3UTR CCA 90 bp GTACAGCATTCAACCACTTTTGTCGATCAGCAAAGTAGTCTCCAATaGCATTGTTGGCTTGTTCCAGGAGACTGTCATCTGCATCACCAG +
Preference number: 1 (lower is better)
Translates to: VQHSTTFVDQQSSLQ*HCWLVPGDCHLHHQ
Trigger: CTGGTGATGCAGATGACAGTCTCCTGGAACAAGCCAACAATGCCATTGGAGACTACTTTGCTGATCGACAAAAGTGGTTGAATGCTGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445063.5
3UTR TCA 90 bp ACTGTCCGTTACTCGAGCATCCAAGTCAAAGAAAGTCAGAACTCCTaGGATGTCTATGATAGCAAGACGGCTAGAGTTGCAATTCAAGGA +
Preference number: 1 (lower is better)
Translates to: TVRYSSIQVKESQNS*DVYDSKTARVAIQG
Trigger: TCCTTGAATTGCAACTCTAGCCGTCTTGCTATCATAGACATCTCAGGAGTTCTGACTTTCTTTGACTTGGATGCTCGAGTAACGGACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445063.5
3UTR GCA 90 bp CCTCTGTGCAAGTATAAAGAAGTGGTAAGCCTCTGCCCCTCTCCATaGATTATCTGTGAAACGATCTGTTGTAGACAGAACTTCTTCTTC +
Preference number: 1 (lower is better)
Translates to: PLCKYKEVVSLCPSP*IICETICCRQNFFF
Trigger: GAAGAAGAAGTTCTGTCTACAACAGATCGTTTCACAGATAATGCATGGAGAGGGGCAGAGGCTTACCACTTCTTTATACTTGCACAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
3UTR GCA 90 bp TCCCAGACATCTCTTCGTTCCAATTTTAACAACTCTCCAACTACTTaGTGTCCCGTACTGTCCGTTACTCGAGCATCCAAGTCAAAGAAA +
Preference number: 1 (lower is better)
Translates to: SQTSLRSNFNNSPTT*CPVLSVTRASKSKK
Trigger: TTTCTTTGACTTGGATGCTCGAGTAACGGACAGTACGGGACAGCAAGTAGTTGGAGAGTTGTTAAAATTGGAACGAAGAGATGTCTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445063.5
3UTR CCA 90 bp CATTACAAAACCCAGGATTCAGGTGTTGCGGTCTTTCCACTCCACTaGCACGTTACACTAACAGTGTTAATCTATCATTGCTTTCTCCTT +
Preference number: 1 (lower is better)
Translates to: HYKTQDSGVAVFPLH*HVTLTVLIYHCFLL
Trigger: AAGGAGAAAGCAATGATAGATTAACACTGTTAGTGTAACGTGCCAGTGGAGTGGAAAGACCGCAACACCTGAATCCTGGGTTTTGTAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
3UTR GCA 90 bp TTCAACAGCTTTGTTCCATTGGTTGAGATGTACGCAGGTATCTACTaGTGCCTTTGGTTGACTACATTTCAAAAATGCAGTCACTGCTTG +
Preference number: 1 (lower is better)
Translates to: FNSFVPLVEMYAGIY*CLWLTTFQKCSHCL
Trigger: CAAGCAGTGACTGCATTTTTGAAATGTAGTCAACCAAAGGCAGCAGTAGATACCTGCGTACATCTCAACCAATGGAACAAAGCTGTTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414212.5
3UTR CCA 90 bp AAGGCAGAAGTGGCCTCTGAACTTTTTCCTTTAACTTTTCCTCGCTaGGCATTCTTCATCTGTTCATGGTATTGCTCTATAAGTAAGGCT +
Preference number: 1 (lower is better)
Translates to: KAEVASELFPLTFPR*AFFICSWYCSISKA
Trigger: AGCCTTACTTATAGAGCAATACCATGAACAGATGAAGAATGCCCAGCGAGGAAAAGTTAAAGGAAAAAGTTCAGAGGCCACTTCTGCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
3UTR TCA 90 bp CCTTGTGCCTTGAATGGTTTTACTATAATCAAGCACACCATCCATTaGTCCAGAAGGGGTATCATCAACATGATAAATTCTTTCTCTCCC +
Preference number: 1 (lower is better)
Translates to: PCALNGFTIIKHTIH*SRRGIINMINSFSP
Trigger: GGGAGAGAAAGAATTTATCATGTTGATGATACCCCTTCTGGATCAATGGATGGTGTGCTTGATTATAGTAAAACCATTCAAGGCACAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445063.5
3UTR GCA 90 bp CAGAGAATAGTCTCATCCCTAAAAACAGAAAGTCCTGTGGAAAGATaGAAGTTCAACAGGAGATGTACTGTCTTAGACAGACTTCTTTGT +
Preference number: 1 (lower is better)
Translates to: QRIVSSLKTESPVER*KFNRRCTVLDRLLC
Trigger: ACAAAGAAGTCTGTCTAAGACAGTACATCTCCTGTTGAACTTGCATCTTTCCACAGGACTTTCTGTTTTTAGGGATGAGACTATTCTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
3UTR GCA 90 bp TTTCCACTCCACTGGCACGTTACACTAACAGTGTTAATCTATCATTaGTTTCTCCTTGTTCCTCACTGTGTATTGCAAATTGGTTCAATA +
Preference number: 1 (lower is better)
Translates to: FPLHWHVTLTVLIYH*FLLVPHCVLQIGSI
Trigger: TATTGAACCAATTTGCAATACACAGTGAGGAACAAGGAGAAAGCAATGATAGATTAACACTGTTAGTGTAACGTGCCAGTGGAGTGGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
3UTR TCA 90 bp TCTAAATCTCTTCTCATAGCTCACTATTCCCAATCTGCAACATGCTaGACTTGTCTCTGTCTCTACAAGACAAAAACATATGAGATTGAG +
Preference number: 1 (lower is better)
Translates to: SKSLLIAHYSQSATC*TCLCLYKTKTYEIE
Trigger: CTCAATCTCATATGTTTTTGTCTTGTAGAGACAGAGACAAGTTCAGCATGTTGCAGATTGGGAATAGTGAGCTATGAGAAGAGATTTAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
3UTR CCA 90 bp TCTCTAGTACCATTTACACAGAAGACAAAGGTCCCCAAGACATTATaGCAGATCATTAAAACTTTCACAGATATAGATACCAAAGAGGCA +
Preference number: 1 (lower is better)
Translates to: SLVPFTQKTKVPKTL*QIIKTFTDIDTKEA
Trigger: TGCCTCTTTGGTATCTATATCTGTGAAAGTTTTAATGATCTGCCATAATGTCTTGGGGACCTTTGTCTTCTGTGTAAATGGTACTAGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
3UTR CCA 90 bp ACATTCTTGTCTTCTCCATCATTGCAAACAAATCAGGATTATCTTTaGCCCACTTCATATCCCAGACATCTCTTCGTTCCAATTTTAACA +
Preference number: 1 (lower is better)
Translates to: TFLSSPSLQTNQDYL*PTSYPRHLFVPILT
Trigger: TGTTAAAATTGGAACGAAGAGATGTCTGGGATATGAAGTGGGCCAAAGATAATCCTGATTTGTTTGCAATGATGGAGAAGACAAGAATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445063.5
3UTR-3UTR GCA 90 bp GCCTCAGGCACATTTCATCTGATTGAGTCATCTGGCTCAAGCGGCCACTCTGGTTTTGCCCCACTCCCATaGTTCCCCCACTCCCTACTC +
Preference number: 2 (lower is better)
Translates to: ASGTFHLIESSGSSGHSGFAPLP*FPHSLL
Trigger: GAGTAGGGAGTGGGGGAAGCATGGGAGTGGGGCAAA...ACCAGAGTGGCCGCTTGAGCCAGATGACTCAATCAGATGAAATGTGCCTGAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
3UTR-3UTR GCA 90 bp GCTTCCTGTGGCAACGCATGTTGGCAGTTTCCCTTCTCCACCTTCCATAAGGCTAAGTCCCAAAGGCTCTaGTGGCGCATGCGCAGAGTG +
Preference number: 2 (lower is better)
Translates to: ASCGNACWQFPFSTFHKAKSQRL*WRMRRV
Trigger: CACTCTGCGCATGCGCCAGCAGAGCCTTTGGGACTT...AGCCTTATGGAAGGTGGAGAAGGGAAACTGCCAACATGCGTTGCCACAGGAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414212.5
3UTR-3UTR GCA 90 bp GCATACACTGCACATCCAGAATTGATACTCAGTGATTGGGCTTCCTGTGGCAACGAAGTGGTAAGCCTCTaGCCCTCTCCATGCATTATC +
Preference number: 2 (lower is better)
Translates to: AYTAHPELILSDWASCGNEVVSL*PSPCII
Trigger: GATAATGCATGGAGAGGGGCAGAGGCTTACCACTTC...GTTGCCACAGGAAGCCCAATCACTGAGTATCAATTCTGGATGTGCAGTGTATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
3UTR-3UTR GCA 90 bp GGCAGAAGCTGTAGTGGCTTATTTCCTGAGCAAGGACACCGTGTTTGCATACACAACTCTCCAACTACTTaGTGTCCCGTACTGTCCGTT +
Preference number: 2 (lower is better)
Translates to: GRSCSGLFPEQGHRVCIHNSPTT*CPVLSV
Trigger: AACGGACAGTACGGGACAGCAAGTAGTTGGAGAGTT...GTGTATGCAAACACGGTGTCCTTGCTCAGGAAATAAGCCACTACAGCTTCTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445063.5
3UTR-3UTR CCA 90 bp AAGAGCTGTCTTCAGTGCAGTGTCCACACATCCCTCATAGAGCTGCCTCTGTGCACAGCTTTGTTCCATTaGTTGAGATGTACGCAGGTA +
Preference number: 2 (lower is better)
Translates to: KSCLQCSVHTSLIELPLCTALFH*LRCTQV
Trigger: TACCTGCGTACATCTCAACCAATGGAACAAAGCTGT...GCACAGAGGCAGCTCTATGAGGGATGTGTGGACACTGCACTGAAGACAGCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414212.5
3UTR-3UTR CCA 90 bp GTAAGCCTCTGCCCCTCTCCATGCATTATCTGTGAAACGATCTGTTGTAGACAGTATCCCACTGGACTATaGCATAAGGGGCAGAAGCTG +
Preference number: 2 (lower is better)
Translates to: VSLCPSPCIICETICCRQYPTGL*HKGQKL
Trigger: CAGCTTCTGCCCCTTATGCCATAGTCCAGTGGGATA...CTGTCTACAACAGATCGTTTCACAGATAATGCATGGAGAGGGGCAGAGGCTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
3UTR-3UTR TCA 90 bp TGGCTTGTTCCAGGAGACTGTCATCTGCATCACCAGATCCAGTTTTCAGGAGCTTATAGATCCAGTTTCTaGAGAGCTGCTTCAGCCAGT +
Preference number: 2 (lower is better)
Translates to: WLVPGDCHLHHQIQFSGAYRSSF*RAASAS
Trigger: ACTGGCTGAAGCAGCTCTTCAGAAACTGGATCTATA...AGCTCCTGAAAACTGGATCTGGTGATGCAGATGACAGTCTCCTGGAACAAGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445063.5
3UTR-3UTR GCA 90 bp GCACATCCAGAATTGATACTCAGTGATTGGGCTTCCTGTGGCAACGCATGTTGGTACGCAGGTATCTACTaGTGCCTTTGGTTGACTACA +
Preference number: 2 (lower is better)
Translates to: AHPELILSDWASCGNACWYAGIY*CLWLTT
Trigger: TGTAGTCAACCAAAGGCAGCAGTAGATACCTGCGTA...CCAACATGCGTTGCCACAGGAAGCCCAATCACTGAGTATCAATTCTGGATGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414212.5
3UTR-3UTR GCA 90 bp GAGCTGTCTTCAGTGCAGTGTCCACACATCCCTCATAGAGCTGCCTCTGTGCAACTTTGCCTCTTCATCTaGAATCTAGCTAACAGAGAT +
Preference number: 2 (lower is better)
Translates to: ELSSVQCPHIPHRAASVQLCLFI*NLANRD
Trigger: ATCTCTGTTAGCTAGATTGCAGATGAAGAGGCAAAG...TTGCACAGAGGCAGCTCTATGAGGGATGTGTGGACACTGCACTGAAGACAGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414212.5
3UTR-3UTR GCA 90 bp GCATACACTGCACATCCAGAATTGATACTCAGTGATTGGGCTTCCTGTGGCAACCTCTGCCCCTCTCCATaGATTATCTGTGAAACGATC +
Preference number: 2 (lower is better)
Translates to: AYTAHPELILSDWASCGNLCPSP*IICETI
Trigger: GATCGTTTCACAGATAATGCATGGAGAGGGGCAGAG...GTTGCCACAGGAAGCCCAATCACTGAGTATCAATTCTGGATGTGCAGTGTATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
3UTR-3UTR CCA 90 bp GCCTCAGGCACATTTCATCTGATTGAGTCATCTGGCTCAAGCGGCCACTCTGGTAATAGTGCAAAGGTCTaGTCTTTAGCCACAAAATGG +
Preference number: 2 (lower is better)
Translates to: ASGTFHLIESSGSSGHSGNSAKV*SLATKW
Trigger: CCATTTTGTGGCTAAAGACCAGACCTTTGCACTATT...ACCAGAGTGGCCGCTTGAGCCAGATGACTCAATCAGATGAAATGTGCCTGAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
3UTR-3UTR CCA 90 bp CTTGCTGTCCCGTACTGTCCGTTACTCGAGCATCCAAGTCAAAGAAAGTCAGAACAGCCAAGGCAGAAGTaGCCTCTGAACTTTTTCCTT +
Preference number: 2 (lower is better)
Translates to: LAVPYCPLLEHPSQRKSEQPRQK*PLNFFL
Trigger: AAGGAAAAAGTTCAGAGGCCACTTCTGCCTTGGCTG...TTCTGACTTTCTTTGACTTGGATGCTCGAGTAACGGACAGTACGGGACAGCAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445063.5
3UTR CAA 90 bp CCACTTTTGTCGATCAGCAAAGTAGTCTCCAATGGCATTGTTGGCTaGTTCCAGGAGACTGTCATCTGCATCACCAGATCCAGTTTTCAG +
Preference number: 2 (lower is better)
Translates to: PLLSISKVVSNGIVG*FQETVICITRSSFQ
Trigger: CTGAAAACTGGATCTGGTGATGCAGATGACAGTCTCCTGGAACAAGCCAACAATGCCATTGGAGACTACTTTGCTGATCGACAAAAGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445063.5
3UTR-3UTR TCA 90 bp GTCCTGCAGGAACCTTTCAGACAGGCAGAACTAATAAGTGTGCCATCCCTACAACAGGCACATTTCATCTaGTTGAGTCATCTGGCTCAA +
Preference number: 2 (lower is better)
Translates to: VLQEPFRQAELISVPSLQQAHFI*LSHLAQ
Trigger: TTGAGCCAGATGACTCAATCAGATGAAATGTGCCTG...TTGTAGGGATGGCACACTTATTAGTTCTGCCTGTCTGAAAGGTTCCTGCAGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
3UTR-3UTR TCA 90 bp GTCATCTGCATCACCAGATCCAGTTTTCAGGAGCTGGAGTACTCTAAACCAATCAAGCACACCATCCATTaGTCCAGAAGGGGTATCATC +
Preference number: 2 (lower is better)
Translates to: VICITRSSFQELEYSKPIKHTIH*SRRGII
Trigger: GATGATACCCCTTCTGGATCAATGGATGGTGTGCTT...GATTGGTTTAGAGTACTCCAGCTCCTGAAAACTGGATCTGGTGATGCAGATGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445063.5
3UTR-3UTR TCA 90 bp GCAGAAGTGGCCTCTGAACTTTTTCCTTTAACTTTTCCTCGCTGGGCATTCTTCGGTAGACTGTATCTCTaGATGGTGCCAGATTCACGA +
Preference number: 2 (lower is better)
Translates to: AEVASELFPLTFPRWAFFGRLYL*MVPDSR
Trigger: TCGTGAATCTGGCACCATTCAGAGATACAGTCTACC...GAAGAATGCCCAGCGAGGAAAAGTTAAAGGAAAAAGTTCAGAGGCCACTTCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445063.5
3UTR-3UTR GCA 90 bp CTTGTTAGGCACACTGCTTATTTGTACAGCTTTATCAGTCAGTTCCATCATTTCTTTGCCCCACTCCCATaGTTCCCCCACTCCCTACTC +
Preference number: 2 (lower is better)
Translates to: LVRHTAYLYSFISQFHHFFAPLP*FPHSLL
Trigger: GAGTAGGGAGTGGGGGAAGCATGGGAGTGGGGCAAA...GAAATGATGGAACTGACTGATAAAGCTGTACAAATAAGCAGTGTGCCTAACAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
3UTR-3UTR GCA 90 bp GCAGAAGCTGTAGTGGCTTATTTCCTGAGCAAGGACACCGTGTTTGCATACACTTGTATCTCTGAATGGTaGCAGATTCACGACCCACAA +
Preference number: 2 (lower is better)
Translates to: AEAVVAYFLSKDTVFAYTCISEW*QIHDPQ
Trigger: TTGTGGGTCGTGAATCTGGCACCATTCAGAGATACA...AGTGTATGCAAACACGGTGTCCTTGCTCAGGAAATAAGCCACTACAGCTTCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445063.5
3UTR-3UTR CCA 90 bp CTGTCTTCAGTGCAGTGTCCACACATCCCTCATAGAGCTGCCTCTGTGCAAGTATTAACTTTTCCTCGCTaGGCATTCTTCATCTGTTCA +
Preference number: 2 (lower is better)
Translates to: LSSVQCPHIPHRAASVQVLTFPR*AFFICS
Trigger: TGAACAGATGAAGAATGCCCAGCGAGGAAAAGTTAA...TACTTGCACAGAGGCAGCTCTATGAGGGATGTGTGGACACTGCACTGAAGACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
3UTR-3UTR CCA 90 bp GTGGCCTCTGAACTTTTTCCTTTAACTTTTCCTCGCTGGGCATTCTTCATCTGTTATCCCACTGGACTATaGCATAAGGGGCAGAAGCTG +
Preference number: 2 (lower is better)
Translates to: VASELFPLTFPRWAFFICYPTGL*HKGQKL
Trigger: CAGCTTCTGCCCCTTATGCCATAGTCCAGTGGGATA...ACAGATGAAGAATGCCCAGCGAGGAAAAGTTAAAGGAAAAAGTTCAGAGGCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
3UTR-3UTR TCA 90 bp AGGTGTTGCGGTCTTTCCACTCCACTGGCACGTTACACTAACAGTGTTAATCTACAATCTGCAACATGCTaGACTTGTCTCTGTCTCTAC +
Preference number: 2 (lower is better)
Translates to: RCCGLSTPLARYTNSVNLQSATC*TCLCLY
Trigger: GTAGAGACAGAGACAAGTTCAGCATGTTGCAGATTG...TAGATTAACACTGTTAGTGTAACGTGCCAGTGGAGTGGAAAGACCGCAACACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
3UTR-3UTR TCA 90 bp GCATACACTGCACATCCAGAATTGATACTCAGTGATTGGGCTTCCTGTGGCAACCTTTGTTCCATTGGTTaGGATGTACGCAGGTATCTA +
Preference number: 2 (lower is better)
Translates to: AYTAHPELILSDWASCGNLCSIG*DVRRYL
Trigger: TAGATACCTGCGTACATCTCAACCAATGGAACAAAG...GTTGCCACAGGAAGCCCAATCACTGAGTATCAATTCTGGATGTGCAGTGTATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414212.5
3UTR-3UTR TCA 90 bp GCACATCCAGAATTGATACTCAGTGATTGGGCTTCCTGTGGCAACGCATGTTGGGTACATAGAGCTTCTTaGCACGTAAAGGTTTACTTC +
Preference number: 2 (lower is better)
Translates to: AHPELILSDWASCGNACWVHRAS*HVKVYF
Trigger: GAAGTAAACCTTTACGTGTCAAGAAGCTCTATGTAC...CCAACATGCGTTGCCACAGGAAGCCCAATCACTGAGTATCAATTCTGGATGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
3UTR-3UTR TCA 90 bp GTAAGCCTCTGCCCCTCTCCATGCATTATCTGTGAAACGATCTGTTGTAGACAGGAAAGTCAGAACTCCTaGGATGTCTATGATAGCAAG +
Preference number: 2 (lower is better)
Translates to: VSLCPSPCIICETICCRQESQNS*DVYDSK
Trigger: CTTGCTATCATAGACATCTCAGGAGTTCTGACTTTC...CTGTCTACAACAGATCGTTTCACAGATAATGCATGGAGAGGGGCAGAGGCTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445063.5
3UTR-3UTR GCA 90 bp CTGTCTTCAGTGCAGTGTCCACACATCCCTCATAGAGCTGCCTCTGTGCAAGTAATCTGTTCATGGTATTaGTCTATAAGTAAGGCTGAC +
Preference number: 2 (lower is better)
Translates to: LSSVQCPHIPHRAASVQVICSWY*SISKAD
Trigger: GTCAGCCTTACTTATAGAGCAATACCATGAACAGAT...TACTTGCACAGAGGCAGCTCTATGAGGGATGTGTGGACACTGCACTGAAGACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
3UTR-3UTR GCA 90 bp GCAAACAAATCAGGATTATCTTTGGCCCACTTCATATCCCAGACATCTCTTCGTGAAGTGGTAAGCCTCTaGCCCTCTCCATGCATTATC +
Preference number: 2 (lower is better)
Translates to: ANKSGLSLAHFISQTSLREVVSL*PSPCII
Trigger: GATAATGCATGGAGAGGGGCAGAGGCTTACCACTTC...ACGAAGAGATGTCTGGGATATGAAGTGGGCCAAAGATAATCCTGATTTGTTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445063.5
3UTR-3UTR GCA 90 bp CAGCATTCAACCACTTTTGTCGATCAGCAAAGTAGTCTCCAATGGCATTGTTGGAACCTTCTCAATCAGTaGTCGGCTATCTCGCAGAGA +
Preference number: 2 (lower is better)
Translates to: QHSTTFVDQQSSLQWHCWNLLNQ*SAISQR
Trigger: TCTCTGCGAGATAGCCGAGCACTGATTGAGAAGGTT...CCAACAATGCCATTGGAGACTACTTTGCTGATCGACAAAAGTGGTTGAATGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445063.5
3UTR-3UTR CCA 90 bp TATAAAGAAGTGGTAAGCCTCTGCCCCTCTCCATGCATTATCTGTGAAACGATCCAGCCAAGGCAGAAGTaGCCTCTGAACTTTTTCCTT +
Preference number: 2 (lower is better)
Translates to: YKEVVSLCPSPCIICETIQPRQK*PLNFFL
Trigger: AAGGAAAAAGTTCAGAGGCCACTTCTGCCTTGGCTG...GATCGTTTCACAGATAATGCATGGAGAGGGGCAGAGGCTTACCACTTCTTTATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
3UTR-3UTR TCA 90 bp GTCCTGCAGGAACCTTTCAGACAGGCAGAACTAATAAGTGTGCCATCCCTACAAACAAAAGAGAGAGGGTaGGAGAAAACATGGTTGATT +
Preference number: 2 (lower is better)
Translates to: VLQEPFRQAELISVPSLQTKERG*EKTWLI
Trigger: AATCAACCATGTTTTCTCTCACCCTCTCTCTTTTGT...TTGTAGGGATGGCACACTTATTAGTTCTGCCTGTCTGAAAGGTTCCTGCAGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
3UTR-3UTR TCA 90 bp AGCCTCTGCCCCTCTCCATGCATTATCTGTGAAACGATCTGTTGTAGACAGAACGTACATAGAGCTTCTTaGCACGTAAAGGTTTACTTC +
Preference number: 2 (lower is better)
Translates to: SLCPSPCIICETICCRQNVHRAS*HVKVYF
Trigger: GAAGTAAACCTTTACGTGTCAAGAAGCTCTATGTAC...GTTCTGTCTACAACAGATCGTTTCACAGATAATGCATGGAGAGGGGCAGAGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
3UTR-3UTR GCA 90 bp TTCCTGAGCAAGGACACCGTGTTTGCATACACTGCACATCCAGAATTGATACTCGCAGGTATCTACTGCTaGCTTTGGTTGACTACATTT +
Preference number: 2 (lower is better)
Translates to: FLSKDTVFAYTAHPELILAGIYC*LWLTTF
Trigger: AAATGTAGTCAACCAAAGGCAGCAGTAGATACCTGC...GAGTATCAATTCTGGATGTGCAGTGTATGCAAACACGGTGTCCTTGCTCAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414212.5
3UTR-3UTR GCA 90 bp CTGTCTTCAGTGCAGTGTCCACACATCCCTCATAGAGCTGCCTCTGTGCAAGTATTTACTTCCTTTCTTTaGCTCTTCATCTGCAATCTA +
Preference number: 2 (lower is better)
Translates to: LSSVQCPHIPHRAASVQVFTSFL*LFICNL
Trigger: TAGATTGCAGATGAAGAGGCAAAGAAAGGAAGTAAA...TACTTGCACAGAGGCAGCTCTATGAGGGATGTGTGGACACTGCACTGAAGACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414212.5
3UTR-3UTR GCA 90 bp CCTGAGCAAGGACACCGTGTTTGCATACACTGCACATCCAGAATTGATACTCAGATAGAGCTGCCTCTGTaGAAGTATAAAGAAGTGGTA +
Preference number: 2 (lower is better)
Translates to: PEQGHRVCIHCTSRIDTQIELPL*KYKEVV
Trigger: TACCACTTCTTTATACTTGCACAGAGGCAGCTCTAT...CTGAGTATCAATTCTGGATGTGCAGTGTATGCAAACACGGTGTCCTTGCTCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
3UTR-3UTR GCA 90 bp CAGTGCAGTGTCCACACATCCCTCATAGAGCTGCCTCTGTGCAAGTATAAAGAACGTGTTTGCATACACTaGACATCCAGAATTGATACT +
Preference number: 2 (lower is better)
Translates to: QCSVHTSLIELPLCKYKERVCIH*TSRIDT
Trigger: AGTATCAATTCTGGATGTGCAGTGTATGCAAACACG...TTCTTTATACTTGCACAGAGGCAGCTCTATGAGGGATGTGTGGACACTGCACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
3UTR-3UTR GCA 90 bp TATTTCCTGAGCAAGGACACCGTGTTTGCATACACTGCACATCCAGAATTGATATGCTGTGAGCTTCTTTaGCACACGATATTGCCAGGT +
Preference number: 2 (lower is better)
Translates to: YFLSKDTVFAYTAHPELICCELL*HTILPG
Trigger: ACCTGGCAATATCGTGTGGCAAAGAAGCTCACAGCA...TATCAATTCTGGATGTGCAGTGTATGCAAACACGGTGTCCTTGCTCAGGAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445063.5
3UTR-3UTR TCA 90 bp ACCTGCCGAAGTAGCCAACAACTTCAGCCTGTTTCATTGACTCACTCAGTAGTTACAAAAGAGAGAGGGTaGGAGAAAACATGGTTGATT +
Preference number: 2 (lower is better)
Translates to: TCRSSQQLQPVSLTHSVVTKERG*EKTWLI
Trigger: AATCAACCATGTTTTCTCTCACCCTCTCTCTTTTGT...AACTACTGAGTGAGTCAATGAAACAGGCTGAAGTTGTTGGCTACTTCGGCAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445063.5
3UTR-3UTR TCA 90 bp AGGTGTTGCGGTCTTTCCACTCCACTGGCACGTTACACTAACAGTGTTAATCTACCATCGCCTCACTTCTaGAAATACAATAAAGAAGAC +
Preference number: 2 (lower is better)
Translates to: RCCGLSTPLARYTNSVNLPSPHF*KYNKED
Trigger: GTCTTCTTTATTGTATTTTCAGAAGTGAGGCGATGG...TAGATTAACACTGTTAGTGTAACGTGCCAGTGGAGTGGAAAGACCGCAACACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
3UTR-3UTR TCA 90 bp AAGTCTGAGGAGTCAACAGGTGATTCTAGAACTAAAGCAAATGAAAGTGCAACCAAGTGTACTTGCCCCTaGCACCCTTCTATAGAGCAA +
Preference number: 2 (lower is better)
Translates to: KSEESTGDSRTKANESATKCTCP*HPSIEQ
Trigger: TTGCTCTATAGAAGGGTGTCAGGGGCAAGTACACTT...GGTTGCACTTTCATTTGCTTTAGTTCTAGAATCACCTGTTGACTCCTCAGACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
3UTR-3UTR TCA 90 bp GCATACACTGCACATCCAGAATTGATACTCAGTGATTGGGCTTCCTGTGGCAACCAGGATCCAAGTTTCTaGAAACATACATTCTTGTCT +
Preference number: 2 (lower is better)
Translates to: AYTAHPELILSDWASCGNQDPSF*KHTFLS
Trigger: AGACAAGAATGTATGTTTTCAGAAACTTGGATCCTG...GTTGCCACAGGAAGCCCAATCACTGAGTATCAATTCTGGATGTGCAGTGTATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445063.5
3UTR-3UTR GCA 90 bp GTCCTGCAGGAACCTTTCAGACAGGCAGAACTAATAAGTGTGCCATCCCTACAAGTGTTAATCTATCATTaGTTTCTCCTTGTTCCTCAC +
Preference number: 2 (lower is better)
Translates to: VLQEPFRQAELISVPSLQVLIYH*FLLVPH
Trigger: GTGAGGAACAAGGAGAAAGCAATGATAGATTAACAC...TTGTAGGGATGGCACACTTATTAGTTCTGCCTGTCTGAAAGGTTCCTGCAGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
3UTR-3UTR GCA 90 bp TACACTGCACATCCAGAATTGATACTCAGTGATTGGGCTTCCTGTGGCAACGCAATCTGTTCATGGTATTaGTCTATAAGTAAGGCTGAC +
Preference number: 2 (lower is better)
Translates to: YTAHPELILSDWASCGNAICSWY*SISKAD
Trigger: GTCAGCCTTACTTATAGAGCAATACCATGAACAGAT...TGCGTTGCCACAGGAAGCCCAATCACTGAGTATCAATTCTGGATGTGCAGTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
3UTR-3UTR GCA 90 bp TTGATACTCAGTGATTGGGCTTCCTGTGGCAACGCATGTTGGCAGTTTCCCTTCTGTCTTCTCCATCATTaGAAACAAATCAGGATTATC +
Preference number: 2 (lower is better)
Translates to: LILSDWASCGNACWQFPFCLLHH*KQIRII
Trigger: GATAATCCTGATTTGTTTGCAATGATGGAGAAGACA...GAAGGGAAACTGCCAACATGCGTTGCCACAGGAAGCCCAATCACTGAGTATCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445063.5
3UTR-3UTR GCA 90 bp GCGTTCCTGGTTCCGTCCTTGTACATAATATTGTACAGCATTCAACCACTTTTGCAGGAGACTGTCATCTaGATCACCAGATCCAGTTTT +
Preference number: 2 (lower is better)
Translates to: AFLVPSLYIILYSIQPLLQETVI*ITRSSF
Trigger: AAAACTGGATCTGGTGATGCAGATGACAGTCTCCTG...CAAAAGTGGTTGAATGCTGTACAATATTATGTACAAGGACGGAACCAGGAACGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445063.5
3UTR-3UTR CCA 90 bp CCACTGGACTATGGCATAAGGGGCAGAAGCTGTAGTGGCTTATTTCCTGAGCAAATCTACTGCTGCCTTTaGTTGACTACATTTCAAAAA +
Preference number: 2 (lower is better)
Translates to: PLDYGIRGRSCSGLFPEQIYCCL*LTTFQK
Trigger: TTTTTGAAATGTAGTCAACCAAAGGCAGCAGTAGAT...TTGCTCAGGAAATAAGCCACTACAGCTTCTGCCCCTTATGCCATAGTCCAGTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414212.5
3UTR-3UTR CCA 90 bp GCACATCCAGAATTGATACTCAGTGATTGGGCTTCCTGTGGCAACGCATGTTGGATTGGAAGTAACTTGTaGTTTTCTGGAAGTGAAATG +
Preference number: 2 (lower is better)
Translates to: AHPELILSDWASCGNACWIGSNL*FSGSEM
Trigger: CATTTCACTTCCAGAAAACCACAAGTTACTTCCAAT...CCAACATGCGTTGCCACAGGAAGCCCAATCACTGAGTATCAATTCTGGATGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445063.5
3UTR-3UTR TCA 90 bp AAGTCTGAGGAGTCAACAGGTGATTCTAGAACTAAAGCAAATGAAAGTGCAACCCAGGCACATTTCATCTaGTTGAGTCATCTGGCTCAA +
Preference number: 2 (lower is better)
Translates to: KSEESTGDSRTKANESATQAHFI*LSHLAQ
Trigger: TTGAGCCAGATGACTCAATCAGATGAAATGTGCCTG...GGTTGCACTTTCATTTGCTTTAGTTCTAGAATCACCTGTTGACTCCTCAGACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
3UTR-3UTR TCA 90 bp TTTCTGATTTGGGGAAATTTCCCATTCTGGTATAGAACAAATGAGAAAGCTGGATCAATTACCCACTGGTaGCACTCATTCTGGCCTGTC +
Preference number: 2 (lower is better)
Translates to: FLIWGNFPFWYRTNEKAGSITHW*HSFWPV
Trigger: GACAGGCCAGAATGAGTGTCACCAGTGGGTAATTGA...TCCAGCTTTCTCATTTGTTCTATACCAGAATGGGAAATTTCCCCAAATCAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
3UTR-3UTR CCA 90 bp CTTTTGTCGATCAGCAAAGTAGTCTCCAATGGCATTGTTGGCTTGTTCCAGGAGCCCTTGTGCCTTGAATaGTTTTACTATAATCAAGCA +
Preference number: 2 (lower is better)
Translates to: LLSISKVVSNGIVGLFQEPLCLE*FYYNQA
Trigger: TGCTTGATTATAGTAAAACCATTCAAGGCACAAGGG...CTCCTGGAACAAGCCAACAATGCCATTGGAGACTACTTTGCTGATCGACAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445063.5
3UTR-3UTR CCA 90 bp AATATTGTACAGCATTCAACCACTTTTGTCGATCAGCAAAGTAGTCTCCAATGGGACTGTATCTCTGAATaGTGCCAGATTCACGACCCA +
Preference number: 2 (lower is better)
Translates to: NIVQHSTTFVDQQSSLQWDCISE*CQIHDP
Trigger: TGGGTCGTGAATCTGGCACCATTCAGAGATACAGTC...CCATTGGAGACTACTTTGCTGATCGACAAAAGTGGTTGAATGCTGTACAATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445063.5
3UTR CAA 90 bp CTAAGTATGCATGAGACATATAAAGCCTTCAGTATGTGTGAGAAGTaGATTCAATTACCCACTGGTGACACTCATTCTGGCCTGTCCTTA +
Preference number: 2 (lower is better)
Translates to: LSMHETYKAFSMCEK*IQLPTGDTHSGLSL
Trigger: TAAGGACAGGCCAGAATGAGTGTCACCAGTGGGTAATTGAATCAACTTCTCACACATACTGAAGGCTTTATATGTCTCATGCATACTTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
3UTR-3UTR TCA 90 bp AGGAGTCAACAGGTGATTCTAGAACTAAAGCAAATGAAAGTGCAACCAACAAATAAGTGTACTTGCCCCTaGCACCCTTCTATAGAGCAA +
Preference number: 2 (lower is better)
Translates to: RSQQVILELKQMKVQPTNKCTCP*HPSIEQ
Trigger: TTGCTCTATAGAAGGGTGTCAGGGGCAAGTACACTT...ATTTGTTGGTTGCACTTTCATTTGCTTTAGTTCTAGAATCACCTGTTGACTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
3UTR-3UTR TCA 90 bp TCAATATCTTATCTGATGCAGTTATGGCACAAATTGGATCCCTTGTGCCTTGAACGAGACCGTGTGATCTaGTTAATTTCCAATGCTGTG +
Preference number: 2 (lower is better)
Translates to: SISYLMQLWHKLDPLCLERDRVI*LISNAV
Trigger: CACAGCATTGGAAATTAATCAGATCACACGGTCTCG...TTCAAGGCACAAGGGATCCAATTTGTGCCATAACTGCATCAGATAAGATATTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445063.5
3UTR-3UTR CCA 90 bp TATTTCCTGAGCAAGGACACCGTGTTTGCATACACTGCACATCCAGAATTGATATTAACTTTTCCTCGCTaGGCATTCTTCATCTGTTCA +
Preference number: 2 (lower is better)
Translates to: YFLSKDTVFAYTAHPELILTFPR*AFFICS
Trigger: TGAACAGATGAAGAATGCCCAGCGAGGAAAAGTTAA...TATCAATTCTGGATGTGCAGTGTATGCAAACACGGTGTCCTTGCTCAGGAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
3UTR-3UTR CCA 90 bp TATTTCCTGAGCAAGGACACCGTGTTTGCATACACTGCACATCCAGAATTGATAAGTTATGGCACAAATTaGATCCCTTGTGCCTTGAAT +
Preference number: 2 (lower is better)
Translates to: YFLSKDTVFAYTAHPELISYGTN*IPCALN
Trigger: ATTCAAGGCACAAGGGATCCAATTTGTGCCATAACT...TATCAATTCTGGATGTGCAGTGTATGCAAACACGGTGTCCTTGCTCAGGAAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445063.5
3UTR CAA 90 bp CTTTCCACTCCACTGGCACGTTACACTAACAGTGTTAATCTATCATaGCTTTCTCCTTGTTCCTCACTGTGTATTGCAAATTGGTTCAAT +
Preference number: 2 (lower is better)
Translates to: LSTPLARYTNSVNLS*LSPCSSLCIANWFN
Trigger: ATTGAACCAATTTGCAATACACAGTGAGGAACAAGGAGAAAGCAATGATAGATTAACACTGTTAGTGTAACGTGCCAGTGGAGTGGAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
3UTR CAA 90 bp ACTAATAAGTGTGCCATCCCTACAACCCTGAACATTTCTCTTTCCTaGATGAAGCAGAGAATAGTCTCATCCCTAAAAACAGAAAGTCCT +
Preference number: 2 (lower is better)
Translates to: TNKCAIPTTLNISLS*MKQRIVSSLKTESP
Trigger: AGGACTTTCTGTTTTTAGGGATGAGACTATTCTCTGCTTCATCAAGGAAAGAGAAATGTTCAGGGTTGTAGGGATGGCACACTTATTAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
3UTR CAA 90 bp CCCTTGTGCCTTGAATGGTTTTACTATAATCAAGCACACCATCCATaGATCCAGAAGGGGTATCATCAACATGATAAATTCTTTCTCTCC +
Preference number: 2 (lower is better)
Translates to: PLCLEWFYYNQAHHP*IQKGYHQHDKFFLS
Trigger: GGAGAGAAAGAATTTATCATGTTGATGATACCCCTTCTGGATCAATGGATGGTGTGCTTGATTATAGTAAAACCATTCAAGGCACAAGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445063.5
3UTR-3UTR TCA 90 bp AAGTCTGAGGAGTCAACAGGTGATTCTAGAACTAAAGCAAATGAAAGTGCAACCCCATCGCCTCACTTCTaGAAATACAATAAAGAAGAC +
Preference number: 2 (lower is better)
Translates to: KSEESTGDSRTKANESATPSPHF*KYNKED
Trigger: GTCTTCTTTATTGTATTTTCAGAAGTGAGGCGATGG...GGTTGCACTTTCATTTGCTTTAGTTCTAGAATCACCTGTTGACTCCTCAGACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
3UTR-3UTR TCA 90 bp ATGATGCTGTCTTCAATATACTACCTAATTCTGTTTATGCAACTTCTCACCAGGAAGGGGCTAGAGGCATaGCAATCGAATGAATTCTCA +
Preference number: 2 (lower is better)
Translates to: MMLSSIYYLILFMQLLTRKGLEA*QSNEFS
Trigger: TGAGAATTCATTCGATTGTCATGCCTCTAGCCCCTT...CCTGGTGAGAAGTTGCATAAACAGAATTAGGTAGTATATTGAAGACAGCATCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
3UTR-3UTR TCA 90 bp AGGAGTCAACAGGTGATTCTAGAACTAAAGCAAATGAAAGTGCAACCAACAAATAAGGGGCTAGAGGCATaGCAATCGAATGAATTCTCA +
Preference number: 2 (lower is better)
Translates to: RSQQVILELKQMKVQPTNKGLEA*QSNEFS
Trigger: TGAGAATTCATTCGATTGTCATGCCTCTAGCCCCTT...ATTTGTTGGTTGCACTTTCATTTGCTTTAGTTCTAGAATCACCTGTTGACTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
3UTR-3UTR TCA 90 bp ATGATGCTGTCTTCAATATACTACCTAATTCTGTTTATGCAACTTCTCACCAGGAGAATTAGGGGGAAATaGGAAGCCTCCAAAAGAGAG +
Preference number: 2 (lower is better)
Translates to: MMLSSIYYLILFMQLLTRRIRGK*EASKRE
Trigger: CTCTCTTTTGGAGGCTTCTCATTTCCCCCTAATTCT...CCTGGTGAGAAGTTGCATAAACAGAATTAGGTAGTATATTGAAGACAGCATCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
3UTR-3UTR GCA 90 bp CTTGTTAGGCACACTGCTTATTTGTACAGCTTTATCAGTCAGTTCCATCATTTCAGTCCTGTGGAAAGATaGAAGTTCAACAGGAGATGT +
Preference number: 2 (lower is better)
Translates to: LVRHTAYLYSFISQFHHFSPVER*KFNRRC
Trigger: ACATCTCCTGTTGAACTTGCATCTTTCCACAGGACT...GAAATGATGGAACTGACTGATAAAGCTGTACAAATAAGCAGTGTGCCTAACAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
3UTR-3UTR GCA 90 bp AATCAGGATTATCTTTGGCCCACTTCATATCCCAGACATCTCTTCGTTCCAATTCTGATTAATTTCCAATaGTGTGAGCTTCTTTGCCAC +
Preference number: 2 (lower is better)
Translates to: NQDYLWPTSYPRHLFVPILINFQ*CELLCH
Trigger: GTGGCAAAGAAGCTCACAGCATTGGAAATTAATCAG...AATTGGAACGAAGAGATGTCTGGGATATGAAGTGGGCCAAAGATAATCCTGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445063.5
3UTR-3UTR CCA 90 bp AAGTCTGAGGAGTCAACAGGTGATTCTAGAACTAAAGCAAATGAAAGTGCAACCAATAGTGCAAAGGTCTaGTCTTTAGCCACAAAATGG +
Preference number: 2 (lower is better)
Translates to: KSEESTGDSRTKANESATNSAKV*SLATKW
Trigger: CCATTTTGTGGCTAAAGACCAGACCTTTGCACTATT...GGTTGCACTTTCATTTGCTTTAGTTCTAGAATCACCTGTTGACTCCTCAGACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
3UTR-3UTR TCA 90 bp CTTGTTAGGCACACTGCTTATTTGTACAGCTTTATCAGTCAGTTCCATCATTTCACAAAAGAGAGAGGGTaGGAGAAAACATGGTTGATT +
Preference number: 2 (lower is better)
Translates to: LVRHTAYLYSFISQFHHFTKERG*EKTWLI
Trigger: AATCAACCATGTTTTCTCTCACCCTCTCTCTTTTGT...GAAATGATGGAACTGACTGATAAAGCTGTACAAATAAGCAGTGTGCCTAACAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
3UTR-3UTR CCA 90 bp ATGATGCTGTCTTCAATATACTACCTAATTCTGTTTATGCAACTTCTCACCAGGCCTGGAATAATTCGTTaGTGGGAAAATTCTAGGGCT +
Preference number: 2 (lower is better)
Translates to: MMLSSIYYLILFMQLLTRPGIIR*WENSRA
Trigger: AGCCCTAGAATTTTCCCACCAACGAATTATTCCAGG...CCTGGTGAGAAGTTGCATAAACAGAATTAGGTAGTATATTGAAGACAGCATCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
3UTR CAA 90 bp GCTTATTTGTACAGCTTTATCAGTCAGTTCCATCATTTCAATATTTaGGCCCACCACACCACTTTGAAACATGTAATGAAGGGCAAGTTT +
Preference number: 2 (lower is better)
Translates to: AYLYSFISQFHHFNI*AHHTTLKHVMKGKF
Trigger: AAACTTGCCCTTCATTACATGTTTCAAAGTGGTGTGGTGGGCCAAAATATTGAAATGATGGAACTGACTGATAAAGCTGTACAAATAAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
3UTR CAA 90 bp AAGCATGTCAACATTACTGTGTTGCTTGTTAGGCACACTGCTTATTaGTACAGCTTTATCAGTCAGTTCCATCATTTCAATATTTTGGCC +
Preference number: 2 (lower is better)
Translates to: KHVNITVLLVRHTAY*YSFISQFHHFNILA
Trigger: GGCCAAAATATTGAAATGATGGAACTGACTGATAAAGCTGTACAAATAAGCAGTGTGCCTAACAAGCAACACAGTAATGTTGACATGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
3UTR-3UTR GCA 90 bp CTTGTTAGGCACACTGCTTATTTGTACAGCTTTATCAGTCAGTTCCATCATTTCGTGTTAATCTATCATTaGTTTCTCCTTGTTCCTCAC +
Preference number: 2 (lower is better)
Translates to: LVRHTAYLYSFISQFHHFVLIYH*FLLVPH
Trigger: GTGAGGAACAAGGAGAAAGCAATGATAGATTAACAC...GAAATGATGGAACTGACTGATAAAGCTGTACAAATAAGCAGTGTGCCTAACAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
3UTR-3UTR CCA 90 bp ATGATGCTGTCTTCAATATACTACCTAATTCTGTTTATGCAACTTCTCACCAGGAACTTAGGATCTACCTaGAATAATTCGTTGGTGGGA +
Preference number: 2 (lower is better)
Translates to: MMLSSIYYLILFMQLLTRNLGST*NNSLVG
Trigger: TCCCACCAACGAATTATTCCAGGTAGATCCTAAGTT...CCTGGTGAGAAGTTGCATAAACAGAATTAGGTAGTATATTGAAGACAGCATCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
3UTR CAA 90 bp CATGCTGAACTTGTCTCTGTCTCTACAAGACAAAAACATATGAGATaGAGAAAGTGTATTGTAGCTGCAAAAACAAAGTTGCGTATCTCT +
Preference number: 2 (lower is better)
Translates to: HAELVSVSTRQKHMR*RKCIVAAKTKLRIS
Trigger: AGAGATACGCAACTTTGTTTTTGCAGCTACAATACACTTTCTCAATCTCATATGTTTTTGTCTTGTAGAGACAGAGACAAGTTCAGCATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
3UTR CAA 90 bp GAAATTAGCATTTGTGAATTAAGCATGTCAACATTACTGTGTTGCTaGTTAGGCACACTGCTTATTTGTACAGCTTTATCAGTCAGTTCC +
Preference number: 2 (lower is better)
Translates to: EISICELSMSTLLCC*LGTLLICTALSVSS
Trigger: GGAACTGACTGATAAAGCTGTACAAATAAGCAGTGTGCCTAACAAGCAACACAGTAATGTTGACATGCTTAATTCACAAATGCTAATTTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
3UTR-3UTR CAA 90 bp TCCCAAAGGCTCTGCTGGCGCATGCGCAGAGTGCTAGCAGAGAGTAGATCTCCAAACAGCTTTGTTCCATaGGTTGAGATGTACGCAGGT +
Preference number: 3 (lower is better)
Translates to: SQRLCWRMRRVLAESRSPNSFVP*VEMYAG
Trigger: ACCTGCGTACATCTCAACCAATGGAACAAAGCTGTT...TGGAGATCTACTCTCTGCTAGCACTCTGCGCATGCGCCAGCAGAGCCTTTGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414212.5
3UTR-3UTR CAA 90 bp CTCTGCTGGCGCATGCGCAGAGTGCTAGCAGAGAGTAGATCTCCACAGGAGGGAGCCAATTCAACAGCTTaGTTCCATTGGTTGAGATGT +
Preference number: 3 (lower is better)
Translates to: LCWRMRRVLAESRSPQEGANSTA*FHWLRC
Trigger: ACATCTCAACCAATGGAACAAAGCTGTTGAATTGGC...TCCCTCCTGTGGAGATCTACTCTCTGCTAGCACTCTGCGCATGCGCCAGCAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414212.5
3UTR-3UTR CAA 90 bp CCACTGGACTATGGCATAAGGGGCAGAAGCTGTAGTGGCTTATTTCCTGAGCAACTGTGGCAACGCATGTaGGCAGTTTCCCTTCTCCAC +
Preference number: 3 (lower is better)
Translates to: PLDYGIRGRSCSGLFPEQLWQRM*AVSLLH
Trigger: GTGGAGAAGGGAAACTGCCAACATGCGTTGCCACAG...TTGCTCAGGAAATAAGCCACTACAGCTTCTGCCCCTTATGCCATAGTCCAGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
3UTR-3UTR CAA 90 bp TCTGCATCACCAGATCCAGTTTTCAGGAGCTGGAGTACTCTAAACCAATCCCCCCTGTGGCAACGCATGTaGGCAGTTTCCCTTCTCCAC +
Preference number: 3 (lower is better)
Translates to: SASPDPVFRSWSTLNQSPLWQRM*AVSLLH
Trigger: GTGGAGAAGGGAAACTGCCAACATGCGTTGCCACAG...GGGGGATTGGTTTAGAGTACTCCAGCTCCTGAAAACTGGATCTGGTGATGCAGA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000445063.5
3UTR-3UTR CAA 90 bp TGGCTTGTTCCAGGAGACTGTCATCTGCATCACCAGATCCAGTTTTCAGGAGCTCAACTCTCCAACTACTaGCTGTCCCGTACTGTCCGT +
Preference number: 3 (lower is better)
Translates to: WLVPGDCHLHHQIQFSGAQLSNY*LSRTVR
Trigger: ACGGACAGTACGGGACAGCAAGTAGTTGGAGAGTTG...AGCTCCTGAAAACTGGATCTGGTGATGCAGATGACAGTCTCCTGGAACAAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445063.5
3UTR GCA 72 bp TGCAGTGTCCACACATCCCTCATAGAGCTGCCTCTGTaGAAGTATAAAGAAGTGGTAAGCCTCTGCCCCTCT +
Preference number: 3 (lower is better)
Translates to: CSVHTSLIELPL*KYKEVVSLCPS
Trigger: AGAGGGGCAGAGGCTTACCACTTCTTTATACTTGCACAGAGGCAGCTCTATGAGGGATGTGTGGACACTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
3UTR CCA 72 bp ATACTCAGTGATTGGGCTTCCTGTGGCAACGCATGTTaGCAGTTTCCCTTCTCCACCTTCCATAAGGCTGTC +
Preference number: 3 (lower is better)
Translates to: ILSDWASCGNAC*QFPFSTFHKAV
Trigger: GACAGCCTTATGGAAGGTGGAGAAGGGAAACTGCCAACATGCGTTGCCACAGGAAGCCCAATCACTGAGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414212.5
3UTR CCA 72 bp ATACTCAGTGATTGGGCTTCCTGTGGCAACGCATGTTaGCAGTTTCCCTTCTCCACTGTCTTCAGTGCAGTG +
Preference number: 3 (lower is better)
Translates to: ILSDWASCGNAC*QFPFSTVFSAV
Trigger: CACTGCACTGAAGACAGTGGAGAAGGGAAACTGCCAACATGCGTTGCCACAGGAAGCCCAATCACTGAGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445063.5
3UTR TCA 72 bp ACAAATGCTTGCTCTGCAGTGTATAGATCCAGTTTCTaGAGAGCTGCTTCAGCCAGTAGGCGCCAAAGTCGG +
Preference number: 3 (lower is better)
Translates to: TNACSAVYRSSF*RAASASRRQSR
Trigger: CCGACTTTGGCGCCTACTGGCTGAAGCAGCTCTTCAGAAACTGGATCTATACACTGCAGAGCAAGCATTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445063.5
3UTR CCA 72 bp GCATACACTGCACATCCAGAATTGATACTCAGTGATTaGGCTTCCTGTGGCAACGCATGTTGGCAGTTTCCC +
Preference number: 3 (lower is better)
Translates to: AYTAHPELILSD*ASCGNACWQFP
Trigger: GGGAAACTGCCAACATGCGTTGCCACAGGAAGCCCAATCACTGAGTATCAATTCTGGATGTGCAGTGTATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
3UTR CCA 72 bp CTGTCATCTGCATCACCAGATCCAGTTTTCAGGAGCTaGAGTACTCTAAACCAATCCCCCAATTTCAGCCGG +
Preference number: 3 (lower is better)
Translates to: LSSASPDPVFRS*STLNQSPNFSR
Trigger: CCGGCTGAAATTGGGGGATTGGTTTAGAGTACTCCAGCTCCTGAAAACTGGATCTGGTGATGCAGATGACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445063.5
3UTR-3UTR CAA 90 bp TTGATACTCAGTGATTGGGCTTCCTGTGGCAACGCATGTTGGCAGTTTCCCTTCCAAGCACACCATCCATaGATCCAGAAGGGGTATCAT +
Preference number: 3 (lower is better)
Translates to: LILSDWASCGNACWQFPFQAHHP*IQKGYH
Trigger: ATGATACCCCTTCTGGATCAATGGATGGTGTGCTTG...GAAGGGAAACTGCCAACATGCGTTGCCACAGGAAGCCCAATCACTGAGTATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445063.5
3UTR TCA 72 bp AGGACACCGTGTTTGCATACACTGCACATCCAGAATTaGTACTCAGTGATTGGGCTTCCTGTGGCAACGCAT +
Preference number: 3 (lower is better)
Translates to: RTPCLHTLHIQN*YSVIGLPVATH
Trigger: ATGCGTTGCCACAGGAAGCCCAATCACTGAGTATCAATTCTGGATGTGCAGTGTATGCAAACACGGTGTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
3UTR-3UTR CAA 90 bp GTCCTGCAGGAACCTTTCAGACAGGCAGAACTAATAAGTGTGCCATCCCTACAATCTCTAAATTCAACTTaGCCCCACTCCCATGCTTCC +
Preference number: 3 (lower is better)
Translates to: VLQEPFRQAELISVPSLQSLNST*PHSHAS
Trigger: GGAAGCATGGGAGTGGGGCAAAGTTGAATTTAGAGA...TTGTAGGGATGGCACACTTATTAGTTCTGCCTGTCTGAAAGGTTCCTGCAGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
3UTR-3UTR CAA 90 bp GAGCTGTCTTCAGTGCAGTGTCCACACATCCCTCATAGAGCTGCCTCTGTGCAATACTGCTGCCTTTGGTaGACTACATTTCAAAAATGC +
Preference number: 3 (lower is better)
Translates to: ELSSVQCPHIPHRAASVQYCCLW*TTFQKC
Trigger: GCATTTTTGAAATGTAGTCAACCAAAGGCAGCAGTA...TTGCACAGAGGCAGCTCTATGAGGGATGTGTGGACACTGCACTGAAGACAGCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414212.5
3UTR-3UTR CAA 90 bp CCACTGGACTATGGCATAAGGGGCAGAAGCTGTAGTGGCTTATTTCCTGAGCAACAGTTATGGCACAAATaGGATCCCTTGTGCCTTGAA +
Preference number: 3 (lower is better)
Translates to: PLDYGIRGRSCSGLFPEQQLWHK*DPLCLE
Trigger: TTCAAGGCACAAGGGATCCAATTTGTGCCATAACTG...TTGCTCAGGAAATAAGCCACTACAGCTTCTGCCCCTTATGCCATAGTCCAGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445063.5
3UTR-3UTR CAA 90 bp GTCCTGCAGGAACCTTTCAGACAGGCAGAACTAATAAGTGTGCCATCCCTACAATGCAACATGCTGAACTaGTCTCTGTCTCTACAAGAC +
Preference number: 3 (lower is better)
Translates to: VLQEPFRQAELISVPSLQCNMLN*SLSLQD
Trigger: GTCTTGTAGAGACAGAGACAAGTTCAGCATGTTGCA...TTGTAGGGATGGCACACTTATTAGTTCTGCCTGTCTGAAAGGTTCCTGCAGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
3UTR-3UTR CAA 90 bp GCCTCAGGCACATTTCATCTGATTGAGTCATCTGGCTCAAGCGGCCACTCTGGTAGTGTTAATCTATCATaGCTTTCTCCTTGTTCCTCA +
Preference number: 3 (lower is better)
Translates to: ASGTFHLIESSGSSGHSGSVNLS*LSPCSS
Trigger: TGAGGAACAAGGAGAAAGCAATGATAGATTAACACT...ACCAGAGTGGCCGCTTGAGCCAGATGACTCAATCAGATGAAATGTGCCTGAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
3UTR-3UTR CAA 90 bp AAGAGCTGTCTTCAGTGCAGTGTCCACACATCCCTCATAGAGCTGCCTCTGTGCTATCTACTGCTGCCTTaGGTTGACTACATTTCAAAA +
Preference number: 3 (lower is better)
Translates to: KSCLQCSVHTSLIELPLCYLLLP*VDYISK
Trigger: TTTTGAAATGTAGTCAACCAAAGGCAGCAGTAGATA...GCACAGAGGCAGCTCTATGAGGGATGTGTGGACACTGCACTGAAGACAGCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414212.5
3UTR-3UTR CAA 90 bp GCAGAAGTGGCCTCTGAACTTTTTCCTTTAACTTTTCCTCGCTGGGCATTCTTCAATGGCATTGTTGGCTaGTTCCAGGAGACTGTCATC +
Preference number: 3 (lower is better)
Translates to: AEVASELFPLTFPRWAFFNGIVG*FQETVI
Trigger: GATGACAGTCTCCTGGAACAAGCCAACAATGCCATT...GAAGAATGCCCAGCGAGGAAAAGTTAAAGGAAAAAGTTCAGAGGCCACTTCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445063.5
3UTR TCA 72 bp AGAGTGCTAGCAGAGAGTAGATCTCCACAGGAGGGATaGTGTCTTCATAGTCTTTCAGGTGAAGAGCTGTCT +
Preference number: 3 (lower is better)
Translates to: RVLAESRSPQEG*CLHSLSGEELS
Trigger: AGACAGCTCTTCACCTGAAAGACTATGAAGACATCATCCCTCCTGTGGAGATCTACTCTCTGCTAGCACTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414212.5
3UTR GCA 72 bp CTGCCTCTGTGCAAGTATAAAGAAGTGGTAAGCCTCTaGCCCTCTCCATGCATTATCTGTGAAACGATCTGT +
Preference number: 3 (lower is better)
Translates to: LPLCKYKEVVSL*PSPCIICETIC
Trigger: ACAGATCGTTTCACAGATAATGCATGGAGAGGGGCAGAGGCTTACCACTTCTTTATACTTGCACAGAGGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
3UTR GCA 72 bp CCATCTCGAGATACGTTCTTTCAGCCTCTTCAAACCTaGCGAAGTAGCCAACAACTTCAGCCTGTTTCATTG +
Preference number: 3 (lower is better)
Translates to: PSRDTFFQPLQT*RSSQQLQPVSL
Trigger: CAATGAAACAGGCTGAAGTTGTTGGCTACTTCGGCAGGTTTGAAGAGGCTGAAAGAACGTATCTCGAGATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445063.5
3UTR CCA 72 bp ACCCAGGATTCAGGTGTTGCGGTCTTTCCACTCCACTaGCACGTTACACTAACAGTGTTAATCTATCATTGC +
Preference number: 3 (lower is better)
Translates to: TQDSGVAVFPLH*HVTLTVLIYHC
Trigger: GCAATGATAGATTAACACTGTTAGTGTAACGTGCCAGTGGAGTGGAAAGACCGCAACACCTGAATCCTGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
3UTR-3UTR CAA 90 bp GTCCTGCAGGAACCTTTCAGACAGGCAGAACTAATAAGTGTGCCATCCCTACAAATCATTGCTTTCTCCTaGTTCCTCACTGTGTATTGC +
Preference number: 3 (lower is better)
Translates to: VLQEPFRQAELISVPSLQIIAFS*FLTVYC
Trigger: GCAATACACAGTGAGGAACAAGGAGAAAGCAATGAT...TTGTAGGGATGGCACACTTATTAGTTCTGCCTGTCTGAAAGGTTCCTGCAGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
3UTR-3UTR CAA 90 bp AGAGTAGATCTCCACAGGAGGGATGATGTCTTCATAGTCTTTCAGGTGAAGAGCGCTTTGTTCCATTGGTaGAGATGTACGCAGGTATCT +
Preference number: 3 (lower is better)
Translates to: RVDLHRRDDVFIVFQVKSALFHW*RCTQVS
Trigger: AGATACCTGCGTACATCTCAACCAATGGAACAAAGC...GCTCTTCACCTGAAAGACTATGAAGACATCATCCCTCCTGTGGAGATCTACTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414212.5
3UTR-3UTR CAA 90 bp AGCCTCTGCCCCTCTCCATGCATTATCTGTGAAACGATCTGTTGTAGACAGAACCTTTGCCACACGATATaGCCAGGTATAAAATGCTTC +
Preference number: 3 (lower is better)
Translates to: SLCPSPCIICETICCRQNLCHTI*PGIKCF
Trigger: GAAGCATTTTATACCTGGCAATATCGTGTGGCAAAG...GTTCTGTCTACAACAGATCGTTTCACAGATAATGCATGGAGAGGGGCAGAGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445063.5
3UTR-3UTR CAA 90 bp GGCAGAAGCTGTAGTGGCTTATTTCCTGAGCAAGGACACCGTGTTTGCATACACTGGATCCCTTGTGCCTaGAATGGTTTTACTATAATC +
Preference number: 3 (lower is better)
Translates to: GRSCSGLFPEQGHRVCIHWIPCA*NGFTII
Trigger: GATTATAGTAAAACCATTCAAGGCACAAGGGATCCA...GTGTATGCAAACACGGTGTCCTTGCTCAGGAAATAAGCCACTACAGCTTCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445063.5
3UTR-3UTR CAA 90 bp CAGCATTCAACCACTTTTGTCGATCAGCAAAGTAGTCTCCAATGGCATTGTTGGGCAAGACGGCTAGAGTaGCAATTCAAGGATAACTGG +
Preference number: 3 (lower is better)
Translates to: QHSTTFVDQQSSLQWHCWARRLE*QFKDNW
Trigger: CCAGTTATCCTTGAATTGCAACTCTAGCCGTCTTGC...CCAACAATGCCATTGGAGACTACTTTGCTGATCGACAAAAGTGGTTGAATGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445063.5
3UTR-3UTR CAA 90 bp CTTTTGTCGATCAGCAAAGTAGTCTCCAATGGCATTGTTGGCTTGTTCCAGGAGCACAAACTTAATGCCTaGGTAATCTTTGCAGCGCAC +
Preference number: 3 (lower is better)
Translates to: LLSISKVVSNGIVGLFQEHKLNA*VIFAAH
Trigger: GTGCGCTGCAAAGATTACCAAGGCATTAAGTTTGTG...CTCCTGGAACAAGCCAACAATGCCATTGGAGACTACTTTGCTGATCGACAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445063.5
3UTR TCA 72 bp CGCCAAAGTCGGGGGTGTGGATTGTCCTCTATGAACTaGGATGCATCTTTAATTCCAACCTTCTCAATCAGT +
Preference number: 3 (lower is better)
Translates to: RQSRGCGLSSMN*DASLIPTFSIS
Trigger: ACTGATTGAGAAGGTTGGAATTAAAGATGCATCTCAGTTCATAGAGGACAATCCACACCCCCGACTTTGGCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445063.5
3UTR CCA 72 bp TCAACCACTTTTGTCGATCAGCAAAGTAGTCTCCAATaGCATTGTTGGCTTGTTCCAGGAGACTGTCATCTG +
Preference number: 3 (lower is better)
Translates to: STTFVDQQSSLQ*HCWLVPGDCHL
Trigger: CAGATGACAGTCTCCTGGAACAAGCCAACAATGCCATTGGAGACTACTTTGCTGATCGACAAAAGTGGTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445063.5
3UTR-3UTR CAA 90 bp AGCCTCTGCCCCTCTCCATGCATTATCTGTGAAACGATCTGTTGTAGACAGAACGTTTACTTCCTTTCTTaGCCTCTTCATCTGCAATCT +
Preference number: 3 (lower is better)
Translates to: SLCPSPCIICETICCRQNVYFLS*PLHLQS
Trigger: AGATTGCAGATGAAGAGGCAAAGAAAGGAAGTAAAC...GTTCTGTCTACAACAGATCGTTTCACAGATAATGCATGGAGAGGGGCAGAGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414212.5
3UTR TCA 72 bp CTACCATTGTACCAAGGTAATTTTCCACGAGGCGCATaGATAGAGACAGAGACCTCAAAGACTTCTGGTCTT +
Preference number: 3 (lower is better)
Translates to: LPLYQGNFPRGA*IETETSKTSGL
Trigger: AAGACCAGAAGTCTTTGAGGTCTCTGTCTCTATTCATGCGCCTCGTGGAAAATTACCTTGGTACAATGGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
3UTR GCA 72 bp GACATAAAAACATTACAAAACCCAGGATTCAGGTGTTaGGGTCTTTCCACTCCACTGGCACGTTACACTAAC +
Preference number: 3 (lower is better)
Translates to: DIKTLQNPGFRC*GLSTPLARYTN
Trigger: GTTAGTGTAACGTGCCAGTGGAGTGGAAAGACCGCAACACCTGAATCCTGGGTTTTGTAATGTTTTTATGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
3UTR GCA 72 bp CTGAGATGCATCTTTAATTCCAACCTTCTCAATCAGTaGTCGGCTATCTCGCAGAGACCGAATCTCAAAGTT +
Preference number: 3 (lower is better)
Translates to: LRCIFNSNLLNQ*SAISQRPNLKV
Trigger: AACTTTGAGATTCGGTCTCTGCGAGATAGCCGAGCACTGATTGAGAAGGTTGGAATTAAAGATGCATCTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445063.5
3UTR-3UTR CAA 90 bp CTTGTTAGGCACACTGCTTATTTGTACAGCTTTATCAGTCAGTTCCATCATTTCGCCCACCACACCACTTaGAAACATGTAATGAAGGGC +
Preference number: 3 (lower is better)
Translates to: LVRHTAYLYSFISQFHHFAHHTT*KHVMKG
Trigger: GCCCTTCATTACATGTTTCAAAGTGGTGTGGTGGGC...GAAATGATGGAACTGACTGATAAAGCTGTACAAATAAGCAGTGTGCCTAACAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
3UTR-3UTR CAA 90 bp AATATTGTACAGCATTCAACCACTTTTGTCGATCAGCAAAGTAGTCTCCAATGGGACTCACTCAGTAGTTaGCCCAAGCGCTTCACAAAC +
Preference number: 3 (lower is better)
Translates to: NIVQHSTTFVDQQSSLQWDSLSS*PKRFTN
Trigger: GTTTGTGAAGCGCTTGGGCAAACTACTGAGTGAGTC...CCATTGGAGACTACTTTGCTGATCGACAAAAGTGGTTGAATGCTGTACAATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445063.5
3UTR GCA 72 bp GTTCCATTGGTTGAGATGTACGCAGGTATCTACTGCTaGCTTTGGTTGACTACATTTCAAAAATGCAGTCAC +
Preference number: 3 (lower is better)
Translates to: VPLVEMYAGIYC*LWLTTFQKCSH
Trigger: GTGACTGCATTTTTGAAATGTAGTCAACCAAAGGCAGCAGTAGATACCTGCGTACATCTCAACCAATGGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414212.5
3UTR GCA 72 bp AAGTATAAAGAAGTGGTAAGCCTCTGCCCCTCTCCATaGATTATCTGTGAAACGATCTGTTGTAGACAGAAC +
Preference number: 3 (lower is better)
Translates to: KYKEVVSLCPSP*IICETICCRQN
Trigger: GTTCTGTCTACAACAGATCGTTTCACAGATAATGCATGGAGAGGGGCAGAGGCTTACCACTTCTTTATACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
3UTR CCA 72 bp TTGGTTGAGATGTACGCAGGTATCTACTGCTGCCTTTaGTTGACTACATTTCAAAAATGCAGTCACTGCTTG +
Preference number: 3 (lower is better)
Translates to: LVEMYAGIYCCL*LTTFQKCSHCL
Trigger: CAAGCAGTGACTGCATTTTTGAAATGTAGTCAACCAAAGGCAGCAGTAGATACCTGCGTACATCTCAACCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414212.5
3UTR-3UTR CAA 90 bp CTTGTTAGGCACACTGCTTATTTGTACAGCTTTATCAGTCAGTTCCATCATTTCTCTCTAAATTCAACTTaGCCCCACTCCCATGCTTCC +
Preference number: 3 (lower is better)
Translates to: LVRHTAYLYSFISQFHHFSLNST*PHSHAS
Trigger: GGAAGCATGGGAGTGGGGCAAAGTTGAATTTAGAGA...GAAATGATGGAACTGACTGATAAAGCTGTACAAATAAGCAGTGTGCCTAACAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
3UTR TCA 72 bp ATTCTTTCTCTCCCTTCTTTTCGAGACCGTGTGATCTaGTTAATTTCCAATGCTGTGAGCTTCTTTGCCACA +
Preference number: 3 (lower is better)
Translates to: ILSLPSFRDRVI*LISNAVSFFAT
Trigger: TGTGGCAAAGAAGCTCACAGCATTGGAAATTAATCAGATCACACGGTCTCGAAAAGAAGGGAGAGAAAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445063.5
3UTR-3UTR CAA 90 bp AAGTCTGAGGAGTCAACAGGTGATTCTAGAACTAAAGCAAATGAAAGTGCAACCGCGTATCTCTATGTATaGCCTCTACTATATGTAAGC +
Preference number: 3 (lower is better)
Translates to: KSEESTGDSRTKANESATAYLYV*PLLYVS
Trigger: GCTTACATATAGTAGAGGCAATACATAGAGATACGC...GGTTGCACTTTCATTTGCTTTAGTTCTAGAATCACCTGTTGACTCCTCAGACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
3UTR GCA 72 bp TTTGTTCCATTGGTTGAGATGTACGCAGGTATCTACTaGTGCCTTTGGTTGACTACATTTCAAAAATGCAGT +
Preference number: 3 (lower is better)
Translates to: FVPLVEMYAGIY*CLWLTTFQKCS
Trigger: ACTGCATTTTTGAAATGTAGTCAACCAAAGGCAGCAGTAGATACCTGCGTACATCTCAACCAATGGAACAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414212.5
3UTR-3UTR CAA 90 bp AAGTCTGAGGAGTCAACAGGTGATTCTAGAACTAAAGCAAATGAAAGTGCAACCGTTCCTCACTGTGTATaGCAAATTGGTTCAATAAAC +
Preference number: 3 (lower is better)
Translates to: KSEESTGDSRTKANESATVPHCV*QIGSIN
Trigger: GTTTATTGAACCAATTTGCAATACACAGTGAGGAAC...GGTTGCACTTTCATTTGCTTTAGTTCTAGAATCACCTGTTGACTCCTCAGACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
3UTR-3UTR CAA 90 bp ATGATGCTGTCTTCAATATACTACCTAATTCTGTTTATGCAACTTCTCACCAGGATCATTGCTTTCTCCTaGTTCCTCACTGTGTATTGC +
Preference number: 3 (lower is better)
Translates to: MMLSSIYYLILFMQLLTRIIAFS*FLTVYC
Trigger: GCAATACACAGTGAGGAACAAGGAGAAAGCAATGAT...CCTGGTGAGAAGTTGCATAAACAGAATTAGGTAGTATATTGAAGACAGCATCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
3UTR TCA 72 bp CTTCTCATAGCTCACTATTCCCAATCTGCAACATGCTaGACTTGTCTCTGTCTCTACAAGACAAAAACATAT +
Preference number: 3 (lower is better)
Translates to: LLIAHYSQSATC*TCLCLYKTKTY
Trigger: ATATGTTTTTGTCTTGTAGAGACAGAGACAAGTTCAGCATGTTGCAGATTGGGAATAGTGAGCTATGAGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
3UTR-3UTR CAA 90 bp ATGATGCTGTCTTCAATATACTACCTAATTCTGTTTATGCAACTTCTCACCAGGGCGTATCTCTATGTATaGCCTCTACTATATGTAAGC +
Preference number: 3 (lower is better)
Translates to: MMLSSIYYLILFMQLLTRAYLYV*PLLYVS
Trigger: GCTTACATATAGTAGAGGCAATACATAGAGATACGC...CCTGGTGAGAAGTTGCATAAACAGAATTAGGTAGTATATTGAAGACAGCATCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
3UTR-3UTR CAA 90 bp TTTCTGATTTGGGGAAATTTCCCATTCTGGTATAGAACAAATGAGAAAGCTGGAGTTCCTCACTGTGTATaGCAAATTGGTTCAATAAAC +
Preference number: 3 (lower is better)
Translates to: FLIWGNFPFWYRTNEKAGVPHCV*QIGSIN
Trigger: GTTTATTGAACCAATTTGCAATACACAGTGAGGAAC...TCCAGCTTTCTCATTTGTTCTATACCAGAATGGGAAATTTCCCCAAATCAGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
3UTR GCA 72 bp AGCATTTGTGAATTAAGCATGTCAACATTACTGTGTTaGTTGTTAGGCACACTGCTTATTTGTACAGCTTTA +
Preference number: 3 (lower is better)
Translates to: SICELSMSTLLC*LLGTLLICTAL
Trigger: TAAAGCTGTACAAATAAGCAGTGTGCCTAACAAGCAACACAGTAATGTTGACATGCTTAATTCACAAATGCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
3UTR TCA 72 bp TTGAATGGTTTTACTATAATCAAGCACACCATCCATTaGTCCAGAAGGGGTATCATCAACATGATAAATTCT +
Preference number: 3 (lower is better)
Translates to: LNGFTIIKHTIH*SRRGIINMINS
Trigger: AGAATTTATCATGTTGATGATACCCCTTCTGGATCAATGGATGGTGTGCTTGATTATAGTAAAACCATTCAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445063.5
3UTR TCA 72 bp ACACAAGACTGTGATCATATTAAAGTAGTAAGAATGTaGCTGACTTTTCCTCCTCCATTTTCAAGCATTCTA +
Preference number: 3 (lower is better)
Translates to: TQDCDHIKVVRM*LTFPPPFSSIL
Trigger: TAGAATGCTTGAAAATGGAGGAGGAAAAGTCAGTCACATTCTTACTACTTTAATATGATCACAGTCTTGTGT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453014.1
CDS-3UTR GCA 90 bp TTGAACAAGTCCCAAAGGCTCTGCTGGCGCATGCGCAGAGTGCTAGCAGAGAGTTTTGTCCTGCATGGCTaGCTTCTGGAAGCCTGCCAC +
Preference number: 4 (lower is better)
Translates to: LNKSQRLCWRMRRVLAESFVLHG*LLEACH
Trigger: GTGGCAGGCTTCCAGAAGGCAGCCATGCAGGACAAA...ACTCTCTGCTAGCACTCTGCGCATGCGCCAGCAGAGCCTTTGGGACTTGTTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414212.5
CDS-3UTR TCA 90 bp CTCTGCTGGCGCATGCGCAGAGTGCTAGCAGAGAGTAGATCTCCACAGGAGGGAAAGCACACCATCCATTaGTCCAGAAGGGGTATCATC +
Preference number: 4 (lower is better)
Translates to: LCWRMRRVLAESRSPQEGKHTIH*SRRGII
Trigger: GATGATACCCCTTCTGGATCAATGGATGGTGTGCTT...TCCCTCCTGTGGAGATCTACTCTCTGCTAGCACTCTGCGCATGCGCCAGCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414212.5
CDS-3UTR GCA 90 bp GCCTCAGGCACATTTCATCTGATTGAGTCATCTGGCTCAAGCGGCCACTCTGGTTTTGTCCTGCATGGCTaGCTTCTGGAAGCCTGCCAC +
Preference number: 4 (lower is better)
Translates to: ASGTFHLIESSGSSGHSGFVLHG*LLEACH
Trigger: GTGGCAGGCTTCCAGAAGGCAGCCATGCAGGACAAA...ACCAGAGTGGCCGCTTGAGCCAGATGACTCAATCAGATGAAATGTGCCTGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR GCA 90 bp CTCTGCTGGCGCATGCGCAGAGTGCTAGCAGAGAGTAGATCTCCACAGGAGGGACAGCGCACAAATGCTTaGTCTGCAGTGTATAGATCC +
Preference number: 4 (lower is better)
Translates to: LCWRMRRVLAESRSPQEGQRTNA*SAVYRS
Trigger: GGATCTATACACTGCAGAGCAAGCATTTGTGCGCTG...TCCCTCCTGTGGAGATCTACTCTCTGCTAGCACTCTGCGCATGCGCCAGCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414212.5
CDS-3UTR CCA 90 bp GCCTCAGGCACATTTCATCTGATTGAGTCATCTGGCTCAAGCGGCCACTCTGGTGGTAGAAGAACATCGTaGGATCCCCGAGAGGGTCAC +
Preference number: 4 (lower is better)
Translates to: ASGTFHLIESSGSSGHSGGRRTS*DPREGH
Trigger: GTGACCCTCTCGGGGATCCCACGATGTTCTTCTACC...ACCAGAGTGGCCGCTTGAGCCAGATGACTCAATCAGATGAAATGTGCCTGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CCA 90 bp GCCTCAGGCACATTTCATCTGATTGAGTCATCTGGCTCAAGCGGCCACTCTGGTAACACGCTGCCCATGTaGTTCCACTGGATGCCTACT +
Preference number: 4 (lower is better)
Translates to: ASGTFHLIESSGSSGHSGNTLPM*FHWMPT
Trigger: AGTAGGCATCCAGTGGAACCACATGGGCAGCGTGTT...ACCAGAGTGGCCGCTTGAGCCAGATGACTCAATCAGATGAAATGTGCCTGAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CCA 90 bp CCACTGGACTATGGCATAAGGGGCAGAAGCTGTAGTGGCTTATTTCCTGAGCAATCCCAAAGGCTCTGCTaGCGCATGCGCAGAGTGCTA +
Preference number: 4 (lower is better)
Translates to: PLDYGIRGRSCSGLFPEQSQRLC*RMRRVL
Trigger: TAGCACTCTGCGCATGCGCCAGCAGAGCCTTTGGGA...TTGCTCAGGAAATAAGCCACTACAGCTTCTGCCCCTTATGCCATAGTCCAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414212.5
CDS-3UTR GCA 90 bp GCACATCCAGAATTGATACTCAGTGATTGGGCTTCCTGTGGCAACGCATGTTGGTTTGTCCTGCATGGCTaGCTTCTGGAAGCCTGCCAC +
Preference number: 4 (lower is better)
Translates to: AHPELILSDWASCGNACWFVLHG*LLEACH
Trigger: GTGGCAGGCTTCCAGAAGGCAGCCATGCAGGACAAA...CCAACATGCGTTGCCACAGGAAGCCCAATCACTGAGTATCAATTCTGGATGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR GCA 90 bp GCCTCAGGCACATTTCATCTGATTGAGTCATCTGGCTCAAGCGGCCACTCTGGTGAAGTGGTAAGCCTCTaGCCCTCTCCATGCATTATC +
Preference number: 4 (lower is better)
Translates to: ASGTFHLIESSGSSGHSGEVVSL*PSPCII
Trigger: GATAATGCATGGAGAGGGGCAGAGGCTTACCACTTC...ACCAGAGTGGCCGCTTGAGCCAGATGACTCAATCAGATGAAATGTGCCTGAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CCA 90 bp CTCTGCTGGCGCATGCGCAGAGTGCTAGCAGAGAGTAGATCTCCACAGGAGGGACTGGACGATCAGGTCTaGTATATGCATAAACTACAG +
Preference number: 4 (lower is better)
Translates to: LCWRMRRVLAESRSPQEGLDDQV*YMHKLQ
Trigger: CTGTAGTTTATGCATATACCAGACCTGATCGTCCAG...TCCCTCCTGTGGAGATCTACTCTCTGCTAGCACTCTGCGCATGCGCCAGCAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414212.5
CDS-3UTR TCA 90 bp CCACTGGACTATGGCATAAGGGGCAGAAGCTGTAGTGGCTTATTTCCTGAGCAAACGATTGCCATCCACTaGACCAACTATCACAGCCCC +
Preference number: 4 (lower is better)
Translates to: PLDYGIRGRSCSGLFPEQTIAIH*TNYHSP
Trigger: GGGGCTGTGATAGTTGGTTCAGTGGATGGCAATCGT...TTGCTCAGGAAATAAGCCACTACAGCTTCTGCCCCTTATGCCATAGTCCAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414212.5
CDS-3UTR TCA 90 bp GCCTCAGGCACATTTCATCTGATTGAGTCATCTGGCTCAAGCGGCCACTCTGGTAAGCACACCATCCATTaGTCCAGAAGGGGTATCATC +
Preference number: 4 (lower is better)
Translates to: ASGTFHLIESSGSSGHSGKHTIH*SRRGII
Trigger: GATGATACCCCTTCTGGATCAATGGATGGTGTGCTT...ACCAGAGTGGCCGCTTGAGCCAGATGACTCAATCAGATGAAATGTGCCTGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR GCA 90 bp GTCCTGCAGGAACCTTTCAGACAGGCAGAACTAATAAGTGTGCCATCCCTACAACCACAGCTAACACGCTaGCCATGTGGTTCCACTGGA +
Preference number: 4 (lower is better)
Translates to: VLQEPFRQAELISVPSLQPQLTR*PCGSTG
Trigger: TCCAGTGGAACCACATGGGCAGCGTGTTAGCTGTGG...TTGTAGGGATGGCACACTTATTAGTTCTGCCTGTCTGAAAGGTTCCTGCAGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR GCA 90 bp AGGTGTTGCGGTCTTTCCACTCCACTGGCACGTTACACTAACAGTGTTAATCTAAAGTCCCAAAGGCTCTaGTGGCGCATGCGCAGAGTG +
Preference number: 4 (lower is better)
Translates to: RCCGLSTPLARYTNSVNLKSQRL*WRMRRV
Trigger: CACTCTGCGCATGCGCCAGCAGAGCCTTTGGGACTT...TAGATTAACACTGTTAGTGTAACGTGCCAGTGGAGTGGAAAGACCGCAACACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR GCA 90 bp GCAGAAGTGGCCTCTGAACTTTTTCCTTTAACTTTTCCTCGCTGGGCATTCTTCAAGTCCCAAAGGCTCTaGTGGCGCATGCGCAGAGTG +
Preference number: 4 (lower is better)
Translates to: AEVASELFPLTFPRWAFFKSQRL*WRMRRV
Trigger: CACTCTGCGCATGCGCCAGCAGAGCCTTTGGGACTT...GAAGAATGCCCAGCGAGGAAAAGTTAAAGGAAAAAGTTCAGAGGCCACTTCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000414212.5
CDS-3UTR GCA 90 bp GCCTCAGGCACATTTCATCTGATTGAGTCATCTGGCTCAAGCGGCCACTCTGGTCAAGGACACCGTGTTTaGATACACTGCACATCCAGA +
Preference number: 4 (lower is better)
Translates to: ASGTFHLIESSGSSGHSGQGHRV*IHCTSR
Trigger: TCTGGATGTGCAGTGTATGCAAACACGGTGTCCTTG...ACCAGAGTGGCCGCTTGAGCCAGATGACTCAATCAGATGAAATGTGCCTGAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CCA 90 bp GTCCTGCAGGAACCTTTCAGACAGGCAGAACTAATAAGTGTGCCATCCCTACAAGGTAGAAGAACATCGTaGGATCCCCGAGAGGGTCAC +
Preference number: 4 (lower is better)
Translates to: VLQEPFRQAELISVPSLQGRRTS*DPREGH
Trigger: GTGACCCTCTCGGGGATCCCACGATGTTCTTCTACC...TTGTAGGGATGGCACACTTATTAGTTCTGCCTGTCTGAAAGGTTCCTGCAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CCA 90 bp GTCCTGCAGGAACCTTTCAGACAGGCAGAACTAATAAGTGTGCCATCCCTACAATGCATGGCTGCCTTCTaGAAGCCTGCCACAGCTAAC +
Preference number: 4 (lower is better)
Translates to: VLQEPFRQAELISVPSLQCMAAF*KPATAN
Trigger: GTTAGCTGTGGCAGGCTTCCAGAAGGCAGCCATGCA...TTGTAGGGATGGCACACTTATTAGTTCTGCCTGTCTGAAAGGTTCCTGCAGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CCA 90 bp GAGCTGTCTTCAGTGCAGTGTCCACACATCCCTCATAGAGCTGCCTCTGTGCAAATCCAGAGGTCTGAATaGGTTCCTCAGGATCCAAGT +
Preference number: 4 (lower is better)
Translates to: ELSSVQCPHIPHRAASVQIQRSE*VPQDPS
Trigger: ACTTGGATCCTGAGGAACCCATTCAGACCTCTGGAT...TTGCACAGAGGCAGCTCTATGAGGGATGTGTGGACACTGCACTGAAGACAGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414212.5
CDS-3UTR CCA 90 bp AGGTGTTGCGGTCTTTCCACTCCACTGGCACGTTACACTAACAGTGTTAATCTATCCCAAAGGCTCTGCTaGCGCATGCGCAGAGTGCTA +
Preference number: 4 (lower is better)
Translates to: RCCGLSTPLARYTNSVNLSQRLC*RMRRVL
Trigger: TAGCACTCTGCGCATGCGCCAGCAGAGCCTTTGGGA...TAGATTAACACTGTTAGTGTAACGTGCCAGTGGAGTGGAAAGACCGCAACACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CCA 90 bp CTGCCTCTGTGCAAGTATAAAGAAGTGGTAAGCCTCTGCCCCTCTCCATGCATTTGTGGCAACGCATGTTaGCAGTTTCCCTTCTCCACC +
Preference number: 4 (lower is better)
Translates to: LPLCKYKEVVSLCPSPCICGNAC*QFPFST
Trigger: GGTGGAGAAGGGAAACTGCCAACATGCGTTGCCACA...AATGCATGGAGAGGGGCAGAGGCTTACCACTTCTTTATACTTGCACAGAGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414212.5
CDS-3UTR CCA 90 bp CAACTCTCCAACTACTTGCTGTCCCGTACTGTCCGTTACTCGAGCATCCAAGTCTATCCCACTGGACTATaGCATAAGGGGCAGAAGCTG +
Preference number: 4 (lower is better)
Translates to: QLSNYLLSRTVRYSSIQVYPTGL*HKGQKL
Trigger: CAGCTTCTGCCCCTTATGCCATAGTCCAGTGGGATA...GACTTGGATGCTCGAGTAACGGACAGTACGGGACAGCAAGTAGTTGGAGAGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445063.5
CDS-3UTR TCA 90 bp GTCCTGCAGGAACCTTTCAGACAGGCAGAACTAATAAGTGTGCCATCCCTACAACACCACCGCATGCTATaGACCCTTGTTCCTTGTTCC +
Preference number: 4 (lower is better)
Translates to: VLQEPFRQAELISVPSLQHHRML*TLVPCS
Trigger: GGAACAAGGAACAAGGGTTCATAGCATGCGGTGGTG...TTGTAGGGATGGCACACTTATTAGTTCTGCCTGTCTGAAAGGTTCCTGCAGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR TCA 90 bp GTCCTGCAGGAACCTTTCAGACAGGCAGAACTAATAAGTGTGCCATCCCTACAAACGATTGCCATCCACTaGACCAACTATCACAGCCCC +
Preference number: 4 (lower is better)
Translates to: VLQEPFRQAELISVPSLQTIAIH*TNYHSP
Trigger: GGGGCTGTGATAGTTGGTTCAGTGGATGGCAATCGT...TTGTAGGGATGGCACACTTATTAGTTCTGCCTGTCTGAAAGGTTCCTGCAGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR GCA 90 bp GCCTCAGGCACATTTCATCTGATTGAGTCATCTGGCTCAAGCGGCCACTCTGGTATCTTCACCACCGCATaGTATGAACCCTTGTTCCTT +
Preference number: 4 (lower is better)
Translates to: ASGTFHLIESSGSSGHSGIFTTA*YEPLFL
Trigger: AAGGAACAAGGGTTCATAGCATGCGGTGGTGAAGAT...ACCAGAGTGGCCGCTTGAGCCAGATGACTCAATCAGATGAAATGTGCCTGAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR GCA 90 bp GCTTCCTGTGGCAACGCATGTTGGCAGTTTCCCTTCTCCACCTTCCATAAGGCTATCTTCACCACCGCATaGTATGAACCCTTGTTCCTT +
Preference number: 4 (lower is better)
Translates to: ASCGNACWQFPFSTFHKAIFTTA*YEPLFL
Trigger: AAGGAACAAGGGTTCATAGCATGCGGTGGTGAAGAT...AGCCTTATGGAAGGTGGAGAAGGGAAACTGCCAACATGCGTTGCCACAGGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414212.5
CDS-3UTR GCA 90 bp GCCTCAGGCACATTTCATCTGATTGAGTCATCTGGCTCAAGCGGCCACTCTGGTTGTATCTCTGAATGGTaGCAGATTCACGACCCACAA +
Preference number: 4 (lower is better)
Translates to: ASGTFHLIESSGSSGHSGCISEW*QIHDPQ
Trigger: TTGTGGGTCGTGAATCTGGCACCATTCAGAGATACA...ACCAGAGTGGCCGCTTGAGCCAGATGACTCAATCAGATGAAATGTGCCTGAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR GCA 90 bp CTGCCTCTGTGCAAGTATAAAGAAGTGGTAAGCCTCTGCCCCTCTCCATGCATTGAAGTGGTAAGCCTCTaGCCCTCTCCATGCATTATC +
Preference number: 4 (lower is better)
Translates to: LPLCKYKEVVSLCPSPCIEVVSL*PSPCII
Trigger: GATAATGCATGGAGAGGGGCAGAGGCTTACCACTTC...AATGCATGGAGAGGGGCAGAGGCTTACCACTTCTTTATACTTGCACAGAGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR GCA 90 bp GCCTCAGGCACATTTCATCTGATTGAGTCATCTGGCTCAAGCGGCCACTCTGGTCCATGGACTAAGAATTaGAGCTCTGACCAAACTGTC +
Preference number: 4 (lower is better)
Translates to: ASGTFHLIESSGSSGHSGPWTKN*SSDQTV
Trigger: GACAGTTTGGTCAGAGCTGCAATTCTTAGTCCATGG...ACCAGAGTGGCCGCTTGAGCCAGATGACTCAATCAGATGAAATGTGCCTGAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR GCA 90 bp TGCTGTCCCGTACTGTCCGTTACTCGAGCATCCAAGTCAAAGAAAGTCAGAACTCTCCACTGTCTTCAGTaGAGTGTCCACACATCCCTC +
Preference number: 4 (lower is better)
Translates to: CCPVLSVTRASKSKKVRTLHCLQ*SVHTSL
Trigger: GAGGGATGTGTGGACACTGCACTGAAGACAGTGGAG...AGTTCTGACTTTCTTTGACTTGGATGCTCGAGTAACGGACAGTACGGGACAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445063.5
CDS-3UTR CCA 90 bp AACAGCTTTGTTCCATTGGTTGAGATGTACGCAGGTATCTACTGCTGCCTTTGGGGTAGAAGAACATCGTaGGATCCCCGAGAGGGTCAC +
Preference number: 4 (lower is better)
Translates to: NSFVPLVEMYAGIYCCLWGRRTS*DPREGH
Trigger: GTGACCCTCTCGGGGATCCCACGATGTTCTTCTACC...CCAAAGGCAGCAGTAGATACCTGCGTACATCTCAACCAATGGAACAAAGCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414212.5
CDS-3UTR CCA 90 bp CAGTGCAGTGTCCACACATCCCTCATAGAGCTGCCTCTGTGCAAGTATAAAGAAAACACGCTGCCCATGTaGTTCCACTGGATGCCTACT +
Preference number: 4 (lower is better)
Translates to: QCSVHTSLIELPLCKYKENTLPM*FHWMPT
Trigger: AGTAGGCATCCAGTGGAACCACATGGGCAGCGTGTT...TTCTTTATACTTGCACAGAGGCAGCTCTATGAGGGATGTGTGGACACTGCACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR CCA 90 bp CTTTTGTCGATCAGCAAAGTAGTCTCCAATGGCATTGTTGGCTTGTTCCAGGAGTGCATGGCTGCCTTCTaGAAGCCTGCCACAGCTAAC +
Preference number: 4 (lower is better)
Translates to: LLSISKVVSNGIVGLFQECMAAF*KPATAN
Trigger: GTTAGCTGTGGCAGGCTTCCAGAAGGCAGCCATGCA...CTCCTGGAACAAGCCAACAATGCCATTGGAGACTACTTTGCTGATCGACAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445063.5
CDS-3UTR CCA 90 bp GCCTCAGGCACATTTCATCTGATTGAGTCATCTGGCTCAAGCGGCCACTCTGGTGAGGCTGCTATCACATaGGTTTTGGTCATTGCAACA +
Preference number: 4 (lower is better)
Translates to: ASGTFHLIESSGSSGHSGEAAIT*VLVIAT
Trigger: TGTTGCAATGACCAAAACCCATGTGATAGCAGCCTC...ACCAGAGTGGCCGCTTGAGCCAGATGACTCAATCAGATGAAATGTGCCTGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CCA 90 bp CTGTCTTCAGTGCAGTGTCCACACATCCCTCATAGAGCTGCCTCTGTGCAAGTAGACTGTATCTCTGAATaGTGCCAGATTCACGACCCA +
Preference number: 4 (lower is better)
Translates to: LSSVQCPHIPHRAASVQVDCISE*CQIHDP
Trigger: TGGGTCGTGAATCTGGCACCATTCAGAGATACAGTC...TACTTGCACAGAGGCAGCTCTATGAGGGATGTGTGGACACTGCACTGAAGACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR CCA 90 bp CTGCCTCTGTGCAAGTATAAAGAAGTGGTAAGCCTCTGCCCCTCTCCATGCATTCCAAAGTCGGGGGTGTaGATTGTCCTCTATGAACTG +
Preference number: 4 (lower is better)
Translates to: LPLCKYKEVVSLCPSPCIPKSGV*IVLYEL
Trigger: CAGTTCATAGAGGACAATCCACACCCCCGACTTTGG...AATGCATGGAGAGGGGCAGAGGCTTACCACTTCTTTATACTTGCACAGAGGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR CCA 90 bp TCCCAAAGGCTCTGCTGGCGCATGCGCAGAGTGCTAGCAGAGAGTAGATCTCCATTAACTTTTCCTCGCTaGGCATTCTTCATCTGTTCA +
Preference number: 4 (lower is better)
Translates to: SQRLCWRMRRVLAESRSPLTFPR*AFFICS
Trigger: TGAACAGATGAAGAATGCCCAGCGAGGAAAAGTTAA...TGGAGATCTACTCTCTGCTAGCACTCTGCGCATGCGCCAGCAGAGCCTTTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414212.5
CDS-3UTR CCA 90 bp TTGATACTCAGTGATTGGGCTTCCTGTGGCAACGCATGTTGGCAGTTTCCCTTCTATCCCACTGGACTATaGCATAAGGGGCAGAAGCTG +
Preference number: 4 (lower is better)
Translates to: LILSDWASCGNACWQFPFYPTGL*HKGQKL
Trigger: CAGCTTCTGCCCCTTATGCCATAGTCCAGTGGGATA...GAAGGGAAACTGCCAACATGCGTTGCCACAGGAAGCCCAATCACTGAGTATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR TCA 90 bp AGGTGTTGCGGTCTTTCCACTCCACTGGCACGTTACACTAACAGTGTTAATCTACACCACCGCATGCTATaGACCCTTGTTCCTTGTTCC +
Preference number: 4 (lower is better)
Translates to: RCCGLSTPLARYTNSVNLHHRML*TLVPCS
Trigger: GGAACAAGGAACAAGGGTTCATAGCATGCGGTGGTG...TAGATTAACACTGTTAGTGTAACGTGCCAGTGGAGTGGAAAGACCGCAACACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR TCA 90 bp AGGTGTTGCGGTCTTTCCACTCCACTGGCACGTTACACTAACAGTGTTAATCTAACGATTGCCATCCACTaGACCAACTATCACAGCCCC +
Preference number: 4 (lower is better)
Translates to: RCCGLSTPLARYTNSVNLTIAIH*TNYHSP
Trigger: GGGGCTGTGATAGTTGGTTCAGTGGATGGCAATCGT...TAGATTAACACTGTTAGTGTAACGTGCCAGTGGAGTGGAAAGACCGCAACACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR TCA 90 bp CTGTCTTCAGTGCAGTGTCCACACATCCCTCATAGAGCTGCCTCTGTGCAAGTATATAGATCCAGTTTCTaGAGAGCTGCTTCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: LSSVQCPHIPHRAASVQVYRSSF*RAASAS
Trigger: ACTGGCTGAAGCAGCTCTTCAGAAACTGGATCTATA...TACTTGCACAGAGGCAGCTCTATGAGGGATGTGTGGACACTGCACTGAAGACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR GCA 90 bp GTGGCCTCTGAACTTTTTCCTTTAACTTTTCCTCGCTGGGCATTCTTCATCTGTCCACAGCTAACACGCTaGCCATGTGGTTCCACTGGA +
Preference number: 4 (lower is better)
Translates to: VASELFPLTFPRWAFFICPQLTR*PCGSTG
Trigger: TCCAGTGGAACCACATGGGCAGCGTGTTAGCTGTGG...ACAGATGAAGAATGCCCAGCGAGGAAAAGTTAAAGGAAAAAGTTCAGAGGCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR GCA 90 bp CAACTCTCCAACTACTTGCTGTCCCGTACTGTCCGTTACTCGAGCATCCAAGTCTGCTTCTTTCGAGGCTaGTATCACATGGGTTTTGGT +
Preference number: 4 (lower is better)
Translates to: QLSNYLLSRTVRYSSIQVCFFRG*YHMGFG
Trigger: ACCAAAACCCATGTGATAGCAGCCTCGAAAGAAGCA...GACTTGGATGCTCGAGTAACGGACAGTACGGGACAGCAAGTAGTTGGAGAGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445063.5
CDS-3UTR GCA 90 bp CTGTCTTCAGTGCAGTGTCCACACATCCCTCATAGAGCTGCCTCTGTGCAAGTACAGGAGACTGTCATCTaGATCACCAGATCCAGTTTT +
Preference number: 4 (lower is better)
Translates to: LSSVQCPHIPHRAASVQVQETVI*ITRSSF
Trigger: AAAACTGGATCTGGTGATGCAGATGACAGTCTCCTG...TACTTGCACAGAGGCAGCTCTATGAGGGATGTGTGGACACTGCACTGAAGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR GCA 90 bp TGCTGTCCCGTACTGTCCGTTACTCGAGCATCCAAGTCAAAGAAAGTCAGAACTGAAGTGGTAAGCCTCTaGCCCTCTCCATGCATTATC +
Preference number: 4 (lower is better)
Translates to: CCPVLSVTRASKSKKVRTEVVSL*PSPCII
Trigger: GATAATGCATGGAGAGGGGCAGAGGCTTACCACTTC...AGTTCTGACTTTCTTTGACTTGGATGCTCGAGTAACGGACAGTACGGGACAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445063.5
CDS-3UTR GCA 90 bp GTCCACACATCCCTCATAGAGCTGCCTCTGTGCAAGTATAAAGAAGTGGTAAGCAAGAGCTGTCTTCAGTaGAGTGTCCACACATCCCTC +
Preference number: 4 (lower is better)
Translates to: VHTSLIELPLCKYKEVVSKSCLQ*SVHTSL
Trigger: GAGGGATGTGTGGACACTGCACTGAAGACAGCTCTT...GCTTACCACTTCTTTATACTTGCACAGAGGCAGCTCTATGAGGGATGTGTGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414212.5
CDS-3UTR CCA 90 bp GTCCTGCAGGAACCTTTCAGACAGGCAGAACTAATAAGTGTGCCATCCCTACAACCCATGTGGTTCCACTaGATGCCTACTACGTACATG +
Preference number: 4 (lower is better)
Translates to: VLQEPFRQAELISVPSLQPMWFH*MPTTYM
Trigger: CATGTACGTAGTAGGCATCCAGTGGAACCACATGGG...TTGTAGGGATGGCACACTTATTAGTTCTGCCTGTCTGAAAGGTTCCTGCAGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CCA 90 bp GCAGAAGCTGTAGTGGCTTATTTCCTGAGCAAGGACACCGTGTTTGCATACACTCCCATGTGGTTCCACTaGATGCCTACTACGTACATG +
Preference number: 4 (lower is better)
Translates to: AEAVVAYFLSKDTVFAYTPMWFH*MPTTYM
Trigger: CATGTACGTAGTAGGCATCCAGTGGAACCACATGGG...AGTGTATGCAAACACGGTGTCCTTGCTCAGGAAATAAGCCACTACAGCTTCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR CCA 90 bp AGCCTCTGCCCCTCTCCATGCATTATCTGTGAAACGATCTGTTGTAGACAGAACCCCATGTGGTTCCACTaGATGCCTACTACGTACATG +
Preference number: 4 (lower is better)
Translates to: SLCPSPCIICETICCRQNPMWFH*MPTTYM
Trigger: CATGTACGTAGTAGGCATCCAGTGGAACCACATGGG...GTTCTGTCTACAACAGATCGTTTCACAGATAATGCATGGAGAGGGGCAGAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR CCA 90 bp TATAAAGAAGTGGTAAGCCTCTGCCCCTCTCCATGCATTATCTGTGAAACGATCTGCATGGCTGCCTTCTaGAAGCCTGCCACAGCTAAC +
Preference number: 4 (lower is better)
Translates to: YKEVVSLCPSPCIICETICMAAF*KPATAN
Trigger: GTTAGCTGTGGCAGGCTTCCAGAAGGCAGCCATGCA...GATCGTTTCACAGATAATGCATGGAGAGGGGCAGAGGCTTACCACTTCTTTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR CCA 90 bp GCCTCAGGCACATTTCATCTGATTGAGTCATCTGGCTCAAGCGGCCACTCTGGTCTGGACGATCAGGTCTaGTATATGCATAAACTACAG +
Preference number: 4 (lower is better)
Translates to: ASGTFHLIESSGSSGHSGLDDQV*YMHKLQ
Trigger: CTGTAGTTTATGCATATACCAGACCTGATCGTCCAG...ACCAGAGTGGCCGCTTGAGCCAGATGACTCAATCAGATGAAATGTGCCTGAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CCA 90 bp TTGATACTCAGTGATTGGGCTTCCTGTGGCAACGCATGTTGGCAGTTTCCCTTCGACTGTATCTCTGAATaGTGCCAGATTCACGACCCA +
Preference number: 4 (lower is better)
Translates to: LILSDWASCGNACWQFPFDCISE*CQIHDP
Trigger: TGGGTCGTGAATCTGGCACCATTCAGAGATACAGTC...GAAGGGAAACTGCCAACATGCGTTGCCACAGGAAGCCCAATCACTGAGTATCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR CCA 90 bp TTGAACAAGTCCCAAAGGCTCTGCTGGCGCATGCGCAGAGTGCTAGCAGAGAGTAATCAGGATTATCTTTaGCCCACTTCATATCCCAGA +
Preference number: 4 (lower is better)
Translates to: LNKSQRLCWRMRRVLAESNQDYL*PTSYPR
Trigger: TCTGGGATATGAAGTGGGCCAAAGATAATCCTGATT...ACTCTCTGCTAGCACTCTGCGCATGCGCCAGCAGAGCCTTTGGGACTTGTTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414212.5
CDS-3UTR CCA 90 bp CCACTGGACTATGGCATAAGGGGCAGAAGCTGTAGTGGCTTATTTCCTGAGCAAATCCAGAGGTCTGAATaGGTTCCTCAGGATCCAAGT +
Preference number: 4 (lower is better)
Translates to: PLDYGIRGRSCSGLFPEQIQRSE*VPQDPS
Trigger: ACTTGGATCCTGAGGAACCCATTCAGACCTCTGGAT...TTGCTCAGGAAATAAGCCACTACAGCTTCTGCCCCTTATGCCATAGTCCAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR CCA 90 bp GTCCTGCAGGAACCTTTCAGACAGGCAGAACTAATAAGTGTGCCATCCCTACAACCAAAGTCGGGGGTGTaGATTGTCCTCTATGAACTG +
Preference number: 4 (lower is better)
Translates to: VLQEPFRQAELISVPSLQPKSGV*IVLYEL
Trigger: CAGTTCATAGAGGACAATCCACACCCCCGACTTTGG...TTGTAGGGATGGCACACTTATTAGTTCTGCCTGTCTGAAAGGTTCCTGCAGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CCA 90 bp GCCTCAGGCACATTTCATCTGATTGAGTCATCTGGCTCAAGCGGCCACTCTGGTCAAAGTAGTCTCCAATaGCATTGTTGGCTTGTTCCA +
Preference number: 4 (lower is better)
Translates to: ASGTFHLIESSGSSGHSGQSSLQ*HCWLVP
Trigger: TGGAACAAGCCAACAATGCCATTGGAGACTACTTTG...ACCAGAGTGGCCGCTTGAGCCAGATGACTCAATCAGATGAAATGTGCCTGAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CCA 90 bp AGGTGTTGCGGTCTTTCCACTCCACTGGCACGTTACACTAACAGTGTTAATCTATGTGGCAACGCATGTTaGCAGTTTCCCTTCTCCACC +
Preference number: 4 (lower is better)
Translates to: RCCGLSTPLARYTNSVNLCGNAC*QFPFST
Trigger: GGTGGAGAAGGGAAACTGCCAACATGCGTTGCCACA...TAGATTAACACTGTTAGTGTAACGTGCCAGTGGAGTGGAAAGACCGCAACACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CCA 90 bp GTCCTGCAGGAACCTTTCAGACAGGCAGAACTAATAAGTGTGCCATCCCTACAATATCCCACTGGACTATaGCATAAGGGGCAGAAGCTG +
Preference number: 4 (lower is better)
Translates to: VLQEPFRQAELISVPSLQYPTGL*HKGQKL
Trigger: CAGCTTCTGCCCCTTATGCCATAGTCCAGTGGGATA...TTGTAGGGATGGCACACTTATTAGTTCTGCCTGTCTGAAAGGTTCCTGCAGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
3UTR CAA 72 bp ACCTGCCGAAGTAGCCAACAACTTCAGCCTGTTTCATaGACTCACTCAGTAGTTTGCCCAAGCGCTTCACAA +
Preference number: 4 (lower is better)
Translates to: TCRSSQQLQPVS*THSVVCPSASQ
Trigger: TTGTGAAGCGCTTGGGCAAACTACTGAGTGAGTCAATGAAACAGGCTGAAGTTGTTGGCTACTTCGGCAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445063.5
3UTR CAA 72 bp TCGATCAGCAAAGTAGTCTCCAATGGCATTGTTGGCTaGTTCCAGGAGACTGTCATCTGCATCACCAGATCC +
Preference number: 4 (lower is better)
Translates to: SISKVVSNGIVG*FQETVICITRS
Trigger: GGATCTGGTGATGCAGATGACAGTCTCCTGGAACAAGCCAACAATGCCATTGGAGACTACTTTGCTGATCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445063.5
CDS-3UTR TCA 90 bp TATAAAGAAGTGGTAAGCCTCTGCCCCTCTCCATGCATTATCTGTGAAACGATCCACCACCGCATGCTATaGACCCTTGTTCCTTGTTCC +
Preference number: 4 (lower is better)
Translates to: YKEVVSLCPSPCIICETIHHRML*TLVPCS
Trigger: GGAACAAGGAACAAGGGTTCATAGCATGCGGTGGTG...GATCGTTTCACAGATAATGCATGGAGAGGGGCAGAGGCTTACCACTTCTTTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414212.5
CDS-3UTR TCA 90 bp TGCAGTGTCCACACATCCCTCATAGAGCTGCCTCTGTGCAAGTATAAAGAAGTGGGTAGACTGTATCTCTaGATGGTGCCAGATTCACGA +
Preference number: 4 (lower is better)
Translates to: CSVHTSLIELPLCKYKEVGRLYL*MVPDSR
Trigger: TCGTGAATCTGGCACCATTCAGAGATACAGTCTACC...CACTTCTTTATACTTGCACAGAGGCAGCTCTATGAGGGATGTGTGGACACTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR TCA 90 bp AGCCTCTGCCCCTCTCCATGCATTATCTGTGAAACGATCTGTTGTAGACAGAACATATATCCAGAGGTCTaGATGGGTTCCTCAGGATCC +
Preference number: 4 (lower is better)
Translates to: SLCPSPCIICETICCRQNIYPEV*MGSSGS
Trigger: GGATCCTGAGGAACCCATTCAGACCTCTGGATATAT...GTTCTGTCTACAACAGATCGTTTCACAGATAATGCATGGAGAGGGGCAGAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR TCA 90 bp GCCTCAGGCACATTTCATCTGATTGAGTCATCTGGCTCAAGCGGCCACTCTGGTGTACATAGAGCTTCTTaGCACGTAAAGGTTTACTTC +
Preference number: 4 (lower is better)
Translates to: ASGTFHLIESSGSSGHSGVHRAS*HVKVYF
Trigger: GAAGTAAACCTTTACGTGTCAAGAAGCTCTATGTAC...ACCAGAGTGGCCGCTTGAGCCAGATGACTCAATCAGATGAAATGTGCCTGAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR TCA 90 bp GCCTCAGGCACATTTCATCTGATTGAGTCATCTGGCTCAAGCGGCCACTCTGGTCCATCGCCTCACTTCTaGAAATACAATAAAGAAGAC +
Preference number: 4 (lower is better)
Translates to: ASGTFHLIESSGSSGHSGPSPHF*KYNKED
Trigger: GTCTTCTTTATTGTATTTTCAGAAGTGAGGCGATGG...ACCAGAGTGGCCGCTTGAGCCAGATGACTCAATCAGATGAAATGTGCCTGAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR TCA 90 bp GTCCTGCAGGAACCTTTCAGACAGGCAGAACTAATAAGTGTGCCATCCCTACAAAAGTGTACTTGCCCCTaGCACCCTTCTATAGAGCAA +
Preference number: 4 (lower is better)
Translates to: VLQEPFRQAELISVPSLQKCTCP*HPSIEQ
Trigger: TTGCTCTATAGAAGGGTGTCAGGGGCAAGTACACTT...TTGTAGGGATGGCACACTTATTAGTTCTGCCTGTCTGAAAGGTTCCTGCAGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR GCA 90 bp GTCCTGCAGGAACCTTTCAGACAGGCAGAACTAATAAGTGTGCCATCCCTACAACCACGTAGCCTTCTGTaGCATGGTACCAATGAATTC +
Preference number: 4 (lower is better)
Translates to: VLQEPFRQAELISVPSLQPRSLL*HGTNEF
Trigger: GAATTCATTGGTACCATGGCACAGAAGGCTACGTGG...TTGTAGGGATGGCACACTTATTAGTTCTGCCTGTCTGAAAGGTTCCTGCAGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR GCA 90 bp CTGTGCAAGTATAAAGAAGTGGTAAGCCTCTGCCCCTCTCCATGCATTATCTGTTGTGGTTCCACTGGATaGCTACTACGTACATGCCAG +
Preference number: 4 (lower is better)
Translates to: LCKYKEVVSLCPSPCIICCGSTG*LLRTCQ
Trigger: CTGGCATGTACGTAGTAGGCATCCAGTGGAACCACA...ACAGATAATGCATGGAGAGGGGCAGAGGCTTACCACTTCTTTATACTTGCACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR GCA 90 bp GTCATCTGCATCACCAGATCCAGTTTTCAGGAGCTGGAGTACTCTAAACCAATCTGTGGTTCCACTGGATaGCTACTACGTACATGCCAG +
Preference number: 4 (lower is better)
Translates to: VICITRSSFQELEYSKPICGSTG*LLRTCQ
Trigger: CTGGCATGTACGTAGTAGGCATCCAGTGGAACCACA...GATTGGTTTAGAGTACTCCAGCTCCTGAAAACTGGATCTGGTGATGCAGATGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445063.5
CDS-3UTR GCA 90 bp TATTTCCTGAGCAAGGACACCGTGTTTGCATACACTGCACATCCAGAATTGATACCACAGCTAACACGCTaGCCATGTGGTTCCACTGGA +
Preference number: 4 (lower is better)
Translates to: YFLSKDTVFAYTAHPELIPQLTR*PCGSTG
Trigger: TCCAGTGGAACCACATGGGCAGCGTGTTAGCTGTGG...TATCAATTCTGGATGTGCAGTGTATGCAAACACGGTGTCCTTGCTCAGGAAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR GCA 90 bp GCAGAAGCTGTAGTGGCTTATTTCCTGAGCAAGGACACCGTGTTTGCATACACTTTCACATCTTTGTCCTaGATGGCTGCCTTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: AEAVVAYFLSKDTVFAYTFTSLS*MAAFWK
Trigger: CTTCCAGAAGGCAGCCATGCAGGACAAAGATGTGAA...AGTGTATGCAAACACGGTGTCCTTGCTCAGGAAATAAGCCACTACAGCTTCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR GCA 90 bp AGGCCAATAGCAAGATCCCTTCTGTCCATCTCGAGATACGTTCTTTCAGCCTCTTTCACATCTTTGTCCTaGATGGCTGCCTTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: RPIARSLLSISRYVLSASFTSLS*MAAFWK
Trigger: CTTCCAGAAGGCAGCCATGCAGGACAAAGATGTGAA...AGAGGCTGAAAGAACGTATCTCGAGATGGACAGAAGGGATCTTGCTATTGGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445063.5
CDS-3UTR GCA 90 bp GTAAGCCTCTGCCCCTCTCCATGCATTATCTGTGAAACGATCTGTTGTAGACAGTGCTGTGAGCTTCTTTaGCACACGATATTGCCAGGT +
Preference number: 4 (lower is better)
Translates to: VSLCPSPCIICETICCRQCCELL*HTILPG
Trigger: ACCTGGCAATATCGTGTGGCAAAGAAGCTCACAGCA...CTGTCTACAACAGATCGTTTCACAGATAATGCATGGAGAGGGGCAGAGGCTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR GCA 90 bp GTCCTGCAGGAACCTTTCAGACAGGCAGAACTAATAAGTGTGCCATCCCTACAAAACTCTCCAACTACTTaGTGTCCCGTACTGTCCGTT +
Preference number: 4 (lower is better)
Translates to: VLQEPFRQAELISVPSLQNSPTT*CPVLSV
Trigger: AACGGACAGTACGGGACAGCAAGTAGTTGGAGAGTT...TTGTAGGGATGGCACACTTATTAGTTCTGCCTGTCTGAAAGGTTCCTGCAGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR GCA 90 bp TGCAGTGTCCACACATCCCTCATAGAGCTGCCTCTGTGCAAGTATAAAGAAGTGAACTCTCCAACTACTTaGTGTCCCGTACTGTCCGTT +
Preference number: 4 (lower is better)
Translates to: CSVHTSLIELPLCKYKEVNSPTT*CPVLSV
Trigger: AACGGACAGTACGGGACAGCAAGTAGTTGGAGAGTT...CACTTCTTTATACTTGCACAGAGGCAGCTCTATGAGGGATGTGTGGACACTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR GCA 90 bp TACACTGCACATCCAGAATTGATACTCAGTGATTGGGCTTCCTGTGGCAACGCAAACCTTCTCAATCAGTaGTCGGCTATCTCGCAGAGA +
Preference number: 4 (lower is better)
Translates to: YTAHPELILSDWASCGNANLLNQ*SAISQR
Trigger: TCTCTGCGAGATAGCCGAGCACTGATTGAGAAGGTT...TGCGTTGCCACAGGAAGCCCAATCACTGAGTATCAATTCTGGATGTGCAGTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR GCA 90 bp GCAGAAGCTGTAGTGGCTTATTTCCTGAGCAAGGACACCGTGTTTGCATACACTCAGCGCACAAATGCTTaGTCTGCAGTGTATAGATCC +
Preference number: 4 (lower is better)
Translates to: AEAVVAYFLSKDTVFAYTQRTNA*SAVYRS
Trigger: GGATCTATACACTGCAGAGCAAGCATTTGTGCGCTG...AGTGTATGCAAACACGGTGTCCTTGCTCAGGAAATAAGCCACTACAGCTTCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR GCA 90 bp TTGATACTCAGTGATTGGGCTTCCTGTGGCAACGCATGTTGGCAGTTTCCCTTCTGCCTTGGTAATCTTTaGAGCGCACAAATGCTTGCT +
Preference number: 4 (lower is better)
Translates to: LILSDWASCGNACWQFPFCLGNL*SAQMLA
Trigger: AGCAAGCATTTGTGCGCTGCAAAGATTACCAAGGCA...GAAGGGAAACTGCCAACATGCGTTGCCACAGGAAGCCCAATCACTGAGTATCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR GCA 90 bp GTCCACACATCCCTCATAGAGCTGCCTCTGTGCAAGTATAAAGAAGTGGTAAGCCAGCCTCTTCAAACCTaGCGAAGTAGCCAACAACTT +
Preference number: 4 (lower is better)
Translates to: VHTSLIELPLCKYKEVVSQPLQT*RSSQQL
Trigger: AAGTTGTTGGCTACTTCGGCAGGTTTGAAGAGGCTG...GCTTACCACTTCTTTATACTTGCACAGAGGCAGCTCTATGAGGGATGTGTGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR GCA 90 bp GTCCTGCAGGAACCTTTCAGACAGGCAGAACTAATAAGTGTGCCATCCCTACAACTCTGCCCCTCTCCATaGATTATCTGTGAAACGATC +
Preference number: 4 (lower is better)
Translates to: VLQEPFRQAELISVPSLQLCPSP*IICETI
Trigger: GATCGTTTCACAGATAATGCATGGAGAGGGGCAGAG...TTGTAGGGATGGCACACTTATTAGTTCTGCCTGTCTGAAAGGTTCCTGCAGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CCA 90 bp GCCTCAGGCACATTTCATCTGATTGAGTCATCTGGCTCAAGCGGCCACTCTGGTGACAACACAATATTCTaGACGATCAGGTCTGGTATA +
Preference number: 4 (lower is better)
Translates to: ASGTFHLIESSGSSGHSGDNTIF*TIRSGI
Trigger: TATACCAGACCTGATCGTCCAGAATATTGTGTTGTC...ACCAGAGTGGCCGCTTGAGCCAGATGACTCAATCAGATGAAATGTGCCTGAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CCA 90 bp GCCTCAGGCACATTTCATCTGATTGAGTCATCTGGCTCAAGCGGCCACTCTGGTAGTTATGGCACAAATTaGATCCCTTGTGCCTTGAAT +
Preference number: 4 (lower is better)
Translates to: ASGTFHLIESSGSSGHSGSYGTN*IPCALN
Trigger: ATTCAAGGCACAAGGGATCCAATTTGTGCCATAACT...ACCAGAGTGGCCGCTTGAGCCAGATGACTCAATCAGATGAAATGTGCCTGAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CCA 90 bp GCTTCCTGTGGCAACGCATGTTGGCAGTTTCCCTTCTCCACCTTCCATAAGGCTTATCTGATGCAGTTATaGCACAAATTGGATCCCTTG +
Preference number: 4 (lower is better)
Translates to: ASCGNACWQFPFSTFHKAYLMQL*HKLDPL
Trigger: CAAGGGATCCAATTTGTGCCATAACTGCATCAGATA...AGCCTTATGGAAGGTGGAGAAGGGAAACTGCCAACATGCGTTGCCACAGGAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414212.5
CDS-3UTR CCA 90 bp GTCCTGCAGGAACCTTTCAGACAGGCAGAACTAATAAGTGTGCCATCCCTACAAGACTGTATCTCTGAATaGTGCCAGATTCACGACCCA +
Preference number: 4 (lower is better)
Translates to: VLQEPFRQAELISVPSLQDCISE*CQIHDP
Trigger: TGGGTCGTGAATCTGGCACCATTCAGAGATACAGTC...TTGTAGGGATGGCACACTTATTAGTTCTGCCTGTCTGAAAGGTTCCTGCAGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CCA 90 bp GCCTCAGGCACATTTCATCTGATTGAGTCATCTGGCTCAAGCGGCCACTCTGGTAATCAGGATTATCTTTaGCCCACTTCATATCCCAGA +
Preference number: 4 (lower is better)
Translates to: ASGTFHLIESSGSSGHSGNQDYL*PTSYPR
Trigger: TCTGGGATATGAAGTGGGCCAAAGATAATCCTGATT...ACCAGAGTGGCCGCTTGAGCCAGATGACTCAATCAGATGAAATGTGCCTGAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CCA 90 bp GTCCTGCAGGAACCTTTCAGACAGGCAGAACTAATAAGTGTGCCATCCCTACAAATCCAGAGGTCTGAATaGGTTCCTCAGGATCCAAGT +
Preference number: 4 (lower is better)
Translates to: VLQEPFRQAELISVPSLQIQRSE*VPQDPS
Trigger: ACTTGGATCCTGAGGAACCCATTCAGACCTCTGGAT...TTGTAGGGATGGCACACTTATTAGTTCTGCCTGTCTGAAAGGTTCCTGCAGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CCA 90 bp GCCTCAGGCACATTTCATCTGATTGAGTCATCTGGCTCAAGCGGCCACTCTGGTTTAACTTTTCCTCGCTaGGCATTCTTCATCTGTTCA +
Preference number: 4 (lower is better)
Translates to: ASGTFHLIESSGSSGHSGLTFPR*AFFICS
Trigger: TGAACAGATGAAGAATGCCCAGCGAGGAAAAGTTAA...ACCAGAGTGGCCGCTTGAGCCAGATGACTCAATCAGATGAAATGTGCCTGAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CCA 90 bp GCATACACTGCACATCCAGAATTGATACTCAGTGATTGGGCTTCCTGTGGCAACCAGCCAAGGCAGAAGTaGCCTCTGAACTTTTTCCTT +
Preference number: 4 (lower is better)
Translates to: AYTAHPELILSDWASCGNQPRQK*PLNFFL
Trigger: AAGGAAAAAGTTCAGAGGCCACTTCTGCCTTGGCTG...GTTGCCACAGGAAGCCCAATCACTGAGTATCAATTCTGGATGTGCAGTGTATGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR CCA 90 bp TACACTGCACATCCAGAATTGATACTCAGTGATTGGGCTTCCTGTGGCAACGCATTGATACTCAGTGATTaGGCTTCCTGTGGCAACGCA +
Preference number: 4 (lower is better)
Translates to: YTAHPELILSDWASCGNALILSD*ASCGNA
Trigger: TGCGTTGCCACAGGAAGCCCAATCACTGAGTATCAA...TGCGTTGCCACAGGAAGCCCAATCACTGAGTATCAATTCTGGATGTGCAGTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR CCA 90 bp CTGTGCAAGTATAAAGAAGTGGTAAGCCTCTGCCCCTCTCCATGCATTATCTGTTGTGGCAACGCATGTTaGCAGTTTCCCTTCTCCACT +
Preference number: 4 (lower is better)
Translates to: LCKYKEVVSLCPSPCIICCGNAC*QFPFST
Trigger: AGTGGAGAAGGGAAACTGCCAACATGCGTTGCCACA...ACAGATAATGCATGGAGAGGGGCAGAGGCTTACCACTTCTTTATACTTGCACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445063.5
CDS-3UTR TCA 90 bp GTAAGCCTCTGCCCCTCTCCATGCATTATCTGTGAAACGATCTGTTGTAGACAGGTGCCATGGTACCAATaGATTCCAGCAATGCTGATA +
Preference number: 4 (lower is better)
Translates to: VSLCPSPCIICETICCRQVPWYQ*IPAMLI
Trigger: TATCAGCATTGCTGGAATTCATTGGTACCATGGCAC...CTGTCTACAACAGATCGTTTCACAGATAATGCATGGAGAGGGGCAGAGGCTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR TCA 90 bp TGCAGTGTCCACACATCCCTCATAGAGCTGCCTCTGTGCAAGTATAAAGAAGTGCGAGACCGTGTGATCTaGTTAATTTCCAATGCTGTG +
Preference number: 4 (lower is better)
Translates to: CSVHTSLIELPLCKYKEVRDRVI*LISNAV
Trigger: CACAGCATTGGAAATTAATCAGATCACACGGTCTCG...CACTTCTTTATACTTGCACAGAGGCAGCTCTATGAGGGATGTGTGGACACTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR TCA 90 bp TTCCTGAGCAAGGACACCGTGTTTGCATACACTGCACATCCAGAATTGATACTCAAGCACACCATCCATTaGTCCAGAAGGGGTATCATC +
Preference number: 4 (lower is better)
Translates to: FLSKDTVFAYTAHPELILKHTIH*SRRGII
Trigger: GATGATACCCCTTCTGGATCAATGGATGGTGTGCTT...GAGTATCAATTCTGGATGTGCAGTGTATGCAAACACGGTGTCCTTGCTCAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR TCA 90 bp AGGTGTTGCGGTCTTTCCACTCCACTGGCACGTTACACTAACAGTGTTAATCTAGGTAGACTGTATCTCTaGATGGTGCCAGATTCACGA +
Preference number: 4 (lower is better)
Translates to: RCCGLSTPLARYTNSVNLGRLYL*MVPDSR
Trigger: TCGTGAATCTGGCACCATTCAGAGATACAGTCTACC...TAGATTAACACTGTTAGTGTAACGTGCCAGTGGAGTGGAAAGACCGCAACACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR TCA 90 bp GCCTCAGGCACATTTCATCTGATTGAGTCATCTGGCTCAAGCGGCCACTCTGGTCAGGATCCAAGTTTCTaGAAACATACATTCTTGTCT +
Preference number: 4 (lower is better)
Translates to: ASGTFHLIESSGSSGHSGQDPSF*KHTFLS
Trigger: AGACAAGAATGTATGTTTTCAGAAACTTGGATCCTG...ACCAGAGTGGCCGCTTGAGCCAGATGACTCAATCAGATGAAATGTGCCTGAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR TCA 90 bp GTCCACACATCCCTCATAGAGCTGCCTCTGTGCAAGTATAAAGAAGTGGTAAGCTATAGATCCAGTTTCTaGAGAGCTGCTTCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: VHTSLIELPLCKYKEVVSYRSSF*RAASAS
Trigger: ACTGGCTGAAGCAGCTCTTCAGAAACTGGATCTATA...GCTTACCACTTCTTTATACTTGCACAGAGGCAGCTCTATGAGGGATGTGTGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR TCA 90 bp GTCCACACATCCCTCATAGAGCTGCCTCTGTGCAAGTATAAAGAAGTGGTAAGCTCTCCACAGGAGGGATaGTGTCTTCATAGTCTTTCA +
Preference number: 4 (lower is better)
Translates to: VHTSLIELPLCKYKEVVSSPQEG*CLHSLS
Trigger: TGAAAGACTATGAAGACATCATCCCTCCTGTGGAGA...GCTTACCACTTCTTTATACTTGCACAGAGGCAGCTCTATGAGGGATGTGTGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414212.5
CDS-3UTR TCA 90 bp GCCTCAGGCACATTTCATCTGATTGAGTCATCTGGCTCAAGCGGCCACTCTGGTTTTAATGAAAGCTTTTaGACAAGTCCCAAAGGCTCT +
Preference number: 4 (lower is better)
Translates to: ASGTFHLIESSGSSGHSGFNESF*TSPKGS
Trigger: AGAGCCTTTGGGACTTGTTCAAAAGCTTTCATTAAA...ACCAGAGTGGCCGCTTGAGCCAGATGACTCAATCAGATGAAATGTGCCTGAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR TCA 90 bp AAGAGCTGTCTTCAGTGCAGTGTCCACACATCCCTCATAGAGCTGCCTCTGTGCTTTAATGAAAGCTTTTaGACAAGTCCCAAAGGCTCT +
Preference number: 4 (lower is better)
Translates to: KSCLQCSVHTSLIELPLCFNESF*TSPKGS
Trigger: AGAGCCTTTGGGACTTGTTCAAAAGCTTTCATTAAA...GCACAGAGGCAGCTCTATGAGGGATGTGTGGACACTGCACTGAAGACAGCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414212.5
CDS-3UTR TCA 90 bp CCTGAGCAAGGACACCGTGTTTGCATACACTGCACATCCAGAATTGATACTCAGCTGCACATCCAGAATTaGTACTCAGTGATTGGGCTT +
Preference number: 4 (lower is better)
Translates to: PEQGHRVCIHCTSRIDTQLHIQN*YSVIGL
Trigger: AAGCCCAATCACTGAGTATCAATTCTGGATGTGCAG...CTGAGTATCAATTCTGGATGTGCAGTGTATGCAAACACGGTGTCCTTGCTCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR TCA 90 bp GTCCTGCAGGAACCTTTCAGACAGGCAGAACTAATAAGTGTGCCATCCCTACAACAATCTGCAACATGCTaGACTTGTCTCTGTCTCTAC +
Preference number: 4 (lower is better)
Translates to: VLQEPFRQAELISVPSLQQSATC*TCLCLY
Trigger: GTAGAGACAGAGACAAGTTCAGCATGTTGCAGATTG...TTGTAGGGATGGCACACTTATTAGTTCTGCCTGTCTGAAAGGTTCCTGCAGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR GCA 90 bp AACAGCTTTGTTCCATTGGTTGAGATGTACGCAGGTATCTACTGCTGCCTTTGGCCACGTAGCCTTCTGTaGCATGGTACCAATGAATTC +
Preference number: 4 (lower is better)
Translates to: NSFVPLVEMYAGIYCCLWPRSLL*HGTNEF
Trigger: GAATTCATTGGTACCATGGCACAGAAGGCTACGTGG...CCAAAGGCAGCAGTAGATACCTGCGTACATCTCAACCAATGGAACAAAGCTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414212.5
CDS-3UTR GCA 90 bp AGCCTCTGCCCCTCTCCATGCATTATCTGTGAAACGATCTGTTGTAGACAGAACTGCCTACTACGTACATaGCAGTGTCAATCAAAACGG +
Preference number: 4 (lower is better)
Translates to: SLCPSPCIICETICCRQNCLLRT*QCQSKR
Trigger: CCGTTTTGATTGACACTGGCATGTACGTAGTAGGCA...GTTCTGTCTACAACAGATCGTTTCACAGATAATGCATGGAGAGGGGCAGAGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR GCA 90 bp GTCCTGCAGGAACCTTTCAGACAGGCAGAACTAATAAGTGTGCCATCCCTACAATGCTTCTTTCGAGGCTaGTATCACATGGGTTTTGGT +
Preference number: 4 (lower is better)
Translates to: VLQEPFRQAELISVPSLQCFFRG*YHMGFG
Trigger: ACCAAAACCCATGTGATAGCAGCCTCGAAAGAAGCA...TTGTAGGGATGGCACACTTATTAGTTCTGCCTGTCTGAAAGGTTCCTGCAGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR GCA 90 bp GTAAGCCTCTGCCCCTCTCCATGCATTATCTGTGAAACGATCTGTTGTAGACAGTGCTTCTTTCGAGGCTaGTATCACATGGGTTTTGGT +
Preference number: 4 (lower is better)
Translates to: VSLCPSPCIICETICCRQCFFRG*YHMGFG
Trigger: ACCAAAACCCATGTGATAGCAGCCTCGAAAGAAGCA...CTGTCTACAACAGATCGTTTCACAGATAATGCATGGAGAGGGGCAGAGGCTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR GCA 90 bp AGGTGTTGCGGTCTTTCCACTCCACTGGCACGTTACACTAACAGTGTTAATCTATGCTGTGAGCTTCTTTaGCACACGATATTGCCAGGT +
Preference number: 4 (lower is better)
Translates to: RCCGLSTPLARYTNSVNLCCELL*HTILPG
Trigger: ACCTGGCAATATCGTGTGGCAAAGAAGCTCACAGCA...TAGATTAACACTGTTAGTGTAACGTGCCAGTGGAGTGGAAAGACCGCAACACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR GCA 90 bp GTCATCTGCATCACCAGATCCAGTTTTCAGGAGCTGGAGTACTCTAAACCAATCTGCTGTGAGCTTCTTTaGCACACGATATTGCCAGGT +
Preference number: 4 (lower is better)
Translates to: VICITRSSFQELEYSKPICCELL*HTILPG
Trigger: ACCTGGCAATATCGTGTGGCAAAGAAGCTCACAGCA...GATTGGTTTAGAGTACTCCAGCTCCTGAAAACTGGATCTGGTGATGCAGATGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445063.5
CDS-3UTR GCA 90 bp CTGTCTTCAGTGCAGTGTCCACACATCCCTCATAGAGCTGCCTCTGTGCAAGTACTGATTAATTTCCAATaGTGTGAGCTTCTTTGCCAC +
Preference number: 4 (lower is better)
Translates to: LSSVQCPHIPHRAASVQVLINFQ*CELLCH
Trigger: GTGGCAAAGAAGCTCACAGCATTGGAAATTAATCAG...TACTTGCACAGAGGCAGCTCTATGAGGGATGTGTGGACACTGCACTGAAGACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR GCA 90 bp TGCAGTGTCCACACATCCCTCATAGAGCTGCCTCTGTGCAAGTATAAAGAAGTGTGTATCTCTGAATGGTaGCAGATTCACGACCCACAA +
Preference number: 4 (lower is better)
Translates to: CSVHTSLIELPLCKYKEVCISEW*QIHDPQ
Trigger: TTGTGGGTCGTGAATCTGGCACCATTCAGAGATACA...CACTTCTTTATACTTGCACAGAGGCAGCTCTATGAGGGATGTGTGGACACTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR GCA 90 bp AGAGTAGATCTCCACAGGAGGGATGATGTCTTCATAGTCTTTCAGGTGAAGAGCAACTCTCCAACTACTTaGTGTCCCGTACTGTCCGTT +
Preference number: 4 (lower is better)
Translates to: RVDLHRRDDVFIVFQVKSNSPTT*CPVLSV
Trigger: AACGGACAGTACGGGACAGCAAGTAGTTGGAGAGTT...GCTCTTCACCTGAAAGACTATGAAGACATCATCCCTCCTGTGGAGATCTACTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414212.5
CDS-3UTR GCA 90 bp TTCCTGAGCAAGGACACCGTGTTTGCATACACTGCACATCCAGAATTGATACTCAACCTTCTCAATCAGTaGTCGGCTATCTCGCAGAGA +
Preference number: 4 (lower is better)
Translates to: FLSKDTVFAYTAHPELILNLLNQ*SAISQR
Trigger: TCTCTGCGAGATAGCCGAGCACTGATTGAGAAGGTT...GAGTATCAATTCTGGATGTGCAGTGTATGCAAACACGGTGTCCTTGCTCAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR GCA 90 bp AGGTGTTGCGGTCTTTCCACTCCACTGGCACGTTACACTAACAGTGTTAATCTACAGCGCACAAATGCTTaGTCTGCAGTGTATAGATCC +
Preference number: 4 (lower is better)
Translates to: RCCGLSTPLARYTNSVNLQRTNA*SAVYRS
Trigger: GGATCTATACACTGCAGAGCAAGCATTTGTGCGCTG...TAGATTAACACTGTTAGTGTAACGTGCCAGTGGAGTGGAAAGACCGCAACACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR GCA 90 bp TACACTGCACATCCAGAATTGATACTCAGTGATTGGGCTTCCTGTGGCAACGCATGCCTTGGTAATCTTTaGAGCGCACAAATGCTTGCT +
Preference number: 4 (lower is better)
Translates to: YTAHPELILSDWASCGNACLGNL*SAQMLA
Trigger: AGCAAGCATTTGTGCGCTGCAAAGATTACCAAGGCA...TGCGTTGCCACAGGAAGCCCAATCACTGAGTATCAATTCTGGATGTGCAGTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR GCA 90 bp ACCTGCCGAAGTAGCCAACAACTTCAGCCTGTTTCATTGACTCACTCAGTAGTTCAGCCTCTTCAAACCTaGCGAAGTAGCCAACAACTT +
Preference number: 4 (lower is better)
Translates to: TCRSSQQLQPVSLTHSVVQPLQT*RSSQQL
Trigger: AAGTTGTTGGCTACTTCGGCAGGTTTGAAGAGGCTG...AACTACTGAGTGAGTCAATGAAACAGGCTGAAGTTGTTGGCTACTTCGGCAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445063.5
CDS-3UTR GCA 90 bp GTCCACACATCCCTCATAGAGCTGCCTCTGTGCAAGTATAAAGAAGTGGTAAGCCAGGAGACTGTCATCTaGATCACCAGATCCAGTTTT +
Preference number: 4 (lower is better)
Translates to: VHTSLIELPLCKYKEVVSQETVI*ITRSSF
Trigger: AAAACTGGATCTGGTGATGCAGATGACAGTCTCCTG...GCTTACCACTTCTTTATACTTGCACAGAGGCAGCTCTATGAGGGATGTGTGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR GCA 90 bp CTGCCTCTGTGCAAGTATAAAGAAGTGGTAAGCCTCTGCCCCTCTCCATGCATTGCAGGTATCTACTGCTaGCTTTGGTTGACTACATTT +
Preference number: 4 (lower is better)
Translates to: LPLCKYKEVVSLCPSPCIAGIYC*LWLTTF
Trigger: AAATGTAGTCAACCAAAGGCAGCAGTAGATACCTGC...AATGCATGGAGAGGGGCAGAGGCTTACCACTTCTTTATACTTGCACAGAGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414212.5
CDS-3UTR GCA 90 bp GCAGAAGTGGCCTCTGAACTTTTTCCTTTAACTTTTCCTCGCTGGGCATTCTTCCTCTGCCCCTCTCCATaGATTATCTGTGAAACGATC +
Preference number: 4 (lower is better)
Translates to: AEVASELFPLTFPRWAFFLCPSP*IICETI
Trigger: GATCGTTTCACAGATAATGCATGGAGAGGGGCAGAG...GAAGAATGCCCAGCGAGGAAAAGTTAAAGGAAAAAGTTCAGAGGCCACTTCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR CCA 90 bp AAGAGCTGTCTTCAGTGCAGTGTCCACACATCCCTCATAGAGCTGCCTCTGTGCCTATCACATGGGTTTTaGTCATTGCAACAAACAATG +
Preference number: 4 (lower is better)
Translates to: KSCLQCSVHTSLIELPLCLSHGF*SLQQTM
Trigger: CATTGTTTGTTGCAATGACCAAAACCCATGTGATAG...GCACAGAGGCAGCTCTATGAGGGATGTGTGGACACTGCACTGAAGACAGCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414212.5
CDS-3UTR CCA 90 bp AGCCTCTGCCCCTCTCCATGCATTATCTGTGAAACGATCTGTTGTAGACAGAACCCAGTTTTCAGGAGCTaGAGTACTCTAAACCAATCC +
Preference number: 4 (lower is better)
Translates to: SLCPSPCIICETICCRQNPVFRS*STLNQS
Trigger: GGATTGGTTTAGAGTACTCCAGCTCCTGAAAACTGG...GTTCTGTCTACAACAGATCGTTTCACAGATAATGCATGGAGAGGGGCAGAGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR CCA 90 bp CAGTGCAGTGTCCACACATCCCTCATAGAGCTGCCTCTGTGCAAGTATAAAGAACCAGTTTTCAGGAGCTaGAGTACTCTAAACCAATCC +
Preference number: 4 (lower is better)
Translates to: QCSVHTSLIELPLCKYKEPVFRS*STLNQS
Trigger: GGATTGGTTTAGAGTACTCCAGCTCCTGAAAACTGG...TTCTTTATACTTGCACAGAGGCAGCTCTATGAGGGATGTGTGGACACTGCACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR CCA 90 bp CTGCCTCTGTGCAAGTATAAAGAAGTGGTAAGCCTCTGCCCCTCTCCATGCATTCAAAGTAGTCTCCAATaGCATTGTTGGCTTGTTCCA +
Preference number: 4 (lower is better)
Translates to: LPLCKYKEVVSLCPSPCIQSSLQ*HCWLVP
Trigger: TGGAACAAGCCAACAATGCCATTGGAGACTACTTTG...AATGCATGGAGAGGGGCAGAGGCTTACCACTTCTTTATACTTGCACAGAGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR TCA 90 bp GTCATCTGCATCACCAGATCCAGTTTTCAGGAGCTGGAGTACTCTAAACCAATCGTGCCATGGTACCAATaGATTCCAGCAATGCTGATA +
Preference number: 4 (lower is better)
Translates to: VICITRSSFQELEYSKPIVPWYQ*IPAMLI
Trigger: TATCAGCATTGCTGGAATTCATTGGTACCATGGCAC...GATTGGTTTAGAGTACTCCAGCTCCTGAAAACTGGATCTGGTGATGCAGATGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445063.5
CDS-3UTR TCA 90 bp TATAAAGAAGTGGTAAGCCTCTGCCCCTCTCCATGCATTATCTGTGAAACGATCGGTAGACTGTATCTCTaGATGGTGCCAGATTCACGA +
Preference number: 4 (lower is better)
Translates to: YKEVVSLCPSPCIICETIGRLYL*MVPDSR
Trigger: TCGTGAATCTGGCACCATTCAGAGATACAGTCTACC...GATCGTTTCACAGATAATGCATGGAGAGGGGCAGAGGCTTACCACTTCTTTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR TCA 90 bp GTCCACACATCCCTCATAGAGCTGCCTCTGTGCAAGTATAAAGAAGTGGTAAGCGAAAGTCAGAACTCCTaGGATGTCTATGATAGCAAG +
Preference number: 4 (lower is better)
Translates to: VHTSLIELPLCKYKEVVSESQNS*DVYDSK
Trigger: CTTGCTATCATAGACATCTCAGGAGTTCTGACTTTC...GCTTACCACTTCTTTATACTTGCACAGAGGCAGCTCTATGAGGGATGTGTGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR TCA 90 bp CTGTCTTCAGTGCAGTGTCCACACATCCCTCATAGAGCTGCCTCTGTGCAAGTACAGGATCCAAGTTTCTaGAAACATACATTCTTGTCT +
Preference number: 4 (lower is better)
Translates to: LSSVQCPHIPHRAASVQVQDPSF*KHTFLS
Trigger: AGACAAGAATGTATGTTTTCAGAAACTTGGATCCTG...TACTTGCACAGAGGCAGCTCTATGAGGGATGTGTGGACACTGCACTGAAGACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR TCA 90 bp CCTGAGCAAGGACACCGTGTTTGCATACACTGCACATCCAGAATTGATACTCAGCTTTGTTCCATTGGTTaGGATGTACGCAGGTATCTA +
Preference number: 4 (lower is better)
Translates to: PEQGHRVCIHCTSRIDTQLCSIG*DVRRYL
Trigger: TAGATACCTGCGTACATCTCAACCAATGGAACAAAG...CTGAGTATCAATTCTGGATGTGCAGTGTATGCAAACACGGTGTCCTTGCTCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414212.5
CDS-3UTR TCA 90 bp TGGCTTGTTCCAGGAGACTGTCATCTGCATCACCAGATCCAGTTTTCAGGAGCTGTACATAGAGCTTCTTaGCACGTAAAGGTTTACTTC +
Preference number: 4 (lower is better)
Translates to: WLVPGDCHLHHQIQFSGAVHRAS*HVKVYF
Trigger: GAAGTAAACCTTTACGTGTCAAGAAGCTCTATGTAC...AGCTCCTGAAAACTGGATCTGGTGATGCAGATGACAGTCTCCTGGAACAAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445063.5
CDS-3UTR TCA 90 bp AGAGTAGATCTCCACAGGAGGGATGATGTCTTCATAGTCTTTCAGGTGAAGAGCCTGCACATCCAGAATTaGTACTCAGTGATTGGGCTT +
Preference number: 4 (lower is better)
Translates to: RVDLHRRDDVFIVFQVKSLHIQN*YSVIGL
Trigger: AAGCCCAATCACTGAGTATCAATTCTGGATGTGCAG...GCTCTTCACCTGAAAGACTATGAAGACATCATCCCTCCTGTGGAGATCTACTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414212.5
CDS-3UTR TCA 90 bp AGGTGTTGCGGTCTTTCCACTCCACTGGCACGTTACACTAACAGTGTTAATCTACAGGCACATTTCATCTaGTTGAGTCATCTGGCTCAA +
Preference number: 4 (lower is better)
Translates to: RCCGLSTPLARYTNSVNLQAHFI*LSHLAQ
Trigger: TTGAGCCAGATGACTCAATCAGATGAAATGTGCCTG...TAGATTAACACTGTTAGTGTAACGTGCCAGTGGAGTGGAAAGACCGCAACACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR TCA 90 bp AGGTGTTGCGGTCTTTCCACTCCACTGGCACGTTACACTAACAGTGTTAATCTAAAGGGGCTAGAGGCATaGCAATCGAATGAATTCTCA +
Preference number: 4 (lower is better)
Translates to: RCCGLSTPLARYTNSVNLKGLEA*QSNEFS
Trigger: TGAGAATTCATTCGATTGTCATGCCTCTAGCCCCTT...TAGATTAACACTGTTAGTGTAACGTGCCAGTGGAGTGGAAAGACCGCAACACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR TCA 90 bp AGGTGTTGCGGTCTTTCCACTCCACTGGCACGTTACACTAACAGTGTTAATCTAGTTTCCAAAGTTAGGTaGAGTCTGAGGAGTCAACAG +
Preference number: 4 (lower is better)
Translates to: RCCGLSTPLARYTNSVNLVSKVR*SLRSQQ
Trigger: CTGTTGACTCCTCAGACTTCACCTAACTTTGGAAAC...TAGATTAACACTGTTAGTGTAACGTGCCAGTGGAGTGGAAAGACCGCAACACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR TCA 90 bp AGGTGTTGCGGTCTTTCCACTCCACTGGCACGTTACACTAACAGTGTTAATCTAAGAATTAGGGGGAAATaGGAAGCCTCCAAAAGAGAG +
Preference number: 4 (lower is better)
Translates to: RCCGLSTPLARYTNSVNLRIRGK*EASKRE
Trigger: CTCTCTTTTGGAGGCTTCTCATTTCCCCCTAATTCT...TAGATTAACACTGTTAGTGTAACGTGCCAGTGGAGTGGAAAGACCGCAACACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR GCA 90 bp AAGAGCTGTCTTCAGTGCAGTGTCCACACATCCCTCATAGAGCTGCCTCTGTGCTTTGCATCATCTGTCTaGGTCTCTAATTTCAAAACT +
Preference number: 4 (lower is better)
Translates to: KSCLQCSVHTSLIELPLCFASSV*VSNFKT
Trigger: AGTTTTGAAATTAGAGACGCAGACAGATGATGCAAA...GCACAGAGGCAGCTCTATGAGGGATGTGTGGACACTGCACTGAAGACAGCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414212.5
CDS-3UTR GCA 90 bp GCCCCTCTCCATGCATTATCTGTGAAACGATCTGTTGTAGACAGAACTTCTTCTAAGGCCCCTCAATTTTaGATCATCTGTCTGCGTCTC +
Preference number: 4 (lower is better)
Translates to: APLHALSVKRSVVDRTSSKAPQF*IICLRL
Trigger: GAGACGCAGACAGATGATGCAAAATTGAGGGGCCTT...AGAAGAAGTTCTGTCTACAACAGATCGTTTCACAGATAATGCATGGAGAGGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000414212.5
CDS-3UTR GCA 90 bp ACCTGCCGAAGTAGCCAACAACTTCAGCCTGTTTCATTGACTCACTCAGTAGTTTGCCTACTACGTACATaGCAGTGTCAATCAAAACGG +
Preference number: 4 (lower is better)
Translates to: TCRSSQQLQPVSLTHSVVCLLRT*QCQSKR
Trigger: CCGTTTTGATTGACACTGGCATGTACGTAGTAGGCA...AACTACTGAGTGAGTCAATGAAACAGGCTGAAGTTGTTGGCTACTTCGGCAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445063.5
CDS-3UTR GCA 90 bp CATCTAGGCTCTAAATCTCTTCTCATAGCTCACTATTCCCAATCTGCAACATGCTGTGGTTCCACTGGATaGCTACTACGTACATGCCAG +
Preference number: 4 (lower is better)
Translates to: HLGSKSLLIAHYSQSATCCGSTG*LLRTCQ
Trigger: CTGGCATGTACGTAGTAGGCATCCAGTGGAACCACA...GCATGTTGCAGATTGGGAATAGTGAGCTATGAGAAGAGATTTAGAGCCTAGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR GCA 90 bp GCCTCAGGCACATTTCATCTGATTGAGTCATCTGGCTCAAGCGGCCACTCTGGTAAATTGGATCCCTTGTaGCTTGAATGGTTTTACTAT +
Preference number: 4 (lower is better)
Translates to: ASGTFHLIESSGSSGHSGKLDPL*LEWFYY
Trigger: ATAGTAAAACCATTCAAGGCACAAGGGATCCAATTT...ACCAGAGTGGCCGCTTGAGCCAGATGACTCAATCAGATGAAATGTGCCTGAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR GCA 90 bp TTCCTGAGCAAGGACACCGTGTTTGCATACACTGCACATCCAGAATTGATACTCTGTATCTCTGAATGGTaGCAGATTCACGACCCACAA +
Preference number: 4 (lower is better)
Translates to: FLSKDTVFAYTAHPELILCISEW*QIHDPQ
Trigger: TTGTGGGTCGTGAATCTGGCACCATTCAGAGATACA...GAGTATCAATTCTGGATGTGCAGTGTATGCAAACACGGTGTCCTTGCTCAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR GCA 90 bp GCCTCAGGCACATTTCATCTGATTGAGTCATCTGGCTCAAGCGGCCACTCTGGTCTCTATGAACTGAGATaGATCTTTAATTCCAACCTT +
Preference number: 4 (lower is better)
Translates to: ASGTFHLIESSGSSGHSGLYELR*IFNSNL
Trigger: AAGGTTGGAATTAAAGATGCATCTCAGTTCATAGAG...ACCAGAGTGGCCGCTTGAGCCAGATGACTCAATCAGATGAAATGTGCCTGAGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR GCA 90 bp AGGTGTTGCGGTCTTTCCACTCCACTGGCACGTTACACTAACAGTGTTAATCTATACGCAGGTATCTACTaGTGCCTTTGGTTGACTACA +
Preference number: 4 (lower is better)
Translates to: RCCGLSTPLARYTNSVNLYAGIY*CLWLTT
Trigger: TGTAGTCAACCAAAGGCAGCAGTAGATACCTGCGTA...TAGATTAACACTGTTAGTGTAACGTGCCAGTGGAGTGGAAAGACCGCAACACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR GCA 90 bp AGAGTAGATCTCCACAGGAGGGATGATGTCTTCATAGTCTTTCAGGTGAAGAGCTACGCAGGTATCTACTaGTGCCTTTGGTTGACTACA +
Preference number: 4 (lower is better)
Translates to: RVDLHRRDDVFIVFQVKSYAGIY*CLWLTT
Trigger: TGTAGTCAACCAAAGGCAGCAGTAGATACCTGCGTA...GCTCTTCACCTGAAAGACTATGAAGACATCATCCCTCCTGTGGAGATCTACTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414212.5
CDS-3UTR GCA 90 bp GTGGCCTCTGAACTTTTTCCTTTAACTTTTCCTCGCTGGGCATTCTTCATCTGTCTCTGCCCCTCTCCATaGATTATCTGTGAAACGATC +
Preference number: 4 (lower is better)
Translates to: VASELFPLTFPRWAFFICLCPSP*IICETI
Trigger: GATCGTTTCACAGATAATGCATGGAGAGGGGCAGAG...ACAGATGAAGAATGCCCAGCGAGGAAAAGTTAAAGGAAAAAGTTCAGAGGCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR GCA 90 bp AGGAGTCAACAGGTGATTCTAGAACTAAAGCAAATGAAAGTGCAACCAACAAATTTTGCCCCACTCCCATaGTTCCCCCACTCCCTACTC +
Preference number: 4 (lower is better)
Translates to: RSQQVILELKQMKVQPTNFAPLP*FPHSLL
Trigger: GAGTAGGGAGTGGGGGAAGCATGGGAGTGGGGCAAA...ATTTGTTGGTTGCACTTTCATTTGCTTTAGTTCTAGAATCACCTGTTGACTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CCA 90 bp TTCCTGAGCAAGGACACCGTGTTTGCATACACTGCACATCCAGAATTGATACTCGCAGACCATGTTACATaGGATAGCTGTATACCCTTC +
Preference number: 4 (lower is better)
Translates to: FLSKDTVFAYTAHPELILADHVT*DSCIPF
Trigger: GAAGGGTATACAGCTATCCCATGTAACATGGTCTGC...GAGTATCAATTCTGGATGTGCAGTGTATGCAAACACGGTGTCCTTGCTCAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414212.5
CDS-3UTR CCA 90 bp GCCTCAGGCACATTTCATCTGATTGAGTCATCTGGCTCAAGCGGCCACTCTGGTATCAAAACGGGATTTTaGTCATTCTCATGTCTCATT +
Preference number: 4 (lower is better)
Translates to: ASGTFHLIESSGSSGHSGIKTGF*SFSCLI
Trigger: AATGAGACATGAGAATGACCAAAATCCCGTTTTGAT...ACCAGAGTGGCCGCTTGAGCCAGATGACTCAATCAGATGAAATGTGCCTGAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CCA 90 bp TGCTGTCCCGTACTGTCCGTTACTCGAGCATCCAAGTCAAAGAAAGTCAGAACTCTGGACGATCAGGTCTaGTATATGCATAAACTACAG +
Preference number: 4 (lower is better)
Translates to: CCPVLSVTRASKSKKVRTLDDQV*YMHKLQ
Trigger: CTGTAGTTTATGCATATACCAGACCTGATCGTCCAG...AGTTCTGACTTTCTTTGACTTGGATGCTCGAGTAACGGACAGTACGGGACAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445063.5
CDS-3UTR CCA 90 bp TCTGCATCACCAGATCCAGTTTTCAGGAGCTGGAGTACTCTAAACCAATCCCCCGACAACACAATATTCTaGACGATCAGGTCTGGTATA +
Preference number: 4 (lower is better)
Translates to: SASPDPVFRSWSTLNQSPDNTIF*TIRSGI
Trigger: TATACCAGACCTGATCGTCCAGAATATTGTGTTGTC...GGGGGATTGGTTTAGAGTACTCCAGCTCCTGAAAACTGGATCTGGTGATGCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445063.5
CDS-3UTR CCA 90 bp GCAGAAGTGGCCTCTGAACTTTTTCCTTTAACTTTTCCTCGCTGGGCATTCTTCGAGGCTGCTATCACATaGGTTTTGGTCATTGCAACA +
Preference number: 4 (lower is better)
Translates to: AEVASELFPLTFPRWAFFEAAIT*VLVIAT
Trigger: TGTTGCAATGACCAAAACCCATGTGATAGCAGCCTC...GAAGAATGCCCAGCGAGGAAAAGTTAAAGGAAAAAGTTCAGAGGCCACTTCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR CCA 90 bp GTCATCTGCATCACCAGATCCAGTTTTCAGGAGCTGGAGTACTCTAAACCAATCGAGGCTGCTATCACATaGGTTTTGGTCATTGCAACA +
Preference number: 4 (lower is better)
Translates to: VICITRSSFQELEYSKPIEAAIT*VLVIAT
Trigger: TGTTGCAATGACCAAAACCCATGTGATAGCAGCCTC...GATTGGTTTAGAGTACTCCAGCTCCTGAAAACTGGATCTGGTGATGCAGATGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445063.5
CDS-3UTR CCA 90 bp GCAAACAAATCAGGATTATCTTTGGCCCACTTCATATCCCAGACATCTCTTCGTCCAAAGTCGGGGGTGTaGATTGTCCTCTATGAACTG +
Preference number: 4 (lower is better)
Translates to: ANKSGLSLAHFISQTSLRPKSGV*IVLYEL
Trigger: CAGTTCATAGAGGACAATCCACACCCCCGACTTTGG...ACGAAGAGATGTCTGGGATATGAAGTGGGCCAAAGATAATCCTGATTTGTTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445063.5
CDS-3UTR CCA 90 bp GTCCTGCAGGAACCTTTCAGACAGGCAGAACTAATAAGTGTGCCATCCCTACAACAAAGTAGTCTCCAATaGCATTGTTGGCTTGTTCCA +
Preference number: 4 (lower is better)
Translates to: VLQEPFRQAELISVPSLQQSSLQ*HCWLVP
Trigger: TGGAACAAGCCAACAATGCCATTGGAGACTACTTTG...TTGTAGGGATGGCACACTTATTAGTTCTGCCTGTCTGAAAGGTTCCTGCAGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CCA 90 bp GTCCACACATCCCTCATAGAGCTGCCTCTGTGCAAGTATAAAGAAGTGGTAAGCCAAAGTAGTCTCCAATaGCATTGTTGGCTTGTTCCA +
Preference number: 4 (lower is better)
Translates to: VHTSLIELPLCKYKEVVSQSSLQ*HCWLVP
Trigger: TGGAACAAGCCAACAATGCCATTGGAGACTACTTTG...GCTTACCACTTCTTTATACTTGCACAGAGGCAGCTCTATGAGGGATGTGTGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR CCA 90 bp CCACTGGACTATGGCATAAGGGGCAGAAGCTGTAGTGGCTTATTTCCTGAGCAATTTCTGGAAGTGAAATaGCAAGGTTCTCTAACCCTT +
Preference number: 4 (lower is better)
Translates to: PLDYGIRGRSCSGLFPEQFLEVK*QGSLTL
Trigger: AAGGGTTAGAGAACCTTGCCATTTCACTTCCAGAAA...TTGCTCAGGAAATAAGCCACTACAGCTTCTGCCCCTTATGCCATAGTCCAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR CCA 90 bp GTCCTGCAGGAACCTTTCAGACAGGCAGAACTAATAAGTGTGCCATCCCTACAAACAGCTTTGTTCCATTaGTTGAGATGTACGCAGGTA +
Preference number: 4 (lower is better)
Translates to: VLQEPFRQAELISVPSLQTALFH*LRCTQV
Trigger: TACCTGCGTACATCTCAACCAATGGAACAAAGCTGT...TTGTAGGGATGGCACACTTATTAGTTCTGCCTGTCTGAAAGGTTCCTGCAGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CCA 90 bp GTAAGCCTCTGCCCCTCTCCATGCATTATCTGTGAAACGATCTGTTGTAGACAGACAGCTTTGTTCCATTaGTTGAGATGTACGCAGGTA +
Preference number: 4 (lower is better)
Translates to: VSLCPSPCIICETICCRQTALFH*LRCTQV
Trigger: TACCTGCGTACATCTCAACCAATGGAACAAAGCTGT...CTGTCTACAACAGATCGTTTCACAGATAATGCATGGAGAGGGGCAGAGGCTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414212.5
CDS-3UTR CCA 90 bp ATGATGCTGTCTTCAATATACTACCTAATTCTGTTTATGCAACTTCTCACCAGGTCCCAAAGGCTCTGCTaGCGCATGCGCAGAGTGCTA +
Preference number: 4 (lower is better)
Translates to: MMLSSIYYLILFMQLLTRSQRLC*RMRRVL
Trigger: TAGCACTCTGCGCATGCGCCAGCAGAGCCTTTGGGA...CCTGGTGAGAAGTTGCATAAACAGAATTAGGTAGTATATTGAAGACAGCATCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CCA 90 bp CAGCATTCAACCACTTTTGTCGATCAGCAAAGTAGTCTCCAATGGCATTGTTGGTTGATACTCAGTGATTaGGCTTCCTGTGGCAACGCA +
Preference number: 4 (lower is better)
Translates to: QHSTTFVDQQSSLQWHCWLILSD*ASCGNA
Trigger: TGCGTTGCCACAGGAAGCCCAATCACTGAGTATCAA...CCAACAATGCCATTGGAGACTACTTTGCTGATCGACAAAAGTGGTTGAATGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445063.5
CDS-3UTR CCA 90 bp GTCCTGCAGGAACCTTTCAGACAGGCAGAACTAATAAGTGTGCCATCCCTACAAGGAATAATTCGTTGGTaGGAAAATTCTAGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: VLQEPFRQAELISVPSLQGIIRW*ENSRAQ
Trigger: CTGAGCCCTAGAATTTTCCCACCAACGAATTATTCC...TTGTAGGGATGGCACACTTATTAGTTCTGCCTGTCTGAAAGGTTCCTGCAGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CCA 90 bp GTCCTGCAGGAACCTTTCAGACAGGCAGAACTAATAAGTGTGCCATCCCTACAACCTGGAATAATTCGTTaGTGGGAAAATTCTAGGGCT +
Preference number: 4 (lower is better)
Translates to: VLQEPFRQAELISVPSLQPGIIR*WENSRA
Trigger: AGCCCTAGAATTTTCCCACCAACGAATTATTCCAGG...TTGTAGGGATGGCACACTTATTAGTTCTGCCTGTCTGAAAGGTTCCTGCAGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR TCA 90 bp TTCCTGAGCAAGGACACCGTGTTTGCATACACTGCACATCCAGAATTGATACTCGAAAGTCAGAACTCCTaGGATGTCTATGATAGCAAG +
Preference number: 4 (lower is better)
Translates to: FLSKDTVFAYTAHPELILESQNS*DVYDSK
Trigger: CTTGCTATCATAGACATCTCAGGAGTTCTGACTTTC...GAGTATCAATTCTGGATGTGCAGTGTATGCAAACACGGTGTCCTTGCTCAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR TCA 90 bp TGGCTTGTTCCAGGAGACTGTCATCTGCATCACCAGATCCAGTTTTCAGGAGCTCAGGATCCAAGTTTCTaGAAACATACATTCTTGTCT +
Preference number: 4 (lower is better)
Translates to: WLVPGDCHLHHQIQFSGAQDPSF*KHTFLS
Trigger: AGACAAGAATGTATGTTTTCAGAAACTTGGATCCTG...AGCTCCTGAAAACTGGATCTGGTGATGCAGATGACAGTCTCCTGGAACAAGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445063.5
CDS-3UTR TCA 90 bp AGGTGTTGCGGTCTTTCCACTCCACTGGCACGTTACACTAACAGTGTTAATCTACTTTGTTCCATTGGTTaGGATGTACGCAGGTATCTA +
Preference number: 4 (lower is better)
Translates to: RCCGLSTPLARYTNSVNLLCSIG*DVRRYL
Trigger: TAGATACCTGCGTACATCTCAACCAATGGAACAAAG...TAGATTAACACTGTTAGTGTAACGTGCCAGTGGAGTGGAAAGACCGCAACACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR GCA 90 bp ATGATGCTGTCTTCAATATACTACCTAATTCTGTTTATGCAACTTCTCACCAGGCCACAGCTAACACGCTaGCCATGTGGTTCCACTGGA +
Preference number: 4 (lower is better)
Translates to: MMLSSIYYLILFMQLLTRPQLTR*PCGSTG
Trigger: TCCAGTGGAACCACATGGGCAGCGTGTTAGCTGTGG...CCTGGTGAGAAGTTGCATAAACAGAATTAGGTAGTATATTGAAGACAGCATCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR GCA 90 bp TTTCTGATTTGGGGAAATTTCCCATTCTGGTATAGAACAAATGAGAAAGCTGGATTTGTCCTGCATGGCTaGCTTCTGGAAGCCTGCCAC +
Preference number: 4 (lower is better)
Translates to: FLIWGNFPFWYRTNEKAGFVLHG*LLEACH
Trigger: GTGGCAGGCTTCCAGAAGGCAGCCATGCAGGACAAA...TCCAGCTTTCTCATTTGTTCTATACCAGAATGGGAAATTTCCCCAAATCAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR GCA 90 bp CAACTCTCCAACTACTTGCTGTCCCGTACTGTCCGTTACTCGAGCATCCAAGTCTGTCTTCTCCATCATTaGAAACAAATCAGGATTATC +
Preference number: 4 (lower is better)
Translates to: QLSNYLLSRTVRYSSIQVCLLHH*KQIRII
Trigger: GATAATCCTGATTTGTTTGCAATGATGGAGAAGACA...GACTTGGATGCTCGAGTAACGGACAGTACGGGACAGCAAGTAGTTGGAGAGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445063.5
CDS-3UTR GCA 90 bp CTGTCTTCAGTGCAGTGTCCACACATCCCTCATAGAGCTGCCTCTGTGCAAGTACTCTATGAACTGAGATaGATCTTTAATTCCAACCTT +
Preference number: 4 (lower is better)
Translates to: LSSVQCPHIPHRAASVQVLYELR*IFNSNL
Trigger: AAGGTTGGAATTAAAGATGCATCTCAGTTCATAGAG...TACTTGCACAGAGGCAGCTCTATGAGGGATGTGTGGACACTGCACTGAAGACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR GCA 90 bp GTCCTGCAGGAACCTTTCAGACAGGCAGAACTAATAAGTGTGCCATCCCTACAACAAAAATGCAGTCACTaGTTGTTCACACATTCCAAC +
Preference number: 4 (lower is better)
Translates to: VLQEPFRQAELISVPSLQQKCSH*LFTHSN
Trigger: GTTGGAATGTGTGAACAAGCAGTGACTGCATTTTTG...TTGTAGGGATGGCACACTTATTAGTTCTGCCTGTCTGAAAGGTTCCTGCAGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR GCA 90 bp AGGCCAATAGCAAGATCCCTTCTGTCCATCTCGAGATACGTTCTTTCAGCCTCTATAGAGCTGCCTCTGTaGAAGTATAAAGAAGTGGTA +
Preference number: 4 (lower is better)
Translates to: RPIARSLLSISRYVLSASIELPL*KYKEVV
Trigger: TACCACTTCTTTATACTTGCACAGAGGCAGCTCTAT...AGAGGCTGAAAGAACGTATCTCGAGATGGACAGAAGGGATCTTGCTATTGGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445063.5
CDS-3UTR GCA 90 bp GCATACACTGCACATCCAGAATTGATACTCAGTGATTGGGCTTCCTGTGGCAACCGTGTTTGCATACACTaGACATCCAGAATTGATACT +
Preference number: 4 (lower is better)
Translates to: AYTAHPELILSDWASCGNRVCIH*TSRIDT
Trigger: AGTATCAATTCTGGATGTGCAGTGTATGCAAACACG...GTTGCCACAGGAAGCCCAATCACTGAGTATCAATTCTGGATGTGCAGTGTATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR GCA 90 bp TATTTCCTGAGCAAGGACACCGTGTTTGCATACACTGCACATCCAGAATTGATACAAGGACACCGTGTTTaGATACACTGCACATCCAGA +
Preference number: 4 (lower is better)
Translates to: YFLSKDTVFAYTAHPELIQGHRV*IHCTSR
Trigger: TCTGGATGTGCAGTGTATGCAAACACGGTGTCCTTG...TATCAATTCTGGATGTGCAGTGTATGCAAACACGGTGTCCTTGCTCAGGAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR GCA 90 bp AGGTGTTGCGGTCTTTCCACTCCACTGGCACGTTACACTAACAGTGTTAATCTAAGTCCTGTGGAAAGATaGAAGTTCAACAGGAGATGT +
Preference number: 4 (lower is better)
Translates to: RCCGLSTPLARYTNSVNLSPVER*KFNRRC
Trigger: ACATCTCCTGTTGAACTTGCATCTTTCCACAGGACT...TAGATTAACACTGTTAGTGTAACGTGCCAGTGGAGTGGAAAGACCGCAACACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR GCA 90 bp TTGATACTCAGTGATTGGGCTTCCTGTGGCAACGCATGTTGGCAGTTTCCCTTCTTTACTTCCTTTCTTTaGCTCTTCATCTGCAATTGG +
Preference number: 4 (lower is better)
Translates to: LILSDWASCGNACWQFPFFTSFL*LFICNW
Trigger: CCAATTGCAGATGAAGAGGCAAAGAAAGGAAGTAAA...GAAGGGAAACTGCCAACATGCGTTGCCACAGGAAGCCCAATCACTGAGTATCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445063.5
CDS-3UTR CCA 90 bp GTCCTGCAGGAACCTTTCAGACAGGCAGAACTAATAAGTGTGCCATCCCTACAAGCAGCTTCACGTTATTaGGAATGGAAATTTTCTTGC +
Preference number: 4 (lower is better)
Translates to: VLQEPFRQAELISVPSLQAASRY*EWKFSC
Trigger: GCAAGAAAATTTCCATTCCCAATAACGTGAAGCTGC...TTGTAGGGATGGCACACTTATTAGTTCTGCCTGTCTGAAAGGTTCCTGCAGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CCA 90 bp CTTGTTAGGCACACTGCTTATTTGTACAGCTTTATCAGTCAGTTCCATCATTTCAACACGCTGCCCATGTaGTTCCACTGGATGCCTACT +
Preference number: 4 (lower is better)
Translates to: LVRHTAYLYSFISQFHHFNTLPM*FHWMPT
Trigger: AGTAGGCATCCAGTGGAACCACATGGGCAGCGTGTT...GAAATGATGGAACTGACTGATAAAGCTGTACAAATAAGCAGTGTGCCTAACAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CCA 90 bp ATGATGCTGTCTTCAATATACTACCTAATTCTGTTTATGCAACTTCTCACCAGGTGCATGGCTGCCTTCTaGAAGCCTGCCACAGCTAAC +
Preference number: 4 (lower is better)
Translates to: MMLSSIYYLILFMQLLTRCMAAF*KPATAN
Trigger: GTTAGCTGTGGCAGGCTTCCAGAAGGCAGCCATGCA...CCTGGTGAGAAGTTGCATAAACAGAATTAGGTAGTATATTGAAGACAGCATCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CCA 90 bp GTCCACACATCCCTCATAGAGCTGCCTCTGTGCAAGTATAAAGAAGTGGTAAGCGACAACACAATATTCTaGACGATCAGGTCTGGTATA +
Preference number: 4 (lower is better)
Translates to: VHTSLIELPLCKYKEVVSDNTIF*TIRSGI
Trigger: TATACCAGACCTGATCGTCCAGAATATTGTGTTGTC...GCTTACCACTTCTTTATACTTGCACAGAGGCAGCTCTATGAGGGATGTGTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR CCA 90 bp GCATACACTGCACATCCAGAATTGATACTCAGTGATTGGGCTTCCTGTGGCAACAGTTATGGCACAAATTaGATCCCTTGTGCCTTGAAT +
Preference number: 4 (lower is better)
Translates to: AYTAHPELILSDWASCGNSYGTN*IPCALN
Trigger: ATTCAAGGCACAAGGGATCCAATTTGTGCCATAACT...GTTGCCACAGGAAGCCCAATCACTGAGTATCAATTCTGGATGTGCAGTGTATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR CCA 90 bp CAGTGCAGTGTCCACACATCCCTCATAGAGCTGCCTCTGTGCAAGTATAAAGAATATCTGATGCAGTTATaGCACAAATTGGATCCCTTG +
Preference number: 4 (lower is better)
Translates to: QCSVHTSLIELPLCKYKEYLMQL*HKLDPL
Trigger: CAAGGGATCCAATTTGTGCCATAACTGCATCAGATA...TTCTTTATACTTGCACAGAGGCAGCTCTATGAGGGATGTGTGGACACTGCACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR CCA 90 bp GCATACACTGCACATCCAGAATTGATACTCAGTGATTGGGCTTCCTGTGGCAACAATCAGGATTATCTTTaGCCCACTTCATATCCCAGA +
Preference number: 4 (lower is better)
Translates to: AYTAHPELILSDWASCGNNQDYL*PTSYPR
Trigger: TCTGGGATATGAAGTGGGCCAAAGATAATCCTGATT...GTTGCCACAGGAAGCCCAATCACTGAGTATCAATTCTGGATGTGCAGTGTATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR CCA 90 bp CATCTAGGCTCTAAATCTCTTCTCATAGCTCACTATTCCCAATCTGCAACATGCATCCAGAGGTCTGAATaGGTTCCTCAGGATCCAAGT +
Preference number: 4 (lower is better)
Translates to: HLGSKSLLIAHYSQSATCIQRSE*VPQDPS
Trigger: ACTTGGATCCTGAGGAACCCATTCAGACCTCTGGAT...GCATGTTGCAGATTGGGAATAGTGAGCTATGAGAAGAGATTTAGAGCCTAGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CCA 90 bp CTGCCTCTGTGCAAGTATAAAGAAGTGGTAAGCCTCTGCCCCTCTCCATGCATTACTGGAAGTAACTTGTaGTTTTCTGGAAGTGAAATG +
Preference number: 4 (lower is better)
Translates to: LPLCKYKEVVSLCPSPCITGSNL*FSGSEM
Trigger: CATTTCACTTCCAGAAAACCACAAGTTACTTCCAGT...AATGCATGGAGAGGGGCAGAGGCTTACCACTTCTTTATACTTGCACAGAGGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414212.5
CDS-3UTR TCA 90 bp CATCTAGGCTCTAAATCTCTTCTCATAGCTCACTATTCCCAATCTGCAACATGCCGAGACCGTGTGATCTaGTTAATTTCCAATGCTGTG +
Preference number: 4 (lower is better)
Translates to: HLGSKSLLIAHYSQSATCRDRVI*LISNAV
Trigger: CACAGCATTGGAAATTAATCAGATCACACGGTCTCG...GCATGTTGCAGATTGGGAATAGTGAGCTATGAGAAGAGATTTAGAGCCTAGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR TCA 90 bp GCAAACAAATCAGGATTATCTTTGGCCCACTTCATATCCCAGACATCTCTTCGTCGAGACCGTGTGATCTaGTTAATTTCCAATGCTGTG +
Preference number: 4 (lower is better)
Translates to: ANKSGLSLAHFISQTSLRRDRVI*LISNAV
Trigger: CACAGCATTGGAAATTAATCAGATCACACGGTCTCG...ACGAAGAGATGTCTGGGATATGAAGTGGGCCAAAGATAATCCTGATTTGTTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445063.5
CDS-3UTR TCA 90 bp GTCCTGCAGGAACCTTTCAGACAGGCAGAACTAATAAGTGTGCCATCCCTACAATTGTCCTCTATGAACTaGGATGCATCTTTAATTCCA +
Preference number: 4 (lower is better)
Translates to: VLQEPFRQAELISVPSLQLSSMN*DASLIP
Trigger: TGGAATTAAAGATGCATCTCAGTTCATAGAGGACAA...TTGTAGGGATGGCACACTTATTAGTTCTGCCTGTCTGAAAGGTTCCTGCAGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR TCA 90 bp CATCTAGGCTCTAAATCTCTTCTCATAGCTCACTATTCCCAATCTGCAACATGCTATAGATCCAGTTTCTaGAGAGCTGCTTCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: HLGSKSLLIAHYSQSATCYRSSF*RAASAS
Trigger: ACTGGCTGAAGCAGCTCTTCAGAAACTGGATCTATA...GCATGTTGCAGATTGGGAATAGTGAGCTATGAGAAGAGATTTAGAGCCTAGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR TCA 90 bp AGAGTAGATCTCCACAGGAGGGATGATGTCTTCATAGTCTTTCAGGTGAAGAGCGTACATAGAGCTTCTTaGCACGTAAAGGTTTACTTC +
Preference number: 4 (lower is better)
Translates to: RVDLHRRDDVFIVFQVKSVHRAS*HVKVYF
Trigger: GAAGTAAACCTTTACGTGTCAAGAAGCTCTATGTAC...GCTCTTCACCTGAAAGACTATGAAGACATCATCCCTCCTGTGGAGATCTACTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414212.5
CDS-3UTR TCA 90 bp GTCCTGCAGGAACCTTTCAGACAGGCAGAACTAATAAGTGTGCCATCCCTACAATTTAATGAAAGCTTTTaGACAAGTCCCAAAGGCTCT +
Preference number: 4 (lower is better)
Translates to: VLQEPFRQAELISVPSLQFNESF*TSPKGS
Trigger: AGAGCCTTTGGGACTTGTTCAAAAGCTTTCATTAAA...TTGTAGGGATGGCACACTTATTAGTTCTGCCTGTCTGAAAGGTTCCTGCAGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR TCA 90 bp TTTTATTTGGTTTATAAGGCTTTCTGTTCCATGACCTCTGGAATAGCTTGCGAGTCAATTACCCACTGGTaGCACTCATTCTGGCCTGTC +
Preference number: 4 (lower is better)
Translates to: FYLVYKAFCSMTSGIACESITHW*HSFWPV
Trigger: GACAGGCCAGAATGAGTGTCACCAGTGGGTAATTGA...CTCGCAAGCTATTCCAGAGGTCATGGAACAGAAAGCCTTATAAACCAAATAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR GCA 90 bp TACACTGCACATCCAGAATTGATACTCAGTGATTGGGCTTCCTGTGGCAACGCAGAATGGAAATTTTCTTaGTCAGGTAGAAGAACATCG +
Preference number: 4 (lower is better)
Translates to: YTAHPELILSDWASCGNAEWKFS*SGRRTS
Trigger: CGATGTTCTTCTACCTGAGCAAGAAAATTTCCATTC...TGCGTTGCCACAGGAAGCCCAATCACTGAGTATCAATTCTGGATGTGCAGTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414212.5
CDS-3UTR GCA 90 bp CATCTAGGCTCTAAATCTCTTCTCATAGCTCACTATTCCCAATCTGCAACATGCTTCCAGGATACACACTaGAGCTTCACGTTATTGGGA +
Preference number: 4 (lower is better)
Translates to: HLGSKSLLIAHYSQSATCFQDTH*SFTLLG
Trigger: TCCCAATAACGTGAAGCTGCAGTGTGTATCCTGGAA...GCATGTTGCAGATTGGGAATAGTGAGCTATGAGAAGAGATTTAGAGCCTAGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR GCA 90 bp CATCTAGGCTCTAAATCTCTTCTCATAGCTCACTATTCCCAATCTGCAACATGCTGCCTACTACGTACATaGCAGTGTCAATCAAAACGG +
Preference number: 4 (lower is better)
Translates to: HLGSKSLLIAHYSQSATCCLLRT*QCQSKR
Trigger: CCGTTTTGATTGACACTGGCATGTACGTAGTAGGCA...GCATGTTGCAGATTGGGAATAGTGAGCTATGAGAAGAGATTTAGAGCCTAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR GCA 90 bp AAGTCTGAGGAGTCAACAGGTGATTCTAGAACTAAAGCAAATGAAAGTGCAACCTTCACATCTTTGTCCTaGATGGCTGCCTTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: KSEESTGDSRTKANESATFTSLS*MAAFWK
Trigger: CTTCCAGAAGGCAGCCATGCAGGACAAAGATGTGAA...GGTTGCACTTTCATTTGCTTTAGTTCTAGAATCACCTGTTGACTCCTCAGACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR GCA 90 bp TTGATACTCAGTGATTGGGCTTCCTGTGGCAACGCATGTTGGCAGTTTCCCTTCAAATTGGATCCCTTGTaGCTTGAATGGTTTTACTAT +
Preference number: 4 (lower is better)
Translates to: LILSDWASCGNACWQFPFKLDPL*LEWFYY
Trigger: ATAGTAAAACCATTCAAGGCACAAGGGATCCAATTT...GAAGGGAAACTGCCAACATGCGTTGCCACAGGAAGCCCAATCACTGAGTATCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR GCA 90 bp AAGTCTGAGGAGTCAACAGGTGATTCTAGAACTAAAGCAAATGAAAGTGCAACCAACTCTCCAACTACTTaGTGTCCCGTACTGTCCGTT +
Preference number: 4 (lower is better)
Translates to: KSEESTGDSRTKANESATNSPTT*CPVLSV
Trigger: AACGGACAGTACGGGACAGCAAGTAGTTGGAGAGTT...GGTTGCACTTTCATTTGCTTTAGTTCTAGAATCACCTGTTGACTCCTCAGACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR GCA 90 bp AAGTCTGAGGAGTCAACAGGTGATTCTAGAACTAAAGCAAATGAAAGTGCAACCAACCTTCTCAATCAGTaGTCGGCTATCTCGCAGAGA +
Preference number: 4 (lower is better)
Translates to: KSEESTGDSRTKANESATNLLNQ*SAISQR
Trigger: TCTCTGCGAGATAGCCGAGCACTGATTGAGAAGGTT...GGTTGCACTTTCATTTGCTTTAGTTCTAGAATCACCTGTTGACTCCTCAGACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR GCA 90 bp CATCTAGGCTCTAAATCTCTTCTCATAGCTCACTATTCCCAATCTGCAACATGCCAGGAGACTGTCATCTaGATCACCAGATCCAGTTTT +
Preference number: 4 (lower is better)
Translates to: HLGSKSLLIAHYSQSATCQETVI*ITRSSF
Trigger: AAAACTGGATCTGGTGATGCAGATGACAGTCTCCTG...GCATGTTGCAGATTGGGAATAGTGAGCTATGAGAAGAGATTTAGAGCCTAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR GCA 90 bp GCAGAAGTGGCCTCTGAACTTTTTCCTTTAACTTTTCCTCGCTGGGCATTCTTCCAAAAATGCAGTCACTaGTTGTTCACACATTCCAAC +
Preference number: 4 (lower is better)
Translates to: AEVASELFPLTFPRWAFFQKCSH*LFTHSN
Trigger: GTTGGAATGTGTGAACAAGCAGTGACTGCATTTTTG...GAAGAATGCCCAGCGAGGAAAAGTTAAAGGAAAAAGTTCAGAGGCCACTTCTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000414212.5
CDS-3UTR GCA 90 bp CAGTGCAGTGTCCACACATCCCTCATAGAGCTGCCTCTGTGCAAGTATAAAGAAATCTGTTCATGGTATTaGTCTATAAGTAAGGCTGAC +
Preference number: 4 (lower is better)
Translates to: QCSVHTSLIELPLCKYKEICSWY*SISKAD
Trigger: GTCAGCCTTACTTATAGAGCAATACCATGAACAGAT...TTCTTTATACTTGCACAGAGGCAGCTCTATGAGGGATGTGTGGACACTGCACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR GCA 90 bp CTGTGCAAGTATAAAGAAGTGGTAAGCCTCTGCCCCTCTCCATGCATTATCTGTATAGAGCTGCCTCTGTaGAAGTATAAAGAAGTGGTA +
Preference number: 4 (lower is better)
Translates to: LCKYKEVVSLCPSPCIICIELPL*KYKEVV
Trigger: TACCACTTCTTTATACTTGCACAGAGGCAGCTCTAT...ACAGATAATGCATGGAGAGGGGCAGAGGCTTACCACTTCTTTATACTTGCACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR GCA 90 bp AGGTGTTGCGGTCTTTCCACTCCACTGGCACGTTACACTAACAGTGTTAATCTACGTGTTTGCATACACTaGACATCCAGAATTGATACT +
Preference number: 4 (lower is better)
Translates to: RCCGLSTPLARYTNSVNLRVCIH*TSRIDT
Trigger: AGTATCAATTCTGGATGTGCAGTGTATGCAAACACG...TAGATTAACACTGTTAGTGTAACGTGCCAGTGGAGTGGAAAGACCGCAACACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR GCA 90 bp AAGTCTGAGGAGTCAACAGGTGATTCTAGAACTAAAGCAAATGAAAGTGCAACCCAAGGACACCGTGTTTaGATACACTGCACATCCAGA +
Preference number: 4 (lower is better)
Translates to: KSEESTGDSRTKANESATQGHRV*IHCTSR
Trigger: TCTGGATGTGCAGTGTATGCAAACACGGTGTCCTTG...GGTTGCACTTTCATTTGCTTTAGTTCTAGAATCACCTGTTGACTCCTCAGACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR GCA 90 bp AATCAGGATTATCTTTGGCCCACTTCATATCCCAGACATCTCTTCGTTCCAATTCAAGGACACCGTGTTTaGATACACTGCACATCCAGA +
Preference number: 4 (lower is better)
Translates to: NQDYLWPTSYPRHLFVPIQGHRV*IHCTSR
Trigger: TCTGGATGTGCAGTGTATGCAAACACGGTGTCCTTG...AATTGGAACGAAGAGATGTCTGGGATATGAAGTGGGCCAAAGATAATCCTGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445063.5
CDS-3UTR CCA 90 bp CTTTGCCTCTTCATCTGCAATCTAGCTAACAGAGATCCAATTTCTTTCATACTAAACACGCTGCCCATGTaGTTCCACTGGATGCCTACT +
Preference number: 4 (lower is better)
Translates to: LCLFICNLANRDPISFILNTLPM*FHWMPT
Trigger: AGTAGGCATCCAGTGGAACCACATGGGCAGCGTGTT...TAGTATGAAAGAAATTGGATCTCTGTTAGCTAGATTGCAGATGAAGAGGCAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414212.5
CDS-3UTR CCA 90 bp GTCCACACATCCCTCATAGAGCTGCCTCTGTGCAAGTATAAAGAAGTGGTAAGCCAATATCAATGTATTTaGGATCCAAGGGTGTACCAA +
Preference number: 4 (lower is better)
Translates to: VHTSLIELPLCKYKEVVSQYQCI*DPRVYQ
Trigger: TTGGTACACCCTTGGATCCCAAATACATTGATATTG...GCTTACCACTTCTTTATACTTGCACAGAGGCAGCTCTATGAGGGATGTGTGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414212.5
CDS-3UTR CCA 90 bp AGGTGTTGCGGTCTTTCCACTCCACTGGCACGTTACACTAACAGTGTTAATCTAAGTTATGGCACAAATTaGATCCCTTGTGCCTTGAAT +
Preference number: 4 (lower is better)
Translates to: RCCGLSTPLARYTNSVNLSYGTN*IPCALN
Trigger: ATTCAAGGCACAAGGGATCCAATTTGTGCCATAACT...TAGATTAACACTGTTAGTGTAACGTGCCAGTGGAGTGGAAAGACCGCAACACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CCA 90 bp AGAGTAGATCTCCACAGGAGGGATGATGTCTTCATAGTCTTTCAGGTGAAGAGCAGTTATGGCACAAATTaGATCCCTTGTGCCTTGAAT +
Preference number: 4 (lower is better)
Translates to: RVDLHRRDDVFIVFQVKSSYGTN*IPCALN
Trigger: ATTCAAGGCACAAGGGATCCAATTTGTGCCATAACT...GCTCTTCACCTGAAAGACTATGAAGACATCATCCCTCCTGTGGAGATCTACTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414212.5
CDS-3UTR CCA 90 bp AGGTGTTGCGGTCTTTCCACTCCACTGGCACGTTACACTAACAGTGTTAATCTAAATCAGGATTATCTTTaGCCCACTTCATATCCCAGA +
Preference number: 4 (lower is better)
Translates to: RCCGLSTPLARYTNSVNLNQDYL*PTSYPR
Trigger: TCTGGGATATGAAGTGGGCCAAAGATAATCCTGATT...TAGATTAACACTGTTAGTGTAACGTGCCAGTGGAGTGGAAAGACCGCAACACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CCA 90 bp TTTTATTTGGTTTATAAGGCTTTCTGTTCCATGACCTCTGGAATAGCTTGCGAGCCAAAGTCGGGGGTGTaGATTGTCCTCTATGAACTG +
Preference number: 4 (lower is better)
Translates to: FYLVYKAFCSMTSGIACEPKSGV*IVLYEL
Trigger: CAGTTCATAGAGGACAATCCACACCCCCGACTTTGG...CTCGCAAGCTATTCCAGAGGTCATGGAACAGAAAGCCTTATAAACCAAATAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CCA 90 bp TTCCTGAGCAAGGACACCGTGTTTGCATACACTGCACATCCAGAATTGATACTCTTTCTGGAAGTGAAATaGCAAGGTTCTCTAACCCTT +
Preference number: 4 (lower is better)
Translates to: FLSKDTVFAYTAHPELILFLEVK*QGSLTL
Trigger: AAGGGTTAGAGAACCTTGCCATTTCACTTCCAGAAA...GAGTATCAATTCTGGATGTGCAGTGTATGCAAACACGGTGTCCTTGCTCAGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR CCA 90 bp GTCCTGCAGGAACCTTTCAGACAGGCAGAACTAATAAGTGTGCCATCCCTACAATCTGGAAGTAACTTGTaGTTTTCTGGAAGTGAAATG +
Preference number: 4 (lower is better)
Translates to: VLQEPFRQAELISVPSLQSGSNL*FSGSEM
Trigger: CATTTCACTTCCAGAAAACCACAAGTTACTTCCAGA...TTGTAGGGATGGCACACTTATTAGTTCTGCCTGTCTGAAAGGTTCCTGCAGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CCA 90 bp ATGATGCTGTCTTCAATATACTACCTAATTCTGTTTATGCAACTTCTCACCAGGTGTGGCAACGCATGTTaGCAGTTTCCCTTCTCCACC +
Preference number: 4 (lower is better)
Translates to: MMLSSIYYLILFMQLLTRCGNAC*QFPFST
Trigger: GGTGGAGAAGGGAAACTGCCAACATGCGTTGCCACA...CCTGGTGAGAAGTTGCATAAACAGAATTAGGTAGTATATTGAAGACAGCATCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CCA 90 bp GTCCTGCAGGAACCTTTCAGACAGGCAGAACTAATAAGTGTGCCATCCCTACAAAGAGATACTGGTTTCTaGATCCAACTGAATGAGAAA +
Preference number: 4 (lower is better)
Translates to: VLQEPFRQAELISVPSLQRDTGF*IQLNEK
Trigger: TTTCTCATTCAGTTGGATCCAGAAACCAGTATCTCT...TTGTAGGGATGGCACACTTATTAGTTCTGCCTGTCTGAAAGGTTCCTGCAGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR TCA 90 bp CATCTAGGCTCTAAATCTCTTCTCATAGCTCACTATTCCCAATCTGCAACATGCCTGGTAGTCAACTTCTaGTACTGCTCATTCCATGTT +
Preference number: 4 (lower is better)
Translates to: HLGSKSLLIAHYSQSATCLVVNF*YCSFHV
Trigger: AACATGGAATGAGCAGTATCAGAAGTTGACTACCAG...GCATGTTGCAGATTGGGAATAGTGAGCTATGAGAAGAGATTTAGAGCCTAGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR TCA 90 bp AAGTCTGAGGAGTCAACAGGTGATTCTAGAACTAAAGCAAATGAAAGTGCAACCGTGCCATGGTACCAATaGATTCCAGCAATGCTGATA +
Preference number: 4 (lower is better)
Translates to: KSEESTGDSRTKANESATVPWYQ*IPAMLI
Trigger: TATCAGCATTGCTGGAATTCATTGGTACCATGGCAC...GGTTGCACTTTCATTTGCTTTAGTTCTAGAATCACCTGTTGACTCCTCAGACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR TCA 90 bp CATCTAGGCTCTAAATCTCTTCTCATAGCTCACTATTCCCAATCTGCAACATGCGAAAGTCAGAACTCCTaGGATGTCTATGATAGCAAG +
Preference number: 4 (lower is better)
Translates to: HLGSKSLLIAHYSQSATCESQNS*DVYDSK
Trigger: CTTGCTATCATAGACATCTCAGGAGTTCTGACTTTC...GCATGTTGCAGATTGGGAATAGTGAGCTATGAGAAGAGATTTAGAGCCTAGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR TCA 90 bp CTTGTTAGGCACACTGCTTATTTGTACAGCTTTATCAGTCAGTTCCATCATTTCATATATCCAGAGGTCTaGATGGGTTCCTCAGGATCC +
Preference number: 4 (lower is better)
Translates to: LVRHTAYLYSFISQFHHFIYPEV*MGSSGS
Trigger: GGATCCTGAGGAACCCATTCAGACCTCTGGATATAT...GAAATGATGGAACTGACTGATAAAGCTGTACAAATAAGCAGTGTGCCTAACAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR TCA 90 bp GCAGAAGTGGCCTCTGAACTTTTTCCTTTAACTTTTCCTCGCTGGGCATTCTTCTTGTCCTCTATGAACTaGGATGCATCTTTAATTCCA +
Preference number: 4 (lower is better)
Translates to: AEVASELFPLTFPRWAFFLSSMN*DASLIP
Trigger: TGGAATTAAAGATGCATCTCAGTTCATAGAGGACAA...GAAGAATGCCCAGCGAGGAAAAGTTAAAGGAAAAAGTTCAGAGGCCACTTCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR TCA 90 bp AGGTGTTGCGGTCTTTCCACTCCACTGGCACGTTACACTAACAGTGTTAATCTATTCTTTTCCAGTAAATaGGATGCATACCTAGCTAAC +
Preference number: 4 (lower is better)
Translates to: RCCGLSTPLARYTNSVNLFFSSK*DAYLAN
Trigger: GTTAGCTAGGTATGCATCTCATTTACTGGAAAAGAA...TAGATTAACACTGTTAGTGTAACGTGCCAGTGGAGTGGAAAGACCGCAACACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR TCA 90 bp AAGTCTGAGGAGTCAACAGGTGATTCTAGAACTAAAGCAAATGAAAGTGCAACCAGAATTAGGGGGAAATaGGAAGCCTCCAAAAGAGAG +
Preference number: 4 (lower is better)
Translates to: KSEESTGDSRTKANESATRIRGK*EASKRE
Trigger: CTCTCTTTTGGAGGCTTCTCATTTCCCCCTAATTCT...GGTTGCACTTTCATTTGCTTTAGTTCTAGAATCACCTGTTGACTCCTCAGACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR GCA 90 bp TTTTATTTGGTTTATAAGGCTTTCTGTTCCATGACCTCTGGAATAGCTTGCGAGAAGGCCCCTCAATTTTaGATCATCTGTCTGCGTCTC +
Preference number: 4 (lower is better)
Translates to: FYLVYKAFCSMTSGIACEKAPQF*IICLRL
Trigger: GAGACGCAGACAGATGATGCAAAATTGAGGGGCCTT...CTCGCAAGCTATTCCAGAGGTCATGGAACAGAAAGCCTTATAAACCAAATAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR GCA 90 bp GCAGAAGTGGCCTCTGAACTTTTTCCTTTAACTTTTCCTCGCTGGGCATTCTTCCATTCCAGCTCATACTaGGAACAACTGATTTATTTC +
Preference number: 4 (lower is better)
Translates to: AEVASELFPLTFPRWAFFHSSSY*EQLIYF
Trigger: GAAATAAATCAGTTGTTCGCAGTATGAGCTGGAATG...GAAGAATGCCCAGCGAGGAAAAGTTAAAGGAAAAAGTTCAGAGGCCACTTCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000414212.5
CDS-3UTR GCA 90 bp GCCCCTCTCCATGCATTATCTGTGAAACGATCTGTTGTAGACAGAACTTCTTCTCATCTTCATATACAATaGAGATCTTCTGTCCGTCAG +
Preference number: 4 (lower is better)
Translates to: APLHALSVKRSVVDRTSSHLHIQ*RSSVRQ
Trigger: CTGACGGACAGAAGATCTGCATTGTATATGAAGATG...AGAAGAAGTTCTGTCTACAACAGATCGTTTCACAGATAATGCATGGAGAGGGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414212.5
CDS-3UTR GCA 90 bp CATCTAGGCTCTAAATCTCTTCTCATAGCTCACTATTCCCAATCTGCAACATGCTTCCCCAAATACGATTaGCATCCACTGAACCAACTA +
Preference number: 4 (lower is better)
Translates to: HLGSKSLLIAHYSQSATCFPKYD*HPLNQL
Trigger: TAGTTGGTTCAGTGGATGGCAATCGTATTTGGGGAA...GCATGTTGCAGATTGGGAATAGTGAGCTATGAGAAGAGATTTAGAGCCTAGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR GCA 90 bp GATTCACGACCCACAATCAATATCTTATCTGATGCAGTTATGGCACAAATTGGACCACGTAGCCTTCTGTaGCATGGTACCAATGAATTC +
Preference number: 4 (lower is better)
Translates to: DSRPTINILSDAVMAQIGPRSLL*HGTNEF
Trigger: GAATTCATTGGTACCATGGCACAGAAGGCTACGTGG...TCCAATTTGTGCCATAACTGCATCAGATAAGATATTGATTGTGGGTCGTGAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445063.5
CDS-3UTR GCA 90 bp TTTCTGATTTGGGGAAATTTCCCATTCTGGTATAGAACAAATGAGAAAGCTGGATGTGGTTCCACTGGATaGCTACTACGTACATGCCAG +
Preference number: 4 (lower is better)
Translates to: FLIWGNFPFWYRTNEKAGCGSTG*LLRTCQ
Trigger: CTGGCATGTACGTAGTAGGCATCCAGTGGAACCACA...TCCAGCTTTCTCATTTGTTCTATACCAGAATGGGAAATTTCCCCAAATCAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR GCA 90 bp GTCCTGCAGGAACCTTTCAGACAGGCAGAACTAATAAGTGTGCCATCCCTACAAATGGGTTTTGGTCATTaGAACAAACAATGGTACAAT +
Preference number: 4 (lower is better)
Translates to: VLQEPFRQAELISVPSLQMGFGH*NKQWYN
Trigger: ATTGTACCATTGTTTGTTGCAATGACCAAAACCCAT...TTGTAGGGATGGCACACTTATTAGTTCTGCCTGTCTGAAAGGTTCCTGCAGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR GCA 90 bp CAGTGCAGTGTCCACACATCCCTCATAGAGCTGCCTCTGTGCAAGTATAAAGAAATGGGTTTTGGTCATTaGAACAAACAATGGTACAAT +
Preference number: 4 (lower is better)
Translates to: QCSVHTSLIELPLCKYKEMGFGH*NKQWYN
Trigger: ATTGTACCATTGTTTGTTGCAATGACCAAAACCCAT...TTCTTTATACTTGCACAGAGGCAGCTCTATGAGGGATGTGTGGACACTGCACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414212.5
CDS-3UTR GCA 90 bp TTTTATTTGGTTTATAAGGCTTTCTGTTCCATGACCTCTGGAATAGCTTGCGAGTGCTGTGAGCTTCTTTaGCACACGATATTGCCAGGT +
Preference number: 4 (lower is better)
Translates to: FYLVYKAFCSMTSGIACECCELL*HTILPG
Trigger: ACCTGGCAATATCGTGTGGCAAAGAAGCTCACAGCA...CTCGCAAGCTATTCCAGAGGTCATGGAACAGAAAGCCTTATAAACCAAATAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR GCA 90 bp GCCCCTCTCCATGCATTATCTGTGAAACGATCTGTTGTAGACAGAACTTCTTCTCTGATTAATTTCCAATaGTGTGAGCTTCTTTGCCAC +
Preference number: 4 (lower is better)
Translates to: APLHALSVKRSVVDRTSSLINFQ*CELLCH
Trigger: GTGGCAAAGAAGCTCACAGCATTGGAAATTAATCAG...AGAAGAAGTTCTGTCTACAACAGATCGTTTCACAGATAATGCATGGAGAGGGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR GCA 90 bp AGCCTCTGCCCCTCTCCATGCATTATCTGTGAAACGATCTGTTGTAGACAGAACAAATTGGATCCCTTGTaGCTTGAATGGTTTTACTAT +
Preference number: 4 (lower is better)
Translates to: SLCPSPCIICETICCRQNKLDPL*LEWFYY
Trigger: ATAGTAAAACCATTCAAGGCACAAGGGATCCAATTT...GTTCTGTCTACAACAGATCGTTTCACAGATAATGCATGGAGAGGGGCAGAGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR GCA 90 bp CTTGTTAGGCACACTGCTTATTTGTACAGCTTTATCAGTCAGTTCCATCATTTCAACCTTCTCAATCAGTaGTCGGCTATCTCGCAGAGA +
Preference number: 4 (lower is better)
Translates to: LVRHTAYLYSFISQFHHFNLLNQ*SAISQR
Trigger: TCTCTGCGAGATAGCCGAGCACTGATTGAGAAGGTT...GAAATGATGGAACTGACTGATAAAGCTGTACAAATAAGCAGTGTGCCTAACAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR GCA 90 bp AGCCTCTGCCCCTCTCCATGCATTATCTGTGAAACGATCTGTTGTAGACAGAACCTCTATGAACTGAGATaGATCTTTAATTCCAACCTT +
Preference number: 4 (lower is better)
Translates to: SLCPSPCIICETICCRQNLYELR*IFNSNL
Trigger: AAGGTTGGAATTAAAGATGCATCTCAGTTCATAGAG...GTTCTGTCTACAACAGATCGTTTCACAGATAATGCATGGAGAGGGGCAGAGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR GCA 90 bp AAGTCTGAGGAGTCAACAGGTGATTCTAGAACTAAAGCAAATGAAAGTGCAACCTGCCTTGGTAATCTTTaGAGCGCACAAATGCTTGCT +
Preference number: 4 (lower is better)
Translates to: KSEESTGDSRTKANESATCLGNL*SAQMLA
Trigger: AGCAAGCATTTGTGCGCTGCAAAGATTACCAAGGCA...GGTTGCACTTTCATTTGCTTTAGTTCTAGAATCACCTGTTGACTCCTCAGACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR GCA 90 bp CTTGTTAGGCACACTGCTTATTTGTACAGCTTTATCAGTCAGTTCCATCATTTCCAGCCTCTTCAAACCTaGCGAAGTAGCCAACAACTT +
Preference number: 4 (lower is better)
Translates to: LVRHTAYLYSFISQFHHFQPLQT*RSSQQL
Trigger: AAGTTGTTGGCTACTTCGGCAGGTTTGAAGAGGCTG...GAAATGATGGAACTGACTGATAAAGCTGTACAAATAAGCAGTGTGCCTAACAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR GCA 90 bp AAGTCTGAGGAGTCAACAGGTGATTCTAGAACTAAAGCAAATGAAAGTGCAACCCAGGAGACTGTCATCTaGATCACCAGATCCAGTTTT +
Preference number: 4 (lower is better)
Translates to: KSEESTGDSRTKANESATQETVI*ITRSSF
Trigger: AAAACTGGATCTGGTGATGCAGATGACAGTCTCCTG...GGTTGCACTTTCATTTGCTTTAGTTCTAGAATCACCTGTTGACTCCTCAGACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR GCA 90 bp GTCCTGCAGGAACCTTTCAGACAGGCAGAACTAATAAGTGTGCCATCCCTACAAACTACATTTCAAAAATaGAGTCACTGCTTGTTCACA +
Preference number: 4 (lower is better)
Translates to: VLQEPFRQAELISVPSLQTTFQK*SHCLFT
Trigger: TGTGAACAAGCAGTGACTGCATTTTTGAAATGTAGT...TTGTAGGGATGGCACACTTATTAGTTCTGCCTGTCTGAAAGGTTCCTGCAGGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR GCA 90 bp CCTGAGCAAGGACACCGTGTTTGCATACACTGCACATCCAGAATTGATACTCAGACTACATTTCAAAAATaGAGTCACTGCTTGTTCACA +
Preference number: 4 (lower is better)
Translates to: PEQGHRVCIHCTSRIDTQTTFQK*SHCLFT
Trigger: TGTGAACAAGCAGTGACTGCATTTTTGAAATGTAGT...CTGAGTATCAATTCTGGATGTGCAGTGTATGCAAACACGGTGTCCTTGCTCAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414212.5
CDS-3UTR GCA 90 bp AACAGCTTTGTTCCATTGGTTGAGATGTACGCAGGTATCTACTGCTGCCTTTGGATCTGTTCATGGTATTaGTCTATAAGTAAGGCTGAC +
Preference number: 4 (lower is better)
Translates to: NSFVPLVEMYAGIYCCLWICSWY*SISKAD
Trigger: GTCAGCCTTACTTATAGAGCAATACCATGAACAGAT...CCAAAGGCAGCAGTAGATACCTGCGTACATCTCAACCAATGGAACAAAGCTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414212.5
CDS-3UTR GCA 90 bp TTTTATTTGGTTTATAAGGCTTTCTGTTCCATGACCTCTGGAATAGCTTGCGAGCTCTGCCCCTCTCCATaGATTATCTGTGAAACGATC +
Preference number: 4 (lower is better)
Translates to: FYLVYKAFCSMTSGIACELCPSP*IICETI
Trigger: GATCGTTTCACAGATAATGCATGGAGAGGGGCAGAG...CTCGCAAGCTATTCCAGAGGTCATGGAACAGAAAGCCTTATAAACCAAATAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR GCA 90 bp ATGATGCTGTCTTCAATATACTACCTAATTCTGTTTATGCAACTTCTCACCAGGGAAGTGGTAAGCCTCTaGCCCTCTCCATGCATTATC +
Preference number: 4 (lower is better)
Translates to: MMLSSIYYLILFMQLLTREVVSL*PSPCII
Trigger: GATAATGCATGGAGAGGGGCAGAGGCTTACCACTTC...CCTGGTGAGAAGTTGCATAAACAGAATTAGGTAGTATATTGAAGACAGCATCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR GCA 90 bp AGGAGTCAACAGGTGATTCTAGAACTAAAGCAAATGAAAGTGCAACCAACAAATAAGAGCTGTCTTCAGTaGAGTGTCCACACATCCCTC +
Preference number: 4 (lower is better)
Translates to: RSQQVILELKQMKVQPTNKSCLQ*SVHTSL
Trigger: GAGGGATGTGTGGACACTGCACTGAAGACAGCTCTT...ATTTGTTGGTTGCACTTTCATTTGCTTTAGTTCTAGAATCACCTGTTGACTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR GCA 90 bp TATAAAGAAGTGGTAAGCCTCTGCCCCTCTCCATGCATTATCTGTGAAACGATCCGTGTTTGCATACACTaGACATCCAGAATTGATACT +
Preference number: 4 (lower is better)
Translates to: YKEVVSLCPSPCIICETIRVCIH*TSRIDT
Trigger: AGTATCAATTCTGGATGTGCAGTGTATGCAAACACG...GATCGTTTCACAGATAATGCATGGAGAGGGGCAGAGGCTTACCACTTCTTTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR GCA 90 bp GTCCACACATCCCTCATAGAGCTGCCTCTGTGCAAGTATAAAGAAGTGGTAAGCTCTGACAAACATTTGTaGTATTTCCTACTGGAAGTA +
Preference number: 4 (lower is better)
Translates to: VHTSLIELPLCKYKEVVSSDKHL*YFLLEV
Trigger: TACTTCCAGTAGGAAATAGCACAAATGTTTGTCAGA...GCTTACCACTTCTTTATACTTGCACAGAGGCAGCTCTATGAGGGATGTGTGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414212.5
CDS-3UTR GCA 90 bp GCCCCTCTCCATGCATTATCTGTGAAACGATCTGTTGTAGACAGAACTTCTTCTCTTTGCCTCTTCATCTaGAATCTAGCTAACAGAGAT +
Preference number: 4 (lower is better)
Translates to: APLHALSVKRSVVDRTSSLCLFI*NLANRD
Trigger: ATCTCTGTTAGCTAGATTGCAGATGAAGAGGCAAAG...AGAAGAAGTTCTGTCTACAACAGATCGTTTCACAGATAATGCATGGAGAGGGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414212.5
CDS-3UTR CCA 90 bp CCTGAGCAAGGACACCGTGTTTGCATACACTGCACATCCAGAATTGATACTCAGATCAAAACGGGATTTTaGTCATTCTCATGTCTCATT +
Preference number: 4 (lower is better)
Translates to: PEQGHRVCIHCTSRIDTQIKTGF*SFSCLI
Trigger: AATGAGACATGAGAATGACCAAAATCCCGTTTTGAT...CTGAGTATCAATTCTGGATGTGCAGTGTATGCAAACACGGTGTCCTTGCTCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR CCA 90 bp AGGCCAATAGCAAGATCCCTTCTGTCCATCTCGAGATACGTTCTTTCAGCCTCTATCAAAACGGGATTTTaGTCATTCTCATGTCTCATT +
Preference number: 4 (lower is better)
Translates to: RPIARSLLSISRYVLSASIKTGF*SFSCLI
Trigger: AATGAGACATGAGAATGACCAAAATCCCGTTTTGAT...AGAGGCTGAAAGAACGTATCTCGAGATGGACAGAAGGGATCTTGCTATTGGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445063.5
CDS-3UTR CCA 90 bp GTCATCTGCATCACCAGATCCAGTTTTCAGGAGCTGGAGTACTCTAAACCAATCCTATCACATGGGTTTTaGTCATTGCAACAAACAATG +
Preference number: 4 (lower is better)
Translates to: VICITRSSFQELEYSKPILSHGF*SLQQTM
Trigger: CATTGTTTGTTGCAATGACCAAAACCCATGTGATAG...GATTGGTTTAGAGTACTCCAGCTCCTGAAAACTGGATCTGGTGATGCAGATGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445063.5
CDS-3UTR CCA 90 bp AACAGCTTTGTTCCATTGGTTGAGATGTACGCAGGTATCTACTGCTGCCTTTGGCCCTTGTGCCTTGAATaGTTTTACTATAATCAAGCA +
Preference number: 4 (lower is better)
Translates to: NSFVPLVEMYAGIYCCLWPLCLE*FYYNQA
Trigger: TGCTTGATTATAGTAAAACCATTCAAGGCACAAGGG...CCAAAGGCAGCAGTAGATACCTGCGTACATCTCAACCAATGGAACAAAGCTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414212.5
CDS-3UTR CCA 90 bp AAGTCTGAGGAGTCAACAGGTGATTCTAGAACTAAAGCAAATGAAAGTGCAACCCCAGTTTTCAGGAGCTaGAGTACTCTAAACCAATCC +
Preference number: 4 (lower is better)
Translates to: KSEESTGDSRTKANESATPVFRS*STLNQS
Trigger: GGATTGGTTTAGAGTACTCCAGCTCCTGAAAACTGG...GGTTGCACTTTCATTTGCTTTAGTTCTAGAATCACCTGTTGACTCCTCAGACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CCA 90 bp AGGTGTTGCGGTCTTTCCACTCCACTGGCACGTTACACTAACAGTGTTAATCTATCTGGAAGTAACTTGTaGTTTTCTGGAAGTGAAATG +
Preference number: 4 (lower is better)
Translates to: RCCGLSTPLARYTNSVNLSGSNL*FSGSEM
Trigger: CATTTCACTTCCAGAAAACCACAAGTTACTTCCAGA...TAGATTAACACTGTTAGTGTAACGTGCCAGTGGAGTGGAAAGACCGCAACACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CCA 90 bp CTTGTTAGGCACACTGCTTATTTGTACAGCTTTATCAGTCAGTTCCATCATTTCCAGCCAAGGCAGAAGTaGCCTCTGAACTTTTTCCTT +
Preference number: 4 (lower is better)
Translates to: LVRHTAYLYSFISQFHHFQPRQK*PLNFFL
Trigger: AAGGAAAAAGTTCAGAGGCCACTTCTGCCTTGGCTG...GAAATGATGGAACTGACTGATAAAGCTGTACAAATAAGCAGTGTGCCTAACAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CCA 90 bp AATATTGTACAGCATTCAACCACTTTTGTCGATCAGCAAAGTAGTCTCCAATGGCAGCCAAGGCAGAAGTaGCCTCTGAACTTTTTCCTT +
Preference number: 4 (lower is better)
Translates to: NIVQHSTTFVDQQSSLQWQPRQK*PLNFFL
Trigger: AAGGAAAAAGTTCAGAGGCCACTTCTGCCTTGGCTG...CCATTGGAGACTACTTTGCTGATCGACAAAAGTGGTTGAATGCTGTACAATATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445063.5
CDS-3UTR CCA 90 bp CTTGTTAGGCACACTGCTTATTTGTACAGCTTTATCAGTCAGTTCCATCATTTCTTGATACTCAGTGATTaGGCTTCCTGTGGCAACGCA +
Preference number: 4 (lower is better)
Translates to: LVRHTAYLYSFISQFHHFLILSD*ASCGNA
Trigger: TGCGTTGCCACAGGAAGCCCAATCACTGAGTATCAA...GAAATGATGGAACTGACTGATAAAGCTGTACAAATAAGCAGTGTGCCTAACAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CCA 90 bp TTTCTGATTTGGGGAAATTTCCCATTCTGGTATAGAACAAATGAGAAAGCTGGATATCCCACTGGACTATaGCATAAGGGGCAGAAGCTG +
Preference number: 4 (lower is better)
Translates to: FLIWGNFPFWYRTNEKAGYPTGL*HKGQKL
Trigger: CAGCTTCTGCCCCTTATGCCATAGTCCAGTGGGATA...TCCAGCTTTCTCATTTGTTCTATACCAGAATGGGAAATTTCCCCAAATCAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CCA 90 bp GTAAGCCTCTGCCCCTCTCCATGCATTATCTGTGAAACGATCTGTTGTAGACAGATTGGAAGTAACTTGTaGTTTTCTGGAAGTGAAATG +
Preference number: 4 (lower is better)
Translates to: VSLCPSPCIICETICCRQIGSNL*FSGSEM
Trigger: CATTTCACTTCCAGAAAACCACAAGTTACTTCCAAT...CTGTCTACAACAGATCGTTTCACAGATAATGCATGGAGAGGGGCAGAGGCTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445063.5
CDS-3UTR TCA 90 bp ATGATGCTGTCTTCAATATACTACCTAATTCTGTTTATGCAACTTCTCACCAGGAAGCACACCATCCATTaGTCCAGAAGGGGTATCATC +
Preference number: 4 (lower is better)
Translates to: MMLSSIYYLILFMQLLTRKHTIH*SRRGII
Trigger: GATGATACCCCTTCTGGATCAATGGATGGTGTGCTT...CCTGGTGAGAAGTTGCATAAACAGAATTAGGTAGTATATTGAAGACAGCATCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR TCA 90 bp AGGAGTCAACAGGTGATTCTAGAACTAAAGCAAATGAAAGTGCAACCAACAAATGGTAGACTGTATCTCTaGATGGTGCCAGATTCACGA +
Preference number: 4 (lower is better)
Translates to: RSQQVILELKQMKVQPTNGRLYL*MVPDSR
Trigger: TCGTGAATCTGGCACCATTCAGAGATACAGTCTACC...ATTTGTTGGTTGCACTTTCATTTGCTTTAGTTCTAGAATCACCTGTTGACTCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR TCA 90 bp AGGAGTCAACAGGTGATTCTAGAACTAAAGCAAATGAAAGTGCAACCAACAAATATATATCCAGAGGTCTaGATGGGTTCCTCAGGATCC +
Preference number: 4 (lower is better)
Translates to: RSQQVILELKQMKVQPTNIYPEV*MGSSGS
Trigger: GGATCCTGAGGAACCCATTCAGACCTCTGGATATAT...ATTTGTTGGTTGCACTTTCATTTGCTTTAGTTCTAGAATCACCTGTTGACTCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR TCA 90 bp TATAAAGAAGTGGTAAGCCTCTGCCCCTCTCCATGCATTATCTGTGAAACGATCTTGTCCTCTATGAACTaGGATGCATCTTTAATTCCA +
Preference number: 4 (lower is better)
Translates to: YKEVVSLCPSPCIICETILSSMN*DASLIP
Trigger: TGGAATTAAAGATGCATCTCAGTTCATAGAGGACAA...GATCGTTTCACAGATAATGCATGGAGAGGGGCAGAGGCTTACCACTTCTTTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR TCA 90 bp CTTGTTAGGCACACTGCTTATTTGTACAGCTTTATCAGTCAGTTCCATCATTTCTCTCCACAGGAGGGATaGTGTCTTCATAGTCTTTCA +
Preference number: 4 (lower is better)
Translates to: LVRHTAYLYSFISQFHHFSPQEG*CLHSLS
Trigger: TGAAAGACTATGAAGACATCATCCCTCCTGTGGAGA...GAAATGATGGAACTGACTGATAAAGCTGTACAAATAAGCAGTGTGCCTAACAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR TCA 90 bp CATCTAGGCTCTAAATCTCTTCTCATAGCTCACTATTCCCAATCTGCAACATGCACAAAAGAGAGAGGGTaGGAGAAAACATGGTTGATT +
Preference number: 4 (lower is better)
Translates to: HLGSKSLLIAHYSQSATCTKERG*EKTWLI
Trigger: AATCAACCATGTTTTCTCTCACCCTCTCTCTTTTGT...GCATGTTGCAGATTGGGAATAGTGAGCTATGAGAAGAGATTTAGAGCCTAGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR TCA 90 bp CTTGTTAGGCACACTGCTTATTTGTACAGCTTTATCAGTCAGTTCCATCATTTCGTTTCCAAAGTTAGGTaGAGTCTGAGGAGTCAACAG +
Preference number: 4 (lower is better)
Translates to: LVRHTAYLYSFISQFHHFVSKVR*SLRSQQ
Trigger: CTGTTGACTCCTCAGACTTCACCTAACTTTGGAAAC...GAAATGATGGAACTGACTGATAAAGCTGTACAAATAAGCAGTGTGCCTAACAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR GCA 90 bp TTTTATTTGGTTTATAAGGCTTTCTGTTCCATGACCTCTGGAATAGCTTGCGAGATCTTCACCACCGCATaGTATGAACCCTTGTTCCTT +
Preference number: 4 (lower is better)
Translates to: FYLVYKAFCSMTSGIACEIFTTA*YEPLFL
Trigger: AAGGAACAAGGGTTCATAGCATGCGGTGGTGAAGAT...CTCGCAAGCTATTCCAGAGGTCATGGAACAGAAAGCCTTATAAACCAAATAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR GCA 90 bp AGGAGTCAACAGGTGATTCTAGAACTAAAGCAAATGAAAGTGCAACCAACAAATAAGGCCCCTCAATTTTaGATCATCTGTCTGCGTCTC +
Preference number: 4 (lower is better)
Translates to: RSQQVILELKQMKVQPTNKAPQF*IICLRL
Trigger: GAGACGCAGACAGATGATGCAAAATTGAGGGGCCTT...ATTTGTTGGTTGCACTTTCATTTGCTTTAGTTCTAGAATCACCTGTTGACTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR GCA 90 bp CATCTAGGCTCTAAATCTCTTCTCATAGCTCACTATTCCCAATCTGCAACATGCCATCTTCATATACAATaGAGATCTTCTGTCCGTCAG +
Preference number: 4 (lower is better)
Translates to: HLGSKSLLIAHYSQSATCHLHIQ*RSSVRQ
Trigger: CTGACGGACAGAAGATCTGCATTGTATATGAAGATG...GCATGTTGCAGATTGGGAATAGTGAGCTATGAGAAGAGATTTAGAGCCTAGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR GCA 90 bp AGGAGTCAACAGGTGATTCTAGAACTAAAGCAAATGAAAGTGCAACCAACAAATCCACGTAGCCTTCTGTaGCATGGTACCAATGAATTC +
Preference number: 4 (lower is better)
Translates to: RSQQVILELKQMKVQPTNPRSLL*HGTNEF
Trigger: GAATTCATTGGTACCATGGCACAGAAGGCTACGTGG...ATTTGTTGGTTGCACTTTCATTTGCTTTAGTTCTAGAATCACCTGTTGACTCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR GCA 90 bp TTTTATTTGGTTTATAAGGCTTTCTGTTCCATGACCTCTGGAATAGCTTGCGAGTGCCTACTACGTACATaGCAGTGTCAATCAAAACGG +
Preference number: 4 (lower is better)
Translates to: FYLVYKAFCSMTSGIACECLLRT*QCQSKR
Trigger: CCGTTTTGATTGACACTGGCATGTACGTAGTAGGCA...CTCGCAAGCTATTCCAGAGGTCATGGAACAGAAAGCCTTATAAACCAAATAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR GCA 90 bp AGGAGTCAACAGGTGATTCTAGAACTAAAGCAAATGAAAGTGCAACCAACAAATTTCACATCTTTGTCCTaGATGGCTGCCTTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: RSQQVILELKQMKVQPTNFTSLS*MAAFWK
Trigger: CTTCCAGAAGGCAGCCATGCAGGACAAAGATGTGAA...ATTTGTTGGTTGCACTTTCATTTGCTTTAGTTCTAGAATCACCTGTTGACTCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR GCA 90 bp CATCTAGGCTCTAAATCTCTTCTCATAGCTCACTATTCCCAATCTGCAACATGCCTGATTAATTTCCAATaGTGTGAGCTTCTTTGCCAC +
Preference number: 4 (lower is better)
Translates to: HLGSKSLLIAHYSQSATCLINFQ*CELLCH
Trigger: GTGGCAAAGAAGCTCACAGCATTGGAAATTAATCAG...GCATGTTGCAGATTGGGAATAGTGAGCTATGAGAAGAGATTTAGAGCCTAGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR GCA 90 bp AGGTGTTGCGGTCTTTCCACTCCACTGGCACGTTACACTAACAGTGTTAATCTATGTCTTCTCCATCATTaGAAACAAATCAGGATTATC +
Preference number: 4 (lower is better)
Translates to: RCCGLSTPLARYTNSVNLCLLHH*KQIRII
Trigger: GATAATCCTGATTTGTTTGCAATGATGGAGAAGACA...TAGATTAACACTGTTAGTGTAACGTGCCAGTGGAGTGGAAAGACCGCAACACCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR GCA 90 bp ATGATGCTGTCTTCAATATACTACCTAATTCTGTTTATGCAACTTCTCACCAGGCAGCGCACAAATGCTTaGTCTGCAGTGTATAGATCC +
Preference number: 4 (lower is better)
Translates to: MMLSSIYYLILFMQLLTRQRTNA*SAVYRS
Trigger: GGATCTATACACTGCAGAGCAAGCATTTGTGCGCTG...CCTGGTGAGAAGTTGCATAAACAGAATTAGGTAGTATATTGAAGACAGCATCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR GCA 90 bp TTTTATTTGGTTTATAAGGCTTTCTGTTCCATGACCTCTGGAATAGCTTGCGAGTGCCTTGGTAATCTTTaGAGCGCACAAATGCTTGCT +
Preference number: 4 (lower is better)
Translates to: FYLVYKAFCSMTSGIACECLGNL*SAQMLA
Trigger: AGCAAGCATTTGTGCGCTGCAAAGATTACCAAGGCA...CTCGCAAGCTATTCCAGAGGTCATGGAACAGAAAGCCTTATAAACCAAATAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR GCA 90 bp ATGATGCTGTCTTCAATATACTACCTAATTCTGTTTATGCAACTTCTCACCAGGCAGCCTCTTCAAACCTaGCGAAGTAGCCAACAACTT +
Preference number: 4 (lower is better)
Translates to: MMLSSIYYLILFMQLLTRQPLQT*RSSQQL
Trigger: AAGTTGTTGGCTACTTCGGCAGGTTTGAAGAGGCTG...CCTGGTGAGAAGTTGCATAAACAGAATTAGGTAGTATATTGAAGACAGCATCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR GCA 90 bp CATCTAGGCTCTAAATCTCTTCTCATAGCTCACTATTCCCAATCTGCAACATGCCAAAAATGCAGTCACTaGTTGTTCACACATTCCAAC +
Preference number: 4 (lower is better)
Translates to: HLGSKSLLIAHYSQSATCQKCSH*LFTHSN
Trigger: GTTGGAATGTGTGAACAAGCAGTGACTGCATTTTTG...GCATGTTGCAGATTGGGAATAGTGAGCTATGAGAAGAGATTTAGAGCCTAGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR GCA 90 bp CTTGTTAGGCACACTGCTTATTTGTACAGCTTTATCAGTCAGTTCCATCATTTCTACGCAGGTATCTACTaGTGCCTTTGGTTGACTACA +
Preference number: 4 (lower is better)
Translates to: LVRHTAYLYSFISQFHHFYAGIY*CLWLTT
Trigger: TGTAGTCAACCAAAGGCAGCAGTAGATACCTGCGTA...GAAATGATGGAACTGACTGATAAAGCTGTACAAATAAGCAGTGTGCCTAACAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR GCA 90 bp AGGTGTTGCGGTCTTTCCACTCCACTGGCACGTTACACTAACAGTGTTAATCTATTTACTTCCTTTCTTTaGCTCTTCATCTGCAATCTT +
Preference number: 4 (lower is better)
Translates to: RCCGLSTPLARYTNSVNLFTSFL*LFICNL
Trigger: AAGATTGCAGATGAAGAGGCAAAGAAAGGAAGTAAA...TAGATTAACACTGTTAGTGTAACGTGCCAGTGGAGTGGAAAGACCGCAACACCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR GCA 90 bp TTCCTGAGCAAGGACACCGTGTTTGCATACACTGCACATCCAGAATTGATACTCTTTACTTCCTTTCTTTaGCTCTTCATCTGCAATCTA +
Preference number: 4 (lower is better)
Translates to: FLSKDTVFAYTAHPELILFTSFL*LFICNL
Trigger: TAGATTGCAGATGAAGAGGCAAAGAAAGGAAGTAAA...GAGTATCAATTCTGGATGTGCAGTGTATGCAAACACGGTGTCCTTGCTCAGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414212.5
CDS-3UTR CCA 90 bp TATAAAGAAGTGGTAAGCCTCTGCCCCTCTCCATGCATTATCTGTGAAACGATCTCACGTTATTGGGAATaGAAATTTTCTTGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: YKEVVSLCPSPCIICETISRYWE*KFSCSG
Trigger: ACCTGAGCAAGAAAATTTCCATTCCCAATAACGTGA...GATCGTTTCACAGATAATGCATGGAGAGGGGCAGAGGCTTACCACTTCTTTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414212.5
CDS-3UTR CCA 90 bp TTTTATTTGGTTTATAAGGCTTTCTGTTCCATGACCTCTGGAATAGCTTGCGAGGCAGACCATGTTACATaGGATAGCTGTATACCCTTC +
Preference number: 4 (lower is better)
Translates to: FYLVYKAFCSMTSGIACEADHVT*DSCIPF
Trigger: GAAGGGTATACAGCTATCCCATGTAACATGGTCTGC...CTCGCAAGCTATTCCAGAGGTCATGGAACAGAAAGCCTTATAAACCAAATAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CCA 90 bp CTTGTTAGGCACACTGCTTATTTGTACAGCTTTATCAGTCAGTTCCATCATTTCGCAGACCATGTTACATaGGATAGCTGTATACCCTTC +
Preference number: 4 (lower is better)
Translates to: LVRHTAYLYSFISQFHHFADHVT*DSCIPF
Trigger: GAAGGGTATACAGCTATCCCATGTAACATGGTCTGC...GAAATGATGGAACTGACTGATAAAGCTGTACAAATAAGCAGTGTGCCTAACAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CCA 90 bp TTTTATTTGGTTTATAAGGCTTTCTGTTCCATGACCTCTGGAATAGCTTGCGAGGAGGCTGCTATCACATaGGTTTTGGTCATTGCAACA +
Preference number: 4 (lower is better)
Translates to: FYLVYKAFCSMTSGIACEEAAIT*VLVIAT
Trigger: TGTTGCAATGACCAAAACCCATGTGATAGCAGCCTC...CTCGCAAGCTATTCCAGAGGTCATGGAACAGAAAGCCTTATAAACCAAATAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CCA 90 bp TTTCTGATTTGGGGAAATTTCCCATTCTGGTATAGAACAAATGAGAAAGCTGGAGACTGTATCTCTGAATaGTGCCAGATTCACGACCCA +
Preference number: 4 (lower is better)
Translates to: FLIWGNFPFWYRTNEKAGDCISE*CQIHDP
Trigger: TGGGTCGTGAATCTGGCACCATTCAGAGATACAGTC...TCCAGCTTTCTCATTTGTTCTATACCAGAATGGGAAATTTCCCCAAATCAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CCA 90 bp CATCTAGGCTCTAAATCTCTTCTCATAGCTCACTATTCCCAATCTGCAACATGCTTTCTGGAAGTGAAATaGCAAGGTTCTCTAACCCTT +
Preference number: 4 (lower is better)
Translates to: HLGSKSLLIAHYSQSATCFLEVK*QGSLTL
Trigger: AAGGGTTAGAGAACCTTGCCATTTCACTTCCAGAAA...GCATGTTGCAGATTGGGAATAGTGAGCTATGAGAAGAGATTTAGAGCCTAGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CCA 90 bp AACAGCTTTGTTCCATTGGTTGAGATGTACGCAGGTATCTACTGCTGCCTTTGGATCTACTGCTGCCTTTaGTTGACTACATTTCAAAAA +
Preference number: 4 (lower is better)
Translates to: NSFVPLVEMYAGIYCCLWIYCCL*LTTFQK
Trigger: TTTTTGAAATGTAGTCAACCAAAGGCAGCAGTAGAT...CCAAAGGCAGCAGTAGATACCTGCGTACATCTCAACCAATGGAACAAAGCTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414212.5
CDS-3UTR CCA 90 bp AGGAGTCAACAGGTGATTCTAGAACTAAAGCAAATGAAAGTGCAACCAACAAATCAGCCAAGGCAGAAGTaGCCTCTGAACTTTTTCCTT +
Preference number: 4 (lower is better)
Translates to: RSQQVILELKQMKVQPTNQPRQK*PLNFFL
Trigger: AAGGAAAAAGTTCAGAGGCCACTTCTGCCTTGGCTG...ATTTGTTGGTTGCACTTTCATTTGCTTTAGTTCTAGAATCACCTGTTGACTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CCA 90 bp AGGAGTCAACAGGTGATTCTAGAACTAAAGCAAATGAAAGTGCAACCAACAAATTTGATACTCAGTGATTaGGCTTCCTGTGGCAACGCA +
Preference number: 4 (lower is better)
Translates to: RSQQVILELKQMKVQPTNLILSD*ASCGNA
Trigger: TGCGTTGCCACAGGAAGCCCAATCACTGAGTATCAA...ATTTGTTGGTTGCACTTTCATTTGCTTTAGTTCTAGAATCACCTGTTGACTCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR TCA 90 bp TTTCTGATTTGGGGAAATTTCCCATTCTGGTATAGAACAAATGAGAAAGCTGGAGTGCCATGGTACCAATaGATTCCAGCAATGCTGATA +
Preference number: 4 (lower is better)
Translates to: FLIWGNFPFWYRTNEKAGVPWYQ*IPAMLI
Trigger: TATCAGCATTGCTGGAATTCATTGGTACCATGGCAC...TCCAGCTTTCTCATTTGTTCTATACCAGAATGGGAAATTTCCCCAAATCAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR TCA 90 bp AGGAGTCAACAGGTGATTCTAGAACTAAAGCAAATGAAAGTGCAACCAACAAATCGAGACCGTGTGATCTaGTTAATTTCCAATGCTGTG +
Preference number: 4 (lower is better)
Translates to: RSQQVILELKQMKVQPTNRDRVI*LISNAV
Trigger: CACAGCATTGGAAATTAATCAGATCACACGGTCTCG...ATTTGTTGGTTGCACTTTCATTTGCTTTAGTTCTAGAATCACCTGTTGACTCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR TCA 90 bp CATCTAGGCTCTAAATCTCTTCTCATAGCTCACTATTCCCAATCTGCAACATGCCAGGATCCAAGTTTCTaGAAACATACATTCTTGTCT +
Preference number: 4 (lower is better)
Translates to: HLGSKSLLIAHYSQSATCQDPSF*KHTFLS
Trigger: AGACAAGAATGTATGTTTTCAGAAACTTGGATCCTG...GCATGTTGCAGATTGGGAATAGTGAGCTATGAGAAGAGATTTAGAGCCTAGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR TCA 90 bp ATGATGCTGTCTTCAATATACTACCTAATTCTGTTTATGCAACTTCTCACCAGGTATAGATCCAGTTTCTaGAGAGCTGCTTCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: MMLSSIYYLILFMQLLTRYRSSF*RAASAS
Trigger: ACTGGCTGAAGCAGCTCTTCAGAAACTGGATCTATA...CCTGGTGAGAAGTTGCATAAACAGAATTAGGTAGTATATTGAAGACAGCATCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR TCA 90 bp CATCTAGGCTCTAAATCTCTTCTCATAGCTCACTATTCCCAATCTGCAACATGCTTCTTTTCCAGTAAATaGGATGCATACCTAGCTAAC +
Preference number: 4 (lower is better)
Translates to: HLGSKSLLIAHYSQSATCFFSSK*DAYLAN
Trigger: GTTAGCTAGGTATGCATCTCATTTACTGGAAAAGAA...GCATGTTGCAGATTGGGAATAGTGAGCTATGAGAAGAGATTTAGAGCCTAGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR TCA 90 bp AGGAGTCAACAGGTGATTCTAGAACTAAAGCAAATGAAAGTGCAACCAACAAATTCTCCACAGGAGGGATaGTGTCTTCATAGTCTTTCA +
Preference number: 4 (lower is better)
Translates to: RSQQVILELKQMKVQPTNSPQEG*CLHSLS
Trigger: TGAAAGACTATGAAGACATCATCCCTCCTGTGGAGA...ATTTGTTGGTTGCACTTTCATTTGCTTTAGTTCTAGAATCACCTGTTGACTCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR TCA 90 bp TTTCTGATTTGGGGAAATTTCCCATTCTGGTATAGAACAAATGAGAAAGCTGGACTGCACATCCAGAATTaGTACTCAGTGATTGGGCTT +
Preference number: 4 (lower is better)
Translates to: FLIWGNFPFWYRTNEKAGLHIQN*YSVIGL
Trigger: AAGCCCAATCACTGAGTATCAATTCTGGATGTGCAG...TCCAGCTTTCTCATTTGTTCTATACCAGAATGGGAAATTTCCCCAAATCAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR TCA 90 bp AGGAGTCAACAGGTGATTCTAGAACTAAAGCAAATGAAAGTGCAACCAACAAATCTGCACATCCAGAATTaGTACTCAGTGATTGGGCTT +
Preference number: 4 (lower is better)
Translates to: RSQQVILELKQMKVQPTNLHIQN*YSVIGL
Trigger: AAGCCCAATCACTGAGTATCAATTCTGGATGTGCAG...ATTTGTTGGTTGCACTTTCATTTGCTTTAGTTCTAGAATCACCTGTTGACTCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR TCA 90 bp AGGAGTCAACAGGTGATTCTAGAACTAAAGCAAATGAAAGTGCAACCAACAAATCAATCTGCAACATGCTaGACTTGTCTCTGTCTCTAC +
Preference number: 4 (lower is better)
Translates to: RSQQVILELKQMKVQPTNQSATC*TCLCLY
Trigger: GTAGAGACAGAGACAAGTTCAGCATGTTGCAGATTG...ATTTGTTGGTTGCACTTTCATTTGCTTTAGTTCTAGAATCACCTGTTGACTCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR GCA 90 bp TTTCTGATTTGGGGAAATTTCCCATTCTGGTATAGAACAAATGAGAAAGCTGGATTCCAGGATACACACTaGAGCTTCACGTTATTGGGA +
Preference number: 4 (lower is better)
Translates to: FLIWGNFPFWYRTNEKAGFQDTH*SFTLLG
Trigger: TCCCAATAACGTGAAGCTGCAGTGTGTATCCTGGAA...TCCAGCTTTCTCATTTGTTCTATACCAGAATGGGAAATTTCCCCAAATCAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR GCA 90 bp CATCTAGGCTCTAAATCTCTTCTCATAGCTCACTATTCCCAATCTGCAACATGCCATTCCAGCTCATACTaGGAACAACTGATTTATTTC +
Preference number: 4 (lower is better)
Translates to: HLGSKSLLIAHYSQSATCHSSSY*EQLIYF
Trigger: GAAATAAATCAGTTGTTCGCAGTATGAGCTGGAATG...GCATGTTGCAGATTGGGAATAGTGAGCTATGAGAAGAGATTTAGAGCCTAGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR GCA 90 bp AAGTCTGAGGAGTCAACAGGTGATTCTAGAACTAAAGCAAATGAAAGTGCAACCCATCTTCATATACAATaGAGATCTTCTGTCCGTCAG +
Preference number: 4 (lower is better)
Translates to: KSEESTGDSRTKANESATHLHIQ*RSSVRQ
Trigger: CTGACGGACAGAAGATCTGCATTGTATATGAAGATG...GGTTGCACTTTCATTTGCTTTAGTTCTAGAATCACCTGTTGACTCCTCAGACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR GCA 90 bp TTTTATTTGGTTTATAAGGCTTTCTGTTCCATGACCTCTGGAATAGCTTGCGAGTTCCCCAAATACGATTaGCATCCACTGAACCAACTA +
Preference number: 4 (lower is better)
Translates to: FYLVYKAFCSMTSGIACEFPKYD*HPLNQL
Trigger: TAGTTGGTTCAGTGGATGGCAATCGTATTTGGGGAA...CTCGCAAGCTATTCCAGAGGTCATGGAACAGAAAGCCTTATAAACCAAATAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR GCA 90 bp AGGAGTCAACAGGTGATTCTAGAACTAAAGCAAATGAAAGTGCAACCAACAAATTGCTTCTTTCGAGGCTaGTATCACATGGGTTTTGGT +
Preference number: 4 (lower is better)
Translates to: RSQQVILELKQMKVQPTNCFFRG*YHMGFG
Trigger: ACCAAAACCCATGTGATAGCAGCCTCGAAAGAAGCA...ATTTGTTGGTTGCACTTTCATTTGCTTTAGTTCTAGAATCACCTGTTGACTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR GCA 90 bp ATGATGCTGTCTTCAATATACTACCTAATTCTGTTTATGCAACTTCTCACCAGGTGTATCTCTGAATGGTaGCAGATTCACGACCCACAA +
Preference number: 4 (lower is better)
Translates to: MMLSSIYYLILFMQLLTRCISEW*QIHDPQ
Trigger: TTGTGGGTCGTGAATCTGGCACCATTCAGAGATACA...CCTGGTGAGAAGTTGCATAAACAGAATTAGGTAGTATATTGAAGACAGCATCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR GCA 90 bp GTGGCCTCTGAACTTTTTCCTTTAACTTTTCCTCGCTGGGCATTCTTCATCTGTTGTCTTCTCCATCATTaGAAACAAATCAGGATTATC +
Preference number: 4 (lower is better)
Translates to: VASELFPLTFPRWAFFICCLLHH*KQIRII
Trigger: GATAATCCTGATTTGTTTGCAATGATGGAGAAGACA...ACAGATGAAGAATGCCCAGCGAGGAAAAGTTAAAGGAAAAAGTTCAGAGGCCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR GCA 90 bp TTTTATTTGGTTTATAAGGCTTTCTGTTCCATGACCTCTGGAATAGCTTGCGAGGCAGGTATCTACTGCTaGCTTTGGTTGACTACATTT +
Preference number: 4 (lower is better)
Translates to: FYLVYKAFCSMTSGIACEAGIYC*LWLTTF
Trigger: AAATGTAGTCAACCAAAGGCAGCAGTAGATACCTGC...CTCGCAAGCTATTCCAGAGGTCATGGAACAGAAAGCCTTATAAACCAAATAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR GCA 90 bp AGGAGTCAACAGGTGATTCTAGAACTAAAGCAAATGAAAGTGCAACCAACAAATCCATGGACTAAGAATTaGAGCTCTGACCAAACTGTC +
Preference number: 4 (lower is better)
Translates to: RSQQVILELKQMKVQPTNPWTKN*SSDQTV
Trigger: GACAGTTTGGTCAGAGCTGCAATTCTTAGTCCATGG...ATTTGTTGGTTGCACTTTCATTTGCTTTAGTTCTAGAATCACCTGTTGACTCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CCA 90 bp AAGTCTGAGGAGTCAACAGGTGATTCTAGAACTAAAGCAAATGAAAGTGCAACCGACAACACAATATTCTaGACGATCAGGTCTGGTATA +
Preference number: 4 (lower is better)
Translates to: KSEESTGDSRTKANESATDNTIF*TIRSGI
Trigger: TATACCAGACCTGATCGTCCAGAATATTGTGTTGTC...GGTTGCACTTTCATTTGCTTTAGTTCTAGAATCACCTGTTGACTCCTCAGACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CCA 90 bp CATCTAGGCTCTAAATCTCTTCTCATAGCTCACTATTCCCAATCTGCAACATGCCAATATCAATGTATTTaGGATCCAAGGGTGTACCAA +
Preference number: 4 (lower is better)
Translates to: HLGSKSLLIAHYSQSATCQYQCI*DPRVYQ
Trigger: TTGGTACACCCTTGGATCCCAAATACATTGATATTG...GCATGTTGCAGATTGGGAATAGTGAGCTATGAGAAGAGATTTAGAGCCTAGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CCA 90 bp CATCTAGGCTCTAAATCTCTTCTCATAGCTCACTATTCCCAATCTGCAACATGCCTATCACATGGGTTTTaGTCATTGCAACAAACAATG +
Preference number: 4 (lower is better)
Translates to: HLGSKSLLIAHYSQSATCLSHGF*SLQQTM
Trigger: CATTGTTTGTTGCAATGACCAAAACCCATGTGATAG...GCATGTTGCAGATTGGGAATAGTGAGCTATGAGAAGAGATTTAGAGCCTAGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CCA 90 bp AGGAGTCAACAGGTGATTCTAGAACTAAAGCAAATGAAAGTGCAACCAACAAATCCAGTTTTCAGGAGCTaGAGTACTCTAAACCAATCC +
Preference number: 4 (lower is better)
Translates to: RSQQVILELKQMKVQPTNPVFRS*STLNQS
Trigger: GGATTGGTTTAGAGTACTCCAGCTCCTGAAAACTGG...ATTTGTTGGTTGCACTTTCATTTGCTTTAGTTCTAGAATCACCTGTTGACTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CCA 90 bp AAGTCTGAGGAGTCAACAGGTGATTCTAGAACTAAAGCAAATGAAAGTGCAACCTTTCTGGAAGTGAAATaGCAAGGTTCTCTAACCCTT +
Preference number: 4 (lower is better)
Translates to: KSEESTGDSRTKANESATFLEVK*QGSLTL
Trigger: AAGGGTTAGAGAACCTTGCCATTTCACTTCCAGAAA...GGTTGCACTTTCATTTGCTTTAGTTCTAGAATCACCTGTTGACTCCTCAGACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CCA 90 bp TTTTATTTGGTTTATAAGGCTTTCTGTTCCATGACCTCTGGAATAGCTTGCGAGGGAATAATTCGTTGGTaGGAAAATTCTAGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: FYLVYKAFCSMTSGIACEGIIRW*ENSRAQ
Trigger: CTGAGCCCTAGAATTTTCCCACCAACGAATTATTCC...CTCGCAAGCTATTCCAGAGGTCATGGAACAGAAAGCCTTATAAACCAAATAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CCA 90 bp CTTGTTAGGCACACTGCTTATTTGTACAGCTTTATCAGTCAGTTCCATCATTTCCCTGGAATAATTCGTTaGTGGGAAAATTCTAGGGCT +
Preference number: 4 (lower is better)
Translates to: LVRHTAYLYSFISQFHHFPGIIR*WENSRA
Trigger: AGCCCTAGAATTTTCCCACCAACGAATTATTCCAGG...GAAATGATGGAACTGACTGATAAAGCTGTACAAATAAGCAGTGTGCCTAACAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR TCA 90 bp TTTCTGATTTGGGGAAATTTCCCATTCTGGTATAGAACAAATGAGAAAGCTGGACTGGTAGTCAACTTCTaGTACTGCTCATTCCATGTT +
Preference number: 4 (lower is better)
Translates to: FLIWGNFPFWYRTNEKAGLVVNF*YCSFHV
Trigger: AACATGGAATGAGCAGTATCAGAAGTTGACTACCAG...TCCAGCTTTCTCATTTGTTCTATACCAGAATGGGAAATTTCCCCAAATCAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR TCA 90 bp ATGATGCTGTCTTCAATATACTACCTAATTCTGTTTATGCAACTTCTCACCAGGGAAAGTCAGAACTCCTaGGATGTCTATGATAGCAAG +
Preference number: 4 (lower is better)
Translates to: MMLSSIYYLILFMQLLTRESQNS*DVYDSK
Trigger: CTTGCTATCATAGACATCTCAGGAGTTCTGACTTTC...CCTGGTGAGAAGTTGCATAAACAGAATTAGGTAGTATATTGAAGACAGCATCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR TCA 90 bp AAGTCTGAGGAGTCAACAGGTGATTCTAGAACTAAAGCAAATGAAAGTGCAACCTTGTCCTCTATGAACTaGGATGCATCTTTAATTCCA +
Preference number: 4 (lower is better)
Translates to: KSEESTGDSRTKANESATLSSMN*DASLIP
Trigger: TGGAATTAAAGATGCATCTCAGTTCATAGAGGACAA...GGTTGCACTTTCATTTGCTTTAGTTCTAGAATCACCTGTTGACTCCTCAGACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR TCA 90 bp AGGAGTCAACAGGTGATTCTAGAACTAAAGCAAATGAAAGTGCAACCAACAAATCTTTGTTCCATTGGTTaGGATGTACGCAGGTATCTA +
Preference number: 4 (lower is better)
Translates to: RSQQVILELKQMKVQPTNLCSIG*DVRRYL
Trigger: TAGATACCTGCGTACATCTCAACCAATGGAACAAAG...ATTTGTTGGTTGCACTTTCATTTGCTTTAGTTCTAGAATCACCTGTTGACTCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR TCA 90 bp CTTGTTAGGCACACTGCTTATTTGTACAGCTTTATCAGTCAGTTCCATCATTTCGTACATAGAGCTTCTTaGCACGTAAAGGTTTACTTC +
Preference number: 4 (lower is better)
Translates to: LVRHTAYLYSFISQFHHFVHRAS*HVKVYF
Trigger: GAAGTAAACCTTTACGTGTCAAGAAGCTCTATGTAC...GAAATGATGGAACTGACTGATAAAGCTGTACAAATAAGCAGTGTGCCTAACAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR TCA 90 bp TTTTATTTGGTTTATAAGGCTTTCTGTTCCATGACCTCTGGAATAGCTTGCGAGACAAAAGAGAGAGGGTaGGAGAAAACATGGTTGATT +
Preference number: 4 (lower is better)
Translates to: FYLVYKAFCSMTSGIACETKERG*EKTWLI
Trigger: AATCAACCATGTTTTCTCTCACCCTCTCTCTTTTGT...CTCGCAAGCTATTCCAGAGGTCATGGAACAGAAAGCCTTATAAACCAAATAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR GCA 90 bp CATCTAGGCTCTAAATCTCTTCTCATAGCTCACTATTCCCAATCTGCAACATGCTTTGCATCATCTGTCTaGGTCTCTAATTTCAAAACT +
Preference number: 4 (lower is better)
Translates to: HLGSKSLLIAHYSQSATCFASSV*VSNFKT
Trigger: AGTTTTGAAATTAGAGACGCAGACAGATGATGCAAA...GCATGTTGCAGATTGGGAATAGTGAGCTATGAGAAGAGATTTAGAGCCTAGATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR GCA 90 bp AAGTCTGAGGAGTCAACAGGTGATTCTAGAACTAAAGCAAATGAAAGTGCAACCCATTCCAGCTCATACTaGGAACAACTGATTTATTTC +
Preference number: 4 (lower is better)
Translates to: KSEESTGDSRTKANESATHSSSY*EQLIYF
Trigger: GAAATAAATCAGTTGTTCGCAGTATGAGCTGGAATG...GGTTGCACTTTCATTTGCTTTAGTTCTAGAATCACCTGTTGACTCCTCAGACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR GCA 90 bp CTTTGCCTCTTCATCTGCAATCTAGCTAACAGAGATCCAATTTCTTTCATACTATTCCCCAAATACGATTaGCATCCACTGAACCAACTA +
Preference number: 4 (lower is better)
Translates to: LCLFICNLANRDPISFILFPKYD*HPLNQL
Trigger: TAGTTGGTTCAGTGGATGGCAATCGTATTTGGGGAA...TAGTATGAAAGAAATTGGATCTCTGTTAGCTAGATTGCAGATGAAGAGGCAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414212.5
CDS-3UTR GCA 90 bp ATGATGCTGTCTTCAATATACTACCTAATTCTGTTTATGCAACTTCTCACCAGGGCAGGTATCTACTGCTaGCTTTGGTTGACTACATTT +
Preference number: 4 (lower is better)
Translates to: MMLSSIYYLILFMQLLTRAGIYC*LWLTTF
Trigger: AAATGTAGTCAACCAAAGGCAGCAGTAGATACCTGC...CCTGGTGAGAAGTTGCATAAACAGAATTAGGTAGTATATTGAAGACAGCATCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR GCA 90 bp TTTTATTTGGTTTATAAGGCTTTCTGTTCCATGACCTCTGGAATAGCTTGCGAGATAGAGCTGCCTCTGTaGAAGTATAAAGAAGTGGTA +
Preference number: 4 (lower is better)
Translates to: FYLVYKAFCSMTSGIACEIELPL*KYKEVV
Trigger: TACCACTTCTTTATACTTGCACAGAGGCAGCTCTAT...CTCGCAAGCTATTCCAGAGGTCATGGAACAGAAAGCCTTATAAACCAAATAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR GCA 90 bp AAGTCTGAGGAGTCAACAGGTGATTCTAGAACTAAAGCAAATGAAAGTGCAACCGTGTTAATCTATCATTaGTTTCTCCTTGTTCCTCAC +
Preference number: 4 (lower is better)
Translates to: KSEESTGDSRTKANESATVLIYH*FLLVPH
Trigger: GTGAGGAACAAGGAGAAAGCAATGATAGATTAACAC...GGTTGCACTTTCATTTGCTTTAGTTCTAGAATCACCTGTTGACTCCTCAGACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR GCA 90 bp AGGAGTCAACAGGTGATTCTAGAACTAAAGCAAATGAAAGTGCAACCAACAAATAGTCCTGTGGAAAGATaGAAGTTCAACAGGAGATGT +
Preference number: 4 (lower is better)
Translates to: RSQQVILELKQMKVQPTNSPVER*KFNRRC
Trigger: ACATCTCCTGTTGAACTTGCATCTTTCCACAGGACT...ATTTGTTGGTTGCACTTTCATTTGCTTTAGTTCTAGAATCACCTGTTGACTCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR GCA 90 bp TTTTATTTGGTTTATAAGGCTTTCTGTTCCATGACCTCTGGAATAGCTTGCGAGTCAACATTACTGTGTTaGTTGTTAGGCACACTGCTT +
Preference number: 4 (lower is better)
Translates to: FYLVYKAFCSMTSGIACESTLLC*LLGTLL
Trigger: AAGCAGTGTGCCTAACAAGCAACACAGTAATGTTGA...CTCGCAAGCTATTCCAGAGGTCATGGAACAGAAAGCCTTATAAACCAAATAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CCA 90 bp CATCTAGGCTCTAAATCTCTTCTCATAGCTCACTATTCCCAATCTGCAACATGCATCAAAACGGGATTTTaGTCATTCTCATGTCTCATT +
Preference number: 4 (lower is better)
Translates to: HLGSKSLLIAHYSQSATCIKTGF*SFSCLI
Trigger: AATGAGACATGAGAATGACCAAAATCCCGTTTTGAT...GCATGTTGCAGATTGGGAATAGTGAGCTATGAGAAGAGATTTAGAGCCTAGATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CCA 90 bp ATGATGCTGTCTTCAATATACTACCTAATTCTGTTTATGCAACTTCTCACCAGGCTGGACGATCAGGTCTaGTATATGCATAAACTACAG +
Preference number: 4 (lower is better)
Translates to: MMLSSIYYLILFMQLLTRLDDQV*YMHKLQ
Trigger: CTGTAGTTTATGCATATACCAGACCTGATCGTCCAG...CCTGGTGAGAAGTTGCATAAACAGAATTAGGTAGTATATTGAAGACAGCATCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CCA 90 bp AATCAGGATTATCTTTGGCCCACTTCATATCCCAGACATCTCTTCGTTCCAATTCCCTTGTGCCTTGAATaGTTTTACTATAATCAAGCA +
Preference number: 4 (lower is better)
Translates to: NQDYLWPTSYPRHLFVPIPLCLE*FYYNQA
Trigger: TGCTTGATTATAGTAAAACCATTCAAGGCACAAGGG...AATTGGAACGAAGAGATGTCTGGGATATGAAGTGGGCCAAAGATAATCCTGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445063.5
CDS-3UTR CCA 90 bp CATCTAGGCTCTAAATCTCTTCTCATAGCTCACTATTCCCAATCTGCAACATGCATCTACTGCTGCCTTTaGTTGACTACATTTCAAAAA +
Preference number: 4 (lower is better)
Translates to: HLGSKSLLIAHYSQSATCIYCCL*LTTFQK
Trigger: TTTTTGAAATGTAGTCAACCAAAGGCAGCAGTAGAT...GCATGTTGCAGATTGGGAATAGTGAGCTATGAGAAGAGATTTAGAGCCTAGATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CCA 90 bp AGGAGTCAACAGGTGATTCTAGAACTAAAGCAAATGAAAGTGCAACCAACAAATACAGCTTTGTTCCATTaGTTGAGATGTACGCAGGTA +
Preference number: 4 (lower is better)
Translates to: RSQQVILELKQMKVQPTNTALFH*LRCTQV
Trigger: TACCTGCGTACATCTCAACCAATGGAACAAAGCTGT...ATTTGTTGGTTGCACTTTCATTTGCTTTAGTTCTAGAATCACCTGTTGACTCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CCA 90 bp CATCTAGGCTCTAAATCTCTTCTCATAGCTCACTATTCCCAATCTGCAACATGCTCCGATAGAGTTCTATaGCATCAAGAGTTTTATTCT +
Preference number: 4 (lower is better)
Translates to: HLGSKSLLIAHYSQSATCSDRVL*HQEFYS
Trigger: AGAATAAAACTCTTGATGCCATAGAACTCTATCGGA...GCATGTTGCAGATTGGGAATAGTGAGCTATGAGAAGAGATTTAGAGCCTAGATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CCA 90 bp CTTGTTAGGCACACTGCTTATTTGTACAGCTTTATCAGTCAGTTCCATCATTTCTTAACTTTTCCTCGCTaGGCATTCTTCATCTGTTCA +
Preference number: 4 (lower is better)
Translates to: LVRHTAYLYSFISQFHHFLTFPR*AFFICS
Trigger: TGAACAGATGAAGAATGCCCAGCGAGGAAAAGTTAA...GAAATGATGGAACTGACTGATAAAGCTGTACAAATAAGCAGTGTGCCTAACAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CCA 90 bp TCAATATCTTATCTGATGCAGTTATGGCACAAATTGGATCCCTTGTGCCTTGAATTAACTTTTCCTCGCTaGGCATTCTTCATCTGTTCA +
Preference number: 4 (lower is better)
Translates to: SISYLMQLWHKLDPLCLELTFPR*AFFICS
Trigger: TGAACAGATGAAGAATGCCCAGCGAGGAAAAGTTAA...TTCAAGGCACAAGGGATCCAATTTGTGCCATAACTGCATCAGATAAGATATTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445063.5
CDS-3UTR CCA 90 bp CTTGTTAGGCACACTGCTTATTTGTACAGCTTTATCAGTCAGTTCCATCATTTCAATAGTGCAAAGGTCTaGTCTTTAGCCACAAAATGG +
Preference number: 4 (lower is better)
Translates to: LVRHTAYLYSFISQFHHFNSAKV*SLATKW
Trigger: CCATTTTGTGGCTAAAGACCAGACCTTTGCACTATT...GAAATGATGGAACTGACTGATAAAGCTGTACAAATAAGCAGTGTGCCTAACAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CCA 90 bp TTTTATTTGGTTTATAAGGCTTTCTGTTCCATGACCTCTGGAATAGCTTGCGAGAATAGTGCAAAGGTCTaGTCTTTAGCCACAAAATGG +
Preference number: 4 (lower is better)
Translates to: FYLVYKAFCSMTSGIACENSAKV*SLATKW
Trigger: CCATTTTGTGGCTAAAGACCAGACCTTTGCACTATT...CTCGCAAGCTATTCCAGAGGTCATGGAACAGAAAGCCTTATAAACCAAATAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CCA 90 bp CTTGTTAGGCACACTGCTTATTTGTACAGCTTTATCAGTCAGTTCCATCATTTCAACTTAGGATCTACCTaGAATAATTCGTTGGTGGGA +
Preference number: 4 (lower is better)
Translates to: LVRHTAYLYSFISQFHHFNLGST*NNSLVG
Trigger: TCCCACCAACGAATTATTCCAGGTAGATCCTAAGTT...GAAATGATGGAACTGACTGATAAAGCTGTACAAATAAGCAGTGTGCCTAACAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR TCA 90 bp ATGATGCTGTCTTCAATATACTACCTAATTCTGTTTATGCAACTTCTCACCAGGCCATCGCCTCACTTCTaGAAATACAATAAAGAAGAC +
Preference number: 4 (lower is better)
Translates to: MMLSSIYYLILFMQLLTRPSPHF*KYNKED
Trigger: GTCTTCTTTATTGTATTTTCAGAAGTGAGGCGATGG...CCTGGTGAGAAGTTGCATAAACAGAATTAGGTAGTATATTGAAGACAGCATCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR GCA 90 bp TTTTATTTGGTTTATAAGGCTTTCTGTTCCATGACCTCTGGAATAGCTTGCGAGGAATGGAAATTTTCTTaGTCAGGTAGAAGAACATCG +
Preference number: 4 (lower is better)
Translates to: FYLVYKAFCSMTSGIACEEWKFS*SGRRTS
Trigger: CGATGTTCTTCTACCTGAGCAAGAAAATTTCCATTC...CTCGCAAGCTATTCCAGAGGTCATGGAACAGAAAGCCTTATAAACCAAATAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR GCA 90 bp TTTCTGATTTGGGGAAATTTCCCATTCTGGTATAGAACAAATGAGAAAGCTGGACTGATTAATTTCCAATaGTGTGAGCTTCTTTGCCAC +
Preference number: 4 (lower is better)
Translates to: FLIWGNFPFWYRTNEKAGLINFQ*CELLCH
Trigger: GTGGCAAAGAAGCTCACAGCATTGGAAATTAATCAG...TCCAGCTTTCTCATTTGTTCTATACCAGAATGGGAAATTTCCCCAAATCAGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR GCA 90 bp CTTGTTAGGCACACTGCTTATTTGTACAGCTTTATCAGTCAGTTCCATCATTTCATCTGTTCATGGTATTaGTCTATAAGTAAGGCTGAC +
Preference number: 4 (lower is better)
Translates to: LVRHTAYLYSFISQFHHFICSWY*SISKAD
Trigger: GTCAGCCTTACTTATAGAGCAATACCATGAACAGAT...GAAATGATGGAACTGACTGATAAAGCTGTACAAATAAGCAGTGTGCCTAACAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR GCA 90 bp TTTCTGATTTGGGGAAATTTCCCATTCTGGTATAGAACAAATGAGAAAGCTGGAATAGAGCTGCCTCTGTaGAAGTATAAAGAAGTGGTA +
Preference number: 4 (lower is better)
Translates to: FLIWGNFPFWYRTNEKAGIELPL*KYKEVV
Trigger: TACCACTTCTTTATACTTGCACAGAGGCAGCTCTAT...TCCAGCTTTCTCATTTGTTCTATACCAGAATGGGAAATTTCCCCAAATCAGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR GCA 90 bp AGGAGTCAACAGGTGATTCTAGAACTAAAGCAAATGAAAGTGCAACCAACAAATTCAACATTACTGTGTTaGTTGTTAGGCACACTGCTT +
Preference number: 4 (lower is better)
Translates to: RSQQVILELKQMKVQPTNSTLLC*LLGTLL
Trigger: AAGCAGTGTGCCTAACAAGCAACACAGTAATGTTGA...ATTTGTTGGTTGCACTTTCATTTGCTTTAGTTCTAGAATCACCTGTTGACTCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CCA 90 bp CTTGTTAGGCACACTGCTTATTTGTACAGCTTTATCAGTCAGTTCCATCATTTCTCACGTTATTGGGAATaGAAATTTTCTTGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: LVRHTAYLYSFISQFHHFSRYWE*KFSCSG
Trigger: ACCTGAGCAAGAAAATTTCCATTCCCAATAACGTGA...GAAATGATGGAACTGACTGATAAAGCTGTACAAATAAGCAGTGTGCCTAACAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CCA 90 bp CTTTGCCTCTTCATCTGCAATCTAGCTAACAGAGATCCAATTTCTTTCATACTAGCAGCTTCACGTTATTaGGAATGGAAATTTTCTTGC +
Preference number: 4 (lower is better)
Translates to: LCLFICNLANRDPISFILAASRY*EWKFSC
Trigger: GCAAGAAAATTTCCATTCCCAATAACGTGAAGCTGC...TAGTATGAAAGAAATTGGATCTCTGTTAGCTAGATTGCAGATGAAGAGGCAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414212.5
CDS-3UTR CCA 90 bp CTTGTTAGGCACACTGCTTATTTGTACAGCTTTATCAGTCAGTTCCATCATTTCCAATATCAATGTATTTaGGATCCAAGGGTGTACCAA +
Preference number: 4 (lower is better)
Translates to: LVRHTAYLYSFISQFHHFQYQCI*DPRVYQ
Trigger: TTGGTACACCCTTGGATCCCAAATACATTGATATTG...GAAATGATGGAACTGACTGATAAAGCTGTACAAATAAGCAGTGTGCCTAACAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CCA 90 bp CTTGTTAGGCACACTGCTTATTTGTACAGCTTTATCAGTCAGTTCCATCATTTCCTATCACATGGGTTTTaGTCATTGCAACAAACAATG +
Preference number: 4 (lower is better)
Translates to: LVRHTAYLYSFISQFHHFLSHGF*SLQQTM
Trigger: CATTGTTTGTTGCAATGACCAAAACCCATGTGATAG...GAAATGATGGAACTGACTGATAAAGCTGTACAAATAAGCAGTGTGCCTAACAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CCA 90 bp TTTTATTTGGTTTATAAGGCTTTCTGTTCCATGACCTCTGGAATAGCTTGCGAGCCCTTGTGCCTTGAATaGTTTTACTATAATCAAGCA +
Preference number: 4 (lower is better)
Translates to: FYLVYKAFCSMTSGIACEPLCLE*FYYNQA
Trigger: TGCTTGATTATAGTAAAACCATTCAAGGCACAAGGG...CTCGCAAGCTATTCCAGAGGTCATGGAACAGAAAGCCTTATAAACCAAATAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CCA 90 bp AGGAGTCAACAGGTGATTCTAGAACTAAAGCAAATGAAAGTGCAACCAACAAATTATCTGATGCAGTTATaGCACAAATTGGATCCCTTG +
Preference number: 4 (lower is better)
Translates to: RSQQVILELKQMKVQPTNYLMQL*HKLDPL
Trigger: CAAGGGATCCAATTTGTGCCATAACTGCATCAGATA...ATTTGTTGGTTGCACTTTCATTTGCTTTAGTTCTAGAATCACCTGTTGACTCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CCA 90 bp TTTCTGATTTGGGGAAATTTCCCATTCTGGTATAGAACAAATGAGAAAGCTGGAAACTTAGGATCTACCTaGAATAATTCGTTGGTGGGA +
Preference number: 4 (lower is better)
Translates to: FLIWGNFPFWYRTNEKAGNLGST*NNSLVG
Trigger: TCCCACCAACGAATTATTCCAGGTAGATCCTAAGTT...TCCAGCTTTCTCATTTGTTCTATACCAGAATGGGAAATTTCCCCAAATCAGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CCA 90 bp CTTGTTAGGCACACTGCTTATTTGTACAGCTTTATCAGTCAGTTCCATCATTTCAGAGATACTGGTTTCTaGATCCAACTGAATGAGAAA +
Preference number: 4 (lower is better)
Translates to: LVRHTAYLYSFISQFHHFRDTGF*IQLNEK
Trigger: TTTCTCATTCAGTTGGATCCAGAAACCAGTATCTCT...GAAATGATGGAACTGACTGATAAAGCTGTACAAATAAGCAGTGTGCCTAACAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
3UTR CAA 72 bp TACAGCTTTATCAGTCAGTTCCATCATTTCAATATTTaGGCCCACCACACCACTTTGAAACATGTAATGAAG +
Preference number: 4 (lower is better)
Translates to: YSFISQFHHFNI*AHHTTLKHVMK
Trigger: CTTCATTACATGTTTCAAAGTGGTGTGGTGGGCCAAAATATTGAAATGATGGAACTGACTGATAAAGCTGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR GCA 90 bp TTTCTGATTTGGGGAAATTTCCCATTCTGGTATAGAACAAATGAGAAAGCTGGAGAATGGAAATTTTCTTaGTCAGGTAGAAGAACATCG +
Preference number: 4 (lower is better)
Translates to: FLIWGNFPFWYRTNEKAGEWKFS*SGRRTS
Trigger: CGATGTTCTTCTACCTGAGCAAGAAAATTTCCATTC...TCCAGCTTTCTCATTTGTTCTATACCAGAATGGGAAATTTCCCCAAATCAGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR GCA 90 bp CTTGTTAGGCACACTGCTTATTTGTACAGCTTTATCAGTCAGTTCCATCATTTCTGTCTTCTCCATCATTaGAAACAAATCAGGATTATC +
Preference number: 4 (lower is better)
Translates to: LVRHTAYLYSFISQFHHFCLLHH*KQIRII
Trigger: GATAATCCTGATTTGTTTGCAATGATGGAGAAGACA...GAAATGATGGAACTGACTGATAAAGCTGTACAAATAAGCAGTGTGCCTAACAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR GCA 90 bp CTTGTTAGGCACACTGCTTATTTGTACAGCTTTATCAGTCAGTTCCATCATTTCTTTACTTCCTTTCTTTaGCTCTTCATCTGCAATCTT +
Preference number: 4 (lower is better)
Translates to: LVRHTAYLYSFISQFHHFFTSFL*LFICNL
Trigger: AAGATTGCAGATGAAGAGGCAAAGAAAGGAAGTAAA...GAAATGATGGAACTGACTGATAAAGCTGTACAAATAAGCAGTGTGCCTAACAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR GCA 90 bp ATGATGCTGTCTTCAATATACTACCTAATTCTGTTTATGCAACTTCTCACCAGGATCTGTTCATGGTATTaGTCTATAAGTAAGGCTGAC +
Preference number: 4 (lower is better)
Translates to: MMLSSIYYLILFMQLLTRICSWY*SISKAD
Trigger: GTCAGCCTTACTTATAGAGCAATACCATGAACAGAT...CCTGGTGAGAAGTTGCATAAACAGAATTAGGTAGTATATTGAAGACAGCATCAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR GCA 90 bp AGGAGTCAACAGGTGATTCTAGAACTAAAGCAAATGAAAGTGCAACCAACAAATGTGTTAATCTATCATTaGTTTCTCCTTGTTCCTCAC +
Preference number: 4 (lower is better)
Translates to: RSQQVILELKQMKVQPTNVLIYH*FLLVPH
Trigger: GTGAGGAACAAGGAGAAAGCAATGATAGATTAACAC...ATTTGTTGGTTGCACTTTCATTTGCTTTAGTTCTAGAATCACCTGTTGACTCCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CCA 90 bp AGGAGTCAACAGGTGATTCTAGAACTAAAGCAAATGAAAGTGCAACCAACAAATCCCTTGTGCCTTGAATaGTTTTACTATAATCAAGCA +
Preference number: 4 (lower is better)
Translates to: RSQQVILELKQMKVQPTNPLCLE*FYYNQA
Trigger: TGCTTGATTATAGTAAAACCATTCAAGGCACAAGGG...ATTTGTTGGTTGCACTTTCATTTGCTTTAGTTCTAGAATCACCTGTTGACTCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CCA 90 bp TTTTATTTGGTTTATAAGGCTTTCTGTTCCATGACCTCTGGAATAGCTTGCGAGATCTACTGCTGCCTTTaGTTGACTACATTTCAAAAA +
Preference number: 4 (lower is better)
Translates to: FYLVYKAFCSMTSGIACEIYCCL*LTTFQK
Trigger: TTTTTGAAATGTAGTCAACCAAAGGCAGCAGTAGAT...CTCGCAAGCTATTCCAGAGGTCATGGAACAGAAAGCCTTATAAACCAAATAAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CCA 90 bp ATGATGCTGTCTTCAATATACTACCTAATTCTGTTTATGCAACTTCTCACCAGGAAACAGAAAGTCCTGTaGAAAGATGCAAGTTCAACA +
Preference number: 4 (lower is better)
Translates to: MMLSSIYYLILFMQLLTRKQKVL*KDASST
Trigger: TGTTGAACTTGCATCTTTCCACAGGACTTTCTGTTT...CCTGGTGAGAAGTTGCATAAACAGAATTAGGTAGTATATTGAAGACAGCATCAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CCA 90 bp AGGAGTCAACAGGTGATTCTAGAACTAAAGCAAATGAAAGTGCAACCAACAAATAAACAGAAAGTCCTGTaGAAAGATGCAAGTTCAACA +
Preference number: 4 (lower is better)
Translates to: RSQQVILELKQMKVQPTNKQKVL*KDASST
Trigger: TGTTGAACTTGCATCTTTCCACAGGACTTTCTGTTT...ATTTGTTGGTTGCACTTTCATTTGCTTTAGTTCTAGAATCACCTGTTGACTCCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR GCA 90 bp ATGATGCTGTCTTCAATATACTACCTAATTCTGTTTATGCAACTTCTCACCAGGTTTGCATCATCTGTCTaGGTCTCTAATTTCAAAACT +
Preference number: 4 (lower is better)
Translates to: MMLSSIYYLILFMQLLTRFASSV*VSNFKT
Trigger: AGTTTTGAAATTAGAGACGCAGACAGATGATGCAAA...CCTGGTGAGAAGTTGCATAAACAGAATTAGGTAGTATATTGAAGACAGCATCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR GCA 90 bp TTTCTGATTTGGGGAAATTTCCCATTCTGGTATAGAACAAATGAGAAAGCTGGAATGGGTTTTGGTCATTaGAACAAACAATGGTACAAT +
Preference number: 4 (lower is better)
Translates to: FLIWGNFPFWYRTNEKAGMGFGH*NKQWYN
Trigger: ATTGTACCATTGTTTGTTGCAATGACCAAAACCCAT...TCCAGCTTTCTCATTTGTTCTATACCAGAATGGGAAATTTCCCCAAATCAGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR GCA 90 bp ATGATGCTGTCTTCAATATACTACCTAATTCTGTTTATGCAACTTCTCACCAGGAAATTGGATCCCTTGTaGCTTGAATGGTTTTACTAT +
Preference number: 4 (lower is better)
Translates to: MMLSSIYYLILFMQLLTRKLDPL*LEWFYY
Trigger: ATAGTAAAACCATTCAAGGCACAAGGGATCCAATTT...CCTGGTGAGAAGTTGCATAAACAGAATTAGGTAGTATATTGAAGACAGCATCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR GCA 90 bp ATGATGCTGTCTTCAATATACTACCTAATTCTGTTTATGCAACTTCTCACCAGGCTCTATGAACTGAGATaGATCTTTAATTCCAACCTT +
Preference number: 4 (lower is better)
Translates to: MMLSSIYYLILFMQLLTRLYELR*IFNSNL
Trigger: AAGGTTGGAATTAAAGATGCATCTCAGTTCATAGAG...CCTGGTGAGAAGTTGCATAAACAGAATTAGGTAGTATATTGAAGACAGCATCAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR GCA 90 bp AGGAGTCAACAGGTGATTCTAGAACTAAAGCAAATGAAAGTGCAACCAACAAATACTACATTTCAAAAATaGAGTCACTGCTTGTTCACA +
Preference number: 4 (lower is better)
Translates to: RSQQVILELKQMKVQPTNTTFQK*SHCLFT
Trigger: TGTGAACAAGCAGTGACTGCATTTTTGAAATGTAGT...ATTTGTTGGTTGCACTTTCATTTGCTTTAGTTCTAGAATCACCTGTTGACTCCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
3UTR CAA 72 bp AACATTACTGTGTTGCTTGTTAGGCACACTGCTTATTaGTACAGCTTTATCAGTCAGTTCCATCATTTCAAT +
Preference number: 4 (lower is better)
Translates to: NITVLLVRHTAY*YSFISQFHHFN
Trigger: ATTGAAATGATGGAACTGACTGATAAAGCTGTACAAATAAGCAGTGTGCCTAACAAGCAACACAGTAATGTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
3UTR CAA 72 bp CTTGAATGGTTTTACTATAATCAAGCACACCATCCATaGATCCAGAAGGGGTATCATCAACATGATAAATTC +
Preference number: 4 (lower is better)
Translates to: LEWFYYNQAHHP*IQKGYHQHDKF
Trigger: GAATTTATCATGTTGATGATACCCCTTCTGGATCAATGGATGGTGTGCTTGATTATAGTAAAACCATTCAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445063.5
3UTR CAA 72 bp ATTTGTGAATTAAGCATGTCAACATTACTGTGTTGCTaGTTAGGCACACTGCTTATTTGTACAGCTTTATCA +
Preference number: 4 (lower is better)
Translates to: ICELSMSTLLCC*LGTLLICTALS
Trigger: TGATAAAGCTGTACAAATAAGCAGTGTGCCTAACAAGCAACACAGTAATGTTGACATGCTTAATTCACAAAT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
3UTR CAA 72 bp CAATCAATATCTTATCTGATGCAGTTATGGCACAAATaGGATCCCTTGTGCCTTGAATGGTTTTACTATAAT +
Preference number: 4 (lower is better)
Translates to: QSISYLMQLWHK*DPLCLEWFYYN
Trigger: ATTATAGTAAAACCATTCAAGGCACAAGGGATCCAATTTGTGCCATAACTGCATCAGATAAGATATTGATTG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445063.5
CDS GCA 90 bp TGTCCTGCATGGCTGCCTTCTGGAAGCCTGCCACAGCTAACACGCTaGCCATGTGGTTCCACTGGATGCCTACTACGTACATGCCAGTGT +
Preference number: 5 (lower is better)
Translates to: CPAWLPSGSLPQLTR*PCGSTGCLLRTCQC
Trigger: ACACTGGCATGTACGTAGTAGGCATCCAGTGGAACCACATGGGCAGCGTGTTAGCTGTGGCAGGCTTCCAGAAGGCAGCCATGCAGGACA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281405.9
ENST00000345530.8
ENST00000414212.5
ENST00000445063.5
CDS-3UTR CAA 90 bp CTCTGCTGGCGCATGCGCAGAGTGCTAGCAGAGAGTAGATCTCCACAGGAGGGAGCAAGGACACCGTGTTaGCATACACTGCACATCCAG +
Preference number: 5 (lower is better)
Translates to: LCWRMRRVLAESRSPQEGARTPC*HTLHIQ
Trigger: CTGGATGTGCAGTGTATGCAAACACGGTGTCCTTGC...TCCCTCCTGTGGAGATCTACTCTCTGCTAGCACTCTGCGCATGCGCCAGCAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414212.5
CDS-3UTR CAA 90 bp CTCTGCTGGCGCATGCGCAGAGTGCTAGCAGAGAGTAGATCTCCACAGGAGGGAGACTCACTCAGTAGTTaGCCCAAGCGCTTCACAAAC +
Preference number: 5 (lower is better)
Translates to: LCWRMRRVLAESRSPQEGDSLSS*PKRFTN
Trigger: GTTTGTGAAGCGCTTGGGCAAACTACTGAGTGAGTC...TCCCTCCTGTGGAGATCTACTCTCTGCTAGCACTCTGCGCATGCGCCAGCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414212.5
CDS CCA 90 bp ATGGCTGCCTTCTGGAAGCCTGCCACAGCTAACACGCTGCCCATGTaGTTCCACTGGATGCCTACTACGTACATGCCAGTGTCAATCAAA +
Preference number: 5 (lower is better)
Translates to: MAAFWKPATANTLPM*FHWMPTTYMPVSIK
Trigger: TTTGATTGACACTGGCATGTACGTAGTAGGCATCCAGTGGAACCACATGGGCAGCGTGTTAGCTGTGGCAGGCTTCCAGAAGGCAGCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281405.9
ENST00000345530.8
ENST00000414212.5
ENST00000445063.5
CDS-3UTR CAA 90 bp GCCTCAGGCACATTTCATCTGATTGAGTCATCTGGCTCAAGCGGCCACTCTGGTCAACTCTCCAACTACTaGCTGTCCCGTACTGTCCGT +
Preference number: 5 (lower is better)
Translates to: ASGTFHLIESSGSSGHSGQLSNY*LSRTVR
Trigger: ACGGACAGTACGGGACAGCAAGTAGTTGGAGAGTTG...ACCAGAGTGGCCGCTTGAGCCAGATGACTCAATCAGATGAAATGTGCCTGAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CAA 90 bp CTCTGCTGGCGCATGCGCAGAGTGCTAGCAGAGAGTAGATCTCCACAGGAGGGACTTCAGCCTGTTTCATaGACTCACTCAGTAGTTTGC +
Preference number: 5 (lower is better)
Translates to: LCWRMRRVLAESRSPQEGLQPVS*THSVVC
Trigger: GCAAACTACTGAGTGAGTCAATGAAACAGGCTGAAG...TCCCTCCTGTGGAGATCTACTCTCTGCTAGCACTCTGCGCATGCGCCAGCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414212.5
CDS GCA 90 bp GGAAGCCTGCCACAGCTAACACGCTGCCCATGTGGTTCCACTGGATaGCTACTACGTACATGCCAGTGTCAATCAAAACGGGATTTTGGT +
Preference number: 5 (lower is better)
Translates to: GSLPQLTRCPCGSTG*LLRTCQCQSKRDFG
Trigger: ACCAAAATCCCGTTTTGATTGACACTGGCATGTACGTAGTAGGCATCCAGTGGAACCACATGGGCAGCGTGTTAGCTGTGGCAGGCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281405.9
ENST00000345530.8
ENST00000414212.5
ENST00000445063.5
CDS-3UTR CAA 90 bp CTGTCTTCAGTGCAGTGTCCACACATCCCTCATAGAGCTGCCTCTGTGCAAGTACAACTCTCCAACTACTaGCTGTCCCGTACTGTCCGT +
Preference number: 5 (lower is better)
Translates to: LSSVQCPHIPHRAASVQVQLSNY*LSRTVR
Trigger: ACGGACAGTACGGGACAGCAAGTAGTTGGAGAGTTG...TACTTGCACAGAGGCAGCTCTATGAGGGATGTGTGGACACTGCACTGAAGACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR CAA 90 bp GCCTCAGGCACATTTCATCTGATTGAGTCATCTGGCTCAAGCGGCCACTCTGGTGCCCACCACACCACTTaGAAACATGTAATGAAGGGC +
Preference number: 5 (lower is better)
Translates to: ASGTFHLIESSGSSGHSGAHHTT*KHVMKG
Trigger: GCCCTTCATTACATGTTTCAAAGTGGTGTGGTGGGC...ACCAGAGTGGCCGCTTGAGCCAGATGACTCAATCAGATGAAATGTGCCTGAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS CCA 90 bp TTCTGGAAGCCTGCCACAGCTAACACGCTGCCCATGTGGTTCCACTaGATGCCTACTACGTACATGCCAGTGTCAATCAAAACGGGATTT +
Preference number: 5 (lower is better)
Translates to: FWKPATANTLPMWFH*MPTTYMPVSIKTGF
Trigger: AAATCCCGTTTTGATTGACACTGGCATGTACGTAGTAGGCATCCAGTGGAACCACATGGGCAGCGTGTTAGCTGTGGCAGGCTTCCAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281405.9
ENST00000345530.8
ENST00000414212.5
ENST00000445063.5
CDS CCA 90 bp CAAACGGAGTGTAAAACTGCACAATGTTCACATCTTTGTCCTGCATaGCTGCCTTCTGGAAGCCTGCCACAGCTAACACGCTGCCCATGT +
Preference number: 5 (lower is better)
Translates to: QTECKTAQCSHLCPA*LPSGSLPQLTRCPC
Trigger: ACATGGGCAGCGTGTTAGCTGTGGCAGGCTTCCAGAAGGCAGCCATGCAGGACAAAGATGTGAACATTGTGCAGTTTTACACTCCGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281405.9
ENST00000345530.8
ENST00000414212.5
ENST00000445063.5
CDS-3UTR CAA 90 bp CTGTCTTCAGTGCAGTGTCCACACATCCCTCATAGAGCTGCCTCTGTGCAAGTAGACTCACTCAGTAGTTaGCCCAAGCGCTTCACAAAC +
Preference number: 5 (lower is better)
Translates to: LSSVQCPHIPHRAASVQVDSLSS*PKRFTN
Trigger: GTTTGTGAAGCGCTTGGGCAAACTACTGAGTGAGTC...TACTTGCACAGAGGCAGCTCTATGAGGGATGTGTGGACACTGCACTGAAGACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR CAA 90 bp GTCCTGCAGGAACCTTTCAGACAGGCAGAACTAATAAGTGTGCCATCCCTACAACTGTGGCAACGCATGTaGGCAGTTTCCCTTCTCCAC +
Preference number: 5 (lower is better)
Translates to: VLQEPFRQAELISVPSLQLWQRM*AVSLLH
Trigger: GTGGAGAAGGGAAACTGCCAACATGCGTTGCCACAG...TTGTAGGGATGGCACACTTATTAGTTCTGCCTGTCTGAAAGGTTCCTGCAGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CAA 90 bp GCCTCAGGCACATTTCATCTGATTGAGTCATCTGGCTCAAGCGGCCACTCTGGTCAGTTATGGCACAAATaGGATCCCTTGTGCCTTGAA +
Preference number: 5 (lower is better)
Translates to: ASGTFHLIESSGSSGHSGQLWHK*DPLCLE
Trigger: TTCAAGGCACAAGGGATCCAATTTGTGCCATAACTG...ACCAGAGTGGCCGCTTGAGCCAGATGACTCAATCAGATGAAATGTGCCTGAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CAA 90 bp GCCTCAGGCACATTTCATCTGATTGAGTCATCTGGCTCAAGCGGCCACTCTGGTCACAAACTTAATGCCTaGGTAATCTTTGCAGCGCAC +
Preference number: 5 (lower is better)
Translates to: ASGTFHLIESSGSSGHSGHKLNA*VIFAAH
Trigger: GTGCGCTGCAAAGATTACCAAGGCATTAAGTTTGTG...ACCAGAGTGGCCGCTTGAGCCAGATGACTCAATCAGATGAAATGTGCCTGAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CAA 90 bp CTGCCTCTGTGCAAGTATAAAGAAGTGGTAAGCCTCTGCCCCTCTCCATGCATTTCTCCAATGGCATTGTaGGCTTGTTCCAGGAGACTG +
Preference number: 5 (lower is better)
Translates to: LPLCKYKEVVSLCPSPCISPMAL*ACSRRL
Trigger: CAGTCTCCTGGAACAAGCCAACAATGCCATTGGAGA...AATGCATGGAGAGGGGCAGAGGCTTACCACTTCTTTATACTTGCACAGAGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR CAA 90 bp GCCTCAGGCACATTTCATCTGATTGAGTCATCTGGCTCAAGCGGCCACTCTGGTGCTTTGTTCCATTGGTaGAGATGTACGCAGGTATCT +
Preference number: 5 (lower is better)
Translates to: ASGTFHLIESSGSSGHSGALFHW*RCTQVS
Trigger: AGATACCTGCGTACATCTCAACCAATGGAACAAAGC...ACCAGAGTGGCCGCTTGAGCCAGATGACTCAATCAGATGAAATGTGCCTGAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CAA 90 bp GCCTCAGGCACATTTCATCTGATTGAGTCATCTGGCTCAAGCGGCCACTCTGGTAACAGCTTTGTTCCATaGGTTGAGATGTACGCAGGT +
Preference number: 5 (lower is better)
Translates to: ASGTFHLIESSGSSGHSGNSFVP*VEMYAG
Trigger: ACCTGCGTACATCTCAACCAATGGAACAAAGCTGTT...ACCAGAGTGGCCGCTTGAGCCAGATGACTCAATCAGATGAAATGTGCCTGAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CAA 90 bp CTTGCTGTCCCGTACTGTCCGTTACTCGAGCATCCAAGTCAAAGAAAGTCAGAAGCAAGGACACCGTGTTaGCATACACTGCACATCCAG +
Preference number: 5 (lower is better)
Translates to: LAVPYCPLLEHPSQRKSEARTPC*HTLHIQ
Trigger: CTGGATGTGCAGTGTATGCAAACACGGTGTCCTTGC...TTCTGACTTTCTTTGACTTGGATGCTCGAGTAACGGACAGTACGGGACAGCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445063.5
CDS-3UTR CAA 90 bp TTGAACAAGTCCCAAAGGCTCTGCTGGCGCATGCGCAGAGTGCTAGCAGAGAGTATTCCATGTTACAACTaGAACAGAACCACTATGACC +
Preference number: 5 (lower is better)
Translates to: LNKSQRLCWRMRRVLAESIPCYN*NRTTMT
Trigger: GGTCATAGTGGTTCTGTTCAAGTTGTAACATGGAAT...ACTCTCTGCTAGCACTCTGCGCATGCGCCAGCAGAGCCTTTGGGACTTGTTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414212.5
CDS-3UTR CAA 90 bp TCTGCATCACCAGATCCAGTTTTCAGGAGCTGGAGTACTCTAAACCAATCCCCCACAATGTTCACATCTTaGTCCTGCATGGCTGCCTTC +
Preference number: 5 (lower is better)
Translates to: SASPDPVFRSWSTLNQSPTMFTS*SCMAAF
Trigger: GAAGGCAGCCATGCAGGACAAAGATGTGAACATTGT...GGGGGATTGGTTTAGAGTACTCCAGCTCCTGAAAACTGGATCTGGTGATGCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445063.5
CDS-3UTR CAA 90 bp CCACTGGACTATGGCATAAGGGGCAGAAGCTGTAGTGGCTTATTTCCTGAGCAAGCAAGACGGCTAGAGTaGCAATTCAAGGATAACTGG +
Preference number: 5 (lower is better)
Translates to: PLDYGIRGRSCSGLFPEQARRLE*QFKDNW
Trigger: CCAGTTATCCTTGAATTGCAACTCTAGCCGTCTTGC...TTGCTCAGGAAATAAGCCACTACAGCTTCTGCCCCTTATGCCATAGTCCAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR CAA 90 bp GCCTCAGGCACATTTCATCTGATTGAGTCATCTGGCTCAAGCGGCCACTCTGGTAAATCAGGATTATCTTaGGCCCACTTCATATCCCAG +
Preference number: 5 (lower is better)
Translates to: ASGTFHLIESSGSSGHSGKSGLS*AHFISQ
Trigger: CTGGGATATGAAGTGGGCCAAAGATAATCCTGATTT...ACCAGAGTGGCCGCTTGAGCCAGATGACTCAATCAGATGAAATGTGCCTGAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CAA 90 bp GGCAGAAGCTGTAGTGGCTTATTTCCTGAGCAAGGACACCGTGTTTGCATACACAATGGCATTGTTGGCTaGTTCCAGGAGACTGTCATC +
Preference number: 5 (lower is better)
Translates to: GRSCSGLFPEQGHRVCIHNGIVG*FQETVI
Trigger: GATGACAGTCTCCTGGAACAAGCCAACAATGCCATT...GTGTATGCAAACACGGTGTCCTTGCTCAGGAAATAAGCCACTACAGCTTCTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR CAA 90 bp CCACTGGACTATGGCATAAGGGGCAGAAGCTGTAGTGGCTTATTTCCTGAGCAAAATGGCATTGTTGGCTaGTTCCAGGAGACTGTCATC +
Preference number: 5 (lower is better)
Translates to: PLDYGIRGRSCSGLFPEQNGIVG*FQETVI
Trigger: GATGACAGTCTCCTGGAACAAGCCAACAATGCCATT...TTGCTCAGGAAATAAGCCACTACAGCTTCTGCCCCTTATGCCATAGTCCAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR CAA 90 bp CAGTGCAGTGTCCACACATCCCTCATAGAGCTGCCTCTGTGCAAGTATAAAGAATCTCCAATGGCATTGTaGGCTTGTTCCAGGAGACTG +
Preference number: 5 (lower is better)
Translates to: QCSVHTSLIELPLCKYKESPMAL*ACSRRL
Trigger: CAGTCTCCTGGAACAAGCCAACAATGCCATTGGAGA...TTCTTTATACTTGCACAGAGGCAGCTCTATGAGGGATGTGTGGACACTGCACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR CAA 90 bp CTGTCTTCAGTGCAGTGTCCACACATCCCTCATAGAGCTGCCTCTGTGCAAGTAAACAGCTTTGTTCCATaGGTTGAGATGTACGCAGGT +
Preference number: 5 (lower is better)
Translates to: LSSVQCPHIPHRAASVQVNSFVP*VEMYAG
Trigger: ACCTGCGTACATCTCAACCAATGGAACAAAGCTGTT...TACTTGCACAGAGGCAGCTCTATGAGGGATGTGTGGACACTGCACTGAAGACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414212.5
CDS-3UTR CAA 90 bp GCCTCAGGCACATTTCATCTGATTGAGTCATCTGGCTCAAGCGGCCACTCTGGTGCCAATTCAACAGCTTaGTTCCATTGGTTGAGATGT +
Preference number: 5 (lower is better)
Translates to: ASGTFHLIESSGSSGHSGANSTA*FHWLRC
Trigger: ACATCTCAACCAATGGAACAAAGCTGTTGAATTGGC...ACCAGAGTGGCCGCTTGAGCCAGATGACTCAATCAGATGAAATGTGCCTGAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CAA 90 bp GTGGCCTCTGAACTTTTTCCTTTAACTTTTCCTCGCTGGGCATTCTTCATCTGTCTGTGGCAACGCATGTaGGCAGTTTCCCTTCTCCAC +
Preference number: 5 (lower is better)
Translates to: VASELFPLTFPRWAFFICLWQRM*AVSLLH
Trigger: GTGGAGAAGGGAAACTGCCAACATGCGTTGCCACAG...ACAGATGAAGAATGCCCAGCGAGGAAAAGTTAAAGGAAAAAGTTCAGAGGCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR CAA 90 bp AGGTGTTGCGGTCTTTCCACTCCACTGGCACGTTACACTAACAGTGTTAATCTAGCAAGGACACCGTGTTaGCATACACTGCACATCCAG +
Preference number: 5 (lower is better)
Translates to: RCCGLSTPLARYTNSVNLARTPC*HTLHIQ
Trigger: CTGGATGTGCAGTGTATGCAAACACGGTGTCCTTGC...TAGATTAACACTGTTAGTGTAACGTGCCAGTGGAGTGGAAAGACCGCAACACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CAA 90 bp GTCCTGCAGGAACCTTTCAGACAGGCAGAACTAATAAGTGTGCCATCCCTACAAGCCCACCACACCACTTaGAAACATGTAATGAAGGGC +
Preference number: 5 (lower is better)
Translates to: VLQEPFRQAELISVPSLQAHHTT*KHVMKG
Trigger: GCCCTTCATTACATGTTTCAAAGTGGTGTGGTGGGC...TTGTAGGGATGGCACACTTATTAGTTCTGCCTGTCTGAAAGGTTCCTGCAGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CAA 90 bp GCCTCAGGCACATTTCATCTGATTGAGTCATCTGGCTCAAGCGGCCACTCTGGTCATCATTTCAATATTTaGGCCCACCACACCACTTTG +
Preference number: 5 (lower is better)
Translates to: ASGTFHLIESSGSSGHSGHHFNI*AHHTTL
Trigger: CAAAGTGGTGTGGTGGGCCAAAATATTGAAATGATG...ACCAGAGTGGCCGCTTGAGCCAGATGACTCAATCAGATGAAATGTGCCTGAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CAA 90 bp GCCTCAGGCACATTTCATCTGATTGAGTCATCTGGCTCAAGCGGCCACTCTGGTGAACTAGTACAAACGTaGCACCAAATGTCTCCATCT +
Preference number: 5 (lower is better)
Translates to: ASGTFHLIESSGSSGHSGELVQT*HQMSPS
Trigger: AGATGGAGACATTTGGTGCAACGTTTGTACTAGTTC...ACCAGAGTGGCCGCTTGAGCCAGATGACTCAATCAGATGAAATGTGCCTGAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345530.8
CDS GCA 90 bp CTAACACGCTGCCCATGTGGTTCCACTGGATGCCTACTACGTACATaGCAGTGTCAATCAAAACGGGATTTTGGTCATTCTCATGTCTCA +
Preference number: 5 (lower is better)
Translates to: LTRCPCGSTGCLLRT*QCQSKRDFGHSHVS
Trigger: TGAGACATGAGAATGACCAAAATCCCGTTTTGATTGACACTGGCATGTACGTAGTAGGCATCCAGTGGAACCACATGGGCAGCGTGTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281405.9
ENST00000345530.8
ENST00000414212.5
ENST00000445063.5
CDS-3UTR CAA 90 bp GTCCACACATCCCTCATAGAGCTGCCTCTGTGCAAGTATAAAGAAGTGGTAAGCGCATGCTATGAACCCTaGTTCCTTGTTCCAGGATAC +
Preference number: 5 (lower is better)
Translates to: VHTSLIELPLCKYKEVVSACYEP*FLVPGY
Trigger: GTATCCTGGAACAAGGAACAAGGGTTCATAGCATGC...GCTTACCACTTCTTTATACTTGCACAGAGGCAGCTCTATGAGGGATGTGTGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414212.5
CDS-3UTR CAA 90 bp AGCCTCTGCCCCTCTCCATGCATTATCTGTGAAACGATCTGTTGTAGACAGAACCAAGCACACCATCCATaGATCCAGAAGGGGTATCAT +
Preference number: 5 (lower is better)
Translates to: SLCPSPCIICETICCRQNQAHHP*IQKGYH
Trigger: ATGATACCCCTTCTGGATCAATGGATGGTGTGCTTG...GTTCTGTCTACAACAGATCGTTTCACAGATAATGCATGGAGAGGGGCAGAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR CAA 90 bp TGCAGTGTCCACACATCCCTCATAGAGCTGCCTCTGTGCAAGTATAAAGAAGTGCAAGCACACCATCCATaGATCCAGAAGGGGTATCAT +
Preference number: 5 (lower is better)
Translates to: CSVHTSLIELPLCKYKEVQAHHP*IQKGYH
Trigger: ATGATACCCCTTCTGGATCAATGGATGGTGTGCTTG...CACTTCTTTATACTTGCACAGAGGCAGCTCTATGAGGGATGTGTGGACACTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR CAA 90 bp CTGCCTCTGTGCAAGTATAAAGAAGTGGTAAGCCTCTGCCCCTCTCCATGCATTCAGTTATGGCACAAATaGGATCCCTTGTGCCTTGAA +
Preference number: 5 (lower is better)
Translates to: LPLCKYKEVVSLCPSPCIQLWHK*DPLCLE
Trigger: TTCAAGGCACAAGGGATCCAATTTGTGCCATAACTG...AATGCATGGAGAGGGGCAGAGGCTTACCACTTCTTTATACTTGCACAGAGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR CAA 90 bp GTGGCCTCTGAACTTTTTCCTTTAACTTTTCCTCGCTGGGCATTCTTCATCTGTCAACTCTCCAACTACTaGCTGTCCCGTACTGTCCGT +
Preference number: 5 (lower is better)
Translates to: VASELFPLTFPRWAFFICQLSNY*LSRTVR
Trigger: ACGGACAGTACGGGACAGCAAGTAGTTGGAGAGTTG...ACAGATGAAGAATGCCCAGCGAGGAAAAGTTAAAGGAAAAAGTTCAGAGGCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR CAA 90 bp AGGTGTTGCGGTCTTTCCACTCCACTGGCACGTTACACTAACAGTGTTAATCTAGACTCACTCAGTAGTTaGCCCAAGCGCTTCACAAAC +
Preference number: 5 (lower is better)
Translates to: RCCGLSTPLARYTNSVNLDSLSS*PKRFTN
Trigger: GTTTGTGAAGCGCTTGGGCAAACTACTGAGTGAGTC...TAGATTAACACTGTTAGTGTAACGTGCCAGTGGAGTGGAAAGACCGCAACACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CAA 90 bp TTGATACTCAGTGATTGGGCTTCCTGTGGCAACGCATGTTGGCAGTTTCCCTTCGCTTTGTTCCATTGGTaGAGATGTACGCAGGTATCT +
Preference number: 5 (lower is better)
Translates to: LILSDWASCGNACWQFPFALFHW*RCTQVS
Trigger: AGATACCTGCGTACATCTCAACCAATGGAACAAAGC...GAAGGGAAACTGCCAACATGCGTTGCCACAGGAAGCCCAATCACTGAGTATCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414212.5
CDS-3UTR CAA 90 bp GCCTCAGGCACATTTCATCTGATTGAGTCATCTGGCTCAAGCGGCCACTCTGGTGTTTACTTCCTTTCTTaGCCTCTTCATCTGCAATCT +
Preference number: 5 (lower is better)
Translates to: ASGTFHLIESSGSSGHSGVYFLS*PLHLQS
Trigger: AGATTGCAGATGAAGAGGCAAAGAAAGGAAGTAAAC...ACCAGAGTGGCCGCTTGAGCCAGATGACTCAATCAGATGAAATGTGCCTGAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CAA 90 bp TATTTCCTGAGCAAGGACACCGTGTTTGCATACACTGCACATCCAGAATTGATACTGTGGCAACGCATGTaGGCAGTTTCCCTTCTCCAC +
Preference number: 5 (lower is better)
Translates to: YFLSKDTVFAYTAHPELILWQRM*AVSLLH
Trigger: GTGGAGAAGGGAAACTGCCAACATGCGTTGCCACAG...TATCAATTCTGGATGTGCAGTGTATGCAAACACGGTGTCCTTGCTCAGGAAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS GCA 90 bp TGCCATCCACTGAACCAACTATCACAGCCCCATCTTCATATACAATaGAGATCTTCTGTCCGTCAGCATTCCAGCTCATACTGCGAACAA +
Preference number: 5 (lower is better)
Translates to: CHPLNQLSQPHLHIQ*RSSVRQHSSSYCEQ
Trigger: TTGTTCGCAGTATGAGCTGGAATGCTGACGGACAGAAGATCTGCATTGTATATGAAGATGGGGCTGTGATAGTTGGTTCAGTGGATGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281405.9
ENST00000345530.8
ENST00000414212.5
CDS-3UTR CAA 90 bp CTGTCTTCAGTGCAGTGTCCACACATCCCTCATAGAGCTGCCTCTGTGCAAGTATGCAGCTTCACGTTATaGGGAATGGAAATTTTCTTG +
Preference number: 5 (lower is better)
Translates to: LSSVQCPHIPHRAASVQVCSFTL*GMEIFL
Trigger: CAAGAAAATTTCCATTCCCAATAACGTGAAGCTGCA...TACTTGCACAGAGGCAGCTCTATGAGGGATGTGTGGACACTGCACTGAAGACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414212.5
CDS-3UTR CAA 90 bp GAGCTGTCTTCAGTGCAGTGTCCACACATCCCTCATAGAGCTGCCTCTGTGCAAAATCAAAACGGGATTTaGGTCATTCTCATGTCTCAT +
Preference number: 5 (lower is better)
Translates to: ELSSVQCPHIPHRAASVQNQNGI*VILMSH
Trigger: ATGAGACATGAGAATGACCAAAATCCCGTTTTGATT...TTGCACAGAGGCAGCTCTATGAGGGATGTGTGGACACTGCACTGAAGACAGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414212.5
CDS-3UTR CAA 90 bp AGGTGTTGCGGTCTTTCCACTCCACTGGCACGTTACACTAACAGTGTTAATCTAACAATGTTCACATCTTaGTCCTGCATGGCTGCCTTC +
Preference number: 5 (lower is better)
Translates to: RCCGLSTPLARYTNSVNLTMFTS*SCMAAF
Trigger: GAAGGCAGCCATGCAGGACAAAGATGTGAACATTGT...TAGATTAACACTGTTAGTGTAACGTGCCAGTGGAGTGGAAAGACCGCAACACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CAA 90 bp AACAGCTTTGTTCCATTGGTTGAGATGTACGCAGGTATCTACTGCTGCCTTTGGACAATGTTCACATCTTaGTCCTGCATGGCTGCCTTC +
Preference number: 5 (lower is better)
Translates to: NSFVPLVEMYAGIYCCLWTMFTS*SCMAAF
Trigger: GAAGGCAGCCATGCAGGACAAAGATGTGAACATTGT...CCAAAGGCAGCAGTAGATACCTGCGTACATCTCAACCAATGGAACAAAGCTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414212.5
CDS-3UTR CAA 90 bp CTGTCTTCAGTGCAGTGTCCACACATCCCTCATAGAGCTGCCTCTGTGCAAGTACATGGGTTTTGGTCATaGCAACAAACAATGGTACAA +
Preference number: 5 (lower is better)
Translates to: LSSVQCPHIPHRAASVQVHGFWS*QQTMVQ
Trigger: TTGTACCATTGTTTGTTGCAATGACCAAAACCCATG...TACTTGCACAGAGGCAGCTCTATGAGGGATGTGTGGACACTGCACTGAAGACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414212.5
CDS-3UTR CAA 90 bp TACACTGCACATCCAGAATTGATACTCAGTGATTGGGCTTCCTGTGGCAACGCACAGTTATGGCACAAATaGGATCCCTTGTGCCTTGAA +
Preference number: 5 (lower is better)
Translates to: YTAHPELILSDWASCGNAQLWHK*DPLCLE
Trigger: TTCAAGGCACAAGGGATCCAATTTGTGCCATAACTG...TGCGTTGCCACAGGAAGCCCAATCACTGAGTATCAATTCTGGATGTGCAGTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR CAA 90 bp AGGTGTTGCGGTCTTTCCACTCCACTGGCACGTTACACTAACAGTGTTAATCTAGCAAGACGGCTAGAGTaGCAATTCAAGGATAACTGG +
Preference number: 5 (lower is better)
Translates to: RCCGLSTPLARYTNSVNLARRLE*QFKDNW
Trigger: CCAGTTATCCTTGAATTGCAACTCTAGCCGTCTTGC...TAGATTAACACTGTTAGTGTAACGTGCCAGTGGAGTGGAAAGACCGCAACACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CAA 90 bp GTCCACACATCCCTCATAGAGCTGCCTCTGTGCAAGTATAAAGAAGTGGTAAGCCACAAACTTAATGCCTaGGTAATCTTTGCAGCGCAC +
Preference number: 5 (lower is better)
Translates to: VHTSLIELPLCKYKEVVSHKLNA*VIFAAH
Trigger: GTGCGCTGCAAAGATTACCAAGGCATTAAGTTTGTG...GCTTACCACTTCTTTATACTTGCACAGAGGCAGCTCTATGAGGGATGTGTGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR CAA 90 bp CCTGAGCAAGGACACCGTGTTTGCATACACTGCACATCCAGAATTGATACTCAGCACAAACTTAATGCCTaGGTAATCTTTGCAGCGCAC +
Preference number: 5 (lower is better)
Translates to: PEQGHRVCIHCTSRIDTQHKLNA*VIFAAH
Trigger: GTGCGCTGCAAAGATTACCAAGGCATTAAGTTTGTG...CTGAGTATCAATTCTGGATGTGCAGTGTATGCAAACACGGTGTCCTTGCTCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR CAA 90 bp CCACTGGACTATGGCATAAGGGGCAGAAGCTGTAGTGGCTTATTTCCTGAGCAAAGCATTCAACCACTTTaGTCGATCAGCAAAGTAGTC +
Preference number: 5 (lower is better)
Translates to: PLDYGIRGRSCSGLFPEQSIQPL*SISKVV
Trigger: GACTACTTTGCTGATCGACAAAAGTGGTTGAATGCT...TTGCTCAGGAAATAAGCCACTACAGCTTCTGCCCCTTATGCCATAGTCCAGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR CAA 90 bp GCCTCAGGCACATTTCATCTGATTGAGTCATCTGGCTCAAGCGGCCACTCTGGTATTTCTGGAAGTAACTaGTGGTTTTCTGGAAGTGAA +
Preference number: 5 (lower is better)
Translates to: ASGTFHLIESSGSSGHSGISGSN*WFSGSE
Trigger: TTCACTTCCAGAAAACCACAAGTTACTTCCAGAAAT...ACCAGAGTGGCCGCTTGAGCCAGATGACTCAATCAGATGAAATGTGCCTGAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CAA 90 bp TACACTGCACATCCAGAATTGATACTCAGTGATTGGGCTTCCTGTGGCAACGCAACTGCACATCCAGAATaGATACTCAGTGATTGGGCT +
Preference number: 5 (lower is better)
Translates to: YTAHPELILSDWASCGNATAHPE*ILSDWA
Trigger: AGCCCAATCACTGAGTATCAATTCTGGATGTGCAGT...TGCGTTGCCACAGGAAGCCCAATCACTGAGTATCAATTCTGGATGTGCAGTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR CAA 90 bp GTCCACACATCCCTCATAGAGCTGCCTCTGTGCAAGTATAAAGAAGTGGTAAGCACTGCACATCCAGAATaGATACTCAGTGATTGGGCT +
Preference number: 5 (lower is better)
Translates to: VHTSLIELPLCKYKEVVSTAHPE*ILSDWA
Trigger: AGCCCAATCACTGAGTATCAATTCTGGATGTGCAGT...GCTTACCACTTCTTTATACTTGCACAGAGGCAGCTCTATGAGGGATGTGTGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR CAA 90 bp GGCAGAAGCTGTAGTGGCTTATTTCCTGAGCAAGGACACCGTGTTTGCATACACGAACTAGTACAAACGTaGCACCAAATGTCTCCATCT +
Preference number: 5 (lower is better)
Translates to: GRSCSGLFPEQGHRVCIHELVQT*HQMSPS
Trigger: AGATGGAGACATTTGGTGCAACGTTTGTACTAGTTC...GTGTATGCAAACACGGTGTCCTTGCTCAGGAAATAAGCCACTACAGCTTCTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414212.5
CDS-3UTR CAA 90 bp TGCAGTGTCCACACATCCCTCATAGAGCTGCCTCTGTGCAAGTATAAAGAAGTGCTTTGCCACACGATATaGCCAGGTATAAAATGCTTC +
Preference number: 5 (lower is better)
Translates to: CSVHTSLIELPLCKYKEVLCHTI*PGIKCF
Trigger: GAAGCATTTTATACCTGGCAATATCGTGTGGCAAAG...CACTTCTTTATACTTGCACAGAGGCAGCTCTATGAGGGATGTGTGGACACTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR CAA 90 bp CTTGCTGTCCCGTACTGTCCGTTACTCGAGCATCCAAGTCAAAGAAAGTCAGAACTTTGCCACACGATATaGCCAGGTATAAAATGCTTC +
Preference number: 5 (lower is better)
Translates to: LAVPYCPLLEHPSQRKSELCHTI*PGIKCF
Trigger: GAAGCATTTTATACCTGGCAATATCGTGTGGCAAAG...TTCTGACTTTCTTTGACTTGGATGCTCGAGTAACGGACAGTACGGGACAGCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445063.5
CDS-3UTR CAA 90 bp GCCCCTCTCCATGCATTATCTGTGAAACGATCTGTTGTAGACAGAACTTCTTCTGCAAGACGGCTAGAGTaGCAATTCAAGGATAACTGG +
Preference number: 5 (lower is better)
Translates to: APLHALSVKRSVVDRTSSARRLE*QFKDNW
Trigger: CCAGTTATCCTTGAATTGCAACTCTAGCCGTCTTGC...AGAAGAAGTTCTGTCTACAACAGATCGTTTCACAGATAATGCATGGAGAGGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR CAA 90 bp AAGTCTGAGGAGTCAACAGGTGATTCTAGAACTAAAGCAAATGAAAGTGCAACCCAACTCTCCAACTACTaGCTGTCCCGTACTGTCCGT +
Preference number: 5 (lower is better)
Translates to: KSEESTGDSRTKANESATQLSNY*LSRTVR
Trigger: ACGGACAGTACGGGACAGCAAGTAGTTGGAGAGTTG...GGTTGCACTTTCATTTGCTTTAGTTCTAGAATCACCTGTTGACTCCTCAGACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CAA 90 bp CAGTGCAGTGTCCACACATCCCTCATAGAGCTGCCTCTGTGCAAGTATAAAGAAAAATCAGGATTATCTTaGGCCCACTTCATATCCCAG +
Preference number: 5 (lower is better)
Translates to: QCSVHTSLIELPLCKYKEKSGLS*AHFISQ
Trigger: CTGGGATATGAAGTGGGCCAAAGATAATCCTGATTT...TTCTTTATACTTGCACAGAGGCAGCTCTATGAGGGATGTGTGGACACTGCACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR CAA 90 bp TGCTGTCCCGTACTGTCCGTTACTCGAGCATCCAAGTCAAAGAAAGTCAGAACTAAATCAGGATTATCTTaGGCCCACTTCATATCCCAG +
Preference number: 5 (lower is better)
Translates to: CCPVLSVTRASKSKKVRTKSGLS*AHFISQ
Trigger: CTGGGATATGAAGTGGGCCAAAGATAATCCTGATTT...AGTTCTGACTTTCTTTGACTTGGATGCTCGAGTAACGGACAGTACGGGACAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445063.5
CDS-3UTR CAA 90 bp AATTCCAACCTTCTCAATCAGTGCTCGGCTATCTCGCAGAGACCGAATCTCAAACTTCAGCCTGTTTCATaGACTCACTCAGTAGTTTGC +
Preference number: 5 (lower is better)
Translates to: NSNLLNQCSAISQRPNLKLQPVS*THSVVC
Trigger: GCAAACTACTGAGTGAGTCAATGAAACAGGCTGAAG...TTTGAGATTCGGTCTCTGCGAGATAGCCGAGCACTGATTGAGAAGGTTGGAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445063.5
CDS-3UTR CAA 90 bp GTCCTGCAGGAACCTTTCAGACAGGCAGAACTAATAAGTGTGCCATCCCTACAAAGCATTCAACCACTTTaGTCGATCAGCAAAGTAGTC +
Preference number: 5 (lower is better)
Translates to: VLQEPFRQAELISVPSLQSIQPL*SISKVV
Trigger: GACTACTTTGCTGATCGACAAAAGTGGTTGAATGCT...TTGTAGGGATGGCACACTTATTAGTTCTGCCTGTCTGAAAGGTTCCTGCAGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CAA 90 bp TTTTATTTGGTTTATAAGGCTTTCTGTTCCATGACCTCTGGAATAGCTTGCGAGCTGTGGCAACGCATGTaGGCAGTTTCCCTTCTCCAC +
Preference number: 5 (lower is better)
Translates to: FYLVYKAFCSMTSGIACELWQRM*AVSLLH
Trigger: GTGGAGAAGGGAAACTGCCAACATGCGTTGCCACAG...CTCGCAAGCTATTCCAGAGGTCATGGAACAGAAAGCCTTATAAACCAAATAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CAA 90 bp AAGTCTGAGGAGTCAACAGGTGATTCTAGAACTAAAGCAAATGAAAGTGCAACCGCAAGGACACCGTGTTaGCATACACTGCACATCCAG +
Preference number: 5 (lower is better)
Translates to: KSEESTGDSRTKANESATARTPC*HTLHIQ
Trigger: CTGGATGTGCAGTGTATGCAAACACGGTGTCCTTGC...GGTTGCACTTTCATTTGCTTTAGTTCTAGAATCACCTGTTGACTCCTCAGACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CAA 90 bp GTCCTGCAGGAACCTTTCAGACAGGCAGAACTAATAAGTGTGCCATCCCTACAACATCATTTCAATATTTaGGCCCACCACACCACTTTG +
Preference number: 5 (lower is better)
Translates to: VLQEPFRQAELISVPSLQHHFNI*AHHTTL
Trigger: CAAAGTGGTGTGGTGGGCCAAAATATTGAAATGATG...TTGTAGGGATGGCACACTTATTAGTTCTGCCTGTCTGAAAGGTTCCTGCAGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS GCA 90 bp CAATGCTGTGAGCTTCTTTGCCACACGATATTGCCAGGTATAAAATaGTTCTTTCGAGGCTGCTATCACATGGGTTTTGGTCATTGCAAC +
Preference number: 5 (lower is better)
Translates to: QCCELLCHTILPGIK*FFRGCYHMGFGHCN
Trigger: GTTGCAATGACCAAAACCCATGTGATAGCAGCCTCGAAAGAAGCATTTTATACCTGGCAATATCGTGTGGCAAAGAAGCTCACAGCATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281405.9
ENST00000345530.8
ENST00000414212.5
ENST00000445063.5
CDS-3UTR CAA 90 bp AAGTCTGAGGAGTCAACAGGTGATTCTAGAACTAAAGCAAATGAAAGTGCAACCCAAGGCCCCTCAATTTaGCATCATCTGTCTGCGTCT +
Preference number: 5 (lower is better)
Translates to: KSEESTGDSRTKANESATQGPSI*HHLSAS
Trigger: AGACGCAGACAGATGATGCAAAATTGAGGGGCCTTG...GGTTGCACTTTCATTTGCTTTAGTTCTAGAATCACCTGTTGACTCCTCAGACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CAA 90 bp TGCAGTGTCCACACATCCCTCATAGAGCTGCCTCTGTGCAAGTATAAAGAAGTGTGGATCCCTTGTGCCTaGAATGGTTTTACTATAATC +
Preference number: 5 (lower is better)
Translates to: CSVHTSLIELPLCKYKEVWIPCA*NGFTII
Trigger: GATTATAGTAAAACCATTCAAGGCACAAGGGATCCA...CACTTCTTTATACTTGCACAGAGGCAGCTCTATGAGGGATGTGTGGACACTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR CAA 90 bp CATCTAGGCTCTAAATCTCTTCTCATAGCTCACTATTCCCAATCTGCAACATGCGCAAGACGGCTAGAGTaGCAATTCAAGGATAACTGG +
Preference number: 5 (lower is better)
Translates to: HLGSKSLLIAHYSQSATCARRLE*QFKDNW
Trigger: CCAGTTATCCTTGAATTGCAACTCTAGCCGTCTTGC...GCATGTTGCAGATTGGGAATAGTGAGCTATGAGAAGAGATTTAGAGCCTAGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CAA 90 bp CATCTAGGCTCTAAATCTCTTCTCATAGCTCACTATTCCCAATCTGCAACATGCAATGGCATTGTTGGCTaGTTCCAGGAGACTGTCATC +
Preference number: 5 (lower is better)
Translates to: HLGSKSLLIAHYSQSATCNGIVG*FQETVI
Trigger: GATGACAGTCTCCTGGAACAAGCCAACAATGCCATT...GCATGTTGCAGATTGGGAATAGTGAGCTATGAGAAGAGATTTAGAGCCTAGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CAA 90 bp AGGTGTTGCGGTCTTTCCACTCCACTGGCACGTTACACTAACAGTGTTAATCTATTCCTGGTTCCGTCCTaGTACATAATATTGTACAGC +
Preference number: 5 (lower is better)
Translates to: RCCGLSTPLARYTNSVNLFLVPS*YIILYS
Trigger: GCTGTACAATATTATGTACAAGGACGGAACCAGGAA...TAGATTAACACTGTTAGTGTAACGTGCCAGTGGAGTGGAAAGACCGCAACACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CAA 90 bp CATCTAGGCTCTAAATCTCTTCTCATAGCTCACTATTCCCAATCTGCAACATGCTCTCTAAATTCAACTTaGCCCCACTCCCATGCTTCC +
Preference number: 5 (lower is better)
Translates to: HLGSKSLLIAHYSQSATCSLNST*PHSHAS
Trigger: GGAAGCATGGGAGTGGGGCAAAGTTGAATTTAGAGA...GCATGTTGCAGATTGGGAATAGTGAGCTATGAGAAGAGATTTAGAGCCTAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CAA 90 bp GTCCTGCAGGAACCTTTCAGACAGGCAGAACTAATAAGTGTGCCATCCCTACAAACATTACTGTGTTGCTaGTTAGGCACACTGCTTATT +
Preference number: 5 (lower is better)
Translates to: VLQEPFRQAELISVPSLQTLLCC*LGTLLI
Trigger: AATAAGCAGTGTGCCTAACAAGCAACACAGTAATGT...TTGTAGGGATGGCACACTTATTAGTTCTGCCTGTCTGAAAGGTTCCTGCAGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CAA 90 bp TTCCTGAGCAAGGACACCGTGTTTGCATACACTGCACATCCAGAATTGATACTCCCTACTGGAAGTAACTaGTGGTTTTCTGGAAGTGAA +
Preference number: 5 (lower is better)
Translates to: FLSKDTVFAYTAHPELILPTGSN*WFSGSE
Trigger: TTCACTTCCAGAAAACCACAAGTTACTTCCAGTAGG...GAGTATCAATTCTGGATGTGCAGTGTATGCAAACACGGTGTCCTTGCTCAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414212.5
CDS-3UTR CAA 90 bp TTCCTGAGCAAGGACACCGTGTTTGCATACACTGCACATCCAGAATTGATACTCCATGGGTTTTGGTCATaGCAACAAACAATGGTACTG +
Preference number: 5 (lower is better)
Translates to: FLSKDTVFAYTAHPELILHGFWS*QQTMVL
Trigger: CAGTACCATTGTTTGTTGCAATGACCAAAACCCATG...GAGTATCAATTCTGGATGTGCAGTGTATGCAAACACGGTGTCCTTGCTCAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445063.5
CDS TCA 90 bp GCAGATCTTCTGTCCGTCAGCATTCCAGCTCATACTGCGAACAACTaGTTTATTTCGATTGTTGATCATCTCCTCAATCCAAGAGCCTTT +
Preference number: 5 (lower is better)
Translates to: ADLLSVSIPAHTANN*FISIVDHLLNPRAF
Trigger: AAAGGCTCTTGGATTGAGGAGATGATCAACAATCGAAATAAATCAGTTGTTCGCAGTATGAGCTGGAATGCTGACGGACAGAAGATCTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281405.9
ENST00000345530.8
ENST00000414212.5
CDS-3UTR CAA 90 bp AAGTCTGAGGAGTCAACAGGTGATTCTAGAACTAAAGCAAATGAAAGTGCAACCGCATGCTATGAACCCTaGTTCCTTGTTCCAGGATAC +
Preference number: 5 (lower is better)
Translates to: KSEESTGDSRTKANESATACYEP*FLVPGY
Trigger: GTATCCTGGAACAAGGAACAAGGGTTCATAGCATGC...GGTTGCACTTTCATTTGCTTTAGTTCTAGAATCACCTGTTGACTCCTCAGACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CAA 90 bp CTTGTTAGGCACACTGCTTATTTGTACAGCTTTATCAGTCAGTTCCATCATTTCCAAGGCCCCTCAATTTaGCATCATCTGTCTGCGTCT +
Preference number: 5 (lower is better)
Translates to: LVRHTAYLYSFISQFHHFQGPSI*HHLSAS
Trigger: AGACGCAGACAGATGATGCAAAATTGAGGGGCCTTG...GAAATGATGGAACTGACTGATAAAGCTGTACAAATAAGCAGTGTGCCTAACAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CAA 90 bp AGGTGTTGCGGTCTTTCCACTCCACTGGCACGTTACACTAACAGTGTTAATCTAATTCCATGTTACAACTaGAACAGAACCACTATGACC +
Preference number: 5 (lower is better)
Translates to: RCCGLSTPLARYTNSVNLIPCYN*NRTTMT
Trigger: GGTCATAGTGGTTCTGTTCAAGTTGTAACATGGAAT...TAGATTAACACTGTTAGTGTAACGTGCCAGTGGAGTGGAAAGACCGCAACACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CAA 90 bp GCAGAAGCTGTAGTGGCTTATTTCCTGAGCAAGGACACCGTGTTTGCATACACTTGTGTATTTCCCCATTaGCCATTCCAAAAAGTAAGA +
Preference number: 5 (lower is better)
Translates to: AEAVVAYFLSKDTVFAYTCVFPH*PFQKVR
Trigger: TCTTACTTTTTGGAATGGCAAATGGGGAAATACACA...AGTGTATGCAAACACGGTGTCCTTGCTCAGGAAATAAGCCACTACAGCTTCTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR CAA 90 bp CAGTGCAGTGTCCACACATCCCTCATAGAGCTGCCTCTGTGCAAGTATAAAGAACATAAACTACAGTGTTaGAGCAATAACCCCACTTAT +
Preference number: 5 (lower is better)
Translates to: QCSVHTSLIELPLCKYKEHKLQC*SNNPTY
Trigger: ATAAGTGGGGTTATTGCTCAAACACTGTAGTTTATG...TTCTTTATACTTGCACAGAGGCAGCTCTATGAGGGATGTGTGGACACTGCACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR CAA 90 bp AGAGTAGATCTCCACAGGAGGGATGATGTCTTCATAGTCTTTCAGGTGAAGAGCACAATATCAATGTATTaGGGATCCAAGGGTGTACCA +
Preference number: 5 (lower is better)
Translates to: RVDLHRRDDVFIVFQVKSTISMY*GSKGVP
Trigger: TGGTACACCCTTGGATCCCAAATACATTGATATTGT...GCTCTTCACCTGAAAGACTATGAAGACATCATCCCTCCTGTGGAGATCTACTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414212.5
CDS-3UTR CAA 90 bp GCATACACTGCACATCCAGAATTGATACTCAGTGATTGGGCTTCCTGTGGCAACTTAGGTAATCCTTGTTaGGATGTTCTGGATCCTTTA +
Preference number: 5 (lower is better)
Translates to: AYTAHPELILSDWASCGNLGNPC*DVLDPL
Trigger: TAAAGGATCCAGAACATCCAAACAAGGATTACCTAA...GTTGCCACAGGAAGCCCAATCACTGAGTATCAATTCTGGATGTGCAGTGTATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR CAA 90 bp GTAAGCCTCTGCCCCTCTCCATGCATTATCTGTGAAACGATCTGTTGTAGACAGTTAGGTAATCCTTGTTaGGATGTTCTGGATCCTTTA +
Preference number: 5 (lower is better)
Translates to: VSLCPSPCIICETICCRQLGNPC*DVLDPL
Trigger: TAAAGGATCCAGAACATCCAAACAAGGATTACCTAA...CTGTCTACAACAGATCGTTTCACAGATAATGCATGGAGAGGGGCAGAGGCTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR CAA 90 bp CTTGTTAGGCACACTGCTTATTTGTACAGCTTTATCAGTCAGTTCCATCATTTCGACTCACTCAGTAGTTaGCCCAAGCGCTTCACAAAC +
Preference number: 5 (lower is better)
Translates to: LVRHTAYLYSFISQFHHFDSLSS*PKRFTN
Trigger: GTTTGTGAAGCGCTTGGGCAAACTACTGAGTGAGTC...GAAATGATGGAACTGACTGATAAAGCTGTACAAATAAGCAGTGTGCCTAACAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CAA 90 bp AAGTCTGAGGAGTCAACAGGTGATTCTAGAACTAAAGCAAATGAAAGTGCAACCAATGGCATTGTTGGCTaGTTCCAGGAGACTGTCATC +
Preference number: 5 (lower is better)
Translates to: KSEESTGDSRTKANESATNGIVG*FQETVI
Trigger: GATGACAGTCTCCTGGAACAAGCCAACAATGCCATT...GGTTGCACTTTCATTTGCTTTAGTTCTAGAATCACCTGTTGACTCCTCAGACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CAA 90 bp GCCCCTCTCCATGCATTATCTGTGAAACGATCTGTTGTAGACAGAACTTCTTCTAGCATTCAACCACTTTaGTCGATCAGCAAAGTAGTC +
Preference number: 5 (lower is better)
Translates to: APLHALSVKRSVVDRTSSSIQPL*SISKVV
Trigger: GACTACTTTGCTGATCGACAAAAGTGGTTGAATGCT...AGAAGAAGTTCTGTCTACAACAGATCGTTTCACAGATAATGCATGGAGAGGGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR CAA 90 bp TATAAAGAAGTGGTAAGCCTCTGCCCCTCTCCATGCATTATCTGTGAAACGATCTTCCTGGTTCCGTCCTaGTACATAATATTGTACAGC +
Preference number: 5 (lower is better)
Translates to: YKEVVSLCPSPCIICETIFLVPS*YIILYS
Trigger: GCTGTACAATATTATGTACAAGGACGGAACCAGGAA...GATCGTTTCACAGATAATGCATGGAGAGGGGCAGAGGCTTACCACTTCTTTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR CAA 90 bp CAGCATTCAACCACTTTTGTCGATCAGCAAAGTAGTCTCCAATGGCATTGTTGGTTCCTGGTTCCGTCCTaGTACATAATATTGTACAGC +
Preference number: 5 (lower is better)
Translates to: QHSTTFVDQQSSLQWHCWFLVPS*YIILYS
Trigger: GCTGTACAATATTATGTACAAGGACGGAACCAGGAA...CCAACAATGCCATTGGAGACTACTTTGCTGATCGACAAAAGTGGTTGAATGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445063.5
CDS-3UTR CAA 90 bp AGAGTAGATCTCCACAGGAGGGATGATGTCTTCATAGTCTTTCAGGTGAAGAGCTACTGCTGCCTTTGGTaGACTACATTTCAAAAATGC +
Preference number: 5 (lower is better)
Translates to: RVDLHRRDDVFIVFQVKSYCCLW*TTFQKC
Trigger: GCATTTTTGAAATGTAGTCAACCAAAGGCAGCAGTA...GCTCTTCACCTGAAAGACTATGAAGACATCATCCCTCCTGTGGAGATCTACTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414212.5
CDS-3UTR CAA 90 bp CATCTAGGCTCTAAATCTCTTCTCATAGCTCACTATTCCCAATCTGCAACATGCAACAGCTTTGTTCCATaGGTTGAGATGTACGCAGGT +
Preference number: 5 (lower is better)
Translates to: HLGSKSLLIAHYSQSATCNSFVP*VEMYAG
Trigger: ACCTGCGTACATCTCAACCAATGGAACAAAGCTGTT...GCATGTTGCAGATTGGGAATAGTGAGCTATGAGAAGAGATTTAGAGCCTAGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CAA 90 bp CTGTGCAAGTATAAAGAAGTGGTAAGCCTCTGCCCCTCTCCATGCATTATCTGTGTTTACTTCCTTTCTTaGCCTCTTCATCTGCAATCT +
Preference number: 5 (lower is better)
Translates to: LCKYKEVVSLCPSPCIICVYFLS*PLHLQS
Trigger: AGATTGCAGATGAAGAGGCAAAGAAAGGAAGTAAAC...ACAGATAATGCATGGAGAGGGGCAGAGGCTTACCACTTCTTTATACTTGCACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414212.5
CDS-3UTR CAA 90 bp AGGTGTTGCGGTCTTTCCACTCCACTGGCACGTTACACTAACAGTGTTAATCTAGCGTATCTCTATGTATaGCCTCTACTATATGTAAGC +
Preference number: 5 (lower is better)
Translates to: RCCGLSTPLARYTNSVNLAYLYV*PLLYVS
Trigger: GCTTACATATAGTAGAGGCAATACATAGAGATACGC...TAGATTAACACTGTTAGTGTAACGTGCCAGTGGAGTGGAAAGACCGCAACACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CAA 90 bp GTCCTGCAGGAACCTTTCAGACAGGCAGAACTAATAAGTGTGCCATCCCTACAAAGTGTTAATCTATCATaGCTTTCTCCTTGTTCCTCA +
Preference number: 5 (lower is better)
Translates to: VLQEPFRQAELISVPSLQSVNLS*LSPCSS
Trigger: TGAGGAACAAGGAGAAAGCAATGATAGATTAACACT...TTGTAGGGATGGCACACTTATTAGTTCTGCCTGTCTGAAAGGTTCCTGCAGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CAA 90 bp GTCCACACATCCCTCATAGAGCTGCCTCTGTGCAAGTATAAAGAAGTGGTAAGCAACTCTGACAAACATTaGTGCTATTTCCTACTGGAA +
Preference number: 5 (lower is better)
Translates to: VHTSLIELPLCKYKEVVSNSDKH*CYFLLE
Trigger: TTCCAGTAGGAAATAGCACAAATGTTTGTCAGAGTT...GCTTACCACTTCTTTATACTTGCACAGAGGCAGCTCTATGAGGGATGTGTGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414212.5
CDS-3UTR CAA 90 bp ACCTGCCGAAGTAGCCAACAACTTCAGCCTGTTTCATTGACTCACTCAGTAGTTCCTCTTCATCTGCAATaGGAAGTAACTTGTGGTTTT +
Preference number: 5 (lower is better)
Translates to: TCRSSQQLQPVSLTHSVVPLHLQ*EVTCGF
Trigger: AAAACCACAAGTTACTTCCAATTGCAGATGAAGAGG...AACTACTGAGTGAGTCAATGAAACAGGCTGAAGTTGTTGGCTACTTCGGCAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445063.5
CDS-3UTR CAA 90 bp TTCCTGAGCAAGGACACCGTGTTTGCATACACTGCACATCCAGAATTGATACTCGTTTACTTCCTTTCTTaGCCTCTTCATCTGCAATTG +
Preference number: 5 (lower is better)
Translates to: FLSKDTVFAYTAHPELILVYFLS*PLHLQL
Trigger: CAATTGCAGATGAAGAGGCAAAGAAAGGAAGTAAAC...GAGTATCAATTCTGGATGTGCAGTGTATGCAAACACGGTGTCCTTGCTCAGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445063.5
CDS TCA 90 bp TTCCATTGGTTGAGATGTACGCAGGTATCTACTGCTGCCTTTGGTTaGCTACATTTCAAAAATGCAGTCACTGCTTGTTCACACATTCCA +
Preference number: 5 (lower is better)
Translates to: FHWLRCTQVSTAAFG*LHFKNAVTACSHIP
Trigger: TGGAATGTGTGAACAAGCAGTGACTGCATTTTTGAAATGTAGTCAACCAAAGGCAGCAGTAGATACCTGCGTACATCTCAACCAATGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281405.9
ENST00000345530.8
ENST00000414212.5
CDS GCA 90 bp AACAGCTTTGTTCCATTGGTTGAGATGTACGCAGGTATCTACTGCTaGCTTTGGTTGACTACATTTCAAAAATGCAGTCACTGCTTGTTC +
Preference number: 5 (lower is better)
Translates to: NSFVPLVEMYAGIYC*LWLTTFQKCSHCLF
Trigger: GAACAAGCAGTGACTGCATTTTTGAAATGTAGTCAACCAAAGGCAGCAGTAGATACCTGCGTACATCTCAACCAATGGAACAAAGCTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281405.9
ENST00000345530.8
ENST00000414212.5
CDS-3UTR CAA 90 bp CTTGTTAGGCACACTGCTTATTTGTACAGCTTTATCAGTCAGTTCCATCATTTCATGAACCCTTGTTCCTaGTTCCAGGATACACACTGC +
Preference number: 5 (lower is better)
Translates to: LVRHTAYLYSFISQFHHFMNPCS*FQDTHC
Trigger: GCAGTGTGTATCCTGGAACAAGGAACAAGGGTTCAT...GAAATGATGGAACTGACTGATAAAGCTGTACAAATAAGCAGTGTGCCTAACAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CAA 90 bp CTTGTTAGGCACACTGCTTATTTGTACAGCTTTATCAGTCAGTTCCATCATTTCGCATGCTATGAACCCTaGTTCCTTGTTCCAGGATAC +
Preference number: 5 (lower is better)
Translates to: LVRHTAYLYSFISQFHHFACYEP*FLVPGY
Trigger: GTATCCTGGAACAAGGAACAAGGGTTCATAGCATGC...GAAATGATGGAACTGACTGATAAAGCTGTACAAATAAGCAGTGTGCCTAACAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CAA 90 bp CTTTGCCTCTTCATCTGCAATCTAGCTAACAGAGATCCAATTTCTTTCATACTACAAGGCCCCTCAATTTaGCATCATCTGTCTGCGTCT +
Preference number: 5 (lower is better)
Translates to: LCLFICNLANRDPISFILQGPSI*HHLSAS
Trigger: AGACGCAGACAGATGATGCAAAATTGAGGGGCCTTG...TAGTATGAAAGAAATTGGATCTCTGTTAGCTAGATTGCAGATGAAGAGGCAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414212.5
CDS-3UTR CAA 90 bp GTCATCTGCATCACCAGATCCAGTTTTCAGGAGCTGGAGTACTCTAAACCAATCAATCAAAACGGGATTTaGGTCATTCTCATGTCTCAT +
Preference number: 5 (lower is better)
Translates to: VICITRSSFQELEYSKPINQNGI*VILMSH
Trigger: ATGAGACATGAGAATGACCAAAATCCCGTTTTGATT...GATTGGTTTAGAGTACTCCAGCTCCTGAAAACTGGATCTGGTGATGCAGATGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445063.5
CDS-3UTR CAA 90 bp CAGCATTCAACCACTTTTGTCGATCAGCAAAGTAGTCTCCAATGGCATTGTTGGGCTATCACATGGGTTTaGGTCATTGCAACAAACAAT +
Preference number: 5 (lower is better)
Translates to: QHSTTFVDQQSSLQWHCWAITWV*VIATNN
Trigger: ATTGTTTGTTGCAATGACCAAAACCCATGTGATAGC...CCAACAATGCCATTGGAGACTACTTTGCTGATCGACAAAAGTGGTTGAATGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445063.5
CDS-3UTR CAA 90 bp CTTGTTAGGCACACTGCTTATTTGTACAGCTTTATCAGTCAGTTCCATCATTTCCAAGCACACCATCCATaGATCCAGAAGGGGTATCAT +
Preference number: 5 (lower is better)
Translates to: LVRHTAYLYSFISQFHHFQAHHP*IQKGYH
Trigger: ATGATACCCCTTCTGGATCAATGGATGGTGTGCTTG...GAAATGATGGAACTGACTGATAAAGCTGTACAAATAAGCAGTGTGCCTAACAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CAA 90 bp TATAAAGAAGTGGTAAGCCTCTGCCCCTCTCCATGCATTATCTGTGAAACGATCTGGATCCCTTGTGCCTaGAATGGTTTTACTATAATC +
Preference number: 5 (lower is better)
Translates to: YKEVVSLCPSPCIICETIWIPCA*NGFTII
Trigger: GATTATAGTAAAACCATTCAAGGCACAAGGGATCCA...GATCGTTTCACAGATAATGCATGGAGAGGGGCAGAGGCTTACCACTTCTTTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR CAA 90 bp AAGTCTGAGGAGTCAACAGGTGATTCTAGAACTAAAGCAAATGAAAGTGCAACCCAGTTATGGCACAAATaGGATCCCTTGTGCCTTGAA +
Preference number: 5 (lower is better)
Translates to: KSEESTGDSRTKANESATQLWHK*DPLCLE
Trigger: TTCAAGGCACAAGGGATCCAATTTGTGCCATAACTG...GGTTGCACTTTCATTTGCTTTAGTTCTAGAATCACCTGTTGACTCCTCAGACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CAA 90 bp AAGTCTGAGGAGTCAACAGGTGATTCTAGAACTAAAGCAAATGAAAGTGCAACCCTTCAGCCTGTTTCATaGACTCACTCAGTAGTTTGC +
Preference number: 5 (lower is better)
Translates to: KSEESTGDSRTKANESATLQPVS*THSVVC
Trigger: GCAAACTACTGAGTGAGTCAATGAAACAGGCTGAAG...GGTTGCACTTTCATTTGCTTTAGTTCTAGAATCACCTGTTGACTCCTCAGACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CAA 90 bp TTTCTGATTTGGGGAAATTTCCCATTCTGGTATAGAACAAATGAGAAAGCTGGATCTCCAATGGCATTGTaGGCTTGTTCCAGGAGACTG +
Preference number: 5 (lower is better)
Translates to: FLIWGNFPFWYRTNEKAGSPMAL*ACSRRL
Trigger: CAGTCTCCTGGAACAAGCCAACAATGCCATTGGAGA...TCCAGCTTTCTCATTTGTTCTATACCAGAATGGGAAATTTCCCCAAATCAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CAA 90 bp AGGAGTCAACAGGTGATTCTAGAACTAAAGCAAATGAAAGTGCAACCAACAAATTCTCCAATGGCATTGTaGGCTTGTTCCAGGAGACTG +
Preference number: 5 (lower is better)
Translates to: RSQQVILELKQMKVQPTNSPMAL*ACSRRL
Trigger: CAGTCTCCTGGAACAAGCCAACAATGCCATTGGAGA...ATTTGTTGGTTGCACTTTCATTTGCTTTAGTTCTAGAATCACCTGTTGACTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CAA 90 bp AGAGTAGATCTCCACAGGAGGGATGATGTCTTCATAGTCTTTCAGGTGAAGAGCTATCTACTGCTGCCTTaGGTTGACTACATTTCAAAA +
Preference number: 5 (lower is better)
Translates to: RVDLHRRDDVFIVFQVKSYLLLP*VDYISK
Trigger: TTTTGAAATGTAGTCAACCAAAGGCAGCAGTAGATA...GCTCTTCACCTGAAAGACTATGAAGACATCATCCCTCCTGTGGAGATCTACTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414212.5
CDS-3UTR CAA 90 bp CATCTAGGCTCTAAATCTCTTCTCATAGCTCACTATTCCCAATCTGCAACATGCATCATTGCTTTCTCCTaGTTCCTCACTGTGTATTGC +
Preference number: 5 (lower is better)
Translates to: HLGSKSLLIAHYSQSATCIIAFS*FLTVYC
Trigger: GCAATACACAGTGAGGAACAAGGAGAAAGCAATGAT...GCATGTTGCAGATTGGGAATAGTGAGCTATGAGAAGAGATTTAGAGCCTAGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CAA 90 bp AAGTCTGAGGAGTCAACAGGTGATTCTAGAACTAAAGCAAATGAAAGTGCAACCGTCAACATTACTGTGTaGCTTGTTAGGCACACTGCT +
Preference number: 5 (lower is better)
Translates to: KSEESTGDSRTKANESATVNITV*LVRHTA
Trigger: AGCAGTGTGCCTAACAAGCAACACAGTAATGTTGAC...GGTTGCACTTTCATTTGCTTTAGTTCTAGAATCACCTGTTGACTCCTCAGACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS GCA 90 bp CTTTGCCACACGATATTGCCAGGTATAAAATGCTTCTTTCGAGGCTaGTATCACATGGGTTTTGGTCATTGCAACAAACAATGGTACAAT +
Preference number: 5 (lower is better)
Translates to: LCHTILPGIKCFFRG*YHMGFGHCNKQWYN
Trigger: ATTGTACCATTGTTTGTTGCAATGACCAAAACCCATGTGATAGCAGCCTCGAAAGAAGCATTTTATACCTGGCAATATCGTGTGGCAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281405.9
ENST00000345530.8
ENST00000414212.5
CDS GCA 90 bp TACGCAGGTATCTACTGCTGCCTTTGGTTGACTACATTTCAAAAATaGAGTCACTGCTTGTTCACACATTCCAACTCTGACAAACATTTG +
Preference number: 5 (lower is better)
Translates to: YAGIYCCLWLTTFQK*SHCLFTHSNSDKHL
Trigger: CAAATGTTTGTCAGAGTTGGAATGTGTGAACAAGCAGTGACTGCATTTTTGAAATGTAGTCAACCAAAGGCAGCAGTAGATACCTGCGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281405.9
ENST00000345530.8
ENST00000414212.5
CDS CCA 90 bp TTTGTTCCATTGGTTGAGATGTACGCAGGTATCTACTGCTGCCTTTaGTTGACTACATTTCAAAAATGCAGTCACTGCTTGTTCACACAT +
Preference number: 5 (lower is better)
Translates to: FVPLVEMYAGIYCCL*LTTFQKCSHCLFTH
Trigger: ATGTGTGAACAAGCAGTGACTGCATTTTTGAAATGTAGTCAACCAAAGGCAGCAGTAGATACCTGCGTACATCTCAACCAATGGAACAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281405.9
ENST00000345530.8
ENST00000414212.5
CDS-3UTR CAA 90 bp CATCTAGGCTCTAAATCTCTTCTCATAGCTCACTATTCCCAATCTGCAACATGCTGCAGCTTCACGTTATaGGGAATGGAAATTTTCTTG +
Preference number: 5 (lower is better)
Translates to: HLGSKSLLIAHYSQSATCCSFTL*GMEIFL
Trigger: CAAGAAAATTTCCATTCCCAATAACGTGAAGCTGCA...GCATGTTGCAGATTGGGAATAGTGAGCTATGAGAAGAGATTTAGAGCCTAGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CAA 90 bp TTTCTGATTTGGGGAAATTTCCCATTCTGGTATAGAACAAATGAGAAAGCTGGAATGAACCCTTGTTCCTaGTTCCAGGATACACACTGC +
Preference number: 5 (lower is better)
Translates to: FLIWGNFPFWYRTNEKAGMNPCS*FQDTHC
Trigger: GCAGTGTGTATCCTGGAACAAGGAACAAGGGTTCAT...TCCAGCTTTCTCATTTGTTCTATACCAGAATGGGAAATTTCCCCAAATCAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CAA 90 bp TATAAAGAAGTGGTAAGCCTCTGCCCCTCTCCATGCATTATCTGTGAAACGATCTGTGTATTTCCCCATTaGCCATTCCAAAAAGTAAGA +
Preference number: 5 (lower is better)
Translates to: YKEVVSLCPSPCIICETICVFPH*PFQKVR
Trigger: TCTTACTTTTTGGAATGGCAAATGGGGAAATACACA...GATCGTTTCACAGATAATGCATGGAGAGGGGCAGAGGCTTACCACTTCTTTATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000414212.5
ENST00000445063.5
CDS-3UTR CAA 90 bp CAGCATTCAACCACTTTTGTCGATCAGCAAAGTAGTCTCCAATGGCATTGTTGGCATAAACTACAGTGTTaGAGCAATAACCCCACTTAT +
Preference number: 5 (lower is better)
Translates to: QHSTTFVDQQSSLQWHCWHKLQC*SNNPTY
Trigger: ATAAGTGGGGTTATTGCTCAAACACTGTAGTTTATG...CCAACAATGCCATTGGAGACTACTTTGCTGATCGACAAAAGTGGTTGAATGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445063.5
CDS-3UTR CAA 90 bp CATCTAGGCTCTAAATCTCTTCTCATAGCTCACTATTCCCAATCTGCAACATGCCATGGGTTTTGGTCATaGCAACAAACAATGGTACAA +
Preference number: 5 (lower is better)
Translates to: HLGSKSLLIAHYSQSATCHGFWS*QQTMVQ
Trigger: TTGTACCATTGTTTGTTGCAATGACCAAAACCCATG...GCATGTTGCAGATTGGGAATAGTGAGCTATGAGAAGAGATTTAGAGCCTAGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CAA 90 bp CATCTAGGCTCTAAATCTCTTCTCATAGCTCACTATTCCCAATCTGCAACATGCGCTATCACATGGGTTTaGGTCATTGCAACAAACAAT +
Preference number: 5 (lower is better)
Translates to: HLGSKSLLIAHYSQSATCAITWV*VIATNN
Trigger: ATTGTTTGTTGCAATGACCAAAACCCATGTGATAGC...GCATGTTGCAGATTGGGAATAGTGAGCTATGAGAAGAGATTTAGAGCCTAGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CAA 90 bp CATCTAGGCTCTAAATCTCTTCTCATAGCTCACTATTCCCAATCTGCAACATGCTGGATCCCTTGTGCCTaGAATGGTTTTACTATAATC +
Preference number: 5 (lower is better)
Translates to: HLGSKSLLIAHYSQSATCWIPCA*NGFTII
Trigger: GATTATAGTAAAACCATTCAAGGCACAAGGGATCCA...GCATGTTGCAGATTGGGAATAGTGAGCTATGAGAAGAGATTTAGAGCCTAGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CAA 90 bp CTTGTTAGGCACACTGCTTATTTGTACAGCTTTATCAGTCAGTTCCATCATTTCACTGCACATCCAGAATaGATACTCAGTGATTGGGCT +
Preference number: 5 (lower is better)
Translates to: LVRHTAYLYSFISQFHHFTAHPE*ILSDWA
Trigger: AGCCCAATCACTGAGTATCAATTCTGGATGTGCAGT...GAAATGATGGAACTGACTGATAAAGCTGTACAAATAAGCAGTGTGCCTAACAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CAA 90 bp TTTTATTTGGTTTATAAGGCTTTCTGTTCCATGACCTCTGGAATAGCTTGCGAGACTGCACATCCAGAATaGATACTCAGTGATTGGGCT +
Preference number: 5 (lower is better)
Translates to: FYLVYKAFCSMTSGIACETAHPE*ILSDWA
Trigger: AGCCCAATCACTGAGTATCAATTCTGGATGTGCAGT...CTCGCAAGCTATTCCAGAGGTCATGGAACAGAAAGCCTTATAAACCAAATAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CAA 90 bp CTTGTTAGGCACACTGCTTATTTGTACAGCTTTATCAGTCAGTTCCATCATTTCAAATCAGGATTATCTTaGGCCCACTTCATATCCCAG +
Preference number: 5 (lower is better)
Translates to: LVRHTAYLYSFISQFHHFKSGLS*AHFISQ
Trigger: CTGGGATATGAAGTGGGCCAAAGATAATCCTGATTT...GAAATGATGGAACTGACTGATAAAGCTGTACAAATAAGCAGTGTGCCTAACAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CAA 90 bp AGGAGTCAACAGGTGATTCTAGAACTAAAGCAAATGAAAGTGCAACCAACAAATCACAAACTTAATGCCTaGGTAATCTTTGCAGCGCAC +
Preference number: 5 (lower is better)
Translates to: RSQQVILELKQMKVQPTNHKLNA*VIFAAH
Trigger: GTGCGCTGCAAAGATTACCAAGGCATTAAGTTTGTG...ATTTGTTGGTTGCACTTTCATTTGCTTTAGTTCTAGAATCACCTGTTGACTCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CAA 90 bp ATGATGCTGTCTTCAATATACTACCTAATTCTGTTTATGCAACTTCTCACCAGGCTTCAGCCTGTTTCATaGACTCACTCAGTAGTTTGC +
Preference number: 5 (lower is better)
Translates to: MMLSSIYYLILFMQLLTRLQPVS*THSVVC
Trigger: GCAAACTACTGAGTGAGTCAATGAAACAGGCTGAAG...CCTGGTGAGAAGTTGCATAAACAGAATTAGGTAGTATATTGAAGACAGCATCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CAA 90 bp CTTGTTAGGCACACTGCTTATTTGTACAGCTTTATCAGTCAGTTCCATCATTTCTTCCTGGTTCCGTCCTaGTACATAATATTGTACAGC +
Preference number: 5 (lower is better)
Translates to: LVRHTAYLYSFISQFHHFFLVPS*YIILYS
Trigger: GCTGTACAATATTATGTACAAGGACGGAACCAGGAA...GAAATGATGGAACTGACTGATAAAGCTGTACAAATAAGCAGTGTGCCTAACAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CAA 90 bp AGGAGTCAACAGGTGATTCTAGAACTAAAGCAAATGAAAGTGCAACCAACAAATGCTTTGTTCCATTGGTaGAGATGTACGCAGGTATCT +
Preference number: 5 (lower is better)
Translates to: RSQQVILELKQMKVQPTNALFHW*RCTQVS
Trigger: AGATACCTGCGTACATCTCAACCAATGGAACAAAGC...ATTTGTTGGTTGCACTTTCATTTGCTTTAGTTCTAGAATCACCTGTTGACTCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CAA 90 bp ATGATGCTGTCTTCAATATACTACCTAATTCTGTTTATGCAACTTCTCACCAGGTGCAACATGCTGAACTaGTCTCTGTCTCTACAAGAC +
Preference number: 5 (lower is better)
Translates to: MMLSSIYYLILFMQLLTRCNMLN*SLSLQD
Trigger: GTCTTGTAGAGACAGAGACAAGTTCAGCATGTTGCA...CCTGGTGAGAAGTTGCATAAACAGAATTAGGTAGTATATTGAAGACAGCATCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CAA 90 bp CATCTAGGCTCTAAATCTCTTCTCATAGCTCACTATTCCCAATCTGCAACATGCAGTGTTAATCTATCATaGCTTTCTCCTTGTTCCTCA +
Preference number: 5 (lower is better)
Translates to: HLGSKSLLIAHYSQSATCSVNLS*LSPCSS
Trigger: TGAGGAACAAGGAGAAAGCAATGATAGATTAACACT...GCATGTTGCAGATTGGGAATAGTGAGCTATGAGAAGAGATTTAGAGCCTAGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS CCA 90 bp TTTTCGTATCCCAGAAGACAACACAATATTCTGGACGATCAGGTCTaGTATATGCATAAACTACAGTGTTTGAGCAATAACCCCACTTAT +
Preference number: 5 (lower is better)
Translates to: FSYPRRQHNILDDQV*YMHKLQCLSNNPTY
Trigger: ATAAGTGGGGTTATTGCTCAAACACTGTAGTTTATGCATATACCAGACCTGATCGTCCAGAATATTGTGTTGTCTTCTGGGATACGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281405.9
ENST00000345530.8
ENST00000414212.5
ENST00000445063.5
CDS CCA 90 bp GCCAGGTATAAAATGCTTCTTTCGAGGCTGCTATCACATGGGTTTTaGTCATTGCAACAAACAATGGTACAATATCAATGTATTTGGGAT +
Preference number: 5 (lower is better)
Translates to: ARYKMLLSRLLSHGF*SLQQTMVQYQCIWD
Trigger: ATCCCAAATACATTGATATTGTACCATTGTTTGTTGCAATGACCAAAACCCATGTGATAGCAGCCTCGAAAGAAGCATTTTATACCTGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281405.9
ENST00000345530.8
ENST00000414212.5
CDS-3UTR CAA 90 bp CTTGTTAGGCACACTGCTTATTTGTACAGCTTTATCAGTCAGTTCCATCATTTCTGCAGCTTCACGTTATaGGGAATGGAAATTTTCTTG +
Preference number: 5 (lower is better)
Translates to: LVRHTAYLYSFISQFHHFCSFTL*GMEIFL
Trigger: CAAGAAAATTTCCATTCCCAATAACGTGAAGCTGCA...GAAATGATGGAACTGACTGATAAAGCTGTACAAATAAGCAGTGTGCCTAACAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CAA 90 bp AAGTCTGAGGAGTCAACAGGTGATTCTAGAACTAAAGCAAATGAAAGTGCAACCTGTGTATTTCCCCATTaGCCATTCCAAAAAGTAAGA +
Preference number: 5 (lower is better)
Translates to: KSEESTGDSRTKANESATCVFPH*PFQKVR
Trigger: TCTTACTTTTTGGAATGGCAAATGGGGAAATACACA...GGTTGCACTTTCATTTGCTTTAGTTCTAGAATCACCTGTTGACTCCTCAGACTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CAA 90 bp TTTTATTTGGTTTATAAGGCTTTCTGTTCCATGACCTCTGGAATAGCTTGCGAGACAATATCAATGTATTaGGGATCCAAGGGTGTACCA +
Preference number: 5 (lower is better)
Translates to: FYLVYKAFCSMTSGIACETISMY*GSKGVP
Trigger: TGGTACACCCTTGGATCCCAAATACATTGATATTGT...CTCGCAAGCTATTCCAGAGGTCATGGAACAGAAAGCCTTATAAACCAAATAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CAA 90 bp CTTGTTAGGCACACTGCTTATTTGTACAGCTTTATCAGTCAGTTCCATCATTTCACAATATCAATGTATTaGGGATCCAAGGGTGTACCA +
Preference number: 5 (lower is better)
Translates to: LVRHTAYLYSFISQFHHFTISMY*GSKGVP
Trigger: TGGTACACCCTTGGATCCCAAATACATTGATATTGT...GAAATGATGGAACTGACTGATAAAGCTGTACAAATAAGCAGTGTGCCTAACAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CAA 90 bp ATGATGCTGTCTTCAATATACTACCTAATTCTGTTTATGCAACTTCTCACCAGGCTTTGCCACACGATATaGCCAGGTATAAAATGCTTC +
Preference number: 5 (lower is better)
Translates to: MMLSSIYYLILFMQLLTRLCHTI*PGIKCF
Trigger: GAAGCATTTTATACCTGGCAATATCGTGTGGCAAAG...CCTGGTGAGAAGTTGCATAAACAGAATTAGGTAGTATATTGAAGACAGCATCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CAA 90 bp TTTCTGATTTGGGGAAATTTCCCATTCTGGTATAGAACAAATGAGAAAGCTGGACTTTGCCACACGATATaGCCAGGTATAAAATGCTTC +
Preference number: 5 (lower is better)
Translates to: FLIWGNFPFWYRTNEKAGLCHTI*PGIKCF
Trigger: GAAGCATTTTATACCTGGCAATATCGTGTGGCAAAG...TCCAGCTTTCTCATTTGTTCTATACCAGAATGGGAAATTTCCCCAAATCAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CAA 90 bp TTTTATTTGGTTTATAAGGCTTTCTGTTCCATGACCTCTGGAATAGCTTGCGAGTGGATCCCTTGTGCCTaGAATGGTTTTACTATAATC +
Preference number: 5 (lower is better)
Translates to: FYLVYKAFCSMTSGIACEWIPCA*NGFTII
Trigger: GATTATAGTAAAACCATTCAAGGCACAAGGGATCCA...CTCGCAAGCTATTCCAGAGGTCATGGAACAGAAAGCCTTATAAACCAAATAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CAA 90 bp AGGAGTCAACAGGTGATTCTAGAACTAAAGCAAATGAAAGTGCAACCAACAAATAGCATTCAACCACTTTaGTCGATCAGCAAAGTAGTC +
Preference number: 5 (lower is better)
Translates to: RSQQVILELKQMKVQPTNSIQPL*SISKVV
Trigger: GACTACTTTGCTGATCGACAAAAGTGGTTGAATGCT...ATTTGTTGGTTGCACTTTCATTTGCTTTAGTTCTAGAATCACCTGTTGACTCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CAA 90 bp TTTTATTTGGTTTATAAGGCTTTCTGTTCCATGACCTCTGGAATAGCTTGCGAGTACTGCTGCCTTTGGTaGACTACATTTCAAAAATGC +
Preference number: 5 (lower is better)
Translates to: FYLVYKAFCSMTSGIACEYCCLW*TTFQKC
Trigger: GCATTTTTGAAATGTAGTCAACCAAAGGCAGCAGTA...CTCGCAAGCTATTCCAGAGGTCATGGAACAGAAAGCCTTATAAACCAAATAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CAA 90 bp CTTGTTAGGCACACTGCTTATTTGTACAGCTTTATCAGTCAGTTCCATCATTTCTACTGCTGCCTTTGGTaGACTACATTTCAAAAATGC +
Preference number: 5 (lower is better)
Translates to: LVRHTAYLYSFISQFHHFYCCLW*TTFQKC
Trigger: GCATTTTTGAAATGTAGTCAACCAAAGGCAGCAGTA...GAAATGATGGAACTGACTGATAAAGCTGTACAAATAAGCAGTGTGCCTAACAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CAA 90 bp TTTCTGATTTGGGGAAATTTCCCATTCTGGTATAGAACAAATGAGAAAGCTGGAGCCAATTCAACAGCTTaGTTCCATTGGTTGAGATGT +
Preference number: 5 (lower is better)
Translates to: FLIWGNFPFWYRTNEKAGANSTA*FHWLRC
Trigger: ACATCTCAACCAATGGAACAAAGCTGTTGAATTGGC...TCCAGCTTTCTCATTTGTTCTATACCAGAATGGGAAATTTCCCCAAATCAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CAA 90 bp CTTTGCCTCTTCATCTGCAATCTAGCTAACAGAGATCCAATTTCTTTCATACTAGCCAATTCAACAGCTTaGTTCCATTGGTTGAGATGT +
Preference number: 5 (lower is better)
Translates to: LCLFICNLANRDPISFILANSTA*FHWLRC
Trigger: ACATCTCAACCAATGGAACAAAGCTGTTGAATTGGC...TAGTATGAAAGAAATTGGATCTCTGTTAGCTAGATTGCAGATGAAGAGGCAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414212.5
CDS-3UTR CAA 90 bp TTTCTGATTTGGGGAAATTTCCCATTCTGGTATAGAACAAATGAGAAAGCTGGAATCATTGCTTTCTCCTaGTTCCTCACTGTGTATTGC +
Preference number: 5 (lower is better)
Translates to: FLIWGNFPFWYRTNEKAGIIAFS*FLTVYC
Trigger: GCAATACACAGTGAGGAACAAGGAGAAAGCAATGAT...TCCAGCTTTCTCATTTGTTCTATACCAGAATGGGAAATTTCCCCAAATCAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CAA 90 bp AGGAGTCAACAGGTGATTCTAGAACTAAAGCAAATGAAAGTGCAACCAACAAATATTCCATGTTACAACTaGAACAGAACCACTATGACC +
Preference number: 5 (lower is better)
Translates to: RSQQVILELKQMKVQPTNIPCYN*NRTTMT
Trigger: GGTCATAGTGGTTCTGTTCAAGTTGTAACATGGAAT...ATTTGTTGGTTGCACTTTCATTTGCTTTAGTTCTAGAATCACCTGTTGACTCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CAA 90 bp TTTTATTTGGTTTATAAGGCTTTCTGTTCCATGACCTCTGGAATAGCTTGCGAGTGTGTATTTCCCCATTaGCCATTCCAAAAAGTAAGA +
Preference number: 5 (lower is better)
Translates to: FYLVYKAFCSMTSGIACECVFPH*PFQKVR
Trigger: TCTTACTTTTTGGAATGGCAAATGGGGAAATACACA...CTCGCAAGCTATTCCAGAGGTCATGGAACAGAAAGCCTTATAAACCAAATAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CAA 90 bp TTTTATTTGGTTTATAAGGCTTTCTGTTCCATGACCTCTGGAATAGCTTGCGAGAATCAAAACGGGATTTaGGTCATTCTCATGTCTCAT +
Preference number: 5 (lower is better)
Translates to: FYLVYKAFCSMTSGIACENQNGI*VILMSH
Trigger: ATGAGACATGAGAATGACCAAAATCCCGTTTTGATT...CTCGCAAGCTATTCCAGAGGTCATGGAACAGAAAGCCTTATAAACCAAATAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CAA 90 bp CTTGTTAGGCACACTGCTTATTTGTACAGCTTTATCAGTCAGTTCCATCATTTCCATAAACTACAGTGTTaGAGCAATAACCCCACTTAT +
Preference number: 5 (lower is better)
Translates to: LVRHTAYLYSFISQFHHFHKLQC*SNNPTY
Trigger: ATAAGTGGGGTTATTGCTCAAACACTGTAGTTTATG...GAAATGATGGAACTGACTGATAAAGCTGTACAAATAAGCAGTGTGCCTAACAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CAA 90 bp TTTTATTTGGTTTATAAGGCTTTCTGTTCCATGACCTCTGGAATAGCTTGCGAGCATAAACTACAGTGTTaGAGCAATAACCCCACTTAT +
Preference number: 5 (lower is better)
Translates to: FYLVYKAFCSMTSGIACEHKLQC*SNNPTY
Trigger: ATAAGTGGGGTTATTGCTCAAACACTGTAGTTTATG...CTCGCAAGCTATTCCAGAGGTCATGGAACAGAAAGCCTTATAAACCAAATAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CAA 90 bp ATGATGCTGTCTTCAATATACTACCTAATTCTGTTTATGCAACTTCTCACCAGGCATGGGTTTTGGTCATaGCAACAAACAATGGTACAA +
Preference number: 5 (lower is better)
Translates to: MMLSSIYYLILFMQLLTRHGFWS*QQTMVQ
Trigger: TTGTACCATTGTTTGTTGCAATGACCAAAACCCATG...CCTGGTGAGAAGTTGCATAAACAGAATTAGGTAGTATATTGAAGACAGCATCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CAA 90 bp TTTCTGATTTGGGGAAATTTCCCATTCTGGTATAGAACAAATGAGAAAGCTGGAGCTATCACATGGGTTTaGGTCATTGCAACAAACAAT +
Preference number: 5 (lower is better)
Translates to: FLIWGNFPFWYRTNEKAGAITWV*VIATNN
Trigger: ATTGTTTGTTGCAATGACCAAAACCCATGTGATAGC...TCCAGCTTTCTCATTTGTTCTATACCAGAATGGGAAATTTCCCCAAATCAGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CAA 90 bp CTTTGCCTCTTCATCTGCAATCTAGCTAACAGAGATCCAATTTCTTTCATACTAGCTATCACATGGGTTTaGGTCATTGCAACAAACAAT +
Preference number: 5 (lower is better)
Translates to: LCLFICNLANRDPISFILAITWV*VIATNN
Trigger: ATTGTTTGTTGCAATGACCAAAACCCATGTGATAGC...TAGTATGAAAGAAATTGGATCTCTGTTAGCTAGATTGCAGATGAAGAGGCAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414212.5
CDS-3UTR CAA 90 bp TTTTATTTGGTTTATAAGGCTTTCTGTTCCATGACCTCTGGAATAGCTTGCGAGTTAGGTAATCCTTGTTaGGATGTTCTGGATCCTTTA +
Preference number: 5 (lower is better)
Translates to: FYLVYKAFCSMTSGIACELGNPC*DVLDPL
Trigger: TAAAGGATCCAGAACATCCAAACAAGGATTACCTAA...CTCGCAAGCTATTCCAGAGGTCATGGAACAGAAAGCCTTATAAACCAAATAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CAA 90 bp CTTGTTAGGCACACTGCTTATTTGTACAGCTTTATCAGTCAGTTCCATCATTTCTATCTACTGCTGCCTTaGGTTGACTACATTTCAAAA +
Preference number: 5 (lower is better)
Translates to: LVRHTAYLYSFISQFHHFYLLLP*VDYISK
Trigger: TTTTGAAATGTAGTCAACCAAAGGCAGCAGTAGATA...GAAATGATGGAACTGACTGATAAAGCTGTACAAATAAGCAGTGTGCCTAACAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CAA 90 bp TTTCTGATTTGGGGAAATTTCCCATTCTGGTATAGAACAAATGAGAAAGCTGGAGCGTATCTCTATGTATaGCCTCTACTATATGTAAGC +
Preference number: 5 (lower is better)
Translates to: FLIWGNFPFWYRTNEKAGAYLYV*PLLYVS
Trigger: GCTTACATATAGTAGAGGCAATACATAGAGATACGC...TCCAGCTTTCTCATTTGTTCTATACCAGAATGGGAAATTTCCCCAAATCAGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CAA 90 bp CTTGTTAGGCACACTGCTTATTTGTACAGCTTTATCAGTCAGTTCCATCATTTCGTTCCTCACTGTGTATaGCAAATTGGTTCAATAAAC +
Preference number: 5 (lower is better)
Translates to: LVRHTAYLYSFISQFHHFVPHCV*QIGSIN
Trigger: GTTTATTGAACCAATTTGCAATACACAGTGAGGAAC...GAAATGATGGAACTGACTGATAAAGCTGTACAAATAAGCAGTGTGCCTAACAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS TCA 90 bp TACATTTCAAAAATGCAGTCACTGCTTGTTCACACATTCCAACTCTaGCAAACATTTGTGCTATTTCTGGAAGTAACTTGTGGTTTTCTG +
Preference number: 5 (lower is better)
Translates to: YISKMQSLLVHTFQL*QTFVLFLEVTCGFL
Trigger: CAGAAAACCACAAGTTACTTCCAGAAATAGCACAAATGTTTGTCAGAGTTGGAATGTGTGAACAAGCAGTGACTGCATTTTTGAAATGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS TCA 90 bp AGCTGTACCAAAAACATATCTGAACATTTCATCATATATTCCCGATaGATTTCATTAAGCCCAGAGAGACATTTTACCTTACCCTCCACT +
Preference number: 5 (lower is better)
Translates to: SCTKNISEHFIIYSR*ISLSPERHFTLPST
Trigger: AGTGGAGGGTAAGGTAAAATGTCTCTCTGGGCTTAATGAAATTCATCGGGAATATATGATGAAATGTTCAGATATGTTTTTGGTACAGCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494964.1
CDS-3UTR CAA 90 bp TTTCTGATTTGGGGAAATTTCCCATTCTGGTATAGAACAAATGAGAAAGCTGGAAATCAAAACGGGATTTaGGTCATTCTCATGTCTCAT +
Preference number: 5 (lower is better)
Translates to: FLIWGNFPFWYRTNEKAGNQNGI*VILMSH
Trigger: ATGAGACATGAGAATGACCAAAATCCCGTTTTGATT...TCCAGCTTTCTCATTTGTTCTATACCAGAATGGGAAATTTCCCCAAATCAGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CAA 90 bp ATGATGCTGTCTTCAATATACTACCTAATTCTGTTTATGCAACTTCTCACCAGGTTAGGTAATCCTTGTTaGGATGTTCTGGATCCTTTA +
Preference number: 5 (lower is better)
Translates to: MMLSSIYYLILFMQLLTRLGNPC*DVLDPL
Trigger: TAAAGGATCCAGAACATCCAAACAAGGATTACCTAA...CCTGGTGAGAAGTTGCATAAACAGAATTAGGTAGTATATTGAAGACAGCATCAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CAA 90 bp TTTCTGATTTGGGGAAATTTCCCATTCTGGTATAGAACAAATGAGAAAGCTGGAATTTCTGGAAGTAACTaGTGGTTTTCTGGAAGTGAA +
Preference number: 5 (lower is better)
Translates to: FLIWGNFPFWYRTNEKAGISGSN*WFSGSE
Trigger: TTCACTTCCAGAAAACCACAAGTTACTTCCAGAAAT...TCCAGCTTTCTCATTTGTTCTATACCAGAATGGGAAATTTCCCCAAATCAGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CAA 90 bp AGGAGTCAACAGGTGATTCTAGAACTAAAGCAAATGAAAGTGCAACCAACAAATTATCTACTGCTGCCTTaGGTTGACTACATTTCAAAA +
Preference number: 5 (lower is better)
Translates to: RSQQVILELKQMKVQPTNYLLLP*VDYISK
Trigger: TTTTGAAATGTAGTCAACCAAAGGCAGCAGTAGATA...ATTTGTTGGTTGCACTTTCATTTGCTTTAGTTCTAGAATCACCTGTTGACTCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS-3UTR CAA 90 bp AGGAGTCAACAGGTGATTCTAGAACTAAAGCAAATGAAAGTGCAACCAACAAATGTTCCTCACTGTGTATaGCAAATTGGTTCAATAAAC +
Preference number: 5 (lower is better)
Translates to: RSQQVILELKQMKVQPTNVPHCV*QIGSIN
Trigger: GTTTATTGAACCAATTTGCAATACACAGTGAGGAAC...ATTTGTTGGTTGCACTTTCATTTGCTTTAGTTCTAGAATCACCTGTTGACTCCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281405.9
ENST00000345530.8
CDS CCA 72 bp TTCTGGAAGCCTGCCACAGCTAACACGCTGCCCATGTaGTTCCACTGGATGCCTACTACGTACATGCCAGTG +
Preference number: 6 (lower is better)
Translates to: FWKPATANTLPM*FHWMPTTYMPV
Trigger: CACTGGCATGTACGTAGTAGGCATCCAGTGGAACCACATGGGCAGCGTGTTAGCTGTGGCAGGCTTCCAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281405.9
ENST00000345530.8
ENST00000414212.5
ENST00000445063.5
CDS CCA 72 bp ACAATGTTCACATCTTTGTCCTGCATGGCTGCCTTCTaGAAGCCTGCCACAGCTAACACGCTGCCCATGTGG +
Preference number: 6 (lower is better)
Translates to: TMFTSLSCMAAF*KPATANTLPMW
Trigger: CCACATGGGCAGCGTGTTAGCTGTGGCAGGCTTCCAGAAGGCAGCCATGCAGGACAAAGATGTGAACATTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281405.9
ENST00000345530.8
ENST00000414212.5
ENST00000445063.5
CDS GCA 72 bp CCACAGCTAACACGCTGCCCATGTGGTTCCACTGGATaGCTACTACGTACATGCCAGTGTCAATCAAAACGG +
Preference number: 6 (lower is better)
Translates to: PQLTRCPCGSTG*LLRTCQCQSKR
Trigger: CCGTTTTGATTGACACTGGCATGTACGTAGTAGGCATCCAGTGGAACCACATGGGCAGCGTGTTAGCTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281405.9
ENST00000345530.8
ENST00000414212.5
ENST00000445063.5
CDS CCA 72 bp CCTGCCACAGCTAACACGCTGCCCATGTGGTTCCACTaGATGCCTACTACGTACATGCCAGTGTCAATCAAA +
Preference number: 6 (lower is better)
Translates to: PATANTLPMWFH*MPTTYMPVSIK
Trigger: TTTGATTGACACTGGCATGTACGTAGTAGGCATCCAGTGGAACCACATGGGCAGCGTGTTAGCTGTGGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281405.9
ENST00000345530.8
ENST00000414212.5
ENST00000445063.5
CDS CAA 72 bp CCATCTTCACCACCGCATGCTATGAACCCTTGTTCCTaGTTCCAGGATACACACTGCAGCTTCACGTTATTG +
Preference number: 6 (lower is better)
Translates to: PSSPPHAMNPCS*FQDTHCSFTLL
Trigger: CAATAACGTGAAGCTGCAGTGTGTATCCTGGAACAAGGAACAAGGGTTCATAGCATGCGGTGGTGAAGATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281405.9
ENST00000345530.8
ENST00000414212.5
CDS GCA 72 bp TGCCCATGTGGTTCCACTGGATGCCTACTACGTACATaGCAGTGTCAATCAAAACGGGATTTTGGTCATTCT +
Preference number: 6 (lower is better)
Translates to: CPCGSTGCLLRT*QCQSKRDFGHS
Trigger: AGAATGACCAAAATCCCGTTTTGATTGACACTGGCATGTACGTAGTAGGCATCCAGTGGAACCACATGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281405.9
ENST00000345530.8
ENST00000414212.5
ENST00000445063.5
CDS CAA 90 bp TTCAGTAATCCATCTTCACCACCGCATGCTATGAACCCTTGTTCCTaGTTCCAGGATACACACTGCAGCTTCACGTTATTGGGAATGGAA +
Preference number: 6 (lower is better)
Translates to: FSNPSSPPHAMNPCS*FQDTHCSFTLLGME
Trigger: TTCCATTCCCAATAACGTGAAGCTGCAGTGTGTATCCTGGAACAAGGAACAAGGGTTCATAGCATGCGGTGGTGAAGATGGATTACTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281405.9
ENST00000345530.8
ENST00000414212.5
CDS GCA 72 bp GAGCTTCTTTGCCACACGATATTGCCAGGTATAAAATaGTTCTTTCGAGGCTGCTATCACATGGGTTTTGGT +
Preference number: 6 (lower is better)
Translates to: ELLCHTILPGIK*FFRGCYHMGFG
Trigger: ACCAAAACCCATGTGATAGCAGCCTCGAAAGAAGCATTTTATACCTGGCAATATCGTGTGGCAAAGAAGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281405.9
ENST00000345530.8
ENST00000414212.5
ENST00000445063.5
CDS CAA 90 bp GTTCCATTGGTTGAGATGTACGCAGGTATCTACTGCTGCCTTTGGTaGACTACATTTCAAAAATGCAGTCACTGCTTGTTCACACATTCC +
Preference number: 6 (lower is better)
Translates to: VPLVEMYAGIYCCLW*TTFQKCSHCLFTHS
Trigger: GGAATGTGTGAACAAGCAGTGACTGCATTTTTGAAATGTAGTCAACCAAAGGCAGCAGTAGATACCTGCGTACATCTCAACCAATGGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281405.9
ENST00000345530.8
ENST00000414212.5
CDS TCA 72 bp CTGTCCGTCAGCATTCCAGCTCATACTGCGAACAACTaGTTTATTTCGATTGTTGATCATCTCCTCAATCCA +
Preference number: 6 (lower is better)
Translates to: LSVSIPAHTANN*FISIVDHLLNP
Trigger: TGGATTGAGGAGATGATCAACAATCGAAATAAATCAGTTGTTCGCAGTATGAGCTGGAATGCTGACGGACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281405.9
ENST00000345530.8
ENST00000414212.5
CDS CAA 72 bp GTTGAGATGTACGCAGGTATCTACTGCTGCCTTTGGTaGACTACATTTCAAAAATGCAGTCACTGCTTGTTC +
Preference number: 6 (lower is better)
Translates to: VEMYAGIYCCLW*TTFQKCSHCLF
Trigger: GAACAAGCAGTGACTGCATTTTTGAAATGTAGTCAACCAAAGGCAGCAGTAGATACCTGCGTACATCTCAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281405.9
ENST00000345530.8
ENST00000414212.5
CDS CAA 90 bp CCGTCAGCATTCCAGCTCATACTGCGAACAACTGATTTATTTCGATaGTTGATCATCTCCTCAATCCAAGAGCCTTTATATAACATCCAC +
Preference number: 6 (lower is better)
Translates to: PSAFQLILRTTDLFR*LIISSIQEPLYNIH
Trigger: GTGGATGTTATATAAAGGCTCTTGGATTGAGGAGATGATCAACAATCGAAATAAATCAGTTGTTCGCAGTATGAGCTGGAATGCTGACGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281405.9
ENST00000345530.8
ENST00000414212.5
CDS CAA 90 bp AGTGTCAATCAAAACGGGATTTTGGTCATTCTCATGTCTCATTATTaGGCATCTTCCATTATCAAAGCAAACAGCAAGGCAAGGGCAATC +
Preference number: 6 (lower is better)
Translates to: SVNQNGILVILMSHY*ASSIIKANSKARAI
Trigger: GATTGCCCTTGCCTTGCTGTTTGCTTTGATAATGGAAGATGCCAAATAATGAGACATGAGAATGACCAAAATCCCGTTTTGATTGACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281405.9
ENST00000345530.8
ENST00000414212.5
ENST00000445063.5
CDS CCA 72 bp CCCAGAAGACAACACAATATTCTGGACGATCAGGTCTaGTATATGCATAAACTACAGTGTTTGAGCAATAAC +
Preference number: 6 (lower is better)
Translates to: PRRQHNILDDQV*YMHKLQCLSNN
Trigger: GTTATTGCTCAAACACTGTAGTTTATGCATATACCAGACCTGATCGTCCAGAATATTGTGTTGTCTTCTGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281405.9
ENST00000345530.8
ENST00000414212.5
ENST00000445063.5
CDS CCA 72 bp AAAATGCTTCTTTCGAGGCTGCTATCACATGGGTTTTaGTCATTGCAACAAACAATGGTACTGAGGATGATT +
Preference number: 6 (lower is better)
Translates to: KMLLSRLLSHGF*SLQQTMVLRMI
Trigger: AATCATCCTCAGTACCATTGTTTGTTGCAATGACCAAAACCCATGTGATAGCAGCCTCGAAAGAAGCATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445063.5
CDS GCA 72 bp TTCTTTCGAGGCTGCTATCACATGGGTTTTGGTCATTaGAACAAACAATGGTACAATATCAATGTATTTGGG +
Preference number: 6 (lower is better)
Translates to: FFRGCYHMGFGH*NKQWYNINVFG
Trigger: CCCAAATACATTGATATTGTACCATTGTTTGTTGCAATGACCAAAACCCATGTGATAGCAGCCTCGAAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281405.9
ENST00000345530.8
ENST00000414212.5
CDS GCA 72 bp TGCCTTTGGTTGACTACATTTCAAAAATGCAGTCACTaGTTGTTCACACATTCCAACTCTGACAAACATTTG +
Preference number: 6 (lower is better)
Translates to: CLWLTTFQKCSH*LFTHSNSDKHL
Trigger: CAAATGTTTGTCAGAGTTGGAATGTGTGAACAAGCAGTGACTGCATTTTTGAAATGTAGTCAACCAAAGGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281405.9
ENST00000345530.8
ENST00000414212.5
CDS CAA 72 bp CAAAACGGGATTTTGGTCATTCTCATGTCTCATTATTaGGCATCTTCCATTATCAAAGCAAACAGCAAGGCA +
Preference number: 6 (lower is better)
Translates to: QNGILVILMSHY*ASSIIKANSKA
Trigger: TGCCTTGCTGTTTGCTTTGATAATGGAAGATGCCAAATAATGAGACATGAGAATGACCAAAATCCCGTTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281405.9
ENST00000345530.8
ENST00000414212.5
ENST00000445063.5
CDS TCA 72 bp ACGATCAGGTCTGGTATATGCATAAACTACAGTGTTTaGGCAATAACCCCACTTATAATTAGGTCGAATGTT +
Preference number: 6 (lower is better)
Translates to: TIRSGICINYSV*AITPLIIRSNV
Trigger: AACATTCGACCTAATTATAAGTGGGGTTATTGCTCAAACACTGTAGTTTATGCATATACCAGACCTGATCGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281405.9
ENST00000345530.8
ENST00000414212.5
ENST00000445063.5
CDS CCA 72 bp ATTGTTTTTCGTATCCCAGAAGACAACACAATATTCTaGACGATCAGGTCTGGTATATGCATAAACTACAGT +
Preference number: 6 (lower is better)
Translates to: IVFRIPEDNTIF*TIRSGICINYS
Trigger: ACTGTAGTTTATGCATATACCAGACCTGATCGTCCAGAATATTGTGTTGTCTTCTGGGATACGAAAAACAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281405.9
ENST00000345530.8
ENST00000414212.5
ENST00000445063.5
CDS CAA 72 bp CAGCTCATACTGCGAACAACTGATTTATTTCGATTGTaGATCATCTCCTCAATCCAAGAGCCTTTATATAAC +
Preference number: 6 (lower is better)
Translates to: QLILRTTDLFRL*IISSIQEPLYN
Trigger: GTTATATAAAGGCTCTTGGATTGAGGAGATGATCAACAATCGAAATAAATCAGTTGTTCGCAGTATGAGCTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281405.9
ENST00000345530.8
ENST00000414212.5
CDS CAA 72 bp TTCCAGCTCATACTGCGAACAACTGATTTATTTCGATaGTTGATCATCTCCTCAATCCAAGAGCCTTTATAT +
Preference number: 6 (lower is better)
Translates to: FQLILRTTDLFR*LIISSIQEPLY
Trigger: ATATAAAGGCTCTTGGATTGAGGAGATGATCAACAATCGAAATAAATCAGTTGTTCGCAGTATGAGCTGGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281405.9
ENST00000345530.8
ENST00000414212.5
CDS TCA 72 bp AGCTCATACTGCGAACAACTGATTTATTTCGATTGTTaGTCATCTCCTCAATCCAAGAGCCTTTATATAACA +
Preference number: 6 (lower is better)
Translates to: SSYCEQLIYFDC*SSPQSKSLYIT
Trigger: TGTTATATAAAGGCTCTTGGATTGAGGAGATGATCAACAATCGAAATAAATCAGTTGTTCGCAGTATGAGCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281405.9
ENST00000345530.8
ENST00000414212.5
CDS CCA 72 bp AAACTAAAATTTGCAATACCTACTGGAAGTAACTTGTaGTTTTCTGGAAGTGAAATGGCAAGGTTCTCTAAC +
Preference number: 6 (lower is better)
Translates to: KLKFAIPTGSNL*FSGSEMARFSN
Trigger: GTTAGAGAACCTTGCCATTTCACTTCCAGAAAACCACAAGTTACTTCCAGTAGGTATTGCAAATTTTAGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453014.1