RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for WDR33 (Homo sapiens)

Ensembl gene IDs: ENSG00000136709

Ensembl transcript IDs: ENST00000322313.9, ENST00000393006.5, ENST00000408998.1, ENST00000409658.7, ENST00000436787.5

Found 692 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGCCCTGGGGCGGCGGCACCGCGCTGCGCCTCGCACTGGGTCGCCTaGGCCGCGGCGCCGGCCTCGCCAAGGTGCTGCCCGTGTGAGGAC +
Preference number: 1 (lower is better)
Translates to: CPGAAAPRCASHWVA*AAAPASPRCCPCED
Trigger: GTCCTCACACGGGCAGCACCTTGGCGAGGCCGGCGCCGCGGCCCAGGCGACCCAGTGCGAGGCGCAGCGCGGTGCCGCCGCCCCAGGGCA
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR GCA 90 bp GTGGCTGGGCCGCGCGGGCTTGCGCTGGACGTGGGCGCGGAGCCCTaGGGAGTCGGCAGCGGCCGGCCTGACGTGCCTCCCGAGCGTGAC +
Preference number: 1 (lower is better)
Translates to: VAGPRGLALDVGAEP*GVGSGRPDVPPERD
Trigger: GTCACGCTCGGGAGGCACGTCAGGCCGGCCGCTGCCGACTCCGCAGGGCTCCGCGCCCACGTCCAGCGCAAGCCCGCGCGGCCCAGCCAC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR GCA 90 bp CGGGAAGCGCGCTGCTGCGGGGCGGCGCGGCGTGCGGACGCCTGCTaGGCTGCGAAGAAGCGCCGTCCCGGCCCGCGCTGCTCTACATGG +
Preference number: 1 (lower is better)
Translates to: REARCCGAARRADAC*AAKKRRPGPRCSTW
Trigger: CCATGTAGAGCAGCGCGGGCCGGGACGGCGCTTCTTCGCAGCGCAGCAGGCGTCCGCACGCCGCGCCGCCCCGCAGCAGCGCGCTTCCCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR GCA 90 bp TGGCGGGAAGCGCGCTGCTGCGGGGCGGCGCGGCGTGCGGACGCCTaGTGCGCTGCGAAGAAGCGCCGTCCCGGCCCGCGCTGCTCTACA +
Preference number: 1 (lower is better)
Translates to: WREARCCGAARRADA*CAAKKRRPGPRCST
Trigger: TGTAGAGCAGCGCGGGCCGGGACGGCGCTTCTTCGCAGCGCAGCAGGCGTCCGCACGCCGCGCCGCCCCGCAGCAGCGCGCTTCCCGCCA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR CCA 90 bp CGCGCAAGTTCGCGCTGCTCTGGTCACTGGGCTCGGCGCTGGCGTTaGCGGGAAGCGCGCTGCTGCGGGGCGGCGCGGCGTGCGGACGCC +
Preference number: 1 (lower is better)
Translates to: RASSRCSGHWARRWR*REARCCGAARRADA
Trigger: GGCGTCCGCACGCCGCGCCGCCCCGCAGCAGCGCGCTTCCCGCCAACGCCAGCGCCGAGCCCAGTGACCAGAGCAGCGCGAACTTGCGCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR CCA 90 bp TGCGCGCGCGCAAGTTCGCGCTGCTCTGGTCACTGGGCTCGGCGCTaGCGTTGGCGGGAAGCGCGCTGCTGCGGGGCGGCGCGGCGTGCG +
Preference number: 1 (lower is better)
Translates to: CARASSRCSGHWARR*RWREARCCGAARRA
Trigger: CGCACGCCGCGCCGCCCCGCAGCAGCGCGCTTCCCGCCAACGCCAGCGCCGAGCCCAGTGACCAGAGCAGCGCGAACTTGCGCGCGCGCA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR GCA 90 bp GCCTCGCACTGGGTCGCCTGGGCCGCGGCGCCGGCCTCGCCAAGGTaGTGCCCGTGTGAGGACCTCGCGCCCTCGCCGCTGGGGAAGTAC +
Preference number: 1 (lower is better)
Translates to: ASHWVAWAAAPASPR*CPCEDLAPSPLGKY
Trigger: GTACTTCCCCAGCGGCGAGGGCGCGAGGTCCTCACACGGGCAGCACCTTGGCGAGGCCGGCGCCGCGGCCCAGGCGACCCAGTGCGAGGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR GCA 90 bp TGCTCTGGTCACTGGGCTCGGCGCTGGCGTTGGCGGGAAGCGCGCTaGTGCGGGGCGGCGCGGCGTGCGGACGCCTGCTGCGCTGCGAAG +
Preference number: 1 (lower is better)
Translates to: CSGHWARRWRWREAR*CGAARRADACCAAK
Trigger: CTTCGCAGCGCAGCAGGCGTCCGCACGCCGCGCCGCCCCGCAGCAGCGCGCTTCCCGCCAACGCCAGCGCCGAGCCCAGTGACCAGAGCA
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR GCA 90 bp CGCGGAGCCAGCGCCGTCGGAGACCGCGCCGGCCGAGCTGAGGACTaGACGCCGCTGTGCGGAAGCCCGTGGCGAAGGCCCTGCCCTAAC +
Preference number: 1 (lower is better)
Translates to: RGASAVGDRAGRAED*TPLCGSPWRRPCPN
Trigger: GTTAGGGCAGGGCCTTCGCCACGGGCTTCCGCACAGCGGCGTGCAGTCCTCAGCTCGGCCGGCGCGGTCTCCGACGGCGCTGGCTCCGCG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR GCA 90 bp GCGGACGCCTGCTGCGCTGCGAAGAAGCGCCGTCCCGGCCCGCGCTaGTCTACATGGCAGCGCTGGGCGCCACGCTGTTCGCCGCGCTGG +
Preference number: 1 (lower is better)
Translates to: ADACCAAKKRRPGPR*STWQRWAPRCSPRW
Trigger: CCAGCGCGGCGAACAGCGTGGCGCCCAGCGCTGCCATGTAGAGCAGCGCGGGCCGGGACGGCGCTTCTTCGCAGCGCAGCAGGCGTCCGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR GCA 90 bp TCTGGTCACTGGGCTCGGCGCTGGCGTTGGCGGGAAGCGCGCTGCTaGGGGGCGGCGCGGCGTGCGGACGCCTGCTGCGCTGCGAAGAAG +
Preference number: 1 (lower is better)
Translates to: SGHWARRWRWREARC*GAARRADACCAAKK
Trigger: CTTCTTCGCAGCGCAGCAGGCGTCCGCACGCCGCGCCGCCCCGCAGCAGCGCGCTTCCCGCCAACGCCAGCGCCGAGCCCAGTGACCAGA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR CCA 90 bp CGCTGCTCTACATGGCAGCGCTGGGCGCCACGCTGTTCGCCGCGCTaGGCCTTCGCAGCACGCTGCTCACGGTGCTGGGCGCGGGCGCGC +
Preference number: 1 (lower is better)
Translates to: RCSTWQRWAPRCSPR*AFAARCSRCWARAR
Trigger: GCGCGCCCGCGCCCAGCACCGTGAGCAGCGTGCTGCGAAGGCCCAGCGCGGCGAACAGCGTGGCGCCCAGCGCTGCCATGTAGAGCAGCG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR TCA 90 bp GGAAGTACGCGGAGCCAGCGCCGTCGGAGACCGCGCCGGCCGAGCTaGGGACTGCACGCCGCTGTGCGGAAGCCCGTGGCGAAGGCCCTG +
Preference number: 1 (lower is better)
Translates to: GSTRSQRRRRPRRPS*GLHAAVRKPVAKAL
Trigger: CAGGGCCTTCGCCACGGGCTTCCGCACAGCGGCGTGCAGTCCTCAGCTCGGCCGGCGCGGTCTCCGACGGCGCTGGCTCCGCGTACTTCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR CCA 90 bp GCGAAGAAGCGCCGTCCCGGCCCGCGCTGCTCTACATGGCAGCGCTaGGCGCCACGCTGTTCGCCGCGCTGGGCCTTCGCAGCACGCTGC +
Preference number: 1 (lower is better)
Translates to: AKKRRPGPRCSTWQR*APRCSPRWAFAARC
Trigger: GCAGCGTGCTGCGAAGGCCCAGCGCGGCGAACAGCGTGGCGCCCAGCGCTGCCATGTAGAGCAGCGCGGGCCGGGACGGCGCTTCTTCGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR CCA 90 bp CGGTGTTGCTGCTGCGCGCGCGCAAGTTCGCGCTGCTCTGGTCACTaGGCTCGGCGCTGGCGTTGGCGGGAAGCGCGCTGCTGCGGGGCG +
Preference number: 1 (lower is better)
Translates to: RCCCCARASSRCSGH*ARRWRWREARCCGA
Trigger: CGCCCCGCAGCAGCGCGCTTCCCGCCAACGCCAGCGCCGAGCCCAGTGACCAGAGCAGCGCGAACTTGCGCGCGCGCAGCAGCAACACCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR GCA 90 bp GCCGTCGGAGACCGCGCCGGCCGAGCTGAGGACTGCACGCCGCTGTaGGGAAGCCCGTGGCGAAGGCCCTGCCCTAACAGCCTGCGAGTC +
Preference number: 1 (lower is better)
Translates to: AVGDRAGRAEDCTPL*GSPWRRPCPNSLRV
Trigger: GACTCGCAGGCTGTTAGGGCAGGGCCTTCGCCACGGGCTTCCGCACAGCGGCGTGCAGTCCTCAGCTCGGCCGGCGCGGTCTCCGACGGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR CCA 90 bp TGCTGCGCTGCGAAGAAGCGCCGTCCCGGCCCGCGCTGCTCTACATaGCAGCGCTGGGCGCCACGCTGTTCGCCGCGCTGGGCCTTCGCA +
Preference number: 1 (lower is better)
Translates to: CCAAKKRRPGPRCST*QRWAPRCSPRWAFA
Trigger: TGCGAAGGCCCAGCGCGGCGAACAGCGTGGCGCCCAGCGCTGCCATGTAGAGCAGCGCGGGCCGGGACGGCGCTTCTTCGCAGCGCAGCA
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR GCA 90 bp CGCTCTACGCACCGGTGTTGCTGCTGCGCGCGCGCAAGTTCGCGCTaGTCTGGTCACTGGGCTCGGCGCTGGCGTTGGCGGGAAGCGCGC +
Preference number: 1 (lower is better)
Translates to: RSTHRCCCCARASSR*SGHWARRWRWREAR
Trigger: GCGCGCTTCCCGCCAACGCCAGCGCCGAGCCCAGTGACCAGAGCAGCGCGAACTTGCGCGCGCGCAGCAGCAACACCGGTGCGTAGAGCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR GCA 90 bp CCGCGAGCGCCGCAGGCCCTGCCCCTTTCGCCGTCGCCGACCAATTaGCGCCCGAAGACCGAACCGCTTCAGCGGAGGGCCGGAAGTGAG +
Preference number: 1 (lower is better)
Translates to: PRAPQALPLSPSPTN*RPKTEPLQRRAGSE
Trigger: CTCACTTCCGGCCCTCCGCTGAAGCGGTTCGGTCTTCGGGCGGCAATTGGTCGGCGACGGCGAAAGGGGCAGGGCCTGCGGCGCTCGCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR GCA 90 bp TCCGCAGAGCAGGCACCGCGGCACTTCCGCGAGCGCCGCAGGCCCTaGCCCTTTCGCCGTCGCCGACCAATTGCCGCCCGAAGACCGAAC +
Preference number: 1 (lower is better)
Translates to: SAEQAPRHFRERRRP*PFRRRRPIAARRPN
Trigger: GTTCGGTCTTCGGGCGGCAATTGGTCGGCGACGGCGAAAGGGGCAGGGCCTGCGGCGCTCGCGGAAGTGCCGCGGTGCCTGCTCTGCGGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR CCA 90 bp TACGCACCGGTGTTGCTGCTGCGCGCGCGCAAGTTCGCGCTGCTCTaGTCACTGGGCTCGGCGCTGGCGTTGGCGGGAAGCGCGCTGCTG +
Preference number: 1 (lower is better)
Translates to: YAPVLLLRARKFALL*SLGSALALAGSALL
Trigger: CAGCAGCGCGCTTCCCGCCAACGCCAGCGCCGAGCCCAGTGACCAGAGCAGCGCGAACTTGCGCGCGCGCAGCAGCAACACCGGTGCGTA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR GCA 90 bp TTTCTGCCACCGCCTTGTCCAAGATGGCGGACCTCCACCGCCAGCTaGAGGAGTACCTGGCGCAGGGGAAAGCTGGCGGCCCGGCGGCCG +
Preference number: 1 (lower is better)
Translates to: FLPPPCPRWRTSTAS*RSTWRRGKLAARRP
Trigger: CGGCCGCCGGGCCGCCAGCTTTCCCCTGCGCCAGGTACTCCTGCAGCTGGCGGTGGAGGTCCGCCATCTTGGACAAGGCGGTGGCAGAAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR CCA 90 bp AGACCGCAAGGGCGCCTACTCCGAACAAGGAAGAGGGTCAGGCGCTaGGAGGGCGACTGCAAGCGGACAGGCAGCACCTGCGACCACGGT +
Preference number: 1 (lower is better)
Translates to: RPQGRLLRTRKRVRR*EGDCKRTGSTCDHG
Trigger: ACCGTGGTCGCAGGTGCTGCCTGTCCGCTTGCAGTCGCCCTCCCAGCGCCTGACCCTCTTCCTTGTTCGGAGTAGGCGCCCTTGCGGTCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR GCA 90 bp AGGGTCAGGCGCTGGGAGGGCGACTGCAAGCGGACAGGCAGCACCTaGGACCACGGTACTTGGGGACACCACAAAAGTCCGCAGAGCAGG +
Preference number: 1 (lower is better)
Translates to: RVRRWEGDCKRTGST*DHGTWGHHKSPQSR
Trigger: CCTGCTCTGCGGACTTTTGTGGTGTCCCCAAGTACCGTGGTCGCAGGTGCTGCCTGTCCGCTTGCAGTCGCCCTCCCAGCGCCTGACCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR GCA 90 bp CGCCTACTCCGAACAAGGAAGAGGGTCAGGCGCTGGGAGGGCGACTaGAAGCGGACAGGCAGCACCTGCGACCACGGTACTTGGGGACAC +
Preference number: 1 (lower is better)
Translates to: RLLRTRKRVRRWEGD*KRTGSTCDHGTWGH
Trigger: GTGTCCCCAAGTACCGTGGTCGCAGGTGCTGCCTGTCCGCTTGCAGTCGCCCTCCCAGCGCCTGACCCTCTTCCTTGTTCGGAGTAGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR CCA 90 bp GAGGGCGACTGCAAGCGGACAGGCAGCACCTGCGACCACGGTACTTaGGGACACCACAAAAGTCCGCAGAGCAGGCACCGCGGCACTTCC +
Preference number: 1 (lower is better)
Translates to: EGDCKRTGSTCDHGT*GHHKSPQSRHRGTS
Trigger: GGAAGTGCCGCGGTGCCTGCTCTGCGGACTTTTGTGGTGTCCCCAAGTACCGTGGTCGCAGGTGCTGCCTGTCCGCTTGCAGTCGCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR TCA 90 bp CAATTGCCGCCCGAAGACCGAACCGCTTCAGCGGAGGGCCGGAAGTaGGCCGCAGCTTTTCCTTTCTGCCACCGCCTTGTCCAAGATGGC +
Preference number: 1 (lower is better)
Translates to: QLPPEDRTASAEGRK*AAAFPFCHRLVQDG
Trigger: GCCATCTTGGACAAGGCGGTGGCAGAAAGGAAAAGCTGCGGCTCACTTCCGGCCCTCCGCTGAAGCGGTTCGGTCTTCGGGCGGCAATTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR GCA 90 bp TTTCCTGAGCTGGATCCCAGTGTTGCCTTAACAGGGTGTCTGTCGTaGCGCAGTAGAGCACTGCTGCTTCCTCCAACCCCAAAATTTATG +
Preference number: 1 (lower is better)
Translates to: FPELDPSVALTGCLS*RSRALLLPPTPKFM
Trigger: CATAAATTTTGGGGTTGGAGGAAGCAGCAGTGCTCTACTGCGGCACGACAGACACCCTGTTAAGGCAACACTGGGATCCAGCTCAGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR TCA 90 bp ACAAGTGGCCAACATCCACACTGTAGGCTTGCAGGCTACCCGCCCTaGGATTTGGTAAAGAACACTGCCTTGTTCCCCATCAGTAAACAA +
Preference number: 1 (lower is better)
Translates to: TSGQHPHCRLAGYPP*DLVKNTALFPISKQ
Trigger: TTGTTTACTGATGGGGAACAAGGCAGTGTTCTTTACCAAATCTCAGGGCGGGTAGCCTGCAAGCCTACAGTGTGGATGTTGGCCACTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR GCA 90 bp AGTTGTGTATTTCACGACGAAAGCGACGGACCAAAAGAAATTTCCTaGCCCAAGAAGCATGGGATCCAGGAAGGGGCGCGTAGATGCTTA +
Preference number: 1 (lower is better)
Translates to: SCVFHDESDGPKEIS*PKKHGIQEGARRCL
Trigger: TAAGCATCTACGCGCCCCTTCCTGGATCCCATGCTTCTTGGGGCAGGAAATTTCTTTTGGTCCGTCGCTTTCGTCGTGAAATACACAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR TCA 90 bp GAGTTCAGGGCTACAATGGTGCAGGCTTCCTTTTGTTTCTCTTGGTaGGTCCACAAGAAGTTCTTACATACTGTCCAGAGAGGCCTCAGG +
Preference number: 1 (lower is better)
Translates to: EFRATMVQASFCFSW*VHKKFLHTVQRGLR
Trigger: CCTGAGGCCTCTCTGGACAGTATGTAAGAACTTCTTGTGGACTCACCAAGAGAAACAAAAGGAAGCCTGCACCATTGTAGCCCTGAACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR TCA 90 bp CAAGTTCCTCTCCTCATCATAACAAGGCGATTCAAACCTAAACTGTaGTTCTTAGGAGATGCTTCCAAGGGGAAGCTCCCTCGTTGGACA +
Preference number: 1 (lower is better)
Translates to: QVPLLIITRRFKPKL*FLGDASKGKLPRWT
Trigger: TGTCCAACGAGGGAGCTTCCCCTTGGAAGCATCTCCTAAGAATCACAGTTTAGGTTTGAATCGCCTTGTTATGATGAGGAGAGGAACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR CCA 90 bp AATATGCTCATGAACATCAGCAACAACCGTGCATTCCTTGGCAGATaGGATGCGATGGAAACCAAAGGTTTCCTTAAGGCAAGCACTTCA +
Preference number: 1 (lower is better)
Translates to: NMLMNISNNRAFLGR*DAMETKGFLKASTS
Trigger: TGAAGTGCTTGCCTTAAGGAAACCTTTGGTTTCCATCGCATCCCATCTGCCAAGGAATGCACGGTTGTTGCTGATGTTCATGAGCATATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR TCA 90 bp ACACATGGGTGGCACAACCTTAAAGAATGCTGCTTAGCTTTATTCTaGGGCTGCAGCAATTCTTCAGGCTTGTATTTGGAACTTTTTCCC +
Preference number: 1 (lower is better)
Translates to: THGWHNLKECCLALF*GCSNSSGLYLELFP
Trigger: GGGAAAAAGTTCCAAATACAAGCCTGAAGAATTGCTGCAGCCTCAGAATAAAGCTAAGCAGCATTCTTTAAGGTTGTGCCACCCATGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409658.7
3UTR GCA 90 bp ACAGCTGCAAAGCTTGAAGAACCCATTCATTACTCCGTTAATGTTTaGCACATCCAGTTATCTGTGAGGGTTTTAGTCCTATACTTTCCT +
Preference number: 1 (lower is better)
Translates to: TAAKLEEPIHYSVNV*HIQLSVRVLVLYFP
Trigger: AGGAAAGTATAGGACTAAAACCCTCACAGATAACTGGATGTGGCAAACATTAACGGAGTAATGAATGGGTTCTTCAAGCTTTGCAGCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409658.7
3UTR TCA 90 bp GTTTCTCAACTAACTCTAAAAACTCCCTTGAACTTTGGAATCCTATaGAGGACCAGCTGTGTAAACTCAATGTATGGGCATGACACTAAG +
Preference number: 1 (lower is better)
Translates to: VSQLTLKTPLNFGIL*RTSCVNSMYGHDTK
Trigger: CTTAGTGTCATGCCCATACATTGAGTTTACACAGCTGGTCCTTCATAGGATTCCAAAGTTCAAGGGAGTTTTTAGAGTTAGTTGAGAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409658.7
3UTR TCA 90 bp ATTATAAACAGGAGAGGGAAGAATCCAGTGAAGAAGCCCTTAAAGTaGATGTCGTCAGCTAACATAGGCATCTCATCAAAAGAAGACTTC +
Preference number: 1 (lower is better)
Translates to: IINRRGKNPVKKPLK*MSSANIGISSKEDF
Trigger: GAAGTCTTCTTTTGATGAGATGCCTATGTTAGCTGACGACATTCACTTTAAGGGCTTCTTCACTGGATTCTTCCCTCTCCTGTTTATAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409658.7
3UTR GCA 90 bp ACAGTGAATCAGAAGAAAAGTCCTAGAGTCTTCTTGACAATGATCTaGTTACAGCTGCAAAGCTTGAAGAACCCATTCATTACTCCGTTA +
Preference number: 1 (lower is better)
Translates to: TVNQKKSPRVFLTMI*LQLQSLKNPFITPL
Trigger: TAACGGAGTAATGAATGGGTTCTTCAAGCTTTGCAGCTGTAAGCAGATCATTGTCAAGAAGACTCTAGGACTTTTCTTCTGATTCACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409658.7
3UTR CCA 90 bp TATCTAAATCAAACCACAGTGTCAATATGTTGGGAACAAGTACCCTaGCTACAAGGAAGGAAAAGGAATACAGCCCTAAAAGATGCATAC +
Preference number: 1 (lower is better)
Translates to: YLNQTTVSICWEQVP*LQGRKRNTALKDAY
Trigger: GTATGCATCTTTTAGGGCTGTATTCCTTTTCCTTCCTTGTAGCCAGGGTACTTGTTCCCAACATATTGACACTGTGGTTTGATTTAGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409658.7
3UTR TCA 90 bp CTATCTTGTCGGTTAATTCATATTGTAAAAGGACTGCCAGGAGAATaGCGGCTATCTAAATCAAACCACAGTGTCAATATGTTGGGAACA +
Preference number: 1 (lower is better)
Translates to: LSCRLIHIVKGLPGE*RLSKSNHSVNMLGT
Trigger: TGTTCCCAACATATTGACACTGTGGTTTGATTTAGATAGCCGTCATTCTCCTGGCAGTCCTTTTACAATATGAATTAACCGACAAGATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409658.7
3UTR CCA 90 bp AGATCATCAAGTTTCTCAACTAACTCTAAAAACTCCCTTGAACTTTaGAATCCTATGAAGGACCAGCTGTGTAAACTCAATGTATGGGCA +
Preference number: 1 (lower is better)
Translates to: RSSSFSTNSKNSLEL*NPMKDQLCKLNVWA
Trigger: TGCCCATACATTGAGTTTACACAGCTGGTCCTTCATAGGATTCCAAAGTTCAAGGGAGTTTTTAGAGTTAGTTGAGAAACTTGATGATCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409658.7
3UTR TCA 90 bp ATACTGCTCCCAAAATTATCATCAGCTTCTGCCTCAGACACTTCATaGAATAAGCTGAAACAATGTGGGCTGTCTATTAAAAGACTGATT +
Preference number: 1 (lower is better)
Translates to: ILLPKLSSASASDTS*NKLKQCGLSIKRLI
Trigger: AATCAGTCTTTTAATAGACAGCCCACATTGTTTCAGCTTATTTCATGAAGTGTCTGAGGCAGAAGCTGATGATAATTTTGGGAGCAGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409658.7
3UTR CAA 90 bp GCGCGCAAGTTCGCGCTGCTCTGGTCACTGGGCTCGGCGCTGGCGTaGGCGGGAAGCGCGCTGCTGCGGGGCGGCGCGGCGTGCGGACGC +
Preference number: 2 (lower is better)
Translates to: ARKFALLWSLGSALA*AGSALLRGGAACGR
Trigger: GCGTCCGCACGCCGCGCCGCCCCGCAGCAGCGCGCTTCCCGCCAACGCCAGCGCCGAGCCCAGTGACCAGAGCAGCGCGAACTTGCGCGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR-3UTR GCA 90 bp CGCCGCAGGCCCTGCCCCTTTCGCCGTCGCCGACCAATTGCCGCCCGAAGACCGCGGCGTGCGGACGCCTaGTGCGCTGCGAAGAAGCGC +
Preference number: 2 (lower is better)
Translates to: RRRPCPFRRRRPIAARRPRRADA*CAAKKR
Trigger: GCGCTTCTTCGCAGCGCAGCAGGCGTCCGCACGCCG...CGGTCTTCGGGCGGCAATTGGTCGGCGACGGCGAAAGGGGCAGGGCCTGCGGCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR-3UTR CCA 90 bp CTTGGGGACACCACAAAAGTCCGCAGAGCAGGCACCGCGGCACTTCCGCGAGCGAGGTGGCCGCGCTGCTaGCCGCGCTGGTTGGGCTGC +
Preference number: 2 (lower is better)
Translates to: LGDTTKVRRAGTAALPRARWPRC*PRWLGC
Trigger: GCAGCCCAACCAGCGCGGCCAGCAGCGCGGCCACCT...CGCTCGCGGAAGTGCCGCGGTGCCTGCTCTGCGGACTTTTGTGGTGTCCCCAAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR-3UTR CCA 90 bp CTTGGGGACACCACAAAAGTCCGCAGAGCAGGCACCGCGGCACTTCCGCGAGCGTCGCGCCCTCGCCGCTaGGGAAGTACGCGGAGCCAG +
Preference number: 2 (lower is better)
Translates to: LGDTTKVRRAGTAALPRASRPRR*GSTRSQ
Trigger: CTGGCTCCGCGTACTTCCCCAGCGGCGAGGGCGCGA...CGCTCGCGGAAGTGCCGCGGTGCCTGCTCTGCGGACTTTTGTGGTGTCCCCAAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR CAA 90 bp CTGGCTGCACTGTGTTTCGGCCTAGCCGCGCTCTACGCACCGGTGTaGCTGCTGCGCGCGCGCAAGTTCGCGCTGCTCTGGTCACTGGGC +
Preference number: 2 (lower is better)
Translates to: LAALCFGLAALYAPV*LLRARKFALLWSLG
Trigger: GCCCAGTGACCAGAGCAGCGCGAACTTGCGCGCGCGCAGCAGCAACACCGGTGCGTAGAGCGCGGCTAGGCCGAAACACAGTGCAGCCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR CAA 90 bp GGAGGGCGACTGCAAGCGGACAGGCAGCACCTGCGACCACGGTACTaGGGGACACCACAAAAGTCCGCAGAGCAGGCACCGCGGCACTTC +
Preference number: 2 (lower is better)
Translates to: GGRLQADRQHLRPRY*GTPQKSAEQAPRHF
Trigger: GAAGTGCCGCGGTGCCTGCTCTGCGGACTTTTGTGGTGTCCCCAAGTACCGTGGTCGCAGGTGCTGCCTGTCCGCTTGCAGTCGCCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR CAA 90 bp CGGAGGGCCGGAAGTGAGCCGCAGCTTTTCCTTTCTGCCACCGCCTaGTCCAAGATGGCGGACCTCCACCGCCAGCTGCAGGAGTACCTG +
Preference number: 2 (lower is better)
Translates to: RRAGSEPQLFLSATA*SKMADLHRQLQEYL
Trigger: CAGGTACTCCTGCAGCTGGCGGTGGAGGTCCGCCATCTTGGACAAGGCGGTGGCAGAAAGGAAAAGCTGCGGCTCACTTCCGGCCCTCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR-3UTR CCA 90 bp CCTTTCGCCGTCGCCGACCAATTGCCGCCCGAAGACCGAACCGCTTCAGCGGAGGTGATCCCAGCTACTTaGGGTGGGGCTGAGGTGGGA +
Preference number: 2 (lower is better)
Translates to: PFAVADQLPPEDRTASAEVIPAT*GGAEVG
Trigger: TCCCACCTCAGCCCCACCCCAAGTAGCTGGGATCAC...CTCCGCTGAAGCGGTTCGGTCTTCGGGCGGCAATTGGTCGGCGACGGCGAAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR-3UTR GCA 90 bp GTGTTTCGGCCTAGCCGCGCTCTACGCACCGGTGTTGCTGCTGCGCGCGCGCAAGAAGTGAGCCGTGATTaGACCACTGCACTCCTGGCT +
Preference number: 2 (lower is better)
Translates to: VFRPSRALRTGVAAARAQEVSRD*TTALLA
Trigger: AGCCAGGAGTGCAGTGGTGCAATCACGGCTCACTTC...TTGCGCGCGCGCAGCAGCAACACCGGTGCGTAGAGCGCGGCTAGGCCGAAACAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR-3UTR GCA 90 bp GCGCAAGTTCGCGCTGCTCTGGTCACTGGGCTCGGCGCTGGCGTTGGCGGGAAGGCTGGATCCCAGTGTTaGCTTAACAGGGTGTCTGTC +
Preference number: 2 (lower is better)
Translates to: AQVRAALVTGLGAGVGGKAGSQC*LNRVSV
Trigger: GACAGACACCCTGTTAAGGCAACACTGGGATCCAGC...CTTCCCGCCAACGCCAGCGCCGAGCCCAGTGACCAGAGCAGCGCGAACTTGCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR-3UTR CCA 90 bp GTGTTTCGGCCTAGCCGCGCTCTACGCACCGGTGTTGCTGCTGCGCGCGCGCAAAGCGGCCAGGTACTGTaGCTCAGATCTGCAATCCCA +
Preference number: 2 (lower is better)
Translates to: VFRPSRALRTGVAAARAQSGQVL*LRSAIP
Trigger: TGGGATTGCAGATCTGAGCCACAGTACCTGGCCGCT...TTGCGCGCGCGCAGCAGCAACACCGGTGCGTAGAGCGCGGCTAGGCCGAAACAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR-3UTR GCA 90 bp GTGTTTCGGCCTAGCCGCGCTCTACGCACCGGTGTTGCTGCTGCGCGCGCGCAAGAAGGGGCGCGTAGATaGTTAACGGTCTCTTCGGAA +
Preference number: 2 (lower is better)
Translates to: VFRPSRALRTGVAAARAQEGARR*LTVSSE
Trigger: TTCCGAAGAGACCGTTAAGCATCTACGCGCCCCTTC...TTGCGCGCGCGCAGCAGCAACACCGGTGCGTAGAGCGCGGCTAGGCCGAAACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR-3UTR CCA 90 bp GCGCAAGTTCGCGCTGCTCTGGTCACTGGGCTCGGCGCTGGCGTTGGCGGGAAGGGGAAGCTCCCTCGTTaGACATCCAGAAGATTGCAT +
Preference number: 2 (lower is better)
Translates to: AQVRAALVTGLGAGVGGKGKLPR*TSRRLH
Trigger: ATGCAATCTTCTGGATGTCCAACGAGGGAGCTTCCC...CTTCCCGCCAACGCCAGCGCCGAGCCCAGTGACCAGAGCAGCGCGAACTTGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR-3UTR GCA 90 bp ACCACACCCACCCCTGCCTTCCAACTATTAATGCTGGCAGGACTTAGCCAGACCGACTGCACGCCGCTGTaGGGAAGCCCGTGGCGAAGG +
Preference number: 2 (lower is better)
Translates to: TTPTPAFQLLMLAGLSQTDCTPL*GSPWRR
Trigger: CCTTCGCCACGGGCTTCCGCACAGCGGCGTGCAGTC...GGTCTGGCTAAGTCCTGCCAGCATTAATAGTTGGAAGGCAGGGGTGGGTGTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR-3UTR GCA 90 bp ACCACACCCACCCCTGCCTTCCAACTATTAATGCTGGCAGGACTTAGCCAGACCCGTGCGGACGCCTGCTaGGCTGCGAAGAAGCGCCGT +
Preference number: 2 (lower is better)
Translates to: TTPTPAFQLLMLAGLSQTRADAC*AAKKRR
Trigger: ACGGCGCTTCTTCGCAGCGCAGCAGGCGTCCGCACG...GGTCTGGCTAAGTCCTGCCAGCATTAATAGTTGGAAGGCAGGGGTGGGTGTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR-3UTR TCA 90 bp CCTTTCGCCGTCGCCGACCAATTGCCGCCCGAAGACCGAACCGCTTCAGCGGAGCTATCTGGCTTACTGTaGGTTAGAAGTACGCCCTGC +
Preference number: 2 (lower is better)
Translates to: PFAVADQLPPEDRTASAELSGLL*VRSTPC
Trigger: GCAGGGCGTACTTCTAACTCACAGTAAGCCAGATAG...CTCCGCTGAAGCGGTTCGGTCTTCGGGCGGCAATTGGTCGGCGACGGCGAAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR-3UTR GCA 90 bp GCGCAAGTTCGCGCTGCTCTGGTCACTGGGCTCGGCGCTGGCGTTGGCGGGAAGTCAGGGCTACAATGGTaGAGGCTTCCTTTTGTTTCT +
Preference number: 2 (lower is better)
Translates to: AQVRAALVTGLGAGVGGKSGLQW*RLPFVS
Trigger: AGAAACAAAAGGAAGCCTGCACCATTGTAGCCCTGA...CTTCCCGCCAACGCCAGCGCCGAGCCCAGTGACCAGAGCAGCGCGAACTTGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR-3UTR GCA 90 bp GTGTTTCGGCCTAGCCGCGCTCTACGCACCGGTGTTGCTGCTGCGCGCGCGCAACCTTGGCAGATGGGATaGGATGGAAACCAAAGGTTT +
Preference number: 2 (lower is better)
Translates to: VFRPSRALRTGVAAARAQPWQMG*DGNQRF
Trigger: AAACCTTTGGTTTCCATCGCATCCCATCTGCCAAGG...TTGCGCGCGCGCAGCAGCAACACCGGTGCGTAGAGCGCGGCTAGGCCGAAACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR-3UTR GCA 90 bp CGCCGCAGGCCCTGCCCCTTTCGCCGTCGCCGACCAATTGCCGCCCGAAGACCGGGACATCCAGAAGATTaGATTTTCTCTTCAGAGTAC +
Preference number: 2 (lower is better)
Translates to: RRRPCPFRRRRPIAARRPGHPED*IFSSEY
Trigger: GTACTCTGAAGAGAAAATGCAATCTTCTGGATGTCC...CGGTCTTCGGGCGGCAATTGGTCGGCGACGGCGAAAGGGGCAGGGCCTGCGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR-3UTR GCA 90 bp CCTTTCGCCGTCGCCGACCAATTGCCGCCCGAAGACCGAACCGCTTCAGCGGAGGTGATTCTTAGGAGATaGTTCCAAGGGGAAGCTCCC +
Preference number: 2 (lower is better)
Translates to: PFAVADQLPPEDRTASAEVILRR*FQGEAP
Trigger: GGGAGCTTCCCCTTGGAAGCATCTCCTAAGAATCAC...CTCCGCTGAAGCGGTTCGGTCTTCGGGCGGCAATTGGTCGGCGACGGCGAAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR-3UTR TCA 90 bp CCTTTCGCCGTCGCCGACCAATTGCCGCCCGAAGACCGAACCGCTTCAGCGGAGTTTCTAAGCAACCATTaGAACTTCCAGCACCAGCGG +
Preference number: 2 (lower is better)
Translates to: PFAVADQLPPEDRTASAEFLSNH*NFQHQR
Trigger: CCGCTGGTGCTGGAAGTTTCAATGGTTGCTTAGAAA...CTCCGCTGAAGCGGTTCGGTCTTCGGGCGGCAATTGGTCGGCGACGGCGAAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR-3UTR TCA 90 bp CCTTTCGCCGTCGCCGACCAATTGCCGCCCGAAGACCGAACCGCTTCAGCGGAGTGCACATCAGTTACTTaGAGAGCCACACCTCAGATC +
Preference number: 2 (lower is better)
Translates to: PFAVADQLPPEDRTASAECTSVT*RATPQI
Trigger: GATCTGAGGTGTGGCTCTTCAAGTAACTGATGTGCA...CTCCGCTGAAGCGGTTCGGTCTTCGGGCGGCAATTGGTCGGCGACGGCGAAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR-3UTR CCA 90 bp GTGTTTCGGCCTAGCCGCGCTCTACGCACCGGTGTTGCTGCTGCGCGCGCGCAAGCAGATGGGATGCGATaGAAACCAAAGGTTTCCTTA +
Preference number: 2 (lower is better)
Translates to: VFRPSRALRTGVAAARAQADGMR*KPKVSL
Trigger: TAAGGAAACCTTTGGTTTCCATCGCATCCCATCTGC...TTGCGCGCGCGCAGCAGCAACACCGGTGCGTAGAGCGCGGCTAGGCCGAAACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR-3UTR CCA 90 bp GTGTTTCGGCCTAGCCGCGCTCTACGCACCGGTGTTGCTGCTGCGCGCGCGCAAATTTGCCAGATATGGTaGCACACAACTGTGATCCCA +
Preference number: 2 (lower is better)
Translates to: VFRPSRALRTGVAAARAQICQIW*HTTVIP
Trigger: TGGGATCACAGTTGTGTGCCACCATATCTGGCAAAT...TTGCGCGCGCGCAGCAGCAACACCGGTGCGTAGAGCGCGGCTAGGCCGAAACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR-3UTR TCA 90 bp GTGTTTCGGCCTAGCCGCGCTCTACGCACCGGTGTTGCTGCTGCGCGCGCGCAATTCACTCTCAAAATGTaGTCTGTCAAGTCCAGTAGA +
Preference number: 2 (lower is better)
Translates to: VFRPSRALRTGVAAARAQFTLKM*SVKSSR
Trigger: TCTACTGGACTTGACAGATCACATTTTGAGAGTGAA...TTGCGCGCGCGCAGCAGCAACACCGGTGCGTAGAGCGCGGCTAGGCCGAAACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR-3UTR CCA 90 bp GTGTTTCGGCCTAGCCGCGCTCTACGCACCGGTGTTGCTGCTGCGCGCGCGCAAACAAGGAATTTGCCATaGACAAGATCTATCTGGCTT +
Preference number: 2 (lower is better)
Translates to: VFRPSRALRTGVAAARAQTRNLP*TRSIWL
Trigger: AAGCCAGATAGATCTTGTCCATGGCAAATTCCTTGT...TTGCGCGCGCGCAGCAGCAACACCGGTGCGTAGAGCGCGGCTAGGCCGAAACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR-3UTR TCA 90 bp CCTTTCGCCGTCGCCGACCAATTGCCGCCCGAAGACCGAACCGCTTCAGCGGAGACACGCTCTGAAAACTaGGATTTTGTCATTGAACTG +
Preference number: 2 (lower is better)
Translates to: PFAVADQLPPEDRTASAETRSEN*DFVIEL
Trigger: CAGTTCAATGACAAAATCTCAGTTTTCAGAGCGTGT...CTCCGCTGAAGCGGTTCGGTCTTCGGGCGGCAATTGGTCGGCGACGGCGAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR-3UTR CCA 90 bp CTTGGGGACACCACAAAAGTCCGCAGAGCAGGCACCGCGGCACTTCCGCGAGCGAAAATTTGCCAGATATaGTGGCACACAACTGTGATC +
Preference number: 2 (lower is better)
Translates to: LGDTTKVRRAGTAALPRAKICQI*WHTTVI
Trigger: GATCACAGTTGTGTGCCACCATATCTGGCAAATTTT...CGCTCGCGGAAGTGCCGCGGTGCCTGCTCTGCGGACTTTTGTGGTGTCCCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR-3UTR TCA 90 bp CTTGGGGACACCACAAAAGTCCGCAGAGCAGGCACCGCGGCACTTCCGCGAGCGTGTTGCAAAATTGTTTaGGGACCTATTTTGGTCCAT +
Preference number: 2 (lower is better)
Translates to: LGDTTKVRRAGTAALPRACCKIV*GPILVH
Trigger: ATGGACCAAAATAGGTCCTCAAACAATTTTGCAACA...CGCTCGCGGAAGTGCCGCGGTGCCTGCTCTGCGGACTTTTGTGGTGTCCCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR-3UTR GCA 90 bp CTTGGGGACACCACAAAAGTCCGCAGAGCAGGCACCGCGGCACTTCCGCGAGCGTGTGATCTGGTTATCTaGTTACTGAGATACTATGTT +
Preference number: 2 (lower is better)
Translates to: LGDTTKVRRAGTAALPRACDLVI*LLRYYV
Trigger: AACATAGTATCTCAGTAAGCAGATAACCAGATCACA...CGCTCGCGGAAGTGCCGCGGTGCCTGCTCTGCGGACTTTTGTGGTGTCCCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR-3UTR CCA 90 bp ACACAAGTGGCCAACATCCACACTGTAGGCTTGCAGGCTACCCGCCCTGAGATTAAACAACATGGGAGTTaGGGCAATGAGGGTGGACAG +
Preference number: 2 (lower is better)
Translates to: TQVANIHTVGLQATRPEIKQHGS*GNEGGQ
Trigger: CTGTCCACCCTCATTGCCCCAACTCCCATGTTGTTT...AATCTCAGGGCGGGTAGCCTGCAAGCCTACAGTGTGGATGTTGGCCACTTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR-3UTR CCA 90 bp AAGAAACAAGAGAGATTCTGTGTACCCTTTACCCATTCCTCCATGTTGCAAAACCGCTGTTCGCCGCGCTaGGCCTTCGCAGCACGCTGC +
Preference number: 2 (lower is better)
Translates to: KKQERFCVPFTHSSMLQNRCSPR*AFAARC
Trigger: GCAGCGTGCTGCGAAGGCCCAGCGCGGCGAACAGCG...GTTTTGCAACATGGAGGAATGGGTAAAGGGTACACAGAATCTCTCTTGTTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR-3UTR TCA 90 bp ACCACACCCACCCCTGCCTTCCAACTATTAATGCTGGCAGGACTTAGCCAGACCACTTGGCACACGCTCTaGAAACTGAGATTTTGTCAT +
Preference number: 2 (lower is better)
Translates to: TTPTPAFQLLMLAGLSQTTWHTL*KLRFCH
Trigger: ATGACAAAATCTCAGTTTTCAGAGCGTGTGCCAAGT...GGTCTGGCTAAGTCCTGCCAGCATTAATAGTTGGAAGGCAGGGGTGGGTGTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR-3UTR GCA 90 bp AAGAAACAAGAGAGATTCTGTGTACCCTTTACCCATTCCTCCATGTTGCAAAACTCTACGCACCGGTGTTaGTGCTGCGCGCGCGCAAGT +
Preference number: 2 (lower is better)
Translates to: KKQERFCVPFTHSSMLQNSTHRC*CCARAS
Trigger: ACTTGCGCGCGCGCAGCAGCAACACCGGTGCGTAGA...GTTTTGCAACATGGAGGAATGGGTAAAGGGTACACAGAATCTCTCTTGTTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR-3UTR CCA 90 bp TCTAAGCAACCATTGAAACTTCCAGCACCAGCGGCCAGGTACTGTGGCTCAGATGCATTCCTTGGCAGATaGGATGCGATGGAAACCAAA +
Preference number: 2 (lower is better)
Translates to: SKQPLKLPAPAARYCGSDAFLGR*DAMETK
Trigger: TTTGGTTTCCATCGCATCCCATCTGCCAAGGAATGC...ATCTGAGCCACAGTACCTGGCCGCTGGTGCTGGAAGTTTCAATGGTTGCTTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR-3UTR GCA 90 bp ACACAAGTGGCCAACATCCACACTGTAGGCTTGCAGGCTACCCGCCCTGAGATTTTAAATTTGTGGAGATaGCCCATGTCTTGTGAGACT +
Preference number: 2 (lower is better)
Translates to: TQVANIHTVGLQATRPEILNLWR*PMSCET
Trigger: AGTCTCACAAGACATGGGGCATCTCCACAAATTTAA...AATCTCAGGGCGGGTAGCCTGCAAGCCTACAGTGTGGATGTTGGCCACTTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR CAA 90 bp GGTGCCCAGAAAAGAGTTCAGGGCTACAATGGTGCAGGCTTCCTTTaGTTTCTCTTGGTGAGTCCACAAGAAGTTCTTACATACTGTCCA +
Preference number: 2 (lower is better)
Translates to: GAQKRVQGYNGAGFL*FLLVSPQEVLTYCP
Trigger: TGGACAGTATGTAAGAACTTCTTGTGGACTCACCAAGAGAAACAAAAGGAAGCCTGCACCATTGTAGCCCTGAACTCTTTTCTGGGCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR-3UTR CCA 90 bp TCTAAGCAACCATTGAAACTTCCAGCACCAGCGGCCAGGTACTGTGGCTCAGATAGGAACTTAAATTTGTaGAGATGCCCCATGTCTTGT +
Preference number: 2 (lower is better)
Translates to: SKQPLKLPAPAARYCGSDRNLNL*RCPMSC
Trigger: ACAAGACATGGGGCATCTCCACAAATTTAAGTTCCT...ATCTGAGCCACAGTACCTGGCCGCTGGTGCTGGAAGTTTCAATGGTTGCTTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR CAA 90 bp AAAAGAGTTCAGGGCTACAATGGTGCAGGCTTCCTTTTGTTTCTCTaGGTGAGTCCACAAGAAGTTCTTACATACTGTCCAGAGAGGCCT +
Preference number: 2 (lower is better)
Translates to: KRVQGYNGAGFLLFL*VSPQEVLTYCPERP
Trigger: AGGCCTCTCTGGACAGTATGTAAGAACTTCTTGTGGACTCACCAAGAGAAACAAAAGGAAGCCTGCACCATTGTAGCCCTGAACTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR-3UTR CCA 90 bp TCTAAGCAACCATTGAAACTTCCAGCACCAGCGGCCAGGTACTGTGGCTCAGATGCTTCCAATCCAAACTaGGCTAAATGGTATGTTTAT +
Preference number: 2 (lower is better)
Translates to: SKQPLKLPAPAARYCGSDASNPN*AKWYVY
Trigger: ATAAACATACCATTTAGCCCAGTTTGGATTGGAAGC...ATCTGAGCCACAGTACCTGGCCGCTGGTGCTGGAAGTTTCAATGGTTGCTTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR CAA 90 bp TCATATCCTGTTAAACTATATCAGTATGCCTTTTCTAAGCAACCATaGAAACTTCCAGCACCAGCGGCCAGGTACTGTGGCTCAGATCTG +
Preference number: 2 (lower is better)
Translates to: SYPVKLYQYAFSKQP*KLPAPAARYCGSDL
Trigger: CAGATCTGAGCCACAGTACCTGGCCGCTGGTGCTGGAAGTTTCAATGGTTGCTTAGAAAAGGCATACTGATATAGTTTAACAGGATATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR-3UTR TCA 90 bp CTGTATCTGGTGGAAACCATGGATTTCTACAAGCTCGAATTATTCCTCATTGTAGCAGGCTACCCGCCCTaGGATTTGGTAAAGAACACT +
Preference number: 2 (lower is better)
Translates to: LYLVETMDFYKLELFLIVAGYPP*DLVKNT
Trigger: AGTGTTCTTTACCAAATCTCAGGGCGGGTAGCCTGC...TACAATGAGGAATAATTCGAGCTTGTAGAAATCCATGGTTTCCACCAGATACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR-3UTR GCA 90 bp GCCAGAAGGTATGAGCCTAACATTCTGATGAGTCCAGAAAACTACGTTTTGTCAGTTAGAAGTACGCCCTaGCGTAACACTGGTATTTCC +
Preference number: 2 (lower is better)
Translates to: ARRYEPNILMSPENYVLSVRSTP*RNTGIS
Trigger: GGAAATACCAGTGTTACGGCAGGGCGTACTTCTAAC...TGACAAAACGTAGTTTTCTGGACTCATCAGAATGTTAGGCTCATACCTTCTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR-3UTR CCA 90 bp CTGTATCTGGTGGAAACCATGGATTTCTACAAGCTCGAATTATTCCTCATTGTACAACCGTGCATTCCTTaGCAGATGGGATGCGATGGA +
Preference number: 2 (lower is better)
Translates to: LYLVETMDFYKLELFLIVQPCIP*QMGCDG
Trigger: TCCATCGCATCCCATCTGCCAAGGAATGCACGGTTG...TACAATGAGGAATAATTCGAGCTTGTAGAAATCCATGGTTTCCACCAGATACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR-3UTR TCA 90 bp AAGAAACAAGAGAGATTCTGTGTACCCTTTACCCATTCCTCCATGTTGCAAAACCCAGTTGGGGGTGAGTaGAGAAATACCCATAACCTA +
Preference number: 2 (lower is better)
Translates to: KKQERFCVPFTHSSMLQNPVGGE*RNTHNL
Trigger: TAGGTTATGGGTATTTCTTCACTCACCCCCAACTGG...GTTTTGCAACATGGAGGAATGGGTAAAGGGTACACAGAATCTCTCTTGTTTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR-3UTR TCA 90 bp CAGGGCAGTGTTTTCACAATGTATGTTCCAACAATACAGTGCATAGAATCATGGGTTTCTTTCCCAGTCTaGGAGCCTTCAGTCCTTTCA +
Preference number: 2 (lower is better)
Translates to: QGSVFTMYVPTIQCIESWVSFPV*EPSVLS
Trigger: TGAAAGGACTGAAGGCTCTCAGACTGGGAAAGAAAC...CCATGATTCTATGCACTGTATTGTTGGAACATACATTGTGAAAACACTGCCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393006.5
3UTR-3UTR GCA 90 bp CTGTATCTGGTGGAAACCATGGATTTCTACAAGCTCGAATTATTCCTCATTGTATTCCTGGGATTCAGGTaGCCAGAAAAGAGTTCAGGG +
Preference number: 2 (lower is better)
Translates to: LYLVETMDFYKLELFLIVFLGFR*PEKSSG
Trigger: CCCTGAACTCTTTTCTGGGCACCTGAATCCCAGGAA...TACAATGAGGAATAATTCGAGCTTGTAGAAATCCATGGTTTCCACCAGATACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR-3UTR CCA 90 bp TCTAAAGGGCATGTGACTTTATTTCTGACTAACATCAAGTTCCTCTCCTCATCACTCATTGAGGGTTCCTaGGATTCAGGTGCCCAGAAA +
Preference number: 2 (lower is better)
Translates to: SKGHVTLFLTNIKFLSSSLIEGS*DSGAQK
Trigger: TTTCTGGGCACCTGAATCCCAGGAACCCTCAATGAG...TGATGAGGAGAGGAACTTGATGTTAGTCAGAAATAAAGTCACATGCCCTTTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR-3UTR CCA 90 bp AAGAAACAAGAGAGATTCTGTGTACCCTTTACCCATTCCTCCATGTTGCAAAACAATGCAGTCAGAACCTaGGAAGTAGGTCCCAGACAT +
Preference number: 2 (lower is better)
Translates to: KKQERFCVPFTHSSMLQNNAVRT*EVGPRH
Trigger: ATGTCTGGGACCTACTTCCCAGGTTCTGACTGCATT...GTTTTGCAACATGGAGGAATGGGTAAAGGGTACACAGAATCTCTCTTGTTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR-3UTR CCA 90 bp TATGAGTACCCATGGCCCATAGCCAGATACTCCAGTTGGACAGAGGATTTAAGAATCTGTGGGAGAATTTaGTCACGAGTCTTCTTTTCT +
Preference number: 2 (lower is better)
Translates to: YEYPWPIARYSSWTEDLRICGRI*SRVFFS
Trigger: AGAAAAGAAGACTCGTGACCAAATTCTCCCACAGAT...TCTTAAATCCTCTGTCCAACTGGAGTATCTGGCTATGGGCCATGGGTACTCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393006.5
3UTR-3UTR CCA 90 bp AAGCTGAAACAATGTGGGCTGTCTATTAAAAGACTGATTGCTAAACATCCCTACCCTCCCACACATGGGTaGCACAACCTTAAAGAATGC +
Preference number: 2 (lower is better)
Translates to: KLKQCGLSIKRLIAKHPYPPTHG*HNLKEC
Trigger: GCATTCTTTAAGGTTGTGCCACCCATGTGTGGGAGG...GTAGGGATGTTTAGCAATCAGTCTTTTAATAGACAGCCCACATTGTTTCAGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409658.7
3UTR CAA 90 bp AGTCCTAGAGTCTTCTTGACAATGATCTGCTTACAGCTGCAAAGCTaGAAGAACCCATTCATTACTCCGTTAATGTTTGCCACATCCAGT +
Preference number: 2 (lower is better)
Translates to: SPRVFLTMICLQLQS*KNPFITPLMFATSS
Trigger: ACTGGATGTGGCAAACATTAACGGAGTAATGAATGGGTTCTTCAAGCTTTGCAGCTGTAAGCAGATCATTGTCAAGAAGACTCTAGGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409658.7
3UTR-3UTR TCA 90 bp CAAGCCGGCCATGTAGTACAAATGTGGTGTACTGAAAAACCAACTGCTTTCAAATACAGCTGCAAAGCTTaGAGAACCCATTCATTACTC +
Preference number: 2 (lower is better)
Translates to: QAGHVVQMWCTEKPTAFKYSCKA*RTHSLL
Trigger: GAGTAATGAATGGGTTCTTCAAGCTTTGCAGCTGTA...TTTGAAAGCAGTTGGTTTTTCAGTACACCACATTTGTACTACATGGCCGGCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409658.7
3UTR-3UTR TCA 90 bp AGTGTCAATATGTTGGGAACAAGTACCCTGGCTACAAGGAAGGAAAAGGAATACTGCTTAGCTTTATTCTaGGGCTGCAGCAATTCTTCA +
Preference number: 2 (lower is better)
Translates to: SVNMLGTSTLATRKEKEYCLALF*GCSNSS
Trigger: TGAAGAATTGCTGCAGCCTCAGAATAAAGCTAAGCA...GTATTCCTTTTCCTTCCTTGTAGCCAGGGTACTTGTTCCCAACATATTGACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409658.7
3UTR-3UTR TCA 90 bp CAAGCCGGCCATGTAGTACAAATGTGGTGTACTGAAAAACCAACTGCTTTCAAAAACTTTGGAATCCTATaGAGGACCAGCTGTGTAAAC +
Preference number: 2 (lower is better)
Translates to: QAGHVVQMWCTEKPTAFKNFGIL*RTSCVN
Trigger: GTTTACACAGCTGGTCCTTCATAGGATTCCAAAGTT...TTTGAAAGCAGTTGGTTTTTCAGTACACCACATTTGTACTACATGGCCGGCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000409658.7
3UTR CAA 90 bp CAATTCTTTGATATTAACACCAATATCATAGAGAACATCAGCCATTaGTCTGAGACGGGAGATACCAGTGTCCCACACATGCAGAAAGCA +
Preference number: 2 (lower is better)
Translates to: QFFDINTNIIENISH*SETGDTSVPHMQKA
Trigger: TGCTTTCTGCATGTGTGGGACACTGGTATCTCCCGTCTCAGACAAATGGCTGATGTTCTCTATGATATTGGTGTTAATATCAAAGAATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393006.5
3UTR-3UTR GCA 90 bp AGTGTCAATATGTTGGGAACAAGTACCCTGGCTACAAGGAAGGAAAAGGAATACTACTCCGTTAATGTTTaGCACATCCAGTTATCTGTG +
Preference number: 2 (lower is better)
Translates to: SVNMLGTSTLATRKEKEYYSVNV*HIQLSV
Trigger: CACAGATAACTGGATGTGGCAAACATTAACGGAGTA...GTATTCCTTTTCCTTCCTTGTAGCCAGGGTACTTGTTCCCAACATATTGACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409658.7
3UTR-3UTR CCA 90 bp GCCAGAAGGTATGAGCCTAACATTCTGATGAGTCCAGAAAACTACGTTTTGTCAATCTTGATATGGGTTTaGTCTCTGGATCCGGTTTTA +
Preference number: 2 (lower is better)
Translates to: ARRYEPNILMSPENYVLSILIWV*SLDPVL
Trigger: TAAAACCGGATCCAGAGACCAAACCCATATCAAGAT...TGACAAAACGTAGTTTTCTGGACTCATCAGAATGTTAGGCTCATACCTTCTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR-3UTR CCA 90 bp AATAAAAACACTGTGCTGCATTATAAACAGGAGAGGGAAGAATCCAGTGAAGAATTCCTTTGGAAGTCGTaGCATAACCAAGCCAACCAG +
Preference number: 2 (lower is better)
Translates to: NKNTVLHYKQEREESSEEFLWKS*HNQANQ
Trigger: CTGGTTGGCTTGGTTATGCCACGACTTCCAAAGGAA...TTCTTCACTGGATTCTTCCCTCTCCTGTTTATAATGCAGCACAGTGTTTTTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409658.7
3UTR CAA 90 bp GTGATGTTATCAACAGTGAATCAGAAGAAAAGTCCTAGAGTCTTCTaGACAATGATCTGCTTACAGCTGCAAAGCTTGAAGAACCCATTC +
Preference number: 2 (lower is better)
Translates to: VMLSTVNQKKSPRVF*TMICLQLQSLKNPF
Trigger: GAATGGGTTCTTCAAGCTTTGCAGCTGTAAGCAGATCATTGTCAAGAAGACTCTAGGACTTTTCTTCTGATTCACTGTTGATAACATCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409658.7
3UTR-3UTR TCA 90 bp CTGTATCTGGTGGAAACCATGGATTTCTACAAGCTCGAATTATTCCTCATTGTATGGTTAATATGCTCATaGACATCAGCAACAACCGTG +
Preference number: 2 (lower is better)
Translates to: LYLVETMDFYKLELFLIVWLICS*TSATTV
Trigger: CACGGTTGTTGCTGATGTTCATGAGCATATTAACCA...TACAATGAGGAATAATTCGAGCTTGTAGAAATCCATGGTTTCCACCAGATACAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR-3UTR TCA 90 bp GTTTTGCTGAAACTTACATATCAGGCTGCTGTTAAACTCTTTTACAATAACGTGAATAAAGAGAAGCCATaGCTGAAGCCCCTGGTAAGG +
Preference number: 2 (lower is better)
Translates to: VLLKLTYQAAVKLFYNNVNKEKP*LKPLVR
Trigger: CCTTACCAGGGGCTTCAGTCATGGCTTCTCTTTATT...CACGTTATTGTAAAAGAGTTTAACAGCAGCCTGATATGTAAGTTTCAGCAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393006.5
3UTR-3UTR TCA 90 bp AAGAAACAAGAGAGATTCTGTGTACCCTTTACCCATTCCTCCATGTTGCAAAACGTCACAAAAATGGTGTaGCAGAATGTGTTGAAAAAC +
Preference number: 2 (lower is better)
Translates to: KKQERFCVPFTHSSMLQNVTKMV*QNVLKN
Trigger: GTTTTTCAACACATTCTGTCACACCATTTTTGTGAC...GTTTTGCAACATGGAGGAATGGGTAAAGGGTACACAGAATCTCTCTTGTTTCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR-3UTR GCA 90 bp TGGAGGTGTAAGCCAGTATTGTGGTTTTGTGATGATTTAACCACAAATGTCTTCTTCTTGACAATGATCTaGTTACAGCTGCAAAGCTTG +
Preference number: 2 (lower is better)
Translates to: WRCKPVLWFCDDLTTNVFFLTMI*LQLQSL
Trigger: CAAGCTTTGCAGCTGTAAGCAGATCATTGTCAAGAA...GAAGACATTTGTGGTTAAATCATCACAAAACCACAATACTGGCTTACACCTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409658.7
3UTR-3UTR GCA 90 bp GGCTATCTAAATCAAACCACAGTGTCAATATGTTGGGAACAAGTACCCTGGCTACTATTCCATGAATGTTaGACCTTTGAGGAAAACTTT +
Preference number: 2 (lower is better)
Translates to: GYLNQTTVSICWEQVPWLLFHEC*TFEENF
Trigger: AAAGTTTTCCTCAAAGGTGCAACATTCATGGAATAG...TAGCCAGGGTACTTGTTCCCAACATATTGACACTGTGGTTTGATTTAGATAGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409658.7
3UTR-3UTR CCA 90 bp AAGAAACAAGAGAGATTCTGTGTACCCTTTACCCATTCCTCCATGTTGCAAAACAATACCTGTATCTGGTaGAAACCATGGATTTCTACA +
Preference number: 2 (lower is better)
Translates to: KKQERFCVPFTHSSMLQNNTCIW*KPWIST
Trigger: TGTAGAAATCCATGGTTTCCACCAGATACAGGTATT...GTTTTGCAACATGGAGGAATGGGTAAAGGGTACACAGAATCTCTCTTGTTTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR CAA 90 bp ATCTGGTGGAAACCATGGATTTCTACAAGCTCGAATTATTCCTCATaGTATAGCCTGCTTTGTAAACTAGTTTACAATTTGCAGGCTGAT +
Preference number: 2 (lower is better)
Translates to: IWWKPWISTSSNYSS*YSLLCKLVYNLQAD
Trigger: ATCAGCCTGCAAATTGTAAACTAGTTTACAAAGCAGGCTATACAATGAGGAATAATTCGAGCTTGTAGAAATCCATGGTTTCCACCAGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR-3UTR GCA 90 bp CTGTATCTGGTGGAAACCATGGATTTCTACAAGCTCGAATTATTCCTCATTGTAATATCTAATTGCTGCTaGCTTCATTTTAGGTTCAGC +
Preference number: 2 (lower is better)
Translates to: LYLVETMDFYKLELFLIVISNCC*LHFRFS
Trigger: GCTGAACCTAAAATGAAGGCAGCAGCAATTAGATAT...TACAATGAGGAATAATTCGAGCTTGTAGAAATCCATGGTTTCCACCAGATACAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR-3UTR CCA 90 bp CAGGGCAGTGTTTTCACAATGTATGTTCCAACAATACAGTGCATAGAATCATGGATTATTACAAATCTGTaGGAGAATTTGGTCACGAGT +
Preference number: 2 (lower is better)
Translates to: QGSVFTMYVPTIQCIESWIITNL*ENLVTS
Trigger: ACTCGTGACCAAATTCTCCCACAGATTTGTAATAAT...CCATGATTCTATGCACTGTATTGTTGGAACATACATTGTGAAAACACTGCCCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393006.5
3UTR-3UTR CCA 90 bp TCTCATCAAAAGAAGACTTCAACAGAGCAGTTGTTTGAGTTTTCAATCATCAGTAACTCCCTTGAACTTTaGAATCCTATGAAGGACCAG +
Preference number: 2 (lower is better)
Translates to: SHQKKTSTEQLFEFSIISNSLEL*NPMKDQ
Trigger: CTGGTCCTTCATAGGATTCCAAAGTTCAAGGGAGTT...ACTGATGATTGAAAACTCAAACAACTGCTCTGTTGAAGTCTTCTTTTGATGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409658.7
3UTR CAA 90 bp CACAGCATCAACTGTAATTTGAATCTATGTTTTGCCAGAATCTTCTaGGGTATATTCACAGAAGTTGGTAAATGTGGCTCCCTAAACTTT +
Preference number: 2 (lower is better)
Translates to: HSINCNLNLCFARIF*GIFTEVGKCGSLNF
Trigger: AAAGTTTAGGGAGCCACATTTACCAACTTCTGTGAATATACCCAAGAAGATTCTGGCAAAACATAGATTCAAATTACAGTTGATGCTGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393006.5
3UTR-3UTR TCA 90 bp GTTTTGCTGAAACTTACATATCAGGCTGCTGTTAAACTCTTTTACAATAACGTGCAAGGTAGAGGTGAATaGACAAGTTCACTTTCAGTT +
Preference number: 2 (lower is better)
Translates to: VLLKLTYQAAVKLFYNNVQGRGE*TSSLSV
Trigger: AACTGAAAGTGAACTTGTTCATTCACCTCTACCTTG...CACGTTATTGTAAAAGAGTTTAACAGCAGCCTGATATGTAAGTTTCAGCAAAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393006.5
3UTR-3UTR GCA 90 bp AATAAAAACACTGTGCTGCATTATAAACAGGAGAGGGAAGAATCCAGTGAAGAAATTATCATCAGCTTCTaGCTCAGACACTTCATGAAA +
Preference number: 2 (lower is better)
Translates to: NKNTVLHYKQEREESSEEIIISF*LRHFMK
Trigger: TTTCATGAAGTGTCTGAGGCAGAAGCTGATGATAAT...TTCTTCACTGGATTCTTCCCTCTCCTGTTTATAATGCAGCACAGTGTTTTTATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409658.7
3UTR CAA 90 bp TTCAAAAATAGTAACACTAAGAAGTGTAGCTTTGATACCTCTATCTaGTCGGTTAATTCATATTGTAAAAGGACTGCCAGGAGAATGACG +
Preference number: 2 (lower is better)
Translates to: FKNSNTKKCSFDTSI*SVNSYCKRTARRMT
Trigger: CGTCATTCTCCTGGCAGTCCTTTTACAATATGAATTAACCGACAAGATAGAGGTATCAAAGCTACACTTCTTAGTGTTACTATTTTTGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409658.7
3UTR TCA 72 bp CGGAGCCAGCGCCGTCGGAGACCGCGCCGGCCGAGCTaGGGACTGCACGCCGCTGTGCGGAAGCCCGTGGCG +
Preference number: 3 (lower is better)
Translates to: RSQRRRRPRRPS*GLHAAVRKPVA
Trigger: CGCCACGGGCTTCCGCACAGCGGCGTGCAGTCCTCAGCTCGGCCGGCGCGGTCTCCGACGGCGCTGGCTCCG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR TCA 72 bp GGCCGCGGCGCCGGCCTCGCCAAGGTGCTGCCCGTGTaGGGACCTCGCGCCCTCGCCGCTGGGGAAGTACGC +
Preference number: 3 (lower is better)
Translates to: GRGAGLAKVLPV*GPRALAAGEVR
Trigger: GCGTACTTCCCCAGCGGCGAGGGCGCGAGGTCCTCACACGGGCAGCACCTTGGCGAGGCCGGCGCCGCGGCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR GCA 72 bp CCACGCTGTTCGCCGCGCTGGGCCTTCGCAGCACGCTaGTCACGGTGCTGGGCGCGGGCGCGCAGGTGGCCG +
Preference number: 3 (lower is better)
Translates to: PRCSPRWAFAAR*SRCWARARRWP
Trigger: CGGCCACCTGCGCGCCCGCGCCCAGCACCGTGAGCAGCGTGCTGCGAAGGCCCAGCGCGGCGAACAGCGTGG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR CCA 72 bp TCGCGCTGCTCTGGTCACTGGGCTCGGCGCTGGCGTTaGCGGGAAGCGCGCTGCTGCGGGGCGGCGCGGCGT +
Preference number: 3 (lower is better)
Translates to: SRCSGHWARRWR*REARCCGAARR
Trigger: ACGCCGCGCCGCCCCGCAGCAGCGCGCTTCCCGCCAACGCCAGCGCCGAGCCCAGTGACCAGAGCAGCGCGA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR GCA 72 bp AGCGCCGTCGGAGACCGCGCCGGCCGAGCTGAGGACTaGACGCCGCTGTGCGGAAGCCCGTGGCGAAGGCCC +
Preference number: 3 (lower is better)
Translates to: SAVGDRAGRAED*TPLCGSPWRRP
Trigger: GGGCCTTCGCCACGGGCTTCCGCACAGCGGCGTGCAGTCCTCAGCTCGGCCGGCGCGGTCTCCGACGGCGCT
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR CCA 72 bp CGCCGTCCCGGCCCGCGCTGCTCTACATGGCAGCGCTaGGCGCCACGCTGTTCGCCGCGCTGGGCCTTCGCA +
Preference number: 3 (lower is better)
Translates to: RRPGPRCSTWQR*APRCSPRWAFA
Trigger: TGCGAAGGCCCAGCGCGGCGAACAGCGTGGCGCCCAGCGCTGCCATGTAGAGCAGCGCGGGCCGGGACGGCG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR GCA 72 bp CAGGCACCGCGGCACTTCCGCGAGCGCCGCAGGCCCTaGCCCTTTCGCCGTCGCCGACCAATTGCCGCCCGA +
Preference number: 3 (lower is better)
Translates to: QAPRHFRERRRP*PFRRRRPIAAR
Trigger: TCGGGCGGCAATTGGTCGGCGACGGCGAAAGGGGCAGGGCCTGCGGCGCTCGCGGAAGTGCCGCGGTGCCTG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR CCA 72 bp GCGAAGAAGCGCCGTCCCGGCCCGCGCTGCTCTACATaGCAGCGCTGGGCGCCACGCTGTTCGCCGCGCTGG +
Preference number: 3 (lower is better)
Translates to: AKKRRPGPRCST*QRWAPRCSPRW
Trigger: CCAGCGCGGCGAACAGCGTGGCGCCCAGCGCTGCCATGTAGAGCAGCGCGGGCCGGGACGGCGCTTCTTCGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR CCA 72 bp GCAAGTTCGCGCTGCTCTGGTCACTGGGCTCGGCGCTaGCGTTGGCGGGAAGCGCGCTGCTGCGGGGCGGCG +
Preference number: 3 (lower is better)
Translates to: ASSRCSGHWARR*RWREARCCGAA
Trigger: CGCCGCCCCGCAGCAGCGCGCTTCCCGCCAACGCCAGCGCCGAGCCCAGTGACCAGAGCAGCGCGAACTTGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR GCA 72 bp GACCGCGCCGGCCGAGCTGAGGACTGCACGCCGCTGTaGGGAAGCCCGTGGCGAAGGCCCTGCCCTAACAGC +
Preference number: 3 (lower is better)
Translates to: DRAGRAEDCTPL*GSPWRRPCPNS
Trigger: GCTGTTAGGGCAGGGCCTTCGCCACGGGCTTCCGCACAGCGGCGTGCAGTCCTCAGCTCGGCCGGCGCGGTC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR CCA 72 bp ACATGGCAGCGCTGGGCGCCACGCTGTTCGCCGCGCTaGGCCTTCGCAGCACGCTGCTCACGGTGCTGGGCG +
Preference number: 3 (lower is better)
Translates to: TWQRWAPRCSPR*AFAARCSRCWA
Trigger: CGCCCAGCACCGTGAGCAGCGTGCTGCGAAGGCCCAGCGCGGCGAACAGCGTGGCGCCCAGCGCTGCCATGT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR CCA 72 bp TGCTGCGCGCGCGCAAGTTCGCGCTGCTCTGGTCACTaGGCTCGGCGCTGGCGTTGGCGGGAAGCGCGCTGC +
Preference number: 3 (lower is better)
Translates to: CCARASSRCSGH*ARRWRWREARC
Trigger: GCAGCGCGCTTCCCGCCAACGCCAGCGCCGAGCCCAGTGACCAGAGCAGCGCGAACTTGCGCGCGCGCAGCA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR GCA 72 bp TGCTGCGCTGCGAAGAAGCGCCGTCCCGGCCCGCGCTaGTCTACATGGCAGCGCTGGGCGCCACGCTGTTCG +
Preference number: 3 (lower is better)
Translates to: CCAAKKRRPGPR*STWQRWAPRCS
Trigger: CGAACAGCGTGGCGCCCAGCGCTGCCATGTAGAGCAGCGCGGGCCGGGACGGCGCTTCTTCGCAGCGCAGCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR GCA 72 bp CACCGGTGTTGCTGCTGCGCGCGCGCAAGTTCGCGCTaGTCTGGTCACTGGGCTCGGCGCTGGCGTTGGCGG +
Preference number: 3 (lower is better)
Translates to: HRCCCCARASSR*SGHWARRWRWR
Trigger: CCGCCAACGCCAGCGCCGAGCCCAGTGACCAGAGCAGCGCGAACTTGCGCGCGCGCAGCAGCAACACCGGTG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR GCA 72 bp CCGCAGGCCCTGCCCCTTTCGCCGTCGCCGACCAATTaGCGCCCGAAGACCGAACCGCTTCAGCGGAGGGCC +
Preference number: 3 (lower is better)
Translates to: PQALPLSPSPTN*RPKTEPLQRRA
Trigger: GGCCCTCCGCTGAAGCGGTTCGGTCTTCGGGCGGCAATTGGTCGGCGACGGCGAAAGGGGCAGGGCCTGCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR CCA 72 bp GTGTTGCTGCTGCGCGCGCGCAAGTTCGCGCTGCTCTaGTCACTGGGCTCGGCGCTGGCGTTGGCGGGAAGC +
Preference number: 3 (lower is better)
Translates to: VLLLRARKFALL*SLGSALALAGS
Trigger: GCTTCCCGCCAACGCCAGCGCCGAGCCCAGTGACCAGAGCAGCGCGAACTTGCGCGCGCGCAGCAGCAACAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR-3UTR CAA 90 bp GTGTTTCGGCCTAGCCGCGCTCTACGCACCGGTGTTGCTGCTGCGCGCGCGCAAATCCACACTGTAGGCTaGCAGGCTACCCGCCCTGAG +
Preference number: 3 (lower is better)
Translates to: VFRPSRALRTGVAAARAQIHTVG*QATRPE
Trigger: CTCAGGGCGGGTAGCCTGCAAGCCTACAGTGTGGAT...TTGCGCGCGCGCAGCAGCAACACCGGTGCGTAGAGCGCGGCTAGGCCGAAACAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR GCA 72 bp CGCTGGGAGGGCGACTGCAAGCGGACAGGCAGCACCTaGGACCACGGTACTTGGGGACACCACAAAAGTCCG +
Preference number: 3 (lower is better)
Translates to: RWEGDCKRTGST*DHGTWGHHKSP
Trigger: CGGACTTTTGTGGTGTCCCCAAGTACCGTGGTCGCAGGTGCTGCCTGTCCGCTTGCAGTCGCCCTCCCAGCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR GCA 72 bp CGAACAAGGAAGAGGGTCAGGCGCTGGGAGGGCGACTaGAAGCGGACAGGCAGCACCTGCGACCACGGTACT +
Preference number: 3 (lower is better)
Translates to: RTRKRVRRWEGD*KRTGSTCDHGT
Trigger: AGTACCGTGGTCGCAGGTGCTGCCTGTCCGCTTGCAGTCGCCCTCCCAGCGCCTGACCCTCTTCCTTGTTCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR CCA 72 bp TGCAAGCGGACAGGCAGCACCTGCGACCACGGTACTTaGGGACACCACAAAAGTCCGCAGAGCAGGCACCGC +
Preference number: 3 (lower is better)
Translates to: CKRTGSTCDHGT*GHHKSPQSRHR
Trigger: GCGGTGCCTGCTCTGCGGACTTTTGTGGTGTCCCCAAGTACCGTGGTCGCAGGTGCTGCCTGTCCGCTTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR-3UTR CAA 90 bp GTGTTTCGGCCTAGCCGCGCTCTACGCACCGGTGTTGCTGCTGCGCGCGCGCAAACAACCGTGCATTCCTaGGCAGATGGGATGCGATGG +
Preference number: 3 (lower is better)
Translates to: VFRPSRALRTGVAAARAQTTVHS*ADGMRW
Trigger: CCATCGCATCCCATCTGCCAAGGAATGCACGGTTGT...TTGCGCGCGCGCAGCAGCAACACCGGTGCGTAGAGCGCGGCTAGGCCGAAACAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR CCA 72 bp CGCAGCTTTTCCTTTCTGCCACCGCCTTGTCCAAGATaGCGGACCTCCACCGCCAGCTGCAGGAGTACCTGG +
Preference number: 3 (lower is better)
Translates to: RSFSFLPPPCPR*RTSTASCRSTW
Trigger: CCAGGTACTCCTGCAGCTGGCGGTGGAGGTCCGCCATCTTGGACAAGGCGGTGGCAGAAAGGAAAAGCTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR-3UTR CAA 90 bp CTTGGGGACACCACAAAAGTCCGCAGAGCAGGCACCGCGGCACTTCCGCGAGCGCTCGATGTCAGCTTTTaGTGCTGGACTTGGCACACG +
Preference number: 3 (lower is better)
Translates to: LGDTTKVRRAGTAALPRALDVSF*CWTWHT
Trigger: CGTGTGCCAAGTCCAGCACAAAAAGCTGACATCGAG...CGCTCGCGGAAGTGCCGCGGTGCCTGCTCTGCGGACTTTTGTGGTGTCCCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR-3UTR CAA 90 bp GCGCAAGTTCGCGCTGCTCTGGTCACTGGGCTCGGCGCTGGCGTTGGCGGGAAGGACAGGAACTTAAATTaGTGGAGATGCCCCATGTCT +
Preference number: 3 (lower is better)
Translates to: AQVRAALVTGLGAGVGGKDRNLN*WRCPMS
Trigger: AGACATGGGGCATCTCCACAAATTTAAGTTCCTGTC...CTTCCCGCCAACGCCAGCGCCGAGCCCAGTGACCAGAGCAGCGCGAACTTGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR-3UTR CAA 90 bp GTGTTTCGGCCTAGCCGCGCTCTACGCACCGGTGTTGCTGCTGCGCGCGCGCAATTTTCTAAGCAACCATaGAAACTTCCAGCACCAGCG +
Preference number: 3 (lower is better)
Translates to: VFRPSRALRTGVAAARAQFSKQP*KLPAPA
Trigger: CGCTGGTGCTGGAAGTTTCAATGGTTGCTTAGAAAA...TTGCGCGCGCGCAGCAGCAACACCGGTGCGTAGAGCGCGGCTAGGCCGAAACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR GCA 72 bp CTGGATCCCAGTGTTGCCTTAACAGGGTGTCTGTCGTaGCGCAGTAGAGCACTGCTGCTTCCTCCAACCCCA +
Preference number: 3 (lower is better)
Translates to: LDPSVALTGCLS*RSRALLLPPTP
Trigger: TGGGGTTGGAGGAAGCAGCAGTGCTCTACTGCGGCACGACAGACACCCTGTTAAGGCAACACTGGGATCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR CCA 72 bp GAGGGTGGACAGGACAGGGCCAGCCAGGCTGGTAGCTaGCAGCAGTCTCTTCATCTTGAAGACCTCATTGAG +
Preference number: 3 (lower is better)
Translates to: EGGQDRASQAGS*QQSLHLEDLIE
Trigger: CTCAATGAGGTCTTCAAGATGAAGAGACTGCTGCCAGCTACCAGCCTGGCTGGCCCTGTCCTGTCCACCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR-3UTR CAA 90 bp CTTGGGGACACCACAAAAGTCCGCAGAGCAGGCACCGCGGCACTTCCGCGAGCGGTAAAGAACACTGCCTaGTTCCCCATCAGTAAACAA +
Preference number: 3 (lower is better)
Translates to: LGDTTKVRRAGTAALPRAVKNTA*FPISKQ
Trigger: TTGTTTACTGATGGGGAACAAGGCAGTGTTCTTTAC...CGCTCGCGGAAGTGCCGCGGTGCCTGCTCTGCGGACTTTTGTGGTGTCCCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR-3UTR CAA 90 bp CCTTTCGCCGTCGCCGACCAATTGCCGCCCGAAGACCGAACCGCTTCAGCGGAGAACTACCTTAATTTATaGCCAGAAGGTATGAGCCTA +
Preference number: 3 (lower is better)
Translates to: PFAVADQLPPEDRTASAENYLNL*PEGMSL
Trigger: TAGGCTCATACCTTCTGGCAATAAATTAAGGTAGTT...CTCCGCTGAAGCGGTTCGGTCTTCGGGCGGCAATTGGTCGGCGACGGCGAAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR GCA 72 bp TTTCACGACGAAAGCGACGGACCAAAAGAAATTTCCTaGCCCAAGAAGCATGGGATCCAGGAAGGGGCGCGT +
Preference number: 3 (lower is better)
Translates to: FHDESDGPKEIS*PKKHGIQEGAR
Trigger: ACGCGCCCCTTCCTGGATCCCATGCTTCTTGGGGCAGGAAATTTCTTTTGGTCCGTCGCTTTCGTCGTGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR TCA 72 bp CAACATCCACACTGTAGGCTTGCAGGCTACCCGCCCTaGGATTTGGTAAAGAACACTGCCTTGTTCCCCATC +
Preference number: 3 (lower is better)
Translates to: QHPHCRLAGYPP*DLVKNTALFPI
Trigger: GATGGGGAACAAGGCAGTGTTCTTTACCAAATCTCAGGGCGGGTAGCCTGCAAGCCTACAGTGTGGATGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR TCA 72 bp CCAGTGGTCCTCGCGCTTGACTGCACATCAGTTACTTaGAGAGCCACACCTCAGATCAATGCAGTCAGAACC +
Preference number: 3 (lower is better)
Translates to: PVVLALDCTSVT*RATPQINAVRT
Trigger: GGTTCTGACTGCATTGATCTGAGGTGTGGCTCTTCAAGTAACTGATGTGCAGTCAAGCGCGAGGACCACTGG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR-3UTR CAA 90 bp AAGAAACAAGAGAGATTCTGTGTACCCTTTACCCATTCCTCCATGTTGCAAAACGCCGTCGCCGACCAATaGCCGCCCGAAGACCGAACC +
Preference number: 3 (lower is better)
Translates to: KKQERFCVPFTHSSMLQNAVADQ*PPEDRT
Trigger: GGTTCGGTCTTCGGGCGGCAATTGGTCGGCGACGGC...GTTTTGCAACATGGAGGAATGGGTAAAGGGTACACAGAATCTCTCTTGTTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR GCA 72 bp CCCAAGAAGCATGGGATCCAGGAAGGGGCGCGTAGATaGTTAACGGTCTCTTCGGAAATCCTGCAAATAGAA +
Preference number: 3 (lower is better)
Translates to: PKKHGIQEGARR*LTVSSEILQIE
Trigger: TTCTATTTGCAGGATTTCCGAAGAGACCGTTAAGCATCTACGCGCCCCTTCCTGGATCCCATGCTTCTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR TCA 72 bp CAGCAGACAACCCAGGCCAAGAATAAAGAGAAGCCATaGCTGAAGCCCCTGGTAAGGAAGAAAACGCAGAAC +
Preference number: 3 (lower is better)
Translates to: QQTTQAKNKEKP*LKPLVRKKTQN
Trigger: GTTCTGCGTTTTCTTCCTTACCAGGGGCTTCAGTCATGGCTTCTCTTTATTCTTGGCCTGGGTTGTCTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393006.5
3UTR CCA 72 bp ATTTGTCTGGCAATGATGAACCTGAATTCAGCAGAATaGACACTTCCGGGGGAGGAAGAGGAGACTGGGGAA +
Preference number: 3 (lower is better)
Translates to: ICLAMMNLNSAE*TLPGEEEETGE
Trigger: TTCCCCAGTCTCCTCTTCCTCCCCCGGAAGTGTCCATTCTGCTGAATTCAGGTTCATCATTGCCAGACAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393006.5
3UTR GCA 72 bp CACATCAGTTACTTGAAGAGCCACACCTCAGATCAATaGAGTCAGAACCTGGGAAGTAGGTCCCAGACATCA +
Preference number: 3 (lower is better)
Translates to: HISYLKSHTSDQ*SQNLGSRSQTS
Trigger: TGATGTCTGGGACCTACTTCCCAGGTTCTGACTGCATTGATCTGAGGTGTGGCTCTTCAAGTAACTGATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR CCA 72 bp ATGAACATCAGCAACAACCGTGCATTCCTTGGCAGATaGGATGCGATGGAAACCAAAGGTTTCCTTAAGGCA +
Preference number: 3 (lower is better)
Translates to: MNISNNRAFLGR*DAMETKGFLKA
Trigger: TGCCTTAAGGAAACCTTTGGTTTCCATCGCATCCCATCTGCCAAGGAATGCACGGTTGTTGCTGATGTTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR CCA 72 bp TATGCTCATGAACATCAGCAACAACCGTGCATTCCTTaGCAGATGGGATGCGATGGAAACCAAAGGTTTCCT +
Preference number: 3 (lower is better)
Translates to: YAHEHQQQPCIP*QMGCDGNQRFP
Trigger: AGGAAACCTTTGGTTTCCATCGCATCCCATCTGCCAAGGAATGCACGGTTGTTGCTGATGTTCATGAGCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR TCA 72 bp CTCCTCATCATAACAAGGCGATTCAAACCTAAACTGTaGTTCTTAGGAGATGCTTCCAAGGGGAAGCTCCCT +
Preference number: 3 (lower is better)
Translates to: LLIITRRFKPKL*FLGDASKGKLP
Trigger: AGGGAGCTTCCCCTTGGAAGCATCTCCTAAGAATCACAGTTTAGGTTTGAATCGCCTTGTTATGATGAGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR TCA 72 bp GGAATTTGCCATGGACAAGATCTATCTGGCTTACTGTaGGTTAGAAGTACGCCCTGCCGTAACACTGGTATT +
Preference number: 3 (lower is better)
Translates to: GICHGQDLSGLL*VRSTPCRNTGI
Trigger: AATACCAGTGTTACGGCAGGGCGTACTTCTAACTCACAGTAAGCCAGATAGATCTTGTCCATGGCAAATTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR CCA 72 bp CAGATCAGTTTAAGACAAAGGGTATATGAGTACCCATaGCCCATAGCCAGATACTCCAGTTGGACAGAGGAT +
Preference number: 3 (lower is better)
Translates to: QISLRQRVYEYP*PIARYSSWTED
Trigger: ATCCTCTGTCCAACTGGAGTATCTGGCTATGGGCCATGGGTACTCATATACCCTTTGTCTTAAACTGATCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393006.5
3UTR CCA 72 bp GACGGCTATCTAAATCAAACCACAGTGTCAATATGTTaGGAACAAGTACCCTGGCTACAAGGAAGGAAAAGG +
Preference number: 3 (lower is better)
Translates to: DGYLNQTTVSIC*EQVPWLQGRKR
Trigger: CCTTTTCCTTCCTTGTAGCCAGGGTACTTGTTCCCAACATATTGACACTGTGGTTTGATTTAGATAGCCGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409658.7
3UTR-3UTR CAA 90 bp CAGAAAGCAGCAGCAAAGTCCGCTGTAAGAAAGAGTACTCTGAGGTGTGTGTGTTTTGCCAGAATCTTCTaGGGTATATTCACAGAAGTT +
Preference number: 3 (lower is better)
Translates to: QKAAAKSAVRKSTLRCVCFARIF*GIFTEV
Trigger: AACTTCTGTGAATATACCCAAGAAGATTCTGGCAAA...ACACACACACCTCAGAGTACTCTTTCTTACAGCGGACTTTGCTGCTGCTTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393006.5
3UTR TCA 72 bp AGGAGAGGGAAGAATCCAGTGAAGAAGCCCTTAAAGTaGATGTCGTCAGCTAACATAGGCATCTCATCAAAA +
Preference number: 3 (lower is better)
Translates to: RRGKNPVKKPLK*MSSANIGISSK
Trigger: TTTTGATGAGATGCCTATGTTAGCTGACGACATTCACTTTAAGGGCTTCTTCACTGGATTCTTCCCTCTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409658.7
3UTR-3UTR CAA 90 bp CTGTATCTGGTGGAAACCATGGATTTCTACAAGCTCGAATTATTCCTCATTGTACTGCACATCAGTTACTaGAAGAGCCACACCTCAGAT +
Preference number: 3 (lower is better)
Translates to: LYLVETMDFYKLELFLIVLHISY*KSHTSD
Trigger: ATCTGAGGTGTGGCTCTTCAAGTAACTGATGTGCAG...TACAATGAGGAATAATTCGAGCTTGTAGAAATCCATGGTTTCCACCAGATACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR-3UTR CAA 90 bp AAGATTGATGGGAGTCTGGCACTAAATACCAAGACTATTAGAAAGGCCAGTACCCAAGTTCACTTTCAGTaGGCCAGATTAAGGATACAC +
Preference number: 3 (lower is better)
Translates to: KIDGSLALNTKTIRKASTQVHFQ*ARLRIH
Trigger: GTGTATCCTTAATCTGGCCAACTGAAAGTGAACTTG...GGTACTGGCCTTTCTAATAGTCTTGGTATTTAGTGCCAGACTCCCATCAATCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393006.5
3UTR TCA 72 bp TGGCACAACCTTAAAGAATGCTGCTTAGCTTTATTCTaGGGCTGCAGCAATTCTTCAGGCTTGTATTTGGAA +
Preference number: 3 (lower is better)
Translates to: WHNLKECCLALF*GCSNSSGLYLE
Trigger: TTCCAAATACAAGCCTGAAGAATTGCTGCAGCCTCAGAATAAAGCTAAGCAGCATTCTTTAAGGTTGTGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409658.7
3UTR-3UTR CAA 90 bp CTGTATCTGGTGGAAACCATGGATTTCTACAAGCTCGAATTATTCCTCATTGTAAGCAGTCTCTTCATCTaGAAGACCTCATTGAGGGTT +
Preference number: 3 (lower is better)
Translates to: LYLVETMDFYKLELFLIVSSLFI*KTSLRV
Trigger: AACCCTCAATGAGGTCTTCAAGATGAAGAGACTGCT...TACAATGAGGAATAATTCGAGCTTGTAGAAATCCATGGTTTCCACCAGATACAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR-3UTR CAA 90 bp GGCTATCTAAATCAAACCACAGTGTCAATATGTTGGGAACAAGTACCCTGGCTATTACAGCTGCAAAGCTaGAAGAACCCATTCATTACT +
Preference number: 3 (lower is better)
Translates to: GYLNQTTVSICWEQVPWLLQLQS*KNPFIT
Trigger: AGTAATGAATGGGTTCTTCAAGCTTTGCAGCTGTAA...TAGCCAGGGTACTTGTTCCCAACATATTGACACTGTGGTTTGATTTAGATAGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409658.7
3UTR-3UTR CAA 90 bp GGCTATCTAAATCAAACCACAGTGTCAATATGTTGGGAACAAGTACCCTGGCTAAGCAATTCTTCAGGCTaGTATTTGGAACTTTTTCCC +
Preference number: 3 (lower is better)
Translates to: GYLNQTTVSICWEQVPWLSNSSG*YLELFP
Trigger: GGGAAAAAGTTCCAAATACAAGCCTGAAGAATTGCT...TAGCCAGGGTACTTGTTCCCAACATATTGACACTGTGGTTTGATTTAGATAGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409658.7
3UTR GCA 72 bp AAGCTTGAAGAACCCATTCATTACTCCGTTAATGTTTaGCACATCCAGTTATCTGTGAGGGTTTTAGTCCTA +
Preference number: 3 (lower is better)
Translates to: KLEEPIHYSVNV*HIQLSVRVLVL
Trigger: TAGGACTAAAACCCTCACAGATAACTGGATGTGGCAAACATTAACGGAGTAATGAATGGGTTCTTCAAGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409658.7
3UTR GCA 72 bp CAGAAGAAAAGTCCTAGAGTCTTCTTGACAATGATCTaGTTACAGCTGCAAAGCTTGAAGAACCCATTCATT +
Preference number: 3 (lower is better)
Translates to: QKKSPRVFLTMI*LQLQSLKNPFI
Trigger: AATGAATGGGTTCTTCAAGCTTTGCAGCTGTAAGCAGATCATTGTCAAGAAGACTCTAGGACTTTTCTTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409658.7
3UTR TCA 72 bp TTTCACCACAACCCAACAGTCAACATCAACTTGGAGTaGTTACTATTAGTCATCTTTGTTGTCCAGTCTAGA +
Preference number: 3 (lower is better)
Translates to: FHHNPTVNINLE*LLLVIFVVQSR
Trigger: TCTAGACTGGACAACAAAGATGACTAATAGTAATCACTCCAAGTTGATGTTGACTGTTGGGTTGTGGTGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393006.5
3UTR TCA 72 bp CGGTTAATTCATATTGTAAAAGGACTGCCAGGAGAATaGCGGCTATCTAAATCAAACCACAGTGTCAATATG +
Preference number: 3 (lower is better)
Translates to: RLIHIVKGLPGE*RLSKSNHSVNM
Trigger: CATATTGACACTGTGGTTTGATTTAGATAGCCGTCATTCTCCTGGCAGTCCTTTTACAATATGAATTAACCG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409658.7
3UTR CCA 72 bp AGTTTCTCAACTAACTCTAAAAACTCCCTTGAACTTTaGAATCCTATGAAGGACCAGCTGTGTAAACTCAAT +
Preference number: 3 (lower is better)
Translates to: SFSTNSKNSLEL*NPMKDQLCKLN
Trigger: ATTGAGTTTACACAGCTGGTCCTTCATAGGATTCCAAAGTTCAAGGGAGTTTTTAGAGTTAGTTGAGAAACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409658.7
3UTR CCA 72 bp TCAATATGTACATTATTACAAATCTGTGGGAGAATTTaGTCACGAGTCTTCTTTTCTCAAGAGTACTTCCAA +
Preference number: 3 (lower is better)
Translates to: SICTLLQICGRI*SRVFFSQEYFQ
Trigger: TTGGAAGTACTCTTGAGAAAAGAAGACTCGTGACCAAATTCTCCCACAGATTTGTAATAATGTACATATTGA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393006.5
CDS-3UTR CCA 90 bp CGCCGCAGGCCCTGCCCCTTTCGCCGTCGCCGACCAATTGCCGCCCGAAGACCGGGCTTGCGCTGGACGTaGGCGCGGAGCCCTGCGGAG +
Preference number: 4 (lower is better)
Translates to: RRRPCPFRRRRPIAARRPGLRWT*ARSPAE
Trigger: CTCCGCAGGGCTCCGCGCCCACGTCCAGCGCAAGCC...CGGTCTTCGGGCGGCAATTGGTCGGCGACGGCGAAAGGGGCAGGGCCTGCGGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR TCA 90 bp CGCCGCAGGCCCTGCCCCTTTCGCCGTCGCCGACCAATTGCCGCCCGAAGACCGAAGGTGCTGCCCGTGTaGGGACCTCGCGCCCTCGCC +
Preference number: 4 (lower is better)
Translates to: RRRPCPFRRRRPIAARRPKVLPV*GPRALA
Trigger: GGCGAGGGCGCGAGGTCCTCACACGGGCAGCACCTT...CGGTCTTCGGGCGGCAATTGGTCGGCGACGGCGAAAGGGGCAGGGCCTGCGGCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR TCA 90 bp CGCCGCAGGCCCTGCCCCTTTCGCCGTCGCCGACCAATTGCCGCCCGAAGACCGTGGGGCGGCCCCTGCTaGCTTTGTGAGCCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: RRRPCPFRRRRPIAARRPWGGPC*LCEPGG
Trigger: GCCTCCAGGCTCACAAAGTCAGCAGGGGCCGCCCCA...CGGTCTTCGGGCGGCAATTGGTCGGCGACGGCGAAAGGGGCAGGGCCTGCGGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CCA 90 bp CGCCGCAGGCCCTGCCCCTTTCGCCGTCGCCGACCAATTGCCGCCCGAAGACCGTGGGGAGCAGGACCCTaGTTCTCCCGGGGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: RRRPCPFRRRRPIAARRPWGAGP*FSRGPG
Trigger: TCCAGGCCCCCGGGAGAACCAGGGTCCTGCTCCCCA...CGGTCTTCGGGCGGCAATTGGTCGGCGACGGCGAAAGGGGCAGGGCCTGCGGCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR CAA 72 bp GCCGCAGGCCCTGCCCCTTTCGCCGTCGCCGACCAATaGCCGCCCGAAGACCGAACCGCTTCAGCGGAGGGC +
Preference number: 4 (lower is better)
Translates to: AAGPAPFAVADQ*PPEDRTASAEG
Trigger: GCCCTCCGCTGAAGCGGTTCGGTCTTCGGGCGGCAATTGGTCGGCGACGGCGAAAGGGGCAGGGCCTGCGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR TCA 90 bp CCTTTCGCCGTCGCCGACCAATTGCCGCCCGAAGACCGAACCGCTTCAGCGGAGCCGCGCCGGCCGAGCTaGGGACTGCACGCCGCTGTG +
Preference number: 4 (lower is better)
Translates to: PFAVADQLPPEDRTASAEPRRPS*GLHAAV
Trigger: CACAGCGGCGTGCAGTCCTCAGCTCGGCCGGCGCGG...CTCCGCTGAAGCGGTTCGGTCTTCGGGCGGCAATTGGTCGGCGACGGCGAAAGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR GCA 90 bp CGCCGCAGGCCCTGCCCCTTTCGCCGTCGCCGACCAATTGCCGCCCGAAGACCGGTGCCTGGGCCATCATaGCAGGGGCGCTTTCGGGGA +
Preference number: 4 (lower is better)
Translates to: RRRPCPFRRRRPIAARRPVPGPS*QGRFRG
Trigger: TCCCCGAAAGCGCCCCTGGCATGATGGCCCAGGCAC...CGGTCTTCGGGCGGCAATTGGTCGGCGACGGCGAAAGGGGCAGGGCCTGCGGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR GCA 90 bp GCGCAAGTTCGCGCTGCTCTGGTCACTGGGCTCGGCGCTGGCGTTGGCGGGAAGGCCTTCGCAGCACGCTaGTCACGGTGCTGGGCGCGG +
Preference number: 4 (lower is better)
Translates to: AQVRAALVTGLGAGVGGKAFAAR*SRCWAR
Trigger: CCGCGCCCAGCACCGTGAGCAGCGTGCTGCGAAGGC...CTTCCCGCCAACGCCAGCGCCGAGCCCAGTGACCAGAGCAGCGCGAACTTGCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CCA 90 bp GCGCAAGTTCGCGCTGCTCTGGTCACTGGGCTCGGCGCTGGCGTTGGCGGGAAGGGACCCCTGCAGTCCTaGCCACCCCGGAAAGGCCCC +
Preference number: 4 (lower is better)
Translates to: AQVRAALVTGLGAGVGGKGPLQS*PPRKGP
Trigger: GGGGCCTTTCCGGGGTGGCCAGGACTGCAGGGGTCC...CTTCCCGCCAACGCCAGCGCCGAGCCCAGTGACCAGAGCAGCGCGAACTTGCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR GCA 90 bp CCTTTCGCCGTCGCCGACCAATTGCCGCCCGAAGACCGAACCGCTTCAGCGGAGCCCCTCTCGGGCCCATaGTCAGGCCCGCCGCTCTGC +
Preference number: 4 (lower is better)
Translates to: PFAVADQLPPEDRTASAEPLSGP*SGPPLC
Trigger: GCAGAGCGGCGGGCCTGAGCATGGGCCCGAGAGGGG...CTCCGCTGAAGCGGTTCGGTCTTCGGGCGGCAATTGGTCGGCGACGGCGAAAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR GCA 90 bp GTGTTTCGGCCTAGCCGCGCTCTACGCACCGGTGTTGCTGCTGCGCGCGCGCAACCCCTCGAGAAGGGGTaGCACTGCCTGGAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: VFRPSRALRTGVAAARAQPLEKG*HCLEGP
Trigger: GGGGCCCTCCAGGCAGTGGCACCCCTTCTCGAGGGG...TTGCGCGCGCGCAGCAGCAACACCGGTGCGTAGAGCGCGGCTAGGCCGAAACAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR GCA 90 bp GCGCAAGTTCGCGCTGCTCTGGTCACTGGGCTCGGCGCTGGCGTTGGCGGGAAGCACCGGTGTTGCTGCTaGGCGCGCGCAAGTTCGCGC +
Preference number: 4 (lower is better)
Translates to: AQVRAALVTGLGAGVGGKHRCCC*ARASSR
Trigger: GCGCGAACTTGCGCGCGCGCAGCAGCAACACCGGTG...CTTCCCGCCAACGCCAGCGCCGAGCCCAGTGACCAGAGCAGCGCGAACTTGCGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CCA 90 bp CTTGGGGACACCACAAAAGTCCGCAGAGCAGGCACCGCGGCACTTCCGCGAGCGCATGTCCTGAGGCCGTaGCAACCCCTGGGGCGGGCC +
Preference number: 4 (lower is better)
Translates to: LGDTTKVRRAGTAALPRAHVLRP*QPLGRA
Trigger: GGCCCGCCCCAGGGGTTGCCACGGCCTCAGGACATG...CGCTCGCGGAAGTGCCGCGGTGCCTGCTCTGCGGACTTTTGTGGTGTCCCCAAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CCA 90 bp GCGCAAGTTCGCGCTGCTCTGGTCACTGGGCTCGGCGCTGGCGTTGGCGGGAAGGTGCTCTGTCCTTCCTaGTTGAAGGGGGCCCGGGGC +
Preference number: 4 (lower is better)
Translates to: AQVRAALVTGLGAGVGGKVLCPS*LKGARG
Trigger: GCCCCGGGCCCCCTTCAACCAGGAAGGACAGAGCAC...CTTCCCGCCAACGCCAGCGCCGAGCCCAGTGACCAGAGCAGCGCGAACTTGCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CCA 90 bp GCGCAAGTTCGCGCTGCTCTGGTCACTGGGCTCGGCGCTGGCGTTGGCGGGAAGGCCTGGTATCAGGGGTaGGGGGCCTGTGCTCTGTCC +
Preference number: 4 (lower is better)
Translates to: AQVRAALVTGLGAGVGGKAWYQG*GACALS
Trigger: GGACAGAGCACAGGCCCCCCACCCCTGATACCAGGC...CTTCCCGCCAACGCCAGCGCCGAGCCCAGTGACCAGAGCAGCGCGAACTTGCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CCA 90 bp GCGCAAGTTCGCGCTGCTCTGGTCACTGGGCTCGGCGCTGGCGTTGGCGGGAAGCTGTGCGGAAGCCCGTaGCGAAGGCCCTGCCCTAAC +
Preference number: 4 (lower is better)
Translates to: AQVRAALVTGLGAGVGGKLCGSP*RRPCPN
Trigger: GTTAGGGCAGGGCCTTCGCCACGGGCTTCCGCACAG...CTTCCCGCCAACGCCAGCGCCGAGCCCAGTGACCAGAGCAGCGCGAACTTGCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CCA 90 bp CCTTTCGCCGTCGCCGACCAATTGCCGCCCGAAGACCGAACCGCTTCAGCGGAGTCGCGCCCTCGCCGCTaGGGAAGTACGCGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: PFAVADQLPPEDRTASAESRPRR*GSTRSQ
Trigger: CTGGCTCCGCGTACTTCCCCAGCGGCGAGGGCGCGA...CTCCGCTGAAGCGGTTCGGTCTTCGGGCGGCAATTGGTCGGCGACGGCGAAAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR TCA 90 bp GTGTTTCGGCCTAGCCGCGCTCTACGCACCGGTGTTGCTGCTGCGCGCGCGCAATCGGGGAAGTCTGGGTaGGGGCCACGCCTATCAGGG +
Preference number: 4 (lower is better)
Translates to: VFRPSRALRTGVAAARAQSGKSG*GPRLSG
Trigger: CCCTGATAGGCGTGGCCCTCACCCAGACTTCCCCGA...TTGCGCGCGCGCAGCAGCAACACCGGTGCGTAGAGCGCGGCTAGGCCGAAACAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR TCA 90 bp GCGCAAGTTCGCGCTGCTCTGGTCACTGGGCTCGGCGCTGGCGTTGGCGGGAAGGGCCATCCCCCTCGCTaGATTCCCTGTGATCAGGGG +
Preference number: 4 (lower is better)
Translates to: AQVRAALVTGLGAGVGGKGHPPR*IPCDQG
Trigger: CCCCTGATCACAGGGAATTCAGCGAGGGGGATGGCC...CTTCCCGCCAACGCCAGCGCCGAGCCCAGTGACCAGAGCAGCGCGAACTTGCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR GCA 90 bp GCGCAAGTTCGCGCTGCTCTGGTCACTGGGCTCGGCGCTGGCGTTGGCGGGAAGGTGGAGGCCCCTGCATaGCTCGGATCTCCTGAGGAC +
Preference number: 4 (lower is better)
Translates to: AQVRAALVTGLGAGVGGKVEAPA*LGSPED
Trigger: GTCCTCAGGAGATCCGAGGCATGCAGGGGCCTCCAC...CTTCCCGCCAACGCCAGCGCCGAGCCCAGTGACCAGAGCAGCGCGAACTTGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR GCA 90 bp GTGTTTCGGCCTAGCCGCGCTCTACGCACCGGTGTTGCTGCTGCGCGCGCGCAACCGCCGCTCTGCTCATaGCGCCTCTCTGACATCGGG +
Preference number: 4 (lower is better)
Translates to: VFRPSRALRTGVAAARAQPPLCS*RLSDIG
Trigger: CCCGATGTCAGAGAGGCGGCATGAGCAGAGCGGCGG...TTGCGCGCGCGCAGCAGCAACACCGGTGCGTAGAGCGCGGCTAGGCCGAAACAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR GCA 90 bp CGCCGCAGGCCCTGCCCCTTTCGCCGTCGCCGACCAATTGCCGCCCGAAGACCGACAGGGTGTCTGTCGTaGCGCAGTAGAGCACTGCTG +
Preference number: 4 (lower is better)
Translates to: RRRPCPFRRRRPIAARRPTGCLS*RSRALL
Trigger: CAGCAGTGCTCTACTGCGGCACGACAGACACCCTGT...CGGTCTTCGGGCGGCAATTGGTCGGCGACGGCGAAAGGGGCAGGGCCTGCGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CCA 90 bp CCTTTCGCCGTCGCCGACCAATTGCCGCCCGAAGACCGAACCGCTTCAGCGGAGGCGCCCTCGAAAACGTaGGTCCTCGGGATCCCGGGG +
Preference number: 4 (lower is better)
Translates to: PFAVADQLPPEDRTASAEAPSKT*VLGIPG
Trigger: CCCCGGGATCCCGAGGACCCACGTTTTCGAGGGCGC...CTCCGCTGAAGCGGTTCGGTCTTCGGGCGGCAATTGGTCGGCGACGGCGAAAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR CAA 72 bp CTGTGTTTCGGCCTAGCCGCGCTCTACGCACCGGTGTaGCTGCTGCGCGCGCGCAAGTTCGCGCTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: LCFGLAALYAPV*LLRARKFALLW
Trigger: CCAGAGCAGCGCGAACTTGCGCGCGCGCAGCAGCAACACCGGTGCGTAGAGCGCGGCTAGGCCGAAACACAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR GCA 90 bp GCGCAAGTTCGCGCTGCTCTGGTCACTGGGCTCGGCGCTGGCGTTGGCGGGAAGCGACCTTGTGCTCCCTaGTGCCCTAGGCCTGGTATC +
Preference number: 4 (lower is better)
Translates to: AQVRAALVTGLGAGVGGKRPCAP*CPRPGI
Trigger: GATACCAGGCCTAGGGCAGCAGGGAGCACAAGGTCG...CTTCCCGCCAACGCCAGCGCCGAGCCCAGTGACCAGAGCAGCGCGAACTTGCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR GCA 90 bp CGCCGCAGGCCCTGCCCCTTTCGCCGTCGCCGACCAATTGCCGCCCGAAGACCGGGGATGCCATGTCCATaGCTTGGAGAGAAGAGGAGC +
Preference number: 4 (lower is better)
Translates to: RRRPCPFRRRRPIAARRPGMPCP*LGEKRS
Trigger: GCTCCTCTTCTCTCCAAGGCATGGACATGGCATCCC...CGGTCTTCGGGCGGCAATTGGTCGGCGACGGCGAAAGGGGCAGGGCCTGCGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR GCA 90 bp CTTGGGGACACCACAAAAGTCCGCAGAGCAGGCACCGCGGCACTTCCGCGAGCGCCGTGGCGAAGGCCCTaGCCTAACAGCCTGCGAGTC +
Preference number: 4 (lower is better)
Translates to: LGDTTKVRRAGTAALPRAPWRRP*PNSLRV
Trigger: GACTCGCAGGCTGTTAGGGCAGGGCCTTCGCCACGG...CGCTCGCGGAAGTGCCGCGGTGCCTGCTCTGCGGACTTTTGTGGTGTCCCCAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CCA 90 bp CTTGGGGACACCACAAAAGTCCGCAGAGCAGGCACCGCGGCACTTCCGCGAGCGTCTACATGGCAGCGCTaGGCGCCACGCTGTTCGCCG +
Preference number: 4 (lower is better)
Translates to: LGDTTKVRRAGTAALPRASTWQR*APRCSP
Trigger: CGGCGAACAGCGTGGCGCCCAGCGCTGCCATGTAGA...CGCTCGCGGAAGTGCCGCGGTGCCTGCTCTGCGGACTTTTGTGGTGTCCCCAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CCA 90 bp CCTTTCGCCGTCGCCGACCAATTGCCGCCCGAAGACCGAACCGCTTCAGCGGAGGCGGGTGCCTGCTGCTaGCTGCACTGTGTTTCGGCC +
Preference number: 4 (lower is better)
Translates to: PFAVADQLPPEDRTASAEAGACC*LHCVSA
Trigger: GGCCGAAACACAGTGCAGCCAGCAGCAGGCACCCGC...CTCCGCTGAAGCGGTTCGGTCTTCGGGCGGCAATTGGTCGGCGACGGCGAAAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR TCA 90 bp CTTGGGGACACCACAAAAGTCCGCAGAGCAGGCACCGCGGCACTTCCGCGAGCGGGTCCCTGCATACCTTaGGTACCCGGAGGCCCCTGT +
Preference number: 4 (lower is better)
Translates to: LGDTTKVRRAGTAALPRAGPCIP*VPGGPC
Trigger: ACAGGGGCCTCCGGGTACTCAAGGTATGCAGGGACC...CGCTCGCGGAAGTGCCGCGGTGCCTGCTCTGCGGACTTTTGTGGTGTCCCCAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR TCA 90 bp CCTTTCGCCGTCGCCGACCAATTGCCGCCCGAAGACCGAACCGCTTCAGCGGAGGGACCTTGGATCCCTTaGGACCCTGGTCCGCCTTGG +
Preference number: 4 (lower is better)
Translates to: PFAVADQLPPEDRTASAEGPWIP*DPGPPW
Trigger: CCAAGGCGGACCAGGGTCTCAAGGGATCCAAGGTCC...CTCCGCTGAAGCGGTTCGGTCTTCGGGCGGCAATTGGTCGGCGACGGCGAAAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR TCA 90 bp CTTGGGGACACCACAAAAGTCCGCAGAGCAGGCACCGCGGCACTTCCGCGAGCGGATTTGGGCACTCTCTaGGCAGGTCCTGGGCCCCCT +
Preference number: 4 (lower is better)
Translates to: LGDTTKVRRAGTAALPRADLGTL*AGPGPP
Trigger: AGGGGGCCCAGGACCTGCTCAGAGAGTGCCCAAATC...CGCTCGCGGAAGTGCCGCGGTGCCTGCTCTGCGGACTTTTGTGGTGTCCCCAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR GCA 90 bp GTGTTTCGGCCTAGCCGCGCTCTACGCACCGGTGTTGCTGCTGCGCGCGCGCAACCTTGTGCTCCCTGCTaGCCTAGGCCTGGTATCAGG +
Preference number: 4 (lower is better)
Translates to: VFRPSRALRTGVAAARAQPCAPC*PRPGIR
Trigger: CCTGATACCAGGCCTAGGGCAGCAGGGAGCACAAGG...TTGCGCGCGCGCAGCAGCAACACCGGTGCGTAGAGCGCGGCTAGGCCGAAACAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR GCA 90 bp CCTTTCGCCGTCGCCGACCAATTGCCGCCCGAAGACCGAACCGCTTCAGCGGAGCGGACAGGCAGCACCTaGGACCACGGTACTTGGGGA +
Preference number: 4 (lower is better)
Translates to: PFAVADQLPPEDRTASAERTGST*DHGTWG
Trigger: TCCCCAAGTACCGTGGTCGCAGGTGCTGCCTGTCCG...CTCCGCTGAAGCGGTTCGGTCTTCGGGCGGCAATTGGTCGGCGACGGCGAAAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CCA 90 bp CCTTTCGCCGTCGCCGACCAATTGCCGCCCGAAGACCGAACCGCTTCAGCGGAGCTTCCTTCCTCCTCGTaGGGTACCCCGACCTCGACC +
Preference number: 4 (lower is better)
Translates to: PFAVADQLPPEDRTASAELPSSS*GTPTST
Trigger: GGTCGAGGTCGGGGTACCCCACGAGGAGGAAGGAAG...CTCCGCTGAAGCGGTTCGGTCTTCGGGCGGCAATTGGTCGGCGACGGCGAAAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CCA 90 bp CCTTTCGCCGTCGCCGACCAATTGCCGCCCGAAGACCGAACCGCTTCAGCGGAGGTGCTCAGAAGTGCCTaGGCCATCATGCCAGGGGCG +
Preference number: 4 (lower is better)
Translates to: PFAVADQLPPEDRTASAEVLRSA*AIMPGA
Trigger: CGCCCCTGGCATGATGGCCCAGGCACTTCTGAGCAC...CTCCGCTGAAGCGGTTCGGTCTTCGGGCGGCAATTGGTCGGCGACGGCGAAAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR TCA 90 bp CTTGGGGACACCACAAAAGTCCGCAGAGCAGGCACCGCGGCACTTCCGCGAGCGCTCATGCCGCCTCTCTaGCATCGGGCCCATGTGATG +
Preference number: 4 (lower is better)
Translates to: LGDTTKVRRAGTAALPRALMPPL*HRAHVM
Trigger: CATCACATGGGCCCGATGTCAGAGAGGCGGCATGAG...CGCTCGCGGAAGTGCCGCGGTGCCTGCTCTGCGGACTTTTGTGGTGTCCCCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR GCA 90 bp GTGTTTCGGCCTAGCCGCGCTCTACGCACCGGTGTTGCTGCTGCGCGCGCGCAACTCTGTGCTCAGAAGTaGCTGGGCCATCATGCCAGG +
Preference number: 4 (lower is better)
Translates to: VFRPSRALRTGVAAARAQLCAQK*LGHHAR
Trigger: CCTGGCATGATGGCCCAGGCACTTCTGAGCACAGAG...TTGCGCGCGCGCAGCAGCAACACCGGTGCGTAGAGCGCGGCTAGGCCGAAACAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR GCA 90 bp GTGTTTCGGCCTAGCCGCGCTCTACGCACCGGTGTTGCTGCTGCGCGCGCGCAAGCCTCCATCTCTCTGTaGTCAGAAGTGCCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: VFRPSRALRTGVAAARAQASISL*SEVPGP
Trigger: TGGCCCAGGCACTTCTGAGCACAGAGAGATGGAGGC...TTGCGCGCGCGCAGCAGCAACACCGGTGCGTAGAGCGCGGCTAGGCCGAAACAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CCA 90 bp CTTGGGGACACCACAAAAGTCCGCAGAGCAGGCACCGCGGCACTTCCGCGAGCGGGGAGTCACCTTTGTTaGGGCCAGGTCCTTGTCCGG +
Preference number: 4 (lower is better)
Translates to: LGDTTKVRRAGTAALPRAGSHLC*GQVLVR
Trigger: CCGGACAAGGACCTGGCCCCAACAAAGGTGACTCCC...CGCTCGCGGAAGTGCCGCGGTGCCTGCTCTGCGGACTTTTGTGGTGTCCCCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CCA 90 bp CGCCGCAGGCCCTGCCCCTTTCGCCGTCGCCGACCAATTGCCGCCCGAAGACCGAAACAACATGGGAGTTaGGGCAATGAGGGTGGACAG +
Preference number: 4 (lower is better)
Translates to: RRRPCPFRRRRPIAARRPKQHGS*GNEGGQ
Trigger: CTGTCCACCCTCATTGCCCCAACTCCCATGTTGTTT...CGGTCTTCGGGCGGCAATTGGTCGGCGACGGCGAAAGGGGCAGGGCCTGCGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CCA 90 bp CTTGGGGACACCACAAAAGTCCGCAGAGCAGGCACCGCGGCACTTCCGCGAGCGAGGCGACAGCAGCGTTaGGAGCTCCTCGATGTCAGC +
Preference number: 4 (lower is better)
Translates to: LGDTTKVRRAGTAALPRARRQQR*ELLDVS
Trigger: GCTGACATCGAGGAGCTCCCAACGCTGCTGTCGCCT...CGCTCGCGGAAGTGCCGCGGTGCCTGCTCTGCGGACTTTTGTGGTGTCCCCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR CAA 72 bp CTGCAAGCGGACAGGCAGCACCTGCGACCACGGTACTaGGGGACACCACAAAAGTCCGCAGAGCAGGCACCG +
Preference number: 4 (lower is better)
Translates to: LQADRQHLRPRY*GTPQKSAEQAP
Trigger: CGGTGCCTGCTCTGCGGACTTTTGTGGTGTCCCCAAGTACCGTGGTCGCAGGTGCTGCCTGTCCGCTTGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR TCA 90 bp CTTGGGGACACCACAAAAGTCCGCAGAGCAGGCACCGCGGCACTTCCGCGAGCGGAGAGGGGTGCCAGATaGGGGAGGAGGCTGAATTTG +
Preference number: 4 (lower is better)
Translates to: LGDTTKVRRAGTAALPRAERGAR*GRRLNL
Trigger: CAAATTCAGCCTCCTCCCTCATCTGGCACCCCTCTC...CGCTCGCGGAAGTGCCGCGGTGCCTGCTCTGCGGACTTTTGTGGTGTCCCCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR TCA 90 bp GCGCAAGTTCGCGCTGCTCTGGTCACTGGGCTCGGCGCTGGCGTTGGCGGGAAGTCACGAAAATGTTCATaGCCTGGCCCAGGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: AQVRAALVTGLGAGVGGKSRKCS*PGPGSL
Trigger: CAGAGAGCCTGGGCCAGGTCATGAACATTTTCGTGA...CTTCCCGCCAACGCCAGCGCCGAGCCCAGTGACCAGAGCAGCGCGAACTTGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR TCA 90 bp CCTTTCGCCGTCGCCGACCAATTGCCGCCCGAAGACCGAACCGCTTCAGCGGAGCCCCGTCCCAAGAAGTaGCACAAGTGGCCAACATCC +
Preference number: 4 (lower is better)
Translates to: PFAVADQLPPEDRTASAEPRPKK*HKWPTS
Trigger: GGATGTTGGCCACTTGTGTCACTTCTTGGGACGGGG...CTCCGCTGAAGCGGTTCGGTCTTCGGGCGGCAATTGGTCGGCGACGGCGAAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CCA 90 bp GCGCAAGTTCGCGCTGCTCTGGTCACTGGGCTCGGCGCTGGCGTTGGCGGGAAGCGAGGTGCCTGGTGCTaGAACCTTGGCATATGGAAA +
Preference number: 4 (lower is better)
Translates to: AQVRAALVTGLGAGVGGKRGAWC*NLGIWK
Trigger: TTTCCATATGCCAAGGTTCCAGCACCAGGCACCTCG...CTTCCCGCCAACGCCAGCGCCGAGCCCAGTGACCAGAGCAGCGCGAACTTGCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CCA 90 bp CTTGGGGACACCACAAAAGTCCGCAGAGCAGGCACCGCGGCACTTCCGCGAGCGGGCCCTCGCAATTCCTaGGGAGGTCCCAGCATTGAT +
Preference number: 4 (lower is better)
Translates to: LGDTTKVRRAGTAALPRAGPRNS*GGPSID
Trigger: ATCAATGCTGGGACCTCCCCAGGAATTGCGAGGGCC...CGCTCGCGGAAGTGCCGCGGTGCCTGCTCTGCGGACTTTTGTGGTGTCCCCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CCA 90 bp GTGTTTCGGCCTAGCCGCGCTCTACGCACCGGTGTTGCTGCTGCGCGCGCGCAACCCTTGAGATGGATGTaGCCCTCTTGCTGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: VFRPSRALRTGVAAARAQPLRWM*PSCWVL
Trigger: CAGAACCCAGCAAGAGGGCCACATCCATCTCAAGGG...TTGCGCGCGCGCAGCAGCAACACCGGTGCGTAGAGCGCGGCTAGGCCGAAACAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CCA 90 bp GCGCAAGTTCGCGCTGCTCTGGTCACTGGGCTCGGCGCTGGCGTTGGCGGGAAGCAACCGTGCATTCCTTaGCAGATGGGATGCGATGGA +
Preference number: 4 (lower is better)
Translates to: AQVRAALVTGLGAGVGGKQPCIP*QMGCDG
Trigger: TCCATCGCATCCCATCTGCCAAGGAATGCACGGTTG...CTTCCCGCCAACGCCAGCGCCGAGCCCAGTGACCAGAGCAGCGCGAACTTGCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR TCA 90 bp GTGTTTCGGCCTAGCCGCGCTCTACGCACCGGTGTTGCTGCTGCGCGCGCGCAAAGTCATCTGGTCTGCTaGAGTCATCGGGGAAGTCTG +
Preference number: 4 (lower is better)
Translates to: VFRPSRALRTGVAAARAQSHLVC*SHRGSL
Trigger: CAGACTTCCCCGATGACTTCAGCAGACCAGATGACT...TTGCGCGCGCGCAGCAGCAACACCGGTGCGTAGAGCGCGGCTAGGCCGAAACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CCA 90 bp CCTTTCGCCGTCGCCGACCAATTGCCGCCCGAAGACCGAACCGCTTCAGCGGAGTCCTCTGGGACCAGGTaGTCCCTGCATACCTTGAGT +
Preference number: 4 (lower is better)
Translates to: PFAVADQLPPEDRTASAESSGTR*SLHTLS
Trigger: ACTCAAGGTATGCAGGGACCACCTGGTCCCAGAGGA...CTCCGCTGAAGCGGTTCGGTCTTCGGGCGGCAATTGGTCGGCGACGGCGAAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CCA 90 bp CTTGGGGACACCACAAAAGTCCGCAGAGCAGGCACCGCGGCACTTCCGCGAGCGTGGAACGCCCAGATTTaGGCACTCTCTGAGCAGGTC +
Preference number: 4 (lower is better)
Translates to: LGDTTKVRRAGTAALPRAWNAQI*ALSEQV
Trigger: GACCTGCTCAGAGAGTGCCCAAATCTGGGCGTTCCA...CGCTCGCGGAAGTGCCGCGGTGCCTGCTCTGCGGACTTTTGTGGTGTCCCCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR TCA 90 bp CTTGGGGACACCACAAAAGTCCGCAGAGCAGGCACCGCGGCACTTCCGCGAGCGCCACATGTCATTATGTaGCCACGTCATGGCCCTCAC +
Preference number: 4 (lower is better)
Translates to: LGDTTKVRRAGTAALPRAPHVIM*PRHGPH
Trigger: GTGAGGGCCATGACGTGGTCACATAATGACATGTGG...CGCTCGCGGAAGTGCCGCGGTGCCTGCTCTGCGGACTTTTGTGGTGTCCCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR TCA 90 bp CTTGGGGACACCACAAAAGTCCGCAGAGCAGGCACCGCGGCACTTCCGCGAGCGCAAGCCTGCTGGAACTaGGCAGGAATGGGTTTTGCA +
Preference number: 4 (lower is better)
Translates to: LGDTTKVRRAGTAALPRAQACWN*AGMGFA
Trigger: TGCAAAACCCATTCCTGCTCAGTTCCAGCAGGCTTG...CGCTCGCGGAAGTGCCGCGGTGCCTGCTCTGCGGACTTTTGTGGTGTCCCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR GCA 90 bp CGCCGCAGGCCCTGCCCCTTTCGCCGTCGCCGACCAATTGCCGCCCGAAGACCGATCATTGTAATAACCTaGATCAGGCTGAATTGCCCG +
Preference number: 4 (lower is better)
Translates to: RRRPCPFRRRRPIAARRPIIVIT*IRLNCP
Trigger: CGGGCAATTCAGCCTGATGCAGGTTATTACAATGAT...CGGTCTTCGGGCGGCAATTGGTCGGCGACGGCGAAAGGGGCAGGGCCTGCGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR GCA 90 bp GCGCAAGTTCGCGCTGCTCTGGTCACTGGGCTCGGCGCTGGCGTTGGCGGGAAGATATCCTCCGTGGTCTaGTGTCAACATCCACATGTC +
Preference number: 4 (lower is better)
Translates to: AQVRAALVTGLGAGVGGKISSVV*CQHPHV
Trigger: GACATGTGGATGTTGACAGCAGACCACGGAGGATAT...CTTCCCGCCAACGCCAGCGCCGAGCCCAGTGACCAGAGCAGCGCGAACTTGCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR GCA 90 bp GCGCAAGTTCGCGCTGCTCTGGTCACTGGGCTCGGCGCTGGCGTTGGCGGGAAGATGGGCATGAAGTGTTaGAAGACTCTGCCCAGTCTT +
Preference number: 4 (lower is better)
Translates to: AQVRAALVTGLGAGVGGKMGMKC*KTLPSL
Trigger: AAGACTGGGCAGAGTCTTGCAACACTTCATGCCCAT...CTTCCCGCCAACGCCAGCGCCGAGCCCAGTGACCAGAGCAGCGCGAACTTGCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR GCA 90 bp TCTAAGCAACCATTGAAACTTCCAGCACCAGCGGCCAGGTACTGTGGCTCAGATGAGCGCCGCAGGCCCTaGCCCTTTCGCCGTCGCCGA +
Preference number: 4 (lower is better)
Translates to: SKQPLKLPAPAARYCGSDERRRP*PFRRRR
Trigger: TCGGCGACGGCGAAAGGGGCAGGGCCTGCGGCGCTC...ATCTGAGCCACAGTACCTGGCCGCTGGTGCTGGAAGTTTCAATGGTTGCTTAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR GCA 90 bp ACCACACCCACCCCTGCCTTCCAACTATTAATGCTGGCAGGACTTAGCCAGACCCGCTGGGAGGGCGACTaGAAGCGGACAGGCAGCACC +
Preference number: 4 (lower is better)
Translates to: TTPTPAFQLLMLAGLSQTRWEGD*KRTGST
Trigger: GGTGCTGCCTGTCCGCTTGCAGTCGCCCTCCCAGCG...GGTCTGGCTAAGTCCTGCCAGCATTAATAGTTGGAAGGCAGGGGTGGGTGTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CCA 90 bp CGCCGCAGGCCCTGCCCCTTTCGCCGTCGCCGACCAATTGCCGCCCGAAGACCGCAAATTTATTATCCGTaGGTGAGAAACTGGCCTCTC +
Preference number: 4 (lower is better)
Translates to: RRRPCPFRRRRPIAARRPQIYYP*VRNWPL
Trigger: GAGAGGCCAGTTTCTCACCCACGGATAATAAATTTG...CGGTCTTCGGGCGGCAATTGGTCGGCGACGGCGAAAGGGGCAGGGCCTGCGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CCA 90 bp CCTTTCGCCGTCGCCGACCAATTGCCGCCCGAAGACCGAACCGCTTCAGCGGAGAGGGTGGAAGTCATCTaGTCTGCTGAAGTCATCGGG +
Preference number: 4 (lower is better)
Translates to: PFAVADQLPPEDRTASAERVEVI*SAEVIG
Trigger: CCCGATGACTTCAGCAGACCAGATGACTTCCACCCT...CTCCGCTGAAGCGGTTCGGTCTTCGGGCGGCAATTGGTCGGCGACGGCGAAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR TCA 90 bp CGCCGCAGGCCCTGCCCCTTTCGCCGTCGCCGACCAATTGCCGCCCGAAGACCGGTAGCCAATTGCCATTaGGGTTTAATTTCACTTCCA +
Preference number: 4 (lower is better)
Translates to: RRRPCPFRRRRPIAARRPVANCH*GLISLP
Trigger: TGGAAGTGAAATTAAACCTCAATGGCAATTGGCTAC...CGGTCTTCGGGCGGCAATTGGTCGGCGACGGCGAAAGGGGCAGGGCCTGCGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR TCA 90 bp CGCCGCAGGCCCTGCCCCTTTCGCCGTCGCCGACCAATTGCCGCCCGAAGACCGAAAAGTTTACAGAGATaGTCACGTGATGCTGTGAGT +
Preference number: 4 (lower is better)
Translates to: RRRPCPFRRRRPIAARRPKSLQR*SRDAVS
Trigger: ACTCACAGCATCACGTGATCATCTCTGTAAACTTTT...CGGTCTTCGGGCGGCAATTGGTCGGCGACGGCGAAAGGGGCAGGGCCTGCGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR TCA 90 bp CCTTTCGCCGTCGCCGACCAATTGCCGCCCGAAGACCGAACCGCTTCAGCGGAGGCAAAAAGTCCTTCATaGACAGGATGCCAGGCCACA +
Preference number: 4 (lower is better)
Translates to: PFAVADQLPPEDRTASAEAKSPS*TGCQAT
Trigger: TGTGGCCTGGCATCCTGTTCATGAAGGACTTTTTGC...CTCCGCTGAAGCGGTTCGGTCTTCGGGCGGCAATTGGTCGGCGACGGCGAAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR GCA 90 bp GCGCAAGTTCGCGCTGCTCTGGTCACTGGGCTCGGCGCTGGCGTTGGCGGGAAGCATTCCTGGAATTACTaGCAGGCTATTAGGTTCGAG +
Preference number: 4 (lower is better)
Translates to: AQVRAALVTGLGAGVGGKHSWNY*QAIRFE
Trigger: CTCGAACCTAATAGCCTGGCAGTAATTCCAGGAATG...CTTCCCGCCAACGCCAGCGCCGAGCCCAGTGACCAGAGCAGCGCGAACTTGCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR GCA 90 bp CCTTTCGCCGTCGCCGACCAATTGCCGCCCGAAGACCGAACCGCTTCAGCGGAGCATCAGCAACAACCGTaGATTCCTTGGCAGATGGGA +
Preference number: 4 (lower is better)
Translates to: PFAVADQLPPEDRTASAEHQQQP*IPWQMG
Trigger: TCCCATCTGCCAAGGAATGCACGGTTGTTGCTGATG...CTCCGCTGAAGCGGTTCGGTCTTCGGGCGGCAATTGGTCGGCGACGGCGAAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR GCA 90 bp CCTTTCGCCGTCGCCGACCAATTGCCGCCCGAAGACCGAACCGCTTCAGCGGAGGATGTCAGCTTTTTGTaGTGGACTTGGCACACGCTC +
Preference number: 4 (lower is better)
Translates to: PFAVADQLPPEDRTASAEDVSFL*WTWHTL
Trigger: GAGCGTGTGCCAAGTCCAGCACAAAAAGCTGACATC...CTCCGCTGAAGCGGTTCGGTCTTCGGGCGGCAATTGGTCGGCGACGGCGAAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR GCA 90 bp TCTAAGCAACCATTGAAACTTCCAGCACCAGCGGCCAGGTACTGTGGCTCAGATCGGCGTGCGGACGCCTaGTGCGCTGCGAAGAAGCGC +
Preference number: 4 (lower is better)
Translates to: SKQPLKLPAPAARYCGSDRRADA*CAAKKR
Trigger: GCGCTTCTTCGCAGCGCAGCAGGCGTCCGCACGCCG...ATCTGAGCCACAGTACCTGGCCGCTGGTGCTGGAAGTTTCAATGGTTGCTTAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CCA 90 bp CTTGGGGACACCACAAAAGTCCGCAGAGCAGGCACCGCGGCACTTCCGCGAGCGCCCCTGCATTCCTCTTaGATTCAATCCCATCAGAGG +
Preference number: 4 (lower is better)
Translates to: LGDTTKVRRAGTAALPRAPLHSS*IQSHQR
Trigger: CCTCTGATGGGATTGAATCCAAGAGGAATGCAGGGG...CGCTCGCGGAAGTGCCGCGGTGCCTGCTCTGCGGACTTTTGTGGTGTCCCCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CCA 90 bp ACACAAGTGGCCAACATCCACACTGTAGGCTTGCAGGCTACCCGCCCTGAGATTGTTCTCCCGGGGGCCTaGAGGCCCCTGCATTCCTCT +
Preference number: 4 (lower is better)
Translates to: TQVANIHTVGLQATRPEIVLPGA*RPLHSS
Trigger: AGAGGAATGCAGGGGCCTCCAGGCCCCCGGGAGAAC...AATCTCAGGGCGGGTAGCCTGCAAGCCTACAGTGTGGATGTTGGCCACTTGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR TCA 90 bp CCTTTCGCCGTCGCCGACCAATTGCCGCCCGAAGACCGAACCGCTTCAGCGGAGGATGAGGGAGGAGGCTaGATTTGCTCAACTTGTTTC +
Preference number: 4 (lower is better)
Translates to: PFAVADQLPPEDRTASAEDEGGG*ICSTCF
Trigger: GAAACAAGTTGAGCAAATTCAGCCTCCTCCCTCATC...CTCCGCTGAAGCGGTTCGGTCTTCGGGCGGCAATTGGTCGGCGACGGCGAAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR TCA 90 bp TCTAAGCAACCATTGAAACTTCCAGCACCAGCGGCCAGGTACTGTGGCTCAGATCCCGACCTCGACCTCTaGGATCTCGTCCTCGGGCCG +
Preference number: 4 (lower is better)
Translates to: SKQPLKLPAPAARYCGSDPDLDL*DLVLGP
Trigger: CGGCCCGAGGACGAGATCTCAGAGGTCGAGGTCGGG...ATCTGAGCCACAGTACCTGGCCGCTGGTGCTGGAAGTTTCAATGGTTGCTTAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR TCA 90 bp GTGTTTCGGCCTAGCCGCGCTCTACGCACCGGTGTTGCTGCTGCGCGCGCGCAAAGCAGTGTATATGGCTaGCATTTTCTCACTCCACAG +
Preference number: 4 (lower is better)
Translates to: VFRPSRALRTGVAAARAQSSVYG*HFLTPQ
Trigger: CTGTGGAGTGAGAAAATGTCAGCCATATACACTGCT...TTGCGCGCGCGCAGCAGCAACACCGGTGCGTAGAGCGCGGCTAGGCCGAAACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR GCA 90 bp TCTAAGCAACCATTGAAACTTCCAGCACCAGCGGCCAGGTACTGTGGCTCAGATGTTCATCTCCGGGCCTaGGGCCTTCCCATGCCCCCG +
Preference number: 4 (lower is better)
Translates to: SKQPLKLPAPAARYCGSDVHLRA*GLPMPP
Trigger: CGGGGGCATGGGAAGGCCGCAGGCCCGGAGATGAAC...ATCTGAGCCACAGTACCTGGCCGCTGGTGCTGGAAGTTTCAATGGTTGCTTAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR GCA 90 bp CCTTTCGCCGTCGCCGACCAATTGCCGCCCGAAGACCGAACCGCTTCAGCGGAGCCTTGGCAGATGGGATaGGATGGAAACCAAAGGTTT +
Preference number: 4 (lower is better)
Translates to: PFAVADQLPPEDRTASAEPWQMG*DGNQRF
Trigger: AAACCTTTGGTTTCCATCGCATCCCATCTGCCAAGG...CTCCGCTGAAGCGGTTCGGTCTTCGGGCGGCAATTGGTCGGCGACGGCGAAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR GCA 90 bp CCTTTCGCCGTCGCCGACCAATTGCCGCCCGAAGACCGAACCGCTTCAGCGGAGGTTAGAAGTACGCCCTaGCGTAACACTGGTATTTCC +
Preference number: 4 (lower is better)
Translates to: PFAVADQLPPEDRTASAEVRSTP*RNTGIS
Trigger: GGAAATACCAGTGTTACGGCAGGGCGTACTTCTAAC...CTCCGCTGAAGCGGTTCGGTCTTCGGGCGGCAATTGGTCGGCGACGGCGAAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR GCA 90 bp CGCCGCAGGCCCTGCCCCTTTCGCCGTCGCCGACCAATTGCCGCCCGAAGACCGTTTCTTCGAGTTAGCTaGTCTTGTGATTTTTCTCAG +
Preference number: 4 (lower is better)
Translates to: RRRPCPFRRRRPIAARRPFLRVS*SCDFSQ
Trigger: CTGAGAAAAATCACAAGAGCAGCTAACTCGAAGAAA...CGGTCTTCGGGCGGCAATTGGTCGGCGACGGCGAAAGGGGCAGGGCCTGCGGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR GCA 90 bp TCTAAGCAACCATTGAAACTTCCAGCACCAGCGGCCAGGTACTGTGGCTCAGATGACTGCACGCCGCTGTaGGGAAGCCCGTGGCGAAGG +
Preference number: 4 (lower is better)
Translates to: SKQPLKLPAPAARYCGSDDCTPL*GSPWRR
Trigger: CCTTCGCCACGGGCTTCCGCACAGCGGCGTGCAGTC...ATCTGAGCCACAGTACCTGGCCGCTGGTGCTGGAAGTTTCAATGGTTGCTTAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR GCA 90 bp ACACAAGTGGCCAACATCCACACTGTAGGCTTGCAGGCTACCCGCCCTGAGATTTCTACGCACCGGTGTTaGTGCTGCGCGCGCGCAAGT +
Preference number: 4 (lower is better)
Translates to: TQVANIHTVGLQATRPEISTHRC*CCARAS
Trigger: ACTTGCGCGCGCGCAGCAGCAACACCGGTGCGTAGA...AATCTCAGGGCGGGTAGCCTGCAAGCCTACAGTGTGGATGTTGGCCACTTGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CCA 90 bp ACACAAGTGGCCAACATCCACACTGTAGGCTTGCAGGCTACCCGCCCTGAGATTCGCCATCTTCCCCTATaGGCCACCGAACGCACGCTC +
Preference number: 4 (lower is better)
Translates to: TQVANIHTVGLQATRPEIRHLPL*ATERTL
Trigger: GAGCGTGCGTTCGGTGGCCCATAGGGGAAGATGGCG...AATCTCAGGGCGGGTAGCCTGCAAGCCTACAGTGTGGATGTTGGCCACTTGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CCA 90 bp CCTTTCGCCGTCGCCGACCAATTGCCGCCCGAAGACCGAACCGCTTCAGCGGAGTTGCTGGAATGGTATTaGCCCTTGAGATGGATGTGG +
Preference number: 4 (lower is better)
Translates to: PFAVADQLPPEDRTASAELLEWY*PLRWMW
Trigger: CCACATCCATCTCAAGGGCCAATACCATTCCAGCAA...CTCCGCTGAAGCGGTTCGGTCTTCGGGCGGCAATTGGTCGGCGACGGCGAAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR TCA 90 bp CCTTTCGCCGTCGCCGACCAATTGCCGCCCGAAGACCGAACCGCTTCAGCGGAGGTGTTTTTATGGGCATaGAGTGTTGCAAGACTCTGC +
Preference number: 4 (lower is better)
Translates to: PFAVADQLPPEDRTASAEVFLWA*SVARLC
Trigger: GCAGAGTCTTGCAACACTTCATGCCCATAAAAACAC...CTCCGCTGAAGCGGTTCGGTCTTCGGGCGGCAATTGGTCGGCGACGGCGAAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR GCA 90 bp CTTGGGGACACCACAAAAGTCCGCAGAGCAGGCACCGCGGCACTTCCGCGAGCGAATCGCCTCCTTATGTaGCTGGAACATCTTGACGTT +
Preference number: 4 (lower is better)
Translates to: LGDTTKVRRAGTAALPRANRLLM*LEHLDV
Trigger: AACGTCAAGATGTTCCAGGCACATAAGGAGGCGATT...CGCTCGCGGAAGTGCCGCGGTGCCTGCTCTGCGGACTTTTGTGGTGTCCCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR GCA 90 bp GTGTTTCGGCCTAGCCGCGCTCTACGCACCGGTGTTGCTGCTGCGCGCGCGCAAAGGACCACTTTTCTGTaGATTGGCTTGCACAATTTG +
Preference number: 4 (lower is better)
Translates to: VFRPSRALRTGVAAARAQRTTFL*IGLHNL
Trigger: CAAATTGTGCAAGCCAATGCACAGAAAAGTGGTCCT...TTGCGCGCGCGCAGCAGCAACACCGGTGCGTAGAGCGCGGCTAGGCCGAAACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR GCA 90 bp ACCACACCCACCCCTGCCTTCCAACTATTAATGCTGGCAGGACTTAGCCAGACCCCTGCCCTAACAGCCTaGGAGTCTAATCCGGGAGCG +
Preference number: 4 (lower is better)
Translates to: TTPTPAFQLLMLAGLSQTPALTA*ESNPGA
Trigger: CGCTCCCGGATTAGACTCGCAGGCTGTTAGGGCAGG...GGTCTGGCTAAGTCCTGCCAGCATTAATAGTTGGAAGGCAGGGGTGGGTGTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CCA 90 bp GCGCAAGTTCGCGCTGCTCTGGTCACTGGGCTCGGCGCTGGCGTTGGCGGGAAGATTCAGCACCTCATTTaGAGCAGGAATTGGAACTTT +
Preference number: 4 (lower is better)
Translates to: AQVRAALVTGLGAGVGGKIQHLI*SRNWNF
Trigger: AAAGTTCCAATTCCTGCTCCAAATGAGGTGCTGAAT...CTTCCCGCCAACGCCAGCGCCGAGCCCAGTGACCAGAGCAGCGCGAACTTGCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CCA 90 bp CTTGGGGACACCACAAAAGTCCGCAGAGCAGGCACCGCGGCACTTCCGCGAGCGGCAGATGGGATGCGATaGAAACCAAAGGTTTCCTTA +
Preference number: 4 (lower is better)
Translates to: LGDTTKVRRAGTAALPRAADGMR*KPKVSL
Trigger: TAAGGAAACCTTTGGTTTCCATCGCATCCCATCTGC...CGCTCGCGGAAGTGCCGCGGTGCCTGCTCTGCGGACTTTTGTGGTGTCCCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CCA 90 bp GCGCAAGTTCGCGCTGCTCTGGTCACTGGGCTCGGCGCTGGCGTTGGCGGGAAGACAAGGAATTTGCCATaGACAAGATCTATCTGGCTT +
Preference number: 4 (lower is better)
Translates to: AQVRAALVTGLGAGVGGKTRNLP*TRSIWL
Trigger: AAGCCAGATAGATCTTGTCCATGGCAAATTCCTTGT...CTTCCCGCCAACGCCAGCGCCGAGCCCAGTGACCAGAGCAGCGCGAACTTGCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR GCA 90 bp TCTAAGCAACCATTGAAACTTCCAGCACCAGCGGCCAGGTACTGTGGCTCAGATGGCCCCCTCGGCCTTTaGCTCCTCGGTCTTCAGAAG +
Preference number: 4 (lower is better)
Translates to: SKQPLKLPAPAARYCGSDGPLGL*LLGLQK
Trigger: CTTCTGAAGACCGAGGAGGCAAAGGCCGAGGGGGCC...ATCTGAGCCACAGTACCTGGCCGCTGGTGCTGGAAGTTTCAATGGTTGCTTAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CCA 90 bp ACACAAGTGGCCAACATCCACACTGTAGGCTTGCAGGCTACCCGCCCTGAGATTCTGTCCCTGTGGACCTaGAGGCCCCATTTGAGCCAT +
Preference number: 4 (lower is better)
Translates to: TQVANIHTVGLQATRPEILSLWT*RPHLSH
Trigger: ATGGCTCAAATGGGGCCTCCAGGTCCACAGGGACAG...AATCTCAGGGCGGGTAGCCTGCAAGCCTACAGTGTGGATGTTGGCCACTTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CCA 90 bp ACACAAGTGGCCAACATCCACACTGTAGGCTTGCAGGCTACCCGCCCTGAGATTTTCAGAAGGGCCTCCTaGGGCCTCCATCTCTCTGTG +
Preference number: 4 (lower is better)
Translates to: TQVANIHTVGLQATRPEIFRRAS*GLHLSV
Trigger: CACAGAGAGATGGAGGCCCCAGGAGGCCCTTCTGAA...AATCTCAGGGCGGGTAGCCTGCAAGCCTACAGTGTGGATGTTGGCCACTTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR GCA 90 bp CCTTTCGCCGTCGCCGACCAATTGCCGCCCGAAGACCGAACCGCTTCAGCGGAGAGTAAGCTGTTGCATTaGTTGCTGTTGTGCAAAATC +
Preference number: 4 (lower is better)
Translates to: PFAVADQLPPEDRTASAESKLLH*LLLCKI
Trigger: GATTTTGCACAACAGCAAGCAATGCAACAGCTTACT...CTCCGCTGAAGCGGTTCGGTCTTCGGGCGGCAATTGGTCGGCGACGGCGAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR GCA 90 bp GCGCAAGTTCGCGCTGCTCTGGTCACTGGGCTCGGCGCTGGCGTTGGCGGGAAGTTGTTCATGTTCGACTaGCAATATTTCACATATCCT +
Preference number: 4 (lower is better)
Translates to: AQVRAALVTGLGAGVGGKLFMFD*QYFTYP
Trigger: AGGATATGTGAAATATTGGCAGTCGAACATGAACAA...CTTCCCGCCAACGCCAGCGCCGAGCCCAGTGACCAGAGCAGCGCGAACTTGCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CCA 90 bp GTGTTTCGGCCTAGCCGCGCTCTACGCACCGGTGTTGCTGCTGCGCGCGCGCAAATCCCAGAACTTGATTaGCTGTTGACTATCTTTACT +
Preference number: 4 (lower is better)
Translates to: VFRPSRALRTGVAAARAQIPELD*LLTIFT
Trigger: AGTAAAGATAGTCAACAGCCAATCAAGTTCTGGGAT...TTGCGCGCGCGCAGCAGCAACACCGGTGCGTAGAGCGCGGCTAGGCCGAAACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CCA 90 bp ACACAAGTGGCCAACATCCACACTGTAGGCTTGCAGGCTACCCGCCCTGAGATTACCAGAACTACCTTGTaGTCCAGGTGGCCCTTGAGG +
Preference number: 4 (lower is better)
Translates to: TQVANIHTVGLQATRPEITRTTL*SRWPLR
Trigger: CCTCAAGGGCCACCTGGACCACAAGGTAGTTCTGGT...AATCTCAGGGCGGGTAGCCTGCAAGCCTACAGTGTGGATGTTGGCCACTTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CCA 90 bp CTTGGGGACACCACAAAAGTCCGCAGAGCAGGCACCGCGGCACTTCCGCGAGCGAGGAACTTAAATTTGTaGAGATGCCCCATGTCTTGT +
Preference number: 4 (lower is better)
Translates to: LGDTTKVRRAGTAALPRARNLNL*RCPMSC
Trigger: ACAAGACATGGGGCATCTCCACAAATTTAAGTTCCT...CGCTCGCGGAAGTGCCGCGGTGCCTGCTCTGCGGACTTTTGTGGTGTCCCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CCA 90 bp CCTTTCGCCGTCGCCGACCAATTGCCGCCCGAAGACCGAACCGCTTCAGCGGAGATCTTGATATGGGTTTaGTCTCTGGATCCGGTTTTA +
Preference number: 4 (lower is better)
Translates to: PFAVADQLPPEDRTASAEILIWV*SLDPVL
Trigger: TAAAACCGGATCCAGAGACCAAACCCATATCAAGAT...CTCCGCTGAAGCGGTTCGGTCTTCGGGCGGCAATTGGTCGGCGACGGCGAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CCA 90 bp TCTAAGCAACCATTGAAACTTCCAGCACCAGCGGCCAGGTACTGTGGCTCAGATGTGATCCCAGCTACTTaGGGTGGGGCTGAGGTGGGA +
Preference number: 4 (lower is better)
Translates to: SKQPLKLPAPAARYCGSDVIPAT*GGAEVG
Trigger: TCCCACCTCAGCCCCACCCCAAGTAGCTGGGATCAC...ATCTGAGCCACAGTACCTGGCCGCTGGTGCTGGAAGTTTCAATGGTTGCTTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CCA 90 bp TGCAGGCTTCCTTTTGTTTCTCTTGGTGAGTCCACAAGAAGTTCTTACATACTGAGGTGGCCGCGCTGCTaGCCGCGCTGGTTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: CRLPFVSLGESTRSSYILRWPRC*PRWLGC
Trigger: GCAGCCCAACCAGCGCGGCCAGCAGCGCGGCCACCT...CAGTATGTAAGAACTTCTTGTGGACTCACCAAGAGAAACAAAAGGAAGCCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CCA 90 bp ACACAAGTGGCCAACATCCACACTGTAGGCTTGCAGGCTACCCGCCCTGAGATTTGCGACCACGGTACTTaGGGACACCACAAAAGTCCG +
Preference number: 4 (lower is better)
Translates to: TQVANIHTVGLQATRPEICDHGT*GHHKSP
Trigger: CGGACTTTTGTGGTGTCCCCAAGTACCGTGGTCGCA...AATCTCAGGGCGGGTAGCCTGCAAGCCTACAGTGTGGATGTTGGCCACTTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR CAA 72 bp CCAGCCAGGCTGGTAGCTGGCAGCAGTCTCTTCATCTaGAAGACCTCATTGAGGGTTCCTGGGATTCAGGTG +
Preference number: 4 (lower is better)
Translates to: PARLVAGSSLFI*KTSLRVPGIQV
Trigger: CACCTGAATCCCAGGAACCCTCAATGAGGTCTTCAAGATGAAGAGACTGCTGCCAGCTACCAGCCTGGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR TCA 90 bp ACCACACCCACCCCTGCCTTCCAACTATTAATGCTGGCAGGACTTAGCCAGACCGCAGGCTACCCGCCCTaGGATTTGGTAAAGAACACT +
Preference number: 4 (lower is better)
Translates to: TTPTPAFQLLMLAGLSQTAGYPP*DLVKNT
Trigger: AGTGTTCTTTACCAAATCTCAGGGCGGGTAGCCTGC...GGTCTGGCTAAGTCCTGCCAGCATTAATAGTTGGAAGGCAGGGGTGGGTGTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR GCA 90 bp GTGTTTCGGCCTAGCCGCGCTCTACGCACCGGTGTTGCTGCTGCGCGCGCGCAACTTTCAATTTTAAGTTaGTCCAGAAGTTGTGGGTTA +
Preference number: 4 (lower is better)
Translates to: VFRPSRALRTGVAAARAQLSILS*SRSCGL
Trigger: TAACCCACAACTTCTGGAGCAACTTAAAATTGAAAG...TTGCGCGCGCGCAGCAGCAACACCGGTGCGTAGAGCGCGGCTAGGCCGAAACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR GCA 90 bp TGCCCAGAAAAGAGTTCAGGGCTACAATGGTGCAGGCTTCCTTTTGTTTCTCTTACGCACCGGTGTTGCTaGTGCGCGCGCGCAAGTTCG +
Preference number: 4 (lower is better)
Translates to: CPEKSSGLQWCRLPFVSLTHRCC*CARASS
Trigger: CGAACTTGCGCGCGCGCAGCAGCAACACCGGTGCGT...AAGAGAAACAAAAGGAAGCCTGCACCATTGTAGCCCTGAACTCTTTTCTGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CCA 90 bp TCTAAGCAACCATTGAAACTTCCAGCACCAGCGGCCAGGTACTGTGGCTCAGATGGTCCCATTTGTCCCTaGGGTCCAGGAGGCCTAAAC +
Preference number: 4 (lower is better)
Translates to: SKQPLKLPAPAARYCGSDGPICP*GPGGLN
Trigger: GTTTAGGCCTCCTGGACCCCAGGGACAAATGGGACC...ATCTGAGCCACAGTACCTGGCCGCTGGTGCTGGAAGTTTCAATGGTTGCTTAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CCA 90 bp TCTAAGCAACCATTGAAACTTCCAGCACCAGCGGCCAGGTACTGTGGCTCAGATCAGTGGAGGACCTTGTaGTCCCATTTGTCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: SKQPLKLPAPAARYCGSDQWRTL*SHLSLG
Trigger: CCCCAGGGACAAATGGGACCACAAGGTCCTCCACTG...ATCTGAGCCACAGTACCTGGCCGCTGGTGCTGGAAGTTTCAATGGTTGCTTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CCA 90 bp TCTAAGCAACCATTGAAACTTCCAGCACCAGCGGCCAGGTACTGTGGCTCAGATACCTTGTGGTCCAGGTaGCCCTTGAGGTCCCAAAGG +
Preference number: 4 (lower is better)
Translates to: SKQPLKLPAPAARYCGSDTLWSR*PLRSQR
Trigger: CCTTTGGGACCTCAAGGGCCACCTGGACCACAAGGT...ATCTGAGCCACAGTACCTGGCCGCTGGTGCTGGAAGTTTCAATGGTTGCTTAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CCA 90 bp ACACAAGTGGCCAACATCCACACTGTAGGCTTGCAGGCTACCCGCCCTGAGATTAAGCGCTTGTCAGGGTaGAAGTCATCTGGTCTGCTG +
Preference number: 4 (lower is better)
Translates to: TQVANIHTVGLQATRPEIKRLSG*KSSGLL
Trigger: CAGCAGACCAGATGACTTCCACCCTGACAAGCGCTT...AATCTCAGGGCGGGTAGCCTGCAAGCCTACAGTGTGGATGTTGGCCACTTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CCA 90 bp ACACAAGTGGCCAACATCCACACTGTAGGCTTGCAGGCTACCCGCCCTGAGATTTCCATCCCAGGAATCTaGCTTCCGCCCTCCTTCAAA +
Preference number: 4 (lower is better)
Translates to: TQVANIHTVGLQATRPEISIPGI*LPPSFK
Trigger: TTTGAAGGAGGGCGGAAGCCAGATTCCTGGGATGGA...AATCTCAGGGCGGGTAGCCTGCAAGCCTACAGTGTGGATGTTGGCCACTTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CCA 90 bp ACCACACCCACCCCTGCCTTCCAACTATTAATGCTGGCAGGACTTAGCCAGACCGCCATGTCCATGCCTTaGAGAGAAGAGGAGCGTTCT +
Preference number: 4 (lower is better)
Translates to: TTPTPAFQLLMLAGLSQTAMSMP*REEERS
Trigger: AGAACGCTCCTCTTCTCTCCAAGGCATGGACATGGC...GGTCTGGCTAAGTCCTGCCAGCATTAATAGTTGGAAGGCAGGGGTGGGTGTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CCA 90 bp TGCAGGCTTCCTTTTGTTTCTCTTGGTGAGTCCACAAGAAGTTCTTACATACTGCGCTGTTCGCCGCGCTaGGCCTTCGCAGCACGCTGC +
Preference number: 4 (lower is better)
Translates to: CRLPFVSLGESTRSSYILRCSPR*AFAARC
Trigger: GCAGCGTGCTGCGAAGGCCCAGCGCGGCGAACAGCG...CAGTATGTAAGAACTTCTTGTGGACTCACCAAGAGAAACAAAAGGAAGCCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR TCA 90 bp TCTAAGCAACCATTGAAACTTCCAGCACCAGCGGCCAGGTACTGTGGCTCAGATGGCTGCAGTGAACTGTaGTCACACCACTGCACCACA +
Preference number: 4 (lower is better)
Translates to: SKQPLKLPAPAARYCGSDGCSEL*SHHCTT
Trigger: TGTGGTGCAGTGGTGTGATCACAGTTCACTGCAGCC...ATCTGAGCCACAGTACCTGGCCGCTGGTGCTGGAAGTTTCAATGGTTGCTTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR GCA 90 bp TGCAGGCTTCCTTTTGTTTCTCTTGGTGAGTCCACAAGAAGTTCTTACATACTGGGCCGAGCTGAGGACTaGACGCCGCTGTGCGGAAGC +
Preference number: 4 (lower is better)
Translates to: CRLPFVSLGESTRSSYILGRAED*TPLCGS
Trigger: GCTTCCGCACAGCGGCGTGCAGTCCTCAGCTCGGCC...CAGTATGTAAGAACTTCTTGTGGACTCACCAAGAGAAACAAAAGGAAGCCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR GCA 90 bp TGCAGGCTTCCTTTTGTTTCTCTTGGTGAGTCCACAAGAAGTTCTTACATACTGCCGGCCTCGCCAAGGTaGTGCCCGTGTGAGGACCTC +
Preference number: 4 (lower is better)
Translates to: CRLPFVSLGESTRSSYILPASPR*CPCEDL
Trigger: GAGGTCCTCACACGGGCAGCACCTTGGCGAGGCCGG...CAGTATGTAAGAACTTCTTGTGGACTCACCAAGAGAAACAAAAGGAAGCCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR GCA 90 bp GCCAGAAGGTATGAGCCTAACATTCTGATGAGTCCAGAAAACTACGTTTTGTCACGTGCGGACGCCTGCTaGGCTGCGAAGAAGCGCCGT +
Preference number: 4 (lower is better)
Translates to: ARRYEPNILMSPENYVLSRADAC*AAKKRR
Trigger: ACGGCGCTTCTTCGCAGCGCAGCAGGCGTCCGCACG...TGACAAAACGTAGTTTTCTGGACTCATCAGAATGTTAGGCTCATACCTTCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CCA 90 bp ACACAAGTGGCCAACATCCACACTGTAGGCTTGCAGGCTACCCGCCCTGAGATTGGGAAGCTCCCTCGTTaGACATCCAGAAGATTGCAT +
Preference number: 4 (lower is better)
Translates to: TQVANIHTVGLQATRPEIGKLPR*TSRRLH
Trigger: ATGCAATCTTCTGGATGTCCAACGAGGGAGCTTCCC...AATCTCAGGGCGGGTAGCCTGCAAGCCTACAGTGTGGATGTTGGCCACTTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR TCA 90 bp TCTAAAGGGCATGTGACTTTATTTCTGACTAACATCAAGTTCCTCTCCTCATCACCTTCCACCACCCCGTaGAGCTCCTCGCCTCGGCGG +
Preference number: 4 (lower is better)
Translates to: SKGHVTLFLTNIKFLSSSPSTTP*SSSPRR
Trigger: CCGCCGAGGCGAGGAGCTTCACGGGGTGGTGGAAGG...TGATGAGGAGAGGAACTTGATGTTAGTCAGAAATAAAGTCACATGCCCTTTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR TCA 90 bp ACACAAGTGGCCAACATCCACACTGTAGGCTTGCAGGCTACCCGCCCTGAGATTCCAGTTGGGGGTGAGTaGAGAAATACCCATAACCTA +
Preference number: 4 (lower is better)
Translates to: TQVANIHTVGLQATRPEIPVGGE*RNTHNL
Trigger: TAGGTTATGGGTATTTCTTCACTCACCCCCAACTGG...AATCTCAGGGCGGGTAGCCTGCAAGCCTACAGTGTGGATGTTGGCCACTTGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR GCA 90 bp TCTAAGCAACCATTGAAACTTCCAGCACCAGCGGCCAGGTACTGTGGCTCAGATTGGTATCCATCGTGGTaGTCTCCGTCTAAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: SKQPLKLPAPAARYCGSDWYPSW*SPSKEL
Trigger: CAGCTCCTTAGACGGAGAGCACCACGATGGATACCA...ATCTGAGCCACAGTACCTGGCCGCTGGTGCTGGAAGTTTCAATGGTTGCTTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR GCA 90 bp CATCCAGAAGATTGCATTTTCTCTTCAGAGTACAATTTTCCATCTGTCAGAGCATCCGGGAGCGGCTGCTaGCAGCGGAGGCGACAGCAG +
Preference number: 4 (lower is better)
Translates to: HPEDCIFSSEYNFPSVRASGSGC*QRRRQQ
Trigger: CTGCTGTCGCCTCCGCTGGCAGCAGCCGCTCCCGGA...TGCTCTGACAGATGGAAAATTGTACTCTGAAGAGAAAATGCAATCTTCTGGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR GCA 90 bp AAGAAACAAGAGAGATTCTGTGTACCCTTTACCCATTCCTCCATGTTGCAAAACGCCTCGCCAAGGTGCTaGCCGTGTGAGGACCTCGCG +
Preference number: 4 (lower is better)
Translates to: KKQERFCVPFTHSSMLQNASPRC*PCEDLA
Trigger: CGCGAGGTCCTCACACGGGCAGCACCTTGGCGAGGC...GTTTTGCAACATGGAGGAATGGGTAAAGGGTACACAGAATCTCTCTTGTTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR GCA 90 bp CATCCAGAAGATTGCATTTTCTCTTCAGAGTACAATTTTCCATCTGTCAGAGCACGTCCCGGCCCGCGCTaGTCTACATGGCAGCGCTGG +
Preference number: 4 (lower is better)
Translates to: HPEDCIFSSEYNFPSVRARPGPR*STWQRW
Trigger: CCAGCGCTGCCATGTAGAGCAGCGCGGGCCGGGACG...TGCTCTGACAGATGGAAAATTGTACTCTGAAGAGAAAATGCAATCTTCTGGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR GCA 90 bp GCCAGAAGGTATGAGCCTAACATTCTGATGAGTCCAGAAAACTACGTTTTGTCACCGTCGCCGACCAATTaGCGCCCGAAGACCGAACCG +
Preference number: 4 (lower is better)
Translates to: ARRYEPNILMSPENYVLSPSPTN*RPKTEP
Trigger: CGGTTCGGTCTTCGGGCGGCAATTGGTCGGCGACGG...TGACAAAACGTAGTTTTCTGGACTCATCAGAATGTTAGGCTCATACCTTCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CCA 90 bp TCTAAGCAACCATTGAAACTTCCAGCACCAGCGGCCAGGTACTGTGGCTCAGATGCCAGGCCACAGCTGTaGCTTCTTTCTTATGACCTC +
Preference number: 4 (lower is better)
Translates to: SKQPLKLPAPAARYCGSDARPQL*LLSYDL
Trigger: GAGGTCATAAGAAAGAAGCCACAGCTGTGGCCTGGC...ATCTGAGCCACAGTACCTGGCCGCTGGTGCTGGAAGTTTCAATGGTTGCTTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CCA 90 bp TGCCCAGAAAAGAGTTCAGGGCTACAATGGTGCAGGCTTCCTTTTGTTTCTCTTGCGTTCTCTGCTGGCTaGGGAATGACCGTCGTGAGG +
Preference number: 4 (lower is better)
Translates to: CPEKSSGLQWCRLPFVSLAFSAG*GMTVVR
Trigger: CCTCACGACGGTCATTCCCCAGCCAGCAGAGAACGC...AAGAGAAACAAAAGGAAGCCTGCACCATTGTAGCCCTGAACTCTTTTCTGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CCA 90 bp CATCCAGAAGATTGCATTTTCTCTTCAGAGTACAATTTTCCATCTGTCAGAGCACCGCGCTGCTCTACATaGCAGCGCTGGGCGCCACGC +
Preference number: 4 (lower is better)
Translates to: HPEDCIFSSEYNFPSVRAPRCST*QRWAPR
Trigger: GCGTGGCGCCCAGCGCTGCCATGTAGAGCAGCGCGG...TGCTCTGACAGATGGAAAATTGTACTCTGAAGAGAAAATGCAATCTTCTGGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CCA 90 bp TGCAGGCTTCCTTTTGTTTCTCTTGGTGAGTCCACAAGAAGTTCTTACATACTGCCGCCTTGTCCAAGATaGCGGACCTCCACCGCCAGC +
Preference number: 4 (lower is better)
Translates to: CRLPFVSLGESTRSSYILPPCPR*RTSTAS
Trigger: GCTGGCGGTGGAGGTCCGCCATCTTGGACAAGGCGG...CAGTATGTAAGAACTTCTTGTGGACTCACCAAGAGAAACAAAAGGAAGCCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR TCA 90 bp TCTAAAGGGCATGTGACTTTATTTCTGACTAACATCAAGTTCCTCTCCTCATCAGGCCCATGCATGTCCTaGGGCCGTGGCAACCCCTGG +
Preference number: 4 (lower is better)
Translates to: SKGHVTLFLTNIKFLSSSGPCMS*GRGNPW
Trigger: CCAGGGGTTGCCACGGCCTCAGGACATGCATGGGCC...TGATGAGGAGAGGAACTTGATGTTAGTCAGAAATAAAGTCACATGCCCTTTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR TCA 90 bp AAGAAACAAGAGAGATTCTGTGTACCCTTTACCCATTCCTCCATGTTGCAAAACGGGAGGTCCCAGCATTaGTCCTTGGGGTGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: KKQERFCVPFTHSSMLQNGRSQH*SLGWRP
Trigger: GGGCCTCCACCCCAAGGATCAATGCTGGGACCTCCC...GTTTTGCAACATGGAGGAATGGGTAAAGGGTACACAGAATCTCTCTTGTTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR TCA 90 bp TGCCCAGAAAAGAGTTCAGGGCTACAATGGTGCAGGCTTCCTTTTGTTTCTCTTGCGGGGCTCCTCTTCTaGAACTTTCTTCTCTGCGCC +
Preference number: 4 (lower is better)
Translates to: CPEKSSGLQWCRLPFVSLAGLLF*NFLLCA
Trigger: GGCGCAGAGAAGAAAGTTTCAGAAGAGGAGCCCCGC...AAGAGAAACAAAAGGAAGCCTGCACCATTGTAGCCCTGAACTCTTTTCTGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR TCA 90 bp TCTAAGCAACCATTGAAACTTCCAGCACCAGCGGCCAGGTACTGTGGCTCAGATCTATCTGGCTTACTGTaGGTTAGAAGTACGCCCTGC +
Preference number: 4 (lower is better)
Translates to: SKQPLKLPAPAARYCGSDLSGLL*VRSTPC
Trigger: GCAGGGCGTACTTCTAACTCACAGTAAGCCAGATAG...ATCTGAGCCACAGTACCTGGCCGCTGGTGCTGGAAGTTTCAATGGTTGCTTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR GCA 90 bp TCTAAGCAACCATTGAAACTTCCAGCACCAGCGGCCAGGTACTGTGGCTCAGATATATGCCCAAGAGGATaGCAAGCCAGACTCCAGATC +
Preference number: 4 (lower is better)
Translates to: SKQPLKLPAPAARYCGSDICPRG*QARLQI
Trigger: GATCTGGAGTCTGGCTTGGCATCCTCTTGGGCATAT...ATCTGAGCCACAGTACCTGGCCGCTGGTGCTGGAAGTTTCAATGGTTGCTTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR GCA 90 bp CTGTATCTGGTGGAAACCATGGATTTCTACAAGCTCGAATTATTCCTCATTGTAGGAGCACGGCCCTCATaGCTCGGCGGGGCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: LYLVETMDFYKLELFLIVGARPS*LGGAPL
Trigger: AAGAGGAGCCCCGCCGAGGCATGAGGGCCGTGCTCC...TACAATGAGGAATAATTCGAGCTTGTAGAAATCCATGGTTTCCACCAGATACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CCA 90 bp AGTGTCAATATGTTGGGAACAAGTACCCTGGCTACAAGGAAGGAAAAGGAATACCGCCATCTTCCCCTATaGGCCACCGAACGCACGCTC +
Preference number: 4 (lower is better)
Translates to: SVNMLGTSTLATRKEKEYRHLPL*ATERTL
Trigger: GAGCGTGCGTTCGGTGGCCCATAGGGGAAGATGGCG...GTATTCCTTTTCCTTCCTTGTAGCCAGGGTACTTGTTCCCAACATATTGACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409658.7
CDS-3UTR CCA 90 bp CAGAAAGCAGCAGCAAAGTCCGCTGTAAGAAAGAGTACTCTGAGGTGTGTGTGTAGCTGTCGAGGTGCCTaGTGCTGGAACCTTGGCATA +
Preference number: 4 (lower is better)
Translates to: QKAAAKSAVRKSTLRCVCSCRGA*CWNLGI
Trigger: TATGCCAAGGTTCCAGCACCAGGCACCTCGACAGCT...ACACACACACCTCAGAGTACTCTTTCTTACAGCGGACTTTGCTGCTGCTTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393006.5
CDS-3UTR CCA 90 bp ACCACACCCACCCCTGCCTTCCAACTATTAATGCTGGCAGGACTTAGCCAGACCTCGCATTTTATCACCTaGTCGGTTTCGAGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: TTPTPAFQLLMLAGLSQTSHFIT*SVSSPE
Trigger: TTCTGGACTCGAAACCGACCAGGTGATAAAATGCGA...GGTCTGGCTAAGTCCTGCCAGCATTAATAGTTGGAAGGCAGGGGTGGGTGTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CCA 90 bp TGCAGGCTTCCTTTTGTTTCTCTTGGTGAGTCCACAAGAAGTTCTTACATACTGGCCCATGTGATGGTTTaGAGGGCCGCGGGAGTCACC +
Preference number: 4 (lower is better)
Translates to: CRLPFVSLGESTRSSYILAHVMV*RAAGVT
Trigger: GGTGACTCCCGCGGCCCTCCAAACCATCACATGGGC...CAGTATGTAAGAACTTCTTGTGGACTCACCAAGAGAAACAAAAGGAAGCCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CCA 90 bp TCTAAGCAACCATTGAAACTTCCAGCACCAGCGGCCAGGTACTGTGGCTCAGATGGAACTCGTCAGGAGTaGGAAGTAAACCCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: SKQPLKLPAPAARYCGSDGTRQE*EVNPSF
Trigger: GAAGGAAGGGTTTACTTCCCACTCCTGACGAGTTCC...ATCTGAGCCACAGTACCTGGCCGCTGGTGCTGGAAGTTTCAATGGTTGCTTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CCA 90 bp ACACAAGTGGCCAACATCCACACTGTAGGCTTGCAGGCTACCCGCCCTGAGATTTCAACATTTCTCAGCTaGTGGCTCACACCTGTAATC +
Preference number: 4 (lower is better)
Translates to: TQVANIHTVGLQATRPEISTFLS*WLTPVI
Trigger: GATTACAGGTGTGAGCCACCAGCTGAGAAATGTTGA...AATCTCAGGGCGGGTAGCCTGCAAGCCTACAGTGTGGATGTTGGCCACTTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR TCA 90 bp ACCACACCCACCCCTGCCTTCCAACTATTAATGCTGGCAGGACTTAGCCAGACCTTTATTATCCGTGGGTaGGAAACTGGCCTCTCTAAT +
Preference number: 4 (lower is better)
Translates to: TTPTPAFQLLMLAGLSQTFIIRG*ETGLSN
Trigger: ATTAGAGAGGCCAGTTTCTCACCCACGGATAATAAA...GGTCTGGCTAAGTCCTGCCAGCATTAATAGTTGGAAGGCAGGGGTGGGTGTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR TCA 90 bp AAGAAACAAGAGAGATTCTGTGTACCCTTTACCCATTCCTCCATGTTGCAAAACGGTCCCAAAGGGCCATaGGGTCCAGGATGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: KKQERFCVPFTHSSMLQNGPKGP*GPGCLC
Trigger: GCAGAGGCATCCTGGACCTCATGGCCCTTTGGGACC...GTTTTGCAACATGGAGGAATGGGTAAAGGGTACACAGAATCTCTCTTGTTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR TCA 90 bp CTGTATCTGGTGGAAACCATGGATTTCTACAAGCTCGAATTATTCCTCATTGTACCTTGGGGGCCTATGTaGCCCTGTGGGCCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: LYLVETMDFYKLELFLIVPWGPM*PCGPGG
Trigger: TCCACCTGGCCCACAGGGTCACATAGGCCCCCAAGG...TACAATGAGGAATAATTCGAGCTTGTAGAAATCCATGGTTTCCACCAGATACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR TCA 90 bp TCTAAAGGGCATGTGACTTTATTTCTGACTAACATCAAGTTCCTCTCCTCATCAGACATCGGGCCCATGTaGTGGTTTGGAGGGCCGCGG +
Preference number: 4 (lower is better)
Translates to: SKGHVTLFLTNIKFLSSSDIGPM*WFGGPR
Trigger: CCGCGGCCCTCCAAACCATCACATGGGCCCGATGTC...TGATGAGGAGAGGAACTTGATGTTAGTCAGAAATAAAGTCACATGCCCTTTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR TCA 90 bp ACCACACCCACCCCTGCCTTCCAACTATTAATGCTGGCAGGACTTAGCCAGACCTGGTTAATATGCTCATaGACATCAGCAACAACCGTG +
Preference number: 4 (lower is better)
Translates to: TTPTPAFQLLMLAGLSQTWLICS*TSATTV
Trigger: CACGGTTGTTGCTGATGTTCATGAGCATATTAACCA...GGTCTGGCTAAGTCCTGCCAGCATTAATAGTTGGAAGGCAGGGGTGGGTGTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR GCA 90 bp TATGAGTACCCATGGCCCATAGCCAGATACTCCAGTTGGACAGAGGATTTAAGAAAACAGCTGTCGAGGTaGCTGGTGCTGGAACCTTGG +
Preference number: 4 (lower is better)
Translates to: YEYPWPIARYSSWTEDLRKQLSR*LVLEPW
Trigger: CCAAGGTTCCAGCACCAGGCACCTCGACAGCTGTTT...TCTTAAATCCTCTGTCCAACTGGAGTATCTGGCTATGGGCCATGGGTACTCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393006.5
CDS-3UTR GCA 90 bp TGCCCAGAAAAGAGTTCAGGGCTACAATGGTGCAGGCTTCCTTTTGTTTCTCTTGAAGTGAGCCGTGATTaGACCACTGCACTCCTGGCT +
Preference number: 4 (lower is better)
Translates to: CPEKSSGLQWCRLPFVSLEVSRD*TTALLA
Trigger: AGCCAGGAGTGCAGTGGTGCAATCACGGCTCACTTC...AAGAGAAACAAAAGGAAGCCTGCACCATTGTAGCCCTGAACTCTTTTCTGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR GCA 90 bp GCCAGAAGGTATGAGCCTAACATTCTGATGAGTCCAGAAAACTACGTTTTGTCAGTGCCTGCTGCTGGCTaGACTGTGTTTCGGCCTAGC +
Preference number: 4 (lower is better)
Translates to: ARRYEPNILMSPENYVLSVPAAG*TVFRPS
Trigger: GCTAGGCCGAAACACAGTGCAGCCAGCAGCAGGCAC...TGACAAAACGTAGTTTTCTGGACTCATCAGAATGTTAGGCTCATACCTTCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR GCA 90 bp CATCCAGAAGATTGCATTTTCTCTTCAGAGTACAATTTTCCATCTGTCAGAGCAGCGGCGGGTGCCTGCTaGTGGCTGCACTGTGTTTCG +
Preference number: 4 (lower is better)
Translates to: HPEDCIFSSEYNFPSVRAAAGAC*WLHCVS
Trigger: CGAAACACAGTGCAGCCAGCAGCAGGCACCCGCCGC...TGCTCTGACAGATGGAAAATTGTACTCTGAAGAGAAAATGCAATCTTCTGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR GCA 90 bp TCTAAAGGGCATGTGACTTTATTTCTGACTAACATCAAGTTCCTCTCCTCATCAACCTCCACCGCCAGCTaGAGGAGTACCTGGCGCAGG +
Preference number: 4 (lower is better)
Translates to: SKGHVTLFLTNIKFLSSSTSTAS*RSTWRR
Trigger: CCTGCGCCAGGTACTCCTGCAGCTGGCGGTGGAGGT...TGATGAGGAGAGGAACTTGATGTTAGTCAGAAATAAAGTCACATGCCCTTTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CCA 90 bp ACACAAGTGGCCAACATCCACACTGTAGGCTTGCAGGCTACCCGCCCTGAGATTGGAACTGAGCAGGAATaGGTTTTGCATAAGGAACTT +
Preference number: 4 (lower is better)
Translates to: TQVANIHTVGLQATRPEIGTEQE*VLHKEL
Trigger: AAGTTCCTTATGCAAAACCCATTCCTGCTCAGTTCC...AATCTCAGGGCGGGTAGCCTGCAAGCCTACAGTGTGGATGTTGGCCACTTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CCA 90 bp TGCAGGCTTCCTTTTGTTTCTCTTGGTGAGTCCACAAGAAGTTCTTACATACTGAACCATCCCTTCCTCTaGGGGGAGCACGGCCCTCAT +
Preference number: 4 (lower is better)
Translates to: CRLPFVSLGESTRSSYILNHPFL*GEHGPH
Trigger: ATGAGGGCCGTGCTCCCCCCAGAGGAAGGGATGGTT...CAGTATGTAAGAACTTCTTGTGGACTCACCAAGAGAAACAAAAGGAAGCCTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CCA 90 bp TGCCCAGAAAAGAGTTCAGGGCTACAATGGTGCAGGCTTCCTTTTGTTTCTCTTCTCCGTCTAAGGAGCTaGAACGCCCAGATTTGGGCA +
Preference number: 4 (lower is better)
Translates to: CPEKSSGLQWCRLPFVSLLRLRS*NAQIWA
Trigger: TGCCCAAATCTGGGCGTTCCAGCTCCTTAGACGGAG...AAGAGAAACAAAAGGAAGCCTGCACCATTGTAGCCCTGAACTCTTTTCTGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CCA 90 bp CATCCAGAAGATTGCATTTTCTCTTCAGAGTACAATTTTCCATCTGTCAGAGCAAAGAGGGTCAGGCGCTaGGAGGGCGACTGCAAGCGG +
Preference number: 4 (lower is better)
Translates to: HPEDCIFSSEYNFPSVRAKRVRR*EGDCKR
Trigger: CCGCTTGCAGTCGCCCTCCCAGCGCCTGACCCTCTT...TGCTCTGACAGATGGAAAATTGTACTCTGAAGAGAAAATGCAATCTTCTGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR TCA 90 bp ACCACACCCACCCCTGCCTTCCAACTATTAATGCTGGCAGGACTTAGCCAGACCTTCAAACCTAAACTGTaGTTCTTAGGAGATGCTTCC +
Preference number: 4 (lower is better)
Translates to: TTPTPAFQLLMLAGLSQTFKPKL*FLGDAS
Trigger: GGAAGCATCTCCTAAGAATCACAGTTTAGGTTTGAA...GGTCTGGCTAAGTCCTGCCAGCATTAATAGTTGGAAGGCAGGGGTGGGTGTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR TCA 90 bp CATCCAGAAGATTGCATTTTCTCTTCAGAGTACAATTTTCCATCTGTCAGAGCAGCGGAGGGCCGGAAGTaGGCCGCAGCTTTTCCTTTC +
Preference number: 4 (lower is better)
Translates to: HPEDCIFSSEYNFPSVRAAEGRK*AAAFPF
Trigger: GAAAGGAAAAGCTGCGGCTCACTTCCGGCCCTCCGC...TGCTCTGACAGATGGAAAATTGTACTCTGAAGAGAAAATGCAATCTTCTGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR GCA 90 bp TGCCCAGAAAAGAGTTCAGGGCTACAATGGTGCAGGCTTCCTTTTGTTTCTCTTAGTGTTGCAAGACTCTaGCCAGTCTTGGGATCCCAG +
Preference number: 4 (lower is better)
Translates to: CPEKSSGLQWCRLPFVSLSVARL*PVLGSQ
Trigger: CTGGGATCCCAAGACTGGGCAGAGTCTTGCAACACT...AAGAGAAACAAAAGGAAGCCTGCACCATTGTAGCCCTGAACTCTTTTCTGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR GCA 90 bp CTGTATCTGGTGGAAACCATGGATTTCTACAAGCTCGAATTATTCCTCATTGTACTCTACCCCAGTTACTaGCACTCCGGCCCCCTCGAG +
Preference number: 4 (lower is better)
Translates to: LYLVETMDFYKLELFLIVLYPSY*HSGPLE
Trigger: CTCGAGGGGGCCGGAGTGGCAGTAACTGGGGTAGAG...TACAATGAGGAATAATTCGAGCTTGTAGAAATCCATGGTTTCCACCAGATACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR GCA 90 bp GCCAGAAGGTATGAGCCTAACATTCTGATGAGTCCAGAAAACTACGTTTTGTCAGCCGCAGTAGAGCACTaGTGCTTCCTCCAACCCCAA +
Preference number: 4 (lower is better)
Translates to: ARRYEPNILMSPENYVLSAAVEH*CFLQPQ
Trigger: TTGGGGTTGGAGGAAGCAGCAGTGCTCTACTGCGGC...TGACAAAACGTAGTTTTCTGGACTCATCAGAATGTTAGGCTCATACCTTCTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR GCA 90 bp TGCCCAGAAAAGAGTTCAGGGCTACAATGGTGCAGGCTTCCTTTTGTTTCTCTTGAAGGGGCGCGTAGATaGTTAACGGTCTCTTCGGAA +
Preference number: 4 (lower is better)
Translates to: CPEKSSGLQWCRLPFVSLEGARR*LTVSSE
Trigger: TTCCGAAGAGACCGTTAAGCATCTACGCGCCCCTTC...AAGAGAAACAAAAGGAAGCCTGCACCATTGTAGCCCTGAACTCTTTTCTGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR GCA 90 bp TATGAGTACCCATGGCCCATAGCCAGATACTCCAGTTGGACAGAGGATTTAAGATCTGGAAAGGGGGTATaGCTAGGCAGGGCAGTGTTT +
Preference number: 4 (lower is better)
Translates to: YEYPWPIARYSSWTEDLRSGKGV*LGRAVF
Trigger: AAACACTGCCCTGCCTAGGCATACCCCCTTTCCAGA...TCTTAAATCCTCTGTCCAACTGGAGTATCTGGCTATGGGCCATGGGTACTCATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393006.5
CDS-3UTR CCA 90 bp TCTAAGCAACCATTGAAACTTCCAGCACCAGCGGCCAGGTACTGTGGCTCAGATCAAGCGTCTTCCTTCTaGAGTCCACCTAACAACAAA +
Preference number: 4 (lower is better)
Translates to: SKQPLKLPAPAARYCGSDQASSF*SPPNNK
Trigger: TTTGTTGTTAGGTGGACTCCAGAAGGAAGACGCTTG...ATCTGAGCCACAGTACCTGGCCGCTGGTGCTGGAAGTTTCAATGGTTGCTTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CCA 90 bp TCTAAGCAACCATTGAAACTTCCAGCACCAGCGGCCAGGTACTGTGGCTCAGATAGGAATCTGAGACATTaGACCTTGTCCTGGAAAAGG +
Preference number: 4 (lower is better)
Translates to: SKQPLKLPAPAARYCGSDRNLRH*TLSWKR
Trigger: CCTTTTCCAGGACAAGGTCCAATGTCTCAGATTCCT...ATCTGAGCCACAGTACCTGGCCGCTGGTGCTGGAAGTTTCAATGGTTGCTTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CCA 90 bp GCCAGAAGGTATGAGCCTAACATTCTGATGAGTCCAGAAAACTACGTTTTGTCACCTTGCATGCCACCCTaGGGTGGAGGTCCTAAAGAG +
Preference number: 4 (lower is better)
Translates to: ARRYEPNILMSPENYVLSPCMPP*GGGPKE
Trigger: CTCTTTAGGACCTCCACCCCAGGGTGGCATGCAAGG...TGACAAAACGTAGTTTTCTGGACTCATCAGAATGTTAGGCTCATACCTTCTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CCA 90 bp TGCAGGCTTCCTTTTGTTTCTCTTGGTGAGTCCACAAGAAGTTCTTACATACTGATGTGGCCCTCTTGCTaGGTTCTGCTGTCCCTGAGG +
Preference number: 4 (lower is better)
Translates to: CRLPFVSLGESTRSSYILMWPSC*VLLSLR
Trigger: CCTCAGGGACAGCAGAACCCAGCAAGAGGGCCACAT...CAGTATGTAAGAACTTCTTGTGGACTCACCAAGAGAAACAAAAGGAAGCCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CCA 90 bp AAGAAACAAGAGAGATTCTGTGTACCCTTTACCCATTCCTCCATGTTGCAAAACGTCATCGGGGAAGTCTaGGTGAGGGCCACGCCTATC +
Preference number: 4 (lower is better)
Translates to: KKQERFCVPFTHSSMLQNVIGEV*VRATPI
Trigger: GATAGGCGTGGCCCTCACCCAGACTTCCCCGATGAC...GTTTTGCAACATGGAGGAATGGGTAAAGGGTACACAGAATCTCTCTTGTTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR TCA 90 bp AAGAAACAAGAGAGATTCTGTGTACCCTTTACCCATTCCTCCATGTTGCAAAACTCGCTGAATTCCCTGTaGTCAGGGGGAAACGGAGGC +
Preference number: 4 (lower is better)
Translates to: KKQERFCVPFTHSSMLQNSLNSL*SGGNGG
Trigger: GCCTCCGTTTCCCCCTGATCACAGGGAATTCAGCGA...GTTTTGCAACATGGAGGAATGGGTAAAGGGTACACAGAATCTCTCTTGTTTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR GCA 90 bp GCCAGAAGGTATGAGCCTAACATTCTGATGAGTCCAGAAAACTACGTTTTGTCATGTCGAGGTGCCTGGTaGTGGAACCTTGGCATATGG +
Preference number: 4 (lower is better)
Translates to: ARRYEPNILMSPENYVLSCRGAW*WNLGIW
Trigger: CCATATGCCAAGGTTCCAGCACCAGGCACCTCGACA...TGACAAAACGTAGTTTTCTGGACTCATCAGAATGTTAGGCTCATACCTTCTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR GCA 90 bp CAGAAGAAAAGTCCTAGAGTCTTCTTGACAATGATCTGCTTACAGCTGCAAAGCTGTCGAGGTGCCTGGTaGTGGAACCTTGGCATATGG +
Preference number: 4 (lower is better)
Translates to: QKKSPRVFLTMICLQLQSCRGAW*WNLGIW
Trigger: CCATATGCCAAGGTTCCAGCACCAGGCACCTCGACA...GCTTTGCAGCTGTAAGCAGATCATTGTCAAGAAGACTCTAGGACTTTTCTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409658.7
CDS-3UTR GCA 90 bp CATCCAGAAGATTGCATTTTCTCTTCAGAGTACAATTTTCCATCTGTCAGAGCAGGTCCAGGATGCCTCTaGATTCCTTGGGGCCCATGC +
Preference number: 4 (lower is better)
Translates to: HPEDCIFSSEYNFPSVRAGPGCL*IPWGPC
Trigger: GCATGGGCCCCAAGGAATGCAGAGGCATCCTGGACC...TGCTCTGACAGATGGAAAATTGTACTCTGAAGAGAAAATGCAATCTTCTGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR GCA 90 bp ACCACACCCACCCCTGCCTTCCAACTATTAATGCTGGCAGGACTTAGCCAGACCACGGTTATTAGAAGTTaGTTTCGAAGTAACTGTGGT +
Preference number: 4 (lower is better)
Translates to: TTPTPAFQLLMLAGLSQTTVIRS*FRSNCG
Trigger: ACCACAGTTACTTCGAAAGCAACTTCTAATAACCGT...GGTCTGGCTAAGTCCTGCCAGCATTAATAGTTGGAAGGCAGGGGTGGGTGTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CCA 90 bp GGCTATCTAAATCAAACCACAGTGTCAATATGTTGGGAACAAGTACCCTGGCTAAGCTGTCGAGGTGCCTaGTGCTGGAACCTTGGCATA +
Preference number: 4 (lower is better)
Translates to: GYLNQTTVSICWEQVPWLSCRGA*CWNLGI
Trigger: TATGCCAAGGTTCCAGCACCAGGCACCTCGACAGCT...TAGCCAGGGTACTTGTTCCCAACATATTGACACTGTGGTTTGATTTAGATAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409658.7
CDS-3UTR CCA 90 bp TGCAGGCTTCCTTTTGTTTCTCTTGGTGAGTCCACAAGAAGTTCTTACATACTGTATGTGACCACGTCATaGCCCTCACTGGGCTGTCGT +
Preference number: 4 (lower is better)
Translates to: CRLPFVSLGESTRSSYILYVTTS*PSLGCR
Trigger: ACGACAGCCCAGTGAGGGCCATGACGTGGTCACATA...CAGTATGTAAGAACTTCTTGTGGACTCACCAAGAGAAACAAAAGGAAGCCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CCA 90 bp GTGTGTGTACATATGTGTGTGTGTATGTTCGGGCACATGTTATTCAACAGTCACTATGTGACCACGTCATaGCCCTCACTGGGCTGTCGT +
Preference number: 4 (lower is better)
Translates to: VCVHMCVCMFGHMLFNSHYVTTS*PSLGCR
Trigger: ACGACAGCCCAGTGAGGGCCATGACGTGGTCACATA...GTGACTGTTGAATAACATGTGCCCGAACATACACACACACATATGTACACACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393006.5
CDS-3UTR CCA 90 bp CATCCAGAAGATTGCATTTTCTCTTCAGAGTACAATTTTCCATCTGTCAGAGCAACCCTGTGGGCCAGGTaGACCCTGAGGACCCATATG +
Preference number: 4 (lower is better)
Translates to: HPEDCIFSSEYNFPSVRATLWAR*TLRTHM
Trigger: CATATGGGTCCTCAGGGTCCACCTGGCCCACAGGGT...TGCTCTGACAGATGGAAAATTGTACTCTGAAGAGAAAATGCAATCTTCTGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CCA 90 bp TCTAAAGGGCATGTGACTTTATTTCTGACTAACATCAAGTTCCTCTCCTCATCAGCCCTTGCATTCCTCTaGGACCAGGTGGTCCCTGCA +
Preference number: 4 (lower is better)
Translates to: SKGHVTLFLTNIKFLSSSALAFL*DQVVPA
Trigger: TGCAGGGACCACCTGGTCCCAGAGGAATGCAAGGGC...TGATGAGGAGAGGAACTTGATGTTAGTCAGAAATAAAGTCACATGCCCTTTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CCA 90 bp CTGTATCTGGTGGAAACCATGGATTTCTACAAGCTCGAATTATTCCTCATTGTACCCAGCATTGATCCTTaGGGTGGAGGCCCCTGCATG +
Preference number: 4 (lower is better)
Translates to: LYLVETMDFYKLELFLIVPSIDP*GGGPCM
Trigger: CATGCAGGGGCCTCCACCCCAAGGATCAATGCTGGG...TACAATGAGGAATAATTCGAGCTTGTAGAAATCCATGGTTTCCACCAGATACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CCA 90 bp TGCCCAGAAAAGAGTTCAGGGCTACAATGGTGCAGGCTTCCTTTTGTTTCTCTTCTCATTGAGGGTTCCTaGGATTCAGGTGCCCAGAAA +
Preference number: 4 (lower is better)
Translates to: CPEKSSGLQWCRLPFVSLLIEGS*DSGAQK
Trigger: TTTCTGGGCACCTGAATCCCAGGAACCCTCAATGAG...AAGAGAAACAAAAGGAAGCCTGCACCATTGTAGCCCTGAACTCTTTTCTGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR TCA 90 bp AAGAAACAAGAGAGATTCTGTGTACCCTTTACCCATTCCTCCATGTTGCAAAACCCTGGAGGCCCCATTTaGGCCATGTTCATTGGCATC +
Preference number: 4 (lower is better)
Translates to: KKQERFCVPFTHSSMLQNPGGPI*AMFIGI
Trigger: GATGCCAATGAACATGGCTCAAATGGGGCCTCCAGG...GTTTTGCAACATGGAGGAATGGGTAAAGGGTACACAGAATCTCTCTTGTTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR TCA 90 bp TCTAAAGGGCATGTGACTTTATTTCTGACTAACATCAAGTTCCTCTCCTCATCAGGTCCTCTCATCTCTTaGGGCGGGTGGCCCATAATC +
Preference number: 4 (lower is better)
Translates to: SKGHVTLFLTNIKFLSSSGPLIS*GGWPII
Trigger: GATTATGGGCCACCCGCCTCAAGAGATGAGAGGACC...TGATGAGGAGAGGAACTTGATGTTAGTCAGAAATAAAGTCACATGCCCTTTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR TCA 90 bp TCTAAGCAACCATTGAAACTTCCAGCACCAGCGGCCAGGTACTGTGGCTCAGATTTCACTCTCAAAATGTaGTCTGTCAAGTCCAGTAGA +
Preference number: 4 (lower is better)
Translates to: SKQPLKLPAPAARYCGSDFTLKM*SVKSSR
Trigger: TCTACTGGACTTGACAGATCACATTTTGAGAGTGAA...ATCTGAGCCACAGTACCTGGCCGCTGGTGCTGGAAGTTTCAATGGTTGCTTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR TCA 90 bp TATGAGTACCCATGGCCCATAGCCAGATACTCCAGTTGGACAGAGGATTTAAGAGTTTCTTTCCCAGTCTaGGAGCCTTCAGTCCTTTCA +
Preference number: 4 (lower is better)
Translates to: YEYPWPIARYSSWTEDLRVSFPV*EPSVLS
Trigger: TGAAAGGACTGAAGGCTCTCAGACTGGGAAAGAAAC...TCTTAAATCCTCTGTCCAACTGGAGTATCTGGCTATGGGCCATGGGTACTCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393006.5
CDS-3UTR GCA 90 bp AAGAAACAAGAGAGATTCTGTGTACCCTTTACCCATTCCTCCATGTTGCAAAACAAACAGCTGTCGAGGTaGCTGGTGCTGGAACCTTGG +
Preference number: 4 (lower is better)
Translates to: KKQERFCVPFTHSSMLQNKQLSR*LVLEPW
Trigger: CCAAGGTTCCAGCACCAGGCACCTCGACAGCTGTTT...GTTTTGCAACATGGAGGAATGGGTAAAGGGTACACAGAATCTCTCTTGTTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR GCA 90 bp TCTAAGCAACCATTGAAACTTCCAGCACCAGCGGCCAGGTACTGTGGCTCAGATATTGGAACTTTATTTTaGATCCAAGCCTGCTGGAAC +
Preference number: 4 (lower is better)
Translates to: SKQPLKLPAPAARYCGSDIGTLF*IQACWN
Trigger: GTTCCAGCAGGCTTGGATGCAAAATAAAGTTCCAAT...ATCTGAGCCACAGTACCTGGCCGCTGGTGCTGGAAGTTTCAATGGTTGCTTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR GCA 90 bp CTGTATCTGGTGGAAACCATGGATTTCTACAAGCTCGAATTATTCCTCATTGTATGGATGTGGCCCTCTTaGTGGGTTCTGCTGTCCCTG +
Preference number: 4 (lower is better)
Translates to: LYLVETMDFYKLELFLIVWMWPS*WVLLSL
Trigger: CAGGGACAGCAGAACCCAGCAAGAGGGCCACATCCA...TACAATGAGGAATAATTCGAGCTTGTAGAAATCCATGGTTTCCACCAGATACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR GCA 90 bp AAGAAACAAGAGAGATTCTGTGTACCCTTTACCCATTCCTCCATGTTGCAAAACAAGAGGAGCGTTCTCTaGTGGCTGGGGAATGACCGT +
Preference number: 4 (lower is better)
Translates to: KKQERFCVPFTHSSMLQNKRSVL*WLGNDR
Trigger: ACGGTCATTCCCCAGCCAGCAGAGAACGCTCCTCTT...GTTTTGCAACATGGAGGAATGGGTAAAGGGTACACAGAATCTCTCTTGTTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR GCA 90 bp TGCCCAGAAAAGAGTTCAGGGCTACAATGGTGCAGGCTTCCTTTTGTTTCTCTTAACCACACCCACCCCTaGCTTCCAACTATTAATGCT +
Preference number: 4 (lower is better)
Translates to: CPEKSSGLQWCRLPFVSLNHTHP*LPTINA
Trigger: AGCATTAATAGTTGGAAGGCAGGGGTGGGTGTGGTT...AAGAGAAACAAAAGGAAGCCTGCACCATTGTAGCCCTGAACTCTTTTCTGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CCA 90 bp GTTTTGCTGAAACTTACATATCAGGCTGCTGTTAAACTCTTTTACAATAACGTGCGCCATCTTCCCCTATaGGCCACCGAACGCACGCTC +
Preference number: 4 (lower is better)
Translates to: VLLKLTYQAAVKLFYNNVRHLPL*ATERTL
Trigger: GAGCGTGCGTTCGGTGGCCCATAGGGGAAGATGGCG...CACGTTATTGTAAAAGAGTTTAACAGCAGCCTGATATGTAAGTTTCAGCAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393006.5
CDS-3UTR CCA 90 bp CAGAAAGCAGCAGCAAAGTCCGCTGTAAGAAAGAGTACTCTGAGGTGTGTGTGTCAAGCGTCTTCCTTCTaGAGTCCACCTAACAACAAA +
Preference number: 4 (lower is better)
Translates to: QKAAAKSAVRKSTLRCVCQASSF*SPPNNK
Trigger: TTTGTTGTTAGGTGGACTCCAGAAGGAAGACGCTTG...ACACACACACCTCAGAGTACTCTTTCTTACAGCGGACTTTGCTGCTGCTTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393006.5
CDS-3UTR CCA 90 bp AAGAAACAAGAGAGATTCTGTGTACCCTTTACCCATTCCTCCATGTTGCAAAACACCTCCCTGATGCAGTaGAGGACCTTGTGGTCCCAT +
Preference number: 4 (lower is better)
Translates to: KKQERFCVPFTHSSMLQNTSLMQ*RTLWSH
Trigger: ATGGGACCACAAGGTCCTCCACTGCATCAGGGAGGT...GTTTTGCAACATGGAGGAATGGGTAAAGGGTACACAGAATCTCTCTTGTTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CCA 90 bp CTGTATCTGGTGGAAACCATGGATTTCTACAAGCTCGAATTATTCCTCATTGTAGATCCCTTGAGACCCTaGTCCGCCTTGGATCCCATG +
Preference number: 4 (lower is better)
Translates to: LYLVETMDFYKLELFLIVDPLRP*SALDPM
Trigger: CATGGGATCCAAGGCGGACCAGGGTCTCAAGGGATC...TACAATGAGGAATAATTCGAGCTTGTAGAAATCCATGGTTTCCACCAGATACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CCA 90 bp CTGTATCTGGTGGAAACCATGGATTTCTACAAGCTCGAATTATTCCTCATTGTAAGGAGCGTTCTCTGCTaGCTGGGGAATGACCGTCGT +
Preference number: 4 (lower is better)
Translates to: LYLVETMDFYKLELFLIVRSVLC*LGNDRR
Trigger: ACGACGGTCATTCCCCAGCCAGCAGAGAACGCTCCT...TACAATGAGGAATAATTCGAGCTTGTAGAAATCCATGGTTTCCACCAGATACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CCA 90 bp TGCAGGCTTCCTTTTGTTTCTCTTGGTGAGTCCACAAGAAGTTCTTACATACTGCTGTGGTATCCATCGTaGTGCTCTCCGTCTAAGGAG +
Preference number: 4 (lower is better)
Translates to: CRLPFVSLGESTRSSYILLWYPS*CSPSKE
Trigger: CTCCTTAGACGGAGAGCACCACGATGGATACCACAG...CAGTATGTAAGAACTTCTTGTGGACTCACCAAGAGAAACAAAAGGAAGCCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CCA 90 bp AAGATTGATGGGAGTCTGGCACTAAATACCAAGACTATTAGAAAGGCCAGTACCCAGTGCATAGAATCATaGGTGAAGGGGTCCGGCAGT +
Preference number: 4 (lower is better)
Translates to: KIDGSLALNTKTIRKASTQCIES*VKGSGS
Trigger: ACTGCCGGACCCCTTCACCCATGATTCTATGCACTG...GGTACTGGCCTTTCTAATAGTCTTGGTATTTAGTGCCAGACTCCCATCAATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393006.5
CDS-3UTR TCA 90 bp CAGGGCAGTGTTTTCACAATGTATGTTCCAACAATACAGTGCATAGAATCATGGCCACATGTCATTATGTaGCCACGTCATGGCCCTCAC +
Preference number: 4 (lower is better)
Translates to: QGSVFTMYVPTIQCIESWPHVIM*PRHGPH
Trigger: GTGAGGGCCATGACGTGGTCACATAATGACATGTGG...CCATGATTCTATGCACTGTATTGTTGGAACATACATTGTGAAAACACTGCCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393006.5
CDS-3UTR TCA 90 bp TGCAGGCTTCCTTTTGTTTCTCTTGGTGAGTCCACAAGAAGTTCTTACATACTGAATGGTATTGGCCCTTaGGATGGATGTGGCCCTCTT +
Preference number: 4 (lower is better)
Translates to: CRLPFVSLGESTRSSYILNGIGP*DGCGPL
Trigger: AAGAGGGCCACATCCATCTCAAGGGCCAATACCATT...CAGTATGTAAGAACTTCTTGTGGACTCACCAAGAGAAACAAAAGGAAGCCTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR TCA 90 bp AAGATTGATGGGAGTCTGGCACTAAATACCAAGACTATTAGAAAGGCCAGTACCCATCAGCCATTTGTCTaGGACGGGAGATACCAGTGT +
Preference number: 4 (lower is better)
Translates to: KIDGSLALNTKTIRKASTHQPFV*DGRYQC
Trigger: ACACTGGTATCTCCCGTCTCAGACAAATGGCTGATG...GGTACTGGCCTTTCTAATAGTCTTGGTATTTAGTGCCAGACTCCCATCAATCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393006.5
CDS-3UTR TCA 90 bp TATGAGTACCCATGGCCCATAGCCAGATACTCCAGTTGGACAGAGGATTTAAGAGGATTTGATCAGAACTaGGTGGTAGCACAGAAGTGT +
Preference number: 4 (lower is better)
Translates to: YEYPWPIARYSSWTEDLRGFDQN*VVAQKC
Trigger: ACACTTCTGTGCTACCACTCAGTTCTGATCAAATCC...TCTTAAATCCTCTGTCCAACTGGAGTATCTGGCTATGGGCCATGGGTACTCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393006.5
CDS-3UTR GCA 90 bp TGCAGGCTTCCTTTTGTTTCTCTTGGTGAGTCCACAAGAAGTTCTTACATACTGGTGATTCTTAGGAGATaGTTCCAAGGGGAAGCTCCC +
Preference number: 4 (lower is better)
Translates to: CRLPFVSLGESTRSSYILVILRR*FQGEAP
Trigger: GGGAGCTTCCCCTTGGAAGCATCTCCTAAGAATCAC...CAGTATGTAAGAACTTCTTGTGGACTCACCAAGAGAAACAAAAGGAAGCCTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR GCA 90 bp GCCAGAAGGTATGAGCCTAACATTCTGATGAGTCCAGAAAACTACGTTTTGTCAGCAGCTTTTCCTTTCTaGCACCGCCTTGTCCAAGAT +
Preference number: 4 (lower is better)
Translates to: ARRYEPNILMSPENYVLSAAFPF*HRLVQD
Trigger: ATCTTGGACAAGGCGGTGGCAGAAAGGAAAAGCTGC...TGACAAAACGTAGTTTTCTGGACTCATCAGAATGTTAGGCTCATACCTTCTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CCA 90 bp TCTAAAGGGCATGTGACTTTATTTCTGACTAACATCAAGTTCCTCTCCTCATCAAGCTGTCGAGGTGCCTaGTGCTGGAACCTTGGCATA +
Preference number: 4 (lower is better)
Translates to: SKGHVTLFLTNIKFLSSSSCRGA*CWNLGI
Trigger: TATGCCAAGGTTCCAGCACCAGGCACCTCGACAGCT...TGATGAGGAGAGGAACTTGATGTTAGTCAGAAATAAAGTCACATGCCCTTTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CCA 90 bp TCTAAGCAACCATTGAAACTTCCAGCACCAGCGGCCAGGTACTGTGGCTCAGATCAACATTCCTATAGGTaGGACCAGATCATTGTAATA +
Preference number: 4 (lower is better)
Translates to: SKQPLKLPAPAARYCGSDQHSYR*DQIIVI
Trigger: TATTACAATGATCTGGTCCCACCTATAGGAATGTTG...ATCTGAGCCACAGTACCTGGCCGCTGGTGCTGGAAGTTTCAATGGTTGCTTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CCA 90 bp CAACCAGGTCTTCACTTAAGCCTTTTTCCACTTTGTGTGAATTCTGAAGTTGTTTATGTGACCACGTCATaGCCCTCACTGGGCTGTCGT +
Preference number: 4 (lower is better)
Translates to: QPGLHLSLFPLCVNSEVVYVTTS*PSLGCR
Trigger: ACGACAGCCCAGTGAGGGCCATGACGTGGTCACATA...AACAACTTCAGAATTCACACAAAGTGGAAAAAGGCTTAAGTGAAGACCTGGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409658.7
CDS-3UTR CCA 90 bp AATTTGGTCACGAGTCTTCTTTTCTCAAGAGTACTTCCAAGTCTGCCAGAAGGCTTCACATATCCTCCGTaGTCTGCTGTCAACATCCAC +
Preference number: 4 (lower is better)
Translates to: NLVTSLLFSRVLPSLPEGFTYPP*SAVNIH
Trigger: GTGGATGTTGACAGCAGACCACGGAGGATATGTGAA...GCCTTCTGGCAGACTTGGAAGTACTCTTGAGAAAAGAAGACTCGTGACCAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393006.5
CDS-3UTR CCA 90 bp TCTAAAGGGCATGTGACTTTATTTCTGACTAACATCAAGTTCCTCTCCTCATCACCTAAACTGTCCCTGTaGACCTGGAGGCCCCATTTG +
Preference number: 4 (lower is better)
Translates to: SKGHVTLFLTNIKFLSSSPKLSL*TWRPHL
Trigger: CAAATGGGGCCTCCAGGTCCACAGGGACAGTTTAGG...TGATGAGGAGAGGAACTTGATGTTAGTCAGAAATAAAGTCACATGCCCTTTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CCA 90 bp TCTAAAGGGCATGTGACTTTATTTCTGACTAACATCAAGTTCCTCTCCTCATCAAGCGGCCAGGTACTGTaGCTCAGATCTGCAATCCCA +
Preference number: 4 (lower is better)
Translates to: SKGHVTLFLTNIKFLSSSSGQVL*LRSAIP
Trigger: TGGGATTGCAGATCTGAGCCACAGTACCTGGCCGCT...TGATGAGGAGAGGAACTTGATGTTAGTCAGAAATAAAGTCACATGCCCTTTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CCA 90 bp GGCTATCTAAATCAAACCACAGTGTCAATATGTTGGGAACAAGTACCCTGGCTACCTCCCACACATGGGTaGCACAACCTTAAAGAATGC +
Preference number: 4 (lower is better)
Translates to: GYLNQTTVSICWEQVPWLPPTHG*HNLKEC
Trigger: GCATTCTTTAAGGTTGTGCCACCCATGTGTGGGAGG...TAGCCAGGGTACTTGTTCCCAACATATTGACACTGTGGTTTGATTTAGATAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409658.7
3UTR CAA 72 bp CAGGGCTACAATGGTGCAGGCTTCCTTTTGTTTCTCTaGGTGAGTCCACAAGAAGTTCTTACATACTGTCCA +
Preference number: 4 (lower is better)
Translates to: QGYNGAGFLLFL*VSPQEVLTYCP
Trigger: TGGACAGTATGTAAGAACTTCTTGTGGACTCACCAAGAGAAACAAAAGGAAGCCTGCACCATTGTAGCCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR CAA 72 bp ATTCTTAGGAGATGCTTCCAAGGGGAAGCTCCCTCGTaGGACATCCAGAAGATTGCATTTTCTCTTCAGAGT +
Preference number: 4 (lower is better)
Translates to: ILRRCFQGEAPS*DIQKIAFSLQS
Trigger: ACTCTGAAGAGAAAATGCAATCTTCTGGATGTCCAACGAGGGAGCTTCCCCTTGGAAGCATCTCCTAAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR CAA 72 bp GTTAAACTATATCAGTATGCCTTTTCTAAGCAACCATaGAAACTTCCAGCACCAGCGGCCAGGTACTGTGGC +
Preference number: 4 (lower is better)
Translates to: VKLYQYAFSKQP*KLPAPAARYCG
Trigger: GCCACAGTACCTGGCCGCTGGTGCTGGAAGTTTCAATGGTTGCTTAGAAAAGGCATACTGATATAGTTTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR TCA 90 bp GCCAGAAGGTATGAGCCTAACATTCTGATGAGTCCAGAAAACTACGTTTTGTCACTCACTGGGCTGTCGTaGGCCTGTAATATTGTTTCA +
Preference number: 4 (lower is better)
Translates to: ARRYEPNILMSPENYVLSLTGLS*ACNIVS
Trigger: TGAAACAATATTACAGGCTCACGACAGCCCAGTGAG...TGACAAAACGTAGTTTTCTGGACTCATCAGAATGTTAGGCTCATACCTTCTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR TCA 90 bp TGCAGGCTTCCTTTTGTTTCTCTTGGTGAGTCCACAAGAAGTTCTTACATACTGGTGCCTGGAACATCTTaGCGTTGTTCATGTTCGACT +
Preference number: 4 (lower is better)
Translates to: CRLPFVSLGESTRSSYILVPGTS*RCSCST
Trigger: AGTCGAACATGAACAACGTCAAGATGTTCCAGGCAC...CAGTATGTAAGAACTTCTTGTGGACTCACCAAGAGAAACAAAAGGAAGCCTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR TCA 90 bp AGTGTCAATATGTTGGGAACAAGTACCCTGGCTACAAGGAAGGAAAAGGAATACGTGCCTGGAACATCTTaGCGTTGTTCATGTTCGACT +
Preference number: 4 (lower is better)
Translates to: SVNMLGTSTLATRKEKEYVPGTS*RCSCST
Trigger: AGTCGAACATGAACAACGTCAAGATGTTCCAGGCAC...GTATTCCTTTTCCTTCCTTGTAGCCAGGGTACTTGTTCCCAACATATTGACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409658.7
CDS-3UTR TCA 90 bp GCCAGAAGGTATGAGCCTAACATTCTGATGAGTCCAGAAAACTACGTTTTGTCATTTCTAAGCAACCATTaGAACTTCCAGCACCAGCGG +
Preference number: 4 (lower is better)
Translates to: ARRYEPNILMSPENYVLSFLSNH*NFQHQR
Trigger: CCGCTGGTGCTGGAAGTTTCAATGGTTGCTTAGAAA...TGACAAAACGTAGTTTTCTGGACTCATCAGAATGTTAGGCTCATACCTTCTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR TCA 90 bp TCTAAAGGGCATGTGACTTTATTTCTGACTAACATCAAGTTCCTCTCCTCATCAAGGTTGAGGCTGCAGTaGACTGTGATCACACCACTG +
Preference number: 4 (lower is better)
Translates to: SKGHVTLFLTNIKFLSSSRLRLQ*TVITPL
Trigger: CAGTGGTGTGATCACAGTTCACTGCAGCCTCAACCT...TGATGAGGAGAGGAACTTGATGTTAGTCAGAAATAAAGTCACATGCCCTTTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR TCA 90 bp CAGAAAGCAGCAGCAAAGTCCGCTGTAAGAAAGAGTACTCTGAGGTGTGTGTGTCAAGGTAGAGGTGAATaGACAAGTTCACTTTCAGTT +
Preference number: 4 (lower is better)
Translates to: QKAAAKSAVRKSTLRCVCQGRGE*TSSLSV
Trigger: AACTGAAAGTGAACTTGTTCATTCACCTCTACCTTG...ACACACACACCTCAGAGTACTCTTTCTTACAGCGGACTTTGCTGCTGCTTTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393006.5
CDS-3UTR GCA 90 bp GGCTATCTAAATCAAACCACAGTGTCAATATGTTGGGAACAAGTACCCTGGCTAATATCCTCCGTGGTCTaGTGTCAACATCCACATGTC +
Preference number: 4 (lower is better)
Translates to: GYLNQTTVSICWEQVPWLISSVV*CQHPHV
Trigger: GACATGTGGATGTTGACAGCAGACCACGGAGGATAT...TAGCCAGGGTACTTGTTCCCAACATATTGACACTGTGGTTTGATTTAGATAGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409658.7
CDS-3UTR GCA 90 bp CATCCAGAAGATTGCATTTTCTCTTCAGAGTACAATTTTCCATCTGTCAGAGCAGCTGGATCCCAGTGTTaGCTTAACAGGGTGTCTGTC +
Preference number: 4 (lower is better)
Translates to: HPEDCIFSSEYNFPSVRAAGSQC*LNRVSV
Trigger: GACAGACACCCTGTTAAGGCAACACTGGGATCCAGC...TGCTCTGACAGATGGAAAATTGTACTCTGAAGAGAAAATGCAATCTTCTGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR GCA 90 bp GCCAGAAGGTATGAGCCTAACATTCTGATGAGTCCAGAAAACTACGTTTTGTCACACACCTCAGATCAATaGAGTCAGAACCTGGGAAGT +
Preference number: 4 (lower is better)
Translates to: ARRYEPNILMSPENYVLSHTSDQ*SQNLGS
Trigger: ACTTCCCAGGTTCTGACTGCATTGATCTGAGGTGTG...TGACAAAACGTAGTTTTCTGGACTCATCAGAATGTTAGGCTCATACCTTCTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR GCA 90 bp AGAATCTGCTGCAAGAAGGAGTCAGTTTTTCCCAGCAGTGAAAGATCATCAAGTGAGCCCATGCATCTCTaGACCCAGAATACACTTAGA +
Preference number: 4 (lower is better)
Translates to: RICCKKESVFPSSERSSSEPMHL*TQNTLR
Trigger: TCTAAGTGTATTCTGGGTGCAGAGATGCATGGGCTC...ACTTGATGATCTTTCACTGCTGGGAAAAACTGACTCCTTCTTGCAGCAGATTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409658.7
CDS-3UTR CCA 90 bp CATCCAGAAGATTGCATTTTCTCTTCAGAGTACAATTTTCCATCTGTCAGAGCAAATTCACGTAACCGGTaGCCAAAGCGCTTGTCAGGG +
Preference number: 4 (lower is better)
Translates to: HPEDCIFSSEYNFPSVRANSRNR*PKRLSG
Trigger: CCCTGACAAGCGCTTTGGCCACCGGTTACGTGAATT...TGCTCTGACAGATGGAAAATTGTACTCTGAAGAGAAAATGCAATCTTCTGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CCA 90 bp GGCTATCTAAATCAAACCACAGTGTCAATATGTTGGGAACAAGTACCCTGGCTATTCCTTTGGAAGTCGTaGCATAACCAAGCCAACCAG +
Preference number: 4 (lower is better)
Translates to: GYLNQTTVSICWEQVPWLFLWKS*HNQANQ
Trigger: CTGGTTGGCTTGGTTATGCCACGACTTCCAAAGGAA...TAGCCAGGGTACTTGTTCCCAACATATTGACACTGTGGTTTGATTTAGATAGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409658.7
CDS-3UTR TCA 90 bp CAGGGCAGTGTTTTCACAATGTATGTTCCAACAATACAGTGCATAGAATCATGGCTCACTGGGCTGTCGTaGGCCTGTAATATTGTTTCA +
Preference number: 4 (lower is better)
Translates to: QGSVFTMYVPTIQCIESWLTGLS*ACNIVS
Trigger: TGAAACAATATTACAGGCTCACGACAGCCCAGTGAG...CCATGATTCTATGCACTGTATTGTTGGAACATACATTGTGAAAACACTGCCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393006.5
CDS-3UTR TCA 90 bp CATTACTCCGTTAATGTTTGCCACATCCAGTTATCTGTGAGGGTTTTAGTCCTACTCACTGGGCTGTCGTaGGCCTGTAATATTGTTTCA +
Preference number: 4 (lower is better)
Translates to: HYSVNVCHIQLSVRVLVLLTGLS*ACNIVS
Trigger: TGAAACAATATTACAGGCTCACGACAGCCCAGTGAG...TAGGACTAAAACCCTCACAGATAACTGGATGTGGCAAACATTAACGGAGTAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409658.7
CDS-3UTR TCA 90 bp AATTTGGTCACGAGTCTTCTTTTCTCAAGAGTACTTCCAAGTCTGCCAGAAGGCTTTATTATCCGTGGGTaGGAAACTGGCCTCTCTAAT +
Preference number: 4 (lower is better)
Translates to: NLVTSLLFSRVLPSLPEGFIIRG*ETGLSN
Trigger: ATTAGAGAGGCCAGTTTCTCACCCACGGATAATAAA...GCCTTCTGGCAGACTTGGAAGTACTCTTGAGAAAAGAAGACTCGTGACCAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393006.5
CDS-3UTR TCA 90 bp CAGGGCAGTGTTTTCACAATGTATGTTCCAACAATACAGTGCATAGAATCATGGAATAAAGAGAAGCCATaGCTGAAGCCCCTGGTAAGG +
Preference number: 4 (lower is better)
Translates to: QGSVFTMYVPTIQCIESWNKEKP*LKPLVR
Trigger: CCTTACCAGGGGCTTCAGTCATGGCTTCTCTTTATT...CCATGATTCTATGCACTGTATTGTTGGAACATACATTGTGAAAACACTGCCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393006.5
CDS-3UTR TCA 90 bp CAGGGCAGTGTTTTCACAATGTATGTTCCAACAATACAGTGCATAGAATCATGGAAGACAAAGGGTATATaGGTACCCATGGCCCATAGC +
Preference number: 4 (lower is better)
Translates to: QGSVFTMYVPTIQCIESWKTKGI*VPMAHS
Trigger: GCTATGGGCCATGGGTACTCATATACCCTTTGTCTT...CCATGATTCTATGCACTGTATTGTTGGAACATACATTGTGAAAACACTGCCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393006.5
CDS-3UTR TCA 90 bp CATTACTCCGTTAATGTTTGCCACATCCAGTTATCTGTGAGGGTTTTAGTCCTAAAGTTTCCCAGAAACTaGCAGAGCCCATGCATCTCT +
Preference number: 4 (lower is better)
Translates to: HYSVNVCHIQLSVRVLVLKFPRN*QSPCIS
Trigger: AGAGATGCATGGGCTCTGTCAGTTTCTGGGAAACTT...TAGGACTAAAACCCTCACAGATAACTGGATGTGGCAAACATTAACGGAGTAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409658.7
CDS-3UTR GCA 90 bp GTTTTGCTGAAACTTACATATCAGGCTGCTGTTAAACTCTTTTACAATAACGTGTGTCGAGGTGCCTGGTaGTGGAACCTTGGCATATGG +
Preference number: 4 (lower is better)
Translates to: VLLKLTYQAAVKLFYNNVCRGAW*WNLGIW
Trigger: CCATATGCCAAGGTTCCAGCACCAGGCACCTCGACA...CACGTTATTGTAAAAGAGTTTAACAGCAGCCTGATATGTAAGTTTCAGCAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393006.5
CDS-3UTR GCA 90 bp TATGAGTACCCATGGCCCATAGCCAGATACTCCAGTTGGACAGAGGATTTAAGAAGTAAGCTGTTGCATTaGTTGCTGTTGTGCAAAATC +
Preference number: 4 (lower is better)
Translates to: YEYPWPIARYSSWTEDLRSKLLH*LLLCKI
Trigger: GATTTTGCACAACAGCAAGCAATGCAACAGCTTACT...TCTTAAATCCTCTGTCCAACTGGAGTATCTGGCTATGGGCCATGGGTACTCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393006.5
CDS-3UTR GCA 90 bp AGAAAGGCCAGTACCTACACTACGTTAATAATAGATGTATTAGTGCCAGCAGACATATCCTCCGTGGTCTaGTGTCAACATCCACATGTC +
Preference number: 4 (lower is better)
Translates to: RKASTYTTLIIDVLVPADISSVV*CQHPHV
Trigger: GACATGTGGATGTTGACAGCAGACCACGGAGGATAT...GTCTGCTGGCACTAATACATCTATTATTAACGTAGTGTAGGTACTGGCCTTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393006.5
CDS-3UTR GCA 90 bp AAGATTGATGGGAGTCTGGCACTAAATACCAAGACTATTAGAAAGGCCAGTACCAATCGCCTCCTTATGTaGCTGGAACATCTTGACGTT +
Preference number: 4 (lower is better)
Translates to: KIDGSLALNTKTIRKASTNRLLM*LEHLDV
Trigger: AACGTCAAGATGTTCCAGGCACATAAGGAGGCGATT...GGTACTGGCCTTTCTAATAGTCTTGGTATTTAGTGCCAGACTCCCATCAATCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393006.5
CDS-3UTR GCA 90 bp GAACCCATTCATTACTCCGTTAATGTTTGCCACATCCAGTTATCTGTGAGGGTTAATCGCCTCCTTATGTaGCTGGAACATCTTGACGTT +
Preference number: 4 (lower is better)
Translates to: EPIHYSVNVCHIQLSVRVNRLLM*LEHLDV
Trigger: AACGTCAAGATGTTCCAGGCACATAAGGAGGCGATT...AACCCTCACAGATAACTGGATGTGGCAAACATTAACGGAGTAATGAATGGGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409658.7
CDS-3UTR GCA 90 bp GCCAGAAGGTATGAGCCTAACATTCTGATGAGTCCAGAAAACTACGTTTTGTCATCAGGGCTACAATGGTaGAGGCTTCCTTTTGTTTCT +
Preference number: 4 (lower is better)
Translates to: ARRYEPNILMSPENYVLSSGLQW*RLPFVS
Trigger: AGAAACAAAAGGAAGCCTGCACCATTGTAGCCCTGA...TGACAAAACGTAGTTTTCTGGACTCATCAGAATGTTAGGCTCATACCTTCTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR GCA 90 bp TCTAAAGGGCATGTGACTTTATTTCTGACTAACATCAAGTTCCTCTCCTCATCATTCCTGGGATTCAGGTaGCCAGAAAAGAGTTCAGGG +
Preference number: 4 (lower is better)
Translates to: SKGHVTLFLTNIKFLSSSFLGFR*PEKSSG
Trigger: CCCTGAACTCTTTTCTGGGCACCTGAATCCCAGGAA...TGATGAGGAGAGGAACTTGATGTTAGTCAGAAATAAAGTCACATGCCCTTTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR GCA 90 bp TGCCCAGAAAAGAGTTCAGGGCTACAATGGTGCAGGCTTCCTTTTGTTTCTCTTTTAAATTTGTGGAGATaGCCCATGTCTTGTGAGACT +
Preference number: 4 (lower is better)
Translates to: CPEKSSGLQWCRLPFVSLLNLWR*PMSCET
Trigger: AGTCTCACAAGACATGGGGCATCTCCACAAATTTAA...AAGAGAAACAAAAGGAAGCCTGCACCATTGTAGCCCTGAACTCTTTTCTGGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR GCA 90 bp TGCCCAGAAAAGAGTTCAGGGCTACAATGGTGCAGGCTTCCTTTTGTTTCTCTTGGACATCCAGAAGATTaGATTTTCTCTTCAGAGTAC +
Preference number: 4 (lower is better)
Translates to: CPEKSSGLQWCRLPFVSLGHPED*IFSSEY
Trigger: GTACTCTGAAGAGAAAATGCAATCTTCTGGATGTCC...AAGAGAAACAAAAGGAAGCCTGCACCATTGTAGCCCTGAACTCTTTTCTGGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR GCA 90 bp CTGTATCTGGTGGAAACCATGGATTTCTACAAGCTCGAATTATTCCTCATTGTAGCAGTAGAGCACTGCTaGTTCCTCCAACCCCAAAAT +
Preference number: 4 (lower is better)
Translates to: LYLVETMDFYKLELFLIVAVEHC*FLQPQN
Trigger: ATTTTGGGGTTGGAGGAAGCAGCAGTGCTCTACTGC...TACAATGAGGAATAATTCGAGCTTGTAGAAATCCATGGTTTCCACCAGATACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR GCA 90 bp GCCAGAAGGTATGAGCCTAACATTCTGATGAGTCCAGAAAACTACGTTTTGTCACCAAAAGAAATTTCCTaGCCCAAGAAGCATGGGATC +
Preference number: 4 (lower is better)
Translates to: ARRYEPNILMSPENYVLSPKEIS*PKKHGI
Trigger: GATCCCATGCTTCTTGGGGCAGGAAATTTCTTTTGG...TGACAAAACGTAGTTTTCTGGACTCATCAGAATGTTAGGCTCATACCTTCTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CCA 90 bp AGAAAGGCCAGTACCTACACTACGTTAATAATAGATGTATTAGTGCCAGCAGACGCCTCCTTATGTGCCTaGAACATCTTGACGTTGTTC +
Preference number: 4 (lower is better)
Translates to: RKASTYTTLIIDVLVPADASLCA*NILTLF
Trigger: GAACAACGTCAAGATGTTCCAGGCACATAAGGAGGC...GTCTGCTGGCACTAATACATCTATTATTAACGTAGTGTAGGTACTGGCCTTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393006.5
CDS-3UTR CCA 90 bp CATCCAGAAGATTGCATTTTCTCTTCAGAGTACAATTTTCCATCTGTCAGAGCATGGCATCTGCTGAGATaGATGGGGCTGTTGAAAACC +
Preference number: 4 (lower is better)
Translates to: HPEDCIFSSEYNFPSVRAWHLLR*MGLLKT
Trigger: GGTTTTCAACAGCCCCATCCATCTCAGCAGATGCCA...TGCTCTGACAGATGGAAAATTGTACTCTGAAGAGAAAATGCAATCTTCTGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CCA 90 bp GCCAGAAGGTATGAGCCTAACATTCTGATGAGTCCAGAAAACTACGTTTTGTCATTGAGCCATGTTCATTaGCATCTGCTGAGATGGATG +
Preference number: 4 (lower is better)
Translates to: ARRYEPNILMSPENYVLSLSHVH*HLLRWM
Trigger: CATCCATCTCAGCAGATGCCAATGAACATGGCTCAA...TGACAAAACGTAGTTTTCTGGACTCATCAGAATGTTAGGCTCATACCTTCTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CCA 90 bp GCCAGAAGGTATGAGCCTAACATTCTGATGAGTCCAGAAAACTACGTTTTGTCAAAAGGTTCATCTCTGTaGTATCCATCGTGGTGCTCT +
Preference number: 4 (lower is better)
Translates to: ARRYEPNILMSPENYVLSKGSSL*YPSWCS
Trigger: AGAGCACCACGATGGATACCACAGAGATGAACCTTT...TGACAAAACGTAGTTTTCTGGACTCATCAGAATGTTAGGCTCATACCTTCTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CCA 90 bp AAGAAACAAGAGAGATTCTGTGTACCCTTTACCCATTCCTCCATGTTGCAAAACGCATTCCTTGGCAGATaGGATGCGATGGAAACCAAA +
Preference number: 4 (lower is better)
Translates to: KKQERFCVPFTHSSMLQNAFLGR*DAMETK
Trigger: TTTGGTTTCCATCGCATCCCATCTGCCAAGGAATGC...GTTTTGCAACATGGAGGAATGGGTAAAGGGTACACAGAATCTCTCTTGTTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CCA 90 bp CAGGGCAGTGTTTTCACAATGTATGTTCCAACAATACAGTGCATAGAATCATGGGTATATGAGTACCCATaGCCCATAGCCAGATACTCC +
Preference number: 4 (lower is better)
Translates to: QGSVFTMYVPTIQCIESWVYEYP*PIARYS
Trigger: GGAGTATCTGGCTATGGGCCATGGGTACTCATATAC...CCATGATTCTATGCACTGTATTGTTGGAACATACATTGTGAAAACACTGCCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393006.5
3UTR CAA 72 bp AAAAGAGTTCAGGGCTACAATGGTGCAGGCTTCCTTTaGTTTCTCTTGGTGAGTCCACAAGAAGTTCTTACA +
Preference number: 4 (lower is better)
Translates to: KRVQGYNGAGFL*FLLVSPQEVLT
Trigger: TGTAAGAACTTCTTGTGGACTCACCAAGAGAAACAAAAGGAAGCCTGCACCATTGTAGCCCTGAACTCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
3UTR CAA 72 bp GATATTAACACCAATATCATAGAGAACATCAGCCATTaGTCTGAGACGGGAGATACCAGTGTCCCACACATG +
Preference number: 4 (lower is better)
Translates to: DINTNIIENISH*SETGDTSVPHM
Trigger: CATGTGTGGGACACTGGTATCTCCCGTCTCAGACAAATGGCTGATGTTCTCTATGATATTGGTGTTAATATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393006.5
CDS-3UTR TCA 90 bp TGCCCAGAAAAGAGTTCAGGGCTACAATGGTGCAGGCTTCCTTTTGTTTCTCTTTGTTGCAAAATTGTTTaGGGACCTATTTTGGTCCAT +
Preference number: 4 (lower is better)
Translates to: CPEKSSGLQWCRLPFVSLCCKIV*GPILVH
Trigger: ATGGACCAAAATAGGTCCTCAAACAATTTTGCAACA...AAGAGAAACAAAAGGAAGCCTGCACCATTGTAGCCCTGAACTCTTTTCTGGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR TCA 90 bp CTGTATCTGGTGGAAACCATGGATTTCTACAAGCTCGAATTATTCCTCATTGTATACGTTCCCCAAGTTTaGGGACCACTTTTCTGTGCA +
Preference number: 4 (lower is better)
Translates to: LYLVETMDFYKLELFLIVYVPQV*GPLFCA
Trigger: TGCACAGAAAAGTGGTCCTCAAACTTGGGGAACGTA...TACAATGAGGAATAATTCGAGCTTGTAGAAATCCATGGTTTCCACCAGATACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR TCA 90 bp CTGTATCTGGTGGAAACCATGGATTTCTACAAGCTCGAATTATTCCTCATTGTATGCACATCAGTTACTTaGAGAGCCACACCTCAGATC +
Preference number: 4 (lower is better)
Translates to: LYLVETMDFYKLELFLIVCTSVT*RATPQI
Trigger: GATCTGAGGTGTGGCTCTTCAAGTAACTGATGTGCA...TACAATGAGGAATAATTCGAGCTTGTAGAAATCCATGGTTTCCACCAGATACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR TCA 90 bp CTTGACAATGATCTGCTTACAGCTGCAAAGCTTGAAGAACCCATTCATTACTCCTACAGCTGCAAAGCTTaGAGAACCCATTCATTACTC +
Preference number: 4 (lower is better)
Translates to: LDNDLLTAAKLEEPIHYSYSCKA*RTHSLL
Trigger: GAGTAATGAATGGGTTCTTCAAGCTTTGCAGCTGTA...GGAGTAATGAATGGGTTCTTCAAGCTTTGCAGCTGTAAGCAGATCATTGTCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409658.7
CDS-3UTR TCA 90 bp GAACCCATTCATTACTCCGTTAATGTTTGCCACATCCAGTTATCTGTGAGGGTTTGCTTAGCTTTATTCTaGGGCTGCAGCAATTCTTCA +
Preference number: 4 (lower is better)
Translates to: EPIHYSVNVCHIQLSVRVCLALF*GCSNSS
Trigger: TGAAGAATTGCTGCAGCCTCAGAATAAAGCTAAGCA...AACCCTCACAGATAACTGGATGTGGCAAACATTAACGGAGTAATGAATGGGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409658.7
CDS-3UTR TCA 90 bp AAGCTGAAACAATGTGGGCTGTCTATTAAAAGACTGATTGCTAAACATCCCTACGGACTGCCAGGAGAATaGCGGCTATCTAAATCAAAC +
Preference number: 4 (lower is better)
Translates to: KLKQCGLSIKRLIAKHPYGLPGE*RLSKSN
Trigger: GTTTGATTTAGATAGCCGTCATTCTCCTGGCAGTCC...GTAGGGATGTTTAGCAATCAGTCTTTTAATAGACAGCCCACATTGTTTCAGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409658.7
CDS-3UTR GCA 90 bp CAAGCCGGCCATGTAGTACAAATGTGGTGTACTGAAAAACCAACTGCTTTCAAAATCATTGTAATAACCTaGATCAGGCTGAATTGCCCG +
Preference number: 4 (lower is better)
Translates to: QAGHVVQMWCTEKPTAFKIIVIT*IRLNCP
Trigger: CGGGCAATTCAGCCTGATGCAGGTTATTACAATGAT...TTTGAAAGCAGTTGGTTTTTCAGTACACCACATTTGTACTACATGGCCGGCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409658.7
CDS-3UTR GCA 90 bp CAGAAAGCAGCAGCAAAGTCCGCTGTAAGAAAGAGTACTCTGAGGTGTGTGTGTTTGTTCATGTTCGACTaGCAATATTTCACATATCCT +
Preference number: 4 (lower is better)
Translates to: QKAAAKSAVRKSTLRCVCLFMFD*QYFTYP
Trigger: AGGATATGTGAAATATTGGCAGTCGAACATGAACAA...ACACACACACCTCAGAGTACTCTTTCTTACAGCGGACTTTGCTGCTGCTTTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393006.5
CDS-3UTR GCA 90 bp TCTAAAGGGCATGTGACTTTATTTCTGACTAACATCAAGTTCCTCTCCTCATCAAGAGGCGTTTTCTGTTaGTGGAATGGTATTGGCCCT +
Preference number: 4 (lower is better)
Translates to: SKGHVTLFLTNIKFLSSSRGVFC*WNGIGP
Trigger: AGGGCCAATACCATTCCAGCAACAGAAAACGCCTCT...TGATGAGGAGAGGAACTTGATGTTAGTCAGAAATAAAGTCACATGCCCTTTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR GCA 90 bp AATTTGGTCACGAGTCTTCTTTTCTCAAGAGTACTTCCAAGTCTGCCAGAAGGCGTTCCAACAATACAGTaGATAGAATCATGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: NLVTSLLFSRVLPSLPEGVPTIQ*IESWVK
Trigger: CTTCACCCATGATTCTATGCACTGTATTGTTGGAAC...GCCTTCTGGCAGACTTGGAAGTACTCTTGAGAAAAGAAGACTCGTGACCAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393006.5
CDS-3UTR GCA 90 bp CAGAAGAAAAGTCCTAGAGTCTTCTTGACAATGATCTGCTTACAGCTGCAAAGCGTAAACAAGCAGCAATaGCACCCGAACTTAGTAACA +
Preference number: 4 (lower is better)
Translates to: QKKSPRVFLTMICLQLQSVNKQQ*HPNLVT
Trigger: TGTTACTAAGTTCGGGTGGCATTGCTGCTTGTTTAC...GCTTTGCAGCTGTAAGCAGATCATTGTCAAGAAGACTCTAGGACTTTTCTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409658.7
CDS-3UTR CCA 90 bp GTTTTGCTGAAACTTACATATCAGGCTGCTGTTAAACTCTTTTACAATAACGTGCGAGGTGCCTGGTGCTaGAACCTTGGCATATGGAAA +
Preference number: 4 (lower is better)
Translates to: VLLKLTYQAAVKLFYNNVRGAWC*NLGIWK
Trigger: TTTCCATATGCCAAGGTTCCAGCACCAGGCACCTCG...CACGTTATTGTAAAAGAGTTTAACAGCAGCCTGATATGTAAGTTTCAGCAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393006.5
CDS-3UTR CCA 90 bp TATGAGTACCCATGGCCCATAGCCAGATACTCCAGTTGGACAGAGGATTTAAGACAACATTCCTATAGGTaGGACCAGATCATTGTAATA +
Preference number: 4 (lower is better)
Translates to: YEYPWPIARYSSWTEDLRQHSYR*DQIIVI
Trigger: TATTACAATGATCTGGTCCCACCTATAGGAATGTTG...TCTTAAATCCTCTGTCCAACTGGAGTATCTGGCTATGGGCCATGGGTACTCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393006.5
CDS-3UTR CCA 90 bp TCTAAAGGGCATGTGACTTTATTTCTGACTAACATCAAGTTCCTCTCCTCATCATTCACATATCCTCCGTaGTCTGCTGTCAACATCCAC +
Preference number: 4 (lower is better)
Translates to: SKGHVTLFLTNIKFLSSSFTYPP*SAVNIH
Trigger: GTGGATGTTGACAGCAGACCACGGAGGATATGTGAA...TGATGAGGAGAGGAACTTGATGTTAGTCAGAAATAAAGTCACATGCCCTTTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CCA 90 bp AAGCTGAAACAATGTGGGCTGTCTATTAAAAGACTGATTGCTAAACATCCCTACTTCACATATCCTCCGTaGTCTGCTGTCAACATCCAC +
Preference number: 4 (lower is better)
Translates to: KLKQCGLSIKRLIAKHPYFTYPP*SAVNIH
Trigger: GTGGATGTTGACAGCAGACCACGGAGGATATGTGAA...GTAGGGATGTTTAGCAATCAGTCTTTTAATAGACAGCCCACATTGTTTCAGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409658.7
CDS-3UTR CCA 90 bp CATCCAGAAGATTGCATTTTCTCTTCAGAGTACAATTTTCCATCTGTCAGAGCAGCCTCCTTATGTGCCTaGAACATCTTGACGTTGTTC +
Preference number: 4 (lower is better)
Translates to: HPEDCIFSSEYNFPSVRAASLCA*NILTLF
Trigger: GAACAACGTCAAGATGTTCCAGGCACATAAGGAGGC...TGCTCTGACAGATGGAAAATTGTACTCTGAAGAGAAAATGCAATCTTCTGGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CCA 90 bp CAACCAGGTCTTCACTTAAGCCTTTTTCCACTTTGTGTGAATTCTGAAGTTGTTGCCTCCTTATGTGCCTaGAACATCTTGACGTTGTTC +
Preference number: 4 (lower is better)
Translates to: QPGLHLSLFPLCVNSEVVASLCA*NILTLF
Trigger: GAACAACGTCAAGATGTTCCAGGCACATAAGGAGGC...AACAACTTCAGAATTCACACAAAGTGGAAAAAGGCTTAAGTGAAGACCTGGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409658.7
CDS-3UTR CCA 90 bp CTGTATCTGGTGGAAACCATGGATTTCTACAAGCTCGAATTATTCCTCATTGTAAATGCAGTCAGAACCTaGGAAGTAGGTCCCAGACAT +
Preference number: 4 (lower is better)
Translates to: LYLVETMDFYKLELFLIVNAVRT*EVGPRH
Trigger: ATGTCTGGGACCTACTTCCCAGGTTCTGACTGCATT...TACAATGAGGAATAATTCGAGCTTGTAGAAATCCATGGTTTCCACCAGATACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CCA 90 bp CAGAAGAAAAGTCCTAGAGTCTTCTTGACAATGATCTGCTTACAGCTGCAAAGCAACTCCCTTGAACTTTaGAATCCTATGAAGGACCAG +
Preference number: 4 (lower is better)
Translates to: QKKSPRVFLTMICLQLQSNSLEL*NPMKDQ
Trigger: CTGGTCCTTCATAGGATTCCAAAGTTCAAGGGAGTT...GCTTTGCAGCTGTAAGCAGATCATTGTCAAGAAGACTCTAGGACTTTTCTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409658.7
CDS-3UTR CCA 90 bp TGGAGGTGTAAGCCAGTATTGTGGTTTTGTGATGATTTAACCACAAATGTCTTCTGGGAACAAGTACCCTaGCTACAAGGAAGGAAAAGG +
Preference number: 4 (lower is better)
Translates to: WRCKPVLWFCDDLTTNVFWEQVP*LQGRKR
Trigger: CCTTTTCCTTCCTTGTAGCCAGGGTACTTGTTCCCA...GAAGACATTTGTGGTTAAATCATCACAAAACCACAATACTGGCTTACACCTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409658.7
CDS-3UTR TCA 90 bp CTGTATCTGGTGGAAACCATGGATTTCTACAAGCTCGAATTATTCCTCATTGTATGGGATCCCAGAACTTaGTTGGCTGTTGACTATCTT +
Preference number: 4 (lower is better)
Translates to: LYLVETMDFYKLELFLIVWDPRT*LAVDYL
Trigger: AAGATAGTCAACAGCCAATCAAGTTCTGGGATCCCA...TACAATGAGGAATAATTCGAGCTTGTAGAAATCCATGGTTTCCACCAGATACAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR TCA 90 bp GCCAGAAGGTATGAGCCTAACATTCTGATGAGTCCAGAAAACTACGTTTTGTCAGGTCTTAGGTTCGGCTaGGTAAAGAAAAAGGATTTT +
Preference number: 4 (lower is better)
Translates to: ARRYEPNILMSPENYVLSGLRFG*VKKKDF
Trigger: AAAATCCTTTTTCTTTACTCAGCCGAACCTAAGACC...TGACAAAACGTAGTTTTCTGGACTCATCAGAATGTTAGGCTCATACCTTCTGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR TCA 90 bp TCTAAAGGGCATGTGACTTTATTTCTGACTAACATCAAGTTCCTCTCCTCATCATTGTCATTGAACTGGTaGCAGGATGTGAGACGGTTA +
Preference number: 4 (lower is better)
Translates to: SKGHVTLFLTNIKFLSSSLSLNW*QDVRRL
Trigger: TAACCGTCTCACATCCTGTCACCAGTTCAATGACAA...TGATGAGGAGAGGAACTTGATGTTAGTCAGAAATAAAGTCACATGCCCTTTAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR TCA 90 bp CAGGGCAGTGTTTTCACAATGTATGTTCCAACAATACAGTGCATAGAATCATGGAGTCTGCCAGAAGGCTaGTTTTGGAAATGTGAAACA +
Preference number: 4 (lower is better)
Translates to: QGSVFTMYVPTIQCIESWSLPEG*FWKCET
Trigger: TGTTTCACATTTCCAAAATCAGCCTTCTGGCAGACT...CCATGATTCTATGCACTGTATTGTTGGAACATACATTGTGAAAACACTGCCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393006.5
CDS-3UTR TCA 90 bp CAGAAGAAAAGTCCTAGAGTCTTCTTGACAATGATCTGCTTACAGCTGCAAAGCGCCTCAGACACTTCATaGAATAAGCTGAAACAATGT +
Preference number: 4 (lower is better)
Translates to: QKKSPRVFLTMICLQLQSASDTS*NKLKQC
Trigger: ACATTGTTTCAGCTTATTTCATGAAGTGTCTGAGGC...GCTTTGCAGCTGTAAGCAGATCATTGTCAAGAAGACTCTAGGACTTTTCTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409658.7
CDS-3UTR TCA 90 bp CAGAAGAAAAGTCCTAGAGTCTTCTTGACAATGATCTGCTTACAGCTGCAAAGCAAGAAGCCCTTAAAGTaGATGTCGTCAGCTAACATA +
Preference number: 4 (lower is better)
Translates to: QKKSPRVFLTMICLQLQSKKPLK*MSSANI
Trigger: TATGTTAGCTGACGACATTCACTTTAAGGGCTTCTT...GCTTTGCAGCTGTAAGCAGATCATTGTCAAGAAGACTCTAGGACTTTTCTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409658.7
CDS-3UTR GCA 90 bp GGCTATCTAAATCAAACCACAGTGTCAATATGTTGGGAACAAGTACCCTGGCTACATTGCTTGCTGTTGTaGAAAATCAGGTCGCTTATA +
Preference number: 4 (lower is better)
Translates to: GYLNQTTVSICWEQVPWLHCLLL*KIRSLI
Trigger: TATAAGCGACCTGATTTTGCACAACAGCAAGCAATG...TAGCCAGGGTACTTGTTCCCAACATATTGACACTGTGGTTTGATTTAGATAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409658.7
CDS-3UTR GCA 90 bp ACAGTGTCAATATGTTGGGAACAAGTACCCTGGCTACAAGGAAGGAAAAGGAATAGTAAGCTGTTGCATTaGTTGCTGTTGTGCAAAATC +
Preference number: 4 (lower is better)
Translates to: TVSICWEQVPWLQGRKRNSKLLH*LLLCKI
Trigger: GATTTTGCACAACAGCAAGCAATGCAACAGCTTACT...ATTCCTTTTCCTTCCTTGTAGCCAGGGTACTTGTTCCCAACATATTGACACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409658.7
CDS-3UTR GCA 90 bp GTGTGTGTACATATGTGTGTGTGTATGTTCGGGCACATGTTATTCAACAGTCACTCAAAAGTAAGCTGTTaGATTGCTTGCTGTTGTGCA +
Preference number: 4 (lower is better)
Translates to: VCVHMCVCMFGHMLFNSHSKVSC*IACCCA
Trigger: TGCACAACAGCAAGCAATGCAACAGCTTACTTTTGA...GTGACTGTTGAATAACATGTGCCCGAACATACACACACACATATGTACACACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393006.5
CDS-3UTR GCA 90 bp TGCCCAGAAAAGAGTTCAGGGCTACAATGGTGCAGGCTTCCTTTTGTTTCTCTTTGTGATCTGGTTATCTaGTTACTGAGATACTATGTT +
Preference number: 4 (lower is better)
Translates to: CPEKSSGLQWCRLPFVSLCDLVI*LLRYYV
Trigger: AACATAGTATCTCAGTAAGCAGATAACCAGATCACA...AAGAGAAACAAAAGGAAGCCTGCACCATTGTAGCCCTGAACTCTTTTCTGGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR GCA 90 bp CTTGACAATGATCTGCTTACAGCTGCAAAGCTTGAAGAACCCATTCATTACTCCACTACTTCAGAAAGGTaGCAGCAAAATGGTGAATGT +
Preference number: 4 (lower is better)
Translates to: LDNDLLTAAKLEEPIHYSTTSER*QQNGEC
Trigger: ACATTCACCATTTTGCTGGCACCTTTCTGAAGTAGT...GGAGTAATGAATGGGTTCTTCAAGCTTTGCAGCTGTAAGCAGATCATTGTCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409658.7
CDS-3UTR CCA 90 bp AGAAAGGCCAGTACCTACACTACGTTAATAATAGATGTATTAGTGCCAGCAGACCAAATTTATTATCCGTaGGTGAGAAACTGGCCTCTC +
Preference number: 4 (lower is better)
Translates to: RKASTYTTLIIDVLVPADQIYYP*VRNWPL
Trigger: GAGAGGCCAGTTTCTCACCCACGGATAATAAATTTG...GTCTGCTGGCACTAATACATCTATTATTAACGTAGTGTAGGTACTGGCCTTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393006.5
CDS-3UTR CCA 90 bp CATCCAGAAGATTGCATTTTCTCTTCAGAGTACAATTTTCCATCTGTCAGAGCACATCAGACCCTCCACTaGCAAAAAGTCCTTCATGAA +
Preference number: 4 (lower is better)
Translates to: HPEDCIFSSEYNFPSVRAHQTLH*QKVLHE
Trigger: TTCATGAAGGACTTTTTGCCAGTGGAGGGTCTGATG...TGCTCTGACAGATGGAAAATTGTACTCTGAAGAGAAAATGCAATCTTCTGGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CCA 90 bp AAGAAACAAGAGAGATTCTGTGTACCCTTTACCCATTCCTCCATGTTGCAAAACCGGAATACCTGTATCTaGTGGAAACCATGGATTTCT +
Preference number: 4 (lower is better)
Translates to: KKQERFCVPFTHSSMLQNRNTCI*WKPWIS
Trigger: AGAAATCCATGGTTTCCACCAGATACAGGTATTCCG...GTTTTGCAACATGGAGGAATGGGTAAAGGGTACACAGAATCTCTCTTGTTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CCA 90 bp GTGTGTGTACATATGTGTGTGTGTATGTTCGGGCACATGTTATTCAACAGTCACATCTGTGGGAGAATTTaGTCACGAGTCTTCTTTTCT +
Preference number: 4 (lower is better)
Translates to: VCVHMCVCMFGHMLFNSHICGRI*SRVFFS
Trigger: AGAAAAGAAGACTCGTGACCAAATTCTCCCACAGAT...GTGACTGTTGAATAACATGTGCCCGAACATACACACACACATATGTACACACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393006.5
CDS-3UTR TCA 90 bp GTTTTGCTGAAACTTACATATCAGGCTGCTGTTAAACTCTTTTACAATAACGTGGTGCCTGGAACATCTTaGCGTTGTTCATGTTCGACT +
Preference number: 4 (lower is better)
Translates to: VLLKLTYQAAVKLFYNNVVPGTS*RCSCST
Trigger: AGTCGAACATGAACAACGTCAAGATGTTCCAGGCAC...CACGTTATTGTAAAAGAGTTTAACAGCAGCCTGATATGTAAGTTTCAGCAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393006.5
CDS-3UTR TCA 90 bp CATCCAGAAGATTGCATTTTCTCTTCAGAGTACAATTTTCCATCTGTCAGAGCAACTTGGCACACGCTCTaGAAACTGAGATTTTGTCAT +
Preference number: 4 (lower is better)
Translates to: HPEDCIFSSEYNFPSVRATWHTL*KLRFCH
Trigger: ATGACAAAATCTCAGTTTTCAGAGCGTGTGCCAAGT...TGCTCTGACAGATGGAAAATTGTACTCTGAAGAGAAAATGCAATCTTCTGGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR TCA 90 bp AGAAAGGCCAGTACCTACACTACGTTAATAATAGATGTATTAGTGCCAGCAGACCTGTTATTCACCTCTTaGCAGAAAGGAAGTAACAAC +
Preference number: 4 (lower is better)
Translates to: RKASTYTTLIIDVLVPADLLFTS*QKGSNN
Trigger: GTTGTTACTTCCTTTCTGTCAAGAGGTGAATAACAG...GTCTGCTGGCACTAATACATCTATTATTAACGTAGTGTAGGTACTGGCCTTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393006.5
CDS-3UTR TCA 90 bp AAGATTGATGGGAGTCTGGCACTAAATACCAAGACTATTAGAAAGGCCAGTACCCTTCTGGCATCAAAGTaGGCAAATTCTTATGACTAT +
Preference number: 4 (lower is better)
Translates to: KIDGSLALNTKTIRKASTLLASK*ANSYDY
Trigger: ATAGTCATAAGAATTTGCTCACTTTGATGCCAGAAG...GGTACTGGCCTTTCTAATAGTCTTGGTATTTAGTGCCAGACTCCCATCAATCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393006.5
CDS-3UTR TCA 90 bp CAGGGCAGTGTTTTCACAATGTATGTTCCAACAATACAGTGCATAGAATCATGGCAAAATGTAAGGATTTaGTCAGAACTGAGTGGTAGC +
Preference number: 4 (lower is better)
Translates to: QGSVFTMYVPTIQCIESWQNVRI*SELSGS
Trigger: GCTACCACTCAGTTCTGATCAAATCCTTACATTTTG...CCATGATTCTATGCACTGTATTGTTGGAACATACATTGTGAAAACACTGCCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393006.5
CDS-3UTR TCA 90 bp AATAAAAACACTGTGCTGCATTATAAACAGGAGAGGGAAGAATCCAGTGAAGAAACATATTGCAAAGGCTaGTACCGGGACAACACTACT +
Preference number: 4 (lower is better)
Translates to: NKNTVLHYKQEREESSEETYCKG*YRDNTT
Trigger: AGTAGTGTTGTCCCGGTATCAGCCTTTGCAATATGT...TTCTTCACTGGATTCTTCCCTCTCCTGTTTATAATGCAGCACAGTGTTTTTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409658.7
CDS-3UTR TCA 90 bp TGGAGGTGTAAGCCAGTATTGTGGTTTTGTGATGATTTAACCACAAATGTCTTCAACTTTGGAATCCTATaGAGGACCAGCTGTGTAAAC +
Preference number: 4 (lower is better)
Translates to: WRCKPVLWFCDDLTTNVFNFGIL*RTSCVN
Trigger: GTTTACACAGCTGGTCCTTCATAGGATTCCAAAGTT...GAAGACATTTGTGGTTAAATCATCACAAAACCACAATACTGGCTTACACCTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409658.7
CDS-3UTR GCA 90 bp AAGAAACAAGAGAGATTCTGTGTACCCTTTACCCATTCCTCCATGTTGCAAAACCATTGCTTGCTGTTGTaGAAAATCAGGTCGCTTATA +
Preference number: 4 (lower is better)
Translates to: KKQERFCVPFTHSSMLQNHCLLL*KIRSLI
Trigger: TATAAGCGACCTGATTTTGCACAACAGCAAGCAATG...GTTTTGCAACATGGAGGAATGGGTAAAGGGTACACAGAATCTCTCTTGTTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR GCA 90 bp CAGGGCAGTGTTTTCACAATGTATGTTCCAACAATACAGTGCATAGAATCATGGCATTGCTTGCTGTTGTaGAAAATCAGGTCGCTTATA +
Preference number: 4 (lower is better)
Translates to: QGSVFTMYVPTIQCIESWHCLLL*KIRSLI
Trigger: TATAAGCGACCTGATTTTGCACAACAGCAAGCAATG...CCATGATTCTATGCACTGTATTGTTGGAACATACATTGTGAAAACACTGCCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393006.5
CDS-3UTR GCA 90 bp AAGAAACAAGAGAGATTCTGTGTACCCTTTACCCATTCCTCCATGTTGCAAAACCCCATTCCTCCATGTTaGAAAACTAGCACAATATCA +
Preference number: 4 (lower is better)
Translates to: KKQERFCVPFTHSSMLQNPIPPC*KTSTIS
Trigger: TGATATTGTGCTAGTTTTGCAACATGGAGGAATGGG...GTTTTGCAACATGGAGGAATGGGTAAAGGGTACACAGAATCTCTCTTGTTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR GCA 90 bp AATTTGGTCACGAGTCTTCTTTTCTCAAGAGTACTTCCAAGTCTGCCAGAAGGCATTATTCCAAAACACTaGCTGAGGGTGTATAAAATG +
Preference number: 4 (lower is better)
Translates to: NLVTSLLFSRVLPSLPEGIIPKH*LRVYKM
Trigger: CATTTTATACACCCTCAGGCAGTGTTTTGGAATAAT...GCCTTCTGGCAGACTTGGAAGTACTCTTGAGAAAAGAAGACTCGTGACCAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393006.5
CDS-3UTR GCA 90 bp CTTGACAATGATCTGCTTACAGCTGCAAAGCTTGAAGAACCCATTCATTACTCCATTGTGTTTATAGGGTaGAGAAAGTTTCCCAGAAAC +
Preference number: 4 (lower is better)
Translates to: LDNDLLTAAKLEEPIHYSIVFIG*RKFPRN
Trigger: GTTTCTGGGAAACTTTCTGCACCCTATAAACACAAT...GGAGTAATGAATGGGTTCTTCAAGCTTTGCAGCTGTAAGCAGATCATTGTCAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409658.7
CDS-3UTR GCA 90 bp TGGAGGTGTAAGCCAGTATTGTGGTTTTGTGATGATTTAACCACAAATGTCTTCAAAACCAGTGCAAAATaGGGCAGACAGTACATCTCT +
Preference number: 4 (lower is better)
Translates to: WRCKPVLWFCDDLTTNVFKTSAK*GRQYIS
Trigger: AGAGATGTACTGTCTGCCGCATTTTGCACTGGTTTT...GAAGACATTTGTGGTTAAATCATCACAAAACCACAATACTGGCTTACACCTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409658.7
CDS-3UTR CCA 90 bp GAACCCATTCATTACTCCGTTAATGTTTGCCACATCCAGTTATCTGTGAGGGTTATGGATTGTAGTCTATaGTTTTTCGGTTCACAGCTT +
Preference number: 4 (lower is better)
Translates to: EPIHYSVNVCHIQLSVRVMDCSL*FFGSQL
Trigger: AAGCTGTGAACCGAAAAACCATAGACTACAATCCAT...AACCCTCACAGATAACTGGATGTGGCAAACATTAACGGAGTAATGAATGGGTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409658.7
CDS-3UTR CCA 90 bp CAGAAGAAAAGTCCTAGAGTCTTCTTGACAATGATCTGCTTACAGCTGCAAAGCCAACATTCCTATAGGTaGGACCAGATCATTGTAATA +
Preference number: 4 (lower is better)
Translates to: QKKSPRVFLTMICLQLQSQHSYR*DQIIVI
Trigger: TATTACAATGATCTGGTCCCACCTATAGGAATGTTG...GCTTTGCAGCTGTAAGCAGATCATTGTCAAGAAGACTCTAGGACTTTTCTTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409658.7
CDS-3UTR CCA 90 bp CTGTATCTGGTGGAAACCATGGATTTCTACAAGCTCGAATTATTCCTCATTGTAATCAAAATTCTCCTCTaGACCAAAGTCTTCAGGACC +
Preference number: 4 (lower is better)
Translates to: LYLVETMDFYKLELFLIVIKILL*TKVFRT
Trigger: GGTCCTGAAGACTTTGGTCCAGAGGAGAATTTTGAT...TACAATGAGGAATAATTCGAGCTTGTAGAAATCCATGGTTTCCACCAGATACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CCA 90 bp TGTAGAAAAGTTTCACATCTTCCTGGCAAGCTATTCCATGAATGTTGCACCTTTACAGTGTCAATATGTTaGGAACAAGTACCCTGGCTA +
Preference number: 4 (lower is better)
Translates to: CRKVSHLPGKLFHECCTFTVSIC*EQVPWL
Trigger: TAGCCAGGGTACTTGTTCCCAACATATTGACACTGT...AAAGGTGCAACATTCATGGAATAGCTTGCCAGGAAGATGTGAAACTTTTCTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409658.7
3UTR CAA 72 bp TCAACAGTGAATCAGAAGAAAAGTCCTAGAGTCTTCTaGACAATGATCTGCTTACAGCTGCAAAGCTTGAAG +
Preference number: 4 (lower is better)
Translates to: STVNQKKSPRVF*TMICLQLQSLK
Trigger: CTTCAAGCTTTGCAGCTGTAAGCAGATCATTGTCAAGAAGACTCTAGGACTTTTCTTCTGATTCACTGTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409658.7
CDS-3UTR TCA 90 bp AAGAAACAAGAGAGATTCTGTGTACCCTTTACCCATTCCTCCATGTTGCAAAACAACTTGATTGGCTGTTaGCTATCTTTACTTCCTGAA +
Preference number: 4 (lower is better)
Translates to: KKQERFCVPFTHSSMLQNNLIGC*LSLLPE
Trigger: TTCAGGAAGTAAAGATAGTCAACAGCCAATCAAGTT...GTTTTGCAACATGGAGGAATGGGTAAAGGGTACACAGAATCTCTCTTGTTTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR TCA 90 bp TCTAAAGGGCATGTGACTTTATTTCTGACTAACATCAAGTTCCTCTCCTCATCAACACGCTCTGAAAACTaGGATTTTGTCATTGAACTG +
Preference number: 4 (lower is better)
Translates to: SKGHVTLFLTNIKFLSSSTRSEN*DFVIEL
Trigger: CAGTTCAATGACAAAATCTCAGTTTTCAGAGCGTGT...TGATGAGGAGAGGAACTTGATGTTAGTCAGAAATAAAGTCACATGCCCTTTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR TCA 90 bp TGTAGAAAAGTTTCACATCTTCCTGGCAAGCTATTCCATGAATGTTGCACCTTTGTGCCAGCAAAATGGTaGATGTGTGAAAACAAAGAA +
Preference number: 4 (lower is better)
Translates to: CRKVSHLPGKLFHECCTFVPAKW*MCENKE
Trigger: TTCTTTGTTTTCACACATTCACCATTTTGCTGGCAC...AAAGGTGCAACATTCATGGAATAGCTTGCCAGGAAGATGTGAAACTTTTCTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409658.7
CDS-3UTR TCA 90 bp TGTAGAAAAGTTTCACATCTTCCTGGCAAGCTATTCCATGAATGTTGCACCTTTCTTCATGAAATAAGCTaGAACAATGTGGGCTGTCTA +
Preference number: 4 (lower is better)
Translates to: CRKVSHLPGKLFHECCTFLHEIS*NNVGCL
Trigger: TAGACAGCCCACATTGTTTCAGCTTATTTCATGAAG...AAAGGTGCAACATTCATGGAATAGCTTGCCAGGAAGATGTGAAACTTTTCTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409658.7
CDS-3UTR GCA 90 bp CTGTATCTGGTGGAAACCATGGATTTCTACAAGCTCGAATTATTCCTCATTGTATCAAAAGTAAGCTGTTaGATTGCTTGCTGTTGTGCA +
Preference number: 4 (lower is better)
Translates to: LYLVETMDFYKLELFLIVSKVSC*IACCCA
Trigger: TGCACAACAGCAAGCAATGCAACAGCTTACTTTTGA...TACAATGAGGAATAATTCGAGCTTGTAGAAATCCATGGTTTCCACCAGATACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR GCA 90 bp CAACCAGGTCTTCACTTAAGCCTTTTTCCACTTTGTGTGAATTCTGAAGTTGTTTCAAAAGTAAGCTGTTaGATTGCTTGCTGTTGTGCA +
Preference number: 4 (lower is better)
Translates to: QPGLHLSLFPLCVNSEVVSKVSC*IACCCA
Trigger: TGCACAACAGCAAGCAATGCAACAGCTTACTTTTGA...AACAACTTCAGAATTCACACAAAGTGGAAAAAGGCTTAAGTGAAGACCTGGTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409658.7
CDS-3UTR GCA 90 bp TCTAAAGGGCATGTGACTTTATTTCTGACTAACATCAAGTTCCTCTCCTCATCATCTCTCTGGTCTCTTTaGCATATTCTGTTCTCCAAA +
Preference number: 4 (lower is better)
Translates to: SKGHVTLFLTNIKFLSSSSLWSL*HILFSK
Trigger: TTTGGAGAACAGAATATGGCAAAGAGACCAGAGAGA...TGATGAGGAGAGGAACTTGATGTTAGTCAGAAATAAAGTCACATGCCCTTTAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR GCA 90 bp AAGAAACAAGAGAGATTCTGTGTACCCTTTACCCATTCCTCCATGTTGCAAAACATATCTAATTGCTGCTaGCTTCATTTTAGGTTCAGC +
Preference number: 4 (lower is better)
Translates to: KKQERFCVPFTHSSMLQNISNCC*LHFRFS
Trigger: GCTGAACCTAAAATGAAGGCAGCAGCAATTAGATAT...GTTTTGCAACATGGAGGAATGGGTAAAGGGTACACAGAATCTCTCTTGTTTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR GCA 90 bp TGTAGAAAAGTTTCACATCTTCCTGGCAAGCTATTCCATGAATGTTGCACCTTTTTCTTGACAATGATCTaGTTACAGCTGCAAAGCTTG +
Preference number: 4 (lower is better)
Translates to: CRKVSHLPGKLFHECCTFFLTMI*LQLQSL
Trigger: CAAGCTTTGCAGCTGTAAGCAGATCATTGTCAAGAA...AAAGGTGCAACATTCATGGAATAGCTTGCCAGGAAGATGTGAAACTTTTCTACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409658.7
CDS-3UTR GCA 90 bp CATTACTCCGTTAATGTTTGCCACATCCAGTTATCTGTGAGGGTTTTAGTCCTAATTATCATCAGCTTCTaGCTCAGACACTTCATGAAA +
Preference number: 4 (lower is better)
Translates to: HYSVNVCHIQLSVRVLVLIIISF*LRHFMK
Trigger: TTTCATGAAGTGTCTGAGGCAGAAGCTGATGATAAT...TAGGACTAAAACCCTCACAGATAACTGGATGTGGCAAACATTAACGGAGTAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409658.7
CDS-3UTR GCA 90 bp CATTACTCCGTTAATGTTTGCCACATCCAGTTATCTGTGAGGGTTTTAGTCCTAATAAAAACACTGTGCTaGATTATAAACAGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: HYSVNVCHIQLSVRVLVLIKTLC*IINRRG
Trigger: CCCTCTCCTGTTTATAATGCAGCACAGTGTTTTTAT...TAGGACTAAAACCCTCACAGATAACTGGATGTGGCAAACATTAACGGAGTAATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409658.7
CDS-3UTR CCA 90 bp AGAAAGGCCAGTACCTACACTACGTTAATAATAGATGTATTAGTGCCAGCAGACATGGATTGTAGTCTATaGTTTTTCGGTTCACAGCTT +
Preference number: 4 (lower is better)
Translates to: RKASTYTTLIIDVLVPADMDCSL*FFGSQL
Trigger: AAGCTGTGAACCGAAAAACCATAGACTACAATCCAT...GTCTGCTGGCACTAATACATCTATTATTAACGTAGTGTAGGTACTGGCCTTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393006.5
CDS-3UTR CCA 90 bp ACTAAGGCAAAATCTACAAAGCAGAAGCATGTTCATCCAACAATTTCTGTTAAGCAAGCGTCTTCCTTCTaGAGTCCACCTAACAACAAA +
Preference number: 4 (lower is better)
Translates to: TKAKSTKQKHVHPTISVKQASSF*SPPNNK
Trigger: TTTGTTGTTAGGTGGACTCCAGAAGGAAGACGCTTG...CTTAACAGAAATTGTTGGATGAACATGCTTCTGCTTTGTAGATTTTGCCTTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409658.7
CDS-3UTR CCA 90 bp TCTAAAGGGCATGTGACTTTATTTCTGACTAACATCAAGTTCCTCTCCTCATCAATCTGGTGGAAACCATaGATTTCTACAAGCTCGAAT +
Preference number: 4 (lower is better)
Translates to: SKGHVTLFLTNIKFLSSSIWWKP*ISTSSN
Trigger: ATTCGAGCTTGTAGAAATCCATGGTTTCCACCAGAT...TGATGAGGAGAGGAACTTGATGTTAGTCAGAAATAAAGTCACATGCCCTTTAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CCA 90 bp CTTGACAATGATCTGCTTACAGCTGCAAAGCTTGAAGAACCCATTCATTACTCCTGTAAGCCAGTATTGTaGTTTTGTGATGATTTAACC +
Preference number: 4 (lower is better)
Translates to: LDNDLLTAAKLEEPIHYSCKPVL*FCDDLT
Trigger: GGTTAAATCATCACAAAACCACAATACTGGCTTACA...GGAGTAATGAATGGGTTCTTCAAGCTTTGCAGCTGTAAGCAGATCATTGTCAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409658.7
CDS-3UTR CCA 90 bp CTTGACAATGATCTGCTTACAGCTGCAAAGCTTGAAGAACCCATTCATTACTCCCATGTAGTACAAATGTaGTGTACTGAAAAACCAACT +
Preference number: 4 (lower is better)
Translates to: LDNDLLTAAKLEEPIHYSHVVQM*CTEKPT
Trigger: AGTTGGTTTTTCAGTACACCACATTTGTACTACATG...GGAGTAATGAATGGGTTCTTCAAGCTTTGCAGCTGTAAGCAGATCATTGTCAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409658.7
CDS-3UTR TCA 90 bp CTGTATCTGGTGGAAACCATGGATTTCTACAAGCTCGAATTATTCCTCATTGTAGTCACAAAAATGGTGTaGCAGAATGTGTTGAAAAAC +
Preference number: 4 (lower is better)
Translates to: LYLVETMDFYKLELFLIVVTKMV*QNVLKN
Trigger: GTTTTTCAACACATTCTGTCACACCATTTTTGTGAC...TACAATGAGGAATAATTCGAGCTTGTAGAAATCCATGGTTTCCACCAGATACAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR TCA 90 bp CAACCAGGTCTTCACTTAAGCCTTTTTCCACTTTGTGTGAATTCTGAAGTTGTTAATGACTACAGTGGATaGTGTTTCCATAAAGATGTC +
Preference number: 4 (lower is better)
Translates to: QPGLHLSLFPLCVNSEVVNDYSG*CFHKDV
Trigger: GACATCTTTATGGAAACATCATCCACTGTAGTCATT...AACAACTTCAGAATTCACACAAAGTGGAAAAAGGCTTAAGTGAAGACCTGGTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409658.7
CDS-3UTR TCA 90 bp TGGAGGTGTAAGCCAGTATTGTGGTTTTGTGATGATTTAACCACAAATGTCTTCACAAATGTGGTGTACTaGAAAACCAACTGCTTTCAA +
Preference number: 4 (lower is better)
Translates to: WRCKPVLWFCDDLTTNVFTNVVY*KTNCFQ
Trigger: TTGAAAGCAGTTGGTTTTTCAGTACACCACATTTGT...GAAGACATTTGTGGTTAAATCATCACAAAACCACAATACTGGCTTACACCTCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409658.7
CDS-3UTR GCA 90 bp GTTTTGCTGAAACTTACATATCAGGCTGCTGTTAAACTCTTTTACAATAACGTGATCATTGTAATAACCTaGATCAGGCTGAATTGCCCG +
Preference number: 4 (lower is better)
Translates to: VLLKLTYQAAVKLFYNNVIIVIT*IRLNCP
Trigger: CGGGCAATTCAGCCTGATGCAGGTTATTACAATGAT...CACGTTATTGTAAAAGAGTTTAACAGCAGCCTGATATGTAAGTTTCAGCAAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393006.5
CDS-3UTR GCA 90 bp TGTAGAAAAGTTTCACATCTTCCTGGCAAGCTATTCCATGAATGTTGCACCTTTATCACACACGAATACTaGTCCCAAAATTATCATCAG +
Preference number: 4 (lower is better)
Translates to: CRKVSHLPGKLFHECCTFITHEY*SQNYHQ
Trigger: CTGATGATAATTTTGGGAGCAGTATTCGTGTGTGAT...AAAGGTGCAACATTCATGGAATAGCTTGCCAGGAAGATGTGAAACTTTTCTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409658.7
CDS-3UTR CCA 90 bp CATCCAGAAGATTGCATTTTCTCTTCAGAGTACAATTTTCCATCTGTCAGAGCAATGGATTGTAGTCTATaGTTTTTCGGTTCACAGCTT +
Preference number: 4 (lower is better)
Translates to: HPEDCIFSSEYNFPSVRAMDCSL*FFGSQL
Trigger: AAGCTGTGAACCGAAAAACCATAGACTACAATCCAT...TGCTCTGACAGATGGAAAATTGTACTCTGAAGAGAAAATGCAATCTTCTGGATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CCA 90 bp TCTAAAGGGCATGTGACTTTATTTCTGACTAACATCAAGTTCCTCTCCTCATCAGCTTCCAATCCAAACTaGGCTAAATGGTATGTTTAT +
Preference number: 4 (lower is better)
Translates to: SKGHVTLFLTNIKFLSSSASNPN*AKWYVY
Trigger: ATAAACATACCATTTAGCCCAGTTTGGATTGGAAGC...TGATGAGGAGAGGAACTTGATGTTAGTCAGAAATAAAGTCACATGCCCTTTAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CCA 90 bp CTGTATCTGGTGGAAACCATGGATTTCTACAAGCTCGAATTATTCCTCATTGTAAATACCTGTATCTGGTaGAAACCATGGATTTCTACA +
Preference number: 4 (lower is better)
Translates to: LYLVETMDFYKLELFLIVNTCIW*KPWIST
Trigger: TGTAGAAATCCATGGTTTCCACCAGATACAGGTATT...TACAATGAGGAATAATTCGAGCTTGTAGAAATCCATGGTTTCCACCAGATACAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CCA 90 bp CATTACTCCGTTAATGTTTGCCACATCCAGTTATCTGTGAGGGTTTTAGTCCTACAAATTTATTATCCGTaGGTGAGAAACTGTTACATG +
Preference number: 4 (lower is better)
Translates to: HYSVNVCHIQLSVRVLVLQIYYP*VRNCYM
Trigger: CATGTAACAGTTTCTCACCCACGGATAATAAATTTG...TAGGACTAAAACCCTCACAGATAACTGGATGTGGCAAACATTAACGGAGTAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409658.7
3UTR CAA 72 bp AGCAAGGTAGAGGTGAATGAACAAGTTCACTTTCAGTaGGCCAGATTAAGGATACACTTCTTTTTAATTGAG +
Preference number: 4 (lower is better)
Translates to: SKVEVNEQVHFQ*ARLRIHFFLIE
Trigger: CTCAATTAAAAAGAAGTGTATCCTTAATCTGGCCAACTGAAAGTGAACTTGTTCATTCACCTCTACCTTGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393006.5
3UTR CAA 72 bp AGTAACACTAAGAAGTGTAGCTTTGATACCTCTATCTaGTCGGTTAATTCATATTGTAAAAGGACTGCCAGG +
Preference number: 4 (lower is better)
Translates to: SNTKKCSFDTSI*SVNSYCKRTAR
Trigger: CCTGGCAGTCCTTTTACAATATGAATTAACCGACAAGATAGAGGTATCAAAGCTACACTTCTTAGTGTTACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409658.7
CDS-3UTR TCA 90 bp TTGATTTGTACCAACTTGTATTTACATGGAAGACCAACAAAGGCTGACCTAAAAAAGACCAACAAAGGCTaGCCTAAAAGAAACTGTCAA +
Preference number: 4 (lower is better)
Translates to: LICTNLYLHGRPTKADLKKTNKG*PKRNCQ
Trigger: TTGACAGTTTCTTTTAGGTCAGCCTTTGTTGGTCTT...TTTTAGGTCAGCCTTTGTTGGTCTTCCATGTAAATACAAGTTGGTACAAATCAA
37% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000393006.5
CDS-3UTR GCA 90 bp TTGATTTGTACCAACTTGTATTTACATGGAAGACCAACAAAGGCTGACCTAAAATCTCTCTGGTCTCTTTaGCATATTCTGTTCTCCAAA +
Preference number: 4 (lower is better)
Translates to: LICTNLYLHGRPTKADLKSLWSL*HILFSK
Trigger: TTTGGAGAACAGAATATGGCAAAGAGACCAGAGAGA...TTTTAGGTCAGCCTTTGTTGGTCTTCCATGTAAATACAAGTTGGTACAAATCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393006.5
CDS-3UTR GCA 90 bp TCTCATCAAAAGAAGACTTCAACAGAGCAGTTGTTTGAGTTTTCAATCATCAGTTCTCTCTGGTCTCTTTaGCATATTCTGTTCTCCAAA +
Preference number: 4 (lower is better)
Translates to: SHQKKTSTEQLFEFSIISSLWSL*HILFSK
Trigger: TTTGGAGAACAGAATATGGCAAAGAGACCAGAGAGA...ACTGATGATTGAAAACTCAAACAACTGCTCTGTTGAAGTCTTCTTTTGATGAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409658.7
CDS-3UTR GCA 90 bp TCTAAAGGGCATGTGACTTTATTTCTGACTAACATCAAGTTCCTCTCCTCATCAAATGTAGCCATTTCTTaGTCAATTTCTGCTTGTGTT +
Preference number: 4 (lower is better)
Translates to: SKGHVTLFLTNIKFLSSSNVAIS*SISACV
Trigger: AACACAAGCAGAAATTGAGCAAGAAATGGCTACATT...TGATGAGGAGAGGAACTTGATGTTAGTCAGAAATAAAGTCACATGCCCTTTAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR GCA 90 bp ACTAAGGCAAAATCTACAAAGCAGAAGCATGTTCATCCAACAATTTCTGTTAAGTACTCCGTTAATGTTTaGCACATCCAGTTATCTGTG +
Preference number: 4 (lower is better)
Translates to: TKAKSTKQKHVHPTISVKYSVNV*HIQLSV
Trigger: CACAGATAACTGGATGTGGCAAACATTAACGGAGTA...CTTAACAGAAATTGTTGGATGAACATGCTTCTGCTTTGTAGATTTTGCCTTAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409658.7
CDS-3UTR TCA 90 bp TTGATTTGTACCAACTTGTATTTACATGGAAGACCAACAAAGGCTGACCTAAAAAGGTATAAGTTTTGCTaGAACTTACATATCAGGCTG +
Preference number: 4 (lower is better)
Translates to: LICTNLYLHGRPTKADLKRYKFC*NLHIRL
Trigger: CAGCCTGATATGTAAGTTTCAGCAAAACTTATACCT...TTTTAGGTCAGCCTTTGTTGGTCTTCCATGTAAATACAAGTTGGTACAAATCAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393006.5
CDS-3UTR GCA 90 bp AATAAAAACACTGTGCTGCATTATAAACAGGAGAGGGAAGAATCCAGTGAAGAACTATTCCATGAATGTTaGACCTTTGAGGAAAACTTT +
Preference number: 4 (lower is better)
Translates to: NKNTVLHYKQEREESSEELFHEC*TFEENF
Trigger: AAAGTTTTCCTCAAAGGTGCAACATTCATGGAATAG...TTCTTCACTGGATTCTTCCCTCTCCTGTTTATAATGCAGCACAGTGTTTTTATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409658.7
3UTR CAA 72 bp TTCAATATGTACATTATTACAAATCTGTGGGAGAATTaGGTCACGAGTCTTCTTTTCTCAAGAGTACTTCCA +
Preference number: 4 (lower is better)
Translates to: FNMYIITNLWEN*VTSLLFSRVLP
Trigger: TGGAAGTACTCTTGAGAAAAGAAGACTCGTGACCAAATTCTCCCACAGATTTGTAATAATGTACATATTGAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393006.5
CDS-3UTR GCA 90 bp TCTCATCAAAAGAAGACTTCAACAGAGCAGTTGTTTGAGTTTTCAATCATCAGTTTGTTCATGTTCGACTaGCAATATTTCACATATCCT +
Preference number: 4 (lower is better)
Translates to: SHQKKTSTEQLFEFSIISLFMFD*QYFTYP
Trigger: AGGATATGTGAAATATTGGCAGTCGAACATGAACAA...ACTGATGATTGAAAACTCAAACAACTGCTCTGTTGAAGTCTTCTTTTGATGAGA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409658.7
CDS-3UTR CCA 90 bp GTTTTGCTGAAACTTACATATCAGGCTGCTGTTAAACTCTTTTACAATAACGTGATTATTACAAATCTGTaGGAGAATTTGGTCACGAGT +
Preference number: 4 (lower is better)
Translates to: VLLKLTYQAAVKLFYNNVIITNL*ENLVTS
Trigger: ACTCGTGACCAAATTCTCCCACAGATTTGTAATAAT...CACGTTATTGTAAAAGAGTTTAACAGCAGCCTGATATGTAAGTTTCAGCAAAAC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393006.5
CDS GCA 90 bp TCGAACAGCCGCCCCGAGGTCGATTCTCCCAGTTCCTCCAACCTGTaGCCAGGCGCCCGTCCAGGCCCCCAAAGCACGCAACGGCCGAGC +
Preference number: 5 (lower is better)
Translates to: SNSRPEVDSPSSSNL*PGARPGPQSTQRPS
Trigger: GCTCGGCCGTTGCGTGCTTTGGGGGCCTGGACGGGCGCCTGGGCACAGGTTGGAGGAACTGGGAGAATCGACCTCGGGGCGGCTGTTCGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000408998.1
CDS-3UTR CAA 90 bp CCTTTCGCCGTCGCCGACCAATTGCCGCCCGAAGACCGAACCGCTTCAGCGGAGAGGGCCAGGCGGGCCTaGGGGGCCTATGTGACCCTG +
Preference number: 5 (lower is better)
Translates to: PFAVADQLPPEDRTASAERARRA*GAYVTL
Trigger: CAGGGTCACATAGGCCCCCAAGGCCCGCCTGGCCCT...CTCCGCTGAAGCGGTTCGGTCTTCGGGCGGCAATTGGTCGGCGACGGCGAAAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CAA 90 bp GTGTTTCGGCCTAGCCGCGCTCTACGCACCGGTGTTGCTGCTGCGCGCGCGCAACTCTGTCCTTCCTGGTaGAAGGGGGCCCGGGGCCCA +
Preference number: 5 (lower is better)
Translates to: VFRPSRALRTGVAAARAQLCPSW*KGARGP
Trigger: TGGGCCCCGGGCCCCCTTCAACCAGGAAGGACAGAG...TTGCGCGCGCGCAGCAGCAACACCGGTGCGTAGAGCGCGGCTAGGCCGAAACAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CAA 90 bp GTGTTTCGGCCTAGCCGCGCTCTACGCACCGGTGTTGCTGCTGCGCGCGCGCAAGGCCCATGTGATGGTTaGGAGGGCCGCGGGAGTCAC +
Preference number: 5 (lower is better)
Translates to: VFRPSRALRTGVAAARAQGPCDG*EGRGSH
Trigger: GTGACTCCCGCGGCCCTCCAAACCATCACATGGGCC...TTGCGCGCGCGCAGCAGCAACACCGGTGCGTAGAGCGCGGCTAGGCCGAAACAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CAA 90 bp CCTTTCGCCGTCGCCGACCAATTGCCGCCCGAAGACCGAACCGCTTCAGCGGAGCTCTACGCACCGGTGTaGCTGCTGCGCGCGCGCAAG +
Preference number: 5 (lower is better)
Translates to: PFAVADQLPPEDRTASAELYAPV*LLRARK
Trigger: CTTGCGCGCGCGCAGCAGCAACACCGGTGCGTAGAG...CTCCGCTGAAGCGGTTCGGTCTTCGGGCGGCAATTGGTCGGCGACGGCGAAAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS TCA 90 bp GGCCCGCCGCTCTGCTCATGCCGCCTCTCTGACATCGGGCCCATGTaGTGGTTTGGAGGGCCGCGGGAGTCACCTTTGTTGGGGCCAGGT +
Preference number: 5 (lower is better)
Translates to: GPPLCSCRLSDIGPM*WFGGPRESPLLGPG
Trigger: ACCTGGCCCCAACAAAGGTGACTCCCGCGGCCCTCCAAACCATCACATGGGCCCGATGTCAGAGAGGCGGCATGAGCAGAGCGGCGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CAA 90 bp GCGCAAGTTCGCGCTGCTCTGGTCACTGGGCTCGGCGCTGGCGTTGGCGGGAAGACCTTGTGGTCCCATTaGTCCCTGGGGTCCAGGAGG +
Preference number: 5 (lower is better)
Translates to: AQVRAALVTGLGAGVGGKTLWSH*SLGSRR
Trigger: CCTCCTGGACCCCAGGGACAAATGGGACCACAAGGT...CTTCCCGCCAACGCCAGCGCCGAGCCCAGTGACCAGAGCAGCGCGAACTTGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CAA 90 bp GCGCAAGTTCGCGCTGCTCTGGTCACTGGGCTCGGCGCTGGCGTTGGCGGGAAGAGGACCTTGGATCCCTaGAGACCCTGGTCCGCCTTG +
Preference number: 5 (lower is better)
Translates to: AQVRAALVTGLGAGVGGKRTLDP*RPWSAL
Trigger: CAAGGCGGACCAGGGTCTCAAGGGATCCAAGGTCCT...CTTCCCGCCAACGCCAGCGCCGAGCCCAGTGACCAGAGCAGCGCGAACTTGCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CAA 90 bp CCTTTCGCCGTCGCCGACCAATTGCCGCCCGAAGACCGAACCGCTTCAGCGGAGGGGGAGGTCCCAGCATaGATCCTTGGGGTGGAGGCC +
Preference number: 5 (lower is better)
Translates to: PFAVADQLPPEDRTASAEGEVPA*ILGVEA
Trigger: GGCCTCCACCCCAAGGATCAATGCTGGGACCTCCCC...CTCCGCTGAAGCGGTTCGGTCTTCGGGCGGCAATTGGTCGGCGACGGCGAAAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CAA 90 bp CTTGGGGACACCACAAAAGTCCGCAGAGCAGGCACCGCGGCACTTCCGCGAGCGGGGCCCCCTCGGCCTTaGCCTCCTCGGTCTTCAGAA +
Preference number: 5 (lower is better)
Translates to: LGDTTKVRRAGTAALPRAGPPRP*PPRSSE
Trigger: TTCTGAAGACCGAGGAGGCAAAGGCCGAGGGGGCCC...CGCTCGCGGAAGTGCCGCGGTGCCTGCTCTGCGGACTTTTGTGGTGTCCCCAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CAA 90 bp GCGCAAGTTCGCGCTGCTCTGGTCACTGGGCTCGGCGCTGGCGTTGGCGGGAAGCTTTCTGCCACCGCCTaGTCCAAGATGGCGGACCTC +
Preference number: 5 (lower is better)
Translates to: AQVRAALVTGLGAGVGGKLSATA*SKMADL
Trigger: GAGGTCCGCCATCTTGGACAAGGCGGTGGCAGAAAG...CTTCCCGCCAACGCCAGCGCCGAGCCCAGTGACCAGAGCAGCGCGAACTTGCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS GCA 90 bp CCGGTTGGCCTCCAGCCTCCAGCCCCCTCCCATAAGTCTCGAACCTaGCTCGAACAGCCGCCCCGAGGTCGATTCTCCCAGTTCCTCCAA +
Preference number: 5 (lower is better)
Translates to: PVGLQPPAPSHKSRT*LEQPPRGRFSQFLQ
Trigger: TTGGAGGAACTGGGAGAATCGACCTCGGGGCGGCTGTTCGAGGCAGGTTCGAGACTTATGGGAGGGGGCTGGAGGCTGGAGGCCAACCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000408998.1
CDS CCA 90 bp AGGGCCAGGCGGGCCTTGGGGGCCTATGTGACCCTGTGGGCCAGGTaGACCCTGAGGACCCATATGACCTTGAGGACCAGAACTACCTTG +
Preference number: 5 (lower is better)
Translates to: RARRALGAYVTLWAR*TLRTHMTLRTRTTL
Trigger: CAAGGTAGTTCTGGTCCTCAAGGTCATATGGGTCCTCAGGGTCCACCTGGCCCACAGGGTCACATAGGCCCCCAAGGCCCGCCTGGCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CAA 90 bp GCGCAAGTTCGCGCTGCTCTGGTCACTGGGCTCGGCGCTGGCGTTGGCGGGAAGCAGAGGCGTTTTCTGTaGCTGGAATGGTATTGGCCC +
Preference number: 5 (lower is better)
Translates to: AQVRAALVTGLGAGVGGKQRRFL*LEWYWP
Trigger: GGGCCAATACCATTCCAGCAACAGAAAACGCCTCTG...CTTCCCGCCAACGCCAGCGCCGAGCCCAGTGACCAGAGCAGCGCGAACTTGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CAA 90 bp CTTGGGGACACCACAAAAGTCCGCAGAGCAGGCACCGCGGCACTTCCGCGAGCGCGGTGGCCAAAGCGCTaGTCAGGGTGGAAGTCATCT +
Preference number: 5 (lower is better)
Translates to: LGDTTKVRRAGTAALPRARWPKR*SGWKSS
Trigger: AGATGACTTCCACCCTGACAAGCGCTTTGGCCACCG...CGCTCGCGGAAGTGCCGCGGTGCCTGCTCTGCGGACTTTTGTGGTGTCCCCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS CCA 90 bp GATCCCATGAGGATGAGGAGGCCCTTGCATTCCTCTGGGACCAGGTaGTCCCTGCATACCTTGAGTACCCGGAGGCCCCTGTGGGCCCAA +
Preference number: 5 (lower is better)
Translates to: DPMRMRRPLHSSGTR*SLHTLSTRRPLWAQ
Trigger: TTGGGCCCACAGGGGCCTCCGGGTACTCAAGGTATGCAGGGACCACCTGGTCCCAGAGGAATGCAAGGGCCTCCTCATCCTCATGGGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS CCA 90 bp GTCCGCCTTGGATCCCATGAGGATGAGGAGGCCCTTGCATTCCTCTaGGACCAGGTGGTCCCTGCATACCTTGAGTACCCGGAGGCCCCT +
Preference number: 5 (lower is better)
Translates to: VRLGSHEDEEALAFL*DQVVPAYLEYPEAP
Trigger: AGGGGCCTCCGGGTACTCAAGGTATGCAGGGACCACCTGGTCCCAGAGGAATGCAAGGGCCTCCTCATCCTCATGGGATCCAAGGCGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS CCA 90 bp ATCCATCGTGGTGCTCTCCGTCTAAGGAGCTGGAACGCCCAGATTTaGGCACTCTCTGAGCAGGTCCTGGGCCCCCTCGGCCTTTGCCTC +
Preference number: 5 (lower is better)
Translates to: IHRGALRLRSWNAQI*ALSEQVLGPLGLCL
Trigger: GAGGCAAAGGCCGAGGGGGCCCAGGACCTGCTCAGAGAGTGCCCAAATCTGGGCGTTCCAGCTCCTTAGACGGAGAGCACCACGATGGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CAA 90 bp CTTGGGGACACCACAAAAGTCCGCAGAGCAGGCACCGCGGCACTTCCGCGAGCGATGCAGTGGAGGACCTaGTGGTCCCATTTGTCCCTG +
Preference number: 5 (lower is better)
Translates to: LGDTTKVRRAGTAALPRAMQWRT*WSHLSL
Trigger: CAGGGACAAATGGGACCACAAGGTCCTCCACTGCAT...CGCTCGCGGAAGTGCCGCGGTGCCTGCTCTGCGGACTTTTGTGGTGTCCCCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CAA 90 bp CGCCGCAGGCCCTGCCCCTTTCGCCGTCGCCGACCAATTGCCGCCCGAAGACCGGACAGGAACTTAAATTaGTGGAGATGCCCCATGTCT +
Preference number: 5 (lower is better)
Translates to: RRRPCPFRRRRPIAARRPDRNLN*WRCPMS
Trigger: AGACATGGGGCATCTCCACAAATTTAAGTTCCTGTC...CGGTCTTCGGGCGGCAATTGGTCGGCGACGGCGAAAGGGGCAGGGCCTGCGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS TCA 90 bp ACCGGTGGCCAAAGCGCTTGTCAGGGTGGAAGTCATCTGGTCTGCTaGAGTCATCGGGGAAGTCTGGGTGAGGGCCACGCCTATCAGGGG +
Preference number: 5 (lower is better)
Translates to: TGGQSACQGGSHLVC*SHRGSLGEGHAYQG
Trigger: CCCCTGATAGGCGTGGCCCTCACCCAGACTTCCCCGATGACTTCAGCAGACCAGATGACTTCCACCCTGACAAGCGCTTTGGCCACCGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS TCA 90 bp CAGGGTACTCAGTTCCAGCTTCTACCGACCCCTTCCACCACCCCGTaGAGCTCCTCGCCTCGGCGGGCCAGAGTTCATGTTACTCCCTCT +
Preference number: 5 (lower is better)
Translates to: QGTQFQLLPTPSTTP*SSSPRRARVHVTPS
Trigger: AGAGGGAGTAACATGAACTCTGGCCCGCCGAGGCGAGGAGCTTCACGGGGTGGTGGAAGGGGTCGGTAGAAGCTGGAACTGAGTACCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS GCA 90 bp GTAGGGATGCCATGTCCATGCCTTGGAGAGAAGAGGAGCGTTCTCTaGTGGCTGGGGAATGACCGTCGTGAGGGGGATGATCAGGGCGGG +
Preference number: 5 (lower is better)
Translates to: VGMPCPCLGEKRSVL*WLGNDRREGDDQGG
Trigger: CCCGCCCTGATCATCCCCCTCACGACGGTCATTCCCCAGCCAGCAGAGAACGCTCCTCTTCTCTCCAAGGCATGGACATGGCATCCCTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CAA 90 bp CTTGGGGACACCACAAAAGTCCGCAGAGCAGGCACCGCGGCACTTCCGCGAGCGCTGCATCAGGCTGAATaGCCCGCATATCTCTCTGGT +
Preference number: 5 (lower is better)
Translates to: LGDTTKVRRAGTAALPRALHQAE*PAYLSG
Trigger: ACCAGAGAGATATGCGGGCAATTCAGCCTGATGCAG...CGCTCGCGGAAGTGCCGCGGTGCCTGCTCTGCGGACTTTTGTGGTGTCCCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CAA 90 bp GTGTTTCGGCCTAGCCGCGCTCTACGCACCGGTGTTGCTGCTGCGCGCGCGCAAAGACTCTGCCCAGTCTaGGGATCCCAGAACTTGATT +
Preference number: 5 (lower is better)
Translates to: VFRPSRALRTGVAAARAQRLCPV*GSQNLI
Trigger: AATCAAGTTCTGGGATCCCAAGACTGGGCAGAGTCT...TTGCGCGCGCGCAGCAGCAACACCGGTGCGTAGAGCGCGGCTAGGCCGAAACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CAA 90 bp GCGCAAGTTCGCGCTGCTCTGGTCACTGGGCTCGGCGCTGGCGTTGGCGGGAAGAGATGGATGGGGCTGTaGAAAACCTTGAGGAATCTG +
Preference number: 5 (lower is better)
Translates to: AQVRAALVTGLGAGVGGKRWMGL*KTLRNL
Trigger: CAGATTCCTCAAGGTTTTCAACAGCCCCATCCATCT...CTTCCCGCCAACGCCAGCGCCGAGCCCAGTGACCAGAGCAGCGCGAACTTGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS CCA 90 bp AGGACCCTGGTTCTCCCGGGGGCCTGGAGGCCCCTGCATTCCTCTTaGATTCAATCCCATCAGAGGTCCCTGAGACACAGGACCTTGGAT +
Preference number: 5 (lower is better)
Translates to: RTLVLPGAWRPLHSS*IQSHQRSLRHRTLD
Trigger: ATCCAAGGTCCTGTGTCTCAGGGACCTCTGATGGGATTGAATCCAAGAGGAATGCAGGGGCCTCCAGGCCCCCGGGAGAACCAGGGTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CAA 90 bp CGCCGCAGGCCCTGCCCCTTTCGCCGTCGCCGACCAATTGCCGCCCGAAGACCGAATTGGAACTTTATTTaGCATCCAAGCCTGCTGGAA +
Preference number: 5 (lower is better)
Translates to: RRRPCPFRRRRPIAARRPNWNFI*HPSLLE
Trigger: TTCCAGCAGGCTTGGATGCAAAATAAAGTTCCAATT...CGGTCTTCGGGCGGCAATTGGTCGGCGACGGCGAAAGGGGCAGGGCCTGCGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CAA 90 bp CGCCGCAGGCCCTGCCCCTTTCGCCGTCGCCGACCAATTGCCGCCCGAAGACCGCATTTGGAGCAGGAATaGGAACTTTATTTTGCATCC +
Preference number: 5 (lower is better)
Translates to: RRRPCPFRRRRPIAARRPHLEQE*ELYFAS
Trigger: GGATGCAAAATAAAGTTCCAATTCCTGCTCCAAATG...CGGTCTTCGGGCGGCAATTGGTCGGCGACGGCGAAAGGGGCAGGGCCTGCGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS CCA 90 bp CATCAGAGGTCCCTGAGACACAGGACCTTGGATCCCTTGAGACCCTaGTCCGCCTTGGATCCCATGAGGATGAGGAGGCCCTTGCATTCC +
Preference number: 5 (lower is better)
Translates to: HQRSLRHRTLDPLRP*SALDPMRMRRPLHS
Trigger: GGAATGCAAGGGCCTCCTCATCCTCATGGGATCCAAGGCGGACCAGGGTCTCAAGGGATCCAAGGTCCTGTGTCTCAGGGACCTCTGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS CCA 90 bp AATCTGGCTTCCGCCCTCCTTCAAAGCGAGGGAACTCGTCAGGAGTaGGAAGTAAACCCTTCCTTCCTCCTCGTGGGGTACCCCGACCTC +
Preference number: 5 (lower is better)
Translates to: NLASALLQSEGTRQE*EVNPSFLLVGYPDL
Trigger: GAGGTCGGGGTACCCCACGAGGAGGAAGGAAGGGTTTACTTCCCACTCCTGACGAGTTCCCTCGCTTTGAAGGAGGGCGGAAGCCAGATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS CCA 90 bp GTTCATCTCTGTGGTATCCATCGTGGTGCTCTCCGTCTAAGGAGCTaGAACGCCCAGATTTGGGCACTCTCTGAGCAGGTCCTGGGCCCC +
Preference number: 5 (lower is better)
Translates to: VHLCGIHRGALRLRS*NAQIWALSEQVLGP
Trigger: GGGGCCCAGGACCTGCTCAGAGAGTGCCCAAATCTGGGCGTTCCAGCTCCTTAGACGGAGAGCACCACGATGGATACCACAGAGATGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CAA 90 bp CGCCGCAGGCCCTGCCCCTTTCGCCGTCGCCGACCAATTGCCGCCCGAAGACCGTCTTTCAATTTTAAGTaGCTCCAGAAGTTGTGGGTT +
Preference number: 5 (lower is better)
Translates to: RRRPCPFRRRRPIAARRPSFNFK*LQKLWV
Trigger: AACCCACAACTTCTGGAGCAACTTAAAATTGAAAGA...CGGTCTTCGGGCGGCAATTGGTCGGCGACGGCGAAAGGGGCAGGGCCTGCGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CAA 90 bp CCTTTCGCCGTCGCCGACCAATTGCCGCCCGAAGACCGAACCGCTTCAGCGGAGCTGCACATCAGTTACTaGAAGAGCCACACCTCAGAT +
Preference number: 5 (lower is better)
Translates to: PFAVADQLPPEDRTASAELHISY*KSHTSD
Trigger: ATCTGAGGTGTGGCTCTTCAAGTAACTGATGTGCAG...CTCCGCTGAAGCGGTTCGGTCTTCGGGCGGCAATTGGTCGGCGACGGCGAAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS GCA 90 bp CCTGGAGGGCCCCCAAAAGGTTCATCTCTGTGGTATCCATCGTGGTaGTCTCCGTCTAAGGAGCTGGAACGCCCAGATTTGGGCACTCTC +
Preference number: 5 (lower is better)
Translates to: PGGPPKGSSLWYPSW*SPSKELERPDLGTL
Trigger: GAGAGTGCCCAAATCTGGGCGTTCCAGCTCCTTAGACGGAGAGCACCACGATGGATACCACAGAGATGAACCTTTTGGGGGCCCTCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS CCA 90 bp TGGTCCCATTTGTCCCTGGGGTCCAGGAGGCCTAAACTGTCCCTGTaGACCTGGAGGCCCCATTTGAGCCATGTTCATTGGCATCTGCTG +
Preference number: 5 (lower is better)
Translates to: WSHLSLGSRRPKLSL*TWRPHLSHVHWHLL
Trigger: CAGCAGATGCCAATGAACATGGCTCAAATGGGGCCTCCAGGTCCACAGGGACAGTTTAGGCCTCCTGGACCCCAGGGACAAATGGGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS CCA 90 bp ATGTTCATGACCTGGCCCAGGCTCTCTGTTTCCATCCCAGGAATCTaGCTTCCGCCCTCCTTCAAAGCGAGGGAACTCGTCAGGAGTGGG +
Preference number: 5 (lower is better)
Translates to: MFMTWPRLSVSIPGI*LPPSFKARELVRSG
Trigger: CCCACTCCTGACGAGTTCCCTCGCTTTGAAGGAGGGCGGAAGCCAGATTCCTGGGATGGAAACAGAGAGCCTGGGCCAGGTCATGAACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS CCA 90 bp CTGCCTGGAGGGCCCCCAAAAGGTTCATCTCTGTGGTATCCATCGTaGTGCTCTCCGTCTAAGGAGCTGGAACGCCCAGATTTGGGCACT +
Preference number: 5 (lower is better)
Translates to: LPGGPPKGSSLWYPS*CSPSKELERPDLGT
Trigger: AGTGCCCAAATCTGGGCGTTCCAGCTCCTTAGACGGAGAGCACCACGATGGATACCACAGAGATGAACCTTTTGGGGGCCCTCCAGGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CAA 90 bp CTTGGGGACACCACAAAAGTCCGCAGAGCAGGCACCGCGGCACTTCCGCGAGCGCAACTAACCCTTTGGTaGGATGCCAGTCTACACATT +
Preference number: 5 (lower is better)
Translates to: LGDTTKVRRAGTAALPRAQLTLW*DASLHI
Trigger: AATGTGTAGACTGGCATCCAACCAAAGGGTTAGTTG...CGCTCGCGGAAGTGCCGCGGTGCCTGCTCTGCGGACTTTTGTGGTGTCCCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CAA 90 bp CCTTTCGCCGTCGCCGACCAATTGCCGCCCGAAGACCGAACCGCTTCAGCGGAGGAAACAACTAACCCTTaGGTTGGATGCCAGTCTACA +
Preference number: 5 (lower is better)
Translates to: PFAVADQLPPEDRTASAEETTNP*VGCQST
Trigger: TGTAGACTGGCATCCAACCAAAGGGTTAGTTGTTTC...CTCCGCTGAAGCGGTTCGGTCTTCGGGCGGCAATTGGTCGGCGACGGCGAAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CAA 90 bp ACACAAGTGGCCAACATCCACACTGTAGGCTTGCAGGCTACCCGCCCTGAGATTAGACCCTGGTCCGCCTaGGATCCCATGAGGATGAGG +
Preference number: 5 (lower is better)
Translates to: TQVANIHTVGLQATRPEIRPWSA*DPMRMR
Trigger: CCTCATCCTCATGGGATCCAAGGCGGACCAGGGTCT...AATCTCAGGGCGGGTAGCCTGCAAGCCTACAGTGTGGATGTTGGCCACTTGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CAA 90 bp CCTTTCGCCGTCGCCGACCAATTGCCGCCCGAAGACCGAACCGCTTCAGCGGAGAGCAGTCTCTTCATCTaGAAGACCTCATTGAGGGTT +
Preference number: 5 (lower is better)
Translates to: PFAVADQLPPEDRTASAESSLFI*KTSLRV
Trigger: AACCCTCAATGAGGTCTTCAAGATGAAGAGACTGCT...CTCCGCTGAAGCGGTTCGGTCTTCGGGCGGCAATTGGTCGGCGACGGCGAAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS CCA 90 bp CATTTGTCCCTGGGGTCCAGGAGGCCTAAACTGTCCCTGTGGACCTaGAGGCCCCATTTGAGCCATGTTCATTGGCATCTGCTGAGATGG +
Preference number: 5 (lower is better)
Translates to: HLSLGSRRPKLSLWT*RPHLSHVHWHLLRW
Trigger: CCATCTCAGCAGATGCCAATGAACATGGCTCAAATGGGGCCTCCAGGTCCACAGGGACAGTTTAGGCCTCCTGGACCCCAGGGACAAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CAA 90 bp GTGTTTCGGCCTAGCCGCGCTCTACGCACCGGTGTTGCTGCTGCGCGCGCGCAATTTCGAGTCCAGAATTaGCTAGTATGGTCATTTGAG +
Preference number: 5 (lower is better)
Translates to: VFRPSRALRTGVAAARAQFRVQN*LVWSFE
Trigger: CTCAAATGACCATACTAGCAAATTCTGGACTCGAAA...TTGCGCGCGCGCAGCAGCAACACCGGTGCGTAGAGCGCGGCTAGGCCGAAACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CAA 90 bp ACACAAGTGGCCAACATCCACACTGTAGGCTTGCAGGCTACCCGCCCTGAGATTGCCCATAATCATCCCTaGGGGAGCAGGACCCTGGTT +
Preference number: 5 (lower is better)
Translates to: TQVANIHTVGLQATRPEIAHNHP*GSRTLV
Trigger: AACCAGGGTCCTGCTCCCCAAGGGATGATTATGGGC...AATCTCAGGGCGGGTAGCCTGCAAGCCTACAGTGTGGATGTTGGCCACTTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CAA 90 bp ACCACACCCACCCCTGCCTTCCAACTATTAATGCTGGCAGGACTTAGCCAGACCCTGCGACCACGGTACTaGGGGACACCACAAAAGTCC +
Preference number: 5 (lower is better)
Translates to: TTPTPAFQLLMLAGLSQTLRPRY*GTPQKS
Trigger: GGACTTTTGTGGTGTCCCCAAGTACCGTGGTCGCAG...GGTCTGGCTAAGTCCTGCCAGCATTAATAGTTGGAAGGCAGGGGTGGGTGTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CAA 90 bp TCTAAGCAACCATTGAAACTTCCAGCACCAGCGGCCAGGTACTGTGGCTCAGATAGGATGAGGAGGCCCTaGCATTCCTCTGGGACCAGG +
Preference number: 5 (lower is better)
Translates to: SKQPLKLPAPAARYCGSDRMRRP*HSSGTR
Trigger: CCTGGTCCCAGAGGAATGCAAGGGCCTCCTCATCCT...ATCTGAGCCACAGTACCTGGCCGCTGGTGCTGGAAGTTTCAATGGTTGCTTAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CAA 90 bp TCTAAGCAACCATTGAAACTTCCAGCACCAGCGGCCAGGTACTGTGGCTCAGATTGCAATCCCAGCACTTaGGGAGGCCACAGCAGGTGG +
Preference number: 5 (lower is better)
Translates to: SKQPLKLPAPAARYCGSDCNPST*GGHSRW
Trigger: CCACCTGCTGTGGCCTCCCAAAGTGCTGGGATTGCA...ATCTGAGCCACAGTACCTGGCCGCTGGTGCTGGAAGTTTCAATGGTTGCTTAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CAA 90 bp GTGTTTCGGCCTAGCCGCGCTCTACGCACCGGTGTTGCTGCTGCGCGCGCGCAAAACTACCTTAATTTATaGCCAGAAGGTATGAGCCTA +
Preference number: 5 (lower is better)
Translates to: VFRPSRALRTGVAAARAQNYLNL*PEGMSL
Trigger: TAGGCTCATACCTTCTGGCAATAAATTAAGGTAGTT...TTGCGCGCGCGCAGCAGCAACACCGGTGCGTAGAGCGCGGCTAGGCCGAAACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CAA 90 bp TCTAAGCAACCATTGAAACTTCCAGCACCAGCGGCCAGGTACTGTGGCTCAGATCTGAGACATTGGACCTaGTCCTGGAAAAGGCTGGGG +
Preference number: 5 (lower is better)
Translates to: SKQPLKLPAPAARYCGSDLRHWT*SWKRLG
Trigger: CCCCAGCCTTTTCCAGGACAAGGTCCAATGTCTCAG...ATCTGAGCCACAGTACCTGGCCGCTGGTGCTGGAAGTTTCAATGGTTGCTTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CAA 90 bp ACACAAGTGGCCAACATCCACACTGTAGGCTTGCAGGCTACCCGCCCTGAGATTGTTGCTGGAATGGTATaGGCCCTTGAGATGGATGTG +
Preference number: 5 (lower is better)
Translates to: TQVANIHTVGLQATRPEIVAGMV*ALEMDV
Trigger: CACATCCATCTCAAGGGCCAATACCATTCCAGCAAC...AATCTCAGGGCGGGTAGCCTGCAAGCCTACAGTGTGGATGTTGGCCACTTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CAA 90 bp TGCCCAGAAAAGAGTTCAGGGCTACAATGGTGCAGGCTTCCTTTTGTTTCTCTTCCGCGGGAGTCACCTTaGTTGGGGCCAGGTCCTTGT +
Preference number: 5 (lower is better)
Translates to: CPEKSSGLQWCRLPFVSLPRESP*LGPGPC
Trigger: ACAAGGACCTGGCCCCAACAAAGGTGACTCCCGCGG...AAGAGAAACAAAAGGAAGCCTGCACCATTGTAGCCCTGAACTCTTTTCTGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS CCA 90 bp CTACCCCAACATGCCAGAATAACAAAGAACCATCAGACCCTCCACTaGCAAAAAGTCCTTCATGAACAGGATGCCAGGCCACAGCTGTGG +
Preference number: 5 (lower is better)
Translates to: LPQHARITKNHQTLH*QKVLHEQDARPQLW
Trigger: CCACAGCTGTGGCCTGGCATCCTGTTCATGAAGGACTTTTTGCCAGTGGAGGGTCTGATGGTTCTTTGTTATTCTGGCATGTTGGGGTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CAA 90 bp TCTAAGCAACCATTGAAACTTCCAGCACCAGCGGCCAGGTACTGTGGCTCAGATTATGGGCATGAAGTGTaGCAAGACTCTGCCCAGTCT +
Preference number: 5 (lower is better)
Translates to: SKQPLKLPAPAARYCGSDYGHEV*QDSAQS
Trigger: AGACTGGGCAGAGTCTTGCAACACTTCATGCCCATA...ATCTGAGCCACAGTACCTGGCCGCTGGTGCTGGAAGTTTCAATGGTTGCTTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CAA 90 bp ACACAAGTGGCCAACATCCACACTGTAGGCTTGCAGGCTACCCGCCCTGAGATTTTTGAGCCATGTTCATaGGCATCTGCTGAGATGGAT +
Preference number: 5 (lower is better)
Translates to: TQVANIHTVGLQATRPEIFEPCS*ASAEMD
Trigger: ATCCATCTCAGCAGATGCCAATGAACATGGCTCAAA...AATCTCAGGGCGGGTAGCCTGCAAGCCTACAGTGTGGATGTTGGCCACTTGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CAA 90 bp TGCCCAGAAAAGAGTTCAGGGCTACAATGGTGCAGGCTTCCTTTTGTTTCTCTTCTGAGACACAGGACCTaGGATCCCTTGAGACCCTGG +
Preference number: 5 (lower is better)
Translates to: CPEKSSGLQWCRLPFVSLLRHRT*DPLRPW
Trigger: CCAGGGTCTCAAGGGATCCAAGGTCCTGTGTCTCAG...AAGAGAAACAAAAGGAAGCCTGCACCATTGTAGCCCTGAACTCTTTTCTGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CAA 90 bp TGCCCAGAAAAGAGTTCAGGGCTACAATGGTGCAGGCTTCCTTTTGTTTCTCTTATGGATGTGGCCCTCTaGCTGGGTTCTGCTGTCCCT +
Preference number: 5 (lower is better)
Translates to: CPEKSSGLQWCRLPFVSLMDVAL*LGSAVP
Trigger: AGGGACAGCAGAACCCAGCAAGAGGGCCACATCCAT...AAGAGAAACAAAAGGAAGCCTGCACCATTGTAGCCCTGAACTCTTTTCTGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CAA 90 bp CTGTATCTGGTGGAAACCATGGATTTCTACAAGCTCGAATTATTCCTCATTGTAGTTGGGGCCAGGTCCTaGTCCGGGGTTCAGAGGGGG +
Preference number: 5 (lower is better)
Translates to: LYLVETMDFYKLELFLIVVGARS*SGVQRG
Trigger: CCCCCTCTGAACCCCGGACAAGGACCTGGCCCCAAC...TACAATGAGGAATAATTCGAGCTTGTAGAAATCCATGGTTTCCACCAGATACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CAA 90 bp GCCAGAAGGTATGAGCCTAACATTCTGATGAGTCCAGAAAACTACGTTTTGTCACGGGAGTCACCTTTGTaGGGGCCAGGTCCTTGTCCG +
Preference number: 5 (lower is better)
Translates to: ARRYEPNILMSPENYVLSRESPL*GPGPCP
Trigger: CGGACAAGGACCTGGCCCCAACAAAGGTGACTCCCG...TGACAAAACGTAGTTTTCTGGACTCATCAGAATGTTAGGCTCATACCTTCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CAA 90 bp TCTAAAGGGCATGTGACTTTATTTCTGACTAACATCAAGTTCCTCTCCTCATCAGCCGTCGCCGACCAATaGCCGCCCGAAGACCGAACC +
Preference number: 5 (lower is better)
Translates to: SKGHVTLFLTNIKFLSSSAVADQ*PPEDRT
Trigger: GGTTCGGTCTTCGGGCGGCAATTGGTCGGCGACGGC...TGATGAGGAGAGGAACTTGATGTTAGTCAGAAATAAAGTCACATGCCCTTTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CAA 90 bp TGCAGGCTTCCTTTTGTTTCTCTTGGTGAGTCCACAAGAAGTTCTTACATACTGATCCACACTGTAGGCTaGCAGGCTACCCGCCCTGAG +
Preference number: 5 (lower is better)
Translates to: CRLPFVSLGESTRSSYILIHTVG*QATRPE
Trigger: CTCAGGGCGGGTAGCCTGCAAGCCTACAGTGTGGAT...CAGTATGTAAGAACTTCTTGTGGACTCACCAAGAGAAACAAAAGGAAGCCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CAA 90 bp TATGAGTACCCATGGCCCATAGCCAGATACTCCAGTTGGACAGAGGATTTAAGACTGCATCAGGCTGAATaGCCCGCATATCTCTCTGGT +
Preference number: 5 (lower is better)
Translates to: YEYPWPIARYSSWTEDLRLHQAE*PAYLSG
Trigger: ACCAGAGAGATATGCGGGCAATTCAGCCTGATGCAG...TCTTAAATCCTCTGTCCAACTGGAGTATCTGGCTATGGGCCATGGGTACTCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393006.5
CDS-3UTR CAA 90 bp TCTAAGCAACCATTGAAACTTCCAGCACCAGCGGCCAGGTACTGTGGCTCAGATCATTCAGCACCTCATTaGGAGCAGGAATTGGAACTT +
Preference number: 5 (lower is better)
Translates to: SKQPLKLPAPAARYCGSDHSAPH*EQELEL
Trigger: AAGTTCCAATTCCTGCTCCAAATGAGGTGCTGAATG...ATCTGAGCCACAGTACCTGGCCGCTGGTGCTGGAAGTTTCAATGGTTGCTTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CAA 90 bp GCCAGAAGGTATGAGCCTAACATTCTGATGAGTCCAGAAAACTACGTTTTGTCAATGCCTCTGCATTCCTaGGGGCCCATGCATGTCCTG +
Preference number: 5 (lower is better)
Translates to: ARRYEPNILMSPENYVLSMPLHS*GPMHVL
Trigger: CAGGACATGCATGGGCCCCAAGGAATGCAGAGGCAT...TGACAAAACGTAGTTTTCTGGACTCATCAGAATGTTAGGCTCATACCTTCTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CAA 90 bp CATCCAGAAGATTGCATTTTCTCTTCAGAGTACAATTTTCCATCTGTCAGAGCATGGTCCCTGCATACCTaGAGTACCCGGAGGCCCCTG +
Preference number: 5 (lower is better)
Translates to: HPEDCIFSSEYNFPSVRAWSLHT*STRRPL
Trigger: CAGGGGCCTCCGGGTACTCAAGGTATGCAGGGACCA...TGCTCTGACAGATGGAAAATTGTACTCTGAAGAGAAAATGCAATCTTCTGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CAA 90 bp ACACAAGTGGCCAACATCCACACTGTAGGCTTGCAGGCTACCCGCCCTGAGATTTTCCTTTTGTTTCTCTaGGTGAGTCCACAAGAAGTT +
Preference number: 5 (lower is better)
Translates to: TQVANIHTVGLQATRPEIFLLFL*VSPQEV
Trigger: AACTTCTTGTGGACTCACCAAGAGAAACAAAAGGAA...AATCTCAGGGCGGGTAGCCTGCAAGCCTACAGTGTGGATGTTGGCCACTTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CAA 90 bp TGCCCAGAAAAGAGTTCAGGGCTACAATGGTGCAGGCTTCCTTTTGTTTCTCTTCTCGATGTCAGCTTTTaGTGCTGGACTTGGCACACG +
Preference number: 5 (lower is better)
Translates to: CPEKSSGLQWCRLPFVSLLDVSF*CWTWHT
Trigger: CGTGTGCCAAGTCCAGCACAAAAAGCTGACATCGAG...AAGAGAAACAAAAGGAAGCCTGCACCATTGTAGCCCTGAACTCTTTTCTGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS GCA 90 bp GCCTCCTTATGTGCCTGGAACATCTTGACGTTGTTCATGTTCGACTaGCAATATTTCACATATCCTCCGTGGTCTGCTGTCAACATCCAC +
Preference number: 5 (lower is better)
Translates to: ASLCAWNILTLFMFD*QYFTYPPWSAVNIH
Trigger: GTGGATGTTGACAGCAGACCACGGAGGATATGTGAAATATTGGCAGTCGAACATGAACAACGTCAAGATGTTCCAGGCACATAAGGAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322313.9
ENST00000393006.5
ENST00000409658.7
ENST00000436787.5
CDS CCA 90 bp CGTGGTCTGCTGTCAACATCCACATGTCATTATGTGACCACGTCATaGCCCTCACTGGGCTGTCGTGAGCCTGTAATATTGTTTCAAAAT +
Preference number: 5 (lower is better)
Translates to: RGLLSTSTCHYVTTS*PSLGCREPVILFQN
Trigger: ATTTTGAAACAATATTACAGGCTCACGACAGCCCAGTGAGGGCCATGACGTGGTCACATAATGACATGTGGATGTTGACAGCAGACCACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322313.9
ENST00000393006.5
ENST00000409658.7
ENST00000436787.5
CDS CCA 90 bp TCCGTGGGTGAGAAACTGGCCTCTCTAATCGCCTCCTTATGTGCCTaGAACATCTTGACGTTGTTCATGTTCGACTGCCAATATTTCACA +
Preference number: 5 (lower is better)
Translates to: SVGEKLASLIASLCA*NILTLFMFDCQYFT
Trigger: TGTGAAATATTGGCAGTCGAACATGAACAACGTCAAGATGTTCCAGGCACATAAGGAGGCGATTAGAGAGGCCAGTTTCTCACCCACGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322313.9
ENST00000393006.5
ENST00000436787.5
CDS-3UTR CAA 90 bp TGCAGGCTTCCTTTTGTTTCTCTTGGTGAGTCCACAAGAAGTTCTTACATACTGGGGGAAGCTCCCTCGTaGGACATCCAGAAGATTGCA +
Preference number: 5 (lower is better)
Translates to: CRLPFVSLGESTRSSYILGEAPS*DIQKIA
Trigger: TGCAATCTTCTGGATGTCCAACGAGGGAGCTTCCCC...CAGTATGTAAGAACTTCTTGTGGACTCACCAAGAGAAACAAAAGGAAGCCTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CAA 90 bp CTGTATCTGGTGGAAACCATGGATTTCTACAAGCTCGAATTATTCCTCATTGTAAGGACCAGAACTACCTaGTGGTCCAGGTGGCCCTTG +
Preference number: 5 (lower is better)
Translates to: LYLVETMDFYKLELFLIVRTRTT*WSRWPL
Trigger: CAAGGGCCACCTGGACCACAAGGTAGTTCTGGTCCT...TACAATGAGGAATAATTCGAGCTTGTAGAAATCCATGGTTTCCACCAGATACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CAA 90 bp TCTAAGCAACCATTGAAACTTCCAGCACCAGCGGCCAGGTACTGTGGCTCAGATTTTAAGCTATACCAGTaGGGGGTGAGTGAAGAAATA +
Preference number: 5 (lower is better)
Translates to: SKQPLKLPAPAARYCGSDFKLYQ*GVSEEI
Trigger: TATTTCTTCACTCACCCCCAACTGGTATAGCTTAAA...ATCTGAGCCACAGTACCTGGCCGCTGGTGCTGGAAGTTTCAATGGTTGCTTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS TCA 90 bp GTGCAAAATGCGGCAGACAGTACATCTCTAACATATTGCAAAGGCTaGTACCGGGACAACACTACTTCAGAAAGGTGCCAGCAAAATGGT +
Preference number: 5 (lower is better)
Translates to: VQNAADSTSLTYCKG*YRDNTTSERCQQNG
Trigger: ACCATTTTGCTGGCACCTTTCTGAAGTAGTGTTGTCCCGGTATCAGCCTTTGCAATATGTTAGAGATGTACTGTCTGCCGCATTTTGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409658.7
CDS GCA 90 bp TATAGGTGGGACCAGATCATTGTAATAACCTGCATCAGGCTGAATTaGCCGCATATCTCTCTGGTCTCTTTGCCATATTCTGTTCGTCTG +
Preference number: 5 (lower is better)
Translates to: YRWDQIIVITCIRLN*PHISLVSLPYSVRL
Trigger: CAGACGAACAGAATATGGCAAAGAGACCAGAGAGATATGCGGGCAATTCAGCCTGATGCAGGTTATTACAATGATCTGGTCCCACCTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436787.5
CDS-3UTR CAA 90 bp CTGTATCTGGTGGAAACCATGGATTTCTACAAGCTCGAATTATTCCTCATTGTAAGGTCCTCTCATCTCTaGAGGCGGGTGGCCCATAAT +
Preference number: 5 (lower is better)
Translates to: LYLVETMDFYKLELFLIVRSSHL*RRVAHN
Trigger: ATTATGGGCCACCCGCCTCAAGAGATGAGAGGACCT...TACAATGAGGAATAATTCGAGCTTGTAGAAATCCATGGTTTCCACCAGATACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CAA 90 bp TCTAAAGGGCATGTGACTTTATTTCTGACTAACATCAAGTTCCTCTCCTCATCATGCCATGTCCATGCCTaGGAGAGAAGAGGAGCGTTC +
Preference number: 5 (lower is better)
Translates to: SKGHVTLFLTNIKFLSSSCHVHA*ERRGAF
Trigger: GAACGCTCCTCTTCTCTCCAAGGCATGGACATGGCA...TGATGAGGAGAGGAACTTGATGTTAGTCAGAAATAAAGTCACATGCCCTTTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CAA 90 bp CTGTATCTGGTGGAAACCATGGATTTCTACAAGCTCGAATTATTCCTCATTGTAACAACCGTGCATTCCTaGGCAGATGGGATGCGATGG +
Preference number: 5 (lower is better)
Translates to: LYLVETMDFYKLELFLIVTTVHS*ADGMRW
Trigger: CCATCGCATCCCATCTGCCAAGGAATGCACGGTTGT...TACAATGAGGAATAATTCGAGCTTGTAGAAATCCATGGTTTCCACCAGATACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CAA 90 bp TGCCCAGAAAAGAGTTCAGGGCTACAATGGTGCAGGCTTCCTTTTGTTTCTCTTTTTTCTAAGCAACCATaGAAACTTCCAGCACCAGCG +
Preference number: 5 (lower is better)
Translates to: CPEKSSGLQWCRLPFVSLFSKQP*KLPAPA
Trigger: CGCTGGTGCTGGAAGTTTCAATGGTTGCTTAGAAAA...AAGAGAAACAAAAGGAAGCCTGCACCATTGTAGCCCTGAACTCTTTTCTGGGCA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS TCA 90 bp CATGAAGTGTTGCAAGACTCTGCCCAGTCTTGGGATCCCAGAACTTaGTTGGCTGTTGACTATCTTTACTTCCTGAAACAACTAACCCTT +
Preference number: 5 (lower is better)
Translates to: HEVLQDSAQSWDPRT*LAVDYLYFLKQLTL
Trigger: AAGGGTTAGTTGTTTCAGGAAGTAAAGATAGTCAACAGCCAATCAAGTTCTGGGATCCCAAGACTGGGCAGAGTCTTGCAACACTTCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS GCA 90 bp TATAGGTGGGACCAGATCATTGTAATAACCTGCATCAGGCTGAATTaGCCGCATATCTCTCTGGTCTCTTTGCCATATTCTGTTCTCCAA +
Preference number: 5 (lower is better)
Translates to: YRWDQIIVITCIRLN*PHISLVSLPYSVLQ
Trigger: TTGGAGAACAGAATATGGCAAAGAGACCAGAGAGATATGCGGGCAATTCAGCCTGATGCAGGTTATTACAATGATCTGGTCCCACCTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322313.9
ENST00000393006.5
ENST00000408998.1
ENST00000409658.7
CDS CCA 90 bp TTGACGTTGTTCATGTTCGACTGCCAATATTTCACATATCCTCCGTaGTCTGCTGTCAACATCCACATGTCATTATGTGACCACGTCATG +
Preference number: 5 (lower is better)
Translates to: LTLFMFDCQYFTYPP*SAVNIHMSLCDHVM
Trigger: CATGACGTGGTCACATAATGACATGTGGATGTTGACAGCAGACCACGGAGGATATGTGAAATATTGGCAGTCGAACATGAACAACGTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322313.9
ENST00000393006.5
ENST00000409658.7
ENST00000436787.5
CDS-3UTR CAA 90 bp TGCCCAGAAAAGAGTTCAGGGCTACAATGGTGCAGGCTTCCTTTTGTTTCTCTTGCTGTGAGTAGCCAATaGCCATTGAGGTTTAATTTC +
Preference number: 5 (lower is better)
Translates to: CPEKSSGLQWCRLPFVSLAVSSQ*PLRFNF
Trigger: GAAATTAAACCTCAATGGCAATTGGCTACTCACAGC...AAGAGAAACAAAAGGAAGCCTGCACCATTGTAGCCCTGAACTCTTTTCTGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CAA 90 bp TGCCCAGAAAAGAGTTCAGGGCTACAATGGTGCAGGCTTCCTTTTGTTTCTCTTGAGCAGGAATGGGTTTaGCATAAGGAACTTTCTTCT +
Preference number: 5 (lower is better)
Translates to: CPEKSSGLQWCRLPFVSLEQEWV*HKELSS
Trigger: AGAAGAAAGTTCCTTATGCAAAACCCATTCCTGCTC...AAGAGAAACAAAAGGAAGCCTGCACCATTGTAGCCCTGAACTCTTTTCTGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CAA 90 bp TCTAAAGGGCATGTGACTTTATTTCTGACTAACATCAAGTTCCTCTCCTCATCAACCTGGAGGCCCCATTaGAGCCATGTTCATTGGCAT +
Preference number: 5 (lower is better)
Translates to: SKGHVTLFLTNIKFLSSSTWRPH*SHVHWH
Trigger: ATGCCAATGAACATGGCTCAAATGGGGCCTCCAGGT...TGATGAGGAGAGGAACTTGATGTTAGTCAGAAATAAAGTCACATGCCCTTTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CAA 90 bp AAGAAACAAGAGAGATTCTGTGTACCCTTTACCCATTCCTCCATGTTGCAAAACAGGACCCATATGACCTaGAGGACCAGAACTACCTTG +
Preference number: 5 (lower is better)
Translates to: KKQERFCVPFTHSSMLQNRTHMT*RTRTTL
Trigger: CAAGGTAGTTCTGGTCCTCAAGGTCATATGGGTCCT...GTTTTGCAACATGGAGGAATGGGTAAAGGGTACACAGAATCTCTCTTGTTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CAA 90 bp CATCCAGAAGATTGCATTTTCTCTTCAGAGTACAATTTTCCATCTGTCAGAGCAGAATGGTATTGGCCCTaGAGATGGATGTGGCCCTCT +
Preference number: 5 (lower is better)
Translates to: HPEDCIFSSEYNFPSVRAEWYWP*RWMWPS
Trigger: AGAGGGCCACATCCATCTCAAGGGCCAATACCATTC...TGCTCTGACAGATGGAAAATTGTACTCTGAAGAGAAAATGCAATCTTCTGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CAA 90 bp AGTGTCAATATGTTGGGAACAAGTACCCTGGCTACAAGGAAGGAAAAGGAATACCACAGTGTCAATATGTaGGGAACAAGTACCCTGGCT +
Preference number: 5 (lower is better)
Translates to: SVNMLGTSTLATRKEKEYHSVNM*GTSTLA
Trigger: AGCCAGGGTACTTGTTCCCAACATATTGACACTGTG...GTATTCCTTTTCCTTCCTTGTAGCCAGGGTACTTGTTCCCAACATATTGACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409658.7
CDS-3UTR CAA 90 bp GCCAGAAGGTATGAGCCTAACATTCTGATGAGTCCAGAAAACTACGTTTTGTCATGGAACATCTTGACGTaGTTCATGTTCGACTGCCAA +
Preference number: 5 (lower is better)
Translates to: ARRYEPNILMSPENYVLSWNILT*FMFDCQ
Trigger: TTGGCAGTCGAACATGAACAACGTCAAGATGTTCCA...TGACAAAACGTAGTTTTCTGGACTCATCAGAATGTTAGGCTCATACCTTCTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CAA 90 bp CTTGACAATGATCTGCTTACAGCTGCAAAGCTTGAAGAACCCATTCATTACTCCTGGAACATCTTGACGTaGTTCATGTTCGACTGCCAA +
Preference number: 5 (lower is better)
Translates to: LDNDLLTAAKLEEPIHYSWNILT*FMFDCQ
Trigger: TTGGCAGTCGAACATGAACAACGTCAAGATGTTCCA...GGAGTAATGAATGGGTTCTTCAAGCTTTGCAGCTGTAAGCAGATCATTGTCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409658.7
CDS-3UTR CAA 90 bp TCTAAAGGGCATGTGACTTTATTTCTGACTAACATCAAGTTCCTCTCCTCATCAGGGAGGAGGCTGAATTaGCTCAACTTGTTTCTGTGC +
Preference number: 5 (lower is better)
Translates to: SKGHVTLFLTNIKFLSSSGRRLN*LNLFLC
Trigger: GCACAGAAACAAGTTGAGCAAATTCAGCCTCCTCCC...TGATGAGGAGAGGAACTTGATGTTAGTCAGAAATAAAGTCACATGCCCTTTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CAA 90 bp CATCCAGAAGATTGCATTTTCTCTTCAGAGTACAATTTTCCATCTGTCAGAGCAGGTGCAGGCTTCCTTTaGTTTCTCTTGGTGAGTCCA +
Preference number: 5 (lower is better)
Translates to: HPEDCIFSSEYNFPSVRAGAGFL*FLLVSP
Trigger: TGGACTCACCAAGAGAAACAAAAGGAAGCCTGCACC...TGCTCTGACAGATGGAAAATTGTACTCTGAAGAGAAAATGCAATCTTCTGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS GCA 90 bp TGGTATATTGTGTATAAACCTGGCCTCTCTAATCGCCTCCTTATGTaGCTGGAACATCTTGACGTTGTTCATGTTCGACTGCCAATATTT +
Preference number: 5 (lower is better)
Translates to: WYIVYKPGLSNRLLM*LEHLDVVHVRLPIF
Trigger: AAATATTGGCAGTCGAACATGAACAACGTCAAGATGTTCCAGGCACATAAGGAGGCGATTAGAGAGGCCAGGTTTATACACAATATACCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409658.7
CDS CCA 90 bp ATATTGTGTATAAACCTGGCCTCTCTAATCGCCTCCTTATGTGCCTaGAACATCTTGACGTTGTTCATGTTCGACTGCCAATATTTCACA +
Preference number: 5 (lower is better)
Translates to: ILCINLASLIASLCA*NILTLFMFDCQYFT
Trigger: TGTGAAATATTGGCAGTCGAACATGAACAACGTCAAGATGTTCCAGGCACATAAGGAGGCGATTAGAGAGGCCAGGTTTATACACAATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409658.7
CDS-3UTR CAA 90 bp AAGAAACAAGAGAGATTCTGTGTACCCTTTACCCATTCCTCCATGTTGCAAAACAAGCTGTTGCATTGCTaGCTGTTGTGCAAAATCAGG +
Preference number: 5 (lower is better)
Translates to: KKQERFCVPFTHSSMLQNKLLHC*LLCKIR
Trigger: CCTGATTTTGCACAACAGCAAGCAATGCAACAGCTT...GTTTTGCAACATGGAGGAATGGGTAAAGGGTACACAGAATCTCTCTTGTTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CAA 90 bp CAGGGCAGTGTTTTCACAATGTATGTTCCAACAATACAGTGCATAGAATCATGGAAGCTGTTGCATTGCTaGCTGTTGTGCAAAATCAGG +
Preference number: 5 (lower is better)
Translates to: QGSVFTMYVPTIQCIESWKLLHC*LLCKIR
Trigger: CCTGATTTTGCACAACAGCAAGCAATGCAACAGCTT...CCATGATTCTATGCACTGTATTGTTGGAACATACATTGTGAAAACACTGCCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393006.5
CDS-3UTR CAA 90 bp TGCAGGCTTCCTTTTGTTTCTCTTGGTGAGTCCACAAGAAGTTCTTACATACTGGTAAAGAACACTGCCTaGTTCCCCATCAGTAAACAA +
Preference number: 5 (lower is better)
Translates to: CRLPFVSLGESTRSSYILVKNTA*FPISKQ
Trigger: TTGTTTACTGATGGGGAACAAGGCAGTGTTCTTTAC...CAGTATGTAAGAACTTCTTGTGGACTCACCAAGAGAAACAAAAGGAAGCCTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CAA 90 bp GTGTGTGTACATATGTGTGTGTGTATGTTCGGGCACATGTTATTCAACAGTCACCAAGTTCACTTTCAGTaGGCCAGATTAAGGATACAC +
Preference number: 5 (lower is better)
Translates to: VCVHMCVCMFGHMLFNSHQVHFQ*ARLRIH
Trigger: GTGTATCCTTAATCTGGCCAACTGAAAGTGAACTTG...GTGACTGTTGAATAACATGTGCCCGAACATACACACACACATATGTACACACAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393006.5
CDS-3UTR CAA 90 bp ACAGTGTCAATATGTTGGGAACAAGTACCCTGGCTACAAGGAAGGAAAAGGAATAGTCCTAGAGTCTTCTaGACAATGATCTGCTTACAG +
Preference number: 5 (lower is better)
Translates to: TVSICWEQVPWLQGRKRNSPRVF*TMICLQ
Trigger: CTGTAAGCAGATCATTGTCAAGAAGACTCTAGGACT...ATTCCTTTTCCTTCCTTGTAGCCAGGGTACTTGTTCCCAACATATTGACACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409658.7
CDS-3UTR CAA 90 bp AGTGTCAATATGTTGGGAACAAGTACCCTGGCTACAAGGAAGGAAAAGGAATACCTAAGAAGTGTAGCTTaGATACCTCTATCTTGTCGG +
Preference number: 5 (lower is better)
Translates to: SVNMLGTSTLATRKEKEYLRSVA*IPLSCR
Trigger: CCGACAAGATAGAGGTATCAAAGCTACACTTCTTAG...GTATTCCTTTTCCTTCCTTGTAGCCAGGGTACTTGTTCCCAACATATTGACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409658.7
CDS TCA 90 bp AAATGTGGCTCCCTAAACTTTGTCCACCTACTGTTATTCACCTCTTaGCAGAAAGGAAGTAACAACGGCAGTGATGAAAACATGTATCTC +
Preference number: 5 (lower is better)
Translates to: KCGSLNFVHLLLFTS*QKGSNNGSDENMYL
Trigger: GAGATACATGTTTTCATCACTGCCGTTGTTACTTCCTTTCTGTCAAGAGGTGAATAACAGTAGGTGGACAAAGTTTAGGGAGCCACATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393006.5
CDS-3UTR CAA 90 bp GCCAGAAGGTATGAGCCTAACATTCTGATGAGTCCAGAAAACTACGTTTTGTCAGTGTTGCAAAATTGTTaGAGGACCTATTTTGGTCCA +
Preference number: 5 (lower is better)
Translates to: ARRYEPNILMSPENYVLSVLQNC*RTYFGP
Trigger: TGGACCAAAATAGGTCCTCAAACAATTTTGCAACAC...TGACAAAACGTAGTTTTCTGGACTCATCAGAATGTTAGGCTCATACCTTCTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CAA 90 bp TTGATTTGTACCAACTTGTATTTACATGGAAGACCAACAAAGGCTGACCTAAAAGAGAACATCAGCCATTaGTCTGAGACGGGAGATACC +
Preference number: 5 (lower is better)
Translates to: LICTNLYLHGRPTKADLKENISH*SETGDT
Trigger: GGTATCTCCCGTCTCAGACAAATGGCTGATGTTCTC...TTTTAGGTCAGCCTTTGTTGGTCTTCCATGTAAATACAAGTTGGTACAAATCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393006.5
CDS TCA 90 bp AAGAAAAATATTGTGTTTATAGGGTGCAGAAAGTTTCCCAGAAACTaGCAGAGCCCATGCATCTCTGCACCCAGAATACACTTAGAGAAT +
Preference number: 5 (lower is better)
Translates to: KKNIVFIGCRKFPRN*QSPCISAPRIHLEN
Trigger: ATTCTCTAAGTGTATTCTGGGTGCAGAGATGCATGGGCTCTGTCAGTTTCTGGGAAACTTTCTGCACCCTATAAACACAATATTTTTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409658.7
CDS CCA 90 bp CTCTTCCAATTTAATGTCTTCTTTTCTGTCATTCAGCACCTCATTTaGAGCAGGAATTGGAACTTTATTTTGCATCCAAGCCTGCTGGAA +
Preference number: 5 (lower is better)
Translates to: LFQFNVFFSVIQHLI*SRNWNFILHPSLLE
Trigger: TTCCAGCAGGCTTGGATGCAAAATAAAGTTCCAATTCCTGCTCCAAATGAGGTGCTGAATGACAGAAAAGAAGACATTAAATTGGAAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CAA 90 bp AATAAAAACACTGTGCTGCATTATAAACAGGAGAGGGAAGAATCCAGTGAAGAAAAGCTGTTGCATTGCTaGCTGTTGTGCAAAATCAGG +
Preference number: 5 (lower is better)
Translates to: NKNTVLHYKQEREESSEEKLLHC*LLCKIR
Trigger: CCTGATTTTGCACAACAGCAAGCAATGCAACAGCTT...TTCTTCACTGGATTCTTCCCTCTCCTGTTTATAATGCAGCACAGTGTTTTTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409658.7
CDS-3UTR CAA 90 bp AAGAAACAAGAGAGATTCTGTGTACCCTTTACCCATTCCTCCATGTTGCAAAACAGTAGCCAATTGCCATaGAGGTTTAATTTCACTTCC +
Preference number: 5 (lower is better)
Translates to: KKQERFCVPFTHSSMLQNSSQLP*RFNFTS
Trigger: GGAAGTGAAATTAAACCTCAATGGCAATTGGCTACT...GTTTTGCAACATGGAGGAATGGGTAAAGGGTACACAGAATCTCTCTTGTTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS-3UTR CAA 90 bp CATTACTCCGTTAATGTTTGCCACATCCAGTTATCTGTGAGGGTTTTAGTCCTAAGCAATTCTTCAGGCTaGTATTTGGAACTTTTTCCC +
Preference number: 5 (lower is better)
Translates to: HYSVNVCHIQLSVRVLVLSNSSG*YLELFP
Trigger: GGGAAAAAGTTCCAAATACAAGCCTGAAGAATTGCT...TAGGACTAAAACCCTCACAGATAACTGGATGTGGCAAACATTAACGGAGTAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409658.7
CDS-3UTR CAA 90 bp TTGATTTGTACCAACTTGTATTTACATGGAAGACCAACAAAGGCTGACCTAAAATGGAACATCTTGACGTaGTTCATGTTCGACTGCCAA +
Preference number: 5 (lower is better)
Translates to: LICTNLYLHGRPTKADLKWNILT*FMFDCQ
Trigger: TTGGCAGTCGAACATGAACAACGTCAAGATGTTCCA...TTTTAGGTCAGCCTTTGTTGGTCTTCCATGTAAATACAAGTTGGTACAAATCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393006.5
CDS-3UTR CAA 90 bp AGAAAGGCCAGTACCTACACTACGTTAATAATAGATGTATTAGTGCCAGCAGACTTTGCCAGAATCTTCTaGGGTATATTCACAGAAGTT +
Preference number: 5 (lower is better)
Translates to: RKASTYTTLIIDVLVPADFARIF*GIFTEV
Trigger: AACTTCTGTGAATATACCCAAGAAGATTCTGGCAAA...GTCTGCTGGCACTAATACATCTATTATTAACGTAGTGTAGGTACTGGCCTTTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393006.5
CDS-3UTR CAA 90 bp CATTACTCCGTTAATGTTTGCCACATCCAGTTATCTGTGAGGGTTTTAGTCCTAACAGAAAATGGTATATaGTGTATAAACCTGGCCTCT +
Preference number: 5 (lower is better)
Translates to: HYSVNVCHIQLSVRVLVLTENGI*CINLAS
Trigger: AGAGGCCAGGTTTATACACAATATACCATTTTCTGT...TAGGACTAAAACCCTCACAGATAACTGGATGTGGCAAACATTAACGGAGTAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409658.7
CDS-3UTR CAA 90 bp AATAAAAACACTGTGCTGCATTATAAACAGGAGAGGGAAGAATCCAGTGAAGAATACATCTCTAACATATaGCAAAGGCTGATACCGGGA +
Preference number: 5 (lower is better)
Translates to: NKNTVLHYKQEREESSEEYISNI*QRLIPG
Trigger: TCCCGGTATCAGCCTTTGCAATATGTTAGAGATGTA...TTCTTCACTGGATTCTTCCCTCTCCTGTTTATAATGCAGCACAGTGTTTTTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409658.7
CDS-3UTR CAA 90 bp GTTTTGCTGAAACTTACATATCAGGCTGCTGTTAAACTCTTTTACAATAACGTGAATCTGTGGGAGAATTaGGTCACGAGTCTTCTTTTC +
Preference number: 5 (lower is better)
Translates to: VLLKLTYQAAVKLFYNNVNLWEN*VTSLLF
Trigger: GAAAAGAAGACTCGTGACCAAATTCTCCCACAGATT...CACGTTATTGTAAAAGAGTTTAACAGCAGCCTGATATGTAAGTTTCAGCAAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393006.5
CDS-3UTR CAA 90 bp TGGAGGTGTAAGCCAGTATTGTGGTTTTGTGATGATTTAACCACAAATGTCTTCCAACAGAGCAGTTGTTaGAGTTTTCAATCATCAGTA +
Preference number: 5 (lower is better)
Translates to: WRCKPVLWFCDDLTTNVFQQSSC*SFQSSV
Trigger: TACTGATGATTGAAAACTCAAACAACTGCTCTGTTG...GAAGACATTTGTGGTTAAATCATCACAAAACCACAATACTGGCTTACACCTCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409658.7
CDS-3UTR CAA 90 bp TGTAGAAAAGTTTCACATCTTCCTGGCAAGCTATTCCATGAATGTTGCACCTTTAGGTGTAAGCCAGTATaGTGGTTTTGTGATGATTTA +
Preference number: 5 (lower is better)
Translates to: CRKVSHLPGKLFHECCTFRCKPV*WFCDDL
Trigger: TAAATCATCACAAAACCACAATACTGGCTTACACCT...AAAGGTGCAACATTCATGGAATAGCTTGCCAGGAAGATGTGAAACTTTTCTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409658.7
CDS-3UTR CAA 90 bp TCTCATCAAAAGAAGACTTCAACAGAGCAGTTGTTTGAGTTTTCAATCATCAGTTTACAGCTGCAAAGCTaGAAGAACCCATTCATTACT +
Preference number: 5 (lower is better)
Translates to: SHQKKTSTEQLFEFSIISLQLQS*KNPFIT
Trigger: AGTAATGAATGGGTTCTTCAAGCTTTGCAGCTGTAA...ACTGATGATTGAAAACTCAAACAACTGCTCTGTTGAAGTCTTCTTTTGATGAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409658.7
CDS GCA 72 bp CCTCGGGATCCCGGGGGAAACGTTCATCTCCGGGCCTaGGGCCTTCCCATGCCCCCGGAGGGCCTCGGGCTG +
Preference number: 6 (lower is better)
Translates to: PRDPGGNVHLRA*GLPMPPEGLGL
Trigger: CAGCCCGAGGCCCTCCGGGGGCATGGGAAGGCCGCAGGCCCGGAGATGAACGTTTCCCCCGGGATCCCGAGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS GCA 72 bp TCCTGGCCACCCCGGAAAGGCCCCCTCTCGGGCCCATaGTCAGGCCCGCCGCTCTGCTCATGCCGCCTCTCT +
Preference number: 6 (lower is better)
Translates to: SWPPRKGPLSGP*SGPPLCSCRLS
Trigger: AGAGAGGCGGCATGAGCAGAGCGGCGGGCCTGAGCATGGGCCCGAGAGGGGGCCTTTCCGGGGTGGCCAGGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS GCA 72 bp CGCCCCGAGGTCGATTCTCCCAGTTCCTCCAACCTGTaGCCAGGCGCCCGTCCAGGCCCCCAAAGCACGCAA +
Preference number: 6 (lower is better)
Translates to: RPEVDSPSSSNL*PGARPGPQSTQ
Trigger: TTGCGTGCTTTGGGGGCCTGGACGGGCGCCTGGGCACAGGTTGGAGGAACTGGGAGAATCGACCTCGGGGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000408998.1
CDS CAA 90 bp AGGAGGCCCTTGCATTCCTCTGGGACCAGGTGGTCCCTGCATACCTaGAGTACCCGGAGGCCCCTGTGGGCCCAAGTGACCCTGAGGGCC +
Preference number: 6 (lower is better)
Translates to: RRPLHSSGTRWSLHT*STRRPLWAQVTLRA
Trigger: GGCCCTCAGGGTCACTTGGGCCCACAGGGGCCTCCGGGTACTCAAGGTATGCAGGGACCACCTGGTCCCAGAGGAATGCAAGGGCCTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS CCA 72 bp CGGGCCTTGGGGGCCTATGTGACCCTGTGGGCCAGGTaGACCCTGAGGACCCATATGACCTTGAGGACCAGA +
Preference number: 6 (lower is better)
Translates to: RALGAYVTLWAR*TLRTHMTLRTR
Trigger: TCTGGTCCTCAAGGTCATATGGGTCCTCAGGGTCCACCTGGCCCACAGGGTCACATAGGCCCCCAAGGCCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS CCA 72 bp GGAACGCCCAGATTTGGGCACTCTCTGAGCAGGTCCTaGGCCCCCTCGGCCTTTGCCTCCTCGGTCTTCAGA +
Preference number: 6 (lower is better)
Translates to: GTPRFGHSLSRS*APSAFASSVFR
Trigger: TCTGAAGACCGAGGAGGCAAAGGCCGAGGGGGCCCAGGACCTGCTCAGAGAGTGCCCAAATCTGGGCGTTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS CAA 72 bp TCTCATCTCTTGAGGCGGGTGGCCCATAATCATCCCTaGGGGAGCAGGACCCTGGTTCTCCCGGGGGCCTGG +
Preference number: 6 (lower is better)
Translates to: SHLLRRVAHNHP*GSRTLVLPGAW
Trigger: CCAGGCCCCCGGGAGAACCAGGGTCCTGCTCCCCAAGGGATGATTATGGGCCACCCGCCTCAAGAGATGAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS CAA 72 bp CATGCCGCCTCTCTGACATCGGGCCCATGTGATGGTTaGGAGGGCCGCGGGAGTCACCTTTGTTGGGGCCAG +
Preference number: 6 (lower is better)
Translates to: HAASLTSGPCDG*EGRGSHLCWGQ
Trigger: CTGGCCCCAACAAAGGTGACTCCCGCGGCCCTCCAAACCATCACATGGGCCCGATGTCAGAGAGGCGGCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS CAA 90 bp GCTCCCAGTCAGGGCCTTAGTTCTAACCATGGCCGCTTTTCCCGGTaGGCCTCCAGCCTCCAGCCCCCTCCCATAAGTCTCGAACCTGCC +
Preference number: 6 (lower is better)
Translates to: APSQGLSSNHGRFSR*ASSLQPPPISLEPA
Trigger: GGCAGGTTCGAGACTTATGGGAGGGGGCTGGAGGCTGGAGGCCAACCGGGAAAAGCGGCCATGGTTAGAACTAAGGCCCTGACTGGGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000408998.1
CDS TCA 72 bp TCCTTCCTCCTCGTGGGGTACCCCGACCTCGACCTCTaGGATCTCGTCCTCGGGCCGCTTCCTCAGAAGCAT +
Preference number: 6 (lower is better)
Translates to: SFLLVGYPDLDL*DLVLGPLPQKH
Trigger: ATGCTTCTGAGGAAGCGGCCCGAGGACGAGATCTCAGAGGTCGAGGTCGGGGTACCCCACGAGGAGGAAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS TCA 72 bp CAGTTCCAGCTTCTACCGACCCCTTCCACCACCCCGTaGAGCTCCTCGCCTCGGCGGGCCAGAGTTCATGTT +
Preference number: 6 (lower is better)
Translates to: QFQLLPTPSTTP*SSSPRRARVHV
Trigger: AACATGAACTCTGGCCCGCCGAGGCGAGGAGCTTCACGGGGTGGTGGAAGGGGTCGGTAGAAGCTGGAACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS CAA 72 bp TTGCATTCCTCTGGGACCAGGTGGTCCCTGCATACCTaGAGTACCCGGAGGCCCCTGTGGGCCCAAGTGACC +
Preference number: 6 (lower is better)
Translates to: LHSSGTRWSLHT*STRRPLWAQVT
Trigger: GGTCACTTGGGCCCACAGGGGCCTCCGGGTACTCAAGGTATGCAGGGACCACCTGGTCCCAGAGGAATGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS CAA 90 bp CAGGACCCTGGTTCTCCCGGGGGCCTGGAGGCCCCTGCATTCCTCTaGGATTCAATCCCATCAGAGGTCCCTGAGACACAGGACCTTGGA +
Preference number: 6 (lower is better)
Translates to: QDPGSPGGLEAPAFL*DSIPSEVPETQDLG
Trigger: TCCAAGGTCCTGTGTCTCAGGGACCTCTGATGGGATTGAATCCAAGAGGAATGCAGGGGCCTCCAGGCCCCCGGGAGAACCAGGGTCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS TCA 72 bp CTCTGCTCATGCCGCCTCTCTGACATCGGGCCCATGTaGTGGTTTGGAGGGCCGCGGGAGTCACCTTTGTTG +
Preference number: 6 (lower is better)
Translates to: LCSCRLSDIGPM*WFGGPRESPLL
Trigger: CAACAAAGGTGACTCCCGCGGCCCTCCAAACCATCACATGGGCCCGATGTCAGAGAGGCGGCATGAGCAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS CCA 72 bp TCCCTGAGACACAGGACCTTGGATCCCTTGAGACCCTaGTCCGCCTTGGATCCCATGAGGATGAGGAGGCCC +
Preference number: 6 (lower is better)
Translates to: SLRHRTLDPLRP*SALDPMRMRRP
Trigger: GGGCCTCCTCATCCTCATGGGATCCAAGGCGGACCAGGGTCTCAAGGGATCCAAGGTCCTGTGTCTCAGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS CCA 72 bp GTTCTCCCGGGGGCCTGGAGGCCCCTGCATTCCTCTTaGATTCAATCCCATCAGAGGTCCCTGAGACACAGG +
Preference number: 6 (lower is better)
Translates to: VLPGAWRPLHSS*IQSHQRSLRHR
Trigger: CCTGTGTCTCAGGGACCTCTGATGGGATTGAATCCAAGAGGAATGCAGGGGCCTCCAGGCCCCCGGGAGAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS CAA 72 bp TGGTCCGCCTTGGATCCCATGAGGATGAGGAGGCCCTaGCATTCCTCTGGGACCAGGTGGTCCCTGCATACC +
Preference number: 6 (lower is better)
Translates to: WSALDPMRMRRP*HSSGTRWSLHT
Trigger: GGTATGCAGGGACCACCTGGTCCCAGAGGAATGCAAGGGCCTCCTCATCCTCATGGGATCCAAGGCGGACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS CAA 72 bp GGTTCTCCCGGGGGCCTGGAGGCCCCTGCATTCCTCTaGGATTCAATCCCATCAGAGGTCCCTGAGACACAG +
Preference number: 6 (lower is better)
Translates to: GSPGGLEAPAFL*DSIPSEVPETQ
Trigger: CTGTGTCTCAGGGACCTCTGATGGGATTGAATCCAAGAGGAATGCAGGGGCCTCCAGGCCCCCGGGAGAACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS TCA 72 bp CAAAGCGCTTGTCAGGGTGGAAGTCATCTGGTCTGCTaGAGTCATCGGGGAAGTCTGGGTGAGGGCCACGCC +
Preference number: 6 (lower is better)
Translates to: QSACQGGSHLVC*SHRGSLGEGHA
Trigger: GGCGTGGCCCTCACCCAGACTTCCCCGATGACTTCAGCAGACCAGATGACTTCCACCCTGACAAGCGCTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS GCA 72 bp GTCCCAGCATTGATCCTTGGGGTGGAGGCCCCTGCATaGCTCGGATCTCCTGAGGACCTCTCATTTCCTGAG +
Preference number: 6 (lower is better)
Translates to: VPALILGVEAPA*LGSPEDLSFPE
Trigger: CTCAGGAAATGAGAGGTCCTCAGGAGATCCGAGGCATGCAGGGGCCTCCACCCCAAGGATCAATGCTGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS CCA 72 bp GGATCCCATGAGGATGAGGAGGCCCTTGCATTCCTCTaGGACCAGGTGGTCCCTGCATACCTTGAGTACCCG +
Preference number: 6 (lower is better)
Translates to: GSHEDEEALAFL*DQVVPAYLEYP
Trigger: CGGGTACTCAAGGTATGCAGGGACCACCTGGTCCCAGAGGAATGCAAGGGCCTCCTCATCCTCATGGGATCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS CAA 72 bp ACCTCCCTGATGCAGTGGAGGACCTTGTGGTCCCATTaGTCCCTGGGGTCCAGGAGGCCTAAACTGTCCCTG +
Preference number: 6 (lower is better)
Translates to: TSLMQWRTLWSH*SLGSRRPKLSL
Trigger: CAGGGACAGTTTAGGCCTCCTGGACCCCAGGGACAAATGGGACCACAAGGTCCTCCACTGCATCAGGGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS CAA 90 bp TTGAGACCCTGGTCCGCCTTGGATCCCATGAGGATGAGGAGGCCCTaGCATTCCTCTGGGACCAGGTGGTCCCTGCATACCTTGAGTACC +
Preference number: 6 (lower is better)
Translates to: LRPWSALDPMRMRRP*HSSGTRWSLHTLST
Trigger: GGTACTCAAGGTATGCAGGGACCACCTGGTCCCAGAGGAATGCAAGGGCCTCCTCATCCTCATGGGATCCAAGGCGGACCAGGGTCTCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS CAA 90 bp GGGTCCAGGAGGCCTAAACTGTCCCTGTGGACCTGGAGGCCCCATTaGAGCCATGTTCATTGGCATCTGCTGAGATGGATGGGGCTGTTG +
Preference number: 6 (lower is better)
Translates to: GSRRPKLSLWTWRPH*SHVHWHLLRWMGLL
Trigger: CAACAGCCCCATCCATCTCAGCAGATGCCAATGAACATGGCTCAAATGGGGCCTCCAGGTCCACAGGGACAGTTTAGGCCTCCTGGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS CAA 90 bp ATTCAATCCCATCAGAGGTCCCTGAGACACAGGACCTTGGATCCCTaGAGACCCTGGTCCGCCTTGGATCCCATGAGGATGAGGAGGCCC +
Preference number: 6 (lower is better)
Translates to: IQSHQRSLRHRTLDP*RPWSALDPMRMRRP
Trigger: GGGCCTCCTCATCCTCATGGGATCCAAGGCGGACCAGGGTCTCAAGGGATCCAAGGTCCTGTGTCTCAGGGACCTCTGATGGGATTGAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS GCA 72 bp CCATGTCCATGCCTTGGAGAGAAGAGGAGCGTTCTCTaGTGGCTGGGGAATGACCGTCGTGAGGGGGATGAT +
Preference number: 6 (lower is better)
Translates to: PCPCLGEKRSVL*WLGNDRREGDD
Trigger: ATCATCCCCCTCACGACGGTCATTCCCCAGCCAGCAGAGAACGCTCCTCTTCTCTCCAAGGCATGGACATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS CCA 72 bp CTGGGGTCCAGGAGGCCTAAACTGTCCCTGTGGACCTaGAGGCCCCATTTGAGCCATGTTCATTGGCATCTG +
Preference number: 6 (lower is better)
Translates to: LGSRRPKLSLWT*RPHLSHVHWHL
Trigger: CAGATGCCAATGAACATGGCTCAAATGGGGCCTCCAGGTCCACAGGGACAGTTTAGGCCTCCTGGACCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS CCA 72 bp TCCGCCCTCCTTCAAAGCGAGGGAACTCGTCAGGAGTaGGAAGTAAACCCTTCCTTCCTCCTCGTGGGGTAC +
Preference number: 6 (lower is better)
Translates to: SALLQSEGTRQE*EVNPSFLLVGY
Trigger: GTACCCCACGAGGAGGAAGGAAGGGTTTACTTCCCACTCCTGACGAGTTCCCTCGCTTTGAAGGAGGGCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS CCA 72 bp TGTCCATGCCTTGGAGAGAAGAGGAGCGTTCTCTGCTaGCTGGGGAATGACCGTCGTGAGGGGGATGATCAG +
Preference number: 6 (lower is better)
Translates to: CPCLGEKRSVLC*LGNDRREGDDQ
Trigger: CTGATCATCCCCCTCACGACGGTCATTCCCCAGCCAGCAGAGAACGCTCCTCTTCTCTCCAAGGCATGGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS CCA 72 bp CCACTGCCTGGAGGGCCCCCAAAAGGTTCATCTCTGTaGTATCCATCGTGGTGCTCTCCGTCTAAGGAGCTG +
Preference number: 6 (lower is better)
Translates to: PLPGGPPKGSSL*YPSWCSPSKEL
Trigger: CAGCTCCTTAGACGGAGAGCACCACGATGGATACCACAGAGATGAACCTTTTGGGGGCCCTCCAGGCAGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS CAA 90 bp CATATGACCTTGAGGACCAGAACTACCTTGTGGTCCAGGTGGCCCTaGAGGTCCCAAAGGGCCATGAGGTCCAGGATGCCTCTGCATTCC +
Preference number: 6 (lower is better)
Translates to: HMTLRTRTTLWSRWP*RSQRAMRSRMPLHS
Trigger: GGAATGCAGAGGCATCCTGGACCTCATGGCCCTTTGGGACCTCAAGGGCCACCTGGACCACAAGGTAGTTCTGGTCCTCAAGGTCATATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS CCA 72 bp GGGCCCCCAAAAGGTTCATCTCTGTGGTATCCATCGTaGTGCTCTCCGTCTAAGGAGCTGGAACGCCCAGAT +
Preference number: 6 (lower is better)
Translates to: GPPKGSSLWYPS*CSPSKELERPD
Trigger: ATCTGGGCGTTCCAGCTCCTTAGACGGAGAGCACCACGATGGATACCACAGAGATGAACCTTTTGGGGGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS CAA 72 bp ATTCAATCCCATCAGAGGTCCCTGAGACACAGGACCTaGGATCCCTTGAGACCCTGGTCCGCCTTGGATCCC +
Preference number: 6 (lower is better)
Translates to: IQSHQRSLRHRT*DPLRPWSALDP
Trigger: GGGATCCAAGGCGGACCAGGGTCTCAAGGGATCCAAGGTCCTGTGTCTCAGGGACCTCTGATGGGATTGAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS CAA 90 bp TCCTCTTGGATTCAATCCCATCAGAGGTCCCTGAGACACAGGACCTaGGATCCCTTGAGACCCTGGTCCGCCTTGGATCCCATGAGGATG +
Preference number: 6 (lower is better)
Translates to: SSWIQSHQRSLRHRT*DPLRPWSALDPMRM
Trigger: CATCCTCATGGGATCCAAGGCGGACCAGGGTCTCAAGGGATCCAAGGTCCTGTGTCTCAGGGACCTCTGATGGGATTGAATCCAAGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS TCA 72 bp TCCGTGGTCTGCTGTCAACATCCACATGTCATTATGTaGCCACGTCATGGCCCTCACTGGGCTGTCGTGAGC +
Preference number: 6 (lower is better)
Translates to: SVVCCQHPHVIM*PRHGPHWAVVS
Trigger: GCTCACGACAGCCCAGTGAGGGCCATGACGTGGTCACATAATGACATGTGGATGTTGACAGCAGACCACGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322313.9
ENST00000393006.5
ENST00000409658.7
ENST00000436787.5
CDS CCA 72 bp TCTTCTGAAACTTTCTTCTCTGCGCCCTCGAAAACGTaGGTCCTCGGGATCCCGGGGGAAACGTTCATCTCC +
Preference number: 6 (lower is better)
Translates to: SSETFFSAPSKT*VLGIPGETFIS
Trigger: GGAGATGAACGTTTCCCCCGGGATCCCGAGGACCCACGTTTTCGAGGGCGCAGAGAAGAAAGTTTCAGAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS CAA 72 bp CGCCCCTCAAATTCACGTAACCGGTGGCCAAAGCGCTaGTCAGGGTGGAAGTCATCTGGTCTGCTGAAGTCA +
Preference number: 6 (lower is better)
Translates to: RPSNSRNRWPKR*SGWKSSGLLKS
Trigger: TGACTTCAGCAGACCAGATGACTTCCACCCTGACAAGCGCTTTGGCCACCGGTTACGTGAATTTGAGGGGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS GCA 72 bp CCCCCAAAAGGTTCATCTCTGTGGTATCCATCGTGGTaGTCTCCGTCTAAGGAGCTGGAACGCCCAGATTTG +
Preference number: 6 (lower is better)
Translates to: PPKGSSLWYPSW*SPSKELERPDL
Trigger: CAAATCTGGGCGTTCCAGCTCCTTAGACGGAGAGCACCACGATGGATACCACAGAGATGAACCTTTTGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS CCA 72 bp CGTTTTCTGTTGCTGGAATGGTATTGGCCCTTGAGATaGATGTGGCCCTCTTGCTGGGTTCTGCTGTCCCTG +
Preference number: 6 (lower is better)
Translates to: RFLLLEWYWPLR*MWPSCWVLLSL
Trigger: CAGGGACAGCAGAACCCAGCAAGAGGGCCACATCCATCTCAAGGGCCAATACCATTCCAGCAACAGAAAACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS CAA 72 bp CAGAGGCGTTTTCTGTTGCTGGAATGGTATTGGCCCTaGAGATGGATGTGGCCCTCTTGCTGGGTTCTGCTG +
Preference number: 6 (lower is better)
Translates to: QRRFLLLEWYWP*RWMWPSCWVLL
Trigger: CAGCAGAACCCAGCAAGAGGGCCACATCCATCTCAAGGGCCAATACCATTCCAGCAACAGAAAACGCCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS TCA 72 bp GGTCCGAGGAGAGGGGTGCCAGATGAGGGAGGAGGCTaGATTTGCTCAACTTGTTTCTGTGCAAGTCTTTCA +
Preference number: 6 (lower is better)
Translates to: GPRRGVPDEGGG*ICSTCFCASLS
Trigger: TGAAAGACTTGCACAGAAACAAGTTGAGCAAATTCAGCCTCCTCCCTCATCTGGCACCCCTCTCCTCGGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS CCA 72 bp CTGTCAACATCCACATGTCATTATGTGACCACGTCATaGCCCTCACTGGGCTGTCGTGAGCCTGTAATATTG +
Preference number: 6 (lower is better)
Translates to: LSTSTCHYVTTS*PSLGCREPVIL
Trigger: CAATATTACAGGCTCACGACAGCCCAGTGAGGGCCATGACGTGGTCACATAATGACATGTGGATGTTGACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322313.9
ENST00000393006.5
ENST00000409658.7
ENST00000436787.5
CDS TCA 72 bp GCGGCAGACAGTACATCTCTAACATATTGCAAAGGCTaGTACCGGGACAACACTACTTCAGAAAGGTGCCAG +
Preference number: 6 (lower is better)
Translates to: AADSTSLTYCKG*YRDNTTSERCQ
Trigger: CTGGCACCTTTCTGAAGTAGTGTTGTCCCGGTATCAGCCTTTGCAATATGTTAGAGATGTACTGTCTGCCGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409658.7
CDS CCA 72 bp GAGAAACTGGCCTCTCTAATCGCCTCCTTATGTGCCTaGAACATCTTGACGTTGTTCATGTTCGACTGCCAA +
Preference number: 6 (lower is better)
Translates to: EKLASLIASLCA*NILTLFMFDCQ
Trigger: TTGGCAGTCGAACATGAACAACGTCAAGATGTTCCAGGCACATAAGGAGGCGATTAGAGAGGCCAGTTTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322313.9
ENST00000393006.5
ENST00000436787.5
CDS CCA 72 bp CATGCCAGAATAACAAAGAACCATCAGACCCTCCACTaGCAAAAAGTCCTTCATGAACAGGATGCCAGGCCA +
Preference number: 6 (lower is better)
Translates to: HARITKNHQTLH*QKVLHEQDARP
Trigger: TGGCCTGGCATCCTGTTCATGAAGGACTTTTTGCCAGTGGAGGGTCTGATGGTTCTTTGTTATTCTGGCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS CAA 90 bp CTGGCCTCTCTAATCGCCTCCTTATGTGCCTGGAACATCTTGACGTaGTTCATGTTCGACTGCCAATATTTCACATATCCTCCGTGGTCT +
Preference number: 6 (lower is better)
Translates to: LASLIASLCAWNILT*FMFDCQYFTYPPWS
Trigger: AGACCACGGAGGATATGTGAAATATTGGCAGTCGAACATGAACAACGTCAAGATGTTCCAGGCACATAAGGAGGCGATTAGAGAGGCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322313.9
ENST00000393006.5
ENST00000409658.7
ENST00000436787.5
CDS CAA 90 bp GAGAAACTGGCCTCTCTAATCGCCTCCTTATGTGCCTGGAACATCTaGACGTTGTTCATGTTCGACTGCCAATATTTCACATATCCTCCG +
Preference number: 6 (lower is better)
Translates to: EKLASLIASLCAWNI*TLFMFDCQYFTYPP
Trigger: CGGAGGATATGTGAAATATTGGCAGTCGAACATGAACAACGTCAAGATGTTCCAGGCACATAAGGAGGCGATTAGAGAGGCCAGTTTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322313.9
ENST00000393006.5
ENST00000436787.5
CDS CAA 90 bp CATTTGAGCCATGTTCATTGGCATCTGCTGAGATGGATGGGGCTGTaGAAAACCTTGAGGAATCTGAGACATTGGACCTTGTCCTGGAAA +
Preference number: 6 (lower is better)
Translates to: HLSHVHWHLLRWMGL*KTLRNLRHWTLSWK
Trigger: TTTCCAGGACAAGGTCCAATGTCTCAGATTCCTCAAGGTTTTCAACAGCCCCATCCATCTCAGCAGATGCCAATGAACATGGCTCAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322313.9
CDS GCA 72 bp CATTCCTATAGGTGGGACCAGATCATTGTAATAACCTaGATCAGGCTGAATTGCCCGCATATCTCTCTGGTC +
Preference number: 6 (lower is better)
Translates to: HSYRWDQIIVIT*IRLNCPHISLV
Trigger: GACCAGAGAGATATGCGGGCAATTCAGCCTGATGCAGGTTATTACAATGATCTGGTCCCACCTATAGGAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322313.9
ENST00000393006.5
ENST00000408998.1
ENST00000409658.7
ENST00000436787.5
CDS GCA 72 bp TGTGCCTGGAACATCTTGACGTTGTTCATGTTCGACTaGCAATATTTCACATATCCTCCGTGGTCTGCTGTC +
Preference number: 6 (lower is better)
Translates to: CAWNILTLFMFD*QYFTYPPWSAV
Trigger: GACAGCAGACCACGGAGGATATGTGAAATATTGGCAGTCGAACATGAACAACGTCAAGATGTTCCAGGCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322313.9
ENST00000393006.5
ENST00000409658.7
ENST00000436787.5
CDS GCA 72 bp GTGTATAAACCTGGCCTCTCTAATCGCCTCCTTATGTaGCTGGAACATCTTGACGTTGTTCATGTTCGACTG +
Preference number: 6 (lower is better)
Translates to: VYKPGLSNRLLM*LEHLDVVHVRL
Trigger: CAGTCGAACATGAACAACGTCAAGATGTTCCAGGCACATAAGGAGGCGATTAGAGAGGCCAGGTTTATACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409658.7
CDS CCA 72 bp ATAAACCTGGCCTCTCTAATCGCCTCCTTATGTGCCTaGAACATCTTGACGTTGTTCATGTTCGACTGCCAA +
Preference number: 6 (lower is better)
Translates to: INLASLIASLCA*NILTLFMFDCQ
Trigger: TTGGCAGTCGAACATGAACAACGTCAAGATGTTCCAGGCACATAAGGAGGCGATTAGAGAGGCCAGGTTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409658.7
CDS CAA 90 bp TTGGCTGTTGACTATCTTTACTTCCTGAAACAACTAACCCTTTGGTaGGATGCCAGTCTACACATTTCACATCAGCACCATGCCCTCGGA +
Preference number: 6 (lower is better)
Translates to: LAVDYLYFLKQLTLW*DASLHISHQHHALG
Trigger: TCCGAGGGCATGGTGCTGATGTGAAATGTGTAGACTGGCATCCAACCAAAGGGTTAGTTGTTTCAGGAAGTAAAGATAGTCAACAGCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322313.9
ENST00000436787.5
CDS CAA 90 bp GAGAAAACCAGTGCAAAATGCGGCAGACAGTACATCTCTAACATATaGCAAAGGCTGATACCGGGACAACACTACTTCAGAAAGGTGCCA +
Preference number: 6 (lower is better)
Translates to: EKTSAKCGRQYISNI*QRLIPGQHYFRKVP
Trigger: TGGCACCTTTCTGAAGTAGTGTTGTCCCGGTATCAGCCTTTGCAATATGTTAGAGATGTACTGTCTGCCGCATTTTGCACTGGTTTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409658.7
CDS TCA 72 bp ATTGTGTTTATAGGGTGCAGAAAGTTTCCCAGAAACTaGCAGAGCCCATGCATCTCTGCACCCAGAATACAC +
Preference number: 6 (lower is better)
Translates to: IVFIGCRKFPRN*QSPCISAPRIH
Trigger: GTGTATTCTGGGTGCAGAGATGCATGGGCTCTGTCAGTTTCTGGGAAACTTTCTGCACCCTATAAACACAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409658.7
CDS CAA 72 bp GGACCAGATCATTGTAATAACCTGCATCAGGCTGAATaGCCCGCATATCTCTCTGGTCTCTTTGCCATATTC +
Preference number: 6 (lower is better)
Translates to: GPDHCNNLHQAE*PAYLSGLFAIF
Trigger: GAATATGGCAAAGAGACCAGAGAGATATGCGGGCAATTCAGCCTGATGCAGGTTATTACAATGATCTGGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322313.9
ENST00000393006.5
ENST00000408998.1
ENST00000409658.7
ENST00000436787.5
CDS CAA 72 bp GCCTCTCTAATCGCCTCCTTATGTGCCTGGAACATCTaGACGTTGTTCATGTTCGACTGCCAATATTTCACA +
Preference number: 6 (lower is better)
Translates to: ASLIASLCAWNI*TLFMFDCQYFT
Trigger: TGTGAAATATTGGCAGTCGAACATGAACAACGTCAAGATGTTCCAGGCACATAAGGAGGCGATTAGAGAGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322313.9
ENST00000393006.5
ENST00000409658.7
ENST00000436787.5
CDS TCA 72 bp TTGCAAGACTCTGCCCAGTCTTGGGATCCCAGAACTTaGTTGGCTGTTGACTATCTTTACTTCCTGAAACAA +
Preference number: 6 (lower is better)
Translates to: LQDSAQSWDPRT*LAVDYLYFLKQ
Trigger: TTGTTTCAGGAAGTAAAGATAGTCAACAGCCAATCAAGTTCTGGGATCCCAAGACTGGGCAGAGTCTTGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322313.9
ENST00000436787.5
CDS CAA 72 bp AGTGCAAAATGCGGCAGACAGTACATCTCTAACATATaGCAAAGGCTGATACCGGGACAACACTACTTCAGA +
Preference number: 6 (lower is better)
Translates to: SAKCGRQYISNI*QRLIPGQHYFR
Trigger: TCTGAAGTAGTGTTGTCCCGGTATCAGCCTTTGCAATATGTTAGAGATGTACTGTCTGCCGCATTTTGCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409658.7
CDS CCA 72 bp TTCATGTTCGACTGCCAATATTTCACATATCCTCCGTaGTCTGCTGTCAACATCCACATGTCATTATGTGAC +
Preference number: 6 (lower is better)
Translates to: FMFDCQYFTYPP*SAVNIHMSLCD
Trigger: GTCACATAATGACATGTGGATGTTGACAGCAGACCACGGAGGATATGTGAAATATTGGCAGTCGAACATGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322313.9
ENST00000393006.5
ENST00000409658.7
ENST00000436787.5
CDS CAA 72 bp CTAATCGCCTCCTTATGTGCCTGGAACATCTTGACGTaGTTCATGTTCGACTGCCAATATTTCACATATCCT +
Preference number: 6 (lower is better)
Translates to: LIASLCAWNILT*FMFDCQYFTYP
Trigger: AGGATATGTGAAATATTGGCAGTCGAACATGAACAACGTCAAGATGTTCCAGGCACATAAGGAGGCGATTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322313.9
ENST00000393006.5
ENST00000409658.7
ENST00000436787.5
CDS TCA 72 bp TCCCTAAACTTTGTCCACCTACTGTTATTCACCTCTTaGCAGAAAGGAAGTAACAACGGCAGTGATGAAAAC +
Preference number: 6 (lower is better)
Translates to: SLNFVHLLLFTS*QKGSNNGSDEN
Trigger: GTTTTCATCACTGCCGTTGTTACTTCCTTTCTGTCAAGAGGTGAATAACAGTAGGTGGACAAAGTTTAGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393006.5
CDS CAA 90 bp GAGAATAATTTAACCATGACAATAGGGACTACAGAAAATGGTATATaGTGTATAAACCTGGCCTCTCTAATCGCCTCCTTATGTGCCTGG +
Preference number: 6 (lower is better)
Translates to: ENNLTMTIGTTENGI*CINLASLIASLCAW
Trigger: CCAGGCACATAAGGAGGCGATTAGAGAGGCCAGGTTTATACACAATATACCATTTTCTGTAGTCCCTATTGTCATGGTTAAATTATTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409658.7
CDS CAA 72 bp ATCAGGCTGAATTGCCCGCATATCTCTCTGGTCTCTTaGCCATATTCTGTTCTCCAAATACTTAATTACAGA +
Preference number: 6 (lower is better)
Translates to: IRLNCPHISLVS*PYSVLQILNYR
Trigger: TCTGTAATTAAGTATTTGGAGAACAGAATATGGCAAAGAGACCAGAGAGATATGCGGGCAATTCAGCCTGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322313.9
ENST00000393006.5
ENST00000408998.1
ENST00000409658.7
CDS CAA 72 bp TTAACCATGACAATAGGGACTACAGAAAATGGTATATaGTGTATAAACCTGGCCTCTCTAATCGCCTCCTTA +
Preference number: 6 (lower is better)
Translates to: LTMTIGTTENGI*CINLASLIASL
Trigger: TAAGGAGGCGATTAGAGAGGCCAGGTTTATACACAATATACCATTTTCTGTAGTCCCTATTGTCATGGTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409658.7
CDS TCA 72 bp TCTTTTAGGTTTCTGATATCAAAAAGTTTACAGAGATaGTCACGTGATGCTGTGAGTAGCCAATTGCCATTG +
Preference number: 6 (lower is better)
Translates to: SFRFLISKSLQR*SRDAVSSQLPL
Trigger: CAATGGCAATTGGCTACTCACAGCATCACGTGATCATCTCTGTAAACTTTTTGATATCAGAAACCTAAAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322313.9