RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for WDR3 (Homo sapiens)

Ensembl gene IDs: ENSG00000065183

Ensembl transcript IDs: ENST00000349139.6, ENST00000369441.7, ENST00000471680.1

Found 362 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCCCATACCTCAGTCCGGTGGCCAACCATTGTTTTAAAGCAGTGCTaGGTATCAAGGTCCCACCATTTCACCATGGTATCTTTCCCACTA +
Preference number: 1 (lower is better)
Translates to: PHTSVRWPTIVLKQC*VSRSHHFTMVSFPL
Trigger: TAGTGGGAAAGATACCATGGTGAAATGGTGGGACCTTGATACTCAGCACTGCTTTAAAACAATGGTTGGCCACCGGACTGAGGTATGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369441.7
3UTR CCA 90 bp GGGAACAACTGGATGTGTAAAAGTACCATTAGAAGTCTACCTGAATaGGCCATGTGTGAGGACAAGAACTGGGAGTGGGGGAACAGTCAA +
Preference number: 1 (lower is better)
Translates to: GNNWMCKSTIRSLPE*AMCEDKNWEWGNSQ
Trigger: TTGACTGTTCCCCCACTCCCAGTTCTTGTCCTCACACATGGCCCATTCAGGTAGACTTCTAATGGTACTTTTACACATCCAGTTGTTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000349139.6
3UTR CCA 90 bp TGTCGACTGCAAGGTTTACAACTCTGTCTCTTCCTTCCCGCATTATaGAACCAGCTTTTCTGCATGAAAGGATTCGATCCTCAGGGGCTT +
Preference number: 1 (lower is better)
Translates to: CRLQGLQLCLFLPAL*NQLFCMKGFDPQGL
Trigger: AAGCCCCTGAGGATCGAATCCTTTCATGCAGAAAAGCTGGTTCCATAATGCGGGAAGGAAGAGACAGAGTTGTAAACCTTGCAGTCGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369441.7
3UTR GCA 90 bp ATTAAGACTTGTGGTTTGGGACACAAATCGGCAAGCCACAAGGACTaGATATCTGAGCCTAGAAGAAAATGGTGGCCCCACAACACAGTA +
Preference number: 1 (lower is better)
Translates to: IKTCGLGHKSASHKD*ISEPRRKWWPHNTV
Trigger: TACTGTGTTGTGGGGCCACCATTTTCTTCTAGGCTCAGATATGCAGTCCTTGTGGCTTGCCGATTTGTGTCCCAAACCACAAGTCTTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349139.6
3UTR GCA 90 bp GATTCGATCCTCAGGGGCTTCATCCGTCTCAAAGGCACCATCCTCTaGCTCAAGAGTATCTTGTATTCCAGGAGAAGATCCTTTGATTTT +
Preference number: 1 (lower is better)
Translates to: DSILRGFIRLKGTIL*LKSILYSRRRSFDF
Trigger: AAAATCAAAGGATCTTCTCCTGGAATACAAGATACTCTTGAGGCAGAGGATGGTGCCTTTGAGACGGATGAAGCCCCTGAGGATCGAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369441.7
3UTR TCA 90 bp CATCCTCTGCCTCAAGAGTATCTTGTATTCCAGGAGAAGATCCTTTaGTTTTCTTGGGGTCTGGTTCTTCCGGGTCTTCAATCTCTTGCA +
Preference number: 1 (lower is better)
Translates to: HPLPQEYLVFQEKIL*FSWGLVLPGLQSLA
Trigger: TGCAAGAGATTGAAGACCCGGAAGAACCAGACCCCAAGAAAATCAAAGGATCTTCTCCTGGAATACAAGATACTCTTGAGGCAGAGGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369441.7
3UTR CCA 90 bp TGGAGCCAGCCCATAATCTCATGTTGGAATTCCCTCAGGCAAAGCTaGAAACCACATCCTGATATCATCTGCAATGCGATCTTCTGTTAT +
Preference number: 1 (lower is better)
Translates to: WSQPIISCWNSLRQS*KPHPDIICNAIFCY
Trigger: ATAACAGAAGATCGCATTGCAGATGATATCAGGATGTGGTTTCCAGCTTTGCCTGAGGGAATTCCAACATGAGATTATGGGCTGGCTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349139.6
3UTR GCA 90 bp AGGTTCTTTTCTCGTAGAAACAATGCTTGTGTGATGGCATCCTTGTaGCCCTTTAGACGGTACAGACCACTTTCATTGATCACATCCCAT +
Preference number: 1 (lower is better)
Translates to: RFFSRRNNACVMASL*PFRRYRPLSLITSH
Trigger: ATGGGATGTGATCAATGAAAGTGGTCTGTACCGTCTAAAGGGGCACAAGGATGCCATCACACAAGCATTGTTTCTACGAGAAAAGAACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369441.7
3UTR CCA 90 bp GATGAATCCAGGGTTATTGTGCAGGACATGTCAAAGGGGAACAACTaGATGTGTAAAAGTACCATTAGAAGTCTACCTGAATGGGCCATG +
Preference number: 1 (lower is better)
Translates to: DESRVIVQDMSKGNN*MCKSTIRSLPEWAM
Trigger: CATGGCCCATTCAGGTAGACTTCTAATGGTACTTTTACACATCCAGTTGTTCCCCTTTGACATGTCCTGCACAATAACCCTGGATTCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349139.6
3UTR CCA 90 bp ATGCATTTTAAGTCCAAGAAATGGAGCCAGCCCATAATCTCATGTTaGAATTCCCTCAGGCAAAGCTGGAAACCACATCCTGATATCATC +
Preference number: 1 (lower is better)
Translates to: MHFKSKKWSQPIISC*NSLRQSWKPHPDII
Trigger: GATGATATCAGGATGTGGTTTCCAGCTTTGCCTGAGGGAATTCCAACATGAGATTATGGGCTGGCTCCATTTCTTGGACTTAAAATGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
3UTR CCA 90 bp GAACAAAACCATGGCAACAGGAAAGCTCCAGGTGTTTGGGATGATTaGCAGGGAGTTCAACTTGCCAAAAGCTTGAGTATTAGGAATATA +
Preference number: 1 (lower is better)
Translates to: EQNHGNRKAPGVWDD*QGVQLAKSLSIRNI
Trigger: TATATTCCTAATACTCAAGCTTTTGGCAAGTTGAACTCCCTGCCAATCATCCCAAACACCTGGAGCTTTCCTGTTGCCATGGTTTTGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349139.6
3UTR GCA 90 bp CCTTGGAAAGCACCTAGAATGCATTATCCTGCCTGCCTATTCTCTTaGCTTCATAGTTATGCCTTCAGAAACTCTATGCCAAAATTCACT +
Preference number: 1 (lower is better)
Translates to: PWKAPRMHYPACLFS*LHSYAFRNSMPKFT
Trigger: AGTGAATTTTGGCATAGAGTTTCTGAAGGCATAACTATGAAGGCAAGAGAATAGGCAGGCAGGATAATGCATTCTAGGTGCTTTCCAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
3UTR TCA 90 bp CAAGTGCCCTTACCCTCTCCACACAGGTTATTAGATGCAAATACCTaGGTCACTGCTGCTGATCATAGCAATGAAATCATTTGTATTTAT +
Preference number: 1 (lower is better)
Translates to: QVPLPSPHRLLDANT*VTAADHSNEIICIY
Trigger: ATAAATACAAATGATTTCATTGCTATGATCAGCAGCAGTGACTCAGGTATTTGCATCTAATAACCTGTGTGGAGAGGGTAAGGGCACTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349139.6
3UTR TCA 90 bp AATCTCATGTTGGAATTCCCTCAGGCAAAGCTGGAAACCACATCCTaGTATCATCTGCAATGCGATCTTCTGTTATTTGGTATTTTTAAG +
Preference number: 1 (lower is better)
Translates to: NLMLEFPQAKLETTS*YHLQCDLLLFGIFK
Trigger: CTTAAAAATACCAAATAACAGAAGATCGCATTGCAGATGATATCAGGATGTGGTTTCCAGCTTTGCCTGAGGGAATTCCAACATGAGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000349139.6
3UTR CCA 90 bp TATACAGACATAACTTGCAGAAGGTTAAGTCTGAGGACGCTGTTCTaGGTAATTTTTACAGTCCTTTTTAGCTCTAAGATCCATGACACT +
Preference number: 1 (lower is better)
Translates to: YTDITCRRLSLRTLF*VIFTVLFSSKIHDT
Trigger: AGTGTCATGGATCTTAGAGCTAAAAAGGACTGTAAAAATTACCCAGAACAGCGTCCTCAGACTTAACCTTCTGCAAGTTATGTCTGTATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000349139.6
3UTR CCA 90 bp TTGATGGATGGAAGAAAGAGGACATCGAGTTCAACTTCAAAGTTTTaGGCTGAGGTAATGAATCATGTATATGTAATATTAGATCTCAAC +
Preference number: 1 (lower is better)
Translates to: LMDGRKRTSSSTSKF*AEVMNHVYVILDLN
Trigger: GTTGAGATCTAATATTACATATACATGATTCATTACCTCAGCCCAAAACTTTGAAGTTGAACTCGATGTCCTCTTTCTTCCATCCATCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
3UTR-3UTR GCA 90 bp GCTCCAGGTGTTTGGGATGATTGGCAGGGAGTTCAACTTGCCAAAAGCTTGAGTGGAGTCTGGCTCTGTTaGCCAGACTGGAGTGCAGTG +
Preference number: 2 (lower is better)
Translates to: APGVWDDWQGVQLAKSLSGVWLC*PDWSAV
Trigger: CACTGCACTCCAGTCTGGGCAACAGAGCCAGACTCC...ACTCAAGCTTTTGGCAAGTTGAACTCCCTGCCAATCATCCCAAACACCTGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
3UTR-3UTR TCA 90 bp GCTCCAGGTGTTTGGGATGATTGGCAGGGAGTTCAACTTGCCAAAAGCTTGAGTAGGGAACAACAAGCTTaGGCTGCAAGGCTCAAGCTT +
Preference number: 2 (lower is better)
Translates to: APGVWDDWQGVQLAKSLSREQQA*AARLKL
Trigger: AAGCTTGAGCCTTGCAGCTCAAGCTTGTTGTTCCCT...ACTCAAGCTTTTGGCAAGTTGAACTCCCTGCCAATCATCCCAAACACCTGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
3UTR-3UTR TCA 90 bp CGGATCGACCCATCCTCATACCCAACAGCTAAGTGTAGCCCATCTGGGGAGGGGTCTTGTTTAAGCCCCTaGAGGATAAGAATCTGTAAA +
Preference number: 2 (lower is better)
Translates to: RIDPSSYPTAKCSPSGEGSCLSP*RIRICK
Trigger: TTTACAGATTCTTATCCTTCAGGGGCTTAAACAAGA...CCCCTCCCCAGATGGGCTACACTTAGCTGTTGGGTATGAGGATGGGTCGATCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369441.7
3UTR-3UTR GCA 90 bp CCAGTGATGAGTCGCTTTTCTTCTGACAACAGAACCAACCCCCATACCTCAGTCACCCAGATGCCAGTCTaGCTCCTAGCTGATCATACT +
Preference number: 2 (lower is better)
Translates to: PVMSRFSSDNRTNPHTSVTQMPV*LLADHT
Trigger: AGTATGATCAGCTAGGAGGCAGACTGGCATCTGGGT...GACTGAGGTATGGGGGTTGGTTCTGTTGTCAGAAGAAAAGCGACTCATCACTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369441.7
3UTR CAA 90 bp TCTAGCACAGAGTCAGTTCCATGGCAAGCAAGAATCCTGCCTGTCTaGTCGACTGCAAGGTTTACAACTCTGTCTCTTCCTTCCCGCATT +
Preference number: 2 (lower is better)
Translates to: SSTESVPWQARILPV*STARFTTLSLPSRI
Trigger: AATGCGGGAAGGAAGAGACAGAGTTGTAAACCTTGCAGTCGACAAGACAGGCAGGATTCTTGCTTGCCATGGAACTGACTCTGTGCTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369441.7
3UTR-3UTR TCA 90 bp GCTCCAGGTGTTTGGGATGATTGGCAGGGAGTTCAACTTGCCAAAAGCTTGAGTAAGACTAATCTGGCCTaGAAAGGCTGCATTGAGCAG +
Preference number: 2 (lower is better)
Translates to: APGVWDDWQGVQLAKSLSKTNLA*KGCIEQ
Trigger: CTGCTCAATGCAGCCTTTTCAGGCCAGATTAGTCTT...ACTCAAGCTTTTGGCAAGTTGAACTCCCTGCCAATCATCCCAAACACCTGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
3UTR-3UTR TCA 90 bp GCTCCAGGTGTTTGGGATGATTGGCAGGGAGTTCAACTTGCCAAAAGCTTGAGTAAAGAGGGACATGAATaGAAGACATGGTGGGGGAAG +
Preference number: 2 (lower is better)
Translates to: APGVWDDWQGVQLAKSLSKEGHE*KTWWGK
Trigger: CTTCCCCCACCATGTCTTTCATTCATGTCCCTCTTT...ACTCAAGCTTTTGGCAAGTTGAACTCCCTGCCAATCATCCCAAACACCTGGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000349139.6
3UTR-3UTR TCA 90 bp CTTGTCGACTGCAAGGTTTACAACTCTGTCTCTTCCTTCCCGCATTATGGAACCGAGTCGCTTTTCTTCTaGCAACAGAACCAACCCCCA +
Preference number: 2 (lower is better)
Translates to: LVDCKVYNSVSSFPHYGTESLFF*QQNQPP
Trigger: TGGGGGTTGGTTCTGTTGTCAGAAGAAAAGCGACTC...GGTTCCATAATGCGGGAAGGAAGAGACAGAGTTGTAAACCTTGCAGTCGACAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369441.7
3UTR-3UTR CCA 90 bp GCTCCAGGTGTTTGGGATGATTGGCAGGGAGTTCAACTTGCCAAAAGCTTGAGTCAAGGAACAGAAATCTaGAGTCGGTTTAGGGAGCAG +
Preference number: 2 (lower is better)
Translates to: APGVWDDWQGVQLAKSLSQGTEI*SRFREQ
Trigger: CTGCTCCCTAAACCGACTCCAGATTTCTGTTCCTTG...ACTCAAGCTTTTGGCAAGTTGAACTCCCTGCCAATCATCCCAAACACCTGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
3UTR-3UTR TCA 90 bp AAAGCAGTGCTGAGTATCAAGGTCCCACCATTTCACCATGGTATCTTTCCCACTGAAACAATGCTTGTGTaGTGGCATCCTTGTGCCCCT +
Preference number: 2 (lower is better)
Translates to: KAVLSIKVPPFHHGIFPTETMLV*WHPCAP
Trigger: AGGGGCACAAGGATGCCATCACACAAGCATTGTTTC...AGTGGGAAAGATACCATGGTGAAATGGTGGGACCTTGATACTCAGCACTGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369441.7
3UTR-3UTR CCA 90 bp GCTCCAGGTGTTTGGGATGATTGGCAGGGAGTTCAACTTGCCAAAAGCTTGAGTGAAGCCATTGATGGATaGAAGAAAGAGGACATCGAG +
Preference number: 2 (lower is better)
Translates to: APGVWDDWQGVQLAKSLSEAIDG*KKEDIE
Trigger: CTCGATGTCCTCTTTCTTCCATCCATCAATGGCTTC...ACTCAAGCTTTTGGCAAGTTGAACTCCCTGCCAATCATCCCAAACACCTGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
3UTR CAA 90 bp CCATCCTCTGCCTCAAGAGTATCTTGTATTCCAGGAGAAGATCCTTaGATTTTCTTGGGGTCTGGTTCTTCCGGGTCTTCAATCTCTTGC +
Preference number: 2 (lower is better)
Translates to: PSSASRVSCIPGEDP*IFLGSGSSGSSISC
Trigger: GCAAGAGATTGAAGACCCGGAAGAACCAGACCCCAAGAAAATCAAAGGATCTTCTCCTGGAATACAAGATACTCTTGAGGCAGAGGATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369441.7
3UTR-3UTR TCA 90 bp AAAGCAGTGCTGAGTATCAAGGTCCCACCATTTCACCATGGTATCTTTCCCACTCTGCTTTGTGACCATTaGAGGTCACATTTCCTTCCC +
Preference number: 2 (lower is better)
Translates to: KAVLSIKVPPFHHGIFPTLLCDH*RSHFLP
Trigger: GGGAAGGAAATGTGACCTTCAATGGTCACAAAGCAG...AGTGGGAAAGATACCATGGTGAAATGGTGGGACCTTGATACTCAGCACTGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369441.7
3UTR CAA 90 bp AGCAGGTTCTTTTCTCGTAGAAACAATGCTTGTGTGATGGCATCCTaGTGCCCCTTTAGACGGTACAGACCACTTTCATTGATCACATCC +
Preference number: 2 (lower is better)
Translates to: SRFFSRRNNACVMAS*CPFRRYRPLSLITS
Trigger: GGATGTGATCAATGAAAGTGGTCTGTACCGTCTAAAGGGGCACAAGGATGCCATCACACAAGCATTGTTTCTACGAGAAAAGAACCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369441.7
3UTR-3UTR TCA 90 bp AAAGGACTTGAATATATGGTGATACTACCTTTAAGAACCTTAGCCCCATCTCAACCTGCCGGGTTCAAGTaGTTCTCCTGTCTCAGCCTC +
Preference number: 2 (lower is better)
Translates to: KGLEYMVILPLRTLAPSQPAGFK*FSCLSL
Trigger: GAGGCTGAGACAGGAGAATCACTTGAACCCGGCAGG...TTGAGATGGGGCTAAGGTTCTTAAAGGTAGTATCACCATATATTCAAGTCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
3UTR-3UTR TCA 90 bp GCTCCAGGTGTTTGGGATGATTGGCAGGGAGTTCAACTTGCCAAAAGCTTGAGTTCAGATATTCCGAGGTaGAGGAGAAAGTTAAAGGAA +
Preference number: 2 (lower is better)
Translates to: APGVWDDWQGVQLAKSLSSDIPR*RRKLKE
Trigger: TTCCTTTAACTTTCTCCTTCACCTCGGAATATCTGA...ACTCAAGCTTTTGGCAAGTTGAACTCCCTGCCAATCATCCCAAACACCTGGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
3UTR-3UTR TCA 90 bp GGTTTACAACTCTGTCTCTTCCTTCCCGCATTATGGAACCAGCTTTTCTGCATGCAGGAGAAGATCCTTTaGTTTTCTTGGGGTCTGGTT +
Preference number: 2 (lower is better)
Translates to: GLQLCLFLPALWNQLFCMQEKIL*FSWGLV
Trigger: AACCAGACCCCAAGAAAATCAAAGGATCTTCTCCTG...CATGCAGAAAAGCTGGTTCCATAATGCGGGAAGGAAGAGACAGAGTTGTAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369441.7
3UTR-3UTR CCA 90 bp TTGGCTAGGTTCTGTACATGTCACTTTATCATAAAAGTTCTCCTTCTCTTCGATCTGTGTTGCCCAGGCTaGAATGCTGGTGGCACTGTC +
Preference number: 2 (lower is better)
Translates to: LARFCTCHFIIKVLLLFDLCCPG*NAGGTV
Trigger: GACAGTGCCACCAGCATTCCAGCCTGGGCAACACAG...ATCGAAGAGAAGGAGAACTTTTATGATAAAGTGACATGTACAGAACCTAGCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
3UTR-3UTR CCA 90 bp GGTTTACAACTCTGTCTCTTCCTTCCCGCATTATGGAACCAGCTTTTCTGCATGCATACCTCAGTCCGGTaGCCAACCATTGTTTTAAAG +
Preference number: 2 (lower is better)
Translates to: GLQLCLFLPALWNQLFCMHTSVR*PTIVLK
Trigger: CTTTAAAACAATGGTTGGCCACCGGACTGAGGTATG...CATGCAGAAAAGCTGGTTCCATAATGCGGGAAGGAAGAGACAGAGTTGTAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369441.7
3UTR-3UTR CCA 90 bp TTGTCGACTGCAAGGTTTACAACTCTGTCTCTTCCTTCCCGCATTATGGAACCAGATTTTCTTGGGGTCTaGTTCTTCCGGGTCTTCAAT +
Preference number: 2 (lower is better)
Translates to: LSTARFTTLSLPSRIMEPDFLGV*FFRVFN
Trigger: ATTGAAGACCCGGAAGAACCAGACCCCAAGAAAATC...TGGTTCCATAATGCGGGAAGGAAGAGACAGAGTTGTAAACCTTGCAGTCGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369441.7
3UTR CAA 90 bp CACTTCAGTGATTGTGTTATGCTCAAGAACATTAAGACTTGTGGTTaGGGACACAAATCGGCAAGCCACAAGGACTGCATATCTGAGCCT +
Preference number: 2 (lower is better)
Translates to: HFSDCVMLKNIKTCG*GHKSASHKDCISEP
Trigger: AGGCTCAGATATGCAGTCCTTGTGGCTTGCCGATTTGTGTCCCAAACCACAAGTCTTAATGTTCTTGAGCATAACACAATCACTGAAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349139.6
3UTR-3UTR TCA 90 bp GCTCCAGGTGTTTGGGATGATTGGCAGGGAGTTCAACTTGCCAAAAGCTTGAGTATAAGCCACCTGGCCTaGATGAATGAAAATATTTGT +
Preference number: 2 (lower is better)
Translates to: APGVWDDWQGVQLAKSLSISHLA*MNENIC
Trigger: ACAAATATTTTCATTCATTCAGGCCAGGTGGCTTAT...ACTCAAGCTTTTGGCAAGTTGAACTCCCTGCCAATCATCCCAAACACCTGGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349139.6
3UTR-3UTR TCA 90 bp GTAACTAGCAGGTTCTTTTCTCGTAGAAACAATGCTTGTGTGATGGCATCCTTGAGTCTGCCTCCTAGCTaGTCATACTTCAAGGTAGTG +
Preference number: 2 (lower is better)
Translates to: VTSRFFSRRNNACVMASLSLPPS*SYFKVV
Trigger: CACTACCTTGAAGTATGATCAGCTAGGAGGCAGACT...CAAGGATGCCATCACACAAGCATTGTTTCTACGAGAAAAGAACCTGCTAGTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369441.7
3UTR-3UTR GCA 90 bp TTGTCGACTGCAAGGTTTACAACTCTGTCTCTTCCTTCCCGCATTATGGAACCACAAGGTAGTGATAGCTaGTTTGTGACCATTGAAGGT +
Preference number: 2 (lower is better)
Translates to: LSTARFTTLSLPSRIMEPQGSDS*FVTIEG
Trigger: ACCTTCAATGGTCACAAAGCAGCTATCACTACCTTG...TGGTTCCATAATGCGGGAAGGAAGAGACAGAGTTGTAAACCTTGCAGTCGACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369441.7
3UTR-3UTR CCA 90 bp GCTCCAGGTGTTTGGGATGATTGGCAGGGAGTTCAACTTGCCAAAAGCTTGAGTCCAAAAATTGTAACTTaGCTAGGTTCTGTACATGTC +
Preference number: 2 (lower is better)
Translates to: APGVWDDWQGVQLAKSLSPKIVT*LGSVHV
Trigger: GACATGTACAGAACCTAGCCAAGTTACAATTTTTGG...ACTCAAGCTTTTGGCAAGTTGAACTCCCTGCCAATCATCCCAAACACCTGGAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000349139.6
3UTR-3UTR TCA 90 bp TTGGCTAGGTTCTGTACATGTCACTTTATCATAAAAGTTCTCCTTCTCTTCGATATAAGTACCACAGATTaGGGTCTGCGGCTGTGGTTG +
Preference number: 2 (lower is better)
Translates to: LARFCTCHFIIKVLLLFDISTTD*GLRLWL
Trigger: CAACCACAGCCGCAGACCTCAATCTGTGGTACTTAT...ATCGAAGAGAAGGAGAACTTTTATGATAAAGTGACATGTACAGAACCTAGCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
3UTR-3UTR CCA 90 bp CATATCTTTATTAAGATGAATCCAGGGTTATTGTGCAGGACATGTCAAAGGGGAAAGGAAAGTCCTCACTaGGAAAGTCTCTCTCCCTTC +
Preference number: 2 (lower is better)
Translates to: HIFIKMNPGLLCRTCQRGKESPH*ESLSPF
Trigger: GAAGGGAGAGAGACTTTCCCAGTGAGGACTTTCCTT...TCCCCTTTGACATGTCCTGCACAATAACCCTGGATTCATCTTAATAAAGATATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
3UTR-3UTR CCA 90 bp CATATCTTTATTAAGATGAATCCAGGGTTATTGTGCAGGACATGTCAAAGGGGAAGAAGTCTACCTGAATaGGCCATGTGTGAGGACAAG +
Preference number: 2 (lower is better)
Translates to: HIFIKMNPGLLCRTCQRGRSLPE*AMCEDK
Trigger: CTTGTCCTCACACATGGCCCATTCAGGTAGACTTCT...TCCCCTTTGACATGTCCTGCACAATAACCCTGGATTCATCTTAATAAAGATATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
3UTR-3UTR TCA 90 bp AAAGGACTTGAATATATGGTGATACTACCTTTAAGAACCTTAGCCCCATCTCAACTGCCTAAACAACACTaGCTCCTTGGAAAGCACCTA +
Preference number: 2 (lower is better)
Translates to: KGLEYMVILPLRTLAPSQLPKQH*LLGKHL
Trigger: TAGGTGCTTTCCAAGGAGTCAGTGTTGTTTAGGCAG...TTGAGATGGGGCTAAGGTTCTTAAAGGTAGTATCACCATATATTCAAGTCCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
3UTR-3UTR GCA 90 bp TTGGCTAGGTTCTGTACATGTCACTTTATCATAAAAGTTCTCCTTCTCTTCGATATCGCCCCAGTAAACTaGATATCACAGTGCTCCCAA +
Preference number: 2 (lower is better)
Translates to: LARFCTCHFIIKVLLLFDIAPVN*ISQCSQ
Trigger: TTGGGAGCACTGTGATATGCAGTTTACTGGGGCGAT...ATCGAAGAGAAGGAGAACTTTTATGATAAAGTGACATGTACAGAACCTAGCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349139.6
3UTR-3UTR GCA 90 bp CATATCTTTATTAAGATGAATCCAGGGTTATTGTGCAGGACATGTCAAAGGGGAGGAAAGCACCTAGAATaGATTATCCTGCCTGCCTAT +
Preference number: 2 (lower is better)
Translates to: HIFIKMNPGLLCRTCQRGGKHLE*IILPAY
Trigger: ATAGGCAGGCAGGATAATGCATTCTAGGTGCTTTCC...TCCCCTTTGACATGTCCTGCACAATAACCCTGGATTCATCTTAATAAAGATATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
3UTR-3UTR CCA 90 bp TTGGCTAGGTTCTGTACATGTCACTTTATCATAAAAGTTCTCCTTCTCTTCGATTCCCTCAGGCAAAGCTaGAAACCACATCCTGATATC +
Preference number: 2 (lower is better)
Translates to: LARFCTCHFIIKVLLLFDSLRQS*KPHPDI
Trigger: GATATCAGGATGTGGTTTCCAGCTTTGCCTGAGGGA...ATCGAAGAGAAGGAGAACTTTTATGATAAAGTGACATGTACAGAACCTAGCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
3UTR-3UTR TCA 90 bp TTGGCTAGGTTCTGTACATGTCACTTTATCATAAAAGTTCTCCTTCTCTTCGATCTGGAAACCACATCCTaGTATCATCTGCAATGCGAT +
Preference number: 2 (lower is better)
Translates to: LARFCTCHFIIKVLLLFDLETTS*YHLQCD
Trigger: ATCGCATTGCAGATGATATCAGGATGTGGTTTCCAG...ATCGAAGAGAAGGAGAACTTTTATGATAAAGTGACATGTACAGAACCTAGCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
3UTR-3UTR TCA 90 bp CATATCTTTATTAAGATGAATCCAGGGTTATTGTGCAGGACATGTCAAAGGGGATTAGATGCAAATACCTaGGTCACTGCTGCTGATCAT +
Preference number: 2 (lower is better)
Translates to: HIFIKMNPGLLCRTCQRGLDANT*VTAADH
Trigger: ATGATCAGCAGCAGTGACTCAGGTATTTGCATCTAA...TCCCCTTTGACATGTCCTGCACAATAACCCTGGATTCATCTTAATAAAGATATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
3UTR-3UTR GCA 90 bp AAAGGACTTGAATATATGGTGATACTACCTTTAAGAACCTTAGCCCCATCTCAAACAACAAGCTTGAGCTaGAAGGCTCAAGCTTTGAGA +
Preference number: 2 (lower is better)
Translates to: KGLEYMVILPLRTLAPSQTTSLS*KAQALR
Trigger: TCTCAAAGCTTGAGCCTTGCAGCTCAAGCTTGTTGT...TTGAGATGGGGCTAAGGTTCTTAAAGGTAGTATCACCATATATTCAAGTCCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
3UTR-3UTR GCA 90 bp TTGGCTAGGTTCTGTACATGTCACTTTATCATAAAAGTTCTCCTTCTCTTCGATGCCTGCCTATTCTCTTaGCTTCATAGTTATGCCTTC +
Preference number: 2 (lower is better)
Translates to: LARFCTCHFIIKVLLLFDACLFS*LHSYAF
Trigger: GAAGGCATAACTATGAAGGCAAGAGAATAGGCAGGC...ATCGAAGAGAAGGAGAACTTTTATGATAAAGTGACATGTACAGAACCTAGCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
3UTR-3UTR CCA 90 bp TTGGCTAGGTTCTGTACATGTCACTTTATCATAAAAGTTCTCCTTCTCTTCGATCCCATAATCTCATGTTaGAATTCCCTCAGGCAAAGC +
Preference number: 2 (lower is better)
Translates to: LARFCTCHFIIKVLLLFDPIISC*NSLRQS
Trigger: GCTTTGCCTGAGGGAATTCCAACATGAGATTATGGG...ATCGAAGAGAAGGAGAACTTTTATGATAAAGTGACATGTACAGAACCTAGCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
3UTR CAA 90 bp AAAATCCAATGGTCCAGAGAACTTCTACAATTTATTCCTCCACACTaGGAGTCTTCATGTCTCGTAAAGTTTCTCCACATTAGGTACAGT +
Preference number: 2 (lower is better)
Translates to: KIQWSRELLQFIPPH*ESSCLVKFLHIRYS
Trigger: ACTGTACCTAATGTGGAGAAACTTTACGAGACATGAAGACTCCAAGTGTGGAGGAATAAATTGTAGAAGTTCTCTGGACCATTGGATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
3UTR-3UTR TCA 90 bp CATATCTTTATTAAGATGAATCCAGGGTTATTGTGCAGGACATGTCAAAGGGGATTGGTATTTTTAAGATaGCGCCAACTCTTCTGTGCT +
Preference number: 2 (lower is better)
Translates to: HIFIKMNPGLLCRTCQRGLVFLR*RQLFCA
Trigger: AGCACAGAAGAGTTGGCGTCATCTTAAAAATACCAA...TCCCCTTTGACATGTCCTGCACAATAACCCTGGATTCATCTTAATAAAGATATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000349139.6
3UTR-3UTR TCA 90 bp TTGGCTAGGTTCTGTACATGTCACTTTATCATAAAAGTTCTCCTTCTCTTCGATGCAAGGCTCAAGCTTTaGGAGCACAGAAAGATTTTT +
Preference number: 2 (lower is better)
Translates to: LARFCTCHFIIKVLLLFDARLKL*EHRKIF
Trigger: AAAAATCTTTCTGTGCTCTCAAAGCTTGAGCCTTGC...ATCGAAGAGAAGGAGAACTTTTATGATAAAGTGACATGTACAGAACCTAGCCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
3UTR-3UTR GCA 90 bp CATATCTTTATTAAGATGAATCCAGGGTTATTGTGCAGGACATGTCAAAGGGGAACAATCTCAGCTCACTaGAATCTCAAAAGGCTTTTC +
Preference number: 2 (lower is better)
Translates to: HIFIKMNPGLLCRTCQRGTISAH*NLKRLF
Trigger: GAAAAGCCTTTTGAGATTGCAGTGAGCTGAGATTGT...TCCCCTTTGACATGTCCTGCACAATAACCCTGGATTCATCTTAATAAAGATATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000349139.6
3UTR-3UTR GCA 90 bp CATATCTTTATTAAGATGAATCCAGGGTTATTGTGCAGGACATGTCAAAGGGGATTATGCTTTCAAAGATaGCGAAACGCCTGCCTTTAT +
Preference number: 2 (lower is better)
Translates to: HIFIKMNPGLLCRTCQRGLCFQR*RNACLY
Trigger: ATAAAGGCAGGCGTTTCGGCATCTTTGAAAGCATAA...TCCCCTTTGACATGTCCTGCACAATAACCCTGGATTCATCTTAATAAAGATATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
3UTR-3UTR CCA 90 bp TTGGCTAGGTTCTGTACATGTCACTTTATCATAAAAGTTCTCCTTCTCTTCGATCTGAGGACGCTGTTCTaGGTAATTTTTACAGTCCTT +
Preference number: 2 (lower is better)
Translates to: LARFCTCHFIIKVLLLFDLRTLF*VIFTVL
Trigger: AAGGACTGTAAAAATTACCCAGAACAGCGTCCTCAG...ATCGAAGAGAAGGAGAACTTTTATGATAAAGTGACATGTACAGAACCTAGCCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000349139.6
3UTR-3UTR CCA 90 bp AAAGGACTTGAATATATGGTGATACTACCTTTAAGAACCTTAGCCCCATCTCAAACAACACTGACTCCTTaGAAAGCACCTAGAATGCAT +
Preference number: 2 (lower is better)
Translates to: KGLEYMVILPLRTLAPSQTTLTP*KAPRMH
Trigger: ATGCATTCTAGGTGCTTTCCAAGGAGTCAGTGTTGT...TTGAGATGGGGCTAAGGTTCTTAAAGGTAGTATCACCATATATTCAAGTCCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
3UTR-3UTR CCA 90 bp CATATCTTTATTAAGATGAATCCAGGGTTATTGTGCAGGACATGTCAAAGGGGAAGACATTCTAGACATTaGCATATCCATCCTCTAACC +
Preference number: 2 (lower is better)
Translates to: HIFIKMNPGLLCRTCQRGRHSRH*HIHPLT
Trigger: GGTTAGAGGATGGATATGCCAATGTCTAGAATGTCT...TCCCCTTTGACATGTCCTGCACAATAACCCTGGATTCATCTTAATAAAGATATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
3UTR-3UTR TCA 90 bp AAAGGACTTGAATATATGGTGATACTACCTTTAAGAACCTTAGCCCCATCTCAACCTTACTCACTTCAGTaGTTGTGTTATGCTCAAGAA +
Preference number: 2 (lower is better)
Translates to: KGLEYMVILPLRTLAPSQPYSLQ*LCYAQE
Trigger: TTCTTGAGCATAACACAATCACTGAAGTGAGTAAGG...TTGAGATGGGGCTAAGGTTCTTAAAGGTAGTATCACCATATATTCAAGTCCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
3UTR-3UTR TCA 90 bp TTGGCTAGGTTCTGTACATGTCACTTTATCATAAAAGTTCTCCTTCTCTTCGATGCACTATCAGGCTTTTaGGTTATAAATGGTGGCAAA +
Preference number: 2 (lower is better)
Translates to: LARFCTCHFIIKVLLLFDALSGF*VINGGK
Trigger: TTTGCCACCATTTATAACTCAAAAGCCTGATAGTGC...ATCGAAGAGAAGGAGAACTTTTATGATAAAGTGACATGTACAGAACCTAGCCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349139.6
3UTR-3UTR CCA 90 bp AAAGGACTTGAATATATGGTGATACTACCTTTAAGAACCTTAGCCCCATCTCAATTTAAGTCCAAGAAATaGAGCCAGCCCATAATCTCA +
Preference number: 2 (lower is better)
Translates to: KGLEYMVILPLRTLAPSQFKSKK*SQPIIS
Trigger: TGAGATTATGGGCTGGCTCCATTTCTTGGACTTAAA...TTGAGATGGGGCTAAGGTTCTTAAAGGTAGTATCACCATATATTCAAGTCCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
3UTR-3UTR CCA 90 bp AAAGGACTTGAATATATGGTGATACTACCTTTAAGAACCTTAGCCCCATCTCAAGTCCTAGATCTCTGCTaGAGATTTGCTAGATATCTT +
Preference number: 2 (lower is better)
Translates to: KGLEYMVILPLRTLAPSQVLDLC*RFARYL
Trigger: AAGATATCTAGCAAATCTCCAGCAGAGATCTAGGAC...TTGAGATGGGGCTAAGGTTCTTAAAGGTAGTATCACCATATATTCAAGTCCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
3UTR-3UTR TCA 90 bp TTGGCTAGGTTCTGTACATGTCACTTTATCATAAAAGTTCTCCTTCTCTTCGATAGCAGAGAAAAGTCATaGCATTACAAGAAAAAGCTG +
Preference number: 2 (lower is better)
Translates to: LARFCTCHFIIKVLLLFDSREKS*HYKKKL
Trigger: CAGCTTTTTCTTGTAATGTCATGACTTTTCTCTGCT...ATCGAAGAGAAGGAGAACTTTTATGATAAAGTGACATGTACAGAACCTAGCCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000349139.6
3UTR-3UTR TCA 90 bp TTGGCTAGGTTCTGTACATGTCACTTTATCATAAAAGTTCTCCTTCTCTTCGATTACACAGTATGTTACTaGAATAATTTCACAGCCACC +
Preference number: 2 (lower is better)
Translates to: LARFCTCHFIIKVLLLFDYTVCY*NNFTAT
Trigger: GGTGGCTGTGAAATTATTTCAGTAACATACTGTGTA...ATCGAAGAGAAGGAGAACTTTTATGATAAAGTGACATGTACAGAACCTAGCCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
3UTR-3UTR CCA 90 bp TTGGCTAGGTTCTGTACATGTCACTTTATCATAAAAGTTCTCCTTCTCTTCGATTTGAGTTATAAATGGTaGCAAAGCTACGGGAAAACA +
Preference number: 2 (lower is better)
Translates to: LARFCTCHFIIKVLLLFDLSYKW*QSYGKT
Trigger: TGTTTTCCCGTAGCTTTGCCACCATTTATAACTCAA...ATCGAAGAGAAGGAGAACTTTTATGATAAAGTGACATGTACAGAACCTAGCCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349139.6
3UTR-3UTR GCA 90 bp AAAGGACTTGAATATATGGTGATACTACCTTTAAGAACCTTAGCCCCATCTCAAGAATCAAAAGTTATATaGAGATTTTTGACTGTGCGG +
Preference number: 2 (lower is better)
Translates to: KGLEYMVILPLRTLAPSQESKVI*RFLTVR
Trigger: CCGCACAGTCAAAAATCTGCATATAACTTTTGATTC...TTGAGATGGGGCTAAGGTTCTTAAAGGTAGTATCACCATATATTCAAGTCCTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000349139.6
3UTR GCA 72 bp CTCAGGGGCTTCATCCGTCTCAAAGGCACCATCCTCTaGCTCAAGAGTATCTTGTATTCCAGGAGAAGATCC +
Preference number: 3 (lower is better)
Translates to: LRGFIRLKGTIL*LKSILYSRRRS
Trigger: GGATCTTCTCCTGGAATACAAGATACTCTTGAGGCAGAGGATGGTGCCTTTGAGACGGATGAAGCCCCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369441.7
3UTR-3UTR CAA 90 bp GCTCCAGGTGTTTGGGATGATTGGCAGGGAGTTCAACTTGCCAAAAGCTTGAGTAAGGGAACAACAAGCTaGAGCTGCAAGGCTCAAGCT +
Preference number: 3 (lower is better)
Translates to: APGVWDDWQGVQLAKSLSKGTTS*SCKAQA
Trigger: AGCTTGAGCCTTGCAGCTCAAGCTTGTTGTTCCCTT...ACTCAAGCTTTTGGCAAGTTGAACTCCCTGCCAATCATCCCAAACACCTGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
3UTR TCA 72 bp TCTTCCTTCCCGCATTATGGAACCAGCTTTTCTGCATaGAAGGATTCGATCCTCAGGGGCTTCATCCGTCTC +
Preference number: 3 (lower is better)
Translates to: SSFPHYGTSFSA*KDSILRGFIRL
Trigger: GAGACGGATGAAGCCCCTGAGGATCGAATCCTTTCATGCAGAAAAGCTGGTTCCATAATGCGGGAAGGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369441.7
3UTR TCA 72 bp AAACCATGGCAACAGGAAAGCTCCAGGTGTTTGGGATaGTTGGCAGGGAGTTCAACTTGCCAAAAGCTTGAG +
Preference number: 3 (lower is better)
Translates to: KPWQQESSRCLG*LAGSSTCQKLE
Trigger: CTCAAGCTTTTGGCAAGTTGAACTCCCTGCCAATCATCCCAAACACCTGGAGCTTTCCTGTTGCCATGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
3UTR GCA 72 bp CCTATATACAGTCCTGTACCTACCAACAGATACCATTaGTTTCCTGGGCACTGTCCTAGATCTCTGCTGGAG +
Preference number: 3 (lower is better)
Translates to: PIYSPVPTNRYH*FPGHCPRSLLE
Trigger: CTCCAGCAGAGATCTAGGACAGTGCCCAGGAAAGCAATGGTATCTGTTGGTAGGTACAGGACTGTATATAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349139.6
3UTR GCA 72 bp CTAGCACAGAGTCAGTTCCATGGCAAGCAAGAATCCTaGCTGTCTTGTCGACTGCAAGGTTTACAACTCTGT +
Preference number: 3 (lower is better)
Translates to: LAQSQFHGKQES*LSCRLQGLQLC
Trigger: ACAGAGTTGTAAACCTTGCAGTCGACAAGACAGGCAGGATTCTTGCTTGCCATGGAACTGACTCTGTGCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369441.7
3UTR CCA 72 bp TGGATGTGTAAAAGTACCATTAGAAGTCTACCTGAATaGGCCATGTGTGAGGACAAGAACTGGGAGTGGGGG +
Preference number: 3 (lower is better)
Translates to: WMCKSTIRSLPE*AMCEDKNWEWG
Trigger: CCCCCACTCCCAGTTCTTGTCCTCACACATGGCCCATTCAGGTAGACTTCTAATGGTACTTTTACACATCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
3UTR CCA 72 bp GAACAAAACCATGGCAACAGGAAAGCTCCAGGTGTTTaGGATGATTGGCAGGGAGTTCAACTTGCCAAAAGC +
Preference number: 3 (lower is better)
Translates to: EQNHGNRKAPGV*DDWQGVQLAKS
Trigger: GCTTTTGGCAAGTTGAACTCCCTGCCAATCATCCCAAACACCTGGAGCTTTCCTGTTGCCATGGTTTTGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349139.6
3UTR-3UTR CAA 90 bp CATATCTTTATTAAGATGAATCCAGGGTTATTGTGCAGGACATGTCAAAGGGGAGGTCTGCGGCTGTGGTaGCCTGCCAATCCAGACAGA +
Preference number: 3 (lower is better)
Translates to: HIFIKMNPGLLCRTCQRGGLRLW*PANPDR
Trigger: TCTGTCTGGATTGGCAGGCAACCACAGCCGCAGACC...TCCCCTTTGACATGTCCTGCACAATAACCCTGGATTCATCTTAATAAAGATATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
3UTR-3UTR CAA 90 bp GCTCCAGGTGTTTGGGATGATTGGCAGGGAGTTCAACTTGCCAAAAGCTTGAGTATGCCCTCCTGGAACTaGTTTTGGTTTGGAAACCAT +
Preference number: 3 (lower is better)
Translates to: APGVWDDWQGVQLAKSLSMPSWN*FWFGNH
Trigger: ATGGTTTCCAAACCAAAACAAGTTCCAGGAGGGCAT...ACTCAAGCTTTTGGCAAGTTGAACTCCCTGCCAATCATCCCAAACACCTGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349139.6
3UTR-3UTR CAA 90 bp TTGTCGACTGCAAGGTTTACAACTCTGTCTCTTCCTTCCCGCATTATGGAACCAATAATATCTGTGTCCTaGGACCCAGATGCCAGTCTG +
Preference number: 3 (lower is better)
Translates to: LSTARFTTLSLPSRIMEPIISVS*DPDASL
Trigger: CAGACTGGCATCTGGGTCCAAGGACACAGATATTAT...TGGTTCCATAATGCGGGAAGGAAGAGACAGAGTTGTAAACCTTGCAGTCGACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369441.7
3UTR TCA 72 bp CTAGCAGGTTCTTTTCTCGTAGAAACAATGCTTGTGTaGTGGCATCCTTGTGCCCCTTTAGACGGTACAGAC +
Preference number: 3 (lower is better)
Translates to: LAGSFLVETMLV*WHPCAPLDGTD
Trigger: GTCTGTACCGTCTAAAGGGGCACAAGGATGCCATCACACAAGCATTGTTTCTACGAGAAAAGAACCTGCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369441.7
3UTR TCA 72 bp TCAGTCCGGTGGCCAACCATTGTTTTAAAGCAGTGCTaGGTATCAAGGTCCCACCATTTCACCATGGTATCT +
Preference number: 3 (lower is better)
Translates to: SVRWPTIVLKQC*VSRSHHFTMVS
Trigger: AGATACCATGGTGAAATGGTGGGACCTTGATACTCAGCACTGCTTTAAAACAATGGTTGGCCACCGGACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369441.7
3UTR CCA 72 bp AAGTCCAAGAAATGGAGCCAGCCCATAATCTCATGTTaGAATTCCCTCAGGCAAAGCTGGAAACCACATCCT +
Preference number: 3 (lower is better)
Translates to: KSKKWSQPIISC*NSLRQSWKPHP
Trigger: AGGATGTGGTTTCCAGCTTTGCCTGAGGGAATTCCAACATGAGATTATGGGCTGGCTCCATTTCTTGGACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349139.6
3UTR CCA 72 bp CATGGCAACAGGAAAGCTCCAGGTGTTTGGGATGATTaGCAGGGAGTTCAACTTGCCAAAAGCTTGAGTATT +
Preference number: 3 (lower is better)
Translates to: HGNRKAPGVWDD*QGVQLAKSLSI
Trigger: AATACTCAAGCTTTTGGCAAGTTGAACTCCCTGCCAATCATCCCAAACACCTGGAGCTTTCCTGTTGCCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
3UTR GCA 72 bp TCTCGTAGAAACAATGCTTGTGTGATGGCATCCTTGTaGCCCTTTAGACGGTACAGACCACTTTCATTGATC +
Preference number: 3 (lower is better)
Translates to: SRRNNACVMASL*PFRRYRPLSLI
Trigger: GATCAATGAAAGTGGTCTGTACCGTCTAAAGGGGCACAAGGATGCCATCACACAAGCATTGTTTCTACGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369441.7
3UTR CCA 72 bp CCCCATCTCAAACTTAGGAGCTTAAATTGTGAGGAATaGGGGTGGATTGCAGACAGTAACTGTAAGCCAATG +
Preference number: 3 (lower is better)
Translates to: PHLKLRSLNCEE*GWIADSNCKPM
Trigger: CATTGGCTTACAGTTACTGTCTGCAATCCACCCCCATTCCTCACAATTTAAGCTCCTAAGTTTGAGATGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349139.6
3UTR TCA 72 bp TCTTCTTATAGTCAGAAACCTATAAGCCACCTGGCCTaGATGAATGAAAATATTTGTTTAGGCCGGGCCCGG +
Preference number: 3 (lower is better)
Translates to: SSYSQKPISHLA*MNENICLGRAR
Trigger: CCGGGCCCGGCCTAAACAAATATTTTCATTCATTCAGGCCAGGTGGCTTATAGGTTTCTGACTATAAGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
3UTR GCA 72 bp AAGTACCACAGATTGAGGTCTGCGGCTGTGGTTGCCTaGCAATCCAGACAGACAATTCATTTTATAAACAGA +
Preference number: 3 (lower is better)
Translates to: KYHRLRSAAVVA*QSRQTIHFINR
Trigger: TCTGTTTATAAAATGAATTGTCTGTCTGGATTGGCAGGCAACCACAGCCGCAGACCTCAATCTGTGGTACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
3UTR GCA 72 bp GCAGTGAGCTCAAGTGTTGTGCGTATGCACTTAAAATaGTGTGACACTAATCACCTGTGCATGAACAACTCA +
Preference number: 3 (lower is better)
Translates to: AVSSSVVRMHLK*CDTNHLCMNNS
Trigger: TGAGTTGTTCATGCACAGGTGATTAGTGTCACAGCATTTTAAGTGCATACGCACAACACTTGAGCTCACTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
3UTR GCA 72 bp GCACCTAGAATGCATTATCCTGCCTGCCTATTCTCTTaGCTTCATAGTTATGCCTTCAGAAACTCTATGCCA +
Preference number: 3 (lower is better)
Translates to: APRMHYPACLFS*LHSYAFRNSMP
Trigger: TGGCATAGAGTTTCTGAAGGCATAACTATGAAGGCAAGAGAATAGGCAGGCAGGATAATGCATTCTAGGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349139.6
3UTR CCA 72 bp CAAGGTTTACAACTCTGTCTCTTCCTTCCCGCATTATaGAACCAGCTTTTCTGCATGAAAGGATTCGATCCT +
Preference number: 3 (lower is better)
Translates to: QGLQLCLFLPAL*NQLFCMKGFDP
Trigger: AGGATCGAATCCTTTCATGCAGAAAAGCTGGTTCCATAATGCGGGAAGGAAGAGACAGAGTTGTAAACCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369441.7
3UTR-3UTR CAA 90 bp ATTTATTCCCTGCTAGAATATAAAGGGAACAACAAGCTTGAGCTGCAAGGCTCAGCCCATAATCTCATGTaGGAATTCCCTCAGGCAAAG +
Preference number: 3 (lower is better)
Translates to: IYSLLEYKGNNKLELQGSAHNLM*EFPQAK
Trigger: CTTTGCCTGAGGGAATTCCAACATGAGATTATGGGC...TGAGCCTTGCAGCTCAAGCTTGTTGTTCCCTTTATATTCTAGCAGGGAATAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349139.6
3UTR TCA 72 bp TTGGAATTCCCTCAGGCAAAGCTGGAAACCACATCCTaGTATCATCTGCAATGCGATCTTCTGTTATTTGGT +
Preference number: 3 (lower is better)
Translates to: LEFPQAKLETTS*YHLQCDLLLFG
Trigger: ACCAAATAACAGAAGATCGCATTGCAGATGATATCAGGATGTGGTTTCCAGCTTTGCCTGAGGGAATTCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349139.6
3UTR GCA 72 bp TTTGTTCATTTATGCTTTCAAAGATGCCGAAACGCCTaGCTTTATGTAGCTTACATTCCAGTGGGAGGACAG +
Preference number: 3 (lower is better)
Translates to: FVHLCFQRCRNA*LYVAYIPVGGQ
Trigger: CTGTCCTCCCACTGGAATGTAAGCTACATAAAGGCAGGCGTTTCGGCATCTTTGAAAGCATAAATGAACAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349139.6
3UTR-3UTR CAA 90 bp CATATCTTTATTAAGATGAATCCAGGGTTATTGTGCAGGACATGTCAAAGGGGATGCAAGGCTCAAGCTTaGAGAGCACAGAAAGATTTT +
Preference number: 3 (lower is better)
Translates to: HIFIKMNPGLLCRTCQRGCKAQA*RAQKDF
Trigger: AAAATCTTTCTGTGCTCTCAAAGCTTGAGCCTTGCA...TCCCCTTTGACATGTCCTGCACAATAACCCTGGATTCATCTTAATAAAGATATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
3UTR-3UTR CAA 90 bp AAAGGACTTGAATATATGGTGATACTACCTTTAAGAACCTTAGCCCCATCTCAAATTAAGACTTGTGGTTaGGGACACAAATCGGCAAGC +
Preference number: 3 (lower is better)
Translates to: KGLEYMVILPLRTLAPSQIKTCG*GHKSAS
Trigger: GCTTGCCGATTTGTGTCCCAAACCACAAGTCTTAAT...TTGAGATGGGGCTAAGGTTCTTAAAGGTAGTATCACCATATATTCAAGTCCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
3UTR TCA 72 bp TTACCCTCTCCACACAGGTTATTAGATGCAAATACCTaGGTCACTGCTGCTGATCATAGCAATGAAATCATT +
Preference number: 3 (lower is better)
Translates to: LPSPHRLLDANT*VTAADHSNEII
Trigger: AATGATTTCATTGCTATGATCAGCAGCAGTGACTCAGGTATTTGCATCTAATAACCTGTGTGGAGAGGGTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349139.6
3UTR CCA 72 bp GAAACTGCAAAATCTGAGGTAGAAGCCATTGATGGATaGAAGAAAGAGGACATCGAGTTCAACTTCAAAGTT +
Preference number: 3 (lower is better)
Translates to: ETAKSEVEAIDG*KKEDIEFNFKV
Trigger: AACTTTGAAGTTGAACTCGATGTCCTCTTTCTTCCATCCATCAATGGCTTCTACCTCAGATTTTGCAGTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
3UTR-3UTR CAA 90 bp CATATCTTTATTAAGATGAATCCAGGGTTATTGTGCAGGACATGTCAAAGGGGACTCCTGGAACTTGTTTaGGTTTGGAAACCATCAAAA +
Preference number: 3 (lower is better)
Translates to: HIFIKMNPGLLCRTCQRGLLELV*VWKPSK
Trigger: TTTTGATGGTTTCCAAACCAAAACAAGTTCCAGGAG...TCCCCTTTGACATGTCCTGCACAATAACCCTGGATTCATCTTAATAAAGATATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
3UTR GCA 72 bp CTCAGGCAAAGCTGGAAACCACATCCTGATATCATCTaGAATGCGATCTTCTGTTATTTGGTATTTTTAAGA +
Preference number: 3 (lower is better)
Translates to: LRQSWKPHPDII*NAIFCYLVFLR
Trigger: TCTTAAAAATACCAAATAACAGAAGATCGCATTGCAGATGATATCAGGATGTGGTTTCCAGCTTTGCCTGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000349139.6
3UTR CCA 72 bp ATAACTTGCAGAAGGTTAAGTCTGAGGACGCTGTTCTaGGTAATTTTTACAGTCCTTTTTAGCTCTAAGATC +
Preference number: 3 (lower is better)
Translates to: ITCRRLSLRTLF*VIFTVLFSSKI
Trigger: GATCTTAGAGCTAAAAAGGACTGTAAAAATTACCCAGAACAGCGTCCTCAGACTTAACCTTCTGCAAGTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000349139.6
3UTR-3UTR CAA 90 bp AAAGGACTTGAATATATGGTGATACTACCTTTAAGAACCTTAGCCCCATCTCAAAGCACTATCAGGCTTTaGAGTTATAAATGGTGGCAA +
Preference number: 3 (lower is better)
Translates to: KGLEYMVILPLRTLAPSQSTIRL*SYKWWQ
Trigger: TTGCCACCATTTATAACTCAAAAGCCTGATAGTGCT...TTGAGATGGGGCTAAGGTTCTTAAAGGTAGTATCACCATATATTCAAGTCCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
3UTR-3UTR CAA 90 bp CATATCTTTATTAAGATGAATCCAGGGTTATTGTGCAGGACATGTCAAAGGGGAATCTCTGCTGGAGATTaGCTAGATATCTTTAGAATG +
Preference number: 3 (lower is better)
Translates to: HIFIKMNPGLLCRTCQRGISAGD*LDIFRM
Trigger: CATTCTAAAGATATCTAGCAAATCTCCAGCAGAGAT...TCCCCTTTGACATGTCCTGCACAATAACCCTGGATTCATCTTAATAAAGATATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
3UTR-3UTR CAA 90 bp AAAGGACTTGAATATATGGTGATACTACCTTTAAGAACCTTAGCCCCATCTCAAACCAAAAATTGTAACTaGGCTAGGTTCTGTACATGT +
Preference number: 3 (lower is better)
Translates to: KGLEYMVILPLRTLAPSQTKNCN*ARFCTC
Trigger: ACATGTACAGAACCTAGCCAAGTTACAATTTTTGGT...TTGAGATGGGGCTAAGGTTCTTAAAGGTAGTATCACCATATATTCAAGTCCTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000349139.6
3UTR CCA 72 bp GGAAGAAAGAGGACATCGAGTTCAACTTCAAAGTTTTaGGCTGAGGTAATGAATCATGTATATGTAATATTA +
Preference number: 3 (lower is better)
Translates to: GRKRTSSSTSKF*AEVMNHVYVIL
Trigger: TAATATTACATATACATGATTCATTACCTCAGCCCAAAACTTTGAAGTTGAACTCGATGTCCTCTTTCTTCC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR CCA 90 bp TCCCGCATTATGGAACCAGCTTTTCTGCATGAAAGGATTCGATCCTCAGGGGCTAGGCTCCCAGCCGATTaGACCCGCCCACAAGACCTG +
Preference number: 4 (lower is better)
Translates to: SRIMEPAFLHERIRSSGARLPAD*TRPQDL
Trigger: CAGGTCTTGTGGGCGGGTCCAATCGGCTGGGAGCCT...AGCCCCTGAGGATCGAATCCTTTCATGCAGAAAAGCTGGTTCCATAATGCGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369441.7
CDS-3UTR TCA 90 bp TCCTTCCCCACTCAGGAGACTGAAGATTCGGATCGACCCATCCTCATACCCAACGTAGGTACTGCTTGGTaGGCCCCATGTTGTGATGTC +
Preference number: 4 (lower is better)
Translates to: SFPTQETEDSDRPILIPNVGTAW*APCCDV
Trigger: GACATCACAACATGGGGCTCACCAAGCAGTACCTAC...GTTGGGTATGAGGATGGGTCGATCCGAATCTTCAGTCTCCTGAGTGGGGAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369441.7
CDS-3UTR TCA 90 bp GCTCCAGGTGTTTGGGATGATTGGCAGGGAGTTCAACTTGCCAAAAGCTTGAGTCCTCAGTTCACTGTCTaGGGCCCCAGTGATGAGTCG +
Preference number: 4 (lower is better)
Translates to: APGVWDDWQGVQLAKSLSPQFTV*GPSDES
Trigger: CGACTCATCACTGGGGCCTCAGACAGTGAACTGAGG...ACTCAAGCTTTTGGCAAGTTGAACTCCCTGCCAATCATCCCAAACACCTGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR GCA 90 bp ATCGACCCATCCTCATACCCAACAGCTAAGTGTAGCCCATCTGGGGAGGGGCATGGCAAGCAAGAATCCTaGCTGTCTTGTCGACTGCAA +
Preference number: 4 (lower is better)
Translates to: IDPSSYPTAKCSPSGEGHGKQES*LSCRLQ
Trigger: TTGCAGTCGACAAGACAGGCAGGATTCTTGCTTGCC...ATGCCCCTCCCCAGATGGGCTACACTTAGCTGTTGGGTATGAGGATGGGTCGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369441.7
CDS-3UTR GCA 90 bp CGGATCGACCCATCCTCATACCCAACAGCTAAGTGTAGCCCATCTGGGGAGGGGTGGAACCAGCTTTTCTaGATGAAAGGATTCGATCCT +
Preference number: 4 (lower is better)
Translates to: RIDPSSYPTAKCSPSGEGWNQLF*MKGFDP
Trigger: AGGATCGAATCCTTTCATGCAGAAAAGCTGGTTCCA...CCCCTCCCCAGATGGGCTACACTTAGCTGTTGGGTATGAGGATGGGTCGATCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369441.7
CDS-3UTR GCA 90 bp AACCAACCCCCATACCTCAGTCCGGTGGCCAACCATTGTTTTAAAGCAGTGCTGACCCAGATGCCAGTCTaGCTCCTAGCTGATCATACT +
Preference number: 4 (lower is better)
Translates to: NQPPYLSPVANHCFKAVLTQMPV*LLADHT
Trigger: AGTATGATCAGCTAGGAGGCAGACTGGCATCTGGGT...CAGCACTGCTTTAAAACAATGGTTGGCCACCGGACTGAGGTATGGGGGTTGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369441.7
CDS-3UTR TCA 90 bp ACAACTCTGTCTCTTCCTTCCCGCATTATGGAACCAGCTTTTCTGCATGAAAGGCCCCACTCAGGAGACTaGAGATTCGGATCGACCCAT +
Preference number: 4 (lower is better)
Translates to: TTLSLPSRIMEPAFLHERPHSGD*RFGSTH
Trigger: ATGGGTCGATCCGAATCTTCAGTCTCCTGAGTGGGG...CCTTTCATGCAGAAAAGCTGGTTCCATAATGCGGGAAGGAAGAGACAGAGTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369441.7
CDS-3UTR TCA 90 bp GCTCCAGGTGTTTGGGATGATTGGCAGGGAGTTCAACTTGCCAAAAGCTTGAGTGAAACAATGCTTGTGTaGTGGCATCCTTGTGCCCCT +
Preference number: 4 (lower is better)
Translates to: APGVWDDWQGVQLAKSLSETMLV*WHPCAP
Trigger: AGGGGCACAAGGATGCCATCACACAAGCATTGTTTC...ACTCAAGCTTTTGGCAAGTTGAACTCCCTGCCAATCATCCCAAACACCTGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR TCA 90 bp ATTCGGATCGACCCATCCTCATACCCAACAGCTAAGTGTAGCCCATCTGGGGAGCAGGAGAAGATCCTTTaGTTTTCTTGGGGTCTGGTT +
Preference number: 4 (lower is better)
Translates to: IRIDPSSYPTAKCSPSGEQEKIL*FSWGLV
Trigger: AACCAGACCCCAAGAAAATCAAAGGATCTTCTCCTG...CTCCCCAGATGGGCTACACTTAGCTGTTGGGTATGAGGATGGGTCGATCCGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369441.7
CDS-3UTR TCA 90 bp GCTCCAGGTGTTTGGGATGATTGGCAGGGAGTTCAACTTGCCAAAAGCTTGAGTCTCCAGCAGATTCCCTaGAGCCAAGTCATAAAGCTG +
Preference number: 4 (lower is better)
Translates to: APGVWDDWQGVQLAKSLSLQQIP*SQVIKL
Trigger: CAGCTTTATGACTTGGCTTCAGGGAATCTGCTGGAG...ACTCAAGCTTTTGGCAAGTTGAACTCCCTGCCAATCATCCCAAACACCTGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR GCA 90 bp CCAGTGATGAGTCGCTTTTCTTCTGACAACAGAACCAACCCCCATACCTCAGTCGTGATGGCATCCTTGTaGCCCTTTAGACGGTACAGA +
Preference number: 4 (lower is better)
Translates to: PVMSRFSSDNRTNPHTSVVMASL*PFRRYR
Trigger: TCTGTACCGTCTAAAGGGGCACAAGGATGCCATCAC...GACTGAGGTATGGGGGTTGGTTCTGTTGTCAGAAGAAAAGCGACTCATCACTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369441.7
CDS-3UTR GCA 90 bp ACACACACACACACACACACACACACACACACACACACGAGTGTATTAATTCCTCCAGGAAGCGGAGCTTaGAGTGAGCCAAGATCGTGC +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTHTHTSVLIPPGSGA*SEPRSC
Trigger: GCACGATCTTGGCTCACTGCAAGCTCCGCTTCCTGG...AGGAATTAATACACTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR CCA 90 bp TCCTTCCCCACTCAGGAGACTGAAGATTCGGATCGACCCATCCTCATACCCAACCATACCTCAGTCCGGTaGCCAACCATTGTTTTAAAG +
Preference number: 4 (lower is better)
Translates to: SFPTQETEDSDRPILIPNHTSVR*PTIVLK
Trigger: CTTTAAAACAATGGTTGGCCACCGGACTGAGGTATG...GTTGGGTATGAGGATGGGTCGATCCGAATCTTCAGTCTCCTGAGTGGGGAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369441.7
CDS-3UTR CCA 90 bp TCCTTCCCCACTCAGGAGACTGAAGATTCGGATCGACCCATCCTCATACCCAACTTCCTTCCCGCATTATaGAACCAGCTTTTCTGCATG +
Preference number: 4 (lower is better)
Translates to: SFPTQETEDSDRPILIPNFLPAL*NQLFCM
Trigger: CATGCAGAAAAGCTGGTTCCATAATGCGGGAAGGAA...GTTGGGTATGAGGATGGGTCGATCCGAATCTTCAGTCTCCTGAGTGGGGAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369441.7
CDS-3UTR CCA 90 bp GCTCCAGGTGTTTGGGATGATTGGCAGGGAGTTCAACTTGCCAAAAGCTTGAGTACCTTGAGTCTCTCCTaGAACTGCTGGTTGGTCTTC +
Preference number: 4 (lower is better)
Translates to: APGVWDDWQGVQLAKSLSTLSLS*NCWLVF
Trigger: GAAGACCAACCAGCAGTTCCAGGAGAGACTCAAGGT...ACTCAAGCTTTTGGCAAGTTGAACTCCCTGCCAATCATCCCAAACACCTGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR CCA 90 bp ACACACACACACACACACACACACACACACACACACACGAGTGTATTAATTCCTGGGGTTGCTGGGAAGTaGAACCTCTTTCCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTHTHTSVLIPGVAGK*NLFPCS
Trigger: GCTGCAGGGAAAGAGGTTCCACTTCCCAGCAACCCC...AGGAATTAATACACTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR CCA 90 bp ACACACACACACACACACACACACACACACACACACACGAGTGTATTAATTCCTCTGTGTTGCCCAGGCTaGAATGCTGGTGGCACTGTC +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTHTHTSVLIPLCCPG*NAGGTV
Trigger: GACAGTGCCACCAGCATTCCAGCCTGGGCAACACAG...AGGAATTAATACACTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR TCA 90 bp GGTTTACAACTCTGTCTCTTCCTTCCCGCATTATGGAACCAGCTTTTCTGCATGGTGAGCCCCATGTTGTaGTGTCTGATACCACAGGTG +
Preference number: 4 (lower is better)
Translates to: GLQLCLFLPALWNQLFCMVSPML*CLIPQV
Trigger: CACCTGTGGTATCAGACATCACAACATGGGGCTCAC...CATGCAGAAAAGCTGGTTCCATAATGCGGGAAGGAAGAGACAGAGTTGTAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369441.7
CDS-3UTR TCA 90 bp GCTCCAGGTGTTTGGGATGATTGGCAGGGAGTTCAACTTGCCAAAAGCTTGAGTCTGCTTTGTGACCATTaGAGGTCACATTTCCTTCCC +
Preference number: 4 (lower is better)
Translates to: APGVWDDWQGVQLAKSLSLLCDH*RSHFLP
Trigger: GGGAAGGAAATGTGACCTTCAATGGTCACAAAGCAG...ACTCAAGCTTTTGGCAAGTTGAACTCCCTGCCAATCATCCCAAACACCTGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR TCA 90 bp TCCCGCATTATGGAACCAGCTTTTCTGCATGAAAGGATTCGATCCTCAGGGGCTAGTCTGCCTCCTAGCTaGTCATACTTCAAGGTAGTG +
Preference number: 4 (lower is better)
Translates to: SRIMEPAFLHERIRSSGASLPPS*SYFKVV
Trigger: CACTACCTTGAAGTATGATCAGCTAGGAGGCAGACT...AGCCCCTGAGGATCGAATCCTTTCATGCAGAAAAGCTGGTTCCATAATGCGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369441.7
CDS-3UTR TCA 90 bp GTAACTAGCAGGTTCTTTTCTCGTAGAAACAATGCTTGTGTGATGGCATCCTTGCCTCAGTTCACTGTCTaGGGCCCCAGTGATGAGTCG +
Preference number: 4 (lower is better)
Translates to: VTSRFFSRRNNACVMASLPQFTV*GPSDES
Trigger: CGACTCATCACTGGGGCCTCAGACAGTGAACTGAGG...CAAGGATGCCATCACACAAGCATTGTTTCTACGAGAAAAGAACCTGCTAGTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369441.7
CDS-3UTR CCA 90 bp GCTCCAGGTGTTTGGGATGATTGGCAGGGAGTTCAACTTGCCAAAAGCTTGAGTTCCCTCAGGCAAAGCTaGAAACCACATCCTGATATC +
Preference number: 4 (lower is better)
Translates to: APGVWDDWQGVQLAKSLSSLRQS*KPHPDI
Trigger: GATATCAGGATGTGGTTTCCAGCTTTGCCTGAGGGA...ACTCAAGCTTTTGGCAAGTTGAACTCCCTGCCAATCATCCCAAACACCTGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR CCA 90 bp GCTCCAGGTGTTTGGGATGATTGGCAGGGAGTTCAACTTGCCAAAAGCTTGAGTTGTGAGGAATGGGGGTaGATTGCAGACAGTAACTGT +
Preference number: 4 (lower is better)
Translates to: APGVWDDWQGVQLAKSLSCEEWG*IADSNC
Trigger: ACAGTTACTGTCTGCAATCCACCCCCATTCCTCACA...ACTCAAGCTTTTGGCAAGTTGAACTCCCTGCCAATCATCCCAAACACCTGGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR CCA 90 bp GCTCCAGGTGTTTGGGATGATTGGCAGGGAGTTCAACTTGCCAAAAGCTTGAGTAGAAGTCTACCTGAATaGGCCATGTGTGAGGACAAG +
Preference number: 4 (lower is better)
Translates to: APGVWDDWQGVQLAKSLSRSLPE*AMCEDK
Trigger: CTTGTCCTCACACATGGCCCATTCAGGTAGACTTCT...ACTCAAGCTTTTGGCAAGTTGAACTCCCTGCCAATCATCCCAAACACCTGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR CCA 90 bp TCCCGCATTATGGAACCAGCTTTTCTGCATGAAAGGATTCGATCCTCAGGGGCTCTAGCTAGACCTTTTTaGCTGCCGATAACGCCAAAG +
Preference number: 4 (lower is better)
Translates to: SRIMEPAFLHERIRSSGALARPF*LPITPK
Trigger: CTTTGGCGTTATCGGCAGCCAAAAAGGTCTAGCTAG...AGCCCCTGAGGATCGAATCCTTTCATGCAGAAAAGCTGGTTCCATAATGCGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369441.7
3UTR CAA 72 bp GAGTCAGTTCCATGGCAAGCAAGAATCCTGCCTGTCTaGTCGACTGCAAGGTTTACAACTCTGTCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: ESVPWQARILPV*STARFTTLSLP
Trigger: AGGAAGAGACAGAGTTGTAAACCTTGCAGTCGACAAGACAGGCAGGATTCTTGCTTGCCATGGAACTGACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369441.7
CDS-3UTR TCA 90 bp ACACACACACACACACACACACACACACACACACACACGAGTGTATTAATTCCTGTAGGTACTGCTTGGTaGGCCCCATGTTGTGATGTC +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTHTHTSVLIPVGTAW*APCCDV
Trigger: GACATCACAACATGGGGCTCACCAAGCAGTACCTAC...AGGAATTAATACACTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR TCA 90 bp GGTTTACAACTCTGTCTCTTCCTTCCCGCATTATGGAACCAGCTTTTCTGCATGGAGTCGCTTTTCTTCTaGCAACAGAACCAACCCCCA +
Preference number: 4 (lower is better)
Translates to: GLQLCLFLPALWNQLFCMESLFF*QQNQPP
Trigger: TGGGGGTTGGTTCTGTTGTCAGAAGAAAAGCGACTC...CATGCAGAAAAGCTGGTTCCATAATGCGGGAAGGAAGAGACAGAGTTGTAAACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369441.7
CDS-3UTR TCA 90 bp GCTCCAGGTGTTTGGGATGATTGGCAGGGAGTTCAACTTGCCAAAAGCTTGAGTACTGGCACAAGCATTTaGTTGCTAGTGATCTGTCCA +
Preference number: 4 (lower is better)
Translates to: APGVWDDWQGVQLAKSLSTGTSI*LLVICP
Trigger: TGGACAGATCACTAGCAATCAAATGCTTGTGCCAGT...ACTCAAGCTTTTGGCAAGTTGAACTCCCTGCCAATCATCCCAAACACCTGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR TCA 90 bp GCTCCAGGTGTTTGGGATGATTGGCAGGGAGTTCAACTTGCCAAAAGCTTGAGTCTGAAAAGGCTGCATTaGGCAGGCTCATCATTTACA +
Preference number: 4 (lower is better)
Translates to: APGVWDDWQGVQLAKSLSLKRLH*AGSSFT
Trigger: TGTAAATGATGAGCCTGCTCAATGCAGCCTTTTCAG...ACTCAAGCTTTTGGCAAGTTGAACTCCCTGCCAATCATCCCAAACACCTGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR TCA 90 bp GCTCCAGGTGTTTGGGATGATTGGCAGGGAGTTCAACTTGCCAAAAGCTTGAGTAAGAGTTGGGCTCAGTaGCTGTTACACAATGTGTAC +
Preference number: 4 (lower is better)
Translates to: APGVWDDWQGVQLAKSLSKSWAQ*LLHNVY
Trigger: GTACACATTGTGTAACAGTCACTGAGCCCAACTCTT...ACTCAAGCTTTTGGCAAGTTGAACTCCCTGCCAATCATCCCAAACACCTGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR GCA 90 bp GCTCCAGGTGTTTGGGATGATTGGCAGGGAGTTCAACTTGCCAAAAGCTTGAGTCACACTGTCATCATGTaGAAAGAGAGACTTGTGGCA +
Preference number: 4 (lower is better)
Translates to: APGVWDDWQGVQLAKSLSHTVIM*KERLVA
Trigger: TGCCACAAGTCTCTCTTTGCACATGATGACAGTGTG...ACTCAAGCTTTTGGCAAGTTGAACTCCCTGCCAATCATCCCAAACACCTGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR CCA 90 bp CTTGTCGACTGCAAGGTTTACAACTCTGTCTCTTCCTTCCCGCATTATGGAACCACAGAGTCAGTTCCATaGCAAGCAAGAATCCTGCCT +
Preference number: 4 (lower is better)
Translates to: LVDCKVYNSVSSFPHYGTTESVP*QARILP
Trigger: AGGCAGGATTCTTGCTTGCCATGGAACTGACTCTGT...GGTTCCATAATGCGGGAAGGAAGAGACAGAGTTGTAAACCTTGCAGTCGACAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369441.7
CDS-3UTR CCA 90 bp GCTCCAGGTGTTTGGGATGATTGGCAGGGAGTTCAACTTGCCAAAAGCTTGAGTGACAAGAACTGGGAGTaGGGGAACAGTCAACATAAA +
Preference number: 4 (lower is better)
Translates to: APGVWDDWQGVQLAKSLSDKNWE*GNSQHK
Trigger: TTTATGTTGACTGTTCCCCCACTCCCAGTTCTTGTC...ACTCAAGCTTTTGGCAAGTTGAACTCCCTGCCAATCATCCCAAACACCTGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR TCA 90 bp GCTCCAGGTGTTTGGGATGATTGGCAGGGAGTTCAACTTGCCAAAAGCTTGAGTCAAGGATGGATTCAGTaGATACAATTCCACCAGGTT +
Preference number: 4 (lower is better)
Translates to: APGVWDDWQGVQLAKSLSQGWIQ*IQFHQV
Trigger: AACCTGGTGGAATTGTATTCACTGAATCCATCCTTG...ACTCAAGCTTTTGGCAAGTTGAACTCCCTGCCAATCATCCCAAACACCTGGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR TCA 90 bp ACACACACACACACACACACACACACACACACACACACGAGTGTATTAATTCCTGATCTTTTCCGGCAGTaGAGAAGAGGTGAGACTTGG +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTHTHTSVLIPDLFRQ*RRGETW
Trigger: CCAAGTCTCACCTCTTCTTCACTGCCGGAAAAGATC...AGGAATTAATACACTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR TCA 90 bp GCTCCAGGTGTTTGGGATGATTGGCAGGGAGTTCAACTTGCCAAAAGCTTGAGTTTTGTCATGGGACGATaGTACAACATAGTCTCCACT +
Preference number: 4 (lower is better)
Translates to: APGVWDDWQGVQLAKSLSFVMGR*YNIVST
Trigger: AGTGGAGACTATGTTGTATCATCGTCCCATGACAAA...ACTCAAGCTTTTGGCAAGTTGAACTCCCTGCCAATCATCCCAAACACCTGGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR TCA 90 bp AACTGCATATCACAGTGCTCCCAAAAAGCAGAGAAAAGTCATGACATTACAAGACCTGCCGGGTTCAAGTaGTTCTCCTGTCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: NCISQCSQKAEKSHDITRPAGFK*FSCLSL
Trigger: GAGGCTGAGACAGGAGAATCACTTGAACCCGGCAGG...TCTTGTAATGTCATGACTTTTCTCTGCTTTTTGGGAGCACTGTGATATGCAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR TCA 90 bp GCTCCAGGTGTTTGGGATGATTGGCAGGGAGTTCAACTTGCCAAAAGCTTGAGTAGGTTGGGTATTCACTaGATTATGCATGCATTCCTC +
Preference number: 4 (lower is better)
Translates to: APGVWDDWQGVQLAKSLSRLGIH*IMHAFL
Trigger: GAGGAATGCATGCATAATTCAGTGAATACCCAACCT...ACTCAAGCTTTTGGCAAGTTGAACTCCCTGCCAATCATCCCAAACACCTGGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR GCA 90 bp GCTCCAGGTGTTTGGGATGATTGGCAGGGAGTTCAACTTGCCAAAAGCTTGAGTAAAGGCACCATCCTCTaGCTCAAGAGTATCTTGTAT +
Preference number: 4 (lower is better)
Translates to: APGVWDDWQGVQLAKSLSKGTIL*LKSILY
Trigger: ATACAAGATACTCTTGAGGCAGAGGATGGTGCCTTT...ACTCAAGCTTTTGGCAAGTTGAACTCCCTGCCAATCATCCCAAACACCTGGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR GCA 90 bp ACACACACACACACACACACACACACACACACACACACGAGTGTATTAATTCCTCCATTAGGATGGGGTTaGTGGGAAGTGGAACCTCTT +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTHTHTSVLIPPLGWG*WEVEPL
Trigger: AAGAGGTTCCACTTCCCAGCAACCCCATCCTAATGG...AGGAATTAATACACTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR GCA 90 bp ATTTATTCCCTGCTAGAATATAAAGGGAACAACAAGCTTGAGCTGCAAGGCTCAGTAGGGGTGGGTCAGTaGCCCTACCACCTGCATTTT +
Preference number: 4 (lower is better)
Translates to: IYSLLEYKGNNKLELQGSVGVGQ*PYHLHF
Trigger: AAAATGCAGGTGGTAGGGGCACTGACCCACCCCTAC...TGAGCCTTGCAGCTCAAGCTTGTTGTTCCCTTTATATTCTAGCAGGGAATAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR GCA 90 bp GCTCCAGGTGTTTGGGATGATTGGCAGGGAGTTCAACTTGCCAAAAGCTTGAGTATGCATTATCCTGCCTaGCTATTCTCTTGCCTTCAT +
Preference number: 4 (lower is better)
Translates to: APGVWDDWQGVQLAKSLSMHYPA*LFSCLH
Trigger: ATGAAGGCAAGAGAATAGGCAGGCAGGATAATGCAT...ACTCAAGCTTTTGGCAAGTTGAACTCCCTGCCAATCATCCCAAACACCTGGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR CCA 90 bp TCCCGCATTATGGAACCAGCTTTTCTGCATGAAAGGATTCGATCCTCAGGGGCTAAGGAACTTGATGCTTaGCTAGCTAGACCTTTTTGG +
Preference number: 4 (lower is better)
Translates to: SRIMEPAFLHERIRSSGAKELDA*LARPFW
Trigger: CCAAAAAGGTCTAGCTAGCCAAGCATCAAGTTCCTT...AGCCCCTGAGGATCGAATCCTTTCATGCAGAAAAGCTGGTTCCATAATGCGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369441.7
CDS-3UTR TCA 90 bp ATTTATTCCCTGCTAGAATATAAAGGGAACAACAAGCTTGAGCTGCAAGGCTCACGCACATCACTGCGATaGCCCCCAATAGTGATTCTG +
Preference number: 4 (lower is better)
Translates to: IYSLLEYKGNNKLELQGSRTSLR*PPIVIL
Trigger: CAGAATCACTATTGGGGGTCATCGCAGTGATGTGCG...TGAGCCTTGCAGCTCAAGCTTGTTGTTCCCTTTATATTCTAGCAGGGAATAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR TCA 90 bp GCTCCAGGTGTTTGGGATGATTGGCAGGGAGTTCAACTTGCCAAAAGCTTGAGTCACTGTTTAATCTTATaGTCTTTTCCGGCAGTGAAG +
Preference number: 4 (lower is better)
Translates to: APGVWDDWQGVQLAKSLSHCLIL*SFPAVK
Trigger: CTTCACTGCCGGAAAAGATCATAAGATTAAACAGTG...ACTCAAGCTTTTGGCAAGTTGAACTCCCTGCCAATCATCCCAAACACCTGGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR TCA 90 bp ACACACACACACACACACACACACACACACACACACACGAGTGTATTAATTCCTCTGCCTAAACAACACTaGCTCCTTGGAAAGCACCTA +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTHTHTSVLIPLPKQH*LLGKHL
Trigger: TAGGTGCTTTCCAAGGAGTCAGTGTTGTTTAGGCAG...AGGAATTAATACACTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR TCA 90 bp ACACACACACACACACACACACACACACACACACACACGAGTGTATTAATTCCTTCTAACCCCCAAGCCTaGGCATGCAGAATTTGCATT +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTHTHTSVLIPSNPQA*ACRICI
Trigger: AATGCAAATTCTGCATGCTCAGGCTTGGGGGTTAGA...AGGAATTAATACACTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR GCA 90 bp GCTCCAGGTGTTTGGGATGATTGGCAGGGAGTTCAACTTGCCAAAAGCTTGAGTCGTATGCACTTAAAATaGTGTGACACTAATCACCTG +
Preference number: 4 (lower is better)
Translates to: APGVWDDWQGVQLAKSLSRMHLK*CDTNHL
Trigger: CAGGTGATTAGTGTCACAGCATTTTAAGTGCATACG...ACTCAAGCTTTTGGCAAGTTGAACTCCCTGCCAATCATCCCAAACACCTGGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR GCA 90 bp AAAGGACTTGAATATATGGTGATACTACCTTTAAGAACCTTAGCCCCATCTCAAGGAGTCTGGCTCTGTTaGCCAGACTGGAGTGCAGTG +
Preference number: 4 (lower is better)
Translates to: KGLEYMVILPLRTLAPSQGVWLC*PDWSAV
Trigger: CACTGCACTCCAGTCTGGGCAACAGAGCCAGACTCC...TTGAGATGGGGCTAAGGTTCTTAAAGGTAGTATCACCATATATTCAAGTCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR GCA 90 bp ACACACACACACACACACACACACACACACACACACACGAGTGTATTAATTCCTACCAACAGATACCATTaGTTTCCTGGGCACTGTCCT +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTHTHTSVLIPTNRYH*FPGHCP
Trigger: AGGACAGTGCCCAGGAAAGCAATGGTATCTGTTGGT...AGGAATTAATACACTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR GCA 90 bp CATATCTTTATTAAGATGAATCCAGGGTTATTGTGCAGGACATGTCAAAGGGGAGCAGCAGTGAACCACTaGAGATTCCTGACCCTGTGG +
Preference number: 4 (lower is better)
Translates to: HIFIKMNPGLLCRTCQRGAAVNH*RFLTLW
Trigger: CCACAGGGTCAGGAATCTGCAGTGGTTCACTGCTGC...TCCCCTTTGACATGTCCTGCACAATAACCCTGGATTCATCTTAATAAAGATATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR CCA 90 bp ACACACACACACACACACACACACACACACACACACACGAGTGTATTAATTCCTACAGAGTCAGTTCCATaGCAAGCAAGAATCCTGCCT +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTHTHTSVLIPTESVP*QARILP
Trigger: AGGCAGGATTCTTGCTTGCCATGGAACTGACTCTGT...AGGAATTAATACACTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR TCA 90 bp AACTGCATATCACAGTGCTCCCAAAAAGCAGAGAAAAGTCATGACATTACAAGAGTGAGCCCCATGTTGTaGTGTCTGATACCACAGGTG +
Preference number: 4 (lower is better)
Translates to: NCISQCSQKAEKSHDITRVSPML*CLIPQV
Trigger: CACCTGTGGTATCAGACATCACAACATGGGGCTCAC...TCTTGTAATGTCATGACTTTTCTCTGCTTTTTGGGAGCACTGTGATATGCAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR TCA 90 bp AAAGGACTTGAATATATGGTGATACTACCTTTAAGAACCTTAGCCCCATCTCAACCCCACTCAGGAGACTaGAGATTCGGATCGACCCAT +
Preference number: 4 (lower is better)
Translates to: KGLEYMVILPLRTLAPSQPHSGD*RFGSTH
Trigger: ATGGGTCGATCCGAATCTTCAGTCTCCTGAGTGGGG...TTGAGATGGGGCTAAGGTTCTTAAAGGTAGTATCACCATATATTCAAGTCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR TCA 90 bp ATTTATTCCCTGCTAGAATATAAAGGGAACAACAAGCTTGAGCTGCAAGGCTCACACAGAGGTGATGGCTaGATGTATGGGCAAGGAACA +
Preference number: 4 (lower is better)
Translates to: IYSLLEYKGNNKLELQGSHRGDG*MYGQGT
Trigger: TGTTCCTTGCCCATACATTCAGCCATCACCTCTGTG...TGAGCCTTGCAGCTCAAGCTTGTTGTTCCCTTTATATTCTAGCAGGGAATAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR GCA 90 bp TCAAAGGCACCATCCTCTGCCTCAAGAGTATCTTGTATTCCAGGAGAAGATCCTCAAGGTAGTGATAGCTaGTTTGTGACCATTGAAGGT +
Preference number: 4 (lower is better)
Translates to: SKAPSSASRVSCIPGEDPQGSDS*FVTIEG
Trigger: ACCTTCAATGGTCACAAAGCAGCTATCACTACCTTG...AGGATCTTCTCCTGGAATACAAGATACTCTTGAGGCAGAGGATGGTGCCTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369441.7
CDS-3UTR GCA 90 bp GTCTTGTCGACTGCAAGGTTTACAACTCTGTCTCTTCCTTCCCGCATTATGGAAAAAGGCACCATCCTCTaGCTCAAGAGTATCTTGTAT +
Preference number: 4 (lower is better)
Translates to: VLSTARFTTLSLPSRIMEKGTIL*LKSILY
Trigger: ATACAAGATACTCTTGAGGCAGAGGATGGTGCCTTT...TTCCATAATGCGGGAAGGAAGAGACAGAGTTGTAAACCTTGCAGTCGACAAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369441.7
CDS-3UTR GCA 90 bp GCTCCAGGTGTTTGGGATGATTGGCAGGGAGTTCAACTTGCCAAAAGCTTGAGTCATAATCCTCTCAGCTaGTTTCACTGTTTCAATAGT +
Preference number: 4 (lower is better)
Translates to: APGVWDDWQGVQLAKSLSHNPLS*FHCFNS
Trigger: ACTATTGAAACAGTGAAAGCAGCTGAGAGGATTATG...ACTCAAGCTTTTGGCAAGTTGAACTCCCTGCCAATCATCCCAAACACCTGGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR GCA 90 bp ACACACACACACACACACACACACACACACACACACACGAGTGTATTAATTCCTGCCTGCCTATTCTCTTaGCTTCATAGTTATGCCTTC +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTHTHTSVLIPACLFS*LHSYAF
Trigger: GAAGGCATAACTATGAAGGCAAGAGAATAGGCAGGC...AGGAATTAATACACTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR GCA 90 bp ACACACACACACACACACACACACACACACACACACACGAGTGTATTAATTCCTAAAACATACCAGGGCTaGTTGGATCCCAAAAACCTC +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTHTHTSVLIPKTYQG*LDPKNL
Trigger: GAGGTTTTTGGGATCCAAGCAGCCCTGGTATGTTTT...AGGAATTAATACACTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR CCA 90 bp ACACACACACACACACACACACACACACACACACACACGAGTGTATTAATTCCTTTCCTTCCCGCATTATaGAACCAGCTTTTCTGCATG +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTHTHTSVLIPFLPAL*NQLFCM
Trigger: CATGCAGAAAAGCTGGTTCCATAATGCGGGAAGGAA...AGGAATTAATACACTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR CCA 90 bp AACTGCATATCACAGTGCTCCCAAAAAGCAGAGAAAAGTCATGACATTACAAGAAAAGCCACGCTGATCTaGAGAGAGGGACATGGACCA +
Preference number: 4 (lower is better)
Translates to: NCISQCSQKAEKSHDITRKATLI*REGHGP
Trigger: TGGTCCATGTCCCTCTCTCCAGATCAGCGTGGCTTT...TCTTGTAATGTCATGACTTTTCTCTGCTTTTTGGGAGCACTGTGATATGCAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR CCA 90 bp ATTTATTCCCTGCTAGAATATAAAGGGAACAACAAGCTTGAGCTGCAAGGCTCATTAGGATGGGGTTGCTaGGAAGTGGAACCTCTTTCC +
Preference number: 4 (lower is better)
Translates to: IYSLLEYKGNNKLELQGSLGWGC*EVEPLS
Trigger: GGAAAGAGGTTCCACTTCCCAGCAACCCCATCCTAA...TGAGCCTTGCAGCTCAAGCTTGTTGTTCCCTTTATATTCTAGCAGGGAATAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR CCA 90 bp ACACACACACACACACACACACACACACACACACACACGAGTGTATTAATTCCTGAAGCCATTGATGGATaGAAGAAAGAGGACATCGAG +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTHTHTSVLIPEAIDG*KKEDIE
Trigger: CTCGATGTCCTCTTTCTTCCATCCATCAATGGCTTC...AGGAATTAATACACTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349139.6
3UTR CAA 72 bp TTTTCTCGTAGAAACAATGCTTGTGTGATGGCATCCTaGTGCCCCTTTAGACGGTACAGACCACTTTCATTG +
Preference number: 4 (lower is better)
Translates to: FSRRNNACVMAS*CPFRRYRPLSL
Trigger: CAATGAAAGTGGTCTGTACCGTCTAAAGGGGCACAAGGATGCCATCACACAAGCATTGTTTCTACGAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369441.7
CDS-3UTR TCA 90 bp TTCCCACTAGTAACTAGCAGGTTCTTTTCTCGTAGAAACAATGCTTGTGTGATGCTGCTTTGTGACCATTaGAGGTCACATTTCCTTCCC +
Preference number: 4 (lower is better)
Translates to: FPLVTSRFFSRRNNACVMLLCDH*RSHFLP
Trigger: GGGAAGGAAATGTGACCTTCAATGGTCACAAAGCAG...CATCACACAAGCATTGTTTCTACGAGAAAAGAACCTGCTAGTTACTAGTGGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369441.7
CDS-3UTR TCA 90 bp ATTTATTCCCTGCTAGAATATAAAGGGAACAACAAGCTTGAGCTGCAAGGCTCAAGTCTGCCTCCTAGCTaGTCATACTTCAAGGTAGTG +
Preference number: 4 (lower is better)
Translates to: IYSLLEYKGNNKLELQGSSLPPS*SYFKVV
Trigger: CACTACCTTGAAGTATGATCAGCTAGGAGGCAGACT...TGAGCCTTGCAGCTCAAGCTTGTTGTTCCCTTTATATTCTAGCAGGGAATAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR TCA 90 bp GTATCTTTCCCACTAGTAACTAGCAGGTTCTTTTCTCGTAGAAACAATGCTTGTGAAACAATGCTTGTGTaGTGGCATCCTTGTGCCCCT +
Preference number: 4 (lower is better)
Translates to: VSFPLVTSRFFSRRNNACETMLV*WHPCAP
Trigger: AGGGGCACAAGGATGCCATCACACAAGCATTGTTTC...ACAAGCATTGTTTCTACGAGAAAAGAACCTGCTAGTTACTAGTGGGAAAGATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369441.7
CDS-3UTR TCA 90 bp GTAACTAGCAGGTTCTTTTCTCGTAGAAACAATGCTTGTGTGATGGCATCCTTGGTTTTAAAGCAGTGCTaGGTATCAAGGTCCCACCAT +
Preference number: 4 (lower is better)
Translates to: VTSRFFSRRNNACVMASLVLKQC*VSRSHH
Trigger: ATGGTGGGACCTTGATACTCAGCACTGCTTTAAAAC...CAAGGATGCCATCACACAAGCATTGTTTCTACGAGAAAAGAACCTGCTAGTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369441.7
CDS-3UTR TCA 90 bp AACTGCATATCACAGTGCTCCCAAAAAGCAGAGAAAAGTCATGACATTACAAGAGAGTCGCTTTTCTTCTaGCAACAGAACCAACCCCCA +
Preference number: 4 (lower is better)
Translates to: NCISQCSQKAEKSHDITRESLFF*QQNQPP
Trigger: TGGGGGTTGGTTCTGTTGTCAGAAGAAAAGCGACTC...TCTTGTAATGTCATGACTTTTCTCTGCTTTTTGGGAGCACTGTGATATGCAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR TCA 90 bp ATTTATTCCCTGCTAGAATATAAAGGGAACAACAAGCTTGAGCTGCAAGGCTCAACCAGCTTTTCTGCATaGAAGGATTCGATCCTCAGG +
Preference number: 4 (lower is better)
Translates to: IYSLLEYKGNNKLELQGSTSFSA*KDSILR
Trigger: CCTGAGGATCGAATCCTTTCATGCAGAAAAGCTGGT...TGAGCCTTGCAGCTCAAGCTTGTTGTTCCCTTTATATTCTAGCAGGGAATAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR TCA 90 bp TTCCCACTAGTAACTAGCAGGTTCTTTTCTCGTAGAAACAATGCTTGTGTGATGACCAGCTTTTCTGCATaGAAGGATTCGATCCTCAGG +
Preference number: 4 (lower is better)
Translates to: FPLVTSRFFSRRNNACVMTSFSA*KDSILR
Trigger: CCTGAGGATCGAATCCTTTCATGCAGAAAAGCTGGT...CATCACACAAGCATTGTTTCTACGAGAAAAGAACCTGCTAGTTACTAGTGGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369441.7
CDS-3UTR TCA 90 bp TTGGCTAGGTTCTGTACATGTCACTTTATCATAAAAGTTCTCCTTCTCTTCGATCGGAGCCAGTTGCTATaGGTGCTCCATCATGAGAGA +
Preference number: 4 (lower is better)
Translates to: LARFCTCHFIIKVLLLFDRSQLL*VLHHER
Trigger: TCTCTCATGATGGAGCACTCATAGCAACTGGCTCCG...ATCGAAGAGAAGGAGAACTTTTATGATAAAGTGACATGTACAGAACCTAGCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR TCA 90 bp CATATCTTTATTAAGATGAATCCAGGGTTATTGTGCAGGACATGTCAAAGGGGAATAAGTACCACAGATTaGGGTCTGCGGCTGTGGTTG +
Preference number: 4 (lower is better)
Translates to: HIFIKMNPGLLCRTCQRGISTTD*GLRLWL
Trigger: CAACCACAGCCGCAGACCTCAATCTGTGGTACTTAT...TCCCCTTTGACATGTCCTGCACAATAACCCTGGATTCATCTTAATAAAGATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR TCA 90 bp ATTTATTCCCTGCTAGAATATAAAGGGAACAACAAGCTTGAGCTGCAAGGCTCAACCTCCCTCTCTTTCTaGAGACTAATCTGGCCTGAA +
Preference number: 4 (lower is better)
Translates to: IYSLLEYKGNNKLELQGSTSLSF*RLIWPE
Trigger: TTCAGGCCAGATTAGTCTTCAGAAAGAGAGGGAGGT...TGAGCCTTGCAGCTCAAGCTTGTTGTTCCCTTTATATTCTAGCAGGGAATAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR TCA 90 bp AACTGCATATCACAGTGCTCCCAAAAAGCAGAGAAAAGTCATGACATTACAAGATTACAGTGTCAACAATaGTCTGTCCCTCTCCCCACC +
Preference number: 4 (lower is better)
Translates to: NCISQCSQKAEKSHDITRLQCQQ*SVPLPT
Trigger: GGTGGGGAGAGGGACAGATCATTGTTGACACTGTAA...TCTTGTAATGTCATGACTTTTCTCTGCTTTTTGGGAGCACTGTGATATGCAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR TCA 90 bp AACTGCATATCACAGTGCTCCCAAAAAGCAGAGAAAAGTCATGACATTACAAGATCCAGGTGTTTGGGATaGTTGGCAGGGAGTTCAACT +
Preference number: 4 (lower is better)
Translates to: NCISQCSQKAEKSHDITRSRCLG*LAGSST
Trigger: AGTTGAACTCCCTGCCAATCATCCCAAACACCTGGA...TCTTGTAATGTCATGACTTTTCTCTGCTTTTTGGGAGCACTGTGATATGCAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR GCA 90 bp CATATCTTTATTAAGATGAATCCAGGGTTATTGTGCAGGACATGTCAAAGGGGAGTGATGGCATCCTTGTaGCCCTTTAGACGGTACAGA +
Preference number: 4 (lower is better)
Translates to: HIFIKMNPGLLCRTCQRGVMASL*PFRRYR
Trigger: TCTGTACCGTCTAAAGGGGCACAAGGATGCCATCAC...TCCCCTTTGACATGTCCTGCACAATAACCCTGGATTCATCTTAATAAAGATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR GCA 90 bp ACACACACACACACACACACACACACACACACACACACGAGTGTATTAATTCCTTTTGACAGATTTATCTaGACCACCTGTCACAAAGCC +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTHTHTSVLIPFDRFI*TTCHKA
Trigger: GGCTTTGTGACAGGTGGTGCAGATAAATCTGTCAAA...AGGAATTAATACACTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR GCA 90 bp CATATCTTTATTAAGATGAATCCAGGGTTATTGTGCAGGACATGTCAAAGGGGAATCAGCGGAGCCAGTTaGTATGAGTGCTCCATCATG +
Preference number: 4 (lower is better)
Translates to: HIFIKMNPGLLCRTCQRGISGAS*YECSIM
Trigger: CATGATGGAGCACTCATAGCAACTGGCTCCGCTGAT...TCCCCTTTGACATGTCCTGCACAATAACCCTGGATTCATCTTAATAAAGATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR GCA 90 bp GCTCCAGGTGTTTGGGATGATTGGCAGGGAGTTCAACTTGCCAAAAGCTTGAGTGTGTTCAAATTTGTCTaGATCCCACTGTTTAATCTT +
Preference number: 4 (lower is better)
Translates to: APGVWDDWQGVQLAKSLSVFKFV*IPLFNL
Trigger: AAGATTAAACAGTGGGATGCAGACAAATTTGAACAC...ACTCAAGCTTTTGGCAAGTTGAACTCCCTGCCAATCATCCCAAACACCTGGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR GCA 90 bp ATTTATTCCCTGCTAGAATATAAAGGGAACAACAAGCTTGAGCTGCAAGGCTCAATCGCCCCAGTAAACTaGATATCACAGTGCTCCCAA +
Preference number: 4 (lower is better)
Translates to: IYSLLEYKGNNKLELQGSIAPVN*ISQCSQ
Trigger: TTGGGAGCACTGTGATATGCAGTTTACTGGGGCGAT...TGAGCCTTGCAGCTCAAGCTTGTTGTTCCCTTTATATTCTAGCAGGGAATAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR GCA 90 bp AAAGGACTTGAATATATGGTGATACTACCTTTAAGAACCTTAGCCCCATCTCAAACTGCAATCTCCGCCTaGCGGGTTCAAGTGATTCTC +
Preference number: 4 (lower is better)
Translates to: KGLEYMVILPLRTLAPSQTAISA*RVQVIL
Trigger: GAGAATCACTTGAACCCGGCAGGCGGAGATTGCAGT...TTGAGATGGGGCTAAGGTTCTTAAAGGTAGTATCACCATATATTCAAGTCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR GCA 90 bp CATATCTTTATTAAGATGAATCCAGGGTTATTGTGCAGGACATGTCAAAGGGGAGGTGGCAGGAATAGCTaGCTAAACAACACTGACTCC +
Preference number: 4 (lower is better)
Translates to: HIFIKMNPGLLCRTCQRGGGRNS*LNNTDS
Trigger: GGAGTCAGTGTTGTTTAGGCAGCTATTCCTGCCACC...TCCCCTTTGACATGTCCTGCACAATAACCCTGGATTCATCTTAATAAAGATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR CCA 90 bp CATATCTTTATTAAGATGAATCCAGGGTTATTGTGCAGGACATGTCAAAGGGGACTGGAGAGAGGGACATaGACCACAAAGCTCCATCAT +
Preference number: 4 (lower is better)
Translates to: HIFIKMNPGLLCRTCQRGLERGT*TTKLHH
Trigger: ATGATGGAGCTTTGTGGTCCATGTCCCTCTCTCCAG...TCCCCTTTGACATGTCCTGCACAATAACCCTGGATTCATCTTAATAAAGATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR CCA 90 bp AACTGCATATCACAGTGCTCCCAAAAAGCAGAGAAAAGTCATGACATTACAAGACAACATAGTCTCCACTaGGGCTTACAGCCAAACACC +
Preference number: 4 (lower is better)
Translates to: NCISQCSQKAEKSHDITRQHSLH*GLQPNT
Trigger: GGTGTTTGGCTGTAAGCCCCAGTGGAGACTATGTTG...TCTTGTAATGTCATGACTTTTCTCTGCTTTTTGGGAGCACTGTGATATGCAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR CCA 90 bp AAAGGACTTGAATATATGGTGATACTACCTTTAAGAACCTTAGCCCCATCTCAACCTGGAACTGCTGGTTaGTCTTCTTTGGCCACACTC +
Preference number: 4 (lower is better)
Translates to: KGLEYMVILPLRTLAPSQPGTAG*SSLATL
Trigger: GAGTGTGGCCAAAGAAGACCAACCAGCAGTTCCAGG...TTGAGATGGGGCTAAGGTTCTTAAAGGTAGTATCACCATATATTCAAGTCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR CCA 90 bp ATTTATTCCCTGCTAGAATATAAAGGGAACAACAAGCTTGAGCTGCAAGGCTCACATAAGCCATTAGGATaGGGTTGCTGGGAAGTGGAA +
Preference number: 4 (lower is better)
Translates to: IYSLLEYKGNNKLELQGSHKPLG*GCWEVE
Trigger: TTCCACTTCCCAGCAACCCCATCCTAATGGCTTATG...TGAGCCTTGCAGCTCAAGCTTGTTGTTCCCTTTATATTCTAGCAGGGAATAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR CCA 90 bp ACACACACACACACACACACACACACACACACACACACGAGTGTATTAATTCCTTTAAATTGTGAGGAATaGGGGTGGATTGCAGACAGT +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTHTHTSVLIPLNCEE*GWIADS
Trigger: ACTGTCTGCAATCCACCCCCATTCCTCACAATTTAA...AGGAATTAATACACTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR CCA 90 bp ATTTATTCCCTGCTAGAATATAAAGGGAACAACAAGCTTGAGCTGCAAGGCTCACAAGGAACAGAAATCTaGAGTCGGTTTAGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: IYSLLEYKGNNKLELQGSQGTEI*SRFREQ
Trigger: CTGCTCCCTAAACCGACTCCAGATTTCTGTTCCTTG...TGAGCCTTGCAGCTCAAGCTTGTTGTTCCCTTTATATTCTAGCAGGGAATAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR CCA 90 bp GCTCCAGGTGTTTGGGATGATTGGCAGGGAGTTCAACTTGCCAAAAGCTTGAGTTCAACTTCAAAGTTTTaGGCTGAGGTAATGAATCAT +
Preference number: 4 (lower is better)
Translates to: APGVWDDWQGVQLAKSLSSTSKF*AEVMNH
Trigger: ATGATTCATTACCTCAGCCCAAAACTTTGAAGTTGA...ACTCAAGCTTTTGGCAAGTTGAACTCCCTGCCAATCATCCCAAACACCTGGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR TCA 90 bp ATTTATTCCCTGCTAGAATATAAAGGGAACAACAAGCTTGAGCTGCAAGGCTCATCCTTAAGTCCCAGATaGAAACGTGTTCACAAGCTG +
Preference number: 4 (lower is better)
Translates to: IYSLLEYKGNNKLELQGSSLSPR*KRVHKL
Trigger: CAGCTTGTGAACACGTTTTCATCTGGGACTTAAGGA...TGAGCCTTGCAGCTCAAGCTTGTTGTTCCCTTTATATTCTAGCAGGGAATAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR TCA 90 bp ATTTATTCCCTGCTAGAATATAAAGGGAACAACAAGCTTGAGCTGCAAGGCTCACAGGAGAAGATCCTTTaGTTTTCTTGGGGTCTGGTT +
Preference number: 4 (lower is better)
Translates to: IYSLLEYKGNNKLELQGSQEKIL*FSWGLV
Trigger: AACCAGACCCCAAGAAAATCAAAGGATCTTCTCCTG...TGAGCCTTGCAGCTCAAGCTTGTTGTTCCCTTTATATTCTAGCAGGGAATAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR TCA 90 bp AAAGGACTTGAATATATGGTGATACTACCTTTAAGAACCTTAGCCCCATCTCAACCTCGCATTCCCTCTTaGGATAATCAAGACCAGCCA +
Preference number: 4 (lower is better)
Translates to: KGLEYMVILPLRTLAPSQPRIPS*DNQDQP
Trigger: TGGCTGGTCTTGATTATCTCAAGAGGGAATGCGAGG...TTGAGATGGGGCTAAGGTTCTTAAAGGTAGTATCACCATATATTCAAGTCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR TCA 90 bp AAAGGACTTGAATATATGGTGATACTACCTTTAAGAACCTTAGCCCCATCTCAAAGGGAACAACAAGCTTaGGCTGCAAGGCTCAAGCTT +
Preference number: 4 (lower is better)
Translates to: KGLEYMVILPLRTLAPSQREQQA*AARLKL
Trigger: AAGCTTGAGCCTTGCAGCTCAAGCTTGTTGTTCCCT...TTGAGATGGGGCTAAGGTTCTTAAAGGTAGTATCACCATATATTCAAGTCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR TCA 90 bp ACACACACACACACACACACACACACACACACACACACGAGTGTATTAATTCCTGCACTATCAGGCTTTTaGGTTATAAATGGTGGCAAA +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTHTHTSVLIPALSGF*VINGGK
Trigger: TTTGCCACCATTTATAACTCAAAAGCCTGATAGTGC...AGGAATTAATACACTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR TCA 90 bp CATATCTTTATTAAGATGAATCCAGGGTTATTGTGCAGGACATGTCAAAGGGGAAAGACTAATCTGGCCTaGAAAGGCTGCATTGAGCAG +
Preference number: 4 (lower is better)
Translates to: HIFIKMNPGLLCRTCQRGKTNLA*KGCIEQ
Trigger: CTGCTCAATGCAGCCTTTTCAGGCCAGATTAGTCTT...TCCCCTTTGACATGTCCTGCACAATAACCCTGGATTCATCTTAATAAAGATATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR TCA 90 bp CATATCTTTATTAAGATGAATCCAGGGTTATTGTGCAGGACATGTCAAAGGGGATCCTGGCTAACTTGGTaGAACCCCGTCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: HIFIKMNPGLLCRTCQRGSWLTW*NPVSTK
Trigger: TTTAGTAGAGACGGGGTTTCACCAAGTTAGCCAGGA...TCCCCTTTGACATGTCCTGCACAATAACCCTGGATTCATCTTAATAAAGATATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR GCA 90 bp AAAGGACTTGAATATATGGTGATACTACCTTTAAGAACCTTAGCCCCATCTCAAACCCAGATGCCAGTCTaGCTCCTAGCTGATCATACT +
Preference number: 4 (lower is better)
Translates to: KGLEYMVILPLRTLAPSQTQMPV*LLADHT
Trigger: AGTATGATCAGCTAGGAGGCAGACTGGCATCTGGGT...TTGAGATGGGGCTAAGGTTCTTAAAGGTAGTATCACCATATATTCAAGTCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR GCA 90 bp AAAGGACTTGAATATATGGTGATACTACCTTTAAGAACCTTAGCCCCATCTCAAGGCAAGCAAGAATCCTaGCTGTCTTGTCGACTGCAA +
Preference number: 4 (lower is better)
Translates to: KGLEYMVILPLRTLAPSQGKQES*LSCRLQ
Trigger: TTGCAGTCGACAAGACAGGCAGGATTCTTGCTTGCC...TTGAGATGGGGCTAAGGTTCTTAAAGGTAGTATCACCATATATTCAAGTCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR GCA 90 bp ATTTATTCCCTGCTAGAATATAAAGGGAACAACAAGCTTGAGCTGCAAGGCTCACAAAGCTCCATCATGTaGATCTATTGTCTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: IYSLLEYKGNNKLELQGSQSSIM*IYCLQQ
Trigger: CTGCTGGAGACAATAGATGCACATGATGGAGCTTTG...TGAGCCTTGCAGCTCAAGCTTGTTGTTCCCTTTATATTCTAGCAGGGAATAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR GCA 90 bp AAAGGACTTGAATATATGGTGATACTACCTTTAAGAACCTTAGCCCCATCTCAAACAGCCACCTCCTGTTaGTATGCAGTGAGCTCAAGT +
Preference number: 4 (lower is better)
Translates to: KGLEYMVILPLRTLAPSQTATSC*YAVSSS
Trigger: ACTTGAGCTCACTGCATAGCAACAGGAGGTGGCTGT...TTGAGATGGGGCTAAGGTTCTTAAAGGTAGTATCACCATATATTCAAGTCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR CCA 90 bp ATTTATTCCCTGCTAGAATATAAAGGGAACAACAAGCTTGAGCTGCAAGGCTCACTGGTTGGTCTTCTTTaGCCACACTCTCCTCATATT +
Preference number: 4 (lower is better)
Translates to: IYSLLEYKGNNKLELQGSLVGLL*PHSPHI
Trigger: AATATGAGGAGAGTGTGGCCAAAGAAGACCAACCAG...TGAGCCTTGCAGCTCAAGCTTGTTGTTCCCTTTATATTCTAGCAGGGAATAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR CCA 90 bp AACTGCATATCACAGTGCTCCCAAAAAGCAGAGAAAAGTCATGACATTACAAGACATACCAGGGCTGCTTaGATCCCAAAAACCTCAGAA +
Preference number: 4 (lower is better)
Translates to: NCISQCSQKAEKSHDITRHTRAA*IPKTSE
Trigger: TTCTGAGGTTTTTGGGATCCAAGCAGCCCTGGTATG...TCTTGTAATGTCATGACTTTTCTCTGCTTTTTGGGAGCACTGTGATATGCAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR CCA 90 bp TTGGCTAGGTTCTGTACATGTCACTTTATCATAAAAGTTCTCCTTCTCTTCGATTGTGAGGACAAGAACTaGGAGTGGGGGAACAGTCAA +
Preference number: 4 (lower is better)
Translates to: LARFCTCHFIIKVLLLFDCEDKN*EWGNSQ
Trigger: TTGACTGTTCCCCCACTCCCAGTTCTTGTCCTCACA...ATCGAAGAGAAGGAGAACTTTTATGATAAAGTGACATGTACAGAACCTAGCCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR CCA 90 bp TTGGCTAGGTTCTGTACATGTCACTTTATCATAAAAGTTCTCCTTCTCTTCGATGGTGTTTGGGATGATTaGCAGGGAGTTCAACTTGCC +
Preference number: 4 (lower is better)
Translates to: LARFCTCHFIIKVLLLFDGVWDD*QGVQLA
Trigger: GGCAAGTTGAACTCCCTGCCAATCATCCCAAACACC...ATCGAAGAGAAGGAGAACTTTTATGATAAAGTGACATGTACAGAACCTAGCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
3UTR CAA 72 bp AAAAGCATGAAATCTGATGTAGATATGGTTTGGGGCTaGACCATACTGATGGCTCCTTATAGAAAGCCAGTC +
Preference number: 4 (lower is better)
Translates to: KSMKSDVDMVWG*TILMAPYRKPV
Trigger: GACTGGCTTTCTATAAGGAGCCATCAGTATGGTCAAGCCCCAAACCATATCTACATCAGATTTCATGCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR TCA 90 bp CATATCTTTATTAAGATGAATCCAGGGTTATTGTGCAGGACATGTCAAAGGGGAGGAATCAGCTGCAGCTaGAAGAACAGCAATATTGTC +
Preference number: 4 (lower is better)
Translates to: HIFIKMNPGLLCRTCQRGGISCS*KNSNIV
Trigger: GACAATATTGCTGTTCTTTCAGCTGCAGCTGATTCC...TCCCCTTTGACATGTCCTGCACAATAACCCTGGATTCATCTTAATAAAGATATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR TCA 90 bp AACTGCATATCACAGTGCTCCCAAAAAGCAGAGAAAAGTCATGACATTACAAGACTGGAAACCACATCCTaGTATCATCTGCAATGCGAT +
Preference number: 4 (lower is better)
Translates to: NCISQCSQKAEKSHDITRLETTS*YHLQCD
Trigger: ATCGCATTGCAGATGATATCAGGATGTGGTTTCCAG...TCTTGTAATGTCATGACTTTTCTCTGCTTTTTGGGAGCACTGTGATATGCAGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR TCA 90 bp ACACACACACACACACACACACACACACACACACACACGAGTGTATTAATTCCTAGCAGAGAAAAGTCATaGCATTACAAGAAAAAGCTG +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTHTHTSVLIPSREKS*HYKKKL
Trigger: CAGCTTTTTCTTGTAATGTCATGACTTTTCTCTGCT...AGGAATTAATACACTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR TCA 90 bp CATATCTTTATTAAGATGAATCCAGGGTTATTGTGCAGGACATGTCAAAGGGGATACATGTTTGTAGGCTaGAGAGAGTGGAGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: HIFIKMNPGLLCRTCQRGYMFVG*REWSRR
Trigger: TCTTCTGCTCCACTCTCTTCAGCCTACAAACATGTA...TCCCCTTTGACATGTCCTGCACAATAACCCTGGATTCATCTTAATAAAGATATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR TCA 90 bp AAAGGACTTGAATATATGGTGATACTACCTTTAAGAACCTTAGCCCCATCTCAATCGTTTACACAGAGGTaGTGGCTGAATGTATGGGCA +
Preference number: 4 (lower is better)
Translates to: KGLEYMVILPLRTLAPSQSFTQR*WLNVWA
Trigger: TGCCCATACATTCAGCCATCACCTCTGTGTAAACGA...TTGAGATGGGGCTAAGGTTCTTAAAGGTAGTATCACCATATATTCAAGTCCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR TCA 90 bp AAAGGACTTGAATATATGGTGATACTACCTTTAAGAACCTTAGCCCCATCTCAAAAAGAGGGACATGAATaGAAGACATGGTGGGGGAAG +
Preference number: 4 (lower is better)
Translates to: KGLEYMVILPLRTLAPSQKEGHE*KTWWGK
Trigger: CTTCCCCCACCATGTCTTTCATTCATGTCCCTCTTT...TTGAGATGGGGCTAAGGTTCTTAAAGGTAGTATCACCATATATTCAAGTCCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR TCA 90 bp TTGGCTAGGTTCTGTACATGTCACTTTATCATAAAAGTTCTCCTTCTCTTCGATCTTTCTCCAGTGGCATaGATTGTGTGCTGCTTGTGT +
Preference number: 4 (lower is better)
Translates to: LARFCTCHFIIKVLLLFDLSPVA*IVCCLC
Trigger: ACACAAGCAGCACACAATTCATGCCACTGGAGAAAG...ATCGAAGAGAAGGAGAACTTTTATGATAAAGTGACATGTACAGAACCTAGCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR GCA 90 bp CATATCTTTATTAAGATGAATCCAGGGTTATTGTGCAGGACATGTCAAAGGGGATTCACAAGCTGGTACTaGCACATAACGTCCTTTCTC +
Preference number: 4 (lower is better)
Translates to: HIFIKMNPGLLCRTCQRGFTSWY*HITSFL
Trigger: GAGAAAGGACGTTATGTGGCAGTACCAGCTTGTGAA...TCCCCTTTGACATGTCCTGCACAATAACCCTGGATTCATCTTAATAAAGATATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR GCA 90 bp ATTTATTCCCTGCTAGAATATAAAGGGAACAACAAGCTTGAGCTGCAAGGCTCAATTGTGCGAATACACTaGAGTGTAGACCTGTTCCAT +
Preference number: 4 (lower is better)
Translates to: IYSLLEYKGNNKLELQGSIVRIH*SVDLFH
Trigger: ATGGAACAGGTCTACACTGCAGTGTATTCGCACAAT...TGAGCCTTGCAGCTCAAGCTTGTTGTTCCCTTTATATTCTAGCAGGGAATAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR GCA 90 bp TTGGCTAGGTTCTGTACATGTCACTTTATCATAAAAGTTCTCCTTCTCTTCGATGCCAGTTGCTATGAGTaGTCCATCATGAGAGATGTC +
Preference number: 4 (lower is better)
Translates to: LARFCTCHFIIKVLLLFDASCYE*SIMRDV
Trigger: GACATCTCTCATGATGGAGCACTCATAGCAACTGGC...ATCGAAGAGAAGGAGAACTTTTATGATAAAGTGACATGTACAGAACCTAGCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR GCA 90 bp ACACACACACACACACACACACACACACACACACACACGAGTGTATTAATTCCTGTGTTCCTTCATTTTTaGAGTTTCTTCTCGGTACAA +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTHTHTSVLIPVFLHF*SFFSVQ
Trigger: TTGTACCGAGAAGAAACTGCAAAAATGAAGGAACAC...AGGAATTAATACACTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR GCA 90 bp AACTGCATATCACAGTGCTCCCAAAAAGCAGAGAAAAGTCATGACATTACAAGACTGAAGGTGAGATACTaGCATAAGCCATTAGGATGG +
Preference number: 4 (lower is better)
Translates to: NCISQCSQKAEKSHDITRLKVRY*HKPLGW
Trigger: CCATCCTAATGGCTTATGGCAGTATCTCACCTTCAG...TCTTGTAATGTCATGACTTTTCTCTGCTTTTTGGGAGCACTGTGATATGCAGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR GCA 90 bp ACACACACACACACACACACACACACACACACACACACGAGTGTATTAATTCCTTATACAGACATAACTTaGAGAAGGTTAAGTCTGAGG +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTHTHTSVLIPYTDIT*RRLSLR
Trigger: CCTCAGACTTAACCTTCTGCAAGTTATGTCTGTATA...AGGAATTAATACACTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR GCA 90 bp AACTGCATATCACAGTGCTCCCAAAAAGCAGAGAAAAGTCATGACATTACAAGAGGAAAGCACCTAGAATaGATTATCCTGCCTGCCTAT +
Preference number: 4 (lower is better)
Translates to: NCISQCSQKAEKSHDITRGKHLE*IILPAY
Trigger: ATAGGCAGGCAGGATAATGCATTCTAGGTGCTTTCC...TCTTGTAATGTCATGACTTTTCTCTGCTTTTTGGGAGCACTGTGATATGCAGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR GCA 90 bp AACTGCATATCACAGTGCTCCCAAAAAGCAGAGAAAAGTCATGACATTACAAGAAATCCAGGGTTATTGTaGAGGACATGTCAAAGGGGA +
Preference number: 4 (lower is better)
Translates to: NCISQCSQKAEKSHDITRNPGLL*RTCQRG
Trigger: TCCCCTTTGACATGTCCTGCACAATAACCCTGGATT...TCTTGTAATGTCATGACTTTTCTCTGCTTTTTGGGAGCACTGTGATATGCAGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR CCA 90 bp TTGGCTAGGTTCTGTACATGTCACTTTATCATAAAAGTTCTCCTTCTCTTCGATAACGTGTTCACAAGCTaGTACTGCCACATAACGTCC +
Preference number: 4 (lower is better)
Translates to: LARFCTCHFIIKVLLLFDNVFTS*YCHITS
Trigger: GGACGTTATGTGGCAGTACCAGCTTGTGAACACGTT...ATCGAAGAGAAGGAGAACTTTTATGATAAAGTGACATGTACAGAACCTAGCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR CCA 90 bp CATATCTTTATTAAGATGAATCCAGGGTTATTGTGCAGGACATGTCAAAGGGGACATACCTCAGTCCGGTaGCCAACCATTGTTTTAAAG +
Preference number: 4 (lower is better)
Translates to: HIFIKMNPGLLCRTCQRGHTSVR*PTIVLK
Trigger: CTTTAAAACAATGGTTGGCCACCGGACTGAGGTATG...TCCCCTTTGACATGTCCTGCACAATAACCCTGGATTCATCTTAATAAAGATATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR CCA 90 bp AAAGGACTTGAATATATGGTGATACTACCTTTAAGAACCTTAGCCCCATCTCAAGCAAAGAGAGACTTGTaGCAGTCCCCAAAGTCCAAA +
Preference number: 4 (lower is better)
Translates to: KGLEYMVILPLRTLAPSQAKRDL*QSPKSK
Trigger: TTTGGACTTTGGGGACTGCCACAAGTCTCTCTTTGC...TTGAGATGGGGCTAAGGTTCTTAAAGGTAGTATCACCATATATTCAAGTCCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR CCA 90 bp ACACACACACACACACACACACACACACACACACACACGAGTGTATTAATTCCTAGTGGGAAAGTAGGTTaGAGTCAAGTTATGAAAGAT +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTHTHTSVLIPSGKVG*SQVMKD
Trigger: ATCTTTCATAACTTGACTCCAACCTACTTTCCCACT...AGGAATTAATACACTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR CCA 90 bp AAAGGACTTGAATATATGGTGATACTACCTTTAAGAACCTTAGCCCCATCTCAAAAAGCTCCAGGTGTTTaGGATGATTGGCAGGGAGTT +
Preference number: 4 (lower is better)
Translates to: KGLEYMVILPLRTLAPSQKAPGV*DDWQGV
Trigger: AACTCCCTGCCAATCATCCCAAACACCTGGAGCTTT...TTGAGATGGGGCTAAGGTTCTTAAAGGTAGTATCACCATATATTCAAGTCCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR TCA 90 bp AAAGGACTTGAATATATGGTGATACTACCTTTAAGAACCTTAGCCCCATCTCAAGTTTTAAAGCAGTGCTaGGTATCAAGGTCCCACCAT +
Preference number: 4 (lower is better)
Translates to: KGLEYMVILPLRTLAPSQVLKQC*VSRSHH
Trigger: ATGGTGGGACCTTGATACTCAGCACTGCTTTAAAAC...TTGAGATGGGGCTAAGGTTCTTAAAGGTAGTATCACCATATATTCAAGTCCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR TCA 90 bp AACTGCATATCACAGTGCTCCCAAAAAGCAGAGAAAAGTCATGACATTACAAGACAATATTGTCTGAGCTaGATGACAAAGTCCGCACAT +
Preference number: 4 (lower is better)
Translates to: NCISQCSQKAEKSHDITRQYCLS*MTKSAH
Trigger: ATGTGCGGACTTTGTCATTCAGCTCAGACAATATTG...TCTTGTAATGTCATGACTTTTCTCTGCTTTTTGGGAGCACTGTGATATGCAGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR TCA 90 bp AACTGCATATCACAGTGCTCCCAAAAAGCAGAGAAAAGTCATGACATTACAAGAACATCAGAGCCCAGCTaGATGAATTCGTTAAAGAGT +
Preference number: 4 (lower is better)
Translates to: NCISQCSQKAEKSHDITRTSEPS*MNSLKS
Trigger: ACTCTTTAACGAATTCATTCAGCTGGGCTCTGATGT...TCTTGTAATGTCATGACTTTTCTCTGCTTTTTGGGAGCACTGTGATATGCAGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR TCA 90 bp TTGGCTAGGTTCTGTACATGTCACTTTATCATAAAAGTTCTCCTTCTCTTCGATGTGATCTGTCCAAAGTaGATCCTAAGGAGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: LARFCTCHFIIKVLLLFDVICPK*ILRRKK
Trigger: CTTCTTCCTCCTTAGGATTCACTTTGGACAGATCAC...ATCGAAGAGAAGGAGAACTTTTATGATAAAGTGACATGTACAGAACCTAGCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR TCA 90 bp ATTTATTCCCTGCTAGAATATAAAGGGAACAACAAGCTTGAGCTGCAAGGCTCATTGGTATTTTTAAGATaGCGCCAACTCTTCTGTGCT +
Preference number: 4 (lower is better)
Translates to: IYSLLEYKGNNKLELQGSLVFLR*RQLFCA
Trigger: AGCACAGAAGAGTTGGCGTCATCTTAAAAATACCAA...TGAGCCTTGCAGCTCAAGCTTGTTGTTCCCTTTATATTCTAGCAGGGAATAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR TCA 90 bp AACTGCATATCACAGTGCTCCCAAAAAGCAGAGAAAAGTCATGACATTACAAGAGCAAGGCTCAAGCTTTaGGAGCACAGAAAGATTTTT +
Preference number: 4 (lower is better)
Translates to: NCISQCSQKAEKSHDITRARLKL*EHRKIF
Trigger: AAAAATCTTTCTGTGCTCTCAAAGCTTGAGCCTTGC...TCTTGTAATGTCATGACTTTTCTCTGCTTTTTGGGAGCACTGTGATATGCAGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR TCA 90 bp CATATCTTTATTAAGATGAATCCAGGGTTATTGTGCAGGACATGTCAAAGGGGAAAAGACGGACACAATTaGCGGATGCTATTGAGATGT +
Preference number: 4 (lower is better)
Translates to: HIFIKMNPGLLCRTCQRGKDGHN*RMLLRC
Trigger: ACATCTCAATAGCATCCGTCAATTGTGTCCGTCTTT...TCCCCTTTGACATGTCCTGCACAATAACCCTGGATTCATCTTAATAAAGATATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR TCA 90 bp AAAGGACTTGAATATATGGTGATACTACCTTTAAGAACCTTAGCCCCATCTCAACATAAAAGAGGGACATaGATGAAAGACATGGTGGGG +
Preference number: 4 (lower is better)
Translates to: KGLEYMVILPLRTLAPSQHKRGT*MKDMVG
Trigger: CCCCACCATGTCTTTCATTCATGTCCCTCTTTTATG...TTGAGATGGGGCTAAGGTTCTTAAAGGTAGTATCACCATATATTCAAGTCCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR GCA 90 bp CATATCTTTATTAAGATGAATCCAGGGTTATTGTGCAGGACATGTCAAAGGGGATGGAACCAGCTTTTCTaGATGAAAGGATTCGATCCT +
Preference number: 4 (lower is better)
Translates to: HIFIKMNPGLLCRTCQRGWNQLF*MKGFDP
Trigger: AGGATCGAATCCTTTCATGCAGAAAAGCTGGTTCCA...TCCCCTTTGACATGTCCTGCACAATAACCCTGGATTCATCTTAATAAAGATATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR GCA 90 bp TTGGCTAGGTTCTGTACATGTCACTTTATCATAAAAGTTCTCCTTCTCTTCGATACAACAAGCTTGAGCTaGAAGGCTCAAGCTTTGAGA +
Preference number: 4 (lower is better)
Translates to: LARFCTCHFIIKVLLLFDTTSLS*KAQALR
Trigger: TCTCAAAGCTTGAGCCTTGCAGCTCAAGCTTGTTGT...ATCGAAGAGAAGGAGAACTTTTATGATAAAGTGACATGTACAGAACCTAGCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR GCA 90 bp AACTGCATATCACAGTGCTCCCAAAAAGCAGAGAAAAGTCATGACATTACAAGAAGATGCCGAAACGCCTaGCTTTATGTAGCTTACATT +
Preference number: 4 (lower is better)
Translates to: NCISQCSQKAEKSHDITRRCRNA*LYVAYI
Trigger: AATGTAAGCTACATAAAGGCAGGCGTTTCGGCATCT...TCTTGTAATGTCATGACTTTTCTCTGCTTTTTGGGAGCACTGTGATATGCAGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR CCA 90 bp AAAGGACTTGAATATATGGTGATACTACCTTTAAGAACCTTAGCCCCATCTCAAGATTTTCTTGGGGTCTaGTTCTTCCGGGTCTTCAAT +
Preference number: 4 (lower is better)
Translates to: KGLEYMVILPLRTLAPSQDFLGV*FFRVFN
Trigger: ATTGAAGACCCGGAAGAACCAGACCCCAAGAAAATC...TTGAGATGGGGCTAAGGTTCTTAAAGGTAGTATCACCATATATTCAAGTCCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR CCA 90 bp CATATCTTTATTAAGATGAATCCAGGGTTATTGTGCAGGACATGTCAAAGGGGAAGAAGAGGTGAGACTTaGGTACAAACTGTAGGTACA +
Preference number: 4 (lower is better)
Translates to: HIFIKMNPGLLCRTCQRGRRGET*VQTVGT
Trigger: TGTACCTACAGTTTGTACCCAAGTCTCACCTCTTCT...TCCCCTTTGACATGTCCTGCACAATAACCCTGGATTCATCTTAATAAAGATATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR CCA 90 bp AAAGGACTTGAATATATGGTGATACTACCTTTAAGAACCTTAGCCCCATCTCAACCTAGAAGAAAATGGTaGCCCCACAACACAGTAACT +
Preference number: 4 (lower is better)
Translates to: KGLEYMVILPLRTLAPSQPRRKW*PHNTVT
Trigger: AGTTACTGTGTTGTGGGGCCACCATTTTCTTCTAGG...TTGAGATGGGGCTAAGGTTCTTAAAGGTAGTATCACCATATATTCAAGTCCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR CCA 90 bp AAAGGACTTGAATATATGGTGATACTACCTTTAAGAACCTTAGCCCCATCTCAATTAAGACTTGTGGTTTaGGACACAAATCGGCAAGCC +
Preference number: 4 (lower is better)
Translates to: KGLEYMVILPLRTLAPSQLRLVV*DTNRQA
Trigger: GGCTTGCCGATTTGTGTCCCAAACCACAAGTCTTAA...TTGAGATGGGGCTAAGGTTCTTAAAGGTAGTATCACCATATATTCAAGTCCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR CCA 90 bp AACTGCATATCACAGTGCTCCCAAAAAGCAGAGAAAAGTCATGACATTACAAGAACAACACTGACTCCTTaGAAAGCACCTAGAATGCAT +
Preference number: 4 (lower is better)
Translates to: NCISQCSQKAEKSHDITRTTLTP*KAPRMH
Trigger: ATGCATTCTAGGTGCTTTCCAAGGAGTCAGTGTTGT...TCTTGTAATGTCATGACTTTTCTCTGCTTTTTGGGAGCACTGTGATATGCAGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000349139.6
3UTR CAA 72 bp TGGTCCAGAGAACTTCTACAATTTATTCCTCCACACTaGGAGTCTTCATGTCTCGTAAAGTTTCTCCACATT +
Preference number: 4 (lower is better)
Translates to: WSRELLQFIPPH*ESSCLVKFLHI
Trigger: AATGTGGAGAAACTTTACGAGACATGAAGACTCCAAGTGTGGAGGAATAAATTGTAGAAGTTCTCTGGACCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR TCA 90 bp AACTGCATATCACAGTGCTCCCAAAAAGCAGAGAAAAGTCATGACATTACAAGACAAAATCCCAGAATTTaGCAGATTTATCTGCACCAC +
Preference number: 4 (lower is better)
Translates to: NCISQCSQKAEKSHDITRQNPRI*QIYLHH
Trigger: GTGGTGCAGATAAATCTGTCAAATTCTGGGATTTTG...TCTTGTAATGTCATGACTTTTCTCTGCTTTTTGGGAGCACTGTGATATGCAGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR TCA 90 bp AAAGGACTTGAATATATGGTGATACTACCTTTAAGAACCTTAGCCCCATCTCAAGATTGGGAGAGTAACTaGCACACAGAACATCTTCAT +
Preference number: 4 (lower is better)
Translates to: KGLEYMVILPLRTLAPSQDWESN*HTEHLH
Trigger: ATGAAGATGTTCTGTGTGTCAGTTACTCTCCCAATC...TTGAGATGGGGCTAAGGTTCTTAAAGGTAGTATCACCATATATTCAAGTCCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR TCA 90 bp CATATCTTTATTAAGATGAATCCAGGGTTATTGTGCAGGACATGTCAAAGGGGATCAAGCATTCAAATTTaGGGTATTAGACCCCAGGTT +
Preference number: 4 (lower is better)
Translates to: HIFIKMNPGLLCRTCQRGSSIQI*GIRPQV
Trigger: AACCTGGGGTCTAATACCTCAAATTTGAATGCTTGA...TCCCCTTTGACATGTCCTGCACAATAACCCTGGATTCATCTTAATAAAGATATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR TCA 90 bp ATTTATTCCCTGCTAGAATATAAAGGGAACAACAAGCTTGAGCTGCAAGGCTCAATCTTCATTCATCTTTaGAAGCACCTAGCCAAATCT +
Preference number: 4 (lower is better)
Translates to: IYSLLEYKGNNKLELQGSIFIHL*KHLAKS
Trigger: AGATTTGGCTAGGTGCTTTCAAAGATGAATGAAGAT...TGAGCCTTGCAGCTCAAGCTTGTTGTTCCCTTTATATTCTAGCAGGGAATAAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR TCA 90 bp TTCCCACTAGTAACTAGCAGGTTCTTTTCTCGTAGAAACAATGCTTGTGTGATGTCTTGTTTAAGCCCCTaGAGGATAAGAATCTGTAAA +
Preference number: 4 (lower is better)
Translates to: FPLVTSRFFSRRNNACVMSCLSP*RIRICK
Trigger: TTTACAGATTCTTATCCTTCAGGGGCTTAAACAAGA...CATCACACAAGCATTGTTTCTACGAGAAAAGAACCTGCTAGTTACTAGTGGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369441.7
CDS-3UTR GCA 90 bp TTGGCTAGGTTCTGTACATGTCACTTTATCATAAAAGTTCTCCTTCTCTTCGATCAAGGTAGTGATAGCTaGTTTGTGACCATTGAAGGT +
Preference number: 4 (lower is better)
Translates to: LARFCTCHFIIKVLLLFDQGSDS*FVTIEG
Trigger: ACCTTCAATGGTCACAAAGCAGCTATCACTACCTTG...ATCGAAGAGAAGGAGAACTTTTATGATAAAGTGACATGTACAGAACCTAGCCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR GCA 90 bp TTGGCTAGGTTCTGTACATGTCACTTTATCATAAAAGTTCTCCTTCTCTTCGATTGGAACCTCTTTCCCTaGAGCTTTACAAATGGCTTT +
Preference number: 4 (lower is better)
Translates to: LARFCTCHFIIKVLLLFDWNLFP*SFTNGF
Trigger: AAAGCCATTTGTAAAGCTGCAGGGAAAGAGGTTCCA...ATCGAAGAGAAGGAGAACTTTTATGATAAAGTGACATGTACAGAACCTAGCCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR GCA 90 bp CATATCTTTATTAAGATGAATCCAGGGTTATTGTGCAGGACATGTCAAAGGGGAAACTGCATATCACAGTaGTCCCAAAAAGCAGAGAAA +
Preference number: 4 (lower is better)
Translates to: HIFIKMNPGLLCRTCQRGNCISQ*SQKAEK
Trigger: TTTCTCTGCTTTTTGGGAGCACTGTGATATGCAGTT...TCCCCTTTGACATGTCCTGCACAATAACCCTGGATTCATCTTAATAAAGATATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR GCA 90 bp TTGGCTAGGTTCTGTACATGTCACTTTATCATAAAAGTTCTCCTTCTCTTCGATTCTTCATTAAGCTTCTaGTCACAACCTCCCTCTCTT +
Preference number: 4 (lower is better)
Translates to: LARFCTCHFIIKVLLLFDSSLSF*SQPPSL
Trigger: AAGAGAGGGAGGTTGTGAGCAGAAGCTTAATGAAGA...ATCGAAGAGAAGGAGAACTTTTATGATAAAGTGACATGTACAGAACCTAGCCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR CCA 90 bp AACTGCATATCACAGTGCTCCCAAAAAGCAGAGAAAAGTCATGACATTACAAGAACAATATTACCTTTTTaGCTGCCGATAACGCCAAAG +
Preference number: 4 (lower is better)
Translates to: NCISQCSQKAEKSHDITRTILPF*LPITPK
Trigger: CTTTGGCGTTATCGGCAGCCAAAAAGGTAATATTGT...TCTTGTAATGTCATGACTTTTCTCTGCTTTTTGGGAGCACTGTGATATGCAGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR CCA 90 bp AAAGGACTTGAATATATGGTGATACTACCTTTAAGAACCTTAGCCCCATCTCAAATATTAGTCACCCGCTaGATTTCATCTTGCAGACTC +
Preference number: 4 (lower is better)
Translates to: KGLEYMVILPLRTLAPSQILVTR*ISSCRL
Trigger: GAGTCTGCAAGATGAAATCCAGCGGGTGACTAATAT...TTGAGATGGGGCTAAGGTTCTTAAAGGTAGTATCACCATATATTCAAGTCCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR CCA 90 bp AACTGCATATCACAGTGCTCCCAAAAAGCAGAGAAAAGTCATGACATTACAAGAGAGTTTAAGAATGTCTaGGACATAAGAGAAAGGCAG +
Preference number: 4 (lower is better)
Translates to: NCISQCSQKAEKSHDITREFKNV*DIRERQ
Trigger: CTGCCTTTCTCTTATGTCCCAGACATTCTTAAACTC...TCTTGTAATGTCATGACTTTTCTCTGCTTTTTGGGAGCACTGTGATATGCAGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR CCA 90 bp AACTGCATATCACAGTGCTCCCAAAAAGCAGAGAAAAGTCATGACATTACAAGATTCTTCTCTTCCAAGTaGCTAGTAGCATCAGCAAAA +
Preference number: 4 (lower is better)
Translates to: NCISQCSQKAEKSHDITRFFSSK*LVASAK
Trigger: TTTTGCTGATGCTACTAGCCACTTGGAAGAGAAGAA...TCTTGTAATGTCATGACTTTTCTCTGCTTTTTGGGAGCACTGTGATATGCAGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR CCA 90 bp AACTGCATATCACAGTGCTCCCAAAAAGCAGAGAAAAGTCATGACATTACAAGATTTAAGTCCAAGAAATaGAGCCAGCCCATAATCTCA +
Preference number: 4 (lower is better)
Translates to: NCISQCSQKAEKSHDITRFKSKK*SQPIIS
Trigger: TGAGATTATGGGCTGGCTCCATTTCTTGGACTTAAA...TCTTGTAATGTCATGACTTTTCTCTGCTTTTTGGGAGCACTGTGATATGCAGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR CCA 90 bp AACTGCATATCACAGTGCTCCCAAAAAGCAGAGAAAAGTCATGACATTACAAGAAGACATTCTAGACATTaGCATATCCATCCTCTAACC +
Preference number: 4 (lower is better)
Translates to: NCISQCSQKAEKSHDITRRHSRH*HIHPLT
Trigger: GGTTAGAGGATGGATATGCCAATGTCTAGAATGTCT...TCTTGTAATGTCATGACTTTTCTCTGCTTTTTGGGAGCACTGTGATATGCAGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000349139.6
3UTR CAA 72 bp AATGTGTACTGTGTTCTAAAAACATACCAGGGCTGCTaGGATCCCAAAAACCTCAGAAATAAAGAGAAAGGA +
Preference number: 4 (lower is better)
Translates to: NVYCVLKTYQGC*DPKNLRNKEKG
Trigger: TCCTTTCTCTTTATTTCTGAGGTTTTTGGGATCCAAGCAGCCCTGGTATGTTTTTAGAACACAGTACACATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR TCA 90 bp TTGGCTAGGTTCTGTACATGTCACTTTATCATAAAAGTTCTCCTTCTCTTCGATTCTTGTTTAAGCCCCTaGAGGATAAGAATCTTCTCT +
Preference number: 4 (lower is better)
Translates to: LARFCTCHFIIKVLLLFDSCLSP*RIRIFS
Trigger: AGAGAAGATTCTTATCCTTCAGGGGCTTAAACAAGA...ATCGAAGAGAAGGAGAACTTTTATGATAAAGTGACATGTACAGAACCTAGCCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR TCA 90 bp AAAGGACTTGAATATATGGTGATACTACCTTTAAGAACCTTAGCCCCATCTCAAACCAGGTACAAAGAATaGGCAAAGTGCATATTCACA +
Preference number: 4 (lower is better)
Translates to: KGLEYMVILPLRTLAPSQTRYKE*AKCIFT
Trigger: TGTGAATATGCACTTTGCTCATTCTTTGTACCTGGT...TTGAGATGGGGCTAAGGTTCTTAAAGGTAGTATCACCATATATTCAAGTCCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR TCA 90 bp CATATCTTTATTAAGATGAATCCAGGGTTATTGTGCAGGACATGTCAAAGGGGATACACAGTATGTTACTaGAATAATTTCACAGCCACC +
Preference number: 4 (lower is better)
Translates to: HIFIKMNPGLLCRTCQRGYTVCY*NNFTAT
Trigger: GGTGGCTGTGAAATTATTTCAGTAACATACTGTGTA...TCCCCTTTGACATGTCCTGCACAATAACCCTGGATTCATCTTAATAAAGATATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR TCA 90 bp CATATCTTTATTAAGATGAATCCAGGGTTATTGTGCAGGACATGTCAAAGGGGACCCAAATCCTTACCATaGAGATATACAGTAGACAAT +
Preference number: 4 (lower is better)
Translates to: HIFIKMNPGLLCRTCQRGPKSLP*RYTVDN
Trigger: ATTGTCTACTGTATATCTTCATGGTAAGGATTTGGG...TCCCCTTTGACATGTCCTGCACAATAACCCTGGATTCATCTTAATAAAGATATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR TCA 90 bp AACTGCATATCACAGTGCTCCCAAAAAGCAGAGAAAAGTCATGACATTACAAGAAAAAAGCATGAAATCTaGTGTAGATATGGTTTGGGG +
Preference number: 4 (lower is better)
Translates to: NCISQCSQKAEKSHDITRKKHEI*CRYGLG
Trigger: CCCCAAACCATATCTACATCAGATTTCATGCTTTTT...TCTTGTAATGTCATGACTTTTCTCTGCTTTTTGGGAGCACTGTGATATGCAGTT
38% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR TCA 90 bp TTGGCTAGGTTCTGTACATGTCACTTTATCATAAAAGTTCTCCTTCTCTTCGATTCAGATATTCCGAGGTaGAGGAGAAAGTTAAAGGAA +
Preference number: 4 (lower is better)
Translates to: LARFCTCHFIIKVLLLFDSDIPR*RRKLKE
Trigger: TTCCTTTAACTTTCTCCTTCACCTCGGAATATCTGA...ATCGAAGAGAAGGAGAACTTTTATGATAAAGTGACATGTACAGAACCTAGCCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR GCA 90 bp TTGGCTAGGTTCTGTACATGTCACTTTATCATAAAAGTTCTCCTTCTCTTCGATTGCAAAGTTCGGGTTTaGTTCACAGAAAGTCTCTTT +
Preference number: 4 (lower is better)
Translates to: LARFCTCHFIIKVLLLFDCKVRV*FTESLF
Trigger: AAAGAGACTTTCTGTGAAGCAAACCCGAACTTTGCA...ATCGAAGAGAAGGAGAACTTTTATGATAAAGTGACATGTACAGAACCTAGCCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR GCA 90 bp ATTTATTCCCTGCTAGAATATAAAGGGAACAACAAGCTTGAGCTGCAAGGCTCAGAATCAAAAGTTATATaGAGATTTTTGACTGTGCGG +
Preference number: 4 (lower is better)
Translates to: IYSLLEYKGNNKLELQGSESKVI*RFLTVR
Trigger: CCGCACAGTCAAAAATCTGCATATAACTTTTGATTC...TGAGCCTTGCAGCTCAAGCTTGTTGTTCCCTTTATATTCTAGCAGGGAATAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR GCA 90 bp TTGGCTAGGTTCTGTACATGTCACTTTATCATAAAAGTTCTCCTTCTCTTCGATTGTATACATCTCGAATaGCCTCCTGGAACTTGTTTT +
Preference number: 4 (lower is better)
Translates to: LARFCTCHFIIKVLLLFDCIHLE*PPGTCF
Trigger: AAAACAAGTTCCAGGAGGGCATTCGAGATGTATACA...ATCGAAGAGAAGGAGAACTTTTATGATAAAGTGACATGTACAGAACCTAGCCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR GCA 90 bp TTGGCTAGGTTCTGTACATGTCACTTTATCATAAAAGTTCTCCTTCTCTTCGATACAATCTCAGCTCACTaGAATCTCAAAAGGCTTTTC +
Preference number: 4 (lower is better)
Translates to: LARFCTCHFIIKVLLLFDTISAH*NLKRLF
Trigger: GAAAAGCCTTTTGAGATTGCAGTGAGCTGAGATTGT...ATCGAAGAGAAGGAGAACTTTTATGATAAAGTGACATGTACAGAACCTAGCCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR GCA 90 bp AAAGGACTTGAATATATGGTGATACTACCTTTAAGAACCTTAGCCCCATCTCAATTATGCTTTCAAAGATaGCGAAACGCCTGCCTTTAT +
Preference number: 4 (lower is better)
Translates to: KGLEYMVILPLRTLAPSQLCFQR*RNACLY
Trigger: ATAAAGGCAGGCGTTTCGGCATCTTTGAAAGCATAA...TTGAGATGGGGCTAAGGTTCTTAAAGGTAGTATCACCATATATTCAAGTCCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR CCA 90 bp AACTGCATATCACAGTGCTCCCAAAAAGCAGAGAAAAGTCATGACATTACAAGACTGCAGCTTTACAAATaGCTTTGTGTTCCTTCATTT +
Preference number: 4 (lower is better)
Translates to: NCISQCSQKAEKSHDITRLQLYK*LCVPSF
Trigger: AAATGAAGGAACACAAAGCCATTTGTAAAGCTGCAG...TCTTGTAATGTCATGACTTTTCTCTGCTTTTTGGGAGCACTGTGATATGCAGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR CCA 90 bp CATATCTTTATTAAGATGAATCCAGGGTTATTGTGCAGGACATGTCAAAGGGGAATAACATCCCGGACTTaGCTGACTTTTGAAATAGTT +
Preference number: 4 (lower is better)
Translates to: HIFIKMNPGLLCRTCQRGITSRT*LTFEIV
Trigger: AACTATTTCAAAAGTCAGCCAAGTCCGGGATGTTAT...TCCCCTTTGACATGTCCTGCACAATAACCCTGGATTCATCTTAATAAAGATATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR CCA 90 bp ATTTATTCCCTGCTAGAATATAAAGGGAACAACAAGCTTGAGCTGCAAGGCTCAAATACAGATCATACATaGTGCAATTCACAGTTTTGG +
Preference number: 4 (lower is better)
Translates to: IYSLLEYKGNNKLELQGSNTDHT*CNSQFW
Trigger: CCAAAACTGTGAATTGCACCATGTATGATCTGTATT...TGAGCCTTGCAGCTCAAGCTTGTTGTTCCCTTTATATTCTAGCAGGGAATAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR CCA 90 bp CATATCTTTATTAAGATGAATCCAGGGTTATTGTGCAGGACATGTCAAAGGGGATTGAGTTATAAATGGTaGCAAAGCTACGGGAAAACA +
Preference number: 4 (lower is better)
Translates to: HIFIKMNPGLLCRTCQRGLSYKW*QSYGKT
Trigger: TGTTTTCCCGTAGCTTTGCCACCATTTATAACTCAA...TCCCCTTTGACATGTCCTGCACAATAACCCTGGATTCATCTTAATAAAGATATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR CCA 90 bp AACTGCATATCACAGTGCTCCCAAAAAGCAGAGAAAAGTCATGACATTACAAGACCAAAAATTGTAACTTaGCTAGGTTCTGTACATGTC +
Preference number: 4 (lower is better)
Translates to: NCISQCSQKAEKSHDITRPKIVT*LGSVHV
Trigger: GACATGTACAGAACCTAGCCAAGTTACAATTTTTGG...TCTTGTAATGTCATGACTTTTCTCTGCTTTTTGGGAGCACTGTGATATGCAGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR CCA 90 bp ATTTATTCCCTGCTAGAATATAAAGGGAACAACAAGCTTGAGCTGCAAGGCTCAATTATATACAGCCAATaGCTGACTAAGGCAATGAAT +
Preference number: 4 (lower is better)
Translates to: IYSLLEYKGNNKLELQGSIIYSQ*LTKAMN
Trigger: ATTCATTGCCTTAGTCAGCCATTGGCTGTATATAAT...TGAGCCTTGCAGCTCAAGCTTGTTGTTCCCTTTATATTCTAGCAGGGAATAAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349139.6
3UTR CAA 72 bp GATGTATACATCTCGAATGCCCTCCTGGAACTTGTTTaGGTTTGGAAACCATCAAAAATGTTACTAGAAAGT +
Preference number: 4 (lower is better)
Translates to: DVYISNALLELV*VWKPSKMLLES
Trigger: ACTTTCTAGTAACATTTTTGATGGTTTCCAAACCAAAACAAGTTCCAGGAGGGCATTCGAGATGTATACATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR TCA 90 bp TTGGCTAGGTTCTGTACATGTCACTTTATCATAAAAGTTCTCCTTCTCTTCGATATAAGCCACCTGGCCTaGATGAATGAAAATATTTGT +
Preference number: 4 (lower is better)
Translates to: LARFCTCHFIIKVLLLFDISHLA*MNENIC
Trigger: ACAAATATTTTCATTCATTCAGGCCAGGTGGCTTAT...ATCGAAGAGAAGGAGAACTTTTATGATAAAGTGACATGTACAGAACCTAGCCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR GCA 90 bp TTGGCTAGGTTCTGTACATGTCACTTTATCATAAAAGTTCTCCTTCTCTTCGATTCACTGAATTATGCATaGATTCCTCCTTATCAGTGT +
Preference number: 4 (lower is better)
Translates to: LARFCTCHFIIKVLLLFDSLNYA*IPPYQC
Trigger: ACACTGATAAGGAGGAATGCATGCATAATTCAGTGA...ATCGAAGAGAAGGAGAACTTTTATGATAAAGTGACATGTACAGAACCTAGCCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR CCA 90 bp TTGGCTAGGTTCTGTACATGTCACTTTATCATAAAAGTTCTCCTTCTCTTCGATTCCTGGAACTTGTTTTaGTTTGGAAACCATCAAAAA +
Preference number: 4 (lower is better)
Translates to: LARFCTCHFIIKVLLLFDSWNLF*FGNHQK
Trigger: TTTTTGATGGTTTCCAAACCAAAACAAGTTCCAGGA...ATCGAAGAGAAGGAGAACTTTTATGATAAAGTGACATGTACAGAACCTAGCCAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS GCA 90 bp CCCGTCTCGGCTGCTGCTGACATCACGAACGCCTCAGCCAGAATCTaGAAAATCGGAGCCGCAGATAATGCTCTCCGCCCCAACCACGCA +
Preference number: 5 (lower is better)
Translates to: PVSAAADITNASARI*KIGAADNALRPNHA
Trigger: TGCGTGGTTGGGGCGGAGAGCATTATCTGCGGCTCCGATTTTGCAGATTCTGGCTGAGGCGTTCGTGATGTCAGCAGCAGCCGAGACGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471680.1
CDS-3UTR CAA 90 bp AAAGCAGTGCTGAGTATCAAGGTCCCACCATTTCACCATGGTATCTTTCCCACTGAGGCTCCCAGCCGATaGGACCCGCCCACAAGACCT +
Preference number: 5 (lower is better)
Translates to: KAVLSIKVPPFHHGIFPTEAPSR*DPPTRP
Trigger: AGGTCTTGTGGGCGGGTCCAATCGGCTGGGAGCCTC...AGTGGGAAAGATACCATGGTGAAATGGTGGGACCTTGATACTCAGCACTGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369441.7
CDS-3UTR CAA 90 bp GCTCCAGGTGTTTGGGATGATTGGCAGGGAGTTCAACTTGCCAAAAGCTTGAGTTGTGTGATGGCATCCTaGTGCCCCTTTAGACGGTAC +
Preference number: 5 (lower is better)
Translates to: APGVWDDWQGVQLAKSLSCVMAS*CPFRRY
Trigger: GTACCGTCTAAAGGGGCACAAGGATGCCATCACACA...ACTCAAGCTTTTGGCAAGTTGAACTCCCTGCCAATCATCCCAAACACCTGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR CAA 90 bp CTTGTCGACTGCAAGGTTTACAACTCTGTCTCTTCCTTCCCGCATTATGGAACCTGTGTGATGGCATCCTaGTGCCCCTTTAGACGGTAC +
Preference number: 5 (lower is better)
Translates to: LVDCKVYNSVSSFPHYGTCVMAS*CPFRRY
Trigger: GTACCGTCTAAAGGGGCACAAGGATGCCATCACACA...GGTTCCATAATGCGGGAAGGAAGAGACAGAGTTGTAAACCTTGCAGTCGACAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369441.7
CDS-3UTR CAA 90 bp TCCCGCATTATGGAACCAGCTTTTCTGCATGAAAGGATTCGATCCTCAGGGGCTCGGGTCTTCAATCTCTaGCAGATAAGCTATGTCCCA +
Preference number: 5 (lower is better)
Translates to: SRIMEPAFLHERIRSSGARVFNL*QISYVP
Trigger: TGGGACATAGCTTATCTGCAAGAGATTGAAGACCCG...AGCCCCTGAGGATCGAATCCTTTCATGCAGAAAAGCTGGTTCCATAATGCGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369441.7
CDS-3UTR CAA 90 bp GCTCCAGGTGTTTGGGATGATTGGCAGGGAGTTCAACTTGCCAAAAGCTTGAGTTACAATTCCACCAGGTaGTTCTGCAGCAGGAAGACA +
Preference number: 5 (lower is better)
Translates to: APGVWDDWQGVQLAKSLSYNSTR*FCSRKT
Trigger: TGTCTTCCTGCTGCAGAACAACCTGGTGGAATTGTA...ACTCAAGCTTTTGGCAAGTTGAACTCCCTGCCAATCATCCCAAACACCTGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR CAA 90 bp ACACACACACACACACACACACACACACACACACACACGAGTGTATTAATTCCTCACAGCCACCTCCTGTaGCTATGCAGTGAGCTCAAG +
Preference number: 5 (lower is better)
Translates to: THTHTHTHTHTHTSVLIPHSHLL*LCSELK
Trigger: CTTGAGCTCACTGCATAGCAACAGGAGGTGGCTGTG...AGGAATTAATACACTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS CCA 90 bp GTCTCAGAGATTTGTCATGGGACGATGATACAACATAGTCTCCACTaGGGCTTACAGCCAAACACCATATTTCCTGGTGATGACCCTCCA +
Preference number: 5 (lower is better)
Translates to: VSEICHGTMIQHSLH*GLQPNTIFPGDDPP
Trigger: TGGAGGGTCATCACCAGGAAATATGGTGTTTGGCTGTAAGCCCCAGTGGAGACTATGTTGTATCATCGTCCCATGACAAATCTCTGAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR CAA 90 bp GTTCCATGGCAAGCAAGAATCCTGCCTGTCTTGTCGACTGCAAGGTTTACAACTATAATATCTGTGTCCTaGGACCCAGATGCCAGTCTG +
Preference number: 5 (lower is better)
Translates to: VPWQARILPVLSTARFTTIISVS*DPDASL
Trigger: CAGACTGGCATCTGGGTCCAAGGACACAGATATTAT...AGTTGTAAACCTTGCAGTCGACAAGACAGGCAGGATTCTTGCTTGCCATGGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369441.7
CDS-3UTR CAA 90 bp TTGTCGACTGCAAGGTTTACAACTCTGTCTCTTCCTTCCCGCATTATGGAACCAGATCCTTTGATTTTCTaGGGGTCTGGTTCTTCCGGG +
Preference number: 5 (lower is better)
Translates to: LSTARFTTLSLPSRIMEPDPLIF*GSGSSG
Trigger: CCCGGAAGAACCAGACCCCAAGAAAATCAAAGGATC...TGGTTCCATAATGCGGGAAGGAAGAGACAGAGTTGTAAACCTTGCAGTCGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369441.7
CDS TCA 90 bp CCACAAAGCTCCATCATGTGCATCTATTGTCTCCAGCAGATTCCCTaGAGCCAAGTCATAAAGCTGCAGCTTCCCTGTCTTTGTTCCTAT +
Preference number: 5 (lower is better)
Translates to: PQSSIMCIYCLQQIP*SQVIKLQLPCLCSY
Trigger: ATAGGAACAAAGACAGGGAAGCTGCAGCTTTATGACTTGGCTTCAGGGAATCTGCTGGAGACAATAGATGCACATGATGGAGCTTTGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS TCA 90 bp CTCCCTTGTTCTCTCCCAAAGTCTCAGAGATTTGTCATGGGACGATaGTACAACATAGTCTCCACTGGGGCTTACAGCCAAACACCATAT +
Preference number: 5 (lower is better)
Translates to: LPCSLPKSQRFVMGR*YNIVSTGAYSQTPY
Trigger: ATATGGTGTTTGGCTGTAAGCCCCAGTGGAGACTATGTTGTATCATCGTCCCATGACAAATCTCTGAGACTTTGGGAGAGAACAAGGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR CAA 90 bp ACAACTCTGTCTCTTCCTTCCCGCATTATGGAACCAGCTTTTCTGCATGAAAGGCCAGGAGAAGATCCTTaGATTTTCTTGGGGTCTGGT +
Preference number: 5 (lower is better)
Translates to: TTLSLPSRIMEPAFLHERPGEDP*IFLGSG
Trigger: ACCAGACCCCAAGAAAATCAAAGGATCTTCTCCTGG...CCTTTCATGCAGAAAAGCTGGTTCCATAATGCGGGAAGGAAGAGACAGAGTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369441.7
CDS-3UTR CAA 90 bp GTCTTGTCGACTGCAAGGTTTACAACTCTGTCTCTTCCTTCCCGCATTATGGAAAGAATCCTGCCTGTCTaGTCGACTGCAAGGTTTACA +
Preference number: 5 (lower is better)
Translates to: VLSTARFTTLSLPSRIMERILPV*STARFT
Trigger: TGTAAACCTTGCAGTCGACAAGACAGGCAGGATTCT...TTCCATAATGCGGGAAGGAAGAGACAGAGTTGTAAACCTTGCAGTCGACAAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369441.7
CDS-3UTR CAA 90 bp ACACACACACACACACACACACACACACACACACACACGAGTGTATTAATTCCTTCAAGACCAGCCATATaGAAGCCGATAACATCCCGG +
Preference number: 5 (lower is better)
Translates to: THTHTHTHTHTHTSVLIPSRPAI*KPITSR
Trigger: CCGGGATGTTATCGGCTTCAATATGGCTGGTCTTGA...AGGAATTAATACACTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR CAA 90 bp ACACACACACACACACACACACACACACACACACACACGAGTGTATTAATTCCTGTTATATGCAGATTTTaGACTGTGCGGGGCGTAGGG +
Preference number: 5 (lower is better)
Translates to: THTHTHTHTHTHTSVLIPVICRF*TVRGVG
Trigger: CCCTACGCCCCGCACAGTCAAAAATCTGCATATAAC...AGGAATTAATACACTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR CAA 90 bp GCTCCAGGTGTTTGGGATGATTGGCAGGGAGTTCAACTTGCCAAAAGCTTGAGTCCACAACACAGTAACTaGGTTGCAATGACCAAATTC +
Preference number: 5 (lower is better)
Translates to: APGVWDDWQGVQLAKSLSPQHSN*VAMTKF
Trigger: GAATTTGGTCATTGCAACCAAGTTACTGTGTTGTGG...ACTCAAGCTTTTGGCAAGTTGAACTCCCTGCCAATCATCCCAAACACCTGGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR CAA 90 bp ACACACACACACACACACACACACACACACACACACACGAGTGTATTAATTCCTCGGGTCTTCAATCTCTaGCAGATAAGCTATGTCCCA +
Preference number: 5 (lower is better)
Translates to: THTHTHTHTHTHTSVLIPRVFNL*QISYVP
Trigger: TGGGACATAGCTTATCTGCAAGAGATTGAAGACCCG...AGGAATTAATACACTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR CAA 90 bp ACACACACACACACACACACACACACACACACACACACGAGTGTATTAATTCCTCATCATGTGCATCTATaGTCTCCAGCAGATTCCCTG +
Preference number: 5 (lower is better)
Translates to: THTHTHTHTHTHTSVLIPHHVHL*SPADSL
Trigger: CAGGGAATCTGCTGGAGACAATAGATGCACATGATG...AGGAATTAATACACTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR CAA 90 bp AACTGCATATCACAGTGCTCCCAAAAAGCAGAGAAAAGTCATGACATTACAAGAGCCATTAGGATGGGGTaGCTGGGAAGTGGAACCTCT +
Preference number: 5 (lower is better)
Translates to: NCISQCSQKAEKSHDITRAIRMG*LGSGTS
Trigger: AGAGGTTCCACTTCCCAGCAACCCCATCCTAATGGC...TCTTGTAATGTCATGACTTTTCTCTGCTTTTTGGGAGCACTGTGATATGCAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR CAA 90 bp GCTCCAGGTGTTTGGGATGATTGGCAGGGAGTTCAACTTGCCAAAAGCTTGAGTAGCACTATCAGGCTTTaGAGTTATAAATGGTGGCAA +
Preference number: 5 (lower is better)
Translates to: APGVWDDWQGVQLAKSLSSTIRL*SYKWWQ
Trigger: TTGCCACCATTTATAACTCAAAAGCCTGATAGTGCT...ACTCAAGCTTTTGGCAAGTTGAACTCCCTGCCAATCATCCCAAACACCTGGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR CAA 90 bp GCTCCAGGTGTTTGGGATGATTGGCAGGGAGTTCAACTTGCCAAAAGCTTGAGTTCAAAATCCCAGAATTaGACAGATTTATCTGCACCA +
Preference number: 5 (lower is better)
Translates to: APGVWDDWQGVQLAKSLSSKSQN*TDLSAP
Trigger: TGGTGCAGATAAATCTGTCAAATTCTGGGATTTTGA...ACTCAAGCTTTTGGCAAGTTGAACTCCCTGCCAATCATCCCAAACACCTGGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR CAA 90 bp ATTTATTCCCTGCTAGAATATAAAGGGAACAACAAGCTTGAGCTGCAAGGCTCAAGGAATGGGGGTGGATaGCAGACAGTAACTGTAAGC +
Preference number: 5 (lower is better)
Translates to: IYSLLEYKGNNKLELQGSRNGGG*QTVTVS
Trigger: GCTTACAGTTACTGTCTGCAATCCACCCCCATTCCT...TGAGCCTTGCAGCTCAAGCTTGTTGTTCCCTTTATATTCTAGCAGGGAATAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS TCA 90 bp AGTCCAGCAAAGACACAGCCAATAGCTTTTGATTGGGAGAGTAACTaGCACACAGAACATCTTCATCTAGTTGCAAAGTTCGGGTTTGCT +
Preference number: 5 (lower is better)
Translates to: SPAKTQPIAFDWESN*HTEHLHLVAKFGFA
Trigger: AGCAAACCCGAACTTTGCAACTAGATGAAGATGTTCTGTGTGTCAGTTACTCTCCCAATCAAAAGCTATTGGCTGTGTCTTTGCTGGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR CAA 90 bp ACACACACACACACACACACACACACACACACACACACGAGTGTATTAATTCCTGACAATATTACCTTTTaGGCTGCCGATAACGCCAAA +
Preference number: 5 (lower is better)
Translates to: THTHTHTHTHTHTSVLIPDNITF*AADNAK
Trigger: TTTGGCGTTATCGGCAGCCAAAAAGGTAATATTGTC...AGGAATTAATACACTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR CAA 90 bp ATTTATTCCCTGCTAGAATATAAAGGGAACAACAAGCTTGAGCTGCAAGGCTCAATAATATCTGTGTCCTaGGACCCAGATGCCAGTCTG +
Preference number: 5 (lower is better)
Translates to: IYSLLEYKGNNKLELQGSIISVS*DPDASL
Trigger: CAGACTGGCATCTGGGTCCAAGGACACAGATATTAT...TGAGCCTTGCAGCTCAAGCTTGTTGTTCCCTTTATATTCTAGCAGGGAATAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR CAA 90 bp TTGGCTAGGTTCTGTACATGTCACTTTATCATAAAAGTTCTCCTTCTCTTCGATTCCTGGAACTGCTGGTaGGTCTTCTTTGGCCACACT +
Preference number: 5 (lower is better)
Translates to: LARFCTCHFIIKVLLLFDSWNCW*VFFGHT
Trigger: AGTGTGGCCAAAGAAGACCAACCAGCAGTTCCAGGA...ATCGAAGAGAAGGAGAACTTTTATGATAAAGTGACATGTACAGAACCTAGCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR CAA 90 bp TTGGCTAGGTTCTGTACATGTCACTTTATCATAAAAGTTCTCCTTCTCTTCGATACCATCCTGGCTAACTaGGTGAAACCCCGTCTCTAC +
Preference number: 5 (lower is better)
Translates to: LARFCTCHFIIKVLLLFDTILAN*VKPRLY
Trigger: GTAGAGACGGGGTTTCACCAAGTTAGCCAGGATGGT...ATCGAAGAGAAGGAGAACTTTTATGATAAAGTGACATGTACAGAACCTAGCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR CAA 90 bp AAAGGACTTGAATATATGGTGATACTACCTTTAAGAACCTTAGCCCCATCTCAAGCTGAAGGGTTAGTCTaGGCAAGGGAGAAGCTGAAG +
Preference number: 5 (lower is better)
Translates to: KGLEYMVILPLRTLAPSQAEGLV*AREKLK
Trigger: CTTCAGCTTCTCCCTTGCCAAGACTAACCCTTCAGC...TTGAGATGGGGCTAAGGTTCTTAAAGGTAGTATCACCATATATTCAAGTCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR CAA 90 bp ACACACACACACACACACACACACACACACACACACACGAGTGTATTAATTCCTAAAAGACGGACACAATaGACGGATGCTATTGAGATG +
Preference number: 5 (lower is better)
Translates to: THTHTHTHTHTHTSVLIPKRRTQ*TDAIEM
Trigger: CATCTCAATAGCATCCGTCAATTGTGTCCGTCTTTT...AGGAATTAATACACTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS TCA 90 bp TGTCTTTGTTCCTATGACTACCTGTCTATCACCAGGTACAAAGAATaGGCAAAGTGCATATTCACAGGTCATTGTGCGAATACACTGCAG +
Preference number: 5 (lower is better)
Translates to: CLCSYDYLSITRYKE*AKCIFTGHCANTLQ
Trigger: CTGCAGTGTATTCGCACAATGACCTGTGAATATGCACTTTGCTCATTCTTTGTACCTGGTGATAGACAGGTAGTCATAGGAACAAAGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS GCA 90 bp TTCCTGGTGATGACCCTCCAGAGTCTGTATGTGTTCAAATTTGTCTaGATCCCACTGTTTAATCTTATGATCTTTTCCGGCAGTGAAGAA +
Preference number: 5 (lower is better)
Translates to: FLVMTLQSLYVFKFV*IPLFNLMIFSGSEE
Trigger: TTCTTCACTGCCGGAAAAGATCATAAGATTAAACAGTGGGATGCAGACAAATTTGAACACATACAGACTCTGGAGGGTCATCACCAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR CAA 90 bp AAAGGACTTGAATATATGGTGATACTACCTTTAAGAACCTTAGCCCCATCTCAAGATCCTTTGATTTTCTaGGGGTCTGGTTCTTCCGGG +
Preference number: 5 (lower is better)
Translates to: KGLEYMVILPLRTLAPSQDPLIF*GSGSSG
Trigger: CCCGGAAGAACCAGACCCCAAGAAAATCAAAGGATC...TTGAGATGGGGCTAAGGTTCTTAAAGGTAGTATCACCATATATTCAAGTCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR CAA 90 bp CATATCTTTATTAAGATGAATCCAGGGTTATTGTGCAGGACATGTCAAAGGGGACCAGGAGAAGATCCTTaGATTTTCTTGGGGTCTGGT +
Preference number: 5 (lower is better)
Translates to: HIFIKMNPGLLCRTCQRGPGEDP*IFLGSG
Trigger: ACCAGACCCCAAGAAAATCAAAGGATCTTCTCCTGG...TCCCCTTTGACATGTCCTGCACAATAACCCTGGATTCATCTTAATAAAGATATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR CAA 90 bp TTGGCTAGGTTCTGTACATGTCACTTTATCATAAAAGTTCTCCTTCTCTTCGATGCTGGTTGGTCTTCTTaGGCCACACTCTCCTCATAT +
Preference number: 5 (lower is better)
Translates to: LARFCTCHFIIKVLLLFDAGWSS*ATLSSY
Trigger: ATATGAGGAGAGTGTGGCCAAAGAAGACCAACCAGC...ATCGAAGAGAAGGAGAACTTTTATGATAAAGTGACATGTACAGAACCTAGCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR CAA 90 bp AACTGCATATCACAGTGCTCCCAAAAAGCAGAGAAAAGTCATGACATTACAAGAAAAGTAACTGTCACCTaGAGTCTCTCCTGGAACTGC +
Preference number: 5 (lower is better)
Translates to: NCISQCSQKAEKSHDITRKVTVT*SLSWNC
Trigger: GCAGTTCCAGGAGAGACTCAAGGTGACAGTTACTTT...TCTTGTAATGTCATGACTTTTCTCTGCTTTTTGGGAGCACTGTGATATGCAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR CAA 90 bp CATATCTTTATTAAGATGAATCCAGGGTTATTGTGCAGGACATGTCAAAGGGGACACTGGCACAAGCATTaGATTGCTAGTGATCTGTCC +
Preference number: 5 (lower is better)
Translates to: HIFIKMNPGLLCRTCQRGHWHKH*IASDLS
Trigger: GGACAGATCACTAGCAATCAAATGCTTGTGCCAGTG...TCCCCTTTGACATGTCCTGCACAATAACCCTGGATTCATCTTAATAAAGATATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR CAA 90 bp AACTGCATATCACAGTGCTCCCAAAAAGCAGAGAAAAGTCATGACATTACAAGACCTGAAAAGGCTGCATaGAGCAGGCTCATCATTTAC +
Preference number: 5 (lower is better)
Translates to: NCISQCSQKAEKSHDITRPEKAA*SRLIIY
Trigger: GTAAATGATGAGCCTGCTCAATGCAGCCTTTTCAGG...TCTTGTAATGTCATGACTTTTCTCTGCTTTTTGGGAGCACTGTGATATGCAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR CAA 90 bp AAAGGACTTGAATATATGGTGATACTACCTTTAAGAACCTTAGCCCCATCTCAAACATACCAGGGCTGCTaGGATCCCAAAAACCTCAGA +
Preference number: 5 (lower is better)
Translates to: KGLEYMVILPLRTLAPSQTYQGC*DPKNLR
Trigger: TCTGAGGTTTTTGGGATCCAAGCAGCCCTGGTATGT...TTGAGATGGGGCTAAGGTTCTTAAAGGTAGTATCACCATATATTCAAGTCCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR CAA 90 bp AAAGGACTTGAATATATGGTGATACTACCTTTAAGAACCTTAGCCCCATCTCAAGATATGGTTTGGGGCTaGACCATACTGATGGCTCCT +
Preference number: 5 (lower is better)
Translates to: KGLEYMVILPLRTLAPSQDMVWG*TILMAP
Trigger: AGGAGCCATCAGTATGGTCAAGCCCCAAACCATATC...TTGAGATGGGGCTAAGGTTCTTAAAGGTAGTATCACCATATATTCAAGTCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR CAA 90 bp TTGGCTAGGTTCTGTACATGTCACTTTATCATAAAAGTTCTCCTTCTCTTCGATAGAATCCTGCCTGTCTaGTCGACTGCAAGGTTTACA +
Preference number: 5 (lower is better)
Translates to: LARFCTCHFIIKVLLLFDRILPV*STARFT
Trigger: TGTAAACCTTGCAGTCGACAAGACAGGCAGGATTCT...ATCGAAGAGAAGGAGAACTTTTATGATAAAGTGACATGTACAGAACCTAGCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR CAA 90 bp TTGGCTAGGTTCTGTACATGTCACTTTATCATAAAAGTTCTCCTTCTCTTCGATGCCCATAATCTCATGTaGGAATTCCCTCAGGCAAAG +
Preference number: 5 (lower is better)
Translates to: LARFCTCHFIIKVLLLFDAHNLM*EFPQAK
Trigger: CTTTGCCTGAGGGAATTCCAACATGAGATTATGGGC...ATCGAAGAGAAGGAGAACTTTTATGATAAAGTGACATGTACAGAACCTAGCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR CAA 90 bp AAAGGACTTGAATATATGGTGATACTACCTTTAAGAACCTTAGCCCCATCTCAACTCCAGTGGCATGAATaGTGTGCTGCTTGTGTTACA +
Preference number: 5 (lower is better)
Translates to: KGLEYMVILPLRTLAPSQLQWHE*CAACVT
Trigger: TGTAACACAAGCAGCACACAATTCATGCCACTGGAG...TTGAGATGGGGCTAAGGTTCTTAAAGGTAGTATCACCATATATTCAAGTCCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR CAA 90 bp CATATCTTTATTAAGATGAATCCAGGGTTATTGTGCAGGACATGTCAAAGGGGACCGCTGGATTTCATCTaGCAGACTCATTTCAACATT +
Preference number: 5 (lower is better)
Translates to: HIFIKMNPGLLCRTCQRGPLDFI*QTHFNI
Trigger: AATGTTGAAATGAGTCTGCAAGATGAAATCCAGCGG...TCCCCTTTGACATGTCCTGCACAATAACCCTGGATTCATCTTAATAAAGATATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR CAA 90 bp TTGGCTAGGTTCTGTACATGTCACTTTATCATAAAAGTTCTCCTTCTCTTCGATCATATTCACAGGTCATaGTGCGAATACACTGCAGTG +
Preference number: 5 (lower is better)
Translates to: LARFCTCHFIIKVLLLFDHIHRS*CEYTAV
Trigger: CACTGCAGTGTATTCGCACAATGACCTGTGAATATG...ATCGAAGAGAAGGAGAACTTTTATGATAAAGTGACATGTACAGAACCTAGCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR CAA 90 bp AACTGCATATCACAGTGCTCCCAAAAAGCAGAGAAAAGTCATGACATTACAAGATTGCAAAGTTCGGGTTaGCTTCACAGAAAGTCTCTT +
Preference number: 5 (lower is better)
Translates to: NCISQCSQKAEKSHDITRLQSSG*LHRKSL
Trigger: AAGAGACTTTCTGTGAAGCAAACCCGAACTTTGCAA...TCTTGTAATGTCATGACTTTTCTCTGCTTTTTGGGAGCACTGTGATATGCAGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR CAA 90 bp AACTGCATATCACAGTGCTCCCAAAAAGCAGAGAAAAGTCATGACATTACAAGATCCAGCTCACTCGACTaGATCCCTTTAAAAATCTCT +
Preference number: 5 (lower is better)
Translates to: NCISQCSQKAEKSHDITRSSSLD*IPLKIS
Trigger: AGAGATTTTTAAAGGGATCAAGTCGAGTGAGCTGGA...TCTTGTAATGTCATGACTTTTCTCTGCTTTTTGGGAGCACTGTGATATGCAGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR CAA 90 bp AACTGCATATCACAGTGCTCCCAAAAAGCAGAGAAAAGTCATGACATTACAAGATGCAAGGCTCAAGCTTaGAGAGCACAGAAAGATTTT +
Preference number: 5 (lower is better)
Translates to: NCISQCSQKAEKSHDITRCKAQA*RAQKDF
Trigger: AAAATCTTTCTGTGCTCTCAAAGCTTGAGCCTTGCA...TCTTGTAATGTCATGACTTTTCTCTGCTTTTTGGGAGCACTGTGATATGCAGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR CAA 90 bp TTGGCTAGGTTCTGTACATGTCACTTTATCATAAAAGTTCTCCTTCTCTTCGATATGCCCTCCTGGAACTaGTTTTGGTTTGGAAACCAT +
Preference number: 5 (lower is better)
Translates to: LARFCTCHFIIKVLLLFDMPSWN*FWFGNH
Trigger: ATGGTTTCCAAACCAAAACAAGTTCCAGGAGGGCAT...ATCGAAGAGAAGGAGAACTTTTATGATAAAGTGACATGTACAGAACCTAGCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR CAA 90 bp CATATCTTTATTAAGATGAATCCAGGGTTATTGTGCAGGACATGTCAAAGGGGACTGAGCATGCAGAATTaGCATTGGATAGACAGTTAC +
Preference number: 5 (lower is better)
Translates to: HIFIKMNPGLLCRTCQRGLSMQN*HWIDSY
Trigger: GTAACTGTCTATCCAATGCAAATTCTGCATGCTCAG...TCCCCTTTGACATGTCCTGCACAATAACCCTGGATTCATCTTAATAAAGATATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR CAA 90 bp TTGGCTAGGTTCTGTACATGTCACTTTATCATAAAAGTTCTCCTTCTCTTCGATATGAATCCAGGGTTATaGTGCAGGACATGTCAAAGG +
Preference number: 5 (lower is better)
Translates to: LARFCTCHFIIKVLLLFDMNPGL*CRTCQR
Trigger: CCTTTGACATGTCCTGCACAATAACCCTGGATTCAT...ATCGAAGAGAAGGAGAACTTTTATGATAAAGTGACATGTACAGAACCTAGCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR CAA 90 bp AAAGGACTTGAATATATGGTGATACTACCTTTAAGAACCTTAGCCCCATCTCAACATATAACAGGCAGTTaGTGTCCATACAGTGACAGA +
Preference number: 5 (lower is better)
Translates to: KGLEYMVILPLRTLAPSQHITGS*CPYSDR
Trigger: TCTGTCACTGTATGGACACAAACTGCCTGTTATATG...TTGAGATGGGGCTAAGGTTCTTAAAGGTAGTATCACCATATATTCAAGTCCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR CAA 90 bp AAAGGACTTGAATATATGGTGATACTACCTTTAAGAACCTTAGCCCCATCTCAACAAAGTCTCAGAGATTaGTCATGGGACGATGATACA +
Preference number: 5 (lower is better)
Translates to: KGLEYMVILPLRTLAPSQQSLRD*SWDDDT
Trigger: TGTATCATCGTCCCATGACAAATCTCTGAGACTTTG...TTGAGATGGGGCTAAGGTTCTTAAAGGTAGTATCACCATATATTCAAGTCCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR CAA 90 bp AACTGCATATCACAGTGCTCCCAAAAAGCAGAGAAAAGTCATGACATTACAAGACATCTTCATTCATCTTaGAAAGCACCTAGCCAAATC +
Preference number: 5 (lower is better)
Translates to: NCISQCSQKAEKSHDITRHLHSS*KAPSQI
Trigger: GATTTGGCTAGGTGCTTTCAAAGATGAATGAAGATG...TCTTGTAATGTCATGACTTTTCTCTGCTTTTTGGGAGCACTGTGATATGCAGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR CAA 90 bp CATATCTTTATTAAGATGAATCCAGGGTTATTGTGCAGGACATGTCAAAGGGGAGAAAGAACAGCAATATaGTCTGAGCTGAATGACAAA +
Preference number: 5 (lower is better)
Translates to: HIFIKMNPGLLCRTCQRGERTAI*SELNDK
Trigger: TTTGTCATTCAGCTCAGACAATATTGCTGTTCTTTC...TCCCCTTTGACATGTCCTGCACAATAACCCTGGATTCATCTTAATAAAGATATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR CAA 90 bp TTGGCTAGGTTCTGTACATGTCACTTTATCATAAAAGTTCTCCTTCTCTTCGATCTCCTGGAACTTGTTTaGGTTTGGAAACCATCAAAA +
Preference number: 5 (lower is better)
Translates to: LARFCTCHFIIKVLLLFDLLELV*VWKPSK
Trigger: TTTTGATGGTTTCCAAACCAAAACAAGTTCCAGGAG...ATCGAAGAGAAGGAGAACTTTTATGATAAAGTGACATGTACAGAACCTAGCCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR CAA 90 bp CATATCTTTATTAAGATGAATCCAGGGTTATTGTGCAGGACATGTCAAAGGGGAACCAAAAATTGTAACTaGGCTAGGTTCTGTACATGT +
Preference number: 5 (lower is better)
Translates to: HIFIKMNPGLLCRTCQRGTKNCN*ARFCTC
Trigger: ACATGTACAGAACCTAGCCAAGTTACAATTTTTGGT...TCCCCTTTGACATGTCCTGCACAATAACCCTGGATTCATCTTAATAAAGATATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR CAA 90 bp AACTGCATATCACAGTGCTCCCAAAAAGCAGAGAAAAGTCATGACATTACAAGAATCTCTGCTGGAGATTaGCTAGATATCTTTAGAATG +
Preference number: 5 (lower is better)
Translates to: NCISQCSQKAEKSHDITRISAGD*LDIFRM
Trigger: CATTCTAAAGATATCTAGCAAATCTCCAGCAGAGAT...TCTTGTAATGTCATGACTTTTCTCTGCTTTTTGGGAGCACTGTGATATGCAGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS-3UTR CAA 90 bp TTGGCTAGGTTCTGTACATGTCACTTTATCATAAAAGTTCTCCTTCTCTTCGATGCTTTACAAATGGCTTaGTGTTCCTTCATTTTTGCA +
Preference number: 5 (lower is better)
Translates to: LARFCTCHFIIKVLLLFDALQMA*CSFIFA
Trigger: TGCAAAAATGAAGGAACACAAAGCCATTTGTAAAGC...ATCGAAGAGAAGGAGAACTTTTATGATAAAGTGACATGTACAGAACCTAGCCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS CAA 90 bp CTGGAGAGAGGGACATGGACCACAAAGCTCCATCATGTGCATCTATaGTCTCCAGCAGATTCCCTGAAGCCAAGTCATAAAGCTGCAGCT +
Preference number: 6 (lower is better)
Translates to: LERGTWTTKLHHVHL*SPADSLKPSHKAAA
Trigger: AGCTGCAGCTTTATGACTTGGCTTCAGGGAATCTGCTGGAGACAATAGATGCACATGATGGAGCTTTGTGGTCCATGTCCCTCTCTCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS TCA 72 bp CCTGACAGGCTGAGGAGTAGGCAAGGATGGATTCAGTaGATACAATTCCACCAGGTTGTTCTGCAGCAGGAA +
Preference number: 6 (lower is better)
Translates to: PDRLRSRQGWIQ*IQFHQVVLQQE
Trigger: TTCCTGCTGCAGAACAACCTGGTGGAATTGTATTCACTGAATCCATCCTTGCCTACTCCTCAGCCTGTCAGG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS TCA 72 bp CAGCTGCAGCTGAAAGAACAGCAATATTGTCTGAGCTaGATGACAAAGTCCGCACATCACTGCGATGACCCC +
Preference number: 6 (lower is better)
Translates to: QLQLKEQQYCLS*MTKSAHHCDDP
Trigger: GGGGTCATCGCAGTGATGTGCGGACTTTGTCATTCAGCTCAGACAATATTGCTGTTCTTTCAGCTGCAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS GCA 72 bp AAGGTGAGATACTGCCATAAGCCATTAGGATGGGGTTaGTGGGAAGTGGAACCTCTTTCCCTGCAGCTTTAC +
Preference number: 6 (lower is better)
Translates to: KVRYCHKPLGWG*WEVEPLSLQLY
Trigger: GTAAAGCTGCAGGGAAAGAGGTTCCACTTCCCAGCAACCCCATCCTAATGGCTTATGGCAGTATCTCACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS GCA 72 bp ACCCCAGATTTTCACATTCCTATCAGCGGAGCCAGTTaGTATGAGTGCTCCATCATGAGAGATGTCCATGCA +
Preference number: 6 (lower is better)
Translates to: TPDFHIPISGAS*YECSIMRDVHA
Trigger: TGCATGGACATCTCTCATGATGGAGCACTCATAGCAACTGGCTCCGCTGATAGGAATGTGAAAATCTGGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS TCA 72 bp TCTCTCCCAAAGTCTCAGAGATTTGTCATGGGACGATaGTACAACATAGTCTCCACTGGGGCTTACAGCCAA +
Preference number: 6 (lower is better)
Translates to: SLPKSQRFVMGR*YNIVSTGAYSQ
Trigger: TTGGCTGTAAGCCCCAGTGGAGACTATGTTGTATCATCGTCCCATGACAAATCTCTGAGACTTTGGGAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS CAA 72 bp GGGACATGGACCACAAAGCTCCATCATGTGCATCTATaGTCTCCAGCAGATTCCCTGAAGCCAAGTCATAAA +
Preference number: 6 (lower is better)
Translates to: GTWTTKLHHVHL*SPADSLKPSHK
Trigger: TTTATGACTTGGCTTCAGGGAATCTGCTGGAGACAATAGATGCACATGATGGAGCTTTGTGGTCCATGTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS CCA 72 bp ATTTGTCATGGGACGATGATACAACATAGTCTCCACTaGGGCTTACAGCCAAACACCATATTTCCTGGTGAT +
Preference number: 6 (lower is better)
Translates to: ICHGTMIQHSLH*GLQPNTIFPGD
Trigger: ATCACCAGGAAATATGGTGTTTGGCTGTAAGCCCCAGTGGAGACTATGTTGTATCATCGTCCCATGACAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS CAA 72 bp TTAATGGAATCAGCTGCAGCTGAAAGAACAGCAATATaGTCTGAGCTGAATGACAAAGTCCGCACATCACTG +
Preference number: 6 (lower is better)
Translates to: LMESAAAERTAI*SELNDKVRTSL
Trigger: CAGTGATGTGCGGACTTTGTCATTCAGCTCAGACAATATTGCTGTTCTTTCAGCTGCAGCTGATTCCATTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS CAA 90 bp TTGCTGGGAAGTGGAACCTCTTTCCCTGCAGCTTTACAAATGGCTTaGTGTTCCTTCATTTTTGCAGTTTCTTCTCGGTACAACTCAATA +
Preference number: 6 (lower is better)
Translates to: LLGSGTSFPAALQMA*CSFIFAVSSRYNSI
Trigger: TATTGAGTTGTACCGAGAAGAAACTGCAAAAATGAAGGAACACAAAGCCATTTGTAAAGCTGCAGGGAAAGAGGTTCCACTTCCCAGCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS TCA 72 bp TCCTATGACTACCTGTCTATCACCAGGTACAAAGAATaGGCAAAGTGCATATTCACAGGTCATTGTGCGAAT +
Preference number: 6 (lower is better)
Translates to: SYDYLSITRYKE*AKCIFTGHCAN
Trigger: ATTCGCACAATGACCTGTGAATATGCACTTTGCTCATTCTTTGTACCTGGTGATAGACAGGTAGTCATAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS GCA 72 bp ATGACCCTCCAGAGTCTGTATGTGTTCAAATTTGTCTaGATCCCACTGTTTAATCTTATGATCTTTTCCGGC +
Preference number: 6 (lower is better)
Translates to: MTLQSLYVFKFV*IPLFNLMIFSG
Trigger: GCCGGAAAAGATCATAAGATTAAACAGTGGGATGCAGACAAATTTGAACACATACAGACTCTGGAGGGTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS TCA 72 bp AAGACACAGCCAATAGCTTTTGATTGGGAGAGTAACTaGCACACAGAACATCTTCATCTAGTTGCAAAGTTC +
Preference number: 6 (lower is better)
Translates to: KTQPIAFDWESN*HTEHLHLVAKF
Trigger: GAACTTTGCAACTAGATGAAGATGTTCTGTGTGTCAGTTACTCTCCCAATCAAAAGCTATTGGCTGTGTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS CAA 72 bp TTCAATAGTTTTCTTTCCAGTAAAGTAACTGTCACCTaGAGTCTCTCCTGGAACTGCTGGTTGGTCTTCTTT +
Preference number: 6 (lower is better)
Translates to: FNSFLSSKVTVT*SLSWNCWLVFF
Trigger: AAAGAAGACCAACCAGCAGTTCCAGGAGAGACTCAAGGTGACAGTTACTTTACTGGAAAGAAAACTATTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS GCA 72 bp CACAGAACATCTTCATCTAGTTGCAAAGTTCGGGTTTaGTTCACAGAAAGTCTCTTTTGGGTACTATTTTCA +
Preference number: 6 (lower is better)
Translates to: HRTSSSSCKVRV*FTESLFWVLFS
Trigger: TGAAAATAGTACCCAAAAGAGACTTTCTGTGAAGCAAACCCGAACTTTGCAACTAGATGAAGATGTTCTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349139.6
CDS CAA 72 bp AGAAGTTTTTATATTAGTCACCCGCTGGATTTCATCTaGCAGACTCATTTCAACATTAACCTCAGGATCTTC +
Preference number: 6 (lower is better)
Translates to: RSFYISHPLDFI*QTHFNINLRIF
Trigger: GAAGATCCTGAGGTTAATGTTGAAATGAGTCTGCAAGATGAAATCCAGCGGGTGACTAATATAAAAACTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000349139.6