RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for WDR26 (Homo sapiens)

Ensembl gene IDs: ENSG00000162923

Ensembl transcript IDs: ENST00000414423.9, ENST00000443112.6, ENST00000445239.1, ENST00000477425.1, ENST00000479727.1, ENST00000479778.1, ENST00000480676.2, ENST00000486652.5, ENST00000489825.5, ENST00000651911.2, ENST00000678307.1, ENST00000678555.1, ENST00000678879.1, ENST00000678917.1

Found 805 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCGGCGTCAATTCACAGCGTAGAACTTGAAGTGCCTCCAGGACCTTaGCATCCTCCAGGTATTCTAGGTACTTCTGCTGCAGCAGCAAAA +
Preference number: 1 (lower is better)
Translates to: AASIHSVELEVPPGP*HPPGILGTSAAAAK
Trigger: TTTTGCTGCTGCAGCAGAAGTACCTAGAATACCTGGAGGATGGCAAGGTCCTGGAGGCACTTCAAGTTCTACGCTGTGAATTGACGCCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486652.5
3UTR GCA 90 bp GATGGAATCTGTGGGTTCCAGCTCACACAGTTTACTGTACGTGTGTaGCCTGTCAGCTCCGCAATTGGCAGTTCACTACGTTTGTGCCAG +
Preference number: 1 (lower is better)
Translates to: DGICGFQLTQFTVRV*PVSSAIGSSLRLCQ
Trigger: CTGGCACAAACGTAGTGAACTGCCAATTGCGGAGCTGACAGGGCACACACGTACAGTAAACTGTGTGAGCTGGAACCCACAGATTCCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486652.5
3UTR TCA 90 bp GTCTATAAAAGGTGCTGGTCCCCATATTCTAACAGTGCCATCATCTaGGGCGCTGGCCATCATGGATGGAATCTGTGGGTTCCAGCTCAC +
Preference number: 1 (lower is better)
Translates to: VYKRCWSPYSNSAII*GAGHHGWNLWVPAH
Trigger: GTGAGCTGGAACCCACAGATTCCATCCATGATGGCCAGCGCCTCAGATGATGGCACTGTTAGAATATGGGGACCAGCACCTTTTATAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486652.5
3UTR CCA 90 bp ATAGAACTGCCCACGCTGACCTCCAGTCACAAAGCGCTTCCCATCTaGATTCCAAGCCACACTTGTCAAACTGTCTTCATGAGACTGGCT +
Preference number: 1 (lower is better)
Translates to: IELPTLTSSHKALPI*IPSHTCQTVFMRLA
Trigger: AGCCAGTCTCATGAAGACAGTTTGACAAGTGTGGCTTGGAATCCAGATGGGAAGCGCTTTGTGACTGGAGGTCAGCGTGGGCAGTTCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486652.5
3UTR TCA 90 bp CGCTCTGTATTGTATTTCAGCGGCGTCAATTCACAGCGTAGAACTTaGAGTGCCTCCAGGACCTTGCCATCCTCCAGGTATTCTAGGTAC +
Preference number: 1 (lower is better)
Translates to: RSVLYFSGVNSQRRT*SASRTLPSSRYSRY
Trigger: GTACCTAGAATACCTGGAGGATGGCAAGGTCCTGGAGGCACTTCAAGTTCTACGCTGTGAATTGACGCCGCTGAAATACAATACAGAGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486652.5
3UTR TCA 90 bp TGTAAGGTCCTCGAAGTTATAGCCCCGAATTCGCTGGTGTGTATCTaGTGCCAGAACAGTCTTTCCATCACTCAAGCACCAAAGGCATTG +
Preference number: 1 (lower is better)
Translates to: CKVLEVIAPNSLVCI*CQNSLSITQAPKAL
Trigger: CAATGCCTTTGGTGCTTGAGTGATGGAAAGACTGTTCTGGCATCAGATACACACCAGCGAATTCGGGGCTATAACTTCGAGGACCTTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486652.5
3UTR GCA 90 bp TCTGATGCCAGAACAGTCTTTCCATCACTCAAGCACCAAAGGCATTaGACTCTTACCCCTTCCCAGGAGTCAAGGAGATTACCATCTAAG +
Preference number: 1 (lower is better)
Translates to: SDARTVFPSLKHQRH*TLTPSQESRRLPSK
Trigger: CTTAGATGGTAATCTCCTTGACTCCTGGGAAGGGGTAAGAGTGCAATGCCTTTGGTGCTTGAGTGATGGAAAGACTGTTCTGGCATCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486652.5
3UTR GCA 90 bp AGTGCCAAATTGCCCCTGAATGGGCACAAATCTGAGTGTTACAAATaGACCGTAGCACACTGTAACCAAATTTGTAAACAGCTGTGGAGT +
Preference number: 1 (lower is better)
Translates to: SAKLPLNGHKSECYK*TVAHCNQICKQLWS
Trigger: ACTCCACAGCTGTTTACAAATTTGGTTACAGTGTGCTACGGTGCATTTGTAACACTCAGATTTGTGCCCATTCAGGGGCAATTTGGCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
3UTR GCA 90 bp AGTATATACTGCGCAACGGGCAAGGCTAGAATCCATGAACCAAGCTaGAAAGATCTCAAGCTAAATAAGGCGGAAAGATTTGGAGAAACA +
Preference number: 1 (lower is better)
Translates to: SIYCATGKARIHEPS*KDLKLNKAERFGET
Trigger: TGTTTCTCCAAATCTTTCCGCCTTATTTAGCTTGAGATCTTTGCAGCTTGGTTCATGGATTCTAGCCTTGCCCGTTGCGCAGTATATACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
3UTR GCA 90 bp GCTTTTGACATAGTTCACTGGTTTATCATCTGGATCAGTATATACTaGGCAACGGGCAAGGCTAGAATCCATGAACCAAGCTGCAAAGAT +
Preference number: 1 (lower is better)
Translates to: AFDIVHWFIIWISIY*ATGKARIHEPSCKD
Trigger: ATCTTTGCAGCTTGGTTCATGGATTCTAGCCTTGCCCGTTGCGCAGTATATACTGATCCAGATGATAAACCAGTGAACTATGTCAAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
3UTR CCA 90 bp ATAGTTTTCTTGTACATTCCAAAGCCAAAGCTCAGAGCAGTCATCTaGGCCACAAGCAACAAGATAGTTGTCATCTGGACTCCATGCAAT +
Preference number: 1 (lower is better)
Translates to: IVFLYIPKPKLRAVI*ATSNKIVVIWTPCN
Trigger: ATTGCATGGAGTCCAGATGACAACTATCTTGTTGCTTGTGGCCCAGATGACTGCTCTGAGCTTTGGCTTTGGAATGTACAAGAAAACTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486652.5
3UTR TCA 90 bp CCATTGATTTCACCTTTCGAGCACAGTCACTGCATGGCAAATGTATaGAACAGACGTTTACAGCAAATAAGTACCAGTATGTACAGGAAG +
Preference number: 1 (lower is better)
Translates to: PLISPFEHSHCMANV*NRRLQQISTSMYRK
Trigger: CTTCCTGTACATACTGGTACTTATTTGCTGTAAACGTCTGTTTCATACATTTGCCATGCAGTGACTGTGCTCGAAAGGTGAAATCAATGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
3UTR CCA 90 bp TGTAATATTGAGAGTGCTTTTGACATAGTTCACTGGTTTATCATCTaGATCAGTATATACTGCGCAACGGGCAAGGCTAGAATCCATGAA +
Preference number: 1 (lower is better)
Translates to: CNIESAFDIVHWFII*ISIYCATGKARIHE
Trigger: TTCATGGATTCTAGCCTTGCCCGTTGCGCAGTATATACTGATCCAGATGATAAACCAGTGAACTATGTCAAAAGCACTCTCAATATTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
3UTR CCA 90 bp CCCCACAATGGAAGAATTTTTGACATCCAAGCCCTCTTCTCTTTGTaGATTCTGGAGTCTATTCATGATCATAATTATATTATAGACTTG +
Preference number: 1 (lower is better)
Translates to: PHNGRIFDIQALFSL*ILESIHDHNYIIDL
Trigger: CAAGTCTATAATATAATTATGATCATGAATAGACTCCAGAATCCACAAAGAGAAGAGGGCTTGGATGTCAAAAATTCTTCCATTGTGGGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
3UTR TCA 90 bp AATCTAGTCTTGATTCCATTTTGTTCATGGATTAGAAACAGGATCTaGGAGATAATAGCTGCCCTTGGTGTAATAATAAAAGGTACATGG +
Preference number: 1 (lower is better)
Translates to: NLVLIPFCSWIRNRI*EIIAALGVIIKGTW
Trigger: CCATGTACCTTTTATTATTACACCAAGGGCAGCTATTATCTCTCAGATCCTGTTTCTAATCCATGAACAAAATGGAATCAAGACTAGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486652.5
3UTR-3UTR GCA 90 bp CTTTCCATCACTCAAGCACCAAAGGCATTGCACTCTTACCCCTTCCCAGGAGTCTGTAGTTCCACCGCCTaGCGCAGGAGAGTCTGTAAA +
Preference number: 2 (lower is better)
Translates to: LSITQAPKALHSYPFPGVCSSTA*RRRVCK
Trigger: TTTACAGACTCTCCTGCGGCAGGCGGTGGAACTACA...GACTCCTGGGAAGGGGTAAGAGTGCAATGCCTTTGGTGCTTGAGTGATGGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486652.5
3UTR-3UTR TCA 90 bp GCCATCATGGATGGAATCTGTGGGTTCCAGCTCACACAGTTTACTGTACGTGTGTCACAGCGTAGAACTTaGAGTGCCTCCAGGACCTTG +
Preference number: 2 (lower is better)
Translates to: AIMDGICGFQLTQFTVRVSQRRT*SASRTL
Trigger: CAAGGTCCTGGAGGCACTTCAAGTTCTACGCTGTGA...CACACGTACAGTAAACTGTGTGAGCTGGAACCCACAGATTCCATCCATGATGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486652.5
3UTR CAA 90 bp AGCTCACACAGTTTACTGTACGTGTGTGCCCTGTCAGCTCCGCAATaGGCAGTTCACTACGTTTGTGCCAGATGTAAACCTTGTGATCTT +
Preference number: 2 (lower is better)
Translates to: SSHSLLYVCALSAPQ*AVHYVCARCKPCDL
Trigger: AAGATCACAAGGTTTACATCTGGCACAAACGTAGTGAACTGCCAATTGCGGAGCTGACAGGGCACACACGTACAGTAAACTGTGTGAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486652.5
3UTR CAA 90 bp GACCTCCAGTCACAAAGCGCTTCCCATCTGGATTCCAAGCCACACTaGTCAAACTGTCTTCATGAGACTGGCTCATTTTTGTCCTTAGTT +
Preference number: 2 (lower is better)
Translates to: DLQSQSASHLDSKPH*SNCLHETGSFLSLV
Trigger: AACTAAGGACAAAAATGAGCCAGTCTCATGAAGACAGTTTGACAAGTGTGGCTTGGAATCCAGATGGGAAGCGCTTTGTGACTGGAGGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486652.5
3UTR-3UTR GCA 90 bp TACTGCGCAACGGGCAAGGCTAGAATCCATGAACCAAGCTGCAAAGATCTCAAGAACGTTCTAACGACGTaGTTCATCTCAACTGGTTAC +
Preference number: 2 (lower is better)
Translates to: YCATGKARIHEPSCKDLKNVLTT*FISTGY
Trigger: GTAACCAGTTGAGATGAAGCACGTCGTTAGAACGTT...CTTGAGATCTTTGCAGCTTGGTTCATGGATTCTAGCCTTGCCCGTTGCGCAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
3UTR-3UTR CCA 90 bp GCACAGTTCTTCACAACCGATGGGGGAATAATTCAACATGGTGTCCAACAACGTCAAGGTGTAAATGTTTaGCCCCAATCGGGCTTCAGA +
Preference number: 2 (lower is better)
Translates to: AQFFTTDGGIIQHGVQQRQGVNV*PQSGFR
Trigger: TCTGAAGCCCGATTGGGGCCAAACATTTACACCTTG...ACGTTGTTGGACACCATGTTGAATTATTCCCCCATCGGTTGTGAAGAACTGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
3UTR-3UTR CCA 90 bp TACTGCGCAACGGGCAAGGCTAGAATCCATGAACCAAGCTGCAAAGATCTCAAGGAAGAGCAACAAGAATaGTATCCTGCCAGACAAAAG +
Preference number: 2 (lower is better)
Translates to: YCATGKARIHEPSCKDLKEEQQE*YPARQK
Trigger: CTTTTGTCTGGCAGGATACCATTCTTGTTGCTCTTC...CTTGAGATCTTTGCAGCTTGGTTCATGGATTCTAGCCTTGCCCGTTGCGCAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
3UTR-3UTR GCA 90 bp CTTCCCATCTGGATTCCAAGCCACACTTGTCAAACTGTCTTCATGAGACTGGCTCACACTTCATTACAATaGTCCGTAAGTATCTGCTGC +
Preference number: 2 (lower is better)
Translates to: LPIWIPSHTCQTVFMRLAHTSLQ*SVSICC
Trigger: GCAGCAGATACTTACGGAGCATTGTAATGAAGTGTG...AGCCAGTCTCATGAAGACAGTTTGACAAGTGTGGCTTGGAATCCAGATGGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486652.5
3UTR-3UTR CCA 90 bp GACATAGTTCACTGGTTTATCATCTGGATCAGTATATACTGCGCAACGGGCAAGCAAGGTGTAAATGTTTaGCCCCAATCGGGCTTCAGA +
Preference number: 2 (lower is better)
Translates to: DIVHWFIIWISIYCATGKQGVNV*PQSGFR
Trigger: TCTGAAGCCCGATTGGGGCCAAACATTTACACCTTG...CTTGCCCGTTGCGCAGTATATACTGATCCAGATGATAAACCAGTGAACTATGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
3UTR-3UTR CCA 90 bp ATCTGGATCAGTATATACTGCGCAACGGGCAAGGCTAGAATCCATGAACCAAGCGAAGAGCAACAAGAATaGTATCCTGCCAGACAAAAG +
Preference number: 2 (lower is better)
Translates to: IWISIYCATGKARIHEPSEEQQE*YPARQK
Trigger: CTTTTGTCTGGCAGGATACCATTCTTGTTGCTCTTC...GCTTGGTTCATGGATTCTAGCCTTGCCCGTTGCGCAGTATATACTGATCCAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
3UTR-3UTR CCA 90 bp TTCACTGGTTTATCATCTGGATCAGTATATACTGCGCAACGGGCAAGGCTAGAACGTAGGTCTTCTGCATaGCTACACATCAGATACCCA +
Preference number: 2 (lower is better)
Translates to: FTGLSSGSVYTAQRARLERRSSA*LHIRYP
Trigger: TGGGTATCTGATGTGTAGCCATGCAGAAGACCTACG...TTCTAGCCTTGCCCGTTGCGCAGTATATACTGATCCAGATGATAAACCAGTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486652.5
3UTR-3UTR TCA 90 bp ATCTGGATCAGTATATACTGCGCAACGGGCAAGGCTAGAATCCATGAACCAAGCAGCACCAGTTTAGAATaGGGTTCAGTATGGCAATAT +
Preference number: 2 (lower is better)
Translates to: IWISIYCATGKARIHEPSSTSLE*GSVWQY
Trigger: ATATTGCCATACTGAACCTCATTCTAAACTGGTGCT...GCTTGGTTCATGGATTCTAGCCTTGCCCGTTGCGCAGTATATACTGATCCAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
3UTR-3UTR GCA 90 bp TACTGCGCAACGGGCAAGGCTAGAATCCATGAACCAAGCTGCAAAGATCTCAAGTCAATCATGTTTGTTTaGACCAAATCCCAAGCCATT +
Preference number: 2 (lower is better)
Translates to: YCATGKARIHEPSCKDLKSIMFV*TKSQAI
Trigger: AATGGCTTGGGATTTGGTGCAAACAAACATGATTGA...CTTGAGATCTTTGCAGCTTGGTTCATGGATTCTAGCCTTGCCCGTTGCGCAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
3UTR-3UTR GCA 90 bp AGTACCAGTATGTACAGGAAGCTGCCAGTTAAGACAGACCCGGAAAACAAACTCAACGTTCTAACGACGTaGTTCATCTCAACTGGTTAC +
Preference number: 2 (lower is better)
Translates to: STSMYRKLPVKTDPENKLNVLTT*FISTGY
Trigger: GTAACCAGTTGAGATGAAGCACGTCGTTAGAACGTT...GAGTTTGTTTTCCGGGTCTGTCTTAACTGGCAGCTTCCTGTACATACTGGTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
3UTR-3UTR GCA 90 bp AGTACCAGTATGTACAGGAAGCTGCCAGTTAAGACAGACCCGGAAAACAAACTCACAAGAATGGTATCCTaGCAGACAAAAGACAGGAAG +
Preference number: 2 (lower is better)
Translates to: STSMYRKLPVKTDPENKLTRMVS*QTKDRK
Trigger: CTTCCTGTCTTTTGTCTGGCAGGATACCATTCTTGT...GAGTTTGTTTTCCGGGTCTGTCTTAACTGGCAGCTTCCTGTACATACTGGTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
3UTR-3UTR CCA 90 bp GTGCACGAGACTTTCAGTAAAAATGACAAGATCCTAGAACAGCTGTTTCCAGGACAAGGTGTAAATGTTTaGCCCCAATCGGGCTTCAGA +
Preference number: 2 (lower is better)
Translates to: VHETFSKNDKILEQLFPGQGVNV*PQSGFR
Trigger: TCTGAAGCCCGATTGGGGCCAAACATTTACACCTTG...TCCTGGAAACAGCTGTTCTAGGATCTTGTCATTTTTACTGAAAGTCTCGTGCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
3UTR-3UTR CCA 90 bp GTTCACTGGTTTATCATCTGGATCAGTATATACTGCGCAACGGGCAAGGCTAGAGTTCTTCACAACCGATaGGGGAATAATTCAACATGG +
Preference number: 2 (lower is better)
Translates to: VHWFIIWISIYCATGKARVLHNR*GNNSTW
Trigger: CCATGTTGAATTATTCCCCCATCGGTTGTGAAGAAC...TCTAGCCTTGCCCGTTGCGCAGTATATACTGATCCAGATGATAAACCAGTGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
3UTR-3UTR CCA 90 bp ACAGAAGTCGTCTGCTCCAAATTCACCATCAACTATCCATGCTACTGCATTCCTCTGCTGCGTATAACATaGGAACTGCCTCCTTTAAGT +
Preference number: 2 (lower is better)
Translates to: TEVVCSKFTINYPCYCIPLLRIT*ELPPLS
Trigger: ACTTAAAGGAGGCAGTTCCCATGTTATACGCAGCAG...AGGAATGCAGTAGCATGGATAGTTGATGGTGAATTTGGAGCAGACGACTTCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486652.5
3UTR-3UTR TCA 90 bp ATCTGGATCAGTATATACTGCGCAACGGGCAAGGCTAGAATCCATGAACCAAGCTTTAAAAGCACAATGTaGACATCAGGCTTTTGGCTT +
Preference number: 2 (lower is better)
Translates to: IWISIYCATGKARIHEPSFKSTM*TSGFWL
Trigger: AAGCCAAAAGCCTGATGTTCACATTGTGCTTTTAAA...GCTTGGTTCATGGATTCTAGCCTTGCCCGTTGCGCAGTATATACTGATCCAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
3UTR-3UTR TCA 90 bp TCTGAAATGGAAGTAATGTGTTGGAGGGCAACCCAAAAGGACAGTTGCGAAATTTACAAAAACCAAAGCTaGAGCTTTGTCATCCCTCCC +
Preference number: 2 (lower is better)
Translates to: SEMEVMCWRATQKDSCEIYKNQS*SFVIPP
Trigger: GGGAGGGATGACAAAGCTTCAGCTTTGGTTTTTGTA...AATTTCGCAACTGTCCTTTTGGGTTGCCCTCCAACACATTACTTCCATTTCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
3UTR-3UTR TCA 90 bp CATGCTACTGCATTCCTCTTCAATATTCTGGTGGTCTATAAAAGGTGCTGGTCCCCTTTAAGTGTATCTTaGAACACGGTCTTCCTTGCT +
Preference number: 2 (lower is better)
Translates to: HATAFLFNILVVYKRCWSPLSVS*NTVFLA
Trigger: AGCAAGGAAGACCGTGTTTCAAGATACACTTAAAGG...GGACCAGCACCTTTTATAGACCACCAGAATATTGAAGAGGAATGCAGTAGCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486652.5
3UTR-3UTR GCA 90 bp TTACCCCTTCCCAGGAGTCAAGGAGATTACCATCTAAGTCACACTGATAGAACTAACGTTCTAACGACGTaGTTCATCTCAACTGGTTAC +
Preference number: 2 (lower is better)
Translates to: LPLPRSQGDYHLSHTDRTNVLTT*FISTGY
Trigger: GTAACCAGTTGAGATGAAGCACGTCGTTAGAACGTT...AGTTCTATCAGTGTGACTTAGATGGTAATCTCCTTGACTCCTGGGAAGGGGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486652.5
3UTR-3UTR GCA 90 bp CTGAATGTAGCACAGTTCTTCACAACCGATGGGGGAATAATTCAACATGGTGTCACAAGAATGGTATCCTaGCAGACAAAAGACAGGAAG +
Preference number: 2 (lower is better)
Translates to: LNVAQFFTTDGGIIQHGVTRMVS*QTKDRK
Trigger: CTTCCTGTCTTTTGTCTGGCAGGATACCATTCTTGT...GACACCATGTTGAATTATTCCCCCATCGGTTGTGAAGAACTGTGCTACATTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
3UTR-3UTR GCA 90 bp GTTTCTGACCATGTCTCATGTGGTATTCCAGAAGAGCATCAGTTATACTGTGTATGGATCAGTATATACTaGGCAACGGGCAAGGCTAGA +
Preference number: 2 (lower is better)
Translates to: VSDHVSCGIPEEHQLYCVWISIY*ATGKAR
Trigger: TCTAGCCTTGCCCGTTGCGCAGTATATACTGATCCA...TACACAGTATAACTGATGCTCTTCTGGAATACCACATGAGACATGGTCAGAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
3UTR-3UTR GCA 90 bp TTAAGACAGACCCGGAAAACAAACTCACCTAGCTGCTATAGAAACCTTTGCATATGGATCAGTATATACTaGGCAACGGGCAAGGCTAGA +
Preference number: 2 (lower is better)
Translates to: LRQTRKTNSPSCYRNLCIWISIY*ATGKAR
Trigger: TCTAGCCTTGCCCGTTGCGCAGTATATACTGATCCA...TATGCAAAGGTTTCTATAGCAGCTAGGTGAGTTTGTTTTCCGGGTCTGTCTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
3UTR-3UTR GCA 90 bp GTGGTTGTATCGCTGATTCCTACTCTTTTGCTAGATCACACCAAAATTACTTCCTGGATCAGTATATACTaGGCAACGGGCAAGGCTAGA +
Preference number: 2 (lower is better)
Translates to: VVVSLIPTLLLDHTKITSWISIY*ATGKAR
Trigger: TCTAGCCTTGCCCGTTGCGCAGTATATACTGATCCA...GGAAGTAATTTTGGTGTGATCTAGCAAAAGAGTAGGAATCAGCGATACAACCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
3UTR-3UTR GCA 90 bp TCCTATCCAATGTATACTCTTCAGACTAATGCACTCTTTCTATCAAGCCTTCTAGTGCCTCCAGGACCTTaGCATCCTCCAGGTATTCTA +
Preference number: 2 (lower is better)
Translates to: SYPMYTLQTNALFLSSLLVPPGP*HPPGIL
Trigger: TAGAATACCTGGAGGATGGCAAGGTCCTGGAGGCAC...TAGAAGGCTTGATAGAAAGAGTGCATTAGTCTGAAGAGTATACATTGGATAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486652.5
3UTR-3UTR GCA 90 bp CTTCCCATCTGGATTCCAAGCCACACTTGTCAAACTGTCTTCATGAGACTGGCTGTATCCGGATCAACTTaGCATATGATAACTGTTGTA +
Preference number: 2 (lower is better)
Translates to: LPIWIPSHTCQTVFMRLAVSGST*HMITVV
Trigger: TACAACAGTTATCATATGGCAAGTTGATCCGGATAC...AGCCAGTCTCATGAAGACAGTTTGACAAGTGTGGCTTGGAATCCAGATGGGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486652.5
3UTR-3UTR CCA 90 bp ATTCACCATCAACTATCCATGCTACTGCATTCCTCTTCAATATTCTGGTGGTCTCAAGGTGTAAATGTTTaGCCCCAATCGGGCTTCAGA +
Preference number: 2 (lower is better)
Translates to: IHHQLSMLLHSSSIFWWSQGVNV*PQSGFR
Trigger: TCTGAAGCCCGATTGGGGCCAAACATTTACACCTTG...AGACCACCAGAATATTGAAGAGGAATGCAGTAGCATGGATAGTTGATGGTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486652.5
3UTR-3UTR CCA 90 bp CTGAATGTAGCACAGTTCTTCACAACCGATGGGGGAATAATTCAACATGGTGTCGTTCTTCACAACCGATaGGGGAATAATTCAACATGG +
Preference number: 2 (lower is better)
Translates to: LNVAQFFTTDGGIIQHGVVLHNR*GNNSTW
Trigger: CCATGTTGAATTATTCCCCCATCGGTTGTGAAGAAC...GACACCATGTTGAATTATTCCCCCATCGGTTGTGAAGAACTGTGCTACATTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
3UTR-3UTR CCA 90 bp TTCACTGGTTTATCATCTGGATCAGTATATACTGCGCAACGGGCAAGGCTAGAATCTCATTCCAACAGCTaGAGTCACCCTATTTATCCT +
Preference number: 2 (lower is better)
Translates to: FTGLSSGSVYTAQRARLESHSNS*SHPIYP
Trigger: AGGATAAATAGGGTGACTCCAGCTGTTGGAATGAGA...TTCTAGCCTTGCCCGTTGCGCAGTATATACTGATCCAGATGATAAACCAGTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
3UTR-3UTR TCA 90 bp GTGGTTGTATCGCTGATTCCTACTCTTTTGCTAGATCACACCAAAATTACTTCCTCCAAGCACTGTTTCTaGCCATGTCTCATGTGGTAT +
Preference number: 2 (lower is better)
Translates to: VVVSLIPTLLLDHTKITSSKHCF*PCLMWY
Trigger: ATACCACATGAGACATGGTCAGAAACAGTGCTTGGA...GGAAGTAATTTTGGTGTGATCTAGCAAAAGAGTAGGAATCAGCGATACAACCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
3UTR-3UTR TCA 90 bp GACATAGTTCACTGGTTTATCATCTGGATCAGTATATACTGCGCAACGGGCAAGTTCAAGATCGGGTACTaGTGTTCCTTCAGGAATAAA +
Preference number: 2 (lower is better)
Translates to: DIVHWFIIWISIYCATGKFKIGY*CSFRNK
Trigger: TTTATTCCTGAAGGAACATCAGTACCCGATCTTGAA...CTTGCCCGTTGCGCAGTATATACTGATCCAGATGATAAACCAGTGAACTATGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
3UTR-3UTR TCA 90 bp TTCACTGGTTTATCATCTGGATCAGTATATACTGCGCAACGGGCAAGGCTAGAAAAACCAACTGACTACTaGTGTCTCATGTTGGTGTAT +
Preference number: 2 (lower is better)
Translates to: FTGLSSGSVYTAQRARLEKPTDY*CLMLVY
Trigger: ATACACCAACATGAGACATCAGTAGTCAGTTGGTTT...TTCTAGCCTTGCCCGTTGCGCAGTATATACTGATCCAGATGATAAACCAGTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
3UTR-3UTR TCA 90 bp ATCAGTATATACTGCGCAACGGGCAAGGCTAGAATCCATGAACCAAGCTGCAAATTACTGAAAACCAACTaGCTACTGATGTCTCATGTT +
Preference number: 2 (lower is better)
Translates to: ISIYCATGKARIHEPSCKLLKTN*LLMSHV
Trigger: AACATGAGACATCAGTAGTCAGTTGGTTTTCAGTAA...TTTGCAGCTTGGTTCATGGATTCTAGCCTTGCCCGTTGCGCAGTATATACTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
3UTR-3UTR TCA 90 bp GTTCACTGGTTTATCATCTGGATCAGTATATACTGCGCAACGGGCAAGGCTAGACTATTTATCCTCTACTaGAAAAGGGAGGGAATTTCA +
Preference number: 2 (lower is better)
Translates to: VHWFIIWISIYCATGKARLFILY*KREGIS
Trigger: TGAAATTCCCTCCCTTTTTCAGTAGAGGATAAATAG...TCTAGCCTTGCCCGTTGCGCAGTATATACTGATCCAGATGATAAACCAGTGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
3UTR-3UTR TCA 90 bp TCTGAAATGGAAGTAATGTGTTGGAGGGCAACCCAAAAGGACAGTTGCGAAATTCAATGGAAGAATTTTTaGCATCCAAGCCCTCTTCTC +
Preference number: 2 (lower is better)
Translates to: SEMEVMCWRATQKDSCEIQWKNF*HPSPLL
Trigger: GAGAAGAGGGCTTGGATGTCAAAAATTCTTCCATTG...AATTTCGCAACTGTCCTTTTGGGTTGCCCTCCAACACATTACTTCCATTTCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
3UTR-3UTR GCA 90 bp CTGGATTCCAAGCCACACTTGTCAAACTGTCTTCATGAGACTGGCTCATTTTTGGTCATCTGGACTCCATaGAATATAAGAAACGCCATA +
Preference number: 2 (lower is better)
Translates to: LDSKPHLSNCLHETGSFLVIWTP*NIRNAI
Trigger: TATGGCGTTTCTTATATTGCATGGAGTCCAGATGAC...CAAAAATGAGCCAGTCTCATGAAGACAGTTTGACAAGTGTGGCTTGGAATCCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486652.5
3UTR-3UTR CCA 90 bp CTGAATGTAGCACAGTTCTTCACAACCGATGGGGGAATAATTCAACATGGTGTCCACTGGTTTATCATCTaGATCAGTATATACTGCGCA +
Preference number: 2 (lower is better)
Translates to: LNVAQFFTTDGGIIQHGVHWFII*ISIYCA
Trigger: TGCGCAGTATATACTGATCCAGATGATAAACCAGTG...GACACCATGTTGAATTATTCCCCCATCGGTTGTGAAGAACTGTGCTACATTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
3UTR-3UTR CCA 90 bp GACATAGTTCACTGGTTTATCATCTGGATCAGTATATACTGCGCAACGGGCAAGCACTGGTTTATCATCTaGATCAGTATATACTGCGCA +
Preference number: 2 (lower is better)
Translates to: DIVHWFIIWISIYCATGKHWFII*ISIYCA
Trigger: TGCGCAGTATATACTGATCCAGATGATAAACCAGTG...CTTGCCCGTTGCGCAGTATATACTGATCCAGATGATAAACCAGTGAACTATGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
3UTR-3UTR CCA 90 bp AAAGGCATTGCACTCTTACCCCTTCCCAGGAGTCAAGGAGATTACCATCTAAGTAGTCTACTACAAACATaGTCTATAAGCAGAGACACA +
Preference number: 2 (lower is better)
Translates to: KGIALLPLPRSQGDYHLSSLLQT*SISRDT
Trigger: TGTGTCTCTGCTTATAGACCATGTTTGTAGTAGACT...ACTTAGATGGTAATCTCCTTGACTCCTGGGAAGGGGTAAGAGTGCAATGCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486652.5
3UTR-3UTR TCA 90 bp TTCACTGGTTTATCATCTGGATCAGTATATACTGCGCAACGGGCAAGGCTAGAAAATTACTTCCTAAGTTaGGAACAACTTGGAACAAGC +
Preference number: 2 (lower is better)
Translates to: FTGLSSGSVYTAQRARLENYFLS*EQLGTS
Trigger: GCTTGTTCCAAGTTGTTCTCAACTTAGGAAGTAATT...TTCTAGCCTTGCCCGTTGCGCAGTATATACTGATCCAGATGATAAACCAGTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
3UTR-3UTR GCA 90 bp CTGAATGTAGCACAGTTCTTCACAACCGATGGGGGAATAATTCAACATGGTGTCTCAATCATGTTTGTTTaGACCAAATCCCAAGCCATT +
Preference number: 2 (lower is better)
Translates to: LNVAQFFTTDGGIIQHGVSIMFV*TKSQAI
Trigger: AATGGCTTGGGATTTGGTGCAAACAAACATGATTGA...GACACCATGTTGAATTATTCCCCCATCGGTTGTGAAGAACTGTGCTACATTCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
3UTR-3UTR GCA 90 bp GACTTGGCTACACCTAAAGGGGAACTTAGTACAAGACTTTTTCTTCACCAGAATAACGTTCTAACGACGTaGTTCATCTCAACTGGTTAC +
Preference number: 2 (lower is better)
Translates to: DLATPKGELSTRLFLHQNNVLTT*FISTGY
Trigger: GTAACCAGTTGAGATGAAGCACGTCGTTAGAACGTT...ATTCTGGTGAAGAAAAAGTCTTGTACTAAGTTCCCCTTTAGGTGTAGCCAAGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
3UTR-3UTR GCA 90 bp AATGGAAGTAATGTGTTGGAGGGCAACCCAAAAGGACAGTTGCGAAATTATGAAACAAGAATGGTATCCTaGCAGACAAAAGACAGGAAG +
Preference number: 2 (lower is better)
Translates to: NGSNVLEGNPKGQLRNYETRMVS*QTKDRK
Trigger: CTTCCTGTCTTTTGTCTGGCAGGATACCATTCTTGT...TTCATAATTTCGCAACTGTCCTTTTGGGTTGCCCTCCAACACATTACTTCCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
3UTR-3UTR GCA 90 bp CTGAATGTAGCACAGTTCTTCACAACCGATGGGGGAATAATTCAACATGGTGTCATCCATGAACCAAGCTaGAAAGATCTCAAGCTAAAT +
Preference number: 2 (lower is better)
Translates to: LNVAQFFTTDGGIIQHGVIHEPS*KDLKLN
Trigger: ATTTAGCTTGAGATCTTTGCAGCTTGGTTCATGGAT...GACACCATGTTGAATTATTCCCCCATCGGTTGTGAAGAACTGTGCTACATTCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
3UTR-3UTR GCA 90 bp GTTCACTGGTTTATCATCTGGATCAGTATATACTGCGCAACGGGCAAGGCTAGACTGAGAGATAATAGCTaGCCTTGGTGTAATAATAAA +
Preference number: 2 (lower is better)
Translates to: VHWFIIWISIYCATGKARLRDNS*PWCNNK
Trigger: TTTATTATTACACCAAGGGCAGCTATTATCTCTCAG...TCTAGCCTTGCCCGTTGCGCAGTATATACTGATCCAGATGATAAACCAGTGAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486652.5
3UTR-3UTR CCA 90 bp AATGGAAGTAATGTGTTGGAGGGCAACCCAAAAGGACAGTTGCGAAATTATGAAGCCCTCTTCTCTTTGTaGATTCTGGAGTCTATTCAT +
Preference number: 2 (lower is better)
Translates to: NGSNVLEGNPKGQLRNYEALFSL*ILESIH
Trigger: ATGAATAGACTCCAGAATCCACAAAGAGAAGAGGGC...TTCATAATTTCGCAACTGTCCTTTTGGGTTGCCCTCCAACACATTACTTCCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
3UTR-3UTR CCA 90 bp AATGGAAGTAATGTGTTGGAGGGCAACCCAAAAGGACAGTTGCGAAATTATGAATGTTACCATAGAGACTaGGGTGTATTAACGGCTTCA +
Preference number: 2 (lower is better)
Translates to: NGSNVLEGNPKGQLRNYECYHRD*GVLTAS
Trigger: TGAAGCCGTTAATACACCCCAGTCTCTATGGTAACA...TTCATAATTTCGCAACTGTCCTTTTGGGTTGCCCTCCAACACATTACTTCCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
3UTR-3UTR TCA 90 bp GAACCAAGCTGCAAAGATCTCAAGCTAAATAAGGCGGAAAGATTTGGAGAAACATACCCACTAAGAACATaGATGCGCTCTGTATTGTAT +
Preference number: 2 (lower is better)
Translates to: EPSCKDLKLNKAERFGETYPLRT*MRSVLY
Trigger: ATACAATACAGAGCGCATTCATGTTCTTAGTGGGTA...TGTTTCTCCAAATCTTTCCGCCTTATTTAGCTTGAGATCTTTGCAGCTTGGTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486652.5
3UTR-3UTR GCA 90 bp AAGGCTAGAATCCATGAACCAAGCTGCAAAGATCTCAAGCTAAATAAGGCGGAATCAATCATGTTTGTTTaGACCAAATCCCAAGCCATT +
Preference number: 2 (lower is better)
Translates to: KARIHEPSCKDLKLNKAESIMFV*TKSQAI
Trigger: AATGGCTTGGGATTTGGTGCAAACAAACATGATTGA...TTCCGCCTTATTTAGCTTGAGATCTTTGCAGCTTGGTTCATGGATTCTAGCCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
3UTR-3UTR GCA 90 bp AACAAGATAGTTGTCATCTGGACTCCATGCAATATAAGAAACGCCATAAGCATGACAAGAATGGTATCCTaGCAGACAAAAGACAGGAAG +
Preference number: 2 (lower is better)
Translates to: NKIVVIWTPCNIRNAISMTRMVS*QTKDRK
Trigger: CTTCCTGTCTTTTGTCTGGCAGGATACCATTCTTGT...CATGCTTATGGCGTTTCTTATATTGCATGGAGTCCAGATGACAACTATCTTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486652.5
3UTR-3UTR GCA 90 bp TTGTTAGTATCTTGTGGCTGGCTTCATAGTATAAGACTCACTCTTAAGCCTACTCTAAGTGGTGGTCTCTaGAAAATGGAGCTTGAAGAA +
Preference number: 2 (lower is better)
Translates to: LLVSCGWLHSIRLTLKPTLSGGL*KMELEE
Trigger: TTCTTCAAGCTCCATTTTGCAGAGACCACCACTTAG...AGTAGGCTTAAGAGTGAGTCTTATACTATGAAGCCAGCCACAAGATACTAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
3UTR-3UTR CCA 90 bp TATATTAAATCAGATATGGTTTCTGAAATGGAAGTAATGTGTTGGAGGGCAACCCAAGGTGTAAATGTTTaGCCCCAATCGGGCTTCAGA +
Preference number: 2 (lower is better)
Translates to: YIKSDMVSEMEVMCWRATQGVNV*PQSGFR
Trigger: TCTGAAGCCCGATTGGGGCCAAACATTTACACCTTG...GGTTGCCCTCCAACACATTACTTCCATTTCAGAAACCATATCTGATTTAATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
3UTR-3UTR CCA 90 bp GACTTGGCTACACCTAAAGGGGAACTTAGTACAAGACTTTTTCTTCACCAGAATCACTGGTTTATCATCTaGATCAGTATATACTGCGCA +
Preference number: 2 (lower is better)
Translates to: DLATPKGELSTRLFLHQNHWFII*ISIYCA
Trigger: TGCGCAGTATATACTGATCCAGATGATAAACCAGTG...ATTCTGGTGAAGAAAAAGTCTTGTACTAAGTTCCCCTTTAGGTGTAGCCAAGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
3UTR-3UTR CCA 90 bp TTACCCCTTCCCAGGAGTCAAGGAGATTACCATCTAAGTCACACTGATAGAACTTTTGACATAGTTCACTaGTTTATCATCTGGATCAGT +
Preference number: 2 (lower is better)
Translates to: LPLPRSQGDYHLSHTDRTFDIVH*FIIWIS
Trigger: ACTGATCCAGATGATAAACCAGTGAACTATGTCAAA...AGTTCTATCAGTGTGACTTAGATGGTAATCTCCTTGACTCCTGGGAAGGGGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486652.5
3UTR-3UTR CCA 90 bp TTGTTAGTATCTTGTGGCTGGCTTCATAGTATAAGACTCACTCTTAAGCCTACTAGCACAGTCACTGCATaGCAAATGTATGAAACAGAC +
Preference number: 2 (lower is better)
Translates to: LLVSCGWLHSIRLTLKPTSTVTA*QMYETD
Trigger: GTCTGTTTCATACATTTGCCATGCAGTGACTGTGCT...AGTAGGCTTAAGAGTGAGTCTTATACTATGAAGCCAGCCACAAGATACTAACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
3UTR-3UTR CCA 90 bp GAGACTTTCAGTAAAAATGACAAGATCCTAGAACAGCTGTTTCCAGGACTTTTTATGGAAGTAATGTGTTaGAGGGCAACCCAAAAGGAC +
Preference number: 2 (lower is better)
Translates to: ETFSKNDKILEQLFPGLFMEVMC*RATQKD
Trigger: GTCCTTTTGGGTTGCCCTCCAACACATTACTTCCAT...AAAAAGTCCTGGAAACAGCTGTTCTAGGATCTTGTCATTTTTACTGAAAGTCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000480676.2
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
3UTR-3UTR TCA 90 bp TTGTTAGTATCTTGTGGCTGGCTTCATAGTATAAGACTCACTCTTAAGCCTACTTTCAAGATCGGGTACTaGTGTTCCTTCAGGAATAAA +
Preference number: 2 (lower is better)
Translates to: LLVSCGWLHSIRLTLKPTFKIGY*CSFRNK
Trigger: TTTATTCCTGAAGGAACATCAGTACCCGATCTTGAA...AGTAGGCTTAAGAGTGAGTCTTATACTATGAAGCCAGCCACAAGATACTAACAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
3UTR-3UTR GCA 90 bp ACTAACCTGATTTTTGGAGCCCAAATTCTCCACTCTATTTTGATCTATGTGCAATCTGAGTGTTACAAATaGACCGTAGCACACTGTAAC +
Preference number: 2 (lower is better)
Translates to: TNLIFGAQILHSILIYVQSECYK*TVAHCN
Trigger: GTTACAGTGTGCTACGGTGCATTTGTAACACTCAGA...TTGCACATAGATCAAAATAGAGTGGAGAATTTGGGCTCCAAAAATCAGGTTAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
3UTR-3UTR CCA 90 bp AGCTGCAAAGATCTCAAGCTAAATAAGGCGGAAAGATTTGGAGAAACAAAAGAAGAAGAGCAACAAGAATaGTATCCTGCCAGACAAAAG +
Preference number: 2 (lower is better)
Translates to: SCKDLKLNKAERFGETKEEEQQE*YPARQK
Trigger: CTTTTGTCTGGCAGGATACCATTCTTGTTGCTCTTC...TTCTTTTGTTTCTCCAAATCTTTCCGCCTTATTTAGCTTGAGATCTTTGCAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
3UTR-3UTR CCA 90 bp TCCTATCCAATGTATACTCTTCAGACTAATGCACTCTTTCTATCAAGCCTTCTAGAAGAGCAACAAGAATaGTATCCTGCCAGACAAAAG +
Preference number: 2 (lower is better)
Translates to: SYPMYTLQTNALFLSSLLEEQQE*YPARQK
Trigger: CTTTTGTCTGGCAGGATACCATTCTTGTTGCTCTTC...TAGAAGGCTTGATAGAAAGAGTGCATTAGTCTGAAGAGTATACATTGGATAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
3UTR-3UTR CCA 90 bp AATGGAAGTAATGTGTTGGAGGGCAACCCAAAAGGACAGTTGCGAAATTATGAATTTACTATGGGCTTCTaGGAGAATGCATGCTATTTT +
Preference number: 2 (lower is better)
Translates to: NGSNVLEGNPKGQLRNYEFTMGF*ENACYF
Trigger: AAAATAGCATGCATTCTCCCAGAAGCCCATAGTAAA...TTCATAATTTCGCAACTGTCCTTTTGGGTTGCCCTCCAACACATTACTTCCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
3UTR-3UTR CCA 90 bp TTAAGACAGACCCGGAAAACAAACTCACCTAGCTGCTATAGAAACCTTTGCATAGTGGTCTCTGCAAAATaGAGCTTGAAGAAATCTTTT +
Preference number: 2 (lower is better)
Translates to: LRQTRKTNSPSCYRNLCIVVSAK*SLKKSF
Trigger: AAAAGATTTCTTCAAGCTCCATTTTGCAGAGACCAC...TATGCAAAGGTTTCTATAGCAGCTAGGTGAGTTTGTTTTCCGGGTCTGTCTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
3UTR-3UTR CCA 90 bp TTAAGACAGACCCGGAAAACAAACTCACCTAGCTGCTATAGAAACCTTTGCATAATTTGTAAACAGCTGTaGAGTTTCTATGCCCACATT +
Preference number: 2 (lower is better)
Translates to: LRQTRKTNSPSCYRNLCIICKQL*SFYAHI
Trigger: AATGTGGGCATAGAAACTCCACAGCTGTTTACAAAT...TATGCAAAGGTTTCTATAGCAGCTAGGTGAGTTTGTTTTCCGGGTCTGTCTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
3UTR-3UTR GCA 90 bp CCAAGCTGCAAAGATCTCAAGCTAAATAAGGCGGAAAGATTTGGAGAAACAAAATCAATCATGTTTGTTTaGACCAAATCCCAAGCCATT +
Preference number: 2 (lower is better)
Translates to: PSCKDLKLNKAERFGETKSIMFV*TKSQAI
Trigger: AATGGCTTGGGATTTGGTGCAAACAAACATGATTGA...TTTTGTTTCTCCAAATCTTTCCGCCTTATTTAGCTTGAGATCTTTGCAGCTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
3UTR-3UTR GCA 90 bp AAAATATATATACTGAGTTCAATGGGTAAGCCTGAATGTAGCACAGTTCTTCACAACGTTCTAACGACGTaGTTCATCTCAACTGGTTAC +
Preference number: 2 (lower is better)
Translates to: KIYILSSMGKPECSTVLHNVLTT*FISTGY
Trigger: GTAACCAGTTGAGATGAAGCACGTCGTTAGAACGTT...GTGAAGAACTGTGCTACATTCAGGCTTACCCATTGAACTCAGTATATATATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
3UTR-3UTR GCA 90 bp AATGGAAGTAATGTGTTGGAGGGCAACCCAAAAGGACAGTTGCGAAATTATGAATGCTATAGAAACCTTTaGATAGTTGTTACTCCGTTT +
Preference number: 2 (lower is better)
Translates to: NGSNVLEGNPKGQLRNYECYRNL*IVVTPF
Trigger: AAACGGAGTAACAACTATGCAAAGGTTTCTATAGCA...TTCATAATTTCGCAACTGTCCTTTTGGGTTGCCCTCCAACACATTACTTCCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
3UTR CAA 90 bp CTACCCCACAATGGAAGAATTTTTGACATCCAAGCCCTCTTCTCTTaGTGGATTCTGGAGTCTATTCATGATCATAATTATATTATAGAC +
Preference number: 2 (lower is better)
Translates to: LPHNGRIFDIQALFS*WILESIHDHNYIID
Trigger: GTCTATAATATAATTATGATCATGAATAGACTCCAGAATCCACAAAGAGAAGAGGGCTTGGATGTCAAAAATTCTTCCATTGTGGGGTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
3UTR-3UTR TCA 90 bp ACTAACCTGATTTTTGGAGCCCAAATTCTCCACTCTATTTTGATCTATGTGCAAAATTACTTCCTAAGTTaGGAACAACTTGGAACAAGC +
Preference number: 2 (lower is better)
Translates to: TNLIFGAQILHSILIYVQNYFLS*EQLGTS
Trigger: GCTTGTTCCAAGTTGTTCTCAACTTAGGAAGTAATT...TTGCACATAGATCAAAATAGAGTGGAGAATTTGGGCTCCAAAAATCAGGTTAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
3UTR-3UTR GCA 90 bp GAGACTTTCAGTAAAAATGACAAGATCCTAGAACAGCTGTTTCCAGGACTTTTTTCAATCATGTTTGTTTaGACCAAATCCCAAGCCATT +
Preference number: 2 (lower is better)
Translates to: ETFSKNDKILEQLFPGLFSIMFV*TKSQAI
Trigger: AATGGCTTGGGATTTGGTGCAAACAAACATGATTGA...AAAAAGTCCTGGAAACAGCTGTTCTAGGATCTTGTCATTTTTACTGAAAGTCTC
37% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
3UTR-3UTR CCA 90 bp TGTATCGCTGATTCCTACTCTTTTGCTAGATCACACCAAAATTACTTCCTAAGTTTTGACATAGTTCACTaGTTTATCATCTGGATCAGT +
Preference number: 2 (lower is better)
Translates to: CIADSYSFARSHQNYFLSFDIVH*FIIWIS
Trigger: ACTGATCCAGATGATAAACCAGTGAACTATGTCAAA...ACTTAGGAAGTAATTTTGGTGTGATCTAGCAAAAGAGTAGGAATCAGCGATACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
3UTR GCA 72 bp TGTGGGTTCCAGCTCACACAGTTTACTGTACGTGTGTaGCCTGTCAGCTCCGCAATTGGCAGTTCACTACGT +
Preference number: 3 (lower is better)
Translates to: CGFQLTQFTVRV*PVSSAIGSSLR
Trigger: ACGTAGTGAACTGCCAATTGCGGAGCTGACAGGGCACACACGTACAGTAAACTGTGTGAGCTGGAACCCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486652.5
3UTR CCA 72 bp CCCACGCTGACCTCCAGTCACAAAGCGCTTCCCATCTaGATTCCAAGCCACACTTGTCAAACTGTCTTCATG +
Preference number: 3 (lower is better)
Translates to: PTLTSSHKALPI*IPSHTCQTVFM
Trigger: CATGAAGACAGTTTGACAAGTGTGGCTTGGAATCCAGATGGGAAGCGCTTTGTGACTGGAGGTCAGCGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486652.5
3UTR TCA 72 bp TTGTATTTCAGCGGCGTCAATTCACAGCGTAGAACTTaGAGTGCCTCCAGGACCTTGCCATCCTCCAGGTAT +
Preference number: 3 (lower is better)
Translates to: LYFSGVNSQRRT*SASRTLPSSRY
Trigger: ATACCTGGAGGATGGCAAGGTCCTGGAGGCACTTCAAGTTCTACGCTGTGAATTGACGCCGCTGAAATACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486652.5
3UTR GCA 72 bp ATTCACAGCGTAGAACTTGAAGTGCCTCCAGGACCTTaGCATCCTCCAGGTATTCTAGGTACTTCTGCTGCA +
Preference number: 3 (lower is better)
Translates to: IHSVELEVPPGP*HPPGILGTSAA
Trigger: TGCAGCAGAAGTACCTAGAATACCTGGAGGATGGCAAGGTCCTGGAGGCACTTCAAGTTCTACGCTGTGAAT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486652.5
3UTR-3UTR CAA 90 bp TGTAGCACAGTTCTTCACAACCGATGGGGGAATAATTCAACATGGTGTCCAACAGCAAGGTGTAAATGTTaGGCCCCAATCGGGCTTCAG +
Preference number: 3 (lower is better)
Translates to: CSTVLHNRWGNNSTWCPTARCKC*APIGLQ
Trigger: CTGAAGCCCGATTGGGGCCAAACATTTACACCTTGC...TGTTGGACACCATGTTGAATTATTCCCCCATCGGTTGTGAAGAACTGTGCTACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
3UTR-3UTR CAA 90 bp TTACCCCTTCCCAGGAGTCAAGGAGATTACCATCTAAGTCACACTGATAGAACTCGGGAAGCTGTCCCTTaGCCTTCCCATTCTGCTTTT +
Preference number: 3 (lower is better)
Translates to: LPLPRSQGDYHLSHTDRTREAVP*PSHSAF
Trigger: AAAAGCAGAATGGGAAGGCAAAGGGACAGCTTCCCG...AGTTCTATCAGTGTGACTTAGATGGTAATCTCCTTGACTCCTGGGAAGGGGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486652.5
3UTR-3UTR CAA 90 bp TCAGATATGGTTTCTGAAATGGAAGTAATGTGTTGGAGGGCAACCCAAAAGGACGCAAGGTGTAAATGTTaGGCCCCAATCGGGCTTCAG +
Preference number: 3 (lower is better)
Translates to: SDMVSEMEVMCWRATQKDARCKC*APIGLQ
Trigger: CTGAAGCCCGATTGGGGCCAAACATTTACACCTTGC...GTCCTTTTGGGTTGCCCTCCAACACATTACTTCCATTTCAGAAACCATATCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
3UTR-3UTR CAA 90 bp TTCTTGTACTATGTTCCTATCTGTAAGGTCCTCGAAGTTATAGCCCCGAATTCGCAAGCACCAAAGGCATaGCACTCTTACCCCTTCCCA +
Preference number: 3 (lower is better)
Translates to: FLYYVPICKVLEVIAPNSQAPKA*HSYPFP
Trigger: TGGGAAGGGGTAAGAGTGCAATGCCTTTGGTGCTTG...CGAATTCGGGGCTATAACTTCGAGGACCTTACAGATAGGAACATAGTACAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486652.5
3UTR-3UTR CAA 90 bp GACTTGGCTACACCTAAAGGGGAACTTAGTACAAGACTTTTTCTTCACCAGAATGCAAGGTGTAAATGTTaGGCCCCAATCGGGCTTCAG +
Preference number: 3 (lower is better)
Translates to: DLATPKGELSTRLFLHQNARCKC*APIGLQ
Trigger: CTGAAGCCCGATTGGGGCCAAACATTTACACCTTGC...ATTCTGGTGAAGAAAAAGTCTTGTACTAAGTTCCCCTTTAGGTGTAGCCAAGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
3UTR-3UTR CAA 90 bp ATCTGGATCAGTATATACTGCGCAACGGGCAAGGCTAGAATCCATGAACCAAGCGGAGACTATGTTATGTaGTATTCAGCTGTTACGGAG +
Preference number: 3 (lower is better)
Translates to: IWISIYCATGKARIHEPSGDYVM*YSAVTE
Trigger: CTCCGTAACAGCTGAATACAACATAACATAGTCTCC...GCTTGGTTCATGGATTCTAGCCTTGCCCGTTGCGCAGTATATACTGATCCAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
3UTR-3UTR CAA 90 bp ATCAGTATATACTGCGCAACGGGCAAGGCTAGAATCCATGAACCAAGCTGCAAAGATTCCAAGCCACACTaGTCAAACTGTCTTCATGAG +
Preference number: 3 (lower is better)
Translates to: ISIYCATGKARIHEPSCKDSKPH*SNCLHE
Trigger: CTCATGAAGACAGTTTGACAAGTGTGGCTTGGAATC...TTTGCAGCTTGGTTCATGGATTCTAGCCTTGCCCGTTGCGCAGTATATACTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486652.5
3UTR GCA 72 bp TGCGCAACGGGCAAGGCTAGAATCCATGAACCAAGCTaGAAAGATCTCAAGCTAAATAAGGCGGAAAGATTT +
Preference number: 3 (lower is better)
Translates to: CATGKARIHEPS*KDLKLNKAERF
Trigger: AAATCTTTCCGCCTTATTTAGCTTGAGATCTTTGCAGCTTGGTTCATGGATTCTAGCCTTGCCCGTTGCGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
3UTR CCA 72 bp GGTAAGCCTGAATGTAGCACAGTTCTTCACAACCGATaGGGGAATAATTCAACATGGTGTCCAACAACGTTC +
Preference number: 3 (lower is better)
Translates to: GKPECSTVLHNR*GNNSTWCPTTF
Trigger: GAACGTTGTTGGACACCATGTTGAATTATTCCCCCATCGGTTGTGAAGAACTGTGCTACATTCAGGCTTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
3UTR CCA 72 bp TTGTACATTCCAAAGCCAAAGCTCAGAGCAGTCATCTaGGCCACAAGCAACAAGATAGTTGTCATCTGGACT +
Preference number: 3 (lower is better)
Translates to: LYIPKPKLRAVI*ATSNKIVVIWT
Trigger: AGTCCAGATGACAACTATCTTGTTGCTTGTGGCCCAGATGACTGCTCTGAGCTTTGGCTTTGGAATGTACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486652.5
3UTR TCA 72 bp TCTGGATTCCAAGCCACACTTGTCAAACTGTCTTCATaGGACTGGCTCATTTTTGTCCTTAGTTCTCCTGTC +
Preference number: 3 (lower is better)
Translates to: SGFQATLVKLSS*DWLIFVLSSPV
Trigger: GACAGGAGAACTAAGGACAAAAATGAGCCAGTCTCATGAAGACAGTTTGACAAGTGTGGCTTGGAATCCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486652.5
3UTR GCA 72 bp ATAGTTCACTGGTTTATCATCTGGATCAGTATATACTaGGCAACGGGCAAGGCTAGAATCCATGAACCAAGC +
Preference number: 3 (lower is better)
Translates to: IVHWFIIWISIY*ATGKARIHEPS
Trigger: GCTTGGTTCATGGATTCTAGCCTTGCCCGTTGCGCAGTATATACTGATCCAGATGATAAACCAGTGAACTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
3UTR CCA 72 bp GTCATCTGGGCCACAAGCAACAAGATAGTTGTCATCTaGACTCCATGCAATATAAGAAACGCCATAAGCATG +
Preference number: 3 (lower is better)
Translates to: VIWATSNKIVVI*TPCNIRNAISM
Trigger: CATGCTTATGGCGTTTCTTATATTGCATGGAGTCCAGATGACAACTATCTTGTTGCTTGTGGCCCAGATGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486652.5
3UTR-3UTR CAA 90 bp ACAACCGATGGGGGAATAATTCAACATGGTGTCCAACAACGTTCTAACGACGTGATCAATCATGTTTGTTaGCACCAAATCCCAAGCCAT +
Preference number: 3 (lower is better)
Translates to: TTDGGIIQHGVQQRSNDVINHVC*HQIPSH
Trigger: ATGGCTTGGGATTTGGTGCAAACAAACATGATTGAT...CACGTCGTTAGAACGTTGTTGGACACCATGTTGAATTATTCCCCCATCGGTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
3UTR-3UTR CAA 90 bp TCTCAACTGGTTACTATGAAGCAAGGTGTAAATGTTTGGCCCCAATCGGGCTTCATCAATCATGTTTGTTaGCACCAAATCCCAAGCCAT +
Preference number: 3 (lower is better)
Translates to: SQLVTMKQGVNVWPQSGFINHVC*HQIPSH
Trigger: ATGGCTTGGGATTTGGTGCAAACAAACATGATTGAT...GAAGCCCGATTGGGGCCAAACATTTACACCTTGCTTCATAGTAACCAGTTGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
3UTR-3UTR CAA 90 bp ATCAGTATATACTGCGCAACGGGCAAGGCTAGAATCCATGAACCAAGCTGCAAAAGCTATCAATCATGTTaGTTTGCACCAAATCCCAAG +
Preference number: 3 (lower is better)
Translates to: ISIYCATGKARIHEPSCKSYQSC*FAPNPK
Trigger: CTTGGGATTTGGTGCAAACAAACATGATTGATAGCT...TTTGCAGCTTGGTTCATGGATTCTAGCCTTGCCCGTTGCGCAGTATATACTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
3UTR GCA 72 bp TTGCCCCTGAATGGGCACAAATCTGAGTGTTACAAATaGACCGTAGCACACTGTAACCAAATTTGTAAACAG +
Preference number: 3 (lower is better)
Translates to: LPLNGHKSECYK*TVAHCNQICKQ
Trigger: CTGTTTACAAATTTGGTTACAGTGTGCTACGGTGCATTTGTAACACTCAGATTTGTGCCCATTCAGGGGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
3UTR GCA 72 bp GAAGTCGTCTGCTCCAAATTCACCATCAACTATCCATaGTACTGCATTCCTCTTCAATATTCTGGTGGTCTA +
Preference number: 3 (lower is better)
Translates to: EVVCSKFTINYP*YCIPLQYSGGL
Trigger: TAGACCACCAGAATATTGAAGAGGAATGCAGTAGCATGGATAGTTGATGGTGAATTTGGAGCAGACGACTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486652.5
3UTR-3UTR CAA 90 bp TTACCCCTTCCCAGGAGTCAAGGAGATTACCATCTAAGTCACACTGATAGAACTATCAATCATGTTTGTTaGCACCAAATCCCAAGCCAT +
Preference number: 3 (lower is better)
Translates to: LPLPRSQGDYHLSHTDRTINHVC*HQIPSH
Trigger: ATGGCTTGGGATTTGGTGCAAACAAACATGATTGAT...AGTTCTATCAGTGTGACTTAGATGGTAATCTCCTTGACTCCTGGGAAGGGGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486652.5
3UTR-3UTR CAA 90 bp TCTGAAATGGAAGTAATGTGTTGGAGGGCAACCCAAAAGGACAGTTGCGAAATTGGAGACTATGTTATGTaGTATTCAGCTGTTACGGAG +
Preference number: 3 (lower is better)
Translates to: SEMEVMCWRATQKDSCEIGDYVM*YSAVTE
Trigger: CTCCGTAACAGCTGAATACAACATAACATAGTCTCC...AATTTCGCAACTGTCCTTTTGGGTTGCCCTCCAACACATTACTTCCATTTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
3UTR-3UTR CAA 90 bp TTAAGACAGACCCGGAAAACAAACTCACCTAGCTGCTATAGAAACCTTTGCATACAAGCCCTCTTCTCTTaGTGGATTCTGGAGTCTATT +
Preference number: 3 (lower is better)
Translates to: LRQTRKTNSPSCYRNLCIQALFS*WILESI
Trigger: AATAGACTCCAGAATCCACAAAGAGAAGAGGGCTTG...TATGCAAAGGTTTCTATAGCAGCTAGGTGAGTTTGTTTTCCGGGTCTGTCTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
3UTR TCA 72 bp CGTATAACATGGGAACTGCCTCCTTTAAGTGTATCTTaGAACACGGTCTTCCTTGCTTCTTTTCCCAATCAA +
Preference number: 3 (lower is better)
Translates to: RITWELPPLSVS*NTVFLASFPNQ
Trigger: TTGATTGGGAAAAGAAGCAAGGAAGACCGTGTTTCAAGATACACTTAAAGGAGGCAGTTCCCATGTTATACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486652.5
3UTR-3UTR CAA 90 bp TTGTTAGTATCTTGTGGCTGGCTTCATAGTATAAGACTCACTCTTAAGCCTACTCACCAGAATCTTATTTaGGGGGTATCCCCATTCTCA +
Preference number: 3 (lower is better)
Translates to: LLVSCGWLHSIRLTLKPTHQNLI*GVSPFS
Trigger: TGAGAATGGGGATACCCCCAAAATAAGATTCTGGTG...AGTAGGCTTAAGAGTGAGTCTTATACTATGAAGCCAGCCACAAGATACTAACAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
3UTR-3UTR CAA 90 bp GACATAGTTCACTGGTTTATCATCTGGATCAGTATATACTGCGCAACGGGCAAGAATGAACTCCCTGAGTaGCTACATTTAACAAAGCTA +
Preference number: 3 (lower is better)
Translates to: DIVHWFIIWISIYCATGKNELPE*LHLTKL
Trigger: TAGCTTTGTTAAATGTAGCAACTCAGGGAGTTCATT...CTTGCCCGTTGCGCAGTATATACTGATCCAGATGATAAACCAGTGAACTATGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486652.5
3UTR-3UTR CAA 90 bp AACAAGATAGTTGTCATCTGGACTCCATGCAATATAAGAAACGCCATAAGCATGGAAACACGGTCTTCCTaGCTTCTTTTCCCAATCAAT +
Preference number: 3 (lower is better)
Translates to: NKIVVIWTPCNIRNAISMETRSS*LLFPIN
Trigger: ATTGATTGGGAAAAGAAGCAAGGAAGACCGTGTTTC...CATGCTTATGGCGTTTCTTATATTGCATGGAGTCCAGATGACAACTATCTTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486652.5
3UTR-3UTR CAA 90 bp GACTTGGCTACACCTAAAGGGGAACTTAGTACAAGACTTTTTCTTCACCAGAATATTACTCTGAATTTCTaGTGTAATGTCCTTCCAAGC +
Preference number: 3 (lower is better)
Translates to: DLATPKGELSTRLFLHQNITLNF*CNVLPS
Trigger: GCTTGGAAGGACATTACACAAGAAATTCAGAGTAAT...ATTCTGGTGAAGAAAAAGTCTTGTACTAAGTTCCCCTTTAGGTGTAGCCAAGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
3UTR GCA 72 bp ACGAGCATGTCTGTCCAGCTATCAATCATGTTTGTTTaGACCAAATCCCAAGCCATTAAAATACGACTAATT +
Preference number: 3 (lower is better)
Translates to: TSMSVQLSIMFV*TKSQAIKIRLI
Trigger: AATTAGTCGTATTTTAATGGCTTGGGATTTGGTGCAAACAAACATGATTGATAGCTGGACAGACATGCTCGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
3UTR CCA 72 bp AAATCAGATATGGTTTCTGAAATGGAAGTAATGTGTTaGAGGGCAACCCAAAAGGACAGTTGCGAAATTATG +
Preference number: 3 (lower is better)
Translates to: KSDMVSEMEVMC*RATQKDSCEIM
Trigger: CATAATTTCGCAACTGTCCTTTTGGGTTGCCCTCCAACACATTACTTCCATTTCAGAAACCATATCTGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000480676.2
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
3UTR-3UTR CAA 90 bp TCCTATCCAATGTATACTCTTCAGACTAATGCACTCTTTCTATCAAGCCTTCTAATCAATCATGTTTGTTaGCACCAAATCCCAAGCCAT +
Preference number: 3 (lower is better)
Translates to: SYPMYTLQTNALFLSSLLINHVC*HQIPSH
Trigger: ATGGCTTGGGATTTGGTGCAAACAAACATGATTGAT...TAGAAGGCTTGATAGAAAGAGTGCATTAGTCTGAAGAGTATACATTGGATAGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
3UTR TCA 72 bp AGAAATCTTTTACATACCAATTTGATAAGAGTCTGCTaGCCACGATCTGTCATTTTCTTTACTATGGGCTTC +
Preference number: 3 (lower is better)
Translates to: RNLLHTNLIRVC*PRSVIFFTMGF
Trigger: GAAGCCCATAGTAAAGAAAATGACAGATCGTGGTCAGCAGACTCTTATCAAATTGGTATGTAAAAGATTTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp TCATCTGGATCAGTATATACTGCGCAACGGGCAAGGCTAGAATCCATGAACCAACGAGAGAGGCCGTGGTaGGAAGCCGGTGGGGCGAGG +
Preference number: 4 (lower is better)
Translates to: SSGSVYTAQRARLESMNQRERPW*EAGGAR
Trigger: CCTCGCCCCACCGGCTTCCCACCACGGCCTCTCTCG...TTGGTTCATGGATTCTAGCCTTGCCCGTTGCGCAGTATATACTGATCCAGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414423.9
ENST00000678555.1
ENST00000678917.1
CDS-3UTR CCA 90 bp GACATAGTTCACTGGTTTATCATCTGGATCAGTATATACTGCGCAACGGGCAAGCGCCGAGAGAGGCCGTaGTGGGAAGCCGGTGGGGCG +
Preference number: 4 (lower is better)
Translates to: DIVHWFIIWISIYCATGKRRERP*WEAGGA
Trigger: CGCCCCACCGGCTTCCCACCACGGCCTCTCTCGGCG...CTTGCCCGTTGCGCAGTATATACTGATCCAGATGATAAACCAGTGAACTATGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414423.9
ENST00000678555.1
ENST00000678917.1
CDS-3UTR CCA 90 bp ATCAGTATATACTGCGCAACGGGCAAGGCTAGAATCCATGAACCAAGCTGCAAAAGGAGCCCATTGGCGTaGGCCAGGTCCCCCGCGGAC +
Preference number: 4 (lower is better)
Translates to: ISIYCATGKARIHEPSCKRSPLA*ARSPAD
Trigger: GTCCGCGGGGGACCTGGCCCACGCCAATGGGCTCCT...TTTGCAGCTTGGTTCATGGATTCTAGCCTTGCCCGTTGCGCAGTATATACTGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678917.1
CDS-3UTR CCA 90 bp ACAACCGATGGGGGAATAATTCAACATGGTGTCCAACAACGTTCTAACGACGTGAGGAGCCCATTGGCGTaGGCCAGGTCCCCCGCGGAC +
Preference number: 4 (lower is better)
Translates to: TTDGGIIQHGVQQRSNDVRSPLA*ARSPAD
Trigger: GTCCGCGGGGGACCTGGCCCACGCCAATGGGCTCCT...CACGTCGTTAGAACGTTGTTGGACACCATGTTGAATTATTCCCCCATCGGTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678917.1
CDS-3UTR GCA 90 bp TCATCTGGATCAGTATATACTGCGCAACGGGCAAGGCTAGAATCCATGAACCAAGGCAGCGGAGGCAGCTaGCGCCTCTGTCCTCGGATC +
Preference number: 4 (lower is better)
Translates to: SSGSVYTAQRARLESMNQGSGGS*RLCPRI
Trigger: GATCCGAGGACAGAGGCGGCAGCTGCCTCCGCTGCC...TTGGTTCATGGATTCTAGCCTTGCCCGTTGCGCAGTATATACTGATCCAGATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414423.9
ENST00000678555.1
ENST00000678917.1
CDS-3UTR GCA 90 bp TGTAGCACAGTTCTTCACAACCGATGGGGGAATAATTCAACATGGTGTCCAACAGGGAGAGGCCTGCTCTaGCTGCCGAAGCCCCGGGCT +
Preference number: 4 (lower is better)
Translates to: CSTVLHNRWGNNSTWCPTGRGLL*LPKPRA
Trigger: AGCCCGGGGCTTCGGCAGGCAGAGCAGGCCTCTCCC...TGTTGGACACCATGTTGAATTATTCCCCCATCGGTTGTGAAGAACTGTGCTACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414423.9
ENST00000678555.1
ENST00000678917.1
CDS-3UTR CCA 90 bp TTCACTGGTTTATCATCTGGATCAGTATATACTGCGCAACGGGCAAGGCTAGAACGAGAGAGGCCGTGGTaGGAAGCCGGTGGGGCGAGG +
Preference number: 4 (lower is better)
Translates to: FTGLSSGSVYTAQRARLERERPW*EAGGAR
Trigger: CCTCGCCCCACCGGCTTCCCACCACGGCCTCTCTCG...TTCTAGCCTTGCCCGTTGCGCAGTATATACTGATCCAGATGATAAACCAGTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414423.9
ENST00000678555.1
ENST00000678917.1
CDS-3UTR CCA 90 bp GTGGATCTATTCCCCTCGCCACACACACACATTTTCAAGGAGCCAATAACATTTTGGCCGCTACTTCGGTaGGGGACAGCAGCGGCGGCG +
Preference number: 4 (lower is better)
Translates to: VDLFPSPHTHIFKEPITFWPLLR*GTAAAA
Trigger: CGCCGCCGCTGCTGTCCCCCACCGAAGTAGCGGCCA...AAATGTTATTGGCTCCTTGAAAATGTGTGTGTGTGGCGAGGGGAATAGATCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000414423.9
ENST00000678917.1
CDS-3UTR CCA 90 bp GTTCACTGGTTTATCATCTGGATCAGTATATACTGCGCAACGGGCAAGGCTAGACCGCTGACCAGGCTGTaGCCGCTACTTCGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: VHWFIIWISIYCATGKARPLTRL*PLLRWG
Trigger: CCCCCACCGAAGTAGCGGCCACAGCCTGGTCAGCGG...TCTAGCCTTGCCCGTTGCGCAGTATATACTGATCCAGATGATAAACCAGTGAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414423.9
ENST00000678555.1
ENST00000678917.1
CDS-3UTR CCA 90 bp ACAGAAGTCGTCTGCTCCAAATTCACCATCAACTATCCATGCTACTGCATTCCTAGGCAGCTGCGACGGTaGCTGAGGATGCGGCGGCCG +
Preference number: 4 (lower is better)
Translates to: TEVVCSKFTINYPCYCIPRQLRR*LRMRRP
Trigger: CGGCCGCCGCATCCTCAGCCACCGTCGCAGCTGCCT...AGGAATGCAGTAGCATGGATAGTTGATGGTGAATTTGGAGCAGACGACTTCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486652.5
CDS-3UTR CCA 90 bp GTGTCCAACAACGTTCTAACGACGTGCTTCATCTCAACTGGTTACTATGAAGCAAGGCAGCTGCGACGGTaGCTGAGGATGCGGCGGCCG +
Preference number: 4 (lower is better)
Translates to: VSNNVLTTCFISTGYYEARQLRR*LRMRRP
Trigger: CGGCCGCCGCATCCTCAGCCACCGTCGCAGCTGCCT...TGCTTCATAGTAACCAGTTGAGATGAAGCACGTCGTTAGAACGTTGTTGGACAC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp ATGACGAGCATGTCTGTCCAGCTATCAATCATGTTTGTTTGCACCAAATCCCAAGAGGCCTGCTCTGCCTaGCGAAGCCCCGGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: MTSMSVQLSIMFVCTKSQEACSA*RSPGLS
Trigger: GGAGAGCCCGGGGCTTCGGCAGGCAGAGCAGGCCTC...TTGGGATTTGGTGCAAACAAACATGATTGATAGCTGGACAGACATGCTCGTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414423.9
ENST00000678555.1
ENST00000678917.1
CDS-3UTR GCA 90 bp TACACAGAAGAGCAACAAGAATGGTATCCTGCCAGACAAAAGACAGGAAGGAAAGGGAGAGGCCTGCTCTaGCTGCCGAAGCCCCGGGCT +
Preference number: 4 (lower is better)
Translates to: YTEEQQEWYPARQKTGRKGRGLL*LPKPRA
Trigger: AGCCCGGGGCTTCGGCAGGCAGAGCAGGCCTCTCCC...TTTCCTTCCTGTCTTTTGTCTGGCAGGATACCATTCTTGTTGCTCTTCTGTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414423.9
ENST00000678555.1
ENST00000678917.1
CDS-3UTR GCA 90 bp GTTCACTGGTTTATCATCTGGATCAGTATATACTGCGCAACGGGCAAGGCTAGAGGCTGTTGCTATTGTTaGTGGCGGCGGAGGGGGCGG +
Preference number: 4 (lower is better)
Translates to: VHWFIIWISIYCATGKARGCCYC*WRRRGR
Trigger: CCGCCCCCTCCGCCGCCAGCAACAATAGCAACAGCC...TCTAGCCTTGCCCGTTGCGCAGTATATACTGATCCAGATGATAAACCAGTGAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678917.1
CDS-3UTR CCA 90 bp GTGCACGAGACTTTCAGTAAAAATGACAAGATCCTAGAACAGCTGTTTCCAGGACGAGAGAGGCCGTGGTaGGAAGCCGGTGGGGCGAGG +
Preference number: 4 (lower is better)
Translates to: VHETFSKNDKILEQLFPGRERPW*EAGGAR
Trigger: CCTCGCCCCACCGGCTTCCCACCACGGCCTCTCTCG...TCCTGGAAACAGCTGTTCTAGGATCTTGTCATTTTTACTGAAAGTCTCGTGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414423.9
ENST00000678917.1
CDS-3UTR CCA 90 bp AGCACTGTTTCTGACCATGTCTCATGTGGTATTCCAGAAGAGCATCAGTTATACAGGAGCCCATTGGCGTaGGCCAGGTCCCCCGCGGAC +
Preference number: 4 (lower is better)
Translates to: STVSDHVSCGIPEEHQLYRSPLA*ARSPAD
Trigger: GTCCGCGGGGGACCTGGCCCACGCCAATGGGCTCCT...GTATAACTGATGCTCTTCTGGAATACCACATGAGACATGGTCAGAAACAGTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678917.1
CDS-3UTR TCA 90 bp GTAGAACTTGAAGTGCCTCCAGGACCTTGCCATCCTCCAGGTATTCTAGGTACTGCCGCTTCTTCTTCTTaGGGCTGCTGCCCAGTTCTG +
Preference number: 4 (lower is better)
Translates to: VELEVPPGPCHPPGILGTAASSS*GCCPVL
Trigger: CAGAACTGGGCAGCAGCCTCAAGAAGAAGAAGCGGC...AGTACCTAGAATACCTGGAGGATGGCAAGGTCCTGGAGGCACTTCAAGTTCTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486652.5
CDS-3UTR GCA 90 bp TACACAGAAGAGCAACAAGAATGGTATCCTGCCAGACAAAAGACAGGAAGGAAAGGCAGCGGAGGCAGCTaGCGCCTCTGTCCTCGGATC +
Preference number: 4 (lower is better)
Translates to: YTEEQQEWYPARQKTGRKGSGGS*RLCPRI
Trigger: GATCCGAGGACAGAGGCGGCAGCTGCCTCCGCTGCC...TTTCCTTCCTGTCTTTTGTCTGGCAGGATACCATTCTTGTTGCTCTTCTGTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414423.9
ENST00000678555.1
ENST00000678917.1
CDS-3UTR GCA 90 bp GTTTCTGACCATGTCTCATGTGGTATTCCAGAAGAGCATCAGTTATACTGTGTAGAGGCCTGCTCTGCCTaGCGAAGCCCCGGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: VSDHVSCGIPEEHQLYCVEACSA*RSPGLS
Trigger: GGAGAGCCCGGGGCTTCGGCAGGCAGAGCAGGCCTC...TACACAGTATAACTGATGCTCTTCTGGAATACCACATGAGACATGGTCAGAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414423.9
ENST00000678917.1
CDS-3UTR GCA 90 bp GAACCAAGCTGCAAAGATCTCAAGCTAAATAAGGCGGAAAGATTTGGAGAAACAGGGAGAGGCCTGCTCTaGCTGCCGAAGCCCCGGGCT +
Preference number: 4 (lower is better)
Translates to: EPSCKDLKLNKAERFGETGRGLL*LPKPRA
Trigger: AGCCCGGGGCTTCGGCAGGCAGAGCAGGCCTCTCCC...TGTTTCTCCAAATCTTTCCGCCTTATTTAGCTTGAGATCTTTGCAGCTTGGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414423.9
ENST00000678555.1
ENST00000678917.1
CDS-3UTR GCA 90 bp GTGTCCAACAACGTTCTAACGACGTGCTTCATCTCAACTGGTTACTATGAAGCAGGCTGTTGCTATTGTTaGTGGCGGCGGAGGGGGCGG +
Preference number: 4 (lower is better)
Translates to: VSNNVLTTCFISTGYYEAGCCYC*WRRRGR
Trigger: CCGCCCCCTCCGCCGCCAGCAACAATAGCAACAGCC...TGCTTCATAGTAACCAGTTGAGATGAAGCACGTCGTTAGAACGTTGTTGGACAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678917.1
CDS-3UTR GCA 90 bp GTTACTATGAAGCAAGGTGTAAATGTTTGGCCCCAATCGGGCTTCAGAAATGGTGGCTGTTGCTATTGTTaGTGGCGGCGGAGGGGGCGG +
Preference number: 4 (lower is better)
Translates to: VTMKQGVNVWPQSGFRNGGCCYC*WRRRGR
Trigger: CCGCCCCCTCCGCCGCCAGCAACAATAGCAACAGCC...ACCATTTCTGAAGCCCGATTGGGGCCAAACATTTACACCTTGCTTCATAGTAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678917.1
CDS-3UTR GCA 90 bp TTCACTGGTTTATCATCTGGATCAGTATATACTGCGCAACGGGCAAGGCTAGAAGGCTGTTGCTATTGTTaGTGGCGGCGGAGGGGGCGG +
Preference number: 4 (lower is better)
Translates to: FTGLSSGSVYTAQRARLEGCCYC*WRRRGR
Trigger: CCGCCCCCTCCGCCGCCAGCAACAATAGCAACAGCC...TTCTAGCCTTGCCCGTTGCGCAGTATATACTGATCCAGATGATAAACCAGTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678917.1
CDS-3UTR GCA 90 bp TCCACCGCCTGCCGCAGGAGAGTCTGTAAACGCCGTGGGGGAAGCATCACTGATACAAGAATGGTATCCTaGCAGACAAAAGACAGGAAG +
Preference number: 4 (lower is better)
Translates to: STACRRRVCKRRGGSITDTRMVS*QTKDRK
Trigger: CTTCCTGTCTTTTGTCTGGCAGGATACCATTCTTGT...ATCAGTGATGCTTCCCCCACGGCGTTTACAGACTCTCCTGCGGCAGGCGGTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486652.5
CDS-3UTR CCA 90 bp TTCCAAAGTGGTTGTATCGCTGATTCCTACTCTTTTGCTAGATCACACCAAAATCGCCGAGAGAGGCCGTaGTGGGAAGCCGGTGGGGCG +
Preference number: 4 (lower is better)
Translates to: FQSGCIADSYSFARSHQNRRERP*WEAGGA
Trigger: CGCCCCACCGGCTTCCCACCACGGCCTCTCTCGGCG...ATTTTGGTGTGATCTAGCAAAAGAGTAGGAATCAGCGATACAACCACTTTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000414423.9
ENST00000678917.1
CDS-3UTR CCA 90 bp GACTTGGCTACACCTAAAGGGGAACTTAGTACAAGACTTTTTCTTCACCAGAATAGGCAGCTGCGACGGTaGCTGAGGATGCGGCGGCCG +
Preference number: 4 (lower is better)
Translates to: DLATPKGELSTRLFLHQNRQLRR*LRMRRP
Trigger: CGGCCGCCGCATCCTCAGCCACCGTCGCAGCTGCCT...ATTCTGGTGAAGAAAAAGTCTTGTACTAAGTTCCCCTTTAGGTGTAGCCAAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp TTTTTCATGACGAGCATGTCTGTCCAGCTATCAATCATGTTTGTTTGCACCAAATGGCCGCTACTTCGGTaGGGGACAGCAGCGGCGGCG +
Preference number: 4 (lower is better)
Translates to: FFMTSMSVQLSIMFVCTKWPLLR*GTAAAA
Trigger: CGCCGCCGCTGCTGTCCCCCACCGAAGTAGCGGCCA...TTTGGTGCAAACAAACATGATTGATAGCTGGACAGACATGCTCGTCATGAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414423.9
ENST00000678555.1
ENST00000678917.1
CDS-3UTR CCA 90 bp GTTACTATGAAGCAAGGTGTAAATGTTTGGCCCCAATCGGGCTTCAGAAATGGTGACGACTCCCCGTTCTaGGCCGACAAGCAGGCGAGT +
Preference number: 4 (lower is better)
Translates to: VTMKQGVNVWPQSGFRNGDDSPF*ADKQAS
Trigger: ACTCGCCTGCTTGTCGGCCCAGAACGGGGAGTCGTC...ACCATTTCTGAAGCCCGATTGGGGCCAAACATTTACACCTTGCTTCATAGTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000678555.1
ENST00000678917.1
CDS-3UTR CCA 90 bp TCATCTGGATCAGTATATACTGCGCAACGGGCAAGGCTAGAATCCATGAACCAATGTTGCTATTGTTGCTaGCGGCGGAGGGGGCGGAAG +
Preference number: 4 (lower is better)
Translates to: SSGSVYTAQRARLESMNQCCYCC*RRRGRK
Trigger: CTTCCGCCCCCTCCGCCGCCAGCAACAATAGCAACA...TTGGTTCATGGATTCTAGCCTTGCCCGTTGCGCAGTATATACTGATCCAGATGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678917.1
CDS-3UTR TCA 90 bp ACAACCGATGGGGGAATAATTCAACATGGTGTCCAACAACGTTCTAACGACGTGGCCGCTTCTTCTTCTTaGGGCTGCTGCCCAGTTCTG +
Preference number: 4 (lower is better)
Translates to: TTDGGIIQHGVQQRSNDVAASSS*GCCPVL
Trigger: CAGAACTGGGCAGCAGCCTCAAGAAGAAGAAGCGGC...CACGTCGTTAGAACGTTGTTGGACACCATGTTGAATTATTCCCCCATCGGTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp ATCAGTATATACTGCGCAACGGGCAAGGCTAGAATCCATGAACCAAGCTGCAAAGCCGCTTCTTCTTCTTaGGGCTGCTGCCCAGTTCTG +
Preference number: 4 (lower is better)
Translates to: ISIYCATGKARIHEPSCKAASSS*GCCPVL
Trigger: CAGAACTGGGCAGCAGCCTCAAGAAGAAGAAGCGGC...TTTGCAGCTTGGTTCATGGATTCTAGCCTTGCCCGTTGCGCAGTATATACTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp CTTTCCATCACTCAAGCACCAAAGGCATTGCACTCTTACCCCTTCCCAGGAGTCAATGACATCCTCATCTaGCTGGGAGAGCCGCTTCTT +
Preference number: 4 (lower is better)
Translates to: LSITQAPKALHSYPFPGVNDILI*LGEPLL
Trigger: AAGAAGCGGCTCTCCCAGTCAGATGAGGATGTCATT...GACTCCTGGGAAGGGGTAAGAGTGCAATGCCTTTGGTGCTTGAGTGATGGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486652.5
CDS-3UTR GCA 90 bp GAACCAAGCTGCAAAGATCTCAAGCTAAATAAGGCGGAAAGATTTGGAGAAACAGGCTGTTGCTATTGTTaGTGGCGGCGGAGGGGGCGG +
Preference number: 4 (lower is better)
Translates to: EPSCKDLKLNKAERFGETGCCYC*WRRRGR
Trigger: CCGCCCCCTCCGCCGCCAGCAACAATAGCAACAGCC...TGTTTCTCCAAATCTTTCCGCCTTATTTAGCTTGAGATCTTTGCAGCTTGGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678917.1
CDS-3UTR GCA 90 bp TCCACCGCCTGCCGCAGGAGAGTCTGTAAACGCCGTGGGGGAAGCATCACTGATGTATCCGGATCAACTTaGCATATGATAACTGTTGTA +
Preference number: 4 (lower is better)
Translates to: STACRRRVCKRRGGSITDVSGST*HMITVV
Trigger: TACAACAGTTATCATATGGCAAGTTGATCCGGATAC...ATCAGTGATGCTTCCCCCACGGCGTTTACAGACTCTCCTGCGGCAGGCGGTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486652.5
CDS-3UTR CCA 90 bp TGTATCGCTGATTCCTACTCTTTTGCTAGATCACACCAAAATTACTTCCTAAGTTGGCCGCTACTTCGGTaGGGGACAGCAGCGGCGGCG +
Preference number: 4 (lower is better)
Translates to: CIADSYSFARSHQNYFLSWPLLR*GTAAAA
Trigger: CGCCGCCGCTGCTGTCCCCCACCGAAGTAGCGGCCA...ACTTAGGAAGTAATTTTGGTGTGATCTAGCAAAAGAGTAGGAATCAGCGATACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000414423.9
ENST00000678917.1
CDS-3UTR CCA 90 bp TTCCAAAGTGGTTGTATCGCTGATTCCTACTCTTTTGCTAGATCACACCAAAATCCGCTGACCAGGCTGTaGCCGCTACTTCGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: FQSGCIADSYSFARSHQNPLTRL*PLLRWG
Trigger: CCCCCACCGAAGTAGCGGCCACAGCCTGGTCAGCGG...ATTTTGGTGTGATCTAGCAAAAGAGTAGGAATCAGCGATACAACCACTTTGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414423.9
ENST00000678917.1
CDS-3UTR CCA 90 bp AGCTGCAAAGATCTCAAGCTAAATAAGGCGGAAAGATTTGGAGAAACAAAAGAAAGGAGCCCATTGGCGTaGGCCAGGTCCCCCGCGGAC +
Preference number: 4 (lower is better)
Translates to: SCKDLKLNKAERFGETKERSPLA*ARSPAD
Trigger: GTCCGCGGGGGACCTGGCCCACGCCAATGGGCTCCT...TTCTTTTGTTTCTCCAAATCTTTCCGCCTTATTTAGCTTGAGATCTTTGCAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678917.1
CDS-3UTR CCA 90 bp ACTAACCTGATTTTTGGAGCCCAAATTCTCCACTCTATTTTGATCTATGTGCAAAGGCAGCTGCGACGGTaGCTGAGGATGCGGCGGCCG +
Preference number: 4 (lower is better)
Translates to: TNLIFGAQILHSILIYVQRQLRR*LRMRRP
Trigger: CGGCCGCCGCATCCTCAGCCACCGTCGCAGCTGCCT...TTGCACATAGATCAAAATAGAGTGGAGAATTTGGGCTCCAAAAATCAGGTTAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp AGCTGCAAAGATCTCAAGCTAAATAAGGCGGAAAGATTTGGAGAAACAAAAGAAAGGCAGCTGCGACGGTaGCTGAGGATGCGGCGGCCG +
Preference number: 4 (lower is better)
Translates to: SCKDLKLNKAERFGETKERQLRR*LRMRRP
Trigger: CGGCCGCCGCATCCTCAGCCACCGTCGCAGCTGCCT...TTCTTTTGTTTCTCCAAATCTTTCCGCCTTATTTAGCTTGAGATCTTTGCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp GTTACTATGAAGCAAGGTGTAAATGTTTGGCCCCAATCGGGCTTCAGAAATGGTGCTGCTGCCCAGTTCTaGGGTGGCCAAGGAAGAGGA +
Preference number: 4 (lower is better)
Translates to: VTMKQGVNVWPQSGFRNGAAAQF*GGQGRG
Trigger: TCCTCTTCCTTGGCCACCCCAGAACTGGGCAGCAGC...ACCATTTCTGAAGCCCGATTGGGGCCAAACATTTACACCTTGCTTCATAGTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp TACTGCGCAACGGGCAAGGCTAGAATCCATGAACCAAGCTGCAAAGATCTCAAGGCTGGCCATCATGGATaGAATCTGTGGGTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: YCATGKARIHEPSCKDLKAGHHG*NLWVPA
Trigger: AGCTGGAACCCACAGATTCCATCCATGATGGCCAGC...CTTGAGATCTTTGCAGCTTGGTTCATGGATTCTAGCCTTGCCCGTTGCGCAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp ATCTGGATCAGTATATACTGCGCAACGGGCAAGGCTAGAATCCATGAACCAAGCTCACAGCGTAGAACTTaGAGTGCCTCCAGGACCTTG +
Preference number: 4 (lower is better)
Translates to: IWISIYCATGKARIHEPSSQRRT*SASRTL
Trigger: CAAGGTCCTGGAGGCACTTCAAGTTCTACGCTGTGA...GCTTGGTTCATGGATTCTAGCCTTGCCCGTTGCGCAGTATATACTGATCCAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp AGCTGCAAAGATCTCAAGCTAAATAAGGCGGAAAGATTTGGAGAAACAAAAGAAGGCAGCGGAGGCAGCTaGCGCCTCTGTCCTCGGATC +
Preference number: 4 (lower is better)
Translates to: SCKDLKLNKAERFGETKEGSGGS*RLCPRI
Trigger: GATCCGAGGACAGAGGCGGCAGCTGCCTCCGCTGCC...TTCTTTTGTTTCTCCAAATCTTTCCGCCTTATTTAGCTTGAGATCTTTGCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414423.9
ENST00000678555.1
ENST00000678917.1
CDS-3UTR GCA 90 bp GTGTCCAACAACGTTCTAACGACGTGCTTCATCTCAACTGGTTACTATGAAGCATCCTCCTCCTCCTCCTaGCCCATTGGCCTGCATGAT +
Preference number: 4 (lower is better)
Translates to: VSNNVLTTCFISTGYYEASSSSS*PIGLHD
Trigger: ATCATGCAGGCCAATGGGGCAGGAGGAGGAGGAGGA...TGCTTCATAGTAACCAGTTGAGATGAAGCACGTCGTTAGAACGTTGTTGGACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414423.9
ENST00000678555.1
ENST00000678917.1
CDS-3UTR GCA 90 bp TACTGCGCAACGGGCAAGGCTAGAATCCATGAACCAAGCTGCAAAGATCTCAAGAAGCACCAAAGGCATTaGACTCTTACCCCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: YCATGKARIHEPSCKDLKKHQRH*TLTPSQ
Trigger: CTGGGAAGGGGTAAGAGTGCAATGCCTTTGGTGCTT...CTTGAGATCTTTGCAGCTTGGTTCATGGATTCTAGCCTTGCCCGTTGCGCAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp CTTTCCATCACTCAAGCACCAAAGGCATTGCACTCTTACCCCTTCCCAGGAGTCTGGATCAGTATATACTaGGCAACGGGCAAGGCTAGA +
Preference number: 4 (lower is better)
Translates to: LSITQAPKALHSYPFPGVWISIY*ATGKAR
Trigger: TCTAGCCTTGCCCGTTGCGCAGTATATACTGATCCA...GACTCCTGGGAAGGGGTAAGAGTGCAATGCCTTTGGTGCTTGAGTGATGGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486652.5
CDS-3UTR CCA 90 bp TCCTATCCAATGTATACTCTTCAGACTAATGCACTCTTTCTATCAAGCCTTCTACCGCTGACCAGGCTGTaGCCGCTACTTCGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: SYPMYTLQTNALFLSSLLPLTRL*PLLRWG
Trigger: CCCCCACCGAAGTAGCGGCCACAGCCTGGTCAGCGG...TAGAAGGCTTGATAGAAAGAGTGCATTAGTCTGAAGAGTATACATTGGATAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414423.9
ENST00000678555.1
ENST00000678917.1
CDS-3UTR CCA 90 bp TTTCATGACGAGCATGTCTGTCCAGCTATCAATCATGTTTGTTTGCACCAAATCGACGACTCCCCGTTCTaGGCCGACAAGCAGGCGAGT +
Preference number: 4 (lower is better)
Translates to: FHDEHVCPAINHVCLHQIDDSPF*ADKQAS
Trigger: ACTCGCCTGCTTGTCGGCCCAGAACGGGGAGTCGTC...GATTTGGTGCAAACAAACATGATTGATAGCTGGACAGACATGCTCGTCATGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000678555.1
ENST00000678917.1
CDS-3UTR CCA 90 bp AAAATATATATACTGAGTTCAATGGGTAAGCCTGAATGTAGCACAGTTCTTCACAGGAGCCCATTGGCGTaGGCCAGGTCCCCCGCGGAC +
Preference number: 4 (lower is better)
Translates to: KIYILSSMGKPECSTVLHRSPLA*ARSPAD
Trigger: GTCCGCGGGGGACCTGGCCCACGCCAATGGGCTCCT...GTGAAGAACTGTGCTACATTCAGGCTTACCCATTGAACTCAGTATATATATTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678917.1
CDS-3UTR CCA 90 bp AAGGCTAGAATCCATGAACCAAGCTGCAAAGATCTCAAGCTAAATAAGGCGGAAGCTGCTGCCCAGTTCTaGGGTGGCCAAGGAAGAGGA +
Preference number: 4 (lower is better)
Translates to: KARIHEPSCKDLKLNKAEAAAQF*GGQGRG
Trigger: TCCTCTTCCTTGGCCACCCCAGAACTGGGCAGCAGC...TTCCGCCTTATTTAGCTTGAGATCTTTGCAGCTTGGTTCATGGATTCTAGCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp TACTGCGCAACGGGCAAGGCTAGAATCCATGAACCAAGCTGCAAAGATCTCAAGACATCCTCATCTGACTaGGAGAGCCGCTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: YCATGKARIHEPSCKDLKTSSSD*ESRFFF
Trigger: GAAGAAGAAGCGGCTCTCCCAGTCAGATGAGGATGT...CTTGAGATCTTTGCAGCTTGGTTCATGGATTCTAGCCTTGCCCGTTGCGCAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp TACACAGAAGAGCAACAAGAATGGTATCCTGCCAGACAAAAGACAGGAAGGAAATGCTCCCTGGTGTGTTaGTTCTTCCCCCAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: YTEEQQEWYPARQKTGRKCSLVC*FFPQLL
Trigger: CAGCAGCTGGGGGAAGAATCAACACACCAGGGAGCA...TTTCCTTCCTGTCTTTTGTCTGGCAGGATACCATTCTTGTTGCTCTTCTGTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414423.9
ENST00000678555.1
ENST00000678917.1
CDS-3UTR TCA 90 bp ATGACGAGCATGTCTGTCCAGCTATCAATCATGTTTGTTTGCACCAAATCCCAATGCTCCCTGGTGTGTTaGTTCTTCCCCCAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: MTSMSVQLSIMFVCTKSQCSLVC*FFPQLL
Trigger: CAGCAGCTGGGGGAAGAATCAACACACCAGGGAGCA...TTGGGATTTGGTGCAAACAAACATGATTGATAGCTGGACAGACATGCTCGTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414423.9
ENST00000678555.1
ENST00000678917.1
CDS-3UTR TCA 90 bp CCTTCCCATTCTGCTTTTGCACGTAGGTCTTCTGCATGGCTACACATCAGATACCTTCATCCTCTGACATaGCAGAAAGCAGCAGTCAGG +
Preference number: 4 (lower is better)
Translates to: PSHSAFARRSSAWLHIRYLHPLT*QKAAVR
Trigger: CCTGACTGCTGCTTTCTGTCATGTCAGAGGATGAAG...GTATCTGATGTGTAGCCATGCAGAAGACCTACGTGCAAAAGCAGAATGGGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486652.5
CDS-3UTR GCA 90 bp GTGCACGAGACTTTCAGTAAAAATGACAAGATCCTAGAACAGCTGTTTCCAGGATCCTCCTCCTCCTCCTaGCCCATTGGCCTGCATGAT +
Preference number: 4 (lower is better)
Translates to: VHETFSKNDKILEQLFPGSSSSS*PIGLHD
Trigger: ATCATGCAGGCCAATGGGGCAGGAGGAGGAGGAGGA...TCCTGGAAACAGCTGTTCTAGGATCTTGTCATTTTTACTGAAAGTCTCGTGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414423.9
ENST00000678917.1
CDS-3UTR GCA 90 bp ACAACCGATGGGGGAATAATTCAACATGGTGTCCAACAACGTTCTAACGACGTGGTGCCTCCAGGACCTTaGCATCCTCCAGGTATTCTA +
Preference number: 4 (lower is better)
Translates to: TTDGGIIQHGVQQRSNDVVPPGP*HPPGIL
Trigger: TAGAATACCTGGAGGATGGCAAGGTCCTGGAGGCAC...CACGTCGTTAGAACGTTGTTGGACACCATGTTGAATTATTCCCCCATCGGTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp ATCAGTATATACTGCGCAACGGGCAAGGCTAGAATCCATGAACCAAGCTGCAAAGTGCCTCCAGGACCTTaGCATCCTCCAGGTATTCTA +
Preference number: 4 (lower is better)
Translates to: ISIYCATGKARIHEPSCKVPPGP*HPPGIL
Trigger: TAGAATACCTGGAGGATGGCAAGGTCCTGGAGGCAC...TTTGCAGCTTGGTTCATGGATTCTAGCCTTGCCCGTTGCGCAGTATATACTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp TCTCAACTGGTTACTATGAAGCAAGGTGTAAATGTTTGGCCCCAATCGGGCTTCGTGCCTCCAGGACCTTaGCATCCTCCAGGTATTCTA +
Preference number: 4 (lower is better)
Translates to: SQLVTMKQGVNVWPQSGFVPPGP*HPPGIL
Trigger: TAGAATACCTGGAGGATGGCAAGGTCCTGGAGGCAC...GAAGCCCGATTGGGGCCAAACATTTACACCTTGCTTCATAGTAACCAGTTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp TTTTTCATGACGAGCATGTCTGTCCAGCTATCAATCATGTTTGTTTGCACCAAAGACGACTCCCCGTTCTaGGCCGACAAGCAGGCGAGT +
Preference number: 4 (lower is better)
Translates to: FFMTSMSVQLSIMFVCTKDDSPF*ADKQAS
Trigger: ACTCGCCTGCTTGTCGGCCCAGAACGGGGAGTCGTC...TTTGGTGCAAACAAACATGATTGATAGCTGGACAGACATGCTCGTCATGAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000678555.1
ENST00000678917.1
CDS-3UTR CCA 90 bp TTGTTAGTATCTTGTGGCTGGCTTCATAGTATAAGACTCACTCTTAAGCCTACTGACGACTCCCCGTTCTaGGCCGACAAGCAGGCGAGT +
Preference number: 4 (lower is better)
Translates to: LLVSCGWLHSIRLTLKPTDDSPF*ADKQAS
Trigger: ACTCGCCTGCTTGTCGGCCCAGAACGGGGAGTCGTC...AGTAGGCTTAAGAGTGAGTCTTATACTATGAAGCCAGCCACAAGATACTAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414423.9
ENST00000678917.1
CDS-3UTR CCA 90 bp ATTCACCATCAACTATCCATGCTACTGCATTCCTCTTCAATATTCTGGTGGTCTTGTTGCTATTGTTGCTaGCGGCGGAGGGGGCGGAAG +
Preference number: 4 (lower is better)
Translates to: IHHQLSMLLHSSSIFWWSCCYCC*RRRGRK
Trigger: CTTCCGCCCCCTCCGCCGCCAGCAACAATAGCAACA...AGACCACCAGAATATTGAAGAGGAATGCAGTAGCATGGATAGTTGATGGTGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486652.5
CDS-3UTR CCA 90 bp GTTTCTGACCATGTCTCATGTGGTATTCCAGAAGAGCATCAGTTATACTGTGTATGTTGCTATTGTTGCTaGCGGCGGAGGGGGCGGAAG +
Preference number: 4 (lower is better)
Translates to: VSDHVSCGIPEEHQLYCVCCYCC*RRRGRK
Trigger: CTTCCGCCCCCTCCGCCGCCAGCAACAATAGCAACA...TACACAGTATAACTGATGCTCTTCTGGAATACCACATGAGACATGGTCAGAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678917.1
CDS-3UTR CCA 90 bp GACATAGTTCACTGGTTTATCATCTGGATCAGTATATACTGCGCAACGGGCAAGAGGCGCTGGCCATCATaGATGGAATCTGTGGGTTCC +
Preference number: 4 (lower is better)
Translates to: DIVHWFIIWISIYCATGKRRWPS*MESVGS
Trigger: GGAACCCACAGATTCCATCCATGATGGCCAGCGCCT...CTTGCCCGTTGCGCAGTATATACTGATCCAGATGATAAACCAGTGAACTATGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp TACTGCGCAACGGGCAAGGCTAGAATCCATGAACCAAGCTGCAAAGATCTCAAGCAAGGTGTAAATGTTTaGCCCCAATCGGGCTTCAGA +
Preference number: 4 (lower is better)
Translates to: YCATGKARIHEPSCKDLKQGVNV*PQSGFR
Trigger: TCTGAAGCCCGATTGGGGCCAAACATTTACACCTTG...CTTGAGATCTTTGCAGCTTGGTTCATGGATTCTAGCCTTGCCCGTTGCGCAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
3UTR CAA 72 bp AGTTTACTGTACGTGTGTGCCCTGTCAGCTCCGCAATaGGCAGTTCACTACGTTTGTGCCAGATGTAAACCT +
Preference number: 4 (lower is better)
Translates to: SLLYVCALSAPQ*AVHYVCARCKP
Trigger: AGGTTTACATCTGGCACAAACGTAGTGAACTGCCAATTGCGGAGCTGACAGGGCACACACGTACAGTAAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486652.5
CDS-3UTR TCA 90 bp GTTCACTGGTTTATCATCTGGATCAGTATATACTGCGCAACGGGCAAGGCTAGACGGGAACCCCGTTATTaGCATTCAGGCTGTTGCTAT +
Preference number: 4 (lower is better)
Translates to: VHWFIIWISIYCATGKARREPRY*HSGCCY
Trigger: ATAGCAACAGCCTGAATGTCAATAACGGGGTTCCCG...TCTAGCCTTGCCCGTTGCGCAGTATATACTGATCCAGATGATAAACCAGTGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678917.1
CDS-3UTR TCA 90 bp TCAACTGGTTACTATGAAGCAAGGTGTAAATGTTTGGCCCCAATCGGGCTTCAGAATGACATCCTCATCTaGCTGGGAGAGCCGCTTCTT +
Preference number: 4 (lower is better)
Translates to: STGYYEARCKCLAPIGLQNDILI*LGEPLL
Trigger: AAGAAGCGGCTCTCCCAGTCAGATGAGGATGTCATT...CTGAAGCCCGATTGGGGCCAAACATTTACACCTTGCTTCATAGTAACCAGTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp TCTCAACTGGTTACTATGAAGCAAGGTGTAAATGTTTGGCCCCAATCGGGCTTCAATGACATCCTCATCTaGCTGGGAGAGCCGCTTCTT +
Preference number: 4 (lower is better)
Translates to: SQLVTMKQGVNVWPQSGFNDILI*LGEPLL
Trigger: AAGAAGCGGCTCTCCCAGTCAGATGAGGATGTCATT...GAAGCCCGATTGGGGCCAAACATTTACACCTTGCTTCATAGTAACCAGTTGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp GACATAGTTCACTGGTTTATCATCTGGATCAGTATATACTGCGCAACGGGCAAGTCACAGCGTAGAACTTaGAGTGCCTCCAGGACCTTG +
Preference number: 4 (lower is better)
Translates to: DIVHWFIIWISIYCATGKSQRRT*SASRTL
Trigger: CAAGGTCCTGGAGGCACTTCAAGTTCTACGCTGTGA...CTTGCCCGTTGCGCAGTATATACTGATCCAGATGATAAACCAGTGAACTATGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp TCAACTGGTTACTATGAAGCAAGGTGTAAATGTTTGGCCCCAATCGGGCTTCAGTCGCTGGTGTGTATCTaGTGCCAGAACAGTCTTTCC +
Preference number: 4 (lower is better)
Translates to: STGYYEARCKCLAPIGLQSLVCI*CQNSLS
Trigger: GGAAAGACTGTTCTGGCATCAGATACACACCAGCGA...CTGAAGCCCGATTGGGGCCAAACATTTACACCTTGCTTCATAGTAACCAGTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp CTTTCCATCACTCAAGCACCAAAGGCATTGCACTCTTACCCCTTCCCAGGAGTCCCTAAGCCATTCAAGTaGTGTCCTATTAGCCTAATG +
Preference number: 4 (lower is better)
Translates to: LSITQAPKALHSYPFPGVPKPFK*CPISLM
Trigger: CATTAGGCTAATAGGACAGCACTTGAATGGCTTAGG...GACTCCTGGGAAGGGGTAAGAGTGCAATGCCTTTGGTGCTTGAGTGATGGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486652.5
CDS-3UTR GCA 90 bp GTTACTATGAAGCAAGGTGTAAATGTTTGGCCCCAATCGGGCTTCAGAAATGGTGTGCCTCCAGGACCTTaGCATCCTCCAGGTATTCTA +
Preference number: 4 (lower is better)
Translates to: VTMKQGVNVWPQSGFRNGVPPGP*HPPGIL
Trigger: TAGAATACCTGGAGGATGGCAAGGTCCTGGAGGCAC...ACCATTTCTGAAGCCCGATTGGGGCCAAACATTTACACCTTGCTTCATAGTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp ACAACCGATGGGGGAATAATTCAACATGGTGTCCAACAACGTTCTAACGACGTGGGGAAGCTGTCCCTTTaGCTTCCCATTCTGCTTTTG +
Preference number: 4 (lower is better)
Translates to: TTDGGIIQHGVQQRSNDVGKLSL*LPILLL
Trigger: CAAAAGCAGAATGGGAAGGCAAAGGGACAGCTTCCC...CACGTCGTTAGAACGTTGTTGGACACCATGTTGAATTATTCCCCCATCGGTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp GTTACTATGAAGCAAGGTGTAAATGTTTGGCCCCAATCGGGCTTCAGAAATGGTTGTAGTTCCACCGCCTaGCGCAGGAGAGTCTGTAAA +
Preference number: 4 (lower is better)
Translates to: VTMKQGVNVWPQSGFRNGCSSTA*RRRVCK
Trigger: TTTACAGACTCTCCTGCGGCAGGCGGTGGAACTACA...ACCATTTCTGAAGCCCGATTGGGGCCAAACATTTACACCTTGCTTCATAGTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp GTGTCCAACAACGTTCTAACGACGTGCTTCATCTCAACTGGTTACTATGAAGCATGTAGTTCCACCGCCTaGCGCAGGAGAGTCTGTAAA +
Preference number: 4 (lower is better)
Translates to: VSNNVLTTCFISTGYYEACSSTA*RRRVCK
Trigger: TTTACAGACTCTCCTGCGGCAGGCGGTGGAACTACA...TGCTTCATAGTAACCAGTTGAGATGAAGCACGTCGTTAGAACGTTGTTGGACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp AAAGGCATTGCACTCTTACCCCTTCCCAGGAGTCAAGGAGATTACCATCTAAGTAAGCACCAAAGGCATTaGACTCTTACCCCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: KGIALLPLPRSQGDYHLSKHQRH*TLTPSQ
Trigger: CTGGGAAGGGGTAAGAGTGCAATGCCTTTGGTGCTT...ACTTAGATGGTAATCTCCTTGACTCCTGGGAAGGGGTAAGAGTGCAATGCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486652.5
CDS-3UTR GCA 90 bp GTTCACTGGTTTATCATCTGGATCAGTATATACTGCGCAACGGGCAAGGCTAGAAAGCACCAAAGGCATTaGACTCTTACCCCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: VHWFIIWISIYCATGKARKHQRH*TLTPSQ
Trigger: CTGGGAAGGGGTAAGAGTGCAATGCCTTTGGTGCTT...TCTAGCCTTGCCCGTTGCGCAGTATATACTGATCCAGATGATAAACCAGTGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp ATCAGTATATACTGCGCAACGGGCAAGGCTAGAATCCATGAACCAAGCTGCAAAAAGCACCAAAGGCATTaGACTCTTACCCCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: ISIYCATGKARIHEPSCKKHQRH*TLTPSQ
Trigger: CTGGGAAGGGGTAAGAGTGCAATGCCTTTGGTGCTT...TTTGCAGCTTGGTTCATGGATTCTAGCCTTGCCCGTTGCGCAGTATATACTGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp TTGTTAGTATCTTGTGGCTGGCTTCATAGTATAAGACTCACTCTTAAGCCTACTTGTTGCTATTGTTGCTaGCGGCGGAGGGGGCGGAAG +
Preference number: 4 (lower is better)
Translates to: LLVSCGWLHSIRLTLKPTCCYCC*RRRGRK
Trigger: CTTCCGCCCCCTCCGCCGCCAGCAACAATAGCAACA...AGTAGGCTTAAGAGTGAGTCTTATACTATGAAGCCAGCCACAAGATACTAACAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678917.1
CDS-3UTR CCA 90 bp CCAAGCTGCAAAGATCTCAAGCTAAATAAGGCGGAAAGATTTGGAGAAACAAAATGTTGCTATTGTTGCTaGCGGCGGAGGGGGCGGAAG +
Preference number: 4 (lower is better)
Translates to: PSCKDLKLNKAERFGETKCCYCC*RRRGRK
Trigger: CTTCCGCCCCCTCCGCCGCCAGCAACAATAGCAACA...TTTTGTTTCTCCAAATCTTTCCGCCTTATTTAGCTTGAGATCTTTGCAGCTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678917.1
CDS-3UTR CCA 90 bp TTCCAAAGTGGTTGTATCGCTGATTCCTACTCTTTTGCTAGATCACACCAAAATGCTGCTGCCCAGTTCTaGGGTGGCCAAGGAAGAGGA +
Preference number: 4 (lower is better)
Translates to: FQSGCIADSYSFARSHQNAAAQF*GGQGRG
Trigger: TCCTCTTCCTTGGCCACCCCAGAACTGGGCAGCAGC...ATTTTGGTGTGATCTAGCAAAAGAGTAGGAATCAGCGATACAACCACTTTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp GTGGATCTATTCCCCTCGCCACACACACACATTTTCAAGGAGCCAATAACATTTGCTGGCCATCATGGATaGAATCTGTGGGTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: VDLFPSPHTHIFKEPITFAGHHG*NLWVPA
Trigger: AGCTGGAACCCACAGATTCCATCCATGATGGCCAGC...AAATGTTATTGGCTCCTTGAAAATGTGTGTGTGTGGCGAGGGGAATAGATCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000480676.2
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp AAGCCTGAATGTAGCACAGTTCTTCACAACCGATGGGGGAATAATTCAACATGGGCTGGCCATCATGGATaGAATCTGTGGGTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: KPECSTVLHNRWGNNSTWAGHHG*NLWVPA
Trigger: AGCTGGAACCCACAGATTCCATCCATGATGGCCAGC...CCATGTTGAATTATTCCCCCATCGGTTGTGAAGAACTGTGCTACATTCAGGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp TTCACTGGTTTATCATCTGGATCAGTATATACTGCGCAACGGGCAAGGCTAGAAGCTGGCCATCATGGATaGAATCTGTGGGTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: FTGLSSGSVYTAQRARLEAGHHG*NLWVPA
Trigger: AGCTGGAACCCACAGATTCCATCCATGATGGCCAGC...TTCTAGCCTTGCCCGTTGCGCAGTATATACTGATCCAGATGATAAACCAGTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp TACTGCGCAACGGGCAAGGCTAGAATCCATGAACCAAGCTGCAAAGATCTCAAGACATACATGCTTTTGTaGATCTATTCCCCTCGCCAC +
Preference number: 4 (lower is better)
Translates to: YCATGKARIHEPSCKDLKTYMLL*IYSPRH
Trigger: GTGGCGAGGGGAATAGATCCACAAAAGCATGTATGT...CTTGAGATCTTTGCAGCTTGGTTCATGGATTCTAGCCTTGCCCGTTGCGCAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp TTTTTCATGACGAGCATGTCTGTCCAGCTATCAATCATGTTTGTTTGCACCAAATGCTCCCTGGTGTGTTaGTTCTTCCCCCAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: FFMTSMSVQLSIMFVCTKCSLVC*FFPQLL
Trigger: CAGCAGCTGGGGGAAGAATCAACACACCAGGGAGCA...TTTGGTGCAAACAAACATGATTGATAGCTGGACAGACATGCTCGTCATGAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000414423.9
ENST00000678555.1
ENST00000678917.1
CDS-3UTR TCA 90 bp CTGAATGTAGCACAGTTCTTCACAACCGATGGGGGAATAATTCAACATGGTGTCCGGGAACCCCGTTATTaGCATTCAGGCTGTTGCTAT +
Preference number: 4 (lower is better)
Translates to: LNVAQFFTTDGGIIQHGVREPRY*HSGCCY
Trigger: ATAGCAACAGCCTGAATGTCAATAACGGGGTTCCCG...GACACCATGTTGAATTATTCCCCCATCGGTTGTGAAGAACTGTGCTACATTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678917.1
CDS-3UTR TCA 90 bp TTGTTAGTATCTTGTGGCTGGCTTCATAGTATAAGACTCACTCTTAAGCCTACTGCCGCTTCTTCTTCTTaGGGCTGCTGCCCAGTTCTG +
Preference number: 4 (lower is better)
Translates to: LLVSCGWLHSIRLTLKPTAASSS*GCCPVL
Trigger: CAGAACTGGGCAGCAGCCTCAAGAAGAAGAAGCGGC...AGTAGGCTTAAGAGTGAGTCTTATACTATGAAGCCAGCCACAAGATACTAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp TTTTTCATGACGAGCATGTCTGTCCAGCTATCAATCATGTTTGTTTGCACCAAAGCCGCTTCTTCTTCTTaGGGCTGCTGCCCAGTTCTG +
Preference number: 4 (lower is better)
Translates to: FFMTSMSVQLSIMFVCTKAASSS*GCCPVL
Trigger: CAGAACTGGGCAGCAGCCTCAAGAAGAAGAAGCGGC...TTTGGTGCAAACAAACATGATTGATAGCTGGACAGACATGCTCGTCATGAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp GTGTCCAACAACGTTCTAACGACGTGCTTCATCTCAACTGGTTACTATGAAGCAAATGACATCCTCATCTaGCTGGGAGAGCCGCTTCTT +
Preference number: 4 (lower is better)
Translates to: VSNNVLTTCFISTGYYEANDILI*LGEPLL
Trigger: AAGAAGCGGCTCTCCCAGTCAGATGAGGATGTCATT...TGCTTCATAGTAACCAGTTGAGATGAAGCACGTCGTTAGAACGTTGTTGGACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp GTTCACTGGTTTATCATCTGGATCAGTATATACTGCGCAACGGGCAAGGCTAGAATCCTGACTCTTGCATaGGGAGATCAACAGTCTGGT +
Preference number: 4 (lower is better)
Translates to: VHWFIIWISIYCATGKARILTLA*GDQQSG
Trigger: ACCAGACTGTTGATCTCCTCATGCAAGAGTCAGGAT...TCTAGCCTTGCCCGTTGCGCAGTATATACTGATCCAGATGATAAACCAGTGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp AGCATGTCTGTCCAGCTATCAATCATGTTTGTTTGCACCAAATCCCAAGCCATTTCACAGCGTAGAACTTaGAGTGCCTCCAGGACCTTG +
Preference number: 4 (lower is better)
Translates to: SMSVQLSIMFVCTKSQAISQRRT*SASRTL
Trigger: CAAGGTCCTGGAGGCACTTCAAGTTCTACGCTGTGA...AATGGCTTGGGATTTGGTGCAAACAAACATGATTGATAGCTGGACAGACATGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp GACATAGTTCACTGGTTTATCATCTGGATCAGTATATACTGCGCAACGGGCAAGTCGCTGGTGTGTATCTaGTGCCAGAACAGTCTTTCC +
Preference number: 4 (lower is better)
Translates to: DIVHWFIIWISIYCATGKSLVCI*CQNSLS
Trigger: GGAAAGACTGTTCTGGCATCAGATACACACCAGCGA...CTTGCCCGTTGCGCAGTATATACTGATCCAGATGATAAACCAGTGAACTATGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp CTGAATGTAGCACAGTTCTTCACAACCGATGGGGGAATAATTCAACATGGTGTCTCGCTGGTGTGTATCTaGTGCCAGAACAGTCTTTCC +
Preference number: 4 (lower is better)
Translates to: LNVAQFFTTDGGIIQHGVSLVCI*CQNSLS
Trigger: GGAAAGACTGTTCTGGCATCAGATACACACCAGCGA...GACACCATGTTGAATTATTCCCCCATCGGTTGTGAAGAACTGTGCTACATTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp TACTGCGCAACGGGCAAGGCTAGAATCCATGAACCAAGCTGCAAAGATCTCAAGCAATGGAAGAATTTTTaGCATCCAAGCCCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: YCATGKARIHEPSCKDLKQWKNF*HPSPLL
Trigger: GAGAAGAGGGCTTGGATGTCAAAAATTCTTCCATTG...CTTGAGATCTTTGCAGCTTGGTTCATGGATTCTAGCCTTGCCCGTTGCGCAGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp ATCTGGATCAGTATATACTGCGCAACGGGCAAGGCTAGAATCCATGAACCAAGCTACAAAAACCAAAGCTaGAGCTTTGTCATCCCTCCC +
Preference number: 4 (lower is better)
Translates to: IWISIYCATGKARIHEPSYKNQS*SFVIPP
Trigger: GGGAGGGATGACAAAGCTTCAGCTTTGGTTTTTGTA...GCTTGGTTCATGGATTCTAGCCTTGCCCGTTGCGCAGTATATACTGATCCAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp ACAACCGATGGGGGAATAATTCAACATGGTGTCCAACAACGTTCTAACGACGTGTATATTTACCCACTGTaGGGCAGAGGTGATAGGGTC +
Preference number: 4 (lower is better)
Translates to: TTDGGIIQHGVQQRSNDVYIYPL*GRGDRV
Trigger: GACCCTATCACCTCTGCCTCACAGTGGGTAAATATA...CACGTCGTTAGAACGTTGTTGGACACCATGTTGAATTATTCCCCCATCGGTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp TCAACTGGTTACTATGAAGCAAGGTGTAAATGTTTGGCCCCAATCGGGCTTCAGCGACATCCTGACTCTTaGATGAGGAGATCAACAGTC +
Preference number: 4 (lower is better)
Translates to: STGYYEARCKCLAPIGLQRHPDS*MRRSTV
Trigger: GACTGTTGATCTCCTCATGCAAGAGTCAGGATGTCG...CTGAAGCCCGATTGGGGCCAAACATTTACACCTTGCTTCATAGTAACCAGTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp ATGACGAGCATGTCTGTCCAGCTATCAATCATGTTTGTTTGCACCAAATCCCAAGTGCCTCCAGGACCTTaGCATCCTCCAGGTATTCTA +
Preference number: 4 (lower is better)
Translates to: MTSMSVQLSIMFVCTKSQVPPGP*HPPGIL
Trigger: TAGAATACCTGGAGGATGGCAAGGTCCTGGAGGCAC...TTGGGATTTGGTGCAAACAAACATGATTGATAGCTGGACAGACATGCTCGTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp AGCATGTCTGTCCAGCTATCAATCATGTTTGTTTGCACCAAATCCCAAGCCATTTGTAGTTCCACCGCCTaGCGCAGGAGAGTCTGTAAA +
Preference number: 4 (lower is better)
Translates to: SMSVQLSIMFVCTKSQAICSSTA*RRRVCK
Trigger: TTTACAGACTCTCCTGCGGCAGGCGGTGGAACTACA...AATGGCTTGGGATTTGGTGCAAACAAACATGATTGATAGCTGGACAGACATGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp AAGCCTGAATGTAGCACAGTTCTTCACAACCGATGGGGGAATAATTCAACATGGAAGCACCAAAGGCATTaGACTCTTACCCCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: KPECSTVLHNRWGNNSTWKHQRH*TLTPSQ
Trigger: CTGGGAAGGGGTAAGAGTGCAATGCCTTTGGTGCTT...CCATGTTGAATTATTCCCCCATCGGTTGTGAAGAACTGTGCTACATTCAGGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp GTTCACTGGTTTATCATCTGGATCAGTATATACTGCGCAACGGGCAAGGCTAGATTTACTGTACGTGTGTaGCCTGTCAGCTCCGCAATT +
Preference number: 4 (lower is better)
Translates to: VHWFIIWISIYCATGKARFTVRV*PVSSAI
Trigger: AATTGCGGAGCTGACAGGGCACACACGTACAGTAAA...TCTAGCCTTGCCCGTTGCGCAGTATATACTGATCCAGATGATAAACCAGTGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp ATCAGTATATACTGCGCAACGGGCAAGGCTAGAATCCATGAACCAAGCTGCAAATTTACTGTACGTGTGTaGCCTGTCAGCTCCGCAATT +
Preference number: 4 (lower is better)
Translates to: ISIYCATGKARIHEPSCKFTVRV*PVSSAI
Trigger: AATTGCGGAGCTGACAGGGCACACACGTACAGTAAA...TTTGCAGCTTGGTTCATGGATTCTAGCCTTGCCCGTTGCGCAGTATATACTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp GTAGAACTTGAAGTGCCTCCAGGACCTTGCCATCCTCCAGGTATTCTAGGTACTGTGGTCTATAAAAGGTaGTGGTCCCCATATTCTAAC +
Preference number: 4 (lower is better)
Translates to: VELEVPPGPCHPPGILGTVVYKR*WSPYSN
Trigger: GTTAGAATATGGGGACCAGCACCTTTTATAGACCAC...AGTACCTAGAATACCTGGAGGATGGCAAGGTCCTGGAGGCACTTCAAGTTCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486652.5
CDS-3UTR GCA 90 bp TCAACTGGTTACTATGAAGCAAGGTGTAAATGTTTGGCCCCAATCGGGCTTCAGTGGATCAGTATATACTaGGCAACGGGCAAGGCTAGA +
Preference number: 4 (lower is better)
Translates to: STGYYEARCKCLAPIGLQWISIY*ATGKAR
Trigger: TCTAGCCTTGCCCGTTGCGCAGTATATACTGATCCA...CTGAAGCCCGATTGGGGCCAAACATTTACACCTTGCTTCATAGTAACCAGTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp TACTGCGCAACGGGCAAGGCTAGAATCCATGAACCAAGCTGCAAAGATCTCAAGTCTGAGTGTTACAAATaGACCGTAGCACACTGTAAC +
Preference number: 4 (lower is better)
Translates to: YCATGKARIHEPSCKDLKSECYK*TVAHCN
Trigger: GTTACAGTGTGCTACGGTGCATTTGTAACACTCAGA...CTTGAGATCTTTGCAGCTTGGTTCATGGATTCTAGCCTTGCCCGTTGCGCAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp TGTATCGCTGATTCCTACTCTTTTGCTAGATCACACCAAAATTACTTCCTAAGTGCTGCTGCCCAGTTCTaGGGTGGCCAAGGAAGAGGA +
Preference number: 4 (lower is better)
Translates to: CIADSYSFARSHQNYFLSAAAQF*GGQGRG
Trigger: TCCTCTTCCTTGGCCACCCCAGAACTGGGCAGCAGC...ACTTAGGAAGTAATTTTGGTGTGATCTAGCAAAAGAGTAGGAATCAGCGATACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp GTGTCCAACAACGTTCTAACGACGTGCTTCATCTCAACTGGTTACTATGAAGCAACATCCTCATCTGACTaGGAGAGCCGCTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: VSNNVLTTCFISTGYYEATSSSD*ESRFFF
Trigger: GAAGAAGAAGCGGCTCTCCCAGTCAGATGAGGATGT...TGCTTCATAGTAACCAGTTGAGATGAAGCACGTCGTTAGAACGTTGTTGGACAC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp GTGGATCTATTCCCCTCGCCACACACACACATTTTCAAGGAGCCAATAACATTTACATCCTCATCTGACTaGGAGAGCCGCTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: VDLFPSPHTHIFKEPITFTSSSD*ESRFFF
Trigger: GAAGAAGAAGCGGCTCTCCCAGTCAGATGAGGATGT...AAATGTTATTGGCTCCTTGAAAATGTGTGTGTGTGGCGAGGGGAATAGATCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp ACAACCGATGGGGGAATAATTCAACATGGTGTCCAACAACGTTCTAACGACGTGCTGCTGCGTATAACATaGGAACTGCCTCCTACTACA +
Preference number: 4 (lower is better)
Translates to: TTDGGIIQHGVQQRSNDVLLRIT*ELPPTT
Trigger: TGTAGTAGGAGGCAGTTCCCATGTTATACGCAGCAG...CACGTCGTTAGAACGTTGTTGGACACCATGTTGAATTATTCCCCCATCGGTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp TCATCTGGATCAGTATATACTGCGCAACGGGCAAGGCTAGAATCCATGAACCAAAAAGCGCTTCCCATCTaGATTCCAAGCCACACTTGT +
Preference number: 4 (lower is better)
Translates to: SSGSVYTAQRARLESMNQKALPI*IPSHTC
Trigger: ACAAGTGTGGCTTGGAATCCAGATGGGAAGCGCTTT...TTGGTTCATGGATTCTAGCCTTGCCCGTTGCGCAGTATATACTGATCCAGATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp ATCAGTATATACTGCGCAACGGGCAAGGCTAGAATCCATGAACCAAGCTGCAAAAAAGCGCTTCCCATCTaGATTCCAAGCCACACTTGT +
Preference number: 4 (lower is better)
Translates to: ISIYCATGKARIHEPSCKKALPI*IPSHTC
Trigger: ACAAGTGTGGCTTGGAATCCAGATGGGAAGCGCTTT...TTTGCAGCTTGGTTCATGGATTCTAGCCTTGCCCGTTGCGCAGTATATACTGAT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp TCTCAACTGGTTACTATGAAGCAAGGTGTAAATGTTTGGCCCCAATCGGGCTTCTGTCAGCTCCGCAATTaGCAGTTCACTACGTTTGTG +
Preference number: 4 (lower is better)
Translates to: SQLVTMKQGVNVWPQSGFCQLRN*QFTTFV
Trigger: CACAAACGTAGTGAACTGCCAATTGCGGAGCTGACA...GAAGCCCGATTGGGGCCAAACATTTACACCTTGCTTCATAGTAACCAGTTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp TCAGATATGGTTTCTGAAATGGAAGTAATGTGTTGGAGGGCAACCCAAAAGGACGCTGGCCATCATGGATaGAATCTGTGGGTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: SDMVSEMEVMCWRATQKDAGHHG*NLWVPA
Trigger: AGCTGGAACCCACAGATTCCATCCATGATGGCCAGC...GTCCTTTTGGGTTGCCCTCCAACACATTACTTCCATTTCAGAAACCATATCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000480676.2
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp GAACCAAGCTGCAAAGATCTCAAGCTAAATAAGGCGGAAAGATTTGGAGAAACAAGGCGCTGGCCATCATaGATGGAATCTGTGGGTTCC +
Preference number: 4 (lower is better)
Translates to: EPSCKDLKLNKAERFGETRRWPS*MESVGS
Trigger: GGAACCCACAGATTCCATCCATGATGGCCAGCGCCT...TGTTTCTCCAAATCTTTCCGCCTTATTTAGCTTGAGATCTTTGCAGCTTGGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp CTGGATTCCAAGCCACACTTGTCAAACTGTCTTCATGAGACTGGCTCATTTTTGCATCATCTGAGGCGCTaGCCATCATGGATGGAATCT +
Preference number: 4 (lower is better)
Translates to: LDSKPHLSNCLHETGSFLHHLRR*PSWMES
Trigger: AGATTCCATCCATGATGGCCAGCGCCTCAGATGATG...CAAAAATGAGCCAGTCTCATGAAGACAGTTTGACAAGTGTGGCTTGGAATCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486652.5
CDS-3UTR CCA 90 bp GTGTCCAACAACGTTCTAACGACGTGCTTCATCTCAACTGGTTACTATGAAGCACATCATCTGAGGCGCTaGCCATCATGGATGGAATCT +
Preference number: 4 (lower is better)
Translates to: VSNNVLTTCFISTGYYEAHHLRR*PSWMES
Trigger: AGATTCCATCCATGATGGCCAGCGCCTCAGATGATG...TGCTTCATAGTAACCAGTTGAGATGAAGCACGTCGTTAGAACGTTGTTGGACAC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp ATCAGTATATACTGCGCAACGGGCAAGGCTAGAATCCATGAACCAAGCTGCAAACAAGGTGTAAATGTTTaGCCCCAATCGGGCTTCAGA +
Preference number: 4 (lower is better)
Translates to: ISIYCATGKARIHEPSCKQGVNV*PQSGFR
Trigger: TCTGAAGCCCGATTGGGGCCAAACATTTACACCTTG...TTTGCAGCTTGGTTCATGGATTCTAGCCTTGCCCGTTGCGCAGTATATACTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp TCCTATCCAATGTATACTCTTCAGACTAATGCACTCTTTCTATCAAGCCTTCTAGCCGCTTCTTCTTCTTaGGGCTGCTGCCCAGTTCTG +
Preference number: 4 (lower is better)
Translates to: SYPMYTLQTNALFLSSLLAASSS*GCCPVL
Trigger: CAGAACTGGGCAGCAGCCTCAAGAAGAAGAAGCGGC...TAGAAGGCTTGATAGAAAGAGTGCATTAGTCTGAAGAGTATACATTGGATAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp CATGCTACTGCATTCCTCTTCAATATTCTGGTGGTCTATAAAAGGTGCTGGTCCATCCTGACTCTTGCATaGGGAGATCAACAGTCTGGT +
Preference number: 4 (lower is better)
Translates to: HATAFLFNILVVYKRCWSILTLA*GDQQSG
Trigger: ACCAGACTGTTGATCTCCTCATGCAAGAGTCAGGAT...GGACCAGCACCTTTTATAGACCACCAGAATATTGAAGAGGAATGCAGTAGCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486652.5
CDS-3UTR TCA 90 bp GTGGATCTATTCCCCTCGCCACACACACACATTTTCAAGGAGCCAATAACATTTATCCTGACTCTTGCATaGGGAGATCAACAGTCTGGT +
Preference number: 4 (lower is better)
Translates to: VDLFPSPHTHIFKEPITFILTLA*GDQQSG
Trigger: ACCAGACTGTTGATCTCCTCATGCAAGAGTCAGGAT...AAATGTTATTGGCTCCTTGAAAATGTGTGTGTGTGGCGAGGGGAATAGATCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp ACAACCGATGGGGGAATAATTCAACATGGTGTCCAACAACGTTCTAACGACGTGATTCCCAACAACGTTTaGGAGATTTCAAGTGCGCCT +
Preference number: 4 (lower is better)
Translates to: TTDGGIIQHGVQQRSNDVIPNNV*EISSAP
Trigger: AGGCGCACTTGAAATCTCTCAAACGTTGTTGGGAAT...CACGTCGTTAGAACGTTGTTGGACACCATGTTGAATTATTCCCCCATCGGTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp TCTCAACTGGTTACTATGAAGCAAGGTGTAAATGTTTGGCCCCAATCGGGCTTCATTCCCAACAACGTTTaGGAGATTTCAAGTGCGCCT +
Preference number: 4 (lower is better)
Translates to: SQLVTMKQGVNVWPQSGFIPNNV*EISSAP
Trigger: AGGCGCACTTGAAATCTCTCAAACGTTGTTGGGAAT...GAAGCCCGATTGGGGCCAAACATTTACACCTTGCTTCATAGTAACCAGTTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp TTAAGACAGACCCGGAAAACAAACTCACCTAGCTGCTATAGAAACCTTTGCATATCACAGCGTAGAACTTaGAGTGCCTCCAGGACCTTG +
Preference number: 4 (lower is better)
Translates to: LRQTRKTNSPSCYRNLCISQRRT*SASRTL
Trigger: CAAGGTCCTGGAGGCACTTCAAGTTCTACGCTGTGA...TATGCAAAGGTTTCTATAGCAGCTAGGTGAGTTTGTTTTCCGGGTCTGTCTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp CTTCCCATCTGGATTCCAAGCCACACTTGTCAAACTGTCTTCATGAGACTGGCTTCAAGTTTGGTATTGTaGTATAGGCACCGATCCCTT +
Preference number: 4 (lower is better)
Translates to: LPIWIPSHTCQTVFMRLASSLVL*YRHRSL
Trigger: AAGGGATCGGTGCCTATATCACAATACCAAACTTGA...AGCCAGTCTCATGAAGACAGTTTGACAAGTGTGGCTTGGAATCCAGATGGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486652.5
CDS-3UTR TCA 90 bp TCAGATATGGTTTCTGAAATGGAAGTAATGTGTTGGAGGGCAACCCAAAAGGACTCGCTGGTGTGTATCTaGTGCCAGAACAGTCTTTCC +
Preference number: 4 (lower is better)
Translates to: SDMVSEMEVMCWRATQKDSLVCI*CQNSLS
Trigger: GGAAAGACTGTTCTGGCATCAGATACACACCAGCGA...GTCCTTTTGGGTTGCCCTCCAACACATTACTTCCATTTCAGAAACCATATCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000480676.2
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp AGCACTGTTTCTGACCATGTCTCATGTGGTATTCCAGAAGAGCATCAGTTATACTCGCTGGTGTGTATCTaGTGCCAGAACAGTCTTTCC +
Preference number: 4 (lower is better)
Translates to: STVSDHVSCGIPEEHQLYSLVCI*CQNSLS
Trigger: GGAAAGACTGTTCTGGCATCAGATACACACCAGCGA...GTATAACTGATGCTCTTCTGGAATACCACATGAGACATGGTCAGAAACAGTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp AGTACCAGTATGTACAGGAAGCTGCCAGTTAAGACAGACCCGGAAAACAAACTCTCCAAGCACTGTTTCTaGCCATGTCTCATGTGGTAT +
Preference number: 4 (lower is better)
Translates to: STSMYRKLPVKTDPENKLSKHCF*PCLMWY
Trigger: ATACCACATGAGACATGGTCAGAAACAGTGCTTGGA...GAGTTTGTTTTCCGGGTCTGTCTTAACTGGCAGCTTCCTGTACATACTGGTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp ATCAGTATATACTGCGCAACGGGCAAGGCTAGAATCCATGAACCAAGCTGCAAATCCAAGCACTGTTTCTaGCCATGTCTCATGTGGTAT +
Preference number: 4 (lower is better)
Translates to: ISIYCATGKARIHEPSCKSKHCF*PCLMWY
Trigger: ATACCACATGAGACATGGTCAGAAACAGTGCTTGGA...TTTGCAGCTTGGTTCATGGATTCTAGCCTTGCCCGTTGCGCAGTATATACTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp TACTGCGCAACGGGCAAGGCTAGAATCCATGAACCAAGCTGCAAAGATCTCAAGTTCAAGATCGGGTACTaGTGTTCCTTCAGGAATAAA +
Preference number: 4 (lower is better)
Translates to: YCATGKARIHEPSCKDLKFKIGY*CSFRNK
Trigger: TTTATTCCTGAAGGAACATCAGTACCCGATCTTGAA...CTTGAGATCTTTGCAGCTTGGTTCATGGATTCTAGCCTTGCCCGTTGCGCAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp AGCACTGTTTCTGACCATGTCTCATGTGGTATTCCAGAAGAGCATCAGTTATACGTGCCAAATTGCCCCTaGATGGGCACAAATCTGAGT +
Preference number: 4 (lower is better)
Translates to: STVSDHVSCGIPEEHQLYVPNCP*MGTNLS
Trigger: ACTCAGATTTGTGCCCATTCAGGGGCAATTTGGCAC...GTATAACTGATGCTCTTCTGGAATACCACATGAGACATGGTCAGAAACAGTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp ATGACGAGCATGTCTGTCCAGCTATCAATCATGTTTGTTTGCACCAAATCCCAAGTGCCAAATTGCCCCTaGATGGGCACAAATCTGAGT +
Preference number: 4 (lower is better)
Translates to: MTSMSVQLSIMFVCTKSQVPNCP*MGTNLS
Trigger: ACTCAGATTTGTGCCCATTCAGGGGCAATTTGGCAC...TTGGGATTTGGTGCAAACAAACATGATTGATAGCTGGACAGACATGCTCGTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp ATCAGTATATACTGCGCAACGGGCAAGGCTAGAATCCATGAACCAAGCTGCAAAACTTCAGAAGCACTCTaGAAACTCAGATCTAGGGGT +
Preference number: 4 (lower is better)
Translates to: ISIYCATGKARIHEPSCKTSEAL*KLRSRG
Trigger: ACCCCTAGATCTGAGTTTTCAGAGTGCTTCTGAAGT...TTTGCAGCTTGGTTCATGGATTCTAGCCTTGCCCGTTGCGCAGTATATACTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp GTTCACTGGTTTATCATCTGGATCAGTATATACTGCGCAACGGGCAAGGCTAGATACAAAAACCAAAGCTaGAGCTTTGTCATCCCTCCC +
Preference number: 4 (lower is better)
Translates to: VHWFIIWISIYCATGKARYKNQS*SFVIPP
Trigger: GGGAGGGATGACAAAGCTTCAGCTTTGGTTTTTGTA...TCTAGCCTTGCCCGTTGCGCAGTATATACTGATCCAGATGATAAACCAGTGAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp TTCACTGGTTTATCATCTGGATCAGTATATACTGCGCAACGGGCAAGGCTAGAATATATTTACCCACTGTaGGGCAGAGGTGATAGGGTC +
Preference number: 4 (lower is better)
Translates to: FTGLSSGSVYTAQRARLEYIYPL*GRGDRV
Trigger: GACCCTATCACCTCTGCCTCACAGTGGGTAAATATA...TTCTAGCCTTGCCCGTTGCGCAGTATATACTGATCCAGATGATAAACCAGTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp TCATCTGGATCAGTATATACTGCGCAACGGGCAAGGCTAGAATCCATGAACCAAATCCTCACAATAGCATaGGGAGAATGCACTAAAGGC +
Preference number: 4 (lower is better)
Translates to: SSGSVYTAQRARLESMNQILTIA*GECTKG
Trigger: GCCTTTAGTGCATTCTCCTCATGCTATTGTGAGGAT...TTGGTTCATGGATTCTAGCCTTGCCCGTTGCGCAGTATATACTGATCCAGATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651911.2
CDS-3UTR GCA 90 bp AGCTGCAAAGATCTCAAGCTAAATAAGGCGGAAAGATTTGGAGAAACAAAAGAATCCTCCTCCTCCTCCTaGCCCATTGGCCTGCATGAT +
Preference number: 4 (lower is better)
Translates to: SCKDLKLNKAERFGETKESSSSS*PIGLHD
Trigger: ATCATGCAGGCCAATGGGGCAGGAGGAGGAGGAGGA...TTCTTTTGTTTCTCCAAATCTTTCCGCCTTATTTAGCTTGAGATCTTTGCAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414423.9
ENST00000678555.1
ENST00000678917.1
CDS-3UTR GCA 90 bp TGTAGCACAGTTCTTCACAACCGATGGGGGAATAATTCAACATGGTGTCCAACACGACATCCTGACTCTTaGATGAGGAGATCAACAGTC +
Preference number: 4 (lower is better)
Translates to: CSTVLHNRWGNNSTWCPTRHPDS*MRRSTV
Trigger: GACTGTTGATCTCCTCATGCAAGAGTCAGGATGTCG...TGTTGGACACCATGTTGAATTATTCCCCCATCGGTTGTGAAGAACTGTGCTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp GTGGATCTATTCCCCTCGCCACACACACACATTTTCAAGGAGCCAATAACATTTCGACATCCTGACTCTTaGATGAGGAGATCAACAGTC +
Preference number: 4 (lower is better)
Translates to: VDLFPSPHTHIFKEPITFRHPDS*MRRSTV
Trigger: GACTGTTGATCTCCTCATGCAAGAGTCAGGATGTCG...AAATGTTATTGGCTCCTTGAAAATGTGTGTGTGTGGCGAGGGGAATAGATCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp ATCTGGATCAGTATATACTGCGCAACGGGCAAGGCTAGAATCCATGAACCAAGCTTGAGAGATTTCAAGTaGGCCTCTTACCACAATAGC +
Preference number: 4 (lower is better)
Translates to: IWISIYCATGKARIHEPSLRDFK*ASYHNS
Trigger: GCTATTGTGGTAAGAGGCGCACTTGAAATCTCTCAA...GCTTGGTTCATGGATTCTAGCCTTGCCCGTTGCGCAGTATATACTGATCCAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp TTAAGACAGACCCGGAAAACAAACTCACCTAGCTGCTATAGAAACCTTTGCATATGTAGTTCCACCGCCTaGCGCAGGAGAGTCTGTAAA +
Preference number: 4 (lower is better)
Translates to: LRQTRKTNSPSCYRNLCICSSTA*RRRVCK
Trigger: TTTACAGACTCTCCTGCGGCAGGCGGTGGAACTACA...TATGCAAAGGTTTCTATAGCAGCTAGGTGAGTTTGTTTTCCGGGTCTGTCTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp TACACAGAAGAGCAACAAGAATGGTATCCTGCCAGACAAAAGACAGGAAGGAAAAAGCACCAAAGGCATTaGACTCTTACCCCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: YTEEQQEWYPARQKTGRKKHQRH*TLTPSQ
Trigger: CTGGGAAGGGGTAAGAGTGCAATGCCTTTGGTGCTT...TTTCCTTCCTGTCTTTTGTCTGGCAGGATACCATTCTTGTTGCTCTTCTGTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp ACAACCGATGGGGGAATAATTCAACATGGTGTCCAACAACGTTCTAACGACGTGAGAGTAGAATCTGAGTaGCAAATTGCCCCTGAATGG +
Preference number: 4 (lower is better)
Translates to: TTDGGIIQHGVQQRSNDVRVESE*QIAPEW
Trigger: CCATTCAGGGGCAATTTGGCACTCAGATTCTACTCT...CACGTCGTTAGAACGTTGTTGGACACCATGTTGAATTATTCCCCCATCGGTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp TCATCTGGATCAGTATATACTGCGCAACGGGCAAGGCTAGAATCCATGAACCAAAGAGTAGAATCTGAGTaGCAAATTGCCCCTGAATGG +
Preference number: 4 (lower is better)
Translates to: SSGSVYTAQRARLESMNQRVESE*QIAPEW
Trigger: CCATTCAGGGGCAATTTGGCACTCAGATTCTACTCT...TTGGTTCATGGATTCTAGCCTTGCCCGTTGCGCAGTATATACTGATCCAGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp AGCACTGTTTCTGACCATGTCTCATGTGGTATTCCAGAAGAGCATCAGTTATACGTATGTACAGGAAGCTaGCAGTTAAGACAGACCCGG +
Preference number: 4 (lower is better)
Translates to: STVSDHVSCGIPEEHQLYVCTGS*QLRQTR
Trigger: CCGGGTCTGTCTTAACTGGCAGCTTCCTGTACATAC...GTATAACTGATGCTCTTCTGGAATACCACATGAGACATGGTCAGAAACAGTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp TCAGATATGGTTTCTGAAATGGAAGTAATGTGTTGGAGGGCAACCCAAAAGGACGTATGTACAGGAAGCTaGCAGTTAAGACAGACCCGG +
Preference number: 4 (lower is better)
Translates to: SDMVSEMEVMCWRATQKDVCTGS*QLRQTR
Trigger: CCGGGTCTGTCTTAACTGGCAGCTTCCTGTACATAC...GTCCTTTTGGGTTGCCCTCCAACACATTACTTCCATTTCAGAAACCATATCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp AAAATATATATACTGAGTTCAATGGGTAAGCCTGAATGTAGCACAGTTCTTCACGCTGCTGCCCAGTTCTaGGGTGGCCAAGGAAGAGGA +
Preference number: 4 (lower is better)
Translates to: KIYILSSMGKPECSTVLHAAAQF*GGQGRG
Trigger: TCCTCTTCCTTGGCCACCCCAGAACTGGGCAGCAGC...GTGAAGAACTGTGCTACATTCAGGCTTACCCATTGAACTCAGTATATATATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp TATATTAAATCAGATATGGTTTCTGAAATGGAAGTAATGTGTTGGAGGGCAACCGCTGCTGCCCAGTTCTaGGGTGGCCAAGGAAGAGGA +
Preference number: 4 (lower is better)
Translates to: YIKSDMVSEMEVMCWRATAAAQF*GGQGRG
Trigger: TCCTCTTCCTTGGCCACCCCAGAACTGGGCAGCAGC...GGTTGCCCTCCAACACATTACTTCCATTTCAGAAACCATATCTGATTTAATATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp TACACAGAAGAGCAACAAGAATGGTATCCTGCCAGACAAAAGACAGGAAGGAAAACATCCTCATCTGACTaGGAGAGCCGCTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: YTEEQQEWYPARQKTGRKTSSSD*ESRFFF
Trigger: GAAGAAGAAGCGGCTCTCCCAGTCAGATGAGGATGT...TTTCCTTCCTGTCTTTTGTCTGGCAGGATACCATTCTTGTTGCTCTTCTGTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp AGCATGTCTGTCCAGCTATCAATCATGTTTGTTTGCACCAAATCCCAAGCCATTACATCCTCATCTGACTaGGAGAGCCGCTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: SMSVQLSIMFVCTKSQAITSSSD*ESRFFF
Trigger: GAAGAAGAAGCGGCTCTCCCAGTCAGATGAGGATGT...AATGGCTTGGGATTTGGTGCAAACAAACATGATTGATAGCTGGACAGACATGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp ATGACGAGCATGTCTGTCCAGCTATCAATCATGTTTGTTTGCACCAAATCCCAAACATCCTCATCTGACTaGGAGAGCCGCTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: MTSMSVQLSIMFVCTKSQTSSSD*ESRFFF
Trigger: GAAGAAGAAGCGGCTCTCCCAGTCAGATGAGGATGT...TTGGGATTTGGTGCAAACAAACATGATTGATAGCTGGACAGACATGCTCGTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp GACATAGTTCACTGGTTTATCATCTGGATCAGTATATACTGCGCAACGGGCAAGCGTAGGTCTTCTGCATaGCTACACATCAGATACCCA +
Preference number: 4 (lower is better)
Translates to: DIVHWFIIWISIYCATGKRRSSA*LHIRYP
Trigger: TGGGTATCTGATGTGTAGCCATGCAGAAGACCTACG...CTTGCCCGTTGCGCAGTATATACTGATCCAGATGATAAACCAGTGAACTATGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp TACTGCGCAACGGGCAAGGCTAGAATCCATGAACCAAGCTGCAAAGATCTCAAGCTCCTACTACAAACATaGTCTATAAGCAGAGACACA +
Preference number: 4 (lower is better)
Translates to: YCATGKARIHEPSCKDLKLLLQT*SISRDT
Trigger: TGTGTCTCTGCTTATAGACCATGTTTGTAGTAGGAG...CTTGAGATCTTTGCAGCTTGGTTCATGGATTCTAGCCTTGCCCGTTGCGCAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp GTGGATCTATTCCCCTCGCCACACACACACATTTTCAAGGAGCCAATAACATTTAAAGCGCTTCCCATCTaGATTCCAAGCCACACTTGT +
Preference number: 4 (lower is better)
Translates to: VDLFPSPHTHIFKEPITFKALPI*IPSHTC
Trigger: ACAAGTGTGGCTTGGAATCCAGATGGGAAGCGCTTT...AAATGTTATTGGCTCCTTGAAAATGTGTGTGTGTGGCGAGGGGAATAGATCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000480676.2
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp GTGTCCAACAACGTTCTAACGACGTGCTTCATCTCAACTGGTTACTATGAAGCAAAAGCGCTTCCCATCTaGATTCCAAGCCACACTTGT +
Preference number: 4 (lower is better)
Translates to: VSNNVLTTCFISTGYYEAKALPI*IPSHTC
Trigger: ACAAGTGTGGCTTGGAATCCAGATGGGAAGCGCTTT...TGCTTCATAGTAACCAGTTGAGATGAAGCACGTCGTTAGAACGTTGTTGGACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp TTCATTACAATGCTCCGTAAGTATCTGCTGCGTATAACATGGGAACTGCCTCCTCATGGATGGAATCTGTaGGTTCCAGCTCACACAGTT +
Preference number: 4 (lower is better)
Translates to: FITMLRKYLLRITWELPPHGWNL*VPAHTV
Trigger: AACTGTGTGAGCTGGAACCCACAGATTCCATCCATG...AGGAGGCAGTTCCCATGTTATACGCAGCAGATACTTACGGAGCATTGTAATGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486652.5
CDS-3UTR CCA 90 bp TTCACTGGTTTATCATCTGGATCAGTATATACTGCGCAACGGGCAAGGCTAGAACATGGATGGAATCTGTaGGTTCCAGCTCACACAGTT +
Preference number: 4 (lower is better)
Translates to: FTGLSSGSVYTAQRARLEHGWNL*VPAHTV
Trigger: AACTGTGTGAGCTGGAACCCACAGATTCCATCCATG...TTCTAGCCTTGCCCGTTGCGCAGTATATACTGATCCAGATGATAAACCAGTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp AAATATACCAGTATTAACCAAACCTTAAACTCAGAGGGCACTTCACATGTGCACAGGCGCTGGCCATCATaGATGGAATCTGTGGGTTCC +
Preference number: 4 (lower is better)
Translates to: KYTSINQTLNSEGTSHVHRRWPS*MESVGS
Trigger: GGAACCCACAGATTCCATCCATGATGGCCAGCGCCT...GTGCACATGTGAAGTGCCCTCTGAGTTTAAGGTTTGGTTAATACTGGTATATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000480676.2
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp CCAAGCTGCAAAGATCTCAAGCTAAATAAGGCGGAAAGATTTGGAGAAACAAAAAGGCGCTGGCCATCATaGATGGAATCTGTGGGTTCC +
Preference number: 4 (lower is better)
Translates to: PSCKDLKLNKAERFGETKRRWPS*MESVGS
Trigger: GGAACCCACAGATTCCATCCATGATGGCCAGCGCCT...TTTTGTTTCTCCAAATCTTTCCGCCTTATTTAGCTTGAGATCTTTGCAGCTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp TACACAGAAGAGCAACAAGAATGGTATCCTGCCAGACAAAAGACAGGAAGGAAACATCATCTGAGGCGCTaGCCATCATGGATGGAATCT +
Preference number: 4 (lower is better)
Translates to: YTEEQQEWYPARQKTGRKHHLRR*PSWMES
Trigger: AGATTCCATCCATGATGGCCAGCGCCTCAGATGATG...TTTCCTTCCTGTCTTTTGTCTGGCAGGATACCATTCTTGTTGCTCTTCTGTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp AAGCCTGAATGTAGCACAGTTCTTCACAACCGATGGGGGAATAATTCAACATGGCAAGGTGTAAATGTTTaGCCCCAATCGGGCTTCAGA +
Preference number: 4 (lower is better)
Translates to: KPECSTVLHNRWGNNSTWQGVNV*PQSGFR
Trigger: TCTGAAGCCCGATTGGGGCCAAACATTTACACCTTG...CCATGTTGAATTATTCCCCCATCGGTTGTGAAGAACTGTGCTACATTCAGGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp TCAACTGGTTACTATGAAGCAAGGTGTAAATGTTTGGCCCCAATCGGGCTTCAGACATACATGCTTTTGTaGATCTATTCCCCTCGCCAC +
Preference number: 4 (lower is better)
Translates to: STGYYEARCKCLAPIGLQTYMLL*IYSPRH
Trigger: GTGGCGAGGGGAATAGATCCACAAAAGCATGTATGT...CTGAAGCCCGATTGGGGCCAAACATTTACACCTTGCTTCATAGTAACCAGTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
3UTR CAA 72 bp TCACAAAGCGCTTCCCATCTGGATTCCAAGCCACACTaGTCAAACTGTCTTCATGAGACTGGCTCATTTTTG +
Preference number: 4 (lower is better)
Translates to: SQSASHLDSKPH*SNCLHETGSFL
Trigger: CAAAAATGAGCCAGTCTCATGAAGACAGTTTGACAAGTGTGGCTTGGAATCCAGATGGGAAGCGCTTTGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486652.5
CDS-3UTR TCA 90 bp AGCATGTCTGTCCAGCTATCAATCATGTTTGTTTGCACCAAATCCCAAGCCATTATCCTGACTCTTGCATaGGGAGATCAACAGTCTGGT +
Preference number: 4 (lower is better)
Translates to: SMSVQLSIMFVCTKSQAIILTLA*GDQQSG
Trigger: ACCAGACTGTTGATCTCCTCATGCAAGAGTCAGGAT...AATGGCTTGGGATTTGGTGCAAACAAACATGATTGATAGCTGGACAGACATGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp GTTCACTGGTTTATCATCTGGATCAGTATATACTGCGCAACGGGCAAGGCTAGATCTCCTTCCATGACATaGTTTCGGAATTTGGTAGCA +
Preference number: 4 (lower is better)
Translates to: VHWFIIWISIYCATGKARSPSMT*FRNLVA
Trigger: TGCTACCAAATTCCGAAATCATGTCATGGAAGGAGA...TCTAGCCTTGCCCGTTGCGCAGTATATACTGATCCAGATGATAAACCAGTGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp GCACAGTTCTTCACAACCGATGGGGGAATAATTCAACATGGTGTCCAACAACGTTCTCCTTCCATGACATaGTTTCGGAATTTGGTAGCA +
Preference number: 4 (lower is better)
Translates to: AQFFTTDGGIIQHGVQQRSPSMT*FRNLVA
Trigger: TGCTACCAAATTCCGAAATCATGTCATGGAAGGAGA...ACGTTGTTGGACACCATGTTGAATTATTCCCCCATCGGTTGTGAAGAACTGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp TTCACTGGTTTATCATCTGGATCAGTATATACTGCGCAACGGGCAAGGCTAGAACTTACCACAATAGCATaGGGAGAATGCACTAAAGGC +
Preference number: 4 (lower is better)
Translates to: FTGLSSGSVYTAQRARLELTTIA*GECTKG
Trigger: GCCTTTAGTGCATTCTCCTCATGCTATTGTGGTAAG...TTCTAGCCTTGCCCGTTGCGCAGTATATACTGATCCAGATGATAAACCAGTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp ACAACCGATGGGGGAATAATTCAACATGGTGTCCAACAACGTTCTAACGACGTGGTCAAACTGTCTTCATaGGACTGGCTCATTTTTGTC +
Preference number: 4 (lower is better)
Translates to: TTDGGIIQHGVQQRSNDVVKLSS*DWLIFV
Trigger: GACAAAAATGAGCCAGTCTCATGAAGACAGTTTGAC...CACGTCGTTAGAACGTTGTTGGACACCATGTTGAATTATTCCCCCATCGGTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp ATCAGTATATACTGCGCAACGGGCAAGGCTAGAATCCATGAACCAAGCTGCAAAGTCAAACTGTCTTCATaGGACTGGCTCATTTTTGTC +
Preference number: 4 (lower is better)
Translates to: ISIYCATGKARIHEPSCKVKLSS*DWLIFV
Trigger: GACAAAAATGAGCCAGTCTCATGAAGACAGTTTGAC...TTTGCAGCTTGGTTCATGGATTCTAGCCTTGCCCGTTGCGCAGTATATACTGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp TCAACTGGTTACTATGAAGCAAGGTGTAAATGTTTGGCCCCAATCGGGCTTCAGGTCAAACTGTCTTCATaGGACTGGCTCATTTTTGTC +
Preference number: 4 (lower is better)
Translates to: STGYYEARCKCLAPIGLQVKLSS*DWLIFV
Trigger: GACAAAAATGAGCCAGTCTCATGAAGACAGTTTGAC...CTGAAGCCCGATTGGGGCCAAACATTTACACCTTGCTTCATAGTAACCAGTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp ATCTGGATCAGTATATACTGCGCAACGGGCAAGGCTAGAATCCATGAACCAAGCTTCAAGATCGGGTACTaGTGTTCCTTCAGGAATAAA +
Preference number: 4 (lower is better)
Translates to: IWISIYCATGKARIHEPSFKIGY*CSFRNK
Trigger: TTTATTCCTGAAGGAACATCAGTACCCGATCTTGAA...GCTTGGTTCATGGATTCTAGCCTTGCCCGTTGCGCAGTATATACTGATCCAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp AGTACCAGTATGTACAGGAAGCTGCCAGTTAAGACAGACCCGGAAAACAAACTCTTGATAAGAGTCTGCTaGCCACGATCTGTCATTTTC +
Preference number: 4 (lower is better)
Translates to: STSMYRKLPVKTDPENKLLIRVC*PRSVIF
Trigger: GAAAATGACAGATCGTGGTCAGCAGACTCTTATCAA...GAGTTTGTTTTCCGGGTCTGTCTTAACTGGCAGCTTCCTGTACATACTGGTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp TCTCAACTGGTTACTATGAAGCAAGGTGTAAATGTTTGGCCCCAATCGGGCTTCTTGATAAGAGTCTGCTaGCCACGATCTGTCATTTTC +
Preference number: 4 (lower is better)
Translates to: SQLVTMKQGVNVWPQSGFLIRVC*PRSVIF
Trigger: GAAAATGACAGATCGTGGTCAGCAGACTCTTATCAA...GAAGCCCGATTGGGGCCAAACATTTACACCTTGCTTCATAGTAACCAGTTGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp GTGTCCAACAACGTTCTAACGACGTGCTTCATCTCAACTGGTTACTATGAAGCATACAAAAACCAAAGCTaGAGCTTTGTCATCCCTCCC +
Preference number: 4 (lower is better)
Translates to: VSNNVLTTCFISTGYYEAYKNQS*SFVIPP
Trigger: GGGAGGGATGACAAAGCTTCAGCTTTGGTTTTTGTA...TGCTTCATAGTAACCAGTTGAGATGAAGCACGTCGTTAGAACGTTGTTGGACAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp GACATAGTTCACTGGTTTATCATCTGGATCAGTATATACTGCGCAACGGGCAAGTACAAAAACCAAAGCTaGAGCTTTGTCATCCCTCCC +
Preference number: 4 (lower is better)
Translates to: DIVHWFIIWISIYCATGKYKNQS*SFVIPP
Trigger: GGGAGGGATGACAAAGCTTCAGCTTTGGTTTTTGTA...CTTGCCCGTTGCGCAGTATATACTGATCCAGATGATAAACCAGTGAACTATGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp TCAGATATGGTTTCTGAAATGGAAGTAATGTGTTGGAGGGCAACCCAAAAGGACTATATTTACCCACTGTaGGGCAGAGGTGATAGGGTC +
Preference number: 4 (lower is better)
Translates to: SDMVSEMEVMCWRATQKDYIYPL*GRGDRV
Trigger: GACCCTATCACCTCTGCCTCACAGTGGGTAAATATA...GTCCTTTTGGGTTGCCCTCCAACACATTACTTCCATTTCAGAAACCATATCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000480676.2
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp ATGACGAGCATGTCTGTCCAGCTATCAATCATGTTTGTTTGCACCAAATCCCAACGACATCCTGACTCTTaGATGAGGAGATCAACAGTC +
Preference number: 4 (lower is better)
Translates to: MTSMSVQLSIMFVCTKSQRHPDS*MRRSTV
Trigger: GACTGTTGATCTCCTCATGCAAGAGTCAGGATGTCG...TTGGGATTTGGTGCAAACAAACATGATTGATAGCTGGACAGACATGCTCGTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp TCATCTGGATCAGTATATACTGCGCAACGGGCAAGGCTAGAATCCATGAACCAATCTAGGTACTTCTGCTaGAGCAGCAAAAACTTCATC +
Preference number: 4 (lower is better)
Translates to: SSGSVYTAQRARLESMNQSRYFC*SSKNFI
Trigger: GATGAAGTTTTTGCTGCTGCAGCAGAAGTACCTAGA...TTGGTTCATGGATTCTAGCCTTGCCCGTTGCGCAGTATATACTGATCCAGATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp TTCCAAAGTGGTTGTATCGCTGATTCCTACTCTTTTGCTAGATCACACCAAAATGTGCCTCCAGGACCTTaGCATCCTCCAGGTATTCTA +
Preference number: 4 (lower is better)
Translates to: FQSGCIADSYSFARSHQNVPPGP*HPPGIL
Trigger: TAGAATACCTGGAGGATGGCAAGGTCCTGGAGGCAC...ATTTTGGTGTGATCTAGCAAAAGAGTAGGAATCAGCGATACAACCACTTTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp AATGGAAGTAATGTGTTGGAGGGCAACCCAAAAGGACAGTTGCGAAATTATGAAGGGAAGCTGTCCCTTTaGCTTCCCATTCTGCTTTTG +
Preference number: 4 (lower is better)
Translates to: NGSNVLEGNPKGQLRNYEGKLSL*LPILLL
Trigger: CAAAAGCAGAATGGGAAGGCAAAGGGACAGCTTCCC...TTCATAATTTCGCAACTGTCCTTTTGGGTTGCCCTCCAACACATTACTTCCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp CCAAGCTGCAAAGATCTCAAGCTAAATAAGGCGGAAAGATTTGGAGAAACAAAATGTAGTTCCACCGCCTaGCGCAGGAGAGTCTGTAAA +
Preference number: 4 (lower is better)
Translates to: PSCKDLKLNKAERFGETKCSSTA*RRRVCK
Trigger: TTTACAGACTCTCCTGCGGCAGGCGGTGGAACTACA...TTTTGTTTCTCCAAATCTTTCCGCCTTATTTAGCTTGAGATCTTTGCAGCTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp TTGTTAGTATCTTGTGGCTGGCTTCATAGTATAAGACTCACTCTTAAGCCTACTTGTAGTTCCACCGCCTaGCGCAGGAGAGTCTGTAAA +
Preference number: 4 (lower is better)
Translates to: LLVSCGWLHSIRLTLKPTCSSTA*RRRVCK
Trigger: TTTACAGACTCTCCTGCGGCAGGCGGTGGAACTACA...AGTAGGCTTAAGAGTGAGTCTTATACTATGAAGCCAGCCACAAGATACTAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp AAAGGCATTGCACTCTTACCCCTTCCCAGGAGTCAAGGAGATTACCATCTAAGTCACACTTCATTACAATaGTCCGTAAGTATCTGCTGC +
Preference number: 4 (lower is better)
Translates to: KGIALLPLPRSQGDYHLSHTSLQ*SVSICC
Trigger: GCAGCAGATACTTACGGAGCATTGTAATGAAGTGTG...ACTTAGATGGTAATCTCCTTGACTCCTGGGAAGGGGTAAGAGTGCAATGCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486652.5
CDS-3UTR GCA 90 bp GTTCACTGGTTTATCATCTGGATCAGTATATACTGCGCAACGGGCAAGGCTAGACACACTTCATTACAATaGTCCGTAAGTATCTGCTGC +
Preference number: 4 (lower is better)
Translates to: VHWFIIWISIYCATGKARHTSLQ*SVSICC
Trigger: GCAGCAGATACTTACGGAGCATTGTAATGAAGTGTG...TCTAGCCTTGCCCGTTGCGCAGTATATACTGATCCAGATGATAAACCAGTGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp CCTTCCCATTCTGCTTTTGCACGTAGGTCTTCTGCATGGCTACACATCAGATACGTCATCTGGACTCCATaGAATATAAGAAACGCCATA +
Preference number: 4 (lower is better)
Translates to: PSHSAFARRSSAWLHIRYVIWTP*NIRNAI
Trigger: TATGGCGTTTCTTATATTGCATGGAGTCCAGATGAC...GTATCTGATGTGTAGCCATGCAGAAGACCTACGTGCAAAAGCAGAATGGGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486652.5
CDS-3UTR GCA 90 bp GTGCACGAGACTTTCAGTAAAAATGACAAGATCCTAGAACAGCTGTTTCCAGGATTTACTGTACGTGTGTaGCCTGTCAGCTCCGCAATT +
Preference number: 4 (lower is better)
Translates to: VHETFSKNDKILEQLFPGFTVRV*PVSSAI
Trigger: AATTGCGGAGCTGACAGGGCACACACGTACAGTAAA...TCCTGGAAACAGCTGTTCTAGGATCTTGTCATTTTTACTGAAAGTCTCGTGCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000480676.2
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp GCACAGTTCTTCACAACCGATGGGGGAATAATTCAACATGGTGTCCAACAACGTGTGGTCTATAAAAGGTaGTGGTCCCCATATTCTAAC +
Preference number: 4 (lower is better)
Translates to: AQFFTTDGGIIQHGVQQRVVYKR*WSPYSN
Trigger: GTTAGAATATGGGGACCAGCACCTTTTATAGACCAC...ACGTTGTTGGACACCATGTTGAATTATTCCCCCATCGGTTGTGAAGAACTGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp TACACAGAAGAGCAACAAGAATGGTATCCTGCCAGACAAAAGACAGGAAGGAAATGGATCAGTATATACTaGGCAACGGGCAAGGCTAGA +
Preference number: 4 (lower is better)
Translates to: YTEEQQEWYPARQKTGRKWISIY*ATGKAR
Trigger: TCTAGCCTTGCCCGTTGCGCAGTATATACTGATCCA...TTTCCTTCCTGTCTTTTGTCTGGCAGGATACCATTCTTGTTGCTCTTCTGTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp GACTTGGCTACACCTAAAGGGGAACTTAGTACAAGACTTTTTCTTCACCAGAATGTATGTACAGGAAGCTaGCAGTTAAGACAGACCCGG +
Preference number: 4 (lower is better)
Translates to: DLATPKGELSTRLFLHQNVCTGS*QLRQTR
Trigger: CCGGGTCTGTCTTAACTGGCAGCTTCCTGTACATAC...ATTCTGGTGAAGAAAAAGTCTTGTACTAAGTTCCCCTTTAGGTGTAGCCAAGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp GACATAGTTCACTGGTTTATCATCTGGATCAGTATATACTGCGCAACGGGCAAGAAACGACTGGTTAAGTaGTGCGCACTGACATGGAAA +
Preference number: 4 (lower is better)
Translates to: DIVHWFIIWISIYCATGKKRLVK*CALTWK
Trigger: TTTCCATGTCAGTGCGCAGCACTTAACCAGTCGTTT...CTTGCCCGTTGCGCAGTATATACTGATCCAGATGATAAACCAGTGAACTATGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp CTGAATGTAGCACAGTTCTTCACAACCGATGGGGGAATAATTCAACATGGTGTCAAACGACTGGTTAAGTaGTGCGCACTGACATGGAAA +
Preference number: 4 (lower is better)
Translates to: LNVAQFFTTDGGIIQHGVKRLVK*CALTWK
Trigger: TTTCCATGTCAGTGCGCAGCACTTAACCAGTCGTTT...GACACCATGTTGAATTATTCCCCCATCGGTTGTGAAGAACTGTGCTACATTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp TACTGCGCAACGGGCAAGGCTAGAATCCATGAACCAAGCTGCAAAGATCTCAAGAAACACGGTCTTCCTTaGTTCTTTTCCCAATCAATA +
Preference number: 4 (lower is better)
Translates to: YCATGKARIHEPSCKDLKKHGLP*FFSQSI
Trigger: TATTGATTGGGAAAAGAAGCAAGGAAGACCGTGTTT...CTTGAGATCTTTGCAGCTTGGTTCATGGATTCTAGCCTTGCCCGTTGCGCAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486652.5
CDS-3UTR GCA 90 bp GTGTCCAACAACGTTCTAACGACGTGCTTCATCTCAACTGGTTACTATGAAGCAAACTATCCATGCTACTaGATTCCTCTTCACTGCCAC +
Preference number: 4 (lower is better)
Translates to: VSNNVLTTCFISTGYYEANYPCY*IPLHCH
Trigger: GTGGCAGTGAAGAGGAATGCAGTAGCATGGATAGTT...TGCTTCATAGTAACCAGTTGAGATGAAGCACGTCGTTAGAACGTTGTTGGACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678555.1
CDS-3UTR GCA 90 bp GTTCACTGGTTTATCATCTGGATCAGTATATACTGCGCAACGGGCAAGGCTAGAACCATCAACTATCCATaGTACTGCATTCCTCTTCAC +
Preference number: 4 (lower is better)
Translates to: VHWFIIWISIYCATGKARTINYP*YCIPLH
Trigger: GTGAAGAGGAATGCAGTAGCATGGATAGTTGATGGT...TCTAGCCTTGCCCGTTGCGCAGTATATACTGATCCAGATGATAAACCAGTGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678555.1
CDS-3UTR CCA 90 bp TCTGAAATGGAAGTAATGTGTTGGAGGGCAACCCAAAAGGACAGTTGCGAAATTCGTAGGTCTTCTGCATaGCTACACATCAGATACCCA +
Preference number: 4 (lower is better)
Translates to: SEMEVMCWRATQKDSCEIRRSSA*LHIRYP
Trigger: TGGGTATCTGATGTGTAGCCATGCAGAAGACCTACG...AATTTCGCAACTGTCCTTTTGGGTTGCCCTCCAACACATTACTTCCATTTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp TACACAGAAGAGCAACAAGAATGGTATCCTGCCAGACAAAAGACAGGAAGGAAACGTAGGTCTTCTGCATaGCTACACATCAGATACCCA +
Preference number: 4 (lower is better)
Translates to: YTEEQQEWYPARQKTGRKRRSSA*LHIRYP
Trigger: TGGGTATCTGATGTGTAGCCATGCAGAAGACCTACG...TTTCCTTCCTGTCTTTTGTCTGGCAGGATACCATTCTTGTTGCTCTTCTGTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp GTGCACGAGACTTTCAGTAAAAATGACAAGATCCTAGAACAGCTGTTTCCAGGACATGGATGGAATCTGTaGGTTCCAGCTCACACAGTT +
Preference number: 4 (lower is better)
Translates to: VHETFSKNDKILEQLFPGHGWNL*VPAHTV
Trigger: AACTGTGTGAGCTGGAACCCACAGATTCCATCCATG...TCCTGGAAACAGCTGTTCTAGGATCTTGTCATTTTTACTGAAAGTCTCGTGCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000480676.2
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp ATGACGAGCATGTCTGTCCAGCTATCAATCATGTTTGTTTGCACCAAATCCCAACATGGATGGAATCTGTaGGTTCCAGCTCACACAGTT +
Preference number: 4 (lower is better)
Translates to: MTSMSVQLSIMFVCTKSQHGWNL*VPAHTV
Trigger: AACTGTGTGAGCTGGAACCCACAGATTCCATCCATG...TTGGGATTTGGTGCAAACAAACATGATTGATAGCTGGACAGACATGCTCGTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp TGTATCGCTGATTCCTACTCTTTTGCTAGATCACACCAAAATTACTTCCTAAGTAGGCGCTGGCCATCATaGATGGAATCTGTGGGTTCC +
Preference number: 4 (lower is better)
Translates to: CIADSYSFARSHQNYFLSRRWPS*MESVGS
Trigger: GGAACCCACAGATTCCATCCATGATGGCCAGCGCCT...ACTTAGGAAGTAATTTTGGTGTGATCTAGCAAAAGAGTAGGAATCAGCGATACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp ACTAACCTGATTTTTGGAGCCCAAATTCTCCACTCTATTTTGATCTATGTGCAAAGGCGCTGGCCATCATaGATGGAATCTGTGGGTTCC +
Preference number: 4 (lower is better)
Translates to: TNLIFGAQILHSILIYVQRRWPS*MESVGS
Trigger: GGAACCCACAGATTCCATCCATGATGGCCAGCGCCT...TTGCACATAGATCAAAATAGAGTGGAGAATTTGGGCTCCAAAAATCAGGTTAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp ATCTGGATCAGTATATACTGCGCAACGGGCAAGGCTAGAATCCATGAACCAAGCGTCTATAAAAGGTGCTaGTCCCCATATTCTAACAGT +
Preference number: 4 (lower is better)
Translates to: IWISIYCATGKARIHEPSVYKRC*SPYSNS
Trigger: ACTGTTAGAATATGGGGACCAGCACCTTTTATAGAC...GCTTGGTTCATGGATTCTAGCCTTGCCCGTTGCGCAGTATATACTGATCCAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp TACACAGAAGAGCAACAAGAATGGTATCCTGCCAGACAAAAGACAGGAAGGAAACAAGGTGTAAATGTTTaGCCCCAATCGGGCTTCAGA +
Preference number: 4 (lower is better)
Translates to: YTEEQQEWYPARQKTGRKQGVNV*PQSGFR
Trigger: TCTGAAGCCCGATTGGGGCCAAACATTTACACCTTG...TTTCCTTCCTGTCTTTTGTCTGGCAGGATACCATTCTTGTTGCTCTTCTGTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp TCAACTGGTTACTATGAAGCAAGGTGTAAATGTTTGGCCCCAATCGGGCTTCAGGTTCTTCACAACCGATaGGGGAATAATTCAACATGG +
Preference number: 4 (lower is better)
Translates to: STGYYEARCKCLAPIGLQVLHNR*GNNSTW
Trigger: CCATGTTGAATTATTCCCCCATCGGTTGTGAAGAAC...CTGAAGCCCGATTGGGGCCAAACATTTACACCTTGCTTCATAGTAACCAGTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp TCAACTGGTTACTATGAAGCAAGGTGTAAATGTTTGGCCCCAATCGGGCTTCAGGAAGAGCAACAAGAATaGTATCCTGCCAGACAAAAG +
Preference number: 4 (lower is better)
Translates to: STGYYEARCKCLAPIGLQEEQQE*YPARQK
Trigger: CTTTTGTCTGGCAGGATACCATTCTTGTTGCTCTTC...CTGAAGCCCGATTGGGGCCAAACATTTACACCTTGCTTCATAGTAACCAGTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp TCTCAACTGGTTACTATGAAGCAAGGTGTAAATGTTTGGCCCCAATCGGGCTTCTCTCATTCCAACAGCTaGAGTCACCCTATTTATCCT +
Preference number: 4 (lower is better)
Translates to: SQLVTMKQGVNVWPQSGFSHSNS*SHPIYP
Trigger: AGGATAAATAGGGTGACTCCAGCTGTTGGAATGAGA...GAAGCCCGATTGGGGCCAAACATTTACACCTTGCTTCATAGTAACCAGTTGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp ACAACCGATGGGGGAATAATTCAACATGGTGTCCAACAACGTTCTAACGACGTGGCCCTCTTCTCTTTGTaGATTCTGGAGTCTATTCAT +
Preference number: 4 (lower is better)
Translates to: TTDGGIIQHGVQQRSNDVALFSL*ILESIH
Trigger: ATGAATAGACTCCAGAATCCACAAAGAGAAGAGGGC...CACGTCGTTAGAACGTTGTTGGACACCATGTTGAATTATTCCCCCATCGGTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp TGTAGCACAGTTCTTCACAACCGATGGGGGAATAATTCAACATGGTGTCCAACAATGGAAGTAATGTGTTaGAGGGCAACCCAAAAGGAC +
Preference number: 4 (lower is better)
Translates to: CSTVLHNRWGNNSTWCPTMEVMC*RATQKD
Trigger: GTCCTTTTGGGTTGCCCTCCAACACATTACTTCCAT...TGTTGGACACCATGTTGAATTATTCCCCCATCGGTTGTGAAGAACTGTGCTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp CTGAATGTAGCACAGTTCTTCACAACCGATGGGGGAATAATTCAACATGGTGTCACATACATGCTTTTGTaGATCTATTCCCCTCGCCAC +
Preference number: 4 (lower is better)
Translates to: LNVAQFFTTDGGIIQHGVTYMLL*IYSPRH
Trigger: GTGGCGAGGGGAATAGATCCACAAAAGCATGTATGT...GACACCATGTTGAATTATTCCCCCATCGGTTGTGAAGAACTGTGCTACATTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
3UTR CAA 72 bp AGTTTATCCAATAGTTTAGATCGGGAAGCTGTCCCTTaGCCTTCCCATTCTGCTTTTGCACGTAGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: SLSNSLDREAVP*PSHSAFARRSS
Trigger: AGAAGACCTACGTGCAAAAGCAGAATGGGAAGGCAAAGGGACAGCTTCCCGATCTAAACTATTGGATAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486652.5
CDS-3UTR TCA 90 bp AAATATACCAGTATTAACCAAACCTTAAACTCAGAGGGCACTTCACATGTGCACAATGACATCCTCATCTaGCTGGGAGAGCCGCTTCTT +
Preference number: 4 (lower is better)
Translates to: KYTSINQTLNSEGTSHVHNDILI*LGEPLL
Trigger: AAGAAGCGGCTCTCCCAGTCAGATGAGGATGTCATT...GTGCACATGTGAAGTGCCCTCTGAGTTTAAGGTTTGGTTAATACTGGTATATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp GAACCAAGCTGCAAAGATCTCAAGCTAAATAAGGCGGAAAGATTTGGAGAAACAATCCTGACTCTTGCATaGGGAGATCAACAGTCTGGT +
Preference number: 4 (lower is better)
Translates to: EPSCKDLKLNKAERFGETILTLA*GDQQSG
Trigger: ACCAGACTGTTGATCTCCTCATGCAAGAGTCAGGAT...TGTTTCTCCAAATCTTTCCGCCTTATTTAGCTTGAGATCTTTGCAGCTTGGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp TTCATTACAATGCTCCGTAAGTATCTGCTGCGTATAACATGGGAACTGCCTCCTTCTCCTTCCATGACATaGTTTCGGAATTTGGTAGCA +
Preference number: 4 (lower is better)
Translates to: FITMLRKYLLRITWELPPSPSMT*FRNLVA
Trigger: TGCTACCAAATTCCGAAATCATGTCATGGAAGGAGA...AGGAGGCAGTTCCCATGTTATACGCAGCAGATACTTACGGAGCATTGTAATGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486652.5
CDS-3UTR TCA 90 bp CTCTCTCTCACACACACACAGAACACACACACACATTTTTATACTATTGGTTTTTCACAGCGTAGAACTTaGAGTGCCTCCAGGACCTTG +
Preference number: 4 (lower is better)
Translates to: LSLTHTQNTHTHFYTIGFSQRRT*SASRTL
Trigger: CAAGGTCCTGGAGGCACTTCAAGTTCTACGCTGTGA...AAAACCAATAGTATAAAAATGTGTGTGTGTGTTCTGTGTGTGTGTGAGAGAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp GTTACTATGAAGCAAGGTGTAAATGTTTGGCCCCAATCGGGCTTCAGAAATGGTTCAAGTTTGGTATTGTaGTATAGGCACCGATCCCTT +
Preference number: 4 (lower is better)
Translates to: VTMKQGVNVWPQSGFRNGSSLVL*YRHRSL
Trigger: AAGGGATCGGTGCCTATATCACAATACCAAACTTGA...ACCATTTCTGAAGCCCGATTGGGGCCAAACATTTACACCTTGCTTCATAGTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp GTGGATCTATTCCCCTCGCCACACACACACATTTTCAAGGAGCCAATAACATTTTCAAGTTTGGTATTGTaGTATAGGCACCGATCCCTT +
Preference number: 4 (lower is better)
Translates to: VDLFPSPHTHIFKEPITFSSLVL*YRHRSL
Trigger: AAGGGATCGGTGCCTATATCACAATACCAAACTTGA...AAATGTTATTGGCTCCTTGAAAATGTGTGTGTGTGGCGAGGGGAATAGATCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp AGCATGTCTGTCCAGCTATCAATCATGTTTGTTTGCACCAAATCCCAAGCCATTTCCAAGCACTGTTTCTaGCCATGTCTCATGTGGTAT +
Preference number: 4 (lower is better)
Translates to: SMSVQLSIMFVCTKSQAISKHCF*PCLMWY
Trigger: ATACCACATGAGACATGGTCAGAAACAGTGCTTGGA...AATGGCTTGGGATTTGGTGCAAACAAACATGATTGATAGCTGGACAGACATGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp GTGTCCAACAACGTTCTAACGACGTGCTTCATCTCAACTGGTTACTATGAAGCAATGAGCCTACTAACCTaGTTTTTGGAGCCCAAATTC +
Preference number: 4 (lower is better)
Translates to: VSNNVLTTCFISTGYYEAMSLLT*FLEPKF
Trigger: GAATTTGGGCTCCAAAAATCAGGTTAGTAGGCTCAT...TGCTTCATAGTAACCAGTTGAGATGAAGCACGTCGTTAGAACGTTGTTGGACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp GTTACTATGAAGCAAGGTGTAAATGTTTGGCCCCAATCGGGCTTCAGAAATGGTATGAGCCTACTAACCTaGTTTTTGGAGCCCAAATTC +
Preference number: 4 (lower is better)
Translates to: VTMKQGVNVWPQSGFRNGMSLLT*FLEPKF
Trigger: GAATTTGGGCTCCAAAAATCAGGTTAGTAGGCTCAT...ACCATTTCTGAAGCCCGATTGGGGCCAAACATTTACACCTTGCTTCATAGTAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp GACATAGTTCACTGGTTTATCATCTGGATCAGTATATACTGCGCAACGGGCAAGTTAAGTGCTGCGCACTaGCATGGAAAAAGTGTCTTT +
Preference number: 4 (lower is better)
Translates to: DIVHWFIIWISIYCATGKLSAAH*HGKSVF
Trigger: AAAGACACTTTTTCCATGTCAGTGCGCAGCACTTAA...CTTGCCCGTTGCGCAGTATATACTGATCCAGATGATAAACCAGTGAACTATGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp GTTACTATGAAGCAAGGTGTAAATGTTTGGCCCCAATCGGGCTTCAGAAATGGTTTAAGTGCTGCGCACTaGCATGGAAAAAGTGTCTTT +
Preference number: 4 (lower is better)
Translates to: VTMKQGVNVWPQSGFRNGLSAAH*HGKSVF
Trigger: AAAGACACTTTTTCCATGTCAGTGCGCAGCACTTAA...ACCATTTCTGAAGCCCGATTGGGGCCAAACATTTACACCTTGCTTCATAGTAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp CTGGATTCCAAGCCACACTTGTCAAACTGTCTTCATGAGACTGGCTCATTTTTGCCTTTAAGTGTATCTTaGAACACGGTCTTCCTTGCT +
Preference number: 4 (lower is better)
Translates to: LDSKPHLSNCLHETGSFLPLSVS*NTVFLA
Trigger: AGCAAGGAAGACCGTGTTTCAAGATACACTTAAAGG...CAAAAATGAGCCAGTCTCATGAAGACAGTTTGACAAGTGTGGCTTGGAATCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486652.5
CDS-3UTR GCA 90 bp TGTAGCACAGTTCTTCACAACCGATGGGGGAATAATTCAACATGGTGTCCAACACCTAAGCCATTCAAGTaGTGTCCTATTAGCCTAATG +
Preference number: 4 (lower is better)
Translates to: CSTVLHNRWGNNSTWCPTPKPFK*CPISLM
Trigger: CATTAGGCTAATAGGACAGCACTTGAATGGCTTAGG...TGTTGGACACCATGTTGAATTATTCCCCCATCGGTTGTGAAGAACTGTGCTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp AAGCCTGAATGTAGCACAGTTCTTCACAACCGATGGGGGAATAATTCAACATGGCCTAAGCCATTCAAGTaGTGTCCTATTAGCCTAATG +
Preference number: 4 (lower is better)
Translates to: KPECSTVLHNRWGNNSTWPKPFK*CPISLM
Trigger: CATTAGGCTAATAGGACAGCACTTGAATGGCTTAGG...CCATGTTGAATTATTCCCCCATCGGTTGTGAAGAACTGTGCTACATTCAGGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp TTTCATGACGAGCATGTCTGTCCAGCTATCAATCATGTTTGTTTGCACCAAATCCGACATCCTGACTCTTaGATGAGGAGATCAACAGTC +
Preference number: 4 (lower is better)
Translates to: FHDEHVCPAINHVCLHQIRHPDS*MRRSTV
Trigger: GACTGTTGATCTCCTCATGCAAGAGTCAGGATGTCG...GATTTGGTGCAAACAAACATGATTGATAGCTGGACAGACATGCTCGTCATGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp GTTACTATGAAGCAAGGTGTAAATGTTTGGCCCCAATCGGGCTTCAGAAATGGTTCTAGGTACTTCTGCTaGAGCAGCAAAAACTTCATC +
Preference number: 4 (lower is better)
Translates to: VTMKQGVNVWPQSGFRNGSRYFC*SSKNFI
Trigger: GATGAAGTTTTTGCTGCTGCAGCAGAAGTACCTAGA...ACCATTTCTGAAGCCCGATTGGGGCCAAACATTTACACCTTGCTTCATAGTAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp AGTACCAGTATGTACAGGAAGCTGCCAGTTAAGACAGACCCGGAAAACAAACTCTATTCTAGGTACTTCTaGTGCAGCAGCAAAAACTTC +
Preference number: 4 (lower is better)
Translates to: STSMYRKLPVKTDPENKLYSRYF*CSSKNF
Trigger: GAAGTTTTTGCTGCTGCAGCAGAAGTACCTAGAATA...GAGTTTGTTTTCCGGGTCTGTCTTAACTGGCAGCTTCCTGTACATACTGGTACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp TTCCAAAGTGGTTGTATCGCTGATTCCTACTCTTTTGCTAGATCACACCAAAATGGGAAGCTGTCCCTTTaGCTTCCCATTCTGCTTTTG +
Preference number: 4 (lower is better)
Translates to: FQSGCIADSYSFARSHQNGKLSL*LPILLL
Trigger: CAAAAGCAGAATGGGAAGGCAAAGGGACAGCTTCCC...ATTTTGGTGTGATCTAGCAAAAGAGTAGGAATCAGCGATACAACCACTTTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp GTTACTATGAAGCAAGGTGTAAATGTTTGGCCCCAATCGGGCTTCAGAAATGGTCACACTTCATTACAATaGTCCGTAAGTATCTGCTGC +
Preference number: 4 (lower is better)
Translates to: VTMKQGVNVWPQSGFRNGHTSLQ*SVSICC
Trigger: GCAGCAGATACTTACGGAGCATTGTAATGAAGTGTG...ACCATTTCTGAAGCCCGATTGGGGCCAAACATTTACACCTTGCTTCATAGTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp GTGTCCAACAACGTTCTAACGACGTGCTTCATCTCAACTGGTTACTATGAAGCACACACTTCATTACAATaGTCCGTAAGTATCTGCTGC +
Preference number: 4 (lower is better)
Translates to: VSNNVLTTCFISTGYYEAHTSLQ*SVSICC
Trigger: GCAGCAGATACTTACGGAGCATTGTAATGAAGTGTG...TGCTTCATAGTAACCAGTTGAGATGAAGCACGTCGTTAGAACGTTGTTGGACAC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp GTTCACTGGTTTATCATCTGGATCAGTATATACTGCGCAACGGGCAAGGCTAGAGTCATCTGGACTCCATaGAATATAAGAAACGCCATA +
Preference number: 4 (lower is better)
Translates to: VHWFIIWISIYCATGKARVIWTP*NIRNAI
Trigger: TATGGCGTTTCTTATATTGCATGGAGTCCAGATGAC...TCTAGCCTTGCCCGTTGCGCAGTATATACTGATCCAGATGATAAACCAGTGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp AAATATACCAGTATTAACCAAACCTTAAACTCAGAGGGCACTTCACATGTGCACAAGCACCAAAGGCATTaGACTCTTACCCCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: KYTSINQTLNSEGTSHVHKHQRH*TLTPSQ
Trigger: CTGGGAAGGGGTAAGAGTGCAATGCCTTTGGTGCTT...GTGCACATGTGAAGTGCCCTCTGAGTTTAAGGTTTGGTTAATACTGGTATATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000480676.2
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp TTAAGACAGACCCGGAAAACAAACTCACCTAGCTGCTATAGAAACCTTTGCATATTTACTGTACGTGTGTaGCCTGTCAGCTCCGCAATT +
Preference number: 4 (lower is better)
Translates to: LRQTRKTNSPSCYRNLCIFTVRV*PVSSAI
Trigger: AATTGCGGAGCTGACAGGGCACACACGTACAGTAAA...TATGCAAAGGTTTCTATAGCAGCTAGGTGAGTTTGTTTTCCGGGTCTGTCTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp GACTTGGCTACACCTAAAGGGGAACTTAGTACAAGACTTTTTCTTCACCAGAATTTTACTGTACGTGTGTaGCCTGTCAGCTCCGCAATT +
Preference number: 4 (lower is better)
Translates to: DLATPKGELSTRLFLHQNFTVRV*PVSSAI
Trigger: AATTGCGGAGCTGACAGGGCACACACGTACAGTAAA...ATTCTGGTGAAGAAAAAGTCTTGTACTAAGTTCCCCTTTAGGTGTAGCCAAGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp TTCACTGGTTTATCATCTGGATCAGTATATACTGCGCAACGGGCAAGGCTAGAAGTGGTCTATAAAAGGTaGTGGTCCCCATATTCTAAC +
Preference number: 4 (lower is better)
Translates to: FTGLSSGSVYTAQRARLEVVYKR*WSPYSN
Trigger: GTTAGAATATGGGGACCAGCACCTTTTATAGACCAC...TTCTAGCCTTGCCCGTTGCGCAGTATATACTGATCCAGATGATAAACCAGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp CCTTCCCATTCTGCTTTTGCACGTAGGTCTTCTGCATGGCTACACATCAGATACTCAATCATGTTTGTTTaGACCAAATCCCAAGCCATT +
Preference number: 4 (lower is better)
Translates to: PSHSAFARRSSAWLHIRYSIMFV*TKSQAI
Trigger: AATGGCTTGGGATTTGGTGCAAACAAACATGATTGA...GTATCTGATGTGTAGCCATGCAGAAGACCTACGTGCAAAAGCAGAATGGGAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486652.5
CDS-3UTR GCA 90 bp TGTAGCACAGTTCTTCACAACCGATGGGGGAATAATTCAACATGGTGTCCAACAAACGTTCTAACGACGTaGTTCATCTCAACTGGTTAC +
Preference number: 4 (lower is better)
Translates to: CSTVLHNRWGNNSTWCPTNVLTT*FISTGY
Trigger: GTAACCAGTTGAGATGAAGCACGTCGTTAGAACGTT...TGTTGGACACCATGTTGAATTATTCCCCCATCGGTTGTGAAGAACTGTGCTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp GTTACTATGAAGCAAGGTGTAAATGTTTGGCCCCAATCGGGCTTCAGAAATGGTAACGTTCTAACGACGTaGTTCATCTCAACTGGTTAC +
Preference number: 4 (lower is better)
Translates to: VTMKQGVNVWPQSGFRNGNVLTT*FISTGY
Trigger: GTAACCAGTTGAGATGAAGCACGTCGTTAGAACGTT...ACCATTTCTGAAGCCCGATTGGGGCCAAACATTTACACCTTGCTTCATAGTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp TTCACTGGTTTATCATCTGGATCAGTATATACTGCGCAACGGGCAAGGCTAGAAAACGTTCTAACGACGTaGTTCATCTCAACTGGTTAC +
Preference number: 4 (lower is better)
Translates to: FTGLSSGSVYTAQRARLENVLTT*FISTGY
Trigger: GTAACCAGTTGAGATGAAGCACGTCGTTAGAACGTT...TTCTAGCCTTGCCCGTTGCGCAGTATATACTGATCCAGATGATAAACCAGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp GTGTCCAACAACGTTCTAACGACGTGCTTCATCTCAACTGGTTACTATGAAGCAACAAGAATGGTATCCTaGCAGACAAAAGACAGGAAG +
Preference number: 4 (lower is better)
Translates to: VSNNVLTTCFISTGYYEATRMVS*QTKDRK
Trigger: CTTCCTGTCTTTTGTCTGGCAGGATACCATTCTTGT...TGCTTCATAGTAACCAGTTGAGATGAAGCACGTCGTTAGAACGTTGTTGGACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp CTGAATGTAGCACAGTTCTTCACAACCGATGGGGGAATAATTCAACATGGTGTCCTAAGTGGTGGTCTCTaGAAAATGGAGCTTGAAGAA +
Preference number: 4 (lower is better)
Translates to: LNVAQFFTTDGGIIQHGVLSGGL*KMELEE
Trigger: TTCTTCAAGCTCCATTTTGCAGAGACCACCACTTAG...GACACCATGTTGAATTATTCCCCCATCGGTTGTGAAGAACTGTGCTACATTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp GTTACTATGAAGCAAGGTGTAAATGTTTGGCCCCAATCGGGCTTCAGAAATGGTTCTGAGTGTTACAAATaGACCGTAGCACACTGTAAC +
Preference number: 4 (lower is better)
Translates to: VTMKQGVNVWPQSGFRNGSECYK*TVAHCN
Trigger: GTTACAGTGTGCTACGGTGCATTTGTAACACTCAGA...ACCATTTCTGAAGCCCGATTGGGGCCAAACATTTACACCTTGCTTCATAGTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp TCATCTGGATCAGTATATACTGCGCAACGGGCAAGGCTAGAATCCATGAACCAACTCCTACTACAAACATaGTCTATAAGCAGAGACACA +
Preference number: 4 (lower is better)
Translates to: SSGSVYTAQRARLESMNQLLLQT*SISRDT
Trigger: TGTGTCTCTGCTTATAGACCATGTTTGTAGTAGGAG...TTGGTTCATGGATTCTAGCCTTGCCCGTTGCGCAGTATATACTGATCCAGATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp GAACCAAGCTGCAAAGATCTCAAGCTAAATAAGGCGGAAAGATTTGGAGAAACACTGCTGCGTATAACATaGGAACTGCCTCCTACTACA +
Preference number: 4 (lower is better)
Translates to: EPSCKDLKLNKAERFGETLLRIT*ELPPTT
Trigger: TGTAGTAGGAGGCAGTTCCCATGTTATACGCAGCAG...TGTTTCTCCAAATCTTTCCGCCTTATTTAGCTTGAGATCTTTGCAGCTTGGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp TTTCATGACGAGCATGTCTGTCCAGCTATCAATCATGTTTGTTTGCACCAAATCCTGCTGCGTATAACATaGGAACTGCCTCCTACTACA +
Preference number: 4 (lower is better)
Translates to: FHDEHVCPAINHVCLHQILLRIT*ELPPTT
Trigger: TGTAGTAGGAGGCAGTTCCCATGTTATACGCAGCAG...GATTTGGTGCAAACAAACATGATTGATAGCTGGACAGACATGCTCGTCATGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp AATGGAAGTAATGTGTTGGAGGGCAACCCAAAAGGACAGTTGCGAAATTATGAAAAAGCGCTTCCCATCTaGATTCCAAGCCACACTTGT +
Preference number: 4 (lower is better)
Translates to: NGSNVLEGNPKGQLRNYEKALPI*IPSHTC
Trigger: ACAAGTGTGGCTTGGAATCCAGATGGGAAGCGCTTT...TTCATAATTTCGCAACTGTCCTTTTGGGTTGCCCTCCAACACATTACTTCCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000480676.2
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp TTTCATGACGAGCATGTCTGTCCAGCTATCAATCATGTTTGTTTGCACCAAATCAAAGCGCTTCCCATCTaGATTCCAAGCCACACTTGT +
Preference number: 4 (lower is better)
Translates to: FHDEHVCPAINHVCLHQIKALPI*IPSHTC
Trigger: ACAAGTGTGGCTTGGAATCCAGATGGGAAGCGCTTT...GATTTGGTGCAAACAAACATGATTGATAGCTGGACAGACATGCTCGTCATGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp GAACCAAGCTGCAAAGATCTCAAGCTAAATAAGGCGGAAAGATTTGGAGAAACACATGGATGGAATCTGTaGGTTCCAGCTCACACAGTT +
Preference number: 4 (lower is better)
Translates to: EPSCKDLKLNKAERFGETHGWNL*VPAHTV
Trigger: AACTGTGTGAGCTGGAACCCACAGATTCCATCCATG...TGTTTCTCCAAATCTTTCCGCCTTATTTAGCTTGAGATCTTTGCAGCTTGGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp GCACAGTTCTTCACAACCGATGGGGGAATAATTCAACATGGTGTCCAACAACGTGTCTATAAAAGGTGCTaGTCCCCATATTCTAACAGT +
Preference number: 4 (lower is better)
Translates to: AQFFTTDGGIIQHGVQQRVYKRC*SPYSNS
Trigger: ACTGTTAGAATATGGGGACCAGCACCTTTTATAGAC...ACGTTGTTGGACACCATGTTGAATTATTCCCCCATCGGTTGTGAAGAACTGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp GTTCACTGGTTTATCATCTGGATCAGTATATACTGCGCAACGGGCAAGGCTAGAGTCTATAAAAGGTGCTaGTCCCCATATTCTAACAGT +
Preference number: 4 (lower is better)
Translates to: VHWFIIWISIYCATGKARVYKRC*SPYSNS
Trigger: ACTGTTAGAATATGGGGACCAGCACCTTTTATAGAC...TCTAGCCTTGCCCGTTGCGCAGTATATACTGATCCAGATGATAAACCAGTGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp ATCTGGATCAGTATATACTGCGCAACGGGCAAGGCTAGAATCCATGAACCAAGCTCCTCTTCAATATTCTaGTGGTCTATAAAAGGTGCT +
Preference number: 4 (lower is better)
Translates to: IWISIYCATGKARIHEPSSSSIF*WSIKGA
Trigger: AGCACCTTTTATAGACCACCAGAATATTGAAGAGGA...GCTTGGTTCATGGATTCTAGCCTTGCCCGTTGCGCAGTATATACTGATCCAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp GACTTGGCTACACCTAAAGGGGAACTTAGTACAAGACTTTTTCTTCACCAGAATCAAGGTGTAAATGTTTaGCCCCAATCGGGCTTCAGA +
Preference number: 4 (lower is better)
Translates to: DLATPKGELSTRLFLHQNQGVNV*PQSGFR
Trigger: TCTGAAGCCCGATTGGGGCCAAACATTTACACCTTG...ATTCTGGTGAAGAAAAAGTCTTGTACTAAGTTCCCCTTTAGGTGTAGCCAAGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp GTTACTATGAAGCAAGGTGTAAATGTTTGGCCCCAATCGGGCTTCAGAAATGGTGTTCTTCACAACCGATaGGGGAATAATTCAACATGG +
Preference number: 4 (lower is better)
Translates to: VTMKQGVNVWPQSGFRNGVLHNR*GNNSTW
Trigger: CCATGTTGAATTATTCCCCCATCGGTTGTGAAGAAC...ACCATTTCTGAAGCCCGATTGGGGCCAAACATTTACACCTTGCTTCATAGTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp GTGTCCAACAACGTTCTAACGACGTGCTTCATCTCAACTGGTTACTATGAAGCAGAAGAGCAACAAGAATaGTATCCTGCCAGACAAAAG +
Preference number: 4 (lower is better)
Translates to: VSNNVLTTCFISTGYYEAEEQQE*YPARQK
Trigger: CTTTTGTCTGGCAGGATACCATTCTTGTTGCTCTTC...TGCTTCATAGTAACCAGTTGAGATGAAGCACGTCGTTAGAACGTTGTTGGACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp CTGAATGTAGCACAGTTCTTCACAACCGATGGGGGAATAATTCAACATGGTGTCTCTCATTCCAACAGCTaGAGTCACCCTATTTATCCT +
Preference number: 4 (lower is better)
Translates to: LNVAQFFTTDGGIIQHGVSHSNS*SHPIYP
Trigger: AGGATAAATAGGGTGACTCCAGCTGTTGGAATGAGA...GACACCATGTTGAATTATTCCCCCATCGGTTGTGAAGAACTGTGCTACATTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp ATCTGGATCAGTATATACTGCGCAACGGGCAAGGCTAGAATCCATGAACCAAGCGTGGTCTCTGCAAAATaGAGCTTGAAGAAATCTTTT +
Preference number: 4 (lower is better)
Translates to: IWISIYCATGKARIHEPSVVSAK*SLKKSF
Trigger: AAAAGATTTCTTCAAGCTCCATTTTGCAGAGACCAC...GCTTGGTTCATGGATTCTAGCCTTGCCCGTTGCGCAGTATATACTGATCCAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp GTGGATCTATTCCCCTCGCCACACACACACATTTTCAAGGAGCCAATAACATTTTGTTACCATAGAGACTaGGGTGTATTAACGGCTTCA +
Preference number: 4 (lower is better)
Translates to: VDLFPSPHTHIFKEPITFCYHRD*GVLTAS
Trigger: TGAAGCCGTTAATACACCCCAGTCTCTATGGTAACA...AAATGTTATTGGCTCCTTGAAAATGTGTGTGTGTGGCGAGGGGAATAGATCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp GTTACTATGAAGCAAGGTGTAAATGTTTGGCCCCAATCGGGCTTCAGAAATGGTAGCACAGTCACTGCATaGCAAATGTATGAAACAGAC +
Preference number: 4 (lower is better)
Translates to: VTMKQGVNVWPQSGFRNGSTVTA*QMYETD
Trigger: GTCTGTTTCATACATTTGCCATGCAGTGACTGTGCT...ACCATTTCTGAAGCCCGATTGGGGCCAAACATTTACACCTTGCTTCATAGTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp ATGACGAGCATGTCTGTCCAGCTATCAATCATGTTTGTTTGCACCAAATCCCAAATGGAAGTAATGTGTTaGAGGGCAACCCAAAAGGAC +
Preference number: 4 (lower is better)
Translates to: MTSMSVQLSIMFVCTKSQMEVMC*RATQKD
Trigger: GTCCTTTTGGGTTGCCCTCCAACACATTACTTCCAT...TTGGGATTTGGTGCAAACAAACATGATTGATAGCTGGACAGACATGCTCGTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp GTGCACGAGACTTTCAGTAAAAATGACAAGATCCTAGAACAGCTGTTTCCAGGAACATACATGCTTTTGTaGATCTATTCCCCTCGCCAC +
Preference number: 4 (lower is better)
Translates to: VHETFSKNDKILEQLFPGTYMLL*IYSPRH
Trigger: GTGGCGAGGGGAATAGATCCACAAAAGCATGTATGT...TCCTGGAAACAGCTGTTCTAGGATCTTGTCATTTTTACTGAAAGTCTCGTGCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000480676.2
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp AGCTGCAAAGATCTCAAGCTAAATAAGGCGGAAAGATTTGGAGAAACAAAAGAAAATGACATCCTCATCTaGCTGGGAGAGCCGCTTCTT +
Preference number: 4 (lower is better)
Translates to: SCKDLKLNKAERFGETKENDILI*LGEPLL
Trigger: AAGAAGCGGCTCTCCCAGTCAGATGAGGATGTCATT...TTCTTTTGTTTCTCCAAATCTTTCCGCCTTATTTAGCTTGAGATCTTTGCAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp GTGCACGAGACTTTCAGTAAAAATGACAAGATCCTAGAACAGCTGTTTCCAGGATCTCCTTCCATGACATaGTTTCGGAATTTGGTAGCA +
Preference number: 4 (lower is better)
Translates to: VHETFSKNDKILEQLFPGSPSMT*FRNLVA
Trigger: TGCTACCAAATTCCGAAATCATGTCATGGAAGGAGA...TCCTGGAAACAGCTGTTCTAGGATCTTGTCATTTTTACTGAAAGTCTCGTGCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp TACACAGAAGAGCAACAAGAATGGTATCCTGCCAGACAAAAGACAGGAAGGAAATCTCCTTCCATGACATaGTTTCGGAATTTGGTAGCA +
Preference number: 4 (lower is better)
Translates to: YTEEQQEWYPARQKTGRKSPSMT*FRNLVA
Trigger: TGCTACCAAATTCCGAAATCATGTCATGGAAGGAGA...TTTCCTTCCTGTCTTTTGTCTGGCAGGATACCATTCTTGTTGCTCTTCTGTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp TCTGAAATGGAAGTAATGTGTTGGAGGGCAACCCAAAAGGACAGTTGCGAAATTTCTCCTTCCATGACATaGTTTCGGAATTTGGTAGCA +
Preference number: 4 (lower is better)
Translates to: SEMEVMCWRATQKDSCEISPSMT*FRNLVA
Trigger: TGCTACCAAATTCCGAAATCATGTCATGGAAGGAGA...AATTTCGCAACTGTCCTTTTGGGTTGCCCTCCAACACATTACTTCCATTTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp GACTTGGCTACACCTAAAGGGGAACTTAGTACAAGACTTTTTCTTCACCAGAATCTTACCACAATAGCATaGGGAGAATGCACTAAAGGC +
Preference number: 4 (lower is better)
Translates to: DLATPKGELSTRLFLHQNLTTIA*GECTKG
Trigger: GCCTTTAGTGCATTCTCCTCATGCTATTGTGGTAAG...ATTCTGGTGAAGAAAAAGTCTTGTACTAAGTTCCCCTTTAGGTGTAGCCAAGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414423.9
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp AATGGAAGTAATGTGTTGGAGGGCAACCCAAAAGGACAGTTGCGAAATTATGAAATTCCCAACAACGTTTaGGAGATTTCAAGTGCGCCT +
Preference number: 4 (lower is better)
Translates to: NGSNVLEGNPKGQLRNYEIPNNV*EISSAP
Trigger: AGGCGCACTTGAAATCTCTCAAACGTTGTTGGGAAT...TTCATAATTTCGCAACTGTCCTTTTGGGTTGCCCTCCAACACATTACTTCCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414423.9
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp AAAATATATATACTGAGTTCAATGGGTAAGCCTGAATGTAGCACAGTTCTTCACTCACAGCGTAGAACTTaGAGTGCCTCCAGGACCTTG +
Preference number: 4 (lower is better)
Translates to: KIYILSSMGKPECSTVLHSQRRT*SASRTL
Trigger: CAAGGTCCTGGAGGCACTTCAAGTTCTACGCTGTGA...GTGAAGAACTGTGCTACATTCAGGCTTACCCATTGAACTCAGTATATATATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp TACACAGAAGAGCAACAAGAATGGTATCCTGCCAGACAAAAGACAGGAAGGAAATCAAGTTTGGTATTGTaGTATAGGCACCGATCCCTT +
Preference number: 4 (lower is better)
Translates to: YTEEQQEWYPARQKTGRKSSLVL*YRHRSL
Trigger: AAGGGATCGGTGCCTATATCACAATACCAAACTTGA...TTTCCTTCCTGTCTTTTGTCTGGCAGGATACCATTCTTGTTGCTCTTCTGTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp TCAGATATGGTTTCTGAAATGGAAGTAATGTGTTGGAGGGCAACCCAAAAGGACGTCAAACTGTCTTCATaGGACTGGCTCATTTTTGTC +
Preference number: 4 (lower is better)
Translates to: SDMVSEMEVMCWRATQKDVKLSS*DWLIFV
Trigger: GACAAAAATGAGCCAGTCTCATGAAGACAGTTTGAC...GTCCTTTTGGGTTGCCCTCCAACACATTACTTCCATTTCAGAAACCATATCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000480676.2
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp GTAAGCCTGAATGTAGCACAGTTCTTCACAACCGATGGGGGAATAATTCAACATGTCAAACTGTCTTCATaGGACTGGCTCATTTTTGTC +
Preference number: 4 (lower is better)
Translates to: VSLNVAQFFTTDGGIIQHVKLSS*DWLIFV
Trigger: GACAAAAATGAGCCAGTCTCATGAAGACAGTTTGAC...ATGTTGAATTATTCCCCCATCGGTTGTGAAGAACTGTGCTACATTCAGGCTTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp GAGACTTTCAGTAAAAATGACAAGATCCTAGAACAGCTGTTTCCAGGACTTTTTTCGCTGGTGTGTATCTaGTGCCAGAACAGTCTTTCC +
Preference number: 4 (lower is better)
Translates to: ETFSKNDKILEQLFPGLFSLVCI*CQNSLS
Trigger: GGAAAGACTGTTCTGGCATCAGATACACACCAGCGA...AAAAAGTCCTGGAAACAGCTGTTCTAGGATCTTGTCATTTTTACTGAAAGTCTC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000480676.2
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp CTGAATGTAGCACAGTTCTTCACAACCGATGGGGGAATAATTCAACATGGTGTCTTCAAGATCGGGTACTaGTGTTCCTTCAGGAATAAA +
Preference number: 4 (lower is better)
Translates to: LNVAQFFTTDGGIIQHGVFKIGY*CSFRNK
Trigger: TTTATTCCTGAAGGAACATCAGTACCCGATCTTGAA...GACACCATGTTGAATTATTCCCCCATCGGTTGTGAAGAACTGTGCTACATTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp GTGGATCTATTCCCCTCGCCACACACACACATTTTCAAGGAGCCAATAACATTTAAACCAACTGACTACTaGTGTCTCATGTTGGTGTAT +
Preference number: 4 (lower is better)
Translates to: VDLFPSPHTHIFKEPITFKPTDY*CLMLVY
Trigger: ATACACCAACATGAGACATCAGTAGTCAGTTGGTTT...AAATGTTATTGGCTCCTTGAAAATGTGTGTGTGTGGCGAGGGGAATAGATCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp GTGGATCTATTCCCCTCGCCACACACACACATTTTCAAGGAGCCAATAACATTTAGCACCAGTTTAGAATaGGGTTCAGTATGGCAATAT +
Preference number: 4 (lower is better)
Translates to: VDLFPSPHTHIFKEPITFSTSLE*GSVWQY
Trigger: ATATTGCCATACTGAACCTCATTCTAAACTGGTGCT...AAATGTTATTGGCTCCTTGAAAATGTGTGTGTGTGGCGAGGGGAATAGATCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp TCTCAACTGGTTACTATGAAGCAAGGTGTAAATGTTTGGCCCCAATCGGGCTTCCTATTTATCCTCTACTaGAAAAGGGAGGGAATTTCA +
Preference number: 4 (lower is better)
Translates to: SQLVTMKQGVNVWPQSGFLFILY*KREGIS
Trigger: TGAAATTCCCTCCCTTTTTCAGTAGAGGATAAATAG...GAAGCCCGATTGGGGCCAAACATTTACACCTTGCTTCATAGTAACCAGTTGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp ACTAACCTGATTTTTGGAGCCCAAATTCTCCACTCTATTTTGATCTATGTGCAAGTGCCAAATTGCCCCTaGATGGGCACAAATCTGAGT +
Preference number: 4 (lower is better)
Translates to: TNLIFGAQILHSILIYVQVPNCP*MGTNLS
Trigger: ACTCAGATTTGTGCCCATTCAGGGGCAATTTGGCAC...TTGCACATAGATCAAAATAGAGTGGAGAATTTGGGCTCCAAAAATCAGGTTAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp GAGACTTTCAGTAAAAATGACAAGATCCTAGAACAGCTGTTTCCAGGACTTTTTGTGCCAAATTGCCCCTaGATGGGCACAAATCTGAGT +
Preference number: 4 (lower is better)
Translates to: ETFSKNDKILEQLFPGLFVPNCP*MGTNLS
Trigger: ACTCAGATTTGTGCCCATTCAGGGGCAATTTGGCAC...AAAAAGTCCTGGAAACAGCTGTTCTAGGATCTTGTCATTTTTACTGAAAGTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp GAACCAAGCTGCAAAGATCTCAAGCTAAATAAGGCGGAAAGATTTGGAGAAACAACTTCAGAAGCACTCTaGAAACTCAGATCTAGGGGT +
Preference number: 4 (lower is better)
Translates to: EPSCKDLKLNKAERFGETTSEAL*KLRSRG
Trigger: ACCCCTAGATCTGAGTTTTCAGAGTGCTTCTGAAGT...TGTTTCTCCAAATCTTTCCGCCTTATTTAGCTTGAGATCTTTGCAGCTTGGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp AGCACTGTTTCTGACCATGTCTCATGTGGTATTCCAGAAGAGCATCAGTTATACATGAGCCTACTAACCTaGTTTTTGGAGCCCAAATTC +
Preference number: 4 (lower is better)
Translates to: STVSDHVSCGIPEEHQLYMSLLT*FLEPKF
Trigger: GAATTTGGGCTCCAAAAATCAGGTTAGTAGGCTCAT...GTATAACTGATGCTCTTCTGGAATACCACATGAGACATGGTCAGAAACAGTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp GTAAGCCTGAATGTAGCACAGTTCTTCACAACCGATGGGGGAATAATTCAACATTTGAGAGATTTCAAGTaGGCCTCTTACCACAATAGC +
Preference number: 4 (lower is better)
Translates to: VSLNVAQFFTTDGGIIQHLRDFK*ASYHNS
Trigger: GCTATTGTGGTAAGAGGCGCACTTGAAATCTCTCAA...ATGTTGAATTATTCCCCCATCGGTTGTGAAGAACTGTGCTACATTCAGGCTTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp TTCACTGGTTTATCATCTGGATCAGTATATACTGCGCAACGGGCAAGGCTAGAATATTCTAGGTACTTCTaGTGCAGCAGCAAAAACTTC +
Preference number: 4 (lower is better)
Translates to: FTGLSSGSVYTAQRARLEYSRYF*CSSKNF
Trigger: GAAGTTTTTGCTGCTGCAGCAGAAGTACCTAGAATA...TTCTAGCCTTGCCCGTTGCGCAGTATATACTGATCCAGATGATAAACCAGTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp TGTATCGCTGATTCCTACTCTTTTGCTAGATCACACCAAAATTACTTCCTAAGTGGGAAGCTGTCCCTTTaGCTTCCCATTCTGCTTTTG +
Preference number: 4 (lower is better)
Translates to: CIADSYSFARSHQNYFLSGKLSL*LPILLL
Trigger: CAAAAGCAGAATGGGAAGGCAAAGGGACAGCTTCCC...ACTTAGGAAGTAATTTTGGTGTGATCTAGCAAAAGAGTAGGAATCAGCGATACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp GAGACTTTCAGTAAAAATGACAAGATCCTAGAACAGCTGTTTCCAGGACTTTTTGGGAAGCTGTCCCTTTaGCTTCCCATTCTGCTTTTG +
Preference number: 4 (lower is better)
Translates to: ETFSKNDKILEQLFPGLFGKLSL*LPILLL
Trigger: CAAAAGCAGAATGGGAAGGCAAAGGGACAGCTTCCC...AAAAAGTCCTGGAAACAGCTGTTCTAGGATCTTGTCATTTTTACTGAAAGTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp AGCACTGTTTCTGACCATGTCTCATGTGGTATTCCAGAAGAGCATCAGTTATACCACACTTCATTACAATaGTCCGTAAGTATCTGCTGC +
Preference number: 4 (lower is better)
Translates to: STVSDHVSCGIPEEHQLYHTSLQ*SVSICC
Trigger: GCAGCAGATACTTACGGAGCATTGTAATGAAGTGTG...GTATAACTGATGCTCTTCTGGAATACCACATGAGACATGGTCAGAAACAGTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp GTGCACGAGACTTTCAGTAAAAATGACAAGATCCTAGAACAGCTGTTTCCAGGACACACTTCATTACAATaGTCCGTAAGTATCTGCTGC +
Preference number: 4 (lower is better)
Translates to: VHETFSKNDKILEQLFPGHTSLQ*SVSICC
Trigger: GCAGCAGATACTTACGGAGCATTGTAATGAAGTGTG...TCCTGGAAACAGCTGTTCTAGGATCTTGTCATTTTTACTGAAAGTCTCGTGCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp TTCACTGGTTTATCATCTGGATCAGTATATACTGCGCAACGGGCAAGGCTAGAAGTCATCTGGACTCCATaGAATATAAGAAACGCCATA +
Preference number: 4 (lower is better)
Translates to: FTGLSSGSVYTAQRARLEVIWTP*NIRNAI
Trigger: TATGGCGTTTCTTATATTGCATGGAGTCCAGATGAC...TTCTAGCCTTGCCCGTTGCGCAGTATATACTGATCCAGATGATAAACCAGTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp CTGGATTCCAAGCCACACTTGTCAAACTGTCTTCATGAGACTGGCTCATTTTTGACCATCAACTATCCATaGTACTGCATTCCTCTTCAA +
Preference number: 4 (lower is better)
Translates to: LDSKPHLSNCLHETGSFLTINYP*YCIPLQ
Trigger: TTGAAGAGGAATGCAGTAGCATGGATAGTTGATGGT...CAAAAATGAGCCAGTCTCATGAAGACAGTTTGACAAGTGTGGCTTGGAATCCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486652.5
CDS-3UTR GCA 90 bp GACATAGTTCACTGGTTTATCATCTGGATCAGTATATACTGCGCAACGGGCAAGACCATCAACTATCCATaGTACTGCATTCCTCTTCAA +
Preference number: 4 (lower is better)
Translates to: DIVHWFIIWISIYCATGKTINYP*YCIPLQ
Trigger: TTGAAGAGGAATGCAGTAGCATGGATAGTTGATGGT...CTTGCCCGTTGCGCAGTATATACTGATCCAGATGATAAACCAGTGAACTATGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp TCATCTGGATCAGTATATACTGCGCAACGGGCAAGGCTAGAATCCATGAACCAATCAATCATGTTTGTTTaGACCAAATCCCAAGCCATT +
Preference number: 4 (lower is better)
Translates to: SSGSVYTAQRARLESMNQSIMFV*TKSQAI
Trigger: AATGGCTTGGGATTTGGTGCAAACAAACATGATTGA...TTGGTTCATGGATTCTAGCCTTGCCCGTTGCGCAGTATATACTGATCCAGATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp GTAAGCCTGAATGTAGCACAGTTCTTCACAACCGATGGGGGAATAATTCAACATAACGTTCTAACGACGTaGTTCATCTCAACTGGTTAC +
Preference number: 4 (lower is better)
Translates to: VSLNVAQFFTTDGGIIQHNVLTT*FISTGY
Trigger: GTAACCAGTTGAGATGAAGCACGTCGTTAGAACGTT...ATGTTGAATTATTCCCCCATCGGTTGTGAAGAACTGTGCTACATTCAGGCTTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp AGCACTGTTTCTGACCATGTCTCATGTGGTATTCCAGAAGAGCATCAGTTATACACAAGAATGGTATCCTaGCAGACAAAAGACAGGAAG +
Preference number: 4 (lower is better)
Translates to: STVSDHVSCGIPEEHQLYTRMVS*QTKDRK
Trigger: CTTCCTGTCTTTTGTCTGGCAGGATACCATTCTTGT...GTATAACTGATGCTCTTCTGGAATACCACATGAGACATGGTCAGAAACAGTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp TCATCTGGATCAGTATATACTGCGCAACGGGCAAGGCTAGAATCCATGAACCAAATCCATGAACCAAGCTaGAAAGATCTCAAGCTAAAT +
Preference number: 4 (lower is better)
Translates to: SSGSVYTAQRARLESMNQIHEPS*KDLKLN
Trigger: ATTTAGCTTGAGATCTTTGCAGCTTGGTTCATGGAT...TTGGTTCATGGATTCTAGCCTTGCCCGTTGCGCAGTATATACTGATCCAGATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp TTGTTAGTATCTTGTGGCTGGCTTCATAGTATAAGACTCACTCTTAAGCCTACTTGGATCAGTATATACTaGGCAACGGGCAAGGCTAGA +
Preference number: 4 (lower is better)
Translates to: LLVSCGWLHSIRLTLKPTWISIY*ATGKAR
Trigger: TCTAGCCTTGCCCGTTGCGCAGTATATACTGATCCA...AGTAGGCTTAAGAGTGAGTCTTATACTATGAAGCCAGCCACAAGATACTAACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp ATCTGGATCAGTATATACTGCGCAACGGGCAAGGCTAGAATCCATGAACCAAGCTGCTATAGAAACCTTTaGATAGTTGTTACTCCGTTT +
Preference number: 4 (lower is better)
Translates to: IWISIYCATGKARIHEPSCYRNL*IVVTPF
Trigger: AAACGGAGTAACAACTATGCAAAGGTTTCTATAGCA...GCTTGGTTCATGGATTCTAGCCTTGCCCGTTGCGCAGTATATACTGATCCAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp ACTAACCTGATTTTTGGAGCCCAAATTCTCCACTCTATTTTGATCTATGTGCAAGTATGTACAGGAAGCTaGCAGTTAAGACAGACCCGG +
Preference number: 4 (lower is better)
Translates to: TNLIFGAQILHSILIYVQVCTGS*QLRQTR
Trigger: CCGGGTCTGTCTTAACTGGCAGCTTCCTGTACATAC...TTGCACATAGATCAAAATAGAGTGGAGAATTTGGGCTCCAAAAATCAGGTTAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp AGCACTGTTTCTGACCATGTCTCATGTGGTATTCCAGAAGAGCATCAGTTATACGGGTCAGTTCTTGTTTaGAGGAACCAACATCCTAAA +
Preference number: 4 (lower is better)
Translates to: STVSDHVSCGIPEEHQLYGSVLV*RNQHPK
Trigger: TTTAGGATGTTGGTTCCTGCAAACAAGAACTGACCC...GTATAACTGATGCTCTTCTGGAATACCACATGAGACATGGTCAGAAACAGTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp TCATCTGGATCAGTATATACTGCGCAACGGGCAAGGCTAGAATCCATGAACCAACTAGTTCCACCACAATaGCATGTAAATCTTGACAAT +
Preference number: 4 (lower is better)
Translates to: SSGSVYTAQRARLESMNQLVPPQ*HVNLDN
Trigger: ATTGTCAAGATTTACATGGCATTGTGGTGGAACTAG...TTGGTTCATGGATTCTAGCCTTGCCCGTTGCGCAGTATATACTGATCCAGATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp TCTCAACTGGTTACTATGAAGCAAGGTGTAAATGTTTGGCCCCAATCGGGCTTCCTAGTTCCACCACAATaGCATGTAAATCTTGACAAT +
Preference number: 4 (lower is better)
Translates to: SQLVTMKQGVNVWPQSGFLVPPQ*HVNLDN
Trigger: ATTGTCAAGATTTACATGGCATTGTGGTGGAACTAG...GAAGCCCGATTGGGGCCAAACATTTACACCTTGCTTCATAGTAACCAGTTGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp GTGGATCTATTCCCCTCGCCACACACACACATTTTCAAGGAGCCAATAACATTTTCCATCAACTATCCATaGTACTGCATTCCTCTTCAA +
Preference number: 4 (lower is better)
Translates to: VDLFPSPHTHIFKEPITFSINYP*YCIPLQ
Trigger: TTGAAGAGGAATGCAGTAGCATGGATAGTTGATGGA...AAATGTTATTGGCTCCTTGAAAATGTGTGTGTGTGGCGAGGGGAATAGATCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000480676.2
CDS-3UTR CCA 90 bp TTCCAAAGTGGTTGTATCGCTGATTCCTACTCTTTTGCTAGATCACACCAAAATCGTAGGTCTTCTGCATaGCTACACATCAGATACCCA +
Preference number: 4 (lower is better)
Translates to: FQSGCIADSYSFARSHQNRRSSA*LHIRYP
Trigger: TGGGTATCTGATGTGTAGCCATGCAGAAGACCTACG...ATTTTGGTGTGATCTAGCAAAAGAGTAGGAATCAGCGATACAACCACTTTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp TGTAGCACAGTTCTTCACAACCGATGGGGGAATAATTCAACATGGTGTCCAACACTCCTACTACAAACATaGTCTATAAGCAGAGACACA +
Preference number: 4 (lower is better)
Translates to: CSTVLHNRWGNNSTWCPTLLLQT*SISRDT
Trigger: TGTGTCTCTGCTTATAGACCATGTTTGTAGTAGGAG...TGTTGGACACCATGTTGAATTATTCCCCCATCGGTTGTGAAGAACTGTGCTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp AAGCCTGAATGTAGCACAGTTCTTCACAACCGATGGGGGAATAATTCAACATGGCTCCTACTACAAACATaGTCTATAAGCAGAGACACA +
Preference number: 4 (lower is better)
Translates to: KPECSTVLHNRWGNNSTWLLLQT*SISRDT
Trigger: TGTGTCTCTGCTTATAGACCATGTTTGTAGTAGGAG...CCATGTTGAATTATTCCCCCATCGGTTGTGAAGAACTGTGCTACATTCAGGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp ATCTGGATCAGTATATACTGCGCAACGGGCAAGGCTAGAATCCATGAACCAAGCAAGATAGTTGTCATCTaGACTCCATGCAATATAAGA +
Preference number: 4 (lower is better)
Translates to: IWISIYCATGKARIHEPSKIVVI*TPCNIR
Trigger: TCTTATATTGCATGGAGTCCAGATGACAACTATCTT...GCTTGGTTCATGGATTCTAGCCTTGCCCGTTGCGCAGTATATACTGATCCAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp AAATATACCAGTATTAACCAAACCTTAAACTCAGAGGGCACTTCACATGTGCACTGTCAGCTCCGCAATTaGCAGTTCACTACGTTTGTG +
Preference number: 4 (lower is better)
Translates to: KYTSINQTLNSEGTSHVHCQLRN*QFTTFV
Trigger: CACAAACGTAGTGAACTGCCAATTGCGGAGCTGACA...GTGCACATGTGAAGTGCCCTCTGAGTTTAAGGTTTGGTTAATACTGGTATATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000480676.2
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp AACAAGATAGTTGTCATCTGGACTCCATGCAATATAAGAAACGCCATAAGCATGTGTCAGCTCCGCAATTaGCAGTTCACTACGTTTGTG +
Preference number: 4 (lower is better)
Translates to: NKIVVIWTPCNIRNAISMCQLRN*QFTTFV
Trigger: CACAAACGTAGTGAACTGCCAATTGCGGAGCTGACA...CATGCTTATGGCGTTTCTTATATTGCATGGAGTCCAGATGACAACTATCTTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486652.5
CDS-3UTR CCA 90 bp CTCTCTCTCACACACACACAGAACACACACACACATTTTTATACTATTGGTTTTCATCATCTGAGGCGCTaGCCATCATGGATGGAATCT +
Preference number: 4 (lower is better)
Translates to: LSLTHTQNTHTHFYTIGFHHLRR*PSWMES
Trigger: AGATTCCATCCATGATGGCCAGCGCCTCAGATGATG...AAAACCAATAGTATAAAAATGTGTGTGTGTGTTCTGTGTGTGTGTGAGAGAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000480676.2
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp GCACAGTTCTTCACAACCGATGGGGGAATAATTCAACATGGTGTCCAACAACGTTCTTCAATATTCTGGTaGTCTATAAAAGGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: AQFFTTDGGIIQHGVQQRSSIFW*SIKGAG
Trigger: ACCAGCACCTTTTATAGACCACCAGAATATTGAAGA...ACGTTGTTGGACACCATGTTGAATTATTCCCCCATCGGTTGTGAAGAACTGTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp GTTCACTGGTTTATCATCTGGATCAGTATATACTGCGCAACGGGCAAGGCTAGATCCTCTTCAATATTCTaGTGGTCTATAAAAGGTGCT +
Preference number: 4 (lower is better)
Translates to: VHWFIIWISIYCATGKARSSSIF*WSIKGA
Trigger: AGCACCTTTTATAGACCACCAGAATATTGAAGAGGA...TCTAGCCTTGCCCGTTGCGCAGTATATACTGATCCAGATGATAAACCAGTGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp TCATCTGGATCAGTATATACTGCGCAACGGGCAAGGCTAGAATCCATGAACCAAATTTGTAAACAGCTGTaGAGTTTCTATGCCCACATT +
Preference number: 4 (lower is better)
Translates to: SSGSVYTAQRARLESMNQICKQL*SFYAHI
Trigger: AATGTGGGCATAGAAACTCCACAGCTGTTTACAAAT...TTGGTTCATGGATTCTAGCCTTGCCCGTTGCGCAGTATATACTGATCCAGATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp TCTGAAATGGAAGTAATGTGTTGGAGGGCAACCCAAAAGGACAGTTGCGAAATTAGCACAGTCACTGCATaGCAAATGTATGAAACAGAC +
Preference number: 4 (lower is better)
Translates to: SEMEVMCWRATQKDSCEISTVTA*QMYETD
Trigger: GTCTGTTTCATACATTTGCCATGCAGTGACTGTGCT...AATTTCGCAACTGTCCTTTTGGGTTGCCCTCCAACACATTACTTCCATTTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp GTTCACTGGTTTATCATCTGGATCAGTATATACTGCGCAACGGGCAAGGCTAGATTAGTATCTTGTGGCTaGCTTCATAGTATAAGACTC +
Preference number: 4 (lower is better)
Translates to: VHWFIIWISIYCATGKARLVSCG*LHSIRL
Trigger: GAGTCTTATACTATGAAGCCAGCCACAAGATACTAA...TCTAGCCTTGCCCGTTGCGCAGTATATACTGATCCAGATGATAAACCAGTGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp AGCTGCAAAGATCTCAAGCTAAATAAGGCGGAAAGATTTGGAGAAACAAAAGAAATCCTGACTCTTGCATaGGGAGATCAACAGTCTGGT +
Preference number: 4 (lower is better)
Translates to: SCKDLKLNKAERFGETKEILTLA*GDQQSG
Trigger: ACCAGACTGTTGATCTCCTCATGCAAGAGTCAGGAT...TTCTTTTGTTTCTCCAAATCTTTCCGCCTTATTTAGCTTGAGATCTTTGCAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp TTCCAAAGTGGTTGTATCGCTGATTCCTACTCTTTTGCTAGATCACACCAAAATCTTACCACAATAGCATaGGGAGAATGCACTAAAGGC +
Preference number: 4 (lower is better)
Translates to: FQSGCIADSYSFARSHQNLTTIA*GECTKG
Trigger: GCCTTTAGTGCATTCTCCTCATGCTATTGTGGTAAG...ATTTTGGTGTGATCTAGCAAAAGAGTAGGAATCAGCGATACAACCACTTTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414423.9
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp CCAAGCTGCAAAGATCTCAAGCTAAATAAGGCGGAAAGATTTGGAGAAACAAAAATTCCCAACAACGTTTaGGAGATTTCAAGTGCGCCT +
Preference number: 4 (lower is better)
Translates to: PSCKDLKLNKAERFGETKIPNNV*EISSAP
Trigger: AGGCGCACTTGAAATCTCTCAAACGTTGTTGGGAAT...TTTTGTTTCTCCAAATCTTTCCGCCTTATTTAGCTTGAGATCTTTGCAGCTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp TACACAGAAGAGCAACAAGAATGGTATCCTGCCAGACAAAAGACAGGAAGGAAATACCCACTAAGAACATaGATGCGCTCTGTATTGTAT +
Preference number: 4 (lower is better)
Translates to: YTEEQQEWYPARQKTGRKYPLRT*MRSVLY
Trigger: ATACAATACAGAGCGCATTCATGTTCTTAGTGGGTA...TTTCCTTCCTGTCTTTTGTCTGGCAGGATACCATTCTTGTTGCTCTTCTGTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp AAAATATATATACTGAGTTCAATGGGTAAGCCTGAATGTAGCACAGTTCTTCACTCGCTGGTGTGTATCTaGTGCCAGAACAGTCTTTCC +
Preference number: 4 (lower is better)
Translates to: KIYILSSMGKPECSTVLHSLVCI*CQNSLS
Trigger: GGAAAGACTGTTCTGGCATCAGATACACACCAGCGA...GTGAAGAACTGTGCTACATTCAGGCTTACCCATTGAACTCAGTATATATATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp TCAGATATGGTTTCTGAAATGGAAGTAATGTGTTGGAGGGCAACCCAAAAGGACTTCAAGATCGGGTACTaGTGTTCCTTCAGGAATAAA +
Preference number: 4 (lower is better)
Translates to: SDMVSEMEVMCWRATQKDFKIGY*CSFRNK
Trigger: TTTATTCCTGAAGGAACATCAGTACCCGATCTTGAA...GTCCTTTTGGGTTGCCCTCCAACACATTACTTCCATTTCAGAAACCATATCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp AAGGCTAGAATCCATGAACCAAGCTGCAAAGATCTCAAGCTAAATAAGGCGGAAAAACCAACTGACTACTaGTGTCTCATGTTGGTGTAT +
Preference number: 4 (lower is better)
Translates to: KARIHEPSCKDLKLNKAEKPTDY*CLMLVY
Trigger: ATACACCAACATGAGACATCAGTAGTCAGTTGGTTT...TTCCGCCTTATTTAGCTTGAGATCTTTGCAGCTTGGTTCATGGATTCTAGCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp GTGTCCAACAACGTTCTAACGACGTGCTTCATCTCAACTGGTTACTATGAAGCATTACTGAAAACCAACTaGCTACTGATGTCTCATGTT +
Preference number: 4 (lower is better)
Translates to: VSNNVLTTCFISTGYYEALLKTN*LLMSHV
Trigger: AACATGAGACATCAGTAGTCAGTTGGTTTTCAGTAA...TGCTTCATAGTAACCAGTTGAGATGAAGCACGTCGTTAGAACGTTGTTGGACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp TCTGAAATGGAAGTAATGTGTTGGAGGGCAACCCAAAAGGACAGTTGCGAAATTAGCACCAGTTTAGAATaGGGTTCAGTATGGCAATAT +
Preference number: 4 (lower is better)
Translates to: SEMEVMCWRATQKDSCEISTSLE*GSVWQY
Trigger: ATATTGCCATACTGAACCTCATTCTAAACTGGTGCT...AATTTCGCAACTGTCCTTTTGGGTTGCCCTCCAACACATTACTTCCATTTCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp GTTACTATGAAGCAAGGTGTAAATGTTTGGCCCCAATCGGGCTTCAGAAATGGTTTTAAAAGCACAATGTaGACATCAGGCTTTTGGCTT +
Preference number: 4 (lower is better)
Translates to: VTMKQGVNVWPQSGFRNGFKSTM*TSGFWL
Trigger: AAGCCAAAAGCCTGATGTTCACATTGTGCTTTTAAA...ACCATTTCTGAAGCCCGATTGGGGCCAAACATTTACACCTTGCTTCATAGTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp AAGCCTGAATGTAGCACAGTTCTTCACAACCGATGGGGGAATAATTCAACATGGTTTAAAAGCACAATGTaGACATCAGGCTTTTGGCTT +
Preference number: 4 (lower is better)
Translates to: KPECSTVLHNRWGNNSTWFKSTM*TSGFWL
Trigger: AAGCCAAAAGCCTGATGTTCACATTGTGCTTTTAAA...CCATGTTGAATTATTCCCCCATCGGTTGTGAAGAACTGTGCTACATTCAGGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp GAACCAAGCTGCAAAGATCTCAAGCTAAATAAGGCGGAAAGATTTGGAGAAACACAATGGAAGAATTTTTaGCATCCAAGCCCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: EPSCKDLKLNKAERFGETQWKNF*HPSPLL
Trigger: GAGAAGAGGGCTTGGATGTCAAAAATTCTTCCATTG...TGTTTCTCCAAATCTTTCCGCCTTATTTAGCTTGAGATCTTTGCAGCTTGGTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp GACTTGGCTACACCTAAAGGGGAACTTAGTACAAGACTTTTTCTTCACCAGAATTTGATAAGAGTCTGCTaGCCACGATCTGTCATTTTC +
Preference number: 4 (lower is better)
Translates to: DLATPKGELSTRLFLHQNLIRVC*PRSVIF
Trigger: GAAAATGACAGATCGTGGTCAGCAGACTCTTATCAA...ATTCTGGTGAAGAAAAAGTCTTGTACTAAGTTCCCCTTTAGGTGTAGCCAAGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp CTCTCTCTCACACACACACAGAACACACACACACATTTTTATACTATTGGTTTTTATATTTACCCACTGTaGGGCAGAGGTGATAGGGTC +
Preference number: 4 (lower is better)
Translates to: LSLTHTQNTHTHFYTIGFYIYPL*GRGDRV
Trigger: GACCCTATCACCTCTGCCTCACAGTGGGTAAATATA...AAAACCAATAGTATAAAAATGTGTGTGTGTGTTCTGTGTGTGTGTGAGAGAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000480676.2
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp AGCTGCAAAGATCTCAAGCTAAATAAGGCGGAAAGATTTGGAGAAACAAAAGAACGACATCCTGACTCTTaGATGAGGAGATCAACAGTC +
Preference number: 4 (lower is better)
Translates to: SCKDLKLNKAERFGETKERHPDS*MRRSTV
Trigger: GACTGTTGATCTCCTCATGCAAGAGTCAGGATGTCG...TTCTTTTGTTTCTCCAAATCTTTCCGCCTTATTTAGCTTGAGATCTTTGCAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp GAACCAAGCTGCAAAGATCTCAAGCTAAATAAGGCGGAAAGATTTGGAGAAACATCTAGGTACTTCTGCTaGAGCAGCAAAAACTTCATC +
Preference number: 4 (lower is better)
Translates to: EPSCKDLKLNKAERFGETSRYFC*SSKNFI
Trigger: GATGAAGTTTTTGCTGCTGCAGCAGAAGTACCTAGA...TGTTTCTCCAAATCTTTCCGCCTTATTTAGCTTGAGATCTTTGCAGCTTGGTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp ACCAGTCTACTACAAACATGGTCTATAAGCAGAGACACAGAATCTAGATTATTAGGGAAGCTGTCCCTTTaGCTTCCCATTCTGCTTTTG +
Preference number: 4 (lower is better)
Translates to: TSLLQTWSISRDTESRLLGKLSL*LPILLL
Trigger: CAAAAGCAGAATGGGAAGGCAAAGGGACAGCTTCCC...TAATAATCTAGATTCTGTGTCTCTGCTTATAGACCATGTTTGTAGTAGACTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486652.5
CDS-3UTR GCA 90 bp GTGTCCAACAACGTTCTAACGACGTGCTTCATCTCAACTGGTTACTATGAAGCAGTATCCGGATCAACTTaGCATATGATAACTGTTGTA +
Preference number: 4 (lower is better)
Translates to: VSNNVLTTCFISTGYYEAVSGST*HMITVV
Trigger: TACAACAGTTATCATATGGCAAGTTGATCCGGATAC...TGCTTCATAGTAACCAGTTGAGATGAAGCACGTCGTTAGAACGTTGTTGGACAC
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp GTTACTATGAAGCAAGGTGTAAATGTTTGGCCCCAATCGGGCTTCAGAAATGGTGTATCCGGATCAACTTaGCATATGATAACTGTTGTA +
Preference number: 4 (lower is better)
Translates to: VTMKQGVNVWPQSGFRNGVSGST*HMITVV
Trigger: TACAACAGTTATCATATGGCAAGTTGATCCGGATAC...ACCATTTCTGAAGCCCGATTGGGGCCAAACATTTACACCTTGCTTCATAGTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp GTGCACGAGACTTTCAGTAAAAATGACAAGATCCTAGAACAGCTGTTTCCAGGAGTCATCTGGACTCCATaGAATATAAGAAACGCCATA +
Preference number: 4 (lower is better)
Translates to: VHETFSKNDKILEQLFPGVIWTP*NIRNAI
Trigger: TATGGCGTTTCTTATATTGCATGGAGTCCAGATGAC...TCCTGGAAACAGCTGTTCTAGGATCTTGTCATTTTTACTGAAAGTCTCGTGCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000480676.2
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp GTTTCTGACCATGTCTCATGTGGTATTCCAGAAGAGCATCAGTTATACTGTGTAGTGGTCTATAAAAGGTaGTGGTCCCCATATTCTAAC +
Preference number: 4 (lower is better)
Translates to: VSDHVSCGIPEEHQLYCVVVYKR*WSPYSN
Trigger: GTTAGAATATGGGGACCAGCACCTTTTATAGACCAC...TACACAGTATAACTGATGCTCTTCTGGAATACCACATGAGACATGGTCAGAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp ATCAGTATATACTGCGCAACGGGCAAGGCTAGAATCCATGAACCAAGCTGCAAAAACTATCCATGCTACTaGATTCCTCTTCAATATTCT +
Preference number: 4 (lower is better)
Translates to: ISIYCATGKARIHEPSCKNYPCY*IPLQYS
Trigger: AGAATATTGAAGAGGAATGCAGTAGCATGGATAGTT...TTTGCAGCTTGGTTCATGGATTCTAGCCTTGCCCGTTGCGCAGTATATACTGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp GTTTCTGACCATGTCTCATGTGGTATTCCAGAAGAGCATCAGTTATACTGTGTAACAAGAATGGTATCCTaGCAGACAAAAGACAGGAAG +
Preference number: 4 (lower is better)
Translates to: VSDHVSCGIPEEHQLYCVTRMVS*QTKDRK
Trigger: CTTCCTGTCTTTTGTCTGGCAGGATACCATTCTTGT...TACACAGTATAACTGATGCTCTTCTGGAATACCACATGAGACATGGTCAGAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp CATGCTACTGCATTCCTCTTCAATATTCTGGTGGTCTATAAAAGGTGCTGGTCCATCCATGAACCAAGCTaGAAAGATCTCAAGCTAAAT +
Preference number: 4 (lower is better)
Translates to: HATAFLFNILVVYKRCWSIHEPS*KDLKLN
Trigger: ATTTAGCTTGAGATCTTTGCAGCTTGGTTCATGGAT...GGACCAGCACCTTTTATAGACCACCAGAATATTGAAGAGGAATGCAGTAGCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486652.5
CDS-3UTR GCA 90 bp AAGCCTGAATGTAGCACAGTTCTTCACAACCGATGGGGGAATAATTCAACATGGATCCATGAACCAAGCTaGAAAGATCTCAAGCTAAAT +
Preference number: 4 (lower is better)
Translates to: KPECSTVLHNRWGNNSTWIHEPS*KDLKLN
Trigger: ATTTAGCTTGAGATCTTTGCAGCTTGGTTCATGGAT...CCATGTTGAATTATTCCCCCATCGGTTGTGAAGAACTGTGCTACATTCAGGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp CAGCTATCAATCATGTTTGTTTGCACCAAATCCCAAGCCATTAAAATACGACTATGGATCAGTATATACTaGGCAACGGGCAAGGCTAGA +
Preference number: 4 (lower is better)
Translates to: QLSIMFVCTKSQAIKIRLWISIY*ATGKAR
Trigger: TCTAGCCTTGCCCGTTGCGCAGTATATACTGATCCA...TAGTCGTATTTTAATGGCTTGGGATTTGGTGCAAACAAACATGATTGATAGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp TTTCATGACGAGCATGTCTGTCCAGCTATCAATCATGTTTGTTTGCACCAAATCTCTGAGTGTTACAAATaGACCGTAGCACACTGTAAC +
Preference number: 4 (lower is better)
Translates to: FHDEHVCPAINHVCLHQISECYK*TVAHCN
Trigger: GTTACAGTGTGCTACGGTGCATTTGTAACACTCAGA...GATTTGGTGCAAACAAACATGATTGATAGCTGGACAGACATGCTCGTCATGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp TTGTTAGTATCTTGTGGCTGGCTTCATAGTATAAGACTCACTCTTAAGCCTACTAGAGTAGAATCTGAGTaGCAAATTGCCCCTGAATGG +
Preference number: 4 (lower is better)
Translates to: LLVSCGWLHSIRLTLKPTRVESE*QIAPEW
Trigger: CCATTCAGGGGCAATTTGGCACTCAGATTCTACTCT...AGTAGGCTTAAGAGTGAGTCTTATACTATGAAGCCAGCCACAAGATACTAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp TACACAGAAGAGCAACAAGAATGGTATCCTGCCAGACAAAAGACAGGAAGGAAATGGATCAGAAAATCCTaGGATCAGTTTCTCATACCA +
Preference number: 4 (lower is better)
Translates to: YTEEQQEWYPARQKTGRKWIRKS*DQFLIP
Trigger: TGGTATGAGAAACTGATCGCAGGATTTTCTGATCCA...TTTCCTTCCTGTCTTTTGTCTGGCAGGATACCATTCTTGTTGCTCTTCTGTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp AGCACTGTTTCTGACCATGTCTCATGTGGTATTCCAGAAGAGCATCAGTTATACTGGATCAGAAAATCCTaGGATCAGTTTCTCATACCA +
Preference number: 4 (lower is better)
Translates to: STVSDHVSCGIPEEHQLYWIRKS*DQFLIP
Trigger: TGGTATGAGAAACTGATCGCAGGATTTTCTGATCCA...GTATAACTGATGCTCTTCTGGAATACCACATGAGACATGGTCAGAAACAGTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp GAACCAAGCTGCAAAGATCTCAAGCTAAATAAGGCGGAAAGATTTGGAGAAACAGGGTCAGTTCTTGTTTaGAGGAACCAACATCCTAAA +
Preference number: 4 (lower is better)
Translates to: EPSCKDLKLNKAERFGETGSVLV*RNQHPK
Trigger: TTTAGGATGTTGGTTCCTGCAAACAAGAACTGACCC...TGTTTCTCCAAATCTTTCCGCCTTATTTAGCTTGAGATCTTTGCAGCTTGGTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp TTGTTAGTATCTTGTGGCTGGCTTCATAGTATAAGACTCACTCTTAAGCCTACTAAACGACTGGTTAAGTaGTGCGCACTGACATGGAAA +
Preference number: 4 (lower is better)
Translates to: LLVSCGWLHSIRLTLKPTKRLVK*CALTWK
Trigger: TTTCCATGTCAGTGCGCAGCACTTAACCAGTCGTTT...AGTAGGCTTAAGAGTGAGTCTTATACTATGAAGCCAGCCACAAGATACTAACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp CTCTCTCTCACACACACACAGAACACACACACACATTTTTATACTATTGGTTTTCTGCTGCGTATAACATaGGAACTGCCTCCTACTACA +
Preference number: 4 (lower is better)
Translates to: LSLTHTQNTHTHFYTIGFLLRIT*ELPPTT
Trigger: TGTAGTAGGAGGCAGTTCCCATGTTATACGCAGCAG...AAAACCAATAGTATAAAAATGTGTGTGTGTGTTCTGTGTGTGTGTGAGAGAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp CCAATGTATACTCTTCAGACTAATGCACTCTTTCTATCAAGCCTTCTAAACTGTCTGCTGCGTATAACATaGGAACTGCCTCCTACTACA +
Preference number: 4 (lower is better)
Translates to: PMYTLQTNALFLSSLLNCLLRIT*ELPPTT
Trigger: TGTAGTAGGAGGCAGTTCCCATGTTATACGCAGCAG...ACAGTTTAGAAGGCTTGATAGAAAGAGTGCATTAGTCTGAAGAGTATACATTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp TCATCTGGATCAGTATATACTGCGCAACGGGCAAGGCTAGAATCCATGAACCAAAAGATAGTTGTCATCTaGACTCCATGCAATATAAGA +
Preference number: 4 (lower is better)
Translates to: SSGSVYTAQRARLESMNQKIVVI*TPCNIR
Trigger: TCTTATATTGCATGGAGTCCAGATGACAACTATCTT...TTGGTTCATGGATTCTAGCCTTGCCCGTTGCGCAGTATATACTGATCCAGATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp TGTATCGCTGATTCCTACTCTTTTGCTAGATCACACCAAAATTACTTCCTAAGTAAAGCGCTTCCCATCTaGATTCCAAGCCACACTTGT +
Preference number: 4 (lower is better)
Translates to: CIADSYSFARSHQNYFLSKALPI*IPSHTC
Trigger: ACAAGTGTGGCTTGGAATCCAGATGGGAAGCGCTTT...ACTTAGGAAGTAATTTTGGTGTGATCTAGCAAAAGAGTAGGAATCAGCGATACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp CCAATGTATACTCTTCAGACTAATGCACTCTTTCTATCAAGCCTTCTAAACTGTTGTCAGCTCCGCAATTaGCAGTTCACTACGTTTGTG +
Preference number: 4 (lower is better)
Translates to: PMYTLQTNALFLSSLLNCCQLRN*QFTTFV
Trigger: CACAAACGTAGTGAACTGCCAATTGCGGAGCTGACA...ACAGTTTAGAAGGCTTGATAGAAAGAGTGCATTAGTCTGAAGAGTATACATTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp TCCTATCCAATGTATACTCTTCAGACTAATGCACTCTTTCTATCAAGCCTTCTATGTCAGCTCCGCAATTaGCAGTTCACTACGTTTGTG +
Preference number: 4 (lower is better)
Translates to: SYPMYTLQTNALFLSSLLCQLRN*QFTTFV
Trigger: CACAAACGTAGTGAACTGCCAATTGCGGAGCTGACA...TAGAAGGCTTGATAGAAAGAGTGCATTAGTCTGAAGAGTATACATTGGATAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp ACTAACCTGATTTTTGGAGCCCAAATTCTCCACTCTATTTTGATCTATGTGCAATGTCAGCTCCGCAATTaGCAGTTCACTACGTTTGTG +
Preference number: 4 (lower is better)
Translates to: TNLIFGAQILHSILIYVQCQLRN*QFTTFV
Trigger: CACAAACGTAGTGAACTGCCAATTGCGGAGCTGACA...TTGCACATAGATCAAAATAGAGTGGAGAATTTGGGCTCCAAAAATCAGGTTAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp TATATTAAATCAGATATGGTTTCTGAAATGGAAGTAATGTGTTGGAGGGCAACCCATCATCTGAGGCGCTaGCCATCATGGATGGAATCT +
Preference number: 4 (lower is better)
Translates to: YIKSDMVSEMEVMCWRATHHLRR*PSWMES
Trigger: AGATTCCATCCATGATGGCCAGCGCCTCAGATGATG...GGTTGCCCTCCAACACATTACTTCCATTTCAGAAACCATATCTGATTTAATATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000480676.2
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp TCAGATATGGTTTCTGAAATGGAAGTAATGTGTTGGAGGGCAACCCAAAAGGACGTCTATAAAAGGTGCTaGTCCCCATATTCTAACAGT +
Preference number: 4 (lower is better)
Translates to: SDMVSEMEVMCWRATQKDVYKRC*SPYSNS
Trigger: ACTGTTAGAATATGGGGACCAGCACCTTTTATAGAC...GTCCTTTTGGGTTGCCCTCCAACACATTACTTCCATTTCAGAAACCATATCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000480676.2
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp TACACAGAAGAGCAACAAGAATGGTATCCTGCCAGACAAAAGACAGGAAGGAAAGTCTATAAAAGGTGCTaGTCCCCATATTCTAACAGT +
Preference number: 4 (lower is better)
Translates to: YTEEQQEWYPARQKTGRKVYKRC*SPYSNS
Trigger: ACTGTTAGAATATGGGGACCAGCACCTTTTATAGAC...TTTCCTTCCTGTCTTTTGTCTGGCAGGATACCATTCTTGTTGCTCTTCTGTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp GTTACTATGAAGCAAGGTGTAAATGTTTGGCCCCAATCGGGCTTCAGAAATGGTTCTTCAATATTCTGGTaGTCTATAAAAGGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: VTMKQGVNVWPQSGFRNGSSIFW*SIKGAG
Trigger: ACCAGCACCTTTTATAGACCACCAGAATATTGAAGA...ACCATTTCTGAAGCCCGATTGGGGCCAAACATTTACACCTTGCTTCATAGTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp TCCTATCCAATGTATACTCTTCAGACTAATGCACTCTTTCTATCAAGCCTTCTACAAGGTGTAAATGTTTaGCCCCAATCGGGCTTCAGA +
Preference number: 4 (lower is better)
Translates to: SYPMYTLQTNALFLSSLLQGVNV*PQSGFR
Trigger: TCTGAAGCCCGATTGGGGCCAAACATTTACACCTTG...TAGAAGGCTTGATAGAAAGAGTGCATTAGTCTGAAGAGTATACATTGGATAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp GTGGTTGTATCGCTGATTCCTACTCTTTTGCTAGATCACACCAAAATTACTTCCGTTCTTCACAACCGATaGGGGAATAATTCAACATGG +
Preference number: 4 (lower is better)
Translates to: VVVSLIPTLLLDHTKITSVLHNR*GNNSTW
Trigger: CCATGTTGAATTATTCCCCCATCGGTTGTGAAGAAC...GGAAGTAATTTTGGTGTGATCTAGCAAAAGAGTAGGAATCAGCGATACAACCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp TTAAGACAGACCCGGAAAACAAACTCACCTAGCTGCTATAGAAACCTTTGCATAGAAGAGCAACAAGAATaGTATCCTGCCAGACAAAAG +
Preference number: 4 (lower is better)
Translates to: LRQTRKTNSPSCYRNLCIEEQQE*YPARQK
Trigger: CTTTTGTCTGGCAGGATACCATTCTTGTTGCTCTTC...TATGCAAAGGTTTCTATAGCAGCTAGGTGAGTTTGTTTTCCGGGTCTGTCTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp AAGGCTAGAATCCATGAACCAAGCTGCAAAGATCTCAAGCTAAATAAGGCGGAACACTGGTTTATCATCTaGATCAGTATATACTGCGCA +
Preference number: 4 (lower is better)
Translates to: KARIHEPSCKDLKLNKAEHWFII*ISIYCA
Trigger: TGCGCAGTATATACTGATCCAGATGATAAACCAGTG...TTCCGCCTTATTTAGCTTGAGATCTTTGCAGCTTGGTTCATGGATTCTAGCCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp ATGACGAGCATGTCTGTCCAGCTATCAATCATGTTTGTTTGCACCAAATCCCAACACTGGTTTATCATCTaGATCAGTATATACTGCGCA +
Preference number: 4 (lower is better)
Translates to: MTSMSVQLSIMFVCTKSQHWFII*ISIYCA
Trigger: TGCGCAGTATATACTGATCCAGATGATAAACCAGTG...TTGGGATTTGGTGCAAACAAACATGATTGATAGCTGGACAGACATGCTCGTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp AGTACCAGTATGTACAGGAAGCTGCCAGTTAAGACAGACCCGGAAAACAAACTCTCTCTTTGTGGATTCTaGAGTCTATTCATGATCATA +
Preference number: 4 (lower is better)
Translates to: STSMYRKLPVKTDPENKLSLCGF*SLFMII
Trigger: TATGATCATGAATAGACTCCAGAATCCACAAAGAGA...GAGTTTGTTTTCCGGGTCTGTCTTAACTGGCAGCTTCCTGTACATACTGGTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp TCAACTGGTTACTATGAAGCAAGGTGTAAATGTTTGGCCCCAATCGGGCTTCAGTCTCTTTGTGGATTCTaGAGTCTATTCATGATCATA +
Preference number: 4 (lower is better)
Translates to: STGYYEARCKCLAPIGLQSLCGF*SLFMII
Trigger: TATGATCATGAATAGACTCCAGAATCCACAAAGAGA...CTGAAGCCCGATTGGGGCCAAACATTTACACCTTGCTTCATAGTAACCAGTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp TTCACTGGTTTATCATCTGGATCAGTATATACTGCGCAACGGGCAAGGCTAGAATTTACTATGGGCTTCTaGGAGAATGCATGCTATTTT +
Preference number: 4 (lower is better)
Translates to: FTGLSSGSVYTAQRARLEFTMGF*ENACYF
Trigger: AAAATAGCATGCATTCTCCCAGAAGCCCATAGTAAA...TTCTAGCCTTGCCCGTTGCGCAGTATATACTGATCCAGATGATAAACCAGTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp GAACCAAGCTGCAAAGATCTCAAGCTAAATAAGGCGGAAAGATTTGGAGAAACATGTTACCATAGAGACTaGGGTGTATTAACGGCTTCA +
Preference number: 4 (lower is better)
Translates to: EPSCKDLKLNKAERFGETCYHRD*GVLTAS
Trigger: TGAAGCCGTTAATACACCCCAGTCTCTATGGTAACA...TGTTTCTCCAAATCTTTCCGCCTTATTTAGCTTGAGATCTTTGCAGCTTGGTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp GTTTCTGACCATGTCTCATGTGGTATTCCAGAAGAGCATCAGTTATACTGTGTATGTTACCATAGAGACTaGGGTGTATTAACGGCTTCA +
Preference number: 4 (lower is better)
Translates to: VSDHVSCGIPEEHQLYCVCYHRD*GVLTAS
Trigger: TGAAGCCGTTAATACACCCCAGTCTCTATGGTAACA...TACACAGTATAACTGATGCTCTTCTGGAATACCACATGAGACATGGTCAGAAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp GTGGATCTATTCCCCTCGCCACACACACACATTTTCAAGGAGCCAATAACATTTATTTGTAAACAGCTGTaGAGTTTCTATGCCCACATT +
Preference number: 4 (lower is better)
Translates to: VDLFPSPHTHIFKEPITFICKQL*SFYAHI
Trigger: AATGTGGGCATAGAAACTCCACAGCTGTTTACAAAT...AAATGTTATTGGCTCCTTGAAAATGTGTGTGTGTGGCGAGGGGAATAGATCCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp TTTTTCATGACGAGCATGTCTGTCCAGCTATCAATCATGTTTGTTTGCACCAAAACATACATGCTTTTGTaGATCTATTCCCCTCGCCAC +
Preference number: 4 (lower is better)
Translates to: FFMTSMSVQLSIMFVCTKTYMLL*IYSPRH
Trigger: GTGGCGAGGGGAATAGATCCACAAAAGCATGTATGT...TTTGGTGCAAACAAACATGATTGATAGCTGGACAGACATGCTCGTCATGAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp GTTCACTGGTTTATCATCTGGATCAGTATATACTGCGCAACGGGCAAGGCTAGATTGATCTCTACAGCTTaGTTTGTAAGTACATACATG +
Preference number: 4 (lower is better)
Translates to: VHWFIIWISIYCATGKARLISTA*FVSTYM
Trigger: CATGTATGTACTTACAAACCAAGCTGTAGAGATCAA...TCTAGCCTTGCCCGTTGCGCAGTATATACTGATCCAGATGATAAACCAGTGAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp GCACAGTTCTTCACAACCGATGGGGGAATAATTCAACATGGTGTCCAACAACGTTTGATCTCTACAGCTTaGTTTGTAAGTACATACATG +
Preference number: 4 (lower is better)
Translates to: AQFFTTDGGIIQHGVQQRLISTA*FVSTYM
Trigger: CATGTATGTACTTACAAACCAAGCTGTAGAGATCAA...ACGTTGTTGGACACCATGTTGAATTATTCCCCCATCGGTTGTGAAGAACTGTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp TGTAGCACAGTTCTTCACAACCGATGGGGGAATAATTCAACATGGTGTCCAACAAGTCTACTACAAACATaGTCTATAAGCAGAGACACA +
Preference number: 4 (lower is better)
Translates to: CSTVLHNRWGNNSTWCPTSLLQT*SISRDT
Trigger: TGTGTCTCTGCTTATAGACCATGTTTGTAGTAGACT...TGTTGGACACCATGTTGAATTATTCCCCCATCGGTTGTGAAGAACTGTGCTACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486652.5
CDS-3UTR TCA 90 bp CCAATGTATACTCTTCAGACTAATGCACTCTTTCTATCAAGCCTTCTAAACTGTCTTACCACAATAGCATaGGGAGAATGCACTAAAGGC +
Preference number: 4 (lower is better)
Translates to: PMYTLQTNALFLSSLLNCLTTIA*GECTKG
Trigger: GCCTTTAGTGCATTCTCCTCATGCTATTGTGGTAAG...ACAGTTTAGAAGGCTTGATAGAAAGAGTGCATTAGTCTGAAGAGTATACATTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp CCAAGCTGCAAAGATCTCAAGCTAAATAAGGCGGAAAGATTTGGAGAAACAAAATCAAGTTTGGTATTGTaGTATAGGCACCGATCCCTT +
Preference number: 4 (lower is better)
Translates to: PSCKDLKLNKAERFGETKSSLVL*YRHRSL
Trigger: AAGGGATCGGTGCCTATATCACAATACCAAACTTGA...TTTTGTTTCTCCAAATCTTTCCGCCTTATTTAGCTTGAGATCTTTGCAGCTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp AAATATACCAGTATTAACCAAACCTTAAACTCAGAGGGCACTTCACATGTGCACGTCAAACTGTCTTCATaGGACTGGCTCATTTTTGTC +
Preference number: 4 (lower is better)
Translates to: KYTSINQTLNSEGTSHVHVKLSS*DWLIFV
Trigger: GACAAAAATGAGCCAGTCTCATGAAGACAGTTTGAC...GTGCACATGTGAAGTGCCCTCTGAGTTTAAGGTTTGGTTAATACTGGTATATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000480676.2
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp TCCTATCCAATGTATACTCTTCAGACTAATGCACTCTTTCTATCAAGCCTTCTATCCAAGCACTGTTTCTaGCCATGTCTCATGTGGTAT +
Preference number: 4 (lower is better)
Translates to: SYPMYTLQTNALFLSSLLSKHCF*PCLMWY
Trigger: ATACCACATGAGACATGGTCAGAAACAGTGCTTGGA...TAGAAGGCTTGATAGAAAGAGTGCATTAGTCTGAAGAGTATACATTGGATAGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp GTGGTTGTATCGCTGATTCCTACTCTTTTGCTAGATCACACCAAAATTACTTCCAAACCAACTGACTACTaGTGTCTCATGTTGGTGTAT +
Preference number: 4 (lower is better)
Translates to: VVVSLIPTLLLDHTKITSKPTDY*CLMLVY
Trigger: ATACACCAACATGAGACATCAGTAGTCAGTTGGTTT...GGAAGTAATTTTGGTGTGATCTAGCAAAAGAGTAGGAATCAGCGATACAACCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp AATGGAAGTAATGTGTTGGAGGGCAACCCAAAAGGACAGTTGCGAAATTATGAAAAACCAACTGACTACTaGTGTCTCATGTTGGTGTAT +
Preference number: 4 (lower is better)
Translates to: NGSNVLEGNPKGQLRNYEKPTDY*CLMLVY
Trigger: ATACACCAACATGAGACATCAGTAGTCAGTTGGTTT...TTCATAATTTCGCAACTGTCCTTTTGGGTTGCCCTCCAACACATTACTTCCATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp GTAAGCCTGAATGTAGCACAGTTCTTCACAACCGATGGGGGAATAATTCAACATTTACTGAAAACCAACTaGCTACTGATGTCTCATGTT +
Preference number: 4 (lower is better)
Translates to: VSLNVAQFFTTDGGIIQHLLKTN*LLMSHV
Trigger: AACATGAGACATCAGTAGTCAGTTGGTTTTCAGTAA...ATGTTGAATTATTCCCCCATCGGTTGTGAAGAACTGTGCTACATTCAGGCTTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp ATGACGAGCATGTCTGTCCAGCTATCAATCATGTTTGTTTGCACCAAATCCCAATTACTGAAAACCAACTaGCTACTGATGTCTCATGTT +
Preference number: 4 (lower is better)
Translates to: MTSMSVQLSIMFVCTKSQLLKTN*LLMSHV
Trigger: AACATGAGACATCAGTAGTCAGTTGGTTTTCAGTAA...TTGGGATTTGGTGCAAACAAACATGATTGATAGCTGGACAGACATGCTCGTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp AGCATGTCTGTCCAGCTATCAATCATGTTTGTTTGCACCAAATCCCAAGCCATTAATTACTTCCTAAGTTaGGAACAACTTGGAACAAGC +
Preference number: 4 (lower is better)
Translates to: SMSVQLSIMFVCTKSQAINYFLS*EQLGTS
Trigger: GCTTGTTCCAAGTTGTTCTCAACTTAGGAAGTAATT...AATGGCTTGGGATTTGGTGCAAACAAACATGATTGATAGCTGGACAGACATGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp AGCACTGTTTCTGACCATGTCTCATGTGGTATTCCAGAAGAGCATCAGTTATACCTATTTATCCTCTACTaGAAAAGGGAGGGAATTTCA +
Preference number: 4 (lower is better)
Translates to: STVSDHVSCGIPEEHQLYLFILY*KREGIS
Trigger: TGAAATTCCCTCCCTTTTTCAGTAGAGGATAAATAG...GTATAACTGATGCTCTTCTGGAATACCACATGAGACATGGTCAGAAACAGTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp GTAAGCCTGAATGTAGCACAGTTCTTCACAACCGATGGGGGAATAATTCAACATCTATTTATCCTCTACTaGAAAAGGGAGGGAATTTCA +
Preference number: 4 (lower is better)
Translates to: VSLNVAQFFTTDGGIIQHLFILY*KREGIS
Trigger: TGAAATTCCCTCCCTTTTTCAGTAGAGGATAAATAG...ATGTTGAATTATTCCCCCATCGGTTGTGAAGAACTGTGCTACATTCAGGCTTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp TTCCAAAGTGGTTGTATCGCTGATTCCTACTCTTTTGCTAGATCACACCAAAATCAATGGAAGAATTTTTaGCATCCAAGCCCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: FQSGCIADSYSFARSHQNQWKNF*HPSPLL
Trigger: GAGAAGAGGGCTTGGATGTCAAAAATTCTTCCATTG...ATTTTGGTGTGATCTAGCAAAAGAGTAGGAATCAGCGATACAACCACTTTGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp AGCTGCAAAGATCTCAAGCTAAATAAGGCGGAAAGATTTGGAGAAACAAAAGAAACTTCAGAAGCACTCTaGAAACTCAGATCTAGGGGT +
Preference number: 4 (lower is better)
Translates to: SCKDLKLNKAERFGETKETSEAL*KLRSRG
Trigger: ACCCCTAGATCTGAGTTTTCAGAGTGCTTCTGAAGT...TTCTTTTGTTTCTCCAAATCTTTCCGCCTTATTTAGCTTGAGATCTTTGCAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp TATATTAAATCAGATATGGTTTCTGAAATGGAAGTAATGTGTTGGAGGGCAACCTATATTTACCCACTGTaGGGCAGAGGTGATAGGGTC +
Preference number: 4 (lower is better)
Translates to: YIKSDMVSEMEVMCWRATYIYPL*GRGDRV
Trigger: GACCCTATCACCTCTGCCTCACAGTGGGTAAATATA...GGTTGCCCTCCAACACATTACTTCCATTTCAGAAACCATATCTGATTTAATATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000480676.2
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp TTTCATGACGAGCATGTCTGTCCAGCTATCAATCATGTTTGTTTGCACCAAATCATTAGAAACAGGATCTaGGAGATAATAGCTGCCCTT +
Preference number: 4 (lower is better)
Translates to: FHDEHVCPAINHVCLHQIIRNRI*EIIAAL
Trigger: AAGGGCAGCTATTATCTCTCAGATCCTGTTTCTAAT...GATTTGGTGCAAACAAACATGATTGATAGCTGGACAGACATGCTCGTCATGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486652.5
CDS-3UTR GCA 90 bp AAATATACCAGTATTAACCAAACCTTAAACTCAGAGGGCACTTCACATGTGCACCCTAAGCCATTCAAGTaGTGTCCTATTAGCCTAATG +
Preference number: 4 (lower is better)
Translates to: KYTSINQTLNSEGTSHVHPKPFK*CPISLM
Trigger: CATTAGGCTAATAGGACAGCACTTGAATGGCTTAGG...GTGCACATGTGAAGTGCCCTCTGAGTTTAAGGTTTGGTTAATACTGGTATATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp GTGGTTGTATCGCTGATTCCTACTCTTTTGCTAGATCACACCAAAATTACTTCCTATTCTAGGTACTTCTaGTGCAGCAGCAAAAACTTC +
Preference number: 4 (lower is better)
Translates to: VVVSLIPTLLLDHTKITSYSRYF*CSSKNF
Trigger: GAAGTTTTTGCTGCTGCAGCAGAAGTACCTAGAATA...GGAAGTAATTTTGGTGTGATCTAGCAAAAGAGTAGGAATCAGCGATACAACCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp TACACAGAAGAGCAACAAGAATGGTATCCTGCCAGACAAAAGACAGGAAGGAAAGTATCCGGATCAACTTaGCATATGATAACTGTTGTA +
Preference number: 4 (lower is better)
Translates to: YTEEQQEWYPARQKTGRKVSGST*HMITVV
Trigger: TACAACAGTTATCATATGGCAAGTTGATCCGGATAC...TTTCCTTCCTGTCTTTTGTCTGGCAGGATACCATTCTTGTTGCTCTTCTGTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp GTGCACGAGACTTTCAGTAAAAATGACAAGATCCTAGAACAGCTGTTTCCAGGAGTATCCGGATCAACTTaGCATATGATAACTGTTGTA +
Preference number: 4 (lower is better)
Translates to: VHETFSKNDKILEQLFPGVSGST*HMITVV
Trigger: TACAACAGTTATCATATGGCAAGTTGATCCGGATAC...TCCTGGAAACAGCTGTTCTAGGATCTTGTCATTTTTACTGAAAGTCTCGTGCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000480676.2
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp AGCATGTCTGTCCAGCTATCAATCATGTTTGTTTGCACCAAATCCCAAGCCATTGTATCCGGATCAACTTaGCATATGATAACTGTTGTA +
Preference number: 4 (lower is better)
Translates to: SMSVQLSIMFVCTKSQAIVSGST*HMITVV
Trigger: TACAACAGTTATCATATGGCAAGTTGATCCGGATAC...AATGGCTTGGGATTTGGTGCAAACAAACATGATTGATAGCTGGACAGACATGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp AGCACTGTTTCTGACCATGTCTCATGTGGTATTCCAGAAGAGCATCAGTTATACTCAATCATGTTTGTTTaGACCAAATCCCAAGCCATT +
Preference number: 4 (lower is better)
Translates to: STVSDHVSCGIPEEHQLYSIMFV*TKSQAI
Trigger: AATGGCTTGGGATTTGGTGCAAACAAACATGATTGA...GTATAACTGATGCTCTTCTGGAATACCACATGAGACATGGTCAGAAACAGTGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp AACAAGATAGTTGTCATCTGGACTCCATGCAATATAAGAAACGCCATAAGCATGAACGTTCTAACGACGTaGTTCATCTCAACTGGTTAC +
Preference number: 4 (lower is better)
Translates to: NKIVVIWTPCNIRNAISMNVLTT*FISTGY
Trigger: GTAACCAGTTGAGATGAAGCACGTCGTTAGAACGTT...CATGCTTATGGCGTTTCTTATATTGCATGGAGTCCAGATGACAACTATCTTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486652.5
CDS-3UTR GCA 90 bp GTAAGCCTGAATGTAGCACAGTTCTTCACAACCGATGGGGGAATAATTCAACATATCCATGAACCAAGCTaGAAAGATCTCAAGCTAAAT +
Preference number: 4 (lower is better)
Translates to: VSLNVAQFFTTDGGIIQHIHEPS*KDLKLN
Trigger: ATTTAGCTTGAGATCTTTGCAGCTTGGTTCATGGAT...ATGTTGAATTATTCCCCCATCGGTTGTGAAGAACTGTGCTACATTCAGGCTTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp GTTACTATGAAGCAAGGTGTAAATGTTTGGCCCCAATCGGGCTTCAGAAATGGTTGTTCTTGTAAAATGTaGCTCACTTTTACTCCACTT +
Preference number: 4 (lower is better)
Translates to: VTMKQGVNVWPQSGFRNGCSCKM*LTFTPL
Trigger: AAGTGGAGTAAAAGTGAGGCACATTTTACAAGAACA...ACCATTTCTGAAGCCCGATTGGGGCCAAACATTTACACCTTGCTTCATAGTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp GTGGATCTATTCCCCTCGCCACACACACACATTTTCAAGGAGCCAATAACATTTTGTTCTTGTAAAATGTaGCTCACTTTTACTCCACTT +
Preference number: 4 (lower is better)
Translates to: VDLFPSPHTHIFKEPITFCSCKM*LTFTPL
Trigger: AAGTGGAGTAAAAGTGAGGCACATTTTACAAGAACA...AAATGTTATTGGCTCCTTGAAAATGTGTGTGTGTGGCGAGGGGAATAGATCCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp GACATAGTTCACTGGTTTATCATCTGGATCAGTATATACTGCGCAACGGGCAAGTGTTCTTGTAAAATGTaGCTCACTTTTACTCCACTT +
Preference number: 4 (lower is better)
Translates to: DIVHWFIIWISIYCATGKCSCKM*LTFTPL
Trigger: AAGTGGAGTAAAAGTGAGGCACATTTTACAAGAACA...CTTGCCCGTTGCGCAGTATATACTGATCCAGATGATAAACCAGTGAACTATGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp CTGAATGTAGCACAGTTCTTCACAACCGATGGGGGAATAATTCAACATGGTGTCTGCTATAGAAACCTTTaGATAGTTGTTACTCCGTTT +
Preference number: 4 (lower is better)
Translates to: LNVAQFFTTDGGIIQHGVCYRNL*IVVTPF
Trigger: AAACGGAGTAACAACTATGCAAAGGTTTCTATAGCA...GACACCATGTTGAATTATTCCCCCATCGGTTGTGAAGAACTGTGCTACATTCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp TTCCAAAGTGGTTGTATCGCTGATTCCTACTCTTTTGCTAGATCACACCAAAATGGGTCAGTTCTTGTTTaGAGGAACCAACATCCTAAA +
Preference number: 4 (lower is better)
Translates to: FQSGCIADSYSFARSHQNGSVLV*RNQHPK
Trigger: TTTAGGATGTTGGTTCCTGCAAACAAGAACTGACCC...ATTTTGGTGTGATCTAGCAAAAGAGTAGGAATCAGCGATACAACCACTTTGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp GAGACTTTCAGTAAAAATGACAAGATCCTAGAACAGCTGTTTCCAGGACTTTTTAAACGACTGGTTAAGTaGTGCGCACTGACATGGAAA +
Preference number: 4 (lower is better)
Translates to: ETFSKNDKILEQLFPGLFKRLVK*CALTWK
Trigger: TTTCCATGTCAGTGCGCAGCACTTAACCAGTCGTTT...AAAAAGTCCTGGAAACAGCTGTTCTAGGATCTTGTCATTTTTACTGAAAGTCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp GTAAGCCTGAATGTAGCACAGTTCTTCACAACCGATGGGGGAATAATTCAACATTTCAGAAAATGTTTGTaGCACAATAGCATGAGGAGA +
Preference number: 4 (lower is better)
Translates to: VSLNVAQFFTTDGGIIQHFRKCL*HNSMRR
Trigger: TCTCCTCATGCTATTGTGGCACAAACATTTTCTGAA...ATGTTGAATTATTCCCCCATCGGTTGTGAAGAACTGTGCTACATTCAGGCTTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486652.5
CDS-3UTR CCA 90 bp ACCAGTCTACTACAAACATGGTCTATAAGCAGAGACACAGAATCTAGATTATTACGTAGGTCTTCTGCATaGCTACACATCAGATACCCA +
Preference number: 4 (lower is better)
Translates to: TSLLQTWSISRDTESRLLRRSSA*LHIRYP
Trigger: TGGGTATCTGATGTGTAGCCATGCAGAAGACCTACG...TAATAATCTAGATTCTGTGTCTCTGCTTATAGACCATGTTTGTAGTAGACTGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486652.5
CDS-3UTR CCA 90 bp GACTTGGCTACACCTAAAGGGGAACTTAGTACAAGACTTTTTCTTCACCAGAATCTCCTACTACAAACATaGTCTATAAGCAGAGACACA +
Preference number: 4 (lower is better)
Translates to: DLATPKGELSTRLFLHQNLLLQT*SISRDT
Trigger: TGTGTCTCTGCTTATAGACCATGTTTGTAGTAGGAG...ATTCTGGTGAAGAAAAAGTCTTGTACTAAGTTCCCCTTTAGGTGTAGCCAAGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp TGTAGCACAGTTCTTCACAACCGATGGGGGAATAATTCAACATGGTGTCCAACAAAGATAGTTGTCATCTaGACTCCATGCAATATAAGA +
Preference number: 4 (lower is better)
Translates to: CSTVLHNRWGNNSTWCPTKIVVI*TPCNIR
Trigger: TCTTATATTGCATGGAGTCCAGATGACAACTATCTT...TGTTGGACACCATGTTGAATTATTCCCCCATCGGTTGTGAAGAACTGTGCTACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp GTGCACGAGACTTTCAGTAAAAATGACAAGATCCTAGAACAGCTGTTTCCAGGATCTTCAATATTCTGGTaGTCTATAAAAGGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: VHETFSKNDKILEQLFPGSSIFW*SIKGAG
Trigger: ACCAGCACCTTTTATAGACCACCAGAATATTGAAGA...TCCTGGAAACAGCTGTTCTAGGATCTTGTCATTTTTACTGAAAGTCTCGTGCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000480676.2
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp TTCTTGTACTATGTTCCTATCTGTAAGGTCCTCGAAGTTATAGCCCCGAATTCGTCTTCAATATTCTGGTaGTCTATAAAAGGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: FLYYVPICKVLEVIAPNSSSIFW*SIKGAG
Trigger: ACCAGCACCTTTTATAGACCACCAGAATATTGAAGA...CGAATTCGGGGCTATAACTTCGAGGACCTTACAGATAGGAACATAGTACAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486652.5
CDS-3UTR CCA 90 bp GTGCACGAGACTTTCAGTAAAAATGACAAGATCCTAGAACAGCTGTTTCCAGGATCCTCTTCAATATTCTaGTGGTCTATAAAAGGTGCT +
Preference number: 4 (lower is better)
Translates to: VHETFSKNDKILEQLFPGSSSIF*WSIKGA
Trigger: AGCACCTTTTATAGACCACCAGAATATTGAAGAGGA...TCCTGGAAACAGCTGTTCTAGGATCTTGTCATTTTTACTGAAAGTCTCGTGCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000480676.2
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp GACATAGTTCACTGGTTTATCATCTGGATCAGTATATACTGCGCAACGGGCAAGTTTGACATAGTTCACTaGTTTATCATCTGGATCAGT +
Preference number: 4 (lower is better)
Translates to: DIVHWFIIWISIYCATGKFDIVH*FIIWIS
Trigger: ACTGATCCAGATGATAAACCAGTGAACTATGTCAAA...CTTGCCCGTTGCGCAGTATATACTGATCCAGATGATAAACCAGTGAACTATGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp TTCCAAAGTGGTTGTATCGCTGATTCCTACTCTTTTGCTAGATCACACCAAAATGCCCTCTTCTCTTTGTaGATTCTGGAGTCTATTCAT +
Preference number: 4 (lower is better)
Translates to: FQSGCIADSYSFARSHQNALFSL*ILESIH
Trigger: ATGAATAGACTCCAGAATCCACAAAGAGAAGAGGGC...ATTTTGGTGTGATCTAGCAAAAGAGTAGGAATCAGCGATACAACCACTTTGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp TTTTTCATGACGAGCATGTCTGTCCAGCTATCAATCATGTTTGTTTGCACCAAAAGCACAGTCACTGCATaGCAAATGTATGAAACAGAC +
Preference number: 4 (lower is better)
Translates to: FFMTSMSVQLSIMFVCTKSTVTA*QMYETD
Trigger: GTCTGTTTCATACATTTGCCATGCAGTGACTGTGCT...TTTGGTGCAAACAAACATGATTGATAGCTGGACAGACATGCTCGTCATGAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp AGCACTGTTTCTGACCATGTCTCATGTGGTATTCCAGAAGAGCATCAGTTATACTTAGTATCTTGTGGCTaGCTTCATAGTATAAGACTC +
Preference number: 4 (lower is better)
Translates to: STVSDHVSCGIPEEHQLYLVSCG*LHSIRL
Trigger: GAGTCTTATACTATGAAGCCAGCCACAAGATACTAA...GTATAACTGATGCTCTTCTGGAATACCACATGAGACATGGTCAGAAACAGTGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp AGCATGTCTGTCCAGCTATCAATCATGTTTGTTTGCACCAAATCCCAAGCCATTTTAGTATCTTGTGGCTaGCTTCATAGTATAAGACTC +
Preference number: 4 (lower is better)
Translates to: SMSVQLSIMFVCTKSQAILVSCG*LHSIRL
Trigger: GAGTCTTATACTATGAAGCCAGCCACAAGATACTAA...AATGGCTTGGGATTTGGTGCAAACAAACATGATTGATAGCTGGACAGACATGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp AGCTGCAAAGATCTCAAGCTAAATAAGGCGGAAAGATTTGGAGAAACAAAAGAAATGGAAGTAATGTGTTaGAGGGCAACCCAAAAGGAC +
Preference number: 4 (lower is better)
Translates to: SCKDLKLNKAERFGETKEMEVMC*RATQKD
Trigger: GTCCTTTTGGGTTGCCCTCCAACACATTACTTCCAT...TTCTTTTGTTTCTCCAAATCTTTCCGCCTTATTTAGCTTGAGATCTTTGCAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp CCAATGTATACTCTTCAGACTAATGCACTCTTTCTATCAAGCCTTCTAAACTGTATGGAAGTAATGTGTTaGAGGGCAACCCAAAAGGAC +
Preference number: 4 (lower is better)
Translates to: PMYTLQTNALFLSSLLNCMEVMC*RATQKD
Trigger: GTCCTTTTGGGTTGCCCTCCAACACATTACTTCCAT...ACAGTTTAGAAGGCTTGATAGAAAGAGTGCATTAGTCTGAAGAGTATACATTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp CCAAGCTGCAAAGATCTCAAGCTAAATAAGGCGGAAAGATTTGGAGAAACAAAATACCCACTAAGAACATaGATGCGCTCTGTATTGTAT +
Preference number: 4 (lower is better)
Translates to: PSCKDLKLNKAERFGETKYPLRT*MRSVLY
Trigger: ATACAATACAGAGCGCATTCATGTTCTTAGTGGGTA...TTTTGTTTCTCCAAATCTTTCCGCCTTATTTAGCTTGAGATCTTTGCAGCTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp TTCCAAAGTGGTTGTATCGCTGATTCCTACTCTTTTGCTAGATCACACCAAAATTACCCACTAAGAACATaGATGCGCTCTGTATTGTAT +
Preference number: 4 (lower is better)
Translates to: FQSGCIADSYSFARSHQNYPLRT*MRSVLY
Trigger: ATACAATACAGAGCGCATTCATGTTCTTAGTGGGTA...ATTTTGGTGTGATCTAGCAAAAGAGTAGGAATCAGCGATACAACCACTTTGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp ACTAACCTGATTTTTGGAGCCCAAATTCTCCACTCTATTTTGATCTATGTGCAATCAAGTTTGGTATTGTaGTATAGGCACCGATCCCTT +
Preference number: 4 (lower is better)
Translates to: TNLIFGAQILHSILIYVQSSLVL*YRHRSL
Trigger: AAGGGATCGGTGCCTATATCACAATACCAAACTTGA...TTGCACATAGATCAAAATAGAGTGGAGAATTTGGGCTCCAAAAATCAGGTTAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp CCAATGTATACTCTTCAGACTAATGCACTCTTTCTATCAAGCCTTCTAAACTGTGTCAAACTGTCTTCATaGGACTGGCTCATTTTTGTC +
Preference number: 4 (lower is better)
Translates to: PMYTLQTNALFLSSLLNCVKLSS*DWLIFV
Trigger: GACAAAAATGAGCCAGTCTCATGAAGACAGTTTGAC...ACAGTTTAGAAGGCTTGATAGAAAGAGTGCATTAGTCTGAAGAGTATACATTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp AATGGAAGTAATGTGTTGGAGGGCAACCCAAAAGGACAGTTGCGAAATTATGAATTTAAAAGCACAATGTaGACATCAGGCTTTTGGCTT +
Preference number: 4 (lower is better)
Translates to: NGSNVLEGNPKGQLRNYEFKSTM*TSGFWL
Trigger: AAGCCAAAAGCCTGATGTTCACATTGTGCTTTTAAA...TTCATAATTTCGCAACTGTCCTTTTGGGTTGCCCTCCAACACATTACTTCCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp CCAATGTATACTCTTCAGACTAATGCACTCTTTCTATCAAGCCTTCTAAACTGTTTGATAAGAGTCTGCTaGCCACGATCTGTCATTTTC +
Preference number: 4 (lower is better)
Translates to: PMYTLQTNALFLSSLLNCLIRVC*PRSVIF
Trigger: GAAAATGACAGATCGTGGTCAGCAGACTCTTATCAA...ACAGTTTAGAAGGCTTGATAGAAAGAGTGCATTAGTCTGAAGAGTATACATTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp ACTAACCTGATTTTTGGAGCCCAAATTCTCCACTCTATTTTGATCTATGTGCAAATGAGCCTACTAACCTaGTTTTTGGAGCCCAAATTC +
Preference number: 4 (lower is better)
Translates to: TNLIFGAQILHSILIYVQMSLLT*FLEPKF
Trigger: GAATTTGGGCTCCAAAAATCAGGTTAGTAGGCTCAT...TTGCACATAGATCAAAATAGAGTGGAGAATTTGGGCTCCAAAAATCAGGTTAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp GTTTCTGACCATGTCTCATGTGGTATTCCAGAAGAGCATCAGTTATACTGTGTACTTAAGTTCTTTTCTTaGTCTCTACAGCTTGGTTTG +
Preference number: 4 (lower is better)
Translates to: VSDHVSCGIPEEHQLYCVLKFFS*SLQLGL
Trigger: CAAACCAAGCTGTAGAGATCAAGAAAAGAACTTAAG...TACACAGTATAACTGATGCTCTTCTGGAATACCACATGAGACATGGTCAGAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp GTGGTTGTATCGCTGATTCCTACTCTTTTGCTAGATCACACCAAAATTACTTCCCTTAAGTTCTTTTCTTaGTCTCTACAGCTTGGTTTG +
Preference number: 4 (lower is better)
Translates to: VVVSLIPTLLLDHTKITSLKFFS*SLQLGL
Trigger: CAAACCAAGCTGTAGAGATCAAGAAAAGAACTTAAG...GGAAGTAATTTTGGTGTGATCTAGCAAAAGAGTAGGAATCAGCGATACAACCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp CTCTCTCTCACACACACACAGAACACACACACACATTTTTATACTATTGGTTTTTTAAGTGCTGCGCACTaGCATGGAAAAAGTGTCTTT +
Preference number: 4 (lower is better)
Translates to: LSLTHTQNTHTHFYTIGFLSAAH*HGKSVF
Trigger: AAAGACACTTTTTCCATGTCAGTGCGCAGCACTTAA...AAAACCAATAGTATAAAAATGTGTGTGTGTGTTCTGTGTGTGTGTGAGAGAGAG
39% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp CAGCTATCAATCATGTTTGTTTGCACCAAATCCCAAGCCATTAAAATACGACTATTAAGTGCTGCGCACTaGCATGGAAAAAGTGTCTTT +
Preference number: 4 (lower is better)
Translates to: QLSIMFVCTKSQAIKIRLLSAAH*HGKSVF
Trigger: AAAGACACTTTTTCCATGTCAGTGCGCAGCACTTAA...TAGTCGTATTTTAATGGCTTGGGATTTGGTGCAAACAAACATGATTGATAGCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp TCCTATCCAATGTATACTCTTCAGACTAATGCACTCTTTCTATCAAGCCTTCTACCTAAGCCATTCAAGTaGTGTCCTATTAGCCTAATG +
Preference number: 4 (lower is better)
Translates to: SYPMYTLQTNALFLSSLLPKPFK*CPISLM
Trigger: CATTAGGCTAATAGGACAGCACTTGAATGGCTTAGG...TAGAAGGCTTGATAGAAAGAGTGCATTAGTCTGAAGAGTATACATTGGATAGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp AGCTGCAAAGATCTCAAGCTAAATAAGGCGGAAAGATTTGGAGAAACAAAAGAATTGAGAGATTTCAAGTaGGCCTCTTACCACAATAGC +
Preference number: 4 (lower is better)
Translates to: SCKDLKLNKAERFGETKELRDFK*ASYHNS
Trigger: GCTATTGTGGTAAGAGGCGCACTTGAAATCTCTCAA...TTCTTTTGTTTCTCCAAATCTTTCCGCCTTATTTAGCTTGAGATCTTTGCAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp GAGACTTTCAGTAAAAATGACAAGATCCTAGAACAGCTGTTTCCAGGACTTTTTTTGAGAGATTTCAAGTaGGCCTCTTACCACAATAGC +
Preference number: 4 (lower is better)
Translates to: ETFSKNDKILEQLFPGLFLRDFK*ASYHNS
Trigger: GCTATTGTGGTAAGAGGCGCACTTGAAATCTCTCAA...AAAAAGTCCTGGAAACAGCTGTTCTAGGATCTTGTCATTTTTACTGAAAGTCTC
39% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000414423.9
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp AGCTGCAAAGATCTCAAGCTAAATAAGGCGGAAAGATTTGGAGAAACAAAAGAATCTAGGTACTTCTGCTaGAGCAGCAAAAACTTCATC +
Preference number: 4 (lower is better)
Translates to: SCKDLKLNKAERFGETKESRYFC*SSKNFI
Trigger: GATGAAGTTTTTGCTGCTGCAGCAGAAGTACCTAGA...TTCTTTTGTTTCTCCAAATCTTTCCGCCTTATTTAGCTTGAGATCTTTGCAGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp TGTATCGCTGATTCCTACTCTTTTGCTAGATCACACCAAAATTACTTCCTAAGTTCTAGGTACTTCTGCTaGAGCAGCAAAAACTTCATC +
Preference number: 4 (lower is better)
Translates to: CIADSYSFARSHQNYFLSSRYFC*SSKNFI
Trigger: GATGAAGTTTTTGCTGCTGCAGCAGAAGTACCTAGA...ACTTAGGAAGTAATTTTGGTGTGATCTAGCAAAAGAGTAGGAATCAGCGATACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp AACAAGATAGTTGTCATCTGGACTCCATGCAATATAAGAAACGCCATAAGCATGTATTCTAGGTACTTCTaGTGCAGCAGCAAAAACTTC +
Preference number: 4 (lower is better)
Translates to: NKIVVIWTPCNIRNAISMYSRYF*CSSKNF
Trigger: GAAGTTTTTGCTGCTGCAGCAGAAGTACCTAGAATA...CATGCTTATGGCGTTTCTTATATTGCATGGAGTCCAGATGACAACTATCTTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486652.5
CDS-3UTR GCA 90 bp AAATATACCAGTATTAACCAAACCTTAAACTCAGAGGGCACTTCACATGTGCACTATTCTAGGTACTTCTaGTGCAGCAGCAAAAACTTC +
Preference number: 4 (lower is better)
Translates to: KYTSINQTLNSEGTSHVHYSRYF*CSSKNF
Trigger: GAAGTTTTTGCTGCTGCAGCAGAAGTACCTAGAATA...GTGCACATGTGAAGTGCCCTCTGAGTTTAAGGTTTGGTTAATACTGGTATATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp GAGACTTTCAGTAAAAATGACAAGATCCTAGAACAGCTGTTTCCAGGACTTTTTGTGGTCTATAAAAGGTaGTGGTCCCCATATTCTAAC +
Preference number: 4 (lower is better)
Translates to: ETFSKNDKILEQLFPGLFVVYKR*WSPYSN
Trigger: GTTAGAATATGGGGACCAGCACCTTTTATAGACCAC...AAAAAGTCCTGGAAACAGCTGTTCTAGGATCTTGTCATTTTTACTGAAAGTCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000480676.2
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp TCCTATCCAATGTATACTCTTCAGACTAATGCACTCTTTCTATCAAGCCTTCTAGTGGTCTATAAAAGGTaGTGGTCCCCATATTCTAAC +
Preference number: 4 (lower is better)
Translates to: SYPMYTLQTNALFLSSLLVVYKR*WSPYSN
Trigger: GTTAGAATATGGGGACCAGCACCTTTTATAGACCAC...TAGAAGGCTTGATAGAAAGAGTGCATTAGTCTGAAGAGTATACATTGGATAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp AGCATGTCTGTCCAGCTATCAATCATGTTTGTTTGCACCAAATCCCAAGCCATTAACTATCCATGCTACTaGATTCCTCTTCAATATTCT +
Preference number: 4 (lower is better)
Translates to: SMSVQLSIMFVCTKSQAINYPCY*IPLQYS
Trigger: AGAATATTGAAGAGGAATGCAGTAGCATGGATAGTT...AATGGCTTGGGATTTGGTGCAAACAAACATGATTGATAGCTGGACAGACATGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp TTTCATGACGAGCATGTCTGTCCAGCTATCAATCATGTTTGTTTGCACCAAATCATCCATGAACCAAGCTaGAAAGATCTCAAGCTAAAT +
Preference number: 4 (lower is better)
Translates to: FHDEHVCPAINHVCLHQIIHEPS*KDLKLN
Trigger: ATTTAGCTTGAGATCTTTGCAGCTTGGTTCATGGAT...GATTTGGTGCAAACAAACATGATTGATAGCTGGACAGACATGCTCGTCATGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp CTCTCTCTCACACACACACAGAACACACACACACATTTTTATACTATTGGTTTTCTAAGTGGTGGTCTCTaGAAAATGGAGCTTGAAGAA +
Preference number: 4 (lower is better)
Translates to: LSLTHTQNTHTHFYTIGFLSGGL*KMELEE
Trigger: TTCTTCAAGCTCCATTTTGCAGAGACCACCACTTAG...AAAACCAATAGTATAAAAATGTGTGTGTGTGTTCTGTGTGTGTGTGAGAGAGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp CCAATGTATACTCTTCAGACTAATGCACTCTTTCTATCAAGCCTTCTAAACTGTCTAAGTGGTGGTCTCTaGAAAATGGAGCTTGAAGAA +
Preference number: 4 (lower is better)
Translates to: PMYTLQTNALFLSSLLNCLSGGL*KMELEE
Trigger: TTCTTCAAGCTCCATTTTGCAGAGACCACCACTTAG...ACAGTTTAGAAGGCTTGATAGAAAGAGTGCATTAGTCTGAAGAGTATACATTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp AGCTGCAAAGATCTCAAGCTAAATAAGGCGGAAAGATTTGGAGAAACAAAAGAACTAAGTGGTGGTCTCTaGAAAATGGAGCTTGAAGAA +
Preference number: 4 (lower is better)
Translates to: SCKDLKLNKAERFGETKELSGGL*KMELEE
Trigger: TTCTTCAAGCTCCATTTTGCAGAGACCACCACTTAG...TTCTTTTGTTTCTCCAAATCTTTCCGCCTTATTTAGCTTGAGATCTTTGCAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp AGCACTGTTTCTGACCATGTCTCATGTGGTATTCCAGAAGAGCATCAGTTATACGAGGTAAAGAGAAGTTaGCACTTAATTACATACAGT +
Preference number: 4 (lower is better)
Translates to: STVSDHVSCGIPEEHQLYEVKRS*HLITYS
Trigger: ACTGTATGTAATTAAGTGGCAACTTCTCTTTACCTC...GTATAACTGATGCTCTTCTGGAATACCACATGAGACATGGTCAGAAACAGTGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp GTAAGCCTGAATGTAGCACAGTTCTTCACAACCGATGGGGGAATAATTCAACATGAGGTAAAGAGAAGTTaGCACTTAATTACATACAGT +
Preference number: 4 (lower is better)
Translates to: VSLNVAQFFTTDGGIIQHEVKRS*HLITYS
Trigger: ACTGTATGTAATTAAGTGGCAACTTCTCTTTACCTC...ATGTTGAATTATTCCCCCATCGGTTGTGAAGAACTGTGCTACATTCAGGCTTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp AAGGCTAGAATCCATGAACCAAGCTGCAAAGATCTCAAGCTAAATAAGGCGGAAGAGGTAAAGAGAAGTTaGCACTTAATTACATACAGT +
Preference number: 4 (lower is better)
Translates to: KARIHEPSCKDLKLNKAEEVKRS*HLITYS
Trigger: ACTGTATGTAATTAAGTGGCAACTTCTCTTTACCTC...TTCCGCCTTATTTAGCTTGAGATCTTTGCAGCTTGGTTCATGGATTCTAGCCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp AAAATATATATACTGAGTTCAATGGGTAAGCCTGAATGTAGCACAGTTCTTCACAGAGTAGAATCTGAGTaGCAAATTGCCCCTGAATGG +
Preference number: 4 (lower is better)
Translates to: KIYILSSMGKPECSTVLHRVESE*QIAPEW
Trigger: CCATTCAGGGGCAATTTGGCACTCAGATTCTACTCT...GTGAAGAACTGTGCTACATTCAGGCTTACCCATTGAACTCAGTATATATATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp AAGGCTAGAATCCATGAACCAAGCTGCAAAGATCTCAAGCTAAATAAGGCGGAATGCTATAGAAACCTTTaGATAGTTGTTACTCCGTTT +
Preference number: 4 (lower is better)
Translates to: KARIHEPSCKDLKLNKAECYRNL*IVVTPF
Trigger: AAACGGAGTAACAACTATGCAAAGGTTTCTATAGCA...TTCCGCCTTATTTAGCTTGAGATCTTTGCAGCTTGGTTCATGGATTCTAGCCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp TGTATCGCTGATTCCTACTCTTTTGCTAGATCACACCAAAATTACTTCCTAAGTGGGTCAGTTCTTGTTTaGAGGAACCAACATCCTAAA +
Preference number: 4 (lower is better)
Translates to: CIADSYSFARSHQNYFLSGSVLV*RNQHPK
Trigger: TTTAGGATGTTGGTTCCTGCAAACAAGAACTGACCC...ACTTAGGAAGTAATTTTGGTGTGATCTAGCAAAAGAGTAGGAATCAGCGATACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp TTAAGACAGACCCGGAAAACAAACTCACCTAGCTGCTATAGAAACCTTTGCATACTAGTTCCACCACAATaGCATGTAAATCTTGACAAT +
Preference number: 4 (lower is better)
Translates to: LRQTRKTNSPSCYRNLCILVPPQ*HVNLDN
Trigger: ATTGTCAAGATTTACATGGCATTGTGGTGGAACTAG...TATGCAAAGGTTTCTATAGCAGCTAGGTGAGTTTGTTTTCCGGGTCTGTCTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp TATATTAAATCAGATATGGTTTCTGAAATGGAAGTAATGTGTTGGAGGGCAACCGGGTCAGTTCTTGTTTaGAGGAACCAACATCCATCA +
Preference number: 4 (lower is better)
Translates to: YIKSDMVSEMEVMCWRATGSVLV*RNQHPS
Trigger: TGATGGATGTTGGTTCCTGCAAACAAGAACTGACCC...GGTTGCCCTCCAACACATTACTTCCATTTCAGAAACCATATCTGATTTAATATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480676.2
CDS-3UTR CCA 90 bp TACACAGAAGAGCAACAAGAATGGTATCCTGCCAGACAAAAGACAGGAAGGAAAAAGATAGTTGTCATCTaGACTCCATGCAATATAAGA +
Preference number: 4 (lower is better)
Translates to: YTEEQQEWYPARQKTGRKKIVVI*TPCNIR
Trigger: TCTTATATTGCATGGAGTCCAGATGACAACTATCTT...TTTCCTTCCTGTCTTTTGTCTGGCAGGATACCATTCTTGTTGCTCTTCTGTGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp CCAAGCTGCAAAGATCTCAAGCTAAATAAGGCGGAAAGATTTGGAGAAACAAAAGTCTATAAAAGGTGCTaGTCCCCATATTCTAACAGT +
Preference number: 4 (lower is better)
Translates to: PSCKDLKLNKAERFGETKVYKRC*SPYSNS
Trigger: ACTGTTAGAATATGGGGACCAGCACCTTTTATAGAC...TTTTGTTTCTCCAAATCTTTCCGCCTTATTTAGCTTGAGATCTTTGCAGCTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp GTTTCTGACCATGTCTCATGTGGTATTCCAGAAGAGCATCAGTTATACTGTGTATCTTCAATATTCTGGTaGTCTATAAAAGGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: VSDHVSCGIPEEHQLYCVSSIFW*SIKGAG
Trigger: ACCAGCACCTTTTATAGACCACCAGAATATTGAAGA...TACACAGTATAACTGATGCTCTTCTGGAATACCACATGAGACATGGTCAGAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp TCCTATCCAATGTATACTCTTCAGACTAATGCACTCTTTCTATCAAGCCTTCTAGTTCTTCACAACCGATaGGGGAATAATTCAACATGG +
Preference number: 4 (lower is better)
Translates to: SYPMYTLQTNALFLSSLLVLHNR*GNNSTW
Trigger: CCATGTTGAATTATTCCCCCATCGGTTGTGAAGAAC...TAGAAGGCTTGATAGAAAGAGTGCATTAGTCTGAAGAGTATACATTGGATAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp AGCTGCAAAGATCTCAAGCTAAATAAGGCGGAAAGATTTGGAGAAACAAAAGAAGTTCTTCACAACCGATaGGGGAATAATTCAACATGG +
Preference number: 4 (lower is better)
Translates to: SCKDLKLNKAERFGETKEVLHNR*GNNSTW
Trigger: CCATGTTGAATTATTCCCCCATCGGTTGTGAAGAAC...TTCTTTTGTTTCTCCAAATCTTTCCGCCTTATTTAGCTTGAGATCTTTGCAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp CAGCTATCAATCATGTTTGTTTGCACCAAATCCCAAGCCATTAAAATACGACTAGTTCTTCACAACCGATaGGGGAATAATTCAACATGG +
Preference number: 4 (lower is better)
Translates to: QLSIMFVCTKSQAIKIRLVLHNR*GNNSTW
Trigger: CCATGTTGAATTATTCCCCCATCGGTTGTGAAGAAC...TAGTCGTATTTTAATGGCTTGGGATTTGGTGCAAACAAACATGATTGATAGCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp CTCTCTCTCACACACACACAGAACACACACACACATTTTTATACTATTGGTTTTGAAGAGCAACAAGAATaGTATCCTGCCAGACAAAAG +
Preference number: 4 (lower is better)
Translates to: LSLTHTQNTHTHFYTIGFEEQQE*YPARQK
Trigger: CTTTTGTCTGGCAGGATACCATTCTTGTTGCTCTTC...AAAACCAATAGTATAAAAATGTGTGTGTGTGTTCTGTGTGTGTGTGAGAGAGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp TTCCAAAGTGGTTGTATCGCTGATTCCTACTCTTTTGCTAGATCACACCAAAATCACTGGTTTATCATCTaGATCAGTATATACTGCGCA +
Preference number: 4 (lower is better)
Translates to: FQSGCIADSYSFARSHQNHWFII*ISIYCA
Trigger: TGCGCAGTATATACTGATCCAGATGATAAACCAGTG...ATTTTGGTGTGATCTAGCAAAAGAGTAGGAATCAGCGATACAACCACTTTGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp GTAAGCCTGAATGTAGCACAGTTCTTCACAACCGATGGGGGAATAATTCAACATTTTGACATAGTTCACTaGTTTATCATCTGGATCAGT +
Preference number: 4 (lower is better)
Translates to: VSLNVAQFFTTDGGIIQHFDIVH*FIIWIS
Trigger: ACTGATCCAGATGATAAACCAGTGAACTATGTCAAA...ATGTTGAATTATTCCCCCATCGGTTGTGAAGAACTGTGCTACATTCAGGCTTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp TCCTATCCAATGTATACTCTTCAGACTAATGCACTCTTTCTATCAAGCCTTCTATCTCATTCCAACAGCTaGAGTCACCCTATTTATCCT +
Preference number: 4 (lower is better)
Translates to: SYPMYTLQTNALFLSSLLSHSNS*SHPIYP
Trigger: AGGATAAATAGGGTGACTCCAGCTGTTGGAATGAGA...TAGAAGGCTTGATAGAAAGAGTGCATTAGTCTGAAGAGTATACATTGGATAGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp CTCTCTCTCACACACACACAGAACACACACACACATTTTTATACTATTGGTTTTTCTCATTCCAACAGCTaGAGTCACCCTATTTATCCT +
Preference number: 4 (lower is better)
Translates to: LSLTHTQNTHTHFYTIGFSHSNS*SHPIYP
Trigger: AGGATAAATAGGGTGACTCCAGCTGTTGGAATGAGA...AAAACCAATAGTATAAAAATGTGTGTGTGTGTTCTGTGTGTGTGTGAGAGAGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp AGCTGCAAAGATCTCAAGCTAAATAAGGCGGAAAGATTTGGAGAAACAAAAGAAGCCCTCTTCTCTTTGTaGATTCTGGAGTCTATTCAT +
Preference number: 4 (lower is better)
Translates to: SCKDLKLNKAERFGETKEALFSL*ILESIH
Trigger: ATGAATAGACTCCAGAATCCACAAAGAGAAGAGGGC...TTCTTTTGTTTCTCCAAATCTTTCCGCCTTATTTAGCTTGAGATCTTTGCAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp CTCTCTCTCACACACACACAGAACACACACACACATTTTTATACTATTGGTTTTTGTTACCATAGAGACTaGGGTGTATTAACGGCTTCA +
Preference number: 4 (lower is better)
Translates to: LSLTHTQNTHTHFYTIGFCYHRD*GVLTAS
Trigger: TGAAGCCGTTAATACACCCCAGTCTCTATGGTAACA...AAAACCAATAGTATAAAAATGTGTGTGTGTGTTCTGTGTGTGTGTGAGAGAGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp ACTAACCTGATTTTTGGAGCCCAAATTCTCCACTCTATTTTGATCTATGTGCAAAGCACAGTCACTGCATaGCAAATGTATGAAACAGAC +
Preference number: 4 (lower is better)
Translates to: TNLIFGAQILHSILIYVQSTVTA*QMYETD
Trigger: GTCTGTTTCATACATTTGCCATGCAGTGACTGTGCT...TTGCACATAGATCAAAATAGAGTGGAGAATTTGGGCTCCAAAAATCAGGTTAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp AAGGCTAGAATCCATGAACCAAGCTGCAAAGATCTCAAGCTAAATAAGGCGGAATTGATCTCTACAGCTTaGTTTGTAAGTACATACATG +
Preference number: 4 (lower is better)
Translates to: KARIHEPSCKDLKLNKAELISTA*FVSTYM
Trigger: CATGTATGTACTTACAAACCAAGCTGTAGAGATCAA...TTCCGCCTTATTTAGCTTGAGATCTTTGCAGCTTGGTTCATGGATTCTAGCCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp ATGACGAGCATGTCTGTCCAGCTATCAATCATGTTTGTTTGCACCAAATCCCAATTGATCTCTACAGCTTaGTTTGTAAGTACATACATG +
Preference number: 4 (lower is better)
Translates to: MTSMSVQLSIMFVCTKSQLISTA*FVSTYM
Trigger: CATGTATGTACTTACAAACCAAGCTGTAGAGATCAA...TTGGGATTTGGTGCAAACAAACATGATTGATAGCTGGACAGACATGCTCGTCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp AAAATATATATACTGAGTTCAATGGGTAAGCCTGAATGTAGCACAGTTCTTCACCTGCTGCGTATAACATaGGAACTGCCTCCTTTAAGT +
Preference number: 4 (lower is better)
Translates to: KIYILSSMGKPECSTVLHLLRIT*ELPPLS
Trigger: ACTTAAAGGAGGCAGTTCCCATGTTATACGCAGCAG...GTGAAGAACTGTGCTACATTCAGGCTTACCCATTGAACTCAGTATATATATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486652.5
3UTR CAA 72 bp CACTTGTCAAACTGTCTTCATGAGACTGGCTCATTTTaGTCCTTAGTTCTCCTGTCATTTAATCTAGTCTTG +
Preference number: 4 (lower is better)
Translates to: HLSNCLHETGSF*SLVLLSFNLVL
Trigger: CAAGACTAGATTAAATGACAGGAGAACTAAGGACAAAAATGAGCCAGTCTCATGAAGACAGTTTGACAAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486652.5
CDS-3UTR TCA 90 bp GAGACTTTCAGTAAAAATGACAAGATCCTAGAACAGCTGTTTCCAGGACTTTTTTACCCACTAAGAACATaGATGCGCTCTGTATTGTAT +
Preference number: 4 (lower is better)
Translates to: ETFSKNDKILEQLFPGLFYPLRT*MRSVLY
Trigger: ATACAATACAGAGCGCATTCATGTTCTTAGTGGGTA...AAAAAGTCCTGGAAACAGCTGTTCTAGGATCTTGTCATTTTTACTGAAAGTCTC
38% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp AGCTGCAAAGATCTCAAGCTAAATAAGGCGGAAAGATTTGGAGAAACAAAAGAATACCCACTAAGAACATaGATGCGCTCTGTATTGTAT +
Preference number: 4 (lower is better)
Translates to: SCKDLKLNKAERFGETKEYPLRT*MRSVLY
Trigger: ATACAATACAGAGCGCATTCATGTTCTTAGTGGGTA...TTCTTTTGTTTCTCCAAATCTTTCCGCCTTATTTAGCTTGAGATCTTTGCAGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp CCAATGTATACTCTTCAGACTAATGCACTCTTTCTATCAAGCCTTCTAAACTGTTACCCACTAAGAACATaGATGCGCTCTGTATTGTAT +
Preference number: 4 (lower is better)
Translates to: PMYTLQTNALFLSSLLNCYPLRT*MRSVLY
Trigger: ATACAATACAGAGCGCATTCATGTTCTTAGTGGGTA...ACAGTTTAGAAGGCTTGATAGAAAGAGTGCATTAGTCTGAAGAGTATACATTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp GAGACTTTCAGTAAAAATGACAAGATCCTAGAACAGCTGTTTCCAGGACTTTTTAGCACCAGTTTAGAATaGGGTTCAGTATGGCAATAT +
Preference number: 4 (lower is better)
Translates to: ETFSKNDKILEQLFPGLFSTSLE*GSVWQY
Trigger: ATATTGCCATACTGAACCTCATTCTAAACTGGTGCT...AAAAAGTCCTGGAAACAGCTGTTCTAGGATCTTGTCATTTTTACTGAAAGTCTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp CTCTCTCTCACACACACACAGAACACACACACACATTTTTATACTATTGGTTTTAGCACCAGTTTAGAATaGGGTTCAGTATGGCAATAT +
Preference number: 4 (lower is better)
Translates to: LSLTHTQNTHTHFYTIGFSTSLE*GSVWQY
Trigger: ATATTGCCATACTGAACCTCATTCTAAACTGGTGCT...AAAACCAATAGTATAAAAATGTGTGTGTGTGTTCTGTGTGTGTGTGAGAGAGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp CCAAGCTGCAAAGATCTCAAGCTAAATAAGGCGGAAAGATTTGGAGAAACAAAACTATTTATCCTCTACTaGAAAAGGGAGGGAATTTCA +
Preference number: 4 (lower is better)
Translates to: PSCKDLKLNKAERFGETKLFILY*KREGIS
Trigger: TGAAATTCCCTCCCTTTTTCAGTAGAGGATAAATAG...TTTTGTTTCTCCAAATCTTTCCGCCTTATTTAGCTTGAGATCTTTGCAGCTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp AAAATATATATACTGAGTTCAATGGGTAAGCCTGAATGTAGCACAGTTCTTCACCAATGGAAGAATTTTTaGCATCCAAGCCCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: KIYILSSMGKPECSTVLHQWKNF*HPSPLL
Trigger: GAGAAGAGGGCTTGGATGTCAAAAATTCTTCCATTG...GTGAAGAACTGTGCTACATTCAGGCTTACCCATTGAACTCAGTATATATATTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp AAAATATATATACTGAGTTCAATGGGTAAGCCTGAATGTAGCACAGTTCTTCACAAAAACTTCATCCTCTaGCATGACAGAAAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: KIYILSSMGKPECSTVLHKNFIL*HDRKQQ
Trigger: CTGCTGCTTTCTGTCATGTCAGAGGATGAAGTTTTT...GTGAAGAACTGTGCTACATTCAGGCTTACCCATTGAACTCAGTATATATATTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486652.5
CDS-3UTR GCA 90 bp AAAATATATATACTGAGTTCAATGGGTAAGCCTGAATGTAGCACAGTTCTTCACTCTAGGTACTTCTGCTaGAGCAGCAAAAACTTCATC +
Preference number: 4 (lower is better)
Translates to: KIYILSSMGKPECSTVLHSRYFC*SSKNFI
Trigger: GATGAAGTTTTTGCTGCTGCAGCAGAAGTACCTAGA...GTGAAGAACTGTGCTACATTCAGGCTTACCCATTGAACTCAGTATATATATTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp GAGACTTTCAGTAAAAATGACAAGATCCTAGAACAGCTGTTTCCAGGACTTTTTGTCATCTGGACTCCATaGAATATAAGAAACGCCATA +
Preference number: 4 (lower is better)
Translates to: ETFSKNDKILEQLFPGLFVIWTP*NIRNAI
Trigger: TATGGCGTTTCTTATATTGCATGGAGTCCAGATGAC...AAAAAGTCCTGGAAACAGCTGTTCTAGGATCTTGTCATTTTTACTGAAAGTCTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000480676.2
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp TGTATCGCTGATTCCTACTCTTTTGCTAGATCACACCAAAATTACTTCCTAAGTGTCATCTGGACTCCATaGAATATAAGAAACGCCATA +
Preference number: 4 (lower is better)
Translates to: CIADSYSFARSHQNYFLSVIWTP*NIRNAI
Trigger: TATGGCGTTTCTTATATTGCATGGAGTCCAGATGAC...ACTTAGGAAGTAATTTTGGTGTGATCTAGCAAAAGAGTAGGAATCAGCGATACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp CCAATGTATACTCTTCAGACTAATGCACTCTTTCTATCAAGCCTTCTAAACTGTGTCATCTGGACTCCATaGAATATAAGAAACGCCATA +
Preference number: 4 (lower is better)
Translates to: PMYTLQTNALFLSSLLNCVIWTP*NIRNAI
Trigger: TATGGCGTTTCTTATATTGCATGGAGTCCAGATGAC...ACAGTTTAGAAGGCTTGATAGAAAGAGTGCATTAGTCTGAAGAGTATACATTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp GAACCAAGCTGCAAAGATCTCAAGCTAAATAAGGCGGAAAGATTTGGAGAAACAAACTATCCATGCTACTaGATTCCTCTTCAATATTCT +
Preference number: 4 (lower is better)
Translates to: EPSCKDLKLNKAERFGETNYPCY*IPLQYS
Trigger: AGAATATTGAAGAGGAATGCAGTAGCATGGATAGTT...TGTTTCTCCAAATCTTTCCGCCTTATTTAGCTTGAGATCTTTGCAGCTTGGTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp GTTTCTGACCATGTCTCATGTGGTATTCCAGAAGAGCATCAGTTATACTGTGTAAACTATCCATGCTACTaGATTCCTCTTCAATATTCT +
Preference number: 4 (lower is better)
Translates to: VSDHVSCGIPEEHQLYCVNYPCY*IPLQYS
Trigger: AGAATATTGAAGAGGAATGCAGTAGCATGGATAGTT...TACACAGTATAACTGATGCTCTTCTGGAATACCACATGAGACATGGTCAGAAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp TCCTATCCAATGTATACTCTTCAGACTAATGCACTCTTTCTATCAAGCCTTCTAACCATCAACTATCCATaGTACTGCATTCCTCTTCAA +
Preference number: 4 (lower is better)
Translates to: SYPMYTLQTNALFLSSLLTINYP*YCIPLQ
Trigger: TTGAAGAGGAATGCAGTAGCATGGATAGTTGATGGT...TAGAAGGCTTGATAGAAAGAGTGCATTAGTCTGAAGAGTATACATTGGATAGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp GAGACTTTCAGTAAAAATGACAAGATCCTAGAACAGCTGTTTCCAGGACTTTTTACCATCAACTATCCATaGTACTGCATTCCTCTTCAA +
Preference number: 4 (lower is better)
Translates to: ETFSKNDKILEQLFPGLFTINYP*YCIPLQ
Trigger: TTGAAGAGGAATGCAGTAGCATGGATAGTTGATGGT...AAAAAGTCCTGGAAACAGCTGTTCTAGGATCTTGTCATTTTTACTGAAAGTCTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp TTCCAAAGTGGTTGTATCGCTGATTCCTACTCTTTTGCTAGATCACACCAAAATTCAATCATGTTTGTTTaGACCAAATCCCAAGCCATT +
Preference number: 4 (lower is better)
Translates to: FQSGCIADSYSFARSHQNSIMFV*TKSQAI
Trigger: AATGGCTTGGGATTTGGTGCAAACAAACATGATTGA...ATTTTGGTGTGATCTAGCAAAAGAGTAGGAATCAGCGATACAACCACTTTGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp AAAATATATATACTGAGTTCAATGGGTAAGCCTGAATGTAGCACAGTTCTTCACACAAGAATGGTATCCTaGCAGACAAAAGACAGGAAG +
Preference number: 4 (lower is better)
Translates to: KIYILSSMGKPECSTVLHTRMVS*QTKDRK
Trigger: CTTCCTGTCTTTTGTCTGGCAGGATACCATTCTTGT...GTGAAGAACTGTGCTACATTCAGGCTTACCCATTGAACTCAGTATATATATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp AATGGAAGTAATGTGTTGGAGGGCAACCCAAAAGGACAGTTGCGAAATTATGAATGTTCTTGTAAAATGTaGCTCACTTTTACTCCACTT +
Preference number: 4 (lower is better)
Translates to: NGSNVLEGNPKGQLRNYECSCKM*LTFTPL
Trigger: AAGTGGAGTAAAAGTGAGGCACATTTTACAAGAACA...TTCATAATTTCGCAACTGTCCTTTTGGGTTGCCCTCCAACACATTACTTCCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp CCAATGTATACTCTTCAGACTAATGCACTCTTTCTATCAAGCCTTCTAAACTGTTGGATCAGAAAATCCTaGGATCAGTTTCTCATACCA +
Preference number: 4 (lower is better)
Translates to: PMYTLQTNALFLSSLLNCWIRKS*DQFLIP
Trigger: TGGTATGAGAAACTGATCGCAGGATTTTCTGATCCA...ACAGTTTAGAAGGCTTGATAGAAAGAGTGCATTAGTCTGAAGAGTATACATTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp ATTCACCATCAACTATCCATGCTACTGCATTCCTCTTCAATATTCTGGTGGTCTCTGAGAGATAATAGCTaGCCTTGGTGTAATAATAAA +
Preference number: 4 (lower is better)
Translates to: IHHQLSMLLHSSSIFWWSLRDNS*PWCNNK
Trigger: TTTATTATTACACCAAGGGCAGCTATTATCTCTCAG...AGACCACCAGAATATTGAAGAGGAATGCAGTAGCATGGATAGTTGATGGTGAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486652.5
CDS-3UTR CCA 90 bp CCAAGCTGCAAAGATCTCAAGCTAAATAAGGCGGAAAGATTTGGAGAAACAAAATCCTCTTCAATATTCTaGTGGTCTATAAAAGGTGCT +
Preference number: 4 (lower is better)
Translates to: PSCKDLKLNKAERFGETKSSSIF*WSIKGA
Trigger: AGCACCTTTTATAGACCACCAGAATATTGAAGAGGA...TTTTGTTTCTCCAAATCTTTCCGCCTTATTTAGCTTGAGATCTTTGCAGCTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp TTGTTAGTATCTTGTGGCTGGCTTCATAGTATAAGACTCACTCTTAAGCCTACTTCCTCTTCAATATTCTaGTGGTCTATAAAAGGTGCT +
Preference number: 4 (lower is better)
Translates to: LLVSCGWLHSIRLTLKPTSSSIF*WSIKGA
Trigger: AGCACCTTTTATAGACCACCAGAATATTGAAGAGGA...AGTAGGCTTAAGAGTGAGTCTTATACTATGAAGCCAGCCACAAGATACTAACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp AGCTGCAAAGATCTCAAGCTAAATAAGGCGGAAAGATTTGGAGAAACAAAAGAACACTGGTTTATCATCTaGATCAGTATATACTGCGCA +
Preference number: 4 (lower is better)
Translates to: SCKDLKLNKAERFGETKEHWFII*ISIYCA
Trigger: TGCGCAGTATATACTGATCCAGATGATAAACCAGTG...TTCTTTTGTTTCTCCAAATCTTTCCGCCTTATTTAGCTTGAGATCTTTGCAGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp TCCTATCCAATGTATACTCTTCAGACTAATGCACTCTTTCTATCAAGCCTTCTACACTGGTTTATCATCTaGATCAGTATATACTGCGCA +
Preference number: 4 (lower is better)
Translates to: SYPMYTLQTNALFLSSLLHWFII*ISIYCA
Trigger: TGCGCAGTATATACTGATCCAGATGATAAACCAGTG...TAGAAGGCTTGATAGAAAGAGTGCATTAGTCTGAAGAGTATACATTGGATAGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp ACTAACCTGATTTTTGGAGCCCAAATTCTCCACTCTATTTTGATCTATGTGCAACACTGGTTTATCATCTaGATCAGTATATACTGCGCA +
Preference number: 4 (lower is better)
Translates to: TNLIFGAQILHSILIYVQHWFII*ISIYCA
Trigger: TGCGCAGTATATACTGATCCAGATGATAAACCAGTG...TTGCACATAGATCAAAATAGAGTGGAGAATTTGGGCTCCAAAAATCAGGTTAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp GTGGTTGTATCGCTGATTCCTACTCTTTTGCTAGATCACACCAAAATTACTTCCTTTGACATAGTTCACTaGTTTATCATCTGGATCAGT +
Preference number: 4 (lower is better)
Translates to: VVVSLIPTLLLDHTKITSFDIVH*FIIWIS
Trigger: ACTGATCCAGATGATAAACCAGTGAACTATGTCAAA...GGAAGTAATTTTGGTGTGATCTAGCAAAAGAGTAGGAATCAGCGATACAACCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp GACTTGGCTACACCTAAAGGGGAACTTAGTACAAGACTTTTTCTTCACCAGAATTTTGACATAGTTCACTaGTTTATCATCTGGATCAGT +
Preference number: 4 (lower is better)
Translates to: DLATPKGELSTRLFLHQNFDIVH*FIIWIS
Trigger: ACTGATCCAGATGATAAACCAGTGAACTATGTCAAA...ATTCTGGTGAAGAAAAAGTCTTGTACTAAGTTCCCCTTTAGGTGTAGCCAAGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp TATATTAAATCAGATATGGTTTCTGAAATGGAAGTAATGTGTTGGAGGGCAACCGCCCTCTTCTCTTTGTaGATTCTGGAGTCTATTCAT +
Preference number: 4 (lower is better)
Translates to: YIKSDMVSEMEVMCWRATALFSL*ILESIH
Trigger: ATGAATAGACTCCAGAATCCACAAAGAGAAGAGGGC...GGTTGCCCTCCAACACATTACTTCCATTTCAGAAACCATATCTGATTTAATATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp TTCCAAAGTGGTTGTATCGCTGATTCCTACTCTTTTGCTAGATCACACCAAAATTTTACTATGGGCTTCTaGGAGAATGCATGCTATTTT +
Preference number: 4 (lower is better)
Translates to: FQSGCIADSYSFARSHQNFTMGF*ENACYF
Trigger: AAAATAGCATGCATTCTCCCAGAAGCCCATAGTAAA...ATTTTGGTGTGATCTAGCAAAAGAGTAGGAATCAGCGATACAACCACTTTGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp TGTATCGCTGATTCCTACTCTTTTGCTAGATCACACCAAAATTACTTCCTAAGTAATTACTTCCTAAGTTaGGAACAACTTGGAACAAGC +
Preference number: 4 (lower is better)
Translates to: CIADSYSFARSHQNYFLSNYFLS*EQLGTS
Trigger: GCTTGTTCCAAGTTGTTCTCAACTTAGGAAGTAATT...ACTTAGGAAGTAATTTTGGTGTGATCTAGCAAAAGAGTAGGAATCAGCGATACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp CCAATGTATACTCTTCAGACTAATGCACTCTTTCTATCAAGCCTTCTAAACTGTAATTACTTCCTAAGTTaGGAACAACTTGGAACAAGC +
Preference number: 4 (lower is better)
Translates to: PMYTLQTNALFLSSLLNCNYFLS*EQLGTS
Trigger: GCTTGTTCCAAGTTGTTCTCAACTTAGGAAGTAATT...ACAGTTTAGAAGGCTTGATAGAAAGAGTGCATTAGTCTGAAGAGTATACATTGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp CCAATGTATACTCTTCAGACTAATGCACTCTTTCTATCAAGCCTTCTAAACTGTCTTAAGTTCTTTTCTTaGTCTCTACAGCTTGGTTTG +
Preference number: 4 (lower is better)
Translates to: PMYTLQTNALFLSSLLNCLKFFS*SLQLGL
Trigger: CAAACCAAGCTGTAGAGATCAAGAAAAGAACTTAAG...ACAGTTTAGAAGGCTTGATAGAAAGAGTGCATTAGTCTGAAGAGTATACATTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp TCCTATCCAATGTATACTCTTCAGACTAATGCACTCTTTCTATCAAGCCTTCTAGTATCCGGATCAACTTaGCATATGATAACTGTTGTA +
Preference number: 4 (lower is better)
Translates to: SYPMYTLQTNALFLSSLLVSGST*HMITVV
Trigger: TACAACAGTTATCATATGGCAAGTTGATCCGGATAC...TAGAAGGCTTGATAGAAAGAGTGCATTAGTCTGAAGAGTATACATTGGATAGGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp TATATTAAATCAGATATGGTTTCTGAAATGGAAGTAATGTGTTGGAGGGCAACCACCATCAACTATCCATaGTACTGCATTCCTCTTCAA +
Preference number: 4 (lower is better)
Translates to: YIKSDMVSEMEVMCWRATTINYP*YCIPLQ
Trigger: TTGAAGAGGAATGCAGTAGCATGGATAGTTGATGGT...GGTTGCCCTCCAACACATTACTTCCATTTCAGAAACCATATCTGATTTAATATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp CCAAGCTGCAAAGATCTCAAGCTAAATAAGGCGGAAAGATTTGGAGAAACAAAAGAGGTAAAGAGAAGTTaGCACTTAATTACATACAGT +
Preference number: 4 (lower is better)
Translates to: PSCKDLKLNKAERFGETKEVKRS*HLITYS
Trigger: ACTGTATGTAATTAAGTGGCAACTTCTCTTTACCTC...TTTTGTTTCTCCAAATCTTTCCGCCTTATTTAGCTTGAGATCTTTGCAGCTTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp CAGCTATCAATCATGTTTGTTTGCACCAAATCCCAAGCCATTAAAATACGACTACTAGTTCCACCACAATaGCATGTAAATCTTGACAAT +
Preference number: 4 (lower is better)
Translates to: QLSIMFVCTKSQAIKIRLLVPPQ*HVNLDN
Trigger: ATTGTCAAGATTTACATGGCATTGTGGTGGAACTAG...TAGTCGTATTTTAATGGCTTGGGATTTGGTGCAAACAAACATGATTGATAGCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp CAGCTATCAATCATGTTTGTTTGCACCAAATCCCAAGCCATTAAAATACGACTATCTTCAATATTCTGGTaGTCTATAAAAGGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: QLSIMFVCTKSQAIKIRLSSIFW*SIKGAG
Trigger: ACCAGCACCTTTTATAGACCACCAGAATATTGAAGA...TAGTCGTATTTTAATGGCTTGGGATTTGGTGCAAACAAACATGATTGATAGCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp TTTTTCATGACGAGCATGTCTGTCCAGCTATCAATCATGTTTGTTTGCACCAAATTTGACATAGTTCACTaGTTTATCATCTGGATCAGT +
Preference number: 4 (lower is better)
Translates to: FFMTSMSVQLSIMFVCTKFDIVH*FIIWIS
Trigger: ACTGATCCAGATGATAAACCAGTGAACTATGTCAAA...TTTGGTGCAAACAAACATGATTGATAGCTGGACAGACATGCTCGTCATGAAAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp TGTATCGCTGATTCCTACTCTTTTGCTAGATCACACCAAAATTACTTCCTAAGTTTTACTATGGGCTTCTaGGAGAATGCATGCTATTTT +
Preference number: 4 (lower is better)
Translates to: CIADSYSFARSHQNYFLSFTMGF*ENACYF
Trigger: AAAATAGCATGCATTCTCCCAGAAGCCCATAGTAAA...ACTTAGGAAGTAATTTTGGTGTGATCTAGCAAAAGAGTAGGAATCAGCGATACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp ACTAACCTGATTTTTGGAGCCCAAATTCTCCACTCTATTTTGATCTATGTGCAATTTACTATGGGCTTCTaGGAGAATGCATGCTATTTT +
Preference number: 4 (lower is better)
Translates to: TNLIFGAQILHSILIYVQFTMGF*ENACYF
Trigger: AAAATAGCATGCATTCTCCCAGAAGCCCATAGTAAA...TTGCACATAGATCAAAATAGAGTGGAGAATTTGGGCTCCAAAAATCAGGTTAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp TGTATCGCTGATTCCTACTCTTTTGCTAGATCACACCAAAATTACTTCCTAAGTGTGGTCTCTGCAAAATaGAGCTTGAAGAAATCTTTT +
Preference number: 4 (lower is better)
Translates to: CIADSYSFARSHQNYFLSVVSAK*SLKKSF
Trigger: AAAAGATTTCTTCAAGCTCCATTTTGCAGAGACCAC...ACTTAGGAAGTAATTTTGGTGTGATCTAGCAAAAGAGTAGGAATCAGCGATACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp CCAATGTATACTCTTCAGACTAATGCACTCTTTCTATCAAGCCTTCTAAACTGTGTGGTCTCTGCAAAATaGAGCTTGAAGAAATCTTTT +
Preference number: 4 (lower is better)
Translates to: PMYTLQTNALFLSSLLNCVVSAK*SLKKSF
Trigger: AAAAGATTTCTTCAAGCTCCATTTTGCAGAGACCAC...ACAGTTTAGAAGGCTTGATAGAAAGAGTGCATTAGTCTGAAGAGTATACATTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp CCAATGTATACTCTTCAGACTAATGCACTCTTTCTATCAAGCCTTCTAAACTGTATTTGTAAACAGCTGTaGAGTTTCTATGCCCACATT +
Preference number: 4 (lower is better)
Translates to: PMYTLQTNALFLSSLLNCICKQL*SFYAHI
Trigger: AATGTGGGCATAGAAACTCCACAGCTGTTTACAAAT...ACAGTTTAGAAGGCTTGATAGAAAGAGTGCATTAGTCTGAAGAGTATACATTGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp TCCTATCCAATGTATACTCTTCAGACTAATGCACTCTTTCTATCAAGCCTTCTATTAGTATCTTGTGGCTaGCTTCATAGTATAAGACTC +
Preference number: 4 (lower is better)
Translates to: SYPMYTLQTNALFLSSLLLVSCG*LHSIRL
Trigger: GAGTCTTATACTATGAAGCCAGCCACAAGATACTAA...TAGAAGGCTTGATAGAAAGAGTGCATTAGTCTGAAGAGTATACATTGGATAGGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp TATATTAAATCAGATATGGTTTCTGAAATGGAAGTAATGTGTTGGAGGGCAACCTTACTGAAAACCAACTaGCTACTGATGTCTCATGTT +
Preference number: 4 (lower is better)
Translates to: YIKSDMVSEMEVMCWRATLLKTN*LLMSHV
Trigger: AACATGAGACATCAGTAGTCAGTTGGTTTTCAGTAA...GGTTGCCCTCCAACACATTACTTCCATTTCAGAAACCATATCTGATTTAATATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR TCA 90 bp AAAATATATATACTGAGTTCAATGGGTAAGCCTGAATGTAGCACAGTTCTTCACCTTAAGTTCTTTTCTTaGTCTCTACAGCTTGGTTTG +
Preference number: 4 (lower is better)
Translates to: KIYILSSMGKPECSTVLHLKFFS*SLQLGL
Trigger: CAAACCAAGCTGTAGAGATCAAGAAAAGAACTTAAG...GTGAAGAACTGTGCTACATTCAGGCTTACCCATTGAACTCAGTATATATATTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp TATATTAAATCAGATATGGTTTCTGAAATGGAAGTAATGTGTTGGAGGGCAACCATCCATGAACCAAGCTaGAAAGATCTCAAGCTAAAT +
Preference number: 4 (lower is better)
Translates to: YIKSDMVSEMEVMCWRATIHEPS*KDLKLN
Trigger: ATTTAGCTTGAGATCTTTGCAGCTTGGTTCATGGAT...GGTTGCCCTCCAACACATTACTTCCATTTCAGAAACCATATCTGATTTAATATA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp TGTATCGCTGATTCCTACTCTTTTGCTAGATCACACCAAAATTACTTCCTAAGTTGCTATAGAAACCTTTaGATAGTTGTTACTCCGTTT +
Preference number: 4 (lower is better)
Translates to: CIADSYSFARSHQNYFLSCYRNL*IVVTPF
Trigger: AAACGGAGTAACAACTATGCAAAGGTTTCTATAGCA...ACTTAGGAAGTAATTTTGGTGTGATCTAGCAAAAGAGTAGGAATCAGCGATACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp CTCTCTCTCACACACACACAGAACACACACACACATTTTTATACTATTGGTTTTAAGATAGTTGTCATCTaGACTCCATGCAATATAAGA +
Preference number: 4 (lower is better)
Translates to: LSLTHTQNTHTHFYTIGFKIVVI*TPCNIR
Trigger: TCTTATATTGCATGGAGTCCAGATGACAACTATCTT...AAAACCAATAGTATAAAAATGTGTGTGTGTGTTCTGTGTGTGTGTGAGAGAGAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000480676.2
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp ACTAACCTGATTTTTGGAGCCCAAATTCTCCACTCTATTTTGATCTATGTGCAAAAGATAGTTGTCATCTaGACTCCATGCAATATAAGA +
Preference number: 4 (lower is better)
Translates to: TNLIFGAQILHSILIYVQKIVVI*TPCNIR
Trigger: TCTTATATTGCATGGAGTCCAGATGACAACTATCTT...TTGCACATAGATCAAAATAGAGTGGAGAATTTGGGCTCCAAAAATCAGGTTAGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp ACTAACCTGATTTTTGGAGCCCAAATTCTCCACTCTATTTTGATCTATGTGCAATCTCTTTGTGGATTCTaGAGTCTATTCATGATCATA +
Preference number: 4 (lower is better)
Translates to: TNLIFGAQILHSILIYVQSLCGF*SLFMII
Trigger: TATGATCATGAATAGACTCCAGAATCCACAAAGAGA...TTGCACATAGATCAAAATAGAGTGGAGAATTTGGGCTCCAAAAATCAGGTTAGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CCA 90 bp TCCTATCCAATGTATACTCTTCAGACTAATGCACTCTTTCTATCAAGCCTTCTATCTCTTTGTGGATTCTaGAGTCTATTCATGATCATA +
Preference number: 4 (lower is better)
Translates to: SYPMYTLQTNALFLSSLLSLCGF*SLFMII
Trigger: TATGATCATGAATAGACTCCAGAATCCACAAAGAGA...TAGAAGGCTTGATAGAAAGAGTGCATTAGTCTGAAGAGTATACATTGGATAGGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp TATATTAAATCAGATATGGTTTCTGAAATGGAAGTAATGTGTTGGAGGGCAACCAACTATCCATGCTACTaGATTCCTCTTCAATATTCT +
Preference number: 4 (lower is better)
Translates to: YIKSDMVSEMEVMCWRATNYPCY*IPLQYS
Trigger: AGAATATTGAAGAGGAATGCAGTAGCATGGATAGTT...GGTTGCCCTCCAACACATTACTTCCATTTCAGAAACCATATCTGATTTAATATA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000480676.2
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR GCA 90 bp AAAATATATATACTGAGTTCAATGGGTAAGCCTGAATGTAGCACAGTTCTTCACAACTATCCATGCTACTaGATTCCTCTTCAATATTCT +
Preference number: 4 (lower is better)
Translates to: KIYILSSMGKPECSTVLHNYPCY*IPLQYS
Trigger: AGAATATTGAAGAGGAATGCAGTAGCATGGATAGTT...GTGAAGAACTGTGCTACATTCAGGCTTACCCATTGAACTCAGTATATATATTTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS GCA 90 bp AGGAGGAGGACGAGGACGACGAGGACGGAGGGGAGAGGCCTGCTCTaGCTGCCGAAGCCCCGGGCTCTCCTACTCCCTCCGCCGCCGAGG +
Preference number: 5 (lower is better)
Translates to: RRRTRTTRTEGRGLL*LPKPRALLLPPPPR
Trigger: CCTCGGCGGCGGAGGGAGTAGGAGAGCCCGGGGCTTCGGCAGGCAGAGCAGGCCTCTCCCCTCCGTCCTCGTCGTCCTCGTCCTCCTCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000678307.1
ENST00000678555.1
ENST00000678917.1
CDS GCA 90 bp GGAGGAGGAGGAGGACGAGGACGACGAGGACGGAGGGGAGAGGCCTaGTCTGCCTGCCGAAGCCCCGGGCTCTCCTACTCCCTCCGCCGC +
Preference number: 5 (lower is better)
Translates to: GGGGGRGRRGRRGEA*SACRSPGLSYSLRR
Trigger: GCGGCGGAGGGAGTAGGAGAGCCCGGGGCTTCGGCAGGCAGAGCAGGCCTCTCCCCTCCGTCCTCGTCGTCCTCGTCCTCCTCCTCCTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000678307.1
ENST00000678555.1
ENST00000678917.1
CDS GCA 90 bp CCCTCCTCCTCCACCGCCGCCGCCGCCACCTCCTCCTCCTCCTCCTaGCCCATTGGCCTGCATGATGCTGCCGCTGACCAGGCTGTGGCC +
Preference number: 5 (lower is better)
Translates to: PSSSTAAAATSSSSS*PIGLHDAAADQAVA
Trigger: GGCCACAGCCTGGTCAGCGGCAGCATCATGCAGGCCAATGGGGCAGGAGGAGGAGGAGGAGGTGGCGGCGGCGGCGGTGGAGGAGGAGGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000678307.1
ENST00000678555.1
ENST00000678917.1
CDS-3UTR CAA 90 bp GCCATCATGGATGGAATCTGTGGGTTCCAGCTCACACAGTTTACTGTACGTGTGGAAGGCAGGAGCCCATaGGCGTGGGCCAGGTCCCCC +
Preference number: 5 (lower is better)
Translates to: AIMDGICGFQLTQFTVRVEGRSP*AWARSP
Trigger: GGGGGACCTGGCCCACGCCAATGGGCTCCTGCCTTC...CACACGTACAGTAAACTGTGTGAGCTGGAACCCACAGATTCCATCCATGATGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486652.5
CDS-3UTR CAA 90 bp GTTACTATGAAGCAAGGTGTAAATGTTTGGCCCCAATCGGGCTTCAGAAATGGTGAAGGCAGGAGCCCATaGGCGTGGGCCAGGTCCCCC +
Preference number: 5 (lower is better)
Translates to: VTMKQGVNVWPQSGFRNGEGRSP*AWARSP
Trigger: GGGGGACCTGGCCCACGCCAATGGGCTCCTGCCTTC...ACCATTTCTGAAGCCCGATTGGGGCCAAACATTTACACCTTGCTTCATAGTAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678917.1
CDS-3UTR CAA 90 bp ATGACGAGCATGTCTGTCCAGCTATCAATCATGTTTGTTTGCACCAAATCCCAAGAAGGCAGGAGCCCATaGGCGTGGGCCAGGTCCCCC +
Preference number: 5 (lower is better)
Translates to: MTSMSVQLSIMFVCTKSQEGRSP*AWARSP
Trigger: GGGGGACCTGGCCCACGCCAATGGGCTCCTGCCTTC...TTGGGATTTGGTGCAAACAAACATGATTGATAGCTGGACAGACATGCTCGTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678917.1
CDS-3UTR CAA 90 bp ACAACCGATGGGGGAATAATTCAACATGGTGTCCAACAACGTTCTAACGACGTGAGGCTGTTGCTATTGTaGCTGGCGGCGGAGGGGGCG +
Preference number: 5 (lower is better)
Translates to: TTDGGIIQHGVQQRSNDVRLLLL*LAAEGA
Trigger: CGCCCCCTCCGCCGCCAGCAACAATAGCAACAGCCT...CACGTCGTTAGAACGTTGTTGGACACCATGTTGAATTATTCCCCCATCGGTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678917.1
CDS-3UTR CAA 90 bp TTTCATGACGAGCATGTCTGTCCAGCTATCAATCATGTTTGTTTGCACCAAATCGAAGGCAGGAGCCCATaGGCGTGGGCCAGGTCCCCC +
Preference number: 5 (lower is better)
Translates to: FHDEHVCPAINHVCLHQIEGRSP*AWARSP
Trigger: GGGGGACCTGGCCCACGCCAATGGGCTCCTGCCTTC...GATTTGGTGCAAACAAACATGATTGATAGCTGGACAGACATGCTCGTCATGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678917.1
CDS-3UTR CAA 90 bp GTTACTATGAAGCAAGGTGTAAATGTTTGGCCCCAATCGGGCTTCAGAAATGGTAGGCTGTTGCTATTGTaGCTGGCGGCGGAGGGGGCG +
Preference number: 5 (lower is better)
Translates to: VTMKQGVNVWPQSGFRNGRLLLL*LAAEGA
Trigger: CGCCCCCTCCGCCGCCAGCAACAATAGCAACAGCCT...ACCATTTCTGAAGCCCGATTGGGGCCAAACATTTACACCTTGCTTCATAGTAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678917.1
CDS CCA 90 bp CCATTCAAGTGCTGTCCTATTAGCCTAATGACATCCTCATCTGACTaGGAGAGCCGCTTCTTCTTCTTGAGGCTGCTGCCCAGTTCTGGG +
Preference number: 5 (lower is better)
Translates to: PFKCCPISLMTSSSD*ESRFFFLRLLPSSG
Trigger: CCCAGAACTGGGCAGCAGCCTCAAGAAGAAGAAGCGGCTCTCCCAGTCAGATGAGGATGTCATTAGGCTAATAGGACAGCACTTGAATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000414423.9
ENST00000443112.6
ENST00000477425.1
ENST00000479778.1
ENST00000486652.5
ENST00000489825.5
ENST00000651911.2
ENST00000678307.1
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CAA 90 bp TTTTTCATGACGAGCATGTCTGTCCAGCTATCAATCATGTTTGTTTGCACCAAAGAAGGCAGGAGCCCATaGGCGTGGGCCAGGTCCCCC +
Preference number: 5 (lower is better)
Translates to: FFMTSMSVQLSIMFVCTKEGRSP*AWARSP
Trigger: GGGGGACCTGGCCCACGCCAATGGGCTCCTGCCTTC...TTTGGTGCAAACAAACATGATTGATAGCTGGACAGACATGCTCGTCATGAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678917.1
CDS-3UTR CAA 90 bp TCTGAAATGGAAGTAATGTGTTGGAGGGCAACCCAAAAGGACAGTTGCGAAATTAGGCTGTTGCTATTGTaGCTGGCGGCGGAGGGGGCG +
Preference number: 5 (lower is better)
Translates to: SEMEVMCWRATQKDSCEIRLLLL*LAAEGA
Trigger: CGCCCCCTCCGCCGCCAGCAACAATAGCAACAGCCT...AATTTCGCAACTGTCCTTTTGGGTTGCCCTCCAACACATTACTTCCATTTCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678917.1
CDS-3UTR CAA 90 bp CTGAATGTAGCACAGTTCTTCACAACCGATGGGGGAATAATTCAACATGGTGTCTTCAGGCTGTTGCTATaGTTGCTGGCGGCGGAGGGG +
Preference number: 5 (lower is better)
Translates to: LNVAQFFTTDGGIIQHGVFRLLL*LLAAEG
Trigger: CCCCTCCGCCGCCAGCAACAATAGCAACAGCCTGAA...GACACCATGTTGAATTATTCCCCCATCGGTTGTGAAGAACTGTGCTACATTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678917.1
CDS-3UTR CAA 90 bp GTGTCCAACAACGTTCTAACGACGTGCTTCATCTCAACTGGTTACTATGAAGCATTCAGGCTGTTGCTATaGTTGCTGGCGGCGGAGGGG +
Preference number: 5 (lower is better)
Translates to: VSNNVLTTCFISTGYYEAFRLLL*LLAAEG
Trigger: CCCCTCCGCCGCCAGCAACAATAGCAACAGCCTGAA...TGCTTCATAGTAACCAGTTGAGATGAAGCACGTCGTTAGAACGTTGTTGGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678917.1
CDS-3UTR CAA 90 bp TACTGCGCAACGGGCAAGGCTAGAATCCATGAACCAAGCTGCAAAGATCTCAAGCCGGGAACCCCGTTATaGACATTCAGGCTGTTGCTA +
Preference number: 5 (lower is better)
Translates to: YCATGKARIHEPSCKDLKPGTPL*TFRLLL
Trigger: TAGCAACAGCCTGAATGTCAATAACGGGGTTCCCGG...CTTGAGATCTTTGCAGCTTGGTTCATGGATTCTAGCCTTGCCCGTTGCGCAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678917.1
CDS-3UTR CAA 90 bp GTGCACGAGACTTTCAGTAAAAATGACAAGATCCTAGAACAGCTGTTTCCAGGATTCAGGCTGTTGCTATaGTTGCTGGCGGCGGAGGGG +
Preference number: 5 (lower is better)
Translates to: VHETFSKNDKILEQLFPGFRLLL*LLAAEG
Trigger: CCCCTCCGCCGCCAGCAACAATAGCAACAGCCTGAA...TCCTGGAAACAGCTGTTCTAGGATCTTGTCATTTTTACTGAAAGTCTCGTGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678917.1
CDS-3UTR CAA 90 bp AAGGCTAGAATCCATGAACCAAGCTGCAAAGATCTCAAGCTAAATAAGGCGGAATTCAGGCTGTTGCTATaGTTGCTGGCGGCGGAGGGG +
Preference number: 5 (lower is better)
Translates to: KARIHEPSCKDLKLNKAEFRLLL*LLAAEG
Trigger: CCCCTCCGCCGCCAGCAACAATAGCAACAGCCTGAA...TTCCGCCTTATTTAGCTTGAGATCTTTGCAGCTTGGTTCATGGATTCTAGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678917.1
CDS-3UTR CAA 90 bp ATCTGGATCAGTATATACTGCGCAACGGGCAAGGCTAGAATCCATGAACCAAGCCCGGGAACCCCGTTATaGACATTCAGGCTGTTGCTA +
Preference number: 5 (lower is better)
Translates to: IWISIYCATGKARIHEPSPGTPL*TFRLLL
Trigger: TAGCAACAGCCTGAATGTCAATAACGGGGTTCCCGG...GCTTGGTTCATGGATTCTAGCCTTGCCCGTTGCGCAGTATATACTGATCCAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678917.1
CDS-3UTR CAA 90 bp ATCTGGATCAGTATATACTGCGCAACGGGCAAGGCTAGAATCCATGAACCAAGCCAAGCACCAAAGGCATaGCACTCTTACCCCTTCCCA +
Preference number: 5 (lower is better)
Translates to: IWISIYCATGKARIHEPSQAPKA*HSYPFP
Trigger: TGGGAAGGGGTAAGAGTGCAATGCCTTTGGTGCTTG...GCTTGGTTCATGGATTCTAGCCTTGCCCGTTGCGCAGTATATACTGATCCAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CAA 90 bp GTAGAACTTGAAGTGCCTCCAGGACCTTGCCATCCTCCAGGTATTCTAGGTACTCTGTCAGCTCCGCAATaGGCAGTTCACTACGTTTGT +
Preference number: 5 (lower is better)
Translates to: VELEVPPGPCHPPGILGTLSAPQ*AVHYVC
Trigger: ACAAACGTAGTGAACTGCCAATTGCGGAGCTGACAG...AGTACCTAGAATACCTGGAGGATGGCAAGGTCCTGGAGGCACTTCAAGTTCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486652.5
CDS-3UTR CAA 90 bp CCAATGTATACTCTTCAGACTAATGCACTCTTTCTATCAAGCCTTCTAAACTGTAGGCTGTTGCTATTGTaGCTGGCGGCGGAGGGGGCG +
Preference number: 5 (lower is better)
Translates to: PMYTLQTNALFLSSLLNCRLLLL*LAAEGA
Trigger: CGCCCCCTCCGCCGCCAGCAACAATAGCAACAGCCT...ACAGTTTAGAAGGCTTGATAGAAAGAGTGCATTAGTCTGAAGAGTATACATTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678917.1
CDS-3UTR CAA 90 bp AAGTTAAACAGAAGTCGTCTGCTCCAAATTCACCATCAACTATCCATGCTACTGTTCAGGCTGTTGCTATaGTTGCTGGCGGCGGAGGGG +
Preference number: 5 (lower is better)
Translates to: KLNRSRLLQIHHQLSMLLFRLLL*LLAAEG
Trigger: CCCCTCCGCCGCCAGCAACAATAGCAACAGCCTGAA...CAGTAGCATGGATAGTTGATGGTGAATTTGGAGCAGACGACTTCTGTTTAACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486652.5
CDS-3UTR CAA 90 bp TACTGCGCAACGGGCAAGGCTAGAATCCATGAACCAAGCTGCAAAGATCTCAAGAGATCAACAGTCTGGTaGAGCCCTAAGCCATTCAAG +
Preference number: 5 (lower is better)
Translates to: YCATGKARIHEPSCKDLKRSTVW*SPKPFK
Trigger: CTTGAATGGCTTAGGGCTCAACCAGACTGTTGATCT...CTTGAGATCTTTGCAGCTTGGTTCATGGATTCTAGCCTTGCCCGTTGCGCAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CAA 90 bp TCAACTGGTTACTATGAAGCAAGGTGTAAATGTTTGGCCCCAATCGGGCTTCAGCAAGCACCAAAGGCATaGCACTCTTACCCCTTCCCA +
Preference number: 5 (lower is better)
Translates to: STGYYEARCKCLAPIGLQQAPKA*HSYPFP
Trigger: TGGGAAGGGGTAAGAGTGCAATGCCTTTGGTGCTTG...CTGAAGCCCGATTGGGGCCAAACATTTACACCTTGCTTCATAGTAACCAGTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CAA 90 bp TTCACTGGTTTATCATCTGGATCAGTATATACTGCGCAACGGGCAAGGCTAGAATTGACATTCAGGCTGTaGCTATTGTTGCTGGCGGCG +
Preference number: 5 (lower is better)
Translates to: FTGLSSGSVYTAQRARLELTFRL*LLLLAA
Trigger: CGCCGCCAGCAACAATAGCAACAGCCTGAATGTCAA...TTCTAGCCTTGCCCGTTGCGCAGTATATACTGATCCAGATGATAAACCAGTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678917.1
CDS-3UTR CAA 90 bp ATCTGGATCAGTATATACTGCGCAACGGGCAAGGCTAGAATCCATGAACCAAGCAGATCAACAGTCTGGTaGAGCCCTAAGCCATTCAAG +
Preference number: 5 (lower is better)
Translates to: IWISIYCATGKARIHEPSRSTVW*SPKPFK
Trigger: CTTGAATGGCTTAGGGCTCAACCAGACTGTTGATCT...GCTTGGTTCATGGATTCTAGCCTTGCCCGTTGCGCAGTATATACTGATCCAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CAA 90 bp TTCACTGGTTTATCATCTGGATCAGTATATACTGCGCAACGGGCAAGGCTAGAACGGGAAGCTGTCCCTTaGCCTTCCCATTCTGCTTTT +
Preference number: 5 (lower is better)
Translates to: FTGLSSGSVYTAQRARLEREAVP*PSHSAF
Trigger: AAAAGCAGAATGGGAAGGCAAAGGGACAGCTTCCCG...TTCTAGCCTTGCCCGTTGCGCAGTATATACTGATCCAGATGATAAACCAGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CAA 90 bp ACAGAAGTCGTCTGCTCCAAATTCACCATCAACTATCCATGCTACTGCATTCCTCAAGCACCAAAGGCATaGCACTCTTACCCCTTCCCA +
Preference number: 5 (lower is better)
Translates to: TEVVCSKFTINYPCYCIPQAPKA*HSYPFP
Trigger: TGGGAAGGGGTAAGAGTGCAATGCCTTTGGTGCTTG...AGGAATGCAGTAGCATGGATAGTTGATGGTGAATTTGGAGCAGACGACTTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486652.5
CDS-3UTR CAA 90 bp ATCAGTATATACTGCGCAACGGGCAAGGCTAGAATCCATGAACCAAGCTGCAAACTGTCAGCTCCGCAATaGGCAGTTCACTACGTTTGT +
Preference number: 5 (lower is better)
Translates to: ISIYCATGKARIHEPSCKLSAPQ*AVHYVC
Trigger: ACAAACGTAGTGAACTGCCAATTGCGGAGCTGACAG...TTTGCAGCTTGGTTCATGGATTCTAGCCTTGCCCGTTGCGCAGTATATACTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CAA 90 bp GTTACTATGAAGCAAGGTGTAAATGTTTGGCCCCAATCGGGCTTCAGAAATGGTGCAAGGTGTAAATGTTaGGCCCCAATCGGGCTTCAG +
Preference number: 5 (lower is better)
Translates to: VTMKQGVNVWPQSGFRNGARCKC*APIGLQ
Trigger: CTGAAGCCCGATTGGGGCCAAACATTTACACCTTGC...ACCATTTCTGAAGCCCGATTGGGGCCAAACATTTACACCTTGCTTCATAGTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CAA 90 bp TCAACTGGTTACTATGAAGCAAGGTGTAAATGTTTGGCCCCAATCGGGCTTCAGACCAAAGCTGAAGCTTaGTCATCCCTCCCCACTAAC +
Preference number: 5 (lower is better)
Translates to: STGYYEARCKCLAPIGLQTKAEA*SSLPTN
Trigger: GTTAGTGGGGAGGGATGACAAAGCTTCAGCTTTGGT...CTGAAGCCCGATTGGGGCCAAACATTTACACCTTGCTTCATAGTAACCAGTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS TCA 90 bp TTTCCAAATGATCCCAGCCCCTCCGTTCCCATAAACACTTGTAGGTaGTTGTCTTTCCTGATTGGTAGTTTGCTTGGGTTGTTGTCTGCC +
Preference number: 5 (lower is better)
Translates to: FPNDPSPSVPINTCR*LSFLIGSLLGLLSA
Trigger: GGCAGACAACAACCCAAGCAAACTACCAATCAGGAAAGACAATCACCTACAAGTGTTTATGGGAACGGAGGGGCTGGGATCATTTGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678307.1
CDS GCA 90 bp CGGAATTTGGTAGCAGAAGGATGTTCTAAACGACATCCTGACTCTTaGATGAGGAGATCAACAGTCTGGTTGAGCCCTAAGCCATTCAAG +
Preference number: 5 (lower is better)
Translates to: RNLVAEGCSKRHPDS*MRRSTVWLSPKPFK
Trigger: CTTGAATGGCTTAGGGCTCAACCAGACTGTTGATCTCCTCATGCAAGAGTCAGGATGTCGTTTAGAACATCCTTCTGCTACCAAATTCCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000414423.9
ENST00000443112.6
ENST00000479778.1
ENST00000486652.5
ENST00000489825.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CAA 90 bp ATGATCTTCTTGTACTATGTTCCTATCTGTAAGGTCCTCGAAGTTATAGCCCCGTTGACATTCAGGCTGTaGCTATTGTTGCTGGCGGCG +
Preference number: 5 (lower is better)
Translates to: MIFLYYVPICKVLEVIAPLTFRL*LLLLAA
Trigger: CGCCGCCAGCAACAATAGCAACAGCCTGAATGTCAA...CGGGGCTATAACTTCGAGGACCTTACAGATAGGAACATAGTACAAGAAGATCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486652.5
CDS-3UTR CAA 90 bp AGCATGTCTGTCCAGCTATCAATCATGTTTGTTTGCACCAAATCCCAAGCCATTTTGACATTCAGGCTGTaGCTATTGTTGCTGGCGGCG +
Preference number: 5 (lower is better)
Translates to: SMSVQLSIMFVCTKSQAILTFRL*LLLLAA
Trigger: CGCCGCCAGCAACAATAGCAACAGCCTGAATGTCAA...AATGGCTTGGGATTTGGTGCAAACAAACATGATTGATAGCTGGACAGACATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678917.1
CDS-3UTR CAA 90 bp TCTCAACTGGTTACTATGAAGCAAGGTGTAAATGTTTGGCCCCAATCGGGCTTCCTTCCCATTCTGCTTTaGCACGTAGGTCTTCTGCAT +
Preference number: 5 (lower is better)
Translates to: SQLVTMKQGVNVWPQSGFLPILL*HVGLLH
Trigger: ATGCAGAAGACCTACGTGCAAAAGCAGAATGGGAAG...GAAGCCCGATTGGGGCCAAACATTTACACCTTGCTTCATAGTAACCAGTTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CAA 90 bp ACAACCGATGGGGGAATAATTCAACATGGTGTCCAACAACGTTCTAACGACGTGCTTCCCATTCTGCTTTaGCACGTAGGTCTTCTGCAT +
Preference number: 5 (lower is better)
Translates to: TTDGGIIQHGVQQRSNDVLPILL*HVGLLH
Trigger: ATGCAGAAGACCTACGTGCAAAAGCAGAATGGGAAG...CACGTCGTTAGAACGTTGTTGGACACCATGTTGAATTATTCCCCCATCGGTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CAA 90 bp ATCTGGATCAGTATATACTGCGCAACGGGCAAGGCTAGAATCCATGAACCAAGCGATTCCAAGCCACACTaGTCAAACTGTCTTCATGAG +
Preference number: 5 (lower is better)
Translates to: IWISIYCATGKARIHEPSDSKPH*SNCLHE
Trigger: CTCATGAAGACAGTTTGACAAGTGTGGCTTGGAATC...GCTTGGTTCATGGATTCTAGCCTTGCCCGTTGCGCAGTATATACTGATCCAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CAA 90 bp TGTAGCACAGTTCTTCACAACCGATGGGGGAATAATTCAACATGGTGTCCAACACTGTCAGCTCCGCAATaGGCAGTTCACTACGTTTGT +
Preference number: 5 (lower is better)
Translates to: CSTVLHNRWGNNSTWCPTLSAPQ*AVHYVC
Trigger: ACAAACGTAGTGAACTGCCAATTGCGGAGCTGACAG...TGTTGGACACCATGTTGAATTATTCCCCCATCGGTTGTGAAGAACTGTGCTACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CAA 90 bp ACAACCGATGGGGGAATAATTCAACATGGTGTCCAACAACGTTCTAACGACGTGTATTCCCAACAACGTTaGAGAGATTTCAAGTGCGCC +
Preference number: 5 (lower is better)
Translates to: TTDGGIIQHGVQQRSNDVYSQQR*RDFKCA
Trigger: GGCGCACTTGAAATCTCTCAAACGTTGTTGGGAATA...CACGTCGTTAGAACGTTGTTGGACACCATGTTGAATTATTCCCCCATCGGTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CAA 90 bp GTGGATCTATTCCCCTCGCCACACACACACATTTTCAAGGAGCCAATAACATTTCTTCCCATTCTGCTTTaGCACGTAGGTCTTCTGCAT +
Preference number: 5 (lower is better)
Translates to: VDLFPSPHTHIFKEPITFLPILL*HVGLLH
Trigger: ATGCAGAAGACCTACGTGCAAAAGCAGAATGGGAAG...AAATGTTATTGGCTCCTTGAAAATGTGTGTGTGTGGCGAGGGGAATAGATCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CAA 90 bp CATGCTACTGCATTCCTCTTCAATATTCTGGTGGTCTATAAAAGGTGCTGGTCCCTTCCCATTCTGCTTTaGCACGTAGGTCTTCTGCAT +
Preference number: 5 (lower is better)
Translates to: HATAFLFNILVVYKRCWSLPILL*HVGLLH
Trigger: ATGCAGAAGACCTACGTGCAAAAGCAGAATGGGAAG...GGACCAGCACCTTTTATAGACCACCAGAATATTGAAGAGGAATGCAGTAGCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486652.5
CDS-3UTR CAA 90 bp GAACCAAGCTGCAAAGATCTCAAGCTAAATAAGGCGGAAAGATTTGGAGAAACACGGGAAGCTGTCCCTTaGCCTTCCCATTCTGCTTTT +
Preference number: 5 (lower is better)
Translates to: EPSCKDLKLNKAERFGETREAVP*PSHSAF
Trigger: AAAAGCAGAATGGGAAGGCAAAGGGACAGCTTCCCG...TGTTTCTCCAAATCTTTCCGCCTTATTTAGCTTGAGATCTTTGCAGCTTGGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CAA 90 bp TTTCATGACGAGCATGTCTGTCCAGCTATCAATCATGTTTGTTTGCACCAAATCCGGGAAGCTGTCCCTTaGCCTTCCCATTCTGCTTTT +
Preference number: 5 (lower is better)
Translates to: FHDEHVCPAINHVCLHQIREAVP*PSHSAF
Trigger: AAAAGCAGAATGGGAAGGCAAAGGGACAGCTTCCCG...GATTTGGTGCAAACAAACATGATTGATAGCTGGACAGACATGCTCGTCATGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CAA 90 bp GAACCAAGCTGCAAAGATCTCAAGCTAAATAAGGCGGAAAGATTTGGAGAAACACAAGCACCAAAGGCATaGCACTCTTACCCCTTCCCA +
Preference number: 5 (lower is better)
Translates to: EPSCKDLKLNKAERFGETQAPKA*HSYPFP
Trigger: TGGGAAGGGGTAAGAGTGCAATGCCTTTGGTGCTTG...TGTTTCTCCAAATCTTTCCGCCTTATTTAGCTTGAGATCTTTGCAGCTTGGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CAA 90 bp TACACAGAAGAGCAACAAGAATGGTATCCTGCCAGACAAAAGACAGGAAGGAAACTGTCAGCTCCGCAATaGGCAGTTCACTACGTTTGT +
Preference number: 5 (lower is better)
Translates to: YTEEQQEWYPARQKTGRKLSAPQ*AVHYVC
Trigger: ACAAACGTAGTGAACTGCCAATTGCGGAGCTGACAG...TTTCCTTCCTGTCTTTTGTCTGGCAGGATACCATTCTTGTTGCTCTTCTGTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CAA 90 bp GTTTCTGACCATGTCTCATGTGGTATTCCAGAAGAGCATCAGTTATACTGTGTAGCAAGGTGTAAATGTTaGGCCCCAATCGGGCTTCAG +
Preference number: 5 (lower is better)
Translates to: VSDHVSCGIPEEHQLYCVARCKC*APIGLQ
Trigger: CTGAAGCCCGATTGGGGCCAAACATTTACACCTTGC...TACACAGTATAACTGATGCTCTTCTGGAATACCACATGAGACATGGTCAGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CAA 90 bp TTAAGACAGACCCGGAAAACAAACTCACCTAGCTGCTATAGAAACCTTTGCATAGCAAGGTGTAAATGTTaGGCCCCAATCGGGCTTCAG +
Preference number: 5 (lower is better)
Translates to: LRQTRKTNSPSCYRNLCIARCKC*APIGLQ
Trigger: CTGAAGCCCGATTGGGGCCAAACATTTACACCTTGC...TATGCAAAGGTTTCTATAGCAGCTAGGTGAGTTTGTTTTCCGGGTCTGTCTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CAA 90 bp TCATCTGGATCAGTATATACTGCGCAACGGGCAAGGCTAGAATCCATGAACCAACACCAGAATCTTATTTaGGGGGTATCCCCATTCTCA +
Preference number: 5 (lower is better)
Translates to: SSGSVYTAQRARLESMNQHQNLI*GVSPFS
Trigger: TGAGAATGGGGATACCCCCAAAATAAGATTCTGGTG...TTGGTTCATGGATTCTAGCCTTGCCCGTTGCGCAGTATATACTGATCCAGATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CAA 90 bp ACAACCGATGGGGGAATAATTCAACATGGTGTCCAACAACGTTCTAACGACGTGCAAGCCCTCTTCTCTTaGTGGATTCTGGAGTCTATT +
Preference number: 5 (lower is better)
Translates to: TTDGGIIQHGVQQRSNDVQALFS*WILESI
Trigger: AATAGACTCCAGAATCCACAAAGAGAAGAGGGCTTG...CACGTCGTTAGAACGTTGTTGGACACCATGTTGAATTATTCCCCCATCGGTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CAA 90 bp AAGCCTGAATGTAGCACAGTTCTTCACAACCGATGGGGGAATAATTCAACATGGAATCTGAGTGCCAAATaGCCCCTGAATGGGCACAAA +
Preference number: 5 (lower is better)
Translates to: KPECSTVLHNRWGNNSTWNLSAK*PLNGHK
Trigger: TTTGTGCCCATTCAGGGGCAATTTGGCACTCAGATT...CCATGTTGAATTATTCCCCCATCGGTTGTGAAGAACTGTGCTACATTCAGGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CAA 90 bp GTGGATCTATTCCCCTCGCCACACACACACATTTTCAAGGAGCCAATAACATTTAATCTGAGTGCCAAATaGCCCCTGAATGGGCACAAA +
Preference number: 5 (lower is better)
Translates to: VDLFPSPHTHIFKEPITFNLSAK*PLNGHK
Trigger: TTTGTGCCCATTCAGGGGCAATTTGGCACTCAGATT...AAATGTTATTGGCTCCTTGAAAATGTGTGTGTGTGGCGAGGGGAATAGATCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CAA 90 bp TCTCAACTGGTTACTATGAAGCAAGGTGTAAATGTTTGGCCCCAATCGGGCTTCAGTACATACATGCTTTaGTGGATCTATTCCCCTCGC +
Preference number: 5 (lower is better)
Translates to: SQLVTMKQGVNVWPQSGFSTYML*WIYSPR
Trigger: GCGAGGGGAATAGATCCACAAAAGCATGTATGTACT...GAAGCCCGATTGGGGCCAAACATTTACACCTTGCTTCATAGTAACCAGTTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS TCA 90 bp CGCTTCCCATCTGGATTCCAAGCCACACTTGTCAAACTGTCTTCATaGGACTGGCTCATTTTTGTCCTTAGTTCTCCTGTTTGTACATTC +
Preference number: 5 (lower is better)
Translates to: RFPSGFQATLVKLSS*DWLIFVLSSPVCTF
Trigger: GAATGTACAAACAGGAGAACTAAGGACAAAAATGAGCCAGTCTCATGAAGACAGTTTGACAAGTGTGGCTTGGAATCCAGATGGGAAGCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000480676.2
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CAA 90 bp TTTTTCATGACGAGCATGTCTGTCCAGCTATCAATCATGTTTGTTTGCACCAAATTGACATTCAGGCTGTaGCTATTGTTGCTGGCGGCG +
Preference number: 5 (lower is better)
Translates to: FFMTSMSVQLSIMFVCTKLTFRL*LLLLAA
Trigger: CGCCGCCAGCAACAATAGCAACAGCCTGAATGTCAA...TTTGGTGCAAACAAACATGATTGATAGCTGGACAGACATGCTCGTCATGAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678917.1
CDS-3UTR CAA 90 bp TTGTTAGTATCTTGTGGCTGGCTTCATAGTATAAGACTCACTCTTAAGCCTACTCCGGGAACCCCGTTATaGACATTCAGGCTGTTGCTA +
Preference number: 5 (lower is better)
Translates to: LLVSCGWLHSIRLTLKPTPGTPL*TFRLLL
Trigger: TAGCAACAGCCTGAATGTCAATAACGGGGTTCCCGG...AGTAGGCTTAAGAGTGAGTCTTATACTATGAAGCCAGCCACAAGATACTAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678917.1
CDS-3UTR CAA 90 bp AGCATGTCTGTCCAGCTATCAATCATGTTTGTTTGCACCAAATCCCAAGCCATTAGATCAACAGTCTGGTaGAGCCCTAAGCCATTCAAG +
Preference number: 5 (lower is better)
Translates to: SMSVQLSIMFVCTKSQAIRSTVW*SPKPFK
Trigger: CTTGAATGGCTTAGGGCTCAACCAGACTGTTGATCT...AATGGCTTGGGATTTGGTGCAAACAAACATGATTGATAGCTGGACAGACATGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CAA 90 bp GTGCACGAGACTTTCAGTAAAAATGACAAGATCCTAGAACAGCTGTTTCCAGGAAGATCAACAGTCTGGTaGAGCCCTAAGCCATTCAAG +
Preference number: 5 (lower is better)
Translates to: VHETFSKNDKILEQLFPGRSTVW*SPKPFK
Trigger: CTTGAATGGCTTAGGGCTCAACCAGACTGTTGATCT...TCCTGGAAACAGCTGTTCTAGGATCTTGTCATTTTTACTGAAAGTCTCGTGCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CAA 90 bp GTTACTATGAAGCAAGGTGTAAATGTTTGGCCCCAATCGGGCTTCAGAAATGGTTATTCCCAACAACGTTaGAGAGATTTCAAGTGCGCC +
Preference number: 5 (lower is better)
Translates to: VTMKQGVNVWPQSGFRNGYSQQR*RDFKCA
Trigger: GGCGCACTTGAAATCTCTCAAACGTTGTTGGGAATA...ACCATTTCTGAAGCCCGATTGGGGCCAAACATTTACACCTTGCTTCATAGTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CAA 90 bp GCACAGTTCTTCACAACCGATGGGGGAATAATTCAACATGGTGTCCAACAACGTGAGACTGGCTCATTTTaGTCCTTAGTTCTCCTGTTT +
Preference number: 5 (lower is better)
Translates to: AQFFTTDGGIIQHGVQQRETGSF*SLVLLF
Trigger: AAACAGGAGAACTAAGGACAAAAATGAGCCAGTCTC...ACGTTGTTGGACACCATGTTGAATTATTCCCCCATCGGTTGTGAAGAACTGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CAA 90 bp AAGCCTGAATGTAGCACAGTTCTTCACAACCGATGGGGGAATAATTCAACATGGGATTCCAAGCCACACTaGTCAAACTGTCTTCATGAG +
Preference number: 5 (lower is better)
Translates to: KPECSTVLHNRWGNNSTWDSKPH*SNCLHE
Trigger: CTCATGAAGACAGTTTGACAAGTGTGGCTTGGAATC...CCATGTTGAATTATTCCCCCATCGGTTGTGAAGAACTGTGCTACATTCAGGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CAA 90 bp TTTCATGACGAGCATGTCTGTCCAGCTATCAATCATGTTTGTTTGCACCAAATCCTGTCAGCTCCGCAATaGGCAGTTCACTACGTTTGT +
Preference number: 5 (lower is better)
Translates to: FHDEHVCPAINHVCLHQILSAPQ*AVHYVC
Trigger: ACAAACGTAGTGAACTGCCAATTGCGGAGCTGACAG...GATTTGGTGCAAACAAACATGATTGATAGCTGGACAGACATGCTCGTCATGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CAA 90 bp TCCAAATTCACCATCAACTATCCATGCTACTGCATTCCTCTTCAATATTCTGGTGCAAGGTGTAAATGTTaGGCCCCAATCGGGCTTCAG +
Preference number: 5 (lower is better)
Translates to: SKFTINYPCYCIPLQYSGARCKC*APIGLQ
Trigger: CTGAAGCCCGATTGGGGCCAAACATTTACACCTTGC...ACCAGAATATTGAAGAGGAATGCAGTAGCATGGATAGTTGATGGTGAATTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486652.5
CDS-3UTR CAA 90 bp TGTAGCACAGTTCTTCACAACCGATGGGGGAATAATTCAACATGGTGTCCAACACACCAGAATCTTATTTaGGGGGTATCCCCATTCTCA +
Preference number: 5 (lower is better)
Translates to: CSTVLHNRWGNNSTWCPTHQNLI*GVSPFS
Trigger: TGAGAATGGGGATACCCCCAAAATAAGATTCTGGTG...TGTTGGACACCATGTTGAATTATTCCCCCATCGGTTGTGAAGAACTGTGCTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CAA 90 bp GACATAGTTCACTGGTTTATCATCTGGATCAGTATATACTGCGCAACGGGCAAGCAAGCCCTCTTCTCTTaGTGGATTCTGGAGTCTATT +
Preference number: 5 (lower is better)
Translates to: DIVHWFIIWISIYCATGKQALFS*WILESI
Trigger: AATAGACTCCAGAATCCACAAAGAGAAGAGGGCTTG...CTTGCCCGTTGCGCAGTATATACTGATCCAGATGATAAACCAGTGAACTATGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CAA 90 bp GTAAGCCTGAATGTAGCACAGTTCTTCACAACCGATGGGGGAATAATTCAACATAATCTGAGTGCCAAATaGCCCCTGAATGGGCACAAA +
Preference number: 5 (lower is better)
Translates to: VSLNVAQFFTTDGGIIQHNLSAK*PLNGHK
Trigger: TTTGTGCCCATTCAGGGGCAATTTGGCACTCAGATT...ATGTTGAATTATTCCCCCATCGGTTGTGAAGAACTGTGCTACATTCAGGCTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CAA 90 bp AAAGGCATTGCACTCTTACCCCTTCCCAGGAGTCAAGGAGATTACCATCTAAGTGAAACACGGTCTTCCTaGCTTCTTTTCCCAATCAAT +
Preference number: 5 (lower is better)
Translates to: KGIALLPLPRSQGDYHLSETRSS*LLFPIN
Trigger: ATTGATTGGGAAAAGAAGCAAGGAAGACCGTGTTTC...ACTTAGATGGTAATCTCCTTGACTCCTGGGAAGGGGTAAGAGTGCAATGCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486652.5
CDS-3UTR CAA 90 bp CTTCCCATCTGGATTCCAAGCCACACTTGTCAAACTGTCTTCATGAGACTGGCTATGGGGATAGTTTTCTaGTACATTCCAAAGCCAAAG +
Preference number: 5 (lower is better)
Translates to: LPIWIPSHTCQTVFMRLAMGIVF*YIPKPK
Trigger: CTTTGGCTTTGGAATGTACAAGAAAACTATCCCCAT...AGCCAGTCTCATGAAGACAGTTTGACAAGTGTGGCTTGGAATCCAGATGGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486652.5
CDS-3UTR CAA 90 bp AGCTGCAAAGATCTCAAGCTAAATAAGGCGGAAAGATTTGGAGAAACAAAAGAATTGACATTCAGGCTGTaGCTATTGTTGCTGGCGGCG +
Preference number: 5 (lower is better)
Translates to: SCKDLKLNKAERFGETKELTFRL*LLLLAA
Trigger: CGCCGCCAGCAACAATAGCAACAGCCTGAATGTCAA...TTCTTTTGTTTCTCCAAATCTTTCCGCCTTATTTAGCTTGAGATCTTTGCAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678917.1
CDS-3UTR CAA 90 bp CAGCTATCAATCATGTTTGTTTGCACCAAATCCCAAGCCATTAAAATACGACTACCGGGAACCCCGTTATaGACATTCAGGCTGTTGCTA +
Preference number: 5 (lower is better)
Translates to: QLSIMFVCTKSQAIKIRLPGTPL*TFRLLL
Trigger: TAGCAACAGCCTGAATGTCAATAACGGGGTTCCCGG...TAGTCGTATTTTAATGGCTTGGGATTTGGTGCAAACAAACATGATTGATAGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678917.1
CDS-3UTR CAA 90 bp CCAATGTATACTCTTCAGACTAATGCACTCTTTCTATCAAGCCTTCTAAACTGTCCGGGAACCCCGTTATaGACATTCAGGCTGTTGCTA +
Preference number: 5 (lower is better)
Translates to: PMYTLQTNALFLSSLLNCPGTPL*TFRLLL
Trigger: TAGCAACAGCCTGAATGTCAATAACGGGGTTCCCGG...ACAGTTTAGAAGGCTTGATAGAAAGAGTGCATTAGTCTGAAGAGTATACATTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678917.1
CDS-3UTR CAA 90 bp TCTGAAATGGAAGTAATGTGTTGGAGGGCAACCCAAAAGGACAGTTGCGAAATTTATTCCCAACAACGTTaGAGAGATTTCAAGTGCGCC +
Preference number: 5 (lower is better)
Translates to: SEMEVMCWRATQKDSCEIYSQQR*RDFKCA
Trigger: GGCGCACTTGAAATCTCTCAAACGTTGTTGGGAATA...AATTTCGCAACTGTCCTTTTGGGTTGCCCTCCAACACATTACTTCCATTTCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414423.9
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CAA 90 bp TTTCATGACGAGCATGTCTGTCCAGCTATCAATCATGTTTGTTTGCACCAAATCCTTCCCATTCTGCTTTaGCACGTAGGTCTTCTGCAT +
Preference number: 5 (lower is better)
Translates to: FHDEHVCPAINHVCLHQILPILL*HVGLLH
Trigger: ATGCAGAAGACCTACGTGCAAAAGCAGAATGGGAAG...GATTTGGTGCAAACAAACATGATTGATAGCTGGACAGACATGCTCGTCATGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CAA 90 bp CCAATGTATACTCTTCAGACTAATGCACTCTTTCTATCAAGCCTTCTAAACTGTCGGGAAGCTGTCCCTTaGCCTTCCCATTCTGCTTTT +
Preference number: 5 (lower is better)
Translates to: PMYTLQTNALFLSSLLNCREAVP*PSHSAF
Trigger: AAAAGCAGAATGGGAAGGCAAAGGGACAGCTTCCCG...ACAGTTTAGAAGGCTTGATAGAAAGAGTGCATTAGTCTGAAGAGTATACATTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CAA 90 bp CTCTCTCTCACACACACACAGAACACACACACACATTTTTATACTATTGGTTTTCGGGAAGCTGTCCCTTaGCCTTCCCATTCTGCTTTT +
Preference number: 5 (lower is better)
Translates to: LSLTHTQNTHTHFYTIGFREAVP*PSHSAF
Trigger: AAAAGCAGAATGGGAAGGCAAAGGGACAGCTTCCCG...AAAACCAATAGTATAAAAATGTGTGTGTGTGTTCTGTGTGTGTGTGAGAGAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CAA 90 bp GTTCACTGGTTTATCATCTGGATCAGTATATACTGCGCAACGGGCAAGGCTAGATGTATCCGGATCAACTaGCCATATGATAACTGTTGT +
Preference number: 5 (lower is better)
Translates to: VHWFIIWISIYCATGKARCIRIN*PYDNCC
Trigger: ACAACAGTTATCATATGGCAAGTTGATCCGGATACA...TCTAGCCTTGCCCGTTGCGCAGTATATACTGATCCAGATGATAAACCAGTGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CAA 90 bp GACATAGTTCACTGGTTTATCATCTGGATCAGTATATACTGCGCAACGGGCAAGGAGACTGGCTCATTTTaGTCCTTAGTTCTCCTGTTT +
Preference number: 5 (lower is better)
Translates to: DIVHWFIIWISIYCATGKETGSF*SLVLLF
Trigger: AAACAGGAGAACTAAGGACAAAAATGAGCCAGTCTC...CTTGCCCGTTGCGCAGTATATACTGATCCAGATGATAAACCAGTGAACTATGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CAA 90 bp TACACAGAAGAGCAACAAGAATGGTATCCTGCCAGACAAAAGACAGGAAGGAAAGATTCCAAGCCACACTaGTCAAACTGTCTTCATGAG +
Preference number: 5 (lower is better)
Translates to: YTEEQQEWYPARQKTGRKDSKPH*SNCLHE
Trigger: CTCATGAAGACAGTTTGACAAGTGTGGCTTGGAATC...TTTCCTTCCTGTCTTTTGTCTGGCAGGATACCATTCTTGTTGCTCTTCTGTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CAA 90 bp CTCTCTCTCACACACACACAGAACACACACACACATTTTTATACTATTGGTTTTCAAGCACCAAAGGCATaGCACTCTTACCCCTTCCCA +
Preference number: 5 (lower is better)
Translates to: LSLTHTQNTHTHFYTIGFQAPKA*HSYPFP
Trigger: TGGGAAGGGGTAAGAGTGCAATGCCTTTGGTGCTTG...AAAACCAATAGTATAAAAATGTGTGTGTGTGTTCTGTGTGTGTGTGAGAGAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000480676.2
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CAA 90 bp GCACAGTTCTTCACAACCGATGGGGGAATAATTCAACATGGTGTCCAACAACGTAGCTATCAATCATGTTaGTTTGCACCAAATCCCAAG +
Preference number: 5 (lower is better)
Translates to: AQFFTTDGGIIQHGVQQRSYQSC*FAPNPK
Trigger: CTTGGGATTTGGTGCAAACAAACATGATTGATAGCT...ACGTTGTTGGACACCATGTTGAATTATTCCCCCATCGGTTGTGAAGAACTGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CAA 90 bp CAGCTATCAATCATGTTTGTTTGCACCAAATCCCAAGCCATTAAAATACGACTAGCAAGGTGTAAATGTTaGGCCCCAATCGGGCTTCAG +
Preference number: 5 (lower is better)
Translates to: QLSIMFVCTKSQAIKIRLARCKC*APIGLQ
Trigger: CTGAAGCCCGATTGGGGCCAAACATTTACACCTTGC...TAGTCGTATTTTAATGGCTTGGGATTTGGTGCAAACAAACATGATTGATAGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CAA 90 bp GACATAGTTCACTGGTTTATCATCTGGATCAGTATATACTGCGCAACGGGCAAGGGAGACTATGTTATGTaGTATTCAGCTGTTACGGAG +
Preference number: 5 (lower is better)
Translates to: DIVHWFIIWISIYCATGKGDYVM*YSAVTE
Trigger: CTCCGTAACAGCTGAATACAACATAACATAGTCTCC...CTTGCCCGTTGCGCAGTATATACTGATCCAGATGATAAACCAGTGAACTATGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS TCA 90 bp TCATTCAGGTCATTTTCTGCCTTATCCCAGTCTCCTTCCATGACATaGTTTCGGAATTTGGTAGCAGAAGGATGTTCTAAACGACATCCT +
Preference number: 5 (lower is better)
Translates to: SFRSFSALSQSPSMT*FRNLVAEGCSKRHP
Trigger: AGGATGTCGTTTAGAACATCCTTCTGCTACCAAATTCCGAAATCATGTCATGGAAGGAGACTGGGATAAGGCAGAAAATGACCTGAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000414423.9
ENST00000443112.6
ENST00000445239.1
ENST00000479778.1
ENST00000486652.5
ENST00000489825.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS TCA 90 bp AGCAGGGCCAAATGGTCAAATCTGCACACAAACCCTCCACCAGAGTaGTACGTTATTATACAAACTTTGACACTGTCAATTCACACAACT +
Preference number: 5 (lower is better)
Translates to: SRAKWSNLHTNPPPE*YVIIQTLTLSIHTT
Trigger: AGTTGTGTGAATTGACAGTGTCAAAGTTTGTATAATAACGTATCACTCTGGTGGAGGGTTTGTGTGCAGATTTGACCATTTGGCCCTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479778.1
CDS-3UTR CAA 90 bp CCAAGCTGCAAAGATCTCAAGCTAAATAAGGCGGAAAGATTTGGAGAAACAAAAAGATCAACAGTCTGGTaGAGCCCTAAGCCATTCAAG +
Preference number: 5 (lower is better)
Translates to: PSCKDLKLNKAERFGETKRSTVW*SPKPFK
Trigger: CTTGAATGGCTTAGGGCTCAACCAGACTGTTGATCT...TTTTGTTTCTCCAAATCTTTCCGCCTTATTTAGCTTGAGATCTTTGCAGCTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CAA 90 bp TTCACTGGTTTATCATCTGGATCAGTATATACTGCGCAACGGGCAAGGCTAGAATGTATCCGGATCAACTaGCCATATGATAACTGTTGT +
Preference number: 5 (lower is better)
Translates to: FTGLSSGSVYTAQRARLECIRIN*PYDNCC
Trigger: ACAACAGTTATCATATGGCAAGTTGATCCGGATACA...TTCTAGCCTTGCCCGTTGCGCAGTATATACTGATCCAGATGATAAACCAGTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CAA 90 bp TACACAGAAGAGCAACAAGAATGGTATCCTGCCAGACAAAAGACAGGAAGGAAAGAGACTGGCTCATTTTaGTCCTTAGTTCTCCTGTTT +
Preference number: 5 (lower is better)
Translates to: YTEEQQEWYPARQKTGRKETGSF*SLVLLF
Trigger: AAACAGGAGAACTAAGGACAAAAATGAGCCAGTCTC...TTTCCTTCCTGTCTTTTGTCTGGCAGGATACCATTCTTGTTGCTCTTCTGTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CAA 90 bp TTTCATGACGAGCATGTCTGTCCAGCTATCAATCATGTTTGTTTGCACCAAATCGATTCCAAGCCACACTaGTCAAACTGTCTTCATGAG +
Preference number: 5 (lower is better)
Translates to: FHDEHVCPAINHVCLHQIDSKPH*SNCLHE
Trigger: CTCATGAAGACAGTTTGACAAGTGTGGCTTGGAATC...GATTTGGTGCAAACAAACATGATTGATAGCTGGACAGACATGCTCGTCATGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CAA 90 bp AATGGAAGTAATGTGTTGGAGGGCAACCCAAAAGGACAGTTGCGAAATTATGAAGATTCCAAGCCACACTaGTCAAACTGTCTTCATGAG +
Preference number: 5 (lower is better)
Translates to: NGSNVLEGNPKGQLRNYEDSKPH*SNCLHE
Trigger: CTCATGAAGACAGTTTGACAAGTGTGGCTTGGAATC...TTCATAATTTCGCAACTGTCCTTTTGGGTTGCCCTCCAACACATTACTTCCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000480676.2
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CAA 90 bp TGTAGCACAGTTCTTCACAACCGATGGGGGAATAATTCAACATGGTGTCCAACAATCAATCATGTTTGTTaGCACCAAATCCCAAGCCAT +
Preference number: 5 (lower is better)
Translates to: CSTVLHNRWGNNSTWCPTINHVC*HQIPSH
Trigger: ATGGCTTGGGATTTGGTGCAAACAAACATGATTGAT...TGTTGGACACCATGTTGAATTATTCCCCCATCGGTTGTGAAGAACTGTGCTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CAA 90 bp GTTCACTGGTTTATCATCTGGATCAGTATATACTGCGCAACGGGCAAGGCTAGAATTACTCTGAATTTCTaGTGTAATGTCCTTCCAAGC +
Preference number: 5 (lower is better)
Translates to: VHWFIIWISIYCATGKARITLNF*CNVLPS
Trigger: GCTTGGAAGGACATTACACAAGAAATTCAGAGTAAT...TCTAGCCTTGCCCGTTGCGCAGTATATACTGATCCAGATGATAAACCAGTGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CAA 90 bp AAGGCTAGAATCCATGAACCAAGCTGCAAAGATCTCAAGCTAAATAAGGCGGAAGGAGACTATGTTATGTaGTATTCAGCTGTTACGGAG +
Preference number: 5 (lower is better)
Translates to: KARIHEPSCKDLKLNKAEGDYVM*YSAVTE
Trigger: CTCCGTAACAGCTGAATACAACATAACATAGTCTCC...TTCCGCCTTATTTAGCTTGAGATCTTTGCAGCTTGGTTCATGGATTCTAGCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CAA 90 bp GACTTGGCTACACCTAAAGGGGAACTTAGTACAAGACTTTTTCTTCACCAGAATCAAGCCCTCTTCTCTTaGTGGATTCTGGAGTCTATT +
Preference number: 5 (lower is better)
Translates to: DLATPKGELSTRLFLHQNQALFS*WILESI
Trigger: AATAGACTCCAGAATCCACAAAGAGAAGAGGGCTTG...ATTCTGGTGAAGAAAAAGTCTTGTACTAAGTTCCCCTTTAGGTGTAGCCAAGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CAA 90 bp CTCTCTCTCACACACACACAGAACACACACACACATTTTTATACTATTGGTTTTACCAAAGCTGAAGCTTaGTCATCCCTCCCCACTAAC +
Preference number: 5 (lower is better)
Translates to: LSLTHTQNTHTHFYTIGFTKAEA*SSLPTN
Trigger: GTTAGTGGGGAGGGATGACAAAGCTTCAGCTTTGGT...AAAACCAATAGTATAAAAATGTGTGTGTGTGTTCTGTGTGTGTGTGAGAGAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CAA 90 bp TCCTATCCAATGTATACTCTTCAGACTAATGCACTCTTTCTATCAAGCCTTCTAACCAAAGCTGAAGCTTaGTCATCCCTCCCCACTAAC +
Preference number: 5 (lower is better)
Translates to: SYPMYTLQTNALFLSSLLTKAEA*SSLPTN
Trigger: GTTAGTGGGGAGGGATGACAAAGCTTCAGCTTTGGT...TAGAAGGCTTGATAGAAAGAGTGCATTAGTCTGAAGAGTATACATTGGATAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CAA 90 bp CCAATGTATACTCTTCAGACTAATGCACTCTTTCTATCAAGCCTTCTAAACTGTACCAAAGCTGAAGCTTaGTCATCCCTCCCCACTAAC +
Preference number: 5 (lower is better)
Translates to: PMYTLQTNALFLSSLLNCTKAEA*SSLPTN
Trigger: GTTAGTGGGGAGGGATGACAAAGCTTCAGCTTTGGT...ACAGTTTAGAAGGCTTGATAGAAAGAGTGCATTAGTCTGAAGAGTATACATTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CAA 90 bp AAATATACCAGTATTAACCAAACCTTAAACTCAGAGGGCACTTCACATGTGCACAGGGTCAGTTCTTGTTaGCAGGAACCAACATCCATC +
Preference number: 5 (lower is better)
Translates to: KYTSINQTLNSEGTSHVHRVSSC*QEPTSI
Trigger: GATGGATGTTGGTTCCTGCAAACAAGAACTGACCCT...GTGCACATGTGAAGTGCCCTCTGAGTTTAAGGTTTGGTTAATACTGGTATATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480676.2
CDS-3UTR CAA 90 bp TGTATCGCTGATTCCTACTCTTTTGCTAGATCACACCAAAATTACTTCCTAAGTAGATCAACAGTCTGGTaGAGCCCTAAGCCATTCAAG +
Preference number: 5 (lower is better)
Translates to: CIADSYSFARSHQNYFLSRSTVW*SPKPFK
Trigger: CTTGAATGGCTTAGGGCTCAACCAGACTGTTGATCT...ACTTAGGAAGTAATTTTGGTGTGATCTAGCAAAAGAGTAGGAATCAGCGATACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CAA 90 bp TTGTTAGTATCTTGTGGCTGGCTTCATAGTATAAGACTCACTCTTAAGCCTACTTATTCCCAACAACGTTaGAGAGATTTCAAGTGCGCC +
Preference number: 5 (lower is better)
Translates to: LLVSCGWLHSIRLTLKPTYSQQR*RDFKCA
Trigger: GGCGCACTTGAAATCTCTCAAACGTTGTTGGGAATA...AGTAGGCTTAAGAGTGAGTCTTATACTATGAAGCCAGCCACAAGATACTAACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414423.9
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CAA 90 bp TCAGATATGGTTTCTGAAATGGAAGTAATGTGTTGGAGGGCAACCCAAAAGGACTGTATCCGGATCAACTaGCCATATGATAACTGTTGT +
Preference number: 5 (lower is better)
Translates to: SDMVSEMEVMCWRATQKDCIRIN*PYDNCC
Trigger: ACAACAGTTATCATATGGCAAGTTGATCCGGATACA...GTCCTTTTGGGTTGCCCTCCAACACATTACTTCCATTTCAGAAACCATATCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000480676.2
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CAA 90 bp ATGACGAGCATGTCTGTCCAGCTATCAATCATGTTTGTTTGCACCAAATCCCAATGTATCCGGATCAACTaGCCATATGATAACTGTTGT +
Preference number: 5 (lower is better)
Translates to: MTSMSVQLSIMFVCTKSQCIRIN*PYDNCC
Trigger: ACAACAGTTATCATATGGCAAGTTGATCCGGATACA...TTGGGATTTGGTGCAAACAAACATGATTGATAGCTGGACAGACATGCTCGTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CAA 90 bp AAATATACCAGTATTAACCAAACCTTAAACTCAGAGGGCACTTCACATGTGCACGATTCCAAGCCACACTaGTCAAACTGTCTTCATGAG +
Preference number: 5 (lower is better)
Translates to: KYTSINQTLNSEGTSHVHDSKPH*SNCLHE
Trigger: CTCATGAAGACAGTTTGACAAGTGTGGCTTGGAATC...GTGCACATGTGAAGTGCCCTCTGAGTTTAAGGTTTGGTTAATACTGGTATATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000480676.2
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CAA 90 bp GTGGATCTATTCCCCTCGCCACACACACACATTTTCAAGGAGCCAATAACATTTAATGAACTCCCTGAGTaGCTACATTTAACAAAGCTA +
Preference number: 5 (lower is better)
Translates to: VDLFPSPHTHIFKEPITFNELPE*LHLTKL
Trigger: TAGCTTTGTTAAATGTAGCAACTCAGGGAGTTCATT...AAATGTTATTGGCTCCTTGAAAATGTGTGTGTGTGGCGAGGGGAATAGATCCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000480676.2
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CAA 90 bp TATATTAAATCAGATATGGTTTCTGAAATGGAAGTAATGTGTTGGAGGGCAACCCTGTCAGCTCCGCAATaGGCAGTTCACTACGTTTGT +
Preference number: 5 (lower is better)
Translates to: YIKSDMVSEMEVMCWRATLSAPQ*AVHYVC
Trigger: ACAAACGTAGTGAACTGCCAATTGCGGAGCTGACAG...GGTTGCCCTCCAACACATTACTTCCATTTCAGAAACCATATCTGATTTAATATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000480676.2
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CAA 90 bp ATGATCTTCTTGTACTATGTTCCTATCTGTAAGGTCCTCGAAGTTATAGCCCCGATCAATCATGTTTGTTaGCACCAAATCCCAAGCCAT +
Preference number: 5 (lower is better)
Translates to: MIFLYYVPICKVLEVIAPINHVC*HQIPSH
Trigger: ATGGCTTGGGATTTGGTGCAAACAAACATGATTGAT...CGGGGCTATAACTTCGAGGACCTTACAGATAGGAACATAGTACAAGAAGATCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486652.5
CDS-3UTR CAA 90 bp AGCACTGTTTCTGACCATGTCTCATGTGGTATTCCAGAAGAGCATCAGTTATACATCAATCATGTTTGTTaGCACCAAATCCCAAGCCAT +
Preference number: 5 (lower is better)
Translates to: STVSDHVSCGIPEEHQLYINHVC*HQIPSH
Trigger: ATGGCTTGGGATTTGGTGCAAACAAACATGATTGAT...GTATAACTGATGCTCTTCTGGAATACCACATGAGACATGGTCAGAAACAGTGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CAA 90 bp AAGGCTAGAATCCATGAACCAAGCTGCAAAGATCTCAAGCTAAATAAGGCGGAAATCAATCATGTTTGTTaGCACCAAATCCCAAGCCAT +
Preference number: 5 (lower is better)
Translates to: KARIHEPSCKDLKLNKAEINHVC*HQIPSH
Trigger: ATGGCTTGGGATTTGGTGCAAACAAACATGATTGAT...TTCCGCCTTATTTAGCTTGAGATCTTTGCAGCTTGGTTCATGGATTCTAGCCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CAA 90 bp GTAAGCCTGAATGTAGCACAGTTCTTCACAACCGATGGGGGAATAATTCAACATATCAATCATGTTTGTTaGCACCAAATCCCAAGCCAT +
Preference number: 5 (lower is better)
Translates to: VSLNVAQFFTTDGGIIQHINHVC*HQIPSH
Trigger: ATGGCTTGGGATTTGGTGCAAACAAACATGATTGAT...ATGTTGAATTATTCCCCCATCGGTTGTGAAGAACTGTGCTACATTCAGGCTTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CAA 90 bp TCTGAAATGGAAGTAATGTGTTGGAGGGCAACCCAAAAGGACAGTTGCGAAATTAGCTATCAATCATGTTaGTTTGCACCAAATCCCAAG +
Preference number: 5 (lower is better)
Translates to: SEMEVMCWRATQKDSCEISYQSC*FAPNPK
Trigger: CTTGGGATTTGGTGCAAACAAACATGATTGATAGCT...AATTTCGCAACTGTCCTTTTGGGTTGCCCTCCAACACATTACTTCCATTTCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CAA 90 bp GTTACTATGAAGCAAGGTGTAAATGTTTGGCCCCAATCGGGCTTCAGAAATGGTATTACTCTGAATTTCTaGTGTAATGTCCTTCCAAGC +
Preference number: 5 (lower is better)
Translates to: VTMKQGVNVWPQSGFRNGITLNF*CNVLPS
Trigger: GCTTGGAAGGACATTACACAAGAAATTCAGAGTAAT...ACCATTTCTGAAGCCCGATTGGGGCCAAACATTTACACCTTGCTTCATAGTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CAA 90 bp TTCCAAAGTGGTTGTATCGCTGATTCCTACTCTTTTGCTAGATCACACCAAAATCACCAGAATCTTATTTaGGGGGTATCCCCATTCTCA +
Preference number: 5 (lower is better)
Translates to: FQSGCIADSYSFARSHQNHQNLI*GVSPFS
Trigger: TGAGAATGGGGATACCCCCAAAATAAGATTCTGGTG...ATTTTGGTGTGATCTAGCAAAAGAGTAGGAATCAGCGATACAACCACTTTGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CAA 90 bp CCAATGTATACTCTTCAGACTAATGCACTCTTTCTATCAAGCCTTCTAAACTGTAATCTGAGTGCCAAATaGCCCCTGAATGGGCACAAA +
Preference number: 5 (lower is better)
Translates to: PMYTLQTNALFLSSLLNCNLSAK*PLNGHK
Trigger: TTTGTGCCCATTCAGGGGCAATTTGGCACTCAGATT...ACAGTTTAGAAGGCTTGATAGAAAGAGTGCATTAGTCTGAAGAGTATACATTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CAA 90 bp TTTTTCATGACGAGCATGTCTGTCCAGCTATCAATCATGTTTGTTTGCACCAAAAGTACATACATGCTTTaGTGGATCTATTCCCCTCGC +
Preference number: 5 (lower is better)
Translates to: FFMTSMSVQLSIMFVCTKSTYML*WIYSPR
Trigger: GCGAGGGGAATAGATCCACAAAAGCATGTATGTACT...TTTGGTGCAAACAAACATGATTGATAGCTGGACAGACATGCTCGTCATGAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS CCA 90 bp GTGATACGTTATTATACAAACTTTGACACTGTCAATTCACACAACTaGAATGCAAGAATGGAAAATGGCCAGCACACAAATGGAGTTGGC +
Preference number: 5 (lower is better)
Translates to: VIRYYTNFDTVNSHN*NARMENGQHTNGVG
Trigger: GCCAACTCCATTTGTGTGCTGGCCATTTTCCATTCTTGCATTCCAGTTGTGTGAATTGACAGTGTCAAAGTTTGTATAATAACGTATCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479778.1
CDS-3UTR CAA 90 bp AAAATATATATACTGAGTTCAATGGGTAAGCCTGAATGTAGCACAGTTCTTCACCTTCCCATTCTGCTTTaGCACGTAGGTCTTCTGCAT +
Preference number: 5 (lower is better)
Translates to: KIYILSSMGKPECSTVLHLPILL*HVGLLH
Trigger: ATGCAGAAGACCTACGTGCAAAAGCAGAATGGGAAG...GTGAAGAACTGTGCTACATTCAGGCTTACCCATTGAACTCAGTATATATATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CAA 90 bp CCAAGCTGCAAAGATCTCAAGCTAAATAAGGCGGAAAGATTTGGAGAAACAAAAGAGACTGGCTCATTTTaGTCCTTAGTTCTCCTGTTT +
Preference number: 5 (lower is better)
Translates to: PSCKDLKLNKAERFGETKETGSF*SLVLLF
Trigger: AAACAGGAGAACTAAGGACAAAAATGAGCCAGTCTC...TTTTGTTTCTCCAAATCTTTCCGCCTTATTTAGCTTGAGATCTTTGCAGCTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CAA 90 bp TCAGATATGGTTTCTGAAATGGAAGTAATGTGTTGGAGGGCAACCCAAAAGGACAATGAACTCCCTGAGTaGCTACATTTAACAAAGCTA +
Preference number: 5 (lower is better)
Translates to: SDMVSEMEVMCWRATQKDNELPE*LHLTKL
Trigger: TAGCTTTGTTAAATGTAGCAACTCAGGGAGTTCATT...GTCCTTTTGGGTTGCCCTCCAACACATTACTTCCATTTCAGAAACCATATCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000480676.2
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CAA 90 bp TACACAGAAGAGCAACAAGAATGGTATCCTGCCAGACAAAAGACAGGAAGGAAAAATGAACTCCCTGAGTaGCTACATTTAACAAAGCTA +
Preference number: 5 (lower is better)
Translates to: YTEEQQEWYPARQKTGRKNELPE*LHLTKL
Trigger: TAGCTTTGTTAAATGTAGCAACTCAGGGAGTTCATT...TTTCCTTCCTGTCTTTTGTCTGGCAGGATACCATTCTTGTTGCTCTTCTGTGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CAA 90 bp GAACCAAGCTGCAAAGATCTCAAGCTAAATAAGGCGGAAAGATTTGGAGAAACAATCAATCATGTTTGTTaGCACCAAATCCCAAGCCAT +
Preference number: 5 (lower is better)
Translates to: EPSCKDLKLNKAERFGETINHVC*HQIPSH
Trigger: ATGGCTTGGGATTTGGTGCAAACAAACATGATTGAT...TGTTTCTCCAAATCTTTCCGCCTTATTTAGCTTGAGATCTTTGCAGCTTGGTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CAA 90 bp GACTTGGCTACACCTAAAGGGGAACTTAGTACAAGACTTTTTCTTCACCAGAATAGCTATCAATCATGTTaGTTTGCACCAAATCCCAAG +
Preference number: 5 (lower is better)
Translates to: DLATPKGELSTRLFLHQNSYQSC*FAPNPK
Trigger: CTTGGGATTTGGTGCAAACAAACATGATTGATAGCT...ATTCTGGTGAAGAAAAAGTCTTGTACTAAGTTCCCCTTTAGGTGTAGCCAAGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CAA 90 bp CCAAGCTGCAAAGATCTCAAGCTAAATAAGGCGGAAAGATTTGGAGAAACAAAAGGAGACTATGTTATGTaGTATTCAGCTGTTACGGAG +
Preference number: 5 (lower is better)
Translates to: PSCKDLKLNKAERFGETKGDYVM*YSAVTE
Trigger: CTCCGTAACAGCTGAATACAACATAACATAGTCTCC...TTTTGTTTCTCCAAATCTTTCCGCCTTATTTAGCTTGAGATCTTTGCAGCTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CAA 90 bp CCAATGTATACTCTTCAGACTAATGCACTCTTTCTATCAAGCCTTCTAAACTGTCACCAGAATCTTATTTaGGGGGTATCCCCATTCTCA +
Preference number: 5 (lower is better)
Translates to: PMYTLQTNALFLSSLLNCHQNLI*GVSPFS
Trigger: TGAGAATGGGGATACCCCCAAAATAAGATTCTGGTG...ACAGTTTAGAAGGCTTGATAGAAAGAGTGCATTAGTCTGAAGAGTATACATTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CAA 90 bp CAGCTATCAATCATGTTTGTTTGCACCAAATCCCAAGCCATTAAAATACGACTACAAGCCCTCTTCTCTTaGTGGATTCTGGAGTCTATT +
Preference number: 5 (lower is better)
Translates to: QLSIMFVCTKSQAIKIRLQALFS*WILESI
Trigger: AATAGACTCCAGAATCCACAAAGAGAAGAGGGCTTG...TAGTCGTATTTTAATGGCTTGGGATTTGGTGCAAACAAACATGATTGATAGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS TCA 90 bp CTGGCAATTTATGTGAATGTAGAAATGCAGCAACAAAGACTGGGCTaGATCTTAATCATTGGCAAATGGTGTGCATTATCCCCAAACAAT +
Preference number: 5 (lower is better)
Translates to: LAIYVNVEMQQQRLG*ILIIGKWCALSPNN
Trigger: ATTGTTTGGGGATAATGCACACCATTTGCCAATGATTAAGATTCAGCCCAGTCTTTGTTGCTGCATTTCTACATTCACATAAATTGCCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445239.1
CDS-3UTR CAA 90 bp TTTTTCATGACGAGCATGTCTGTCCAGCTATCAATCATGTTTGTTTGCACCAAATGTATCCGGATCAACTaGCCATATGATAACTGTTGT +
Preference number: 5 (lower is better)
Translates to: FFMTSMSVQLSIMFVCTKCIRIN*PYDNCC
Trigger: ACAACAGTTATCATATGGCAAGTTGATCCGGATACA...TTTGGTGCAAACAAACATGATTGATAGCTGGACAGACATGCTCGTCATGAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CAA 90 bp AATGGAAGTAATGTGTTGGAGGGCAACCCAAAAGGACAGTTGCGAAATTATGAAAATGAACTCCCTGAGTaGCTACATTTAACAAAGCTA +
Preference number: 5 (lower is better)
Translates to: NGSNVLEGNPKGQLRNYENELPE*LHLTKL
Trigger: TAGCTTTGTTAAATGTAGCAACTCAGGGAGTTCATT...TTCATAATTTCGCAACTGTCCTTTTGGGTTGCCCTCCAACACATTACTTCCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000480676.2
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CAA 90 bp GAACCAAGCTGCAAAGATCTCAAGCTAAATAAGGCGGAAAGATTTGGAGAAACAAATGAACTCCCTGAGTaGCTACATTTAACAAAGCTA +
Preference number: 5 (lower is better)
Translates to: EPSCKDLKLNKAERFGETNELPE*LHLTKL
Trigger: TAGCTTTGTTAAATGTAGCAACTCAGGGAGTTCATT...TGTTTCTCCAAATCTTTCCGCCTTATTTAGCTTGAGATCTTTGCAGCTTGGTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CAA 90 bp TCCAAATTCACCATCAACTATCCATGCTACTGCATTCCTCTTCAATATTCTGGTAGCTATCAATCATGTTaGTTTGCACCAAATCCCAAG +
Preference number: 5 (lower is better)
Translates to: SKFTINYPCYCIPLQYSGSYQSC*FAPNPK
Trigger: CTTGGGATTTGGTGCAAACAAACATGATTGATAGCT...ACCAGAATATTGAAGAGGAATGCAGTAGCATGGATAGTTGATGGTGAATTTGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486652.5
CDS-3UTR CAA 90 bp AAATATACCAGTATTAACCAAACCTTAAACTCAGAGGGCACTTCACATGTGCACAGCTATCAATCATGTTaGTTTGCACCAAATCCCAAG +
Preference number: 5 (lower is better)
Translates to: KYTSINQTLNSEGTSHVHSYQSC*FAPNPK
Trigger: CTTGGGATTTGGTGCAAACAAACATGATTGATAGCT...GTGCACATGTGAAGTGCCCTCTGAGTTTAAGGTTTGGTTAATACTGGTATATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CAA 90 bp GTTTCTGACCATGTCTCATGTGGTATTCCAGAAGAGCATCAGTTATACTGTGTAATTACTCTGAATTTCTaGTGTAATGTCCTTCCAAGC +
Preference number: 5 (lower is better)
Translates to: VSDHVSCGIPEEHQLYCVITLNF*CNVLPS
Trigger: GCTTGGAAGGACATTACACAAGAAATTCAGAGTAAT...TACACAGTATAACTGATGCTCTTCTGGAATACCACATGAGACATGGTCAGAAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CAA 90 bp CAGCTATCAATCATGTTTGTTTGCACCAAATCCCAAGCCATTAAAATACGACTAGGAGACTATGTTATGTaGTATTCAGCTGTTACGGAG +
Preference number: 5 (lower is better)
Translates to: QLSIMFVCTKSQAIKIRLGDYVM*YSAVTE
Trigger: CTCCGTAACAGCTGAATACAACATAACATAGTCTCC...TAGTCGTATTTTAATGGCTTGGGATTTGGTGCAAACAAACATGATTGATAGCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CAA 90 bp TATATTAAATCAGATATGGTTTCTGAAATGGAAGTAATGTGTTGGAGGGCAACCAGTACATACATGCTTTaGTGGATCTATTCCCCTCGC +
Preference number: 5 (lower is better)
Translates to: YIKSDMVSEMEVMCWRATSTYML*WIYSPR
Trigger: GCGAGGGGAATAGATCCACAAAAGCATGTATGTACT...GGTTGCCCTCCAACACATTACTTCCATTTCAGAAACCATATCTGATTTAATATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CAA 90 bp AATTTTAAGTTAAACAGAAGTCGTCTGCTCCAAATTCACCATCAACTATCCATGGAGACTGGCTCATTTTaGTCCTTAGTTCTCCTGTCA +
Preference number: 5 (lower is better)
Translates to: NFKLNRSRLLQIHHQLSMETGSF*SLVLLS
Trigger: TGACAGGAGAACTAAGGACAAAAATGAGCCAGTCTC...CATGGATAGTTGATGGTGAATTTGGAGCAGACGACTTCTGTTTAACTTAAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486652.5
CDS-3UTR CAA 90 bp AGCTGCAAAGATCTCAAGCTAAATAAGGCGGAAAGATTTGGAGAAACAAAAGAATGTATCCGGATCAACTaGCCATATGATAACTGTTGT +
Preference number: 5 (lower is better)
Translates to: SCKDLKLNKAERFGETKECIRIN*PYDNCC
Trigger: ACAACAGTTATCATATGGCAAGTTGATCCGGATACA...TTCTTTTGTTTCTCCAAATCTTTCCGCCTTATTTAGCTTGAGATCTTTGCAGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CAA 90 bp TATATTAAATCAGATATGGTTTCTGAAATGGAAGTAATGTGTTGGAGGGCAACCGAGACTGGCTCATTTTaGTCCTTAGTTCTCCTGTTT +
Preference number: 5 (lower is better)
Translates to: YIKSDMVSEMEVMCWRATETGSF*SLVLLF
Trigger: AAACAGGAGAACTAAGGACAAAAATGAGCCAGTCTC...GGTTGCCCTCCAACACATTACTTCCATTTCAGAAACCATATCTGATTTAATATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000480676.2
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CAA 90 bp CCAAGCTGCAAAGATCTCAAGCTAAATAAGGCGGAAAGATTTGGAGAAACAAAAAATGAACTCCCTGAGTaGCTACATTTAACAAAGCTA +
Preference number: 5 (lower is better)
Translates to: PSCKDLKLNKAERFGETKNELPE*LHLTKL
Trigger: TAGCTTTGTTAAATGTAGCAACTCAGGGAGTTCATT...TTTTGTTTCTCCAAATCTTTCCGCCTTATTTAGCTTGAGATCTTTGCAGCTTGG
38% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000486652.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS CCA 90 bp GAATGTAGAAATGCAGCAACAAAGACTGGGCTGAATCTTAATCATTaGCAAATGGTGTGCATTATCCCCAAACAATTATTTTCATGTATG +
Preference number: 5 (lower is better)
Translates to: ECRNAATKTGLNLNH*QMVCIIPKQLFSCM
Trigger: CATACATGAAAATAATTGTTTGGGGATAATGCACACCATTTGCCAATGATTAAGATTCAGCCCAGTCTTTGTTGCTGCATTTCTACATTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445239.1
CDS-3UTR CAA 90 bp TCCTATCCAATGTATACTCTTCAGACTAATGCACTCTTTCTATCAAGCCTTCTAATTACTCTGAATTTCTaGTGTAATGTCCTTCCAAGC +
Preference number: 5 (lower is better)
Translates to: SYPMYTLQTNALFLSSLLITLNF*CNVLPS
Trigger: GCTTGGAAGGACATTACACAAGAAATTCAGAGTAAT...TAGAAGGCTTGATAGAAAGAGTGCATTAGTCTGAAGAGTATACATTGGATAGGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678879.1
ENST00000678917.1
CDS-3UTR CAA 90 bp AAAATATATATACTGAGTTCAATGGGTAAGCCTGAATGTAGCACAGTTCTTCACAGTTTCAGAAAATGTTaGTGCCACAATAGCATGAGG +
Preference number: 5 (lower is better)
Translates to: KIYILSSMGKPECSTVLHSFRKC*CHNSMR
Trigger: CCTCATGCTATTGTGGCACAAACATTTTCTGAAACT...GTGAAGAACTGTGCTACATTCAGGCTTACCCATTGAACTCAGTATATATATTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486652.5
CDS CCA 72 bp CCATTGGCCTGCATGATGCTGCCGCTGACCAGGCTGTaGCCGCTACTTCGGTGGGGGACAGCAGCGGCGGCG +
Preference number: 6 (lower is better)
Translates to: PLACMMLPLTRL*PLLRWGTAAAA
Trigger: CGCCGCCGCTGCTGTCCCCCACCGAAGTAGCGGCCACAGCCTGGTCAGCGGCAGCATCATGCAGGCCAATGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000678307.1
ENST00000678555.1
ENST00000678917.1
CDS GCA 72 bp CCGCCACCTCCTCCTCCTCCTCCTGCCCCATTGGCCTaGATGATGCTGCCGCTGACCAGGCTGTGGCCGCTA +
Preference number: 6 (lower is better)
Translates to: PPPPPPPPAPLA*MMLPLTRLWPL
Trigger: TAGCGGCCACAGCCTGGTCAGCGGCAGCATCATGCAGGCCAATGGGGCAGGAGGAGGAGGAGGAGGTGGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414423.9
ENST00000678307.1
ENST00000678555.1
ENST00000678917.1
CDS TCA 72 bp AGGATGCGGCGGCCGCCCCGCCGGGAACCCCGTTATTaGCATTCAGGCTGTTGCTATTGTTGCTGGCGGCGG +
Preference number: 6 (lower is better)
Translates to: RMRRPPRREPRY*HSGCCYCCWRR
Trigger: CCGCCGCCAGCAACAATAGCAACAGCCTGAATGTCAATAACGGGGTTCCCGGCGGGGCGGCCGCCGCATCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000414423.9
ENST00000443112.6
ENST00000486652.5
ENST00000651911.2
ENST00000678307.1
ENST00000678555.1
ENST00000678917.1
CDS CAA 72 bp GAGGATGCGGCGGCCGCCCCGCCGGGAACCCCGTTATaGACATTCAGGCTGTTGCTATTGTTGCTGGCGGCG +
Preference number: 6 (lower is better)
Translates to: EDAAAAPPGTPL*TFRLLLLLLAA
Trigger: CGCCGCCAGCAACAATAGCAACAGCCTGAATGTCAATAACGGGGTTCCCGGCGGGGCGGCCGCCGCATCCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000414423.9
ENST00000443112.6
ENST00000486652.5
ENST00000651911.2
ENST00000678307.1
ENST00000678555.1
ENST00000678917.1
CDS CAA 72 bp CCGGGAACCCCGTTATTGACATTCAGGCTGTTGCTATaGTTGCTGGCGGCGGAGGGGGCGGAAGGCAGGAGC +
Preference number: 6 (lower is better)
Translates to: PGTPLLTFRLLL*LLAAEGAEGRS
Trigger: GCTCCTGCCTTCCGCCCCCTCCGCCGCCAGCAACAATAGCAACAGCCTGAATGTCAATAACGGGGTTCCCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000414423.9
ENST00000443112.6
ENST00000486652.5
ENST00000651911.2
ENST00000678307.1
ENST00000678555.1
ENST00000678917.1
CDS CCA 72 bp TGCTGTCCTATTAGCCTAATGACATCCTCATCTGACTaGGAGAGCCGCTTCTTCTTCTTGAGGCTGCTGCCC +
Preference number: 6 (lower is better)
Translates to: CCPISLMTSSSD*ESRFFFLRLLP
Trigger: GGGCAGCAGCCTCAAGAAGAAGAAGCGGCTCTCCCAGTCAGATGAGGATGTCATTAGGCTAATAGGACAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000414423.9
ENST00000443112.6
ENST00000477425.1
ENST00000479778.1
ENST00000486652.5
ENST00000489825.5
ENST00000651911.2
ENST00000678307.1
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS CAA 90 bp CAGGGACCTGTCTACTGTCCGCCAAATGTACTGGCTCATTTCTCCTaGAGAGTCTTTGACTACACTCTCCCGTCTTTTCTTCACCTGTCT +
Preference number: 6 (lower is better)
Translates to: QGPVYCPPNVLAHFS*RVFDYTLPSFLHLS
Trigger: AGACAGGTGAAGAAAAGACGGGAGAGTGTAGTCAAAGACTCTCAAGGAGAAATGAGCCAGTACATTTGGCGGACAGTAGACAGGTCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445239.1
CDS GCA 72 bp GTAGCAGAAGGATGTTCTAAACGACATCCTGACTCTTaGATGAGGAGATCAACAGTCTGGTTGAGCCCTAAG +
Preference number: 6 (lower is better)
Translates to: VAEGCSKRHPDS*MRRSTVWLSPK
Trigger: CTTAGGGCTCAACCAGACTGTTGATCTCCTCATGCAAGAGTCAGGATGTCGTTTAGAACATCCTTCTGCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000414423.9
ENST00000443112.6
ENST00000479778.1
ENST00000486652.5
ENST00000489825.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS GCA 72 bp CACTGTGAGGCAGAGGTGATAGGGTCAGTTCTTGTTTaGAGGAACCAACATCCATCAACTATCCATGCTACT +
Preference number: 6 (lower is better)
Translates to: HCEAEVIGSVLV*RNQHPSTIHAT
Trigger: AGTAGCATGGATAGTTGATGGATGTTGGTTCCTGCAAACAAGAACTGACCCTATCACCTCTGCCTCACAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480676.2
CDS GCA 72 bp AGATCAACAGTCTGGTTGAGCCCTAAGCCATTCAAGTaGTGTCCTATTAGCCTAATGACATCCTCATCTGAC +
Preference number: 6 (lower is better)
Translates to: RSTVWLSPKPFK*CPISLMTSSSD
Trigger: GTCAGATGAGGATGTCATTAGGCTAATAGGACAGCACTTGAATGGCTTAGGGCTCAACCAGACTGTTGATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000414423.9
ENST00000443112.6
ENST00000479778.1
ENST00000486652.5
ENST00000489825.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS GCA 72 bp CAGGTCATTTTCTGCTTGAGCCCTAAGCCATTCAAGTaGTGTCCTATTAGCCTAATGACATCCTCATCTGAC +
Preference number: 6 (lower is better)
Translates to: QVIFCLSPKPFK*CPISLMTSSSD
Trigger: GTCAGATGAGGATGTCATTAGGCTAATAGGACAGCACTTGAATGGCTTAGGGCTCAAGCAGAAAATGACCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477425.1
CDS GCA 72 bp TGCCTCCAAGATACATTGAGCCCTAAGCCATTCAAGTaGTGTCCTATTAGCCTAATGACATCCTCATCTGAC +
Preference number: 6 (lower is better)
Translates to: CLQDTLSPKPFK*CPISLMTSSSD
Trigger: GTCAGATGAGGATGTCATTAGGCTAATAGGACAGCACTTGAATGGCTTAGGGCTCAATGTATCTTGGAGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678307.1
CDS CAA 72 bp GTCTACTGTCCGCCAAATGTACTGGCTCATTTCTCCTaGAGAGTCTTTGACTACACTCTCCCGTCTTTTCTT +
Preference number: 6 (lower is better)
Translates to: VYCPPNVLAHFS*RVFDYTLPSFL
Trigger: AAGAAAAGACGGGAGAGTGTAGTCAAAGACTCTCAAGGAGAAATGAGCCAGTACATTTGGCGGACAGTAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445239.1
CDS GCA 72 bp AGGACCTTGCCATCCTCCAGGTATTCTAGGTACTTCTaGTGCAGCAGCAAAAACTTCATCCTCACAATTATT +
Preference number: 6 (lower is better)
Translates to: RTLPSSRYSRYF*CSSKNFILTII
Trigger: AATAATTGTGAGGATGAAGTTTTTGCTGCTGCAGCAGAAGTACCTAGAATACCTGGAGGATGGCAAGGTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000445239.1
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS TCA 72 bp TCTGGATTCCAAGCCACACTTGTCAAACTGTCTTCATaGGACTGGCTCATTTTTGTCCTTAGTTCTCCTGTT +
Preference number: 6 (lower is better)
Translates to: SGFQATLVKLSS*DWLIFVLSSPV
Trigger: AACAGGAGAACTAAGGACAAAAATGAGCCAGTCTCATGAAGACAGTTTGACAAGTGTGGCTTGGAATCCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000480676.2
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS TCA 72 bp CAGAAGGATGTTCTAAACGACATCCTGACTCTTGCATaGGGAGATCAACAGTCTGGCAATTTATGTGAATGT +
Preference number: 6 (lower is better)
Translates to: QKDVLNDILTLA*GDQQSGNLCEC
Trigger: ACATTCACATAAATTGCCAGACTGTTGATCTCCTCATGCAAGAGTCAGGATGTCGTTTAGAACATCCTTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445239.1
CDS CCA 72 bp ATTACAATGCTCCGTAAGTATCTGCTGCGTATAACATaGGAACTGCCTCCTACTACAAACATGGTCTATAAG +
Preference number: 6 (lower is better)
Translates to: ITMLRKYLLRIT*ELPPTTNMVYK
Trigger: CTTATAGACCATGTTTGTAGTAGGAGGCAGTTCCCATGTTATACGCAGCAGATACTTACGGAGCATTGTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS CAA 72 bp CACTTGTCAAACTGTCTTCATGAGACTGGCTCATTTTaGTCCTTAGTTCTCCTGTTTGTACATTCCAAAGCC +
Preference number: 6 (lower is better)
Translates to: HLSNCLHETGSF*SLVLLFVHSKA
Trigger: GGCTTTGGAATGTACAAACAGGAGAACTAAGGACAAAAATGAGCCAGTCTCATGAAGACAGTTTGACAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000414423.9
ENST00000480676.2
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS TCA 72 bp TCATTTTCTGCCTTATCCCAGTCTCCTTCCATGACATaGTTTCGGAATTTGGTAGCAGAAGGATGTTCTAAA +
Preference number: 6 (lower is better)
Translates to: SFSALSQSPSMT*FRNLVAEGCSK
Trigger: TTTAGAACATCCTTCTGCTACCAAATTCCGAAATCATGTCATGGAAGGAGACTGGGATAAGGCAGAAAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000414423.9
ENST00000443112.6
ENST00000445239.1
ENST00000479778.1
ENST00000486652.5
ENST00000489825.5
ENST00000651911.2
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS TCA 72 bp AATCAGCTAGAAGTTAAAAAGCCAGCAGCTAGCAGCTaGTTCTTCATGGTTTCCAAACTCCAGCATTTAGAA +
Preference number: 6 (lower is better)
Translates to: NQLEVKKPAASS*FFMVSKLQHLE
Trigger: TTCTAAATGCTGGAGTTTGGAAACCATGAAGAATCAGCTGCTAGCTGCTGGCTTTTTAACTTCTAGCTGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479778.1
CDS CAA 72 bp CAAAAACTTCATCCTCACAATTATTCCCAACAACGTTaGAGAGATTTCAAGTGCGCCTCTTACCACAATAGC +
Preference number: 6 (lower is better)
Translates to: QKLHPHNYSQQR*RDFKCASYHNS
Trigger: GCTATTGTGGTAAGAGGCGCACTTGAAATCTCTCAAACGTTGTTGGGAATAATTGTGAGGATGAAGTTTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000445239.1
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS TCA 72 bp AAAAACTTCATCCTCACAATTATTCCCAACAACGTTTaGGAGATTTCAAGTGCGCCTCTTACCACAATAGCA +
Preference number: 6 (lower is better)
Translates to: KNFILTIIPNNV*EISSAPLTTIA
Trigger: TGCTATTGTGGTAAGAGGCGCACTTGAAATCTCTCAAACGTTGTTGGGAATAATTGTGAGGATGAAGTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000414423.9
ENST00000445239.1
ENST00000678555.1
ENST00000678879.1
ENST00000678917.1
CDS CAA 72 bp CAAAAGTGTATTTACCACAATTATTCCCAACAACGTTaGAGAGATTTCAAGTGCGCCTCTTACCACAATAGC +
Preference number: 6 (lower is better)
Translates to: QKCIYHNYSQQR*RDFKCASYHNS
Trigger: GCTATTGTGGTAAGAGGCGCACTTGAAATCTCTCAAACGTTGTTGGGAATAATTGTGGTAAATACACTTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479778.1
CDS TCA 72 bp AAAAGTGTATTTACCACAATTATTCCCAACAACGTTTaGGAGATTTCAAGTGCGCCTCTTACCACAATAGCA +
Preference number: 6 (lower is better)
Translates to: KSVFTTIIPNNV*EISSAPLTTIA
Trigger: TGCTATTGTGGTAAGAGGCGCACTTGAAATCTCTCAAACGTTGTTGGGAATAATTGTGGTAAATACACTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479778.1
CDS TCA 72 bp AAATGGTCAAATCTGCACACAAACCCTCCACCAGAGTaGTACGTTATTATACAAACTTTGACACTGTCAATT +
Preference number: 6 (lower is better)
Translates to: KWSNLHTNPPPE*YVIIQTLTLSI
Trigger: AATTGACAGTGTCAAAGTTTGTATAATAACGTATCACTCTGGTGGAGGGTTTGTGTGCAGATTTGACCATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479778.1
CDS CCA 72 bp AATGCAGCAACAAAGACTGGGCTGAATCTTAATCATTaGCAAATGGTGTGCATTATCCCCAAACAATTATTT +
Preference number: 6 (lower is better)
Translates to: NAATKTGLNLNH*QMVCIIPKQLF
Trigger: AAATAATTGTTTGGGGATAATGCACACCATTTGCCAATGATTAAGATTCAGCCCAGTCTTTGTTGCTGCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445239.1
CDS CAA 72 bp CAAGTTCTTTATTGTCAACACACAAGTAGTGCTAACTaGCCCAATGGGAAAGCAACCTTAATTCTTCTTTTG +
Preference number: 6 (lower is better)
Translates to: QVLYCQHTSSAN*PNGKATLILLL
Trigger: CAAAAGAAGAATTAAGGTTGCTTTCCCATTGGGCAAGTTAGCACTACTTGTGTGTTGACAATAAAGAACTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479778.1
CDS TCA 72 bp ATTACAGAAAAGGAGAAAGTAATACATGACAGCATGTaGCAATTTGTGATAATACAGGGGCTTAGGTCATTA +
Preference number: 6 (lower is better)
Translates to: ITEKEKVIHDSM*QFVIIQGLRSL
Trigger: TAATGACCTAAGCCCCTGTATTATCACAAATTGTCACATGCTGTCATGTATTACTTTCTCCTTTTCTGTAAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479727.1