RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for WDR13 (Homo sapiens)

Ensembl gene IDs: ENSG00000101940

Ensembl transcript IDs: ENST00000218056.9, ENST00000376729.10, ENST00000466962.1, ENST00000470124.1, ENST00000472440.1, ENST00000479279.5, ENST00000482760.3, ENST00000486125.5, ENST00000492715.1, ENST00000492873.1, ENST00000495575.1, ENST00000498631.5

Found 593 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCGGCTACTGCGGACGATGCTGTTGCTATAGGCACGAGCACTGCCTaGCTCGGAGAGGGGCCCGTAGCGCTGGCCCAGCAGCTGCCCCCG +
Preference number: 1 (lower is better)
Translates to: AATADDAVAIGTSTA*LGEGPVALAQQLPP
Trigger: CGGGGGCAGCTGCTGGGCCAGCGCTACGGGCCCCTCTCCGAGCCAGGCAGTGCTCGTGCCTATAGCAACAGCATCGTCCGCAGTAGCCGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000486125.5
ENST00000498631.5
3UTR CCA 90 bp TGGCCCCGTAGCACGCGAAGCACTGTGGGTGGGGCAGGCACCAGCTaGCACAGGGAGATGCTGCCGTCGAGTGAGCAGCAGGCCAGGCGG +
Preference number: 1 (lower is better)
Translates to: WPRSTRSTVGGAGTS*HREMLPSSEQQARR
Trigger: CCGCCTGGCCTGCTGCTCACTCGACGGCAGCATCTCCCTGTGCCAGCTGGTGCCTGCCCCACCCACAGTGCTTCGCGTGCTACGGGGCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498631.5
3UTR TCA 90 bp GGGTGGGGCAGGCACCAGCTGGCACAGGGAGATGCTGCCGTCGAGTaGGCAGCAGGCCAGGCGGTGTCGGTCATCATTGGCGAAGCGCAC +
Preference number: 1 (lower is better)
Translates to: GWGRHQLAQGDAAVE*AAGQAVSVIIGEAH
Trigger: GTGCGCTTCGCCAATGATGACCGACACCGCCTGGCCTGCTGCTCACTCGACGGCAGCATCTCCCTGTGCCAGCTGGTGCCTGCCCCACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498631.5
3UTR CCA 90 bp AGTCGGAGACACCACGGGTGTGGCCCCGTAGCACGCGAAGCACTGTaGGTGGGGCAGGCACCAGCTGGCACAGGGAGATGCTGCCGTCGA +
Preference number: 1 (lower is better)
Translates to: SRRHHGCGPVAREAL*VGQAPAGTGRCCRR
Trigger: TCGACGGCAGCATCTCCCTGTGCCAGCTGGTGCCTGCCCCACCCACAGTGCTTCGCGTGCTACGGGGCCACACCCGTGGTGTCTCCGACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498631.5
3UTR TCA 90 bp AGACGGCACGGTTCATCTGCGCCTGCAGCTGGTAGGAGCCTCTGCTaGCAGAACGACGGTGCCCACGGGCCCCCAGGGCCCGAGGATCAT +
Preference number: 1 (lower is better)
Translates to: RRHGSSAPAAGRSLC*QNDGAHGPPGPEDH
Trigger: ATGATCCTCGGGCCCTGGGGGCCCGTGGGCACCGTCGTTCTGTCAGCAGAGGCTCCTACCAGCTGCAGGCGCAGATGAACCGTGCCGTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000486125.5
ENST00000498631.5
3UTR CCA 90 bp TGCCCGCAAAGGCATAGTTCTCGCTCAGTGACGTGTCCCCGGCCATaGCCCGACTTGCCTCTGCTGCTGACGTGGGCACCACGCTGCCAG +
Preference number: 1 (lower is better)
Translates to: CPQRHSSRSVTCPRP*PDLPLLLTWAPRCQ
Trigger: CTGGCAGCGTGGTGCCCACGTCAGCAGCAGAGGCAAGTCGGGCCATGGCCGGGGACACGTCACTGAGCGAGAACTATGCCTTTGCGGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486125.5
ENST00000498631.5
3UTR CCA 90 bp ATGTCATTGGAGAGGGACCAGGCGAAGTCGGAGACACCACGGGTGTaGCCCCGTAGCACGCGAAGCACTGTGGGTGGGGCAGGCACCAGC +
Preference number: 1 (lower is better)
Translates to: MSLERDQAKSETPRV*PRSTRSTVGGAGTS
Trigger: GCTGGTGCCTGCCCCACCCACAGTGCTTCGCGTGCTACGGGGCCACACCCGTGGTGTCTCCGACTTCGCCTGGTCCCTCTCCAATGACAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498631.5
3UTR CCA 90 bp CTGGAGCTGCCCGCTGCCCTCTGCCCTGTCCGTCCCCGGCAGAGCTaGGAGCCGGCCCTCAGCATGACCACCGAAACTTTATTTACAACA +
Preference number: 1 (lower is better)
Translates to: LELPAALCPVRPRQS*EPALSMTTETLFTT
Trigger: TGTTGTAAATAAAGTTTCGGTGGTCATGCTGAGGGCCGGCTCCCAGCTCTGCCGGGGACGGACAGGGCAGAGGGCAGCGGGCAGCTCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
3UTR CCA 90 bp TGCTGCCGTCGAGTGAGCAGCAGGCCAGGCGGTGTCGGTCATCATTaGCGAAGCGCACCCTTGGGACTGCCTCATCCACGTGCTGGTCAA +
Preference number: 1 (lower is better)
Translates to: CCRRVSSRPGGVGHH*RSAPLGLPHPRAGQ
Trigger: TTGACCAGCACGTGGATGAGGCAGTCCCAAGGGTGCGCTTCGCCAATGATGACCGACACCGCCTGGCCTGCTGCTCACTCGACGGCAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498631.5
3UTR CCA 90 bp AGATGCGCATGGTGGCATCCAGTGAGGTGGACACGAGGATGTCATTaGAGAGGGACCAGGCGAAGTCGGAGACACCACGGGTGTGGCCCC +
Preference number: 1 (lower is better)
Translates to: RCAWWHPVRWTRGCH*RGTRRSRRHHGCGP
Trigger: GGGGCCACACCCGTGGTGTCTCCGACTTCGCCTGGTCCCTCTCCAATGACATCCTCGTGTCCACCTCACTGGATGCCACCATGCGCATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498631.5
3UTR CCA 90 bp CATGAATGCACAAATGAGTCAATGAACCCCGTTCCACCGTGTTCCTaGAGCTGCCCGCTGCCCTCTGCCCTGTCCGTCCCCGGCAGAGCT +
Preference number: 1 (lower is better)
Translates to: HECTNESMNPVPPCS*SCPLPSALSVPGRA
Trigger: AGCTCTGCCGGGGACGGACAGGGCAGAGGGCAGCGGGCAGCTCCAGGAACACGGTGGAACGGGGTTCATTGACTCATTTGTGCATTCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376729.10
3UTR TCA 90 bp TCTGCCCTGTCCGTCCCCGGCAGAGCTGGGAGCCGGCCCTCAGCATaGCCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGAGGG +
Preference number: 1 (lower is better)
Translates to: SALSVPGRAGSRPSA*PPKLYLQHEAGVRG
Trigger: CCCTCTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCATGCTGAGGGCCGGCTCCCAGCTCTGCCGGGGACGGACAGGGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
3UTR CCA 90 bp CCCTCCAACAAGACTGTTGGTGCGAGTTCAGCAGCTCAGCAATGCTaGGCCAAGCTGGAGTCTCTACCACGCTGTGGACTGACCCTAAGG +
Preference number: 1 (lower is better)
Translates to: PSNKTVGASSAAQQC*AKLESLPRCGLTLR
Trigger: CCTTAGGGTCAGTCCACAGCGTGGTAGAGACTCCAGCTTGGCCCAGCATTGCTGAGCTGCTGAACTCGCACCAACAGTCTTGTTGGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376729.10
3UTR GCA 90 bp CCCTTGGGACTGCCTCATCCACGTGCTGGTCAAAAACATGATACATaGCCGCAAAGGCATAGTTCTCGCTCAGTGACGTGTCCCCGGCCA +
Preference number: 1 (lower is better)
Translates to: PLGLPHPRAGQKHDT*PQRHSSRSVTCPRP
Trigger: TGGCCGGGGACACGTCACTGAGCGAGAACTATGCCTTTGCGGGCATGTATCATGTTTTTGACCAGCACGTGGATGAGGCAGTCCCAAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498631.5
3UTR GCA 90 bp TTTCCCTCCAACAAGACTGTTGGTGCGAGTTCAGCAGCTCAGCAATaGTGGGCCAAGCTGGAGTCTCTACCACGCTGTGGACTGACCCTA +
Preference number: 1 (lower is better)
Translates to: FPSNKTVGASSAAQQ*WAKLESLPRCGLTL
Trigger: TAGGGTCAGTCCACAGCGTGGTAGAGACTCCAGCTTGGCCCAGCATTGCTGAGCTGCTGAACTCGCACCAACAGTCTTGTTGGAGGGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376729.10
3UTR GCA 90 bp CCCGTTGCTCCTGCACCAGCTTGGGGCTCCAGGACTCAACACCTCTaGTCCCTGCTTTTAATAAACAACACAATGCACAGAAGGGTTGGG +
Preference number: 1 (lower is better)
Translates to: PVAPAPAWGSRTQHL*SLLLINNTMHRRVG
Trigger: CCCAACCCTTCTGTGCATTGTGTTGTTTATTAAAAGCAGGGAGCAGAGGTGTTGAGTCCTGGAGCCCCAAGCTGGTGCAGGAGCAACGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376729.10
3UTR CCA 90 bp CCTAAGGTCCCAAGATGTCAGTCGCAGTTCCAGTCAACGCATATGTaGCAACAAATGGAGCTGAGAAGGAAGGGAGGGGCCGGAGCAAGA +
Preference number: 1 (lower is better)
Translates to: PKVPRCQSQFQSTHM*QQMELRRKGGAGAR
Trigger: TCTTGCTCCGGCCCCTCCCTTCCTTCTCAGCTCCATTTGTTGCCACATATGCGTTGACTGGAACTGCGACTGACATCTTGGGACCTTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376729.10
3UTR CCA 90 bp TGTGAACCGAGCACATCTTGTGTGACTCCAATGAGAGAGAAGCCCTaGAAACTTGTGCCTGGGTCTCTCTGGGAGTTGGTCCTGCACACC +
Preference number: 1 (lower is better)
Translates to: CEPSTSCVTPMREKP*KLVPGSLWELVLHT
Trigger: GGTGTGCAGGACCAACTCCCAGAGAGACCCAGGCACAAGTTTCCAGGGCTTCTCTCTCATTGGAGTCACACAAGATGTGCTCGGTTCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376729.10
3UTR CCA 90 bp GCCTCAACTGCGATCCTTGGAAAGGCCTGCTTCAAGGTTGGCCCTTaGGTGGTGTCTAAGAACATAGACTCCAGGAGGGTTCCCACCATT +
Preference number: 1 (lower is better)
Translates to: ASTAILGKACFKVGP*VVSKNIDSRRVPTI
Trigger: AATGGTGGGAACCCTCCTGGAGTCTATGTTCTTAGACACCACCCAAGGGCCAACCTTGAAGCAGGCCTTTCCAAGGATCGCAGTTGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376729.10
3UTR GCA 90 bp GAAGGCAGGCATTTCCATCAGTTTAGGTCAGAGCAGTATCCCCAGTaGCTAGAACAGTTCCTGGCACACGGTCAGGGCTCACTAATGTCT +
Preference number: 1 (lower is better)
Translates to: EGRHFHQFRSEQYPQ*LEQFLAHGQGSLMS
Trigger: AGACATTAGTGAGCCCTGACCGTGTGCCAGGAACTGTTCTAGGCACTGGGGATACTGCTCTGACCTAAACTGATGGAAATGCCTGCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376729.10
3UTR GCA 90 bp CTGCCATCCACAGACCTTGGTAGAAACTGGGCATCTGTGTGGTGTTaGACACTGTGCAGAAAAACAGTAACAGAGCAGGCCTCAACTGCG +
Preference number: 1 (lower is better)
Translates to: LPSTDLGRNWASVWC*TLCRKTVTEQASTA
Trigger: CGCAGTTGAGGCCTGCTCTGTTACTGTTTTTCTGCACAGTGTGCAACACCACACAGATGCCCAGTTTCTACCAAGGTCTGTGGATGGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376729.10
3UTR CCA 90 bp ACTGGACTGAACAAACGGGAGATTATTTCCCTCCAACAAGACTGTTaGTGCGAGTTCAGCAGCTCAGCAATGCTGGGCCAAGCTGGAGTC +
Preference number: 1 (lower is better)
Translates to: TGLNKREIISLQQDC*CEFSSSAMLGQAGV
Trigger: GACTCCAGCTTGGCCCAGCATTGCTGAGCTGCTGAACTCGCACCAACAGTCTTGTTGGAGGGAAATAATCTCCCGTTTGTTCAGTCCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376729.10
3UTR TCA 90 bp TTAATAAACAACACAATGCACAGAAGGGTTGGGAATATCGCCCCCTaGGGAGGCAGCAGAGTCCTGCAGCCTAACATAGTGAACCCCCTG +
Preference number: 1 (lower is better)
Translates to: LINNTMHRRVGNIAP*GGSRVLQPNIVNPL
Trigger: CAGGGGGTTCACTATGTTAGGCTGCAGGACTCTGCTGCCTCCTCAGGGGGCGATATTCCCAACCCTTCTGTGCATTGTGTTGTTTATTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000376729.10
3UTR CCA 90 bp ATTATCCTGCCATCCACAGACCTTGGTAGAAACTGGGCATCTGTGTaGTGTTGCACACTGTGCAGAAAAACAGTAACAGAGCAGGCCTCA +
Preference number: 1 (lower is better)
Translates to: IILPSTDLGRNWASV*CCTLCRKTVTEQAS
Trigger: TGAGGCCTGCTCTGTTACTGTTTTTCTGCACAGTGTGCAACACCACACAGATGCCCAGTTTCTACCAAGGTCTGTGGATGGCAGGATAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376729.10
3UTR TCA 90 bp TTTTGTTGTAATAAGTCAATCGTAGCCATGAATACAACCACATACTaGGTCTTGGGAGTCCTCCTAGCAAATCACTGGGCTTGGGGCTGG +
Preference number: 1 (lower is better)
Translates to: FCCNKSIVAMNTTTY*VLGVLLANHWAWGW
Trigger: CCAGCCCCAAGCCCAGTGATTTGCTAGGAGGACTCCCAAGACTCAGTATGTGGTTGTATTCATGGCTACGATTGACTTATTACAACAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376729.10
3UTR CCA 90 bp AGGTTCCTCAAAATTATCCTGCCATCCACAGACCTTGGTAGAAACTaGGCATCTGTGTGGTGTTGCACACTGTGCAGAAAAACAGTAACA +
Preference number: 1 (lower is better)
Translates to: RFLKIILPSTDLGRN*ASVWCCTLCRKTVT
Trigger: TGTTACTGTTTTTCTGCACAGTGTGCAACACCACACAGATGCCCAGTTTCTACCAAGGTCTGTGGATGGCAGGATAATTTTGAGGAACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376729.10
3UTR TCA 90 bp ATCATTAGCTGGCCTGTTCCATGTTTTTATCTACTGTCTCCGCTATaGTGCAAGCCCAATGAAGGCAGGCATTTCCATCAGTTTAGGTCA +
Preference number: 1 (lower is better)
Translates to: IISWPVPCFYLLSPL*CKPNEGRHFHQFRS
Trigger: TGACCTAAACTGATGGAAATGCCTGCCTTCATTGGGCTTGCATCATAGCGGAGACAGTAGATAAAAACATGGAACAGGCCAGCTAATGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376729.10
3UTR-3UTR GCA 90 bp TCAGTGACGTGTCCCCGGCCATGGCCCGACTTGCCTCTGCTGCTGACGTGGGCACTGACAGAACGACGGTaGCCACGGGCCCCCAGGGCC +
Preference number: 2 (lower is better)
Translates to: SVTCPRPWPDLPLLLTWALTERR*PRAPRA
Trigger: GGCCCTGGGGGCCCGTGGGCACCGTCGTTCTGTCAG...TGCCCACGTCAGCAGCAGAGGCAAGTCGGGCCATGGCCGGGGACACGTCACTGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000486125.5
ENST00000498631.5
3UTR-3UTR CCA 90 bp AGTGACGTGTCCCCGGCCATGGCCCGACTTGCCTCTGCTGCTGACGTGGGCACCGGCACGAGCACTGCCTaGCTCGGAGAGGGGCCCGTA +
Preference number: 2 (lower is better)
Translates to: SDVSPAMARLASAADVGTGTSTA*LGEGPV
Trigger: TACGGGCCCCTCTCCGAGCCAGGCAGTGCTCGTGCC...GGTGCCCACGTCAGCAGCAGAGGCAAGTCGGGCCATGGCCGGGGACACGTCACT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000486125.5
ENST00000498631.5
3UTR-3UTR TCA 90 bp GTGTCCCCGGCCATGGCCCGACTTGCCTCTGCTGCTGACGTGGGCACCACGCTGGGTAGGAGCCTCTGCTaGCAGAACGACGGTGCCCAC +
Preference number: 2 (lower is better)
Translates to: VSPAMARLASAADVGTTLGRSLC*QNDGAH
Trigger: GTGGGCACCGTCGTTCTGTCAGCAGAGGCTCCTACC...CAGCGTGGTGCCCACGTCAGCAGCAGAGGCAAGTCGGGCCATGGCCGGGGACAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486125.5
ENST00000498631.5
3UTR CAA 90 bp AGGCATAGTTCTCGCTCAGTGACGTGTCCCCGGCCATGGCCCGACTaGCCTCTGCTGCTGACGTGGGCACCACGCTGCCAGGGGGCCTGT +
Preference number: 2 (lower is better)
Translates to: RHSSRSVTCPRPWPD*PLLLTWAPRCQGAC
Trigger: ACAGGCCCCCTGGCAGCGTGGTGCCCACGTCAGCAGCAGAGGCAAGTCGGGCCATGGCCGGGGACACGTCACTGAGCGAGAACTATGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000486125.5
ENST00000498631.5
3UTR-3UTR TCA 90 bp CTGCTGCTGACGTGGGCACCACGCTGCCAGGGGGCCTGTCCTCATAGACGGCACGGTAGGAGCCTCTGCTaGCAGAACGACGGTGCCCAC +
Preference number: 2 (lower is better)
Translates to: LLLTWAPRCQGACPHRRHGRSLC*QNDGAH
Trigger: GTGGGCACCGTCGTTCTGTCAGCAGAGGCTCCTACC...GTGCCGTCTATGAGGACAGGCCCCCTGGCAGCGTGGTGCCCACGTCAGCAGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000486125.5
ENST00000498631.5
3UTR-3UTR TCA 90 bp AGGATGTCATTGGAGAGGGACCAGGCGAAGTCGGAGACACCACGGGTGTGGCCCGATGCTGCCGTCGAGTaGGCAGCAGGCCAGGCGGTG +
Preference number: 2 (lower is better)
Translates to: RMSLERDQAKSETPRVWPDAAVE*AAGQAV
Trigger: CACCGCCTGGCCTGCTGCTCACTCGACGGCAGCATC...GGGCCACACCCGTGGTGTCTCCGACTTCGCCTGGTCCCTCTCCAATGACATCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498631.5
3UTR-3UTR GCA 90 bp GCCCACGGGCCCCCAGGGCCCGAGGATCATCCTCAAAGTCCTCCATGCGGTCAATATAGGCACGAGCACTaGCTGGCTCGGAGAGGGGCC +
Preference number: 2 (lower is better)
Translates to: AHGPPGPEDHPQSPPCGQYRHEH*LARRGA
Trigger: GGCCCCTCTCCGAGCCAGGCAGTGCTCGTGCCTATA...TTGACCGCATGGAGGACTTTGAGGATGATCCTCGGGCCCTGGGGGCCCGTGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000486125.5
ENST00000498631.5
3UTR-3UTR GCA 90 bp GACTTGCCTCTGCTGCTGACGTGGGCACCACGCTGCCAGGGGGCCTGTCCTCATTATAGGCACGAGCACTaGCTGGCTCGGAGAGGGGCC +
Preference number: 2 (lower is better)
Translates to: DLPLLLTWAPRCQGACPHYRHEH*LARRGA
Trigger: GGCCCCTCTCCGAGCCAGGCAGTGCTCGTGCCTATA...ATGAGGACAGGCCCCCTGGCAGCGTGGTGCCCACGTCAGCAGCAGAGGCAAGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000486125.5
ENST00000498631.5
3UTR-3UTR GCA 90 bp GAGGATGTCATTGGAGAGGGACCAGGCGAAGTCGGAGACACCACGGGTGTGGCCACGTGGGCACCACGCTaGCAGGGGGCCTGTCCTCAT +
Preference number: 2 (lower is better)
Translates to: EDVIGEGPGEVGDTTGVATWAPR*QGACPH
Trigger: ATGAGGACAGGCCCCCTGGCAGCGTGGTGCCCACGT...GGCCACACCCGTGGTGTCTCCGACTTCGCCTGGTCCCTCTCCAATGACATCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498631.5
3UTR-3UTR CCA 90 bp GGTGTCGGTCATCATTGGCGAAGCGCACCCTTGGGACTGCCTCATCCACGTGCTCCTCTGCTGCTGACGTaGGCACCACGCTGCCAGGGG +
Preference number: 2 (lower is better)
Translates to: GVGHHWRSAPLGLPHPRAPLLLT*APRCQG
Trigger: CCCCTGGCAGCGTGGTGCCCACGTCAGCAGCAGAGG...AGCACGTGGATGAGGCAGTCCCAAGGGTGCGCTTCGCCAATGATGACCGACACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498631.5
3UTR CAA 90 bp ATGCTGCCGTCGAGTGAGCAGCAGGCCAGGCGGTGTCGGTCATCATaGGCGAAGCGCACCCTTGGGACTGCCTCATCCACGTGCTGGTCA +
Preference number: 2 (lower is better)
Translates to: MLPSSEQQARRCRSS*AKRTLGTASSTCWS
Trigger: TGACCAGCACGTGGATGAGGCAGTCCCAAGGGTGCGCTTCGCCAATGATGACCGACACCGCCTGGCCTGCTGCTCACTCGACGGCAGCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498631.5
3UTR CAA 90 bp CAGATGCGCATGGTGGCATCCAGTGAGGTGGACACGAGGATGTCATaGGAGAGGGACCAGGCGAAGTCGGAGACACCACGGGTGTGGCCC +
Preference number: 2 (lower is better)
Translates to: QMRMVASSEVDTRMS*ERDQAKSETPRVWP
Trigger: GGGCCACACCCGTGGTGTCTCCGACTTCGCCTGGTCCCTCTCCAATGACATCCTCGTGTCCACCTCACTGGATGCCACCATGCGCATCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498631.5
3UTR-3UTR GCA 90 bp GTGGACACGAGGATGTCATTGGAGAGGGACCAGGCGAAGTCGGAGACACCACGGGCTGGCACAGGGAGATaGTGCCGTCGAGTGAGCAGC +
Preference number: 2 (lower is better)
Translates to: VDTRMSLERDQAKSETPRAGTGR*CRRVSS
Trigger: GCTGCTCACTCGACGGCAGCATCTCCCTGTGCCAGC...CCGTGGTGTCTCCGACTTCGCCTGGTCCCTCTCCAATGACATCCTCGTGTCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498631.5
3UTR-3UTR CCA 90 bp CGCCAACTCCTCCACTGTCACTACCCTGGTGCAAGTCCCCATCACTGCGCTCAGGTTCCACCGTGTTCCTaGAGCTGCCCGCTGCCCTCT +
Preference number: 2 (lower is better)
Translates to: RQLLHCHYPGASPHHCAQVPPCS*SCPLPS
Trigger: AGAGGGCAGCGGGCAGCTCCAGGAACACGGTGGAAC...CTGAGCGCAGTGATGGGGACTTGCACCAGGGTAGTGACAGTGGAGGAGTTGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376729.10
3UTR-3UTR GCA 90 bp GTCGCAGTTCCAGTCAACGCATATGTGGCAACAAATGGAGCTGAGAAGGAAGGGCTGCCCGCTGCCCTCTaGCCTGTCCGTCCCCGGCAG +
Preference number: 2 (lower is better)
Translates to: VAVPVNAYVATNGAEKEGLPAAL*PVRPRQ
Trigger: CTGCCGGGGACGGACAGGGCAGAGGGCAGCGGGCAG...CCCTTCCTTCTCAGCTCCATTTGTTGCCACATATGCGTTGACTGGAACTGCGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376729.10
3UTR-3UTR CCA 90 bp GAGGATGTCATTGGAGAGGGACCAGGCGAAGTCGGAGACACCACGGGTGTGGCCGGTGTCGGTCATCATTaGCGAAGCGCACCCTTGGGA +
Preference number: 2 (lower is better)
Translates to: EDVIGEGPGEVGDTTGVAGVGHH*RSAPLG
Trigger: TCCCAAGGGTGCGCTTCGCCAATGATGACCGACACC...GGCCACACCCGTGGTGTCTCCGACTTCGCCTGGTCCCTCTCCAATGACATCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498631.5
3UTR-3UTR GCA 90 bp GACGGCACGGTTCATCTGCGCCTGCAGCTGGTAGGAGCCTCTGCTGACAGAACGGGCTACTGCGGACGATaGTGTTGCTATAGGCACGAG +
Preference number: 2 (lower is better)
Translates to: DGTVHLRLQLVGASADRTGYCGR*CCYRHE
Trigger: CTCGTGCCTATAGCAACAGCATCGTCCGCAGTAGCC...CGTTCTGTCAGCAGAGGCTCCTACCAGCTGCAGGCGCAGATGAACCGTGCCGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486125.5
ENST00000498631.5
3UTR-3UTR CCA 90 bp ATCTTGTGTGACTCCAATGAGAGAGAAGCCCTGGAAACTTGTGCCTGGGTCTCTCGTCCCCGGCAGAGCTaGGAGCCGGCCCTCAGCATG +
Preference number: 2 (lower is better)
Translates to: ILCDSNEREALETCAWVSRPRQS*EPALSM
Trigger: CATGCTGAGGGCCGGCTCCCAGCTCTGCCGGGGACG...AGAGACCCAGGCACAAGTTTCCAGGGCTTCTCTCTCATTGGAGTCACACAAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376729.10
3UTR-3UTR TCA 90 bp CACAGGGAGATGCTGCCGTCGAGTGAGCAGCAGGCCAGGCGGTGTCGGTCATCATGCTGGTCAAAAACATaGTACATGCCCGCAAAGGCA +
Preference number: 2 (lower is better)
Translates to: HREMLPSSEQQARRCRSSCWSKT*YMPAKA
Trigger: TGCCTTTGCGGGCATGTATCATGTTTTTGACCAGCA...TGATGACCGACACCGCCTGGCCTGCTGCTCACTCGACGGCAGCATCTCCCTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498631.5
3UTR-3UTR CCA 90 bp ATTAGCCGAGCTTGCTGGTGCGCGCCTGTAGTTCCAGCTATTCGGGAAGCTGAGATTACCCGAGTGTGGTaGCACACACCTGTAGTCCCA +
Preference number: 2 (lower is better)
Translates to: ISRACWCAPVVPAIREAEITRVW*HTPVVP
Trigger: TGGGACTACAGGTGTGTGCCACCACACTCGGGTAAT...CTCAGCTTCCCGAATAGCTGGAACTACAGGCGCGCACCAGCAAGCTCGGCTAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376729.10
3UTR-3UTR GCA 90 bp ATCTTGTGTGACTCCAATGAGAGAGAAGCCCTGGAAACTTGTGCCTGGGTCTCTGCAAGTCCCCATCACTaGGCTCAGAGGGGTCTCCTG +
Preference number: 2 (lower is better)
Translates to: ILCDSNEREALETCAWVSASPHH*AQRGLL
Trigger: CAGGAGACCCCTCTGAGCGCAGTGATGGGGACTTGC...AGAGACCCAGGCACAAGTTTCCAGGGCTTCTCTCTCATTGGAGTCACACAAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376729.10
3UTR-3UTR TCA 90 bp GATGCTGTCACCATAAAGAGCCCACTCCCCCAACTTCTGCAGCTCTGTCTCCCAGCACAAATGAGTCAATaGACCCCGTTCCACCGTGTT +
Preference number: 2 (lower is better)
Translates to: DAVTIKSPLPQLLQLCLPAQMSQ*TPFHRV
Trigger: AACACGGTGGAACGGGGTTCATTGACTCATTTGTGC...TGGGAGACAGAGCTGCAGAAGTTGGGGGAGTGGGCTCTTTATGGTGACAGCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376729.10
3UTR-3UTR TCA 90 bp ATCTTGTGTGACTCCAATGAGAGAGAAGCCCTGGAAACTTGTGCCTGGGTCTCTTGTTCCTCCTCTGCTTaGCACCTTCTGGTCACCCCC +
Preference number: 2 (lower is better)
Translates to: ILCDSNEREALETCAWVSCSSSA*HLLVTP
Trigger: GGGGGTGACCAGAAGGTGTCAAGCAGAGGAGGAACA...AGAGACCCAGGCACAAGTTTCCAGGGCTTCTCTCTCATTGGAGTCACACAAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376729.10
3UTR-3UTR GCA 90 bp AGGATGTCATTGGAGAGGGACCAGGCGAAGTCGGAGACACCACGGGTGTGGCCCCAAAAACATGATACATaGCCGCAAAGGCATAGTTCT +
Preference number: 2 (lower is better)
Translates to: RMSLERDQAKSETPRVWPQKHDT*PQRHSS
Trigger: AGAACTATGCCTTTGCGGGCATGTATCATGTTTTTG...GGGCCACACCCGTGGTGTCTCCGACTTCGCCTGGTCCCTCTCCAATGACATCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498631.5
3UTR-3UTR CCA 90 bp GATGCTGTCACCATAAAGAGCCCACTCCCCCAACTTCTGCAGCTCTGTCTCCCATTTACAACACGAGGCTaGAGTAAGAGGGGTGGGATG +
Preference number: 2 (lower is better)
Translates to: DAVTIKSPLPQLLQLCLPFTTRG*SKRGGM
Trigger: CATCCCACCCCTCTTACTCCAGCCTCGTGTTGTAAA...TGGGAGACAGAGCTGCAGAAGTTGGGGGAGTGGGCTCTTTATGGTGACAGCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376729.10
3UTR-3UTR TCA 90 bp ATCTTGTGTGACTCCAATGAGAGAGAAGCCCTGGAAACTTGTGCCTGGGTCTCTCTTGGGAGGCTTAAGTaGGGATCACTTGAGCCCTGG +
Preference number: 2 (lower is better)
Translates to: ILCDSNEREALETCAWVSLGRLK*GSLEPW
Trigger: CCAGGGCTCAAGTGATCCTCACTTAAGCCTCCCAAG...AGAGACCCAGGCACAAGTTTCCAGGGCTTCTCTCTCATTGGAGTCACACAAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376729.10
3UTR-3UTR GCA 90 bp TGGTGTTGCACACTGTGCAGAAAAACAGTAACAGAGCAGGCCTCAACTGCGATCCACTCCCCCAACTTCTaGAGCTCTGTCTCCCATCCT +
Preference number: 2 (lower is better)
Translates to: WCCTLCRKTVTEQASTAIHSPNF*SSVSHP
Trigger: AGGATGGGAGACAGAGCTGCAGAAGTTGGGGGAGTG...GATCGCAGTTGAGGCCTGCTCTGTTACTGTTTTTCTGCACAGTGTGCAACACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000376729.10
3UTR-3UTR CCA 90 bp ATCTTGTGTGACTCCAATGAGAGAGAAGCCCTGGAAACTTGTGCCTGGGTCTCTCCACTGTCACTACCCTaGTGCAAGTCCCCATCACTG +
Preference number: 2 (lower is better)
Translates to: ILCDSNEREALETCAWVSPLSLP*CKSPSL
Trigger: CAGTGATGGGGACTTGCACCAGGGTAGTGACAGTGG...AGAGACCCAGGCACAAGTTTCCAGGGCTTCTCTCTCATTGGAGTCACACAAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376729.10
3UTR-3UTR CCA 90 bp TGGTGTTGCACACTGTGCAGAAAAACAGTAACAGAGCAGGCCTCAACTGCGATCGTCTCTACCACGCTGTaGACTGACCCTAAGGTCCCA +
Preference number: 2 (lower is better)
Translates to: WCCTLCRKTVTEQASTAIVSTTL*TDPKVP
Trigger: TGGGACCTTAGGGTCAGTCCACAGCGTGGTAGAGAC...GATCGCAGTTGAGGCCTGCTCTGTTACTGTTTTTCTGCACAGTGTGCAACACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376729.10
3UTR-3UTR CCA 90 bp ATCTTGTGTGACTCCAATGAGAGAGAAGCCCTGGAAACTTGTGCCTGGGTCTCTAATGCTGGGCCAAGCTaGAGTCTCTACCACGCTGTG +
Preference number: 2 (lower is better)
Translates to: ILCDSNEREALETCAWVSNAGPS*SLYHAV
Trigger: CACAGCGTGGTAGAGACTCCAGCTTGGCCCAGCATT...AGAGACCCAGGCACAAGTTTCCAGGGCTTCTCTCTCATTGGAGTCACACAAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376729.10
3UTR CAA 90 bp AACTGGACTGAACAAACGGGAGATTATTTCCCTCCAACAAGACTGTaGGTGCGAGTTCAGCAGCTCAGCAATGCTGGGCCAAGCTGGAGT +
Preference number: 2 (lower is better)
Translates to: NWTEQTGDYFPPTRL*VRVQQLSNAGPSWS
Trigger: ACTCCAGCTTGGCCCAGCATTGCTGAGCTGCTGAACTCGCACCAACAGTCTTGTTGGAGGGAAATAATCTCCCGTTTGTTCAGTCCAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376729.10
3UTR CAA 90 bp AGTCTTGGGAGTCCTCCTAGCAAATCACTGGGCTTGGGGCTGGTATaGAGGACCATGACACACACACACATACATGACCTTTACCATGGG +
Preference number: 2 (lower is better)
Translates to: SLGSPPSKSLGLGLV*RTMTHTHIHDLYHG
Trigger: CCCATGGTAAAGGTCATGTATGTGTGTGTGTGTCATGGTCCTCAATACCAGCCCCAAGCCCAGTGATTTGCTAGGAGGACTCCCAAGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376729.10
3UTR-3UTR TCA 90 bp CTGGAAACTTGTGCCTGGGTCTCTCTGGGAGTTGGTCCTGCACACCATTTCTTTTCTCCCCCTACACTATaGCTCCCACTCACTTCATTC +
Preference number: 2 (lower is better)
Translates to: LETCAWVSLGVGPAHHFFSPPTL*LPLTSF
Trigger: GAATGAAGTGAGTGGGAGTCATAGTGTAGGGGGAGA...AAAGAAATGGTGTGCAGGACCAACTCCCAGAGAGACCCAGGCACAAGTTTCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376729.10
3UTR-3UTR GCA 90 bp ATTAGCCGAGCTTGCTGGTGCGCGCCTGTAGTTCCAGCTATTCGGGAAGCTGAGCCGTCGATGCATGAATaGACAAATGAGTCAATGAAC +
Preference number: 2 (lower is better)
Translates to: ISRACWCAPVVPAIREAEPSMHE*TNESMN
Trigger: GTTCATTGACTCATTTGTGCATTCATGCATCGACGG...CTCAGCTTCCCGAATAGCTGGAACTACAGGCGCGCACCAGCAAGCTCGGCTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376729.10
3UTR-3UTR GCA 90 bp GTCGCAGTTCCAGTCAACGCATATGTGGCAACAAATGGAGCTGAGAAGGAAGGGCTATGGTCATGCCACTaGATTCCAACCTGGGTGACA +
Preference number: 2 (lower is better)
Translates to: VAVPVNAYVATNGAEKEGLWSCH*IPTWVT
Trigger: TGTCACCCAGGTTGGAATGCAGTGGCATGACCATAG...CCCTTCCTTCTCAGCTCCATTTGTTGCCACATATGCGTTGACTGGAACTGCGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376729.10
3UTR-3UTR CCA 90 bp ATCTTGTGTGACTCCAATGAGAGAGAAGCCCTGGAAACTTGTGCCTGGGTCTCTGAGCTGTTCCAGGGCTaGAATTTGTACCCTGGATGG +
Preference number: 2 (lower is better)
Translates to: ILCDSNEREALETCAWVSELFQG*NLYPGW
Trigger: CCATCCAGGGTACAAATTCCAGCCCTGGAACAGCTC...AGAGACCCAGGCACAAGTTTCCAGGGCTTCTCTCTCATTGGAGTCACACAAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376729.10
3UTR-3UTR TCA 90 bp ATCTTGTGTGACTCCAATGAGAGAGAAGCCCTGGAAACTTGTGCCTGGGTCTCTAGCCGGCCCTCAGCATaGCCACCGAAACTTTATTTA +
Preference number: 2 (lower is better)
Translates to: ILCDSNEREALETCAWVSSRPSA*PPKLYL
Trigger: TAAATAAAGTTTCGGTGGTCATGCTGAGGGCCGGCT...AGAGACCCAGGCACAAGTTTCCAGGGCTTCTCTCTCATTGGAGTCACACAAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376729.10
3UTR-3UTR TCA 90 bp ATCTTGTGTGACTCCAATGAGAGAGAAGCCCTGGAAACTTGTGCCTGGGTCTCTCAGAGGGAGCCTCTATaGCCAAGTCAGATCATGTTC +
Preference number: 2 (lower is better)
Translates to: ILCDSNEREALETCAWVSQREPL*PSQIMF
Trigger: GAACATGATCTGACTTGGTCATAGAGGCTCCCTCTG...AGAGACCCAGGCACAAGTTTCCAGGGCTTCTCTCTCATTGGAGTCACACAAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376729.10
3UTR-3UTR GCA 90 bp TTTAATAAACAACACAATGCACAGAAGGGTTGGGAATATCGCCCCCTGAGGAGGGGCTGGCTTTCTCTCTaGCTGGAATGTTCTCCCCCT +
Preference number: 2 (lower is better)
Translates to: FNKQHNAQKGWEYRPLRRGWLSL*LECSPP
Trigger: AGGGGGAGAACATTCCAGGCAGAGAGAAAGCCAGCC...CCTCCTCAGGGGGCGATATTCCCAACCCTTCTGTGCATTGTGTTGTTTATTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000376729.10
3UTR-3UTR CCA 90 bp AAACTTGTGCCTGGGTCTCTCTGGGAGTTGGTCCTGCACACCATTTCTTTTTGCCTGCTTGACACCTTCTaGTCACCCCCACTCAGAAAA +
Preference number: 2 (lower is better)
Translates to: KLVPGSLWELVLHTISFCLLDTF*SPPLRK
Trigger: TTTTCTGAGTGGGGGTGACCAGAAGGTGTCAAGCAG...GCAAAAAGAAATGGTGTGCAGGACCAACTCCCAGAGAGACCCAGGCACAAGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000376729.10
3UTR-3UTR TCA 90 bp AAACTTGTGCCTGGGTCTCTCTGGGAGTTGGTCCTGCACACCATTTCTTTTTGCATGATGCAAGCCCAATaGAGGCAGGCATTTCCATCA +
Preference number: 2 (lower is better)
Translates to: KLVPGSLWELVLHTISFCMMQAQ*RQAFPS
Trigger: TGATGGAAATGCCTGCCTTCATTGGGCTTGCATCAT...GCAAAAAGAAATGGTGTGCAGGACCAACTCCCAGAGAGACCCAGGCACAAGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376729.10
3UTR-3UTR TCA 90 bp TGGTGTTGCACACTGTGCAGAAAAACAGTAACAGAGCAGGCCTCAACTGCGATCCACCACCATGTACCCTaGGGTCTATTAGATGGAAGT +
Preference number: 2 (lower is better)
Translates to: WCCTLCRKTVTEQASTAIHHHVP*GLLDGS
Trigger: ACTTCCATCTAATAGACCTCAGGGTACATGGTGGTG...GATCGCAGTTGAGGCCTGCTCTGTTACTGTTTTTCTGCACAGTGTGCAACACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376729.10
3UTR-3UTR GCA 90 bp ACAAACGGGAGATTATTTCCCTCCAACAAGACTGTTGGTGCGAGTTCAGCAGCTAGTGAGCTATGGTCATaGCACTGCATTCCAACCTGG +
Preference number: 2 (lower is better)
Translates to: TNGRLFPSNKTVGASSAASELWS*HCIPTW
Trigger: CCAGGTTGGAATGCAGTGGCATGACCATAGCTCACT...AGCTGCTGAACTCGCACCAACAGTCTTGTTGGAGGGAAATAATCTCCCGTTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376729.10
3UTR-3UTR CCA 90 bp ACAAACGGGAGATTATTTCCCTCCAACAAGACTGTTGGTGCGAGTTCAGCAGCTTCAGTGCCTTTAGGCTaGCTTTCTCTCTGCCTGGAA +
Preference number: 2 (lower is better)
Translates to: TNGRLFPSNKTVGASSAASVPLG*LSLCLE
Trigger: TTCCAGGCAGAGAGAAAGCCAGCCTAAAGGCACTGA...AGCTGCTGAACTCGCACCAACAGTCTTGTTGGAGGGAAATAATCTCCCGTTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376729.10
3UTR CAA 90 bp AGCGAAAAAGGAGGTTCCTCAAAATTATCCTGCCATCCACAGACCTaGGTAGAAACTGGGCATCTGTGTGGTGTTGCACACTGTGCAGAA +
Preference number: 2 (lower is better)
Translates to: SEKGGSSKLSCHPQT*VETGHLCGVAHCAE
Trigger: TTCTGCACAGTGTGCAACACCACACAGATGCCCAGTTTCTACCAAGGTCTGTGGATGGCAGGATAATTTTGAGGAACCTCCTTTTTCGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376729.10
3UTR-3UTR TCA 90 bp ATCTTGTGTGACTCCAATGAGAGAGAAGCCCTGGAAACTTGTGCCTGGGTCTCTCAGGCCACTGATAAGTaGTTTTGGTTATTTACCCCC +
Preference number: 2 (lower is better)
Translates to: ILCDSNEREALETCAWVSQATDK*FWLFTP
Trigger: GGGGGTAAATAACCAAAATCACTTATCAGTGGCCTG...AGAGACCCAGGCACAAGTTTCCAGGGCTTCTCTCTCATTGGAGTCACACAAGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376729.10
3UTR-3UTR TCA 90 bp TGGTGTTGCACACTGTGCAGAAAAACAGTAACAGAGCAGGCCTCAACTGCGATCTTTGACATTTTCTGGTaGCGCAGGCCACTGATAAGT +
Preference number: 2 (lower is better)
Translates to: WCCTLCRKTVTEQASTAIFDIFW*RRPLIS
Trigger: ACTTATCAGTGGCCTGCGTCACCAGAAAATGTCAAA...GATCGCAGTTGAGGCCTGCTCTGTTACTGTTTTTCTGCACAGTGTGCAACACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376729.10
3UTR-3UTR TCA 90 bp ATCTTGTGTGACTCCAATGAGAGAGAAGCCCTGGAAACTTGTGCCTGGGTCTCTTCAATGCTTGTGGAATaGATGAATCCGTCGATGCAT +
Preference number: 2 (lower is better)
Translates to: ILCDSNEREALETCAWVSSMLVE*MNPSMH
Trigger: ATGCATCGACGGATTCATTCATTCCACAAGCATTGA...AGAGACCCAGGCACAAGTTTCCAGGGCTTCTCTCTCATTGGAGTCACACAAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376729.10
3UTR TCA 72 bp CGTGTCCCCGGCCATGGCCCGACTTGCCTCTGCTGCTaGCGTGGGCACCACGCTGCCAGGGGGCCTGTCCTC +
Preference number: 3 (lower is better)
Translates to: RVPGHGPTCLCC*RGHHAARGPVL
Trigger: GAGGACAGGCCCCCTGGCAGCGTGGTGCCCACGTCAGCAGCAGAGGCAAGTCGGGCCATGGCCGGGGACACG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000486125.5
ENST00000498631.5
3UTR CCA 72 bp CACCACGGGTGTGGCCCCGTAGCACGCGAAGCACTGTaGGTGGGGCAGGCACCAGCTGGCACAGGGAGATGC +
Preference number: 3 (lower is better)
Translates to: HHGCGPVAREAL*VGQAPAGTGRC
Trigger: GCATCTCCCTGTGCCAGCTGGTGCCTGCCCCACCCACAGTGCTTCGCGTGCTACGGGGCCACACCCGTGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498631.5
3UTR CCA 72 bp CCCGCTGCCCTCTGCCCTGTCCGTCCCCGGCAGAGCTaGGAGCCGGCCCTCAGCATGACCACCGAAACTTTA +
Preference number: 3 (lower is better)
Translates to: PAALCPVRPRQS*EPALSMTTETL
Trigger: TAAAGTTTCGGTGGTCATGCTGAGGGCCGGCTCCCAGCTCTGCCGGGGACGGACAGGGCAGAGGGCAGCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
3UTR CCA 72 bp GCGGACGATGCTGTTGCTATAGGCACGAGCACTGCCTaGCTCGGAGAGGGGCCCGTAGCGCTGGCCCAGCAG +
Preference number: 3 (lower is better)
Translates to: ADDAVAIGTSTA*LGEGPVALAQQ
Trigger: CTGCTGGGCCAGCGCTACGGGCCCCTCTCCGAGCCAGGCAGTGCTCGTGCCTATAGCAACAGCATCGTCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486125.5
ENST00000498631.5
3UTR CCA 72 bp GAGAGGGACCAGGCGAAGTCGGAGACACCACGGGTGTaGCCCCGTAGCACGCGAAGCACTGTGGGTGGGGCA +
Preference number: 3 (lower is better)
Translates to: ERDQAKSETPRV*PRSTRSTVGGA
Trigger: TGCCCCACCCACAGTGCTTCGCGTGCTACGGGGCCACACCCGTGGTGTCTCCGACTTCGCCTGGTCCCTCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498631.5
3UTR-3UTR CAA 90 bp GAGGATGTCATTGGAGAGGGACCAGGCGAAGTCGGAGACACCACGGGTGTGGCCCGGCCATGGCCCGACTaGCCTCTGCTGCTGACGTGG +
Preference number: 3 (lower is better)
Translates to: EDVIGEGPGEVGDTTGVARPWPD*PLLLTW
Trigger: CCACGTCAGCAGCAGAGGCAAGTCGGGCCATGGCCG...GGCCACACCCGTGGTGTCTCCGACTTCGCCTGGTCCCTCTCCAATGACATCCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498631.5
3UTR TCA 72 bp AGGCACCAGCTGGCACAGGGAGATGCTGCCGTCGAGTaGGCAGCAGGCCAGGCGGTGTCGGTCATCATTGGC +
Preference number: 3 (lower is better)
Translates to: RHQLAQGDAAVE*AAGQAVSVIIG
Trigger: GCCAATGATGACCGACACCGCCTGGCCTGCTGCTCACTCGACGGCAGCATCTCCCTGTGCCAGCTGGTGCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498631.5
3UTR GCA 72 bp TACTGCGGACGATGCTGTTGCTATAGGCACGAGCACTaGCTGGCTCGGAGAGGGGCCCGTAGCGCTGGCCCA +
Preference number: 3 (lower is better)
Translates to: YCGRCCCYRHEH*LARRGARSAGP
Trigger: TGGGCCAGCGCTACGGGCCCCTCTCCGAGCCAGGCAGTGCTCGTGCCTATAGCAACAGCATCGTCCGCAGTA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486125.5
ENST00000498631.5
3UTR CCA 72 bp AGGCATAGTTCTCGCTCAGTGACGTGTCCCCGGCCATaGCCCGACTTGCCTCTGCTGCTGACGTGGGCACCA +
Preference number: 3 (lower is better)
Translates to: RHSSRSVTCPRP*PDLPLLLTWAP
Trigger: TGGTGCCCACGTCAGCAGCAGAGGCAAGTCGGGCCATGGCCGGGGACACGTCACTGAGCGAGAACTATGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486125.5
ENST00000498631.5
3UTR CCA 72 bp CGAGTGAGCAGCAGGCCAGGCGGTGTCGGTCATCATTaGCGAAGCGCACCCTTGGGACTGCCTCATCCACGT +
Preference number: 3 (lower is better)
Translates to: RVSSRPGGVGHH*RSAPLGLPHPR
Trigger: ACGTGGATGAGGCAGTCCCAAGGGTGCGCTTCGCCAATGATGACCGACACCGCCTGGCCTGCTGCTCACTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498631.5
3UTR GCA 72 bp GGAGGCCCCAGGTCAGCCTTAACTTCCCGTTGCTCCTaGACCAGCTTGGGGCTCCAGGACTCAACACCTCTG +
Preference number: 3 (lower is better)
Translates to: GGPRSALTSRCS*TSLGLQDSTPL
Trigger: CAGAGGTGTTGAGTCCTGGAGCCCCAAGCTGGTGCAGGAGCAACGGGAAGTTAAGGCTGACCTGGGGCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376729.10
3UTR CCA 72 bp TGGTGGCATCCAGTGAGGTGGACACGAGGATGTCATTaGAGAGGGACCAGGCGAAGTCGGAGACACCACGGG +
Preference number: 3 (lower is better)
Translates to: WWHPVRWTRGCH*RGTRRSRRHHG
Trigger: CCCGTGGTGTCTCCGACTTCGCCTGGTCCCTCTCCAATGACATCCTCGTGTCCACCTCACTGGATGCCACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498631.5
3UTR-3UTR CAA 90 bp ATGCGCATGGTGGCATCCAGTGAGGTGGACACGAGGATGTCATTGGAGAGGGACCGGTGTCGGTCATCATaGGCGAAGCGCACCCTTGGG +
Preference number: 3 (lower is better)
Translates to: MRMVASSEVDTRMSLERDRCRSS*AKRTLG
Trigger: CCCAAGGGTGCGCTTCGCCAATGATGACCGACACCG...GTCCCTCTCCAATGACATCCTCGTGTCCACCTCACTGGATGCCACCATGCGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498631.5
3UTR TCA 72 bp TCCGTCCCCGGCAGAGCTGGGAGCCGGCCCTCAGCATaGCCACCGAAACTTTATTTACAACACGAGGCTGGA +
Preference number: 3 (lower is better)
Translates to: SVPGRAGSRPSA*PPKLYLQHEAG
Trigger: TCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCATGCTGAGGGCCGGCTCCCAGCTCTGCCGGGGACGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
3UTR TCA 72 bp ATGATACATGCCCGCAAAGGCATAGTTCTCGCTCAGTaGCGTGTCCCCGGCCATGGCCCGACTTGCCTCTGC +
Preference number: 3 (lower is better)
Translates to: MIHARKGIVLAQ*RVPGHGPTCLC
Trigger: GCAGAGGCAAGTCGGGCCATGGCCGGGGACACGTCACTGAGCGAGAACTATGCCTTTGCGGGCATGTATCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498631.5
3UTR CCA 72 bp GCAATGCTGGGCCAAGCTGGAGTCTCTACCACGCTGTaGACTGACCCTAAGGTCCCAAGATGTCAGTCGCAG +
Preference number: 3 (lower is better)
Translates to: AMLGQAGVSTTL*TDPKVPRCQSQ
Trigger: CTGCGACTGACATCTTGGGACCTTAGGGTCAGTCCACAGCGTGGTAGAGACTCCAGCTTGGCCCAGCATTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376729.10
3UTR CCA 72 bp AAGACTGTTGGTGCGAGTTCAGCAGCTCAGCAATGCTaGGCCAAGCTGGAGTCTCTACCACGCTGTGGACTG +
Preference number: 3 (lower is better)
Translates to: KTVGASSAAQQC*AKLESLPRCGL
Trigger: CAGTCCACAGCGTGGTAGAGACTCCAGCTTGGCCCAGCATTGCTGAGCTGCTGAACTCGCACCAACAGTCTT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376729.10
3UTR GCA 72 bp AACAAGACTGTTGGTGCGAGTTCAGCAGCTCAGCAATaGTGGGCCAAGCTGGAGTCTCTACCACGCTGTGGA +
Preference number: 3 (lower is better)
Translates to: NKTVGASSAAQQ*WAKLESLPRCG
Trigger: TCCACAGCGTGGTAGAGACTCCAGCTTGGCCCAGCATTGCTGAGCTGCTGAACTCGCACCAACAGTCTTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376729.10
3UTR CCA 72 bp CCAAGATGTCAGTCGCAGTTCCAGTCAACGCATATGTaGCAACAAATGGAGCTGAGAAGGAAGGGAGGGGCC +
Preference number: 3 (lower is better)
Translates to: PRCQSQFQSTHM*QQMELRRKGGA
Trigger: GGCCCCTCCCTTCCTTCTCAGCTCCATTTGTTGCCACATATGCGTTGACTGGAACTGCGACTGACATCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376729.10
3UTR CCA 72 bp GACTCCAATGAGAGAGAAGCCCTGGAAACTTGTGCCTaGGTCTCTCTGGGAGTTGGTCCTGCACACCATTTC +
Preference number: 3 (lower is better)
Translates to: DSNEREALETCA*VSLGVGPAHHF
Trigger: GAAATGGTGTGCAGGACCAACTCCCAGAGAGACCCAGGCACAAGTTTCCAGGGCTTCTCTCTCATTGGAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376729.10
3UTR CCA 72 bp GCGATCCTTGGAAAGGCCTGCTTCAAGGTTGGCCCTTaGGTGGTGTCTAAGAACATAGACTCCAGGAGGGTT +
Preference number: 3 (lower is better)
Translates to: AILGKACFKVGP*VVSKNIDSRRV
Trigger: AACCCTCCTGGAGTCTATGTTCTTAGACACCACCCAAGGGCCAACCTTGAAGCAGGCCTTTCCAAGGATCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376729.10
3UTR GCA 72 bp CATTTCCATCAGTTTAGGTCAGAGCAGTATCCCCAGTaGCTAGAACAGTTCCTGGCACACGGTCAGGGCTCA +
Preference number: 3 (lower is better)
Translates to: HFHQFRSEQYPQ*LEQFLAHGQGS
Trigger: TGAGCCCTGACCGTGTGCCAGGAACTGTTCTAGGCACTGGGGATACTGCTCTGACCTAAACTGATGGAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376729.10
3UTR CCA 72 bp AGCACATCTTGTGTGACTCCAATGAGAGAGAAGCCCTaGAAACTTGTGCCTGGGTCTCTCTGGGAGTTGGTC +
Preference number: 3 (lower is better)
Translates to: STSCVTPMREKP*KLVPGSLWELV
Trigger: GACCAACTCCCAGAGAGACCCAGGCACAAGTTTCCAGGGCTTCTCTCTCATTGGAGTCACACAAGATGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376729.10
3UTR-3UTR CAA 90 bp AAAGGAGGTTCCTCAAAATTATCCTGCCATCCACAGACCTTGGTAGAAACTGGGCAATGCACAGAAGGGTaGGGAATATCGCCCCCTGAG +
Preference number: 3 (lower is better)
Translates to: KGGSSKLSCHPQTLVETGQCTEG*GISPPE
Trigger: CTCAGGGGGCGATATTCCCAACCCTTCTGTGCATTG...CCCAGTTTCTACCAAGGTCTGTGGATGGCAGGATAATTTTGAGGAACCTCCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376729.10
3UTR GCA 72 bp ACAGACCTTGGTAGAAACTGGGCATCTGTGTGGTGTTaGACACTGTGCAGAAAAACAGTAACAGAGCAGGCC +
Preference number: 3 (lower is better)
Translates to: TDLGRNWASVWC*TLCRKTVTEQA
Trigger: GGCCTGCTCTGTTACTGTTTTTCTGCACAGTGTGCAACACCACACAGATGCCCAGTTTCTACCAAGGTCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376729.10
3UTR CCA 72 bp AACAAACGGGAGATTATTTCCCTCCAACAAGACTGTTaGTGCGAGTTCAGCAGCTCAGCAATGCTGGGCCAA +
Preference number: 3 (lower is better)
Translates to: NKREIISLQQDC*CEFSSSAMLGQ
Trigger: TTGGCCCAGCATTGCTGAGCTGCTGAACTCGCACCAACAGTCTTGTTGGAGGGAAATAATCTCCCGTTTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376729.10
3UTR CCA 72 bp AGCCCTGGAAACTTGTGCCTGGGTCTCTCTGGGAGTTaGTCCTGCACACCATTTCTTTTTGCTGATTTTGCT +
Preference number: 3 (lower is better)
Translates to: SPGNLCLGLSGS*SCTPFLFADFA
Trigger: AGCAAAATCAGCAAAAAGAAATGGTGTGCAGGACCAACTCCCAGAGAGACCCAGGCACAAGTTTCCAGGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376729.10
3UTR TCA 72 bp TGGCCTGTTCCATGTTTTTATCTACTGTCTCCGCTATaGTGCAAGCCCAATGAAGGCAGGCATTTCCATCAG +
Preference number: 3 (lower is better)
Translates to: WPVPCFYLLSPL*CKPNEGRHFHQ
Trigger: CTGATGGAAATGCCTGCCTTCATTGGGCTTGCATCATAGCGGAGACAGTAGATAAAAACATGGAACAGGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376729.10
3UTR-3UTR CAA 90 bp AAAGGAGGTTCCTCAAAATTATCCTGCCATCCACAGACCTTGGTAGAAACTGGGCTGCTTCAGGTAACTTaGACATTTTCTGGTGACGCA +
Preference number: 3 (lower is better)
Translates to: KGGSSKLSCHPQTLVETGLLQVT*TFSGDA
Trigger: TGCGTCACCAGAAAATGTCAAAGTTACCTGAAGCAG...CCCAGTTTCTACCAAGGTCTGTGGATGGCAGGATAATTTTGAGGAACCTCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376729.10
3UTR-3UTR CAA 90 bp TGGTGTTGCACACTGTGCAGAAAAACAGTAACAGAGCAGGCCTCAACTGCGATCGCACACCATTTCTTTTaGCTGATTTTGCTCCATATC +
Preference number: 3 (lower is better)
Translates to: WCCTLCRKTVTEQASTAIAHHFF*LILLHI
Trigger: GATATGGAGCAAAATCAGCAAAAAGAAATGGTGTGC...GATCGCAGTTGAGGCCTGCTCTGTTACTGTTTTTCTGCACAGTGTGCAACACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376729.10
3UTR GCA 72 bp AGTGTTAGCGAAAAAGGAGGTTCCTCAAAATTATCCTaGCATCCACAGACCTTGGTAGAAACTGGGCATCTG +
Preference number: 3 (lower is better)
Translates to: SVSEKGGSSKLS*HPQTLVETGHL
Trigger: CAGATGCCCAGTTTCTACCAAGGTCTGTGGATGGCAGGATAATTTTGAGGAACCTCCTTTTTCGCTAACACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376729.10
3UTR CCA 72 bp AAAATTATCCTGCCATCCACAGACCTTGGTAGAAACTaGGCATCTGTGTGGTGTTGCACACTGTGCAGAAAA +
Preference number: 3 (lower is better)
Translates to: KIILPSTDLGRN*ASVWCCTLCRK
Trigger: TTTTCTGCACAGTGTGCAACACCACACAGATGCCCAGTTTCTACCAAGGTCTGTGGATGGCAGGATAATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376729.10
3UTR CCA 72 bp ATGCTTGGGGTGCAAGTAACCACACTGTCAAATAACTaGACTGAACAAACGGGAGATTATTTCCCTCCAACA +
Preference number: 3 (lower is better)
Translates to: MLGVQVTTLSNN*TEQTGDYFPPT
Trigger: TGTTGGAGGGAAATAATCTCCCGTTTGTTCAGTCCAGTTATTTGACAGTGTGGTTACTTGCACCCCAAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR TCA 90 bp GACTTGCCTCTGCTGCTGACGTGGGCACCACGCTGCCAGGGGGCCTGTCCTCATCCCCCGGAGCGGCCCTaGGACCACTGTCGCCGGTTC +
Preference number: 4 (lower is better)
Translates to: DLPLLLTWAPRCQGACPHPPERP*DHCRRF
Trigger: GAACCGGCGACAGTGGTCTCAGGGCCGCTCCGGGGG...ATGAGGACAGGCCCCCTGGCAGCGTGGTGCCCACGTCAGCAGCAGAGGCAAGTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000486125.5
ENST00000498631.5
CDS-3UTR TCA 90 bp TGTTGCTATAGGCACGAGCACTGCCTGGCTCGGAGAGGGGCCCGTAGCGCTGGCCCCCCGGAGCGGCCCTaGGACCACTGTCGCCGGTTC +
Preference number: 4 (lower is better)
Translates to: CCYRHEHCLARRGARSAGPPERP*DHCRRF
Trigger: GAACCGGCGACAGTGGTCTCAGGGCCGCTCCGGGGG...GCCAGCGCTACGGGCCCCTCTCCGAGCCAGGCAGTGCTCGTGCCTATAGCAACA
70% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000486125.5
ENST00000498631.5
CDS-3UTR GCA 90 bp CTGCTGCTGACGTGGGCACCACGCTGCCAGGGGGCCTGTCCTCATAGACGGCACCTGACAGAACGACGGTaGCCACGGGCCCCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: LLLTWAPRCQGACPHRRHLTERR*PRAPRA
Trigger: GGCCCTGGGGGCCCGTGGGCACCGTCGTTCTGTCAG...GTGCCGTCTATGAGGACAGGCCCCCTGGCAGCGTGGTGCCCACGTCAGCAGCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000486125.5
ENST00000498631.5
CDS-3UTR CCA 90 bp CACCACGCTGCCAGGGGGCCTGTCCTCATAGACGGCACGGTTCATCTGCGCCTGCTGCCGACGCAGCGCTaGGGGGTGCCCAGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: HHAARGPVLIDGTVHLRLLPTQR*GVPSLG
Trigger: GCCAAGGCTGGGCACCCCCCAGCGCTGCGTCGGCAG...CAGGCGCAGATGAACCGTGCCGTCTATGAGGACAGGCCCCCTGGCAGCGTGGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000486125.5
ENST00000498631.5
CDS-3UTR CCA 90 bp GTGTCCCCGGCCATGGCCCGACTTGCCTCTGCTGCTGACGTGGGCACCACGCTGCCTCTGCTGCTGACGTaGGCACCACGCTGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: VSPAMARLASAADVGTTLPLLLT*APRCQG
Trigger: CCCCTGGCAGCGTGGTGCCCACGTCAGCAGCAGAGG...CAGCGTGGTGCCCACGTCAGCAGCAGAGGCAAGTCGGGCCATGGCCGGGGACAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486125.5
ENST00000498631.5
CDS-3UTR CCA 90 bp GGAGCCTCTGCTGACAGAACGACGGTGCCCACGGGCCCCCAGGGCCCGAGGATCGAGACACCACGGGTGTaGCCCCGTAGCACGCGAAGC +
Preference number: 4 (lower is better)
Translates to: GASADRTTVPTGPQGPRIETPRV*PRSTRS
Trigger: GCTTCGCGTGCTACGGGGCCACACCCGTGGTGTCTC...GATCCTCGGGCCCTGGGGGCCCGTGGGCACCGTCGTTCTGTCAGCAGAGGCTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498631.5
CDS-3UTR TCA 90 bp CGGTGCCCACGGGCCCCCAGGGCCCGAGGATCATCCTCAAAGTCCTCCATGCGGTGGGCAGCGCCCGGGTaGCACACAGCGATTCAGAAC +
Preference number: 4 (lower is better)
Translates to: RCPRAPRARGSSSKSSMRWAAPG*HTAIQN
Trigger: GTTCTGAATCGCTGTGTGTCACCCGGGCGCTGCCCA...CCGCATGGAGGACTTTGAGGATGATCCTCGGGCCCTGGGGGCCCGTGGGCACCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486125.5
CDS-3UTR TCA 90 bp CACCACGCTGCCAGGGGGCCTGTCCTCATAGACGGCACGGTTCATCTGCGCCTGGATGCTGCCGTCGAGTaGGCAGCAGGCCAGGCGGTG +
Preference number: 4 (lower is better)
Translates to: HHAARGPVLIDGTVHLRLDAAVE*AAGQAV
Trigger: CACCGCCTGGCCTGCTGCTCACTCGACGGCAGCATC...CAGGCGCAGATGAACCGTGCCGTCTATGAGGACAGGCCCCCTGGCAGCGTGGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498631.5
CDS-3UTR GCA 90 bp CTGGTAGGAGCCTCTGCTGACAGAACGACGGTGCCCACGGGCCCCCAGGGCCCGCGCCGGCGGATATACTaGGTCCGAAACTCGCGTCCA +
Preference number: 4 (lower is better)
Translates to: LVGASADRTTVPTGPQGPRRRIY*VRNSRP
Trigger: TGGACGCGAGTTTCGGACGCAGTATATCCGCCGGCG...CGGGCCCTGGGGGCCCGTGGGCACCGTCGTTCTGTCAGCAGAGGCTCCTACCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000486125.5
ENST00000498631.5
CDS-3UTR CCA 90 bp AGTGACGTGTCCCCGGCCATGGCCCGACTTGCCTCTGCTGCTGACGTGGGCACCGGGGGTGCCCAGCCTTaGCATTCTCCCGCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: SDVSPAMARLASAADVGTGGAQP*HSPAAA
Trigger: AGCTGCTGCGGGAGAATGCCAAGGCTGGGCACCCCC...GGTGCCCACGTCAGCAGCAGAGGCAAGTCGGGCCATGGCCGGGGACACGTCACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000486125.5
ENST00000498631.5
CDS-3UTR CCA 90 bp GACGGCACGGTTCATCTGCGCCTGCAGCTGGTAGGAGCCTCTGCTGACAGAACGCTGCCGACGCAGCGCTaGGGGGTGCCCAGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: DGTVHLRLQLVGASADRTLPTQR*GVPSLG
Trigger: GCCAAGGCTGGGCACCCCCCAGCGCTGCGTCGGCAG...CGTTCTGTCAGCAGAGGCTCCTACCAGCTGCAGGCGCAGATGAACCGTGCCGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000486125.5
ENST00000498631.5
3UTR CAA 72 bp TCTCGCTCAGTGACGTGTCCCCGGCCATGGCCCGACTaGCCTCTGCTGCTGACGTGGGCACCACGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: SRSVTCPRPWPD*PLLLTWAPRCQ
Trigger: CTGGCAGCGTGGTGCCCACGTCAGCAGCAGAGGCAAGTCGGGCCATGGCCGGGGACACGTCACTGAGCGAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486125.5
ENST00000498631.5
CDS-3UTR GCA 90 bp AGTTCTCGCTCAGTGACGTGTCCCCGGCCATGGCCCGACTTGCCTCTGCTGCTGGACCACCTCCGGGGCTaGCTCCGGTTCTTGAGGCCC +
Preference number: 4 (lower is better)
Translates to: SSRSVTCPRPWPDLPLLLDHLRG*LRFLRP
Trigger: GGGCCTCAAGAACCGGAGGCAGCCCCGGAGGTGGTC...CAGCAGCAGAGGCAAGTCGGGCCATGGCCGGGGACACGTCACTGAGCGAGAACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486125.5
CDS-3UTR GCA 90 bp AGTTCTCGCTCAGTGACGTGTCCCCGGCCATGGCCCGACTTGCCTCTGCTGCTGCCCGCAGCAGCTGGCTaGGCCGGCGGATATACTGCG +
Preference number: 4 (lower is better)
Translates to: SSRSVTCPRPWPDLPLLLPAAAG*AGGYTA
Trigger: CGCAGTATATCCGCCGGCGCAGCCAGCTGCTGCGGG...CAGCAGCAGAGGCAAGTCGGGCCATGGCCGGGGACACGTCACTGAGCGAGAACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486125.5
ENST00000498631.5
CDS-3UTR GCA 90 bp CGATGCTGTTGCTATAGGCACGAGCACTGCCTGGCTCGGAGAGGGGCCCGTAGCCCCGCAGCAGCTGGCTaGGCCGGCGGATATACTGCG +
Preference number: 4 (lower is better)
Translates to: RCCCYRHEHCLARRGARSPAAAG*AGGYTA
Trigger: CGCAGTATATCCGCCGGCGCAGCCAGCTGCTGCGGG...GCTACGGGCCCCTCTCCGAGCCAGGCAGTGCTCGTGCCTATAGCAACAGCATCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000486125.5
ENST00000498631.5
CDS-3UTR GCA 90 bp GTTGCTATAGGCACGAGCACTGCCTGGCTCGGAGAGGGGCCCGTAGCGCTGGCCTATAGGCACGAGCACTaGCTGGCTCGGAGAGGGGCC +
Preference number: 4 (lower is better)
Translates to: VAIGTSTAWLGEGPVALAYRHEH*LARRGA
Trigger: GGCCCCTCTCCGAGCCAGGCAGTGCTCGTGCCTATA...GGCCAGCGCTACGGGCCCCTCTCCGAGCCAGGCAGTGCTCGTGCCTATAGCAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000486125.5
ENST00000498631.5
CDS-3UTR CCA 90 bp CACCACGCTGCCAGGGGGCCTGTCCTCATAGACGGCACGGTTCATCTGCGCCTGGCACGCGAAGCACTGTaGGTGGGGCAGGCACCAGCT +
Preference number: 4 (lower is better)
Translates to: HHAARGPVLIDGTVHLRLAREAL*VGQAPA
Trigger: AGCTGGTGCCTGCCCCACCCACAGTGCTTCGCGTGC...CAGGCGCAGATGAACCGTGCCGTCTATGAGGACAGGCCCCCTGGCAGCGTGGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498631.5
CDS-3UTR TCA 90 bp AGTTCTCGCTCAGTGACGTGTCCCCGGCCATGGCCCGACTTGCCTCTGCTGCTGACTTGCCTCTGCTGCTaGCGTGGGCACCACGCTGCC +
Preference number: 4 (lower is better)
Translates to: SSRSVTCPRPWPDLPLLLTCLCC*RGHHAA
Trigger: GGCAGCGTGGTGCCCACGTCAGCAGCAGAGGCAAGT...CAGCAGCAGAGGCAAGTCGGGCCATGGCCGGGGACACGTCACTGAGCGAGAACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486125.5
ENST00000498631.5
CDS-3UTR GCA 90 bp CGATGCTGTTGCTATAGGCACGAGCACTGCCTGGCTCGGAGAGGGGCCCGTAGCACGTGGGCACCACGCTaGCAGGGGGCCTGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: RCCCYRHEHCLARRGARSTWAPR*QGACPH
Trigger: ATGAGGACAGGCCCCCTGGCAGCGTGGTGCCCACGT...GCTACGGGCCCCTCTCCGAGCCAGGCAGTGCTCGTGCCTATAGCAACAGCATCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000486125.5
ENST00000498631.5
CDS-3UTR CCA 90 bp AGGCGGTGTCGGTCATCATTGGCGAAGCGCACCCTTGGGACTGCCTCATCCACGGGCACGAGCACTGCCTaGCTCGGAGAGGGGCCCGTA +
Preference number: 4 (lower is better)
Translates to: RRCRSSLAKRTLGTASSTGTSTA*LGEGPV
Trigger: TACGGGCCCCTCTCCGAGCCAGGCAGTGCTCGTGCC...CGTGGATGAGGCAGTCCCAAGGGTGCGCTTCGCCAATGATGACCGACACCGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498631.5
CDS-3UTR CCA 90 bp CCGCAAAGGCATAGTTCTCGCTCAGTGACGTGTCCCCGGCCATGGCCCGACTTGCCTCTGCTGCTGACGTaGGCACCACGCTGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: PQRHSSRSVTCPRPWPDLPLLLT*APRCQG
Trigger: CCCCTGGCAGCGTGGTGCCCACGTCAGCAGCAGAGG...CAAGTCGGGCCATGGCCGGGGACACGTCACTGAGCGAGAACTATGCCTTTGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486125.5
ENST00000498631.5
CDS-3UTR CCA 90 bp CACGCTGCCAGGGGGCCTGTCCTCATAGACGGCACGGTTCATCTGCGCCTGCAGGGCGAAGCGCACCCTTaGGACTGCCTCATCCACGTG +
Preference number: 4 (lower is better)
Translates to: HAARGPVLIDGTVHLRLQGEAHP*DCLIHV
Trigger: CACGTGGATGAGGCAGTCCCAAGGGTGCGCTTCGCC...CTGCAGGCGCAGATGAACCGTGCCGTCTATGAGGACAGGCCCCCTGGCAGCGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498631.5
CDS-3UTR CCA 90 bp GGCACCAGCTGGCACAGGGAGATGCTGCCGTCGAGTGAGCAGCAGGCCAGGCGGCCCAGATGCGCATGGTaGCATCCAGTGAGGTGGACA +
Preference number: 4 (lower is better)
Translates to: GTSWHREMLPSSEQQARRPRCAW*HPVRWT
Trigger: TGTCCACCTCACTGGATGCCACCATGCGCATCTGGG...CCGCCTGGCCTGCTGCTCACTCGACGGCAGCATCTCCCTGTGCCAGCTGGTGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498631.5
CDS-3UTR TCA 90 bp CGATGCTGTTGCTATAGGCACGAGCACTGCCTGGCTCGGAGAGGGGCCCGTAGCGGTAGGAGCCTCTGCTaGCAGAACGACGGTGCCCAC +
Preference number: 4 (lower is better)
Translates to: RCCCYRHEHCLARRGARSGRSLC*QNDGAH
Trigger: GTGGGCACCGTCGTTCTGTCAGCAGAGGCTCCTACC...GCTACGGGCCCCTCTCCGAGCCAGGCAGTGCTCGTGCCTATAGCAACAGCATCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486125.5
ENST00000498631.5
CDS-3UTR TCA 90 bp GCGGACGATGCTGTTGCTATAGGCACGAGCACTGCCTGGCTCGGAGAGGGGCCCATAGTTCTCGCTCAGTaGCGTGTCCCCGGCCATGGC +
Preference number: 4 (lower is better)
Translates to: ADDAVAIGTSTAWLGEGPIVLAQ*RVPGHG
Trigger: GCCATGGCCGGGGACACGTCACTGAGCGAGAACTAT...GGGCCCCTCTCCGAGCCAGGCAGTGCTCGTGCCTATAGCAACAGCATCGTCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000486125.5
ENST00000498631.5
CDS-3UTR GCA 90 bp AGATGCTGCCGTCGAGTGAGCAGCAGGCCAGGCGGTGTCGGTCATCATTGGCGAACGTGGGCACCACGCTaGCAGGGGGCCTGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: RCCRRVSSRPGGVGHHWRTWAPR*QGACPH
Trigger: ATGAGGACAGGCCCCCTGGCAGCGTGGTGCCCACGT...TCGCCAATGATGACCGACACCGCCTGGCCTGCTGCTCACTCGACGGCAGCATCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498631.5
CDS-3UTR CCA 90 bp CACGGGCCCCCAGGGCCCGAGGATCATCCTCAAAGTCCTCCATGCGGTCAAGAGCCCCGGGTGTTACCATaGTCATCACCCCAGCCCTGC +
Preference number: 4 (lower is better)
Translates to: HGPPGPEDHPQSPPCGQEPRVLP*SSPQPC
Trigger: GCAGGGCTGGGGTGATGACCATGGTAACACCCGGGG...CTCTTGACCGCATGGAGGACTTTGAGGATGATCCTCGGGCCCTGGGGGCCCGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000486125.5
CDS-3UTR CCA 90 bp GAGGATGTCATTGGAGAGGGACCAGGCGAAGTCGGAGACACCACGGGTGTGGCCGGGGGTGCCCAGCCTTaGCATTCTCCCGCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: EDVIGEGPGEVGDTTGVAGGAQP*HSPAAA
Trigger: AGCTGCTGCGGGAGAATGCCAAGGCTGGGCACCCCC...GGCCACACCCGTGGTGTCTCCGACTTCGCCTGGTCCCTCTCCAATGACATCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498631.5
CDS-3UTR CCA 90 bp TGTCATTGGAGAGGGACCAGGCGAAGTCGGAGACACCACGGGTGTGGCCCCGTAACGTGTCCCCGGCCATaGCCCGACTTGCCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: CHWRGTRRSRRHHGCGPVTCPRP*PDLPLL
Trigger: CAGCAGAGGCAAGTCGGGCCATGGCCGGGGACACGT...TACGGGGCCACACCCGTGGTGTCTCCGACTTCGCCTGGTCCCTCTCCAATGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498631.5
3UTR CAA 72 bp TCGAGTGAGCAGCAGGCCAGGCGGTGTCGGTCATCATaGGCGAAGCGCACCCTTGGGACTGCCTCATCCACG +
Preference number: 4 (lower is better)
Translates to: SSEQQARRCRSS*AKRTLGTASST
Trigger: CGTGGATGAGGCAGTCCCAAGGGTGCGCTTCGCCAATGATGACCGACACCGCCTGGCCTGCTGCTCACTCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498631.5
CDS-3UTR TCA 90 bp GCCCACGGGCCCCCAGGGCCCGAGGATCATCCTCAAAGTCCTCCATGCGGTCAACATGGTGGCATCCAGTaGGGTGGACACGAGGATGTC +
Preference number: 4 (lower is better)
Translates to: AHGPPGPEDHPQSPPCGQHGGIQ*GGHEDV
Trigger: GACATCCTCGTGTCCACCTCACTGGATGCCACCATG...TTGACCGCATGGAGGACTTTGAGGATGATCCTCGGGCCCTGGGGGCCCGTGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498631.5
CDS-3UTR GCA 90 bp CTGCTGACAGAACGACGGTGCCCACGGGCCCCCAGGGCCCGAGGATCATCCTCATCCACTGCTAAGACTTaGTGCCACACCGCGGCCATT +
Preference number: 4 (lower is better)
Translates to: LLTERRCPRAPRARGSSSSTAKT*CHTAAI
Trigger: AATGGCCGCGGTGTGGCAGCAAGTCTTAGCAGTGGA...TGAGGATGATCCTCGGGCCCTGGGGGCCCGTGGGCACCGTCGTTCTGTCAGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000486125.5
ENST00000498631.5
CDS-3UTR GCA 90 bp CCGCAAAGGCATAGTTCTCGCTCAGTGACGTGTCCCCGGCCATGGCCCGACTTGTATAGGCACGAGCACTaGCTGGCTCGGAGAGGGGCC +
Preference number: 4 (lower is better)
Translates to: PQRHSSRSVTCPRPWPDLYRHEH*LARRGA
Trigger: GGCCCCTCTCCGAGCCAGGCAGTGCTCGTGCCTATA...CAAGTCGGGCCATGGCCGGGGACACGTCACTGAGCGAGAACTATGCCTTTGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000486125.5
ENST00000498631.5
CDS-3UTR GCA 90 bp CCGCAAAGGCATAGTTCTCGCTCAGTGACGTGTCCCCGGCCATGGCCCGACTTGGGCACAGGGAGATGCTaGCGTCGAGTGAGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: PQRHSSRSVTCPRPWPDLGTGRC*RRVSSR
Trigger: CCTGCTGCTCACTCGACGGCAGCATCTCCCTGTGCC...CAAGTCGGGCCATGGCCGGGGACACGTCACTGAGCGAGAACTATGCCTTTGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498631.5
CDS-3UTR GCA 90 bp CTCCATGCGGTCAAGAGTAGTGCGGCTACTGCGGACGATGCTGTTGCTATAGGCGGCAGCCTCCGGGGCTaGCTCCGGTTCTTGAGGCCC +
Preference number: 4 (lower is better)
Translates to: LHAVKSSAATADDAVAIGGSLRG*LRFLRP
Trigger: GGGCCTCAAGAACCGGAGGCAGCCCCGGAGGCTGCC...GCCTATAGCAACAGCATCGTCCGCAGTAGCCGCACTACTCTTGACCGCATGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498631.5
CDS-3UTR CCA 90 bp AGGATGTCATTGGAGAGGGACCAGGCGAAGTCGGAGACACCACGGGTGTGGCCCTTCTCCCGCAGCAGCTaGCTGCGCCGGCGGATATAC +
Preference number: 4 (lower is better)
Translates to: RMSLERDQAKSETPRVWPFSRSS*LRRRIY
Trigger: GTATATCCGCCGGCGCAGCCAGCTGCTGCGGGAGAA...GGGCCACACCCGTGGTGTCTCCGACTTCGCCTGGTCCCTCTCCAATGACATCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498631.5
CDS-3UTR TCA 90 bp GCCTGTCCTCATAGACGGCACGGTTCATCTGCGCCTGCAGCTGGTAGGAGCCTCATAGTTCTCGCTCAGTaGCGTGTCCCCGGCCATGGC +
Preference number: 4 (lower is better)
Translates to: ACPHRRHGSSAPAAGRSLIVLAQ*RVPGHG
Trigger: GCCATGGCCGGGGACACGTCACTGAGCGAGAACTAT...GAGGCTCCTACCAGCTGCAGGCGCAGATGAACCGTGCCGTCTATGAGGACAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486125.5
ENST00000498631.5
CDS-3UTR TCA 90 bp CCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGAGGGGTGGGATGGAGGCCCGGGCCTCGCGGCTaGCCCAGGACCGGGCTGAGA +
Preference number: 4 (lower is better)
Translates to: PPKLYLQHEAGVRGVGWRPGPRG*PRTGLR
Trigger: TCTCAGCCCGGTCCTGGGTCAGCCGCGAGGCCCGGG...CCTCCATCCCACCCCTCTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
CDS-3UTR TCA 90 bp GTCGCAGTTCCAGTCAACGCATATGTGGCAACAAATGGAGCTGAGAAGGAAGGGCCCGGGCCTCGCGGCTaGCCCAGGACCGGGCTGAGA +
Preference number: 4 (lower is better)
Translates to: VAVPVNAYVATNGAEKEGPGPRG*PRTGLR
Trigger: TCTCAGCCCGGTCCTGGGTCAGCCGCGAGGCCCGGG...CCCTTCCTTCTCAGCTCCATTTGTTGCCACATATGCGTTGACTGGAACTGCGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR GCA 90 bp TCAGTGACGTGTCCCCGGCCATGGCCCGACTTGCCTCTGCTGCTGACGTGGGCATCCACTGCTAAGACTTaGTGCCACACCGCGGCCATT +
Preference number: 4 (lower is better)
Translates to: SVTCPRPWPDLPLLLTWASTAKT*CHTAAI
Trigger: AATGGCCGCGGTGTGGCAGCAAGTCTTAGCAGTGGA...TGCCCACGTCAGCAGCAGAGGCAAGTCGGGCCATGGCCGGGGACACGTCACTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486125.5
ENST00000498631.5
CDS-3UTR GCA 90 bp TTGGAGAGGGACCAGGCGAAGTCGGAGACACCACGGGTGTGGCCCCGTAGCACGGGCTACTGCGGACGATaGTGTTGCTATAGGCACGAG +
Preference number: 4 (lower is better)
Translates to: LERDQAKSETPRVWPRSTGYCGR*CCYRHE
Trigger: CTCGTGCCTATAGCAACAGCATCGTCCGCAGTAGCC...CGTGCTACGGGGCCACACCCGTGGTGTCTCCGACTTCGCCTGGTCCCTCTCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498631.5
CDS-3UTR GCA 90 bp GGAGCCGGCCCTCAGCATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGCTGACAGAACGACGGTaGCCACGGGCCCCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: GAGPQHDHRNFIYNTRLELTERR*PRAPRA
Trigger: GGCCCTGGGGGCCCGTGGGCACCGTCGTTCTGTCAG...CTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCATGCTGAGGGCCGGCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
CDS-3UTR GCA 90 bp CTCAAAGTCCTCCATGCGGTCAAGAGTAGTGCGGCTACTGCGGACGATGCTGTTCTGACAGAACGACGGTaGCCACGGGCCCCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: LKVLHAVKSSAATADDAVLTERR*PRAPRA
Trigger: GGCCCTGGGGGCCCGTGGGCACCGTCGTTCTGTCAG...AACAGCATCGTCCGCAGTAGCCGCACTACTCTTGACCGCATGGAGGACTTTGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000486125.5
ENST00000498631.5
CDS-3UTR GCA 90 bp AGGCGGTGTCGGTCATCATTGGCGAAGCGCACCCTTGGGACTGCCTCATCCACGCGCCGGCGGATATACTaGGTCCGAAACTCGCGTCCA +
Preference number: 4 (lower is better)
Translates to: RRCRSSLAKRTLGTASSTRRRIY*VRNSRP
Trigger: TGGACGCGAGTTTCGGACGCAGTATATCCGCCGGCG...CGTGGATGAGGCAGTCCCAAGGGTGCGCTTCGCCAATGATGACCGACACCGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498631.5
CDS-3UTR CCA 90 bp ATGCGCATGGTGGCATCCAGTGAGGTGGACACGAGGATGTCATTGGAGAGGGACGGGGCAGGCACCAGCTaGCACAGGGAGATGCTGCCG +
Preference number: 4 (lower is better)
Translates to: MRMVASSEVDTRMSLERDGAGTS*HREMLP
Trigger: CGGCAGCATCTCCCTGTGCCAGCTGGTGCCTGCCCC...GTCCCTCTCCAATGACATCCTCGTGTCCACCTCACTGGATGCCACCATGCGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498631.5
CDS-3UTR CCA 90 bp CCGCAAAGGCATAGTTCTCGCTCAGTGACGTGTCCCCGGCCATGGCCCGACTTGAGGCCCAGATGCGCATaGTGGCATCCAGTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: PQRHSSRSVTCPRPWPDLRPRCA*WHPVRW
Trigger: CCACCTCACTGGATGCCACCATGCGCATCTGGGCCT...CAAGTCGGGCCATGGCCGGGGACACGTCACTGAGCGAGAACTATGCCTTTGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498631.5
CDS-3UTR TCA 90 bp CCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGAGGGGTGGGATGGAGGCCCCCGGAGCGGCCCTaGGACCACTGTCGCCGGTTC +
Preference number: 4 (lower is better)
Translates to: PPKLYLQHEAGVRGVGWRPPERP*DHCRRF
Trigger: GAACCGGCGACAGTGGTCTCAGGGCCGCTCCGGGGG...CCTCCATCCCACCCCTCTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
CDS-3UTR TCA 90 bp CTCCATGCGGTCAAGAGTAGTGCGGCTACTGCGGACGATGCTGTTGCTATAGGCACTTGCCTCTGCTGCTaGCGTGGGCACCACGCTGCC +
Preference number: 4 (lower is better)
Translates to: LHAVKSSAATADDAVAIGTCLCC*RGHHAA
Trigger: GGCAGCGTGGTGCCCACGTCAGCAGCAGAGGCAAGT...GCCTATAGCAACAGCATCGTCCGCAGTAGCCGCACTACTCTTGACCGCATGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486125.5
ENST00000498631.5
CDS-3UTR GCA 90 bp CGATGCTGTTGCTATAGGCACGAGCACTGCCTGGCTCGGAGAGGGGCCCGTAGCTGCGGACGATGCTGTTaGTATAGGCACGAGCACTGC +
Preference number: 4 (lower is better)
Translates to: RCCCYRHEHCLARRGARSCGRCC*YRHEHC
Trigger: GCAGTGCTCGTGCCTATAGCAACAGCATCGTCCGCA...GCTACGGGCCCCTCTCCGAGCCAGGCAGTGCTCGTGCCTATAGCAACAGCATCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486125.5
ENST00000498631.5
CDS-3UTR GCA 90 bp GATACATGCCCGCAAAGGCATAGTTCTCGCTCAGTGACGTGTCCCCGGCCATGGGCTGGCACAGGGAGATaGTGCCGTCGAGTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: DTCPQRHSSRSVTCPRPWAGTGR*CRRVSS
Trigger: GCTGCTCACTCGACGGCAGCATCTCCCTGTGCCAGC...CCATGGCCGGGGACACGTCACTGAGCGAGAACTATGCCTTTGCGGGCATGTATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498631.5
CDS-3UTR GCA 90 bp CCGGCCCTCAGCATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGCTGCCCGCTGCCCTCTaGCCTGTCCGTCCCCGGCAG +
Preference number: 4 (lower is better)
Translates to: PALSMTTETLFTTRGWSKLPAAL*PVRPRQ
Trigger: CTGCCGGGGACGGACAGGGCAGAGGGCAGCGGGCAG...CTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCATGCTGAGGGCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
CDS-3UTR GCA 90 bp AGGATCATCTTCCCTGATGCTGTCACCATAAAGAGCCCACTCCCCCAACTTCTGCTGCCCGCTGCCCTCTaGCCTGTCCGTCCCCGGCAG +
Preference number: 4 (lower is better)
Translates to: RIIFPDAVTIKSPLPQLLLPAAL*PVRPRQ
Trigger: CTGCCGGGGACGGACAGGGCAGAGGGCAGCGGGCAG...CAGAAGTTGGGGGAGTGGGCTCTTTATGGTGACAGCATCAGGGAAGATGATCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR CCA 90 bp AGGATCATCCTCAAAGTCCTCCATGCGGTCAAGAGTAGTGCGGCTACTGCGGACGGCACGAGCACTGCCTaGCTCGGAGAGGGGCCCGTA +
Preference number: 4 (lower is better)
Translates to: RIILKVLHAVKSSAATADGTSTA*LGEGPV
Trigger: TACGGGCCCCTCTCCGAGCCAGGCAGTGCTCGTGCC...GTCCGCAGTAGCCGCACTACTCTTGACCGCATGGAGGACTTTGAGGATGATCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486125.5
ENST00000498631.5
CDS-3UTR CCA 90 bp CTCCATGCGGTCAAGAGTAGTGCGGCTACTGCGGACGATGCTGTTGCTATAGGCACGTGTCCCCGGCCATaGCCCGACTTGCCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: LHAVKSSAATADDAVAIGTCPRP*PDLPLL
Trigger: CAGCAGAGGCAAGTCGGGCCATGGCCGGGGACACGT...GCCTATAGCAACAGCATCGTCCGCAGTAGCCGCACTACTCTTGACCGCATGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486125.5
ENST00000498631.5
CDS-3UTR CCA 90 bp ATTAGCCGAGCTTGCTGGTGCGCGCCTGTAGTTCCAGCTATTCGGGAAGCTGAGGCACGCGAAGCACTGTaGGTGGGGCAGGCACCAGCT +
Preference number: 4 (lower is better)
Translates to: ISRACWCAPVVPAIREAEAREAL*VGQAPA
Trigger: AGCTGGTGCCTGCCCCACCCACAGTGCTTCGCGTGC...CTCAGCTTCCCGAATAGCTGGAACTACAGGCGCGCACCAGCAAGCTCGGCTAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR CCA 90 bp CGCCAACTCCTCCACTGTCACTACCCTGGTGCAAGTCCCCATCACTGCGCTCAGGTGCCTGGGTCTCTCTaGGAGTTGGTCCTGCACACC +
Preference number: 4 (lower is better)
Translates to: RQLLHCHYPGASPHHCAQVPGSL*ELVLHT
Trigger: GGTGTGCAGGACCAACTCCCAGAGAGACCCAGGCAC...CTGAGCGCAGTGATGGGGACTTGCACCAGGGTAGTGACAGTGGAGGAGTTGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR TCA 90 bp ATCTTGTGTGACTCCAATGAGAGAGAAGCCCTGGAAACTTGTGCCTGGGTCTCTCCCCCGGAGCGGCCCTaGGACCACTGTCGCCGGTTC +
Preference number: 4 (lower is better)
Translates to: ILCDSNEREALETCAWVSPPERP*DHCRRF
Trigger: GAACCGGCGACAGTGGTCTCAGGGCCGCTCCGGGGG...AGAGACCCAGGCACAAGTTTCCAGGGCTTCTCTCTCATTGGAGTCACACAAGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR GCA 90 bp GCCTGTCCTCATAGACGGCACGGTTCATCTGCGCCTGCAGCTGGTAGGAGCCTCCCACCAGGCGACCATTaGCATAGACATCGAGTCCCT +
Preference number: 4 (lower is better)
Translates to: ACPHRRHGSSAPAAGRSLPPGDH*HRHRVP
Trigger: AGGGACTCGATGTCTATGGCAATGGTCGCCTGGTGG...GAGGCTCCTACCAGCTGCAGGCGCAGATGAACCGTGCCGTCTATGAGGACAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486125.5
CDS-3UTR GCA 90 bp ATTAGCCGAGCTTGCTGGTGCGCGCCTGTAGTTCCAGCTATTCGGGAAGCTGAGGGCACAGGGAGATGCTaGCGTCGAGTGAGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: ISRACWCAPVVPAIREAEGTGRC*RRVSSR
Trigger: CCTGCTGCTCACTCGACGGCAGCATCTCCCTGTGCC...CTCAGCTTCCCGAATAGCTGGAACTACAGGCGCGCACCAGCAAGCTCGGCTAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR GCA 90 bp GGAGCCGGCCCTCAGCATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGCGCACATGTCCTCACTaGCCGTCACCACGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: GAGPQHDHRNFIYNTRLERTCPH*PSPRRP
Trigger: GGGCCTGCGTGGTGACGGGCAGTGAGGACATGTGCG...CTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCATGCTGAGGGCCGGCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
CDS-3UTR GCA 90 bp CCGGCCCTCAGCATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGCCTGGAGCTGCCCGCTaGCCTCTGCCCTGTCCGTCC +
Preference number: 4 (lower is better)
Translates to: PALSMTTETLFTTRGWSKPGAAR*PLPCPS
Trigger: GGACGGACAGGGCAGAGGGCAGCGGGCAGCTCCAGG...CTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCATGCTGAGGGCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
CDS-3UTR GCA 90 bp AGGATCATCTTCCCTGATGCTGTCACCATAAAGAGCCCACTCCCCCAACTTCTGCCTGGAGCTGCCCGCTaGCCTCTGCCCTGTCCGTCC +
Preference number: 4 (lower is better)
Translates to: RIIFPDAVTIKSPLPQLLPGAAR*PLPCPS
Trigger: GGACGGACAGGGCAGAGGGCAGCGGGCAGCTCCAGG...CAGAAGTTGGGGGAGTGGGCTCTTTATGGTGACAGCATCAGGGAAGATGATCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR GCA 90 bp CGCCAACTCCTCCACTGTCACTACCCTGGTGCAAGTCCCCATCACTGCGCTCAGCTGGGGTCATGGTGGTaGATGTCTGTGGTCCCAGCT +
Preference number: 4 (lower is better)
Translates to: RQLLHCHYPGASPHHCAQLGSWW*MSVVPA
Trigger: AGCTGGGACCACAGACATGCACCACCATGACCCCAG...CTGAGCGCAGTGATGGGGACTTGCACCAGGGTAGTGACAGTGGAGGAGTTGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR CCA 90 bp TGGTGTTGCACACTGTGCAGAAAAACAGTAACAGAGCAGGCCTCAACTGCGATCCTGCCGACGCAGCGCTaGGGGGTGCCCAGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: WCCTLCRKTVTEQASTAILPTQR*GVPSLG
Trigger: GCCAAGGCTGGGCACCCCCCAGCGCTGCGTCGGCAG...GATCGCAGTTGAGGCCTGCTCTGTTACTGTTTTTCTGCACAGTGTGCAACACCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR CCA 90 bp GGAGCCGGCCCTCAGCATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGGAGACACCACGGGTGTaGCCCCGTAGCACGCGAAGC +
Preference number: 4 (lower is better)
Translates to: GAGPQHDHRNFIYNTRLEETPRV*PRSTRS
Trigger: GCTTCGCGTGCTACGGGGCCACACCCGTGGTGTCTC...CTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCATGCTGAGGGCCGGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
3UTR CAA 72 bp ATGGTGGCATCCAGTGAGGTGGACACGAGGATGTCATaGGAGAGGGACCAGGCGAAGTCGGAGACACCACGG +
Preference number: 4 (lower is better)
Translates to: MVASSEVDTRMS*ERDQAKSETPR
Trigger: CCGTGGTGTCTCCGACTTCGCCTGGTCCCTCTCCAATGACATCCTCGTGTCCACCTCACTGGATGCCACCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498631.5
CDS-3UTR TCA 90 bp CTCAAAGTCCTCCATGCGGTCAAGAGTAGTGCGGCTACTGCGGACGATGCTGTTCAAGGGCCTGGAATGTaGGCGTCCCGAGCGAAGGGA +
Preference number: 4 (lower is better)
Translates to: LKVLHAVKSSAATADDAVQGPGM*ASRAKG
Trigger: TCCCTTCGCTCGGGACGCTCACATTCCAGGCCCTTG...AACAGCATCGTCCGCAGTAGCCGCACTACTCTTGACCGCATGGAGGACTTTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486125.5
CDS-3UTR TCA 90 bp CCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGAGGGGTGGGATGGAGGGGCCCTGCAGCTTGTTaGCAGCAGCCTTGGCCGCCC +
Preference number: 4 (lower is better)
Translates to: PPKLYLQHEAGVRGVGWRGPAAC*QQPWPP
Trigger: GGGCGGCCAAGGCTGCTGTCAACAAGCTGCAGGGCC...CCTCCATCCCACCCCTCTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
CDS-3UTR TCA 90 bp AGGATCATCTTCCCTGATGCTGTCACCATAAAGAGCCCACTCCCCCAACTTCTGGGCCCTGCAGCTTGTTaGCAGCAGCCTTGGCCGCCC +
Preference number: 4 (lower is better)
Translates to: RIIFPDAVTIKSPLPQLLGPAAC*QQPWPP
Trigger: GGGCGGCCAAGGCTGCTGTCAACAAGCTGCAGGGCC...CAGAAGTTGGGGGAGTGGGCTCTTTATGGTGACAGCATCAGGGAAGATGATCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR TCA 90 bp CCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGAGGGGTGGGATGGAGGCCCGCCTCCAGACGATaGCCATGCCGCTGGCGTCAC +
Preference number: 4 (lower is better)
Translates to: PPKLYLQHEAGVRGVGWRPASRR*PCRWRH
Trigger: GTGACGCCAGCGGCATGGTCATCGTCTGGAGGCGGG...CCTCCATCCCACCCCTCTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
CDS-3UTR GCA 90 bp CCGGCCCTCAGCATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGGACCACCTCCGGGGCTaGCTCCGGTTCTTGAGGCCC +
Preference number: 4 (lower is better)
Translates to: PALSMTTETLFTTRGWSKDHLRG*LRFLRP
Trigger: GGGCCTCAAGAACCGGAGGCAGCCCCGGAGGTGGTC...CTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCATGCTGAGGGCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000218056.9
CDS-3UTR GCA 90 bp CGCCAACTCCTCCACTGTCACTACCCTGGTGCAAGTCCCCATCACTGCGCTCAGGTGGAAACGTTGGTGTaGGGTACGCGTTGTACCTCG +
Preference number: 4 (lower is better)
Translates to: RQLLHCHYPGASPHHCAQVETLV*GTRCTS
Trigger: CGAGGTACAACGCGTACCGCACACCAACGTTTCCAC...CTGAGCGCAGTGATGGGGACTTGCACCAGGGTAGTGACAGTGGAGGAGTTGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR GCA 90 bp CGCCAACTCCTCCACTGTCACTACCCTGGTGCAAGTCCCCATCACTGCGCTCAGTGCGGACGATGCTGTTaGTATAGGCACGAGCACTGC +
Preference number: 4 (lower is better)
Translates to: RQLLHCHYPGASPHHCAQCGRCC*YRHEHC
Trigger: GCAGTGCTCGTGCCTATAGCAACAGCATCGTCCGCA...CTGAGCGCAGTGATGGGGACTTGCACCAGGGTAGTGACAGTGGAGGAGTTGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR GCA 90 bp ATTAGCCGAGCTTGCTGGTGCGCGCCTGTAGTTCCAGCTATTCGGGAAGCTGAGGCAAGTCCCCATCACTaGGCTCAGAGGGGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: ISRACWCAPVVPAIREAEASPHH*AQRGLL
Trigger: CAGGAGACCCCTCTGAGCGCAGTGATGGGGACTTGC...CTCAGCTTCCCGAATAGCTGGAACTACAGGCGCGCACCAGCAAGCTCGGCTAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR CCA 90 bp GGAGCCGGCCCTCAGCATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGTTCTCCCGCAGCAGCTaGCTGCGCCGGCGGATATAC +
Preference number: 4 (lower is better)
Translates to: GAGPQHDHRNFIYNTRLEFSRSS*LRRRIY
Trigger: GTATATCCGCCGGCGCAGCCAGCTGCTGCGGGAGAA...CTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCATGCTGAGGGCCGGCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
CDS-3UTR CCA 90 bp CTCAAAGTCCTCCATGCGGTCAAGAGTAGTGCGGCTACTGCGGACGATGCTGTTTTCTCCCGCAGCAGCTaGCTGCGCCGGCGGATATAC +
Preference number: 4 (lower is better)
Translates to: LKVLHAVKSSAATADDAVFSRSS*LRRRIY
Trigger: GTATATCCGCCGGCGCAGCCAGCTGCTGCGGGAGAA...AACAGCATCGTCCGCAGTAGCCGCACTACTCTTGACCGCATGGAGGACTTTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486125.5
ENST00000498631.5
CDS-3UTR CCA 90 bp ATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGAGGGGTGGGATGCTGCCGACGCAGCGCTaGGGGGTGCCCAGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: MTTETLFTTRGWSKRGGMLPTQR*GVPSLG
Trigger: GCCAAGGCTGGGCACCCCCCAGCGCTGCGTCGGCAG...CATCCCACCCCTCTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
CDS-3UTR CCA 90 bp CCGGCCCTCAGCATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGGGCACGAGCACTGCCTaGCTCGGAGAGGGGCCCGTA +
Preference number: 4 (lower is better)
Translates to: PALSMTTETLFTTRGWSKGTSTA*LGEGPV
Trigger: TACGGGCCCCTCTCCGAGCCAGGCAGTGCTCGTGCC...CTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCATGCTGAGGGCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
CDS-3UTR CCA 90 bp CCGGCCCTCAGCATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGCCTCTGCTGCTGACGTaGGCACCACGCTGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: PALSMTTETLFTTRGWSKPLLLT*APRCQG
Trigger: CCCCTGGCAGCGTGGTGCCCACGTCAGCAGCAGAGG...CTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCATGCTGAGGGCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
CDS-3UTR CCA 90 bp CCGGCCCTCAGCATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGGGGGCAGGCACCAGCTaGCACAGGGAGATGCTGCCG +
Preference number: 4 (lower is better)
Translates to: PALSMTTETLFTTRGWSKGAGTS*HREMLP
Trigger: CGGCAGCATCTCCCTGTGCCAGCTGGTGCCTGCCCC...CTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCATGCTGAGGGCCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
CDS-3UTR CCA 90 bp CCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGAGGGGTGGGATGGAGGGGGGCAGGCACCAGCTaGCACAGGGAGATGCTGCCG +
Preference number: 4 (lower is better)
Translates to: PPKLYLQHEAGVRGVGWRGAGTS*HREMLP
Trigger: CGGCAGCATCTCCCTGTGCCAGCTGGTGCCTGCCCC...CCTCCATCCCACCCCTCTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
CDS-3UTR CCA 90 bp CCAGGCGGTGTCGGTCATCATTGGCGAAGCGCACCCTTGGGACTGCCTCATCCAACACGAGGATGTCATTaGAGAGGGACCAGGCGAAGT +
Preference number: 4 (lower is better)
Translates to: PGGVGHHWRSAPLGLPHPTRGCH*RGTRRS
Trigger: ACTTCGCCTGGTCCCTCTCCAATGACATCCTCGTGT...TGGATGAGGCAGTCCCAAGGGTGCGCTTCGCCAATGATGACCGACACCGCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498631.5
CDS-3UTR CCA 90 bp AGGCGGTGTCGGTCATCATTGGCGAAGCGCACCCTTGGGACTGCCTCATCCACGTGGCATCCAGTGAGGTaGACACGAGGATGTCATTGG +
Preference number: 4 (lower is better)
Translates to: RRCRSSLAKRTLGTASSTWHPVR*TRGCHW
Trigger: CCAATGACATCCTCGTGTCCACCTCACTGGATGCCA...CGTGGATGAGGCAGTCCCAAGGGTGCGCTTCGCCAATGATGACCGACACCGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498631.5
CDS-3UTR TCA 90 bp CCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGAGGGGTGGGATGGAGGACTTGCCTCTGCTGCTaGCGTGGGCACCACGCTGCC +
Preference number: 4 (lower is better)
Translates to: PPKLYLQHEAGVRGVGWRTCLCC*RGHHAA
Trigger: GGCAGCGTGGTGCCCACGTCAGCAGCAGAGGCAAGT...CCTCCATCCCACCCCTCTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
CDS-3UTR TCA 90 bp GGAGCCGGCCCTCAGCATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGATAGTTCTCGCTCAGTaGCGTGTCCCCGGCCATGGC +
Preference number: 4 (lower is better)
Translates to: GAGPQHDHRNFIYNTRLEIVLAQ*RVPGHG
Trigger: GCCATGGCCGGGGACACGTCACTGAGCGAGAACTAT...CTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCATGCTGAGGGCCGGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
CDS-3UTR TCA 90 bp GTCGCAGTTCCAGTCAACGCATATGTGGCAACAAATGGAGCTGAGAAGGAAGGGGACCCAGGACCGGGCTaGGATGCTGGTCACAGGGCT +
Preference number: 4 (lower is better)
Translates to: VAVPVNAYVATNGAEKEGDPGPG*DAGHRA
Trigger: AGCCCTGTGACCAGCATCTCAGCCCGGTCCTGGGTC...CCCTTCCTTCTCAGCTCCATTTGTTGCCACATATGCGTTGACTGGAACTGCGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR TCA 90 bp GGAGCCGGCCCTCAGCATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGGCTGCGCACAGGATGTaGGCTCTGCTCGATGGGGAA +
Preference number: 4 (lower is better)
Translates to: GAGPQHDHRNFIYNTRLEAAHRM*ALLDGE
Trigger: TTCCCCATCGAGCAGAGCTCACATCCTGTGCGCAGC...CTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCATGCTGAGGGCCGGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
CDS-3UTR TCA 90 bp TGGTGTTGCACACTGTGCAGAAAAACAGTAACAGAGCAGGCCTCAACTGCGATCCCCGCCTCCAGACGATaGCCATGCCGCTGGCGTCAC +
Preference number: 4 (lower is better)
Translates to: WCCTLCRKTVTEQASTAIPASRR*PCRWRH
Trigger: GTGACGCCAGCGGCATGGTCATCGTCTGGAGGCGGG...GATCGCAGTTGAGGCCTGCTCTGTTACTGTTTTTCTGCACAGTGTGCAACACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR TCA 90 bp GGAGCCGGCCCTCAGCATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGGGCGAGTGGATCGCTTaGGCCCAGGAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: GAGPQHDHRNFIYNTRLEGEWIA*AQEFKT
Trigger: GGTCTTGAACTCCTGGGCTCAAGCGATCCACTCGCC...CTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCATGCTGAGGGCCGGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR TCA 90 bp GATGCTGTCACCATAAAGAGCCCACTCCCCCAACTTCTGCAGCTCTGTCTCCCAGAGACAGGGGTGGTCTaGGGGATGGAGATTCCGCCA +
Preference number: 4 (lower is better)
Translates to: DAVTIKSPLPQLLQLCLPETGVV*GMEIPP
Trigger: TGGCGGAATCTCCATCCCTCAGACCACCCCTGTCTC...TGGGAGACAGAGCTGCAGAAGTTGGGGGAGTGGGCTCTTTATGGTGACAGCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR GCA 90 bp ATCTTGTGTGACTCCAATGAGAGAGAAGCCCTGGAAACTTGTGCCTGGGTCTCTCCCGCAGCAGCTGGCTaGGCCGGCGGATATACTGCG +
Preference number: 4 (lower is better)
Translates to: ILCDSNEREALETCAWVSPAAAG*AGGYTA
Trigger: CGCAGTATATCCGCCGGCGCAGCCAGCTGCTGCGGG...AGAGACCCAGGCACAAGTTTCCAGGGCTTCTCTCTCATTGGAGTCACACAAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR GCA 90 bp CCGGCCCTCAGCATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGACGTGGGCACCACGCTaGCAGGGGGCCTGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: PALSMTTETLFTTRGWSKTWAPR*QGACPH
Trigger: ATGAGGACAGGCCCCCTGGCAGCGTGGTGCCCACGT...CTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCATGCTGAGGGCCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
CDS-3UTR GCA 90 bp CCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGAGGGGTGGGATGGAGGACGTGGGCACCACGCTaGCAGGGGGCCTGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: PPKLYLQHEAGVRGVGWRTWAPR*QGACPH
Trigger: ATGAGGACAGGCCCCCTGGCAGCGTGGTGCCCACGT...CCTCCATCCCACCCCTCTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
CDS-3UTR GCA 90 bp CCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGAGGGGTGGGATGGAGGCGCACATGTCCTCACTaGCCGTCACCACGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: PPKLYLQHEAGVRGVGWRRTCPH*PSPRRP
Trigger: GGGCCTGCGTGGTGACGGGCAGTGAGGACATGTGCG...CCTCCATCCCACCCCTCTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
CDS-3UTR GCA 90 bp GGAGCCGGCCCTCAGCATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGGGTGCACTGTGGCCCTaGAGCTTGTTGACAGCAGCC +
Preference number: 4 (lower is better)
Translates to: GAGPQHDHRNFIYNTRLEGALWP*SLLTAA
Trigger: GGCTGCTGTCAACAAGCTGCAGGGCCACAGTGCACC...CTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCATGCTGAGGGCCGGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
CDS-3UTR GCA 90 bp ATTAGCCGAGCTTGCTGGTGCGCGCCTGTAGTTCCAGCTATTCGGGAAGCTGAGGCCTTAACTTCCCGTTaGTCCTGCACCAGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: ISRACWCAPVVPAIREAEALTSR*SCTSLG
Trigger: CCCCAAGCTGGTGCAGGAGCAACGGGAAGTTAAGGC...CTCAGCTTCCCGAATAGCTGGAACTACAGGCGCGCACCAGCAAGCTCGGCTAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR CCA 90 bp CCGGCCCTCAGCATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGGGGGGTGCCCAGCCTTaGCATTCTCCCGCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: PALSMTTETLFTTRGWSKGGAQP*HSPAAA
Trigger: AGCTGCTGCGGGAGAATGCCAAGGCTGGGCACCCCC...CTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCATGCTGAGGGCCGG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
CDS-3UTR CCA 90 bp CATGATACATGCCCGCAAAGGCATAGTTCTCGCTCAGTGACGTGTCCCCGGCCAGGTGTCGGTCATCATTaGCGAAGCGCACCCTTGGGA +
Preference number: 4 (lower is better)
Translates to: HDTCPQRHSSRSVTCPRPGVGHH*RSAPLG
Trigger: TCCCAAGGGTGCGCTTCGCCAATGATGACCGACACC...TGGCCGGGGACACGTCACTGAGCGAGAACTATGCCTTTGCGGGCATGTATCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498631.5
CDS-3UTR CCA 90 bp CCGGCCCTCAGCATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGGCACGCGAAGCACTGTaGGTGGGGCAGGCACCAGCT +
Preference number: 4 (lower is better)
Translates to: PALSMTTETLFTTRGWSKAREAL*VGQAPA
Trigger: AGCTGGTGCCTGCCCCACCCACAGTGCTTCGCGTGC...CTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCATGCTGAGGGCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
CDS-3UTR CCA 90 bp CTGGAAACTTGTGCCTGGGTCTCTCTGGGAGTTGGTCCTGCACACCATTTCTTTGAGACACCACGGGTGTaGCCCCGTAGCACGCGAAGC +
Preference number: 4 (lower is better)
Translates to: LETCAWVSLGVGPAHHFFETPRV*PRSTRS
Trigger: GCTTCGCGTGCTACGGGGCCACACCCGTGGTGTCTC...AAAGAAATGGTGTGCAGGACCAACTCCCAGAGAGACCCAGGCACAAGTTTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR CCA 90 bp ATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGAGGGGTGGGATGCGTCCCCGGCAGAGCTaGGAGCCGGCCCTCAGCATG +
Preference number: 4 (lower is better)
Translates to: MTTETLFTTRGWSKRGGMRPRQS*EPALSM
Trigger: CATGCTGAGGGCCGGCTCCCAGCTCTGCCGGGGACG...CATCCCACCCCTCTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
CDS-3UTR TCA 90 bp CCGGCCCTCAGCATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGTGGGCAGCGCCCGGGTaGCACACAGCGATTCAGAAC +
Preference number: 4 (lower is better)
Translates to: PALSMTTETLFTTRGWSKWAAPG*HTAIQN
Trigger: GTTCTGAATCGCTGTGTGTCACCCGGGCGCTGCCCA...CTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCATGCTGAGGGCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000218056.9
CDS-3UTR TCA 90 bp CCGGCCCTCAGCATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGCAAGGGCCTGGAATGTaGGCGTCCCGAGCGAAGGGA +
Preference number: 4 (lower is better)
Translates to: PALSMTTETLFTTRGWSKQGPGM*ASRAKG
Trigger: TCCCTTCGCTCGGGACGCTCACATTCCAGGCCCTTG...CTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCATGCTGAGGGCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000218056.9
CDS-3UTR TCA 90 bp CCGGCCCTCAGCATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGGGTAGGAGCCTCTGCTaGCAGAACGACGGTGCCCAC +
Preference number: 4 (lower is better)
Translates to: PALSMTTETLFTTRGWSKGRSLC*QNDGAH
Trigger: GTGGGCACCGTCGTTCTGTCAGCAGAGGCTCCTACC...CTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCATGCTGAGGGCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
CDS-3UTR TCA 90 bp ATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGAGGGGTGGGATGGATGCTGCCGTCGAGTaGGCAGCAGGCCAGGCGGTG +
Preference number: 4 (lower is better)
Translates to: MTTETLFTTRGWSKRGGMDAAVE*AAGQAV
Trigger: CACCGCCTGGCCTGCTGCTCACTCGACGGCAGCATC...CATCCCACCCCTCTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
CDS-3UTR TCA 90 bp CCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGAGGGGTGGGATGGAGGAGCATTGATGAGCAGTaGGGGATCCCGGGCCTCGCG +
Preference number: 4 (lower is better)
Translates to: PPKLYLQHEAGVRGVGWRSIDEQ*GIPGLA
Trigger: CGCGAGGCCCGGGATCCCTCACTGCTCATCAATGCT...CCTCCATCCCACCCCTCTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
CDS-3UTR TCA 90 bp CGCCAACTCCTCCACTGTCACTACCCTGGTGCAAGTCCCCATCACTGCGCTCAGAGCCGGCCCTCAGCATaGCCACCGAAACTTTATTTA +
Preference number: 4 (lower is better)
Translates to: RQLLHCHYPGASPHHCAQSRPSA*PPKLYL
Trigger: TAAATAAAGTTTCGGTGGTCATGCTGAGGGCCGGCT...CTGAGCGCAGTGATGGGGACTTGCACCAGGGTAGTGACAGTGGAGGAGTTGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR TCA 90 bp CGCCAACTCCTCCACTGTCACTACCCTGGTGCAAGTCCCCATCACTGCGCTCAGCAGAGGGAGCCTCTATaGCCAAGTCAGATCATGTTC +
Preference number: 4 (lower is better)
Translates to: RQLLHCHYPGASPHHCAQQREPL*PSQIMF
Trigger: GAACATGATCTGACTTGGTCATAGAGGCTCCCTCTG...CTGAGCGCAGTGATGGGGACTTGCACCAGGGTAGTGACAGTGGAGGAGTTGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR TCA 90 bp CCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGAGGGGTGGGATGGAGGGGGAATATCGCCCCCTaGGGAGGCAGCAGAGTCCTG +
Preference number: 4 (lower is better)
Translates to: PPKLYLQHEAGVRGVGWRGNIAP*GGSRVL
Trigger: CAGGACTCTGCTGCCTCCTCAGGGGGCGATATTCCC...CCTCCATCCCACCCCTCTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR TCA 90 bp ATCTTGTGTGACTCCAATGAGAGAGAAGCCCTGGAAACTTGTGCCTGGGTCTCTGGCCCGAGGATCGCTTaGACCCAGGAGGTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: ILCDSNEREALETCAWVSGPRIA*TQEVEA
Trigger: AGCCTCCACCTCCTGGGTTCAAGCGATCCTCGGGCC...AGAGACCCAGGCACAAGTTTCCAGGGCTTCTCTCTCATTGGAGTCACACAAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR GCA 90 bp GGAGCCGGCCCTCAGCATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGACTGCTAAGACTTGCTaGCACACCGCGGCCATTCCC +
Preference number: 4 (lower is better)
Translates to: GAGPQHDHRNFIYNTRLETAKTC*HTAAIP
Trigger: GGGAATGGCCGCGGTGTGGCAGCAAGTCTTAGCAGT...CTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCATGCTGAGGGCCGGCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
CDS-3UTR GCA 90 bp ATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGAGGGGTGGGATGCCCGCAGCAGCTGGCTaGGCCGGCGGATATACTGCG +
Preference number: 4 (lower is better)
Translates to: MTTETLFTTRGWSKRGGMPAAAG*AGGYTA
Trigger: CGCAGTATATCCGCCGGCGCAGCCAGCTGCTGCGGG...CATCCCACCCCTCTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
CDS-3UTR GCA 90 bp CCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGAGGGGTGGGATGGAGGTATAGGCACGAGCACTaGCTGGCTCGGAGAGGGGCC +
Preference number: 4 (lower is better)
Translates to: PPKLYLQHEAGVRGVGWRYRHEH*LARRGA
Trigger: GGCCCCTCTCCGAGCCAGGCAGTGCTCGTGCCTATA...CCTCCATCCCACCCCTCTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
CDS-3UTR GCA 90 bp CTCCATGCGGTCAAGAGTAGTGCGGCTACTGCGGACGATGCTGTTGCTATAGGCTGCGGACGATGCTGTTaGTATAGGCACGAGCACTGC +
Preference number: 4 (lower is better)
Translates to: LHAVKSSAATADDAVAIGCGRCC*YRHEHC
Trigger: GCAGTGCTCGTGCCTATAGCAACAGCATCGTCCGCA...GCCTATAGCAACAGCATCGTCCGCAGTAGCCGCACTACTCTTGACCGCATGGAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486125.5
ENST00000498631.5
CDS-3UTR GCA 90 bp CCGGCCCTCAGCATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGGCTGGCACAGGGAGATaGTGCCGTCGAGTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: PALSMTTETLFTTRGWSKAGTGR*CRRVSS
Trigger: GCTGCTCACTCGACGGCAGCATCTCCCTGTGCCAGC...CTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCATGCTGAGGGCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
CDS-3UTR GCA 90 bp GGAGCCGGCCCTCAGCATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGCAGGGATCTCTCGGATaGAGCGACCATCCTCAGAGG +
Preference number: 4 (lower is better)
Translates to: GAGPQHDHRNFIYNTRLEQGSLG*SDHPQR
Trigger: CCTCTGAGGATGGTCGCTGCATCCGAGAGATCCCTG...CTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCATGCTGAGGGCCGGCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
CDS-3UTR GCA 90 bp TTTAATAAACAACACAATGCACAGAAGGGTTGGGAATATCGCCCCCTGAGGAGGGGCAGCCTCCGGGGCTaGCTCCGGTTCTTGAGGCCC +
Preference number: 4 (lower is better)
Translates to: FNKQHNAQKGWEYRPLRRGSLRG*LRFLRP
Trigger: GGGCCTCAAGAACCGGAGGCAGCCCCGGAGGCTGCC...CCTCCTCAGGGGGCGATATTCCCAACCCTTCTGTGCATTGTGTTGTTTATTAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR GCA 90 bp CCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGAGGGGTGGGATGGAGGGTGCCAGGCAGGGGGTaGCTATGTGACCATGCCCCA +
Preference number: 4 (lower is better)
Translates to: PPKLYLQHEAGVRGVGWRVPGRG*LCDHAP
Trigger: TGGGGCATGGTCACATAGGCACCCCCTGCCTGGCAC...CCTCCATCCCACCCCTCTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR CCA 90 bp CCGGCCCTCAGCATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGTTCTCCCGCAGCAGCTaGCTGCGCCGGCGGATATAC +
Preference number: 4 (lower is better)
Translates to: PALSMTTETLFTTRGWSKFSRSS*LRRRIY
Trigger: GTATATCCGCCGGCGCAGCCAGCTGCTGCGGGAGAA...CTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCATGCTGAGGGCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
CDS-3UTR CCA 90 bp ACAAACGGGAGATTATTTCCCTCCAACAAGACTGTTGGTGCGAGTTCAGCAGCTGGCACGAGCACTGCCTaGCTCGGAGAGGGGCCCGTA +
Preference number: 4 (lower is better)
Translates to: TNGRLFPSNKTVGASSAAGTSTA*LGEGPV
Trigger: TACGGGCCCCTCTCCGAGCCAGGCAGTGCTCGTGCC...AGCTGCTGAACTCGCACCAACAGTCTTGTTGGAGGGAAATAATCTCCCGTTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR CCA 90 bp ACAAACGGGAGATTATTTCCCTCCAACAAGACTGTTGGTGCGAGTTCAGCAGCTCCTCTGCTGCTGACGTaGGCACCACGCTGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: TNGRLFPSNKTVGASSAAPLLLT*APRCQG
Trigger: CCCCTGGCAGCGTGGTGCCCACGTCAGCAGCAGAGG...AGCTGCTGAACTCGCACCAACAGTCTTGTTGGAGGGAAATAATCTCCCGTTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR CCA 90 bp AAACTTGTGCCTGGGTCTCTCTGGGAGTTGGTCCTGCACACCATTTCTTTTTGCACGTGTCCCCGGCCATaGCCCGACTTGCCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: KLVPGSLWELVLHTISFCTCPRP*PDLPLL
Trigger: CAGCAGAGGCAAGTCGGGCCATGGCCGGGGACACGT...GCAAAAAGAAATGGTGTGCAGGACCAACTCCCAGAGAGACCCAGGCACAAGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR CCA 90 bp CCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGAGGGGTGGGATGGAGGGGCGAAGCGCACCCTTaGGACTGCCTCATCCACGTG +
Preference number: 4 (lower is better)
Translates to: PPKLYLQHEAGVRGVGWRGEAHP*DCLIHV
Trigger: CACGTGGATGAGGCAGTCCCAAGGGTGCGCTTCGCC...CCTCCATCCCACCCCTCTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
CDS-3UTR CCA 90 bp GGAGCCGGCCCTCAGCATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGGGTGTCGGTCATCATTaGCGAAGCGCACCCTTGGGA +
Preference number: 4 (lower is better)
Translates to: GAGPQHDHRNFIYNTRLEGVGHH*RSAPLG
Trigger: TCCCAAGGGTGCGCTTCGCCAATGATGACCGACACC...CTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCATGCTGAGGGCCGGCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
CDS-3UTR CCA 90 bp CCGGCCCTCAGCATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGTGCCGCTGGCGTCACTaGAGGCCAGTAGGCTCTCGT +
Preference number: 4 (lower is better)
Translates to: PALSMTTETLFTTRGWSKCRWRH*RPVGSR
Trigger: ACGAGAGCCTACTGGCCTCCAGTGACGCCAGCGGCA...CTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCATGCTGAGGGCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
CDS-3UTR CCA 90 bp CCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGAGGGGTGGGATGGAGGGTTCCACCGTGTTCCTaGAGCTGCCCGCTGCCCTCT +
Preference number: 4 (lower is better)
Translates to: PPKLYLQHEAGVRGVGWRVPPCS*SCPLPS
Trigger: AGAGGGCAGCGGGCAGCTCCAGGAACACGGTGGAAC...CCTCCATCCCACCCCTCTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
CDS-3UTR CCA 90 bp ATTAGCCGAGCTTGCTGGTGCGCGCCTGTAGTTCCAGCTATTCGGGAAGCTGAGGTCTCTACCACGCTGTaGACTGACCCTAAGGTCCCA +
Preference number: 4 (lower is better)
Translates to: ISRACWCAPVVPAIREAEVSTTL*TDPKVP
Trigger: TGGGACCTTAGGGTCAGTCCACAGCGTGGTAGAGAC...CTCAGCTTCCCGAATAGCTGGAACTACAGGCGCGCACCAGCAAGCTCGGCTAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR CCA 90 bp ACCCCCAATCTGTCCCCTTCAGCAGCCAGAGGGAGCCTCTATGACCAAGTCAGAGCAGCTCAGCAATGCTaGGCCAAGCTGGAGTCTCTA +
Preference number: 4 (lower is better)
Translates to: TPNLSPSAARGSLYDQVRAAQQC*AKLESL
Trigger: TAGAGACTCCAGCTTGGCCCAGCATTGCTGAGCTGC...TCTGACTTGGTCATAGAGGCTCCCTCTGGCTGCTGAAGGGGACAGATTGGGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR TCA 90 bp ATCTTGTGTGACTCCAATGAGAGAGAAGCCCTGGAAACTTGTGCCTGGGTCTCTGGTAGGAGCCTCTGCTaGCAGAACGACGGTGCCCAC +
Preference number: 4 (lower is better)
Translates to: ILCDSNEREALETCAWVSGRSLC*QNDGAH
Trigger: GTGGGCACCGTCGTTCTGTCAGCAGAGGCTCCTACC...AGAGACCCAGGCACAAGTTTCCAGGGCTTCTCTCTCATTGGAGTCACACAAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR TCA 90 bp ATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGAGGGGTGGGATGACTTGCCTCTGCTGCTaGCGTGGGCACCACGCTGCC +
Preference number: 4 (lower is better)
Translates to: MTTETLFTTRGWSKRGGMTCLCC*RGHHAA
Trigger: GGCAGCGTGGTGCCCACGTCAGCAGCAGAGGCAAGT...CATCCCACCCCTCTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
CDS-3UTR TCA 90 bp CCGGCCCTCAGCATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGATAGTTCTCGCTCAGTaGCGTGTCCCCGGCCATGGC +
Preference number: 4 (lower is better)
Translates to: PALSMTTETLFTTRGWSKIVLAQ*RVPGHG
Trigger: GCCATGGCCGGGGACACGTCACTGAGCGAGAACTAT...CTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCATGCTGAGGGCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
CDS-3UTR TCA 90 bp AAAGGAGGTTCCTCAAAATTATCCTGCCATCCACAGACCTTGGTAGAAACTGGGGATGCTGCCGTCGAGTaGGCAGCAGGCCAGGCGGTG +
Preference number: 4 (lower is better)
Translates to: KGGSSKLSCHPQTLVETGDAAVE*AAGQAV
Trigger: CACCGCCTGGCCTGCTGCTCACTCGACGGCAGCATC...CCCAGTTTCTACCAAGGTCTGTGGATGGCAGGATAATTTTGAGGAACCTCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR TCA 90 bp ATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGAGGGGTGGGATGGACCCAGGACCGGGCTaGGATGCTGGTCACAGGGCT +
Preference number: 4 (lower is better)
Translates to: MTTETLFTTRGWSKRGGMDPGPG*DAGHRA
Trigger: AGCCCTGTGACCAGCATCTCAGCCCGGTCCTGGGTC...CATCCCACCCCTCTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
CDS-3UTR TCA 90 bp CGCCAACTCCTCCACTGTCACTACCCTGGTGCAAGTCCCCATCACTGCGCTCAGCAGGATCATCTTCCCTaGTGCTGTCACCATAAAGAG +
Preference number: 4 (lower is better)
Translates to: RQLLHCHYPGASPHHCAQQDHLP*CCHHKE
Trigger: CTCTTTATGGTGACAGCATCAGGGAAGATGATCCTG...CTGAGCGCAGTGATGGGGACTTGCACCAGGGTAGTGACAGTGGAGGAGTTGGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR GCA 90 bp GGAGCCGGCCCTCAGCATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGTCCACTGCTAAGACTTaGTGCCACACCGCGGCCATT +
Preference number: 4 (lower is better)
Translates to: GAGPQHDHRNFIYNTRLESTAKT*CHTAAI
Trigger: AATGGCCGCGGTGTGGCAGCAAGTCTTAGCAGTGGA...CTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCATGCTGAGGGCCGGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
CDS-3UTR GCA 90 bp AAACTTGTGCCTGGGTCTCTCTGGGAGTTGGTCCTGCACACCATTTCTTTTTGCTATAGGCACGAGCACTaGCTGGCTCGGAGAGGGGCC +
Preference number: 4 (lower is better)
Translates to: KLVPGSLWELVLHTISFCYRHEH*LARRGA
Trigger: GGCCCCTCTCCGAGCCAGGCAGTGCTCGTGCCTATA...GCAAAAAGAAATGGTGTGCAGGACCAACTCCCAGAGAGACCCAGGCACAAGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR GCA 90 bp GGAGCCGGCCCTCAGCATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGGGCTACTGCGGACGATaGTGTTGCTATAGGCACGAG +
Preference number: 4 (lower is better)
Translates to: GAGPQHDHRNFIYNTRLEGYCGR*CCYRHE
Trigger: CTCGTGCCTATAGCAACAGCATCGTCCGCAGTAGCC...CTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCATGCTGAGGGCCGGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
CDS-3UTR GCA 90 bp AATAAACAACACAATGCACAGAAGGGTTGGGAATATCGCCCCCTGAGGAGGCAGGCTGGCACAGGGAGATaGTGCCGTCGAGTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: NKQHNAQKGWEYRPLRRQAGTGR*CRRVSS
Trigger: GCTGCTCACTCGACGGCAGCATCTCCCTGTGCCAGC...CTGCCTCCTCAGGGGGCGATATTCCCAACCCTTCTGTGCATTGTGTTGTTTATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR GCA 90 bp GTCGCAGTTCCAGTCAACGCATATGTGGCAACAAATGGAGCTGAGAAGGAAGGGGGTGCACTGTGGCCCTaGAGCTTGTTGACAGCAGCC +
Preference number: 4 (lower is better)
Translates to: VAVPVNAYVATNGAEKEGGALWP*SLLTAA
Trigger: GGCTGCTGTCAACAAGCTGCAGGGCCACAGTGCACC...CCCTTCCTTCTCAGCTCCATTTGTTGCCACATATGCGTTGACTGGAACTGCGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR GCA 90 bp GGAGCCGGCCCTCAGCATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGGACATCAAGCACAGGTaGACTGTGGCCCTGCAGCTT +
Preference number: 4 (lower is better)
Translates to: GAGPQHDHRNFIYNTRLEDIKHR*TVALQL
Trigger: AAGCTGCAGGGCCACAGTGCACCTGTGCTTGATGTC...CTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCATGCTGAGGGCCGGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
CDS-3UTR GCA 90 bp CCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGAGGGGTGGGATGGAGGCCGAGATCACGCCACTaGACTCCAGCCTGGCGACAA +
Preference number: 4 (lower is better)
Translates to: PPKLYLQHEAGVRGVGWRPRSRH*TPAWRQ
Trigger: TTGTCGCCAGGCTGGAGTGCAGTGGCGTGATCTCGG...CCTCCATCCCACCCCTCTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR CCA 90 bp CCGGCCCTCAGCATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGTGCAGGACAAGGGCCTaGAATGTGAGCGTCCCGAGC +
Preference number: 4 (lower is better)
Translates to: PALSMTTETLFTTRGWSKCRTRA*NVSVPS
Trigger: GCTCGGGACGCTCACATTCCAGGCCCTTGTCCTGCA...CTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCATGCTGAGGGCCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000218056.9
CDS-3UTR CCA 90 bp ATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGAGGGGTGGGATGACGTGTCCCCGGCCATaGCCCGACTTGCCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: MTTETLFTTRGWSKRGGMTCPRP*PDLPLL
Trigger: CAGCAGAGGCAAGTCGGGCCATGGCCGGGGACACGT...CATCCCACCCCTCTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
CDS-3UTR CCA 90 bp AATAAACAACACAATGCACAGAAGGGTTGGGAATATCGCCCCCTGAGGAGGCAGGGCGAAGCGCACCCTTaGGACTGCCTCATCCACGTG +
Preference number: 4 (lower is better)
Translates to: NKQHNAQKGWEYRPLRRQGEAHP*DCLIHV
Trigger: CACGTGGATGAGGCAGTCCCAAGGGTGCGCTTCGCC...CTGCCTCCTCAGGGGGCGATATTCCCAACCCTTCTGTGCATTGTGTTGTTTATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR CCA 90 bp CCGGCCCTCAGCATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGAGGCCCAGATGCGCATaGTGGCATCCAGTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: PALSMTTETLFTTRGWSKRPRCA*WHPVRW
Trigger: CCACCTCACTGGATGCCACCATGCGCATCTGGGCCT...CTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCATGCTGAGGGCCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
CDS-3UTR CCA 90 bp ATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGAGGGGTGGGATGACCACGCAGGCCCCCTaGCGGAAGGACATGAGGGGA +
Preference number: 4 (lower is better)
Translates to: MTTETLFTTRGWSKRGGMTTQAP*RKDMRG
Trigger: TCCCCTCATGTCCTTCCGCCAGGGGGCCTGCGTGGT...CATCCCACCCCTCTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
CDS-3UTR CCA 90 bp ACAAACGGGAGATTATTTCCCTCCAACAAGACTGTTGGTGCGAGTTCAGCAGCTACCACGCAGGCCCCCTaGCGGAAGGACATGAGGGGA +
Preference number: 4 (lower is better)
Translates to: TNGRLFPSNKTVGASSAATTQAP*RKDMRG
Trigger: TCCCCTCATGTCCTTCCGCCAGGGGGCCTGCGTGGT...AGCTGCTGAACTCGCACCAACAGTCTTGTTGGAGGGAAATAATCTCCCGTTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR CCA 90 bp AAACTTGTGCCTGGGTCTCTCTGGGAGTTGGTCCTGCACACCATTTCTTTTTGCTGCCGCTGGCGTCACTaGAGGCCAGTAGGCTCTCGT +
Preference number: 4 (lower is better)
Translates to: KLVPGSLWELVLHTISFCCRWRH*RPVGSR
Trigger: ACGAGAGCCTACTGGCCTCCAGTGACGCCAGCGGCA...GCAAAAAGAAATGGTGTGCAGGACCAACTCCCAGAGAGACCCAGGCACAAGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR CCA 90 bp AATAAACAACACAATGCACAGAAGGGTTGGGAATATCGCCCCCTGAGGAGGCAGAGAGGGGTCTCCTGCTaGGTCCCCTGCTTCTACCCC +
Preference number: 4 (lower is better)
Translates to: NKQHNAQKGWEYRPLRRQRGVSC*VPCFYP
Trigger: GGGGTAGAAGCAGGGGACCCAGCAGGAGACCCCTCT...CTGCCTCCTCAGGGGGCGATATTCCCAACCCTTCTGTGCATTGTGTTGTTTATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR CCA 90 bp ACCCCCAATCTGTCCCCTTCAGCAGCCAGAGGGAGCCTCTATGACCAAGTCAGACTGGAAACTTGTGCCTaGGTCTCTCTGGGAGTTGGT +
Preference number: 4 (lower is better)
Translates to: TPNLSPSAARGSLYDQVRLETCA*VSLGVG
Trigger: ACCAACTCCCAGAGAGACCCAGGCACAAGTTTCCAG...TCTGACTTGGTCATAGAGGCTCCCTCTGGCTGCTGAAGGGGACAGATTGGGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR CCA 90 bp GGAGCCGGCCCTCAGCATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGAAAATTAGCTGGGCGTaGTGGTGGCAGGCGCCTGTA +
Preference number: 4 (lower is better)
Translates to: GAGPQHDHRNFIYNTRLEKISWA*WWQAPV
Trigger: TACAGGCGCCTGCCACCACCACGCCCAGCTAATTTT...CTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCATGCTGAGGGCCGGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR TCA 90 bp CCGGCCCTCAGCATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGCATGGTGGCATCCAGTaGGGTGGACACGAGGATGTC +
Preference number: 4 (lower is better)
Translates to: PALSMTTETLFTTRGWSKHGGIQ*GGHEDV
Trigger: GACATCCTCGTGTCCACCTCACTGGATGCCACCATG...CTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCATGCTGAGGGCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
CDS-3UTR TCA 90 bp ATTAGCCGAGCTTGCTGGTGCGCGCCTGTAGTTCCAGCTATTCGGGAAGCTGAGCTGTGGAGATGTTCATaGCATGCACGTTGTGCTTGG +
Preference number: 4 (lower is better)
Translates to: ISRACWCAPVVPAIREAELWRCS*HARCAW
Trigger: CCAAGCACAACGTGCATGTCATGAACATCTCCACAG...CTCAGCTTCCCGAATAGCTGGAACTACAGGCGCGCACCAGCAAGCTCGGCTAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR TCA 90 bp ACAAACGGGAGATTATTTCCCTCCAACAAGACTGTTGGTGCGAGTTCAGCAGCTAGCATTGATGAGCAGTaGGGGATCCCGGGCCTCGCG +
Preference number: 4 (lower is better)
Translates to: TNGRLFPSNKTVGASSAASIDEQ*GIPGLA
Trigger: CGCGAGGCCCGGGATCCCTCACTGCTCATCAATGCT...AGCTGCTGAACTCGCACCAACAGTCTTGTTGGAGGGAAATAATCTCCCGTTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR TCA 90 bp ATCTTGTGTGACTCCAATGAGAGAGAAGCCCTGGAAACTTGTGCCTGGGTCTCTGCTGCGCACAGGATGTaGGCTCTGCTCGATGGGGAA +
Preference number: 4 (lower is better)
Translates to: ILCDSNEREALETCAWVSAAHRM*ALLDGE
Trigger: TTCCCCATCGAGCAGAGCTCACATCCTGTGCGCAGC...AGAGACCCAGGCACAAGTTTCCAGGGCTTCTCTCTCATTGGAGTCACACAAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR TCA 90 bp AATAAACAACACAATGCACAGAAGGGTTGGGAATATCGCCCCCTGAGGAGGCAGCCTGGCGGAAGGACATaGGGGGACAGAAGATGCTGC +
Preference number: 4 (lower is better)
Translates to: NKQHNAQKGWEYRPLRRQPGGRT*GDRRCC
Trigger: GCAGCATCTTCTGTCCCCTCATGTCCTTCCGCCAGG...CTGCCTCCTCAGGGGGCGATATTCCCAACCCTTCTGTGCATTGTGTTGTTTATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR TCA 90 bp ATTAGCCGAGCTTGCTGGTGCGCGCCTGTAGTTCCAGCTATTCGGGAAGCTGAGGCACAAATGAGTCAATaGACCCCGTTCCACCGTGTT +
Preference number: 4 (lower is better)
Translates to: ISRACWCAPVVPAIREAEAQMSQ*TPFHRV
Trigger: AACACGGTGGAACGGGGTTCATTGACTCATTTGTGC...CTCAGCTTCCCGAATAGCTGGAACTACAGGCGCGCACCAGCAAGCTCGGCTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR TCA 90 bp GGAGCCGGCCCTCAGCATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGTTCCCCCTTAGGTGGTaGGTCAAGAAAAGTGCCACC +
Preference number: 4 (lower is better)
Translates to: GAGPQHDHRNFIYNTRLEFPLRW*VKKSAT
Trigger: GGTGGCACTTTTCTTGACTCACCACCTAAGGGGGAA...CTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCATGCTGAGGGCCGGCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR GCA 90 bp ATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGAGGGGTGGGATGGGCACAGGGAGATGCTaGCGTCGAGTGAGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: MTTETLFTTRGWSKRGGMGTGRC*RRVSSR
Trigger: CCTGCTGCTCACTCGACGGCAGCATCTCCCTGTGCC...CATCCCACCCCTCTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
CDS-3UTR GCA 90 bp GATGCTGTCACCATAAAGAGCCCACTCCCCCAACTTCTGCAGCTCTGTCTCCCAATGACATGCACGTTGTaGTTGGCGTTCCCCACCACA +
Preference number: 4 (lower is better)
Translates to: DAVTIKSPLPQLLQLCLPMTCTL*LAFPTT
Trigger: TGTGGTGGGGAACGCCAAGCACAACGTGCATGTCAT...TGGGAGACAGAGCTGCAGAAGTTGGGGGAGTGGGCTCTTTATGGTGACAGCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR GCA 90 bp CCGGCCCTCAGCATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGGGAAAGAGAAGACACTaGCACGGTCATCACCCGCCC +
Preference number: 4 (lower is better)
Translates to: PALSMTTETLFTTRGWSKGKRRH*HGHHPP
Trigger: GGGCGGGTGATGACCGTGGCAGTGTCTTCTCTTTCC...CTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCATGCTGAGGGCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
CDS-3UTR GCA 90 bp CCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGAGGGGTGGGATGGAGGACAGGGCTCCCCTCATaGACCACCAAACGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: PPKLYLQHEAGVRGVGWRTGLPS*TTKRLA
Trigger: AGCCAAGCGTTTGGTGGTGCATGAGGGGAGCCCTGT...CCTCCATCCCACCCCTCTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
CDS-3UTR GCA 90 bp GGAGCCGGCCCTCAGCATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGAAGCTTCTCTTCAGCTaGAGGGTCCCCTCGTTGTCT +
Preference number: 4 (lower is better)
Translates to: GAGPQHDHRNFIYNTRLEKLLFS*RVPSLS
Trigger: AGACAACGAGGGGACCCTGCAGCTGAAGAGAAGCTT...CTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCATGCTGAGGGCCGGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
CDS-3UTR GCA 90 bp GATGCTGTCACCATAAAGAGCCCACTCCCCCAACTTCTGCAGCTCTGTCTCCCAAAGCTTCTCTTCAGCTaGAGGGTCCCCTCGTTGTCT +
Preference number: 4 (lower is better)
Translates to: DAVTIKSPLPQLLQLCLPKLLFS*RVPSLS
Trigger: AGACAACGAGGGGACCCTGCAGCTGAAGAGAAGCTT...TGGGAGACAGAGCTGCAGAAGTTGGGGGAGTGGGCTCTTTATGGTGACAGCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR GCA 90 bp GTCGCAGTTCCAGTCAACGCATATGTGGCAACAAATGGAGCTGAGAAGGAAGGGTGGGATTTGGGTAGGTaGCAGGCAGGGGGTGCCTAT +
Preference number: 4 (lower is better)
Translates to: VAVPVNAYVATNGAEKEGWDLGR*QAGGAY
Trigger: ATAGGCACCCCCTGCCTGGCACCTACCCAAATCCCA...CCCTTCCTTCTCAGCTCCATTTGTTGCCACATATGCGTTGACTGGAACTGCGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR CCA 90 bp GGAGCCGGCCCTCAGCATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGAGGCTCCAGGCAAGATaGCTGCCTGCTATCAGAAAG +
Preference number: 4 (lower is better)
Translates to: GAGPQHDHRNFIYNTRLERLQAR*LPAIRK
Trigger: CTTTCTGATAGCAGGCAGCCATCTTGCCTGGAGCCT...CTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCATGCTGAGGGCCGGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
CDS-3UTR CCA 90 bp GATGCTGTCACCATAAAGAGCCCACTCCCCCAACTTCTGCAGCTCTGTCTCCCAAGGCTCCAGGCAAGATaGCTGCCTGCTATCAGAAAG +
Preference number: 4 (lower is better)
Translates to: DAVTIKSPLPQLLQLCLPRLQAR*LPAIRK
Trigger: CTTTCTGATAGCAGGCAGCCATCTTGCCTGGAGCCT...TGGGAGACAGAGCTGCAGAAGTTGGGGGAGTGGGCTCTTTATGGTGACAGCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR CCA 90 bp ATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGAGGGGTGGGATGCCCCGGGTGTTACCATaGTCATCACCCCAGCCCTGC +
Preference number: 4 (lower is better)
Translates to: MTTETLFTTRGWSKRGGMPRVLP*SSPQPC
Trigger: GCAGGGCTGGGGTGATGACCATGGTAACACCCGGGG...CATCCCACCCCTCTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000218056.9
CDS-3UTR CCA 90 bp GGAGCCGGCCCTCAGCATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGCTGCGTCCGAAACTGTaGAAACGTTGGTGTGCGGTA +
Preference number: 4 (lower is better)
Translates to: GAGPQHDHRNFIYNTRLELRPKL*KRWCAV
Trigger: TACCGCACACCAACGTTTCCACAGTTTCGGACGCAG...CTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCATGCTGAGGGCCGGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
CDS-3UTR CCA 90 bp AGGATCATCTTCCCTGATGCTGTCACCATAAAGAGCCCACTCCCCCAACTTCTGGGTGTCGGTCATCATTaGCGAAGCGCACCCTTGGGA +
Preference number: 4 (lower is better)
Translates to: RIIFPDAVTIKSPLPQLLGVGHH*RSAPLG
Trigger: TCCCAAGGGTGCGCTTCGCCAATGATGACCGACACC...CAGAAGTTGGGGGAGTGGGCTCTTTATGGTGACAGCATCAGGGAAGATGATCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR CCA 90 bp GGAGCCGGCCCTCAGCATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGACACGAGGATGTCATTaGAGAGGGACCAGGCGAAGT +
Preference number: 4 (lower is better)
Translates to: GAGPQHDHRNFIYNTRLETRGCH*RGTRRS
Trigger: ACTTCGCCTGGTCCCTCTCCAATGACATCCTCGTGT...CTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCATGCTGAGGGCCGGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
CDS-3UTR CCA 90 bp GGAGCCGGCCCTCAGCATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGTGGCATCCAGTGAGGTaGACACGAGGATGTCATTGG +
Preference number: 4 (lower is better)
Translates to: GAGPQHDHRNFIYNTRLEWHPVR*TRGCHW
Trigger: CCAATGACATCCTCGTGTCCACCTCACTGGATGCCA...CTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCATGCTGAGGGCCGGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
CDS-3UTR CCA 90 bp CCGGCCCTCAGCATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGCCCAGATGCGCATGGTaGCATCCAGTGAGGTGGACA +
Preference number: 4 (lower is better)
Translates to: PALSMTTETLFTTRGWSKPRCAW*HPVRWT
Trigger: TGTCCACCTCACTGGATGCCACCATGCGCATCTGGG...CTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCATGCTGAGGGCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
CDS-3UTR CCA 90 bp TGGTGTTGCACACTGTGCAGAAAAACAGTAACAGAGCAGGCCTCAACTGCGATCAGGCCCAGATGCGCATaGTGGCATCCAGTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: WCCTLCRKTVTEQASTAIRPRCA*WHPVRW
Trigger: CCACCTCACTGGATGCCACCATGCGCATCTGGGCCT...GATCGCAGTTGAGGCCTGCTCTGTTACTGTTTTTCTGCACAGTGTGCAACACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR CCA 90 bp ATTAGCCGAGCTTGCTGGTGCGCGCCTGTAGTTCCAGCTATTCGGGAAGCTGAGGACCTTGGTAGAAACTaGGCATCTGTGTGGTGTTGC +
Preference number: 4 (lower is better)
Translates to: ISRACWCAPVVPAIREAEDLGRN*ASVWCC
Trigger: GCAACACCACACAGATGCCCAGTTTCTACCAAGGTC...CTCAGCTTCCCGAATAGCTGGAACTACAGGCGCGCACCAGCAAGCTCGGCTAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR TCA 90 bp ATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGAGGGGTGGGATGCCTGGCGGAAGGACATaGGGGGACAGAAGATGCTGC +
Preference number: 4 (lower is better)
Translates to: MTTETLFTTRGWSKRGGMPGGRT*GDRRCC
Trigger: GCAGCATCTTCTGTCCCCTCATGTCCTTCCGCCAGG...CATCCCACCCCTCTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
CDS-3UTR GCA 90 bp CCGGCCCTCAGCATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGCGCCGGCGGATATACTaGGTCCGAAACTGTGGAAAC +
Preference number: 4 (lower is better)
Translates to: PALSMTTETLFTTRGWSKRRRIY*VRNCGN
Trigger: GTTTCCACAGTTTCGGACGCAGTATATCCGCCGGCG...CTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCATGCTGAGGGCCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
CDS-3UTR GCA 90 bp CTGGAAACTTGTGCCTGGGTCTCTCTGGGAGTTGGTCCTGCACACCATTTCTTTCGCCGGCGGATATACTaGGTCCGAAACTGTGGAAAC +
Preference number: 4 (lower is better)
Translates to: LETCAWVSLGVGPAHHFFRRRIY*VRNCGN
Trigger: GTTTCCACAGTTTCGGACGCAGTATATCCGCCGGCG...AAAGAAATGGTGTGCAGGACCAACTCCCAGAGAGACCCAGGCACAAGTTTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR GCA 90 bp AAACTTGTGCCTGGGTCTCTCTGGGAGTTGGTCCTGCACACCATTTCTTTTTGCCAGGGATCTCTCGGATaGAGCGACCATCCTCAGAGG +
Preference number: 4 (lower is better)
Translates to: KLVPGSLWELVLHTISFCQGSLG*SDHPQR
Trigger: CCTCTGAGGATGGTCGCTGCATCCGAGAGATCCCTG...GCAAAAAGAAATGGTGTGCAGGACCAACTCCCAGAGAGACCCAGGCACAAGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR GCA 90 bp AATAAACAACACAATGCACAGAAGGGTTGGGAATATCGCCCCCTGAGGAGGCAGGGAAAGAGAAGACACTaGCACGGTCATCACCCGCCC +
Preference number: 4 (lower is better)
Translates to: NKQHNAQKGWEYRPLRRQGKRRH*HGHHPP
Trigger: GGGCGGGTGATGACCGTGGCAGTGTCTTCTCTTTCC...CTGCCTCCTCAGGGGGCGATATTCCCAACCCTTCTGTGCATTGTGTTGTTTATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR GCA 90 bp CCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGAGGGGTGGGATGGAGGGGGGACAGAAGATGCTaGGCACAGGATGTGAGCTCT +
Preference number: 4 (lower is better)
Translates to: PPKLYLQHEAGVRGVGWRGDRRC*AQDVSS
Trigger: AGAGCTCACATCCTGTGCGCAGCATCTTCTGTCCCC...CCTCCATCCCACCCCTCTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
CDS-3UTR GCA 90 bp CCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGAGGGGTGGGATGGAGGGGCTGGCTTTCTCTCTaGCTGGAATGTTCTCCCCCT +
Preference number: 4 (lower is better)
Translates to: PPKLYLQHEAGVRGVGWRGWLSL*LECSPP
Trigger: AGGGGGAGAACATTCCAGGCAGAGAGAAAGCCAGCC...CCTCCATCCCACCCCTCTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR CCA 90 bp GTTAGCGAAAAAGGAGGTTCCTCAAAATTATCCTGCCATCCACAGACCTTGGTAGGGGGTGCCCAGCCTTaGCATTCTCCCGCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: VSEKGGSSKLSCHPQTLVGGAQP*HSPAAA
Trigger: AGCTGCTGCGGGAGAATGCCAAGGCTGGGCACCCCC...TACCAAGGTCTGTGGATGGCAGGATAATTTTGAGGAACCTCCTTTTTCGCTAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR CCA 90 bp GGAGCCGGCCCTCAGCATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGTTGTTGTTGACAGGCTaGAAGGTGCAGCAGAGCAGT +
Preference number: 4 (lower is better)
Translates to: GAGPQHDHRNFIYNTRLELLLTG*KVQQSS
Trigger: ACTGCTCTGCTGCACCTTCCAGCCTGTCAACAACAA...CTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCATGCTGAGGGCCGGCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
CDS-3UTR CCA 90 bp CCGGCCCTCAGCATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGGCACCACCAAACGCTTaGCTTTGGTCAGCTTCCCTG +
Preference number: 4 (lower is better)
Translates to: PALSMTTETLFTTRGWSKAPPNA*LWSASL
Trigger: CAGGGAAGCTGACCAAAGCCAAGCGTTTGGTGGTGC...CTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCATGCTGAGGGCCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
CDS-3UTR CCA 90 bp CCGGCCCTCAGCATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGAGCACAGGTGCACTGTaGCCCTGCAGCTTGTTGACA +
Preference number: 4 (lower is better)
Translates to: PALSMTTETLFTTRGWSKSTGAL*PCSLLT
Trigger: TGTCAACAAGCTGCAGGGCCACAGTGCACCTGTGCT...CTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCATGCTGAGGGCCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
CDS-3UTR CCA 90 bp AGGATCATCTTCCCTGATGCTGTCACCATAAAGAGCCCACTCCCCCAACTTCTGCCACTGTCACTACCCTaGTGCAAGTCCCCATCACTG +
Preference number: 4 (lower is better)
Translates to: RIIFPDAVTIKSPLPQLLPLSLP*CKSPSL
Trigger: CAGTGATGGGGACTTGCACCAGGGTAGTGACAGTGG...CAGAAGTTGGGGGAGTGGGCTCTTTATGGTGACAGCATCAGGGAAGATGATCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR CCA 90 bp AAACTTGTGCCTGGGTCTCTCTGGGAGTTGGTCCTGCACACCATTTCTTTTTGCGGGTGGTCTGAGGGATaGAGATTCCGCCACACAGCA +
Preference number: 4 (lower is better)
Translates to: KLVPGSLWELVLHTISFCGWSEG*RFRHTA
Trigger: TGCTGTGTGGCGGAATCTCCATCCCTCAGACCACCC...GCAAAAAGAAATGGTGTGCAGGACCAACTCCCAGAGAGACCCAGGCACAAGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR CCA 90 bp TTTAATAAACAACACAATGCACAGAAGGGTTGGGAATATCGCCCCCTGAGGAGGTGGGAGCCTGGGATTTaGGTAGGTGCCAGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: FNKQHNAQKGWEYRPLRRWEPGI*VGARQG
Trigger: CCCCTGCCTGGCACCTACCCAAATCCCAGGCTCCCA...CCTCCTCAGGGGGCGATATTCCCAACCCTTCTGTGCATTGTGTTGTTTATTAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR TCA 90 bp GGAGCCGGCCCTCAGCATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGTGCTGGTCAAAAACATaGTACATGCCCGCAAAGGCA +
Preference number: 4 (lower is better)
Translates to: GAGPQHDHRNFIYNTRLECWSKT*YMPAKA
Trigger: TGCCTTTGCGGGCATGTATCATGTTTTTGACCAGCA...CTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCATGCTGAGGGCCGGCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
CDS-3UTR TCA 90 bp AGGATCATCCTCAAAGTCCTCCATGCGGTCAAGAGTAGTGCGGCTACTGCGGACTGCTGGTCAAAAACATaGTACATGCCCGCAAAGGCA +
Preference number: 4 (lower is better)
Translates to: RIILKVLHAVKSSAATADCWSKT*YMPAKA
Trigger: TGCCTTTGCGGGCATGTATCATGTTTTTGACCAGCA...GTCCGCAGTAGCCGCACTACTCTTGACCGCATGGAGGACTTTGAGGATGATCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498631.5
CDS-3UTR TCA 90 bp AAACTTGTGCCTGGGTCTCTCTGGGAGTTGGTCCTGCACACCATTTCTTTTTGCCTTGGGAGGCTTAAGTaGGGATCACTTGAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: KLVPGSLWELVLHTISFCLGRLK*GSLEPW
Trigger: CCAGGGCTCAAGTGATCCTCACTTAAGCCTCCCAAG...GCAAAAAGAAATGGTGTGCAGGACCAACTCCCAGAGAGACCCAGGCACAAGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR GCA 90 bp ATCTTGTGTGACTCCAATGAGAGAGAAGCCCTGGAAACTTGTGCCTGGGTCTCTGGCTACTGCGGACGATaGTGTTGCTATAGGCACGAG +
Preference number: 4 (lower is better)
Translates to: ILCDSNEREALETCAWVSGYCGR*CCYRHE
Trigger: CTCGTGCCTATAGCAACAGCATCGTCCGCAGTAGCC...AGAGACCCAGGCACAAGTTTCCAGGGCTTCTCTCTCATTGGAGTCACACAAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR GCA 90 bp CCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGAGGGGTGGGATGGAGGATGACATGCACGTTGTaGTTGGCGTTCCCCACCACA +
Preference number: 4 (lower is better)
Translates to: PPKLYLQHEAGVRGVGWRMTCTL*LAFPTT
Trigger: TGTGGTGGGGAACGCCAAGCACAACGTGCATGTCAT...CCTCCATCCCACCCCTCTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
CDS-3UTR GCA 90 bp ATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGAGGGGTGGGATGACAGGGCTCCCCTCATaGACCACCAAACGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: MTTETLFTTRGWSKRGGMTGLPS*TTKRLA
Trigger: AGCCAAGCGTTTGGTGGTGCATGAGGGGAGCCCTGT...CATCCCACCCCTCTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
CDS-3UTR GCA 90 bp CCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGAGGGGTGGGATGGAGGACAGGATGTGAGCTCTaGTCGATGGGGAAGCTTCTC +
Preference number: 4 (lower is better)
Translates to: PPKLYLQHEAGVRGVGWRTGCEL*SMGKLL
Trigger: GAGAAGCTTCCCCATCGAGCAGAGCTCACATCCTGT...CCTCCATCCCACCCCTCTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
CDS-3UTR GCA 90 bp TGGTGTTGCACACTGTGCAGAAAAACAGTAACAGAGCAGGCCTCAACTGCGATCGACATCAAGCACAGGTaGACTGTGGCCCTGCAGCTT +
Preference number: 4 (lower is better)
Translates to: WCCTLCRKTVTEQASTAIDIKHR*TVALQL
Trigger: AAGCTGCAGGGCCACAGTGCACCTGTGCTTGATGTC...GATCGCAGTTGAGGCCTGCTCTGTTACTGTTTTTCTGCACAGTGTGCAACACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR GCA 90 bp TTTAATAAACAACACAATGCACAGAAGGGTTGGGAATATCGCCCCCTGAGGAGGACTTCCCGTTGCTCCTaGACCAGCTTGGGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: FNKQHNAQKGWEYRPLRRTSRCS*TSLGLQ
Trigger: CTGGAGCCCCAAGCTGGTGCAGGAGCAACGGGAAGT...CCTCCTCAGGGGGCGATATTCCCAACCCTTCTGTGCATTGTGTTGTTTATTAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR GCA 90 bp ATCTTGTGTGACTCCAATGAGAGAGAAGCCCTGGAAACTTGTGCCTGGGTCTCTTCAGCAGCTCAGCAATaGTGGGCCAAGCTGGAGTCT +
Preference number: 4 (lower is better)
Translates to: ILCDSNEREALETCAWVSSAAQQ*WAKLES
Trigger: AGACTCCAGCTTGGCCCAGCATTGCTGAGCTGCTGA...AGAGACCCAGGCACAAGTTTCCAGGGCTTCTCTCTCATTGGAGTCACACAAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR CCA 90 bp GGAGCCGGCCCTCAGCATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGAAACTGTGGAAACGTTaGTGTGCGGTACGCGTTGTA +
Preference number: 4 (lower is better)
Translates to: GAGPQHDHRNFIYNTRLEKLWKR*CAVRVV
Trigger: TACAACGCGTACCGCACACCAACGTTTCCACAGTTT...CTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCATGCTGAGGGCCGGCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
CDS-3UTR CCA 90 bp CTGGAAACTTGTGCCTGGGTCTCTCTGGGAGTTGGTCCTGCACACCATTTCTTTTGGCATCCAGTGAGGTaGACACGAGGATGTCATTGG +
Preference number: 4 (lower is better)
Translates to: LETCAWVSLGVGPAHHFFWHPVR*TRGCHW
Trigger: CCAATGACATCCTCGTGTCCACCTCACTGGATGCCA...AAAGAAATGGTGTGCAGGACCAACTCCCAGAGAGACCCAGGCACAAGTTTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR CCA 90 bp ACAAACGGGAGATTATTTCCCTCCAACAAGACTGTTGGTGCGAGTTCAGCAGCTCCCAGATGCGCATGGTaGCATCCAGTGAGGTGGACA +
Preference number: 4 (lower is better)
Translates to: TNGRLFPSNKTVGASSAAPRCAW*HPVRWT
Trigger: TGTCCACCTCACTGGATGCCACCATGCGCATCTGGG...AGCTGCTGAACTCGCACCAACAGTCTTGTTGGAGGGAAATAATCTCCCGTTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR CCA 90 bp CCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGAGGGGTGGGATGGAGGGTGAGCTCTGCTCGATaGGGAAGCTTCTCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: PPKLYLQHEAGVRGVGWRVSSAR*GSFSSA
Trigger: AGCTGAAGAGAAGCTTCCCCATCGAGCAGAGCTCAC...CCTCCATCCCACCCCTCTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
CDS-3UTR CCA 90 bp AGGATCATCTTCCCTGATGCTGTCACCATAAAGAGCCCACTCCCCCAACTTCTGGTGAGCTCTGCTCGATaGGGAAGCTTCTCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: RIIFPDAVTIKSPLPQLLVSSAR*GSFSSA
Trigger: AGCTGAAGAGAAGCTTCCCCATCGAGCAGAGCTCAC...CAGAAGTTGGGGGAGTGGGCTCTTTATGGTGACAGCATCAGGGAAGATGATCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR CCA 90 bp AATAAACAACACAATGCACAGAAGGGTTGGGAATATCGCCCCCTGAGGAGGCAGAGCACAGGTGCACTGTaGCCCTGCAGCTTGTTGACA +
Preference number: 4 (lower is better)
Translates to: NKQHNAQKGWEYRPLRRQSTGAL*PCSLLT
Trigger: TGTCAACAAGCTGCAGGGCCACAGTGCACCTGTGCT...CTGCCTCCTCAGGGGGCGATATTCCCAACCCTTCTGTGCATTGTGTTGTTTATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR TCA 90 bp ACAAACGGGAGATTATTTCCCTCCAACAAGACTGTTGGTGCGAGTTCAGCAGCTAGGTTGAGGCTGCAGTaGGCTATGGTCATGCCACTG +
Preference number: 4 (lower is better)
Translates to: TNGRLFPSNKTVGASSAARLRLQ*AMVMPL
Trigger: CAGTGGCATGACCATAGCTCACTGCAGCCTCAACCT...AGCTGCTGAACTCGCACCAACAGTCTTGTTGGAGGGAAATAATCTCCCGTTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR TCA 90 bp TTTAATAAACAACACAATGCACAGAAGGGTTGGGAATATCGCCCCCTGAGGAGGTGTTCCTCCTCTGCTTaGCACCTTCTGGTCACCCCC +
Preference number: 4 (lower is better)
Translates to: FNKQHNAQKGWEYRPLRRCSSSA*HLLVTP
Trigger: GGGGGTGACCAGAAGGTGTCAAGCAGAGGAGGAACA...CCTCCTCAGGGGGCGATATTCCCAACCCTTCTGTGCATTGTGTTGTTTATTAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR TCA 90 bp AGGATCATCTTCCCTGATGCTGTCACCATAAAGAGCCCACTCCCCCAACTTCTGGCCCCAATAAAAACTTaGTACCAGCCAGGTGCTCAC +
Preference number: 4 (lower is better)
Translates to: RIIFPDAVTIKSPLPQLLAPIKT*YQPGAH
Trigger: GTGAGCACCTGGCTGGTATCAAGTTTTTATTGGGGC...CAGAAGTTGGGGGAGTGGGCTCTTTATGGTGACAGCATCAGGGAAGATGATCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR GCA 90 bp ATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGAGGGGTGGGATGCCACCAGGCGACCATTaGCATAGACATCGAGTCCCT +
Preference number: 4 (lower is better)
Translates to: MTTETLFTTRGWSKRGGMPPGDH*HRHRVP
Trigger: AGGGACTCGATGTCTATGGCAATGGTCGCCTGGTGG...CATCCCACCCCTCTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000218056.9
CDS-3UTR GCA 90 bp ATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGAGGGGTGGGATGGTGGAAACGTTGGTGTaGGGTACGCGTTGTACCTCG +
Preference number: 4 (lower is better)
Translates to: MTTETLFTTRGWSKRGGMVETLV*GTRCTS
Trigger: CGAGGTACAACGCGTACCGCACACCAACGTTTCCAC...CATCCCACCCCTCTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
CDS-3UTR GCA 90 bp ATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGAGGGGTGGGATGTGCGGACGATGCTGTTaGTATAGGCACGAGCACTGC +
Preference number: 4 (lower is better)
Translates to: MTTETLFTTRGWSKRGGMCGRCC*YRHEHC
Trigger: GCAGTGCTCGTGCCTATAGCAACAGCATCGTCCGCA...CATCCCACCCCTCTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
CDS-3UTR GCA 90 bp GCATGGTGGCATCCAGTGAGGTGGACACGAGGATGTCATTGGAGAGGGACCAGGCAAAAACATGATACATaGCCGCAAAGGCATAGTTCT +
Preference number: 4 (lower is better)
Translates to: AWWHPVRWTRGCHWRGTRQKHDT*PQRHSS
Trigger: AGAACTATGCCTTTGCGGGCATGTATCATGTTTTTG...CCTGGTCCCTCTCCAATGACATCCTCGTGTCCACCTCACTGGATGCCACCATGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498631.5
CDS-3UTR GCA 90 bp ATCTTGTGTGACTCCAATGAGAGAGAAGCCCTGGAAACTTGTGCCTGGGTCTCTACAGGATGTGAGCTCTaGTCGATGGGGAAGCTTCTC +
Preference number: 4 (lower is better)
Translates to: ILCDSNEREALETCAWVSTGCEL*SMGKLL
Trigger: GAGAAGCTTCCCCATCGAGCAGAGCTCACATCCTGT...AGAGACCCAGGCACAAGTTTCCAGGGCTTCTCTCTCATTGGAGTCACACAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR GCA 90 bp AATAAACAACACAATGCACAGAAGGGTTGGGAATATCGCCCCCTGAGGAGGCAGGAGCAGTATCCCCAGTaGCTAGAACAGTTCCTGGCA +
Preference number: 4 (lower is better)
Translates to: NKQHNAQKGWEYRPLRRQEQYPQ*LEQFLA
Trigger: TGCCAGGAACTGTTCTAGGCACTGGGGATACTGCTC...CTGCCTCCTCAGGGGGCGATATTCCCAACCCTTCTGTGCATTGTGTTGTTTATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR GCA 90 bp GTCGCAGTTCCAGTCAACGCATATGTGGCAACAAATGGAGCTGAGAAGGAAGGGAGTGAGCTATGGTCATaGCACTGCATTCCAACCTGG +
Preference number: 4 (lower is better)
Translates to: VAVPVNAYVATNGAEKEGSELWS*HCIPTW
Trigger: CCAGGTTGGAATGCAGTGGCATGACCATAGCTCACT...CCCTTCCTTCTCAGCTCCATTTGTTGCCACATATGCGTTGACTGGAACTGCGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR GCA 90 bp CCGGCCCTCAGCATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGCAACAAGACTGTTGGTaGGAGTTCAGCAGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: PALSMTTETLFTTRGWSKQQDCW*EFSSSA
Trigger: TGCTGAGCTGCTGAACTCGCACCAACAGTCTTGTTG...CTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCATGCTGAGGGCCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR GCA 90 bp ACAAACGGGAGATTATTTCCCTCCAACAAGACTGTTGGTGCGAGTTCAGCAGCTAGCCCTGGAAACTTGTaGCTGGGTCTCTCTGGGAGT +
Preference number: 4 (lower is better)
Translates to: TNGRLFPSNKTVGASSAASPGNL*LGLSGS
Trigger: ACTCCCAGAGAGACCCAGGCACAAGTTTCCAGGGCT...AGCTGCTGAACTCGCACCAACAGTCTTGTTGGAGGGAAATAATCTCCCGTTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR GCA 90 bp AAAGGAGGTTCCTCAAAATTATCCTGCCATCCACAGACCTTGGTAGAAACTGGGCCAGGAGGTGGAGGCTaGAGTGAGCCAAGATCATGC +
Preference number: 4 (lower is better)
Translates to: KGGSSKLSCHPQTLVETGPGGGG*SEPRSC
Trigger: GCATGATCTTGGCTCACTGCAGCCTCCACCTCCTGG...CCCAGTTTCTACCAAGGTCTGTGGATGGCAGGATAATTTTGAGGAACCTCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR GCA 90 bp AAACTTGTGCCTGGGTCTCTCTGGGAGTTGGTCCTGCACACCATTTCTTTTTGCATCCTTGGAAAGGCCTaGTTCAAGGTTGGCCCTTGG +
Preference number: 4 (lower is better)
Translates to: KLVPGSLWELVLHTISFCILGKA*FKVGPW
Trigger: CCAAGGGCCAACCTTGAAGCAGGCCTTTCCAAGGAT...GCAAAAAGAAATGGTGTGCAGGACCAACTCCCAGAGAGACCCAGGCACAAGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR CCA 90 bp CCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGAGGGGTGGGATGGAGGTTTACAACACGAGGCTaGAGTAAGAGGGGTGGGATG +
Preference number: 4 (lower is better)
Translates to: PPKLYLQHEAGVRGVGWRFTTRG*SKRGGM
Trigger: CATCCCACCCCTCTTACTCCAGCCTCGTGTTGTAAA...CCTCCATCCCACCCCTCTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
CDS-3UTR CCA 90 bp CCGGCCCTCAGCATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGTTTACAACACGAGGCTaGAGTAAGAGGGGTGGGATG +
Preference number: 4 (lower is better)
Translates to: PALSMTTETLFTTRGWSKFTTRG*SKRGGM
Trigger: CATCCCACCCCTCTTACTCCAGCCTCGTGTTGTAAA...CTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCATGCTGAGGGCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
CDS-3UTR CCA 90 bp CCGGCCCTCAGCATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGTCAGTGCCTTTAGGCTaGCTTTCTCTCTGCCTGGAA +
Preference number: 4 (lower is better)
Translates to: PALSMTTETLFTTRGWSKSVPLG*LSLCLE
Trigger: TTCCAGGCAGAGAGAAAGCCAGCCTAAAGGCACTGA...CTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCATGCTGAGGGCCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR CCA 90 bp ATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGAGGGGTGGGATGCTGGAATTTGTACCCTaGATGGGGCTGGGAGGAGAC +
Preference number: 4 (lower is better)
Translates to: MTTETLFTTRGWSKRGGMLEFVP*MGLGGD
Trigger: GTCTCCTCCCAGCCCCATCCAGGGTACAAATTCCAG...CATCCCACCCCTCTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR CCA 90 bp CTGGAAACTTGTGCCTGGGTCTCTCTGGGAGTTGGTCCTGCACACCATTTCTTTCTCCAACAAGACTGTTaGTGCGAGTTCAGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: LETCAWVSLGVGPAHHFFLQQDC*CEFSSS
Trigger: TGAGCTGCTGAACTCGCACCAACAGTCTTGTTGGAG...AAAGAAATGGTGTGCAGGACCAACTCCCAGAGAGACCCAGGCACAAGTTTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376729.10
3UTR CAA 72 bp GAACAAACGGGAGATTATTTCCCTCCAACAAGACTGTaGGTGCGAGTTCAGCAGCTCAGCAATGCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: EQTGDYFPPTRL*VRVQQLSNAGP
Trigger: TGGCCCAGCATTGCTGAGCTGCTGAACTCGCACCAACAGTCTTGTTGGAGGGAAATAATCTCCCGTTTGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR TCA 90 bp CCGGCCCTCAGCATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGCTAGCATTCCTTGCTTaGCATTCTCCACCCATCTTG +
Preference number: 4 (lower is better)
Translates to: PALSMTTETLFTTRGWSKLAFLA*HSPPIL
Trigger: CAAGATGGGTGGAGAATGTCAAGCAAGGAATGCTAG...CTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCATGCTGAGGGCCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000218056.9
CDS-3UTR TCA 90 bp GTTAGCGAAAAAGGAGGTTCCTCAAAATTATCCTGCCATCCACAGACCTTGGTACATGGTGGCATCCAGTaGGGTGGACACGAGGATGTC +
Preference number: 4 (lower is better)
Translates to: VSEKGGSSKLSCHPQTLVHGGIQ*GGHEDV
Trigger: GACATCCTCGTGTCCACCTCACTGGATGCCACCATG...TACCAAGGTCTGTGGATGGCAGGATAATTTTGAGGAACCTCCTTTTTCGCTAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR TCA 90 bp GATGCTGTCACCATAAAGAGCCCACTCCCCCAACTTCTGCAGCTCTGTCTCCCATCAATGCTTGTGGAATaGATGAATCCGTCGATGCAT +
Preference number: 4 (lower is better)
Translates to: DAVTIKSPLPQLLQLCLPSMLVE*MNPSMH
Trigger: ATGCATCGACGGATTCATTCATTCCACAAGCATTGA...TGGGAGACAGAGCTGCAGAAGTTGGGGGAGTGGGCTCTTTATGGTGACAGCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR TCA 90 bp CTGGAAACTTGTGCCTGGGTCTCTCTGGGAGTTGGTCCTGCACACCATTTCTTTATGATGCAAGCCCAATaGAGGCAGGCATTTCCATCA +
Preference number: 4 (lower is better)
Translates to: LETCAWVSLGVGPAHHFFMMQAQ*RQAFPS
Trigger: TGATGGAAATGCCTGCCTTCATTGGGCTTGCATCAT...AAAGAAATGGTGTGCAGGACCAACTCCCAGAGAGACCCAGGCACAAGTTTCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR TCA 90 bp AAACTTGTGCCTGGGTCTCTCTGGGAGTTGGTCCTGCACACCATTTCTTTTTGCTCTCCCCCTACACTATaGCTCCCACTCACTTCATTC +
Preference number: 4 (lower is better)
Translates to: KLVPGSLWELVLHTISFCSPPTL*LPLTSF
Trigger: GAATGAAGTGAGTGGGAGTCATAGTGTAGGGGGAGA...GCAAAAAGAAATGGTGTGCAGGACCAACTCCCAGAGAGACCCAGGCACAAGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR GCA 90 bp CCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGAGGGGTGGGATGGAGGGAGATGTTCATGACATaGACGTTGTGCTTGGCGTTC +
Preference number: 4 (lower is better)
Translates to: PPKLYLQHEAGVRGVGWREMFMT*TLCLAF
Trigger: GAACGCCAAGCACAACGTGCATGTCATGAACATCTC...CCTCCATCCCACCCCTCTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
CDS-3UTR GCA 90 bp CCGGCCCTCAGCATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGTCCACATCAAAGAAGTaGACGCACATGTCCTCACTG +
Preference number: 4 (lower is better)
Translates to: PALSMTTETLFTTRGWSKSTSKK*THMSSL
Trigger: CAGTGAGGACATGTGCGTGCACTTCTTTGATGTGGA...CTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCATGCTGAGGGCCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
CDS-3UTR GCA 90 bp GGAGCCGGCCCTCAGCATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGCCGTCGATGCATGAATaGACAAATGAGTCAATGAAC +
Preference number: 4 (lower is better)
Translates to: GAGPQHDHRNFIYNTRLEPSMHE*TNESMN
Trigger: GTTCATTGACTCATTTGTGCATTCATGCATCGACGG...CTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCATGCTGAGGGCCGGCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR GCA 90 bp TTTAATAAACAACACAATGCACAGAAGGGTTGGGAATATCGCCCCCTGAGGAGGCACTCCCCCAACTTCTaGAGCTCTGTCTCCCATCCT +
Preference number: 4 (lower is better)
Translates to: FNKQHNAQKGWEYRPLRRHSPNF*SSVSHP
Trigger: AGGATGGGAGACAGAGCTGCAGAAGTTGGGGGAGTG...CCTCCTCAGGGGGCGATATTCCCAACCCTTCTGTGCATTGTGTTGTTTATTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR GCA 90 bp TGGTGTTGCACACTGTGCAGAAAAACAGTAACAGAGCAGGCCTCAACTGCGATCCTATGGTCATGCCACTaGATTCCAACCTGGGTGACA +
Preference number: 4 (lower is better)
Translates to: WCCTLCRKTVTEQASTAILWSCH*IPTWVT
Trigger: TGTCACCCAGGTTGGAATGCAGTGGCATGACCATAG...GATCGCAGTTGAGGCCTGCTCTGTTACTGTTTTTCTGCACAGTGTGCAACACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR GCA 90 bp GATGCTGTCACCATAAAGAGCCCACTCCCCCAACTTCTGCAGCTCTGTCTCCCAAGGACTCAACACCTCTaGTCCCTGCTTTTAATAAAC +
Preference number: 4 (lower is better)
Translates to: DAVTIKSPLPQLLQLCLPRTQHL*SLLLIN
Trigger: GTTTATTAAAAGCAGGGAGCAGAGGTGTTGAGTCCT...TGGGAGACAGAGCTGCAGAAGTTGGGGGAGTGGGCTCTTTATGGTGACAGCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR CCA 90 bp CTGGAAACTTGTGCCTGGGTCTCTCTGGGAGTTGGTCCTGCACACCATTTCTTTAAACTGTGGAAACGTTaGTGTGCGGTACGCGTTGTA +
Preference number: 4 (lower is better)
Translates to: LETCAWVSLGVGPAHHFFKLWKR*CAVRVV
Trigger: TACAACGCGTACCGCACACCAACGTTTCCACAGTTT...AAAGAAATGGTGTGCAGGACCAACTCCCAGAGAGACCCAGGCACAAGTTTCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR CCA 90 bp AAACTTGTGCCTGGGTCTCTCTGGGAGTTGGTCCTGCACACCATTTCTTTTTGCTTGTTGTTGACAGGCTaGAAGGTGCAGCAGAGCAGT +
Preference number: 4 (lower is better)
Translates to: KLVPGSLWELVLHTISFCLLLTG*KVQQSS
Trigger: ACTGCTCTGCTGCACCTTCCAGCCTGTCAACAACAA...GCAAAAAGAAATGGTGTGCAGGACCAACTCCCAGAGAGACCCAGGCACAAGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR CCA 90 bp CCGGCCCTCAGCATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGTGGTCAGCTTCCCTGTaGCCATATCAAAGAGGAAAG +
Preference number: 4 (lower is better)
Translates to: PALSMTTETLFTTRGWSKWSASL*PYQRGK
Trigger: CTTTCCTCTTTGATATGGCCACAGGGAAGCTGACCA...CTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCATGCTGAGGGCCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
CDS-3UTR CCA 90 bp GTCGCAGTTCCAGTCAACGCATATGTGGCAACAAATGGAGCTGAGAAGGAAGGGTGGTCAGCTTCCCTGTaGCCATATCAAAGAGGAAAG +
Preference number: 4 (lower is better)
Translates to: VAVPVNAYVATNGAEKEGWSASL*PYQRGK
Trigger: CTTTCCTCTTTGATATGGCCACAGGGAAGCTGACCA...CCCTTCCTTCTCAGCTCCATTTGTTGCCACATATGCGTTGACTGGAACTGCGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR CCA 90 bp AATAAACAACACAATGCACAGAAGGGTTGGGAATATCGCCCCCTGAGGAGGCAGCTGCTTGACACCTTCTaGTCACCCCCACTCAGAAAA +
Preference number: 4 (lower is better)
Translates to: NKQHNAQKGWEYRPLRRQLLDTF*SPPLRK
Trigger: TTTTCTGAGTGGGGGTGACCAGAAGGTGTCAAGCAG...CTGCCTCCTCAGGGGGCGATATTCCCAACCCTTCTGTGCATTGTGTTGTTTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR CCA 90 bp ATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGAGGGGTGGGATGAATGCACAGAAGGGTTaGGAATATCGCCCCCTGAGG +
Preference number: 4 (lower is better)
Translates to: MTTETLFTTRGWSKRGGMNAQKG*EYRPLR
Trigger: CCTCAGGGGGCGATATTCCCAACCCTTCTGTGCATT...CATCCCACCCCTCTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR CCA 90 bp ATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGAGGGGTGGGATGGAGCTGTTCCAGGGCTaGAATTTGTACCCTGGATGG +
Preference number: 4 (lower is better)
Translates to: MTTETLFTTRGWSKRGGMELFQG*NLYPGW
Trigger: CCATCCAGGGTACAAATTCCAGCCCTGGAACAGCTC...CATCCCACCCCTCTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR CCA 90 bp AAAGGAGGTTCCTCAAAATTATCCTGCCATCCACAGACCTTGGTAGAAACTGGGAATGCTGGGCCAAGCTaGAGTCTCTACCACGCTGTG +
Preference number: 4 (lower is better)
Translates to: KGGSSKLSCHPQTLVETGNAGPS*SLYHAV
Trigger: CACAGCGTGGTAGAGACTCCAGCTTGGCCCAGCATT...CCCAGTTTCTACCAAGGTCTGTGGATGGCAGGATAATTTTGAGGAACCTCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR CCA 90 bp ACCCCCAATCTGTCCCCTTCAGCAGCCAGAGGGAGCCTCTATGACCAAGTCAGACTGAGGTCTATTAGATaGAAGTGCCAGTTAGAAATG +
Preference number: 4 (lower is better)
Translates to: TPNLSPSAARGSLYDQVRLRSIR*KCQLEM
Trigger: CATTTCTAACTGGCACTTCCATCTAATAGACCTCAG...TCTGACTTGGTCATAGAGGCTCCCTCTGGCTGCTGAAGGGGACAGATTGGGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR CCA 90 bp AATAAACAACACAATGCACAGAAGGGTTGGGAATATCGCCCCCTGAGGAGGCAGATGAGAGAGAAGCCCTaGAAACTTGTGCCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: NKQHNAQKGWEYRPLRRQMREKP*KLVPGS
Trigger: AGACCCAGGCACAAGTTTCCAGGGCTTCTCTCTCAT...CTGCCTCCTCAGGGGGCGATATTCCCAACCCTTCTGTGCATTGTGTTGTTTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376729.10
3UTR CAA 72 bp GGAGGTTCCTCAAAATTATCCTGCCATCCACAGACCTaGGTAGAAACTGGGCATCTGTGTGGTGTTGCACAC +
Preference number: 4 (lower is better)
Translates to: GGSSKLSCHPQT*VETGHLCGVAH
Trigger: GTGTGCAACACCACACAGATGCCCAGTTTCTACCAAGGTCTGTGGATGGCAGGATAATTTTGAGGAACCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR TCA 90 bp ATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGAGGGGTGGGATGCTGTGGAGATGTTCATaGCATGCACGTTGTGCTTGG +
Preference number: 4 (lower is better)
Translates to: MTTETLFTTRGWSKRGGMLWRCS*HARCAW
Trigger: CCAAGCACAACGTGCATGTCATGAACATCTCCACAG...CATCCCACCCCTCTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
CDS-3UTR TCA 90 bp ATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGAGGGGTGGGATGAGCCGGCCCTCAGCATaGCCACCGAAACTTTATTTA +
Preference number: 4 (lower is better)
Translates to: MTTETLFTTRGWSKRGGMSRPSA*PPKLYL
Trigger: TAAATAAAGTTTCGGTGGTCATGCTGAGGGCCGGCT...CATCCCACCCCTCTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
CDS-3UTR TCA 90 bp CTGGAAACTTGTGCCTGGGTCTCTCTGGGAGTTGGTCCTGCACACCATTTCTTTCAGGCCACTGATAAGTaGTTTTGGTTATTTACCCCC +
Preference number: 4 (lower is better)
Translates to: LETCAWVSLGVGPAHHFFQATDK*FWLFTP
Trigger: GGGGGTAAATAACCAAAATCACTTATCAGTGGCCTG...AAAGAAATGGTGTGCAGGACCAACTCCCAGAGAGACCCAGGCACAAGTTTCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR TCA 90 bp ATCTTGTGTGACTCCAATGAGAGAGAAGCCCTGGAAACTTGTGCCTGGGTCTCTCACCACCATGTACCCTaGGGTCTATTAGATGGAAGT +
Preference number: 4 (lower is better)
Translates to: ILCDSNEREALETCAWVSHHHVP*GLLDGS
Trigger: ACTTCCATCTAATAGACCTCAGGGTACATGGTGGTG...AGAGACCCAGGCACAAGTTTCCAGGGCTTCTCTCTCATTGGAGTCACACAAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR GCA 90 bp GTTAGCGAAAAAGGAGGTTCCTCAAAATTATCCTGCCATCCACAGACCTTGGTAGGGGACAGAAGATGCTaGGCACAGGATGTGAGCTCT +
Preference number: 4 (lower is better)
Translates to: VSEKGGSSKLSCHPQTLVGDRRC*AQDVSS
Trigger: AGAGCTCACATCCTGTGCGCAGCATCTTCTGTCCCC...TACCAAGGTCTGTGGATGGCAGGATAATTTTGAGGAACCTCCTTTTTCGCTAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR GCA 90 bp ATCTTGTGTGACTCCAATGAGAGAGAAGCCCTGGAAACTTGTGCCTGGGTCTCTTCCACATCAAAGAAGTaGACGCACATGTCCTCACTG +
Preference number: 4 (lower is better)
Translates to: ILCDSNEREALETCAWVSSTSKK*THMSSL
Trigger: CAGTGAGGACATGTGCGTGCACTTCTTTGATGTGGA...AGAGACCCAGGCACAAGTTTCCAGGGCTTCTCTCTCATTGGAGTCACACAAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR CCA 90 bp AAAGGAGGTTCCTCAAAATTATCCTGCCATCCACAGACCTTGGTAGAAACTGGGCTGCGTCCGAAACTGTaGAAACGTTGGTGTGCGGTA +
Preference number: 4 (lower is better)
Translates to: KGGSSKLSCHPQTLVETGLRPKL*KRWCAV
Trigger: TACCGCACACCAACGTTTCCACAGTTTCGGACGCAG...CCCAGTTTCTACCAAGGTCTGTGGATGGCAGGATAATTTTGAGGAACCTCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR CCA 90 bp TTTAATAAACAACACAATGCACAGAAGGGTTGGGAATATCGCCCCCTGAGGAGGATTACCCGAGTGTGGTaGCACACACCTGTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: FNKQHNAQKGWEYRPLRRITRVW*HTPVVP
Trigger: TGGGACTACAGGTGTGTGCCACCACACTCGGGTAAT...CCTCCTCAGGGGGCGATATTCCCAACCCTTCTGTGCATTGTGTTGTTTATTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR CCA 90 bp CCGGCCCTCAGCATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGCAGTCAACGCATATGTaGCAACAAATGGAGCTGAGA +
Preference number: 4 (lower is better)
Translates to: PALSMTTETLFTTRGWSKQSTHM*QQMELR
Trigger: TCTCAGCTCCATTTGTTGCCACATATGCGTTGACTG...CTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCATGCTGAGGGCCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR CCA 90 bp TTTAATAAACAACACAATGCACAGAAGGGTTGGGAATATCGCCCCCTGAGGAGGAATCAGCTGGGGTCATaGTGGTGCATGTCTGTGGTC +
Preference number: 4 (lower is better)
Translates to: FNKQHNAQKGWEYRPLRRNQLGS*WCMSVV
Trigger: GACCACAGACATGCACCACCATGACCCCAGCTGATT...CCTCCTCAGGGGGCGATATTCCCAACCCTTCTGTGCATTGTGTTGTTTATTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR CCA 90 bp ATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGAGGGGTGGGATGAACTGGGCATCTGTGTaGTGTTGCACACTGTGCAGA +
Preference number: 4 (lower is better)
Translates to: MTTETLFTTRGWSKRGGMNWASV*CCTLCR
Trigger: TCTGCACAGTGTGCAACACCACACAGATGCCCAGTT...CATCCCACCCCTCTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR TCA 90 bp ACAAACGGGAGATTATTTCCCTCCAACAAGACTGTTGGTGCGAGTTCAGCAGCTAAAGGTGGTTTATGCTaGGCCCCTGCTTTCCTTTTG +
Preference number: 4 (lower is better)
Translates to: TNGRLFPSNKTVGASSAAKGGLC*APAFLL
Trigger: CAAAAGGAAAGCAGGGGCTCAGCATAAACCACCTTT...AGCTGCTGAACTCGCACCAACAGTCTTGTTGGAGGGAAATAATCTCCCGTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR GCA 90 bp ATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGAGGGGTGGGATGGAGATGTTCATGACATaGACGTTGTGCTTGGCGTTC +
Preference number: 4 (lower is better)
Translates to: MTTETLFTTRGWSKRGGMEMFMT*TLCLAF
Trigger: GAACGCCAAGCACAACGTGCATGTCATGAACATCTC...CATCCCACCCCTCTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
CDS-3UTR CCA 90 bp GTTAGCGAAAAAGGAGGTTCCTCAAAATTATCCTGCCATCCACAGACCTTGGTAACACGAGGATGTCATTaGAGAGGGACCAGGCGAAGT +
Preference number: 4 (lower is better)
Translates to: VSEKGGSSKLSCHPQTLVTRGCH*RGTRRS
Trigger: ACTTCGCCTGGTCCCTCTCCAATGACATCCTCGTGT...TACCAAGGTCTGTGGATGGCAGGATAATTTTGAGGAACCTCCTTTTTCGCTAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR CCA 90 bp ATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGAGGGGTGGGATGAAAATTACCCGAGTGTaGTGGCACACACCTGTAGTC +
Preference number: 4 (lower is better)
Translates to: MTTETLFTTRGWSKRGGMKITRV*WHTPVV
Trigger: GACTACAGGTGTGTGCCACCACACTCGGGTAATTTT...CATCCCACCCCTCTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR CCA 90 bp CCGGCCCTCAGCATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGCTTAACATCACTTTTTaGTCTCTGAGCTGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: PALSMTTETLFTTRGWSKLNITF*SLSCSR
Trigger: CCTGGAACAGCTCAGAGACCAAAAAGTGATGTTAAG...CTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCATGCTGAGGGCCGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR TCA 90 bp ATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGAGGGGTGGGATGTTTGACATTTTCTGGTaGCGCAGGCCACTGATAAGT +
Preference number: 4 (lower is better)
Translates to: MTTETLFTTRGWSKRGGMFDIFW*RRPLIS
Trigger: ACTTATCAGTGGCCTGCGTCACCAGAAAATGTCAAA...CATCCCACCCCTCTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR GCA 90 bp CCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGAGGGGTGGGATGGAGGCAAAAACATGATACATaGCCGCAAAGGCATAGTTCT +
Preference number: 4 (lower is better)
Translates to: PPKLYLQHEAGVRGVGWRQKHDT*PQRHSS
Trigger: AGAACTATGCCTTTGCGGGCATGTATCATGTTTTTG...CCTCCATCCCACCCCTCTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
CDS-3UTR GCA 90 bp ATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGAGGGGTGGGATGGCATCTGTGTGGTGTTaGACACTGTGCAGAAAAACA +
Preference number: 4 (lower is better)
Translates to: MTTETLFTTRGWSKRGGMASVWC*TLCRKT
Trigger: TGTTTTTCTGCACAGTGTGCAACACCACACAGATGC...CATCCCACCCCTCTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR GCA 90 bp AATAAACAACACAATGCACAGAAGGGTTGGGAATATCGCCCCCTGAGGAGGCAGCAAAAACATGATACATaGCCGCAAAGGCATAGTTCT +
Preference number: 4 (lower is better)
Translates to: NKQHNAQKGWEYRPLRRQQKHDT*PQRHSS
Trigger: AGAACTATGCCTTTGCGGGCATGTATCATGTTTTTG...CTGCCTCCTCAGGGGGCGATATTCCCAACCCTTCTGTGCATTGTGTTGTTTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR GCA 90 bp GTTAGCGAAAAAGGAGGTTCCTCAAAATTATCCTGCCATCCACAGACCTTGGTAATCATGTTCCTCCTCTaGTTGACACCTTCTGGTCAC +
Preference number: 4 (lower is better)
Translates to: VSEKGGSSKLSCHPQTLVIMFLL*LTPSGH
Trigger: GTGACCAGAAGGTGTCAAGCAGAGGAGGAACATGAT...TACCAAGGTCTGTGGATGGCAGGATAATTTTGAGGAACCTCCTTTTTCGCTAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR GCA 90 bp ACAAACGGGAGATTATTTCCCTCCAACAAGACTGTTGGTGCGAGTTCAGCAGCTTCCTCAAAATTATCCTaGCATCCACAGACCTTGGTA +
Preference number: 4 (lower is better)
Translates to: TNGRLFPSNKTVGASSAASSKLS*HPQTLV
Trigger: TACCAAGGTCTGTGGATGGCAGGATAATTTTGAGGA...AGCTGCTGAACTCGCACCAACAGTCTTGTTGGAGGGAAATAATCTCCCGTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR CCA 90 bp AAACTTGTGCCTGGGTCTCTCTGGGAGTTGGTCCTGCACACCATTTCTTTTTGCACACTGTCAAATAACTaGACTGAACAAACGGGAGAT +
Preference number: 4 (lower is better)
Translates to: KLVPGSLWELVLHTISFCTLSNN*TEQTGD
Trigger: ATCTCCCGTTTGTTCAGTCCAGTTATTTGACAGTGT...GCAAAAAGAAATGGTGTGCAGGACCAACTCCCAGAGAGACCCAGGCACAAGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR GCA 90 bp AAACTTGTGCCTGGGTCTCTCTGGGAGTTGGTCCTGCACACCATTTCTTTTTGCGTGAGTCAAGAAAAGTaGCACCAAGATGAGTTTAAA +
Preference number: 4 (lower is better)
Translates to: KLVPGSLWELVLHTISFCVSQEK*HQDEFK
Trigger: TTTAAACTCATCTTGGTGGCACTTTTCTTGACTCAC...GCAAAAAGAAATGGTGTGCAGGACCAACTCCCAGAGAGACCCAGGCACAAGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR GCA 90 bp ATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGAGGGGTGGGATGAAACCCCCAAAATCATaGACAACAATATTCACAATC +
Preference number: 4 (lower is better)
Translates to: MTTETLFTTRGWSKRGGMKPPKS*TTIFTI
Trigger: GATTGTGAATATTGTTGTGCATGATTTTGGGGGTTT...CATCCCACCCCTCTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS CCA 90 bp GCCCAGCAGCTGCCCCCGAAGCCTCAGGTACTGCCGACGCAGCGCTaGGGGGTGCCCAGCCTTGGCATTCTCCCGCAGCAGCTGGCTGCG +
Preference number: 5 (lower is better)
Translates to: AQQLPPKPQVLPTQR*GVPSLGILPQQLAA
Trigger: CGCAGCCAGCTGCTGCGGGAGAATGCCAAGGCTGGGCACCCCCCAGCGCTGCGTCGGCAGTACCTGAGGCTTCGGGGGCAGCTGCTGGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000218056.9
ENST00000376729.10
ENST00000466962.1
ENST00000479279.5
ENST00000486125.5
ENST00000492715.1
ENST00000498631.5
CDS GCA 90 bp TCTCCGGCGCAGCCAACTCACCGCGGGCGTGCCCGCCCCCGCTACTaGGCATGCTCACCTCCGGCATGCCCACGCAGCCGCATAAGGCAA +
Preference number: 5 (lower is better)
Translates to: SPAQPTHRGRARPRY*ACSPPACPRSRIRQ
Trigger: TTGCCTTATGCGGCTGCGTGGGCATGCCGGAGGTGAGCATGCGCAGTAGCGGGGGCGGGCACGCCCGCGGTGAGTTGGCTGCGCCGGAGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000472440.1
ENST00000479279.5
ENST00000492715.1
CDS CCA 90 bp CTAAGACTTGCTGCCACACCGCGGCCATTCCCCGGCCTCCTCCTCTaGCGTGTCCGCCCGCGGCAGCCTCCGGGGCTGCCTCCGGTTCTT +
Preference number: 5 (lower is better)
Translates to: LRLAATPRPFPGLLL*RVRPRQPPGLPPVL
Trigger: AAGAACCGGAGGCAGCCCCGGAGGCTGCCGCGGGCGGACACGCCAGAGGAGGAGGCCGGGGAATGGCCGCGGTGTGGCAGCAAGTCTTAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376729.10
ENST00000472440.1
ENST00000498631.5
CDS GCA 90 bp GCCATTCCCCGGCCTCCTCCTCTGGCGTGTCCGCCCGCGGCAGCCTaGAGGACAAGGGCCTGGAATGTGAGCGTCCCGAGCGAAGGGATC +
Preference number: 5 (lower is better)
Translates to: AIPRPPPLACPPAAA*RTRAWNVSVPSEGI
Trigger: GATCCCTTCGCTCGGGACGCTCACATTCCAGGCCCTTGTCCTGCAGGCTGCCGCGGGCGGACACGCCAGAGGAGGAGGCCGGGGAATGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218056.9
ENST00000479279.5
ENST00000486125.5
ENST00000492715.1
CDS GCA 90 bp GCGCAGCCAACTCACCGCGGGCGTGCCCGCCCCCGCTACTGCGCATaGTCACCTCCGGCATGCCCACGCAGCCGCATAAGGCAAGTTCTC +
Preference number: 5 (lower is better)
Translates to: AQPTHRGRARPRYCA*SPPACPRSRIRQVL
Trigger: GAGAACTTGCCTTATGCGGCTGCGTGGGCATGCCGGAGGTGAGCATGCGCAGTAGCGGGGGCGGGCACGCCCGCGGTGAGTTGGCTGCGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000472440.1
ENST00000479279.5
ENST00000492715.1
CDS GCA 90 bp GGCTTTGACCCCACGCCTCACCTCGCGTCCACTGCTAAGACTTGCTaGCACACCGCGGCCATTCCCCGGCCTCCTCCTCTGGCGTGTCCG +
Preference number: 5 (lower is better)
Translates to: GFDPTPHLASTAKTC*HTAAIPRPPPLACP
Trigger: CGGACACGCCAGAGGAGGAGGCCGGGGAATGGCCGCGGTGTGGCAGCAAGTCTTAGCAGTGGACGCGAGGTGAGGCGTGGGGTCAAAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000472440.1
ENST00000479279.5
ENST00000492715.1
CDS GCA 90 bp TTGCTGTTTAGAATCCTCTCCGGCGCAGCCAACTCACCGCGGGCGTaGCCGCCCCCGCTACTGCGCATGCTCACCTCCGGCATGCCCACG +
Preference number: 5 (lower is better)
Translates to: LLFRILSGAANSPRA*PPPLLRMLTSGMPT
Trigger: CGTGGGCATGCCGGAGGTGAGCATGCGCAGTAGCGGGGGCGGGCACGCCCGCGGTGAGTTGGCTGCGCCGGAGAGGATTCTAAACAGCAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000472440.1
ENST00000479279.5
ENST00000492715.1
CDS TCA 90 bp CAGCAGGGCCGACAGGACCCTACTTCTGCTCCCGCCTCCAGACGATaGCCATGCCGCTGGCGTCACTGGAGGCCAGTAGGCTCTCGTCGC +
Preference number: 5 (lower is better)
Translates to: QQGRQDPTSAPASRR*PCRWRHWRPVGSRR
Trigger: GCGACGAGAGCCTACTGGCCTCCAGTGACGCCAGCGGCATGGTCATCGTCTGGAGGCGGGAGCAGAAGTAGGGTCCTGTCGGCCCTGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218056.9
ENST00000376729.10
ENST00000479279.5
ENST00000492873.1
CDS GCA 90 bp GGTGTGCGGTACGCGTTGTACCTCGCGTCCACTGCTAAGACTTGCTaGCACACCGCGGCCATTCCCCGGCCTCCTCCTCTGGCGTGTCCG +
Preference number: 5 (lower is better)
Translates to: GVRYALYLASTAKTC*HTAAIPRPPPLACP
Trigger: CGGACACGCCAGAGGAGGAGGCCGGGGAATGGCCGCGGTGTGGCAGCAAGTCTTAGCAGTGGACGCGAGGTACAACGCGTACCGCACACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218056.9
ENST00000376729.10
ENST00000470124.1
CDS GCA 90 bp ATGGGCTTTGACCCCACGCCTCACCTCGCGTCCACTGCTAAGACTTaGTGCCACACCGCGGCCATTCCCCGGCCTCCTCCTCTGGCGTGT +
Preference number: 5 (lower is better)
Translates to: MGFDPTPHLASTAKT*CHTAAIPRPPPLAC
Trigger: ACACGCCAGAGGAGGAGGCCGGGGAATGGCCGCGGTGTGGCAGCAAGTCTTAGCAGTGGACGCGAGGTGAGGCGTGGGGTCAAAGCCCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000472440.1
ENST00000479279.5
ENST00000492715.1
CDS CCA 90 bp CTAAGACTTGCTGCCACACCGCGGCCATTCCCCGGCCTCCTCCTCTaGCGTGTCCGCCCGCGGCAGCGTGGACCACGAAAGCAAGAACAT +
Preference number: 5 (lower is better)
Translates to: LRLAATPRPFPGLLL*RVRPRQRGPRKQEH
Trigger: ATGTTCTTGCTTTCGTGGTCCACGCTGCCGCGGGCGGACACGCCAGAGGAGGAGGCCGGGGAATGGCCGCGGTGTGGCAGCAAGTCTTAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470124.1
CDS-3UTR CAA 90 bp GCCTGTCCTCATAGACGGCACGGTTCATCTGCGCCTGCAGCTGGTAGGAGCCTCCGGCCATGGCCCGACTaGCCTCTGCTGCTGACGTGG +
Preference number: 5 (lower is better)
Translates to: ACPHRRHGSSAPAAGRSLRPWPD*PLLLTW
Trigger: CCACGTCAGCAGCAGAGGCAAGTCGGGCCATGGCCG...GAGGCTCCTACCAGCTGCAGGCGCAGATGAACCGTGCCGTCTATGAGGACAGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486125.5
ENST00000498631.5
CDS GCA 90 bp GCGGATATACTGCGTCCGAAACTCGCGTCCACTGCTAAGACTTGCTaGCACACCGCGGCCATTCCCCGGCCTCCTCCTCTGGCGTGTCCG +
Preference number: 5 (lower is better)
Translates to: ADILRPKLASTAKTC*HTAAIPRPPPLACP
Trigger: CGGACACGCCAGAGGAGGAGGCCGGGGAATGGCCGCGGTGTGGCAGCAAGTCTTAGCAGTGGACGCGAGTTTCGGACGCAGTATATCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486125.5
ENST00000498631.5
CDS CCA 90 bp TGCCCGCAAAGGCATAGTTCTCGCTCAGTGACGTGTCCCCGGCCATaGCCCGACTTGCCTCTGCTGCTGACGTGGGCACCACGCTGTCCT +
Preference number: 5 (lower is better)
Translates to: CPQRHSSRSVTCPRP*PDLPLLLTWAPRCP
Trigger: AGGACAGCGTGGTGCCCACGTCAGCAGCAGAGGCAAGTCGGGCCATGGCCGGGGACACGTCACTGAGCGAGAACTATGCCTTTGCGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466962.1
ENST00000492715.1
CDS-3UTR CAA 90 bp CACGGGCCCCCAGGGCCCGAGGATCATCCTCAAAGTCCTCCATGCGGTCAAGAGTGGCGAAGCGCACCCTaGGGACTGCCTCATCCACGT +
Preference number: 5 (lower is better)
Translates to: HGPPGPEDHPQSPPCGQEWRSAP*GLPHPR
Trigger: ACGTGGATGAGGCAGTCCCAAGGGTGCGCTTCGCCA...CTCTTGACCGCATGGAGGACTTTGAGGATGATCCTCGGGCCCTGGGGGCCCGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498631.5
CDS TCA 90 bp TGTCCTCACTGCCCGTCACCACGCAGGCCCCCTGGCGGAAGGACATaGGGGGACAGAAGATGCTGCGCACAGGATGTGAGCTCTGCTCGA +
Preference number: 5 (lower is better)
Translates to: CPHCPSPRRPPGGRT*GDRRCCAQDVSSAR
Trigger: TCGAGCAGAGCTCACATCCTGTGCGCAGCATCTTCTGTCCCCTCATGTCCTTCCGCCAGGGGGCCTGCGTGGTGACGGGCAGTGAGGACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000218056.9
ENST00000376729.10
ENST00000479279.5
ENST00000482760.3
ENST00000492873.1
CDS GCA 90 bp AGCTTGTTGACAGCAGCCTTGGCCGCCCGCTCCACATCAAAGAAGTaGACGCACATGTCCTCACTGCCCGTCACCACGCAGGCCCCCTGG +
Preference number: 5 (lower is better)
Translates to: SLLTAALAARSTSKK*THMSSLPVTTQAPW
Trigger: CCAGGGGGCCTGCGTGGTGACGGGCAGTGAGGACATGTGCGTGCACTTCTTTGATGTGGAGCGGGCGGCCAAGGCTGCTGTCAACAAGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000218056.9
ENST00000376729.10
ENST00000479279.5
ENST00000492873.1
CDS CCA 90 bp CCGCAGCAGCTGGCTGCGCCGGCGGATATACTGCGTCCGAAACTGTaGAAACGTTGGTGTGCGGTACGCGTTGTACCTCGCGTCCACTGC +
Preference number: 5 (lower is better)
Translates to: PQQLAAPADILRPKL*KRWCAVRVVPRVHC
Trigger: GCAGTGGACGCGAGGTACAACGCGTACCGCACACCAACGTTTCCACAGTTTCGGACGCAGTATATCCGCCGGCGCAGCCAGCTGCTGCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218056.9
ENST00000376729.10
ENST00000470124.1
CDS CCA 90 bp GCCATTCCCCGGCCTCCTCCTCTGGCGTGTCCGCCCGCGGCAGCGTaGACCACGAAAGCAAGAACATCCACAGATTCTGGTTCATGTCCC +
Preference number: 5 (lower is better)
Translates to: AIPRPPPLACPPAAA*TTKARTSTDSGSCP
Trigger: GGGACATGAACCAGAATCTGTGGATGTTCTTGCTTTCGTGGTCCACGCTGCCGCGGGCGGACACGCCAGAGGAGGAGGCCGGGGAATGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470124.1
CDS GCA 90 bp CTCACTGTGTCCCCTGCCACCACCACCGCTGCCCACTTGTACTACTaGAGTGGCTTCCTCACGAGTTCTGCTGTTCCTGCCCTCCCCCTG +
Preference number: 5 (lower is better)
Translates to: LTVSPATTTAAHLYY*SGFLTSSAVPALPL
Trigger: CAGGGGGAGGGCAGGAACAGCAGAACTCGTGAGGAAGCCACTGCAGTAGTACAAGTGGGCAGCGGTGGTGGTGGCAGGGGACACAGTGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492715.1
CDS CCA 90 bp CCGCAGCAGCTGGCTGCGCCGGCGGATATACTGCGTCCGAAACTGTaGAAACGTTGGTGTGCGGTACGCGTTGTACCTGCAGGGTCAGGA +
Preference number: 5 (lower is better)
Translates to: PQQLAAPADILRPKL*KRWCAVRVVPAGSG
Trigger: TCCTGACCCTGCAGGTACAACGCGTACCGCACACCAACGTTTCCACAGTTTCGGACGCAGTATATCCGCCGGCGCAGCCAGCTGCTGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479279.5
ENST00000492715.1
CDS CCA 90 bp TGTGTCCCCTGCCACCACCACCGCTGCCCACTTGTACTACTGCAGTaGCTTCCTCACGAGTTCTGCTGTTCCTGCCCTCCCCCTGCTCAG +
Preference number: 5 (lower is better)
Translates to: CVPCHHHRCPLVLLQ*LPHEFCCSCPPPAQ
Trigger: CTGAGCAGGGGGAGGGCAGGAACAGCAGAACTCGTGAGGAAGCCACTGCAGTAGTACAAGTGGGCAGCGGTGGTGGTGGCAGGGGACACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492715.1
CDS-3UTR CAA 90 bp CATGATACATGCCCGCAAAGGCATAGTTCTCGCTCAGTGACGTGTCCCCGGCCACGGCCATGGCCCGACTaGCCTCTGCTGCTGACGTGG +
Preference number: 5 (lower is better)
Translates to: HDTCPQRHSSRSVTCPRPRPWPD*PLLLTW
Trigger: CCACGTCAGCAGCAGAGGCAAGTCGGGCCATGGCCG...TGGCCGGGGACACGTCACTGAGCGAGAACTATGCCTTTGCGGGCATGTATCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498631.5
CDS TCA 90 bp GCAGCGACCATCCTCAGAGGCCCAGATGCGCATGGTGGCATCCAGTaGGGTGGACACGAGGATGTCATTGGAGAGGGACCAGGCGAAGTC +
Preference number: 5 (lower is better)
Translates to: AATILRGPDAHGGIQ*GGHEDVIGEGPGEV
Trigger: GACTTCGCCTGGTCCCTCTCCAATGACATCCTCGTGTCCACCTCACTGGATGCCACCATGCGCATCTGGGCCTCTGAGGATGGTCGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218056.9
ENST00000376729.10
ENST00000479279.5
ENST00000495575.1
CDS GCA 90 bp CCCGAGCGAAGGGATCTAGTTCCGTCCCTTCCACCAGGCGACCATTaGCATAGACATCGAGTCCCTCCGCGCCGGAGATGTCACGAACTC +
Preference number: 5 (lower is better)
Translates to: PERRDLVPSLPPGDH*HRHRVPPRRRCHEL
Trigger: GAGTTCGTGACATCTCCGGCGCGGAGGGACTCGATGTCTATGGCAATGGTCGCCTGGTGGAAGGGACGGAACTAGATCCCTTCGCTCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218056.9
ENST00000479279.5
ENST00000486125.5
ENST00000492715.1
CDS GCA 90 bp GCCTTGGCATTCTCCCGCAGCAGCTGGCTGCGCCGGCGGATATACTaGGTCCGAAACTGTGGAAACGTTGGTGTGCGGTACGCGTTGTAC +
Preference number: 5 (lower is better)
Translates to: ALAFSRSSWLRRRIY*VRNCGNVGVRYALY
Trigger: GTACAACGCGTACCGCACACCAACGTTTCCACAGTTTCGGACGCAGTATATCCGCCGGCGCAGCCAGCTGCTGCGGGAGAATGCCAAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000218056.9
ENST00000376729.10
ENST00000470124.1
ENST00000479279.5
ENST00000492715.1
CDS GCA 90 bp TGCAGCAGAGCAGTTCAGCGCTATCGGGGTCAGGGATCTCTCGGATaGAGCGACCATCCTCAGAGGCCCAGATGCGCATGGTGGCATCCA +
Preference number: 5 (lower is better)
Translates to: CSRAVQRYRGQGSLG*SDHPQRPRCAWWHP
Trigger: TGGATGCCACCATGCGCATCTGGGCCTCTGAGGATGGTCGCTGCATCCGAGAGATCCCTGACCCCGATAGCGCTGAACTGCTCTGCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218056.9
ENST00000376729.10
ENST00000479279.5
ENST00000495575.1
CDS GCA 90 bp CTGACCCAGGACCGGGCTGAGATGCTGGTCACAGGGCTCCCCTCATaGACCACCAAACGCTTGGCTTTGGTCAGCTTCCCTGTGGCCATA +
Preference number: 5 (lower is better)
Translates to: LTQDRAEMLVTGLPS*TTKRLALVSFPVAI
Trigger: TATGGCCACAGGGAAGCTGACCAAAGCCAAGCGTTTGGTGGTGCATGAGGGGAGCCCTGTGACCAGCATCTCAGCCCGGTCCTGGGTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218056.9
ENST00000376729.10
ENST00000479279.5
ENST00000482760.3
CDS GCA 90 bp TGCGCCGGCGGATATACTGCGTCCGAAACTGTGGAAACGTTGGTGTaGGGTACGCGTTGTACCTGCAGGGTCAGGATGCAGGGCAGGCAG +
Preference number: 5 (lower is better)
Translates to: CAGGYTASETVETLV*GTRCTCRVRMQGRQ
Trigger: CTGCCTGCCCTGCATCCTGACCCTGCAGGTACAACGCGTACCGCACACCAACGTTTCCACAGTTTCGGACGCAGTATATCCGCCGGCGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479279.5
ENST00000492715.1
CDS CCA 90 bp AGGCTCTCGTCGCAGTTGAAGCTGACATCAAGCACAGGTGCACTGTaGCCCTGCAGCTTGTTGACAGCAGCCTTGGCCGCCCGCTCCACA +
Preference number: 5 (lower is better)
Translates to: RLSSQLKLTSSTGAL*PCSLLTAALAARST
Trigger: TGTGGAGCGGGCGGCCAAGGCTGCTGTCAACAAGCTGCAGGGCCACAGTGCACCTGTGCTTGATGTCAGCTTCAACTGCGACGAGAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218056.9
ENST00000376729.10
ENST00000479279.5
ENST00000492873.1
CDS CCA 90 bp CTGGCTGCGCCGGCGGATATACTGCGTCCGAAACTGTGGAAACGTTaGTGTGCGGTACGCGTTGTACCTGCAGGGTCAGGATGCAGGGCA +
Preference number: 5 (lower is better)
Translates to: LAAPADILRPKLWKR*CAVRVVPAGSGCRA
Trigger: TGCCCTGCATCCTGACCCTGCAGGTACAACGCGTACCGCACACCAACGTTTCCACAGTTTCGGACGCAGTATATCCGCCGGCGCAGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479279.5
ENST00000492715.1
CDS-3UTR CAA 90 bp TCAGAGGCCCAGATGCGCATGGTGGCATCCAGTGAGGTGGACACGAGGATGTCACGGTGTCGGTCATCATaGGCGAAGCGCACCCTTGGG +
Preference number: 5 (lower is better)
Translates to: SEAQMRMVASSEVDTRMSRCRSS*AKRTLG
Trigger: CCCAAGGGTGCGCTTCGCCAATGATGACCGACACCG...TGACATCCTCGTGTCCACCTCACTGGATGCCACCATGCGCATCTGGGCCTCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498631.5
CDS TCA 90 bp CTGGCGGAAGGACATGAGGGGACAGAAGATGCTGCGCACAGGATGTaGGCTCTGCTCGATGGGGAAGCTTCTCTTCAGCTGCAGGGTCCC +
Preference number: 5 (lower is better)
Translates to: LAEGHEGTEDAAHRM*ALLDGEASLQLQGP
Trigger: GGGACCCTGCAGCTGAAGAGAAGCTTCCCCATCGAGCAGAGCTCACATCCTGTGCGCAGCATCTTCTGTCCCCTCATGTCCTTCCGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000218056.9
ENST00000376729.10
ENST00000479279.5
ENST00000482760.3
ENST00000492873.1
CDS GCA 90 bp GGTCAGGGATCTCTCGGATGCAGCGACCATCCTCAGAGGCCCAGATaGGCATGGTGGCATCCAGTGAGGTGGACACGAGGATGTCATTGG +
Preference number: 5 (lower is better)
Translates to: GQGSLGCSDHPQRPR*AWWHPVRWTRGCHW
Trigger: CCAATGACATCCTCGTGTCCACCTCACTGGATGCCACCATGCGCATCTGGGCCTCTGAGGATGGTCGCTGCATCCGAGAGATCCCTGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218056.9
ENST00000376729.10
ENST00000479279.5
ENST00000495575.1
CDS CCA 90 bp GACCATCCTCAGAGGCCCAGATGCGCATGGTGGCATCCAGTGAGGTaGACACGAGGATGTCATTGGAGAGGGACCAGGCGAAGTCGGAGA +
Preference number: 5 (lower is better)
Translates to: DHPQRPRCAWWHPVR*TRGCHWRGTRRSRR
Trigger: TCTCCGACTTCGCCTGGTCCCTCTCCAATGACATCCTCGTGTCCACCTCACTGGATGCCACCATGCGCATCTGGGCCTCTGAGGATGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218056.9
ENST00000376729.10
ENST00000479279.5
ENST00000495575.1
CDS CCA 90 bp TCTCTCGGATGCAGCGACCATCCTCAGAGGCCCAGATGCGCATGGTaGCATCCAGTGAGGTGGACACGAGGATGTCATTGGAGAGGGACC +
Preference number: 5 (lower is better)
Translates to: SLGCSDHPQRPRCAW*HPVRWTRGCHWRGT
Trigger: GGTCCCTCTCCAATGACATCCTCGTGTCCACCTCACTGGATGCCACCATGCGCATCTGGGCCTCTGAGGATGGTCGCTGCATCCGAGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218056.9
ENST00000376729.10
ENST00000479279.5
ENST00000495575.1
CDS CCA 90 bp GGATCTCTCGGATGCAGCGACCATCCTCAGAGGCCCAGATGCGCATaGTGGCATCCAGTGAGGTGGACACGAGGATGTCATTGGAGAGGG +
Preference number: 5 (lower is better)
Translates to: GSLGCSDHPQRPRCA*WHPVRWTRGCHWRG
Trigger: CCCTCTCCAATGACATCCTCGTGTCCACCTCACTGGATGCCACCATGCGCATCTGGGCCTCTGAGGATGGTCGCTGCATCCGAGAGATCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218056.9
ENST00000376729.10
ENST00000479279.5
ENST00000495575.1
CDS-3UTR CAA 90 bp ACCCCCAATCTGTCCCCTTCAGCAGCCAGAGGGAGCCTCTATGACCAAGTCAGATGGCGAAGCGCACCCTaGGGACTGCCTCATCCACGT +
Preference number: 5 (lower is better)
Translates to: TPNLSPSAARGSLYDQVRWRSAP*GLPHPR
Trigger: ACGTGGATGAGGCAGTCCCAAGGGTGCGCTTCGCCA...TCTGACTTGGTCATAGAGGCTCCCTCTGGCTGCTGAAGGGGACAGATTGGGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR CAA 90 bp CGCCAACTCCTCCACTGTCACTACCCTGGTGCAAGTCCCCATCACTGCGCTCAGGACACGAGGATGTCATaGGAGAGGGACCAGGCGAAG +
Preference number: 5 (lower is better)
Translates to: RQLLHCHYPGASPHHCAQDTRMS*ERDQAK
Trigger: CTTCGCCTGGTCCCTCTCCAATGACATCCTCGTGTC...CTGAGCGCAGTGATGGGGACTTGCACCAGGGTAGTGACAGTGGAGGAGTTGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS GCA 90 bp TGGTCAGCTTCCCTGTGGCCATATCAAAGAGGAAAGAGAAGACACTaGCACGGTCATCACCCGCCCAGAGCAGCCGGCCAGGGGCATCAA +
Preference number: 5 (lower is better)
Translates to: WSASLWPYQRGKRRH*HGHHPPRAAGQGHQ
Trigger: TTGATGCCCCTGGCCGGCTGCTCTGGGCGGGTGATGACCGTGGCAGTGTCTTCTCTTTCCTCTTTGATATGGCCACAGGGAAGCTGACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218056.9
ENST00000376729.10
ENST00000479279.5
ENST00000482760.3
CDS GCA 90 bp TCGTCGCAGTTGAAGCTGACATCAAGCACAGGTGCACTGTGGCCCTaGAGCTTGTTGACAGCAGCCTTGGCCGCCCGCTCCACATCAAAG +
Preference number: 5 (lower is better)
Translates to: SSQLKLTSSTGALWP*SLLTAALAARSTSK
Trigger: CTTTGATGTGGAGCGGGCGGCCAAGGCTGCTGTCAACAAGCTGCAGGGCCACAGTGCACCTGTGCTTGATGTCAGCTTCAACTGCGACGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218056.9
ENST00000376729.10
ENST00000479279.5
ENST00000492873.1
CDS GCA 90 bp GTAGCCGCTTTGCGCATGCCCACATCTGACCACATTTTCCCAGCTTaGTGTTTAGAATCCTCTCCGGCGCAGCCAACTCACCGCGGGCGT +
Preference number: 5 (lower is better)
Translates to: VAALRMPTSDHIFPA*CLESSPAQPTHRGR
Trigger: ACGCCCGCGGTGAGTTGGCTGCGCCGGAGAGGATTCTAAACAGCAAGCTGGGAAAATGTGGTCAGATGTGGGCATGCGCAAAGCGGCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000472440.1
ENST00000479279.5
ENST00000492715.1
CDS-3UTR CAA 90 bp CCACGCTGCCAGGGGGCCTGTCCTCATAGACGGCACGGTTCATCTGCGCCTGCACCTAGCATTCCTTGCTaGACATTCTCCACCCATCTT +
Preference number: 5 (lower is better)
Translates to: PRCQGACPHRRHGSSAPAPSIPC*TFSTHL
Trigger: AAGATGGGTGGAGAATGTCAAGCAAGGAATGCTAGG...TGCAGGCGCAGATGAACCGTGCCGTCTATGAGGACAGGCCCCCTGGCAGCGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486125.5
CDS-3UTR CAA 90 bp GGAGCCGGCCCTCAGCATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGTGGCGAAGCGCACCCTaGGGACTGCCTCATCCACGT +
Preference number: 5 (lower is better)
Translates to: GAGPQHDHRNFIYNTRLEWRSAP*GLPHPR
Trigger: ACGTGGATGAGGCAGTCCCAAGGGTGCGCTTCGCCA...CTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCATGCTGAGGGCCGGCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
CDS-3UTR CAA 90 bp GGAGCCGGCCCTCAGCATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGCGGTGTCGGTCATCATaGGCGAAGCGCACCCTTGGG +
Preference number: 5 (lower is better)
Translates to: GAGPQHDHRNFIYNTRLERCRSS*AKRTLG
Trigger: CCCAAGGGTGCGCTTCGCCAATGATGACCGACACCG...CTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCATGCTGAGGGCCGGCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
CDS-3UTR CAA 90 bp GTGAGGTGGACACGAGGATGTCATTGGAGAGGGACCAGGCGAAGTCGGAGACACGACACGAGGATGTCATaGGAGAGGGACCAGGCGAAG +
Preference number: 5 (lower is better)
Translates to: VRWTRGCHWRGTRRSRRHDTRMS*ERDQAK
Trigger: CTTCGCCTGGTCCCTCTCCAATGACATCCTCGTGTC...GTGTCTCCGACTTCGCCTGGTCCCTCTCCAATGACATCCTCGTGTCCACCTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498631.5
CDS-3UTR CAA 90 bp ACCCCCAATCTGTCCCCTTCAGCAGCCAGAGGGAGCCTCTATGACCAAGTCAGACTTGAGCCTGGGAGGTaGAGGCTGCAGCGAACCATG +
Preference number: 5 (lower is better)
Translates to: TPNLSPSAARGSLYDQVRLEPGR*RLQRTM
Trigger: CATGGTTCGCTGCAGCCTCAACCTCCCAGGCTCAAG...TCTGACTTGGTCATAGAGGCTCCCTCTGGCTGCTGAAGGGGACAGATTGGGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS TCA 90 bp GAAAGTCAGTGGAGTGAATGTGTGCAGGCAGGGTATGCCCGGGGGTaGATGTGGCCAGAAGCTCACCTCCATGCGGTCAAGAGTAGTGCG +
Preference number: 5 (lower is better)
Translates to: ESQWSECVQAGYARG*MWPEAHLHAVKSSA
Trigger: CGCACTACTCTTGACCGCATGGAGGTGAGCTTCTGGCCACATTCACCCCCGGGCATACCCTGCCTGCACACATTCACTCCACTGACTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492715.1
CDS GCA 90 bp CAGCCGCATAAGGCAAGTTCTCCGCCCAGCCTCACTTATCGCCATTaGGCATGCACCACAGTAAGTTCTGCTCCCATGGGCTTTGACCCC +
Preference number: 5 (lower is better)
Translates to: QPHKASSPPSLTYRH*ACTTVSSAPMGFDP
Trigger: GGGGTCAAAGCCCATGGGAGCAGAACTTACTGTGGTGCATGCGCAATGGCGATAAGTGAGGCTGGGCGGAGAACTTGCCTTATGCGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472440.1
ENST00000479279.5
ENST00000492715.1
CDS CCA 90 bp TTGTGCTTGGCGTTCCCCACCACAGTGAGGTTGTTGTTGACAGGCTaGAAGGTGCAGCAGAGCAGTTCAGCGCTATCGGGGTCAGGGATC +
Preference number: 5 (lower is better)
Translates to: LCLAFPTTVRLLLTG*KVQQSSSALSGSGI
Trigger: GATCCCTGACCCCGATAGCGCTGAACTGCTCTGCTGCACCTTCCAGCCTGTCAACAACAACCTCACTGTGGTGGGGAACGCCAAGCACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218056.9
ENST00000376729.10
ENST00000479279.5
CDS CCA 90 bp CCGAAACTTTATTTACAACACGAGGCTGGAGTAAGAGGGGTGGGATaGAGGACAGCAGCAGGGCCGACAGGACCCTACTTCTGCTCCCGC +
Preference number: 5 (lower is better)
Translates to: PKLYLQHEAGVRGVG*RTAAGPTGPYFCSR
Trigger: GCGGGAGCAGAAGTAGGGTCCTGTCGGCCCTGCTGCTGTCCTCCATCCCACCCCTCTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218056.9
ENST00000376729.10
ENST00000479279.5
ENST00000492873.1
CDS-3UTR CAA 90 bp CCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGAGGGGTGGGATGGAGGTGGCCCTGCAGCTTGTaGACAGCAGCCTTGGCCGCC +
Preference number: 5 (lower is better)
Translates to: PPKLYLQHEAGVRGVGWRWPCSL*TAALAA
Trigger: GGCGGCCAAGGCTGCTGTCAACAAGCTGCAGGGCCA...CCTCCATCCCACCCCTCTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
CDS-3UTR CAA 90 bp ATTAGCCGAGCTTGCTGGTGCGCGCCTGTAGTTCCAGCTATTCGGGAAGCTGAGTTCCAGGGCTGGAATTaGTACCCTGGATGGGGCTGG +
Preference number: 5 (lower is better)
Translates to: ISRACWCAPVVPAIREAEFQGWN*YPGWGW
Trigger: CCAGCCCCATCCAGGGTACAAATTCCAGCCCTGGAA...CTCAGCTTCCCGAATAGCTGGAACTACAGGCGCGCACCAGCAAGCTCGGCTAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS GCA 90 bp CATAAGGCAAGTTCTCCGCCCAGCCTCACTTATCGCCATTGCGCATaGACCACAGTAAGTTCTGCTCCCATGGGCTTTGACCCCACGCCT +
Preference number: 5 (lower is better)
Translates to: HKASSPPSLTYRHCA*TTVSSAPMGFDPTP
Trigger: AGGCGTGGGGTCAAAGCCCATGGGAGCAGAACTTACTGTGGTGCATGCGCAATGGCGATAAGTGAGGCTGGGCGGAGAACTTGCCTTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000472440.1
ENST00000479279.5
ENST00000492715.1
CDS GCA 90 bp CCAGCAAAGAGCAGGTGCTTGATGAAAGTCAGTGGAGTGAATGTGTaGAGGCAGGGTATGCCCGGGGGTGAATGTGGCCAGAAGCTCACC +
Preference number: 5 (lower is better)
Translates to: PAKSRCLMKVSGVNV*RQGMPGGECGQKLT
Trigger: GGTGAGCTTCTGGCCACATTCACCCCCGGGCATACCCTGCCTGCACACATTCACTCCACTGACTTTCATCAAGCACCTGCTCTTTGCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492715.1
CDS GCA 90 bp CTGGCTCACCTGCCTCATCCACGTGCTGGTCAAAAACATGATACATaGCCGCAAAGGCATAGTTCTCGCTCAGTGACGTGTCCCCGGCCA +
Preference number: 5 (lower is better)
Translates to: LAHLPHPRAGQKHDT*PQRHSSRSVTCPRP
Trigger: TGGCCGGGGACACGTCACTGAGCGAGAACTATGCCTTTGCGGGCATGTATCATGTTTTTGACCAGCACGTGGATGAGGCAGGTGAGCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492715.1
CDS-3UTR CAA 90 bp CCGGCCCTCAGCATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGGGTGTGCGGTACGCGTaGTACCTCGCGTCCACTGCT +
Preference number: 5 (lower is better)
Translates to: PALSMTTETLFTTRGWSKGVRYA*YLASTA
Trigger: AGCAGTGGACGCGAGGTACAACGCGTACCGCACACC...CTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCATGCTGAGGGCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
CDS-3UTR CAA 90 bp ATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGAGGGGTGGGATGCGGCCATGGCCCGACTaGCCTCTGCTGCTGACGTGG +
Preference number: 5 (lower is better)
Translates to: MTTETLFTTRGWSKRGGMRPWPD*PLLLTW
Trigger: CCACGTCAGCAGCAGAGGCAAGTCGGGCCATGGCCG...CATCCCACCCCTCTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
CDS-3UTR CAA 90 bp GGAGCCGGCCCTCAGCATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGACATGCACGTTGTGCTaGGCGTTCCCCACCACAGTG +
Preference number: 5 (lower is better)
Translates to: GAGPQHDHRNFIYNTRLETCTLC*AFPTTV
Trigger: CACTGTGGTGGGGAACGCCAAGCACAACGTGCATGT...CTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCATGCTGAGGGCCGGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
CDS TCA 90 bp AAAAGGATGCCTTGGTTGGTTGTCACAGTTTGGGCAAACGCTTGGTaGTGGAACCCGCTACCCACTGGCTCACCTGCCTCATCCACGTGC +
Preference number: 5 (lower is better)
Translates to: KRMPWLVVTVWANAW*WNPLPTGSPASSTC
Trigger: GCACGTGGATGAGGCAGGTGAGCCAGTGGGTAGCGGGTTCCATCACCAAGCGTTTGCCCAAACTGTGACAACCAACCAAGGCATCCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492715.1
CDS CCA 90 bp GCCCGAGGATCATCCTCAAAGTCCTGCAAATGGAGAGGGTCAGGGTaGGTGCATCTTGCAAAAAGCCCGAGAACCTTTGAGGTGTGGAGC +
Preference number: 5 (lower is better)
Translates to: ARGSSSKSCKWRGSG*VHLAKSPRTFEVWS
Trigger: GCTCCACACCTCAAAGGTTCTCGGGCTTTTTGCAAGATGCACCCACCCTGACCCTCTCCATTTGCAGGACTTTGAGGATGATCCTCGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492715.1
CDS-3UTR CAA 90 bp TTTAATAAACAACACAATGCACAGAAGGGTTGGGAATATCGCCCCCTGAGGAGGCGGCCATGGCCCGACTaGCCTCTGCTGCTGACGTGG +
Preference number: 5 (lower is better)
Translates to: FNKQHNAQKGWEYRPLRRRPWPD*PLLLTW
Trigger: CCACGTCAGCAGCAGAGGCAAGTCGGGCCATGGCCG...CCTCCTCAGGGGGCGATATTCCCAACCCTTCTGTGCATTGTGTTGTTTATTAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR CAA 90 bp GGAGCCGGCCCTCAGCATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGTGCACCACCAAACGCTaGGCTTTGGTCAGCTTCCCT +
Preference number: 5 (lower is better)
Translates to: GAGPQHDHRNFIYNTRLECTTKR*ALVSFP
Trigger: AGGGAAGCTGACCAAAGCCAAGCGTTTGGTGGTGCA...CTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCATGCTGAGGGCCGGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
CDS-3UTR CAA 90 bp GATGCTGTCACCATAAAGAGCCCACTCCCCCAACTTCTGCAGCTCTGTCTCCCACAATGCACAGAAGGGTaGGGAATATCGCCCCCTGAG +
Preference number: 5 (lower is better)
Translates to: DAVTIKSPLPQLLQLCLPQCTEG*GISPPE
Trigger: CTCAGGGGGCGATATTCCCAACCCTTCTGTGCATTG...TGGGAGACAGAGCTGCAGAAGTTGGGGGAGTGGGCTCTTTATGGTGACAGCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR CAA 90 bp ATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGAGGGGTGGGATGAGGCCCGAGGATCGCTaGAACCCAGGAGGTGGAGGC +
Preference number: 5 (lower is better)
Translates to: MTTETLFTTRGWSKRGGMRPEDR*NPGGGG
Trigger: GCCTCCACCTCCTGGGTTCAAGCGATCCTCGGGCCT...CATCCCACCCCTCTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS GCA 90 bp GGGAGTGAGTCTGCAGTAATAATGAGCATGGTCATGAGGTCAGTTTaGAGACAACAGAGTCAGTCTGCTGCCGTGCTGGGGTCCCTACGG +
Preference number: 5 (lower is better)
Translates to: GSESAVIMSMVMRSV*RQQSQSAAVLGSLR
Trigger: CCGTAGGGACCCCAGCACGGCAGCAGACTGACTCTGTTGTCTGCAAACTGACCTCATGACCATGCTCATTATTACTGCAGACTCACTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479279.5
ENST00000492715.1
CDS GCA 90 bp GAGGATCATCCTCAAAGTCCTGCAAATGGAGAGGGTCAGGGTGGGTaGATCTTGCAAAAAGCCCGAGAACCTTTGAGGTGTGGAGCCCTG +
Preference number: 5 (lower is better)
Translates to: EDHPQSPANGEGQGG*ILQKAREPLRCGAL
Trigger: CAGGGCTCCACACCTCAAAGGTTCTCGGGCTTTTTGCAAGATGCACCCACCCTGACCCTCTCCATTTGCAGGACTTTGAGGATGATCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492715.1
CDS GCA 90 bp TTGGGCAAACGCTTGGTGATGGAACCCGCTACCCACTGGCTCACCTaGCTCATCCACGTGCTGGTCAAAAACATGATACATGCCCGCAAA +
Preference number: 5 (lower is better)
Translates to: LGKRLVMEPATHWLT*LIHVLVKNMIHARK
Trigger: TTTGCGGGCATGTATCATGTTTTTGACCAGCACGTGGATGAGGCAGGTGAGCCAGTGGGTAGCGGGTTCCATCACCAAGCGTTTGCCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492715.1
CDS-3UTR CAA 90 bp ACAAACGGGAGATTATTTCCCTCCAACAAGACTGTTGGTGCGAGTTCAGCAGCTGGTGTGCGGTACGCGTaGTACCTCGCGTCCACTGCT +
Preference number: 5 (lower is better)
Translates to: TNGRLFPSNKTVGASSAAGVRYA*YLASTA
Trigger: AGCAGTGGACGCGAGGTACAACGCGTACCGCACACC...AGCTGCTGAACTCGCACCAACAGTCTTGTTGGAGGGAAATAATCTCCCGTTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR CAA 90 bp GGAGCCGGCCCTCAGCATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGGAAACTGTGGAAACGTaGGTGTGCGGTACGCGTTGT +
Preference number: 5 (lower is better)
Translates to: GAGPQHDHRNFIYNTRLEETVET*VCGTRC
Trigger: ACAACGCGTACCGCACACCAACGTTTCCACAGTTTC...CTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCATGCTGAGGGCCGGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
CDS-3UTR CAA 90 bp CCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGAGGGGTGGGATGGAGGGACACGAGGATGTCATaGGAGAGGGACCAGGCGAAG +
Preference number: 5 (lower is better)
Translates to: PPKLYLQHEAGVRGVGWRDTRMS*ERDQAK
Trigger: CTTCGCCTGGTCCCTCTCCAATGACATCCTCGTGTC...CCTCCATCCCACCCCTCTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
CDS-3UTR CAA 90 bp GGAGCCGGCCCTCAGCATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGAGGCTCTCGTCGCAGTaGAAGCTGACATCAAGCACA +
Preference number: 5 (lower is better)
Translates to: GAGPQHDHRNFIYNTRLERLSSQ*KLTSST
Trigger: TGTGCTTGATGTCAGCTTCAACTGCGACGAGAGCCT...CTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCATGCTGAGGGCCGGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
CDS-3UTR CAA 90 bp CCGGCCCTCAGCATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGGCCCCTGCTTTCCTTTaGGGAGCCTGGGATTTGGGT +
Preference number: 5 (lower is better)
Translates to: PALSMTTETLFTTRGWSKAPAFL*GAWDLG
Trigger: ACCCAAATCCCAGGCTCCCAAAAGGAAAGCAGGGGC...CTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCATGCTGAGGGCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR CAA 90 bp CCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGAGGGGTGGGATGGAGGGTGGTCCCAGCTACTTaGGAGGATGAGGCAGCAGGA +
Preference number: 5 (lower is better)
Translates to: PPKLYLQHEAGVRGVGWRVVPAT*EDEAAG
Trigger: TCCTGCTGCCTCATCCTCCAAAGTAGCTGGGACCAC...CCTCCATCCCACCCCTCTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS TCA 90 bp GGAGCTAATTTCATGCTGCAGCTAAGCAGTTCTATAGCCCAGAGGTaGGGGGTAGAAAGCCTCAAACCCCACCAGAACCTCAGGAGGTGG +
Preference number: 5 (lower is better)
Translates to: GANFMLQLSSSIAQR*GVESLKPHQNLRRW
Trigger: CCACCTCCTGAGGTTCTGGTGGGGTTTGAGGCTTTCTACCCCTCACCTCTGGGCTATAGAACTGCTTAGCTGCAGCATGAAATTAGCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470124.1
CDS TCA 90 bp AAGGGGCGAGATGACCACACACCAGGTGGCAGGACACCTTGTTGCTaGGGAGCTAATTTCATGCTGCAGCTAAGCAGTTCTATAGCCCAG +
Preference number: 5 (lower is better)
Translates to: KGRDDHTPGGRTPCC*GANFMLQLSSSIAQ
Trigger: CTGGGCTATAGAACTGCTTAGCTGCAGCATGAAATTAGCTCCTCAGCAACAAGGTGTCCTGCCACCTGGTGTGTGGTCATCTCGCCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470124.1
CDS GCA 90 bp CCACTTGTACTACTGCAGTGGCTTCCTCACGAGTTCTGCTGTTCCTaGCCTCCCCCTGCTCAGCAGATACTAAAGACAGGGCTTGCTATA +
Preference number: 5 (lower is better)
Translates to: PLVLLQWLPHEFCCS*PPPAQQILKTGLAI
Trigger: TATAGCAAGCCCTGTCTTTAGTATCTGCTGAGCAGGGGGAGGGCAGGAACAGCAGAACTCGTGAGGAAGCCACTGCAGTAGTACAAGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492715.1
CDS-3UTR CAA 90 bp CCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGAGGGGTGGGATGGAGGCCCACCACAGTGAGGTaGTTGTTGACAGGCTGGAAG +
Preference number: 5 (lower is better)
Translates to: PPKLYLQHEAGVRGVGWRPTTVR*LLTGWK
Trigger: CTTCCAGCCTGTCAACAACAACCTCACTGTGGTGGG...CCTCCATCCCACCCCTCTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
CDS-3UTR CAA 90 bp CCGGCCCTCAGCATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGTTCATGACATGCACGTaGTGCTTGGCGTTCCCCACC +
Preference number: 5 (lower is better)
Translates to: PALSMTTETLFTTRGWSKFMTCT*CLAFPT
Trigger: GGTGGGGAACGCCAAGCACAACGTGCATGTCATGAA...CTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCATGCTGAGGGCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
CDS-3UTR CAA 90 bp GTCGCAGTTCCAGTCAACGCATATGTGGCAACAAATGGAGCTGAGAAGGAAGGGTTCATGACATGCACGTaGTGCTTGGCGTTCCCCACC +
Preference number: 5 (lower is better)
Translates to: VAVPVNAYVATNGAEKEGFMTCT*CLAFPT
Trigger: GGTGGGGAACGCCAAGCACAACGTGCATGTCATGAA...CCCTTCCTTCTCAGCTCCATTTGTTGCCACATATGCGTTGACTGGAACTGCGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR CAA 90 bp AATAAACAACACAATGCACAGAAGGGTTGGGAATATCGCCCCCTGAGGAGGCAGACCAAACGCTTGGCTTaGGTCAGCTTCCCTGTGGCC +
Preference number: 5 (lower is better)
Translates to: NKQHNAQKGWEYRPLRRQTKRLA*VSFPVA
Trigger: GGCCACAGGGAAGCTGACCAAAGCCAAGCGTTTGGT...CTGCCTCCTCAGGGGGCGATATTCCCAACCCTTCTGTGCATTGTGTTGTTTATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR CAA 90 bp ATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGAGGGGTGGGATGTTGTTGACAGCAGCCTaGGCCGCCCGCTCCACATCA +
Preference number: 5 (lower is better)
Translates to: MTTETLFTTRGWSKRGGMLLTAA*AARSTS
Trigger: TGATGTGGAGCGGGCGGCCAAGGCTGCTGTCAACAA...CATCCCACCCCTCTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
CDS-3UTR CAA 90 bp AAACTTGTGCCTGGGTCTCTCTGGGAGTTGGTCCTGCACACCATTTCTTTTTGCAGCCTTAACTTCCCGTaGCTCCTGCACCAGCTTGGG +
Preference number: 5 (lower is better)
Translates to: KLVPGSLWELVLHTISFCSLNFP*LLHQLG
Trigger: CCCAAGCTGGTGCAGGAGCAACGGGAAGTTAAGGCT...GCAAAAAGAAATGGTGTGCAGGACCAACTCCCAGAGAGACCCAGGCACAAGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR CAA 90 bp CTGGAAACTTGTGCCTGGGTCTCTCTGGGAGTTGGTCCTGCACACCATTTCTTTCCTCAACTGCGATCCTaGGAAAGGCCTGCTTCAAGG +
Preference number: 5 (lower is better)
Translates to: LETCAWVSLGVGPAHHFFPQLRS*ERPASR
Trigger: CCTTGAAGCAGGCCTTTCCAAGGATCGCAGTTGAGG...AAAGAAATGGTGTGCAGGACCAACTCCCAGAGAGACCCAGGCACAAGTTTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS GCA 90 bp ACTGCAGTGGCTTCCTCACGAGTTCTGCTGTTCCTGCCCTCCCCCTaGTCAGCAGATACTAAAGACAGGGCTTGCTATATGTTTACTGAC +
Preference number: 5 (lower is better)
Translates to: TAVASSRVLLFLPSP*SADTKDRACYMFTD
Trigger: GTCAGTAAACATATAGCAAGCCCTGTCTTTAGTATCTGCTGAGCAGGGGGAGGGCAGGAACAGCAGAACTCGTGAGGAAGCCACTGCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492715.1
CDS CCA 90 bp TGTCACAGTTTGGGCAAACGCTTGGTGATGGAACCCGCTACCCACTaGCTCACCTGCCTCATCCACGTGCTGGTCAAAAACATGATACAT +
Preference number: 5 (lower is better)
Translates to: CHSLGKRLVMEPATH*LTCLIHVLVKNMIH
Trigger: ATGTATCATGTTTTTGACCAGCACGTGGATGAGGCAGGTGAGCCAGTGGGTAGCGGGTTCCATCACCAAGCGTTTGCCCAAACTGTGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492715.1
CDS-3UTR CAA 90 bp CCGGCCCTCAGCATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGACAGTGAGGTTGTTGTaGACAGGCTGGAAGGTGCAG +
Preference number: 5 (lower is better)
Translates to: PALSMTTETLFTTRGWSKTVRLL*TGWKVQ
Trigger: CTGCACCTTCCAGCCTGTCAACAACAACCTCACTGT...CTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCATGCTGAGGGCCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
CDS-3UTR CAA 90 bp GTCGCAGTTCCAGTCAACGCATATGTGGCAACAAATGGAGCTGAGAAGGAAGGGACAGTGAGGTTGTTGTaGACAGGCTGGAAGGTGCAG +
Preference number: 5 (lower is better)
Translates to: VAVPVNAYVATNGAEKEGTVRLL*TGWKVQ
Trigger: CTGCACCTTCCAGCCTGTCAACAACAACCTCACTGT...CCCTTCCTTCTCAGCTCCATTTGTTGCCACATATGCGTTGACTGGAACTGCGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR CAA 90 bp CCGGCCCTCAGCATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGACCACAGTGAGGTTGTaGTTGACAGGCTGGAAGGTG +
Preference number: 5 (lower is better)
Translates to: PALSMTTETLFTTRGWSKTTVRL*LTGWKV
Trigger: CACCTTCCAGCCTGTCAACAACAACCTCACTGTGGT...CTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCATGCTGAGGGCCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
CDS-3UTR CAA 90 bp ATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGAGGGGTGGGATGACCAAACGCTTGGCTTaGGTCAGCTTCCCTGTGGCC +
Preference number: 5 (lower is better)
Translates to: MTTETLFTTRGWSKRGGMTKRLA*VSFPVA
Trigger: GGCCACAGGGAAGCTGACCAAAGCCAAGCGTTTGGT...CATCCCACCCCTCTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
CDS-3UTR CAA 90 bp AAAGGAGGTTCCTCAAAATTATCCTGCCATCCACAGACCTTGGTAGAAACTGGGTTGTTGACAGCAGCCTaGGCCGCCCGCTCCACATCA +
Preference number: 5 (lower is better)
Translates to: KGGSSKLSCHPQTLVETGLLTAA*AARSTS
Trigger: TGATGTGGAGCGGGCGGCCAAGGCTGCTGTCAACAA...CCCAGTTTCTACCAAGGTCTGTGGATGGCAGGATAATTTTGAGGAACCTCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR CAA 90 bp AAACTTGTGCCTGGGTCTCTCTGGGAGTTGGTCCTGCACACCATTTCTTTTTGCCCTCCAACAAGACTGTaGGTGCGAGTTCAGCAGCTC +
Preference number: 5 (lower is better)
Translates to: KLVPGSLWELVLHTISFCPPTRL*VRVQQL
Trigger: GAGCTGCTGAACTCGCACCAACAGTCTTGTTGGAGG...GCAAAAAGAAATGGTGTGCAGGACCAACTCCCAGAGAGACCCAGGCACAAGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR CAA 90 bp AATAAACAACACAATGCACAGAAGGGTTGGGAATATCGCCCCCTGAGGAGGCAGAGCAAATCACTGGGCTaGGGGCTGGTATTGAGGACC +
Preference number: 5 (lower is better)
Translates to: NKQHNAQKGWEYRPLRRQSKSLG*GLVLRT
Trigger: GGTCCTCAATACCAGCCCCAAGCCCAGTGATTTGCT...CTGCCTCCTCAGGGGGCGATATTCCCAACCCTTCTGTGCATTGTGTTGTTTATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR CAA 90 bp AAACTTGTGCCTGGGTCTCTCTGGGAGTTGGTCCTGCACACCATTTCTTTTTGCTGTAACGCCAGCACTTaGGTAGGCCAAGGTGAGAGG +
Preference number: 5 (lower is better)
Translates to: KLVPGSLWELVLHTISFCCNAST*VGQGER
Trigger: CCTCTCACCTTGGCCTACCAAAGTGCTGGCGTTACA...GCAAAAAGAAATGGTGTGCAGGACCAACTCCCAGAGAGACCCAGGCACAAGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS GCA 90 bp ATTCCTCCTTTGGAGTGTGCCAGGGGCCTTGGATTCAGAAAAGGATaGCTTGGTTGGTTGTCACAGTTTGGGCAAACGCTTGGTGATGGA +
Preference number: 5 (lower is better)
Translates to: IPPLECARGLGFRKG*LGWLSQFGQTLGDG
Trigger: TCCATCACCAAGCGTTTGCCCAAACTGTGACAACCAACCAAGGCATCCTTTTCTGAATCCAAGGCCCCTGGCACACTCCAAAGGAGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492715.1
CDS CCA 90 bp GGCTTTATGGATGGTCATTCCTCCTTTGGAGTGTGCCAGGGGCCTTaGATTCAGAAAAGGATGCCTTGGTTGGTTGTCACAGTTTGGGCA +
Preference number: 5 (lower is better)
Translates to: GFMDGHSSFGVCQGP*IQKRMPWLVVTVWA
Trigger: TGCCCAAACTGTGACAACCAACCAAGGCATCCTTTTCTGAATCCAAGGCCCCTGGCACACTCCAAAGGAGGAATGACCATCCATAAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492715.1
CDS-3UTR CAA 90 bp TTTAATAAACAACACAATGCACAGAAGGGTTGGGAATATCGCCCCCTGAGGAGGACATGCACGTTGTGCTaGGCGTTCCCCACCACAGTG +
Preference number: 5 (lower is better)
Translates to: FNKQHNAQKGWEYRPLRRTCTLC*AFPTTV
Trigger: CACTGTGGTGGGGAACGCCAAGCACAACGTGCATGT...CCTCCTCAGGGGGCGATATTCCCAACCCTTCTGTGCATTGTGTTGTTTATTAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR CAA 90 bp CCGGCCCTCAGCATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGTTGTTGAGGCAAGCATaGATGAGCAGTGAGGGATCC +
Preference number: 5 (lower is better)
Translates to: PALSMTTETLFTTRGWSKLLRQA*MSSEGS
Trigger: GGATCCCTCACTGCTCATCAATGCTTGCCTCAACAA...CTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCATGCTGAGGGCCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
CDS-3UTR CAA 90 bp CCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGAGGGGTGGGATGGAGGTTGTTGAGGCAAGCATaGATGAGCAGTGAGGGATCC +
Preference number: 5 (lower is better)
Translates to: PPKLYLQHEAGVRGVGWRLLRQA*MSSEGS
Trigger: GGATCCCTCACTGCTCATCAATGCTTGCCTCAACAA...CCTCCATCCCACCCCTCTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
CDS-3UTR CAA 90 bp CCGGCCCTCAGCATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGGGCATCTGTGTGGTGTaGCACACTGTGCAGAAAAAC +
Preference number: 5 (lower is better)
Translates to: PALSMTTETLFTTRGWSKGICVV*HTVQKN
Trigger: GTTTTTCTGCACAGTGTGCAACACCACACAGATGCC...CTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCATGCTGAGGGCCGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR CAA 90 bp ATCTTGTGTGACTCCAATGAGAGAGAAGCCCTGGAAACTTGTGCCTGGGTCTCTTGCCATCCACAGACCTaGGTAGAAACTGGGCATCTG +
Preference number: 5 (lower is better)
Translates to: ILCDSNEREALETCAWVSCHPQT*VETGHL
Trigger: CAGATGCCCAGTTTCTACCAAGGTCTGTGGATGGCA...AGAGACCCAGGCACAAGTTTCCAGGGCTTCTCTCTCATTGGAGTCACACAAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS TCA 90 bp CAGACAATAATTAGGGTCAGTATACCAGGGCGACAGAAATCAGACTaGCATTATGGGGGTCAGCGTTGGGAGGTGATGGGGTCAGAATGG +
Preference number: 5 (lower is better)
Translates to: QTIIRVSIPGRQKSD*HYGGQRWEVMGSEW
Trigger: CCATTCTGACCCCATCACCTCCCAACGCTGACCCCCATAATGTCAGTCTGATTTCTGTCGCCCTGGTATACTGACCCTAATTATTGTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479279.5
ENST00000492715.1
CDS GCA 90 bp TTTTTGTCCTCTGCTGATGCAGAACAGTGCCCAGCAAAGAGCAGGTaGTTGATGAAAGTCAGTGGAGTGAATGTGTGCAGGCAGGGTATG +
Preference number: 5 (lower is better)
Translates to: FLSSADAEQCPAKSR*LMKVSGVNVCRQGM
Trigger: CATACCCTGCCTGCACACATTCACTCCACTGACTTTCATCAAGCACCTGCTCTTTGCTGGGCACTGTTCTGCATCAGCAGAGGACAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492715.1
CDS-3UTR CAA 90 bp CCGGCCCTCAGCATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGCCTAGCATTCCTTGCTaGACATTCTCCACCCATCTT +
Preference number: 5 (lower is better)
Translates to: PALSMTTETLFTTRGWSKPSIPC*TFSTHL
Trigger: AAGATGGGTGGAGAATGTCAAGCAAGGAATGCTAGG...CTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCATGCTGAGGGCCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000218056.9
CDS-3UTR CAA 90 bp ACAAACGGGAGATTATTTCCCTCCAACAAGACTGTTGGTGCGAGTTCAGCAGCTACCACAGTGAGGTTGTaGTTGACAGGCTGGAAGGTG +
Preference number: 5 (lower is better)
Translates to: TNGRLFPSNKTVGASSAATTVRL*LTGWKV
Trigger: CACCTTCCAGCCTGTCAACAACAACCTCACTGTGGT...AGCTGCTGAACTCGCACCAACAGTCTTGTTGGAGGGAAATAATCTCCCGTTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR CAA 90 bp AAAGGAGGTTCCTCAAAATTATCCTGCCATCCACAGACCTTGGTAGAAACTGGGCCCACCACAGTGAGGTaGTTGTTGACAGGCTGGAAG +
Preference number: 5 (lower is better)
Translates to: KGGSSKLSCHPQTLVETGPTTVR*LLTGWK
Trigger: CTTCCAGCCTGTCAACAACAACCTCACTGTGGTGGG...CCCAGTTTCTACCAAGGTCTGTGGATGGCAGGATAATTTTGAGGAACCTCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR CAA 90 bp ATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGAGGGGTGGGATGAGGCTCTCGTCGCAGTaGAAGCTGACATCAAGCACA +
Preference number: 5 (lower is better)
Translates to: MTTETLFTTRGWSKRGGMRLSSQ*KLTSST
Trigger: TGTGCTTGATGTCAGCTTCAACTGCGACGAGAGCCT...CATCCCACCCCTCTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218056.9
ENST00000376729.10
CDS-3UTR CAA 90 bp GTTAGCGAAAAAGGAGGTTCCTCAAAATTATCCTGCCATCCACAGACCTTGGTAAGGCGAGTGGATCGCTaGAGCCCAGGAGTTCAAGAC +
Preference number: 5 (lower is better)
Translates to: VSEKGGSSKLSCHPQTLVRRVDR*SPGVQD
Trigger: GTCTTGAACTCCTGGGCTCAAGCGATCCACTCGCCT...TACCAAGGTCTGTGGATGGCAGGATAATTTTGAGGAACCTCCTTTTTCGCTAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR CAA 90 bp TTTAATAAACAACACAATGCACAGAAGGGTTGGGAATATCGCCCCCTGAGGAGGATGTTCCTCCTCTGCTaGACACCTTCTGGTCACCCC +
Preference number: 5 (lower is better)
Translates to: FNKQHNAQKGWEYRPLRRMFLLC*TPSGHP
Trigger: GGGGTGACCAGAAGGTGTCAAGCAGAGGAGGAACAT...CCTCCTCAGGGGGCGATATTCCCAACCCTTCTGTGCATTGTGTTGTTTATTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR CAA 90 bp ATCTTGTGTGACTCCAATGAGAGAGAAGCCCTGGAAACTTGTGCCTGGGTCTCTGGAGCAAGAGCCTCTTaGCTGCTTCAGGTAACTTTG +
Preference number: 5 (lower is better)
Translates to: ILCDSNEREALETCAWVSGARAS*LLQVTL
Trigger: CAAAGTTACCTGAAGCAGCAAAGAGGCTCTTGCTCC...AGAGACCCAGGCACAAGTTTCCAGGGCTTCTCTCTCATTGGAGTCACACAAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR CAA 90 bp CCGGCCCTCAGCATGACCACCGAAACTTTATTTACAACACGAGGCTGGAGTAAGCTGCTTCAGGTAACTTaGACATTTTCTGGTGACGCA +
Preference number: 5 (lower is better)
Translates to: PALSMTTETLFTTRGWSKLLQVT*TFSGDA
Trigger: TGCGTCACCAGAAAATGTCAAAGTTACCTGAAGCAG...CTTACTCCAGCCTCGTGTTGTAAATAAAGTTTCGGTGGTCATGCTGAGGGCCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS GCA 90 bp AGTTCCTGTCTTAGCGAACACTTTATAATCAAGGTCTTGGCAATTTaGAAAACCCTTGACACTGTAGCCCACTCTGCCCTCTGCAAGGGG +
Preference number: 5 (lower is better)
Translates to: SSCLSEHFIIKVLAI*KTLDTVAHSALCKG
Trigger: CCCCTTGCAGAGGGCAGAGTGGGCTACAGTGTCAAGGGTTTTGCAAATTGCCAAGACCTTGATTATAAAGTGTTCGCTAAGACAGGAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492715.1
CDS-3UTR CAA 90 bp AAAGGAGGTTCCTCAAAATTATCCTGCCATCCACAGACCTTGGTAGAAACTGGGTGCCCCAATAAAAACTaGATACCAGCCAGGTGCTCA +
Preference number: 5 (lower is better)
Translates to: KGGSSKLSCHPQTLVETGCPNKN*IPARCS
Trigger: TGAGCACCTGGCTGGTATCAAGTTTTTATTGGGGCA...CCCAGTTTCTACCAAGGTCTGTGGATGGCAGGATAATTTTGAGGAACCTCCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS GCA 90 bp CTGTTCCTGCCCTCCCCCTGCTCAGCAGATACTAAAGACAGGGCTTaGTATATGTTTACTGACCTGTTTACAAAGTTTGTGTGTTTACTG +
Preference number: 5 (lower is better)
Translates to: LFLPSPCSADTKDRA*YMFTDLFTKFVCLL
Trigger: CAGTAAACACACAAACTTTGTAAACAGGTCAGTAAACATATAGCAAGCCCTGTCTTTAGTATCTGCTGAGCAGGGGGAGGGCAGGAACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492715.1
CDS-3UTR CAA 90 bp AAACTTGTGCCTGGGTCTCTCTGGGAGTTGGTCCTGCACACCATTTCTTTTTGCGCACACCATTTCTTTTaGCTGATTTTGCTCCATATC +
Preference number: 5 (lower is better)
Translates to: KLVPGSLWELVLHTISFCAHHFF*LILLHI
Trigger: GATATGGAGCAAAATCAGCAAAAAGAAATGGTGTGC...GCAAAAAGAAATGGTGTGCAGGACCAACTCCCAGAGAGACCCAGGCACAAGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS-3UTR CAA 90 bp ATCTTGTGTGACTCCAATGAGAGAGAAGCCCTGGAAACTTGTGCCTGGGTCTCTTCACAATCAATCATCTaGAATCCAGACTCAATAGAC +
Preference number: 5 (lower is better)
Translates to: ILCDSNEREALETCAWVSSQSII*NPDSID
Trigger: GTCTATTGAGTCTGGATTCAAGATGATTGATTGTGA...AGAGACCCAGGCACAAGTTTCCAGGGCTTCTCTCTCATTGGAGTCACACAAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376729.10
CDS GCA 90 bp TTTACTTGGCATATTATCTTTTTGTCCTCTGCTGATGCAGAACAGTaGCCAGCAAAGAGCAGGTGCTTGATGAAAGTCAGTGGAGTGAAT +
Preference number: 5 (lower is better)
Translates to: FTWHIIFLSSADAEQ*PAKSRCLMKVSGVN
Trigger: ATTCACTCCACTGACTTTCATCAAGCACCTGCTCTTTGCTGGGCACTGTTCTGCATCAGCAGAGGACAAAAAGATAATATGCCAAGTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492715.1
CDS GCA 72 bp CAGCCAACTCACCGCGGGCGTGCCCGCCCCCGCTACTaGGCATGCTCACCTCCGGCATGCCCACGCAGCCGC +
Preference number: 6 (lower is better)
Translates to: QPTHRGRARPRY*ACSPPACPRSR
Trigger: GCGGCTGCGTGGGCATGCCGGAGGTGAGCATGCGCAGTAGCGGGGGCGGGCACGCCCGCGGTGAGTTGGCTG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000472440.1
ENST00000479279.5
ENST00000492715.1
CDS CCA 72 bp GCTGCCACACCGCGGCCATTCCCCGGCCTCCTCCTCTaGCGTGTCCGCCCGCGGCAGCCTGCAGGACAAGGG +
Preference number: 6 (lower is better)
Translates to: AATPRPFPGLLL*RVRPRQPAGQG
Trigger: CCCTTGTCCTGCAGGCTGCCGCGGGCGGACACGCCAGAGGAGGAGGCCGGGGAATGGCCGCGGTGTGGCAGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218056.9
ENST00000479279.5
ENST00000486125.5
ENST00000492715.1
CDS CCA 72 bp GCTGCCACACCGCGGCCATTCCCCGGCCTCCTCCTCTaGCGTGTCCGCCCGCGGCAGCGTGGACCACGAAAG +
Preference number: 6 (lower is better)
Translates to: AATPRPFPGLLL*RVRPRQRGPRK
Trigger: CTTTCGTGGTCCACGCTGCCGCGGGCGGACACGCCAGAGGAGGAGGCCGGGGAATGGCCGCGGTGTGGCAGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470124.1
CDS GCA 72 bp CGGCCTCCTCCTCTGGCGTGTCCGCCCGCGGCAGCCTaGAGGACAAGGGCCTGGAATGTGAGCGTCCCGAGC +
Preference number: 6 (lower is better)
Translates to: RPPPLACPPAAA*RTRAWNVSVPS
Trigger: GCTCGGGACGCTCACATTCCAGGCCCTTGTCCTGCAGGCTGCCGCGGGCGGACACGCCAGAGGAGGAGGCCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218056.9
ENST00000479279.5
ENST00000486125.5
ENST00000492715.1
CDS GCA 72 bp ACTCACCGCGGGCGTGCCCGCCCCCGCTACTGCGCATaGTCACCTCCGGCATGCCCACGCAGCCGCATAAGG +
Preference number: 6 (lower is better)
Translates to: THRGRARPRYCA*SPPACPRSRIR
Trigger: CCTTATGCGGCTGCGTGGGCATGCCGGAGGTGAGCATGCGCAGTAGCGGGGGCGGGCACGCCCGCGGTGAGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000472440.1
ENST00000479279.5
ENST00000492715.1
CDS GCA 72 bp AGAATCCTCTCCGGCGCAGCCAACTCACCGCGGGCGTaGCCGCCCCCGCTACTGCGCATGCTCACCTCCGGC +
Preference number: 6 (lower is better)
Translates to: RILSGAANSPRA*PPPLLRMLTSG
Trigger: GCCGGAGGTGAGCATGCGCAGTAGCGGGGGCGGGCACGCCCGCGGTGAGTTGGCTGCGCCGGAGAGGATTCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000472440.1
ENST00000479279.5
ENST00000492715.1
CDS CCA 72 bp CTGCCCCCGAAGCCTCAGGTACTGCCGACGCAGCGCTaGGGGGTGCCCAGCCTTGGCATTCTCCCGCAGCAG +
Preference number: 6 (lower is better)
Translates to: LPPKPQVLPTQR*GVPSLGILPQQ
Trigger: CTGCTGCGGGAGAATGCCAAGGCTGGGCACCCCCCAGCGCTGCGTCGGCAGTACCTGAGGCTTCGGGGGCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000218056.9
ENST00000376729.10
ENST00000466962.1
ENST00000479279.5
ENST00000486125.5
ENST00000492715.1
ENST00000498631.5
CDS CAA 90 bp AGGCATAGTTCTCGCTCAGTGACGTGTCCCCGGCCATGGCCCGACTaGCCTCTGCTGCTGACGTGGGCACCACGCTGCCAGGGGGCCTGG +
Preference number: 6 (lower is better)
Translates to: RHSSRSVTCPRPWPD*PLLLTWAPRCQGAW
Trigger: CCAGGCCCCCTGGCAGCGTGGTGCCCACGTCAGCAGCAGAGGCAAGTCGGGCCATGGCCGGGGACACGTCACTGAGCGAGAACTATGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495575.1
CDS TCA 72 bp CGTGTCCCCGGCCATGGCCCGACTTGCCTCTGCTGCTaGCGTGGGCACCACGCTGTCCTCATAGACGGCACG +
Preference number: 6 (lower is better)
Translates to: RVPGHGPTCLCC*RGHHAVLIDGT
Trigger: CGTGCCGTCTATGAGGACAGCGTGGTGCCCACGTCAGCAGCAGAGGCAAGTCGGGCCATGGCCGGGGACACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466962.1
ENST00000492715.1
CDS GCA 72 bp CCCACGCCTCACCTCGCGTCCACTGCTAAGACTTGCTaGCACACCGCGGCCATTCCCCGGCCTCCTCCTCTG +
Preference number: 6 (lower is better)
Translates to: PTPHLASTAKTC*HTAAIPRPPPL
Trigger: CAGAGGAGGAGGCCGGGGAATGGCCGCGGTGTGGCAGCAAGTCTTAGCAGTGGACGCGAGGTGAGGCGTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000472440.1
ENST00000479279.5
ENST00000492715.1
CDS GCA 72 bp GACCCCACGCCTCACCTCGCGTCCACTGCTAAGACTTaGTGCCACACCGCGGCCATTCCCCGGCCTCCTCCT +
Preference number: 6 (lower is better)
Translates to: DPTPHLASTAKT*CHTAAIPRPPP
Trigger: AGGAGGAGGCCGGGGAATGGCCGCGGTGTGGCAGCAAGTCTTAGCAGTGGACGCGAGGTGAGGCGTGGGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000472440.1
ENST00000479279.5
ENST00000492715.1
CDS GCA 72 bp GGTGCCCAGCCTTGGCATTCTCCCGCAGCAGCTGGCTaGGCCGGCGGATATACTGCGTCCGAAACTCGCGTC +
Preference number: 6 (lower is better)
Translates to: GAQPWHSPAAAG*AGGYTASETRV
Trigger: GACGCGAGTTTCGGACGCAGTATATCCGCCGGCGCAGCCAGCTGCTGCGGGAGAATGCCAAGGCTGGGCACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486125.5
ENST00000498631.5
CDS CAA 72 bp TCTCGCTCAGTGACGTGTCCCCGGCCATGGCCCGACTaGCCTCTGCTGCTGACGTGGGCACCACGCTGTCCT +
Preference number: 6 (lower is better)
Translates to: SRSVTCPRPWPD*PLLLTWAPRCP
Trigger: AGGACAGCGTGGTGCCCACGTCAGCAGCAGAGGCAAGTCGGGCCATGGCCGGGGACACGTCACTGAGCGAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466962.1
ENST00000492715.1
CDS TCA 72 bp TGCCCGTCACCACGCAGGCCCCCTGGCGGAAGGACATaGGGGGACAGAAGATGCTGCGCACAGGATGTGAGC +
Preference number: 6 (lower is better)
Translates to: CPSPRRPPGGRT*GDRRCCAQDVS
Trigger: GCTCACATCCTGTGCGCAGCATCTTCTGTCCCCTCATGTCCTTCCGCCAGGGGGCCTGCGTGGTGACGGGCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000218056.9
ENST00000376729.10
ENST00000479279.5
ENST00000482760.3
ENST00000492873.1
CDS TCA 72 bp CGACAGGACCCTACTTCTGCTCCCGCCTCCAGACGATaGCCATGCCGCTGGCGTCACTGGAGGCCAGTAGGC +
Preference number: 6 (lower is better)
Translates to: RQDPTSAPASRR*PCRWRHWRPVG
Trigger: GCCTACTGGCCTCCAGTGACGCCAGCGGCATGGTCATCGTCTGGAGGCGGGAGCAGAAGTAGGGTCCTGTCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218056.9
ENST00000376729.10
ENST00000479279.5
ENST00000492873.1
CDS GCA 72 bp CGGTACGCGTTGTACCTCGCGTCCACTGCTAAGACTTaGTGCCACACCGCGGCCATTCCCCGGCCTCCTCCT +
Preference number: 6 (lower is better)
Translates to: RYALYLASTAKT*CHTAAIPRPPP
Trigger: AGGAGGAGGCCGGGGAATGGCCGCGGTGTGGCAGCAAGTCTTAGCAGTGGACGCGAGGTACAACGCGTACCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218056.9
ENST00000376729.10
ENST00000470124.1
CDS GCA 72 bp CTGCGTCCGAAACTCGCGTCCACTGCTAAGACTTGCTaGCACACCGCGGCCATTCCCCGGCCTCCTCCTCTG +
Preference number: 6 (lower is better)
Translates to: LRPKLASTAKTC*HTAAIPRPPPL
Trigger: CAGAGGAGGAGGCCGGGGAATGGCCGCGGTGTGGCAGCAAGTCTTAGCAGTGGACGCGAGTTTCGGACGCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486125.5
ENST00000498631.5
CDS GCA 72 bp TACGCGTTGTACCTCGCGTCCACTGCTAAGACTTGCTaGCACACCGCGGCCATTCCCCGGCCTCCTCCTCTG +
Preference number: 6 (lower is better)
Translates to: YALYLASTAKTC*HTAAIPRPPPL
Trigger: CAGAGGAGGAGGCCGGGGAATGGCCGCGGTGTGGCAGCAAGTCTTAGCAGTGGACGCGAGGTACAACGCGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218056.9
ENST00000376729.10
ENST00000470124.1
CDS GCA 72 bp GGTGCCCAGCCTTGGCATTCTCCCGCAGCAGCTGGCTaGGCCGGCGGATATACTGCGTCCGAAACTGTGGAA +
Preference number: 6 (lower is better)
Translates to: GAQPWHSPAAAG*AGGYTASETVE
Trigger: TTCCACAGTTTCGGACGCAGTATATCCGCCGGCGCAGCCAGCTGCTGCGGGAGAATGCCAAGGCTGGGCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000218056.9
ENST00000376729.10
ENST00000466962.1
ENST00000470124.1
ENST00000479279.5
ENST00000492715.1
CDS CCA 72 bp CGGCCTCCTCCTCTGGCGTGTCCGCCCGCGGCAGCGTaGACCACGAAAGCAAGAACATCCACAGATTCTGGT +
Preference number: 6 (lower is better)
Translates to: RPPPLACPPAAA*TTKARTSTDSG
Trigger: ACCAGAATCTGTGGATGTTCTTGCTTTCGTGGTCCACGCTGCCGCGGGCGGACACGCCAGAGGAGGAGGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470124.1
CDS CAA 90 bp AGGCATAGTTCTCGCTCAGTGACGTGTCCCCGGCCATGGCCCGACTaGCCTCTGCTGCTGACGTGGGCACCACGCTGTCCTCATAGACGG +
Preference number: 6 (lower is better)
Translates to: RHSSRSVTCPRPWPD*PLLLTWAPRCPHRR
Trigger: CCGTCTATGAGGACAGCGTGGTGCCCACGTCAGCAGCAGAGGCAAGTCGGGCCATGGCCGGGGACACGTCACTGAGCGAGAACTATGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466962.1
ENST00000492715.1
CDS CAA 90 bp GCTGGCTGCGCCGGCGGATATACTGCGTCCGAAACTGTGGAAACGTaGGTGTGCGGTACGCGTTGTACCTGCAGGGTCAGGATGCAGGGC +
Preference number: 6 (lower is better)
Translates to: AGCAGGYTASETVET*VCGTRCTCRVRMQG
Trigger: GCCCTGCATCCTGACCCTGCAGGTACAACGCGTACCGCACACCAACGTTTCCACAGTTTCGGACGCAGTATATCCGCCGGCGCAGCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479279.5
ENST00000492715.1
CDS TCA 72 bp GAGCAGCAACTTGTTGAGGCAAGCATTGATGAGCAGTaGGGGATCCCGGGCCTCGCGGCTGACCCAGGACCG +
Preference number: 6 (lower is better)
Translates to: EQQLVEASIDEQ*GIPGLAADPGP
Trigger: CGGTCCTGGGTCAGCCGCGAGGCCCGGGATCCCTCACTGCTCATCAATGCTTGCCTCAACAAGTTGCTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218056.9
ENST00000376729.10
ENST00000479279.5
ENST00000482760.3
CDS GCA 72 bp GCAGTTCAGCGCTATCGGGGTCAGGGATCTCTCGGATaGAGCGACCATCCTCAGAGGCCCAGATGCGCATGG +
Preference number: 6 (lower is better)
Translates to: AVQRYRGQGSLG*SDHPQRPRCAW
Trigger: CCATGCGCATCTGGGCCTCTGAGGATGGTCGCTGCATCCGAGAGATCCCTGACCCCGATAGCGCTGAACTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218056.9
ENST00000376729.10
ENST00000479279.5
ENST00000495575.1
CDS GCA 72 bp ACAGCAGCCTTGGCCGCCCGCTCCACATCAAAGAAGTaGACGCACATGTCCTCACTGCCCGTCACCACGCAG +
Preference number: 6 (lower is better)
Translates to: TAALAARSTSKK*THMSSLPVTTQ
Trigger: CTGCGTGGTGACGGGCAGTGAGGACATGTGCGTGCACTTCTTTGATGTGGAGCGGGCGGCCAAGGCTGCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218056.9
ENST00000376729.10
ENST00000479279.5
ENST00000492873.1
CDS GCA 72 bp ATACTGCGTCCGAAACTCGCGTCCACTGCTAAGACTTaGTGCCACACCGCGGCCATTCCCCGGCCTCCTCCT +
Preference number: 6 (lower is better)
Translates to: ILRPKLASTAKT*CHTAAIPRPPP
Trigger: AGGAGGAGGCCGGGGAATGGCCGCGGTGTGGCAGCAAGTCTTAGCAGTGGACGCGAGTTTCGGACGCAGTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486125.5
ENST00000498631.5
CDS CAA 72 bp GGTGCACTGTGGCCCTGCAGCTTGTTGACAGCAGCCTaGGCCGCCCGCTCCACATCAAAGAAGTGCACGCAC +
Preference number: 6 (lower is better)
Translates to: GALWPCSLLTAA*AARSTSKKCTH
Trigger: GTGCGTGCACTTCTTTGATGTGGAGCGGGCGGCCAAGGCTGCTGTCAACAAGCTGCAGGGCCACAGTGCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218056.9
ENST00000376729.10
ENST00000479279.5
ENST00000492873.1
CDS CAA 90 bp ACCATGCCGCTGGCGTCACTGGAGGCCAGTAGGCTCTCGTCGCAGTaGAAGCTGACATCAAGCACAGGTGCACTGTGGCCCTGCAGCTTG +
Preference number: 6 (lower is better)
Translates to: TMPLASLEASRLSSQ*KLTSSTGALWPCSL
Trigger: CAAGCTGCAGGGCCACAGTGCACCTGTGCTTGATGTCAGCTTCAACTGCGACGAGAGCCTACTGGCCTCCAGTGACGCCAGCGGCATGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218056.9
ENST00000376729.10
ENST00000479279.5
ENST00000492873.1
CDS GCA 72 bp TTCTCCCGCAGCAGCTGGCTGCGCCGGCGGATATACTaGGTCCGAAACTGTGGAAACGTTGGTGTGCGGTAC +
Preference number: 6 (lower is better)
Translates to: FSRSSWLRRRIY*VRNCGNVGVRY
Trigger: GTACCGCACACCAACGTTTCCACAGTTTCGGACGCAGTATATCCGCCGGCGCAGCCAGCTGCTGCGGGAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000218056.9
ENST00000376729.10
ENST00000466962.1
ENST00000470124.1
ENST00000479279.5
ENST00000492715.1
CDS GCA 72 bp TCTCTCGGATGCAGCGACCATCCTCAGAGGCCCAGATaGGCATGGTGGCATCCAGTGAGGTGGACACGAGGA +
Preference number: 6 (lower is better)
Translates to: SLGCSDHPQRPR*AWWHPVRWTRG
Trigger: TCCTCGTGTCCACCTCACTGGATGCCACCATGCGCATCTGGGCCTCTGAGGATGGTCGCTGCATCCGAGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218056.9
ENST00000376729.10
ENST00000479279.5
ENST00000495575.1
CDS GCA 72 bp ACTGTGGAAACGTTGGTGTGCGGTACGCGTTGTACCTaGAGGGTCAGGATGCAGGGCAGGCAGCAGGCACAG +
Preference number: 6 (lower is better)
Translates to: TVETLVCGTRCT*RVRMQGRQQAQ
Trigger: CTGTGCCTGCTGCCTGCCCTGCATCCTGACCCTGCAGGTACAACGCGTACCGCACACCAACGTTTCCACAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479279.5
ENST00000492715.1
CDS CCA 72 bp CTGGCTGCGCCGGCGGATATACTGCGTCCGAAACTGTaGAAACGTTGGTGTGCGGTACGCGTTGTACCTCGC +
Preference number: 6 (lower is better)
Translates to: LAAPADILRPKL*KRWCAVRVVPR
Trigger: GCGAGGTACAACGCGTACCGCACACCAACGTTTCCACAGTTTCGGACGCAGTATATCCGCCGGCGCAGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218056.9
ENST00000376729.10
ENST00000470124.1
CDS CCA 72 bp CAGTTTGCAGACAACAGAGTCAGTCTGCTGCCGTGCTaGGGTCCCTACGGGGTGACTGGGTCAGCGCAGACA +
Preference number: 6 (lower is better)
Translates to: QFADNRVSLLPC*GPYGVTGSAQT
Trigger: TGTCTGCGCTGACCCAGTCACCCCGTAGGGACCCCAGCACGGCAGCAGACTGACTCTGTTGTCTGCAAACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479279.5
ENST00000492715.1
CDS CCA 72 bp TGCCACCACCACCGCTGCCCACTTGTACTACTGCAGTaGCTTCCTCACGAGTTCTGCTGTTCCTGCCCTCCC +
Preference number: 6 (lower is better)
Translates to: CHHHRCPLVLLQ*LPHEFCCSCPP
Trigger: GGGAGGGCAGGAACAGCAGAACTCGTGAGGAAGCCACTGCAGTAGTACAAGTGGGCAGCGGTGGTGGTGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492715.1
CDS CAA 72 bp CTGGCGTCACTGGAGGCCAGTAGGCTCTCGTCGCAGTaGAAGCTGACATCAAGCACAGGTGCACTGTGGCCC +
Preference number: 6 (lower is better)
Translates to: LASLEASRLSSQ*KLTSSTGALWP
Trigger: GGGCCACAGTGCACCTGTGCTTGATGTCAGCTTCAACTGCGACGAGAGCCTACTGGCCTCCAGTGACGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218056.9
ENST00000376729.10
ENST00000479279.5
ENST00000492873.1
CDS TCA 72 bp TGGAGTGAATGTGTGCAGGCAGGGTATGCCCGGGGGTaGATGTGGCCAGAAGCTCACCTCCATGCGGTCAAG +
Preference number: 6 (lower is better)
Translates to: WSECVQAGYARG*MWPEAHLHAVK
Trigger: CTTGACCGCATGGAGGTGAGCTTCTGGCCACATTCACCCCCGGGCATACCCTGCCTGCACACATTCACTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492715.1
CDS GCA 72 bp AGGGATCTAGTTCCGTCCCTTCCACCAGGCGACCATTaGCATAGACATCGAGTCCCTCCGCGCCGGAGATGT +
Preference number: 6 (lower is better)
Translates to: RDLVPSLPPGDH*HRHRVPPRRRC
Trigger: ACATCTCCGGCGCGGAGGGACTCGATGTCTATGGCAATGGTCGCCTGGTGGAAGGGACGGAACTAGATCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218056.9
ENST00000479279.5
ENST00000486125.5
ENST00000492715.1
CDS GCA 72 bp TCCCTGTGGCCATATCAAAGAGGAAAGAGAAGACACTaGCACGGTCATCACCCGCCCAGAGCAGCCGGCCAG +
Preference number: 6 (lower is better)
Translates to: SLWPYQRGKRRH*HGHHPPRAAGQ
Trigger: CTGGCCGGCTGCTCTGGGCGGGTGATGACCGTGGCAGTGTCTTCTCTTTCCTCTTTGATATGGCCACAGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218056.9
ENST00000376729.10
ENST00000479279.5
ENST00000482760.3
CDS CCA 72 bp CCGGCGGATATACTGCGTCCGAAACTGTGGAAACGTTaGTGTGCGGTACGCGTTGTACCTCGCGTCCACTGC +
Preference number: 6 (lower is better)
Translates to: PADILRPKLWKR*CAVRVVPRVHC
Trigger: GCAGTGGACGCGAGGTACAACGCGTACCGCACACCAACGTTTCCACAGTTTCGGACGCAGTATATCCGCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218056.9
ENST00000376729.10
ENST00000470124.1
CDS CCA 72 bp TGCAGCGACCATCCTCAGAGGCCCAGATGCGCATGGTaGCATCCAGTGAGGTGGACACGAGGATGTCATTGG +
Preference number: 6 (lower is better)
Translates to: CSDHPQRPRCAW*HPVRWTRGCHW
Trigger: CCAATGACATCCTCGTGTCCACCTCACTGGATGCCACCATGCGCATCTGGGCCTCTGAGGATGGTCGCTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218056.9
ENST00000376729.10
ENST00000479279.5
ENST00000495575.1
CDS CCA 72 bp GGATGCAGCGACCATCCTCAGAGGCCCAGATGCGCATaGTGGCATCCAGTGAGGTGGACACGAGGATGTCAT +
Preference number: 6 (lower is better)
Translates to: GCSDHPQRPRCA*WHPVRWTRGCH
Trigger: ATGACATCCTCGTGTCCACCTCACTGGATGCCACCATGCGCATCTGGGCCTCTGAGGATGGTCGCTGCATCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218056.9
ENST00000376729.10
ENST00000479279.5
ENST00000495575.1
CDS CCA 72 bp GCGTTCCCCACCACAGTGAGGTTGTTGTTGACAGGCTaGAAGGTGCAGCAGAGCAGTTCAGCGCTATCGGGG +
Preference number: 6 (lower is better)
Translates to: AFPTTVRLLLTG*KVQQSSSALSG
Trigger: CCCCGATAGCGCTGAACTGCTCTGCTGCACCTTCCAGCCTGTCAACAACAACCTCACTGTGGTGGGGAACGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218056.9
ENST00000376729.10
ENST00000479279.5
CDS CCA 72 bp TCGCAGTTGAAGCTGACATCAAGCACAGGTGCACTGTaGCCCTGCAGCTTGTTGACAGCAGCCTTGGCCGCC +
Preference number: 6 (lower is better)
Translates to: SQLKLTSSTGAL*PCSLLTAALAA
Trigger: GGCGGCCAAGGCTGCTGTCAACAAGCTGCAGGGCCACAGTGCACCTGTGCTTGATGTCAGCTTCAACTGCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218056.9
ENST00000376729.10
ENST00000479279.5
ENST00000492873.1
CDS CCA 72 bp CTGGCTGCGCCGGCGGATATACTGCGTCCGAAACTGTaGAAACGTTGGTGTGCGGTACGCGTTGTACCTGCA +
Preference number: 6 (lower is better)
Translates to: LAAPADILRPKL*KRWCAVRVVPA
Trigger: TGCAGGTACAACGCGTACCGCACACCAACGTTTCCACAGTTTCGGACGCAGTATATCCGCCGGCGCAGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479279.5
ENST00000492715.1
CDS CAA 72 bp GCCGGCGGATATACTGCGTCCGAAACTGTGGAAACGTaGGTGTGCGGTACGCGTTGTACCTCGCGTCCACTG +
Preference number: 6 (lower is better)
Translates to: AGGYTASETVET*VCGTRCTSRPL
Trigger: CAGTGGACGCGAGGTACAACGCGTACCGCACACCAACGTTTCCACAGTTTCGGACGCAGTATATCCGCCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218056.9
ENST00000376729.10
ENST00000470124.1
CDS CAA 72 bp GCCGGCGGATATACTGCGTCCGAAACTGTGGAAACGTaGGTGTGCGGTACGCGTTGTACCTGCAGGGTCAGG +
Preference number: 6 (lower is better)
Translates to: AGGYTASETVET*VCGTRCTCRVR
Trigger: CCTGACCCTGCAGGTACAACGCGTACCGCACACCAACGTTTCCACAGTTTCGGACGCAGTATATCCGCCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479279.5
ENST00000492715.1
CDS CAA 90 bp GCTGGCTGCGCCGGCGGATATACTGCGTCCGAAACTGTGGAAACGTaGGTGTGCGGTACGCGTTGTACCTCGCGTCCACTGCTAAGACTT +
Preference number: 6 (lower is better)
Translates to: AGCAGGYTASETVET*VCGTRCTSRPLLRL
Trigger: AAGTCTTAGCAGTGGACGCGAGGTACAACGCGTACCGCACACCAACGTTTCCACAGTTTCGGACGCAGTATATCCGCCGGCGCAGCCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218056.9
ENST00000376729.10
ENST00000470124.1
CDS CAA 90 bp TCAAGCACAGGTGCACTGTGGCCCTGCAGCTTGTTGACAGCAGCCTaGGCCGCCCGCTCCACATCAAAGAAGTGCACGCACATGTCCTCA +
Preference number: 6 (lower is better)
Translates to: SSTGALWPCSLLTAA*AARSTSKKCTHMSS
Trigger: TGAGGACATGTGCGTGCACTTCTTTGATGTGGAGCGGGCGGCCAAGGCTGCTGTCAACAAGCTGCAGGGCCACAGTGCACCTGTGCTTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218056.9
ENST00000376729.10
ENST00000479279.5
ENST00000492873.1
CDS CAA 90 bp TTGAAGCTGACATCAAGCACAGGTGCACTGTGGCCCTGCAGCTTGTaGACAGCAGCCTTGGCCGCCCGCTCCACATCAAAGAAGTGCACG +
Preference number: 6 (lower is better)
Translates to: LKLTSSTGALWPCSL*TAALAARSTSKKCT
Trigger: CGTGCACTTCTTTGATGTGGAGCGGGCGGCCAAGGCTGCTGTCAACAAGCTGCAGGGCCACAGTGCACCTGTGCTTGATGTCAGCTTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218056.9
ENST00000376729.10
ENST00000479279.5
ENST00000492873.1
CDS CAA 90 bp ATATACTGCGTCCGAAACTGTGGAAACGTTGGTGTGCGGTACGCGTaGTACCTGCAGGGTCAGGATGCAGGGCAGGCAGCAGGCACAGGA +
Preference number: 6 (lower is better)
Translates to: IYCVRNCGNVGVRYA*YLQGQDAGQAAGTG
Trigger: TCCTGTGCCTGCTGCCTGCCCTGCATCCTGACCCTGCAGGTACAACGCGTACCGCACACCAACGTTTCCACAGTTTCGGACGCAGTATAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479279.5
ENST00000492715.1
CDS CAA 90 bp AGATCACTTCTCACTGTGTCCCCTGCCACCACCACCGCTGCCCACTaGTACTACTGCAGTGGCTTCCTCACGAGTTCTGCTGTTCCTGCC +
Preference number: 6 (lower is better)
Translates to: RSLLTVSPATTTAAH*YYCSGFLTSSAVPA
Trigger: GGCAGGAACAGCAGAACTCGTGAGGAAGCCACTGCAGTAGTACAAGTGGGCAGCGGTGGTGGTGGCAGGGGACACAGTGAGAAGTGATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492715.1
CDS GCA 72 bp TGTGAGCTCTGCTCGATGGGGAAGCTTCTCTTCAGCTaGAGGGTCCCCTCGTTGTCTACCACCCTGAGAGGA +
Preference number: 6 (lower is better)
Translates to: CELCSMGKLLFS*RVPSLSTTLRG
Trigger: TCCTCTCAGGGTGGTAGACAACGAGGGGACCCTGCAGCTGAAGAGAAGCTTCCCCATCGAGCAGAGCTCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492873.1
CDS CCA 72 bp AGAAGATGCTGCGCACAGGATGTGAGCTCTGCTCGATaGGGAAGCTTCTCTTCAGCTGCAGGGTCCCCTCGT +
Preference number: 6 (lower is better)
Translates to: RRCCAQDVSSAR*GSFSSAAGSPR
Trigger: ACGAGGGGACCCTGCAGCTGAAGAGAAGCTTCCCCATCGAGCAGAGCTCACATCCTGTGCGCAGCATCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000218056.9
ENST00000376729.10
ENST00000479279.5
ENST00000482760.3
ENST00000492873.1
CDS CCA 72 bp CCGGCGGATATACTGCGTCCGAAACTGTGGAAACGTTaGTGTGCGGTACGCGTTGTACCTGCAGGGTCAGGA +
Preference number: 6 (lower is better)
Translates to: PADILRPKLWKR*CAVRVVPAGSG
Trigger: TCCTGACCCTGCAGGTACAACGCGTACCGCACACCAACGTTTCCACAGTTTCGGACGCAGTATATCCGCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479279.5
ENST00000492715.1
CDS CCA 72 bp TGGAGCCTGACCACAGTGAGGTTGTTGTTGACAGGCTaGAAGGTGCAGCAGAGCAGTTCAGCGCTATCGGGG +
Preference number: 6 (lower is better)
Translates to: WSLTTVRLLLTG*KVQQSSSALSG
Trigger: CCCCGATAGCGCTGAACTGCTCTGCTGCACCTTCCAGCCTGTCAACAACAACCTCACTGTGGTCAGGCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495575.1
CDS TCA 72 bp GGACATGAGGGGACAGAAGATGCTGCGCACAGGATGTaGGCTCTGCTCGATGGGGAAGCTTCTCTTCAGCTG +
Preference number: 6 (lower is better)
Translates to: GHEGTEDAAHRM*ALLDGEASLQL
Trigger: CAGCTGAAGAGAAGCTTCCCCATCGAGCAGAGCTCACATCCTGTGCGCAGCATCTTCTGTCCCCTCATGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000218056.9
ENST00000376729.10
ENST00000479279.5
ENST00000482760.3
ENST00000492873.1
CDS TCA 72 bp CCTTGGTTGGTTGTCACAGTTTGGGCAAACGCTTGGTaGTGGAACCCGCTACCCACTGGCTCACCTGCCTCA +
Preference number: 6 (lower is better)
Translates to: PWLVVTVWANAW*WNPLPTGSPAS
Trigger: TGAGGCAGGTGAGCCAGTGGGTAGCGGGTTCCATCACCAAGCGTTTGCCCAAACTGTGACAACCAACCAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492715.1
CDS GCA 72 bp GCTCTCGTCGCAGTTGAAGCTGACATCAAGCACAGGTaGACTGTGGCCCTGCAGCTTGTTGACAGCAGCCTT +
Preference number: 6 (lower is better)
Translates to: ALVAVEADIKHR*TVALQLVDSSL
Trigger: AAGGCTGCTGTCAACAAGCTGCAGGGCCACAGTGCACCTGTGCTTGATGTCAGCTTCAACTGCGACGAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218056.9
ENST00000376729.10
ENST00000479279.5
ENST00000492873.1
CDS GCA 72 bp AAGGCAAGTTCTCCGCCCAGCCTCACTTATCGCCATTaGGCATGCACCACAGTAAGTTCTGCTCCCATGGGC +
Preference number: 6 (lower is better)
Translates to: KASSPPSLTYRH*ACTTVSSAPMG
Trigger: GCCCATGGGAGCAGAACTTACTGTGGTGCATGCGCAATGGCGATAAGTGAGGCTGGGCGGAGAACTTGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472440.1
ENST00000479279.5
ENST00000492715.1
CDS CCA 72 bp CCCAGGGCCCGAGGATCATCCTCAAAGTCCTGCAAATaGAGAGGGTCAGGGTGGGTGCATCTTGCAAAAAGC +
Preference number: 6 (lower is better)
Translates to: PRARGSSSKSCK*RGSGWVHLAKS
Trigger: GCTTTTTGCAAGATGCACCCACCCTGACCCTCTCCATTTGCAGGACTTTGAGGATGATCCTCGGGCCCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492715.1
CDS CCA 72 bp TTGGGCAAACGCTTGGTGATGGAACCCGCTACCCACTaGCTCACCTGCCTCATCCACGTGCTGGTCAAAAAC +
Preference number: 6 (lower is better)
Translates to: LGKRLVMEPATH*LTCLIHVLVKN
Trigger: GTTTTTGACCAGCACGTGGATGAGGCAGGTGAGCCAGTGGGTAGCGGGTTCCATCACCAAGCGTTTGCCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492715.1
CDS CAA 72 bp TTGTGCTTGGCGTTCCCCACCACAGTGAGGTTGTTGTaGACAGGCTGGAAGGTGCAGCAGAGCAGTTCAGCG +
Preference number: 6 (lower is better)
Translates to: LCLAFPTTVRLL*TGWKVQQSSSA
Trigger: CGCTGAACTGCTCTGCTGCACCTTCCAGCCTGTCAACAACAACCTCACTGTGGTGGGGAACGCCAAGCACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218056.9
ENST00000376729.10
ENST00000479279.5
CDS CAA 72 bp TTGCCTGTGGAGATGTTCATGACATGCACGTTGTGCTaGGCGTTCCCCACCCTTGGTGAGTGGGTGTCCTGG +
Preference number: 6 (lower is better)
Translates to: LPVEMFMTCTLC*AFPTLGEWVSW
Trigger: CCAGGACACCCACTCACCAAGGGTGGGGAACGCCAAGCACAACGTGCATGTCATGAACATCTCCACAGGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482760.3
CDS CAA 72 bp GATGCCTTGGTTGGTTGTCACAGTTTGGGCAAACGCTaGGTGATGGAACCCGCTACCCACTGGCTCACCTGC +
Preference number: 6 (lower is better)
Translates to: DALVGCHSLGKR*VMEPATHWLTC
Trigger: GCAGGTGAGCCAGTGGGTAGCGGGTTCCATCACCAAGCGTTTGCCCAAACTGTGACAACCAACCAAGGCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492715.1
CDS CAA 90 bp GGGGCCTTGGATTCAGAAAAGGATGCCTTGGTTGGTTGTCACAGTTaGGGCAAACGCTTGGTGATGGAACCCGCTACCCACTGGCTCACC +
Preference number: 6 (lower is better)
Translates to: GALDSEKDALVGCHS*GKRLVMEPATHWLT
Trigger: GGTGAGCCAGTGGGTAGCGGGTTCCATCACCAAGCGTTTGCCCAAACTGTGACAACCAACCAAGGCATCCTTTTCTGAATCCAAGGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492715.1
CDS GCA 72 bp TTCTTGCCTGTGGAGATGTTCATGACATGCACGTTGTaGTTGGCGTTCCCCACCCTTGGTGAGTGGGTGTCC +
Preference number: 6 (lower is better)
Translates to: FLPVEMFMTCTL*LAFPTLGEWVS
Trigger: GGACACCCACTCACCAAGGGTGGGGAACGCCAAGCACAACGTGCATGTCATGAACATCTCCACAGGCAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482760.3
CDS GCA 72 bp GGATATACTGCGTCCGAAACTGTGGAAACGTTGGTGTaGGGTACGCGTTGTACCTGCAGGGTCAGGATGCAG +
Preference number: 6 (lower is better)
Translates to: GYTASETVETLV*GTRCTCRVRMQ
Trigger: CTGCATCCTGACCCTGCAGGTACAACGCGTACCGCACACCAACGTTTCCACAGTTTCGGACGCAGTATATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479279.5
ENST00000492715.1
CDS CAA 90 bp TCAGAAAAGGATGCCTTGGTTGGTTGTCACAGTTTGGGCAAACGCTaGGTGATGGAACCCGCTACCCACTGGCTCACCTGCCTCATCCAC +
Preference number: 6 (lower is better)
Translates to: SEKDALVGCHSLGKR*VMEPATHWLTCLIH
Trigger: GTGGATGAGGCAGGTGAGCCAGTGGGTAGCGGGTTCCATCACCAAGCGTTTGCCCAAACTGTGACAACCAACCAAGGCATCCTTTTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492715.1
CDS CAA 90 bp GAGTGTGCCAGGGGCCTTGGATTCAGAAAAGGATGCCTTGGTTGGTaGTCACAGTTTGGGCAAACGCTTGGTGATGGAACCCGCTACCCA +
Preference number: 6 (lower is better)
Translates to: ECARGLGFRKGCLGW*SQFGQTLGDGTRYP
Trigger: TGGGTAGCGGGTTCCATCACCAAGCGTTTGCCCAAACTGTGACAACCAACCAAGGCATCCTTTTCTGAATCCAAGGCCCCTGGCACACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492715.1
CDS GCA 72 bp GGATATACTGCGTCCGAAACTGTGGAAACGTTGGTGTaGGGTACGCGTTGTACCTCGCGTCCACTGCTAAGA +
Preference number: 6 (lower is better)
Translates to: GYTASETVETLV*GTRCTSRPLLR
Trigger: TCTTAGCAGTGGACGCGAGGTACAACGCGTACCGCACACCAACGTTTCCACAGTTTCGGACGCAGTATATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218056.9
ENST00000376729.10
ENST00000470124.1
CDS GCA 72 bp CCCTTCACTTTCTTGCCTGTGGAGATGTTCATGACATaGACGTTGTGCTTGGCGTTCCCCACCACAGTGAGG +
Preference number: 6 (lower is better)
Translates to: PFTFLPVEMFMT*TLCLAFPTTVR
Trigger: CCTCACTGTGGTGGGGAACGCCAAGCACAACGTGCATGTCATGAACATCTCCACAGGCAAGAAAGTGAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218056.9
ENST00000376729.10
ENST00000479279.5
CDS GCA 72 bp TTGCGCATGCCCACATCTGACCACATTTTCCCAGCTTaGTGTTTAGAATCCTCTCCGGCGCAGCCAACTCAC +
Preference number: 6 (lower is better)
Translates to: LRMPTSDHIFPA*CLESSPAQPTH
Trigger: GTGAGTTGGCTGCGCCGGAGAGGATTCTAAACAGCAAGCTGGGAAAATGTGGTCAGATGTGGGCATGCGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000472440.1
ENST00000479279.5
ENST00000492715.1
CDS GCA 72 bp CCCTTCACTTTCTTGCCTGTGGAGATGTTCATGACATaGACGTTGTGCTTGGCGTTCCCCACCCTTGGTGAG +
Preference number: 6 (lower is better)
Translates to: PFTFLPVEMFMT*TLCLAFPTLGE
Trigger: CTCACCAAGGGTGGGGAACGCCAAGCACAACGTGCATGTCATGAACATCTCCACAGGCAAGAAAGTGAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482760.3
CDS GCA 72 bp GCTTCCTCACGAGTTCTGCTGTTCCTGCCCTCCCCCTaGTCAGCAGATACTAAAGACAGGGCTTGCTATATG +
Preference number: 6 (lower is better)
Translates to: ASSRVLLFLPSP*SADTKDRACYM
Trigger: CATATAGCAAGCCCTGTCTTTAGTATCTGCTGAGCAGGGGGAGGGCAGGAACAGCAGAACTCGTGAGGAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492715.1
CDS CAA 72 bp ACTTTCTTGCCTGTGGAGATGTTCATGACATGCACGTaGTGCTTGGCGTTCCCCACCCTTGGTGAGTGGGTG +
Preference number: 6 (lower is better)
Translates to: TFLPVEMFMTCT*CLAFPTLGEWV
Trigger: CACCCACTCACCAAGGGTGGGGAACGCCAAGCACAACGTGCATGTCATGAACATCTCCACAGGCAAGAAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482760.3
CDS TCA 72 bp TTCATGCTGCAGCTAAGCAGTTCTATAGCCCAGAGGTaGGGGGTAGAAAGCCTCAAACCCCACCAGAACCTC +
Preference number: 6 (lower is better)
Translates to: FMLQLSSSIAQR*GVESLKPHQNL
Trigger: GAGGTTCTGGTGGGGTTTGAGGCTTTCTACCCCTCACCTCTGGGCTATAGAACTGCTTAGCTGCAGCATGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470124.1
CDS TCA 72 bp ATTAGGGTCAGTATACCAGGGCGACAGAAATCAGACTaGCATTATGGGGGTCAGCGTTGGGAGGTGATGGGG +
Preference number: 6 (lower is better)
Translates to: IRVSIPGRQKSD*HYGGQRWEVMG
Trigger: CCCCATCACCTCCCAACGCTGACCCCCATAATGTCAGTCTGATTTCTGTCGCCCTGGTATACTGACCCTAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000479279.5
ENST00000492715.1
CDS GCA 72 bp CCTCAAAGTCCTGCAAATGGAGAGGGTCAGGGTGGGTaGATCTTGCAAAAAGCCCGAGAACCTTTGAGGTGT +
Preference number: 6 (lower is better)
Translates to: PQSPANGEGQGG*ILQKAREPLRC
Trigger: ACACCTCAAAGGTTCTCGGGCTTTTTGCAAGATGCACCCACCCTGACCCTCTCCATTTGCAGGACTTTGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492715.1
CDS CCA 72 bp CAGTATACCAGGGCGACAGAAATCAGACTGACATTATaGGGGTCAGCGTTGGGAGGTGATGGGGTCAGAATG +
Preference number: 6 (lower is better)
Translates to: QYTRATEIRLTL*GSALGGDGVRM
Trigger: CATTCTGACCCCATCACCTCCCAACGCTGACCCCCATAATGTCAGTCTGATTTCTGTCGCCCTGGTATACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479279.5
ENST00000492715.1
CDS CCA 72 bp GCCAGGGGCCTTGGATTCAGAAAAGGATGCCTTGGTTaGTTGTCACAGTTTGGGCAAACGCTTGGTGATGGA +
Preference number: 6 (lower is better)
Translates to: ARGLGFRKGCLG*LSQFGQTLGDG
Trigger: TCCATCACCAAGCGTTTGCCCAAACTGTGACAACCAACCAAGGCATCCTTTTCTGAATCCAAGGCCCCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492715.1
CDS CAA 72 bp GCTGATGCAGAACAGTGCCCAGCAAAGAGCAGGTGCTaGATGAAAGTCAGTGGAGTGAATGTGTGCAGGCAG +
Preference number: 6 (lower is better)
Translates to: ADAEQCPAKSRC*MKVSGVNVCRQ
Trigger: CTGCCTGCACACATTCACTCCACTGACTTTCATCAAGCACCTGCTCTTTGCTGGGCACTGTTCTGCATCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492715.1
CDS CAA 72 bp AGTGTGCCAGGGGCCTTGGATTCAGAAAAGGATGCCTaGGTTGGTTGTCACAGTTTGGGCAAACGCTTGGTG +
Preference number: 6 (lower is better)
Translates to: SVPGALDSEKDA*VGCHSLGKRLV
Trigger: CACCAAGCGTTTGCCCAAACTGTGACAACCAACCAAGGCATCCTTTTCTGAATCCAAGGCCCCTGGCACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492715.1
CDS GCA 72 bp TTCTTGCCTGTGGAGATGTTCATGACATGCACGTTGTaGTTGGCGTTCCCCACCACAGTGAGGTTGTTGTTG +
Preference number: 6 (lower is better)
Translates to: FLPVEMFMTCTL*LAFPTTVRLLL
Trigger: CAACAACAACCTCACTGTGGTGGGGAACGCCAAGCACAACGTGCATGTCATGAACATCTCCACAGGCAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218056.9
ENST00000376729.10
ENST00000479279.5
CDS GCA 72 bp TCTGCAGTAATAATGAGCATGGTCATGAGGTCAGTTTaGAGACAACAGAGTCAGTCTGCTGCCGTGCTGGGG +
Preference number: 6 (lower is better)
Translates to: SAVIMSMVMRSV*RQQSQSAAVLG
Trigger: CCCCAGCACGGCAGCAGACTGACTCTGTTGTCTGCAAACTGACCTCATGACCATGCTCATTATTACTGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479279.5
ENST00000492715.1
CDS CCA 72 bp GATGGTCATTCCTCCTTTGGAGTGTGCCAGGGGCCTTaGATTCAGAAAAGGATGCCTTGGTTGGTTGTCACA +
Preference number: 6 (lower is better)
Translates to: DGHSSFGVCQGP*IQKRMPWLVVT
Trigger: TGTGACAACCAACCAAGGCATCCTTTTCTGAATCCAAGGCCCCTGGCACACTCCAAAGGAGGAATGACCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492715.1
CDS CAA 72 bp TTGCCTGTGGAGATGTTCATGACATGCACGTTGTGCTaGGCGTTCCCCACCACAGTGAGGTTGTTGTTGACA +
Preference number: 6 (lower is better)
Translates to: LPVEMFMTCTLC*AFPTTVRLLLT
Trigger: TGTCAACAACAACCTCACTGTGGTGGGGAACGCCAAGCACAACGTGCATGTCATGAACATCTCCACAGGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218056.9
ENST00000376729.10
ENST00000479279.5
CDS CAA 72 bp ACTTTCTTGCCTGTGGAGATGTTCATGACATGCACGTaGTGCTTGGCGTTCCCCACCACAGTGAGGTTGTTG +
Preference number: 6 (lower is better)
Translates to: TFLPVEMFMTCT*CLAFPTTVRLL
Trigger: CAACAACCTCACTGTGGTGGGGAACGCCAAGCACAACGTGCATGTCATGAACATCTCCACAGGCAAGAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218056.9
ENST00000376729.10
ENST00000479279.5
CDS CAA 72 bp GATTCAGAAAAGGATGCCTTGGTTGGTTGTCACAGTTaGGGCAAACGCTTGGTGATGGAACCCGCTACCCAC +
Preference number: 6 (lower is better)
Translates to: DSEKDALVGCHS*GKRLVMEPATH
Trigger: GTGGGTAGCGGGTTCCATCACCAAGCGTTTGCCCAAACTGTGACAACCAACCAAGGCATCCTTTTCTGAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492715.1
CDS CAA 72 bp AGGGGCCTTGGATTCAGAAAAGGATGCCTTGGTTGGTaGTCACAGTTTGGGCAAACGCTTGGTGATGGAACC +
Preference number: 6 (lower is better)
Translates to: RGLGFRKGCLGW*SQFGQTLGDGT
Trigger: GGTTCCATCACCAAGCGTTTGCCCAAACTGTGACAACCAACCAAGGCATCCTTTTCTGAATCCAAGGCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492715.1
CDS TCA 72 bp CTTTATAATCAAGGTCTTGGCAATTTGCAAAACCCTTaGCACTGTAGCCCACTCTGCCCTCTGCAAGGGGAT +
Preference number: 6 (lower is better)
Translates to: LYNQGLGNLQNP*HCSPLCPLQGD
Trigger: ATCCCCTTGCAGAGGGCAGAGTGGGCTACAGTGTCAAGGGTTTTGCAAATTGCCAAGACCTTGATTATAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492715.1
CDS CCA 72 bp GTGCATCTTGCAAAAAGCCCGAGAACCTTTGAGGTGTaGAGCCCTGAAAATCTACCTAGAGTCAGATCACTT +
Preference number: 6 (lower is better)
Translates to: VHLAKSPRTFEV*SPENLPRVRSL
Trigger: AAGTGATCTGACTCTAGGTAGATTTTCAGGGCTCCACACCTCAAAGGTTCTCGGGCTTTTTGCAAGATGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492715.1
CDS TCA 72 bp CTGGTTTACTTGGCATATTATCTTTTTGTCCTCTGCTaGTGCAGAACAGTGCCCAGCAAAGAGCAGGTGCTT +
Preference number: 6 (lower is better)
Translates to: LVYLAYYLFVLC*CRTVPSKEQVL
Trigger: AAGCACCTGCTCTTTGCTGGGCACTGTTCTGCATCAGCAGAGGACAAAAAGATAATATGCCAAGTAAACCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492715.1
CDS GCA 72 bp CCCTCCCCCTGCTCAGCAGATACTAAAGACAGGGCTTaGTATATGTTTACTGACCTGTTTACAAAGTTTGTG +
Preference number: 6 (lower is better)
Translates to: PSPCSADTKDRA*YMFTDLFTKFV
Trigger: CACAAACTTTGTAAACAGGTCAGTAAACATATAGCAAGCCCTGTCTTTAGTATCTGCTGAGCAGGGGGAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492715.1
CDS GCA 72 bp CTTAGCGAACACTTTATAATCAAGGTCTTGGCAATTTaGAAAACCCTTGACACTGTAGCCCACTCTGCCCTC +
Preference number: 6 (lower is better)
Translates to: LSEHFIIKVLAI*KTLDTVAHSAL
Trigger: GAGGGCAGAGTGGGCTACAGTGTCAAGGGTTTTGCAAATTGCCAAGACCTTGATTATAAAGTGTTCGCTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492715.1
CDS GCA 72 bp CATATTATCTTTTTGTCCTCTGCTGATGCAGAACAGTaGCCAGCAAAGAGCAGGTGCTTGATGAAAGTCAGT +
Preference number: 6 (lower is better)
Translates to: HIIFLSSADAEQ*PAKSRCLMKVS
Trigger: ACTGACTTTCATCAAGCACCTGCTCTTTGCTGGGCACTGTTCTGCATCAGCAGAGGACAAAAAGATAATATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492715.1
CDS CAA 72 bp AGTTCCTGTCTTAGCGAACACTTTATAATCAAGGTCTaGGCAATTTGCAAAACCCTTGACACTGTAGCCCAC +
Preference number: 6 (lower is better)
Translates to: SSCLSEHFIIKV*AICKTLDTVAH
Trigger: GTGGGCTACAGTGTCAAGGGTTTTGCAAATTGCCAAGACCTTGATTATAAAGTGTTCGCTAAGACAGGAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492715.1