RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for WDR11 (Homo sapiens)

Ensembl gene IDs: ENSG00000120008

Ensembl transcript IDs: ENST00000263461.11, ENST00000462529.2, ENST00000470052.5, ENST00000478567.5, ENST00000497136.6, ENST00000603658.1, ENST00000604220.5, ENST00000604509.5, ENST00000604585.5, ENST00000604714.1, ENST00000605069.5, ENST00000605178.5, ENST00000605202.5, ENST00000605320.1, ENST00000605376.5, ENST00000605543.5

Found 629 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGCCCGATTCCACTCGCCGTATGTCTGCAGGTAGCGGCAGGCGTCTaGAGCCTTATCTATCAGGCAGAGCAACTGAACGCCCTCTGCCAA +
Preference number: 1 (lower is better)
Translates to: SPIPLAVCLQVAAGV*SLIYQAEQLNALCQ
Trigger: TTGGCAGAGGGCGTTCAGTTGCTCTGCCTGATAGATAAGGCTGCAGACGCCTGCCGCTACCTGCAGACATACGGCGAGTGGAATCGGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR CCA 90 bp AACAGTGGTCAAACAGCTCACAGGACCCTGTACTCCTCTTCATCCTaGACTGTGACGGTGGCCACAGCCAGACCAGCCCCCTCCCATCTG +
Preference number: 1 (lower is better)
Translates to: NSGQTAHRTLYSSSS*TVTVATARPAPSHL
Trigger: CAGATGGGAGGGGGCTGGTCTGGCTGTGGCCACCGTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTGTGAGCTGTTTGACCACTGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
3UTR TCA 90 bp GCTAGAACCGCGAGAGAACATGAAGTGACTGCTCACGGGCAGGCCTaGGCAGCCCATGTGAACTCTCGGTTTACCTGTGAAGCGTCTCTG +
Preference number: 1 (lower is better)
Translates to: ARTAREHEVTAHGQA*AAHVNSRFTCEASL
Trigger: CAGAGACGCTTCACAGGTAAACCGAGAGTTCACATGGGCTGCTCAGGCCTGCCCGTGAGCAGTCACTTCATGTTCTCTCGCGGTTCTAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497136.6
3UTR GCA 90 bp TTGTTCCTCTTCCAGATTTTCAGACGGGATGTCTCCACCTCACCATaGCTTCTGTCGCCTCTCCCCCTGCTCTCTGGGCCTCCTCTCAGT +
Preference number: 1 (lower is better)
Translates to: LFLFQIFRRDVSTSP*LLSPLPLLSGPPLS
Trigger: ACTGAGAGGAGGCCCAGAGAGCAGGGGGAGAGGCGACAGAAGGCATGGTGAGGTGGAGACATCCCGTCTGAAAATCTGGAAGAGGAACAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497136.6
3UTR CCA 90 bp CAACAATACTCAGCTCTGTGTCTGAGACTACGGTCTGGCGGGCCATaGCCTCTCGAGTTGCAAGTTGCTTCTTTCTCAGGCTCTTCAAGT +
Preference number: 1 (lower is better)
Translates to: QQYSALCLRLRSGGP*PLELQVASFSGSSS
Trigger: ACTTGAAGAGCCTGAGAAAGAAGCAACTTGCAACTCGAGAGGCCATGGCCCGCCAGACCGTAGTCTCAGACACAGAGCTGAGTATTGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR CCA 90 bp ACAGATGATTCAACAATACTCAGCTCTGTGTCTGAGACTACGGTCTaGCGGGCCATGGCCTCTCGAGTTGCAAGTTGCTTCTTTCTCAGG +
Preference number: 1 (lower is better)
Translates to: TDDSTILSSVSETTV*RAMASRVASCFFLR
Trigger: CCTGAGAAAGAAGCAACTTGCAACTCGAGAGGCCATGGCCCGCCAGACCGTAGTCTCAGACACAGAGCTGAGTATTGTTGAATCATCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR TCA 90 bp TTGCCATTGGCAATCATATTCGTTGCCACCAACTTAATGGTGCTCTaGGAGGGGCCTGACGAGGTGACAGTAGTGACTAAACAGGCTTTC +
Preference number: 1 (lower is better)
Translates to: LPLAIIFVATNLMVL*EGPDEVTVVTKQAF
Trigger: GAAAGCCTGTTTAGTCACTACTGTCACCTCGTCAGGCCCCTCTCAGAGCACCATTAAGTTGGTGGCAACGAATATGATTGCCAATGGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR CCA 90 bp CTGAAAGTAGGCATTTTCACAGAGCACGTCATAGCATATATCCAGTaGGTTGCTCAGTTTGTCTCGAGGAGCAGCTTCTTTAGGAGCTGT +
Preference number: 1 (lower is better)
Translates to: LKVGIFTEHVIAYIQ*VAQFVSRSSFFRSC
Trigger: ACAGCTCCTAAAGAAGCTGCTCCTCGAGACAAACTGAGCAACCCACTGGATATATGCTATGACGTGCTCTGTGAAAATGCCTACTTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR GCA 90 bp TGCTCCCTGCTTAAAACCGAGGTTCTTCAAACTCCGGGCATAATCTaGATATATAGCAGTGATGAGTTTCTCTGTGTCCTCAGTGACTTC +
Preference number: 1 (lower is better)
Translates to: CSLLKTEVLQTPGII*IYSSDEFLCVLSDF
Trigger: GAAGTCACTGAGGACACAGAGAAACTCATCACTGCTATATATGCAGATTATGCCCGGAGTTTGAAGAACCTCGGTTTTAAGCAGGGAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR TCA 90 bp CCATCAATATCGGTAAATACAAAATGTTCCCGGGCAGAGATGTTCTaGCTAAGTTCAGATTTACTTTCTGCCTCCTGCAGCAAGCTGATC +
Preference number: 1 (lower is better)
Translates to: PSISVNTKCSRAEMF*LSSDLLSASCSKLI
Trigger: GATCAGCTTGCTGCAGGAGGCAGAAAGTAAATCTGAACTTAGTCAGAACATCTCTGCCCGGGAACATTTTGTATTTACCGATATTGATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR TCA 90 bp ACTACCCATACTTCCATCTGGTGGAATCCGAGCACTGTCTTTTACTaGGTTTCCTTCAACAGTGAGATGATACACTTGGCCATCAATATC +
Preference number: 1 (lower is better)
Translates to: TTHTSIWWNPSTVFY*VSFNSEMIHLAINI
Trigger: GATATTGATGGCCAAGTGTATCATCTCACTGTTGAAGGAAACTCAGTAAAAGACAGTGCTCGGATTCCACCAGATGGAAGTATGGGTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR CCA 90 bp CAACAGAACAAAACAAGAGTTATGCTTTGTGATTTACATCACTGGTaGGCAGCAGCATCGAAGGGTATAAAGACATTTACACATTTTCCC +
Preference number: 1 (lower is better)
Translates to: QQNKTRVMLCDLHHW*AAASKGIKTFTHFP
Trigger: GGGAAAATGTGTAAATGTCTTTATACCCTTCGATGCTGCTGCCCACCAGTGATGTAAATCACAAAGCATAACTCTTGTTTTGTTCTGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497136.6
3UTR CCA 90 bp GCTCAACAGAACAAAACAAGAGTTATGCTTTGTGATTTACATCACTaGTGGGCAGCAGCATCGAAGGGTATAAAGACATTTACACATTTT +
Preference number: 1 (lower is better)
Translates to: AQQNKTRVMLCDLHH*WAAASKGIKTFTHF
Trigger: AAAATGTGTAAATGTCTTTATACCCTTCGATGCTGCTGCCCACCAGTGATGTAAATCACAAAGCATAACTCTTGTTTTGTTCTGTTGAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497136.6
3UTR-3UTR TCA 90 bp CAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACGGTGGCCACAGCCAGACCGTAGCAGACCACTGGTaGGATGGTACACCAGGACAG +
Preference number: 2 (lower is better)
Translates to: QDPVLLFILDCDGGHSQTVADHW*DGTPGQ
Trigger: CTGTCCTGGTGTACCATCTCACCAGTGGTCTGCTAC...GGTCTGGCTGTGGCCACCGTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR-3UTR CCA 90 bp GCTCACAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACGGTGGCCACAGCCTACTCCTCTTCATCCTaGACTGTGACGGTGGCCACA +
Preference number: 2 (lower is better)
Translates to: AHRTLYSSSSWTVTVATAYSSSS*TVTVAT
Trigger: TGTGGCCACCGTCACAGTCCAGGATGAAGAGGAGTA...GGCTGTGGCCACCGTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTGTGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
3UTR-3UTR CCA 90 bp TCACAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACGGTGGCCACAGCCAGGGCAAGAGAGGCCCTTaGAACAAGGAGATAGGGGCA +
Preference number: 2 (lower is better)
Translates to: SQDPVLLFILDCDGGHSQGKRGP*NKEIGA
Trigger: TGCCCCTATCTCCTTGTTCCAAGGGCCTCTCTTGCC...CTGGCTGTGGCCACCGTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR-3UTR GCA 90 bp GCTCACAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACGGTGGCCACAGCCCATGGCCTCTCGAGTTaGAAGTTGCTTCTTTCTCAG +
Preference number: 2 (lower is better)
Translates to: AHRTLYSSSSWTVTVATAHGLSS*KLLLSQ
Trigger: CTGAGAAAGAAGCAACTTGCAACTCGAGAGGCCATG...GGCTGTGGCCACCGTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTGTGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR-3UTR GCA 90 bp GCTCACAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACGGTGGCCACAGCCCGCCCTCTGCCAATTTaGCATTGGCAATCATATTCG +
Preference number: 2 (lower is better)
Translates to: AHRTLYSSSSWTVTVATARPLPI*HWQSYS
Trigger: CGAATATGATTGCCAATGGCAAATTGGCAGAGGGCG...GGCTGTGGCCACCGTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTGTGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR CAA 90 bp GCTCTGTGTCTGAGACTACGGTCTGGCGGGCCATGGCCTCTCGAGTaGCAAGTTGCTTCTTTCTCAGGCTCTTCAAGTTGTGAGATGGTG +
Preference number: 2 (lower is better)
Translates to: ALCLRLRSGGPWPLE*QVASFSGSSSCEMV
Trigger: CACCATCTCACAACTTGAAGAGCCTGAGAAAGAAGCAACTTGCAACTCGAGAGGCCATGGCCCGCCAGACCGTAGTCTCAGACACAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR-3UTR TCA 90 bp TCACAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACGGTGGCCACAGCCAGCCTCCTGCAGCAAGCTaGTCACAGATGATTCAACAA +
Preference number: 2 (lower is better)
Translates to: SQDPVLLFILDCDGGHSQPPAAS*SQMIQQ
Trigger: TTGTTGAATCATCTGTGATCAGCTTGCTGCAGGAGG...CTGGCTGTGGCCACCGTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR-3UTR TCA 90 bp GCTCACAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACGGTGGCCACAGCCAAACTGCTCACCATCTaGACCTCTTTAGTATCCCAC +
Preference number: 2 (lower is better)
Translates to: AHRTLYSSSSWTVTVATAKLLTI*TSLVSH
Trigger: GTGGGATACTAAAGAGGTTCAGATGGTGAGCAGTTT...GGCTGTGGCCACCGTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTGTGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR-3UTR TCA 90 bp GCTCACAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACGGTGGCCACAGCCCAAGATCACTTTATCTaGCGTACACCAGTCCACATC +
Preference number: 2 (lower is better)
Translates to: AHRTLYSSSSWTVTVATAQDHFI*RTPVHI
Trigger: GATGTGGACTGGTGTACGTCAGATAAAGTGATCTTG...GGCTGTGGCCACCGTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTGTGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR-3UTR CCA 90 bp GCATATATCCAGTGGGTTGCTCAGTTTGTCTCGAGGAGCAGCTTCTTTAGGAGCCGGTCTGGCGGGCCATaGCCTCTCGAGTTGCAAGTT +
Preference number: 2 (lower is better)
Translates to: AYIQWVAQFVSRSSFFRSRSGGP*PLELQV
Trigger: AACTTGCAACTCGAGAGGCCATGGCCCGCCAGACCG...GCTCCTAAAGAAGCTGCTCCTCGAGACAAACTGAGCAACCCACTGGATATATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR-3UTR CCA 90 bp GCTCACAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACGGTGGCCACAGCCCCCAAGAGCAGTAGCTaGTCTGTACATTTCCTTGTA +
Preference number: 2 (lower is better)
Translates to: AHRTLYSSSSWTVTVATAPKSSS*SVHFLV
Trigger: TACAAGGAAATGTACAGACCAGCTACTGCTCTTGGG...GGCTGTGGCCACCGTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTGTGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR-3UTR TCA 90 bp TCACAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACGGTGGCCACAGCCAGCATTCACGTTCTTTCTaGGACCAACGCAGGATACAA +
Preference number: 2 (lower is better)
Translates to: SQDPVLLFILDCDGGHSQHSRSF*DQRRIQ
Trigger: TTGTATCCTGCGTTGGTCTCAGAAAGAACGTGAATG...CTGGCTGTGGCCACCGTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
3UTR-3UTR TCA 90 bp TTACCAGGAGCAAAACGAATCTTCCTCACCCAACTTCGGTGTGTGGGTATTCCTACTCAGCTCTGTGTCTaGGACTACGGTCTGGCGGGC +
Preference number: 2 (lower is better)
Translates to: LPGAKRIFLTQLRCVGIPTQLCV*DYGLAG
Trigger: GCCCGCCAGACCGTAGTCTCAGACACAGAGCTGAGT...AGGAATACCCACACACCGAAGTTGGGTGAGGAAGATTCGTTTTGCTCCTGGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR-3UTR TCA 90 bp CAGTGGTCAAACAGCTCACAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACATCAGGCAGAGCAACTaGACGCCCTCTGCCAATTTG +
Preference number: 2 (lower is better)
Translates to: QWSNSSQDPVLLFILDCDIRQSN*TPSANL
Trigger: CAAATTGGCAGAGGGCGTTCAGTTGCTCTGCCTGAT...GTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTGTGAGCTGTTTGACCACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR-3UTR GCA 90 bp ATTAGTGATGGTTGTTCCTCTTCCAGATTTTCAGACGGGATGTCTCCACCTCACTGTCGCCTCTCCCCCTaGTCTCTGGGCCTCCTCTCA +
Preference number: 2 (lower is better)
Translates to: ISDGCSSSRFSDGMSPPHCRLSP*SLGLLS
Trigger: TGAGAGGAGGCCCAGAGAGCAGGGGGAGAGGCGACA...GTGAGGTGGAGACATCCCGTCTGAAAATCTGGAAGAGGAACAACCATCACTAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497136.6
3UTR-3UTR CCA 90 bp TCACAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACGGTGGCCACAGCCAGCCAGGTCAGATTCCCTaGCATTTATTAAGCTGTCAC +
Preference number: 2 (lower is better)
Translates to: SQDPVLLFILDCDGGHSQPGQIP*HLLSCH
Trigger: GTGACAGCTTAATAAATGCCAGGGAATCTGACCTGG...CTGGCTGTGGCCACCGTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR-3UTR GCA 90 bp GCTCACAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACGGTGGCCACAGCCTACTCTCAACATAGATaGTTATGTGCTTTTGGGCAC +
Preference number: 2 (lower is better)
Translates to: AHRTLYSSSSWTVTVATAYSQHR*LCAFGH
Trigger: GTGCCCAAAAGCACATAAGCATCTATGTTGAGAGTA...GGCTGTGGCCACCGTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTGTGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
3UTR CAA 90 bp TCCAAGGCTGGTGTAATAAGAAGGCTTTCAAGGCAAGAGAGGCCCTaGGAACAAGGAGATAGGGGCACCACACAGGCTCGGTTAACTCTT +
Preference number: 2 (lower is better)
Translates to: SKAGVIRRLSRQERP*EQGDRGTTQARLTL
Trigger: AAGAGTTAACCGAGCCTGTGTGGTGCCCCTATCTCCTTGTTCCAAGGGCCTCTCTTGCCTTGAAAGCCTTCTTATTACACCAGCCTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR-3UTR TCA 90 bp ATTAGTGATGGTTGTTCCTCTTCCAGATTTTCAGACGGGATGTCTCCACCTCACCGAGAGAACATGAAGTaGCTGCTCACGGGCAGGCCT +
Preference number: 2 (lower is better)
Translates to: ISDGCSSSRFSDGMSPPHRENMK*LLTGRP
Trigger: AGGCCTGCCCGTGAGCAGTCACTTCATGTTCTCTCG...GTGAGGTGGAGACATCCCGTCTGAAAATCTGGAAGAGGAACAACCATCACTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497136.6
3UTR-3UTR TCA 90 bp CACTGGTGGGCAGCAGCATCGAAGGGTATAAAGACATTTACACATTTTCCCTGGAACCGCGAGAGAACATaGAGTGACTGCTCACGGGCA +
Preference number: 2 (lower is better)
Translates to: HWWAAASKGIKTFTHFPWNRERT*SDCSRA
Trigger: TGCCCGTGAGCAGTCACTTCATGTTCTCTCGCGGTT...CCAGGGAAAATGTGTAAATGTCTTTATACCCTTCGATGCTGCTGCCCACCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497136.6
3UTR-3UTR TCA 90 bp CAGTGGTCAAACAGCTCACAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACTGCTCTAGTCAAAGCTaGATGGACCCCAATTCTCTG +
Preference number: 2 (lower is better)
Translates to: QWSNSSQDPVLLFILDCDCSSQS*MDPNSL
Trigger: CAGAGAATTGGGGTCCATTCAGCTTTGACTAGAGCA...GTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTGTGAGCTGTTTGACCACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497136.6
3UTR-3UTR GCA 90 bp CAGTGGTCAAACAGCTCACAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACCGCCCTCTGCCAATTTaGCATTGGCAATCATATTCG +
Preference number: 2 (lower is better)
Translates to: QWSNSSQDPVLLFILDCDRPLPI*HWQSYS
Trigger: CGAATATGATTGCCAATGGCAAATTGGCAGAGGGCG...GTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTGTGAGCTGTTTGACCACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR-3UTR TCA 90 bp GCATATATCCAGTGGGTTGCTCAGTTTGTCTCGAGGAGCAGCTTCTTTAGGAGCATCACCATAGAGCCTTaGAACAAGCAGGCACCTCTG +
Preference number: 2 (lower is better)
Translates to: AYIQWVAQFVSRSSFFRSITIEP*NKQAPL
Trigger: CAGAGGTGCCTGCTTGTTTCAAGGCTCTATGGTGAT...GCTCCTAAAGAAGCTGCTCCTCGAGACAAACTGAGCAACCCACTGGATATATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR-3UTR GCA 90 bp TCACTGGTGGGCAGCAGCATCGAAGGGTATAAAGACATTTACACATTTTCCCTGGTAGCGGCAGGCGTCTaGAGCCTTATCTATCAGGCA +
Preference number: 2 (lower is better)
Translates to: SLVGSSIEGYKDIYTFSLVAAGV*SLIYQA
Trigger: TGCCTGATAGATAAGGCTGCAGACGCCTGCCGCTAC...CAGGGAAAATGTGTAAATGTCTTTATACCCTTCGATGCTGCTGCCCACCAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497136.6
3UTR-3UTR CCA 90 bp CTGCTTAAAACCGAGGTTCTTCAAACTCCGGGCATAATCTGCATATATAGCAGTTCTGAGACTACGGTCTaGCGGGCCATGGCCTCTCGA +
Preference number: 2 (lower is better)
Translates to: LLKTEVLQTPGIICIYSSSETTV*RAMASR
Trigger: TCGAGAGGCCATGGCCCGCCAGACCGTAGTCTCAGA...ACTGCTATATATGCAGATTATGCCCGGAGTTTGAAGAACCTCGGTTTTAAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR-3UTR CCA 90 bp GCATATATCCAGTGGGTTGCTCAGTTTGTCTCGAGGAGCAGCTTCTTTAGGAGCACCCATACTTCCATCTaGTGGAATCCGAGCACTGTC +
Preference number: 2 (lower is better)
Translates to: AYIQWVAQFVSRSSFFRSTHTSI*WNPSTV
Trigger: GACAGTGCTCGGATTCCACCAGATGGAAGTATGGGT...GCTCCTAAAGAAGCTGCTCCTCGAGACAAACTGAGCAACCCACTGGATATATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR-3UTR TCA 90 bp CCCTTGGAACAAGGAGATAGGGGCACCACACAGGCTCGGTTAACTCTTGTTCATCATTCACGTTCTTTCTaGGACCAACGCAGGATACAA +
Preference number: 2 (lower is better)
Translates to: PLEQGDRGTTQARLTLVHHSRSF*DQRRIQ
Trigger: TTGTATCCTGCGTTGGTCTCAGAAAGAACGTGAATG...ATGAACAAGAGTTAACCGAGCCTGTGTGGTGCCCCTATCTCCTTGTTCCAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR-3UTR TCA 90 bp CACTCTTCAATGGGTTCTTCCTTGGGGGACTCAAGCTCATTCAATAAGTCTTTGGTAGCAGACCACTGGTaGGATGGTACACCAGGACAG +
Preference number: 2 (lower is better)
Translates to: HSSMGSSLGDSSSFNKSLVADHW*DGTPGQ
Trigger: CTGTCCTGGTGTACCATCTCACCAGTGGTCTGCTAC...CAAAGACTTATTGAATGAGCTTGAGTCCCCCAAGGAAGAACCCATTGAAGAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR-3UTR GCA 90 bp CTGCTTAAAACCGAGGTTCTTCAAACTCCGGGCATAATCTGCATATATAGCAGTGACTTTTGCCAGCCATaGAGCCCGATTCCACTCGCC +
Preference number: 2 (lower is better)
Translates to: LLKTEVLQTPGIICIYSSDFCQP*SPIPLA
Trigger: GGCGAGTGGAATCGGGCTGCATGGCTGGCAAAAGTC...ACTGCTATATATGCAGATTATGCCCGGAGTTTGAAGAACCTCGGTTTTAAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR-3UTR CCA 90 bp AGTCTTAGAACAGTGGTCAAACAGCTCACAGGACCCTGTACTCCTCTTCATCCTAGACCACTGGTGAGATaGTACACCAGGACAGAACCA +
Preference number: 2 (lower is better)
Translates to: SLRTVVKQLTGPCTPLHPRPLVR*YTRTEP
Trigger: TGGTTCTGTCCTGGTGTACCATCTCACCAGTGGTCT...AGGATGAAGAGGAGTACAGGGTCCTGTGAGCTGTTTGACCACTGTTCTAAGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR-3UTR TCA 90 bp GCCTTAAAACATCGGCACACTCCTCAGGATTCAAACGGACTTTTGCCAGCCATGCCAGGGGTTTATCTCTaGATACGACTGCCAAATACT +
Preference number: 2 (lower is better)
Translates to: ALKHRHTPQDSNGLLPAMPGVYL*IRLPNT
Trigger: AGTATTTGGCAGTCGTATTCAGAGATAAACCCCTGG...CATGGCTGGCAAAAGTCCGTTTGAATCCTGAGGAGTGTGCCGATGTTTTAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR-3UTR TCA 90 bp TCAACCCACCGCCTTAAAACATCGGCACACTCCTCAGGATTCAAACGGACTTTTGATGCACCCATCATCTaGGGCCAAGATCACTTTATC +
Preference number: 2 (lower is better)
Translates to: STHRLKTSAHSSGFKRTFDAPII*GQDHFI
Trigger: GATAAAGTGATCTTGGCCTCAGATGATGGGTGCATC...AAAAGTCCGTTTGAATCCTGAGGAGTGTGCCGATGTTTTAAGGCGGTGGGTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR-3UTR GCA 90 bp CCCTTGGAACAAGGAGATAGGGGCACCACACAGGCTCGGTTAACTCTTGTTCATTGGCAGATTCATCATTaGCTCTTTCACCACGAAAAG +
Preference number: 2 (lower is better)
Translates to: PLEQGDRGTTQARLTLVHWQIHH*LFHHEK
Trigger: CTTTTCGTGGTGAAAGAGGCAATGATGAATCTGCCA...ATGAACAAGAGTTAACCGAGCCTGTGTGGTGCCCCTATCTCCTTGTTCCAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR CAA 90 bp GTCCATTCAATACCCTTGACTTCACATGAGTGGATGCTTAACTCTTaGTGTAGCAGACCACTGGTGAGATGGTACACCAGGACAGAACCA +
Preference number: 2 (lower is better)
Translates to: VHSIPLTSHEWMLNS*CSRPLVRWYTRTEP
Trigger: TGGTTCTGTCCTGGTGTACCATCTCACCAGTGGTCTGCTACACAAAGAGTTAAGCATCCACTCATGTGAAGTCAAGGGTATTGAATGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR CAA 90 bp ATTCCCTGGCATTTATTAAGCTGTCACTCTTCAATGGGTTCTTCCTaGGGGGACTCAAGCTCATTCAATAAGTCTTTGCCAGCTGCTCCG +
Preference number: 2 (lower is better)
Translates to: IPWHLLSCHSSMGSS*GDSSSFNKSLPAAP
Trigger: CGGAGCAGCTGGCAAAGACTTATTGAATGAGCTTGAGTCCCCCAAGGAAGAACCCATTGAAGAGTGACAGCTTAATAAATGCCAGGGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR-3UTR TCA 90 bp GCCTTAAAACATCGGCACACTCCTCAGGATTCAAACGGACTTTTGCCAGCCATGCGGGCAGAGATGTTCTaGCTAAGTTCAGATTTACTT +
Preference number: 2 (lower is better)
Translates to: ALKHRHTPQDSNGLLPAMRAEMF*LSSDLL
Trigger: AAGTAAATCTGAACTTAGTCAGAACATCTCTGCCCG...CATGGCTGGCAAAAGTCCGTTTGAATCCTGAGGAGTGTGCCGATGTTTTAAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR-3UTR TCA 90 bp AAAACCGAGGTTCTTCAAACTCCGGGCATAATCTGCATATATAGCAGTGATGAGATCAGGCAGAGCAACTaGACGCCCTCTGCCAATTTG +
Preference number: 2 (lower is better)
Translates to: KTEVLQTPGIICIYSSDEIRQSN*TPSANL
Trigger: CAAATTGGCAGAGGGCGTTCAGTTGCTCTGCCTGAT...CTCATCACTGCTATATATGCAGATTATGCCCGGAGTTTGAAGAACCTCGGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR-3UTR GCA 90 bp TCAACCCACCGCCTTAAAACATCGGCACACTCCTCAGGATTCAAACGGACTTTTGACCGTTTCACTTCCTaGAGATTAACCCTTTCTAGC +
Preference number: 2 (lower is better)
Translates to: STHRLKTSAHSSGFKRTFDRFTS*RLTLSS
Trigger: GCTAGAAAGGGTTAATCTGCAGGAAGTGAAACGGTC...AAAAGTCCGTTTGAATCCTGAGGAGTGTGCCGATGTTTTAAGGCGGTGGGTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR-3UTR CCA 90 bp CAGTGGTCAAACAGCTCACAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACATGCTTATGTGCTTTTaGGCACACATAGTCTTAGAA +
Preference number: 2 (lower is better)
Translates to: QWSNSSQDPVLLFILDCDMLMCF*AHIVLE
Trigger: TTCTAAGACTATGTGTGCCCAAAAGCACATAAGCAT...GTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTGTGAGCTGTTTGACCACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
3UTR-3UTR CCA 90 bp CTTCAATGGGTTCTTCCTTGGGGGACTCAAGCTCATTCAATAAGTCTTTGCCAGTGTGGAGAACAAAGGTaGTCAACCCACCGCCTTAAA +
Preference number: 2 (lower is better)
Translates to: LQWVLPWGTQAHSISLCQCGEQR*STHRLK
Trigger: TTTAAGGCGGTGGGTTGACCACCTTTGTTCTCCACA...CTGGCAAAGACTTATTGAATGAGCTTGAGTCCCCCAAGGAAGAACCCATTGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR-3UTR TCA 90 bp ATTAGTGATGGTTGTTCCTCTTCCAGATTTTCAGACGGGATGTCTCCACCTCACCCAGGGGTTTATCTCTaGATACGACTGCCAAATACT +
Preference number: 2 (lower is better)
Translates to: ISDGCSSSRFSDGMSPPHPGVYL*IRLPNT
Trigger: AGTATTTGGCAGTCGTATTCAGAGATAAACCCCTGG...GTGAGGTGGAGACATCCCGTCTGAAAATCTGGAAGAGGAACAACCATCACTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497136.6
3UTR-3UTR TCA 90 bp TCACTGGTGGGCAGCAGCATCGAAGGGTATAAAGACATTTACACATTTTCCCTGACCTCTGCAAGAGAGTaGATTCTGGATCAAGCAACA +
Preference number: 2 (lower is better)
Translates to: SLVGSSIEGYKDIYTFSLTSARE*ILDQAT
Trigger: TGTTGCTTGATCCAGAATTCACTCTCTTGCAGAGGT...CAGGGAAAATGTGTAAATGTCTTTATACCCTTCGATGCTGCTGCCCACCAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497136.6
3UTR-3UTR GCA 90 bp CTTCAATGGGTTCTTCCTTGGGGGACTCAAGCTCATTCAATAAGTCTTTGCCAGCACCACGAAAAGCAATaGTCCTACCTGTTGGAAGAT +
Preference number: 2 (lower is better)
Translates to: LQWVLPWGTQAHSISLCQHHEKQ*SYLLED
Trigger: ATCTTCCAACAGGTAGGAGCATTGCTTTTCGTGGTG...CTGGCAAAGACTTATTGAATGAGCTTGAGTCCCCCAAGGAAGAACCCATTGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR-3UTR GCA 90 bp CACTCTTCAATGGGTTCTTCCTTGGGGGACTCAAGCTCATTCAATAAGTCTTTGACAAGCAGGCACCTCTaGAAGAGAGTGAATTCTGGA +
Preference number: 2 (lower is better)
Translates to: HSSMGSSLGDSSSFNKSLTSRHL*KRVNSG
Trigger: TCCAGAATTCACTCTCTTGCAGAGGTGCCTGCTTGT...CAAAGACTTATTGAATGAGCTTGAGTCCCCCAAGGAAGAACCCATTGAAGAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR-3UTR CCA 90 bp TCAACCCACCGCCTTAAAACATCGGCACACTCCTCAGGATTCAAACGGACTTTTATAGTCTTAGAACAGTaGTCAAACAGCTCACAGGAC +
Preference number: 2 (lower is better)
Translates to: STHRLKTSAHSSGFKRTFIVLEQ*SNSSQD
Trigger: GTCCTGTGAGCTGTTTGACCACTGTTCTAAGACTAT...AAAAGTCCGTTTGAATCCTGAGGAGTGTGCCGATGTTTTAAGGCGGTGGGTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR-3UTR CCA 90 bp TTACCAGGAGCAAAACGAATCTTCCTCACCCAACTTCGGTGTGTGGGTATTCCTAATGCTCCTACCTGTTaGAAGATCAACCAGTTGAAG +
Preference number: 2 (lower is better)
Translates to: LPGAKRIFLTQLRCVGIPNAPTC*KINQLK
Trigger: CTTCAACTGGTTGATCTTCCAACAGGTAGGAGCATT...AGGAATACCCACACACCGAAGTTGGGTGAGGAAGATTCGTTTTGCTCCTGGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR-3UTR TCA 90 bp CTTCAATGGGTTCTTCCTTGGGGGACTCAAGCTCATTCAATAAGTCTTTGCCAGCAAGCTGATCACAGATaGTTCAACAATACTCAGCTC +
Preference number: 2 (lower is better)
Translates to: LQWVLPWGTQAHSISLCQQADHR*FNNTQL
Trigger: GAGCTGAGTATTGTTGAATCATCTGTGATCAGCTTG...CTGGCAAAGACTTATTGAATGAGCTTGAGTCCCCCAAGGAAGAACCCATTGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR-3UTR TCA 90 bp CTACCCATACTTCCATCTGGTGGAATCCGAGCACTGTCTTTTACTGAGTTTCCTCAAGCTGATCACAGATaGTTCAACAATACTCAGCTC +
Preference number: 2 (lower is better)
Translates to: LPILPSGGIRALSFTEFPQADHR*FNNTQL
Trigger: GAGCTGAGTATTGTTGAATCATCTGTGATCAGCTTG...AGGAAACTCAGTAAAAGACAGTGCTCGGATTCCACCAGATGGAAGTATGGGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR-3UTR TCA 90 bp CACTCTTCAATGGGTTCTTCCTTGGGGGACTCAAGCTCATTCAATAAGTCTTTGAACCAGGAGAGCCTTTaGTTTCTGATTGACTTGTGG +
Preference number: 2 (lower is better)
Translates to: HSSMGSSLGDSSSFNKSLNQESL*FLIDLW
Trigger: CCACAAGTCAATCAGAAATCAAAGGCTCTCCTGGTT...CAAAGACTTATTGAATGAGCTTGAGTCCCCCAAGGAAGAACCCATTGAAGAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR-3UTR GCA 90 bp AAAACCGAGGTTCTTCAAACTCCGGGCATAATCTGCATATATAGCAGTGATGAGCATGGCCTCTCGAGTTaGAAGTTGCTTCTTTCTCAG +
Preference number: 2 (lower is better)
Translates to: KTEVLQTPGIICIYSSDEHGLSS*KLLLSQ
Trigger: CTGAGAAAGAAGCAACTTGCAACTCGAGAGGCCATG...CTCATCACTGCTATATATGCAGATTATGCCCGGAGTTTGAAGAACCTCGGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR-3UTR GCA 90 bp ATTAGTGATGGTTGTTCCTCTTCCAGATTTTCAGACGGGATGTCTCCACCTCACTTCCTCTGGATACTCTaGCTTTCAAGTCCCAGAAAT +
Preference number: 2 (lower is better)
Translates to: ISDGCSSSRFSDGMSPPHFLWIL*LSSPRN
Trigger: ATTTCTGGGACTTGAAAGGCAGAGTATCCAGAGGAA...GTGAGGTGGAGACATCCCGTCTGAAAATCTGGAAGAGGAACAACCATCACTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497136.6
3UTR-3UTR GCA 90 bp CTGCTTAAAACCGAGGTTCTTCAAACTCCGGGCATAATCTGCATATATAGCAGTACAAGCAGGCACCTCTaGAAGAGAGTGAATTCTGGA +
Preference number: 2 (lower is better)
Translates to: LLKTEVLQTPGIICIYSSTSRHL*KRVNSG
Trigger: TCCAGAATTCACTCTCTTGCAGAGGTGCCTGCTTGT...ACTGCTATATATGCAGATTATGCCCGGAGTTTGAAGAACCTCGGTTTTAAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR-3UTR GCA 90 bp AAAACCGAGGTTCTTCAAACTCCGGGCATAATCTGCATATATAGCAGTGATGAGATTCAAACGGACTTTTaGCAGCCATGCAGCCCGATT +
Preference number: 2 (lower is better)
Translates to: KTEVLQTPGIICIYSSDEIQTDF*QPCSPI
Trigger: AATCGGGCTGCATGGCTGGCAAAAGTCCGTTTGAAT...CTCATCACTGCTATATATGCAGATTATGCCCGGAGTTTGAAGAACCTCGGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR-3UTR CCA 90 bp CCTATCGGACTAAACATAAATCTTAAAACCTCCTATGGTCCTCTGAGCCTAAAATACTCCTCTTCATCCTaGACTGTGACGGTGGCCACA +
Preference number: 2 (lower is better)
Translates to: PIGLNINLKTSYGPLSLKYSSSS*TVTVAT
Trigger: TGTGGCCACCGTCACAGTCCAGGATGAAGAGGAGTA...TTTTAGGCTCAGAGGACCATAGGAGGTTTTAAGATTTATGTTTAGTCCGATAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263461.11
ENST00000497136.6
3UTR-3UTR CCA 90 bp GTAGGCATTTTCACAGAGCACGTCATAGCATATATCCAGTGGGTTGCTCAGTTTGTGTGGGTATTCCTCTaGATACTCTGCCTTTCAAGT +
Preference number: 2 (lower is better)
Translates to: VGIFTEHVIAYIQWVAQFVWVFL*ILCLSS
Trigger: ACTTGAAAGGCAGAGTATCCAGAGGAATACCCACAC...AAACTGAGCAACCCACTGGATATATGCTATGACGTGCTCTGTGAAAATGCCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR-3UTR CCA 90 bp AACTCTTGTTCATCCATTCTAAAGCACGCAGACTTCATAGACATCTCTAGGACTCCCAACTTCGGTGTGTaGGTATTCCTCTGGATACTC +
Preference number: 2 (lower is better)
Translates to: NSCSSILKHADFIDISRTPNFGV*VFLWIL
Trigger: GAGTATCCAGAGGAATACCCACACACCGAAGTTGGG...AGTCCTAGAGATGTCTATGAAGTCTGCGTGCTTTAGAATGGATGAACAAGAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR-3UTR CCA 90 bp GCATATATCCAGTGGGTTGCTCAGTTTGTCTCGAGGAGCAGCTTCTTTAGGAGCCAAGAGAGTGAATTCTaGATCAAGCAACAGTTTCTT +
Preference number: 2 (lower is better)
Translates to: AYIQWVAQFVSRSSFFRSQESEF*IKQQFL
Trigger: AAGAAACTGTTGCTTGATCCAGAATTCACTCTCTTG...GCTCCTAAAGAAGCTGCTCCTCGAGACAAACTGAGCAACCCACTGGATATATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR-3UTR TCA 90 bp ATGCTTATGTGCTTTTGGGCACACATAGTCTTAGAACAGTGGTCAAACAGCTCATCCATTCAATACCCTTaGCTTCACATGAGTGGATGC +
Preference number: 2 (lower is better)
Translates to: MLMCFWAHIVLEQWSNSSSIQYP*LHMSGC
Trigger: GCATCCACTCATGTGAAGTCAAGGGTATTGAATGGA...TGAGCTGTTTGACCACTGTTCTAAGACTATGTGTGCCCAAAAGCACATAAGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR-3UTR TCA 90 bp TCAACCCACCGCCTTAAAACATCGGCACACTCCTCAGGATTCAAACGGACTTTTGGAAGATCAACCAGTTaGAGTTCATTTCTCACTAAT +
Preference number: 2 (lower is better)
Translates to: STHRLKTSAHSSGFKRTFGRSTS*SSFLTN
Trigger: ATTAGTGAGAAATGAACTTCAACTGGTTGATCTTCC...AAAAGTCCGTTTGAATCCTGAGGAGTGTGCCGATGTTTTAAGGCGGTGGGTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR-3UTR TCA 90 bp AAAACCGAGGTTCTTCAAACTCCGGGCATAATCTGCATATATAGCAGTGATGAGAAACTGCTCACCATCTaGACCTCTTTAGTATCCCAC +
Preference number: 2 (lower is better)
Translates to: KTEVLQTPGIICIYSSDEKLLTI*TSLVSH
Trigger: GTGGGATACTAAAGAGGTTCAGATGGTGAGCAGTTT...CTCATCACTGCTATATATGCAGATTATGCCCGGAGTTTGAAGAACCTCGGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR-3UTR TCA 90 bp CTGCTTAAAACCGAGGTTCTTCAAACTCCGGGCATAATCTGCATATATAGCAGTCAAGATCACTTTATCTaGCGTACACCAGTCCACATC +
Preference number: 2 (lower is better)
Translates to: LLKTEVLQTPGIICIYSSQDHFI*RTPVHI
Trigger: GATGTGGACTGGTGTACGTCAGATAAAGTGATCTTG...ACTGCTATATATGCAGATTATGCCCGGAGTTTGAAGAACCTCGGTTTTAAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR-3UTR TCA 90 bp CTTCAATGGGTTCTTCCTTGGGGGACTCAAGCTCATTCAATAAGTCTTTGCCAGAGAGCCTTTGATTTCTaGTTGACTTGTGGAGAACAA +
Preference number: 2 (lower is better)
Translates to: LQWVLPWGTQAHSISLCQRAFDF*LTCGEQ
Trigger: TTGTTCTCCACAAGTCAATCAGAAATCAAAGGCTCT...CTGGCAAAGACTTATTGAATGAGCTTGAGTCCCCCAAGGAAGAACCCATTGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR-3UTR GCA 90 bp TTACCAGGAGCAAAACGAATCTTCCTCACCCAACTTCGGTGTGTGGGTATTCCTATCTCTGAATACGACTaGCAAATACTGCTTCAAATG +
Preference number: 2 (lower is better)
Translates to: LPGAKRIFLTQLRCVGIPISEYD*QILLQM
Trigger: CATTTGAAGCAGTATTTGGCAGTCGTATTCAGAGAT...AGGAATACCCACACACCGAAGTTGGGTGAGGAAGATTCGTTTTGCTCCTGGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR-3UTR GCA 90 bp GTAGGCATTTTCACAGAGCACGTCATAGCATATATCCAGTGGGTTGCTCAGTTTTTCAGATTTACTTTCTaGCTCCTGCAGCAAGCTGAT +
Preference number: 2 (lower is better)
Translates to: VGIFTEHVIAYIQWVAQFFRFTF*LLQQAD
Trigger: ATCAGCTTGCTGCAGGAGGCAGAAAGTAAATCTGAA...AAACTGAGCAACCCACTGGATATATGCTATGACGTGCTCTGTGAAAATGCCTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR-3UTR GCA 90 bp GTAGGCATTTTCACAGAGCACGTCATAGCATATATCCAGTGGGTTGCTCAGTTTTTCCTCTGGATACTCTaGCTTTCAAGTCCCAGAAAT +
Preference number: 2 (lower is better)
Translates to: VGIFTEHVIAYIQWVAQFFLWIL*LSSPRN
Trigger: ATTTCTGGGACTTGAAAGGCAGAGTATCCAGAGGAA...AAACTGAGCAACCCACTGGATATATGCTATGACGTGCTCTGTGAAAATGCCTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR-3UTR CCA 90 bp TTAATCATTTCGATGGCAGATTCATCATTGCCTCTTTCACCACGAAAAGCAATGAGACCACTGGTGAGATaGTACACCAGGACAGAACCA +
Preference number: 2 (lower is better)
Translates to: LIISMADSSLPLSPRKAMRPLVR*YTRTEP
Trigger: TGGTTCTGTCCTGGTGTACCATCTCACCAGTGGTCT...CATTGCTTTTCGTGGTGAAAGAGGCAATGATGAATCTGCCATCGAAATGATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR-3UTR CCA 90 bp TTACCAGGAGCAAAACGAATCTTCCTCACCCAACTTCGGTGTGTGGGTATTCCTTTGACTTCACATGAGTaGATGCTTAACTCTTTGTGT +
Preference number: 2 (lower is better)
Translates to: LPGAKRIFLTQLRCVGIPLTSHE*MLNSLC
Trigger: ACACAAAGAGTTAAGCATCCACTCATGTGAAGTCAA...AGGAATACCCACACACCGAAGTTGGGTGAGGAAGATTCGTTTTGCTCCTGGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR CAA 90 bp AACGCAGGATACAAACTTACTCTCAACATAGATGCTTATGTGCTTTaGGGCACACATAGTCTTAGAACAGTGGTCAAACAGCTCACAGGA +
Preference number: 2 (lower is better)
Translates to: NAGYKLTLNIDAYVL*GTHSLRTVVKQLTG
Trigger: TCCTGTGAGCTGTTTGACCACTGTTCTAAGACTATGTGTGCCCAAAAGCACATAAGCATCTATGTTGAGAGTAAGTTTGTATCCTGCGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
3UTR-3UTR TCA 90 bp AAAACCGAGGTTCTTCAAACTCCGGGCATAATCTGCATATATAGCAGTGATGAGAGCACTGTCTTTTACTaGGTTTCCTTCAACAGTGAG +
Preference number: 2 (lower is better)
Translates to: KTEVLQTPGIICIYSSDESTVFY*VSFNSE
Trigger: CTCACTGTTGAAGGAAACTCAGTAAAAGACAGTGCT...CTCATCACTGCTATATATGCAGATTATGCCCGGAGTTTGAAGAACCTCGGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR-3UTR TCA 90 bp CTGCTTAAAACCGAGGTTCTTCAAACTCCGGGCATAATCTGCATATATAGCAGTAGCACTGTCTTTTACTaGGTTTCCTTCAACAGTGAG +
Preference number: 2 (lower is better)
Translates to: LLKTEVLQTPGIICIYSSSTVFY*VSFNSE
Trigger: CTCACTGTTGAAGGAAACTCAGTAAAAGACAGTGCT...ACTGCTATATATGCAGATTATGCCCGGAGTTTGAAGAACCTCGGTTTTAAGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR-3UTR TCA 90 bp TCTCTGAAGACTTTTAAATTCCCTTTTACTAGGTGCCTGTTAAGTCTGATCAGCGATGCACCCATCATCTaGGGCCAAGATCACTTTATC +
Preference number: 2 (lower is better)
Translates to: SLKTFKFPFTRCLLSLISDAPII*GQDHFI
Trigger: GATAAAGTGATCTTGGCCTCAGATGATGGGTGCATC...GCTGATCAGACTTAACAGGCACCTAGTAAAAGGGAATTTAAAAGTCTTCAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497136.6
3UTR-3UTR GCA 90 bp GTAGGCATTTTCACAGAGCACGTCATAGCATATATCCAGTGGGTTGCTCAGTTTTACTCTCAACATAGATaGTTATGTGCTTTTGGGCAC +
Preference number: 2 (lower is better)
Translates to: VGIFTEHVIAYIQWVAQFYSQHR*LCAFGH
Trigger: GTGCCCAAAAGCACATAAGCATCTATGTTGAGAGTA...AAACTGAGCAACCCACTGGATATATGCTATGACGTGCTCTGTGAAAATGCCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR-3UTR GCA 90 bp CACTCTTCAATGGGTTCTTCCTTGGGGGACTCAAGCTCATTCAATAAGTCTTTGCTTCACATGAGTGGATaGTTAACTCTTTGTGTAGCA +
Preference number: 2 (lower is better)
Translates to: HSSMGSSLGDSSSFNKSLLHMSG*LTLCVA
Trigger: TGCTACACAAAGAGTTAAGCATCCACTCATGTGAAG...CAAAGACTTATTGAATGAGCTTGAGTCCCCCAAGGAAGAACCCATTGAAGAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR-3UTR CCA 90 bp CTGCTTAAAACCGAGGTTCTTCAAACTCCGGGCATAATCTGCATATATAGCAGTATAGTCTTAGAACAGTaGTCAAACAGCTCACAGGAC +
Preference number: 2 (lower is better)
Translates to: LLKTEVLQTPGIICIYSSIVLEQ*SNSSQD
Trigger: GTCCTGTGAGCTGTTTGACCACTGTTCTAAGACTAT...ACTGCTATATATGCAGATTATGCCCGGAGTTTGAAGAACCTCGGTTTTAAGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR-3UTR CCA 90 bp AACTCTTGTTCATCCATTCTAAAGCACGCAGACTTCATAGACATCTCTAGGACTCATACTTCCATCTGGTaGAATCCGAGCACTGTCTTT +
Preference number: 2 (lower is better)
Translates to: NSCSSILKHADFIDISRTHTSIW*NPSTVF
Trigger: AAAGACAGTGCTCGGATTCCACCAGATGGAAGTATG...AGTCCTAGAGATGTCTATGAAGTCTGCGTGCTTTAGAATGGATGAACAAGAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR-3UTR CCA 90 bp AAAACCGAGGTTCTTCAAACTCCGGGCATAATCTGCATATATAGCAGTGATGAGATAGCATATATCCAGTaGGTTGCTCAGTTTGTCTCG +
Preference number: 2 (lower is better)
Translates to: KTEVLQTPGIICIYSSDEIAYIQ*VAQFVS
Trigger: CGAGACAAACTGAGCAACCCACTGGATATATGCTAT...CTCATCACTGCTATATATGCAGATTATGCCCGGAGTTTGAAGAACCTCGGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR-3UTR TCA 90 bp CACTCTTCAATGGGTTCTTCCTTGGGGGACTCAAGCTCATTCAATAAGTCTTTGGGAAGATCAACCAGTTaGAGTTCATTTCTCACTAAT +
Preference number: 2 (lower is better)
Translates to: HSSMGSSLGDSSSFNKSLGRSTS*SSFLTN
Trigger: ATTAGTGAGAAATGAACTTCAACTGGTTGATCTTCC...CAAAGACTTATTGAATGAGCTTGAGTCCCCCAAGGAAGAACCCATTGAAGAGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR-3UTR GCA 90 bp AACTCTTGTTCATCCATTCTAAAGCACGCAGACTTCATAGACATCTCTAGGACTTTCAGATTTACTTTCTaGCTCCTGCAGCAAGCTGAT +
Preference number: 2 (lower is better)
Translates to: NSCSSILKHADFIDISRTFRFTF*LLQQAD
Trigger: ATCAGCTTGCTGCAGGAGGCAGAAAGTAAATCTGAA...AGTCCTAGAGATGTCTATGAAGTCTGCGTGCTTTAGAATGGATGAACAAGAGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR-3UTR GCA 90 bp CAGGGGTTTATCTCTGAATACGACTGCCAAATACTGCTTCAAATGAGATACTTTTGGCAGATTCATCATTaGCTCTTTCACCACGAAAAG +
Preference number: 2 (lower is better)
Translates to: QGFISEYDCQILLQMRYFWQIHH*LFHHEK
Trigger: CTTTTCGTGGTGAAAGAGGCAATGATGAATCTGCCA...AAAGTATCTCATTTGAAGCAGTATTTGGCAGTCGTATTCAGAGATAAACCCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR-3UTR GCA 90 bp AACTCTTGTTCATCCATTCTAAAGCACGCAGACTTCATAGACATCTCTAGGACTGAAAGGTCACATTTCTaGCACTTCTTAAACTGCTCA +
Preference number: 2 (lower is better)
Translates to: NSCSSILKHADFIDISRTERSHF*HFLNCS
Trigger: TGAGCAGTTTAAGAAGTGGCAGAAATGTGACCTTTC...AGTCCTAGAGATGTCTATGAAGTCTGCGTGCTTTAGAATGGATGAACAAGAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR-3UTR CCA 90 bp CAGGGGTTTATCTCTGAATACGACTGCCAAATACTGCTTCAAATGAGATACTTTAATGCTCCTACCTGTTaGAAGATCAACCAGTTGAAG +
Preference number: 2 (lower is better)
Translates to: QGFISEYDCQILLQMRYFNAPTC*KINQLK
Trigger: CTTCAACTGGTTGATCTTCCAACAGGTAGGAGCATT...AAAGTATCTCATTTGAAGCAGTATTTGGCAGTCGTATTCAGAGATAAACCCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR-3UTR GCA 90 bp CAGGGGTTTATCTCTGAATACGACTGCCAAATACTGCTTCAAATGAGATACTTTCTTCACATGAGTGGATaGTTAACTCTTTGTGTAGCA +
Preference number: 2 (lower is better)
Translates to: QGFISEYDCQILLQMRYFLHMSG*LTLCVA
Trigger: TGCTACACAAAGAGTTAAGCATCCACTCATGTGAAG...AAAGTATCTCATTTGAAGCAGTATTTGGCAGTCGTATTCAGAGATAAACCCCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR-3UTR GCA 90 bp AAACTTACTCTCAACATAGATGCTTATGTGCTTTTGGGCACACATAGTCTTAGATTCCCTTTTACTAGGTaGCTGTTAAGTCTGATCAGC +
Preference number: 2 (lower is better)
Translates to: KLTLNIDAYVLLGTHSLRFPFTR*LLSLIS
Trigger: GCTGATCAGACTTAACAGGCACCTAGTAAAAGGGAA...TCTAAGACTATGTGTGCCCAAAAGCACATAAGCATCTATGTTGAGAGTAAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497136.6
3UTR-3UTR TCA 90 bp AAACTTACTCTCAACATAGATGCTTATGTGCTTTTGGGCACACATAGTCTTAGAAGAGCCTTTGATTTCTaGTTGACTTGTGGAGAACAA +
Preference number: 2 (lower is better)
Translates to: KLTLNIDAYVLLGTHSLRRAFDF*LTCGEQ
Trigger: TTGTTCTCCACAAGTCAATCAGAAATCAAAGGCTCT...TCTAAGACTATGTGTGCCCAAAAGCACATAAGCATCTATGTTGAGAGTAAGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR-3UTR CCA 90 bp AAACTTACTCTCAACATAGATGCTTATGTGCTTTTGGGCACACATAGTCTTAGATTGACTTCACATGAGTaGATGCTTAACTCTTTGTGT +
Preference number: 2 (lower is better)
Translates to: KLTLNIDAYVLLGTHSLRLTSHE*MLNSLC
Trigger: ACACAAAGAGTTAAGCATCCACTCATGTGAAGTCAA...TCTAAGACTATGTGTGCCCAAAAGCACATAAGCATCTATGTTGAGAGTAAGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR TCA 72 bp CTCACAGGACCCTGTACTCCTCTTCATCCTGGACTGTaGCGGTGGCCACAGCCAGACCAGCCCCCTCCCATC +
Preference number: 3 (lower is better)
Translates to: LTGPCTPLHPGL*RWPQPDQPPPI
Trigger: GATGGGAGGGGGCTGGTCTGGCTGTGGCCACCGTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTGTGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
3UTR GCA 72 bp CCACTCGCCGTATGTCTGCAGGTAGCGGCAGGCGTCTaGAGCCTTATCTATCAGGCAGAGCAACTGAACGCC +
Preference number: 3 (lower is better)
Translates to: PLAVCLQVAAGV*SLIYQAEQLNA
Trigger: GGCGTTCAGTTGCTCTGCCTGATAGATAAGGCTGCAGACGCCTGCCGCTACCTGCAGACATACGGCGAGTGG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR CCA 72 bp TCAGCTCTGTGTCTGAGACTACGGTCTGGCGGGCCATaGCCTCTCGAGTTGCAAGTTGCTTCTTTCTCAGGC +
Preference number: 3 (lower is better)
Translates to: SALCLRLRSGGP*PLELQVASFSG
Trigger: GCCTGAGAAAGAAGCAACTTGCAACTCGAGAGGCCATGGCCCGCCAGACCGTAGTCTCAGACACAGAGCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR-3UTR CAA 90 bp TCACAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACGGTGGCCACAGCCAGTCAATGGGTTCTTCCTaGGGGGACTCAAGCTCATTC +
Preference number: 3 (lower is better)
Translates to: SQDPVLLFILDCDGGHSQSMGSS*GDSSSF
Trigger: GAATGAGCTTGAGTCCCCCAAGGAAGAACCCATTGA...CTGGCTGTGGCCACCGTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR TCA 72 bp GCGAGAGAACATGAAGTGACTGCTCACGGGCAGGCCTaGGCAGCCCATGTGAACTCTCGGTTTACCTGTGAA +
Preference number: 3 (lower is better)
Translates to: AREHEVTAHGQA*AAHVNSRFTCE
Trigger: TTCACAGGTAAACCGAGAGTTCACATGGGCTGCTCAGGCCTGCCCGTGAGCAGTCACTTCATGTTCTCTCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497136.6
3UTR-3UTR CAA 90 bp GCTCACAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACGGTGGCCACAGCCGTCCATTCAATACCCTaGACTTCACATGAGTGGATG +
Preference number: 3 (lower is better)
Translates to: AHRTLYSSSSWTVTVATAVHSIP*TSHEWM
Trigger: CATCCACTCATGTGAAGTCAAGGGTATTGAATGGAC...GGCTGTGGCCACCGTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTGTGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR GCA 72 bp ACACTCCTCAGGATTCAAACGGACTTTTGCCAGCCATaGAGCCCGATTCCACTCGCCGTATGTCTGCAGGTA +
Preference number: 3 (lower is better)
Translates to: TLLRIQTDFCQP*SPIPLAVCLQV
Trigger: TACCTGCAGACATACGGCGAGTGGAATCGGGCTGCATGGCTGGCAAAAGTCCGTTTGAATCCTGAGGAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR CCA 72 bp TCAACAATACTCAGCTCTGTGTCTGAGACTACGGTCTaGCGGGCCATGGCCTCTCGAGTTGCAAGTTGCTTC +
Preference number: 3 (lower is better)
Translates to: STILSSVSETTV*RAMASRVASCF
Trigger: GAAGCAACTTGCAACTCGAGAGGCCATGGCCCGCCAGACCGTAGTCTCAGACACAGAGCTGAGTATTGTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR-3UTR CAA 90 bp GCCTTAAAACATCGGCACACTCCTCAGGATTCAAACGGACTTTTGCCAGCCATGCATCACCATAGAGCCTaGAAACAAGCAGGCACCTCT +
Preference number: 3 (lower is better)
Translates to: ALKHRHTPQDSNGLLPAMHHHRA*KQAGTS
Trigger: AGAGGTGCCTGCTTGTTTCAAGGCTCTATGGTGATG...CATGGCTGGCAAAAGTCCGTTTGAATCCTGAGGAGTGTGCCGATGTTTTAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR-3UTR CAA 90 bp ATTAGTGATGGTTGTTCCTCTTCCAGATTTTCAGACGGGATGTCTCCACCTCACGATTCAAACGGACTTTaGCCAGCCATGCAGCCCGAT +
Preference number: 3 (lower is better)
Translates to: ISDGCSSSRFSDGMSPPHDSNGL*PAMQPD
Trigger: ATCGGGCTGCATGGCTGGCAAAAGTCCGTTTGAATC...GTGAGGTGGAGACATCCCGTCTGAAAATCTGGAAGAGGAACAACCATCACTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497136.6
3UTR TCA 72 bp GCAATCATATTCGTTGCCACCAACTTAATGGTGCTCTaGGAGGGGCCTGACGAGGTGACAGTAGTGACTAAA +
Preference number: 3 (lower is better)
Translates to: AIIFVATNLMVL*EGPDEVTVVTK
Trigger: TTTAGTCACTACTGTCACCTCGTCAGGCCCCTCTCAGAGCACCATTAAGTTGGTGGCAACGAATATGATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR-3UTR CAA 90 bp CACTGGTGGGCAGCAGCATCGAAGGGTATAAAGACATTTACACATTTTCCCTGGACGCCCTCTGCCAATTaGCCATTGGCAATCATATTC +
Preference number: 3 (lower is better)
Translates to: HWWAAASKGIKTFTHFPWTPSAN*PLAIIF
Trigger: GAATATGATTGCCAATGGCAAATTGGCAGAGGGCGT...CCAGGGAAAATGTGTAAATGTCTTTATACCCTTCGATGCTGCTGCCCACCAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497136.6
3UTR-3UTR CAA 90 bp GCCTTAAAACATCGGCACACTCCTCAGGATTCAAACGGACTTTTGCCAGCCATGGATGCTTATGTGCTTTaGGGCACACATAGTCTTAGA +
Preference number: 3 (lower is better)
Translates to: ALKHRHTPQDSNGLLPAMDAYVL*GTHSLR
Trigger: TCTAAGACTATGTGTGCCCAAAAGCACATAAGCATC...CATGGCTGGCAAAAGTCCGTTTGAATCCTGAGGAGTGTGCCGATGTTTTAAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR-3UTR CAA 90 bp CTACCCATACTTCCATCTGGTGGAATCCGAGCACTGTCTTTTACTGAGTTTCCTTGGATGCTTAACTCTTaGTGTAGCAGACCACTGGTG +
Preference number: 3 (lower is better)
Translates to: LPILPSGGIRALSFTEFPWMLNS*CSRPLV
Trigger: CACCAGTGGTCTGCTACACAAAGAGTTAAGCATCCA...AGGAAACTCAGTAAAAGACAGTGCTCGGATTCCACCAGATGGAAGTATGGGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR-3UTR CAA 90 bp TCACTGGTGGGCAGCAGCATCGAAGGGTATAAAGACATTTACACATTTTCCCTGGCTGGTTATCTGCACTaGTTTCCAACAGCAACTGCA +
Preference number: 3 (lower is better)
Translates to: SLVGSSIEGYKDIYTFSLAGYLH*FPTATA
Trigger: TGCAGTTGCTGTTGGAAACAAGTGCAGATAACCAGC...CAGGGAAAATGTGTAAATGTCTTTATACCCTTCGATGCTGCTGCCCACCAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497136.6
3UTR CCA 72 bp CTTATGTGCTTTTGGGCACACATAGTCTTAGAACAGTaGTCAAACAGCTCACAGGACCCTGTACTCCTCTTC +
Preference number: 3 (lower is better)
Translates to: LMCFWAHIVLEQ*SNSSQDPVLLF
Trigger: GAAGAGGAGTACAGGGTCCTGTGAGCTGTTTGACCACTGTTCTAAGACTATGTGTGCCCAAAAGCACATAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
3UTR CCA 72 bp GGCATTTTCACAGAGCACGTCATAGCATATATCCAGTaGGTTGCTCAGTTTGTCTCGAGGAGCAGCTTCTTT +
Preference number: 3 (lower is better)
Translates to: GIFTEHVIAYIQ*VAQFVSRSSFF
Trigger: AAAGAAGCTGCTCCTCGAGACAAACTGAGCAACCCACTGGATATATGCTATGACGTGCTCTGTGAAAATGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR-3UTR CAA 90 bp CACTGGTGGGCAGCAGCATCGAAGGGTATAAAGACATTTACACATTTTCCCTGGCTCACTAATCCCATATaGTTTGGTGTTGAGGTAGCA +
Preference number: 3 (lower is better)
Translates to: HWWAAASKGIKTFTHFPWLTNPI*FGVEVA
Trigger: TGCTACCTCAACACCAAACAATATGGGATTAGTGAG...CCAGGGAAAATGTGTAAATGTCTTTATACCCTTCGATGCTGCTGCCCACCAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497136.6
3UTR-3UTR CAA 90 bp GTAGGCATTTTCACAGAGCACGTCATAGCATATATCCAGTGGGTTGCTCAGTTTCTCTCGAGTTGCAAGTaGCTTCTTTCTCAGGCTCTT +
Preference number: 3 (lower is better)
Translates to: VGIFTEHVIAYIQWVAQFLSSCK*LLSQAL
Trigger: AAGAGCCTGAGAAAGAAGCAACTTGCAACTCGAGAG...AAACTGAGCAACCCACTGGATATATGCTATGACGTGCTCTGTGAAAATGCCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR TCA 72 bp GTTGCAAGTTGCTTCTTTCTCAGGCTCTTCAAGTTGTaGGATGGTGACCACTCCAAAGCAGTTATTGTAGGG +
Preference number: 3 (lower is better)
Translates to: VASCFFLRLFKL*DGDHSKAVIVG
Trigger: CCCTACAATAACTGCTTTGGAGTGGTCACCATCTCACAACTTGAAGAGCCTGAGAAAGAAGCAACTTGCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR TCA 72 bp ACTTCCATCTGGTGGAATCCGAGCACTGTCTTTTACTaGGTTTCCTTCAACAGTGAGATGATACACTTGGCC +
Preference number: 3 (lower is better)
Translates to: TSIWWNPSTVFY*VSFNSEMIHLA
Trigger: GGCCAAGTGTATCATCTCACTGTTGAAGGAAACTCAGTAAAAGACAGTGCTCGGATTCCACCAGATGGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR-3UTR CAA 90 bp CTTCAATGGGTTCTTCCTTGGGGGACTCAAGCTCATTCAATAAGTCTTTGCCAGGATGCTTATGTGCTTTaGGGCACACATAGTCTTAGA +
Preference number: 3 (lower is better)
Translates to: LQWVLPWGTQAHSISLCQDAYVL*GTHSLR
Trigger: TCTAAGACTATGTGTGCCCAAAAGCACATAAGCATC...CTGGCAAAGACTTATTGAATGAGCTTGAGTCCCCCAAGGAAGAACCCATTGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR-3UTR CAA 90 bp CTGCTTAAAACCGAGGTTCTTCAAACTCCGGGCATAATCTGCATATATAGCAGTTGGATGCTTAACTCTTaGTGTAGCAGACCACTGGTG +
Preference number: 3 (lower is better)
Translates to: LLKTEVLQTPGIICIYSSWMLNS*CSRPLV
Trigger: CACCAGTGGTCTGCTACACAAAGAGTTAAGCATCCA...ACTGCTATATATGCAGATTATGCCCGGAGTTTGAAGAACCTCGGTTTTAAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR-3UTR CAA 90 bp TGCCTCTTTCACCACGAAAAGCAATGCTCCTACCTGTTGGAAGATCAACCAGTTCTCACTAATCCCATATaGTTTGGTGTTGAGGTAGCA +
Preference number: 3 (lower is better)
Translates to: CLFHHEKQCSYLLEDQPVLTNPI*FGVEVA
Trigger: TGCTACCTCAACACCAAACAATATGGGATTAGTGAG...AACTGGTTGATCTTCCAACAGGTAGGAGCATTGCTTTTCGTGGTGAAAGAGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR-3UTR CAA 90 bp CTACCCATACTTCCATCTGGTGGAATCCGAGCACTGTCTTTTACTGAGTTTCCTATGGCAGATTCATCATaGCCTCTTTCACCACGAAAA +
Preference number: 3 (lower is better)
Translates to: LPILPSGGIRALSFTEFPMADSS*PLSPRK
Trigger: TTTTCGTGGTGAAAGAGGCAATGATGAATCTGCCAT...AGGAAACTCAGTAAAAGACAGTGCTCGGATTCCACCAGATGGAAGTATGGGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR-3UTR CAA 90 bp TTACCAGGAGCAAAACGAATCTTCCTCACCCAACTTCGGTGTGTGGGTATTCCTATTGTAGGGAAGTTTTaGGACATCTCTCTAAGAAGG +
Preference number: 3 (lower is better)
Translates to: LPGAKRIFLTQLRCVGIPIVGKF*DISLRR
Trigger: CCTTCTTAGAGAGATGTCCAAAAACTTCCCTACAAT...AGGAATACCCACACACCGAAGTTGGGTGAGGAAGATTCGTTTTGCTCCTGGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR TCA 72 bp TCGGTAAATACAAAATGTTCCCGGGCAGAGATGTTCTaGCTAAGTTCAGATTTACTTTCTGCCTCCTGCAGC +
Preference number: 3 (lower is better)
Translates to: SVNTKCSRAEMF*LSSDLLSASCS
Trigger: GCTGCAGGAGGCAGAAAGTAAATCTGAACTTAGTCAGAACATCTCTGCCCGGGAACATTTTGTATTTACCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR TCA 72 bp GTATACTTCTCCTTTCACTTTACACATCGAGTACCATaGCCTGCTAGAACCGCGAGAGAACATGAAGTGACT +
Preference number: 3 (lower is better)
Translates to: VYFSFHFTHRVP*PARTAREHEVT
Trigger: AGTCACTTCATGTTCTCTCGCGGTTCTAGCAGGTCATGGTACTCGATGTGTAAAGTGAAAGGAGAAGTATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497136.6
3UTR TCA 72 bp AGAGCCTTGAAACAAGCAGGCACCTCTGCAAGAGAGTaGATTCTGGATCAAGCAACAGTTTCTTTATGTCAT +
Preference number: 3 (lower is better)
Translates to: RALKQAGTSARE*ILDQATVSLCH
Trigger: ATGACATAAAGAAACTGTTGCTTGATCCAGAATTCACTCTCTTGCAGAGGTGCCTGCTTGTTTCAAGGCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR GCA 72 bp ACCAGTCCACATCCAATATACGAAAGGTCACATTTCTaGCACTTCTTAAACTGCTCACCATCTGAACCTCTT +
Preference number: 3 (lower is better)
Translates to: TSPHPIYERSHF*HFLNCSPSEPL
Trigger: AAGAGGTTCAGATGGTGAGCAGTTTAAGAAGTGGCAGAAATGTGACCTTTCGTATATTGGATGTGGACTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR GCA 72 bp CTTAAAACCGAGGTTCTTCAAACTCCGGGCATAATCTaGATATATAGCAGTGATGAGTTTCTCTGTGTCCTC +
Preference number: 3 (lower is better)
Translates to: LKTEVLQTPGII*IYSSDEFLCVL
Trigger: GAGGACACAGAGAAACTCATCACTGCTATATATGCAGATTATGCCCGGAGTTTGAAGAACCTCGGTTTTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR CCA 72 bp AAACTTGTCCATTCAATACCCTTGACTTCACATGAGTaGATGCTTAACTCTTTGTGTAGCAGACCACTGGTG +
Preference number: 3 (lower is better)
Translates to: KLVHSIPLTSHE*MLNSLCSRPLV
Trigger: CACCAGTGGTCTGCTACACAAAGAGTTAAGCATCCACTCATGTGAAGTCAAGGGTATTGAATGGACAAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR-3UTR CAA 90 bp AAACTTACTCTCAACATAGATGCTTATGTGCTTTTGGGCACACATAGTCTTAGACATATATCCAGTGGGTaGCTCAGTTTGTCTCGAGGA +
Preference number: 3 (lower is better)
Translates to: KLTLNIDAYVLLGTHSLRHISSG*LSLSRG
Trigger: TCCTCGAGACAAACTGAGCAACCCACTGGATATATG...TCTAAGACTATGTGTGCCCAAAAGCACATAAGCATCTATGTTGAGAGTAAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR TCA 72 bp AGATATGACAAGTGCCCATGTACCCCTGTCCAGAGTTaGCAAGTAATCTTTTGTCATATTTCCGTAATCTAC +
Preference number: 3 (lower is better)
Translates to: RYDKCPCTPVQS*QVIFCHISVIY
Trigger: GTAGATTACGGAAATATGACAAAAGATTACTTGTCAACTCTGGACAGGGGTACATGGGCACTTGTCATATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497136.6
3UTR-3UTR CAA 90 bp AAACTTACTCTCAACATAGATGCTTATGTGCTTTTGGGCACACATAGTCTTAGAATGGCAGATTCATCATaGCCTCTTTCACCACGAAAA +
Preference number: 3 (lower is better)
Translates to: KLTLNIDAYVLLGTHSLRMADSS*PLSPRK
Trigger: TTTTCGTGGTGAAAGAGGCAATGATGAATCTGCCAT...TCTAAGACTATGTGTGCCCAAAAGCACATAAGCATCTATGTTGAGAGTAAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR TCA 72 bp AAAGCAATGCTCCTACCTGTTGGAAGATCAACCAGTTaGAGTTCATTTCTCACTAATCCCATATTGTTTGGT +
Preference number: 3 (lower is better)
Translates to: KAMLLPVGRSTS*SSFLTNPILFG
Trigger: ACCAAACAATATGGGATTAGTGAGAAATGAACTTCAACTGGTTGATCTTCCAACAGGTAGGAGCATTGCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR GCA 72 bp CTTCCACAAATAAGGCTGCTCTATCAAAGTATCTCATaGTGCTCAACAGAACAAAACAAGAGTTATGCTTTG +
Preference number: 3 (lower is better)
Translates to: LPQIRLLYQSIS*CSTEQNKSYAL
Trigger: CAAAGCATAACTCTTGTTTTGTTCTGTTGAGCAGCATGAGATACTTTGATAGAGCAGCCTTATTTGTGGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497136.6
3UTR CCA 72 bp AACAAAACAAGAGTTATGCTTTGTGATTTACATCACTaGTGGGCAGCAGCATCGAAGGGTATAAAGACATTT +
Preference number: 3 (lower is better)
Translates to: NKTRVMLCDLHH*WAAASKGIKTF
Trigger: AAATGTCTTTATACCCTTCGATGCTGCTGCCCACCAGTGATGTAAATCACAAAGCATAACTCTTGTTTTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497136.6
3UTR-3UTR CAA 90 bp AAACTTACTCTCAACATAGATGCTTATGTGCTTTTGGGCACACATAGTCTTAGAATTGTAGGGAAGTTTTaGGACATCTCTCTAAGAAGG +
Preference number: 3 (lower is better)
Translates to: KLTLNIDAYVLLGTHSLRIVGKF*DISLRR
Trigger: CCTTCTTAGAGAGATGTCCAAAAACTTCCCTACAAT...TCTAAGACTATGTGTGCCCAAAAGCACATAAGCATCTATGTTGAGAGTAAGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR TCA 72 bp TATTTCCGTAATCTACCTCCCTTAGTTTTGAATAAATaGAATGCTCCACAATTAGTGATGGTTGTTCCTCTT +
Preference number: 3 (lower is better)
Translates to: YFRNLPPLVLNK*NAPQLVMVVPL
Trigger: AAGAGGAACAACCATCACTAATTGTGGAGCATTTCATTTATTCAAAACTAAGGGAGGTAGATTACGGAAATA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497136.6
CDS-3UTR CCA 90 bp TCACAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACGGTGGCCACAGCCAGGGCCAGCCCAGGACCTaGGCGCTGACCCGCAACCAG +
Preference number: 4 (lower is better)
Translates to: SQDPVLLFILDCDGGHSQGQPRT*ALTRNQ
Trigger: CTGGTTGCGGGTCAGCGCCCAGGTCCTGGGCTGGCC...CTGGCTGTGGCCACCGTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTGTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263461.11
ENST00000605543.5
CDS-3UTR CCA 90 bp GCTCACAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACGGTGGCCACAGCCACCGCCGCCTTGTTGTaGGCGTTGAGGGCCCCCGTG +
Preference number: 4 (lower is better)
Translates to: AHRTLYSSSSWTVTVATATAALL*ALRAPV
Trigger: CACGGGGGCCCTCAACGCCCACAACAAGGCGGCGGT...GGCTGTGGCCACCGTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTGTGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263461.11
ENST00000605543.5
CDS-3UTR CCA 90 bp TCACAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACGGTGGCCACAGCCAGACCGCCGCCTTGTTGTaGGCGTTGAGGGCCCCCGTG +
Preference number: 4 (lower is better)
Translates to: SQDPVLLFILDCDGGHSQTAALL*ALRAPV
Trigger: CACGGGGGCCCTCAACGCCCACAACAAGGCGGCGGT...CTGGCTGTGGCCACCGTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTGTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263461.11
ENST00000605543.5
CDS-3UTR CCA 90 bp CAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACGGTGGCCACAGCCAGACCCGGTCTGGCGGGCCATaGCCTCTCGAGTTGCAAGTT +
Preference number: 4 (lower is better)
Translates to: QDPVLLFILDCDGGHSQTRSGGP*PLELQV
Trigger: AACTTGCAACTCGAGAGGCCATGGCCCGCCAGACCG...GGTCTGGCTGTGGCCACCGTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR TCA 90 bp CAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACGGTGGCCACAGCCAGACCCCGTCAGCAGGAACTTaGGGTGCACTTCCCGCAGAA +
Preference number: 4 (lower is better)
Translates to: QDPVLLFILDCDGGHSQTPSAGT*GALPAE
Trigger: TTCTGCGGGAAGTGCACCTCAAGTTCCTGCTGACGG...GGTCTGGCTGTGGCCACCGTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263461.11
ENST00000497136.6
CDS-3UTR CCA 90 bp TCACAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACGGTGGCCACAGCCAGCGGTCTGGCGGGCCATaGCCTCTCGAGTTGCAAGTT +
Preference number: 4 (lower is better)
Translates to: SQDPVLLFILDCDGGHSQRSGGP*PLELQV
Trigger: AACTTGCAACTCGAGAGGCCATGGCCCGCCAGACCG...CTGGCTGTGGCCACCGTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR TCA 90 bp GCATATATCCAGTGGGTTGCTCAGTTTGTCTCGAGGAGCAGCTTCTTTAGGAGCCCAGGACCTGGGCGCTaGCCCGCAACCAGGAAGCGG +
Preference number: 4 (lower is better)
Translates to: AYIQWVAQFVSRSSFFRSPGPGR*PATRKR
Trigger: CCGCTTCCTGGTTGCGGGTCAGCGCCCAGGTCCTGG...GCTCCTAAAGAAGCTGCTCCTCGAGACAAACTGAGCAACCCACTGGATATATGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605543.5
CDS-3UTR TCA 90 bp TCACAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACGGTGGCCACAGCCAGTGCGCGCCGACACCTTaGAGTTCACTGTGTAGGGCA +
Preference number: 4 (lower is better)
Translates to: SQDPVLLFILDCDGGHSQCAPTP*SSLCRA
Trigger: TGCCCTACACAGTGAACTTCAAGGTGTCGGCGCGCA...CTGGCTGTGGCCACCGTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263461.11
ENST00000605543.5
CDS-3UTR TCA 90 bp GCTCACAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACGGTGGCCACAGCCGTAGCAGACCACTGGTaGGATGGTACACCAGGACAG +
Preference number: 4 (lower is better)
Translates to: AHRTLYSSSSWTVTVATAVADHW*DGTPGQ
Trigger: CTGTCCTGGTGTACCATCTCACCAGTGGTCTGCTAC...GGCTGTGGCCACCGTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTGTGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR TCA 90 bp AGCTCACAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACGGTGGCCACAGCAACTTAATGGTGCTCTaGGAGGGGCCTGACGAGGTG +
Preference number: 4 (lower is better)
Translates to: SSQDPVLLFILDCDGGHSNLMVL*EGPDEV
Trigger: CACCTCGTCAGGCCCCTCTCAGAGCACCATTAAGTT...GCTGTGGCCACCGTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTGTGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR TCA 90 bp GCTCACAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACGGTGGCCACAGCCATCAGGCAGAGCAACTaGACGCCCTCTGCCAATTTG +
Preference number: 4 (lower is better)
Translates to: AHRTLYSSSSWTVTVATAIRQSN*TPSANL
Trigger: CAAATTGGCAGAGGGCGTTCAGTTGCTCTGCCTGAT...GGCTGTGGCCACCGTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTGTGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR TCA 90 bp TCACAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACGGTGGCCACAGCCAGCCTGAGCAGCCCATGTaGACTCTCGGTTTACCTGTG +
Preference number: 4 (lower is better)
Translates to: SQDPVLLFILDCDGGHSQPEQPM*TLGLPV
Trigger: CACAGGTAAACCGAGAGTTCACATGGGCTGCTCAGG...CTGGCTGTGGCCACCGTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497136.6
CDS-3UTR CCA 90 bp CAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACGGTGGCCACAGCCAGACCTACTCCTCTTCATCCTaGACTGTGACGGTGGCCACA +
Preference number: 4 (lower is better)
Translates to: QDPVLLFILDCDGGHSQTYSSSS*TVTVAT
Trigger: TGTGGCCACCGTCACAGTCCAGGATGAAGAGGAGTA...GGTCTGGCTGTGGCCACCGTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR TCA 90 bp CAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACGGTGGCCACAGCCAGACCCACTTCCCGCAGAATTaGACCTCTGGGATGTTCTTC +
Preference number: 4 (lower is better)
Translates to: QDPVLLFILDCDGGHSQTHFPQN*TSGMFF
Trigger: GAAGAACATCCCAGAGGTTCAATTCTGCGGGAAGTG...GGTCTGGCTGTGGCCACCGTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263461.11
ENST00000497136.6
CDS-3UTR TCA 90 bp CAGTGGTCAAACAGCTCACAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACACTCAGCTCTGTGTCTaGGACTACGGTCTGGCGGGC +
Preference number: 4 (lower is better)
Translates to: QWSNSSQDPVLLFILDCDTQLCV*DYGLAG
Trigger: GCCCGCCAGACCGTAGTCTCAGACACAGAGCTGAGT...GTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTGTGAGCTGTTTGACCACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR TCA 90 bp GCTCACAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACGGTGGCCACAGCCACATCTCTAGGACTCTaGTGCACCCATCATCTGAGG +
Preference number: 4 (lower is better)
Translates to: AHRTLYSSSSWTVTVATATSLGL*CTHHLR
Trigger: CCTCAGATGATGGGTGCATCAGAGTCCTAGAGATGT...GGCTGTGGCCACCGTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTGTGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR GCA 90 bp CAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACGGTGGCCACAGCCAGACCTCCTGTGCGTTCTATTaGAATCACACCCACCGTCTG +
Preference number: 4 (lower is better)
Translates to: QDPVLLFILDCDGGHSQTSCAFY*NHTHRL
Trigger: CAGACGGTGGGTGTGATTGCAATAGAACGCACAGGA...GGTCTGGCTGTGGCCACCGTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263461.11
ENST00000497136.6
CDS-3UTR GCA 90 bp CAGTGGTCAAACAGCTCACAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACGTCTCCACCTCACCATaGCTTCTGTCGCCTCTCCCC +
Preference number: 4 (lower is better)
Translates to: QWSNSSQDPVLLFILDCDVSTSP*LLSPLP
Trigger: GGGGAGAGGCGACAGAAGGCATGGTGAGGTGGAGAC...GTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTGTGAGCTGTTTGACCACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497136.6
CDS-3UTR CCA 90 bp CAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACGGTGGCCACAGCCAGACCAGACCACTGGTGAGATaGTACACCAGGACAGAACCA +
Preference number: 4 (lower is better)
Translates to: QDPVLLFILDCDGGHSQTRPLVR*YTRTEP
Trigger: TGGTTCTGTCCTGGTGTACCATCTCACCAGTGGTCT...GGTCTGGCTGTGGCCACCGTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR CCA 90 bp GCTCACAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACGGTGGCCACAGCCAGACCACTGGTGAGATaGTACACCAGGACAGAACCA +
Preference number: 4 (lower is better)
Translates to: AHRTLYSSSSWTVTVATARPLVR*YTRTEP
Trigger: TGGTTCTGTCCTGGTGTACCATCTCACCAGTGGTCT...GGCTGTGGCCACCGTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTGTGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR CCA 90 bp GCTCACAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACGGTGGCCACAGCCACCCATACTTCCATCTaGTGGAATCCGAGCACTGTC +
Preference number: 4 (lower is better)
Translates to: AHRTLYSSSSWTVTVATATHTSI*WNPSTV
Trigger: GACAGTGCTCGGATTCCACCAGATGGAAGTATGGGT...GGCTGTGGCCACCGTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTGTGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR TCA 90 bp AGCTCACAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACGGTGGCCACAGCCGGTTTTTGTCACCCTaGTTGCATCACACTGGCTTC +
Preference number: 4 (lower is better)
Translates to: SSQDPVLLFILDCDGGHSRFLSP*LHHTGF
Trigger: GAAGCCAGTGTGATGCAATCAGGGTGACAAAAACCG...GCTGTGGCCACCGTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTGTGAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263461.11
ENST00000497136.6
CDS-3UTR TCA 90 bp TCACAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACGGTGGCCACAGCCAGACATCTCTAGGACTCTaGTGCACCCATCATCTGAGG +
Preference number: 4 (lower is better)
Translates to: SQDPVLLFILDCDGGHSQTSLGL*CTHHLR
Trigger: CCTCAGATGATGGGTGCATCAGAGTCCTAGAGATGT...CTGGCTGTGGCCACCGTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR TCA 90 bp TCACAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACGGTGGCCACAGCCAGAAGTATCTCATGCTGTaGAGCGTCTCTGCCACGCTA +
Preference number: 4 (lower is better)
Translates to: SQDPVLLFILDCDGGHSQKYLML*SVSATL
Trigger: TAGCGTGGCAGAGACGCTTCACAGCATGAGATACTT...CTGGCTGTGGCCACCGTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263461.11
ENST00000605543.5
CDS-3UTR GCA 90 bp CAGTGGTCAAACAGCTCACAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACGACTTTTGCCAGCCATaGAGCCCGATTCCACTCGCC +
Preference number: 4 (lower is better)
Translates to: QWSNSSQDPVLLFILDCDDFCQP*SPIPLA
Trigger: GGCGAGTGGAATCGGGCTGCATGGCTGGCAAAAGTC...GTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTGTGAGCTGTTTGACCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR CCA 90 bp CAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACGGTGGCCACAGCCAGACCTATTTAGAGCTTTCTTaGCACCTGTGGCTGTGGCCA +
Preference number: 4 (lower is better)
Translates to: QDPVLLFILDCDGGHSQTYLELS*HLWLWP
Trigger: TGGCCACAGCCACAGGTGCCAAGAAAGCTCTAAATA...GGTCTGGCTGTGGCCACCGTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263461.11
ENST00000497136.6
CDS-3UTR CCA 90 bp AGCTCACAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACGGTGGCCACAGCCCCAACTTCGGTGTGTaGGTATTCCTCTGGATACTC +
Preference number: 4 (lower is better)
Translates to: SSQDPVLLFILDCDGGHSPNFGV*VFLWIL
Trigger: GAGTATCCAGAGGAATACCCACACACCGAAGTTGGG...GCTGTGGCCACCGTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTGTGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR CCA 90 bp GCTCACAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACGGTGGCCACAGCCCAATGGGTTCTTCCTTaGGGGACTCAAGCTCATTCA +
Preference number: 4 (lower is better)
Translates to: AHRTLYSSSSWTVTVATAQWVLP*GTQAHS
Trigger: TGAATGAGCTTGAGTCCCCCAAGGAAGAACCCATTG...GGCTGTGGCCACCGTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTGTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR TCA 90 bp GCTCACAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACGGTGGCCACAGCCCAAGTTGTGAGATGGTaGCCACTCCAAAGCAGTTAT +
Preference number: 4 (lower is better)
Translates to: AHRTLYSSSSWTVTVATAQVVRW*PLQSSY
Trigger: ATAACTGCTTTGGAGTGGTCACCATCTCACAACTTG...GGCTGTGGCCACCGTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTGTGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR TCA 90 bp CAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACGGTGGCCACAGCCAGACCAAACTGCTCACCATCTaGACCTCTTTAGTATCCCAC +
Preference number: 4 (lower is better)
Translates to: QDPVLLFILDCDGGHSQTKLLTI*TSLVSH
Trigger: GTGGGATACTAAAGAGGTTCAGATGGTGAGCAGTTT...GGTCTGGCTGTGGCCACCGTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR TCA 90 bp GGTCTGGCGGGCCATGGCCTCTCGAGTTGCAAGTTGCTTCTTTCTCAGGCTCTTAAGTATCTCATGCTGTaGAGCGTCTCTGCCACGCTA +
Preference number: 4 (lower is better)
Translates to: GLAGHGLSSCKLLLSQALKYLML*SVSATL
Trigger: TAGCGTGGCAGAGACGCTTCACAGCATGAGATACTT...AAGAGCCTGAGAAAGAAGCAACTTGCAACTCGAGAGGCCATGGCCCGCCAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605543.5
CDS-3UTR GCA 90 bp GCTCACAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACGGTGGCCACAGCCTCTCGAGTTGCAAGTTaGTTCTTTCTCAGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: AHRTLYSSSSWTVTVATASRVAS*FFLRLF
Trigger: GAAGAGCCTGAGAAAGAAGCAACTTGCAACTCGAGA...GGCTGTGGCCACCGTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTGTGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR GCA 90 bp CAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACGGTGGCCACAGCCAGACCTCTCGAGTTGCAAGTTaGTTCTTTCTCAGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: QDPVLLFILDCDGGHSQTSRVAS*FFLRLF
Trigger: GAAGAGCCTGAGAAAGAAGCAACTTGCAACTCGAGA...GGTCTGGCTGTGGCCACCGTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR GCA 90 bp CAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACGGTGGCCACAGCCAGACCTTACTTTCTGCCTCCTaGAGCAAGCTGATCACAGAT +
Preference number: 4 (lower is better)
Translates to: QDPVLLFILDCDGGHSQTLLSAS*SKLITD
Trigger: ATCTGTGATCAGCTTGCTGCAGGAGGCAGAAAGTAA...GGTCTGGCTGTGGCCACCGTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR GCA 90 bp GCTCACAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACGGTGGCCACAGCCGACCGTTTCACTTCCTaGAGATTAACCCTTTCTAGC +
Preference number: 4 (lower is better)
Translates to: AHRTLYSSSSWTVTVATADRFTS*RLTLSS
Trigger: GCTAGAAAGGGTTAATCTGCAGGAAGTGAAACGGTC...GGCTGTGGCCACCGTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTGTGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR GCA 90 bp CAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACGGTGGCCACAGCCAGACCAAGAGAACTGCTCCCTaGTTAAAACCGAGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: QDPVLLFILDCDGGHSQTKRTAP*LKPRFF
Trigger: GAAGAACCTCGGTTTTAAGCAGGGAGCAGTTCTCTT...GGTCTGGCTGTGGCCACCGTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR CCA 90 bp TGGGCACACATAGTCTTAGAACAGTGGTCAAACAGCTCACAGGACCCTGTACTCTCTGAGACTACGGTCTaGCGGGCCATGGCCTCTCGA +
Preference number: 4 (lower is better)
Translates to: WAHIVLEQWSNSSQDPVLSETTV*RAMASR
Trigger: TCGAGAGGCCATGGCCCGCCAGACCGTAGTCTCAGA...GAGTACAGGGTCCTGTGAGCTGTTTGACCACTGTTCTAAGACTATGTGTGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR CCA 90 bp GGTCTGGCGGGCCATGGCCTCTCGAGTTGCAAGTTGCTTCTTTCTCAGGCTCTTACCCATACTTCCATCTaGTGGAATCCGAGCACTGTC +
Preference number: 4 (lower is better)
Translates to: GLAGHGLSSCKLLLSQALTHTSI*WNPSTV
Trigger: GACAGTGCTCGGATTCCACCAGATGGAAGTATGGGT...AAGAGCCTGAGAAAGAAGCAACTTGCAACTCGAGAGGCCATGGCCCGCCAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR CCA 90 bp CAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACGGTGGCCACAGCCAGACCCCAGGTCAGATTCCCTaGCATTTATTAAGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: QDPVLLFILDCDGGHSQTPGQIP*HLLSCH
Trigger: GTGACAGCTTAATAAATGCCAGGGAATCTGACCTGG...GGTCTGGCTGTGGCCACCGTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
3UTR CAA 72 bp TACGGTCTGGCGGGCCATGGCCTCTCGAGTTGCAAGTaGCTTCTTTCTCAGGCTCTTCAAGTTGTGAGATGG +
Preference number: 4 (lower is better)
Translates to: YGLAGHGLSSCK*LLSQALQVVRW
Trigger: CCATCTCACAACTTGAAGAGCCTGAGAAAGAAGCAACTTGCAACTCGAGAGGCCATGGCCCGCCAGACCGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR TCA 90 bp TGGGCACACATAGTCTTAGAACAGTGGTCAAACAGCTCACAGGACCCTGTACTCGTGGCCAGCTTGTTATaGGCTGGGCTAGAGTGTGGG +
Preference number: 4 (lower is better)
Translates to: WAHIVLEQWSNSSQDPVLVASLL*AGLECG
Trigger: CCCACACTCTAGCCCAGCTCATAACAAGCTGGCCAC...GAGTACAGGGTCCTGTGAGCTGTTTGACCACTGTTCTAAGACTATGTGTGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263461.11
ENST00000497136.6
CDS-3UTR TCA 90 bp TGGGCACACATAGTCTTAGAACAGTGGTCAAACAGCTCACAGGACCCTGTACTCCCGTCAGCAGGAACTTaGGGTGCACTTCCCGCAGAA +
Preference number: 4 (lower is better)
Translates to: WAHIVLEQWSNSSQDPVLPSAGT*GALPAE
Trigger: TTCTGCGGGAAGTGCACCTCAAGTTCCTGCTGACGG...GAGTACAGGGTCCTGTGAGCTGTTTGACCACTGTTCTAAGACTATGTGTGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263461.11
ENST00000497136.6
CDS-3UTR TCA 90 bp AGCTCACAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACGGTGGCCACAGCCAAGTTGTGAGATGGTaGCCACTCCAAAGCAGTTAT +
Preference number: 4 (lower is better)
Translates to: SSQDPVLLFILDCDGGHSQVVRW*PLQSSY
Trigger: ATAACTGCTTTGGAGTGGTCACCATCTCACAACTTG...GCTGTGGCCACCGTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTGTGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR TCA 90 bp GCTCACAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACGGTGGCCACAGCCCGGGCAGAGATGTTCTaGCTAAGTTCAGATTTACTT +
Preference number: 4 (lower is better)
Translates to: AHRTLYSSSSWTVTVATARAEMF*LSSDLL
Trigger: AAGTAAATCTGAACTTAGTCAGAACATCTCTGCCCG...GGCTGTGGCCACCGTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTGTGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR TCA 90 bp CAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACGGTGGCCACAGCCAGACCTGTATGATCATAAGTTaGCCGTTTCACTTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: QDPVLLFILDCDGGHSQTCMIIS*PFHFLQ
Trigger: CTGCAGGAAGTGAAACGGTCAACTTATGATCATACA...GGTCTGGCTGTGGCCACCGTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR TCA 90 bp CTTTCTGCCTCCTGCAGCAAGCTGATCACAGATGATTCAACAATACTCAGCTCTGCTCACGGGCAGGCCTaGGCAGCCCATGTGAACTCT +
Preference number: 4 (lower is better)
Translates to: LSASCSKLITDDSTILSSAHGQA*AAHVNS
Trigger: AGAGTTCACATGGGCTGCTCAGGCCTGCCCGTGAGC...AGAGCTGAGTATTGTTGAATCATCTGTGATCAGCTTGCTGCAGGAGGCAGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497136.6
CDS-3UTR GCA 90 bp AGCTCACAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACGGTGGCCACAGCCACCACGAAAAGCAATaGTCCTACCTGTTGGAAGAT +
Preference number: 4 (lower is better)
Translates to: SSQDPVLLFILDCDGGHSHHEKQ*SYLLED
Trigger: ATCTTCCAACAGGTAGGAGCATTGCTTTTCGTGGTG...GCTGTGGCCACCGTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTGTGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR GCA 90 bp GGTCTGGCGGGCCATGGCCTCTCGAGTTGCAAGTTGCTTCTTTCTCAGGCTCTTCATGGCCTCTCGAGTTaGAAGTTGCTTCTTTCTCAG +
Preference number: 4 (lower is better)
Translates to: GLAGHGLSSCKLLLSQALHGLSS*KLLLSQ
Trigger: CTGAGAAAGAAGCAACTTGCAACTCGAGAGGCCATG...AAGAGCCTGAGAAAGAAGCAACTTGCAACTCGAGAGGCCATGGCCCGCCAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR GCA 90 bp CAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACGGTGGCCACAGCCAGACCTTCAGATTTACTTTCTaGCTCCTGCAGCAAGCTGAT +
Preference number: 4 (lower is better)
Translates to: QDPVLLFILDCDGGHSQTFRFTF*LLQQAD
Trigger: ATCAGCTTGCTGCAGGAGGCAGAAAGTAAATCTGAA...GGTCTGGCTGTGGCCACCGTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR GCA 90 bp GCTCACAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACGGTGGCCACAGCCTTCAGATTTACTTTCTaGCTCCTGCAGCAAGCTGAT +
Preference number: 4 (lower is better)
Translates to: AHRTLYSSSSWTVTVATAFRFTF*LLQQAD
Trigger: ATCAGCTTGCTGCAGGAGGCAGAAAGTAAATCTGAA...GGCTGTGGCCACCGTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTGTGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR GCA 90 bp GGTCTGGCGGGCCATGGCCTCTCGAGTTGCAAGTTGCTTCTTTCTCAGGCTCTTCGCCCTCTGCCAATTTaGCATTGGCAATCATATTCG +
Preference number: 4 (lower is better)
Translates to: GLAGHGLSSCKLLLSQALRPLPI*HWQSYS
Trigger: CGAATATGATTGCCAATGGCAAATTGGCAGAGGGCG...AAGAGCCTGAGAAAGAAGCAACTTGCAACTCGAGAGGCCATGGCCCGCCAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR GCA 90 bp CCCTTGGAACAAGGAGATAGGGGCACCACACAGGCTCGGTTAACTCTTGTTCATGTAGCGGCAGGCGTCTaGAGCCTTATCTATCAGGCA +
Preference number: 4 (lower is better)
Translates to: PLEQGDRGTTQARLTLVHVAAGV*SLIYQA
Trigger: TGCCTGATAGATAAGGCTGCAGACGCCTGCCGCTAC...ATGAACAAGAGTTAACCGAGCCTGTGTGGTGCCCCTATCTCCTTGTTCCAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR GCA 90 bp GCCTTAAAACATCGGCACACTCCTCAGGATTCAAACGGACTTTTGCCAGCCATGGACTTTTGCCAGCCATaGAGCCCGATTCCACTCGCC +
Preference number: 4 (lower is better)
Translates to: ALKHRHTPQDSNGLLPAMDFCQP*SPIPLA
Trigger: GGCGAGTGGAATCGGGCTGCATGGCTGGCAAAAGTC...CATGGCTGGCAAAAGTCCGTTTGAATCCTGAGGAGTGTGCCGATGTTTTAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR CCA 90 bp AGCTCACAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACGGTGGCCACAGCACCAACAGCCAGCAGTaGCTGATACATCTTGATGTT +
Preference number: 4 (lower is better)
Translates to: SSQDPVLLFILDCDGGHSTNSQQ*LIHLDV
Trigger: AACATCAAGATGTATCAGCCACTGCTGGCTGTTGGT...GCTGTGGCCACCGTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTGTGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR CCA 90 bp CACTGGTGGGCAGCAGCATCGAAGGGTATAAAGACATTTACACATTTTCCCTGGTCTGAGACTACGGTCTaGCGGGCCATGGCCTCTCGA +
Preference number: 4 (lower is better)
Translates to: HWWAAASKGIKTFTHFPWSETTV*RAMASR
Trigger: TCGAGAGGCCATGGCCCGCCAGACCGTAGTCTCAGA...CCAGGGAAAATGTGTAAATGTCTTTATACCCTTCGATGCTGCTGCCCACCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497136.6
CDS-3UTR CCA 90 bp TCACAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACGGTGGCCACAGCCAGCATACTTCCATCTGGTaGAATCCGAGCACTGTCTTT +
Preference number: 4 (lower is better)
Translates to: SQDPVLLFILDCDGGHSQHTSIW*NPSTVF
Trigger: AAAGACAGTGCTCGGATTCCACCAGATGGAAGTATG...CTGGCTGTGGCCACCGTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR CCA 90 bp TCACAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACGGTGGCCACAGCCAGCCCAAGAGCAGTAGCTaGTCTGTACATTTCCTTGTA +
Preference number: 4 (lower is better)
Translates to: SQDPVLLFILDCDGGHSQPKSSS*SVHFLV
Trigger: TACAAGGAAATGTACAGACCAGCTACTGCTCTTGGG...CTGGCTGTGGCCACCGTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR TCA 90 bp TCAACCCACCGCCTTAAAACATCGGCACACTCCTCAGGATTCAAACGGACTTTTGTGGCCAGCTTGTTATaGGCTGGGCTAGAGTGTGGG +
Preference number: 4 (lower is better)
Translates to: STHRLKTSAHSSGFKRTFVASLL*AGLECG
Trigger: CCCACACTCTAGCCCAGCTCATAACAAGCTGGCCAC...AAAAGTCCGTTTGAATCCTGAGGAGTGTGCCGATGTTTTAAGGCGGTGGGTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497136.6
CDS-3UTR TCA 90 bp TTGACTTCACATGAGTGGATGCTTAACTCTTTGTGTAGCAGACCACTGGTGAGATGGTGCGGGCAGTCCTaGAAGCAGTCCCGTCAGCAG +
Preference number: 4 (lower is better)
Translates to: LTSHEWMLNSLCSRPLVRWCGQS*KQSRQQ
Trigger: CTGCTGACGGGACTGCTTTCAGGACTGCCCGCACCA...TCTCACCAGTGGTCTGCTACACAAAGAGTTAAGCATCCACTCATGTGAAGTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR TCA 90 bp GCCTTAAAACATCGGCACACTCCTCAGGATTCAAACGGACTTTTGCCAGCCATGGTAGCAGACCACTGGTaGGATGGTACACCAGGACAG +
Preference number: 4 (lower is better)
Translates to: ALKHRHTPQDSNGLLPAMVADHW*DGTPGQ
Trigger: CTGTCCTGGTGTACCATCTCACCAGTGGTCTGCTAC...CATGGCTGGCAAAAGTCCGTTTGAATCCTGAGGAGTGTGCCGATGTTTTAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR TCA 90 bp GGTCTGGCGGGCCATGGCCTCTCGAGTTGCAAGTTGCTTCTTTCTCAGGCTCTTTCCATTCAATACCCTTaGCTTCACATGAGTGGATGC +
Preference number: 4 (lower is better)
Translates to: GLAGHGLSSCKLLLSQALSIQYP*LHMSGC
Trigger: GCATCCACTCATGTGAAGTCAAGGGTATTGAATGGA...AAGAGCCTGAGAAAGAAGCAACTTGCAACTCGAGAGGCCATGGCCCGCCAGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR TCA 90 bp AGCTCACAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACGGTGGCCACAGCCAAGCTGATCACAGATaGTTCAACAATACTCAGCTC +
Preference number: 4 (lower is better)
Translates to: SSQDPVLLFILDCDGGHSQADHR*FNNTQL
Trigger: GAGCTGAGTATTGTTGAATCATCTGTGATCAGCTTG...GCTGTGGCCACCGTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTGTGAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR TCA 90 bp CAGTGGTCAAACAGCTCACAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACATCACCATAGAGCCTTaGAACAAGCAGGCACCTCTG +
Preference number: 4 (lower is better)
Translates to: QWSNSSQDPVLLFILDCDITIEP*NKQAPL
Trigger: CAGAGGTGCCTGCTTGTTTCAAGGCTCTATGGTGAT...GTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTGTGAGCTGTTTGACCACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR GCA 90 bp CCCTTGGAACAAGGAGATAGGGGCACCACACAGGCTCGGTTAACTCTTGTTCATCACTACGAGGGCGGCTaGATTCTCATTGACAGGACA +
Preference number: 4 (lower is better)
Translates to: PLEQGDRGTTQARLTLVHHYEGG*ILIDRT
Trigger: TGTCCTGTCAATGAGAATGCAGCCGCCCTCGTAGTG...ATGAACAAGAGTTAACCGAGCCTGTGTGGTGCCCCTATCTCCTTGTTCCAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497136.6
CDS-3UTR GCA 90 bp TCACAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACGGTGGCCACAGCCAGTGGCAGATTCATCATTaGCTCTTTCACCACGAAAAG +
Preference number: 4 (lower is better)
Translates to: SQDPVLLFILDCDGGHSQWQIHH*LFHHEK
Trigger: CTTTTCGTGGTGAAAGAGGCAATGATGAATCTGCCA...CTGGCTGTGGCCACCGTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR GCA 90 bp CCCTTGGAACAAGGAGATAGGGGCACCACACAGGCTCGGTTAACTCTTGTTCATGCGACAGTCCAGAAGTaGAGCTCCGATTCATCACCA +
Preference number: 4 (lower is better)
Translates to: PLEQGDRGTTQARLTLVHATVQK*SSDSSP
Trigger: TGGTGATGAATCGGAGCTGCACTTCTGGACTGTCGC...ATGAACAAGAGTTAACCGAGCCTGTGTGGTGCCCCTATCTCCTTGTTCCAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR GCA 90 bp TCACAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACGGTGGCCACAGCCAGACTCCGGGCATAATCTaGATATATAGCAGTGATGAG +
Preference number: 4 (lower is better)
Translates to: SQDPVLLFILDCDGGHSQTPGII*IYSSDE
Trigger: CTCATCACTGCTATATATGCAGATTATGCCCGGAGT...CTGGCTGTGGCCACCGTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR CCA 90 bp TCAACCCACCGCCTTAAAACATCGGCACACTCCTCAGGATTCAAACGGACTTTTGGCCTGAGGGAGGCTTaGATGGGGAGAAGTCTGAGA +
Preference number: 4 (lower is better)
Translates to: STHRLKTSAHSSGFKRTFGLREA*MGRSLR
Trigger: TCTCAGACTTCTCCCCATCCAAGCCTCCCTCAGGCC...AAAAGTCCGTTTGAATCCTGAGGAGTGTGCCGATGTTTTAAGGCGGTGGGTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000497136.6
CDS-3UTR CCA 90 bp CAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACGGTGGCCACAGCCAGACCTTTTGTGGTCAACGGTaGACACATACGAATAGCAAA +
Preference number: 4 (lower is better)
Translates to: QDPVLLFILDCDGGHSQTFCGQR*THTNSK
Trigger: TTTGCTATTCGTATGTGTCCACCGTTGACCACAAAA...GGTCTGGCTGTGGCCACCGTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR CCA 90 bp TCACTGGTGGGCAGCAGCATCGAAGGGTATAAAGACATTTACACATTTTCCCTGCGGTCTGGCGGGCCATaGCCTCTCGAGTTGCAAGTT +
Preference number: 4 (lower is better)
Translates to: SLVGSSIEGYKDIYTFSLRSGGP*PLELQV
Trigger: AACTTGCAACTCGAGAGGCCATGGCCCGCCAGACCG...CAGGGAAAATGTGTAAATGTCTTTATACCCTTCGATGCTGCTGCCCACCAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497136.6
CDS-3UTR CCA 90 bp TGGGCACACATAGTCTTAGAACAGTGGTCAAACAGCTCACAGGACCCTGTACTCGGCAAGAGAGGCCCTTaGAACAAGGAGATAGGGGCA +
Preference number: 4 (lower is better)
Translates to: WAHIVLEQWSNSSQDPVLGKRGP*NKEIGA
Trigger: TGCCCCTATCTCCTTGTTCCAAGGGCCTCTCTTGCC...GAGTACAGGGTCCTGTGAGCTGTTTGACCACTGTTCTAAGACTATGTGTGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR CCA 90 bp GCATATATCCAGTGGGTTGCTCAGTTTGTCTCGAGGAGCAGCTTCTTTAGGAGCGGCAAGAGAGGCCCTTaGAACAAGGAGATAGGGGCA +
Preference number: 4 (lower is better)
Translates to: AYIQWVAQFVSRSSFFRSGKRGP*NKEIGA
Trigger: TGCCCCTATCTCCTTGTTCCAAGGGCCTCTCTTGCC...GCTCCTAAAGAAGCTGCTCCTCGAGACAAACTGAGCAACCCACTGGATATATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR CCA 90 bp AGCTCACAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACGGTGGCCACAGCTGTCCATTCCAAGGCTaGTGTAATAAGAAGGCTTTC +
Preference number: 4 (lower is better)
Translates to: SSQDPVLLFILDCDGGHSCPFQG*CNKKAF
Trigger: GAAAGCCTTCTTATTACACCAGCCTTGGAATGGACA...GCTGTGGCCACCGTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTGTGAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR CCA 90 bp AGCTCACAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACGGTGGCCACAGCATAGCATATATCCAGTaGGTTGCTCAGTTTGTCTCG +
Preference number: 4 (lower is better)
Translates to: SSQDPVLLFILDCDGGHSIAYIQ*VAQFVS
Trigger: CGAGACAAACTGAGCAACCCACTGGATATATGCTAT...GCTGTGGCCACCGTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTGTGAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR TCA 90 bp ACAAAACTTAGCAACTGCTTAAACCAAGGAATTAACGGTTCTGTGTTTTCAAGGCCAGGACCTGGGCGCTaGCCCGCAACCAGGAAGCGG +
Preference number: 4 (lower is better)
Translates to: TKLSNCLNQGINGSVFSRPGPGR*PATRKR
Trigger: CCGCTTCCTGGTTGCGGGTCAGCGCCCAGGTCCTGG...CCTTGAAAACACAGAACCGTTAATTCCTTGGTTTAAGCAGTTGCTAAGTTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263461.11
CDS-3UTR TCA 90 bp CATGGCCTCTCGAGTTGCAAGTTGCTTCTTTCTCAGGCTCTTCAAGTTGTGAGAAACTTAATGGTGCTCTaGGAGGGGCCTGACGAGGTG +
Preference number: 4 (lower is better)
Translates to: HGLSSCKLLLSQALQVVRNLMVL*EGPDEV
Trigger: CACCTCGTCAGGCCCCTCTCAGAGCACCATTAAGTT...TCTCACAACTTGAAGAGCCTGAGAAAGAAGCAACTTGCAACTCGAGAGGCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR TCA 90 bp AGCTCACAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACGGTGGCCACAGCCCTTTGATTTCTGATTaGCTTGTGGAGAACAAAGGT +
Preference number: 4 (lower is better)
Translates to: SSQDPVLLFILDCDGGHSPLISD*LVENKG
Trigger: ACCTTTGTTCTCCACAAGTCAATCAGAAATCAAAGG...GCTGTGGCCACCGTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTGTGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR TCA 90 bp AGCTCACAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACGGTGGCCACAGCAGAGCCTTTGATTTCTaGTTGACTTGTGGAGAACAA +
Preference number: 4 (lower is better)
Translates to: SSQDPVLLFILDCDGGHSRAFDF*LTCGEQ
Trigger: TTGTTCTCCACAAGTCAATCAGAAATCAAAGGCTCT...GCTGTGGCCACCGTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTGTGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR TCA 90 bp CACTGGTGGGCAGCAGCATCGAAGGGTATAAAGACATTTACACATTTTCCCTGGCTCTCGGTTTACCTGTaGAGCGTCTCTGCCACGCTA +
Preference number: 4 (lower is better)
Translates to: HWWAAASKGIKTFTHFPWLSVYL*SVSATL
Trigger: TAGCGTGGCAGAGACGCTTCACAGGTAAACCGAGAG...CCAGGGAAAATGTGTAAATGTCTTTATACCCTTCGATGCTGCTGCCCACCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497136.6
CDS-3UTR GCA 90 bp CAGTGGTCAAACAGCTCACAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACTCTTCCATAGTTTGGTaGCAGTGTCGGCATTCCAGA +
Preference number: 4 (lower is better)
Translates to: QWSNSSQDPVLLFILDCDSSIVW*QCRHSR
Trigger: TCTGGAATGCCGACACTGGCACCAAACTATGGAAGA...GTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTGTGAGCTGTTTGACCACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263461.11
ENST00000497136.6
CDS-3UTR GCA 90 bp AGCTCACAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACGGTGGCCACAGCCCAGCAATTGCACTTTaGCCAATCATGTTATCTAAG +
Preference number: 4 (lower is better)
Translates to: SSQDPVLLFILDCDGGHSPAIAL*PIMLSK
Trigger: CTTAGATAACATGATTGGGCAAAGTGCAATTGCTGG...GCTGTGGCCACCGTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTGTGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263461.11
CDS-3UTR GCA 90 bp GGTCTGGCGGGCCATGGCCTCTCGAGTTGCAAGTTGCTTCTTTCTCAGGCTCTTTTCCTCTGGATACTCTaGCTTTCAAGTCCCAGAAAT +
Preference number: 4 (lower is better)
Translates to: GLAGHGLSSCKLLLSQALFLWIL*LSSPRN
Trigger: ATTTCTGGGACTTGAAAGGCAGAGTATCCAGAGGAA...AAGAGCCTGAGAAAGAAGCAACTTGCAACTCGAGAGGCCATGGCCCGCCAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR GCA 90 bp CTTTCTGCCTCCTGCAGCAAGCTGATCACAGATGATTCAACAATACTCAGCTCTGACTTTTGCCAGCCATaGAGCCCGATTCCACTCGCC +
Preference number: 4 (lower is better)
Translates to: LSASCSKLITDDSTILSSDFCQP*SPIPLA
Trigger: GGCGAGTGGAATCGGGCTGCATGGCTGGCAAAAGTC...AGAGCTGAGTATTGTTGAATCATCTGTGATCAGCTTGCTGCAGGAGGCAGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR CCA 90 bp GCTCACAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACGGTGGCCACAGCCTTGACTTCACATGAGTaGATGCTTAACTCTTTGTGT +
Preference number: 4 (lower is better)
Translates to: AHRTLYSSSSWTVTVATALTSHE*MLNSLC
Trigger: ACACAAAGAGTTAAGCATCCACTCATGTGAAGTCAA...GGCTGTGGCCACCGTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTGTGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR CCA 90 bp CAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACGGTGGCCACAGCCAGACCCAAGAGAGTGAATTCTaGATCAAGCAACAGTTTCTT +
Preference number: 4 (lower is better)
Translates to: QDPVLLFILDCDGGHSQTQESEF*IKQQFL
Trigger: AAGAAACTGTTGCTTGATCCAGAATTCACTCTCTTG...GGTCTGGCTGTGGCCACCGTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR TCA 90 bp GTAGGCATTTTCACAGAGCACGTCATAGCATATATCCAGTGGGTTGCTCAGTTTTGCGCGCCGACACCTTaGAGTTCACTGTGTAGGGCA +
Preference number: 4 (lower is better)
Translates to: VGIFTEHVIAYIQWVAQFCAPTP*SSLCRA
Trigger: TGCCCTACACAGTGAACTTCAAGGTGTCGGCGCGCA...AAACTGAGCAACCCACTGGATATATGCTATGACGTGCTCTGTGAAAATGCCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000605543.5
CDS-3UTR TCA 90 bp CACTGGTGGGCAGCAGCATCGAAGGGTATAAAGACATTTACACATTTTCCCTGGATCACACCCACCGTCTaGTTCACCTCAAGGTCAAGG +
Preference number: 4 (lower is better)
Translates to: HWWAAASKGIKTFTHFPWITPTV*FTSRSR
Trigger: CCTTGACCTTGAGGTGAATCAGACGGTGGGTGTGAT...CCAGGGAAAATGTGTAAATGTCTTTATACCCTTCGATGCTGCTGCCCACCAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497136.6
CDS-3UTR TCA 90 bp CCCTTGGAACAAGGAGATAGGGGCACCACACAGGCTCGGTTAACTCTTGTTCATAGGCTCTTCAAGTTGTaGGATGGTGACCACTCCAAA +
Preference number: 4 (lower is better)
Translates to: PLEQGDRGTTQARLTLVHRLFKL*DGDHSK
Trigger: TTTGGAGTGGTCACCATCTCACAACTTGAAGAGCCT...ATGAACAAGAGTTAACCGAGCCTGTGTGGTGCCCCTATCTCCTTGTTCCAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR TCA 90 bp ATGCTTATGTGCTTTTGGGCACACATAGTCTTAGAACAGTGGTCAAACAGCTCAACTCAGCTCTGTGTCTaGGACTACGGTCTGGCGGGC +
Preference number: 4 (lower is better)
Translates to: MLMCFWAHIVLEQWSNSSTQLCV*DYGLAG
Trigger: GCCCGCCAGACCGTAGTCTCAGACACAGAGCTGAGT...TGAGCTGTTTGACCACTGTTCTAAGACTATGTGTGCCCAAAAGCACATAAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR TCA 90 bp CCCTTGGAACAAGGAGATAGGGGCACCACACAGGCTCGGTTAACTCTTGTTCATCCTCCTGCAGCAAGCTaGTCACAGATGATTCAACAA +
Preference number: 4 (lower is better)
Translates to: PLEQGDRGTTQARLTLVHPPAAS*SQMIQQ
Trigger: TTGTTGAATCATCTGTGATCAGCTTGCTGCAGGAGG...ATGAACAAGAGTTAACCGAGCCTGTGTGGTGCCCCTATCTCCTTGTTCCAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR TCA 90 bp TGGGCACACATAGTCTTAGAACAGTGGTCAAACAGCTCACAGGACCCTGTACTCACATCTCTAGGACTCTaGTGCACCCATCATCTGAGG +
Preference number: 4 (lower is better)
Translates to: WAHIVLEQWSNSSQDPVLTSLGL*CTHHLR
Trigger: CCTCAGATGATGGGTGCATCAGAGTCCTAGAGATGT...GAGTACAGGGTCCTGTGAGCTGTTTGACCACTGTTCTAAGACTATGTGTGCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR TCA 90 bp TGGGCACACATAGTCTTAGAACAGTGGTCAAACAGCTCACAGGACCCTGTACTCATCACCATAGAGCCTTaGAACAAGCAGGCACCTCTG +
Preference number: 4 (lower is better)
Translates to: WAHIVLEQWSNSSQDPVLITIEP*NKQAPL
Trigger: CAGAGGTGCCTGCTTGTTTCAAGGCTCTATGGTGAT...GAGTACAGGGTCCTGTGAGCTGTTTGACCACTGTTCTAAGACTATGTGTGCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR TCA 90 bp CAGTGGTCAAACAGCTCACAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACCATTCACGTTCTTTCTaGGACCAACGCAGGATACAA +
Preference number: 4 (lower is better)
Translates to: QWSNSSQDPVLLFILDCDHSRSF*DQRRIQ
Trigger: TTGTATCCTGCGTTGGTCTCAGAAAGAACGTGAATG...GTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTGTGAGCTGTTTGACCACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR GCA 90 bp AGTCTTAGAACAGTGGTCAAACAGCTCACAGGACCCTGTACTCCTCTTCATCCTCACTACGAGGGCGGCTaGATTCTCATTGACAGGACA +
Preference number: 4 (lower is better)
Translates to: SLRTVVKQLTGPCTPLHPHYEGG*ILIDRT
Trigger: TGTCCTGTCAATGAGAATGCAGCCGCCCTCGTAGTG...AGGATGAAGAGGAGTACAGGGTCCTGTGAGCTGTTTGACCACTGTTCTAAGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263461.11
ENST00000497136.6
CDS-3UTR GCA 90 bp AGCTCACAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACGGTGGCCACAGCATAATGCTGGTTATCTaGACTTGTTTCCAACAGCAA +
Preference number: 4 (lower is better)
Translates to: SSQDPVLLFILDCDGGHSIMLVI*TCFQQQ
Trigger: TTGCTGTTGGAAACAAGTGCAGATAACCAGCATTAT...GCTGTGGCCACCGTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTGTGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR GCA 90 bp CCCTTGGAACAAGGAGATAGGGGCACCACACAGGCTCGGTTAACTCTTGTTCATCGCCCTCTGCCAATTTaGCATTGGCAATCATATTCG +
Preference number: 4 (lower is better)
Translates to: PLEQGDRGTTQARLTLVHRPLPI*HWQSYS
Trigger: CGAATATGATTGCCAATGGCAAATTGGCAGAGGGCG...ATGAACAAGAGTTAACCGAGCCTGTGTGGTGCCCCTATCTCCTTGTTCCAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR CCA 90 bp AGTCTTAGAACAGTGGTCAAACAGCTCACAGGACCCTGTACTCCTCTTCATCCTCAGCTTGTTATGAGCTaGGCTAGAGTGTGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: SLRTVVKQLTGPCTPLHPQLVMS*ARVWAG
Trigger: TCCAGCCCACACTCTAGCCCAGCTCATAACAAGCTG...AGGATGAAGAGGAGTACAGGGTCCTGTGAGCTGTTTGACCACTGTTCTAAGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263461.11
ENST00000497136.6
CDS-3UTR CCA 90 bp CTAAGTTCAGATTTACTTTCTGCCTCCTGCAGCAAGCTGATCACAGATGATTCATCTGAGACTACGGTCTaGCGGGCCATGGCCTCTCGA +
Preference number: 4 (lower is better)
Translates to: LSSDLLSASCSKLITDDSSETTV*RAMASR
Trigger: TCGAGAGGCCATGGCCCGCCAGACCGTAGTCTCAGA...TGAATCATCTGTGATCAGCTTGCTGCAGGAGGCAGAAAGTAAATCTGAACTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR CCA 90 bp GCCTTAAAACATCGGCACACTCCTCAGGATTCAAACGGACTTTTGCCAGCCATGCCCAACTTCGGTGTGTaGGTATTCCTCTGGATACTC +
Preference number: 4 (lower is better)
Translates to: ALKHRHTPQDSNGLLPAMPNFGV*VFLWIL
Trigger: GAGTATCCAGAGGAATACCCACACACCGAAGTTGGG...CATGGCTGGCAAAAGTCCGTTTGAATCCTGAGGAGTGTGCCGATGTTTTAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR CCA 90 bp CTTTCTGCCTCCTGCAGCAAGCTGATCACAGATGATTCAACAATACTCAGCTCTGGCAAGAGAGGCCCTTaGAACAAGGAGATAGGGGCA +
Preference number: 4 (lower is better)
Translates to: LSASCSKLITDDSTILSSGKRGP*NKEIGA
Trigger: TGCCCCTATCTCCTTGTTCCAAGGGCCTCTCTTGCC...AGAGCTGAGTATTGTTGAATCATCTGTGATCAGCTTGCTGCAGGAGGCAGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR CCA 90 bp TGGGCACACATAGTCTTAGAACAGTGGTCAAACAGCTCACAGGACCCTGTACTCGCTGTCACTCTTCAATaGGTTCTTCCTTGGGGGACT +
Preference number: 4 (lower is better)
Translates to: WAHIVLEQWSNSSQDPVLAVTLQ*VLPWGT
Trigger: AGTCCCCCAAGGAAGAACCCATTGAAGAGTGACAGC...GAGTACAGGGTCCTGTGAGCTGTTTGACCACTGTTCTAAGACTATGTGTGCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR CCA 90 bp GCCTTAAAACATCGGCACACTCCTCAGGATTCAAACGGACTTTTGCCAGCCATGGCTGTCACTCTTCAATaGGTTCTTCCTTGGGGGACT +
Preference number: 4 (lower is better)
Translates to: ALKHRHTPQDSNGLLPAMAVTLQ*VLPWGT
Trigger: AGTCCCCCAAGGAAGAACCCATTGAAGAGTGACAGC...CATGGCTGGCAAAAGTCCGTTTGAATCCTGAGGAGTGTGCCGATGTTTTAAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR TCA 90 bp CTACCCATACTTCCATCTGGTGGAATCCGAGCACTGTCTTTTACTGAGTTTCCTCGGCTGCATTCTCATTaGCAGGACAGCACACCATAC +
Preference number: 4 (lower is better)
Translates to: LPILPSGGIRALSFTEFPRLHSH*QDSTPY
Trigger: GTATGGTGTGCTGTCCTGTCAATGAGAATGCAGCCG...AGGAAACTCAGTAAAAGACAGTGCTCGGATTCCACCAGATGGAAGTATGGGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497136.6
CDS-3UTR TCA 90 bp CCCTTGGAACAAGGAGATAGGGGCACCACACAGGCTCGGTTAACTCTTGTTCATCAAGATCACTTTATCTaGCGTACACCAGTCCACATC +
Preference number: 4 (lower is better)
Translates to: PLEQGDRGTTQARLTLVHQDHFI*RTPVHI
Trigger: GATGTGGACTGGTGTACGTCAGATAAAGTGATCTTG...ATGAACAAGAGTTAACCGAGCCTGTGTGGTGCCCCTATCTCCTTGTTCCAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR TCA 90 bp TTACCAGGAGCAAAACGAATCTTCCTCACCCAACTTCGGTGTGTGGGTATTCCTATCACCATAGAGCCTTaGAACAAGCAGGCACCTCTG +
Preference number: 4 (lower is better)
Translates to: LPGAKRIFLTQLRCVGIPITIEP*NKQAPL
Trigger: CAGAGGTGCCTGCTTGTTTCAAGGCTCTATGGTGAT...AGGAATACCCACACACCGAAGTTGGGTGAGGAAGATTCGTTTTGCTCCTGGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR TCA 90 bp TTGACTTCACATGAGTGGATGCTTAACTCTTTGTGTAGCAGACCACTGGTGAGAAACTTAATGGTGCTCTaGGAGGGGCCTGACGAGGTG +
Preference number: 4 (lower is better)
Translates to: LTSHEWMLNSLCSRPLVRNLMVL*EGPDEV
Trigger: CACCTCGTCAGGCCCCTCTCAGAGCACCATTAAGTT...TCTCACCAGTGGTCTGCTACACAAAGAGTTAAGCATCCACTCATGTGAAGTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR TCA 90 bp ATTAGTGATGGTTGTTCCTCTTCCAGATTTTCAGACGGGATGTCTCCACCTCACACACATCGAGTACCATaGCCTGCTAGAACCGCGAGA +
Preference number: 4 (lower is better)
Translates to: ISDGCSSSRFSDGMSPPHTHRVP*PARTAR
Trigger: TCTCGCGGTTCTAGCAGGTCATGGTACTCGATGTGT...GTGAGGTGGAGACATCCCGTCTGAAAATCTGGAAGAGGAACAACCATCACTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497136.6
CDS-3UTR GCA 90 bp CAGTGGTCAAACAGCTCACAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACTTCTTCCCCAGCAATTaGACTTTGCCCAATCATGTT +
Preference number: 4 (lower is better)
Translates to: QWSNSSQDPVLLFILDCDFFPSN*TLPNHV
Trigger: AACATGATTGGGCAAAGTGCAATTGCTGGGGAAGAA...GTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTGTGAGCTGTTTGACCACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263461.11
CDS-3UTR GCA 90 bp GCCTTAAAACATCGGCACACTCCTCAGGATTCAAACGGACTTTTGCCAGCCATGCATGGCCTCTCGAGTTaGAAGTTGCTTCTTTCTCAG +
Preference number: 4 (lower is better)
Translates to: ALKHRHTPQDSNGLLPAMHGLSS*KLLLSQ
Trigger: CTGAGAAAGAAGCAACTTGCAACTCGAGAGGCCATG...CATGGCTGGCAAAAGTCCGTTTGAATCCTGAGGAGTGTGCCGATGTTTTAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR GCA 90 bp TGGGCACACATAGTCTTAGAACAGTGGTCAAACAGCTCACAGGACCCTGTACTCATTCAAACGGACTTTTaGCAGCCATGCAGCCCGATT +
Preference number: 4 (lower is better)
Translates to: WAHIVLEQWSNSSQDPVLIQTDF*QPCSPI
Trigger: AATCGGGCTGCATGGCTGGCAAAAGTCCGTTTGAAT...GAGTACAGGGTCCTGTGAGCTGTTTGACCACTGTTCTAAGACTATGTGTGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR GCA 90 bp TCTCTGAAGACTTTTAAATTCCCTTTTACTAGGTGCCTGTTAAGTCTGATCAGCTGTCGCCTCTCCCCCTaGTCTCTGGGCCTCCTCTCA +
Preference number: 4 (lower is better)
Translates to: SLKTFKFPFTRCLLSLISCRLSP*SLGLLS
Trigger: TGAGAGGAGGCCCAGAGAGCAGGGGGAGAGGCGACA...GCTGATCAGACTTAACAGGCACCTAGTAAAAGGGAATTTAAAAGTCTTCAGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000497136.6
CDS-3UTR GCA 90 bp TTACCAGGAGCAAAACGAATCTTCCTCACCCAACTTCGGTGTGTGGGTATTCCTCAGAGATATGACAAGTaGCCATGTACCCCTGTCCAG +
Preference number: 4 (lower is better)
Translates to: LPGAKRIFLTQLRCVGIPQRYDK*PCTPVQ
Trigger: CTGGACAGGGGTACATGGGCACTTGTCATATCTCTG...AGGAATACCCACACACCGAAGTTGGGTGAGGAAGATTCGTTTTGCTCCTGGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497136.6
CDS-3UTR CCA 90 bp ATGCTTATGTGCTTTTGGGCACACATAGTCTTAGAACAGTGGTCAAACAGCTCAGGCCTGAGGGAGGCTTaGATGGGGAGAAGTCTGAGA +
Preference number: 4 (lower is better)
Translates to: MLMCFWAHIVLEQWSNSSGLREA*MGRSLR
Trigger: TCTCAGACTTCTCCCCATCCAAGCCTCCCTCAGGCC...TGAGCTGTTTGACCACTGTTCTAAGACTATGTGTGCCCAAAAGCACATAAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263461.11
ENST00000497136.6
CDS-3UTR CCA 90 bp CCCTTGGAACAAGGAGATAGGGGCACCACACAGGCTCGGTTAACTCTTGTTCATCCAGGTCAGATTCCCTaGCATTTATTAAGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: PLEQGDRGTTQARLTLVHPGQIP*HLLSCH
Trigger: GTGACAGCTTAATAAATGCCAGGGAATCTGACCTGG...ATGAACAAGAGTTAACCGAGCCTGTGTGGTGCCCCTATCTCCTTGTTCCAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR CCA 90 bp TGCCTCTTTCACCACGAAAAGCAATGCTCCTACCTGTTGGAAGATCAACCAGTTTACTCCTCTTCATCCTaGACTGTGACGGTGGCCACA +
Preference number: 4 (lower is better)
Translates to: CLFHHEKQCSYLLEDQPVYSSSS*TVTVAT
Trigger: TGTGGCCACCGTCACAGTCCAGGATGAAGAGGAGTA...AACTGGTTGATCTTCCAACAGGTAGGAGCATTGCTTTTCGTGGTGAAAGAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR TCA 90 bp CTACCCATACTTCCATCTGGTGGAATCCGAGCACTGTCTTTTACTGAGTTTCCTCACTTCCCGCAGAATTaGACCTCTGGGATGTTCTTC +
Preference number: 4 (lower is better)
Translates to: LPILPSGGIRALSFTEFPHFPQN*TSGMFF
Trigger: GAAGAACATCCCAGAGGTTCAATTCTGCGGGAAGTG...AGGAAACTCAGTAAAAGACAGTGCTCGGATTCCACCAGATGGAAGTATGGGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497136.6
CDS-3UTR TCA 90 bp AAACTTACTCTCAACATAGATGCTTATGTGCTTTTGGGCACACATAGTCTTAGATGGTGCGGGCAGTCCTaGAAGCAGTCCCGTCAGCAG +
Preference number: 4 (lower is better)
Translates to: KLTLNIDAYVLLGTHSLRWCGQS*KQSRQQ
Trigger: CTGCTGACGGGACTGCTTTCAGGACTGCCCGCACCA...TCTAAGACTATGTGTGCCCAAAAGCACATAAGCATCTATGTTGAGAGTAAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR TCA 90 bp TGGGCACACATAGTCTTAGAACAGTGGTCAAACAGCTCACAGGACCCTGTACTCCCAGGGGTTTATCTCTaGATACGACTGCCAAATACT +
Preference number: 4 (lower is better)
Translates to: WAHIVLEQWSNSSQDPVLPGVYL*IRLPNT
Trigger: AGTATTTGGCAGTCGTATTCAGAGATAAACCCCTGG...GAGTACAGGGTCCTGTGAGCTGTTTGACCACTGTTCTAAGACTATGTGTGCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR TCA 90 bp CATGGCCTCTCGAGTTGCAAGTTGCTTCTTTCTCAGGCTCTTCAAGTTGTGAGACCTCCTGCAGCAAGCTaGTCACAGATGATTCAACAA +
Preference number: 4 (lower is better)
Translates to: HGLSSCKLLLSQALQVVRPPAAS*SQMIQQ
Trigger: TTGTTGAATCATCTGTGATCAGCTTGCTGCAGGAGG...TCTCACAACTTGAAGAGCCTGAGAAAGAAGCAACTTGCAACTCGAGAGGCCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR TCA 90 bp TGGGCACACATAGTCTTAGAACAGTGGTCAAACAGCTCACAGGACCCTGTACTCAACCAGGAGAGCCTTTaGTTTCTGATTGACTTGTGG +
Preference number: 4 (lower is better)
Translates to: WAHIVLEQWSNSSQDPVLNQESL*FLIDLW
Trigger: CCACAAGTCAATCAGAAATCAAAGGCTCTCCTGGTT...GAGTACAGGGTCCTGTGAGCTGTTTGACCACTGTTCTAAGACTATGTGTGCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR TCA 90 bp CTAAGTTCAGATTTACTTTCTGCCTCCTGCAGCAAGCTGATCACAGATGATTCAAACCGCGAGAGAACATaGAGTGACTGCTCACGGGCA +
Preference number: 4 (lower is better)
Translates to: LSSDLLSASCSKLITDDSNRERT*SDCSRA
Trigger: TGCCCGTGAGCAGTCACTTCATGTTCTCTCGCGGTT...TGAATCATCTGTGATCAGCTTGCTGCAGGAGGCAGAAAGTAAATCTGAACTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497136.6
CDS-3UTR TCA 90 bp CATGGCCTCTCGAGTTGCAAGTTGCTTCTTTCTCAGGCTCTTCAAGTTGTGAGATGCTCTAGTCAAAGCTaGATGGACCCCAATTCTCTG +
Preference number: 4 (lower is better)
Translates to: HGLSSCKLLLSQALQVVRCSSQS*MDPNSL
Trigger: CAGAGAATTGGGGTCCATTCAGCTTTGACTAGAGCA...TCTCACAACTTGAAGAGCCTGAGAAAGAAGCAACTTGCAACTCGAGAGGCCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497136.6
CDS-3UTR GCA 90 bp CTTTCTGCCTCCTGCAGCAAGCTGATCACAGATGATTCAACAATACTCAGCTCTCTGAGCTACTCCTGCTaGTACATCCCAGACGATGAT +
Preference number: 4 (lower is better)
Translates to: LSASCSKLITDDSTILSSLSYSC*YIPDDD
Trigger: ATCATCGTCTGGGATGTAGCAGCAGGAGTAGCTCAG...AGAGCTGAGTATTGTTGAATCATCTGTGATCAGCTTGCTGCAGGAGGCAGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497136.6
CDS-3UTR GCA 90 bp GGTCTGGCGGGCCATGGCCTCTCGAGTTGCAAGTTGCTTCTTTCTCAGGCTCTTATTTCGATTACAAACTaGAGACTTGAGTTCCCATAT +
Preference number: 4 (lower is better)
Translates to: GLAGHGLSSCKLLLSQALISITN*RLEFPY
Trigger: ATATGGGAACTCAAGTCTGCAGTTTGTAATCGAAAT...AAGAGCCTGAGAAAGAAGCAACTTGCAACTCGAGAGGCCATGGCCCGCCAGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497136.6
CDS-3UTR GCA 90 bp TGGGCACACATAGTCTTAGAACAGTGGTCAAACAGCTCACAGGACCCTGTACTCCACCACGAAAAGCAATaGTCCTACCTGTTGGAAGAT +
Preference number: 4 (lower is better)
Translates to: WAHIVLEQWSNSSQDPVLHHEKQ*SYLLED
Trigger: ATCTTCCAACAGGTAGGAGCATTGCTTTTCGTGGTG...GAGTACAGGGTCCTGTGAGCTGTTTGACCACTGTTCTAAGACTATGTGTGCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR GCA 90 bp GCATATATCCAGTGGGTTGCTCAGTTTGTCTCGAGGAGCAGCTTCTTTAGGAGCTCTCGAGTTGCAAGTTaGTTCTTTCTCAGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: AYIQWVAQFVSRSSFFRSSRVAS*FFLRLF
Trigger: GAAGAGCCTGAGAAAGAAGCAACTTGCAACTCGAGA...GCTCCTAAAGAAGCTGCTCCTCGAGACAAACTGAGCAACCCACTGGATATATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR GCA 90 bp GCATATATCCAGTGGGTTGCTCAGTTTGTCTCGAGGAGCAGCTTCTTTAGGAGCTTACTTTCTGCCTCCTaGAGCAAGCTGATCACAGAT +
Preference number: 4 (lower is better)
Translates to: AYIQWVAQFVSRSSFFRSLLSAS*SKLITD
Trigger: ATCTGTGATCAGCTTGCTGCAGGAGGCAGAAAGTAA...GCTCCTAAAGAAGCTGCTCCTCGAGACAAACTGAGCAACCCACTGGATATATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR GCA 90 bp CCCTTGGAACAAGGAGATAGGGGCACCACACAGGCTCGGTTAACTCTTGTTCATTTCAGATTTACTTTCTaGCTCCTGCAGCAAGCTGAT +
Preference number: 4 (lower is better)
Translates to: PLEQGDRGTTQARLTLVHFRFTF*LLQQAD
Trigger: ATCAGCTTGCTGCAGGAGGCAGAAAGTAAATCTGAA...ATGAACAAGAGTTAACCGAGCCTGTGTGGTGCCCCTATCTCCTTGTTCCAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR GCA 90 bp CCCTTGGAACAAGGAGATAGGGGCACCACACAGGCTCGGTTAACTCTTGTTCATTTCCTCTGGATACTCTaGCTTTCAAGTCCCAGAAAT +
Preference number: 4 (lower is better)
Translates to: PLEQGDRGTTQARLTLVHFLWIL*LSSPRN
Trigger: ATTTCTGGGACTTGAAAGGCAGAGTATCCAGAGGAA...ATGAACAAGAGTTAACCGAGCCTGTGTGGTGCCCCTATCTCCTTGTTCCAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR GCA 90 bp TGGGCACACATAGTCTTAGAACAGTGGTCAAACAGCTCACAGGACCCTGTACTCCATTCAATAAGTCTTTaGCAGCTGCTCCGGCTTTTG +
Preference number: 4 (lower is better)
Translates to: WAHIVLEQWSNSSQDPVLHSISL*QLLRLL
Trigger: CAAAAGCCGGAGCAGCTGGCAAAGACTTATTGAATG...GAGTACAGGGTCCTGTGAGCTGTTTGACCACTGTTCTAAGACTATGTGTGCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR CCA 90 bp ACCTCACCTATCGGACTAAACATAAATCTTAAAACCTCCTATGGTCCTCTGAGCTGGCACCTGTGGCTGTaGCCAGCTTGTTATGAGCTG +
Preference number: 4 (lower is better)
Translates to: TSPIGLNINLKTSYGPLSWHLWL*PACYEL
Trigger: CAGCTCATAACAAGCTGGCCACAGCCACAGGTGCCA...GCTCAGAGGACCATAGGAGGTTTTAAGATTTATGTTTAGTCCGATAGGTGAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263461.11
ENST00000497136.6
CDS-3UTR CCA 90 bp CAGTGGTCAAACAGCTCACAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACTTTTGTGGTCAACGGTaGACACATACGAATAGCAAA +
Preference number: 4 (lower is better)
Translates to: QWSNSSQDPVLLFILDCDFCGQR*THTNSK
Trigger: TTTGCTATTCGTATGTGTCCACCGTTGACCACAAAA...GTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTGTGAGCTGTTTGACCACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR CCA 90 bp GCATATATCCAGTGGGTTGCTCAGTTTGTCTCGAGGAGCAGCTTCTTTAGGAGCACCAACAGCCAGCAGTaGCTGATACATCTTGATGTT +
Preference number: 4 (lower is better)
Translates to: AYIQWVAQFVSRSSFFRSTNSQQ*LIHLDV
Trigger: AACATCAAGATGTATCAGCCACTGCTGGCTGTTGGT...GCTCCTAAAGAAGCTGCTCCTCGAGACAAACTGAGCAACCCACTGGATATATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR CCA 90 bp CTACCCATACTTCCATCTGGTGGAATCCGAGCACTGTCTTTTACTGAGTTTCCTAGACCACTGGTGAGATaGTACACCAGGACAGAACCA +
Preference number: 4 (lower is better)
Translates to: LPILPSGGIRALSFTEFPRPLVR*YTRTEP
Trigger: TGGTTCTGTCCTGGTGTACCATCTCACCAGTGGTCT...AGGAAACTCAGTAAAAGACAGTGCTCGGATTCCACCAGATGGAAGTATGGGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR CCA 90 bp TGGGCACACATAGTCTTAGAACAGTGGTCAAACAGCTCACAGGACCCTGTACTCCCCAAGAGCAGTAGCTaGTCTGTACATTTCCTTGTA +
Preference number: 4 (lower is better)
Translates to: WAHIVLEQWSNSSQDPVLPKSSS*SVHFLV
Trigger: TACAAGGAAATGTACAGACCAGCTACTGCTCTTGGG...GAGTACAGGGTCCTGTGAGCTGTTTGACCACTGTTCTAAGACTATGTGTGCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR CCA 90 bp GTAGGCATTTTCACAGAGCACGTCATAGCATATATCCAGTGGGTTGCTCAGTTTTACTCCTCTTCATCCTaGACTGTGACGGTGGCCACA +
Preference number: 4 (lower is better)
Translates to: VGIFTEHVIAYIQWVAQFYSSSS*TVTVAT
Trigger: TGTGGCCACCGTCACAGTCCAGGATGAAGAGGAGTA...AAACTGAGCAACCCACTGGATATATGCTATGACGTGCTCTGTGAAAATGCCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR TCA 90 bp ACCTCACCTATCGGACTAAACATAAATCTTAAAACCTCCTATGGTCCTCTGAGCCGGCTGCATTCTCATTaGCAGGACAGCACACCATAC +
Preference number: 4 (lower is better)
Translates to: TSPIGLNINLKTSYGPLSRLHSH*QDSTPY
Trigger: GTATGGTGTGCTGTCCTGTCAATGAGAATGCAGCCG...GCTCAGAGGACCATAGGAGGTTTTAAGATTTATGTTTAGTCCGATAGGTGAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263461.11
ENST00000497136.6
CDS-3UTR TCA 90 bp TGGGCACACATAGTCTTAGAACAGTGGTCAAACAGCTCACAGGACCCTGTACTCCAAGCTGATCACAGATaGTTCAACAATACTCAGCTC +
Preference number: 4 (lower is better)
Translates to: WAHIVLEQWSNSSQDPVLQADHR*FNNTQL
Trigger: GAGCTGAGTATTGTTGAATCATCTGTGATCAGCTTG...GAGTACAGGGTCCTGTGAGCTGTTTGACCACTGTTCTAAGACTATGTGTGCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR TCA 90 bp AGTCTTAGAACAGTGGTCAAACAGCTCACAGGACCCTGTACTCCTCTTCATCCTCAAGATCACTTTATCTaGCGTACACCAGTCCACATC +
Preference number: 4 (lower is better)
Translates to: SLRTVVKQLTGPCTPLHPQDHFI*RTPVHI
Trigger: GATGTGGACTGGTGTACGTCAGATAAAGTGATCTTG...AGGATGAAGAGGAGTACAGGGTCCTGTGAGCTGTTTGACCACTGTTCTAAGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR TCA 90 bp TGCCTCTTTCACCACGAAAAGCAATGCTCCTACCTGTTGGAAGATCAACCAGTTGATGCACCCATCATCTaGGGCCAAGATCACTTTATC +
Preference number: 4 (lower is better)
Translates to: CLFHHEKQCSYLLEDQPVDAPII*GQDHFI
Trigger: GATAAAGTGATCTTGGCCTCAGATGATGGGTGCATC...AACTGGTTGATCTTCCAACAGGTAGGAGCATTGCTTTTCGTGGTGAAAGAGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR TCA 90 bp AGTCTTAGAACAGTGGTCAAACAGCTCACAGGACCCTGTACTCCTCTTCATCCTACCTCTGCAAGAGAGTaGATTCTGGATCAAGCAACA +
Preference number: 4 (lower is better)
Translates to: SLRTVVKQLTGPCTPLHPTSARE*ILDQAT
Trigger: TGTTGCTTGATCCAGAATTCACTCTCTTGCAGAGGT...AGGATGAAGAGGAGTACAGGGTCCTGTGAGCTGTTTGACCACTGTTCTAAGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR TCA 90 bp CTGCTTAAAACCGAGGTTCTTCAAACTCCGGGCATAATCTGCATATATAGCAGTATCAGGCAGAGCAACTaGACGCCCTCTGCCAATTTG +
Preference number: 4 (lower is better)
Translates to: LLKTEVLQTPGIICIYSSIRQSN*TPSANL
Trigger: CAAATTGGCAGAGGGCGTTCAGTTGCTCTGCCTGAT...ACTGCTATATATGCAGATTATGCCCGGAGTTTGAAGAACCTCGGTTTTAAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR TCA 90 bp AGTCTTAGAACAGTGGTCAAACAGCTCACAGGACCCTGTACTCCTCTTCATCCTTCTCTGTGTCCTCAGTaGCTTCAAATGCTCCATACT +
Preference number: 4 (lower is better)
Translates to: SLRTVVKQLTGPCTPLHPSLCPQ*LQMLHT
Trigger: AGTATGGAGCATTTGAAGTCACTGAGGACACAGAGA...AGGATGAAGAGGAGTACAGGGTCCTGTGAGCTGTTTGACCACTGTTCTAAGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR GCA 90 bp CTAAGTTCAGATTTACTTTCTGCCTCCTGCAGCAAGCTGATCACAGATGATTCAGCGACAGTCCAGAAGTaGAGCTCCGATTCATCACCA +
Preference number: 4 (lower is better)
Translates to: LSSDLLSASCSKLITDDSATVQK*SSDSSP
Trigger: TGGTGATGAATCGGAGCTGCACTTCTGGACTGTCGC...TGAATCATCTGTGATCAGCTTGCTGCAGGAGGCAGAAAGTAAATCTGAACTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR GCA 90 bp ATTAGTGATGGTTGTTCCTCTTCCAGATTTTCAGACGGGATGTCTCCACCTCACATTCAAACGGACTTTTaGCAGCCATGCAGCCCGATT +
Preference number: 4 (lower is better)
Translates to: ISDGCSSSRFSDGMSPPHIQTDF*QPCSPI
Trigger: AATCGGGCTGCATGGCTGGCAAAAGTCCGTTTGAAT...GTGAGGTGGAGACATCCCGTCTGAAAATCTGGAAGAGGAACAACCATCACTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497136.6
CDS-3UTR GCA 90 bp TCAACCCACCGCCTTAAAACATCGGCACACTCCTCAGGATTCAAACGGACTTTTAAGAGAACTGCTCCCTaGTTAAAACCGAGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: STHRLKTSAHSSGFKRTFKRTAP*LKPRFF
Trigger: GAAGAACCTCGGTTTTAAGCAGGGAGCAGTTCTCTT...AAAAGTCCGTTTGAATCCTGAGGAGTGTGCCGATGTTTTAAGGCGGTGGGTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR GCA 90 bp CATGGCCTCTCGAGTTGCAAGTTGCTTCTTTCTCAGGCTCTTCAAGTTGTGAGACATTCAATAAGTCTTTaGCAGCTGCTCCGGCTTTTG +
Preference number: 4 (lower is better)
Translates to: HGLSSCKLLLSQALQVVRHSISL*QLLRLL
Trigger: CAAAAGCCGGAGCAGCTGGCAAAGACTTATTGAATG...TCTCACAACTTGAAGAGCCTGAGAAAGAAGCAACTTGCAACTCGAGAGGCCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR CCA 90 bp TTACCAGGAGCAAAACGAATCTTCCTCACCCAACTTCGGTGTGTGGGTATTCCTCATACTTCCATCTGGTaGAATCCGAGCACTGTCTTT +
Preference number: 4 (lower is better)
Translates to: LPGAKRIFLTQLRCVGIPHTSIW*NPSTVF
Trigger: AAAGACAGTGCTCGGATTCCACCAGATGGAAGTATG...AGGAATACCCACACACCGAAGTTGGGTGAGGAAGATTCGTTTTGCTCCTGGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR CCA 90 bp TGGGCACACATAGTCTTAGAACAGTGGTCAAACAGCTCACAGGACCCTGTACTCATAGCATATATCCAGTaGGTTGCTCAGTTTGTCTCG +
Preference number: 4 (lower is better)
Translates to: WAHIVLEQWSNSSQDPVLIAYIQ*VAQFVS
Trigger: CGAGACAAACTGAGCAACCCACTGGATATATGCTAT...GAGTACAGGGTCCTGTGAGCTGTTTGACCACTGTTCTAAGACTATGTGTGCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR CCA 90 bp TGCCTCTTTCACCACGAAAAGCAATGCTCCTACCTGTTGGAAGATCAACCAGTTCAATGGGTTCTTCCTTaGGGGACTCAAGCTCATTCA +
Preference number: 4 (lower is better)
Translates to: CLFHHEKQCSYLLEDQPVQWVLP*GTQAHS
Trigger: TGAATGAGCTTGAGTCCCCCAAGGAAGAACCCATTG...AACTGGTTGATCTTCCAACAGGTAGGAGCATTGCTTTTCGTGGTGAAAGAGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR CAA 72 bp ATACCCTTGACTTCACATGAGTGGATGCTTAACTCTTaGTGTAGCAGACCACTGGTGAGATGGTACACCAGG +
Preference number: 4 (lower is better)
Translates to: IPLTSHEWMLNS*CSRPLVRWYTR
Trigger: CCTGGTGTACCATCTCACCAGTGGTCTGCTACACAAAGAGTTAAGCATCCACTCATGTGAAGTCAAGGGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR TCA 90 bp ACCTCACCTATCGGACTAAACATAAATCTTAAAACCTCCTATGGTCCTCTGAGCTCTTGGATCTCACACTaGGCTACTCCTGCTGCTACA +
Preference number: 4 (lower is better)
Translates to: TSPIGLNINLKTSYGPLSSWISH*ATPAAT
Trigger: TGTAGCAGCAGGAGTAGCTCAGTGTGAGATCCAAGA...GCTCAGAGGACCATAGGAGGTTTTAAGATTTATGTTTAGTCCGATAGGTGAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263461.11
ENST00000497136.6
CDS-3UTR TCA 90 bp CATGGCCTCTCGAGTTGCAAGTTGCTTCTTTCTCAGGCTCTTCAAGTTGTGAGACAAGCTGATCACAGATaGTTCAACAATACTCAGCTC +
Preference number: 4 (lower is better)
Translates to: HGLSSCKLLLSQALQVVRQADHR*FNNTQL
Trigger: GAGCTGAGTATTGTTGAATCATCTGTGATCAGCTTG...TCTCACAACTTGAAGAGCCTGAGAAAGAAGCAACTTGCAACTCGAGAGGCCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR TCA 90 bp TCAACCCACCGCCTTAAAACATCGGCACACTCCTCAGGATTCAAACGGACTTTTCGGGCAGAGATGTTCTaGCTAAGTTCAGATTTACTT +
Preference number: 4 (lower is better)
Translates to: STHRLKTSAHSSGFKRTFRAEMF*LSSDLL
Trigger: AAGTAAATCTGAACTTAGTCAGAACATCTCTGCCCG...AAAAGTCCGTTTGAATCCTGAGGAGTGTGCCGATGTTTTAAGGCGGTGGGTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR TCA 90 bp AGTCTTAGAACAGTGGTCAAACAGCTCACAGGACCCTGTACTCCTCTTCATCCTCCTTCAACAGTGAGATaGTACACTTGGCCATCAATA +
Preference number: 4 (lower is better)
Translates to: SLRTVVKQLTGPCTPLHPPSTVR*YTWPSI
Trigger: TATTGATGGCCAAGTGTATCATCTCACTGTTGAAGG...AGGATGAAGAGGAGTACAGGGTCCTGTGAGCTGTTTGACCACTGTTCTAAGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR TCA 90 bp CTTCAATGGGTTCTTCCTTGGGGGACTCAAGCTCATTCAATAAGTCTTTGCCAGACCTCTGCAAGAGAGTaGATTCTGGATCAAGCAACA +
Preference number: 4 (lower is better)
Translates to: LQWVLPWGTQAHSISLCQTSARE*ILDQAT
Trigger: TGTTGCTTGATCCAGAATTCACTCTCTTGCAGAGGT...CTGGCAAAGACTTATTGAATGAGCTTGAGTCCCCCAAGGAAGAACCCATTGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR TCA 90 bp TGGGCACACATAGTCTTAGAACAGTGGTCAAACAGCTCACAGGACCCTGTACTCCCTTTGATTTCTGATTaGCTTGTGGAGAACAAAGGT +
Preference number: 4 (lower is better)
Translates to: WAHIVLEQWSNSSQDPVLPLISD*LVENKG
Trigger: ACCTTTGTTCTCCACAAGTCAATCAGAAATCAAAGG...GAGTACAGGGTCCTGTGAGCTGTTTGACCACTGTTCTAAGACTATGTGTGCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR TCA 90 bp CTTCAATGGGTTCTTCCTTGGGGGACTCAAGCTCATTCAATAAGTCTTTGCCAGAACCAGGAGAGCCTTTaGTTTCTGATTGACTTGTGG +
Preference number: 4 (lower is better)
Translates to: LQWVLPWGTQAHSISLCQNQESL*FLIDLW
Trigger: CCACAAGTCAATCAGAAATCAAAGGCTCTCCTGGTT...CTGGCAAAGACTTATTGAATGAGCTTGAGTCCCCCAAGGAAGAACCCATTGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR TCA 90 bp AAACTTACTCTCAACATAGATGCTTATGTGCTTTTGGGCACACATAGTCTTAGACGAGAGAACATGAAGTaGCTGCTCACGGGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: KLTLNIDAYVLLGTHSLRRENMK*LLTGRP
Trigger: AGGCCTGCCCGTGAGCAGTCACTTCATGTTCTCTCG...TCTAAGACTATGTGTGCCCAAAAGCACATAAGCATCTATGTTGAGAGTAAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497136.6
CDS-3UTR GCA 90 bp ATGCTTATGTGCTTTTGGGCACACATAGTCTTAGAACAGTGGTCAAACAGCTCAACACTGAGCTACTCCTaGTGCTACATCCCAGACGAT +
Preference number: 4 (lower is better)
Translates to: MLMCFWAHIVLEQWSNSSTLSYS*CYIPDD
Trigger: ATCGTCTGGGATGTAGCAGCAGGAGTAGCTCAGTGT...TGAGCTGTTTGACCACTGTTCTAAGACTATGTGTGCCCAAAAGCACATAAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263461.11
ENST00000497136.6
CDS-3UTR GCA 90 bp ACCTCACCTATCGGACTAAACATAAATCTTAAAACCTCCTATGGTCCTCTGAGCTCCTGTGCGTTCTATTaGAATCACACCCACCGTCTG +
Preference number: 4 (lower is better)
Translates to: TSPIGLNINLKTSYGPLSSCAFY*NHTHRL
Trigger: CAGACGGTGGGTGTGATTGCAATAGAACGCACAGGA...GCTCAGAGGACCATAGGAGGTTTTAAGATTTATGTTTAGTCCGATAGGTGAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263461.11
ENST00000497136.6
CDS-3UTR GCA 90 bp GCCTTAAAACATCGGCACACTCCTCAGGATTCAAACGGACTTTTGCCAGCCATGAAAATGGAACTCCTGTaGGTTCTATTGCAATCACAC +
Preference number: 4 (lower is better)
Translates to: ALKHRHTPQDSNGLLPAMKMELL*VLLQSH
Trigger: GTGTGATTGCAATAGAACGCACAGGAGTTCCATTTT...CATGGCTGGCAAAAGTCCGTTTGAATCCTGAGGAGTGTGCCGATGTTTTAAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000497136.6
CDS-3UTR GCA 90 bp CAGTGGTCAAACAGCTCACAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACATTTCGATTACAAACTaGAGACTTGAGTTCCCATAT +
Preference number: 4 (lower is better)
Translates to: QWSNSSQDPVLLFILDCDISITN*RLEFPY
Trigger: ATATGGGAACTCAAGTCTGCAGTTTGTAATCGAAAT...GTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTGTGAGCTGTTTGACCACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263461.11
ENST00000497136.6
CDS-3UTR GCA 90 bp CACTGGTGGGCAGCAGCATCGAAGGGTATAAAGACATTTACACATTTTCCCTGGTGGCAGATTCATCATTaGCTCTTTCACCACGAAAAG +
Preference number: 4 (lower is better)
Translates to: HWWAAASKGIKTFTHFPWWQIHH*LFHHEK
Trigger: CTTTTCGTGGTGAAAGAGGCAATGATGAATCTGCCA...CCAGGGAAAATGTGTAAATGTCTTTATACCCTTCGATGCTGCTGCCCACCAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497136.6
CDS-3UTR GCA 90 bp TGGGCACACATAGTCTTAGAACAGTGGTCAAACAGCTCACAGGACCCTGTACTCGAAAGGTCACATTTCTaGCACTTCTTAAACTGCTCA +
Preference number: 4 (lower is better)
Translates to: WAHIVLEQWSNSSQDPVLERSHF*HFLNCS
Trigger: TGAGCAGTTTAAGAAGTGGCAGAAATGTGACCTTTC...GAGTACAGGGTCCTGTGAGCTGTTTGACCACTGTTCTAAGACTATGTGTGCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR GCA 90 bp TGCCTCTTTCACCACGAAAAGCAATGCTCCTACCTGTTGGAAGATCAACCAGTTATATATCCAGTGGGTTaGTCAGTTTGTCTCGAGGAG +
Preference number: 4 (lower is better)
Translates to: CLFHHEKQCSYLLEDQPVIYPVG*SVCLEE
Trigger: CTCCTCGAGACAAACTGAGCAACCCACTGGATATAT...AACTGGTTGATCTTCCAACAGGTAGGAGCATTGCTTTTCGTGGTGAAAGAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR GCA 90 bp CTACCCATACTTCCATCTGGTGGAATCCGAGCACTGTCTTTTACTGAGTTTCCTGACCGTTTCACTTCCTaGAGATTAACCCTTTCTAGC +
Preference number: 4 (lower is better)
Translates to: LPILPSGGIRALSFTEFPDRFTS*RLTLSS
Trigger: GCTAGAAAGGGTTAATCTGCAGGAAGTGAAACGGTC...AGGAAACTCAGTAAAAGACAGTGCTCGGATTCCACCAGATGGAAGTATGGGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR GCA 90 bp AGTCTTAGAACAGTGGTCAAACAGCTCACAGGACCCTGTACTCCTCTTCATCCTGGCAATCATATTCGTTaGCACCAACTTAATGGTGCT +
Preference number: 4 (lower is better)
Translates to: SLRTVVKQLTGPCTPLHPGNHIR*HQLNGA
Trigger: AGCACCATTAAGTTGGTGGCAACGAATATGATTGCC...AGGATGAAGAGGAGTACAGGGTCCTGTGAGCTGTTTGACCACTGTTCTAAGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR GCA 90 bp CATGGCCTCTCGAGTTGCAAGTTGCTTCTTTCTCAGGCTCTTCAAGTTGTGAGAGGCAATCATATTCGTTaGCACCAACTTAATGGTGCT +
Preference number: 4 (lower is better)
Translates to: HGLSSCKLLLSQALQVVRGNHIR*HQLNGA
Trigger: AGCACCATTAAGTTGGTGGCAACGAATATGATTGCC...TCTCACAACTTGAAGAGCCTGAGAAAGAAGCAACTTGCAACTCGAGAGGCCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR GCA 90 bp CTAAGTTCAGATTTACTTTCTGCCTCCTGCAGCAAGCTGATCACAGATGATTCATTCTTCCCCAGCAATTaGACTTTGCCCTGTTCCGTG +
Preference number: 4 (lower is better)
Translates to: LSSDLLSASCSKLITDDSFFPSN*TLPCSV
Trigger: CACGGAACAGGGCAAAGTGCAATTGCTGGGGAAGAA...TGAATCATCTGTGATCAGCTTGCTGCAGGAGGCAGAAAGTAAATCTGAACTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497136.6
CDS-3UTR CCA 90 bp GTAGGCATTTTCACAGAGCACGTCATAGCATATATCCAGTGGGTTGCTCAGTTTTCTTCTTCCATAGTTTaGTGCCAGTGTCGGCATTCC +
Preference number: 4 (lower is better)
Translates to: VGIFTEHVIAYIQWVAQFSSSIV*CQCRHS
Trigger: GGAATGCCGACACTGGCACCAAACTATGGAAGAAGA...AAACTGAGCAACCCACTGGATATATGCTATGACGTGCTCTGTGAAAATGCCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497136.6
CDS-3UTR CCA 90 bp AACTCTTGTTCATCCATTCTAAAGCACGCAGACTTCATAGACATCTCTAGGACTCAGCTTGTTATGAGCTaGGCTAGAGTGTGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: NSCSSILKHADFIDISRTQLVMS*ARVWAG
Trigger: TCCAGCCCACACTCTAGCCCAGCTCATAACAAGCTG...AGTCCTAGAGATGTCTATGAAGTCTGCGTGCTTTAGAATGGATGAACAAGAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497136.6
CDS-3UTR CCA 90 bp CCTATCGGACTAAACATAAATCTTAAAACCTCCTATGGTCCTCTGAGCCTAAAATGGCACCTGTGGCTGTaGCCAGCTTGTTATGAGCTG +
Preference number: 4 (lower is better)
Translates to: PIGLNINLKTSYGPLSLKWHLWL*PACYEL
Trigger: CAGCTCATAACAAGCTGGCCACAGCCACAGGTGCCA...TTTTAGGCTCAGAGGACCATAGGAGGTTTTAAGATTTATGTTTAGTCCGATAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263461.11
ENST00000497136.6
CDS-3UTR CCA 90 bp ACCTCACCTATCGGACTAAACATAAATCTTAAAACCTCCTATGGTCCTCTGAGCGGTAAGCTCCTGAACTaGATCTGGATCTGGTTCCTC +
Preference number: 4 (lower is better)
Translates to: TSPIGLNINLKTSYGPLSGKLLN*IWIWFL
Trigger: GAGGAACCAGATCCAGATCCAGTTCAGGAGCTTACC...GCTCAGAGGACCATAGGAGGTTTTAAGATTTATGTTTAGTCCGATAGGTGAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263461.11
ENST00000497136.6
CDS-3UTR CCA 90 bp CTAAGTTCAGATTTACTTTCTGCCTCCTGCAGCAAGCTGATCACAGATGATTCAACCCATACTTCCATCTaGTGGAATCCGAGCACTGTC +
Preference number: 4 (lower is better)
Translates to: LSSDLLSASCSKLITDDSTHTSI*WNPSTV
Trigger: GACAGTGCTCGGATTCCACCAGATGGAAGTATGGGT...TGAATCATCTGTGATCAGCTTGCTGCAGGAGGCAGAAAGTAAATCTGAACTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR CCA 90 bp CTTCAATGGGTTCTTCCTTGGGGGACTCAAGCTCATTCAATAAGTCTTTGCCAGGTGTGGGTATTCCTCTaGATACTCTGCCTTTCAAGT +
Preference number: 4 (lower is better)
Translates to: LQWVLPWGTQAHSISLCQVWVFL*ILCLSS
Trigger: ACTTGAAAGGCAGAGTATCCAGAGGAATACCCACAC...CTGGCAAAGACTTATTGAATGAGCTTGAGTCCCCCAAGGAAGAACCCATTGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR CCA 90 bp CCCTTGGAACAAGGAGATAGGGGCACCACACAGGCTCGGTTAACTCTTGTTCATCAAGAGAGTGAATTCTaGATCAAGCAACAGTTTCTT +
Preference number: 4 (lower is better)
Translates to: PLEQGDRGTTQARLTLVHQESEF*IKQQFL
Trigger: AAGAAACTGTTGCTTGATCCAGAATTCACTCTCTTG...ATGAACAAGAGTTAACCGAGCCTGTGTGGTGCCCCTATCTCCTTGTTCCAAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR CCA 90 bp TTGACTTCACATGAGTGGATGCTTAACTCTTTGTGTAGCAGACCACTGGTGAGATGTGGAGAACAAAGGTaGTCAACCCACCGCCTTAAA +
Preference number: 4 (lower is better)
Translates to: LTSHEWMLNSLCSRPLVRCGEQR*STHRLK
Trigger: TTTAAGGCGGTGGGTTGACCACCTTTGTTCTCCACA...TCTCACCAGTGGTCTGCTACACAAAGAGTTAAGCATCCACTCATGTGAAGTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR CCA 90 bp CACTCTTCAATGGGTTCTTCCTTGGGGGACTCAAGCTCATTCAATAAGTCTTTGTGTGGAGAACAAAGGTaGTCAACCCACCGCCTTAAA +
Preference number: 4 (lower is better)
Translates to: HSSMGSSLGDSSSFNKSLCGEQR*STHRLK
Trigger: TTTAAGGCGGTGGGTTGACCACCTTTGTTCTCCACA...CAAAGACTTATTGAATGAGCTTGAGTCCCCCAAGGAAGAACCCATTGAAGAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR CCA 90 bp ATGCTTATGTGCTTTTGGGCACACATAGTCTTAGAACAGTGGTCAAACAGCTCAGCTGTCACTCTTCAATaGGTTCTTCCTTGGGGGACT +
Preference number: 4 (lower is better)
Translates to: MLMCFWAHIVLEQWSNSSAVTLQ*VLPWGT
Trigger: AGTCCCCCAAGGAAGAACCCATTGAAGAGTGACAGC...TGAGCTGTTTGACCACTGTTCTAAGACTATGTGTGCCCAAAAGCACATAAGCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR CCA 90 bp CCCTTGGAACAAGGAGATAGGGGCACCACACAGGCTCGGTTAACTCTTGTTCATTTTACACATTTTCCCTaGAAACCTGCATACTGCATT +
Preference number: 4 (lower is better)
Translates to: PLEQGDRGTTQARLTLVHFTHFP*KPAYCI
Trigger: AATGCAGTATGCAGGTTTCCAGGGAAAATGTGTAAA...ATGAACAAGAGTTAACCGAGCCTGTGTGGTGCCCCTATCTCCTTGTTCCAAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000497136.6
CDS-3UTR CCA 90 bp ATGCTTATGTGCTTTTGGGCACACATAGTCTTAGAACAGTGGTCAAACAGCTCAGATTTACATCACTGGTaGGCAGCAGCATCGAAGGGT +
Preference number: 4 (lower is better)
Translates to: MLMCFWAHIVLEQWSNSSDLHHW*AAASKG
Trigger: ACCCTTCGATGCTGCTGCCCACCAGTGATGTAAATC...TGAGCTGTTTGACCACTGTTCTAAGACTATGTGTGCCCAAAAGCACATAAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497136.6
CDS-3UTR TCA 90 bp ACCTCACCTATCGGACTAAACATAAATCTTAAAACCTCCTATGGTCCTCTGAGCGGCAGGTATGCCAACTaGAGGCAATCATTGAGAGTT +
Preference number: 4 (lower is better)
Translates to: TSPIGLNINLKTSYGPLSGRYAN*RQSLRV
Trigger: AACTCTCAATGATTGCCTTCAGTTGGCATACCTGCC...GCTCAGAGGACCATAGGAGGTTTTAAGATTTATGTTTAGTCCGATAGGTGAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263461.11
ENST00000497136.6
CDS-3UTR TCA 90 bp CTGCTTAAAACCGAGGTTCTTCAAACTCCGGGCATAATCTGCATATATAGCAGTGGCAGGTATGCCAACTaGAGGCAATCATTGAGAGTT +
Preference number: 4 (lower is better)
Translates to: LLKTEVLQTPGIICIYSSGRYAN*RQSLRV
Trigger: AACTCTCAATGATTGCCTTCAGTTGGCATACCTGCC...ACTGCTATATATGCAGATTATGCCCGGAGTTTGAAGAACCTCGGTTTTAAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497136.6
CDS-3UTR TCA 90 bp CCTATCGGACTAAACATAAATCTTAAAACCTCCTATGGTCCTCTGAGCCTAAAAATCACACCCACCGTCTaGTTCACCTCAAGGTCAAGG +
Preference number: 4 (lower is better)
Translates to: PIGLNINLKTSYGPLSLKITPTV*FTSRSR
Trigger: CCTTGACCTTGAGGTGAATCAGACGGTGGGTGTGAT...TTTTAGGCTCAGAGGACCATAGGAGGTTTTAAGATTTATGTTTAGTCCGATAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263461.11
ENST00000497136.6
CDS-3UTR TCA 90 bp ATTAGTGATGGTTGTTCCTCTTCCAGATTTTCAGACGGGATGTCTCCACCTCACAATAAACCATCACGCTaGAAGCAGGGTATTACCTGT +
Preference number: 4 (lower is better)
Translates to: ISDGCSSSRFSDGMSPPHNKPSR*KQGITC
Trigger: ACAGGTAATACCCTGCTTTCAGCGTGATGGTTTATT...GTGAGGTGGAGACATCCCGTCTGAAAATCTGGAAGAGGAACAACCATCACTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497136.6
CDS-3UTR TCA 90 bp TTAATCATTTCGATGGCAGATTCATCATTGCCTCTTTCACCACGAAAAGCAATGGACAGCACACCATACTaGAGGGACGGACGGTTTTTG +
Preference number: 4 (lower is better)
Translates to: LIISMADSSLPLSPRKAMDSTPY*RDGRFL
Trigger: CAAAAACCGTCCGTCCCTTCAGTATGGTGTGCTGTC...CATTGCTTTTCGTGGTGAAAGAGGCAATGATGAATCTGCCATCGAAATGATTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497136.6
CDS-3UTR TCA 90 bp AAACTTACTCTCAACATAGATGCTTATGTGCTTTTGGGCACACATAGTCTTAGAGTAGCAGACCACTGGTaGGATGGTACACCAGGACAG +
Preference number: 4 (lower is better)
Translates to: KLTLNIDAYVLLGTHSLRVADHW*DGTPGQ
Trigger: CTGTCCTGGTGTACCATCTCACCAGTGGTCTGCTAC...TCTAAGACTATGTGTGCCCAAAAGCACATAAGCATCTATGTTGAGAGTAAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR TCA 90 bp CACTCTTCAATGGGTTCTTCCTTGGGGGACTCAAGCTCATTCAATAAGTCTTTGCAAGATCACTTTATCTaGCGTACACCAGTCCACATC +
Preference number: 4 (lower is better)
Translates to: HSSMGSSLGDSSSFNKSLQDHFI*RTPVHI
Trigger: GATGTGGACTGGTGTACGTCAGATAAAGTGATCTTG...CAAAGACTTATTGAATGAGCTTGAGTCCCCCAAGGAAGAACCCATTGAAGAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR TCA 90 bp GTAGGCATTTTCACAGAGCACGTCATAGCATATATCCAGTGGGTTGCTCAGTTTCATTCACGTTCTTTCTaGGACCAACGCAGGATACAA +
Preference number: 4 (lower is better)
Translates to: VGIFTEHVIAYIQWVAQFHSRSF*DQRRIQ
Trigger: TTGTATCCTGCGTTGGTCTCAGAAAGAACGTGAATG...AAACTGAGCAACCCACTGGATATATGCTATGACGTGCTCTGTGAAAATGCCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR GCA 90 bp AACTCTTGTTCATCCATTCTAAAGCACGCAGACTTCATAGACATCTCTAGGACTACACTGAGCTACTCCTaGTGCTACATCCCAGACGAT +
Preference number: 4 (lower is better)
Translates to: NSCSSILKHADFIDISRTTLSYS*CYIPDD
Trigger: ATCGTCTGGGATGTAGCAGCAGGAGTAGCTCAGTGT...AGTCCTAGAGATGTCTATGAAGTCTGCGTGCTTTAGAATGGATGAACAAGAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497136.6
CDS-3UTR GCA 90 bp AGTCTTAGAACAGTGGTCAAACAGCTCACAGGACCCTGTACTCCTCTTCATCCTCTTCACATGAGTGGATaGTTAACTCTTTGTGTAGCA +
Preference number: 4 (lower is better)
Translates to: SLRTVVKQLTGPCTPLHPLHMSG*LTLCVA
Trigger: TGCTACACAAAGAGTTAAGCATCCACTCATGTGAAG...AGGATGAAGAGGAGTACAGGGTCCTGTGAGCTGTTTGACCACTGTTCTAAGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR GCA 90 bp CACTCTTCAATGGGTTCTTCCTTGGGGGACTCAAGCTCATTCAATAAGTCTTTGCACCACGAAAAGCAATaGTCCTACCTGTTGGAAGAT +
Preference number: 4 (lower is better)
Translates to: HSSMGSSLGDSSSFNKSLHHEKQ*SYLLED
Trigger: ATCTTCCAACAGGTAGGAGCATTGCTTTTCGTGGTG...CAAAGACTTATTGAATGAGCTTGAGTCCCCCAAGGAAGAACCCATTGAAGAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR GCA 90 bp ATGCTTATGTGCTTTTGGGCACACATAGTCTTAGAACAGTGGTCAAACAGCTCAACAAGCAGGCACCTCTaGAAGAGAGTGAATTCTGGA +
Preference number: 4 (lower is better)
Translates to: MLMCFWAHIVLEQWSNSSTSRHL*KRVNSG
Trigger: TCCAGAATTCACTCTCTTGCAGAGGTGCCTGCTTGT...TGAGCTGTTTGACCACTGTTCTAAGACTATGTGTGCCCAAAAGCACATAAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR GCA 90 bp ACCTCACCTATCGGACTAAACATAAATCTTAAAACCTCCTATGGTCCTCTGAGCACAAGCAGGCACCTCTaGAAGAGAGTGAATTCTGGA +
Preference number: 4 (lower is better)
Translates to: TSPIGLNINLKTSYGPLSTSRHL*KRVNSG
Trigger: TCCAGAATTCACTCTCTTGCAGAGGTGCCTGCTTGT...GCTCAGAGGACCATAGGAGGTTTTAAGATTTATGTTTAGTCCGATAGGTGAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263461.11
ENST00000497136.6
CDS-3UTR GCA 90 bp ACAAAACTTAGCAACTGCTTAAACCAAGGAATTAACGGTTCTGTGTTTTCAAGGGTAGCGGCAGGCGTCTaGAGCCTTATCTATCAGGCA +
Preference number: 4 (lower is better)
Translates to: TKLSNCLNQGINGSVFSRVAAGV*SLIYQA
Trigger: TGCCTGATAGATAAGGCTGCAGACGCCTGCCGCTAC...CCTTGAAAACACAGAACCGTTAATTCCTTGGTTTAAGCAGTTGCTAAGTTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263461.11
ENST00000497136.6
CDS-3UTR GCA 90 bp TCACTGGTGGGCAGCAGCATCGAAGGGTATAAAGACATTTACACATTTTCCCTGACTCCGGGCATAATCTaGATATATAGCAGTGATGAG +
Preference number: 4 (lower is better)
Translates to: SLVGSSIEGYKDIYTFSLTPGII*IYSSDE
Trigger: CTCATCACTGCTATATATGCAGATTATGCCCGGAGT...CAGGGAAAATGTGTAAATGTCTTTATACCCTTCGATGCTGCTGCCCACCAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497136.6
CDS-3UTR GCA 90 bp TGCCTCTTTCACCACGAAAAGCAATGCTCCTACCTGTTGGAAGATCAACCAGTTACTCCGGGCATAATCTaGATATATAGCAGTGATGAG +
Preference number: 4 (lower is better)
Translates to: CLFHHEKQCSYLLEDQPVTPGII*IYSSDE
Trigger: CTCATCACTGCTATATATGCAGATTATGCCCGGAGT...AACTGGTTGATCTTCCAACAGGTAGGAGCATTGCTTTTCGTGGTGAAAGAGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR CCA 90 bp ATGCTTATGTGCTTTTGGGCACACATAGTCTTAGAACAGTGGTCAAACAGCTCAGAGCACAATGTAATTTaGCGGGTGGATAGCAAGCAG +
Preference number: 4 (lower is better)
Translates to: MLMCFWAHIVLEQWSNSSEHNVI*RVDSKQ
Trigger: CTGCTTGCTATCCACCCGCCAAATTACATTGTGCTC...TGAGCTGTTTGACCACTGTTCTAAGACTATGTGTGCCCAAAAGCACATAAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263461.11
ENST00000497136.6
CDS-3UTR CCA 90 bp ACCTCACCTATCGGACTAAACATAAATCTTAAAACCTCCTATGGTCCTCTGAGCGAGCACAATGTAATTTaGCGGGTGGATAGCAAGCAG +
Preference number: 4 (lower is better)
Translates to: TSPIGLNINLKTSYGPLSEHNVI*RVDSKQ
Trigger: CTGCTTGCTATCCACCCGCCAAATTACATTGTGCTC...GCTCAGAGGACCATAGGAGGTTTTAAGATTTATGTTTAGTCCGATAGGTGAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263461.11
ENST00000497136.6
CDS-3UTR CCA 90 bp CACTCTTCAATGGGTTCTTCCTTGGGGGACTCAAGCTCATTCAATAAGTCTTTGAGCTGGGCTAGAGTGTaGGCTGGATATGTAAACTTT +
Preference number: 4 (lower is better)
Translates to: HSSMGSSLGDSSSFNKSLSWARV*AGYVNF
Trigger: AAAGTTTACATATCCAGCCCACACTCTAGCCCAGCT...CAAAGACTTATTGAATGAGCTTGAGTCCCCCAAGGAAGAACCCATTGAAGAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497136.6
CDS-3UTR CCA 90 bp GCATATATCCAGTGGGTTGCTCAGTTTGTCTCGAGGAGCAGCTTCTTTAGGAGCTTGACTTCACATGAGTaGATGCTTAACTCTTTGTGT +
Preference number: 4 (lower is better)
Translates to: AYIQWVAQFVSRSSFFRSLTSHE*MLNSLC
Trigger: ACACAAAGAGTTAAGCATCCACTCATGTGAAGTCAA...GCTCCTAAAGAAGCTGCTCCTCGAGACAAACTGAGCAACCCACTGGATATATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR CCA 90 bp CTTTCTGCCTCCTGCAGCAAGCTGATCACAGATGATTCAACAATACTCAGCTCTAATGCTCCTACCTGTTaGAAGATCAACCAGTTGAAG +
Preference number: 4 (lower is better)
Translates to: LSASCSKLITDDSTILSSNAPTC*KINQLK
Trigger: CTTCAACTGGTTGATCTTCCAACAGGTAGGAGCATT...AGAGCTGAGTATTGTTGAATCATCTGTGATCAGCTTGCTGCAGGAGGCAGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR CCA 90 bp ATGCTTATGTGCTTTTGGGCACACATAGTCTTAGAACAGTGGTCAAACAGCTCATGTGGAGAACAAAGGTaGTCAACCCACCGCCTTAAA +
Preference number: 4 (lower is better)
Translates to: MLMCFWAHIVLEQWSNSSCGEQR*STHRLK
Trigger: TTTAAGGCGGTGGGTTGACCACCTTTGTTCTCCACA...TGAGCTGTTTGACCACTGTTCTAAGACTATGTGTGCCCAAAAGCACATAAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR CCA 90 bp TGGGCACACATAGTCTTAGAACAGTGGTCAAACAGCTCACAGGACCCTGTACTCATGCTTATGTGCTTTTaGGCACACATAGTCTTAGAA +
Preference number: 4 (lower is better)
Translates to: WAHIVLEQWSNSSQDPVLMLMCF*AHIVLE
Trigger: TTCTAAGACTATGTGTGCCCAAAAGCACATAAGCAT...GAGTACAGGGTCCTGTGAGCTGTTTGACCACTGTTCTAAGACTATGTGTGCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR TCA 90 bp AAACTTACTCTCAACATAGATGCTTATGTGCTTTTGGGCACACATAGTCTTAGAGACAGCACACCATACTaGAGGGACGGACGGTTTTTG +
Preference number: 4 (lower is better)
Translates to: KLTLNIDAYVLLGTHSLRDSTPY*RDGRFL
Trigger: CAAAAACCGTCCGTCCCTTCAGTATGGTGTGCTGTC...TCTAAGACTATGTGTGCCCAAAAGCACATAAGCATCTATGTTGAGAGTAAGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263461.11
ENST00000497136.6
CDS-3UTR TCA 90 bp CTGCTTAAAACCGAGGTTCTTCAAACTCCGGGCATAATCTGCATATATAGCAGTTCCATTCAATACCCTTaGCTTCACATGAGTGGATGC +
Preference number: 4 (lower is better)
Translates to: LLKTEVLQTPGIICIYSSSIQYP*LHMSGC
Trigger: GCATCCACTCATGTGAAGTCAAGGGTATTGAATGGA...ACTGCTATATATGCAGATTATGCCCGGAGTTTGAAGAACCTCGGTTTTAAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR TCA 90 bp AGTCTTAGAACAGTGGTCAAACAGCTCACAGGACCCTGTACTCCTCTTCATCCTGGAAGATCAACCAGTTaGAGTTCATTTCTCACTAAT +
Preference number: 4 (lower is better)
Translates to: SLRTVVKQLTGPCTPLHPGRSTS*SSFLTN
Trigger: ATTAGTGAGAAATGAACTTCAACTGGTTGATCTTCC...AGGATGAAGAGGAGTACAGGGTCCTGTGAGCTGTTTGACCACTGTTCTAAGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR TCA 90 bp CTGCTTAAAACCGAGGTTCTTCAAACTCCGGGCATAATCTGCATATATAGCAGTCCAGGGGTTTATCTCTaGATACGACTGCCAAATACT +
Preference number: 4 (lower is better)
Translates to: LLKTEVLQTPGIICIYSSPGVYL*IRLPNT
Trigger: AGTATTTGGCAGTCGTATTCAGAGATAAACCCCTGG...ACTGCTATATATGCAGATTATGCCCGGAGTTTGAAGAACCTCGGTTTTAAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR TCA 90 bp AACTCTTGTTCATCCATTCTAAAGCACGCAGACTTCATAGACATCTCTAGGACTAGGCTCTTCAAGTTGTaGGATGGTGACCACTCCAAA +
Preference number: 4 (lower is better)
Translates to: NSCSSILKHADFIDISRTRLFKL*DGDHSK
Trigger: TTTGGAGTGGTCACCATCTCACAACTTGAAGAGCCT...AGTCCTAGAGATGTCTATGAAGTCTGCGTGCTTTAGAATGGATGAACAAGAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR TCA 90 bp AAAACCGAGGTTCTTCAAACTCCGGGCATAATCTGCATATATAGCAGTGATGAGTCTCTGTGTCCTCAGTaGCTTCAAATGCTCCATACT +
Preference number: 4 (lower is better)
Translates to: KTEVLQTPGIICIYSSDESLCPQ*LQMLHT
Trigger: AGTATGGAGCATTTGAAGTCACTGAGGACACAGAGA...CTCATCACTGCTATATATGCAGATTATGCCCGGAGTTTGAAGAACCTCGGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR TCA 90 bp CAGGGGTTTATCTCTGAATACGACTGCCAAATACTGCTTCAAATGAGATACTTTCCGTCAGCAGGAACTTaGAGAGTTTGGGCAGTAATG +
Preference number: 4 (lower is better)
Translates to: QGFISEYDCQILLQMRYFPSAGT*RVWAVM
Trigger: CATTACTGCCCAAACTCTTCAAGTTCCTGCTGACGG...AAAGTATCTCATTTGAAGCAGTATTTGGCAGTCGTATTCAGAGATAAACCCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605543.5
CDS-3UTR GCA 90 bp TCACTGGTGGGCAGCAGCATCGAAGGGTATAAAGACATTTACACATTTTCCCTGCTTCACATGAGTGGATaGTTAACTCTTTGTGTAGCA +
Preference number: 4 (lower is better)
Translates to: SLVGSSIEGYKDIYTFSLLHMSG*LTLCVA
Trigger: TGCTACACAAAGAGTTAAGCATCCACTCATGTGAAG...CAGGGAAAATGTGTAAATGTCTTTATACCCTTCGATGCTGCTGCCCACCAGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497136.6
CDS-3UTR GCA 90 bp ACCTCACCTATCGGACTAAACATAAATCTTAAAACCTCCTATGGTCCTCTGAGCTTACTTTCTGCCTCCTaGAGCAAGCTGATCACAGAT +
Preference number: 4 (lower is better)
Translates to: TSPIGLNINLKTSYGPLSLLSAS*SKLITD
Trigger: ATCTGTGATCAGCTTGCTGCAGGAGGCAGAAAGTAA...GCTCAGAGGACCATAGGAGGTTTTAAGATTTATGTTTAGTCCGATAGGTGAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263461.11
ENST00000497136.6
CDS-3UTR GCA 90 bp AAACTTACTCTCAACATAGATGCTTATGTGCTTTTGGGCACACATAGTCTTAGAGCGACAGTCCAGAAGTaGAGCTCCGATTCATCACCA +
Preference number: 4 (lower is better)
Translates to: KLTLNIDAYVLLGTHSLRATVQK*SSDSSP
Trigger: TGGTGATGAATCGGAGCTGCACTTCTGGACTGTCGC...TCTAAGACTATGTGTGCCCAAAAGCACATAAGCATCTATGTTGAGAGTAAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR GCA 90 bp ATGCTTATGTGCTTTTGGGCACACATAGTCTTAGAACAGTGGTCAAACAGCTCAATATATCCAGTGGGTTaGTCAGTTTGTCTCGAGGAG +
Preference number: 4 (lower is better)
Translates to: MLMCFWAHIVLEQWSNSSIYPVG*SVCLEE
Trigger: CTCCTCGAGACAAACTGAGCAACCCACTGGATATAT...TGAGCTGTTTGACCACTGTTCTAAGACTATGTGTGCCCAAAAGCACATAAGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR GCA 90 bp TTGACTTCACATGAGTGGATGCTTAACTCTTTGTGTAGCAGACCACTGGTGAGATTCCCTTTTACTAGGTaGCTGTTAAGTCTGATCAGC +
Preference number: 4 (lower is better)
Translates to: LTSHEWMLNSLCSRPLVRFPFTR*LLSLIS
Trigger: GCTGATCAGACTTAACAGGCACCTAGTAAAAGGGAA...TCTCACCAGTGGTCTGCTACACAAAGAGTTAAGCATCCACTCATGTGAAGTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497136.6
CDS-3UTR GCA 90 bp CATGGCCTCTCGAGTTGCAAGTTGCTTCTTTCTCAGGCTCTTCAAGTTGTGAGATGGAAACCTGCATACTaGATTAAGATACAAGCACTT +
Preference number: 4 (lower is better)
Translates to: HGLSSCKLLLSQALQVVRWKPAY*IKIQAL
Trigger: AAGTGCTTGTATCTTAATGCAGTATGCAGGTTTCCA...TCTCACAACTTGAAGAGCCTGAGAAAGAAGCAACTTGCAACTCGAGAGGCCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497136.6
CDS-3UTR CCA 90 bp CTGCTTAAAACCGAGGTTCTTCAAACTCCGGGCATAATCTGCATATATAGCAGTACCAACAGCCAGCAGTaGCTGATACATCTTGATGTT +
Preference number: 4 (lower is better)
Translates to: LLKTEVLQTPGIICIYSSTNSQQ*LIHLDV
Trigger: AACATCAAGATGTATCAGCCACTGCTGGCTGTTGGT...ACTGCTATATATGCAGATTATGCCCGGAGTTTGAAGAACCTCGGTTTTAAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR CCA 90 bp CACTCTTCAATGGGTTCTTCCTTGGGGGACTCAAGCTCATTCAATAAGTCTTTGATAGCATATATCCAGTaGGTTGCTCAGTTTGTCTCG +
Preference number: 4 (lower is better)
Translates to: HSSMGSSLGDSSSFNKSLIAYIQ*VAQFVS
Trigger: CGAGACAAACTGAGCAACCCACTGGATATATGCTAT...CAAAGACTTATTGAATGAGCTTGAGTCCCCCAAGGAAGAACCCATTGAAGAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR CCA 90 bp ATGCTTATGTGCTTTTGGGCACACATAGTCTTAGAACAGTGGTCAAACAGCTCACCCAAGAGCAGTAGCTaGTCTGTACATTTCCTTGTA +
Preference number: 4 (lower is better)
Translates to: MLMCFWAHIVLEQWSNSSPKSSS*SVHFLV
Trigger: TACAAGGAAATGTACAGACCAGCTACTGCTCTTGGG...TGAGCTGTTTGACCACTGTTCTAAGACTATGTGTGCCCAAAAGCACATAAGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR CCA 90 bp TTGACTTCACATGAGTGGATGCTTAACTCTTTGTGTAGCAGACCACTGGTGAGAATAGTCTTAGAACAGTaGTCAAACAGCTCACAGGAC +
Preference number: 4 (lower is better)
Translates to: LTSHEWMLNSLCSRPLVRIVLEQ*SNSSQD
Trigger: GTCCTGTGAGCTGTTTGACCACTGTTCTAAGACTAT...TCTCACCAGTGGTCTGCTACACAAAGAGTTAAGCATCCACTCATGTGAAGTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR CAA 72 bp GGTGACCACTCCAAAGCAGTTATTGTAGGGAAGTTTTaGGACATCTCTCTAAGAAGGGTACAAGTCCTAACA +
Preference number: 4 (lower is better)
Translates to: GDHSKAVIVGKF*DISLRRVQVLT
Trigger: TGTTAGGACTTGTACCCTTCTTAGAGAGATGTCCAAAAACTTCCCTACAATAACTGCTTTGGAGTGGTCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR TCA 90 bp ACAAAACTTAGCAACTGCTTAAACCAAGGAATTAACGGTTCTGTGTTTTCAAGGCGGTTTTTGTCACCCTaGTTGCATCACACTGGCTTC +
Preference number: 4 (lower is better)
Translates to: TKLSNCLNQGINGSVFSRRFLSP*LHHTGF
Trigger: GAAGCCAGTGTGATGCAATCAGGGTGACAAAAACCG...CCTTGAAAACACAGAACCGTTAATTCCTTGGTTTAAGCAGTTGCTAAGTTTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263461.11
ENST00000497136.6
CDS-3UTR TCA 90 bp CTACCCATACTTCCATCTGGTGGAATCCGAGCACTGTCTTTTACTGAGTTTCCTGGAAGATCAACCAGTTaGAGTTCATTTCTCACTAAT +
Preference number: 4 (lower is better)
Translates to: LPILPSGGIRALSFTEFPGRSTS*SSFLTN
Trigger: ATTAGTGAGAAATGAACTTCAACTGGTTGATCTTCC...AGGAAACTCAGTAAAAGACAGTGCTCGGATTCCACCAGATGGAAGTATGGGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR TCA 90 bp CCTATCGGACTAAACATAAATCTTAAAACCTCCTATGGTCCTCTGAGCCTAAAAAGGCTCTTCAAGTTGTaGGATGGTGACCACTCCAAA +
Preference number: 4 (lower is better)
Translates to: PIGLNINLKTSYGPLSLKRLFKL*DGDHSK
Trigger: TTTGGAGTGGTCACCATCTCACAACTTGAAGAGCCT...TTTTAGGCTCAGAGGACCATAGGAGGTTTTAAGATTTATGTTTAGTCCGATAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263461.11
ENST00000497136.6
CDS-3UTR TCA 90 bp CTAAGTTCAGATTTACTTTCTGCCTCCTGCAGCAAGCTGATCACAGATGATTCACGGGCAGAGATGTTCTaGCTAAGTTCAGATTTACTT +
Preference number: 4 (lower is better)
Translates to: LSSDLLSASCSKLITDDSRAEMF*LSSDLL
Trigger: AAGTAAATCTGAACTTAGTCAGAACATCTCTGCCCG...TGAATCATCTGTGATCAGCTTGCTGCAGGAGGCAGAAAGTAAATCTGAACTTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR TCA 90 bp ATGCTTATGTGCTTTTGGGCACACATAGTCTTAGAACAGTGGTCAAACAGCTCACCTTCAACAGTGAGATaGTACACTTGGCCATCAATA +
Preference number: 4 (lower is better)
Translates to: MLMCFWAHIVLEQWSNSSPSTVR*YTWPSI
Trigger: TATTGATGGCCAAGTGTATCATCTCACTGTTGAAGG...TGAGCTGTTTGACCACTGTTCTAAGACTATGTGTGCCCAAAAGCACATAAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR TCA 90 bp CTGCTTAAAACCGAGGTTCTTCAAACTCCGGGCATAATCTGCATATATAGCAGTCCTTCAACAGTGAGATaGTACACTTGGCCATCAATA +
Preference number: 4 (lower is better)
Translates to: LLKTEVLQTPGIICIYSSPSTVR*YTWPSI
Trigger: TATTGATGGCCAAGTGTATCATCTCACTGTTGAAGG...ACTGCTATATATGCAGATTATGCCCGGAGTTTGAAGAACCTCGGTTTTAAGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR TCA 90 bp ATGCTTATGTGCTTTTGGGCACACATAGTCTTAGAACAGTGGTCAAACAGCTCAAGCACTGTCTTTTACTaGGTTTCCTTCAACAGTGAG +
Preference number: 4 (lower is better)
Translates to: MLMCFWAHIVLEQWSNSSSTVFY*VSFNSE
Trigger: CTCACTGTTGAAGGAAACTCAGTAAAAGACAGTGCT...TGAGCTGTTTGACCACTGTTCTAAGACTATGTGTGCCCAAAAGCACATAAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR TCA 90 bp AACTCTTGTTCATCCATTCTAAAGCACGCAGACTTCATAGACATCTCTAGGACTAAACTGCTCACCATCTaGACCTCTTTAGTATCCCAC +
Preference number: 4 (lower is better)
Translates to: NSCSSILKHADFIDISRTKLLTI*TSLVSH
Trigger: GTGGGATACTAAAGAGGTTCAGATGGTGAGCAGTTT...AGTCCTAGAGATGTCTATGAAGTCTGCGTGCTTTAGAATGGATGAACAAGAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR TCA 90 bp AAAACCGAGGTTCTTCAAACTCCGGGCATAATCTGCATATATAGCAGTGATGAGTGTATGATCATAAGTTaGCCGTTTCACTTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: KTEVLQTPGIICIYSSDECMIIS*PFHFLQ
Trigger: CTGCAGGAAGTGAAACGGTCAACTTATGATCATACA...CTCATCACTGCTATATATGCAGATTATGCCCGGAGTTTGAAGAACCTCGGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR GCA 90 bp ACAAAACTTAGCAACTGCTTAAACCAAGGAATTAACGGTTCTGTGTTTTCAAGGCTGAGCTACTCCTGCTaGTACATCCCAGACGATGAT +
Preference number: 4 (lower is better)
Translates to: TKLSNCLNQGINGSVFSRLSYSC*YIPDDD
Trigger: ATCATCGTCTGGGATGTAGCAGCAGGAGTAGCTCAG...CCTTGAAAACACAGAACCGTTAATTCCTTGGTTTAAGCAGTTGCTAAGTTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263461.11
ENST00000497136.6
CDS-3UTR GCA 90 bp CACTCTTCAATGGGTTCTTCCTTGGGGGACTCAAGCTCATTCAATAAGTCTTTGGAAAGGTCACATTTCTaGCACTTCTTAAACTGCTCA +
Preference number: 4 (lower is better)
Translates to: HSSMGSSLGDSSSFNKSLERSHF*HFLNCS
Trigger: TGAGCAGTTTAAGAAGTGGCAGAAATGTGACCTTTC...CAAAGACTTATTGAATGAGCTTGAGTCCCCCAAGGAAGAACCCATTGAAGAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR GCA 90 bp CTACCCATACTTCCATCTGGTGGAATCCGAGCACTGTCTTTTACTGAGTTTCCTATAATGCTGGTTATCTaGACTTGTTTCCAACAGCAA +
Preference number: 4 (lower is better)
Translates to: LPILPSGGIRALSFTEFPIMLVI*TCFQQQ
Trigger: TTGCTGTTGGAAACAAGTGCAGATAACCAGCATTAT...AGGAAACTCAGTAAAAGACAGTGCTCGGATTCCACCAGATGGAAGTATGGGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR GCA 90 bp CTGCTTAAAACCGAGGTTCTTCAAACTCCGGGCATAATCTGCATATATAGCAGTGGCAATCATATTCGTTaGCACCAACTTAATGGTGCT +
Preference number: 4 (lower is better)
Translates to: LLKTEVLQTPGIICIYSSGNHIR*HQLNGA
Trigger: AGCACCATTAAGTTGGTGGCAACGAATATGATTGCC...ACTGCTATATATGCAGATTATGCCCGGAGTTTGAAGAACCTCGGTTTTAAGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR GCA 90 bp CTACCCATACTTCCATCTGGTGGAATCCGAGCACTGTCTTTTACTGAGTTTCCTCAAAGTATCTCATGCTaGTCAACAGAACAAAACAAG +
Preference number: 4 (lower is better)
Translates to: LPILPSGGIRALSFTEFPQSISC*STEQNK
Trigger: CTTGTTTTGTTCTGTTGAGCAGCATGAGATACTTTG...AGGAAACTCAGTAAAAGACAGTGCTCGGATTCCACCAGATGGAAGTATGGGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497136.6
CDS-3UTR CCA 90 bp TCTCTGAAGACTTTTAAATTCCCTTTTACTAGGTGCCTGTTAAGTCTGATCAGCTATTTAGAGCTTTCTTaGCACCTGTGGCTGTGGCCA +
Preference number: 4 (lower is better)
Translates to: SLKTFKFPFTRCLLSLISYLELS*HLWLWP
Trigger: TGGCCACAGCCACAGGTGCCAAGAAAGCTCTAAATA...GCTGATCAGACTTAACAGGCACCTAGTAAAAGGGAATTTAAAAGTCTTCAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497136.6
CDS-3UTR CCA 90 bp TTAATCATTTCGATGGCAGATTCATCATTGCCTCTTTCACCACGAAAAGCAATGGCAGAATTGAACCTCTaGGATGTTCTTCCCCAGCAA +
Preference number: 4 (lower is better)
Translates to: LIISMADSSLPLSPRKAMAELNL*DVLPQQ
Trigger: TTGCTGGGGAAGAACATCCCAGAGGTTCAATTCTGC...CATTGCTTTTCGTGGTGAAAGAGGCAATGATGAATCTGCCATCGAAATGATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497136.6
CDS-3UTR CCA 90 bp ACCTCACCTATCGGACTAAACATAAATCTTAAAACCTCCTATGGTCCTCTGAGCAATGCTCCTACCTGTTaGAAGATCAACCAGTTGAAG +
Preference number: 4 (lower is better)
Translates to: TSPIGLNINLKTSYGPLSNAPTC*KINQLK
Trigger: CTTCAACTGGTTGATCTTCCAACAGGTAGGAGCATT...GCTCAGAGGACCATAGGAGGTTTTAAGATTTATGTTTAGTCCGATAGGTGAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263461.11
ENST00000497136.6
CDS-3UTR CCA 90 bp ACAAAACTTAGCAACTGCTTAAACCAAGGAATTAACGGTTCTGTGTTTTCAAGGCCCAACTTCGGTGTGTaGGTATTCCTCTGGATACTC +
Preference number: 4 (lower is better)
Translates to: TKLSNCLNQGINGSVFSRPNFGV*VFLWIL
Trigger: GAGTATCCAGAGGAATACCCACACACCGAAGTTGGG...CCTTGAAAACACAGAACCGTTAATTCCTTGGTTTAAGCAGTTGCTAAGTTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263461.11
ENST00000497136.6
CDS-3UTR CCA 90 bp ATGCTTATGTGCTTTTGGGCACACATAGTCTTAGAACAGTGGTCAAACAGCTCATGTCCATTCCAAGGCTaGTGTAATAAGAAGGCTTTC +
Preference number: 4 (lower is better)
Translates to: MLMCFWAHIVLEQWSNSSCPFQG*CNKKAF
Trigger: GAAAGCCTTCTTATTACACCAGCCTTGGAATGGACA...TGAGCTGTTTGACCACTGTTCTAAGACTATGTGTGCCCAAAAGCACATAAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR CCA 90 bp AAAACCGAGGTTCTTCAAACTCCGGGCATAATCTGCATATATAGCAGTGATGAGTGTCCATTCCAAGGCTaGTGTAATAAGAAGGCTTTC +
Preference number: 4 (lower is better)
Translates to: KTEVLQTPGIICIYSSDECPFQG*CNKKAF
Trigger: GAAAGCCTTCTTATTACACCAGCCTTGGAATGGACA...CTCATCACTGCTATATATGCAGATTATGCCCGGAGTTTGAAGAACCTCGGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR CCA 90 bp CCTATCGGACTAAACATAAATCTTAAAACCTCCTATGGTCCTCTGAGCCTAAAACAATGGGTTCTTCCTTaGGGGACTCAAGCTCATTCA +
Preference number: 4 (lower is better)
Translates to: PIGLNINLKTSYGPLSLKQWVLP*GTQAHS
Trigger: TGAATGAGCTTGAGTCCCCCAAGGAAGAACCCATTG...TTTTAGGCTCAGAGGACCATAGGAGGTTTTAAGATTTATGTTTAGTCCGATAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263461.11
ENST00000497136.6
3UTR CAA 72 bp CCCATGTACCCCTGTCCAGAGTTGACAAGTAATCTTTaGTCATATTTCCGTAATCTACCTCCCTTAGTTTTG +
Preference number: 4 (lower is better)
Translates to: PMYPCPELTSNL*SYFRNLPPLVL
Trigger: CAAAACTAAGGGAGGTAGATTACGGAAATATGACAAAAGATTACTTGTCAACTCTGGACAGGGGTACATGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497136.6
3UTR CAA 72 bp CATTTATTAAGCTGTCACTCTTCAATGGGTTCTTCCTaGGGGGACTCAAGCTCATTCAATAAGTCTTTGCCA +
Preference number: 4 (lower is better)
Translates to: HLLSCHSSMGSS*GDSSSFNKSLP
Trigger: TGGCAAAGACTTATTGAATGAGCTTGAGTCCCCCAAGGAAGAACCCATTGAAGAGTGACAGCTTAATAAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR TCA 90 bp ATGCTTATGTGCTTTTGGGCACACATAGTCTTAGAACAGTGGTCAAACAGCTCAAGAACTACTGTTCCGTaGATTTCGATTACAAACTGC +
Preference number: 4 (lower is better)
Translates to: MLMCFWAHIVLEQWSNSSRTTVP*ISITNC
Trigger: GCAGTTTGTAATCGAAATTCACGGAACAGTAGTTCT...TGAGCTGTTTGACCACTGTTCTAAGACTATGTGTGCCCAAAAGCACATAAGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263461.11
CDS-3UTR TCA 90 bp ACAAAACTTAGCAACTGCTTAAACCAAGGAATTAACGGTTCTGTGTTTTCAAGGCCTCCTGCAGCAAGCTaGTCACAGATGATTCAACAA +
Preference number: 4 (lower is better)
Translates to: TKLSNCLNQGINGSVFSRPPAAS*SQMIQQ
Trigger: TTGTTGAATCATCTGTGATCAGCTTGCTGCAGGAGG...CCTTGAAAACACAGAACCGTTAATTCCTTGGTTTAAGCAGTTGCTAAGTTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263461.11
ENST00000497136.6
CDS-3UTR TCA 90 bp AAACTTACTCTCAACATAGATGCTTATGTGCTTTTGGGCACACATAGTCTTAGAGATGCACCCATCATCTaGGGCCAAGATCACTTTATC +
Preference number: 4 (lower is better)
Translates to: KLTLNIDAYVLLGTHSLRDAPII*GQDHFI
Trigger: GATAAAGTGATCTTGGCCTCAGATGATGGGTGCATC...TCTAAGACTATGTGTGCCCAAAAGCACATAAGCATCTATGTTGAGAGTAAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR TCA 90 bp CAGGGGTTTATCTCTGAATACGACTGCCAAATACTGCTTCAAATGAGATACTTTACCTCTGCAAGAGAGTaGATTCTGGATCAAGCAACA +
Preference number: 4 (lower is better)
Translates to: QGFISEYDCQILLQMRYFTSARE*ILDQAT
Trigger: TGTTGCTTGATCCAGAATTCACTCTCTTGCAGAGGT...AAAGTATCTCATTTGAAGCAGTATTTGGCAGTCGTATTCAGAGATAAACCCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR TCA 90 bp AAAACCGAGGTTCTTCAAACTCCGGGCATAATCTGCATATATAGCAGTGATGAGCCTTTGATTTCTGATTaGCTTGTGGAGAACAAAGGT +
Preference number: 4 (lower is better)
Translates to: KTEVLQTPGIICIYSSDEPLISD*LVENKG
Trigger: ACCTTTGTTCTCCACAAGTCAATCAGAAATCAAAGG...CTCATCACTGCTATATATGCAGATTATGCCCGGAGTTTGAAGAACCTCGGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR TCA 90 bp CTAAGTTCAGATTTACTTTCTGCCTCCTGCAGCAAGCTGATCACAGATGATTCAAGAGCCTTTGATTTCTaGTTGACTTGTGGAGAACAA +
Preference number: 4 (lower is better)
Translates to: LSSDLLSASCSKLITDDSRAFDF*LTCGEQ
Trigger: TTGTTCTCCACAAGTCAATCAGAAATCAAAGGCTCT...TGAATCATCTGTGATCAGCTTGCTGCAGGAGGCAGAAAGTAAATCTGAACTTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR TCA 90 bp TTAATCATTTCGATGGCAGATTCATCATTGCCTCTTTCACCACGAAAAGCAATGCTTTGCCCTGTTCCGTaGATTTCGATTACAAACTGC +
Preference number: 4 (lower is better)
Translates to: LIISMADSSLPLSPRKAMLCPVP*ISITNC
Trigger: GCAGTTTGTAATCGAAATTCACGGAACAGGGCAAAG...CATTGCTTTTCGTGGTGAAAGAGGCAATGATGAATCTGCCATCGAAATGATTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497136.6
CDS-3UTR TCA 90 bp AACTCTTGTTCATCCATTCTAAAGCACGCAGACTTCATAGACATCTCTAGGACTACCCCTGTCCAGAGTTaGCAAGTAATCTTTTGTCAT +
Preference number: 4 (lower is better)
Translates to: NSCSSILKHADFIDISRTTPVQS*QVIFCH
Trigger: ATGACAAAAGATTACTTGTCAACTCTGGACAGGGGT...AGTCCTAGAGATGTCTATGAAGTCTGCGTGCTTTAGAATGGATGAACAAGAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497136.6
CDS-3UTR GCA 90 bp AAACTTACTCTCAACATAGATGCTTATGTGCTTTTGGGCACACATAGTCTTAGAAGCAGGAACTTGAGGTaGACTTCCCGCAGAATTGAA +
Preference number: 4 (lower is better)
Translates to: KLTLNIDAYVLLGTHSLRSRNLR*TSRRIE
Trigger: TTCAATTCTGCGGGAAGTGCACCTCAAGTTCCTGCT...TCTAAGACTATGTGTGCCCAAAAGCACATAAGCATCTATGTTGAGAGTAAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263461.11
ENST00000497136.6
CDS-3UTR GCA 90 bp ACAAAACTTAGCAACTGCTTAAACCAAGGAATTAACGGTTCTGTGTTTTCAAGGAGCAGGAACTTGAGGTaGACTTCCCGCAGAATTGAA +
Preference number: 4 (lower is better)
Translates to: TKLSNCLNQGINGSVFSRSRNLR*TSRRIE
Trigger: TTCAATTCTGCGGGAAGTGCACCTCAAGTTCCTGCT...CCTTGAAAACACAGAACCGTTAATTCCTTGGTTTAAGCAGTTGCTAAGTTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263461.11
ENST00000497136.6
CDS-3UTR GCA 90 bp CCTATCGGACTAAACATAAATCTTAAAACCTCCTATGGTCCTCTGAGCCTAAAAATATATCCAGTGGGTTaGTCAGTTTGTCTCGAGGAG +
Preference number: 4 (lower is better)
Translates to: PIGLNINLKTSYGPLSLKIYPVG*SVCLEE
Trigger: CTCCTCGAGACAAACTGAGCAACCCACTGGATATAT...TTTTAGGCTCAGAGGACCATAGGAGGTTTTAAGATTTATGTTTAGTCCGATAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263461.11
ENST00000497136.6
CDS-3UTR GCA 90 bp TCTCTGAAGACTTTTAAATTCCCTTTTACTAGGTGCCTGTTAAGTCTGATCAGCGACCGTTTCACTTCCTaGAGATTAACCCTTTCTAGC +
Preference number: 4 (lower is better)
Translates to: SLKTFKFPFTRCLLSLISDRFTS*RLTLSS
Trigger: GCTAGAAAGGGTTAATCTGCAGGAAGTGAAACGGTC...GCTGATCAGACTTAACAGGCACCTAGTAAAAGGGAATTTAAAAGTCTTCAGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497136.6
CDS-3UTR GCA 90 bp AAACTTACTCTCAACATAGATGCTTATGTGCTTTTGGGCACACATAGTCTTAGACGCCCTCTGCCAATTTaGCATTGGCAATCATATTCG +
Preference number: 4 (lower is better)
Translates to: KLTLNIDAYVLLGTHSLRRPLPI*HWQSYS
Trigger: CGAATATGATTGCCAATGGCAAATTGGCAGAGGGCG...TCTAAGACTATGTGTGCCCAAAAGCACATAAGCATCTATGTTGAGAGTAAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR GCA 90 bp ACAAAACTTAGCAACTGCTTAAACCAAGGAATTAACGGTTCTGTGTTTTCAAGGATTCAAACGGACTTTTaGCAGCCATGCAGCCCGATT +
Preference number: 4 (lower is better)
Translates to: TKLSNCLNQGINGSVFSRIQTDF*QPCSPI
Trigger: AATCGGGCTGCATGGCTGGCAAAAGTCCGTTTGAAT...CCTTGAAAACACAGAACCGTTAATTCCTTGGTTTAAGCAGTTGCTAAGTTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263461.11
ENST00000497136.6
CDS-3UTR GCA 90 bp CCTATCGGACTAAACATAAATCTTAAAACCTCCTATGGTCCTCTGAGCCTAAAACTCAGTGACTTCAAATaGTCCATACTTGAGGCAAGC +
Preference number: 4 (lower is better)
Translates to: PIGLNINLKTSYGPLSLKLSDFK*SILEAS
Trigger: GCTTGCCTCAAGTATGGAGCATTTGAAGTCACTGAG...TTTTAGGCTCAGAGGACCATAGGAGGTTTTAAGATTTATGTTTAGTCCGATAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263461.11
ENST00000497136.6
CDS-3UTR GCA 90 bp CAGGGGTTTATCTCTGAATACGACTGCCAAATACTGCTTCAAATGAGATACTTTCTCAGTGACTTCAAATaGTCCATACTTGAGGCAAGC +
Preference number: 4 (lower is better)
Translates to: QGFISEYDCQILLQMRYFLSDFK*SILEAS
Trigger: GCTTGCCTCAAGTATGGAGCATTTGAAGTCACTGAG...AAAGTATCTCATTTGAAGCAGTATTTGGCAGTCGTATTCAGAGATAAACCCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR GCA 90 bp TTAATCATTTCGATGGCAGATTCATCATTGCCTCTTTCACCACGAAAAGCAATGCTCAGTGACTTCAAATaGTCCATACTTGAGGCAAGC +
Preference number: 4 (lower is better)
Translates to: LIISMADSSLPLSPRKAMLSDFK*SILEAS
Trigger: GCTTGCCTCAAGTATGGAGCATTTGAAGTCACTGAG...CATTGCTTTTCGTGGTGAAAGAGGCAATGATGAATCTGCCATCGAAATGATTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR CCA 90 bp ACAAAACTTAGCAACTGCTTAAACCAAGGAATTAACGGTTCTGTGTTTTCAAGGTCTTCTTCCATAGTTTaGTGCCAGTGTCGGCATTCC +
Preference number: 4 (lower is better)
Translates to: TKLSNCLNQGINGSVFSRSSSIV*CQCRHS
Trigger: GGAATGCCGACACTGGCACCAAACTATGGAAGAAGA...CCTTGAAAACACAGAACCGTTAATTCCTTGGTTTAAGCAGTTGCTAAGTTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263461.11
ENST00000497136.6
CDS-3UTR CCA 90 bp AAACTTACTCTCAACATAGATGCTTATGTGCTTTTGGGCACACATAGTCTTAGAGCAGAATTGAACCTCTaGGATGTTCTTCCCCAGCAA +
Preference number: 4 (lower is better)
Translates to: KLTLNIDAYVLLGTHSLRAELNL*DVLPQQ
Trigger: TTGCTGGGGAAGAACATCCCAGAGGTTCAATTCTGC...TCTAAGACTATGTGTGCCCAAAAGCACATAAGCATCTATGTTGAGAGTAAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263461.11
ENST00000497136.6
CDS-3UTR CCA 90 bp TTAATCATTTCGATGGCAGATTCATCATTGCCTCTTTCACCACGAAAAGCAATGCATACTTCCATCTGGTaGAATCCGAGCACTGTCTTT +
Preference number: 4 (lower is better)
Translates to: LIISMADSSLPLSPRKAMHTSIW*NPSTVF
Trigger: AAAGACAGTGCTCGGATTCCACCAGATGGAAGTATG...CATTGCTTTTCGTGGTGAAAGAGGCAATGATGAATCTGCCATCGAAATGATTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR CCA 90 bp CAGGGGTTTATCTCTGAATACGACTGCCAAATACTGCTTCAAATGAGATACTTTGTGTGGGTATTCCTCTaGATACTCTGCCTTTCAAGT +
Preference number: 4 (lower is better)
Translates to: QGFISEYDCQILLQMRYFVWVFL*ILCLSS
Trigger: ACTTGAAAGGCAGAGTATCCAGAGGAATACCCACAC...AAAGTATCTCATTTGAAGCAGTATTTGGCAGTCGTATTCAGAGATAAACCCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR CCA 90 bp CAGGGGTTTATCTCTGAATACGACTGCCAAATACTGCTTCAAATGAGATACTTTCCAGGTCAGATTCCCTaGCATTTATTAAGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: QGFISEYDCQILLQMRYFPGQIP*HLLSCH
Trigger: GTGACAGCTTAATAAATGCCAGGGAATCTGACCTGG...AAAGTATCTCATTTGAAGCAGTATTTGGCAGTCGTATTCAGAGATAAACCCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR CCA 90 bp TTGACTTCACATGAGTGGATGCTTAACTCTTTGTGTAGCAGACCACTGGTGAGAATGCTTATGTGCTTTTaGGCACACATAGTCTTAGAA +
Preference number: 4 (lower is better)
Translates to: LTSHEWMLNSLCSRPLVRMLMCF*AHIVLE
Trigger: TTCTAAGACTATGTGTGCCCAAAAGCACATAAGCAT...TCTCACCAGTGGTCTGCTACACAAAGAGTTAAGCATCCACTCATGTGAAGTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR CCA 90 bp AAACTTACTCTCAACATAGATGCTTATGTGCTTTTGGGCACACATAGTCTTAGATGTGATTTACATCACTaGTGGGCAGCAGCATCGAAG +
Preference number: 4 (lower is better)
Translates to: KLTLNIDAYVLLGTHSLRCDLHH*WAAASK
Trigger: CTTCGATGCTGCTGCCCACCAGTGATGTAAATCACA...TCTAAGACTATGTGTGCCCAAAAGCACATAAGCATCTATGTTGAGAGTAAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497136.6
CDS-3UTR TCA 90 bp CCTATCGGACTAAACATAAATCTTAAAACCTCCTATGGTCCTCTGAGCCTAAAAAATAAACCATCACGCTaGAAGCAGGGTATTACCTGT +
Preference number: 4 (lower is better)
Translates to: PIGLNINLKTSYGPLSLKNKPSR*KQGITC
Trigger: ACAGGTAATACCCTGCTTTCAGCGTGATGGTTTATT...TTTTAGGCTCAGAGGACCATAGGAGGTTTTAAGATTTATGTTTAGTCCGATAGG
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000263461.11
ENST00000497136.6
CDS-3UTR TCA 90 bp AAACTTACTCTCAACATAGATGCTTATGTGCTTTTGGGCACACATAGTCTTAGATCCATTCAATACCCTTaGCTTCACATGAGTGGATGC +
Preference number: 4 (lower is better)
Translates to: KLTLNIDAYVLLGTHSLRSIQYP*LHMSGC
Trigger: GCATCCACTCATGTGAAGTCAAGGGTATTGAATGGA...TCTAAGACTATGTGTGCCCAAAAGCACATAAGCATCTATGTTGAGAGTAAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR TCA 90 bp ATGCTTATGTGCTTTTGGGCACACATAGTCTTAGAACAGTGGTCAAACAGCTCAGGAAGATCAACCAGTTaGAGTTCATTTCTCACTAAT +
Preference number: 4 (lower is better)
Translates to: MLMCFWAHIVLEQWSNSSGRSTS*SSFLTN
Trigger: ATTAGTGAGAAATGAACTTCAACTGGTTGATCTTCC...TGAGCTGTTTGACCACTGTTCTAAGACTATGTGTGCCCAAAAGCACATAAGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR TCA 90 bp ACAAAACTTAGCAACTGCTTAAACCAAGGAATTAACGGTTCTGTGTTTTCAAGGCAAGTTGTGAGATGGTaGCCACTCCAAAGCAGTTAT +
Preference number: 4 (lower is better)
Translates to: TKLSNCLNQGINGSVFSRQVVRW*PLQSSY
Trigger: ATAACTGCTTTGGAGTGGTCACCATCTCACAACTTG...CCTTGAAAACACAGAACCGTTAATTCCTTGGTTTAAGCAGTTGCTAAGTTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263461.11
ENST00000497136.6
CDS-3UTR TCA 90 bp AAACTTACTCTCAACATAGATGCTTATGTGCTTTTGGGCACACATAGTCTTAGAAACCAGGAGAGCCTTTaGTTTCTGATTGACTTGTGG +
Preference number: 4 (lower is better)
Translates to: KLTLNIDAYVLLGTHSLRNQESL*FLIDLW
Trigger: CCACAAGTCAATCAGAAATCAAAGGCTCTCCTGGTT...TCTAAGACTATGTGTGCCCAAAAGCACATAAGCATCTATGTTGAGAGTAAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR TCA 90 bp AAACTTACTCTCAACATAGATGCTTATGTGCTTTTGGGCACACATAGTCTTAGATCTCTGTGTCCTCAGTaGCTTCAAATGCTCCATACT +
Preference number: 4 (lower is better)
Translates to: KLTLNIDAYVLLGTHSLRSLCPQ*LQMLHT
Trigger: AGTATGGAGCATTTGAAGTCACTGAGGACACAGAGA...TCTAAGACTATGTGTGCCCAAAAGCACATAAGCATCTATGTTGAGAGTAAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR TCA 90 bp ACAAAACTTAGCAACTGCTTAAACCAAGGAATTAACGGTTCTGTGTTTTCAAGGCATTCACGTTCTTTCTaGGACCAACGCAGGATACAA +
Preference number: 4 (lower is better)
Translates to: TKLSNCLNQGINGSVFSRHSRSF*DQRRIQ
Trigger: TTGTATCCTGCGTTGGTCTCAGAAAGAACGTGAATG...CCTTGAAAACACAGAACCGTTAATTCCTTGGTTTAAGCAGTTGCTAAGTTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263461.11
ENST00000497136.6
CDS-3UTR GCA 90 bp ATGCTTATGTGCTTTTGGGCACACATAGTCTTAGAACAGTGGTCAAACAGCTCAATCTCTGAATACGACTaGCAAATACTGCTTCAAATG +
Preference number: 4 (lower is better)
Translates to: MLMCFWAHIVLEQWSNSSISEYD*QILLQM
Trigger: CATTTGAAGCAGTATTTGGCAGTCGTATTCAGAGAT...TGAGCTGTTTGACCACTGTTCTAAGACTATGTGTGCCCAAAAGCACATAAGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR GCA 90 bp CCTATCGGACTAAACATAAATCTTAAAACCTCCTATGGTCCTCTGAGCCTAAAATTCCTCTGGATACTCTaGCTTTCAAGTCCCAGAAAT +
Preference number: 4 (lower is better)
Translates to: PIGLNINLKTSYGPLSLKFLWIL*LSSPRN
Trigger: ATTTCTGGGACTTGAAAGGCAGAGTATCCAGAGGAA...TTTTAGGCTCAGAGGACCATAGGAGGTTTTAAGATTTATGTTTAGTCCGATAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263461.11
ENST00000497136.6
CDS-3UTR GCA 90 bp AAACTTACTCTCAACATAGATGCTTATGTGCTTTTGGGCACACATAGTCTTAGAAAGAGAACTGCTCCCTaGTTAAAACCGAGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: KLTLNIDAYVLLGTHSLRKRTAP*LKPRFF
Trigger: GAAGAACCTCGGTTTTAAGCAGGGAGCAGTTCTCTT...TCTAAGACTATGTGTGCCCAAAAGCACATAAGCATCTATGTTGAGAGTAAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR GCA 90 bp ACAAAACTTAGCAACTGCTTAAACCAAGGAATTAACGGTTCTGTGTTTTCAAGGCATTCAATAAGTCTTTaGCAGCTGCTCCGGCTTTTG +
Preference number: 4 (lower is better)
Translates to: TKLSNCLNQGINGSVFSRHSISL*QLLRLL
Trigger: CAAAAGCCGGAGCAGCTGGCAAAGACTTATTGAATG...CCTTGAAAACACAGAACCGTTAATTCCTTGGTTTAAGCAGTTGCTAAGTTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263461.11
ENST00000497136.6
CDS-3UTR CCA 90 bp AAACTTACTCTCAACATAGATGCTTATGTGCTTTTGGGCACACATAGTCTTAGAAGCTGGGCTAGAGTGTaGGCTGGATATGTAAACTTT +
Preference number: 4 (lower is better)
Translates to: KLTLNIDAYVLLGTHSLRSWARV*AGYVNF
Trigger: AAAGTTTACATATCCAGCCCACACTCTAGCCCAGCT...TCTAAGACTATGTGTGCCCAAAAGCACATAAGCATCTATGTTGAGAGTAAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263461.11
ENST00000497136.6
CDS-3UTR CCA 90 bp CTAAGTTCAGATTTACTTTCTGCCTCCTGCAGCAAGCTGATCACAGATGATTCATTGACTTCACATGAGTaGATGCTTAACTCTTTGTGT +
Preference number: 4 (lower is better)
Translates to: LSSDLLSASCSKLITDDSLTSHE*MLNSLC
Trigger: ACACAAAGAGTTAAGCATCCACTCATGTGAAGTCAA...TGAATCATCTGTGATCAGCTTGCTGCAGGAGGCAGAAAGTAAATCTGAACTTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR CCA 90 bp TTAATCATTTCGATGGCAGATTCATCATTGCCTCTTTCACCACGAAAAGCAATGAATGCTCCTACCTGTTaGAAGATCAACCAGTTGAAG +
Preference number: 4 (lower is better)
Translates to: LIISMADSSLPLSPRKAMNAPTC*KINQLK
Trigger: CTTCAACTGGTTGATCTTCCAACAGGTAGGAGCATT...CATTGCTTTTCGTGGTGAAAGAGGCAATGATGAATCTGCCATCGAAATGATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR CCA 90 bp AAACTTACTCTCAACATAGATGCTTATGTGCTTTTGGGCACACATAGTCTTAGAGTGTGGGTATTCCTCTaGATACTCTGCCTTTCAAGT +
Preference number: 4 (lower is better)
Translates to: KLTLNIDAYVLLGTHSLRVWVFL*ILCLSS
Trigger: ACTTGAAAGGCAGAGTATCCAGAGGAATACCCACAC...TCTAAGACTATGTGTGCCCAAAAGCACATAAGCATCTATGTTGAGAGTAAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR CCA 90 bp CCTATCGGACTAAACATAAATCTTAAAACCTCCTATGGTCCTCTGAGCCTAAAAATAGTCTTAGAACAGTaGTCAAACAGCTCACAGGAC +
Preference number: 4 (lower is better)
Translates to: PIGLNINLKTSYGPLSLKIVLEQ*SNSSQD
Trigger: GTCCTGTGAGCTGTTTGACCACTGTTCTAAGACTAT...TTTTAGGCTCAGAGGACCATAGGAGGTTTTAAGATTTATGTTTAGTCCGATAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263461.11
ENST00000497136.6
CDS-3UTR TCA 90 bp AAACTTACTCTCAACATAGATGCTTATGTGCTTTTGGGCACACATAGTCTTAGAAGCACTGTCTTTTACTaGGTTTCCTTCAACAGTGAG +
Preference number: 4 (lower is better)
Translates to: KLTLNIDAYVLLGTHSLRSTVFY*VSFNSE
Trigger: CTCACTGTTGAAGGAAACTCAGTAAAAGACAGTGCT...TCTAAGACTATGTGTGCCCAAAAGCACATAAGCATCTATGTTGAGAGTAAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR TCA 90 bp ACAAAACTTAGCAACTGCTTAAACCAAGGAATTAACGGTTCTGTGTTTTCAAGGTGTATGATCATAAGTTaGCCGTTTCACTTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: TKLSNCLNQGINGSVFSRCMIIS*PFHFLQ
Trigger: CTGCAGGAAGTGAAACGGTCAACTTATGATCATACA...CCTTGAAAACACAGAACCGTTAATTCCTTGGTTTAAGCAGTTGCTAAGTTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263461.11
ENST00000497136.6
CDS-3UTR TCA 90 bp CAGGGGTTTATCTCTGAATACGACTGCCAAATACTGCTTCAAATGAGATACTTTAGAGCCTTTGATTTCTaGTTGACTTGTGGAGAACAA +
Preference number: 4 (lower is better)
Translates to: QGFISEYDCQILLQMRYFRAFDF*LTCGEQ
Trigger: TTGTTCTCCACAAGTCAATCAGAAATCAAAGGCTCT...AAAGTATCTCATTTGAAGCAGTATTTGGCAGTCGTATTCAGAGATAAACCCCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR GCA 90 bp AAACTTACTCTCAACATAGATGCTTATGTGCTTTTGGGCACACATAGTCTTAGATGGCAGATTCATCATTaGCTCTTTCACCACGAAAAG +
Preference number: 4 (lower is better)
Translates to: KLTLNIDAYVLLGTHSLRWQIHH*LFHHEK
Trigger: CTTTTCGTGGTGAAAGAGGCAATGATGAATCTGCCA...TCTAAGACTATGTGTGCCCAAAAGCACATAAGCATCTATGTTGAGAGTAAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR GCA 90 bp CTAAGTTCAGATTTACTTTCTGCCTCCTGCAGCAAGCTGATCACAGATGATTCATATCAAAGTATCTCATaGTGCTCAACAGAACAAAAC +
Preference number: 4 (lower is better)
Translates to: LSSDLLSASCSKLITDDSYQSIS*CSTEQN
Trigger: GTTTTGTTCTGTTGAGCAGCATGAGATACTTTGATA...TGAATCATCTGTGATCAGCTTGCTGCAGGAGGCAGAAAGTAAATCTGAACTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497136.6
CDS-3UTR CCA 90 bp CAGGGGTTTATCTCTGAATACGACTGCCAAATACTGCTTCAAATGAGATACTTTTTTTGTGGTCAACGGTaGACACATACGAATAGCAAA +
Preference number: 4 (lower is better)
Translates to: QGFISEYDCQILLQMRYFFCGQR*THTNSK
Trigger: TTTGCTATTCGTATGTGTCCACCGTTGACCACAAAA...AAAGTATCTCATTTGAAGCAGTATTTGGCAGTCGTATTCAGAGATAAACCCCTG
39% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
3UTR CAA 72 bp TACAAACTTACTCTCAACATAGATGCTTATGTGCTTTaGGGCACACATAGTCTTAGAACAGTGGTCAAACAG +
Preference number: 4 (lower is better)
Translates to: YKLTLNIDAYVL*GTHSLRTVVKQ
Trigger: CTGTTTGACCACTGTTCTAAGACTATGTGTGCCCAAAAGCACATAAGCATCTATGTTGAGAGTAAGTTTGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR GCA 90 bp ACAAAACTTAGCAACTGCTTAAACCAAGGAATTAACGGTTCTGTGTTTTCAAGGAAAATGGAACTCCTGTaGGTTCTATTGCAATCACAC +
Preference number: 4 (lower is better)
Translates to: TKLSNCLNQGINGSVFSRKMELL*VLLQSH
Trigger: GTGTGATTGCAATAGAACGCACAGGAGTTCCATTTT...CCTTGAAAACACAGAACCGTTAATTCCTTGGTTTAAGCAGTTGCTAAGTTTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263461.11
ENST00000497136.6
CDS-3UTR GCA 90 bp CAGGGGTTTATCTCTGAATACGACTGCCAAATACTGCTTCAAATGAGATACTTTATAATGCTGGTTATCTaGACTTGTTTCCAACAGCAA +
Preference number: 4 (lower is better)
Translates to: QGFISEYDCQILLQMRYFIMLVI*TCFQQQ
Trigger: TTGCTGTTGGAAACAAGTGCAGATAACCAGCATTAT...AAAGTATCTCATTTGAAGCAGTATTTGGCAGTCGTATTCAGAGATAAACCCCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR CCA 90 bp TCTCTGAAGACTTTTAAATTCCCTTTTACTAGGTGCCTGTTAAGTCTGATCAGCCAAGAGAGTGAATTCTaGATCAAGCAACAGTTTCTT +
Preference number: 4 (lower is better)
Translates to: SLKTFKFPFTRCLLSLISQESEF*IKQQFL
Trigger: AAGAAACTGTTGCTTGATCCAGAATTCACTCTCTTG...GCTGATCAGACTTAACAGGCACCTAGTAAAAGGGAATTTAAAAGTCTTCAGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497136.6
CDS-3UTR CCA 90 bp TTAATCATTTCGATGGCAGATTCATCATTGCCTCTTTCACCACGAAAAGCAATGATGCTTATGTGCTTTTaGGCACACATAGTCTTAGAA +
Preference number: 4 (lower is better)
Translates to: LIISMADSSLPLSPRKAMMLMCF*AHIVLE
Trigger: TTCTAAGACTATGTGTGCCCAAAAGCACATAAGCAT...CATTGCTTTTCGTGGTGAAAGAGGCAATGATGAATCTGCCATCGAAATGATTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS CCA 90 bp CCCCTGGAAGCTCGGCGTCCTCACCAGTCCACCGCCGCCTTGTTGTaGGCGTTGAGGGCCCCCGTGAGGGTGCGCGCCGACACCTTGAAG +
Preference number: 5 (lower is better)
Translates to: PLEARRPHQSTAALL*ALRAPVRVRADTLK
Trigger: CTTCAAGGTGTCGGCGCGCACCCTCACGGGGGCCCTCAACGCCCACAACAAGGCGGCGGTGGACTGGTGAGGACGCCGAGCTTCCAGGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000605178.5
ENST00000605202.5
CDS CCA 90 bp GAAGTTCACTGTGTAGGGCAACATCCCGGCGGCCAGCCCAGGACCTaGGCGCTGACCCGCAACCAGGAAGCGGCGGACACTGTGCTTCCG +
Preference number: 5 (lower is better)
Translates to: EVHCVGQHPGGQPRT*ALTRNQEAADTVLP
Trigger: CGGAAGCACAGTGTCCGCCGCTTCCTGGTTGCGGGTCAGCGCCCAGGTCCTGGGCTGGCCGCCGGGATGTTGCCCTACACAGTGAACTTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605202.5
CDS CCA 90 bp CCTCTTGTCCTTCCCCCTTCCCCCTCACACATTCCTGGCCGATCCTaGCGACCTGGAAGCTCGGCGTCCTCACCAGTCCACCGCCGCCTT +
Preference number: 5 (lower is better)
Translates to: PLVLPPSPSHIPGRS*RPGSSASSPVHRRL
Trigger: AAGGCGGCGGTGGACTGGTGAGGACGCCGAGCTTCCAGGTCGCCAGGATCGGCCAGGAATGTGTGAGGGGGAAGGGGGAAGGACAAGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000604585.5
CDS CCA 90 bp TCACAGGCTCCCAGAAGCAGGAAGGGTGAGTCGCGTCTGCTCTGCTaGCTGCTCGGAAGGGACCTGGTGTCCACAGCGGGCAGCACAGGA +
Preference number: 5 (lower is better)
Translates to: SQAPRSRKGESRLLC*LLGRDLVSTAGSTG
Trigger: TCCTGTGCTGCCCGCTGTGGACACCAGGTCCCTTCCGAGCAGCCAGCAGAGCAGACGCGACTCACCCTTCCTGCTTCTGGGAGCCTGTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604714.1
CDS-3UTR CAA 90 bp GCTCACAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACGGTGGCCACAGCCCAGTCCACCGCCGCCTaGTTGTGGGCGTTGAGGGCC +
Preference number: 5 (lower is better)
Translates to: AHRTLYSSSSWTVTVATAQSTAA*LWALRA
Trigger: GGCCCTCAACGCCCACAACAAGGCGGCGGTGGACTG...GGCTGTGGCCACCGTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTGTGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263461.11
ENST00000605543.5
CDS GCA 90 bp GAGACTCTTCACAGGCTCCCAGAAGCAGGAAGGGTGAGTCGCGTCTaGTCTGCTGGCTGCTCGGAAGGGACCTGGTGTCCACAGCGGGCA +
Preference number: 5 (lower is better)
Translates to: ETLHRLPEAGRVSRV*SAGCSEGTWCPQRA
Trigger: TGCCCGCTGTGGACACCAGGTCCCTTCCGAGCAGCCAGCAGAGCAGACGCGACTCACCCTTCCTGCTTCTGGGAGCCTGTGAAGAGTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604714.1
CDS TCA 90 bp AGGGCTGTGATGAGACTCTTCACAGGCTCCCAGAAGCAGGAAGGGTaGGTCGCGTCTGCTCTGCTGGCTGCTCGGAAGGGACCTGGTGTC +
Preference number: 5 (lower is better)
Translates to: RAVMRLFTGSQKQEG*VASALLAARKGPGV
Trigger: GACACCAGGTCCCTTCCGAGCAGCCAGCAGAGCAGACGCGACTCACCCTTCCTGCTTCTGGGAGCCTGTGAAGAGTCTCATCACAGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604714.1
CDS-3UTR CAA 90 bp CAGTGGTCAAACAGCTCACAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACTCCACCGCCGCCTTGTaGTGGGCGTTGAGGGCCCCC +
Preference number: 5 (lower is better)
Translates to: QWSNSSQDPVLLFILDCDSTAAL*WALRAP
Trigger: GGGGGCCCTCAACGCCCACAACAAGGCGGCGGTGGA...GTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTGTGAGCTGTTTGACCACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263461.11
ENST00000605543.5
CDS-3UTR CAA 90 bp AGCTCACAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACGGTGGCCACAGCCCCGTCAGCAGGAACTaGAGGTGCACTTCCCGCAGA +
Preference number: 5 (lower is better)
Translates to: SSQDPVLLFILDCDGGHSPVSRN*RCTSRR
Trigger: TCTGCGGGAAGTGCACCTCAAGTTCCTGCTGACGGG...GCTGTGGCCACCGTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTGTGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263461.11
ENST00000497136.6
CDS GCA 90 bp GGTGCGGGCAGTCCTGAAAGCAGTCCCGTCAGCAGGAACTTGAGGTaGACTTCCCGCAGAATTGAACCTCTGGGATGTTCTTCCCCAGCA +
Preference number: 5 (lower is better)
Translates to: GAGSPESSPVSRNLR*TSRRIEPLGCSSPA
Trigger: TGCTGGGGAAGAACATCCCAGAGGTTCAATTCTGCGGGAAGTGCACCTCAAGTTCCTGCTGACGGGACTGCTTTCAGGACTGCCCGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000604220.5
ENST00000604585.5
CDS-3UTR CAA 90 bp GCTCACAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACGGTGGCCACAGCCAGGCTTGGCATGCTCTaGGATCTCACACTGAGCTAC +
Preference number: 5 (lower is better)
Translates to: AHRTLYSSSSWTVTVATARLGML*DLTLSY
Trigger: GTAGCTCAGTGTGAGATCCAAGAGCATGCCAAGCCT...GGCTGTGGCCACCGTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTGTGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263461.11
ENST00000497136.6
CDS TCA 90 bp ACTGTGGTGCGGGCAGTCCTGAAAGCAGTCCCGTCAGCAGGAACTTaGGGTGCACTTCCCGCAGAATTGAACCTCTGGGATGTTCTTCCC +
Preference number: 5 (lower is better)
Translates to: TVVRAVLKAVPSAGT*GALPAELNLWDVLP
Trigger: GGGAAGAACATCCCAGAGGTTCAATTCTGCGGGAAGTGCACCTCAAGTTCCTGCTGACGGGACTGCTTTCAGGACTGCCCGCACCACAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000604220.5
ENST00000604585.5
CDS TCA 90 bp CAACGGTGGACACATACGAATAGCAAACTGTGGTGCGGGCAGTCCTaGAAGCAGTCCCGTCAGCAGGAACTTGAGGTGCACTTCCCGCAG +
Preference number: 5 (lower is better)
Translates to: QRWTHTNSKLWCGQS*KQSRQQELEVHFPQ
Trigger: CTGCGGGAAGTGCACCTCAAGTTCCTGCTGACGGGACTGCTTTCAGGACTGCCCGCACCACAGTTTGCTATTCGTATGTGTCCACCGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000604220.5
ENST00000604585.5
CDS GCA 90 bp CCCTTTACTTGCTGGGACTGGGGGCCACATCTGACAGAAAGGGCCTaGCCTTTAAGGTCAGCTAAGACTTCTGCAGGGGCCACTTGCAGA +
Preference number: 5 (lower is better)
Translates to: PFTCWDWGPHLTERA*PLRSAKTSAGATCR
Trigger: TCTGCAAGTGGCCCCTGCAGAAGTCTTAGCTGACCTTAAAGGGCAGGCCCTTTCTGTCAGATGTGGCCCCCAGTCCCAGCAAGTAAAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000604509.5
CDS-3UTR CAA 90 bp TGCCTCTTTCACCACGAAAAGCAATGCTCCTACCTGTTGGAAGATCAACCAGTTTCCACCGCCGCCTTGTaGTGGGCGTTGAGGGCCCCC +
Preference number: 5 (lower is better)
Translates to: CLFHHEKQCSYLLEDQPVSTAAL*WALRAP
Trigger: GGGGGCCCTCAACGCCCACAACAAGGCGGCGGTGGA...AACTGGTTGATCTTCCAACAGGTAGGAGCATTGCTTTTCGTGGTGAAAGAGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605543.5
CDS-3UTR CAA 90 bp CAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACGGTGGCCACAGCCAGACCTTATTTAGAGCTTTCTaGGCACCTGTGGCTGTGGCC +
Preference number: 5 (lower is better)
Translates to: QDPVLLFILDCDGGHSQTLFRAF*APVAVA
Trigger: GGCCACAGCCACAGGTGCCAAGAAAGCTCTAAATAA...GGTCTGGCTGTGGCCACCGTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263461.11
ENST00000497136.6
CDS-3UTR CAA 90 bp TCACAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACGGTGGCCACAGCCAGCTCCTGTGCGTTCTATaGCAATCACACCCACCGTCT +
Preference number: 5 (lower is better)
Translates to: SQDPVLLFILDCDGGHSQLLCVL*QSHPPS
Trigger: AGACGGTGGGTGTGATTGCAATAGAACGCACAGGAG...CTGGCTGTGGCCACCGTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263461.11
ENST00000497136.6
CDS-3UTR CAA 90 bp TCACAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACGGTGGCCACAGCCAGGCGGCTGCATTCTCATaGACAGGACAGCACACCATA +
Preference number: 5 (lower is better)
Translates to: SQDPVLLFILDCDGGHSQAAAFS*TGQHTI
Trigger: TATGGTGTGCTGTCCTGTCAATGAGAATGCAGCCGC...CTGGCTGTGGCCACCGTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263461.11
ENST00000497136.6
CDS-3UTR CAA 90 bp CTACCCATACTTCCATCTGGTGGAATCCGAGCACTGTCTTTTACTGAGTTTCCTGCCTTGTTGTGGGCGTaGAGGGCCCCCGTGAGGGTG +
Preference number: 5 (lower is better)
Translates to: LPILPSGGIRALSFTEFPALLWA*RAPVRV
Trigger: CACCCTCACGGGGGCCCTCAACGCCCACAACAAGGC...AGGAAACTCAGTAAAAGACAGTGCTCGGATTCCACCAGATGGAAGTATGGGTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000605543.5
CDS-3UTR CAA 90 bp AGCTCACAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACGGTGGCCACAGCCTCTTCTTCCATAGTTaGGTGCCAGTGTCGGCATTC +
Preference number: 5 (lower is better)
Translates to: SSQDPVLLFILDCDGGHSLFFHS*VPVSAF
Trigger: GAATGCCGACACTGGCACCAAACTATGGAAGAAGAG...GCTGTGGCCACCGTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTGTGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263461.11
ENST00000497136.6
CDS-3UTR CAA 90 bp CCCTTGGAACAAGGAGATAGGGGCACCACACAGGCTCGGTTAACTCTTGTTCATCCCGTCAGCAGGAACTaGAGGTGCACTTCCCGCAGA +
Preference number: 5 (lower is better)
Translates to: PLEQGDRGTTQARLTLVHPVSRN*RCTSRR
Trigger: TCTGCGGGAAGTGCACCTCAAGTTCCTGCTGACGGG...ATGAACAAGAGTTAACCGAGCCTGTGTGGTGCCCCTATCTCCTTGTTCCAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497136.6
CDS-3UTR CAA 90 bp CAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACGGTGGCCACAGCCAGACCTGGATGCTTAACTCTTaGTGTAGCAGACCACTGGTG +
Preference number: 5 (lower is better)
Translates to: QDPVLLFILDCDGGHSQTWMLNS*CSRPLV
Trigger: CACCAGTGGTCTGCTACACAAAGAGTTAAGCATCCA...GGTCTGGCTGTGGCCACCGTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR CAA 90 bp AGCTCACAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACGGTGGCCACAGCCATCACCATAGAGCCTaGAAACAAGCAGGCACCTCT +
Preference number: 5 (lower is better)
Translates to: SSQDPVLLFILDCDGGHSHHHRA*KQAGTS
Trigger: AGAGGTGCCTGCTTGTTTCAAGGCTCTATGGTGATG...GCTGTGGCCACCGTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTGTGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR CAA 90 bp CAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACGGTGGCCACAGCCAGACCCATATATCCAGTGGGTaGCTCAGTTTGTCTCGAGGA +
Preference number: 5 (lower is better)
Translates to: QDPVLLFILDCDGGHSQTHISSG*LSLSRG
Trigger: TCCTCGAGACAAACTGAGCAACCCACTGGATATATG...GGTCTGGCTGTGGCCACCGTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR CAA 90 bp CAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACGGTGGCCACAGCCAGACCGCTGGTTATCTGCACTaGTTTCCAACAGCAACTGCA +
Preference number: 5 (lower is better)
Translates to: QDPVLLFILDCDGGHSQTAGYLH*FPTATA
Trigger: TGCAGTTGCTGTTGGAAACAAGTGCAGATAACCAGC...GGTCTGGCTGTGGCCACCGTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR CAA 90 bp CAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACGGTGGCCACAGCCAGACCACGCCCTCTGCCAATTaGCCATTGGCAATCATATTC +
Preference number: 5 (lower is better)
Translates to: QDPVLLFILDCDGGHSQTTPSAN*PLAIIF
Trigger: GAATATGATTGCCAATGGCAAATTGGCAGAGGGCGT...GGTCTGGCTGTGGCCACCGTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS GCA 90 bp GAGTTCCCATATCATGACCCTGCCATCACTCACTACGAGGGCGGCTaGATTCTCATTGACAGGACAGCACACCATACTGAAGGGACGGAC +
Preference number: 5 (lower is better)
Translates to: EFPYHDPAITHYEGG*ILIDRTAHHTEGTD
Trigger: GTCCGTCCCTTCAGTATGGTGTGCTGTCCTGTCAATGAGAATGCAGCCGCCCTCGTAGTGAGTGATGGCAGGGTCATGATATGGGAACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000604585.5
CDS-3UTR CAA 90 bp CAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACGGTGGCCACAGCCAGACCACGATGATCTTCCCATaGACATCAGCAGAAGCTAAC +
Preference number: 5 (lower is better)
Translates to: QDPVLLFILDCDGGHSQTTMIFP*TSAEAN
Trigger: GTTAGCTTCTGCTGATGTCAATGGGAAGATCATCGT...GGTCTGGCTGTGGCCACCGTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263461.11
ENST00000497136.6
CDS-3UTR CAA 90 bp CATGGCCTCTCGAGTTGCAAGTTGCTTCTTTCTCAGGCTCTTCAAGTTGTGAGAGGGCCTGAGGGAGGCTaGGATGGGGAGAAGTCTGAG +
Preference number: 5 (lower is better)
Translates to: HGLSSCKLLLSQALQVVRGPEGG*DGEKSE
Trigger: CTCAGACTTCTCCCCATCCAAGCCTCCCTCAGGCCC...TCTCACAACTTGAAGAGCCTGAGAAAGAAGCAACTTGCAACTCGAGAGGCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497136.6
CDS-3UTR CAA 90 bp CAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACGGTGGCCACAGCCAGACCCAATGCTCCTACCTGTaGGAAGATCAACCAGTTGAA +
Preference number: 5 (lower is better)
Translates to: QDPVLLFILDCDGGHSQTQCSYL*EDQPVE
Trigger: TTCAACTGGTTGATCTTCCAACAGGTAGGAGCATTG...GGTCTGGCTGTGGCCACCGTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR CAA 90 bp TCACAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACGGTGGCCACAGCCAGCATATATCCAGTGGGTaGCTCAGTTTGTCTCGAGGA +
Preference number: 5 (lower is better)
Translates to: SQDPVLLFILDCDGGHSQHISSG*LSLSRG
Trigger: TCCTCGAGACAAACTGAGCAACCCACTGGATATATG...CTGGCTGTGGCCACCGTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR CAA 90 bp GCTCACAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACGGTGGCCACAGCCTCTGCCAATTTGCCATaGGCAATCATATTCGTTGCC +
Preference number: 5 (lower is better)
Translates to: AHRTLYSSSSWTVTVATASANLP*AIIFVA
Trigger: GGCAACGAATATGATTGCCAATGGCAAATTGGCAGA...GGCTGTGGCCACCGTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTGTGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR CAA 90 bp GCTCACAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACGGTGGCCACAGCCACATGTGATTCCTTTTaGAAGGCAGGTATGCCAACT +
Preference number: 5 (lower is better)
Translates to: AHRTLYSSSSWTVTVATATCDSF*KAGMPT
Trigger: AGTTGGCATACCTGCCTTCAAAAAGGAATCACATGT...GGCTGTGGCCACCGTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTGTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263461.11
ENST00000497136.6
CDS-3UTR CAA 90 bp CAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACGGTGGCCACAGCCAGACCTCAAATGCTCCATACTaGAGGCAAGCTTCCACAAAT +
Preference number: 5 (lower is better)
Translates to: QDPVLLFILDCDGGHSQTSNAPY*RQASTN
Trigger: ATTTGTGGAAGCTTGCCTCAAGTATGGAGCATTTGA...GGTCTGGCTGTGGCCACCGTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS TCA 90 bp CTGGTAAGCACCTGGATAGGCTTGGCATGCTCTTGGATCTCACACTaGGCTACTCCTGCTGCTACATCCCAGACGATGATCTTCCCATTG +
Preference number: 5 (lower is better)
Translates to: LVSTWIGLACSWISH*ATPAATSQTMIFPL
Trigger: CAATGGGAAGATCATCGTCTGGGATGTAGCAGCAGGAGTAGCTCAGTGTGAGATCCAAGAGCATGCCAAGCCTATCCAGGTGCTTACCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605178.5
CDS CCA 90 bp GGACTGAGCTTTCTATCCCGAATGTTGAGGGCACCTATTGAAACTTaGAACCACCTACTTTTGCCAGCCATGCAGCCCGATTCCACTCGC +
Preference number: 5 (lower is better)
Translates to: GLSFLSRMLRAPIET*NHLLLPAMQPDSTR
Trigger: GCGAGTGGAATCGGGCTGCATGGCTGGCAAAAGTAGGTGGTTCCAAGTTTCAATAGGTGCCCTCAACATTCGGGATAGAAAGCTCAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603658.1
CDS CCA 90 bp TTTCTAACAGGTCTGATGATGGGAGAACCCTTTACTTGCTGGGACTaGGGGCCACATCTGACAGAAAGGGCCTGCCCTTTAAGGTCAGCT +
Preference number: 5 (lower is better)
Translates to: FLTGLMMGEPFTCWD*GPHLTERACPLRSA
Trigger: AGCTGACCTTAAAGGGCAGGCCCTTTCTGTCAGATGTGGCCCCCAGTCCCAGCAAGTAAAGGGTTCTCCCATCATCAGACCTGTTAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604509.5
CDS-3UTR CAA 90 bp CAGTGGTCAAACAGCTCACAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACGGACAGAACCATTACTaGTACCAACAGCCAGCAGTG +
Preference number: 5 (lower is better)
Translates to: QWSNSSQDPVLLFILDCDGQNHY*YQQPAV
Trigger: CACTGCTGGCTGTTGGTACAAGTAATGGTTCTGTCC...GTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTGTGAGCTGTTTGACCACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR CAA 90 bp GCTCACAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACGGTGGCCACAGCCATTGTAGGGAAGTTTTaGGACATCTCTCTAAGAAGG +
Preference number: 5 (lower is better)
Translates to: AHRTLYSSSSWTVTVATAIVGKF*DISLRR
Trigger: CCTTCTTAGAGAGATGTCCAAAAACTTCCCTACAAT...GGCTGTGGCCACCGTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTGTGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS GCA 90 bp GATAGGCTTGGCATGCTCTTGGATCTCACACTGAGCTACTCCTGCTaGTACATCCCAGACGATGATCTTCCCATTGACATCAGCAGAAGC +
Preference number: 5 (lower is better)
Translates to: DRLGMLLDLTLSYSC*YIPDDDLPIDISRS
Trigger: GCTTCTGCTGATGTCAATGGGAAGATCATCGTCTGGGATGTAGCAGCAGGAGTAGCTCAGTGTGAGATCCAAGAGCATGCCAAGCCTATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263461.11
ENST00000470052.5
ENST00000497136.6
ENST00000604585.5
ENST00000605069.5
ENST00000605178.5
ENST00000605202.5
CDS GCA 90 bp CTGGATAGGCTTGGCATGCTCTTGGATCTCACACTGAGCTACTCCTaGTGCTACATCCCAGACGATGATCTTCCCATTGACATCAGCAGA +
Preference number: 5 (lower is better)
Translates to: LDRLGMLLDLTLSYS*CYIPDDDLPIDISR
Trigger: TCTGCTGATGTCAATGGGAAGATCATCGTCTGGGATGTAGCAGCAGGAGTAGCTCAGTGTGAGATCCAAGAGCATGCCAAGCCTATCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263461.11
ENST00000470052.5
ENST00000497136.6
ENST00000604585.5
ENST00000605069.5
ENST00000605178.5
ENST00000605202.5
CDS CCA 90 bp TTTCCATTTCTAACAGGTCTGATGATGGGAGAACCCTTTACTTGCTaGGACTGGGGGCCACATCTGACAGAAAGGGCCTGCCCTTTAAGG +
Preference number: 5 (lower is better)
Translates to: FPFLTGLMMGEPFTC*DWGPHLTERACPLR
Trigger: CCTTAAAGGGCAGGCCCTTTCTGTCAGATGTGGCCCCCAGTCCCAGCAAGTAAAGGGTTCTCCCATCATCAGACCTGTTAGAAATGGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000604509.5
CDS-3UTR CAA 90 bp CAGTGGTCAAACAGCTCACAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACGTTCTTCCCCAGCAATaGCACTTTGCCCAATCATGT +
Preference number: 5 (lower is better)
Translates to: QWSNSSQDPVLLFILDCDVLPQQ*HFAQSC
Trigger: ACATGATTGGGCAAAGTGCAATTGCTGGGGAAGAAC...GTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTGTGAGCTGTTTGACCACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263461.11
CDS-3UTR CAA 90 bp TCACAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACGGTGGCCACAGCCAGTTGTATGATCATAAGTaGACCGTTTCACTTCCTGCA +
Preference number: 5 (lower is better)
Translates to: SQDPVLLFILDCDGGHSQLYDHK*TVSLPA
Trigger: TGCAGGAAGTGAAACGGTCAACTTATGATCATACAA...CTGGCTGTGGCCACCGTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR CAA 90 bp GGTCTGGCGGGCCATGGCCTCTCGAGTTGCAAGTTGCTTCTTTCTCAGGCTCTTTCAAATGCTCCATACTaGAGGCAAGCTTCCACAAAT +
Preference number: 5 (lower is better)
Translates to: GLAGHGLSSCKLLLSQALSNAPY*RQASTN
Trigger: ATTTGTGGAAGCTTGCCTCAAGTATGGAGCATTTGA...AAGAGCCTGAGAAAGAAGCAACTTGCAACTCGAGAGGCCATGGCCCGCCAGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS TCA 90 bp ACACAGGGCCAGTACCATTCTGCTGGCAAATTAGGAACTTGGGGATaGGAGTCAGTGGACAGGTCACTTCCAATGAGACTAGAGCAGCAA +
Preference number: 5 (lower is better)
Translates to: TQGQYHSAGKLGTWG*ESVDRSLPMRLEQQ
Trigger: TTGCTGCTCTAGTCTCATTGGAAGTGACCTGTCCACTGACTCTCATCCCCAAGTTCCTAATTTGCCAGCAGAATGGTACTGGCCCTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604509.5
CDS GCA 90 bp AGCATTTTATCCCTGGGATCACTAGACACAGGGCCAGTACCATTCTaGTGGCAAATTAGGAACTTGGGGATGAGAGTCAGTGGACAGGTC +
Preference number: 5 (lower is better)
Translates to: SILSLGSLDTGPVPF*WQIRNLGMRVSGQV
Trigger: GACCTGTCCACTGACTCTCATCCCCAAGTTCCTAATTTGCCAGCAGAATGGTACTGGCCCTGTGTCTAGTGATCCCAGGGATAAAATGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604509.5
CDS GCA 90 bp TTTCGATGGCAGATTCATCATTGCCTCTTTCACCACGAAAAGCAATaGTCCTACCTTAGCATCCCGAGTAGCTGGGATTACAGGCGCTCG +
Preference number: 5 (lower is better)
Translates to: FRWQIHHCLFHHEKQ*SYLSIPSSWDYRRS
Trigger: CGAGCGCCTGTAATCCCAGCTACTCGGGATGCTAAGGTAGGAGCATTGCTTTTCGTGGTGAAAGAGGCAATGATGAATCTGCCATCGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604509.5
CDS GCA 90 bp CTATTTCCATTTCTAACAGGTCTGATGATGGGAGAACCCTTTACTTaGTGGGACTGGGGGCCACATCTGACAGAAAGGGCCTGCCCTTTA +
Preference number: 5 (lower is better)
Translates to: LFPFLTGLMMGEPFT*WDWGPHLTERACPL
Trigger: TAAAGGGCAGGCCCTTTCTGTCAGATGTGGCCCCCAGTCCCAGCAAGTAAAGGGTTCTCCCATCATCAGACCTGTTAGAAATGGAAATAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000604509.5
CDS-3UTR CAA 90 bp ACAAAACTTAGCAACTGCTTAAACCAAGGAATTAACGGTTCTGTGTTTTCAAGGGCCTTGTTGTGGGCGTaGAGGGCCCCCGTGAGGGTG +
Preference number: 5 (lower is better)
Translates to: TKLSNCLNQGINGSVFSRALLWA*RAPVRV
Trigger: CACCCTCACGGGGGCCCTCAACGCCCACAACAAGGC...CCTTGAAAACACAGAACCGTTAATTCCTTGGTTTAAGCAGTTGCTAAGTTTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263461.11
CDS-3UTR CAA 90 bp AGTCTTAGAACAGTGGTCAAACAGCTCACAGGACCCTGTACTCCTCTTCATCCTAGGCTTGGCATGCTCTaGGATCTCACACTGAGCTAC +
Preference number: 5 (lower is better)
Translates to: SLRTVVKQLTGPCTPLHPRLGML*DLTLSY
Trigger: GTAGCTCAGTGTGAGATCCAAGAGCATGCCAAGCCT...AGGATGAAGAGGAGTACAGGGTCCTGTGAGCTGTTTGACCACTGTTCTAAGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263461.11
ENST00000497136.6
CDS-3UTR CAA 90 bp GCCTTAAAACATCGGCACACTCCTCAGGATTCAAACGGACTTTTGCCAGCCATGGCACTTCCCGCAGAATaGAACCTCTGGGATGTTCTT +
Preference number: 5 (lower is better)
Translates to: ALKHRHTPQDSNGLLPAMALPAE*NLWDVL
Trigger: AAGAACATCCCAGAGGTTCAATTCTGCGGGAAGTGC...CATGGCTGGCAAAAGTCCGTTTGAATCCTGAGGAGTGTGCCGATGTTTTAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497136.6
CDS-3UTR CAA 90 bp AGTCTTAGAACAGTGGTCAAACAGCTCACAGGACCCTGTACTCCTCTTCATCCTAGTGGGTTGCTCAGTTaGTCTCGAGGAGCAGCTTCT +
Preference number: 5 (lower is better)
Translates to: SLRTVVKQLTGPCTPLHPSGLLS*SRGAAS
Trigger: AGAAGCTGCTCCTCGAGACAAACTGAGCAACCCACT...AGGATGAAGAGGAGTACAGGGTCCTGTGAGCTGTTTGACCACTGTTCTAAGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR CAA 90 bp CAGTGGTCAAACAGCTCACAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACTCATTCAATAAGTCTTaGCCAGCTGCTCCGGCTTTT +
Preference number: 5 (lower is better)
Translates to: QWSNSSQDPVLLFILDCDSFNKS*PAAPAF
Trigger: AAAAGCCGGAGCAGCTGGCAAAGACTTATTGAATGA...GTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTGTGAGCTGTTTGACCACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS TCA 90 bp AAGTTCAGGACTGAGCTTTCTATCCCGAATGTTGAGGGCACCTATTaGAACTTGGAACCACCTACTTTTGCCAGCCATGCAGCCCGATTC +
Preference number: 5 (lower is better)
Translates to: KFRTELSIPNVEGTY*NLEPPTFASHAARF
Trigger: GAATCGGGCTGCATGGCTGGCAAAAGTAGGTGGTTCCAAGTTTCAATAGGTGCCCTCAACATTCGGGATAGAAAGCTCAGTCCTGAACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603658.1
CDS CCA 90 bp GAGTCAGTGGACAGGTCACTTCCAATGAGACTAGAGCAGCAACACTaGACTAAAGACGGGAATGATTCCTGGAAGTTCAGCAACATACCC +
Preference number: 5 (lower is better)
Translates to: ESVDRSLPMRLEQQH*TKDGNDSWKFSNIP
Trigger: GGGTATGTTGCTGAACTTCCAGGAATCATTCCCGTCTTTAGTCCAGTGTTGCTGCTCTAGTCTCATTGGAAGTGACCTGTCCACTGACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604509.5
CDS CCA 90 bp ATTTTATCCCTGGGATCACTAGACACAGGGCCAGTACCATTCTGCTaGCAAATTAGGAACTTGGGGATGAGAGTCAGTGGACAGGTCACT +
Preference number: 5 (lower is better)
Translates to: ILSLGSLDTGPVPFC*QIRNLGMRVSGQVT
Trigger: AGTGACCTGTCCACTGACTCTCATCCCCAAGTTCCTAATTTGCCAGCAGAATGGTACTGGCCCTGTGTCTAGTGATCCCAGGGATAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604509.5
CDS-3UTR CAA 90 bp AGTCTTAGAACAGTGGTCAAACAGCTCACAGGACCCTGTACTCCTCTTCATCCTACATCCTGGATAGGCTaGGCATGCTCTTGGATCTCA +
Preference number: 5 (lower is better)
Translates to: SLRTVVKQLTGPCTPLHPTSWIG*ACSWIS
Trigger: TGAGATCCAAGAGCATGCCAAGCCTATCCAGGATGT...AGGATGAAGAGGAGTACAGGGTCCTGTGAGCTGTTTGACCACTGTTCTAAGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263461.11
ENST00000497136.6
CDS-3UTR CAA 90 bp CATGGCCTCTCGAGTTGCAAGTTGCTTCTTTCTCAGGCTCTTCAAGTTGTGAGAACATCCTGGATAGGCTaGGCATGCTCTTGGATCTCA +
Preference number: 5 (lower is better)
Translates to: HGLSSCKLLLSQALQVVRTSWIG*ACSWIS
Trigger: TGAGATCCAAGAGCATGCCAAGCCTATCCAGGATGT...TCTCACAACTTGAAGAGCCTGAGAAAGAAGCAACTTGCAACTCGAGAGGCCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497136.6
CDS-3UTR CAA 90 bp TTACCAGGAGCAAAACGAATCTTCCTCACCCAACTTCGGTGTGTGGGTATTCCTATCGCGGGAAGCATCTaGATTCCACAACCACTGAAC +
Preference number: 5 (lower is better)
Translates to: LPGAKRIFLTQLRCVGIPIAGSI*IPQPLN
Trigger: GTTCAGTGGTTGTGGAATCAAGATGCTTCCCGCGAT...AGGAATACCCACACACCGAAGTTGGGTGAGGAAGATTCGTTTTGCTCCTGGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497136.6
CDS-3UTR CAA 90 bp AGTCTTAGAACAGTGGTCAAACAGCTCACAGGACCCTGTACTCCTCTTCATCCTGGACAGAACCATTACTaGTACCAACAGCCAGCAGTG +
Preference number: 5 (lower is better)
Translates to: SLRTVVKQLTGPCTPLHPGQNHY*YQQPAV
Trigger: CACTGCTGGCTGTTGGTACAAGTAATGGTTCTGTCC...AGGATGAAGAGGAGTACAGGGTCCTGTGAGCTGTTTGACCACTGTTCTAAGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR CAA 90 bp TCAACCCACCGCCTTAAAACATCGGCACACTCCTCAGGATTCAAACGGACTTTTCATCACCATAGAGCCTaGAAACAAGCAGGCACCTCT +
Preference number: 5 (lower is better)
Translates to: STHRLKTSAHSSGFKRTFHHHRA*KQAGTS
Trigger: AGAGGTGCCTGCTTGTTTCAAGGCTCTATGGTGATG...AAAAGTCCGTTTGAATCCTGAGGAGTGTGCCGATGTTTTAAGGCGGTGGGTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR CAA 90 bp GCCTTAAAACATCGGCACACTCCTCAGGATTCAAACGGACTTTTGCCAGCCATGCATATATCCAGTGGGTaGCTCAGTTTGTCTCGAGGA +
Preference number: 5 (lower is better)
Translates to: ALKHRHTPQDSNGLLPAMHISSG*LSLSRG
Trigger: TCCTCGAGACAAACTGAGCAACCCACTGGATATATG...CATGGCTGGCAAAAGTCCGTTTGAATCCTGAGGAGTGTGCCGATGTTTTAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR CAA 90 bp GCCTTAAAACATCGGCACACTCCTCAGGATTCAAACGGACTTTTGCCAGCCATGACGCCCTCTGCCAATTaGCCATTGGCAATCATATTC +
Preference number: 5 (lower is better)
Translates to: ALKHRHTPQDSNGLLPAMTPSAN*PLAIIF
Trigger: GAATATGATTGCCAATGGCAAATTGGCAGAGGGCGT...CATGGCTGGCAAAAGTCCGTTTGAATCCTGAGGAGTGTGCCGATGTTTTAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS GCA 90 bp TACTCACTATTATTATACCCCAAACAGCCCATGTCCTGTCCTGACTaGACTAGTCTGCTGCCCTCCTTAGAAGCCCAGGCTATAAAAGTC +
Preference number: 5 (lower is better)
Translates to: YSLLLYPKQPMSCPD*TSLLPSLEAQAIKV
Trigger: GACTTTTATAGCCTGGGCTTCTAAGGAGGGCAGCAGACTAGTGCAGTCAGGACAGGACATGGGCTGTTTGGGGTATAATAATAGTGAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604509.5
CDS CCA 90 bp CATGAGTGGATGCTTAACTCTTTGTGTAGCAGACCACTGGTGAGATaGTACACCAGGACAGAACCATTACTTGTACCAACAGCCAGCAGT +
Preference number: 5 (lower is better)
Translates to: HEWMLNSLCSRPLVR*YTRTEPLLVPTASS
Trigger: ACTGCTGGCTGTTGGTACAAGTAATGGTTCTGTCCTGGTGTACCATCTCACCAGTGGTCTGCTACACAAAGAGTTAAGCATCCACTCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000604220.5
ENST00000604585.5
ENST00000605543.5
CDS-3UTR CAA 90 bp AAACTTACTCTCAACATAGATGCTTATGTGCTTTTGGGCACACATAGTCTTAGAGGGCCTGAGGGAGGCTaGGATGGGGAGAAGTCTGAG +
Preference number: 5 (lower is better)
Translates to: KLTLNIDAYVLLGTHSLRGPEGG*DGEKSE
Trigger: CTCAGACTTCTCCCCATCCAAGCCTCCCTCAGGCCC...TCTAAGACTATGTGTGCCCAAAAGCACATAAGCATCTATGTTGAGAGTAAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263461.11
ENST00000497136.6
CDS-3UTR CAA 90 bp CTACCCATACTTCCATCTGGTGGAATCCGAGCACTGTCTTTTACTGAGTTTCCTGGACAGAACCATTACTaGTACCAACAGCCAGCAGTG +
Preference number: 5 (lower is better)
Translates to: LPILPSGGIRALSFTEFPGQNHY*YQQPAV
Trigger: CACTGCTGGCTGTTGGTACAAGTAATGGTTCTGTCC...AGGAAACTCAGTAAAAGACAGTGCTCGGATTCCACCAGATGGAAGTATGGGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR CAA 90 bp GCCTTAAAACATCGGCACACTCCTCAGGATTCAAACGGACTTTTGCCAGCCATGGTCCATTCAATACCCTaGACTTCACATGAGTGGATG +
Preference number: 5 (lower is better)
Translates to: ALKHRHTPQDSNGLLPAMVHSIP*TSHEWM
Trigger: CATCCACTCATGTGAAGTCAAGGGTATTGAATGGAC...CATGGCTGGCAAAAGTCCGTTTGAATCCTGAGGAGTGTGCCGATGTTTTAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR CAA 90 bp CCCTTGGAACAAGGAGATAGGGGCACCACACAGGCTCGGTTAACTCTTGTTCATATGGCAGATTCATCATaGCCTCTTTCACCACGAAAA +
Preference number: 5 (lower is better)
Translates to: PLEQGDRGTTQARLTLVHMADSS*PLSPRK
Trigger: TTTTCGTGGTGAAAGAGGCAATGATGAATCTGCCAT...ATGAACAAGAGTTAACCGAGCCTGTGTGGTGCCCCTATCTCCTTGTTCCAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR CAA 90 bp CAGTGGTCAAACAGCTCACAGGACCCTGTACTCCTCTTCATCCTGGACTGTGACAGTGAGATGATACACTaGGCCATCAATATCGGTAAA +
Preference number: 5 (lower is better)
Translates to: QWSNSSQDPVLLFILDCDSEMIH*AINIGK
Trigger: TTTACCGATATTGATGGCCAAGTGTATCATCTCACT...GTCACAGTCCAGGATGAAGAGGAGTACAGGGTCCTGTGAGCTGTTTGACCACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR CAA 90 bp TTACCAGGAGCAAAACGAATCTTCCTCACCCAACTTCGGTGTGTGGGTATTCCTGCTGGTTATCTGCACTaGTTTCCAACAGCAACTGCA +
Preference number: 5 (lower is better)
Translates to: LPGAKRIFLTQLRCVGIPAGYLH*FPTATA
Trigger: TGCAGTTGCTGTTGGAAACAAGTGCAGATAACCAGC...AGGAATACCCACACACCGAAGTTGGGTGAGGAAGATTCGTTTTGCTCCTGGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR CAA 90 bp CTTTCTGCCTCCTGCAGCAAGCTGATCACAGATGATTCAACAATACTCAGCTCTTCAATGGGTTCTTCCTaGGGGGACTCAAGCTCATTC +
Preference number: 5 (lower is better)
Translates to: LSASCSKLITDDSTILSSSMGSS*GDSSSF
Trigger: GAATGAGCTTGAGTCCCCCAAGGAAGAACCCATTGA...AGAGCTGAGTATTGTTGAATCATCTGTGATCAGCTTGCTGCAGGAGGCAGAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR CAA 90 bp TGCCTCTTTCACCACGAAAAGCAATGCTCCTACCTGTTGGAAGATCAACCAGTTCCCGTCAGCAGGAACTaGAAGAGTTTGGGCAGTAAT +
Preference number: 5 (lower is better)
Translates to: CLFHHEKQCSYLLEDQPVPVSRN*KSLGSN
Trigger: ATTACTGCCCAAACTCTTCAAGTTCCTGCTGACGGG...AACTGGTTGATCTTCCAACAGGTAGGAGCATTGCTTTTCGTGGTGAAAGAGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605543.5
CDS TCA 90 bp CTTCACATGAGTGGATGCTTAACTCTTTGTGTAGCAGACCACTGGTaGGATGGTACACCAGGACAGAACCATTACTTGTACCAACAGCCA +
Preference number: 5 (lower is better)
Translates to: LHMSGCLTLCVADHW*DGTPGQNHYLYQQP
Trigger: TGGCTGTTGGTACAAGTAATGGTTCTGTCCTGGTGTACCATCTCACCAGTGGTCTGCTACACAAAGAGTTAAGCATCCACTCATGTGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000604220.5
ENST00000604585.5
ENST00000605543.5
CDS-3UTR CAA 90 bp ACCTCACCTATCGGACTAAACATAAATCTTAAAACCTCCTATGGTCCTCTGAGCCTCCTGTGCGTTCTATaGCAATCACACCCACCGTCT +
Preference number: 5 (lower is better)
Translates to: TSPIGLNINLKTSYGPLSLLCVL*QSHPPS
Trigger: AGACGGTGGGTGTGATTGCAATAGAACGCACAGGAG...GCTCAGAGGACCATAGGAGGTTTTAAGATTTATGTTTAGTCCGATAGGTGAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263461.11
ENST00000497136.6
CDS-3UTR CAA 90 bp CTGCTTAAAACCGAGGTTCTTCAAACTCCGGGCATAATCTGCATATATAGCAGTGCGGCTGCATTCTCATaGACAGGACAGCACACCATA +
Preference number: 5 (lower is better)
Translates to: LLKTEVLQTPGIICIYSSAAAFS*TGQHTI
Trigger: TATGGTGTGCTGTCCTGTCAATGAGAATGCAGCCGC...ACTGCTATATATGCAGATTATGCCCGGAGTTTGAAGAACCTCGGTTTTAAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497136.6
CDS-3UTR CAA 90 bp GCCTTAAAACATCGGCACACTCCTCAGGATTCAAACGGACTTTTGCCAGCCATGCTCACTAATCCCATATaGTTTGGTGTTGAGGTAGCA +
Preference number: 5 (lower is better)
Translates to: ALKHRHTPQDSNGLLPAMLTNPI*FGVEVA
Trigger: TGCTACCTCAACACCAAACAATATGGGATTAGTGAG...CATGGCTGGCAAAAGTCCGTTTGAATCCTGAGGAGTGTGCCGATGTTTTAAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR CAA 90 bp TGGGCACACATAGTCTTAGAACAGTGGTCAAACAGCTCACAGGACCCTGTACTCATGGCAGATTCATCATaGCCTCTTTCACCACGAAAA +
Preference number: 5 (lower is better)
Translates to: WAHIVLEQWSNSSQDPVLMADSS*PLSPRK
Trigger: TTTTCGTGGTGAAAGAGGCAATGATGAATCTGCCAT...GAGTACAGGGTCCTGTGAGCTGTTTGACCACTGTTCTAAGACTATGTGTGCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR CAA 90 bp CCCTTGGAACAAGGAGATAGGGGCACCACACAGGCTCGGTTAACTCTTGTTCATGGTCTGTACATTTCCTaGTATGATCATAAGTTGACC +
Preference number: 5 (lower is better)
Translates to: PLEQGDRGTTQARLTLVHGLYIS*YDHKLT
Trigger: GGTCAACTTATGATCATACAAGGAAATGTACAGACC...ATGAACAAGAGTTAACCGAGCCTGTGTGGTGCCCCTATCTCCTTGTTCCAAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR CAA 90 bp ATGCTTATGTGCTTTTGGGCACACATAGTCTTAGAACAGTGGTCAAACAGCTCAGATTCAAACGGACTTTaGCCAGCCATGCAGCCCGAT +
Preference number: 5 (lower is better)
Translates to: MLMCFWAHIVLEQWSNSSDSNGL*PAMQPD
Trigger: ATCGGGCTGCATGGCTGGCAAAAGTCCGTTTGAATC...TGAGCTGTTTGACCACTGTTCTAAGACTATGTGTGCCCAAAAGCACATAAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR CAA 90 bp AGTCTTAGAACAGTGGTCAAACAGCTCACAGGACCCTGTACTCCTCTTCATCCTTCATTCAATAAGTCTTaGCCAGCTGCTCCGGCTTTT +
Preference number: 5 (lower is better)
Translates to: SLRTVVKQLTGPCTPLHPSFNKS*PAAPAF
Trigger: AAAAGCCGGAGCAGCTGGCAAAGACTTATTGAATGA...AGGATGAAGAGGAGTACAGGGTCCTGTGAGCTGTTTGACCACTGTTCTAAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR CAA 90 bp TCAACCCACCGCCTTAAAACATCGGCACACTCCTCAGGATTCAAACGGACTTTTTCATTCAATAAGTCTTaGCCAGCTGCTCCGGCTTTT +
Preference number: 5 (lower is better)
Translates to: STHRLKTSAHSSGFKRTFSFNKS*PAAPAF
Trigger: AAAAGCCGGAGCAGCTGGCAAAGACTTATTGAATGA...AAAAGTCCGTTTGAATCCTGAGGAGTGTGCCGATGTTTTAAGGCGGTGGGTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR CAA 90 bp TGCCTCTTTCACCACGAAAAGCAATGCTCCTACCTGTTGGAAGATCAACCAGTTACGATGATCTTCCCATaGACATCAGCAGAAGCTAAC +
Preference number: 5 (lower is better)
Translates to: CLFHHEKQCSYLLEDQPVTMIFP*TSAEAN
Trigger: GTTAGCTTCTGCTGATGTCAATGGGAAGATCATCGT...AACTGGTTGATCTTCCAACAGGTAGGAGCATTGCTTTTCGTGGTGAAAGAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497136.6
CDS-3UTR CAA 90 bp TTACCAGGAGCAAAACGAATCTTCCTCACCCAACTTCGGTGTGTGGGTATTCCTACATGTGATTCCTTTTaGAAGGCAGGTATGCCAACT +
Preference number: 5 (lower is better)
Translates to: LPGAKRIFLTQLRCVGIPTCDSF*KAGMPT
Trigger: AGTTGGCATACCTGCCTTCAAAAAGGAATCACATGT...AGGAATACCCACACACCGAAGTTGGGTGAGGAAGATTCGTTTTGCTCCTGGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497136.6
CDS-3UTR CAA 90 bp CTGCTTAAAACCGAGGTTCTTCAAACTCCGGGCATAATCTGCATATATAGCAGTCATCACCATAGAGCCTaGAAACAAGCAGGCACCTCT +
Preference number: 5 (lower is better)
Translates to: LLKTEVLQTPGIICIYSSHHHRA*KQAGTS
Trigger: AGAGGTGCCTGCTTGTTTCAAGGCTCTATGGTGATG...ACTGCTATATATGCAGATTATGCCCGGAGTTTGAAGAACCTCGGTTTTAAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR CAA 90 bp AACTCTTGTTCATCCATTCTAAAGCACGCAGACTTCATAGACATCTCTAGGACTAGTGGGTTGCTCAGTTaGTCTCGAGGAGCAGCTTCT +
Preference number: 5 (lower is better)
Translates to: NSCSSILKHADFIDISRTSGLLS*SRGAAS
Trigger: AGAAGCTGCTCCTCGAGACAAACTGAGCAACCCACT...AGTCCTAGAGATGTCTATGAAGTCTGCGTGCTTTAGAATGGATGAACAAGAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR CAA 90 bp TGGGCACACATAGTCTTAGAACAGTGGTCAAACAGCTCACAGGACCCTGTACTCGGTCTGTACATTTCCTaGTATGATCATAAGTTGACC +
Preference number: 5 (lower is better)
Translates to: WAHIVLEQWSNSSQDPVLGLYIS*YDHKLT
Trigger: GGTCAACTTATGATCATACAAGGAAATGTACAGACC...GAGTACAGGGTCCTGTGAGCTGTTTGACCACTGTTCTAAGACTATGTGTGCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR CAA 90 bp GTAGGCATTTTCACAGAGCACGTCATAGCATATATCCAGTGGGTTGCTCAGTTTGCTGGTTATCTGCACTaGTTTCCAACAGCAACTGCA +
Preference number: 5 (lower is better)
Translates to: VGIFTEHVIAYIQWVAQFAGYLH*FPTATA
Trigger: TGCAGTTGCTGTTGGAAACAAGTGCAGATAACCAGC...AAACTGAGCAACCCACTGGATATATGCTATGACGTGCTCTGTGAAAATGCCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR CAA 90 bp CTTCAATGGGTTCTTCCTTGGGGGACTCAAGCTCATTCAATAAGTCTTTGCCAGTCTGCCAATTTGCCATaGGCAATCATATTCGTTGCC +
Preference number: 5 (lower is better)
Translates to: LQWVLPWGTQAHSISLCQSANLP*AIIFVA
Trigger: GGCAACGAATATGATTGCCAATGGCAAATTGGCAGA...CTGGCAAAGACTTATTGAATGAGCTTGAGTCCCCCAAGGAAGAACCCATTGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR CAA 90 bp GTAGGCATTTTCACAGAGCACGTCATAGCATATATCCAGTGGGTTGCTCAGTTTACGCCCTCTGCCAATTaGCCATTGGCAATCATATTC +
Preference number: 5 (lower is better)
Translates to: VGIFTEHVIAYIQWVAQFTPSAN*PLAIIF
Trigger: GAATATGATTGCCAATGGCAAATTGGCAGAGGGCGT...AAACTGAGCAACCCACTGGATATATGCTATGACGTGCTCTGTGAAAATGCCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR CAA 90 bp ACCTCACCTATCGGACTAAACATAAATCTTAAAACCTCCTATGGTCCTCTGAGCTCAATGGGTTCTTCCTaGGGGGACTCAAGCTCATTC +
Preference number: 5 (lower is better)
Translates to: TSPIGLNINLKTSYGPLSSMGSS*GDSSSF
Trigger: GAATGAGCTTGAGTCCCCCAAGGAAGAACCCATTGA...GCTCAGAGGACCATAGGAGGTTTTAAGATTTATGTTTAGTCCGATAGGTGAGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263461.11
ENST00000497136.6
CDS-3UTR CAA 90 bp AACTCTTGTTCATCCATTCTAAAGCACGCAGACTTCATAGACATCTCTAGGACTGTTCTTCCCCAGCAATaGCACTTTGCCCTGTTCCGT +
Preference number: 5 (lower is better)
Translates to: NSCSSILKHADFIDISRTVLPQQ*HFALFR
Trigger: ACGGAACAGGGCAAAGTGCAATTGCTGGGGAAGAAC...AGTCCTAGAGATGTCTATGAAGTCTGCGTGCTTTAGAATGGATGAACAAGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497136.6
CDS-3UTR CAA 90 bp AACTCTTGTTCATCCATTCTAAAGCACGCAGACTTCATAGACATCTCTAGGACTTTATTTAGAGCTTTCTaGGCACCTGTGGCTGTGGCC +
Preference number: 5 (lower is better)
Translates to: NSCSSILKHADFIDISRTLFRAF*APVAVA
Trigger: GGCCACAGCCACAGGTGCCAAGAAAGCTCTAAATAA...AGTCCTAGAGATGTCTATGAAGTCTGCGTGCTTTAGAATGGATGAACAAGAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497136.6
CDS-3UTR CAA 90 bp ACCTCACCTATCGGACTAAACATAAATCTTAAAACCTCCTATGGTCCTCTGAGCTGGATGCTTAACTCTTaGTGTAGCAGACCACTGGTG +
Preference number: 5 (lower is better)
Translates to: TSPIGLNINLKTSYGPLSWMLNS*CSRPLV
Trigger: CACCAGTGGTCTGCTACACAAAGAGTTAAGCATCCA...GCTCAGAGGACCATAGGAGGTTTTAAGATTTATGTTTAGTCCGATAGGTGAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263461.11
ENST00000497136.6
CDS-3UTR CAA 90 bp CTAAGTTCAGATTTACTTTCTGCCTCCTGCAGCAAGCTGATCACAGATGATTCATGGATGCTTAACTCTTaGTGTAGCAGACCACTGGTG +
Preference number: 5 (lower is better)
Translates to: LSSDLLSASCSKLITDDSWMLNS*CSRPLV
Trigger: CACCAGTGGTCTGCTACACAAAGAGTTAAGCATCCA...TGAATCATCTGTGATCAGCTTGCTGCAGGAGGCAGAAAGTAAATCTGAACTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR CAA 90 bp ATTAGTGATGGTTGTTCCTCTTCCAGATTTTCAGACGGGATGTCTCCACCTCACCTCACTAATCCCATATaGTTTGGTGTTGAGGTAGCA +
Preference number: 5 (lower is better)
Translates to: ISDGCSSSRFSDGMSPPHLTNPI*FGVEVA
Trigger: TGCTACCTCAACACCAAACAATATGGGATTAGTGAG...GTGAGGTGGAGACATCCCGTCTGAAAATCTGGAAGAGGAACAACCATCACTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497136.6
CDS-3UTR CAA 90 bp TTGACTTCACATGAGTGGATGCTTAACTCTTTGTGTAGCAGACCACTGGTGAGACAATGCTCCTACCTGTaGGAAGATCAACCAGTTGAA +
Preference number: 5 (lower is better)
Translates to: LTSHEWMLNSLCSRPLVRQCSYL*EDQPVE
Trigger: TTCAACTGGTTGATCTTCCAACAGGTAGGAGCATTG...TCTCACCAGTGGTCTGCTACACAAAGAGTTAAGCATCCACTCATGTGAAGTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR CAA 90 bp ATGCTTATGTGCTTTTGGGCACACATAGTCTTAGAACAGTGGTCAAACAGCTCACTCTCGAGTTGCAAGTaGCTTCTTTCTCAGGCTCTT +
Preference number: 5 (lower is better)
Translates to: MLMCFWAHIVLEQWSNSSLSSCK*LLSQAL
Trigger: AAGAGCCTGAGAAAGAAGCAACTTGCAACTCGAGAG...TGAGCTGTTTGACCACTGTTCTAAGACTATGTGTGCCCAAAAGCACATAAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR CAA 90 bp AAAACCGAGGTTCTTCAAACTCCGGGCATAATCTGCATATATAGCAGTGATGAGCTCTCGAGTTGCAAGTaGCTTCTTTCTCAGGCTCTT +
Preference number: 5 (lower is better)
Translates to: KTEVLQTPGIICIYSSDELSSCK*LLSQAL
Trigger: AAGAGCCTGAGAAAGAAGCAACTTGCAACTCGAGAG...CTCATCACTGCTATATATGCAGATTATGCCCGGAGTTTGAAGAACCTCGGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR CAA 90 bp TCTCTGAAGACTTTTAAATTCCCTTTTACTAGGTGCCTGTTAAGTCTGATCAGCAGTGGGTTGCTCAGTTaGTCTCGAGGAGCAGCTTCT +
Preference number: 5 (lower is better)
Translates to: SLKTFKFPFTRCLLSLISSGLLS*SRGAAS
Trigger: AGAAGCTGCTCCTCGAGACAAACTGAGCAACCCACT...GCTGATCAGACTTAACAGGCACCTAGTAAAAGGGAATTTAAAAGTCTTCAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497136.6
CDS-3UTR CAA 90 bp TTACCAGGAGCAAAACGAATCTTCCTCACCCAACTTCGGTGTGTGGGTATTCCTTTGTATGATCATAAGTaGACCGTTTCACTTCCTGCA +
Preference number: 5 (lower is better)
Translates to: LPGAKRIFLTQLRCVGIPLYDHK*TVSLPA
Trigger: TGCAGGAAGTGAAACGGTCAACTTATGATCATACAA...AGGAATACCCACACACCGAAGTTGGGTGAGGAAGATTCGTTTTGCTCCTGGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR CAA 90 bp CCTATCGGACTAAACATAAATCTTAAAACCTCCTATGGTCCTCTGAGCCTAAAAGATTCAAACGGACTTTaGCCAGCCATGCAGCCCGAT +
Preference number: 5 (lower is better)
Translates to: PIGLNINLKTSYGPLSLKDSNGL*PAMQPD
Trigger: ATCGGGCTGCATGGCTGGCAAAAGTCCGTTTGAATC...TTTTAGGCTCAGAGGACCATAGGAGGTTTTAAGATTTATGTTTAGTCCGATAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263461.11
ENST00000497136.6
CDS-3UTR CAA 90 bp CATGGCCTCTCGAGTTGCAAGTTGCTTCTTTCTCAGGCTCTTCAAGTTGTGAGAAGGAACTTGAAGAGTTaGGGCAGTAATGGAATCAAT +
Preference number: 5 (lower is better)
Translates to: HGLSSCKLLLSQALQVVRRNLKS*GSNGIN
Trigger: ATTGATTCCATTACTGCCCAAACTCTTCAAGTTCCT...TCTCACAACTTGAAGAGCCTGAGAAAGAAGCAACTTGCAACTCGAGAGGCCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605543.5
CDS TCA 90 bp CCAATGTTGCTCAAGTGCCATTTAGAAGAAATAAAATGTTCTGGCTaGTGGGTGGATTATAGTGGCTGGCCTGAGCAACACCTCTCTTTA +
Preference number: 5 (lower is better)
Translates to: PMLLKCHLEEIKCSG*WVDYSGWPEQHLSL
Trigger: TAAAGAGAGGTGTTGCTCAGGCCAGCCACTATAATCCACCCATCAGCCAGAACATTTTATTTCTTCTAAATGGCACTTGAGCAACATTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604714.1
CDS GCA 90 bp AAAAAGAAAGAATGTTATCTGCATAGCTCTTCTTCCATAGTTTGGTaGCAGTGTCGGCATTCCAGAGCACAATGTAATTTGGCGGGTGGA +
Preference number: 5 (lower is better)
Translates to: KKKECYLHSSSSIVW*QCRHSRAQCNLAGG
Trigger: TCCACCCGCCAAATTACATTGTGCTCTGGAATGCCGACACTGGCACCAAACTATGGAAGAAGAGCTATGCAGATAACATTCTTTCTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000604585.5
ENST00000605069.5
ENST00000605202.5
CDS-3UTR CAA 90 bp CTTTCTGCCTCCTGCAGCAAGCTGATCACAGATGATTCAACAATACTCAGCTCTATTGTAGGGAAGTTTTaGGACATCTCTCTAAGAAGG +
Preference number: 5 (lower is better)
Translates to: LSASCSKLITDDSTILSSIVGKF*DISLRR
Trigger: CCTTCTTAGAGAGATGTCCAAAAACTTCCCTACAAT...AGAGCTGAGTATTGTTGAATCATCTGTGATCAGCTTGCTGCAGGAGGCAGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR CAA 90 bp CTACCCATACTTCCATCTGGTGGAATCCGAGCACTGTCTTTTACTGAGTTTCCTAGTGAGATGATACACTaGGCCATCAATATCGGTAAA +
Preference number: 5 (lower is better)
Translates to: LPILPSGGIRALSFTEFPSEMIH*AINIGK
Trigger: TTTACCGATATTGATGGCCAAGTGTATCATCTCACT...AGGAAACTCAGTAAAAGACAGTGCTCGGATTCCACCAGATGGAAGTATGGGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR CAA 90 bp ACAAAACTTAGCAACTGCTTAAACCAAGGAATTAACGGTTCTGTGTTTTCAAGGGATTCAAACGGACTTTaGCCAGCCATGCAGCCCGAT +
Preference number: 5 (lower is better)
Translates to: TKLSNCLNQGINGSVFSRDSNGL*PAMQPD
Trigger: ATCGGGCTGCATGGCTGGCAAAAGTCCGTTTGAATC...CCTTGAAAACACAGAACCGTTAATTCCTTGGTTTAAGCAGTTGCTAAGTTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263461.11
ENST00000497136.6
CDS-3UTR CAA 90 bp CACTCTTCAATGGGTTCTTCCTTGGGGGACTCAAGCTCATTCAATAAGTCTTTGTCAAATGCTCCATACTaGAGGCAAGCTTCCACAAAT +
Preference number: 5 (lower is better)
Translates to: HSSMGSSLGDSSSFNKSLSNAPY*RQASTN
Trigger: ATTTGTGGAAGCTTGCCTCAAGTATGGAGCATTTGA...CAAAGACTTATTGAATGAGCTTGAGTCCCCCAAGGAAGAACCCATTGAAGAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR CAA 90 bp TTAATCATTTCGATGGCAGATTCATCATTGCCTCTTTCACCACGAAAAGCAATGCCCAGCAATTGCACTTaGCCCTGTTCCGTGAATTTC +
Preference number: 5 (lower is better)
Translates to: LIISMADSSLPLSPRKAMPSNCT*PCSVNF
Trigger: GAAATTCACGGAACAGGGCAAAGTGCAATTGCTGGG...CATTGCTTTTCGTGGTGAAAGAGGCAATGATGAATCTGCCATCGAAATGATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497136.6
CDS TCA 90 bp AGTTGCAAGTTGCTTCTTTCTCAGGCTCTTCAAGTTGTGAGATGGTaGCCACTCATCATGACAAAACACACCAGTCAATATCCTTGCAAA +
Preference number: 5 (lower is better)
Translates to: SCKLLLSQALQVVRW*PLIMTKHTSQYPCK
Trigger: TTTGCAAGGATATTGACTGGTGTGTTTTGTCATGATGAGTGGTCACCATCTCACAACTTGAAGAGCCTGAGAAAGAAGCAACTTGCAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605376.5
CDS-3UTR CAA 90 bp ACAAAACTTAGCAACTGCTTAAACCAAGGAATTAACGGTTCTGTGTTTTCAAGGATCGCGGGAAGCATCTaGATTCCACAACCACTGAAC +
Preference number: 5 (lower is better)
Translates to: TKLSNCLNQGINGSVFSRIAGSI*IPQPLN
Trigger: GTTCAGTGGTTGTGGAATCAAGATGCTTCCCGCGAT...CCTTGAAAACACAGAACCGTTAATTCCTTGGTTTAAGCAGTTGCTAAGTTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263461.11
ENST00000497136.6
CDS-3UTR CAA 90 bp ACAAAACTTAGCAACTGCTTAAACCAAGGAATTAACGGTTCTGTGTTTTCAAGGCTCTTCTTCCATAGTTaGGTGCCAGTGTCGGCATTC +
Preference number: 5 (lower is better)
Translates to: TKLSNCLNQGINGSVFSRLFFHS*VPVSAF
Trigger: GAATGCCGACACTGGCACCAAACTATGGAAGAAGAG...CCTTGAAAACACAGAACCGTTAATTCCTTGGTTTAAGCAGTTGCTAAGTTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263461.11
ENST00000497136.6
CDS-3UTR CAA 90 bp ACAAAACTTAGCAACTGCTTAAACCAAGGAATTAACGGTTCTGTGTTTTCAAGGGCACTTCCCGCAGAATaGAACCTCTGGGATGTTCTT +
Preference number: 5 (lower is better)
Translates to: TKLSNCLNQGINGSVFSRALPAE*NLWDVL
Trigger: AAGAACATCCCAGAGGTTCAATTCTGCGGGAAGTGC...CCTTGAAAACACAGAACCGTTAATTCCTTGGTTTAAGCAGTTGCTAAGTTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263461.11
ENST00000497136.6
CDS-3UTR CAA 90 bp ACCTCACCTATCGGACTAAACATAAATCTTAAAACCTCCTATGGTCCTCTGAGCCTCACTAATCCCATATaGTTTGGTGTTGAGGTAGCA +
Preference number: 5 (lower is better)
Translates to: TSPIGLNINLKTSYGPLSLTNPI*FGVEVA
Trigger: TGCTACCTCAACACCAAACAATATGGGATTAGTGAG...GCTCAGAGGACCATAGGAGGTTTTAAGATTTATGTTTAGTCCGATAGGTGAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263461.11
ENST00000497136.6
CDS-3UTR CAA 90 bp TTGACTTCACATGAGTGGATGCTTAACTCTTTGTGTAGCAGACCACTGGTGAGAATTGTAGGGAAGTTTTaGGACATCTCTCTAAGAAGG +
Preference number: 5 (lower is better)
Translates to: LTSHEWMLNSLCSRPLVRIVGKF*DISLRR
Trigger: CCTTCTTAGAGAGATGTCCAAAAACTTCCCTACAAT...TCTCACCAGTGGTCTGCTACACAAAGAGTTAAGCATCCACTCATGTGAAGTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR CAA 90 bp TCTCTGAAGACTTTTAAATTCCCTTTTACTAGGTGCCTGTTAAGTCTGATCAGCCTCTCGAGTTGCAAGTaGCTTCTTTCTCAGGCTCTT +
Preference number: 5 (lower is better)
Translates to: SLKTFKFPFTRCLLSLISLSSCK*LLSQAL
Trigger: AAGAGCCTGAGAAAGAAGCAACTTGCAACTCGAGAG...GCTGATCAGACTTAACAGGCACCTAGTAAAAGGGAATTTAAAAGTCTTCAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497136.6
CDS-3UTR CAA 90 bp CACTCTTCAATGGGTTCTTCCTTGGGGGACTCAAGCTCATTCAATAAGTCTTTGTTGTATGATCATAAGTaGACCGTTTCACTTCCTGCA +
Preference number: 5 (lower is better)
Translates to: HSSMGSSLGDSSSFNKSLLYDHK*TVSLPA
Trigger: TGCAGGAAGTGAAACGGTCAACTTATGATCATACAA...CAAAGACTTATTGAATGAGCTTGAGTCCCCCAAGGAAGAACCCATTGAAGAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR CAA 90 bp ATGCTTATGTGCTTTTGGGCACACATAGTCTTAGAACAGTGGTCAAACAGCTCAGATGCTTATGTGCTTTaGGGCACACATAGTCTTAGA +
Preference number: 5 (lower is better)
Translates to: MLMCFWAHIVLEQWSNSSDAYVL*GTHSLR
Trigger: TCTAAGACTATGTGTGCCCAAAAGCACATAAGCATC...TGAGCTGTTTGACCACTGTTCTAAGACTATGTGTGCCCAAAAGCACATAAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR CAA 90 bp CAGGGGTTTATCTCTGAATACGACTGCCAAATACTGCTTCAAATGAGATACTTTGTCCATTCAATACCCTaGACTTCACATGAGTGGATG +
Preference number: 5 (lower is better)
Translates to: QGFISEYDCQILLQMRYFVHSIP*TSHEWM
Trigger: CATCCACTCATGTGAAGTCAAGGGTATTGAATGGAC...AAAGTATCTCATTTGAAGCAGTATTTGGCAGTCGTATTCAGAGATAAACCCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR CAA 90 bp CCTATCGGACTAAACATAAATCTTAAAACCTCCTATGGTCCTCTGAGCCTAAAACAATGCTCCTACCTGTaGGAAGATCAACCAGTTGAA +
Preference number: 5 (lower is better)
Translates to: PIGLNINLKTSYGPLSLKQCSYL*EDQPVE
Trigger: TTCAACTGGTTGATCTTCCAACAGGTAGGAGCATTG...TTTTAGGCTCAGAGGACCATAGGAGGTTTTAAGATTTATGTTTAGTCCGATAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263461.11
ENST00000497136.6
CDS-3UTR CAA 90 bp ATGCTTATGTGCTTTTGGGCACACATAGTCTTAGAACAGTGGTCAAACAGCTCAGGTCTGTACATTTCCTaGTATGATCATAAGTTGACC +
Preference number: 5 (lower is better)
Translates to: MLMCFWAHIVLEQWSNSSGLYIS*YDHKLT
Trigger: GGTCAACTTATGATCATACAAGGAAATGTACAGACC...TGAGCTGTTTGACCACTGTTCTAAGACTATGTGTGCCCAAAAGCACATAAGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS-3UTR CAA 90 bp CCTATCGGACTAAACATAAATCTTAAAACCTCCTATGGTCCTCTGAGCCTAAAATCTGCCAATTTGCCATaGGCAATCATATTCGTTGCC +
Preference number: 5 (lower is better)
Translates to: PIGLNINLKTSYGPLSLKSANLP*AIIFVA
Trigger: GGCAACGAATATGATTGCCAATGGCAAATTGGCAGA...TTTTAGGCTCAGAGGACCATAGGAGGTTTTAAGATTTATGTTTAGTCCGATAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263461.11
ENST00000497136.6
CDS-3UTR CAA 90 bp AACTCTTGTTCATCCATTCTAAAGCACGCAGACTTCATAGACATCTCTAGGACTGATGCTTATGTGCTTTaGGGCACACATAGTCTTAGA +
Preference number: 5 (lower is better)
Translates to: NSCSSILKHADFIDISRTDAYVL*GTHSLR
Trigger: TCTAAGACTATGTGTGCCCAAAAGCACATAAGCATC...AGTCCTAGAGATGTCTATGAAGTCTGCGTGCTTTAGAATGGATGAACAAGAGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497136.6
ENST00000605543.5
CDS-3UTR CAA 90 bp AAACTTACTCTCAACATAGATGCTTATGTGCTTTTGGGCACACATAGTCTTAGAGTCCATTCAATACCCTaGACTTCACATGAGTGGATG +
Preference number: 5 (lower is better)
Translates to: KLTLNIDAYVLLGTHSLRVHSIP*TSHEWM
Trigger: CATCCACTCATGTGAAGTCAAGGGTATTGAATGGAC...TCTAAGACTATGTGTGCCCAAAAGCACATAAGCATCTATGTTGAGAGTAAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000605543.5
CDS CCA 90 bp ATTCATAACATAATGGGAATGTTCTCTAAGTTGAAGAGAAACAGGTaGTCCATTACAATTCATCAGAGGCCTCCAAGCTTGGCATTCTAT +
Preference number: 5 (lower is better)
Translates to: IHNIMGMFSKLKRNR*SITIHQRPPSLAFY
Trigger: ATAGAATGCCAAGCTTGGAGGCCTCTGATGAATTGTAATGGACCACCTGTTTCTCTTCAACTTAGAGAACATTCCCATTATGTTATGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462529.2
CDS CCA 90 bp GTGATAGTTTTCCCTGGCCCATTTAACAGTAAATTCTTCAGTCGATaGGAATATAATACCAGACTGAAACTTGGACCTTTACAACATCAG +
Preference number: 5 (lower is better)
Translates to: VIVFPGPFNSKFFSR*EYNTRLKLGPLQHQ
Trigger: CTGATGTTGTAAAGGTCCAAGTTTCAGTCTGGTATTATATTCCCATCGACTGAAGAATTTACTGTTAAATGGGCCAGGGAAAACTATCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604585.5
CDS-3UTR CAA 90 bp AAACTTACTCTCAACATAGATGCTTATGTGCTTTTGGGCACACATAGTCTTAGATTACAAACTGCAGACTaGAGTTCCCATATCATGACC +
Preference number: 5 (lower is better)
Translates to: KLTLNIDAYVLLGTHSLRLQTAD*SSHIMT
Trigger: GGTCATGATATGGGAACTCAAGTCTGCAGTTTGTAA...TCTAAGACTATGTGTGCCCAAAAGCACATAAGCATCTATGTTGAGAGTAAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263461.11
ENST00000497136.6
CDS-3UTR CAA 90 bp ACAAAACTTAGCAACTGCTTAAACCAAGGAATTAACGGTTCTGTGTTTTCAAGGTTACAAACTGCAGACTaGAGTTCCCATATCATGACC +
Preference number: 5 (lower is better)
Translates to: TKLSNCLNQGINGSVFSRLQTAD*SSHIMT
Trigger: GGTCATGATATGGGAACTCAAGTCTGCAGTTTGTAA...CCTTGAAAACACAGAACCGTTAATTCCTTGGTTTAAGCAGTTGCTAAGTTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263461.11
ENST00000497136.6
CDS GCA 90 bp ATCTTTATAAACTGGAAACTAGGGAATAACTACGGTGTTCATGTATaGTGTGAAAGAATGAGTTACCCGCAAAGGAAGTTACATGATTTT +
Preference number: 5 (lower is better)
Translates to: IFINWKLGNNYGVHV*CERMSYPQRKLHDF
Trigger: AAAATCATGTAACTTCCTTTGCGGGTAACTCATTCTTTCACAGCATACATGAACACCGTAGTTATTCCCTAGTTTCCAGTTTATAAAGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604509.5
CDS CCA 72 bp GCTCGGCGTCCTCACCAGTCCACCGCCGCCTTGTTGTaGGCGTTGAGGGCCCCCGTGAGGGTGCGCGCCGAC +
Preference number: 6 (lower is better)
Translates to: ARRPHQSTAALL*ALRAPVRVRAD
Trigger: GTCGGCGCGCACCCTCACGGGGGCCCTCAACGCCCACAACAAGGCGGCGGTGGACTGGTGAGGACGCCGAGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000605178.5
ENST00000605202.5
CDS CAA 90 bp TGCCAGCCCCTGGAAGCTCGGCGTCCTCACCAGTCCACCGCCGCCTaGTTGTGGGCGTTGAGGGCCCCCGTGAGGGTGCGCGCCGACACC +
Preference number: 6 (lower is better)
Translates to: CQPLEARRPHQSTAA*LWALRAPVRVRADT
Trigger: GGTGTCGGCGCGCACCCTCACGGGGGCCCTCAACGCCCACAACAAGGCGGCGGTGGACTGGTGAGGACGCCGAGCTTCCAGGGGCTGGCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000605178.5
ENST00000605202.5
CDS CAA 72 bp GAAGCTCGGCGTCCTCACCAGTCCACCGCCGCCTTGTaGTGGGCGTTGAGGGCCCCCGTGAGGGTGCGCGCC +
Preference number: 6 (lower is better)
Translates to: EARRPHQSTAAL*WALRAPVRVRA
Trigger: GGCGCGCACCCTCACGGGGGCCCTCAACGCCCACAACAAGGCGGCGGTGGACTGGTGAGGACGCCGAGCTTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000605178.5
ENST00000605202.5
CDS CAA 90 bp CAGCCCCTGGAAGCTCGGCGTCCTCACCAGTCCACCGCCGCCTTGTaGTGGGCGTTGAGGGCCCCCGTGAGGGTGCGCGCCGACACCTTG +
Preference number: 6 (lower is better)
Translates to: QPLEARRPHQSTAAL*WALRAPVRVRADTL
Trigger: CAAGGTGTCGGCGCGCACCCTCACGGGGGCCCTCAACGCCCACAACAAGGCGGCGGTGGACTGGTGAGGACGCCGAGCTTCCAGGGGCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000605178.5
ENST00000605202.5
CDS CCA 72 bp AAACCTTGCCAGCCCCAGTCCACCGCCGCCTTGTTGTaGGCGTTGAGGGCCCCCGTGAGGGTGCGCGCCGAC +
Preference number: 6 (lower is better)
Translates to: KPCQPQSTAALL*ALRAPVRVRAD
Trigger: GTCGGCGCGCACCCTCACGGGGGCCCTCAACGCCCACAACAAGGCGGCGGTGGACTGGGGCTGGCAAGGTTT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263461.11
ENST00000605543.5
CDS CAA 72 bp CTGGAAGCTCGGCGTCCTCACCAGTCCACCGCCGCCTaGTTGTGGGCGTTGAGGGCCCCCGTGAGGGTGCGC +
Preference number: 6 (lower is better)
Translates to: LEARRPHQSTAA*LWALRAPVRVR
Trigger: GCGCACCCTCACGGGGGCCCTCAACGCCCACAACAAGGCGGCGGTGGACTGGTGAGGACGCCGAGCTTCCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000605178.5
ENST00000605202.5
CDS CCA 72 bp TGTGTAGGGCAACATCCCGGCGGCCAGCCCAGGACCTaGGCGCTGACCCGCAACCAGGAAGCGGCGGACACT +
Preference number: 6 (lower is better)
Translates to: CVGQHPGGQPRT*ALTRNQEAADT
Trigger: AGTGTCCGCCGCTTCCTGGTTGCGGGTCAGCGCCCAGGTCCTGGGCTGGCCGCCGGGATGTTGCCCTACACA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000605202.5
ENST00000605543.5
CDS CAA 72 bp ATTAAACCTTGCCAGCCCCAGTCCACCGCCGCCTTGTaGTGGGCGTTGAGGGCCCCCGTGAGGGTGCGCGCC +
Preference number: 6 (lower is better)
Translates to: IKPCQPQSTAAL*WALRAPVRVRA
Trigger: GGCGCGCACCCTCACGGGGGCCCTCAACGCCCACAACAAGGCGGCGGTGGACTGGGGCTGGCAAGGTTTAAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263461.11
ENST00000605543.5
CDS CAA 72 bp GCAATTAAACCTTGCCAGCCCCAGTCCACCGCCGCCTaGTTGTGGGCGTTGAGGGCCCCCGTGAGGGTGCGC +
Preference number: 6 (lower is better)
Translates to: AIKPCQPQSTAA*LWALRAPVRVR
Trigger: GCGCACCCTCACGGGGGCCCTCAACGCCCACAACAAGGCGGCGGTGGACTGGGGCTGGCAAGGTTTAATTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263461.11
ENST00000605543.5
CDS CCA 72 bp CTTCCCCCTTCCCCCTCACACATTCCTGGCCGATCCTaGCGACCTGGAAGCTCGGCGTCCTCACCAGTCCAC +
Preference number: 6 (lower is better)
Translates to: LPPSPSHIPGRS*RPGSSASSPVH
Trigger: GTGGACTGGTGAGGACGCCGAGCTTCCAGGTCGCCAGGATCGGCCAGGAATGTGTGAGGGGGAAGGGGGAAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000604585.5
CDS TCA 72 bp ATGAGACTCTTCACAGGCTCCCAGAAGCAGGAAGGGTaGGTCGCGTCTGCTCTGCTGGCTGCTCGGAAGGGA +
Preference number: 6 (lower is better)
Translates to: MRLFTGSQKQEG*VASALLAARKG
Trigger: TCCCTTCCGAGCAGCCAGCAGAGCAGACGCGACTCACCCTTCCTGCTTCTGGGAGCCTGTGAAGAGTCTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604714.1
CDS CCA 72 bp TGTCAGGACTGGAGGCCATTGCTAAGGAGCAGGCTCTaGAGCCAGGATTACCCGGGTCACACTTGGGCTCTT +
Preference number: 6 (lower is better)
Translates to: CQDWRPLLRSRL*SQDYPGHTWAL
Trigger: AAGAGCCCAAGTGTGACCCGGGTAATCCTGGCTCCAGAGCCTGCTCCTTAGCAATGGCCTCCAGTCCTGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604220.5
CDS CAA 72 bp GCGGGCAGTCCTGAAAGCAGTCCCGTCAGCAGGAACTaGAGGTGCACTTCCCGCAGAATTGAACCTCTGGGA +
Preference number: 6 (lower is better)
Translates to: AGSPESSPVSRN*RCTSRRIEPLG
Trigger: TCCCAGAGGTTCAATTCTGCGGGAAGTGCACCTCAAGTTCCTGCTGACGGGACTGCTTTCAGGACTGCCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000604220.5
ENST00000604585.5
CDS TCA 72 bp CGGGCAGTCCTGAAAGCAGTCCCGTCAGCAGGAACTTaGGGTGCACTTCCCGCAGAATTGAACCTCTGGGAT +
Preference number: 6 (lower is better)
Translates to: RAVLKAVPSAGT*GALPAELNLWD
Trigger: ATCCCAGAGGTTCAATTCTGCGGGAAGTGCACCTCAAGTTCCTGCTGACGGGACTGCTTTCAGGACTGCCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000604220.5
ENST00000604585.5
CDS CAA 72 bp CTGCCATCACTCACTACGAGGGCGGCTGCATTCTCATaGACAGGACAGCACACCATACTGAAGGGACGGACG +
Preference number: 6 (lower is better)
Translates to: LPSLTTRAAAFS*TGQHTILKGRT
Trigger: CGTCCGTCCCTTCAGTATGGTGTGCTGTCCTGTCAATGAGAATGCAGCCGCCCTCGTAGTGAGTGATGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000604585.5
CDS CAA 90 bp AACTGTGGTGCGGGCAGTCCTGAAAGCAGTCCCGTCAGCAGGAACTaGAGGTGCACTTCCCGCAGAATTGAACCTCTGGGATGTTCTTCC +
Preference number: 6 (lower is better)
Translates to: NCGAGSPESSPVSRN*RCTSRRIEPLGCSS
Trigger: GGAAGAACATCCCAGAGGTTCAATTCTGCGGGAAGTGCACCTCAAGTTCCTGCTGACGGGACTGCTTTCAGGACTGCCCGCACCACAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000604220.5
ENST00000604585.5
CDS TCA 72 bp CAGGATGAACACAGGAGACTTTTCGCGGGCAGAGGGTaGTTCCCGGCCATAGTAGGCCATGTCTCAGTCTGT +
Preference number: 6 (lower is better)
Translates to: QDEHRRLFAGRG*FPAIVGHVSVC
Trigger: ACAGACTGAGACATGGCCTACTATGGCCGGGAATCACCCTCTGCCCGCGAAAAGTCTCCTGTGTTCATCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604714.1
CDS TCA 72 bp ACACATACGAATAGCAAACTGTGGTGCGGGCAGTCCTaGAAGCAGTCCCGTCAGCAGGAACTTGAGGTGCAC +
Preference number: 6 (lower is better)
Translates to: THTNSKLWCGQS*KQSRQQELEVH
Trigger: GTGCACCTCAAGTTCCTGCTGACGGGACTGCTTTCAGGACTGCCCGCACCACAGTTTGCTATTCGTATGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000604220.5
ENST00000604585.5
CDS CAA 72 bp ACTCCTGCTGCTACATCCCAGACGATGATCTTCCCATaGACATCAGCAGAAGCAGTCCACCGCCGCCTTGTT +
Preference number: 6 (lower is better)
Translates to: TPAATSQTMIFP*TSAEAVHRRLV
Trigger: AACAAGGCGGCGGTGGACTGCTTCTGCTGATGTCAATGGGAAGATCATCGTCTGGGATGTAGCAGCAGGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605069.5
CDS CAA 72 bp CTCGCTGGTAAGCACCTGGATAGGCTTGGCATGCTCTaGGATCTCACACTGAGCTACTCCTGCTGCTACATC +
Preference number: 6 (lower is better)
Translates to: LAGKHLDRLGML*DLTLSYSCCYI
Trigger: GATGTAGCAGCAGGAGTAGCTCAGTGTGAGATCCAAGAGCATGCCAAGCCTATCCAGGTGCTTACCAGCGAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605178.5
CDS CAA 90 bp ATCATGACCCTGCCATCACTCACTACGAGGGCGGCTGCATTCTCATaGACAGGACAGCACACCATACTGAAGGGACGGACGGTTTTTGTC +
Preference number: 6 (lower is better)
Translates to: IMTLPSLTTRAAAFS*TGQHTILKGRTVFV
Trigger: GACAAAAACCGTCCGTCCCTTCAGTATGGTGTGCTGTCCTGTCAATGAGAATGCAGCCGCCCTCGTAGTGAGTGATGGCAGGGTCATGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000604585.5
CDS CAA 90 bp TCCCGAATGTTGAGGGCACCTATTGAAACTTGGAACCACCTACTTTaGCCAGCCATGCAGCCCGATTCCACTCGCCGTATGTCTGCAGGT +
Preference number: 6 (lower is better)
Translates to: SRMLRAPIETWNHLL*PAMQPDSTRRMSAG
Trigger: ACCTGCAGACATACGGCGAGTGGAATCGGGCTGCATGGCTGGCAAAAGTAGGTGGTTCCAAGTTTCAATAGGTGCCCTCAACATTCGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603658.1
CDS TCA 72 bp TCCTGGATAGGCTTGGCATGCTCTTGGATCTCACACTaGGCTACTCCTGCTGCTACATCCCAGACGATGATC +
Preference number: 6 (lower is better)
Translates to: SWIGLACSWISH*ATPAATSQTMI
Trigger: GATCATCGTCTGGGATGTAGCAGCAGGAGTAGCTCAGTGTGAGATCCAAGAGCATGCCAAGCCTATCCAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000604585.5
ENST00000605069.5
ENST00000605202.5
CDS TCA 72 bp ACCTGGATAGGCTTGGCATGCTCTTGGATCTCACACTaGGCTACTCCTGCTGCTACATCCCAGACGATGATC +
Preference number: 6 (lower is better)
Translates to: TWIGLACSWISH*ATPAATSQTMI
Trigger: GATCATCGTCTGGGATGTAGCAGCAGGAGTAGCTCAGTGTGAGATCCAAGAGCATGCCAAGCCTATCCAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605178.5
CDS GCA 72 bp TTATTATACCCCAAACAGCCCATGTCCTGTCCTGACTaGACTAGTCTGCTGCCCTCCTTAGAAGCCCAGGCT +
Preference number: 6 (lower is better)
Translates to: LLYPKQPMSCPD*TSLLPSLEAQA
Trigger: AGCCTGGGCTTCTAAGGAGGGCAGCAGACTAGTGCAGTCAGGACAGGACATGGGCTGTTTGGGGTATAATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604509.5
CDS CAA 72 bp TTGAGGGCACCTATTGAAACTTGGAACCACCTACTTTaGCCAGCCATGCAGCCCGATTCCACTCGCCGTATG +
Preference number: 6 (lower is better)
Translates to: LRAPIETWNHLL*PAMQPDSTRRM
Trigger: CATACGGCGAGTGGAATCGGGCTGCATGGCTGGCAAAAGTAGGTGGTTCCAAGTTTCAATAGGTGCCCTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603658.1
CDS CAA 90 bp AACAATACCCTCGCTGGTAAGCACCTGGATAGGCTTGGCATGCTCTaGGATCTCACACTGAGCTACTCCTGCTGCTACATCCCAGACGAT +
Preference number: 6 (lower is better)
Translates to: NNTLAGKHLDRLGML*DLTLSYSCCYIPDD
Trigger: ATCGTCTGGGATGTAGCAGCAGGAGTAGCTCAGTGTGAGATCCAAGAGCATGCCAAGCCTATCCAGGTGCTTACCAGCGAGGGTATTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605178.5
CDS GCA 72 bp GGCATGCTCTTGGATCTCACACTGAGCTACTCCTGCTaGTACATCCCAGACGATGATCTTCCCATTGACATC +
Preference number: 6 (lower is better)
Translates to: GMLLDLTLSYSC*YIPDDDLPIDI
Trigger: GATGTCAATGGGAAGATCATCGTCTGGGATGTAGCAGCAGGAGTAGCTCAGTGTGAGATCCAAGAGCATGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263461.11
ENST00000470052.5
ENST00000497136.6
ENST00000604585.5
ENST00000605069.5
ENST00000605178.5
ENST00000605202.5
CDS GCA 72 bp CTTGGCATGCTCTTGGATCTCACACTGAGCTACTCCTaGTGCTACATCCCAGACGATGATCTTCCCATTGAC +
Preference number: 6 (lower is better)
Translates to: LGMLLDLTLSYS*CYIPDDDLPID
Trigger: GTCAATGGGAAGATCATCGTCTGGGATGTAGCAGCAGGAGTAGCTCAGTGTGAGATCCAAGAGCATGCCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263461.11
ENST00000470052.5
ENST00000497136.6
ENST00000604585.5
ENST00000605069.5
ENST00000605178.5
ENST00000605202.5
CDS GCA 72 bp TATCATGACCCTGCCATCACTCACTACGAGGGCGGCTaGATTCTCATTGACAGGACAGCACACCATACTGAA +
Preference number: 6 (lower is better)
Translates to: YHDPAITHYEGG*ILIDRTAHHTE
Trigger: TTCAGTATGGTGTGCTGTCCTGTCAATGAGAATGCAGCCGCCCTCGTAGTGAGTGATGGCAGGGTCATGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000604585.5
CDS GCA 72 bp CTATTGAAACTTGGAACCACCTACTTTTGCCAGCCATaGAGCCCGATTCCACTCGCCGTATGTCTGCAGGTA +
Preference number: 6 (lower is better)
Translates to: LLKLGTTYFCQP*SPIPLAVCLQV
Trigger: TACCTGCAGACATACGGCGAGTGGAATCGGGCTGCATGGCTGGCAAAAGTAGGTGGTTCCAAGTTTCAATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603658.1
CDS GCA 72 bp TCCCTGGGATCACTAGACACAGGGCCAGTACCATTCTaGTGGCAAATTAGGAACTTGGGGATGAGAGTCAGT +
Preference number: 6 (lower is better)
Translates to: SLGSLDTGPVPF*WQIRNLGMRVS
Trigger: ACTGACTCTCATCCCCAAGTTCCTAATTTGCCAGCAGAATGGTACTGGCCCTGTGTCTAGTGATCCCAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604509.5
CDS CCA 72 bp CTGGGATCACTAGACACAGGGCCAGTACCATTCTGCTaGCAAATTAGGAACTTGGGGATGAGAGTCAGTGGA +
Preference number: 6 (lower is better)
Translates to: LGSLDTGPVPFC*QIRNLGMRVSG
Trigger: TCCACTGACTCTCATCCCCAAGTTCCTAATTTGCCAGCAGAATGGTACTGGCCCTGTGTCTAGTGATCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604509.5
CDS CAA 72 bp CAACCACTGAACATCCTGGATAGGCTTGGCATGCTCTaGGATCTCACACTGAGCTACTCCTGCTGCTACATC +
Preference number: 6 (lower is better)
Translates to: QPLNILDRLGML*DLTLSYSCCYI
Trigger: GATGTAGCAGCAGGAGTAGCTCAGTGTGAGATCCAAGAGCATGCCAAGCCTATCCAGGATGTTCAGTGGTTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000604585.5
ENST00000605069.5
ENST00000605202.5
CDS CAA 90 bp TCCAAGGCTGGTGTAATAAGAAGGCTTTCAAGGCAAGAGAGGCCCTaGGAACAAGGAGATAGGGGCACCACACAGGCTCTCTTTAGTATC +
Preference number: 6 (lower is better)
Translates to: SKAGVIRRLSRQERP*EQGDRGTTQALFSI
Trigger: GATACTAAAGAGAGCCTGTGTGGTGCCCCTATCTCCTTGTTCCAAGGGCCTCTCTTGCCTTGAAAGCCTTCTTATTACACCAGCCTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478567.5
ENST00000604509.5
CDS CAA 90 bp TCCAAGGCTGGTGTAATAAGAAGGCTTTCAAGGCAAGAGAGGCCCTaGGAACAAGGAGATAGGGGCACCACACAGGCTCTAGACAACAAA +
Preference number: 6 (lower is better)
Translates to: SKAGVIRRLSRQERP*EQGDRGTTQALDNK
Trigger: TTTGTTGTCTAGAGCCTGTGTGGTGCCCCTATCTCCTTGTTCCAAGGGCCTCTCTTGCCTTGAAAGCCTTCTTATTACACCAGCCTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605320.1
CDS CAA 90 bp ACTATTTCCATTTCTAACAGGTCTGATGATGGGAGAACCCTTTACTaGCTGGGACTGGGGGCCACATCTGACAGAAAGGGCCTGCCCTTT +
Preference number: 6 (lower is better)
Translates to: TISISNRSDDGRTLY*LGLGATSDRKGLPF
Trigger: AAAGGGCAGGCCCTTTCTGTCAGATGTGGCCCCCAGTCCCAGCAAGTAAAGGGTTCTCCCATCATCAGACCTGTTAGAAATGGAAATAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000604509.5
CDS TCA 72 bp ACACATACGAATAGCAAACTGTGGTGCGGGCAGTCCTaGAAGCAGTCCCGTCAGCAGGAACTTGAAGAGTTT +
Preference number: 6 (lower is better)
Translates to: THTNSKLWCGQS*KQSRQQELEEF
Trigger: AAACTCTTCAAGTTCCTGCTGACGGGACTGCTTTCAGGACTGCCCGCACCACAGTTTGCTATTCGTATGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605543.5
CDS TCA 72 bp GACCCAAGGGTCCAAGCTACACCTCCACGAGTTTACTaGTCCTTCTTGCCAAGTCACAAGCCTCTAATGGAA +
Preference number: 6 (lower is better)
Translates to: DPRVQATPPRVY*SFLPSHKPLME
Trigger: TTCCATTAGAGGCTTGTGACTTGGCAAGAAGGATCAGTAAACTCGTGGAGGTGTAGCTTGGACCCTTGGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604509.5
CDS CAA 90 bp TTGCACTTTGCCCTGTTCCGTGAATTTCGATTACAAACTGCAGACTaGAGTTCCCATATCATGACCCTGCCATCACTCACTACGAGGGCG +
Preference number: 6 (lower is better)
Translates to: LHFALFREFRLQTAD*SSHIMTLPSLTTRA
Trigger: CGCCCTCGTAGTGAGTGATGGCAGGGTCATGATATGGGAACTCAAGTCTGCAGTTTGTAATCGAAATTCACGGAACAGGGCAAAGTGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497136.6
CDS TCA 72 bp GTCTCAGTCTGTACCATCATTACCTTTCGTACCAGCTaGGTCCAAAGCTTCTCCTTCCAGAAGACCCAACCA +
Preference number: 6 (lower is better)
Translates to: VSVCTIITFRTS*VQSFSFQKTQP
Trigger: TGGTTGGGTCTTCTGGAAGGAGAAGCTTTGGACTCAGCTGGTACGAAAGGTAATGATGGTACAGACTGAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604714.1
CDS CCA 72 bp TTTCTATCCCGAATGTTGAGGGCACCTATTGAAACTTaGAACCACCTACTTTTGCCAGCCATGCAGCCCGAT +
Preference number: 6 (lower is better)
Translates to: FLSRMLRAPIET*NHLLLPAMQPD
Trigger: ATCGGGCTGCATGGCTGGCAAAAGTAGGTGGTTCCAAGTTTCAATAGGTGCCCTCAACATTCGGGATAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603658.1
CDS CCA 72 bp GACAGGTCACTTCCAATGAGACTAGAGCAGCAACACTaGACTAAAGACGGGAATGATTCCTGGAAGTTCAGC +
Preference number: 6 (lower is better)
Translates to: DRSLPMRLEQQH*TKDGNDSWKFS
Trigger: GCTGAACTTCCAGGAATCATTCCCGTCTTTAGTCCAGTGTTGCTGCTCTAGTCTCATTGGAAGTGACCTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604509.5
CDS CAA 90 bp ACACCAGAACTACTGTTCCGTGAATTTCGATTACAAACTGCAGACTaGAGTTCCCATATCATGACCCTGCCATCACTCACTACGAGGGCG +
Preference number: 6 (lower is better)
Translates to: TPELLFREFRLQTAD*SSHIMTLPSLTTRA
Trigger: CGCCCTCGTAGTGAGTGATGGCAGGGTCATGATATGGGAACTCAAGTCTGCAGTTTGTAATCGAAATTCACGGAACAGTAGTTCTGGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263461.11
ENST00000604585.5
CDS TCA 72 bp ACTGAGCTTTCTATCCCGAATGTTGAGGGCACCTATTaGAACTTGGAACCACCTACTTTTGCCAGCCATGCA +
Preference number: 6 (lower is better)
Translates to: TELSIPNVEGTY*NLEPPTFASHA
Trigger: TGCATGGCTGGCAAAAGTAGGTGGTTCCAAGTTTCAATAGGTGCCCTCAACATTCGGGATAGAAAGCTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603658.1
CDS CAA 72 bp ACTCCTGCTGCTACATCCCAGACGATGATCTTCCCATaGACATCAGCAGAAGCTAACCGTAAGCAATATGGT +
Preference number: 6 (lower is better)
Translates to: TPAATSQTMIFP*TSAEANRKQYG
Trigger: ACCATATTGCTTACGGTTAGCTTCTGCTGATGTCAATGGGAAGATCATCGTCTGGGATGTAGCAGCAGGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263461.11
ENST00000470052.5
ENST00000497136.6
ENST00000604585.5
ENST00000605178.5
ENST00000605202.5
CDS TCA 72 bp ACTCCTGTGCGTTCTATTGCAATCACACCCACCGTCTaGTTCACCTCAAGGTCAAGGATTAAAATCTCTCGA +
Preference number: 6 (lower is better)
Translates to: TPVRSIAITPTV*FTSRSRIKISR
Trigger: TCGAGAGATTTTAATCCTTGACCTTGAGGTGAATCAGACGGTGGGTGTGATTGCAATAGAACGCACAGGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000604585.5
CDS TCA 72 bp AGTGGATGCTTAACTCTTTGTGTAGCAGACCACTGGTaGGATGGTACACCAGGACAGAACCATTACTTGTAC +
Preference number: 6 (lower is better)
Translates to: SGCLTLCVADHW*DGTPGQNHYLY
Trigger: GTACAAGTAATGGTTCTGTCCTGGTGTACCATCTCACCAGTGGTCTGCTACACAAAGAGTTAAGCATCCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000604220.5
ENST00000604585.5
ENST00000605543.5
CDS CAA 90 bp GAAAGCAGGGTATTACCTGTAAAAATGGAACTCCTGTGCGTTCTATaGCAATCACACCCACCGTCTGATTCACCTCAAGGTCAAGGATTA +
Preference number: 6 (lower is better)
Translates to: ESRVLPVKMELLCVL*QSHPPSDSPQGQGL
Trigger: TAATCCTTGACCTTGAGGTGAATCAGACGGTGGGTGTGATTGCAATAGAACGCACAGGAGTTCCATTTTTACAGGTAATACCCTGCTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000604585.5
CDS CAA 90 bp GAGATGGTGACCACTCATCATGACAAAACACACCAGTCAATATCCTaGCAAAAGTTCATTTACGACCAAGAGCTCAGCGGACACAGAAGA +
Preference number: 6 (lower is better)
Translates to: EMVTTHHDKTHQSIS*QKFIYDQELSGHRR
Trigger: TCTTCTGTGTCCGCTGAGCTCTTGGTCGTAAATGAACTTTTGCAAGGATATTGACTGGTGTGTTTTGTCATGATGAGTGGTCACCATCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000605376.5
CDS TCA 72 bp CTCAAGTGCCATTTAGAAGAAATAAAATGTTCTGGCTaGTGGGTGGATTATAGTGGCTGGCCTGAGCAACAC +
Preference number: 6 (lower is better)
Translates to: LKCHLEEIKCSG*WVDYSGWPEQH
Trigger: GTGTTGCTCAGGCCAGCCACTATAATCCACCCATCAGCCAGAACATTTTATTTCTTCTAAATGGCACTTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604714.1
CDS GCA 72 bp GAAAGCAGGGTATTACCTGTAAAAATGGAACTCCTGTaGGTTCTATTGCAATCACACCCACCGTCTGATTCA +
Preference number: 6 (lower is better)
Translates to: ESRVLPVKMELL*VLLQSHPPSDS
Trigger: TGAATCAGACGGTGGGTGTGATTGCAATAGAACGCACAGGAGTTCCATTTTTACAGGTAATACCCTGCTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000604585.5
CDS GCA 72 bp CCACTCATCATGACAAAACACACCAGTCAATATCCTTaGAAAAGTTCATTTACGACCAAGAGCTCAGCGGAC +
Preference number: 6 (lower is better)
Translates to: PLIMTKHTSQYP*KSSFTTKSSAD
Trigger: GTCCGCTGAGCTCTTGGTCGTAAATGAACTTTTGCAAGGATATTGACTGGTGTGTTTTGTCATGATGAGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000605376.5
CDS CCA 72 bp ATGCTTAACTCTTTGTGTAGCAGACCACTGGTGAGATaGTACACCAGGACAGAACCATTACTTGTACCAACA +
Preference number: 6 (lower is better)
Translates to: MLNSLCSRPLVR*YTRTEPLLVPT
Trigger: TGTTGGTACAAGTAATGGTTCTGTCCTGGTGTACCATCTCACCAGTGGTCTGCTACACAAAGAGTTAAGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000604220.5
ENST00000604585.5
ENST00000605543.5
CDS CAA 72 bp GTATTACCTGTAAAAATGGAACTCCTGTGCGTTCTATaGCAATCACACCCACCGTCTGATTCACCTCAAGGT +
Preference number: 6 (lower is better)
Translates to: VLPVKMELLCVL*QSHPPSDSPQG
Trigger: ACCTTGAGGTGAATCAGACGGTGGGTGTGATTGCAATAGAACGCACAGGAGTTCCATTTTTACAGGTAATAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263461.11
ENST00000497136.6
ENST00000604585.5
CDS CAA 72 bp TTTATAGTGAAAGGAGAGAGTAATAAAGACGACCTGTaGAAGGCAGGAATGTTCTACACAGGAGGAGCCCGA +
Preference number: 6 (lower is better)
Translates to: FIVKGESNKDDL*KAGMFYTGGAR
Trigger: TCGGGCTCCTCCTGTGTAGAACATTCCTGCCTTCAACAGGTCGTCTTTATTACTCTCTCCTTTCACTATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470052.5
CDS CAA 72 bp ACCACTCATCATGACAAAACACACCAGTCAATATCCTaGCAAAAGTTCATTTACGACCAAGAGCTCAGCGGA +
Preference number: 6 (lower is better)
Translates to: TTHHDKTHQSIS*QKFIYDQELSG
Trigger: TCCGCTGAGCTCTTGGTCGTAAATGAACTTTTGCAAGGATATTGACTGGTGTGTTTTGTCATGATGAGTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000605376.5
CDS TCA 72 bp TTGCTTCTTTCTCAGGCTCTTCAAGTTGTGAGATGGTaGCCACTCATCATGACAAAACACACCAGTCAATAT +
Preference number: 6 (lower is better)
Translates to: LLLSQALQVVRW*PLIMTKHTSQY
Trigger: ATATTGACTGGTGTGTTTTGTCATGATGAGTGGTCACCATCTCACAACTTGAAGAGCCTGAGAAAGAAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605376.5
CDS CCA 72 bp ATAATGGGAATGTTCTCTAAGTTGAAGAGAAACAGGTaGTCCATTACAATTCATCAGAGGCCTCCAAGCTTG +
Preference number: 6 (lower is better)
Translates to: IMGMFSKLKRNR*SITIHQRPPSL
Trigger: CAAGCTTGGAGGCCTCTGATGAATTGTAATGGACCACCTGTTTCTCTTCAACTTAGAGAACATTCCCATTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462529.2
CDS GCA 72 bp AACTGGAAACTAGGGAATAACTACGGTGTTCATGTATaGTGTGAAAGAATGAGTTACCCGCAAAGGAAGTTA +
Preference number: 6 (lower is better)
Translates to: NWKLGNNYGVHV*CERMSYPQRKL
Trigger: TAACTTCCTTTGCGGGTAACTCATTCTTTCACAGCATACATGAACACCGTAGTTATTCCCTAGTTTCCAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604509.5
CDS CCA 72 bp TTCCCTGGCCCATTTAACAGTAAATTCTTCAGTCGATaGGAATATAATACCAGACTGAAACTTGGACCTTTA +
Preference number: 6 (lower is better)
Translates to: FPGPFNSKFFSR*EYNTRLKLGPL
Trigger: TAAAGGTCCAAGTTTCAGTCTGGTATTATATTCCCATCGACTGAAGAATTTACTGTTAAATGGGCCAGGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604585.5
CDS TCA 72 bp GTAAATTCTTCAGTCGATGGGAATATAATACCAGACTaGAACTTGGACCTTTACAACATCAGCTTTATGCTT +
Preference number: 6 (lower is better)
Translates to: VNSSVDGNIIPD*NLDLYNISFML
Trigger: AAGCATAAAGCTGATGTTGTAAAGGTCCAAGTTTCAGTCTGGTATTATATTCCCATCGACTGAAGAATTTAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604585.5
CDS GCA 72 bp AACAAGATTTCATTCTTGGCTTATACCTGGATACTCTaGCTTTCAAGTCCCAGAAATTTAAATTTCCATCCA +
Preference number: 6 (lower is better)
Translates to: NKISFLAYTWIL*LSSPRNLNFHP
Trigger: TGGATGGAAATTTAAATTTCTGGGACTTGAAAGGCAGAGTATCCAGGTATAAGCCAAGAATGAAATCTTGTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604509.5