RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for WDR1 (Homo sapiens)

Ensembl gene IDs: ENSG00000071127

Ensembl transcript IDs: ENST00000264785.11, ENST00000382451.6, ENST00000382452.6, ENST00000499869.7, ENST00000502702.5, ENST00000502962.5, ENST00000504739.5, ENST00000505543.5, ENST00000505851.5, ENST00000506246.5, ENST00000508079.1, ENST00000508949.5, ENST00000509600.1, ENST00000509695.1, ENST00000510848.5, ENST00000514319.5, ENST00000515018.1, ENST00000515743.5

Found 672 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AACTGTTACTGTCTAAAGCTTTCAGAAGAACGTGTACAGACACCCTaGAGAGACGAGGGTCATGACTGGGCCCTCCTGCCTCTTGTGGTG +
Preference number: 1 (lower is better)
Translates to: NCYCLKLSEERVQTP*RDEGHDWALLPLVV
Trigger: CACCACAAGAGGCAGGAGGGCCCAGTCATGACCCTCGTCTCTGCAGGGTGTCTGTACACGTTCTTCTGAAAGCTTTAGACAGTAACAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
3UTR TCA 90 bp GAAGAGGGAAAGACAGGGGAACATCAAAGCATGATGGTGAAACGGTaGCCAGGACACCTCGGTCTGGCTAACAAGGGTTCTAAAAACTTG +
Preference number: 1 (lower is better)
Translates to: EEGKTGEHQSMMVKR*PGHLGLANKGSKNL
Trigger: CAAGTTTTTAGAACCCTTGTTAGCCAGACCGAGGTGTCCTGGTCACCGTTTCACCATCATGCTTTGATGTTCCCCTGTCTTTCCCTCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
3UTR GCA 90 bp ACAGACATCTGTTCAACACAGAATTCCGGCTTTGCTGAACTGCAATaGATATTCCCTCTTCTCACTAGTACAGAAATGTTCTGCAGGCAG +
Preference number: 1 (lower is better)
Translates to: TDICSTQNSGFAELQ*IFPLLTSTEMFCRQ
Trigger: CTGCCTGCAGAACATTTCTGTACTAGTGAGAAGAGGGAATATGCATTGCAGTTCAGCAAAGCCGGAATTCTGTGTTGAACAGATGTCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
3UTR-3UTR TCA 90 bp CAGACACCCTGCAGAGACGAGGGTCATGACTGGGCCCTCCTGCCTCTTGTGGTGTTAAACTCTAGTCCCTaGTTCGGTCCATCCAGAGGC +
Preference number: 2 (lower is better)
Translates to: QTPCRDEGHDWALLPLVVLNSSP*FGPSRG
Trigger: GCCTCTGGATGGACCGAATCAGGGACTAGAGTTTAA...CACCACAAGAGGCAGGAGGGCCCAGTCATGACCCTCGTCTCTGCAGGGTGTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
3UTR-3UTR TCA 90 bp AGACACCCTGCAGAGACGAGGGTCATGACTGGGCCCTCCTGCCTCTTGTGGTGGTTAAACTCTAGTCCCTaGTTCGGTCCATCCAGAGGC +
Preference number: 2 (lower is better)
Translates to: RHPAETRVMTGPSCLLWWLNSSP*FGPSRG
Trigger: GCCTCTGGATGGACCGAATCAGGGACTAGAGTTTAA...CCACCACAAGAGGCAGGAGGGCCCAGTCATGACCCTCGTCTCTGCAGGGTGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
3UTR-3UTR CCA 90 bp GGTGACCAGGACACCTCGGTCTGGCTAACAAGGGTTCTAAAAACTTGGACACGGGGGCTCTGTGTGCTTTaGAGGCTACTGCCTCTGGAA +
Preference number: 2 (lower is better)
Translates to: GDQDTSVWLTRVLKTWTRGLCVL*RLLPLE
Trigger: TTCCAGAGGCAGTAGCCTCCAAAGCACACAGAGCCC...CCGTGTCCAAGTTTTTAGAACCCTTGTTAGCCAGACCGAGGTGTCCTGGTCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
3UTR-3UTR TCA 90 bp AACGGTGACCAGGACACCTCGGTCTGGCTAACAAGGGTTCTAAAAACTTGGACATTGTGTGTCCCCATCTaGTCTGGAGGTGGCGCTCTG +
Preference number: 2 (lower is better)
Translates to: NGDQDTSVWLTRVLKTWTLCVPI*SGGGAL
Trigger: CAGAGCGCCACCTCCAGATCAGATGGGGACACACAA...TGTCCAAGTTTTTAGAACCCTTGTTAGCCAGACCGAGGTGTCCTGGTCACCGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
3UTR-3UTR TCA 90 bp GGTGACCAGGACACCTCGGTCTGGCTAACAAGGGTTCTAAAAACTTGGACACGGTTAAACTCTAGTCCCTaGTTCGGTCCATCCAGAGGC +
Preference number: 2 (lower is better)
Translates to: GDQDTSVWLTRVLKTWTRLNSSP*FGPSRG
Trigger: GCCTCTGGATGGACCGAATCAGGGACTAGAGTTTAA...CCGTGTCCAAGTTTTTAGAACCCTTGTTAGCCAGACCGAGGTGTCCTGGTCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
3UTR-3UTR CCA 90 bp GGTGACCAGGACACCTCGGTCTGGCTAACAAGGGTTCTAAAAACTTGGACACGGGGTTTGGTTGGGCTGTaGGTTTTAGTTATGCTCCAC +
Preference number: 2 (lower is better)
Translates to: GDQDTSVWLTRVLKTWTRGLVGL*VLVMLH
Trigger: GTGGAGCATAACTAAAACCCACAGCCCAACCAAACC...CCGTGTCCAAGTTTTTAGAACCCTTGTTAGCCAGACCGAGGTGTCCTGGTCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
3UTR-3UTR CCA 90 bp CAGGCTAATCTCTTAAAGCGCTCAAAGTGTTTTCACAAGTGCAAGGGGAGGGATTGTCCCCATCTGATCTaGAGGTGGCGCTCTGAAGGC +
Preference number: 2 (lower is better)
Translates to: QANLLKRSKCFHKCKGRDCPHLI*RWRSEG
Trigger: GCCTTCAGAGCGCCACCTCCAGATCAGATGGGGACA...ATCCCTCCCCTTGCACTTGTGAAAACACTTTGAGCGCTTTAAGAGATTAGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
3UTR-3UTR TCA 90 bp GTTTTCACAAGTGCAAGGGGAGGGATTGTTCTCAGCCAACATTTACCAGTGATTCTGTACAACCTCCCCTaGCAGATAGTGAGAGCCGCG +
Preference number: 2 (lower is better)
Translates to: VFTSARGGIVLSQHLPVILYNLP*QIVRAA
Trigger: CGCGGCTCTCACTATCTGTCAGGGGAGGTTGTACAG...AATCACTGGTAAATGTTGGCTGAGAACAATCCCTCCCCTTGCACTTGTGAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
3UTR-3UTR CCA 90 bp ATGTGCAAACTGTTACTGTCTAAAGCTTTCAGAAGAACGTGTACAGACACCCTGGACGAGGGTCATGACTaGGCCCTCCTGCCTCTTGTG +
Preference number: 2 (lower is better)
Translates to: MCKLLLSKAFRRTCTDTLDEGHD*ALLPLV
Trigger: CACAAGAGGCAGGAGGGCCCAGTCATGACCCTCGTC...CAGGGTGTCTGTACACGTTCTTCTGAAAGCTTTAGACAGTAACAGTTTGCACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
3UTR-3UTR CCA 90 bp TCATGTGCAAACTGTTACTGTCTAAAGCTTTCAGAAGAACGTGTACAGACACCCGACGAGGGTCATGACTaGGCCCTCCTGCCTCTTGTG +
Preference number: 2 (lower is better)
Translates to: SCANCYCLKLSEERVQTPDEGHD*ALLPLV
Trigger: CACAAGAGGCAGGAGGGCCCAGTCATGACCCTCGTC...GGGTGTCTGTACACGTTCTTCTGAAAGCTTTAGACAGTAACAGTTTGCACATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
3UTR-3UTR TCA 90 bp AACGGTGACCAGGACACCTCGGTCTGGCTAACAAGGGTTCTAAAAACTTGGACAGAATTCCGGCTTTGCTaGACTGCAATGCATATTCCC +
Preference number: 2 (lower is better)
Translates to: NGDQDTSVWLTRVLKTWTEFRLC*TAMHIP
Trigger: GGGAATATGCATTGCAGTTCAGCAAAGCCGGAATTC...TGTCCAAGTTTTTAGAACCCTTGTTAGCCAGACCGAGGTGTCCTGGTCACCGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
3UTR-3UTR GCA 90 bp GGTGACCAGGACACCTCGGTCTGGCTAACAAGGGTTCTAAAAACTTGGACACGGTTTGCTGAACTGCAATaGATATTCCCTCTTCTCACT +
Preference number: 2 (lower is better)
Translates to: GDQDTSVWLTRVLKTWTRFAELQ*IFPLLT
Trigger: AGTGAGAAGAGGGAATATGCATTGCAGTTCAGCAAA...CCGTGTCCAAGTTTTTAGAACCCTTGTTAGCCAGACCGAGGTGTCCTGGTCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
3UTR-3UTR CCA 90 bp TATTCCCTCTTCTCACTAGTACAGAAATGTTCTGCAGGCAGGAACATGAGCCCCGGAGGCTACTGCCTCTaGAATGTTTCGCATTCTCAA +
Preference number: 2 (lower is better)
Translates to: YSLFSLVQKCSAGRNMSPGGYCL*NVSHSQ
Trigger: TTGAGAATGCGAAACATTCCAGAGGCAGTAGCCTCC...GGGGCTCATGTTCCTGCCTGCAGAACATTTCTGTACTAGTGAGAAGAGGGAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
3UTR CAA 90 bp TGCTTTGGAGGCTACTGCCTCTGGAATGTTTCGCATTCTCAAGGTTaGGTTGGGCTGTGGGTTTTAGTTATGCTCCACACATTGTTTAGG +
Preference number: 2 (lower is better)
Translates to: CFGGYCLWNVSHSQG*VGLWVLVMLHTLFR
Trigger: CCTAAACAATGTGTGGAGCATAACTAAAACCCACAGCCCAACCAAACCTTGAGAATGCGAAACATTCCAGAGGCAGTAGCCTCCAAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
3UTR-3UTR TCA 90 bp TCTCAGGCTAATCTCTTAAAGCGCTCAAAGTGTTTTCACAAGTGCAAGGGGAGGGAATTCCGGCTTTGCTaGACTGCAATGCATATTCCC +
Preference number: 2 (lower is better)
Translates to: SQANLLKRSKCFHKCKGREFRLC*TAMHIP
Trigger: GGGAATATGCATTGCAGTTCAGCAAAGCCGGAATTC...CCTCCCCTTGCACTTGTGAAAACACTTTGAGCGCTTTAAGAGATTAGCCTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
3UTR-3UTR CCA 90 bp ACACGCAAAAACACTCCCAATCACGGTGCTTTATACTTACTTTTAATTTCTGCAGACGAGGGTCATGACTaGGCCCTCCTGCCTCTTGTG +
Preference number: 2 (lower is better)
Translates to: TRKNTPNHGALYLLLISADEGHD*ALLPLV
Trigger: CACAAGAGGCAGGAGGGCCCAGTCATGACCCTCGTC...TGCAGAAATTAAAAGTAAGTATAAAGCACCGTGATTGGGAGTGTTTTTGCGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
3UTR-3UTR CCA 90 bp CACACGCAAAAACACTCCCAATCACGGTGCTTTATACTTACTTTTAATTTCTGCCATCTGATCTGGAGGTaGCGCTCTGAAGGCAGCCAC +
Preference number: 2 (lower is better)
Translates to: HTQKHSQSRCFILTFNFCHLIWR*RSEGSH
Trigger: GTGGCTGCCTTCAGAGCGCCACCTCCAGATCAGATG...GCAGAAATTAAAAGTAAGTATAAAGCACCGTGATTGGGAGTGTTTTTGCGTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
3UTR-3UTR TCA 90 bp ACACGCAAAAACACTCCCAATCACGGTGCTTTATACTTACTTTTAATTTCTGCACTGTACAACCTCCCCTaGCAGATAGTGAGAGCCGCG +
Preference number: 2 (lower is better)
Translates to: TRKNTPNHGALYLLLISALYNLP*QIVRAA
Trigger: CGCGGCTCTCACTATCTGTCAGGGGAGGTTGTACAG...TGCAGAAATTAAAAGTAAGTATAAAGCACCGTGATTGGGAGTGTTTTTGCGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
3UTR-3UTR TCA 90 bp TACAGTGACTTCATCTTTGTCCTTAAATTAACCTTTGCTCTTGAGAGCAGAAGATTGTGTGTCCCCATCTaGTCTGGAGGTGGCGCTCTG +
Preference number: 2 (lower is better)
Translates to: YSDFIFVLKLTFALESRRLCVPI*SGGGAL
Trigger: CAGAGCGCCACCTCCAGATCAGATGGGGACACACAA...TCTTCTGCTCTCAAGAGCAAAGGTTAATTTAAGGACAAAGATGAAGTCACTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
3UTR-3UTR CCA 90 bp TACAGTGACTTCATCTTTGTCCTTAAATTAACCTTTGCTCTTGAGAGCAGAAGATGTCCCCATCTGATCTaGAGGTGGCGCTCTGAAGGC +
Preference number: 2 (lower is better)
Translates to: YSDFIFVLKLTFALESRRCPHLI*RWRSEG
Trigger: GCCTTCAGAGCGCCACCTCCAGATCAGATGGGGACA...TCTTCTGCTCTCAAGAGCAAAGGTTAATTTAAGGACAAAGATGAAGTCACTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
3UTR CAA 90 bp CACACACTAGGGAGACAGACATCTGTTCAACACAGAATTCCGGCTTaGCTGAACTGCAATGCATATTCCCTCTTCTCACTAGTACAGAAA +
Preference number: 2 (lower is better)
Translates to: HTLGRQTSVQHRIPA*LNCNAYSLFSLVQK
Trigger: TTTCTGTACTAGTGAGAAGAGGGAATATGCATTGCAGTTCAGCAAAGCCGGAATTCTGTGTTGAACAGATGTCTGTCTCCCTAGTGTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
3UTR-3UTR GCA 90 bp TACAGTGACTTCATCTTTGTCCTTAAATTAACCTTTGCTCTTGAGAGCAGAAGACGTGTACAGACACCCTaGAGAGACGAGGGTCATGAC +
Preference number: 2 (lower is better)
Translates to: YSDFIFVLKLTFALESRRRVQTP*RDEGHD
Trigger: GTCATGACCCTCGTCTCTGCAGGGTGTCTGTACACG...TCTTCTGCTCTCAAGAGCAAAGGTTAATTTAAGGACAAAGATGAAGTCACTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
3UTR-3UTR TCA 90 bp CACACGCAAAAACACTCCCAATCACGGTGCTTTATACTTACTTTTAATTTCTGCTTAAACTCTAGTCCCTaGTTCGGTCCATCCAGAGGC +
Preference number: 2 (lower is better)
Translates to: HTQKHSQSRCFILTFNFCLNSSP*FGPSRG
Trigger: GCCTCTGGATGGACCGAATCAGGGACTAGAGTTTAA...GCAGAAATTAAAAGTAAGTATAAAGCACCGTGATTGGGAGTGTTTTTGCGTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
3UTR-3UTR GCA 90 bp TCTCAGGCTAATCTCTTAAAGCGCTCAAAGTGTTTTCACAAGTGCAAGGGGAGGTTTGCTGAACTGCAATaGATATTCCCTCTTCTCACT +
Preference number: 2 (lower is better)
Translates to: SQANLLKRSKCFHKCKGRFAELQ*IFPLLT
Trigger: AGTGAGAAGAGGGAATATGCATTGCAGTTCAGCAAA...CCTCCCCTTGCACTTGTGAAAACACTTTGAGCGCTTTAAGAGATTAGCCTGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
3UTR-3UTR TCA 90 bp CACACGCAAAAACACTCCCAATCACGGTGCTTTATACTTACTTTTAATTTCTGCGAATTCCGGCTTTGCTaGACTGCAATGCATATTCCC +
Preference number: 2 (lower is better)
Translates to: HTQKHSQSRCFILTFNFCEFRLC*TAMHIP
Trigger: GGGAATATGCATTGCAGTTCAGCAAAGCCGGAATTC...GCAGAAATTAAAAGTAAGTATAAAGCACCGTGATTGGGAGTGTTTTTGCGTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
3UTR-3UTR GCA 90 bp CACACGCAAAAACACTCCCAATCACGGTGCTTTATACTTACTTTTAATTTCTGCAGTACAGAAATGTTCTaGAGGCAGGAACATGAGCCC +
Preference number: 2 (lower is better)
Translates to: HTQKHSQSRCFILTFNFCSTEMF*RQEHEP
Trigger: GGGCTCATGTTCCTGCCTGCAGAACATTTCTGTACT...GCAGAAATTAAAAGTAAGTATAAAGCACCGTGATTGGGAGTGTTTTTGCGTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
3UTR CAA 90 bp TCTCAAGGTTTGGTTGGGCTGTGGGTTTTAGTTATGCTCCACACATaGTTTAGGTGCTCGCTTTATTTTTCATGTGCAAACTGTTACTGT +
Preference number: 2 (lower is better)
Translates to: SQGLVGLWVLVMLHT*FRCSLYFSCANCYC
Trigger: ACAGTAACAGTTTGCACATGAAAAATAAAGCGAGCACCTAAACAATGTGTGGAGCATAACTAAAACCCACAGCCCAACCAAACCTTGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
3UTR-3UTR TCA 90 bp CACACGCAAAAACACTCCCAATCACGGTGCTTTATACTTACTTTTAATTTCTGCATTAACCTTTGCTCTTaGGAGCAGAAGAGGGAAAGA +
Preference number: 2 (lower is better)
Translates to: HTQKHSQSRCFILTFNFCINLCS*EQKRER
Trigger: TCTTTCCCTCTTCTGCTCTCAAGAGCAAAGGTTAAT...GCAGAAATTAAAAGTAAGTATAAAGCACCGTGATTGGGAGTGTTTTTGCGTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
3UTR-3UTR TCA 90 bp TTATGCTCCACACATTGTTTAGGTGCTCGCTTTATTTTTCATGTGCAAACTGTTACAGAAATAGAGAAATaGCATGTTCCGCTGCAGTTA +
Preference number: 2 (lower is better)
Translates to: LCSTHCLGARFIFHVQTVTEIEK*HVPLQL
Trigger: TAACTGCAGCGGAACATGTCATTTCTCTATTTCTGT...AACAGTTTGCACATGAAAAATAAAGCGAGCACCTAAACAATGTGTGGAGCATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
3UTR-3UTR GCA 90 bp ACACGCAAAAACACTCCCAATCACGGTGCTTTATACTTACTTTTAATTTCTGCATTTGCTGAACTGCAATaGATATTCCCTCTTCTCACT +
Preference number: 2 (lower is better)
Translates to: TRKNTPNHGALYLLLISAFAELQ*IFPLLT
Trigger: AGTGAGAAGAGGGAATATGCATTGCAGTTCAGCAAA...TGCAGAAATTAAAAGTAAGTATAAAGCACCGTGATTGGGAGTGTTTTTGCGTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
3UTR CCA 72 bp CGTGTACAGACACCCTGCAGAGACGAGGGTCATGACTaGGCCCTCCTGCCTCTTGTGGTGGGGTGGGGGCAT +
Preference number: 3 (lower is better)
Translates to: RVQTPCRDEGHD*ALLPLVVGWGH
Trigger: ATGCCCCCACCCCACCACAAGAGGCAGGAGGGCCCAGTCATGACCCTCGTCTCTGCAGGGTGTCTGTACACG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
3UTR TCA 72 bp ACAATGAAACATATCCAGGGGTTGTGTGTCCCCATCTaGTCTGGAGGTGGCGCTCTGAAGGCAGCCACAAGG +
Preference number: 3 (lower is better)
Translates to: TMKHIQGLCVPI*SGGGALKAATR
Trigger: CCTTGTGGCTGCCTTCAGAGCGCCACCTCCAGATCAGATGGGGACACACAACCCCTGGATATGTTTCATTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
3UTR GCA 72 bp TGTCTAAAGCTTTCAGAAGAACGTGTACAGACACCCTaGAGAGACGAGGGTCATGACTGGGCCCTCCTGCCT +
Preference number: 3 (lower is better)
Translates to: CLKLSEERVQTP*RDEGHDWALLP
Trigger: AGGCAGGAGGGCCCAGTCATGACCCTCGTCTCTGCAGGGTGTCTGTACACGTTCTTCTGAAAGCTTTAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
3UTR-3UTR CAA 90 bp AACGGTGACCAGGACACCTCGGTCTGGCTAACAAGGGTTCTAAAAACTTGGACATCGCATTCTCAAGGTTaGGTTGGGCTGTGGGTTTTA +
Preference number: 3 (lower is better)
Translates to: NGDQDTSVWLTRVLKTWTSHSQG*VGLWVL
Trigger: TAAAACCCACAGCCCAACCAAACCTTGAGAATGCGA...TGTCCAAGTTTTTAGAACCCTTGTTAGCCAGACCGAGGTGTCCTGGTCACCGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
3UTR-3UTR CAA 90 bp TATTCCCTCTTCTCACTAGTACAGAAATGTTCTGCAGGCAGGAACATGAGCCCCTCGCATTCTCAAGGTTaGGTTGGGCTGTGGGTTTTA +
Preference number: 3 (lower is better)
Translates to: YSLFSLVQKCSAGRNMSPSHSQG*VGLWVL
Trigger: TAAAACCCACAGCCCAACCAAACCTTGAGAATGCGA...GGGGCTCATGTTCCTGCCTGCAGAACATTTCTGTACTAGTGAGAAGAGGGAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
3UTR-3UTR CAA 90 bp ACACGCAAAAACACTCCCAATCACGGTGCTTTATACTTACTTTTAATTTCTGCAGGGGCTCTGTGTGCTTaGGAGGCTACTGCCTCTGGA +
Preference number: 3 (lower is better)
Translates to: TRKNTPNHGALYLLLISAGALCA*EATASG
Trigger: TCCAGAGGCAGTAGCCTCCAAAGCACACAGAGCCCC...TGCAGAAATTAAAAGTAAGTATAAAGCACCGTGATTGGGAGTGTTTTTGCGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
3UTR CCA 72 bp TGGAATGTTTCGCATTCTCAAGGTTTGGTTGGGCTGTaGGTTTTAGTTATGCTCCACACATTGTTTAGGTGC +
Preference number: 3 (lower is better)
Translates to: WNVSHSQGLVGL*VLVMLHTLFRC
Trigger: GCACCTAAACAATGTGTGGAGCATAACTAAAACCCACAGCCCAACCAAACCTTGAGAATGCGAAACATTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
3UTR-3UTR CAA 90 bp TACAGTGACTTCATCTTTGTCCTTAAATTAACCTTTGCTCTTGAGAGCAGAAGACACAGAATTCCGGCTTaGCTGAACTGCAATGCATAT +
Preference number: 3 (lower is better)
Translates to: YSDFIFVLKLTFALESRRHRIPA*LNCNAY
Trigger: ATATGCATTGCAGTTCAGCAAAGCCGGAATTCTGTG...TCTTCTGCTCTCAAGAGCAAAGGTTAATTTAAGGACAAAGATGAAGTCACTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CCA 90 bp CAGACACCCTGCAGAGACGAGGGTCATGACTGGGCCCTCCTGCCTCTTGTGGTGCTGCCCTGCGCGCTGTaGTTGCGGACGCCCCGAACC +
Preference number: 4 (lower is better)
Translates to: QTPCRDEGHDWALLPLVVLPCAL*LRTPRT
Trigger: GGTTCGGGGCGTCCGCAACCACAGCGCGCAGGGCAG...CACCACAAGAGGCAGGAGGGCCCAGTCATGACCCTCGTCTCTGCAGGGTGTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382451.6
ENST00000382452.6
CDS-3UTR GCA 90 bp TATCCAGGGGTTGTGTGTCCCCATCTGATCTGGAGGTGGCGCTCTGAAGGCAGCCCTGCGCGCTGTGGTTaGGGACGCCCCGAACCCGGA +
Preference number: 4 (lower is better)
Translates to: YPGVVCPHLIWRWRSEGSPARCG*GRPEPG
Trigger: TCCGGGTTCGGGGCGTCCGCAACCACAGCGCGCAGG...GCTGCCTTCAGAGCGCCACCTCCAGATCAGATGGGGACACACAACCCCTGGATA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000382451.6
ENST00000382452.6
CDS-3UTR CCA 90 bp AGACACCCTGCAGAGACGAGGGTCATGACTGGGCCCTCCTGCCTCTTGTGGTGGAGGCAGCCCAGCTGCTaGTCCAGAACCGTGGAGCCC +
Preference number: 4 (lower is better)
Translates to: RHPAETRVMTGPSCLLWWRQPSC*SRTVEP
Trigger: GGGCTCCACGGTTCTGGACCAGCAGCTGGGCTGCCT...CCACCACAAGAGGCAGGAGGGCCCAGTCATGACCCTCGTCTCTGCAGGGTGTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR CCA 90 bp CAGACACCCTGCAGAGACGAGGGTCATGACTGGGCCCTCCTGCCTCTTGTGGTGTATCATCGCTTCCCGTaGCCAGCCGGTATGGCCGGC +
Preference number: 4 (lower is better)
Translates to: QTPCRDEGHDWALLPLVVYHRFP*PAGMAG
Trigger: GCCGGCCATACCGGCTGGCCACGGGAAGCGATGATA...CACCACAAGAGGCAGGAGGGCCCAGTCATGACCCTCGTCTCTGCAGGGTGTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382452.6
ENST00000499869.7
CDS-3UTR GCA 90 bp CAGACACCCTGCAGAGACGAGGGTCATGACTGGGCCCTCCTGCCTCTTGTGGTGCATAGGCAGCCCAGCTaGTGGTCCAGAACCGTGGAG +
Preference number: 4 (lower is better)
Translates to: QTPCRDEGHDWALLPLVVHRQPS*WSRTVE
Trigger: CTCCACGGTTCTGGACCAGCAGCTGGGCTGCCTATG...CACCACAAGAGGCAGGAGGGCCCAGTCATGACCCTCGTCTCTGCAGGGTGTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR GCA 90 bp CAGACACCCTGCAGAGACGAGGGTCATGACTGGGCCCTCCTGCCTCTTGTGGTGCTGCAGCTGATGAGCTaGCCCGACTCATCCACGGTC +
Preference number: 4 (lower is better)
Translates to: QTPCRDEGHDWALLPLVVLQLMS*PDSSTV
Trigger: GACCGTGGATGAGTCGGGGCAGCTCATCAGCTGCAG...CACCACAAGAGGCAGGAGGGCCCAGTCATGACCCTCGTCTCTGCAGGGTGTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR TCA 90 bp AGACACCCTGCAGAGACGAGGGTCATGACTGGGCCCTCCTGCCTCTTGTGGTGGTTGTGTGTCCCCATCTaGTCTGGAGGTGGCGCTCTG +
Preference number: 4 (lower is better)
Translates to: RHPAETRVMTGPSCLLWWLCVPI*SGGGAL
Trigger: CAGAGCGCCACCTCCAGATCAGATGGGGACACACAA...CCACCACAAGAGGCAGGAGGGCCCAGTCATGACCCTCGTCTCTGCAGGGTGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR GCA 90 bp TCAGAAGAACGTGTACAGACACCCTGCAGAGACGAGGGTCATGACTGGGCCCTCCCCGCCGGGGTGCACTaGCACAACTTCGGGCTCGTA +
Preference number: 4 (lower is better)
Translates to: SEERVQTPCRDEGHDWALPAGVH*HNFGLV
Trigger: TACGAGCCCGAAGTTGTGGCAGTGCACCCCGGCGGG...GAGGGCCCAGTCATGACCCTCGTCTCTGCAGGGTGTCTGTACACGTTCTTCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR GCA 90 bp GGGGGCATGGGGGCGCGTCACAGAAATAGAGAAATGACATGTTCCGCTGCAGTTGTGTCCCCGCCGGGGTaGACTGCCACAACTTCGGGC +
Preference number: 4 (lower is better)
Translates to: GGMGARHRNREMTCSAAVVSPPG*TATTSG
Trigger: GCCCGAAGTTGTGGCAGTGCACCCCGGCGGGGACAC...AACTGCAGCGGAACATGTCATTTCTCTATTTCTGTGACGCGCCCCCATGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR CCA 90 bp CAGACACCCTGCAGAGACGAGGGTCATGACTGGGCCCTCCTGCCTCTTGTGGTGGCTGGTCCAGAACCGTaGAGCCCATGGGAAATGTGC +
Preference number: 4 (lower is better)
Translates to: QTPCRDEGHDWALLPLVVAGPEP*SPWEMC
Trigger: GCACATTTCCCATGGGCTCCACGGTTCTGGACCAGC...CACCACAAGAGGCAGGAGGGCCCAGTCATGACCCTCGTCTCTGCAGGGTGTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR CCA 90 bp AGACACCCTGCAGAGACGAGGGTCATGACTGGGCCCTCCTGCCTCTTGTGGTGGGACACCTGGTTCGTGTaGCCTTTCCCAGCGAAGGAG +
Preference number: 4 (lower is better)
Translates to: RHPAETRVMTGPSCLLWWDTWFV*PFPAKE
Trigger: CTCCTTCGCTGGGAAAGGCCACACGAACCAGGTGTC...CCACCACAAGAGGCAGGAGGGCCCAGTCATGACCCTCGTCTCTGCAGGGTGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR CCA 90 bp CAGACACCCTGCAGAGACGAGGGTCATGACTGGGCCCTCCTGCCTCTTGTGGTGCATCCACGGTCATCCTaGACACCTGGTTCGTGTGGC +
Preference number: 4 (lower is better)
Translates to: QTPCRDEGHDWALLPLVVHPRSS*TPGSCG
Trigger: GCCACACGAACCAGGTGTCCAGGATGACCGTGGATG...CACCACAAGAGGCAGGAGGGCCCAGTCATGACCCTCGTCTCTGCAGGGTGTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR CCA 90 bp AGACACCCTGCAGAGACGAGGGTCATGACTGGGCCCTCCTGCCTCTTGTGGTGGCATCTGATCTGGAGGTaGCGCTCTGAAGGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: RHPAETRVMTGPSCLLWWHLIWR*RSEGSH
Trigger: GTGGCTGCCTTCAGAGCGCCACCTCCAGATCAGATG...CCACCACAAGAGGCAGGAGGGCCCAGTCATGACCCTCGTCTCTGCAGGGTGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR TCA 90 bp TCAGAAGAACGTGTACAGACACCCTGCAGAGACGAGGGTCATGACTGGGCCCTCCTGGAGGTGGCGCTCTaGAGGCAGCCACAAGGTGTG +
Preference number: 4 (lower is better)
Translates to: SEERVQTPCRDEGHDWALLEVAL*RQPQGV
Trigger: CACACCTTGTGGCTGCCTTCAGAGCGCCACCTCCAG...GAGGGCCCAGTCATGACCCTCGTCTCTGCAGGGTGTCTGTACACGTTCTTCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR GCA 90 bp GGTGACCAGGACACCTCGGTCTGGCTAACAAGGGTTCTAAAAACTTGGACACGGGTGTCCCCGCCGGGGTaGACTGCCACAACTTCGGGC +
Preference number: 4 (lower is better)
Translates to: GDQDTSVWLTRVLKTWTRVSPPG*TATTSG
Trigger: GCCCGAAGTTGTGGCAGTGCACCCCGGCGGGGACAC...CCGTGTCCAAGTTTTTAGAACCCTTGTTAGCCAGACCGAGGTGTCCTGGTCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR GCA 90 bp AGACACCCTGCAGAGACGAGGGTCATGACTGGGCCCTCCTGCCTCTTGTGGTGGCATCCTTCAGCGTGGTaGCCAGGATGGAATACAGGC +
Preference number: 4 (lower is better)
Translates to: RHPAETRVMTGPSCLLWWHPSAW*PGWNTG
Trigger: GCCTGTATTCCATCCTGGGCACCACGCTGAAGGATG...CCACCACAAGAGGCAGGAGGGCCCAGTCATGACCCTCGTCTCTGCAGGGTGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR GCA 90 bp CAGACACCCTGCAGAGACGAGGGTCATGACTGGGCCCTCCTGCCTCTTGTGGTGCGTGTACAGACACCCTaGAGAGACGAGGGTCATGAC +
Preference number: 4 (lower is better)
Translates to: QTPCRDEGHDWALLPLVVRVQTP*RDEGHD
Trigger: GTCATGACCCTCGTCTCTGCAGGGTGTCTGTACACG...CACCACAAGAGGCAGGAGGGCCCAGTCATGACCCTCGTCTCTGCAGGGTGTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR CCA 90 bp AGACACCCTGCAGAGACGAGGGTCATGACTGGGCCCTCCTGCCTCTTGTGGTGGGTCATCCTGGACACCTaGTTCGTGTGGCCTTTCCCA +
Preference number: 4 (lower is better)
Translates to: RHPAETRVMTGPSCLLWWVILDT*FVWPFP
Trigger: TGGGAAAGGCCACACGAACCAGGTGTCCAGGATGAC...CCACCACAAGAGGCAGGAGGGCCCAGTCATGACCCTCGTCTCTGCAGGGTGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR CCA 90 bp CAGACACCCTGCAGAGACGAGGGTCATGACTGGGCCCTCCTGCCTCTTGTGGTGTTGACAGAGGCATCATaGGAGGTCGTGACCAGCGTG +
Preference number: 4 (lower is better)
Translates to: QTPCRDEGHDWALLPLVVLTEAS*EVVTSV
Trigger: CACGCTGGTCACGACCTCCCATGATGCCTCTGTCAA...CACCACAAGAGGCAGGAGGGCCCAGTCATGACCCTCGTCTCTGCAGGGTGTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR CCA 90 bp AGACACCCTGCAGAGACGAGGGTCATGACTGGGCCCTCCTGCCTCTTGTGGTGGGGGCTCTGTGTGCTTTaGAGGCTACTGCCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: RHPAETRVMTGPSCLLWWGLCVL*RLLPLE
Trigger: TTCCAGAGGCAGTAGCCTCCAAAGCACACAGAGCCC...CCACCACAAGAGGCAGGAGGGCCCAGTCATGACCCTCGTCTCTGCAGGGTGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR TCA 90 bp GGGGGCATGGGGGCGCGTCACAGAAATAGAGAAATGACATGTTCCGCTGCAGTTCGGACAGGGAGACACTaGGCAGGTGGTCCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: GGMGARHRNREMTCSAAVRTGRH*AGGPSA
Trigger: GGCAGAAGGACCACCTGCTCAGTGTCTCCCTGTCCG...AACTGCAGCGGAACATGTCATTTCTCTATTTCTGTGACGCGCCCCCATGCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR GCA 90 bp CTAAAGCTTTCAGAAGAACGTGTACAGACACCCTGCAGAGACGAGGGTCATGACCCTGCGCGCTGTGGTTaGGGACGCCCCGAACCCGGA +
Preference number: 4 (lower is better)
Translates to: LKLSEERVQTPCRDEGHDPARCG*GRPEPG
Trigger: TCCGGGTTCGGGGCGTCCGCAACCACAGCGCGCAGG...GTCATGACCCTCGTCTCTGCAGGGTGTCTGTACACGTTCTTCTGAAAGCTTTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382451.6
ENST00000382452.6
CDS-3UTR GCA 90 bp GGTGACCAGGACACCTCGGTCTGGCTAACAAGGGTTCTAAAAACTTGGACACGGGTCGTGACCAGCGTGTaGTCGTCCAGCCAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: GDQDTSVWLTRVLKTWTRVVTSV*SSSQAR
Trigger: CCTGGCCTGGCTGGACGAGCACACGCTGGTCACGAC...CCGTGTCCAAGTTTTTAGAACCCTTGTTAGCCAGACCGAGGTGTCCTGGTCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CCA 90 bp CTGTCTAAAGCTTTCAGAAGAACGTGTACAGACACCCTGCAGAGACGAGGGTCACTGCCCTGCGCGCTGTaGTTGCGGACGCCCCGAACC +
Preference number: 4 (lower is better)
Translates to: LSKAFRRTCTDTLQRRGSLPCAL*LRTPRT
Trigger: GGTTCGGGGCGTCCGCAACCACAGCGCGCAGGGCAG...TGACCCTCGTCTCTGCAGGGTGTCTGTACACGTTCTTCTGAAAGCTTTAGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382451.6
ENST00000382452.6
CDS-3UTR CCA 90 bp AGACACCCTGCAGAGACGAGGGTCATGACTGGGCCCTCCTGCCTCTTGTGGTGGGACGGCTACGCACTTTaGCTGAACGTCCAGTTTCAC +
Preference number: 4 (lower is better)
Translates to: RHPAETRVMTGPSCLLWWDGYAL*LNVQFH
Trigger: GTGAAACTGGACGTTCAGCCAAAGTGCGTAGCCGTC...CCACCACAAGAGGCAGGAGGGCCCAGTCATGACCCTCGTCTCTGCAGGGTGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR CCA 90 bp CAGACACCCTGCAGAGACGAGGGTCATGACTGGGCCCTCCTGCCTCTTGTGGTGGACGGCTACGCACTTTaGCTGAACGTCCAGTTTCAC +
Preference number: 4 (lower is better)
Translates to: QTPCRDEGHDWALLPLVVDGYAL*LNVQFH
Trigger: GTGAAACTGGACGTTCAGCCAAAGTGCGTAGCCGTC...CACCACAAGAGGCAGGAGGGCCCAGTCATGACCCTCGTCTCTGCAGGGTGTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR CCA 90 bp TCAGAAGAACGTGTACAGACACCCTGCAGAGACGAGGGTCATGACTGGGCCCTCGCCAGGCTGCTGACATaGTGCAGCCGGTGTGCATCT +
Preference number: 4 (lower is better)
Translates to: SEERVQTPCRDEGHDWALARLLT*CSRCAS
Trigger: AGATGCACACCGGCTGCACCATGTCAGCAGCCTGGC...GAGGGCCCAGTCATGACCCTCGTCTCTGCAGGGTGTCTGTACACGTTCTTCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR TCA 90 bp TATCCAGGGGTTGTGTGTCCCCATCTGATCTGGAGGTGGCGCTCTGAAGGCAGCGCTCGCCCCCAGCTTTaGCCATATATAGTCAAGCGC +
Preference number: 4 (lower is better)
Translates to: YPGVVCPHLIWRWRSEGSARPQL*PYIVKR
Trigger: GCGCTTGACTATATATGGTCAAAGCTGGGGGCGAGC...GCTGCCTTCAGAGCGCCACCTCCAGATCAGATGGGGACACACAACCCCTGGATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000382451.6
ENST00000382452.6
CDS-3UTR TCA 90 bp TATCCAGGGGTTGTGTGTCCCCATCTGATCTGGAGGTGGCGCTCTGAAGGCAGCAGAATCGCACACAGTTaGCAAAGCGGCTGTGGTCGC +
Preference number: 4 (lower is better)
Translates to: YPGVVCPHLIWRWRSEGSRIAHS*QSGCGR
Trigger: GCGACCACAGCCGCTTTGTCAACTGTGTGCGATTCT...GCTGCCTTCAGAGCGCCACCTCCAGATCAGATGGGGACACACAACCCCTGGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382452.6
ENST00000499869.7
CDS-3UTR TCA 90 bp CTGTCTAAAGCTTTCAGAAGAACGTGTACAGACACCCTGCAGAGACGAGGGTCAGCCAGGCCAGGCTGCTaGCATGGTGCAGCCGGTGTG +
Preference number: 4 (lower is better)
Translates to: LSKAFRRTCTDTLQRRGSARPGC*HGAAGV
Trigger: CACACCGGCTGCACCATGTCAGCAGCCTGGCCTGGC...TGACCCTCGTCTCTGCAGGGTGTCTGTACACGTTCTTCTGAAAGCTTTAGACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR GCA 90 bp AACGGTGACCAGGACACCTCGGTCTGGCTAACAAGGGTTCTAAAAACTTGGACAACGCCCCTCTCCACCTaGGGGAGGCTGGCGAACACC +
Preference number: 4 (lower is better)
Translates to: NGDQDTSVWLTRVLKTWTTPLST*GRLANT
Trigger: GGTGTTCGCCAGCCTCCCGCAGGTGGAGAGGGGCGT...TGTCCAAGTTTTTAGAACCCTTGTTAGCCAGACCGAGGTGTCCTGGTCACCGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR GCA 90 bp AGACACCCTGCAGAGACGAGGGTCATGACTGGGCCCTCCTGCCTCTTGTGGTGGTTGCCGCCGTTTTTATaGACCGTCAGACACTGGATC +
Preference number: 4 (lower is better)
Translates to: RHPAETRVMTGPSCLLWWLPPFL*TVRHWI
Trigger: GATCCAGTGTCTGACGGTGCATAAAAACGGCGGCAA...CCACCACAAGAGGCAGGAGGGCCCAGTCATGACCCTCGTCTCTGCAGGGTGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR GCA 90 bp GGGGGCATGGGGGCGCGTCACAGAAATAGAGAAATGACATGTTCCGCTGCAGTTCTGCAGCTGATGAGCTaGCCCGACTCATCCACGGTC +
Preference number: 4 (lower is better)
Translates to: GGMGARHRNREMTCSAAVLQLMS*PDSSTV
Trigger: GACCGTGGATGAGTCGGGGCAGCTCATCAGCTGCAG...AACTGCAGCGGAACATGTCATTTCTCTATTTCTGTGACGCGCCCCCATGCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR GCA 90 bp CTGTCTAAAGCTTTCAGAAGAACGTGTACAGACACCCTGCAGAGACGAGGGTCAGTGTCCCCGCCGGGGTaGACTGCCACAACTTCGGGC +
Preference number: 4 (lower is better)
Translates to: LSKAFRRTCTDTLQRRGSVSPPG*TATTSG
Trigger: GCCCGAAGTTGTGGCAGTGCACCCCGGCGGGGACAC...TGACCCTCGTCTCTGCAGGGTGTCTGTACACGTTCTTCTGAAAGCTTTAGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR GCA 90 bp CTGTCTAAAGCTTTCAGAAGAACGTGTACAGACACCCTGCAGAGACGAGGGTCAGTCCACACCCCCAATTaGCACCGTGTCCCCGCCGGG +
Preference number: 4 (lower is better)
Translates to: LSKAFRRTCTDTLQRRGSVHTPN*HRVPAG
Trigger: CCCGGCGGGGACACGGTGGCAATTGGGGGTGTGGAC...TGACCCTCGTCTCTGCAGGGTGTCTGTACACGTTCTTCTGAAAGCTTTAGACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR GCA 90 bp AGACACCCTGCAGAGACGAGGGTCATGACTGGGCCCTCCTGCCTCTTGTGGTGGACACCATCATGTCCATaGCACCGGAGGCAAAGTGTT +
Preference number: 4 (lower is better)
Translates to: RHPAETRVMTGPSCLLWWTPSCP*HRRQSV
Trigger: AACACTTTGCCTCCGGTGGCATGGACATGATGGTGT...CCACCACAAGAGGCAGGAGGGCCCAGTCATGACCCTCGTCTCTGCAGGGTGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR CCA 90 bp TCAGAAGAACGTGTACAGACACCCTGCAGAGACGAGGGTCATGACTGGGCCCTCGCTGGTCCAGAACCGTaGAGCCCATGGGAAATGTGC +
Preference number: 4 (lower is better)
Translates to: SEERVQTPCRDEGHDWALAGPEP*SPWEMC
Trigger: GCACATTTCCCATGGGCTCCACGGTTCTGGACCAGC...GAGGGCCCAGTCATGACCCTCGTCTCTGCAGGGTGTCTGTACACGTTCTTCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR CCA 90 bp TATCCAGGGGTTGTGTGTCCCCATCTGATCTGGAGGTGGCGCTCTGAAGGCAGCCGTGCAGGGGCTTGCTaGGGTTGTTTCTGTCCAGAT +
Preference number: 4 (lower is better)
Translates to: YPGVVCPHLIWRWRSEGSRAGAC*GCFCPD
Trigger: ATCTGGACAGAAACAACCCCAGCAAGCCCCTGCACG...GCTGCCTTCAGAGCGCCACCTCCAGATCAGATGGGGACACACAACCCCTGGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CCA 90 bp TCAGAAGAACGTGTACAGACACCCTGCAGAGACGAGGGTCATGACTGGGCCCTCGACACCTGGTTCGTGTaGCCTTTCCCAGCGAAGGAG +
Preference number: 4 (lower is better)
Translates to: SEERVQTPCRDEGHDWALDTWFV*PFPAKE
Trigger: CTCCTTCGCTGGGAAAGGCCACACGAACCAGGTGTC...GAGGGCCCAGTCATGACCCTCGTCTCTGCAGGGTGTCTGTACACGTTCTTCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR CCA 90 bp GGGGGCATGGGGGCGCGTCACAGAAATAGAGAAATGACATGTTCCGCTGCAGTTATCCAGAGGCGGGGGTaGGGCTCCTCAGTAGGTGAT +
Preference number: 4 (lower is better)
Translates to: GGMGARHRNREMTCSAAVIQRRG*GSSVGD
Trigger: ATCACCTACTGAGGAGCCCCACCCCCGCCTCTGGAT...AACTGCAGCGGAACATGTCATTTCTCTATTTCTGTGACGCGCCCCCATGCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR TCA 90 bp CAGACACCCTGCAGAGACGAGGGTCATGACTGGGCCCTCCTGCCTCTTGTGGTGGTTCTCCCCCGTCTCTaGATCCCAGTAATTAATGTG +
Preference number: 4 (lower is better)
Translates to: QTPCRDEGHDWALLPLVVVLPRL*IPVINV
Trigger: CACATTAATTACTGGGATTCAGAGACGGGGGAGAAC...CACCACAAGAGGCAGGAGGGCCCAGTCATGACCCTCGTCTCTGCAGGGTGTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR TCA 90 bp TATCCAGGGGTTGTGTGTCCCCATCTGATCTGGAGGTGGCGCTCTGAAGGCAGCGTGCATCTTGGATCTTaGCTCTGGTTTCCGGGTCAC +
Preference number: 4 (lower is better)
Translates to: YPGVVCPHLIWRWRSEGSVHLGS*LWFPGH
Trigger: GTGACCCGGAAACCAGAGTCAAGATCCAAGATGCAC...GCTGCCTTCAGAGCGCCACCTCCAGATCAGATGGGGACACACAACCCCTGGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR TCA 90 bp GGTGACCAGGACACCTCGGTCTGGCTAACAAGGGTTCTAAAAACTTGGACACGGCATCATGGGAGGTCGTaGCCAGCGTGTGCTCGTCCA +
Preference number: 4 (lower is better)
Translates to: GDQDTSVWLTRVLKTWTRHHGRS*PACARP
Trigger: TGGACGAGCACACGCTGGTCACGACCTCCCATGATG...CCGTGTCCAAGTTTTTAGAACCCTTGTTAGCCAGACCGAGGTGTCCTGGTCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR GCA 90 bp ACAAGGTGTGAGTCACACACTAGGGAGACAGACATCTGTTCAACACAGAATTCCAGCTCGCGCCTGCCCTaGGCGCTGTGGTTGCGGACG +
Preference number: 4 (lower is better)
Translates to: TRCESHTRETDICSTQNSSSRLP*ALWLRT
Trigger: CGTCCGCAACCACAGCGCGCAGGGCAGGCGCGAGCT...GGAATTCTGTGTTGAACAGATGTCTGTCTCCCTAGTGTGTGACTCACACCTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382451.6
ENST00000382452.6
CDS-3UTR GCA 90 bp CAGGCTAATCTCTTAAAGCGCTCAAAGTGTTTTCACAAGTGCAAGGGGAGGGATGGGGCCGGCCCGCGCTaGGAATTACACCTCGCCGAG +
Preference number: 4 (lower is better)
Translates to: QANLLKRSKCFHKCKGRDGAGPR*ELHLAE
Trigger: CTCGGCGAGGTGTAATTCGCAGCGCGGGCCGGCCCC...ATCCCTCCCCTTGCACTTGTGAAAACACTTTGAGCGCTTTAAGAGATTAGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR GCA 90 bp TGTCTAAAGCTTTCAGAAGAACGTGTACAGACACCCTGCAGAGACGAGGGTCATACGCCCCTCTCCACCTaGGGGAGGCTGGCGAACACC +
Preference number: 4 (lower is better)
Translates to: CLKLSEERVQTPCRDEGHTPLST*GRLANT
Trigger: GGTGTTCGCCAGCCTCCCGCAGGTGGAGAGGGGCGT...ATGACCCTCGTCTCTGCAGGGTGTCTGTACACGTTCTTCTGAAAGCTTTAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR GCA 90 bp TATTCCCTCTTCTCACTAGTACAGAAATGTTCTGCAGGCAGGAACATGAGCCCCCACCGTCGTGGGCCTTaGTTCCGCCCAGCGCGCACA +
Preference number: 4 (lower is better)
Translates to: YSLFSLVQKCSAGRNMSPHRRGP*FRPART
Trigger: TGTGCGCGCTGGGCGGAAGCAAGGCCCACGACGGTG...GGGGCTCATGTTCCTGCCTGCAGAACATTTCTGTACTAGTGAGAAGAGGGAATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR GCA 90 bp TATCCAGGGGTTGTGTGTCCCCATCTGATCTGGAGGTGGCGCTCTGAAGGCAGCGGACAATCTGTCCAATaGACACGACCACGGCGTATC +
Preference number: 4 (lower is better)
Translates to: YPGVVCPHLIWRWRSEGSGQSVQ*TRPRRI
Trigger: GATACGCCGTGGTCGTGTGCATTGGACAGATTGTCC...GCTGCCTTCAGAGCGCCACCTCCAGATCAGATGGGGACACACAACCCCTGGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR GCA 90 bp CTGTCTAAAGCTTTCAGAAGAACGTGTACAGACACCCTGCAGAGACGAGGGTCACCCGCCGGGGTGCACTaGCACAACTTCGGGCTCGTA +
Preference number: 4 (lower is better)
Translates to: LSKAFRRTCTDTLQRRGSPAGVH*HNFGLV
Trigger: TACGAGCCCGAAGTTGTGGCAGTGCACCCCGGCGGG...TGACCCTCGTCTCTGCAGGGTGTCTGTACACGTTCTTCTGAAAGCTTTAGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR GCA 90 bp GGTGACCAGGACACCTCGGTCTGGCTAACAAGGGTTCTAAAAACTTGGACACGGGCCAGGGGCTCTGTGTaGTTTGGAGGCTACTGCCTC +
Preference number: 4 (lower is better)
Translates to: GDQDTSVWLTRVLKTWTRARGSV*FGGYCL
Trigger: GAGGCAGTAGCCTCCAAAGCACACAGAGCCCCTGGC...CCGTGTCCAAGTTTTTAGAACCCTTGTTAGCCAGACCGAGGTGTCCTGGTCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR TCA 90 bp AACGGTGACCAGGACACCTCGGTCTGGCTAACAAGGGTTCTAAAAACTTGGACATGTAGTCCCGCAGCATaGGGCTGGTGTACCGCACGG +
Preference number: 4 (lower is better)
Translates to: NGDQDTSVWLTRVLKTWTCSPAA*GWCTAR
Trigger: CCGTGCGGTACACCAGCCTCATGCTGCGGGACTACA...TGTCCAAGTTTTTAGAACCCTTGTTAGCCAGACCGAGGTGTCCTGGTCACCGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR GCA 90 bp TCAGAAGAACGTGTACAGACACCCTGCAGAGACGAGGGTCATGACTGGGCCCTCAACAGGTGCTCCTTCTaGGTGGTATCCCAGATCCTC +
Preference number: 4 (lower is better)
Translates to: SEERVQTPCRDEGHDWALNRCSF*VVSQIL
Trigger: GAGGATCTGGGATACCACGCAGAAGGAGCACCTGTT...GAGGGCCCAGTCATGACCCTCGTCTCTGCAGGGTGTCTGTACACGTTCTTCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382452.6
ENST00000499869.7
CDS-3UTR GCA 90 bp GCAAACTGTTACTGTCTAAAGCTTTCAGAAGAACGTGTACAGACACCCTGCAGAAGCTCGCGCCTGCCCTaGGCGCTGTGGTTGCGGACG +
Preference number: 4 (lower is better)
Translates to: ANCYCLKLSEERVQTPCRSSRLP*ALWLRT
Trigger: CGTCCGCAACCACAGCGCGCAGGGCAGGCGCGAGCT...TCTGCAGGGTGTCTGTACACGTTCTTCTGAAAGCTTTAGACAGTAACAGTTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382451.6
ENST00000382452.6
CDS-3UTR GCA 90 bp GTTTTCACAAGTGCAAGGGGAGGGATTGTTCTCAGCCAACATTTACCAGTGATTAGGCCAGCTCGCGCCTaGCCTGCGCGCTGTGGTTGC +
Preference number: 4 (lower is better)
Translates to: VFTSARGGIVLSQHLPVIRPARA*PARCGC
Trigger: GCAACCACAGCGCGCAGGGCAGGCGCGAGCTGGCCT...AATCACTGGTAAATGTTGGCTGAGAACAATCCCTCCCCTTGCACTTGTGAAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382451.6
ENST00000382452.6
CDS-3UTR GCA 90 bp GTTCAACACAGAATTCCGGCTTTGCTGAACTGCAATGCATATTCCCTCTTCTCAGGGGCCGGCCCGCGCTaGGAATTACACCTCGCCGAG +
Preference number: 4 (lower is better)
Translates to: VQHRIPALLNCNAYSLFSGAGPR*ELHLAE
Trigger: CTCGGCGAGGTGTAATTCGCAGCGCGGGCCGGCCCC...TGAGAAGAGGGAATATGCATTGCAGTTCAGCAAAGCCGGAATTCTGTGTTGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR GCA 90 bp ACAAGGTGTGAGTCACACACTAGGGAGACAGACATCTGTTCAACACAGAATTCCGTGTCCCCGCCGGGGTaGACTGCCACAACTTCGGGC +
Preference number: 4 (lower is better)
Translates to: TRCESHTRETDICSTQNSVSPPG*TATTSG
Trigger: GCCCGAAGTTGTGGCAGTGCACCCCGGCGGGGACAC...GGAATTCTGTGTTGAACAGATGTCTGTCTCCCTAGTGTGTGACTCACACCTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR GCA 90 bp ACAAGGTGTGAGTCACACACTAGGGAGACAGACATCTGTTCAACACAGAATTCCGTCCACACCCCCAATTaGCACCGTGTCCCCGCCGGG +
Preference number: 4 (lower is better)
Translates to: TRCESHTRETDICSTQNSVHTPN*HRVPAG
Trigger: CCCGGCGGGGACACGGTGGCAATTGGGGGTGTGGAC...GGAATTCTGTGTTGAACAGATGTCTGTCTCCCTAGTGTGTGACTCACACCTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR GCA 90 bp CAGGCTAATCTCTTAAAGCGCTCAAAGTGTTTTCACAAGTGCAAGGGGAGGGATGTCCACACCCCCAATTaGCACCGTGTCCCCGCCGGG +
Preference number: 4 (lower is better)
Translates to: QANLLKRSKCFHKCKGRDVHTPN*HRVPAG
Trigger: CCCGGCGGGGACACGGTGGCAATTGGGGGTGTGGAC...ATCCCTCCCCTTGCACTTGTGAAAACACTTTGAGCGCTTTAAGAGATTAGCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR GCA 90 bp GGTGACCAGGACACCTCGGTCTGGCTAACAAGGGTTCTAAAAACTTGGACACGGTGGCCTCTAGGAGCTTaGCCTCATCCTTCAGCGTGG +
Preference number: 4 (lower is better)
Translates to: GDQDTSVWLTRVLKTWTRWPLGA*PHPSAW
Trigger: CCACGCTGAAGGATGAGGGCAAGCTCCTAGAGGCCA...CCGTGTCCAAGTTTTTAGAACCCTTGTTAGCCAGACCGAGGTGTCCTGGTCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CCA 90 bp TATCCAGGGGTTGTGTGTCCCCATCTGATCTGGAGGTGGCGCTCTGAAGGCAGCGAAGCAGAAAGCAAATaGGTGCTGTCGGGACTCCAA +
Preference number: 4 (lower is better)
Translates to: YPGVVCPHLIWRWRSEGSEAESK*VLSGLQ
Trigger: TTGGAGTCCCGACAGCACCCATTTGCTTTCTGCTTC...GCTGCCTTCAGAGCGCCACCTCCAGATCAGATGGGGACACACAACCCCTGGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CCA 90 bp GGGGGCATGGGGGCGCGTCACAGAAATAGAGAAATGACATGTTCCGCTGCAGTTCGTGCAGGGGCTTGCTaGGGTTGTTTCTGTCCAGAT +
Preference number: 4 (lower is better)
Translates to: GGMGARHRNREMTCSAAVRAGAC*GCFCPD
Trigger: ATCTGGACAGAAACAACCCCAGCAAGCCCCTGCACG...AACTGCAGCGGAACATGTCATTTCTCTATTTCTGTGACGCGCCCCCATGCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR TCA 90 bp GGTGACCAGGACACCTCGGTCTGGCTAACAAGGGTTCTAAAAACTTGGACACGGCCACGGAGTTCACGCTaGCGTCCCAAATCTTGGAAG +
Preference number: 4 (lower is better)
Translates to: GDQDTSVWLTRVLKTWTRPRSSR*RPKSWK
Trigger: CTTCCAAGATTTGGGACGTCAGCGTGAACTCCGTGG...CCGTGTCCAAGTTTTTAGAACCCTTGTTAGCCAGACCGAGGTGTCCTGGTCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR TCA 90 bp TCAGAAGAACGTGTACAGACACCCTGCAGAGACGAGGGTCATGACTGGGCCCTCTTCTGTCCAGATAGTTaGTGTACCCGGACAGGGAGA +
Preference number: 4 (lower is better)
Translates to: SEERVQTPCRDEGHDWALFCPDS*CTRTGR
Trigger: TCTCCCTGTCCGGGTACATCAACTATCTGGACAGAA...GAGGGCCCAGTCATGACCCTCGTCTCTGCAGGGTGTCTGTACACGTTCTTCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR TCA 90 bp GTTTTCACAAGTGCAAGGGGAGGGATTGTTCTCAGCCAACATTTACCAGTGATTGCCAGGCCAGGCTGCTaGCATGGTGCAGCCGGTGTG +
Preference number: 4 (lower is better)
Translates to: VFTSARGGIVLSQHLPVIARPGC*HGAAGV
Trigger: CACACCGGCTGCACCATGTCAGCAGCCTGGCCTGGC...AATCACTGGTAAATGTTGGCTGAGAACAATCCCTCCCCTTGCACTTGTGAAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR TCA 90 bp TCAGAAGAACGTGTACAGACACCCTGCAGAGACGAGGGTCATGACTGGGCCCTCTTAAACTCTAGTCCCTaGTTCGGTCCATCCAGAGGC +
Preference number: 4 (lower is better)
Translates to: SEERVQTPCRDEGHDWALLNSSP*FGPSRG
Trigger: GCCTCTGGATGGACCGAATCAGGGACTAGAGTTTAA...GAGGGCCCAGTCATGACCCTCGTCTCTGCAGGGTGTCTGTACACGTTCTTCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR TCA 90 bp TATTCCCTCTTCTCACTAGTACAGAAATGTTCTGCAGGCAGGAACATGAGCCCCCTGGAGGTGGCGCTCTaGAGGCAGCCACAAGGTGTG +
Preference number: 4 (lower is better)
Translates to: YSLFSLVQKCSAGRNMSPLEVAL*RQPQGV
Trigger: CACACCTTGTGGCTGCCTTCAGAGCGCCACCTCCAG...GGGGCTCATGTTCCTGCCTGCAGAACATTTCTGTACTAGTGAGAAGAGGGAATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR TCA 90 bp GGTGACCAGGACACCTCGGTCTGGCTAACAAGGGTTCTAAAAACTTGGACACGGATGATGGTGAAACGGTaGCCAGGACACCTCGGTCTG +
Preference number: 4 (lower is better)
Translates to: GDQDTSVWLTRVLKTWTRMMVKR*PGHLGL
Trigger: CAGACCGAGGTGTCCTGGTCACCGTTTCACCATCAT...CCGTGTCCAAGTTTTTAGAACCCTTGTTAGCCAGACCGAGGTGTCCTGGTCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR GCA 90 bp GTTTTCACAAGTGCAAGGGGAGGGATTGTTCTCAGCCAACATTTACCAGTGATTACGCCCCTCTCCACCTaGGGGAGGCTGGCGAACACC +
Preference number: 4 (lower is better)
Translates to: VFTSARGGIVLSQHLPVITPLST*GRLANT
Trigger: GGTGTTCGCCAGCCTCCCGCAGGTGGAGAGGGGCGT...AATCACTGGTAAATGTTGGCTGAGAACAATCCCTCCCCTTGCACTTGTGAAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR GCA 90 bp AACGGTGACCAGGACACCTCGGTCTGGCTAACAAGGGTTCTAAAAACTTGGACAAGCAGGTGGTCCTTCTaGCATAGGCAGCCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: NGDQDTSVWLTRVLKTWTSRWSF*HRQPSC
Trigger: GCAGCTGGGCTGCCTATGGCAGAAGGACCACCTGCT...TGTCCAAGTTTTTAGAACCCTTGTTAGCCAGACCGAGGTGTCCTGGTCACCGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR GCA 90 bp TCAGAAGAACGTGTACAGACACCCTGCAGAGACGAGGGTCATGACTGGGCCCTCTTGCCGCCGTTTTTATaGACCGTCAGACACTGGATC +
Preference number: 4 (lower is better)
Translates to: SEERVQTPCRDEGHDWALLPPFL*TVRHWI
Trigger: GATCCAGTGTCTGACGGTGCATAAAAACGGCGGCAA...GAGGGCCCAGTCATGACCCTCGTCTCTGCAGGGTGTCTGTACACGTTCTTCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR GCA 90 bp GCAAACTGTTACTGTCTAAAGCTTTCAGAAGAACGTGTACAGACACCCTGCAGAGTCCACACCCCCAATTaGCACCGTGTCCCCGCCGGG +
Preference number: 4 (lower is better)
Translates to: ANCYCLKLSEERVQTPCRVHTPN*HRVPAG
Trigger: CCCGGCGGGGACACGGTGGCAATTGGGGGTGTGGAC...TCTGCAGGGTGTCTGTACACGTTCTTCTGAAAGCTTTAGACAGTAACAGTTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR GCA 90 bp CAGGGGCTCTGTGTGCTTTGGAGGCTACTGCCTCTGGAATGTTTCGCATTCTCACGTGTACAGACACCCTaGAGAGACGAGGGTCATGAC +
Preference number: 4 (lower is better)
Translates to: QGLCVLWRLLPLECFAFSRVQTP*RDEGHD
Trigger: GTCATGACCCTCGTCTCTGCAGGGTGTCTGTACACG...TGAGAATGCGAAACATTCCAGAGGCAGTAGCCTCCAAAGCACACAGAGCCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CCA 90 bp TATTCCCTCTTCTCACTAGTACAGAAATGTTCTGCAGGCAGGAACATGAGCCCCCGCTGGGCGCATACTTaGCCACCACCACCTGATGGG +
Preference number: 4 (lower is better)
Translates to: YSLFSLVQKCSAGRNMSPRWAHT*PPPPDG
Trigger: CCCATCAGGTGGTGGTGGCCAAGTATGCGCCCAGCG...GGGGCTCATGTTCCTGCCTGCAGAACATTTCTGTACTAGTGAGAAGAGGGAATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CCA 90 bp GGGGGCATGGGGGCGCGTCACAGAAATAGAGAAATGACATGTTCCGCTGCAGTTCAATGTAGAATCCGCTaGGCGCATACTTGGCCACCA +
Preference number: 4 (lower is better)
Translates to: GGMGARHRNREMTCSAAVQCRIR*AHTWPP
Trigger: TGGTGGCCAAGTATGCGCCCAGCGGATTCTACATTG...AACTGCAGCGGAACATGTCATTTCTCTATTTCTGTGACGCGCCCCCATGCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CCA 90 bp GGGGGCATGGGGGCGCGTCACAGAAATAGAGAAATGACATGTTCCGCTGCAGTTCGTCAGCACTGGCTGTaGCAAATCTGTTCCCATCAG +
Preference number: 4 (lower is better)
Translates to: GGMGARHRNREMTCSAAVRQHWL*QICSHQ
Trigger: CTGATGGGAACAGATTTGCCACAGCCAGTGCTGACG...AACTGCAGCGGAACATGTCATTTCTCTATTTCTGTGACGCGCCCCCATGCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR CCA 90 bp GGGGGCATGGGGGCGCGTCACAGAAATAGAGAAATGACATGTTCCGCTGCAGTTGACGGCTACGCACTTTaGCTGAACGTCCAGTTTCAC +
Preference number: 4 (lower is better)
Translates to: GGMGARHRNREMTCSAAVDGYAL*LNVQFH
Trigger: GTGAAACTGGACGTTCAGCCAAAGTGCGTAGCCGTC...AACTGCAGCGGAACATGTCATTTCTCTATTTCTGTGACGCGCCCCCATGCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR CCA 90 bp TGTTTCGCATTCTCAAGGTTTGGTTGGGCTGTGGGTTTTAGTTATGCTCCACACCGGTCACGGGGCCCTTaGCCTCTAGGAGCTTGCCCT +
Preference number: 4 (lower is better)
Translates to: CFAFSRFGWAVGFSYAPHRSRGP*PLGACP
Trigger: AGGGCAAGCTCCTAGAGGCCAAGGGCCCCGTGACCG...GTGTGGAGCATAACTAAAACCCACAGCCCAACCAAACCTTGAGAATGCGAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CCA 90 bp CTAAAGCTTTCAGAAGAACGTGTACAGACACCCTGCAGAGACGAGGGTCATGACGCCAGGCTGCTGACATaGTGCAGCCGGTGTGCATCT +
Preference number: 4 (lower is better)
Translates to: LKLSEERVQTPCRDEGHDARLLT*CSRCAS
Trigger: AGATGCACACCGGCTGCACCATGTCAGCAGCCTGGC...GTCATGACCCTCGTCTCTGCAGGGTGTCTGTACACGTTCTTCTGAAAGCTTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR CCA 90 bp AACGGTGACCAGGACACCTCGGTCTGGCTAACAAGGGTTCTAAAAACTTGGACAATCCAGAGGCGGGGGTaGGGCTCCTCAGTAGGTGAT +
Preference number: 4 (lower is better)
Translates to: NGDQDTSVWLTRVLKTWTIQRRG*GSSVGD
Trigger: ATCACCTACTGAGGAGCCCCACCCCCGCCTCTGGAT...TGTCCAAGTTTTTAGAACCCTTGTTAGCCAGACCGAGGTGTCCTGGTCACCGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CCA 90 bp AACGGTGACCAGGACACCTCGGTCTGGCTAACAAGGGTTCTAAAAACTTGGACAGACGAGGGTCATGACTaGGCCCTCCTGCCTCTTGTG +
Preference number: 4 (lower is better)
Translates to: NGDQDTSVWLTRVLKTWTDEGHD*ALLPLV
Trigger: CACAAGAGGCAGGAGGGCCCAGTCATGACCCTCGTC...TGTCCAAGTTTTTAGAACCCTTGTTAGCCAGACCGAGGTGTCCTGGTCACCGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR TCA 90 bp CAGGCTAATCTCTTAAAGCGCTCAAAGTGTTTTCACAAGTGCAAGGGGAGGGATCGGACAGGGAGACACTaGGCAGGTGGTCCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: QANLLKRSKCFHKCKGRDRTGRH*AGGPSA
Trigger: GGCAGAAGGACCACCTGCTCAGTGTCTCCCTGTCCG...ATCCCTCCCCTTGCACTTGTGAAAACACTTTGAGCGCTTTAAGAGATTAGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR TCA 90 bp GGGGGCATGGGGGCGCGTCACAGAAATAGAGAAATGACATGTTCCGCTGCAGTTTTCTGTCCAGATAGTTaGTGTACCCGGACAGGGAGA +
Preference number: 4 (lower is better)
Translates to: GGMGARHRNREMTCSAAVFCPDS*CTRTGR
Trigger: TCTCCCTGTCCGGGTACATCAACTATCTGGACAGAA...AACTGCAGCGGAACATGTCATTTCTCTATTTCTGTGACGCGCCCCCATGCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR TCA 90 bp GGGCTGTGGGTTTTAGTTATGCTCCACACATTGTTTAGGTGCTCGCTTTATTTTGCCAGGCCAGGCTGCTaGCATGGTGCAGCCGGTGTG +
Preference number: 4 (lower is better)
Translates to: GLWVLVMLHTLFRCSLYFARPGC*HGAAGV
Trigger: CACACCGGCTGCACCATGTCAGCAGCCTGGCCTGGC...AAAATAAAGCGAGCACCTAAACAATGTGTGGAGCATAACTAAAACCCACAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR TCA 90 bp AGACACCCTGCAGAGACGAGGGTCATGACTGGGCCCTCCTGCCTCTTGTGGTGGACAGAAATAGAGAAATaGCATGTTCCGCTGCAGTTA +
Preference number: 4 (lower is better)
Translates to: RHPAETRVMTGPSCLLWWTEIEK*HVPLQL
Trigger: TAACTGCAGCGGAACATGTCATTTCTCTATTTCTGT...CCACCACAAGAGGCAGGAGGGCCCAGTCATGACCCTCGTCTCTGCAGGGTGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR TCA 90 bp TCTCAGGCTAATCTCTTAAAGCGCTCAAAGTGTTTTCACAAGTGCAAGGGGAGGCTGGAGGTGGCGCTCTaGAGGCAGCCACAAGGTGTG +
Preference number: 4 (lower is better)
Translates to: SQANLLKRSKCFHKCKGRLEVAL*RQPQGV
Trigger: CACACCTTGTGGCTGCCTTCAGAGCGCCACCTCCAG...CCTCCCCTTGCACTTGTGAAAACACTTTGAGCGCTTTAAGAGATTAGCCTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR TCA 90 bp CAGGGGCTCTGTGTGCTTTGGAGGCTACTGCCTCTGGAATGTTTCGCATTCTCAAGAATCGCACACAGTTaGCAAAGCGGCTGTGGTCGT +
Preference number: 4 (lower is better)
Translates to: QGLCVLWRLLPLECFAFSRIAHS*QSGCGR
Trigger: ACGACCACAGCCGCTTTGTCAACTGTGTGCGATTCT...TGAGAATGCGAAACATTCCAGAGGCAGTAGCCTCCAAAGCACACAGAGCCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382451.6
CDS-3UTR GCA 90 bp CTAAAGCTTTCAGAAGAACGTGTACAGACACCCTGCAGAGACGAGGGTCATGACCGGTATGGCCGGCTCTaGTTGATGTCCACGCTGTTG +
Preference number: 4 (lower is better)
Translates to: LKLSEERVQTPCRDEGHDRYGRL*LMSTLL
Trigger: CAACAGCGTGGACATCAAGCAGAGCCGGCCATACCG...GTCATGACCCTCGTCTCTGCAGGGTGTCTGTACACGTTCTTCTGAAAGCTTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382452.6
ENST00000499869.7
CDS-3UTR GCA 90 bp TCATGTGCAAACTGTTACTGTCTAAAGCTTTCAGAAGAACGTGTACAGACACCCCACCGTCGTGGGCCTTaGTTCCGCCCAGCGCGCACA +
Preference number: 4 (lower is better)
Translates to: SCANCYCLKLSEERVQTPHRRGP*FRPART
Trigger: TGTGCGCGCTGGGCGGAAGCAAGGCCCACGACGGTG...GGGTGTCTGTACACGTTCTTCTGAAAGCTTTAGACAGTAACAGTTTGCACATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR GCA 90 bp ATGTGCAAACTGTTACTGTCTAAAGCTTTCAGAAGAACGTGTACAGACACCCTGCACCGTCGTGGGCCTTaGTTCCGCCCAGCGCGCACA +
Preference number: 4 (lower is better)
Translates to: MCKLLLSKAFRRTCTDTLHRRGP*FRPART
Trigger: TGTGCGCGCTGGGCGGAAGCAAGGCCCACGACGGTG...CAGGGTGTCTGTACACGTTCTTCTGAAAGCTTTAGACAGTAACAGTTTGCACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR GCA 90 bp TGTCTAAAGCTTTCAGAAGAACGTGTACAGACACCCTGCAGAGACGAGGGTCATAGCAGGTGGTCCTTCTaGCATAGGCAGCCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: CLKLSEERVQTPCRDEGHSRWSF*HRQPSC
Trigger: GCAGCTGGGCTGCCTATGGCAGAAGGACCACCTGCT...ATGACCCTCGTCTCTGCAGGGTGTCTGTACACGTTCTTCTGAAAGCTTTAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR GCA 90 bp GGGGGCATGGGGGCGCGTCACAGAAATAGAGAAATGACATGTTCCGCTGCAGTTTTGCCGCCGTTTTTATaGACCGTCAGACACTGGATC +
Preference number: 4 (lower is better)
Translates to: GGMGARHRNREMTCSAAVLPPFL*TVRHWI
Trigger: GATCCAGTGTCTGACGGTGCATAAAAACGGCGGCAA...AACTGCAGCGGAACATGTCATTTCTCTATTTCTGTGACGCGCCCCCATGCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR GCA 90 bp TGTCTAAAGCTTTCAGAAGAACGTGTACAGACACCCTGCAGAGACGAGGGTCATCTGCAGCTGATGAGCTaGCCCGACTCATCCACGGTC +
Preference number: 4 (lower is better)
Translates to: CLKLSEERVQTPCRDEGHLQLMS*PDSSTV
Trigger: GACCGTGGATGAGTCGGGGCAGCTCATCAGCTGCAG...ATGACCCTCGTCTCTGCAGGGTGTCTGTACACGTTCTTCTGAAAGCTTTAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR GCA 90 bp AACGGTGACCAGGACACCTCGGTCTGGCTAACAAGGGTTCTAAAAACTTGGACATGGCCTCTAGGAGCTTaGCCTCATCCTTCAGCGTGG +
Preference number: 4 (lower is better)
Translates to: NGDQDTSVWLTRVLKTWTWPLGA*PHPSAW
Trigger: CCACGCTGAAGGATGAGGGCAAGCTCCTAGAGGCCA...TGTCCAAGTTTTTAGAACCCTTGTTAGCCAGACCGAGGTGTCCTGGTCACCGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR GCA 90 bp CTGTCTAAAGCTTTCAGAAGAACGTGTACAGACACCCTGCAGAGACGAGGGTCATGGCCTCTAGGAGCTTaGCCTCATCCTTCAGCGTGG +
Preference number: 4 (lower is better)
Translates to: LSKAFRRTCTDTLQRRGSWPLGA*PHPSAW
Trigger: CCACGCTGAAGGATGAGGGCAAGCTCCTAGAGGCCA...TGACCCTCGTCTCTGCAGGGTGTCTGTACACGTTCTTCTGAAAGCTTTAGACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR GCA 90 bp CTAAAGCTTTCAGAAGAACGTGTACAGACACCCTGCAGAGACGAGGGTCATGACAGGCTGCTGACATGGTaGAGCCGGTGTGCATCTTGG +
Preference number: 4 (lower is better)
Translates to: LKLSEERVQTPCRDEGHDRLLTW*SRCASW
Trigger: CCAAGATGCACACCGGCTGCACCATGTCAGCAGCCT...GTCATGACCCTCGTCTCTGCAGGGTGTCTGTACACGTTCTTCTGAAAGCTTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR GCA 90 bp CAGACACCCTGCAGAGACGAGGGTCATGACTGGGCCCTCCTGCCTCTTGTGGTGTTTGCTGAACTGCAATaGATATTCCCTCTTCTCACT +
Preference number: 4 (lower is better)
Translates to: QTPCRDEGHDWALLPLVVFAELQ*IFPLLT
Trigger: AGTGAGAAGAGGGAATATGCATTGCAGTTCAGCAAA...CACCACAAGAGGCAGGAGGGCCCAGTCATGACCCTCGTCTCTGCAGGGTGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CCA 90 bp TCTCAGGCTAATCTCTTAAAGCGCTCAAAGTGTTTTCACAAGTGCAAGGGGAGGTATCATCGCTTCCCGTaGCCAGCCGGTATGGCCGGC +
Preference number: 4 (lower is better)
Translates to: SQANLLKRSKCFHKCKGRYHRFP*PAGMAG
Trigger: GCCGGCCATACCGGCTGGCCACGGGAAGCGATGATA...CCTCCCCTTGCACTTGTGAAAACACTTTGAGCGCTTTAAGAGATTAGCCTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CCA 90 bp GGTGACCAGGACACCTCGGTCTGGCTAACAAGGGTTCTAAAAACTTGGACACGGGACGGCTACGCACTTTaGCTGAACGTCCAGTTTCAC +
Preference number: 4 (lower is better)
Translates to: GDQDTSVWLTRVLKTWTRDGYAL*LNVQFH
Trigger: GTGAAACTGGACGTTCAGCCAAAGTGCGTAGCCGTC...CCGTGTCCAAGTTTTTAGAACCCTTGTTAGCCAGACCGAGGTGTCCTGGTCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CCA 90 bp GGTGACCAGGACACCTCGGTCTGGCTAACAAGGGTTCTAAAAACTTGGACACGGCCTCATCCTTCAGCGTaGTGCCCAGGATGGAATACA +
Preference number: 4 (lower is better)
Translates to: GDQDTSVWLTRVLKTWTRPHPSA*CPGWNT
Trigger: TGTATTCCATCCTGGGCACCACGCTGAAGGATGAGG...CCGTGTCCAAGTTTTTAGAACCCTTGTTAGCCAGACCGAGGTGTCCTGGTCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CCA 90 bp GCAAACTGTTACTGTCTAAAGCTTTCAGAAGAACGTGTACAGACACCCTGCAGACGGTCACGGGGCCCTTaGCCTCTAGGAGCTTGCCCT +
Preference number: 4 (lower is better)
Translates to: ANCYCLKLSEERVQTPCRRSRGP*PLGACP
Trigger: AGGGCAAGCTCCTAGAGGCCAAGGGCCCCGTGACCG...TCTGCAGGGTGTCTGTACACGTTCTTCTGAAAGCTTTAGACAGTAACAGTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR CCA 90 bp TGTCTAAAGCTTTCAGAAGAACGTGTACAGACACCCTGCAGAGACGAGGGTCATATCCAGAGGCGGGGGTaGGGCTCCTCAGTAGGTGAT +
Preference number: 4 (lower is better)
Translates to: CLKLSEERVQTPCRDEGHIQRRG*GSSVGD
Trigger: ATCACCTACTGAGGAGCCCCACCCCCGCCTCTGGAT...ATGACCCTCGTCTCTGCAGGGTGTCTGTACACGTTCTTCTGAAAGCTTTAGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR CCA 90 bp TGTCTAAAGCTTTCAGAAGAACGTGTACAGACACCCTGCAGAGACGAGGGTCATGACGAGGGTCATGACTaGGCCCTCCTGCCTCTTGTG +
Preference number: 4 (lower is better)
Translates to: CLKLSEERVQTPCRDEGHDEGHD*ALLPLV
Trigger: CACAAGAGGCAGGAGGGCCCAGTCATGACCCTCGTC...ATGACCCTCGTCTCTGCAGGGTGTCTGTACACGTTCTTCTGAAAGCTTTAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR CCA 90 bp AACGGTGACCAGGACACCTCGGTCTGGCTAACAAGGGTTCTAAAAACTTGGACATGTCCCCATCTGATCTaGAGGTGGCGCTCTGAAGGC +
Preference number: 4 (lower is better)
Translates to: NGDQDTSVWLTRVLKTWTCPHLI*RWRSEG
Trigger: GCCTTCAGAGCGCCACCTCCAGATCAGATGGGGACA...TGTCCAAGTTTTTAGAACCCTTGTTAGCCAGACCGAGGTGTCCTGGTCACCGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR TCA 90 bp CTGTCTAAAGCTTTCAGAAGAACGTGTACAGACACCCTGCAGAGACGAGGGTCACGGGGTTGTCGATGCTaGAGCACTTCCTCTGATCCT +
Preference number: 4 (lower is better)
Translates to: LSKAFRRTCTDTLQRRGSRGCRC*STSSDP
Trigger: AGGATCAGAGGAAGTGCTTCAGCATCGACAACCCCG...TGACCCTCGTCTCTGCAGGGTGTCTGTACACGTTCTTCTGAAAGCTTTAGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR TCA 90 bp CTAAAGCTTTCAGAAGAACGTGTACAGACACCCTGCAGAGACGAGGGTCATGACCGGGGTTGTCGATGCTaGAGCACTTCCTCTGATCCT +
Preference number: 4 (lower is better)
Translates to: LKLSEERVQTPCRDEGHDRGCRC*STSSDP
Trigger: AGGATCAGAGGAAGTGCTTCAGCATCGACAACCCCG...GTCATGACCCTCGTCTCTGCAGGGTGTCTGTACACGTTCTTCTGAAAGCTTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR TCA 90 bp TATTCCCTCTTCTCACTAGTACAGAAATGTTCTGCAGGCAGGAACATGAGCCCCCTGTACAACCTCCCCTaGCAGATAGTGAGAGCCGCG +
Preference number: 4 (lower is better)
Translates to: YSLFSLVQKCSAGRNMSPLYNLP*QIVRAA
Trigger: CGCGGCTCTCACTATCTGTCAGGGGAGGTTGTACAG...GGGGCTCATGTTCCTGCCTGCAGAACATTTCTGTACTAGTGAGAAGAGGGAATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR TCA 90 bp AGACACCCTGCAGAGACGAGGGTCATGACTGGGCCCTCCTGCCTCTTGTGGTGGCTAGTTTGTAAACACTaGCAGGCAACAGTTAAGATA +
Preference number: 4 (lower is better)
Translates to: RHPAETRVMTGPSCLLWWLVCKH*QATVKI
Trigger: TATCTTAACTGTTGCCTGTCAGTGTTTACAAACTAG...CCACCACAAGAGGCAGGAGGGCCCAGTCATGACCCTCGTCTCTGCAGGGTGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR TCA 90 bp TATCCAGGGGTTGTGTGTCCCCATCTGATCTGGAGGTGGCGCTCTGAAGGCAGCATTAACCTTTGCTCTTaGGAGCAGAAGAGGGAAAGA +
Preference number: 4 (lower is better)
Translates to: YPGVVCPHLIWRWRSEGSINLCS*EQKRER
Trigger: TCTTTCCCTCTTCTGCTCTCAAGAGCAAAGGTTAAT...GCTGCCTTCAGAGCGCCACCTCCAGATCAGATGGGGACACACAACCCCTGGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR TCA 90 bp TCAGAAGAACGTGTACAGACACCCTGCAGAGACGAGGGTCATGACTGGGCCCTCGCCAACATTTACCAGTaGTTCCGACACACGCAAAAA +
Preference number: 4 (lower is better)
Translates to: SEERVQTPCRDEGHDWALANIYQ*FRHTQK
Trigger: TTTTTGCGTGTGTCGGAATCACTGGTAAATGTTGGC...GAGGGCCCAGTCATGACCCTCGTCTCTGCAGGGTGTCTGTACACGTTCTTCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR GCA 90 bp ATGCTCCACACATTGTTTAGGTGCTCGCTTTATTTTTCATGTGCAAACTGTTACGGGGCCGGCCCGCGCTaGGAATTACACCTCGCCGAG +
Preference number: 4 (lower is better)
Translates to: MLHTLFRCSLYFSCANCYGAGPR*ELHLAE
Trigger: CTCGGCGAGGTGTAATTCGCAGCGCGGGCCGGCCCC...GTAACAGTTTGCACATGAAAAATAAAGCGAGCACCTAAACAATGTGTGGAGCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR GCA 90 bp TCTCAGGCTAATCTCTTAAAGCGCTCAAAGTGTTTTCACAAGTGCAAGGGGAGGCATAGGCAGCCCAGCTaGTGGTCCAGAACCGTGGAG +
Preference number: 4 (lower is better)
Translates to: SQANLLKRSKCFHKCKGRHRQPS*WSRTVE
Trigger: CTCCACGGTTCTGGACCAGCAGCTGGGCTGCCTATG...CCTCCCCTTGCACTTGTGAAAACACTTTGAGCGCTTTAAGAGATTAGCCTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR GCA 90 bp CAGGGGCTCTGTGTGCTTTGGAGGCTACTGCCTCTGGAATGTTTCGCATTCTCATTGCCGCCGTTTTTATaGACCGTCAGACACTGGATC +
Preference number: 4 (lower is better)
Translates to: QGLCVLWRLLPLECFAFSLPPFL*TVRHWI
Trigger: GATCCAGTGTCTGACGGTGCATAAAAACGGCGGCAA...TGAGAATGCGAAACATTCCAGAGGCAGTAGCCTCCAAAGCACACAGAGCCCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR GCA 90 bp TCATGTGCAAACTGTTACTGTCTAAAGCTTTCAGAAGAACGTGTACAGACACCCCCCGCCGGGGTGCACTaGCACAACTTCGGGCTCGTA +
Preference number: 4 (lower is better)
Translates to: SCANCYCLKLSEERVQTPPAGVH*HNFGLV
Trigger: TACGAGCCCGAAGTTGTGGCAGTGCACCCCGGCGGG...GGGTGTCTGTACACGTTCTTCTGAAAGCTTTAGACAGTAACAGTTTGCACATGA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR GCA 90 bp CTAAAGCTTTCAGAAGAACGTGTACAGACACCCTGCAGAGACGAGGGTCATGACCATCCTTCAGCGTGGTaGCCAGGATGGAATACAGGC +
Preference number: 4 (lower is better)
Translates to: LKLSEERVQTPCRDEGHDHPSAW*PGWNTG
Trigger: GCCTGTATTCCATCCTGGGCACCACGCTGAAGGATG...GTCATGACCCTCGTCTCTGCAGGGTGTCTGTACACGTTCTTCTGAAAGCTTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR GCA 90 bp CTGTCTAAAGCTTTCAGAAGAACGTGTACAGACACCCTGCAGAGACGAGGGTCACATCCTTCAGCGTGGTaGCCAGGATGGAATACAGGC +
Preference number: 4 (lower is better)
Translates to: LSKAFRRTCTDTLQRRGSHPSAW*PGWNTG
Trigger: GCCTGTATTCCATCCTGGGCACCACGCTGAAGGATG...TGACCCTCGTCTCTGCAGGGTGTCTGTACACGTTCTTCTGAAAGCTTTAGACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR GCA 90 bp ATGTGCAAACTGTTACTGTCTAAAGCTTTCAGAAGAACGTGTACAGACACCCTGGTCGTGACCAGCGTGTaGTCGTCCAGCCAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: MCKLLLSKAFRRTCTDTLVVTSV*SSSQAR
Trigger: CCTGGCCTGGCTGGACGAGCACACGCTGGTCACGAC...CAGGGTGTCTGTACACGTTCTTCTGAAAGCTTTAGACAGTAACAGTTTGCACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR GCA 90 bp CTGTCTAAAGCTTTCAGAAGAACGTGTACAGACACCCTGCAGAGACGAGGGTCACGTGTACAGACACCCTaGAGAGACGAGGGTCATGAC +
Preference number: 4 (lower is better)
Translates to: LSKAFRRTCTDTLQRRGSRVQTP*RDEGHD
Trigger: GTCATGACCCTCGTCTCTGCAGGGTGTCTGTACACG...TGACCCTCGTCTCTGCAGGGTGTCTGTACACGTTCTTCTGAAAGCTTTAGACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR CCA 90 bp TCATGTGCAAACTGTTACTGTCTAAAGCTTTCAGAAGAACGTGTACAGACACCCAGGCAGCCCAGCTGCTaGTCCAGAACCGTGGAGCCC +
Preference number: 4 (lower is better)
Translates to: SCANCYCLKLSEERVQTPRQPSC*SRTVEP
Trigger: GGGCTCCACGGTTCTGGACCAGCAGCTGGGCTGCCT...GGGTGTCTGTACACGTTCTTCTGAAAGCTTTAGACAGTAACAGTTTGCACATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR CCA 90 bp CTAAAGCTTTCAGAAGAACGTGTACAGACACCCTGCAGAGACGAGGGTCATGACCGTGCAGGGGCTTGCTaGGGTTGTTTCTGTCCAGAT +
Preference number: 4 (lower is better)
Translates to: LKLSEERVQTPCRDEGHDRAGAC*GCFCPD
Trigger: ATCTGGACAGAAACAACCCCAGCAAGCCCCTGCACG...GTCATGACCCTCGTCTCTGCAGGGTGTCTGTACACGTTCTTCTGAAAGCTTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR CCA 90 bp CTGTCTAAAGCTTTCAGAAGAACGTGTACAGACACCCTGCAGAGACGAGGGTCAGTCATCCTGGACACCTaGTTCGTGTGGCCTTTCCCA +
Preference number: 4 (lower is better)
Translates to: LSKAFRRTCTDTLQRRGSVILDT*FVWPFP
Trigger: TGGGAAAGGCCACACGAACCAGGTGTCCAGGATGAC...TGACCCTCGTCTCTGCAGGGTGTCTGTACACGTTCTTCTGAAAGCTTTAGACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR CCA 90 bp TGTCTAAAGCTTTCAGAAGAACGTGTACAGACACCCTGCAGAGACGAGGGTCATCATCCACGGTCATCCTaGACACCTGGTTCGTGTGGC +
Preference number: 4 (lower is better)
Translates to: CLKLSEERVQTPCRDEGHHPRSS*TPGSCG
Trigger: GCCACACGAACCAGGTGTCCAGGATGACCGTGGATG...ATGACCCTCGTCTCTGCAGGGTGTCTGTACACGTTCTTCTGAAAGCTTTAGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR CCA 90 bp CAGGCTAATCTCTTAAAGCGCTCAAAGTGTTTTCACAAGTGCAAGGGGAGGGATGCGTGGTGCCCAGGATaGAATACAGGCGGACGTTGC +
Preference number: 4 (lower is better)
Translates to: QANLLKRSKCFHKCKGRDAWCPG*NTGGRC
Trigger: GCAACGTCCGCCTGTATTCCATCCTGGGCACCACGC...ATCCCTCCCCTTGCACTTGTGAAAACACTTTGAGCGCTTTAAGAGATTAGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CCA 90 bp ACAAGGTGTGAGTCACACACTAGGGAGACAGACATCTGTTCAACACAGAATTCCGCCAGGCTGCTGACATaGTGCAGCCGGTGTGCATCT +
Preference number: 4 (lower is better)
Translates to: TRCESHTRETDICSTQNSARLLT*CSRCAS
Trigger: AGATGCACACCGGCTGCACCATGTCAGCAGCCTGGC...GGAATTCTGTGTTGAACAGATGTCTGTCTCCCTAGTGTGTGACTCACACCTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CCA 90 bp CAGGCTAATCTCTTAAAGCGCTCAAAGTGTTTTCACAAGTGCAAGGGGAGGGATATCCAGAGGCGGGGGTaGGGCTCCTCAGTAGGTGAT +
Preference number: 4 (lower is better)
Translates to: QANLLKRSKCFHKCKGRDIQRRG*GSSVGD
Trigger: ATCACCTACTGAGGAGCCCCACCCCCGCCTCTGGAT...ATCCCTCCCCTTGCACTTGTGAAAACACTTTGAGCGCTTTAAGAGATTAGCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CCA 90 bp TGTTTCGCATTCTCAAGGTTTGGTTGGGCTGTGGGTTTTAGTTATGCTCCACACGACGAGGGTCATGACTaGGCCCTCCTGCCTCTTGTG +
Preference number: 4 (lower is better)
Translates to: CFAFSRFGWAVGFSYAPHDEGHD*ALLPLV
Trigger: CACAAGAGGCAGGAGGGCCCAGTCATGACCCTCGTC...GTGTGGAGCATAACTAAAACCCACAGCCCAACCAAACCTTGAGAATGCGAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CCA 90 bp CAGGGGCTCTGTGTGCTTTGGAGGCTACTGCCTCTGGAATGTTTCGCATTCTCAAGGGTTCTAAAAACTTaGACACGGTGCCGTCAACGC +
Preference number: 4 (lower is better)
Translates to: QGLCVLWRLLPLECFAFSRVLKT*TRCRQR
Trigger: GCGTTGACGGCACCGTGTCCAAGTTTTTAGAACCCT...TGAGAATGCGAAACATTCCAGAGGCAGTAGCCTCCAAAGCACACAGAGCCCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR TCA 90 bp TGTCTAAAGCTTTCAGAAGAACGTGTACAGACACCCTGCAGAGACGAGGGTCATAGAATCGCACACAGTTaGCAAAGCGGCTGTGGTCGC +
Preference number: 4 (lower is better)
Translates to: CLKLSEERVQTPCRDEGHRIAHS*QSGCGR
Trigger: GCGACCACAGCCGCTTTGTCAACTGTGTGCGATTCT...ATGACCCTCGTCTCTGCAGGGTGTCTGTACACGTTCTTCTGAAAGCTTTAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382452.6
ENST00000499869.7
CDS-3UTR TCA 90 bp GGGCTGTGGGTTTTAGTTATGCTCCACACATTGTTTAGGTGCTCGCTTTATTTTCGGACAGGGAGACACTaGGCAGGTGGTCCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: GLWVLVMLHTLFRCSLYFRTGRH*AGGPSA
Trigger: GGCAGAAGGACCACCTGCTCAGTGTCTCCCTGTCCG...AAAATAAAGCGAGCACCTAAACAATGTGTGGAGCATAACTAAAACCCACAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR TCA 90 bp ATGTGCAAACTGTTACTGTCTAAAGCTTTCAGAAGAACGTGTACAGACACCCTGTGTAGTCCCGCAGCATaGGGCTGGTGTACCGCACGG +
Preference number: 4 (lower is better)
Translates to: MCKLLLSKAFRRTCTDTLCSPAA*GWCTAR
Trigger: CCGTGCGGTACACCAGCCTCATGCTGCGGGACTACA...CAGGGTGTCTGTACACGTTCTTCTGAAAGCTTTAGACAGTAACAGTTTGCACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR TCA 90 bp AACGGTGACCAGGACACCTCGGTCTGGCTAACAAGGGTTCTAAAAACTTGGACAGTGCATCTTGGATCTTaGCTCTGGTTTCCGGGTCAC +
Preference number: 4 (lower is better)
Translates to: NGDQDTSVWLTRVLKTWTVHLGS*LWFPGH
Trigger: GTGACCCGGAAACCAGAGTCAAGATCCAAGATGCAC...TGTCCAAGTTTTTAGAACCCTTGTTAGCCAGACCGAGGTGTCCTGGTCACCGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR TCA 90 bp GCAAACTGTTACTGTCTAAAGCTTTCAGAAGAACGTGTACAGACACCCTGCAGACATCATGGGAGGTCGTaGCCAGCGTGTGCTCGTCCA +
Preference number: 4 (lower is better)
Translates to: ANCYCLKLSEERVQTPCRHHGRS*PACARP
Trigger: TGGACGAGCACACGCTGGTCACGACCTCCCATGATG...TCTGCAGGGTGTCTGTACACGTTCTTCTGAAAGCTTTAGACAGTAACAGTTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR GCA 90 bp CTGTCTAAAGCTTTCAGAAGAACGTGTACAGACACCCTGCAGAGACGAGGGTCAGGGTCCCTCAAAGAATaGCGCGCAGTTATCATCGCT +
Preference number: 4 (lower is better)
Translates to: LSKAFRRTCTDTLQRRGSGSLKE*RAVIIA
Trigger: AGCGATGATAACTGCGCGGCATTCTTTGAGGGACCC...TGACCCTCGTCTCTGCAGGGTGTCTGTACACGTTCTTCTGAAAGCTTTAGACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382452.6
ENST00000499869.7
CDS-3UTR GCA 90 bp ACACGCAAAAACACTCCCAATCACGGTGCTTTATACTTACTTTTAATTTCTGCAAGGCCAGCTCGCGCCTaGCCTGCGCGCTGTGGTTGC +
Preference number: 4 (lower is better)
Translates to: TRKNTPNHGALYLLLISARPARA*PARCGC
Trigger: GCAACCACAGCGCGCAGGGCAGGCGCGAGCTGGCCT...TGCAGAAATTAAAAGTAAGTATAAAGCACCGTGATTGGGAGTGTTTTTGCGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382451.6
ENST00000382452.6
CDS-3UTR GCA 90 bp CACACGCAAAAACACTCCCAATCACGGTGCTTTATACTTACTTTTAATTTCTGCACGCCCCTCTCCACCTaGGGGAGGCTGGCGAACACC +
Preference number: 4 (lower is better)
Translates to: HTQKHSQSRCFILTFNFCTPLST*GRLANT
Trigger: GGTGTTCGCCAGCCTCCCGCAGGTGGAGAGGGGCGT...GCAGAAATTAAAAGTAAGTATAAAGCACCGTGATTGGGAGTGTTTTTGCGTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR GCA 90 bp GTTCAACACAGAATTCCGGCTTTGCTGAACTGCAATGCATATTCCCTCTTCTCACATAGGCAGCCCAGCTaGTGGTCCAGAACCGTGGAG +
Preference number: 4 (lower is better)
Translates to: VQHRIPALLNCNAYSLFSHRQPS*WSRTVE
Trigger: CTCCACGGTTCTGGACCAGCAGCTGGGCTGCCTATG...TGAGAAGAGGGAATATGCATTGCAGTTCAGCAAAGCCGGAATTCTGTGTTGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR GCA 90 bp TGTTTCGCATTCTCAAGGTTTGGTTGGGCTGTGGGTTTTAGTTATGCTCCACACAGGCTGCTGACATGGTaGAGCCGGTGTGCATCTTGG +
Preference number: 4 (lower is better)
Translates to: CFAFSRFGWAVGFSYAPHRLLTW*SRCASW
Trigger: CCAAGATGCACACCGGCTGCACCATGTCAGCAGCCT...GTGTGGAGCATAACTAAAACCCACAGCCCAACCAAACCTTGAGAATGCGAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR GCA 90 bp TCTCAGGCTAATCTCTTAAAGCGCTCAAAGTGTTTTCACAAGTGCAAGGGGAGGAGGCTGCTGACATGGTaGAGCCGGTGTGCATCTTGG +
Preference number: 4 (lower is better)
Translates to: SQANLLKRSKCFHKCKGRRLLTW*SRCASW
Trigger: CCAAGATGCACACCGGCTGCACCATGTCAGCAGCCT...CCTCCCCTTGCACTTGTGAAAACACTTTGAGCGCTTTAAGAGATTAGCCTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CCA 90 bp TCATGTGCAAACTGTTACTGTCTAAAGCTTTCAGAAGAACGTGTACAGACACCCCGCTGGGCGCATACTTaGCCACCACCACCTGATGGG +
Preference number: 4 (lower is better)
Translates to: SCANCYCLKLSEERVQTPRWAHT*PPPPDG
Trigger: CCCATCAGGTGGTGGTGGCCAAGTATGCGCCCAGCG...GGGTGTCTGTACACGTTCTTCTGAAAGCTTTAGACAGTAACAGTTTGCACATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CCA 90 bp ACAAGGTGTGAGTCACACACTAGGGAGACAGACATCTGTTCAACACAGAATTCCGCTGGTCCAGAACCGTaGAGCCCATGGGAAATGTGC +
Preference number: 4 (lower is better)
Translates to: TRCESHTRETDICSTQNSAGPEP*SPWEMC
Trigger: GCACATTTCCCATGGGCTCCACGGTTCTGGACCAGC...GGAATTCTGTGTTGAACAGATGTCTGTCTCCCTAGTGTGTGACTCACACCTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CCA 90 bp TATTCCCTCTTCTCACTAGTACAGAAATGTTCTGCAGGCAGGAACATGAGCCCCGAGACACTGAGCAGGTaGTCCTTCTGCCATAGGCAG +
Preference number: 4 (lower is better)
Translates to: YSLFSLVQKCSAGRNMSPETLSR*SFCHRQ
Trigger: CTGCCTATGGCAGAAGGACCACCTGCTCAGTGTCTC...GGGGCTCATGTTCCTGCCTGCAGAACATTTCTGTACTAGTGAGAAGAGGGAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CCA 90 bp TGTTTCGCATTCTCAAGGTTTGGTTGGGCTGTGGGTTTTAGTTATGCTCCACACGACACCTGGTTCGTGTaGCCTTTCCCAGCGAAGGAG +
Preference number: 4 (lower is better)
Translates to: CFAFSRFGWAVGFSYAPHDTWFV*PFPAKE
Trigger: CTCCTTCGCTGGGAAAGGCCACACGAACCAGGTGTC...GTGTGGAGCATAACTAAAACCCACAGCCCAACCAAACCTTGAGAATGCGAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CCA 90 bp GCAAACTGTTACTGTCTAAAGCTTTCAGAAGAACGTGTACAGACACCCTGCAGAGCGTGGTGCCCAGGATaGAATACAGGCGGACGTTGC +
Preference number: 4 (lower is better)
Translates to: ANCYCLKLSEERVQTPCRAWCPG*NTGGRC
Trigger: GCAACGTCCGCCTGTATTCCATCCTGGGCACCACGC...TCTGCAGGGTGTCTGTACACGTTCTTCTGAAAGCTTTAGACAGTAACAGTTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR CCA 90 bp CTAAAGCTTTCAGAAGAACGTGTACAGACACCCTGCAGAGACGAGGGTCATGACCCTCATCCTTCAGCGTaGTGCCCAGGATGGAATACA +
Preference number: 4 (lower is better)
Translates to: LKLSEERVQTPCRDEGHDPHPSA*CPGWNT
Trigger: TGTATTCCATCCTGGGCACCACGCTGAAGGATGAGG...GTCATGACCCTCGTCTCTGCAGGGTGTCTGTACACGTTCTTCTGAAAGCTTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR CCA 90 bp CAGGCTAATCTCTTAAAGCGCTCAAAGTGTTTTCACAAGTGCAAGGGGAGGGATCATCTGATCTGGAGGTaGCGCTCTGAAGGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: QANLLKRSKCFHKCKGRDHLIWR*RSEGSH
Trigger: GTGGCTGCCTTCAGAGCGCCACCTCCAGATCAGATG...ATCCCTCCCCTTGCACTTGTGAAAACACTTTGAGCGCTTTAAGAGATTAGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CCA 90 bp GGTGACCAGGACACCTCGGTCTGGCTAACAAGGGTTCTAAAAACTTGGACACGGCAGGACACCTCGGTCTaGCTAACAAGGGTTCTAAAA +
Preference number: 4 (lower is better)
Translates to: GDQDTSVWLTRVLKTWTRQDTSV*LTRVLK
Trigger: TTTTAGAACCCTTGTTAGCCAGACCGAGGTGTCCTG...CCGTGTCCAAGTTTTTAGAACCCTTGTTAGCCAGACCGAGGTGTCCTGGTCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR TCA 90 bp AACGGTGACCAGGACACCTCGGTCTGGCTAACAAGGGTTCTAAAAACTTGGACAGCTACGCACTTTGGCTaGACGTCCAGTTTCACAACT +
Preference number: 4 (lower is better)
Translates to: NGDQDTSVWLTRVLKTWTATHFG*TSSFTT
Trigger: AGTTGTGAAACTGGACGTTCAGCCAAAGTGCGTAGC...TGTCCAAGTTTTTAGAACCCTTGTTAGCCAGACCGAGGTGTCCTGGTCACCGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR TCA 90 bp CTAAAGCTTTCAGAAGAACGTGTACAGACACCCTGCAGAGACGAGGGTCATGACCTGAAGCACTTCCTCTaGTCCTTCAGCAGGACAATC +
Preference number: 4 (lower is better)
Translates to: LKLSEERVQTPCRDEGHDLKHFL*SFSRTI
Trigger: GATTGTCCTGCTGAAGGATCAGAGGAAGTGCTTCAG...GTCATGACCCTCGTCTCTGCAGGGTGTCTGTACACGTTCTTCTGAAAGCTTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR TCA 90 bp TGTCTAAAGCTTTCAGAAGAACGTGTACAGACACCCTGCAGAGACGAGGGTCATGTGCATCTTGGATCTTaGCTCTGGTTTCCGGGTCAC +
Preference number: 4 (lower is better)
Translates to: CLKLSEERVQTPCRDEGHVHLGS*LWFPGH
Trigger: GTGACCCGGAAACCAGAGTCAAGATCCAAGATGCAC...ATGACCCTCGTCTCTGCAGGGTGTCTGTACACGTTCTTCTGAAAGCTTTAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR TCA 90 bp TTATGCTCCACACATTGTTTAGGTGCTCGCTTTATTTTTCATGTGCAAACTGTTGCCAGGCCAGGCTGCTaGCATGGTGCAGCCGGTGTG +
Preference number: 4 (lower is better)
Translates to: LCSTHCLGARFIFHVQTVARPGC*HGAAGV
Trigger: CACACCGGCTGCACCATGTCAGCAGCCTGGCCTGGC...AACAGTTTGCACATGAAAAATAAAGCGAGCACCTAAACAATGTGTGGAGCATAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR TCA 90 bp TCATGTGCAAACTGTTACTGTCTAAAGCTTTCAGAAGAACGTGTACAGACACCCCATCATGGGAGGTCGTaGCCAGCGTGTGCTCGTCCA +
Preference number: 4 (lower is better)
Translates to: SCANCYCLKLSEERVQTPHHGRS*PACARP
Trigger: TGGACGAGCACACGCTGGTCACGACCTCCCATGATG...GGGTGTCTGTACACGTTCTTCTGAAAGCTTTAGACAGTAACAGTTTGCACATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR TCA 90 bp ATGTGCAAACTGTTACTGTCTAAAGCTTTCAGAAGAACGTGTACAGACACCCTGCATCATGGGAGGTCGTaGCCAGCGTGTGCTCGTCCA +
Preference number: 4 (lower is better)
Translates to: MCKLLLSKAFRRTCTDTLHHGRS*PACARP
Trigger: TGGACGAGCACACGCTGGTCACGACCTCCCATGATG...CAGGGTGTCTGTACACGTTCTTCTGAAAGCTTTAGACAGTAACAGTTTGCACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR TCA 90 bp TCAGAAGAACGTGTACAGACACCCTGCAGAGACGAGGGTCATGACTGGGCCCTCACAGAAATAGAGAAATaGCATGTTCCGCTGCAGTTA +
Preference number: 4 (lower is better)
Translates to: SEERVQTPCRDEGHDWALTEIEK*HVPLQL
Trigger: TAACTGCAGCGGAACATGTCATTTCTCTATTTCTGT...GAGGGCCCAGTCATGACCCTCGTCTCTGCAGGGTGTCTGTACACGTTCTTCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR TCA 90 bp GCAAACTGTTACTGTCTAAAGCTTTCAGAAGAACGTGTACAGACACCCTGCAGATTGTGTGTCCCCATCTaGTCTGGAGGTGGCGCTCTG +
Preference number: 4 (lower is better)
Translates to: ANCYCLKLSEERVQTPCRLCVPI*SGGGAL
Trigger: CAGAGCGCCACCTCCAGATCAGATGGGGACACACAA...TCTGCAGGGTGTCTGTACACGTTCTTCTGAAAGCTTTAGACAGTAACAGTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR TCA 90 bp CAGGGGCTCTGTGTGCTTTGGAGGCTACTGCCTCTGGAATGTTTCGCATTCTCAGCCAACATTTACCAGTaGTTCCGACACACGCAAAAA +
Preference number: 4 (lower is better)
Translates to: QGLCVLWRLLPLECFAFSANIYQ*FRHTQK
Trigger: TTTTTGCGTGTGTCGGAATCACTGGTAAATGTTGGC...TGAGAATGCGAAACATTCCAGAGGCAGTAGCCTCCAAAGCACACAGAGCCCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR TCA 90 bp TGTCTAAAGCTTTCAGAAGAACGTGTACAGACACCCTGCAGAGACGAGGGTCATAGAATCGCACACAGTTaGCAAAGCGGCTGTGGTCGT +
Preference number: 4 (lower is better)
Translates to: CLKLSEERVQTPCRDEGHRIAHS*QSGCGR
Trigger: ACGACCACAGCCGCTTTGTCAACTGTGTGCGATTCT...ATGACCCTCGTCTCTGCAGGGTGTCTGTACACGTTCTTCTGAAAGCTTTAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382451.6
ENST00000502702.5
CDS-3UTR GCA 90 bp GCAAACTGTTACTGTCTAAAGCTTTCAGAAGAACGTGTACAGACACCCTGCAGACGGTATGGCCGGCTCTaGTTGATGTCCACGCTGTTG +
Preference number: 4 (lower is better)
Translates to: ANCYCLKLSEERVQTPCRRYGRL*LMSTLL
Trigger: CAACAGCGTGGACATCAAGCAGAGCCGGCCATACCG...TCTGCAGGGTGTCTGTACACGTTCTTCTGAAAGCTTTAGACAGTAACAGTTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382452.6
ENST00000499869.7
CDS-3UTR GCA 90 bp ACACGCAAAAACACTCCCAATCACGGTGCTTTATACTTACTTTTAATTTCTGCACACCGTCGTGGGCCTTaGTTCCGCCCAGCGCGCACA +
Preference number: 4 (lower is better)
Translates to: TRKNTPNHGALYLLLISAHRRGP*FRPART
Trigger: TGTGCGCGCTGGGCGGAAGCAAGGCCCACGACGGTG...TGCAGAAATTAAAAGTAAGTATAAAGCACCGTGATTGGGAGTGTTTTTGCGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR GCA 90 bp TCATGTGCAAACTGTTACTGTCTAAAGCTTTCAGAAGAACGTGTACAGACACCCCATAGGCAGCCCAGCTaGTGGTCCAGAACCGTGGAG +
Preference number: 4 (lower is better)
Translates to: SCANCYCLKLSEERVQTPHRQPS*WSRTVE
Trigger: CTCCACGGTTCTGGACCAGCAGCTGGGCTGCCTATG...GGGTGTCTGTACACGTTCTTCTGAAAGCTTTAGACAGTAACAGTTTGCACATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR GCA 90 bp ATGTGCAAACTGTTACTGTCTAAAGCTTTCAGAAGAACGTGTACAGACACCCTGAGCAGGTGGTCCTTCTaGCATAGGCAGCCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: MCKLLLSKAFRRTCTDTLSRWSF*HRQPSC
Trigger: GCAGCTGGGCTGCCTATGGCAGAAGGACCACCTGCT...CAGGGTGTCTGTACACGTTCTTCTGAAAGCTTTAGACAGTAACAGTTTGCACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR GCA 90 bp TGTCTAAAGCTTTCAGAAGAACGTGTACAGACACCCTGCAGAGACGAGGGTCATGGACAATCTGTCCAATaGACACGACCACGGCGTATC +
Preference number: 4 (lower is better)
Translates to: CLKLSEERVQTPCRDEGHGQSVQ*TRPRRI
Trigger: GATACGCCGTGGTCGTGTGCATTGGACAGATTGTCC...ATGACCCTCGTCTCTGCAGGGTGTCTGTACACGTTCTTCTGAAAGCTTTAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR GCA 90 bp GTTCAACACAGAATTCCGGCTTTGCTGAACTGCAATGCATATTCCCTCTTCTCATGGCCTCTAGGAGCTTaGCCTCATCCTTCAGCGTGG +
Preference number: 4 (lower is better)
Translates to: VQHRIPALLNCNAYSLFSWPLGA*PHPSAW
Trigger: CCACGCTGAAGGATGAGGGCAAGCTCCTAGAGGCCA...TGAGAAGAGGGAATATGCATTGCAGTTCAGCAAAGCCGGAATTCTGTGTTGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR GCA 90 bp GCAAACTGTTACTGTCTAAAGCTTTCAGAAGAACGTGTACAGACACCCTGCAGAAGGCTGCTGACATGGTaGAGCCGGTGTGCATCTTGG +
Preference number: 4 (lower is better)
Translates to: ANCYCLKLSEERVQTPCRRLLTW*SRCASW
Trigger: CCAAGATGCACACCGGCTGCACCATGTCAGCAGCCT...TCTGCAGGGTGTCTGTACACGTTCTTCTGAAAGCTTTAGACAGTAACAGTTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR GCA 90 bp CACACGCAAAAACACTCCCAATCACGGTGCTTTATACTTACTTTTAATTTCTGCGTCGTGACCAGCGTGTaGTCGTCCAGCCAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: HTQKHSQSRCFILTFNFCVVTSV*SSSQAR
Trigger: CCTGGCCTGGCTGGACGAGCACACGCTGGTCACGAC...GCAGAAATTAAAAGTAAGTATAAAGCACCGTGATTGGGAGTGTTTTTGCGTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CCA 90 bp TGTTTCGCATTCTCAAGGTTTGGTTGGGCTGTGGGTTTTAGTTATGCTCCACACTCTGGCCGTCAGCACTaGCTGTGGCAAATCTGTTCC +
Preference number: 4 (lower is better)
Translates to: CFAFSRFGWAVGFSYAPHSGRQH*LWQICS
Trigger: GGAACAGATTTGCCACAGCCAGTGCTGACGGCCAGA...GTGTGGAGCATAACTAAAACCCACAGCCCAACCAAACCTTGAGAATGCGAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CCA 90 bp CACACGCAAAAACACTCCCAATCACGGTGCTTTATACTTACTTTTAATTTCTGCAGGCAGCCCAGCTGCTaGTCCAGAACCGTGGAGCCC +
Preference number: 4 (lower is better)
Translates to: HTQKHSQSRCFILTFNFCRQPSC*SRTVEP
Trigger: GGGCTCCACGGTTCTGGACCAGCAGCTGGGCTGCCT...GCAGAAATTAAAAGTAAGTATAAAGCACCGTGATTGGGAGTGTTTTTGCGTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CCA 90 bp CAGGCTAATCTCTTAAAGCGCTCAAAGTGTTTTCACAAGTGCAAGGGGAGGGATGAGACACTGAGCAGGTaGTCCTTCTGCCATAGGCAG +
Preference number: 4 (lower is better)
Translates to: QANLLKRSKCFHKCKGRDETLSR*SFCHRQ
Trigger: CTGCCTATGGCAGAAGGACCACCTGCTCAGTGTCTC...ATCCCTCCCCTTGCACTTGTGAAAACACTTTGAGCGCTTTAAGAGATTAGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CCA 90 bp GTTTTCACAAGTGCAAGGGGAGGGATTGTTCTCAGCCAACATTTACCAGTGATTGACACCTGGTTCGTGTaGCCTTTCCCAGCGAAGGAG +
Preference number: 4 (lower is better)
Translates to: VFTSARGGIVLSQHLPVIDTWFV*PFPAKE
Trigger: CTCCTTCGCTGGGAAAGGCCACACGAACCAGGTGTC...AATCACTGGTAAATGTTGGCTGAGAACAATCCCTCCCCTTGCACTTGTGAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CCA 90 bp GCAAACTGTTACTGTCTAAAGCTTTCAGAAGAACGTGTACAGACACCCTGCAGACATCCACGGTCATCCTaGACACCTGGTTCGTGTGGC +
Preference number: 4 (lower is better)
Translates to: ANCYCLKLSEERVQTPCRHPRSS*TPGSCG
Trigger: GCCACACGAACCAGGTGTCCAGGATGACCGTGGATG...TCTGCAGGGTGTCTGTACACGTTCTTCTGAAAGCTTTAGACAGTAACAGTTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR CCA 90 bp TGTCTAAAGCTTTCAGAAGAACGTGTACAGACACCCTGCAGAGACGAGGGTCATCCTCATCCTTCAGCGTaGTGCCCAGGATGGAATACA +
Preference number: 4 (lower is better)
Translates to: CLKLSEERVQTPCRDEGHPHPSA*CPGWNT
Trigger: TGTATTCCATCCTGGGCACCACGCTGAAGGATGAGG...ATGACCCTCGTCTCTGCAGGGTGTCTGTACACGTTCTTCTGAAAGCTTTAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR CCA 90 bp TATTCCCTCTTCTCACTAGTACAGAAATGTTCTGCAGGCAGGAACATGAGCCCCAAAGTGTTCATTGTCTaGGGACCAGGCCAGGCAGAC +
Preference number: 4 (lower is better)
Translates to: YSLFSLVQKCSAGRNMSPKVFIV*GPGQAD
Trigger: GTCTGCCTGGCCTGGTCCCCAGACAATGAACACTTT...GGGGCTCATGTTCCTGCCTGCAGAACATTTCTGTACTAGTGAGAAGAGGGAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CCA 90 bp ATGTGCAAACTGTTACTGTCTAAAGCTTTCAGAAGAACGTGTACAGACACCCTGGCCAGGCTGCTGACATaGTGCAGCCGGTGTGCATCT +
Preference number: 4 (lower is better)
Translates to: MCKLLLSKAFRRTCTDTLARLLT*CSRCAS
Trigger: AGATGCACACCGGCTGCACCATGTCAGCAGCCTGGC...CAGGGTGTCTGTACACGTTCTTCTGAAAGCTTTAGACAGTAACAGTTTGCACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR CCA 90 bp TCTCAGGCTAATCTCTTAAAGCGCTCAAAGTGTTTTCACAAGTGCAAGGGGAGGTTGACAGAGGCATCATaGGAGGTCGTGACCAGCGTG +
Preference number: 4 (lower is better)
Translates to: SQANLLKRSKCFHKCKGRLTEAS*EVVTSV
Trigger: CACGCTGGTCACGACCTCCCATGATGCCTCTGTCAA...CCTCCCCTTGCACTTGTGAAAACACTTTGAGCGCTTTAAGAGATTAGCCTGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CCA 90 bp TGTTTCGCATTCTCAAGGTTTGGTTGGGCTGTGGGTTTTAGTTATGCTCCACACGGGCTCTGTGTGCTTTaGAGGCTACTGCCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: CFAFSRFGWAVGFSYAPHGLCVL*RLLPLE
Trigger: TTCCAGAGGCAGTAGCCTCCAAAGCACACAGAGCCC...GTGTGGAGCATAACTAAAACCCACAGCCCAACCAAACCTTGAGAATGCGAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CCA 90 bp GTTTTCACAAGTGCAAGGGGAGGGATTGTTCTCAGCCAACATTTACCAGTGATTTGTCCCCATCTGATCTaGAGGTGGCGCTCTGAAGGC +
Preference number: 4 (lower is better)
Translates to: VFTSARGGIVLSQHLPVICPHLI*RWRSEG
Trigger: GCCTTCAGAGCGCCACCTCCAGATCAGATGGGGACA...AATCACTGGTAAATGTTGGCTGAGAACAATCCCTCCCCTTGCACTTGTGAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CCA 90 bp AACGGTGACCAGGACACCTCGGTCTGGCTAACAAGGGTTCTAAAAACTTGGACAAGGGTTCTAAAAACTTaGACACGGTGCCGTCAACGC +
Preference number: 4 (lower is better)
Translates to: NGDQDTSVWLTRVLKTWTRVLKT*TRCRQR
Trigger: GCGTTGACGGCACCGTGTCCAAGTTTTTAGAACCCT...TGTCCAAGTTTTTAGAACCCTTGTTAGCCAGACCGAGGTGTCCTGGTCACCGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR TCA 90 bp CTGTCTAAAGCTTTCAGAAGAACGTGTACAGACACCCTGCAGAGACGAGGGTCATCCAAGCAATGTCTTTaGTCTTCCCAGCGAAAGGCT +
Preference number: 4 (lower is better)
Translates to: LSKAFRRTCTDTLQRRGSSKQCL*SSQRKA
Trigger: AGCCTTTCGCTGGGAAGATCAAAGACATTGCTTGGA...TGACCCTCGTCTCTGCAGGGTGTCTGTACACGTTCTTCTGAAAGCTTTAGACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382452.6
ENST00000499869.7
CDS-3UTR TCA 90 bp AACGGTGACCAGGACACCTCGGTCTGGCTAACAAGGGTTCTAAAAACTTGGACATCCAAGCAATGTCTTTaGTCTTCCCAGCGAAAGGCT +
Preference number: 4 (lower is better)
Translates to: NGDQDTSVWLTRVLKTWTSKQCL*SSQRKA
Trigger: AGCCTTTCGCTGGGAAGATCAAAGACATTGCTTGGA...TGTCCAAGTTTTTAGAACCCTTGTTAGCCAGACCGAGGTGTCCTGGTCACCGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382452.6
ENST00000499869.7
CDS-3UTR TCA 90 bp CTAAAGCTTTCAGAAGAACGTGTACAGACACCCTGCAGAGACGAGGGTCATGACCGATGTTCCTTAGGATaGCGCACTTTCCATTGGTGT +
Preference number: 4 (lower is better)
Translates to: LKLSEERVQTPCRDEGHDRCSLG*RTFHWC
Trigger: ACACCAATGGAAAGTGCGTCATCCTAAGGAACATCG...GTCATGACCCTCGTCTCTGCAGGGTGTCTGTACACGTTCTTCTGAAAGCTTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR TCA 90 bp GTTTTCACAAGTGCAAGGGGAGGGATTGTTCTCAGCCAACATTTACCAGTGATTCCACGGAGTTCACGCTaGCGTCCCAAATCTTGGAAG +
Preference number: 4 (lower is better)
Translates to: VFTSARGGIVLSQHLPVIPRSSR*RPKSWK
Trigger: CTTCCAAGATTTGGGACGTCAGCGTGAACTCCGTGG...AATCACTGGTAAATGTTGGCTGAGAACAATCCCTCCCCTTGCACTTGTGAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR TCA 90 bp CTAAAGCTTTCAGAAGAACGTGTACAGACACCCTGCAGAGACGAGGGTCATGACGTTCTCCCCCGTCTCTaGATCCCAGTAATTAATGTG +
Preference number: 4 (lower is better)
Translates to: LKLSEERVQTPCRDEGHDVLPRL*IPVINV
Trigger: CACATTAATTACTGGGATTCAGAGACGGGGGAGAAC...GTCATGACCCTCGTCTCTGCAGGGTGTCTGTACACGTTCTTCTGAAAGCTTTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR TCA 90 bp AACGGTGACCAGGACACCTCGGTCTGGCTAACAAGGGTTCTAAAAACTTGGACAGTTCTCCCCCGTCTCTaGATCCCAGTAATTAATGTG +
Preference number: 4 (lower is better)
Translates to: NGDQDTSVWLTRVLKTWTVLPRL*IPVINV
Trigger: CACATTAATTACTGGGATTCAGAGACGGGGGAGAAC...TGTCCAAGTTTTTAGAACCCTTGTTAGCCAGACCGAGGTGTCCTGGTCACCGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR GCA 90 bp ACACGCAAAAACACTCCCAATCACGGTGCTTTATACTTACTTTTAATTTCTGCACCCGCCGGGGTGCACTaGCACAACTTCGGGCTCGTA +
Preference number: 4 (lower is better)
Translates to: TRKNTPNHGALYLLLISAPAGVH*HNFGLV
Trigger: TACGAGCCCGAAGTTGTGGCAGTGCACCCCGGCGGG...TGCAGAAATTAAAAGTAAGTATAAAGCACCGTGATTGGGAGTGTTTTTGCGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CCA 90 bp GTTCAACACAGAATTCCGGCTTTGCTGAACTGCAATGCATATTCCCTCTTCTCAGGTGCTCCTTCTGCGTaGTATCCCAGATCCTCAGCT +
Preference number: 4 (lower is better)
Translates to: VQHRIPALLNCNAYSLFSGAPSA*YPRSSA
Trigger: AGCTGAGGATCTGGGATACCACGCAGAAGGAGCACC...TGAGAAGAGGGAATATGCATTGCAGTTCAGCAAAGCCGGAATTCTGTGTTGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CCA 90 bp ATGCTCCACACATTGTTTAGGTGCTCGCTTTATTTTTCATGTGCAAACTGTTACCGTGGCCAGCCGGTATaGCCGGCTCTGCTTGATGTC +
Preference number: 4 (lower is better)
Translates to: MLHTLFRCSLYFSCANCYRGQPV*PALLDV
Trigger: GACATCAAGCAGAGCCGGCCATACCGGCTGGCCACG...GTAACAGTTTGCACATGAAAAATAAAGCGAGCACCTAAACAATGTGTGGAGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CCA 90 bp GCAAACTGTTACTGTCTAAAGCTTTCAGAAGAACGTGTACAGACACCCTGCAGATCTGGCCGTCAGCACTaGCTGTGGCAAATCTGTTCC +
Preference number: 4 (lower is better)
Translates to: ANCYCLKLSEERVQTPCRSGRQH*LWQICS
Trigger: GGAACAGATTTGCCACAGCCAGTGCTGACGGCCAGA...TCTGCAGGGTGTCTGTACACGTTCTTCTGAAAGCTTTAGACAGTAACAGTTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR CCA 90 bp ATGTGCAAACTGTTACTGTCTAAAGCTTTCAGAAGAACGTGTACAGACACCCTGGCTGGTCCAGAACCGTaGAGCCCATGGGAAATGTGC +
Preference number: 4 (lower is better)
Translates to: MCKLLLSKAFRRTCTDTLAGPEP*SPWEMC
Trigger: GCACATTTCCCATGGGCTCCACGGTTCTGGACCAGC...CAGGGTGTCTGTACACGTTCTTCTGAAAGCTTTAGACAGTAACAGTTTGCACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR CCA 90 bp TTATGCTCCACACATTGTTTAGGTGCTCGCTTTATTTTTCATGTGCAAACTGTTAGGCAGCCCAGCTGCTaGTCCAGAACCGTGGAGCCC +
Preference number: 4 (lower is better)
Translates to: LCSTHCLGARFIFHVQTVRQPSC*SRTVEP
Trigger: GGGCTCCACGGTTCTGGACCAGCAGCTGGGCTGCCT...AACAGTTTGCACATGAAAAATAAAGCGAGCACCTAAACAATGTGTGGAGCATAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CCA 90 bp GCAAACTGTTACTGTCTAAAGCTTTCAGAAGAACGTGTACAGACACCCTGCAGAGTCATCCTGGACACCTaGTTCGTGTGGCCTTTCCCA +
Preference number: 4 (lower is better)
Translates to: ANCYCLKLSEERVQTPCRVILDT*FVWPFP
Trigger: TGGGAAAGGCCACACGAACCAGGTGTCCAGGATGAC...TCTGCAGGGTGTCTGTACACGTTCTTCTGAAAGCTTTAGACAGTAACAGTTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR CCA 90 bp ACAAGGTGTGAGTCACACACTAGGGAGACAGACATCTGTTCAACACAGAATTCCAAAGTGTTCATTGTCTaGGGACCAGGCCAGGCAGAC +
Preference number: 4 (lower is better)
Translates to: TRCESHTRETDICSTQNSKVFIV*GPGQAD
Trigger: GTCTGCCTGGCCTGGTCCCCAGACAATGAACACTTT...GGAATTCTGTGTTGAACAGATGTCTGTCTCCCTAGTGTGTGACTCACACCTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CCA 90 bp TATTCCCTCTTCTCACTAGTACAGAAATGTTCTGCAGGCAGGAACATGAGCCCCAGCCGGTGTGCATCTTaGATCTTGACTCTGGTTTCC +
Preference number: 4 (lower is better)
Translates to: YSLFSLVQKCSAGRNMSPSRCAS*ILTLVS
Trigger: GGAAACCAGAGTCAAGATCCAAGATGCACACCGGCT...GGGGCTCATGTTCCTGCCTGCAGAACATTTCTGTACTAGTGAGAAGAGGGAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CCA 90 bp TGTCTAAAGCTTTCAGAAGAACGTGTACAGACACCCTGCAGAGACGAGGGTCATAGCCGGTGTGCATCTTaGATCTTGACTCTGGTTTCC +
Preference number: 4 (lower is better)
Translates to: CLKLSEERVQTPCRDEGHSRCAS*ILTLVS
Trigger: GGAAACCAGAGTCAAGATCCAAGATGCACACCGGCT...ATGACCCTCGTCTCTGCAGGGTGTCTGTACACGTTCTTCTGAAAGCTTTAGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR CCA 90 bp GTTTTCACAAGTGCAAGGGGAGGGATTGTTCTCAGCCAACATTTACCAGTGATTTTGACAGAGGCATCATaGGAGGTCGTGACCAGCGTG +
Preference number: 4 (lower is better)
Translates to: VFTSARGGIVLSQHLPVILTEAS*EVVTSV
Trigger: CACGCTGGTCACGACCTCCCATGATGCCTCTGTCAA...AATCACTGGTAAATGTTGGCTGAGAACAATCCCTCCCCTTGCACTTGTGAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
3UTR CAA 72 bp GGCTACTGCCTCTGGAATGTTTCGCATTCTCAAGGTTaGGTTGGGCTGTGGGTTTTAGTTATGCTCCACACA +
Preference number: 4 (lower is better)
Translates to: GYCLWNVSHSQG*VGLWVLVMLHT
Trigger: TGTGTGGAGCATAACTAAAACCCACAGCCCAACCAAACCTTGAGAATGCGAAACATTCCAGAGGCAGTAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR TCA 90 bp GGGCTGTGGGTTTTAGTTATGCTCCACACATTGTTTAGGTGCTCGCTTTATTTTCCACGGAGTTCACGCTaGCGTCCCAAATCTTGGAAG +
Preference number: 4 (lower is better)
Translates to: GLWVLVMLHTLFRCSLYFPRSSR*RPKSWK
Trigger: CTTCCAAGATTTGGGACGTCAGCGTGAACTCCGTGG...AAAATAAAGCGAGCACCTAAACAATGTGTGGAGCATAACTAAAACCCACAGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR TCA 90 bp TCATGTGCAAACTGTTACTGTCTAAAGCTTTCAGAAGAACGTGTACAGACACCCCCACGGAGTTCACGCTaGCGTCCCAAATCTTGGAAG +
Preference number: 4 (lower is better)
Translates to: SCANCYCLKLSEERVQTPPRSSR*RPKSWK
Trigger: CTTCCAAGATTTGGGACGTCAGCGTGAACTCCGTGG...GGGTGTCTGTACACGTTCTTCTGAAAGCTTTAGACAGTAACAGTTTGCACATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR TCA 90 bp TCTCAGGCTAATCTCTTAAAGCGCTCAAAGTGTTTTCACAAGTGCAAGGGGAGGTTCTGTCCAGATAGTTaGTGTACCCGGACAGGGAGA +
Preference number: 4 (lower is better)
Translates to: SQANLLKRSKCFHKCKGRFCPDS*CTRTGR
Trigger: TCTCCCTGTCCGGGTACATCAACTATCTGGACAGAA...CCTCCCCTTGCACTTGTGAAAACACTTTGAGCGCTTTAAGAGATTAGCCTGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR TCA 90 bp ACACGCAAAAACACTCCCAATCACGGTGCTTTATACTTACTTTTAATTTCTGCATGTAGTCCCGCAGCATaGGGCTGGTGTACCGCACGG +
Preference number: 4 (lower is better)
Translates to: TRKNTPNHGALYLLLISACSPAA*GWCTAR
Trigger: CCGTGCGGTACACCAGCCTCATGCTGCGGGACTACA...TGCAGAAATTAAAAGTAAGTATAAAGCACCGTGATTGGGAGTGTTTTTGCGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR TCA 90 bp CAGGCTAATCTCTTAAAGCGCTCAAAGTGTTTTCACAAGTGCAAGGGGAGGGATCTGAAGCACTTCCTCTaGTCCTTCAGCAGGACAATC +
Preference number: 4 (lower is better)
Translates to: QANLLKRSKCFHKCKGRDLKHFL*SFSRTI
Trigger: GATTGTCCTGCTGAAGGATCAGAGGAAGTGCTTCAG...ATCCCTCCCCTTGCACTTGTGAAAACACTTTGAGCGCTTTAAGAGATTAGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR TCA 90 bp ATGTGCAAACTGTTACTGTCTAAAGCTTTCAGAAGAACGTGTACAGACACCCTGCGGGGTTGTCGATGCTaGAGCACTTCCTCTGATCCT +
Preference number: 4 (lower is better)
Translates to: MCKLLLSKAFRRTCTDTLRGCRC*STSSDP
Trigger: AGGATCAGAGGAAGTGCTTCAGCATCGACAACCCCG...CAGGGTGTCTGTACACGTTCTTCTGAAAGCTTTAGACAGTAACAGTTTGCACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR TCA 90 bp GGGCTGTGGGTTTTAGTTATGCTCCACACATTGTTTAGGTGCTCGCTTTATTTTCGGGGTTGTCGATGCTaGAGCACTTCCTCTGATCCT +
Preference number: 4 (lower is better)
Translates to: GLWVLVMLHTLFRCSLYFRGCRC*STSSDP
Trigger: AGGATCAGAGGAAGTGCTTCAGCATCGACAACCCCG...AAAATAAAGCGAGCACCTAAACAATGTGTGGAGCATAACTAAAACCCACAGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR TCA 90 bp GCAAACTGTTACTGTCTAAAGCTTTCAGAAGAACGTGTACAGACACCCTGCAGAGTGCATCTTGGATCTTaGCTCTGGTTTCCGGGTCAC +
Preference number: 4 (lower is better)
Translates to: ANCYCLKLSEERVQTPCRVHLGS*LWFPGH
Trigger: GTGACCCGGAAACCAGAGTCAAGATCCAAGATGCAC...TCTGCAGGGTGTCTGTACACGTTCTTCTGAAAGCTTTAGACAGTAACAGTTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR TCA 90 bp GGGCTGTGGGTTTTAGTTATGCTCCACACATTGTTTAGGTGCTCGCTTTATTTTATGATGGTGAAACGGTaGCCAGGACACCTCGGTCTG +
Preference number: 4 (lower is better)
Translates to: GLWVLVMLHTLFRCSLYFMMVKR*PGHLGL
Trigger: CAGACCGAGGTGTCCTGGTCACCGTTTCACCATCAT...AAAATAAAGCGAGCACCTAAACAATGTGTGGAGCATAACTAAAACCCACAGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR GCA 90 bp GTTCAACACAGAATTCCGGCTTTGCTGAACTGCAATGCATATTCCCTCTTCTCAGGGTCCCTCAAAGAATaGCGCGCAGTTATCATCGCT +
Preference number: 4 (lower is better)
Translates to: VQHRIPALLNCNAYSLFSGSLKE*RAVIIA
Trigger: AGCGATGATAACTGCGCGGCATTCTTTGAGGGACCC...TGAGAAGAGGGAATATGCATTGCAGTTCAGCAAAGCCGGAATTCTGTGTTGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382452.6
ENST00000499869.7
CDS-3UTR GCA 90 bp CTAAAGCTTTCAGAAGAACGTGTACAGACACCCTGCAGAGACGAGGGTCATGACAGTAAATGTAGGACTTaGCGCCGTTTTTATGCACCG +
Preference number: 4 (lower is better)
Translates to: LKLSEERVQTPCRDEGHDSKCRT*RRFYAP
Trigger: CGGTGCATAAAAACGGCGGCAAGTCCTACATTTACT...GTCATGACCCTCGTCTCTGCAGGGTGTCTGTACACGTTCTTCTGAAAGCTTTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR GCA 90 bp GTTCAACACAGAATTCCGGCTTTGCTGAACTGCAATGCATATTCCCTCTTCTCAGGACAATCTGTCCAATaGACACGACCACGGCGTATC +
Preference number: 4 (lower is better)
Translates to: VQHRIPALLNCNAYSLFSGQSVQ*TRPRRI
Trigger: GATACGCCGTGGTCGTGTGCATTGGACAGATTGTCC...TGAGAAGAGGGAATATGCATTGCAGTTCAGCAAAGCCGGAATTCTGTGTTGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR GCA 90 bp ATGCTCCACACATTGTTTAGGTGCTCGCTTTATTTTTCATGTGCAAACTGTTACGCCAGGGGCTCTGTGTaGTTTGGAGGCTACTGCCTC +
Preference number: 4 (lower is better)
Translates to: MLHTLFRCSLYFSCANCYARGSV*FGGYCL
Trigger: GAGGCAGTAGCCTCCAAAGCACACAGAGCCCCTGGC...GTAACAGTTTGCACATGAAAAATAAAGCGAGCACCTAAACAATGTGTGGAGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CCA 90 bp TGTCTAAAGCTTTCAGAAGAACGTGTACAGACACCCTGCAGAGACGAGGGTCATTTCCCAGCGAAAGGCTaGTACTCATACTTCAACAGG +
Preference number: 4 (lower is better)
Translates to: CLKLSEERVQTPCRDEGHFPAKG*YSYFNR
Trigger: CCTGTTGAAGTATGAGTACCAGCCTTTCGCTGGGAA...ATGACCCTCGTCTCTGCAGGGTGTCTGTACACGTTCTTCTGAAAGCTTTAGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CCA 90 bp TATTCCCTCTTCTCACTAGTACAGAAATGTTCTGCAGGCAGGAACATGAGCCCCTTCCCAGCGAAAGGCTaGTACTCATACTTCAACAGG +
Preference number: 4 (lower is better)
Translates to: YSLFSLVQKCSAGRNMSPFPAKG*YSYFNR
Trigger: CCTGTTGAAGTATGAGTACCAGCCTTTCGCTGGGAA...GGGGCTCATGTTCCTGCCTGCAGAACATTTCTGTACTAGTGAGAAGAGGGAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CCA 90 bp ACACGCAAAAACACTCCCAATCACGGTGCTTTATACTTACTTTTAATTTCTGCACGTGGCCAGCCGGTATaGCCGGCTCTGCTTGATGTC +
Preference number: 4 (lower is better)
Translates to: TRKNTPNHGALYLLLISARGQPV*PALLDV
Trigger: GACATCAAGCAGAGCCGGCCATACCGGCTGGCCACG...TGCAGAAATTAAAAGTAAGTATAAAGCACCGTGATTGGGAGTGTTTTTGCGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CCA 90 bp TCATGTGCAAACTGTTACTGTCTAAAGCTTTCAGAAGAACGTGTACAGACACCCGAGACACTGAGCAGGTaGTCCTTCTGCCATAGGCAG +
Preference number: 4 (lower is better)
Translates to: SCANCYCLKLSEERVQTPETLSR*SFCHRQ
Trigger: CTGCCTATGGCAGAAGGACCACCTGCTCAGTGTCTC...GGGTGTCTGTACACGTTCTTCTGAAAGCTTTAGACAGTAACAGTTTGCACATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR CCA 90 bp ATGTGCAAACTGTTACTGTCTAAAGCTTTCAGAAGAACGTGTACAGACACCCTGGAGACACTGAGCAGGTaGTCCTTCTGCCATAGGCAG +
Preference number: 4 (lower is better)
Translates to: MCKLLLSKAFRRTCTDTLETLSR*SFCHRQ
Trigger: CTGCCTATGGCAGAAGGACCACCTGCTCAGTGTCTC...CAGGGTGTCTGTACACGTTCTTCTGAAAGCTTTAGACAGTAACAGTTTGCACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR CCA 90 bp GGGCTGTGGGTTTTAGTTATGCTCCACACATTGTTTAGGTGCTCGCTTTATTTTCGTGCAGGGGCTTGCTaGGGTTGTTTCTGTCCAGAT +
Preference number: 4 (lower is better)
Translates to: GLWVLVMLHTLFRCSLYFRAGAC*GCFCPD
Trigger: ATCTGGACAGAAACAACCCCAGCAAGCCCCTGCACG...AAAATAAAGCGAGCACCTAAACAATGTGTGGAGCATAACTAAAACCCACAGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CCA 90 bp TCATGTGCAAACTGTTACTGTCTAAAGCTTTCAGAAGAACGTGTACAGACACCCGTCATCCTGGACACCTaGTTCGTGTGGCCTTTCCCA +
Preference number: 4 (lower is better)
Translates to: SCANCYCLKLSEERVQTPVILDT*FVWPFP
Trigger: TGGGAAAGGCCACACGAACCAGGTGTCCAGGATGAC...GGGTGTCTGTACACGTTCTTCTGAAAGCTTTAGACAGTAACAGTTTGCACATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR CCA 90 bp CACACGCAAAAACACTCCCAATCACGGTGCTTTATACTTACTTTTAATTTCTGCGCGTGGTGCCCAGGATaGAATACAGGCGGACGTTGC +
Preference number: 4 (lower is better)
Translates to: HTQKHSQSRCFILTFNFCAWCPG*NTGGRC
Trigger: GCAACGTCCGCCTGTATTCCATCCTGGGCACCACGC...GCAGAAATTAAAAGTAAGTATAAAGCACCGTGATTGGGAGTGTTTTTGCGTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CCA 90 bp ATGCTCCACACATTGTTTAGGTGCTCGCTTTATTTTTCATGTGCAAACTGTTACGCGTGGTGCCCAGGATaGAATACAGGCGGACGTTGC +
Preference number: 4 (lower is better)
Translates to: MLHTLFRCSLYFSCANCYAWCPG*NTGGRC
Trigger: GCAACGTCCGCCTGTATTCCATCCTGGGCACCACGC...GTAACAGTTTGCACATGAAAAATAAAGCGAGCACCTAAACAATGTGTGGAGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CCA 90 bp GTTTTCACAAGTGCAAGGGGAGGGATTGTTCTCAGCCAACATTTACCAGTGATTCCTCATCCTTCAGCGTaGTGCCCAGGATGGAATACA +
Preference number: 4 (lower is better)
Translates to: VFTSARGGIVLSQHLPVIPHPSA*CPGWNT
Trigger: TGTATTCCATCCTGGGCACCACGCTGAAGGATGAGG...AATCACTGGTAAATGTTGGCTGAGAACAATCCCTCCCCTTGCACTTGTGAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CCA 90 bp TATTTTTCATGTGCAAACTGTTACTGTCTAAAGCTTTCAGAAGAACGTGTACAGCGGTCACGGGGCCCTTaGCCTCTAGGAGCTTGCCCT +
Preference number: 4 (lower is better)
Translates to: YFSCANCYCLKLSEERVQRSRGP*PLGACP
Trigger: AGGGCAAGCTCCTAGAGGCCAAGGGCCCCGTGACCG...CTGTACACGTTCTTCTGAAAGCTTTAGACAGTAACAGTTTGCACATGAAAAATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR CCA 90 bp ATGTGCAAACTGTTACTGTCTAAAGCTTTCAGAAGAACGTGTACAGACACCCTGTTGACAGAGGCATCATaGGAGGTCGTGACCAGCGTG +
Preference number: 4 (lower is better)
Translates to: MCKLLLSKAFRRTCTDTLLTEAS*EVVTSV
Trigger: CACGCTGGTCACGACCTCCCATGATGCCTCTGTCAA...CAGGGTGTCTGTACACGTTCTTCTGAAAGCTTTAGACAGTAACAGTTTGCACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR CCA 90 bp ATGCTCCACACATTGTTTAGGTGCTCGCTTTATTTTTCATGTGCAAACTGTTACGACGAGGGTCATGACTaGGCCCTCCTGCCTCTTGTG +
Preference number: 4 (lower is better)
Translates to: MLHTLFRCSLYFSCANCYDEGHD*ALLPLV
Trigger: CACAAGAGGCAGGAGGGCCCAGTCATGACCCTCGTC...GTAACAGTTTGCACATGAAAAATAAAGCGAGCACCTAAACAATGTGTGGAGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CCA 90 bp TGTCTAAAGCTTTCAGAAGAACGTGTACAGACACCCTGCAGAGACGAGGGTCATGGTTTGGTTGGGCTGTaGGTTTTAGTTATGCTCCAC +
Preference number: 4 (lower is better)
Translates to: CLKLSEERVQTPCRDEGHGLVGL*VLVMLH
Trigger: GTGGAGCATAACTAAAACCCACAGCCCAACCAAACC...ATGACCCTCGTCTCTGCAGGGTGTCTGTACACGTTCTTCTGAAAGCTTTAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR TCA 90 bp TATTTTTCATGTGCAAACTGTTACTGTCTAAAGCTTTCAGAAGAACGTGTACAGCGGACAGGGAGACACTaGGCAGGTGGTCCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: YFSCANCYCLKLSEERVQRTGRH*AGGPSA
Trigger: GGCAGAAGGACCACCTGCTCAGTGTCTCCCTGTCCG...CTGTACACGTTCTTCTGAAAGCTTTAGACAGTAACAGTTTGCACATGAAAAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR TCA 90 bp GCAAACTGTTACTGTCTAAAGCTTTCAGAAGAACGTGTACAGACACCCTGCAGACTGAAGCACTTCCTCTaGTCCTTCAGCAGGACAATC +
Preference number: 4 (lower is better)
Translates to: ANCYCLKLSEERVQTPCRLKHFL*SFSRTI
Trigger: GATTGTCCTGCTGAAGGATCAGAGGAAGTGCTTCAG...TCTGCAGGGTGTCTGTACACGTTCTTCTGAAAGCTTTAGACAGTAACAGTTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR TCA 90 bp GTTCAACACAGAATTCCGGCTTTGCTGAACTGCAATGCATATTCCCTCTTCTCATTAAACTCTAGTCCCTaGTTCGGTCCATCCAGAGGC +
Preference number: 4 (lower is better)
Translates to: VQHRIPALLNCNAYSLFSLNSSP*FGPSRG
Trigger: GCCTCTGGATGGACCGAATCAGGGACTAGAGTTTAA...TGAGAAGAGGGAATATGCATTGCAGTTCAGCAAAGCCGGAATTCTGTGTTGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR TCA 90 bp AACGGTGACCAGGACACCTCGGTCTGGCTAACAAGGGTTCTAAAAACTTGGACAATTAACCTTTGCTCTTaGGAGCAGAAGAGGGAAAGA +
Preference number: 4 (lower is better)
Translates to: NGDQDTSVWLTRVLKTWTINLCS*EQKRER
Trigger: TCTTTCCCTCTTCTGCTCTCAAGAGCAAAGGTTAAT...TGTCCAAGTTTTTAGAACCCTTGTTAGCCAGACCGAGGTGTCCTGGTCACCGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR GCA 90 bp TACAGTGACTTCATCTTTGTCCTTAAATTAACCTTTGCTCTTGAGAGCAGAAGAGCCAGGGGCTCTGTGTaGTTTGGAGGCTACTGCCTC +
Preference number: 4 (lower is better)
Translates to: YSDFIFVLKLTFALESRRARGSV*FGGYCL
Trigger: GAGGCAGTAGCCTCCAAAGCACACAGAGCCCCTGGC...TCTTCTGCTCTCAAGAGCAAAGGTTAATTTAAGGACAAAGATGAAGTCACTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR GCA 90 bp CAGGCTAATCTCTTAAAGCGCTCAAAGTGTTTTCACAAGTGCAAGGGGAGGGATAAAACTTGGACACGGTaGCGTCAACGCACTAGTTTG +
Preference number: 4 (lower is better)
Translates to: QANLLKRSKCFHKCKGRDKTWTR*RQRTSL
Trigger: CAAACTAGTGCGTTGACGGCACCGTGTCCAAGTTTT...ATCCCTCCCCTTGCACTTGTGAAAACACTTTGAGCGCTTTAAGAGATTAGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CCA 90 bp TCATGTGCAAACTGTTACTGTCTAAAGCTTTCAGAAGAACGTGTACAGACACCCCGTCAGCACTGGCTGTaGCAAATCTGTTCCCATCAG +
Preference number: 4 (lower is better)
Translates to: SCANCYCLKLSEERVQTPRQHWL*QICSHQ
Trigger: CTGATGGGAACAGATTTGCCACAGCCAGTGCTGACG...GGGTGTCTGTACACGTTCTTCTGAAAGCTTTAGACAGTAACAGTTTGCACATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR CCA 90 bp GGGCTGTGGGTTTTAGTTATGCTCCACACATTGTTTAGGTGCTCGCTTTATTTTAAAGTGTTCATTGTCTaGGGACCAGGCCAGGCAGAC +
Preference number: 4 (lower is better)
Translates to: GLWVLVMLHTLFRCSLYFKVFIV*GPGQAD
Trigger: GTCTGCCTGGCCTGGTCCCCAGACAATGAACACTTT...AAAATAAAGCGAGCACCTAAACAATGTGTGGAGCATAACTAAAACCCACAGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CCA 90 bp ATGTGCAAACTGTTACTGTCTAAAGCTTTCAGAAGAACGTGTACAGACACCCTGAAAGTGTTCATTGTCTaGGGACCAGGCCAGGCAGAC +
Preference number: 4 (lower is better)
Translates to: MCKLLLSKAFRRTCTDTLKVFIV*GPGQAD
Trigger: GTCTGCCTGGCCTGGTCCCCAGACAATGAACACTTT...CAGGGTGTCTGTACACGTTCTTCTGAAAGCTTTAGACAGTAACAGTTTGCACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR CCA 90 bp TCTCAGGCTAATCTCTTAAAGCGCTCAAAGTGTTTTCACAAGTGCAAGGGGAGGGGTTTGGTTGGGCTGTaGGTTTTAGTTATGCTCCAC +
Preference number: 4 (lower is better)
Translates to: SQANLLKRSKCFHKCKGRGLVGL*VLVMLH
Trigger: GTGGAGCATAACTAAAACCCACAGCCCAACCAAACC...CCTCCCCTTGCACTTGTGAAAACACTTTGAGCGCTTTAAGAGATTAGCCTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CCA 90 bp TGTTTCGCATTCTCAAGGTTTGGTTGGGCTGTGGGTTTTAGTTATGCTCCACACGGAGGCTACTGCCTCTaGAATGTTTCGCATTCTCAA +
Preference number: 4 (lower is better)
Translates to: CFAFSRFGWAVGFSYAPHGGYCL*NVSHSQ
Trigger: TTGAGAATGCGAAACATTCCAGAGGCAGTAGCCTCC...GTGTGGAGCATAACTAAAACCCACAGCCCAACCAAACCTTGAGAATGCGAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CCA 90 bp ATGCTCCACACATTGTTTAGGTGCTCGCTTTATTTTTCATGTGCAAACTGTTACTGTCCCCATCTGATCTaGAGGTGGCGCTCTGAAGGC +
Preference number: 4 (lower is better)
Translates to: MLHTLFRCSLYFSCANCYCPHLI*RWRSEG
Trigger: GCCTTCAGAGCGCCACCTCCAGATCAGATGGGGACA...GTAACAGTTTGCACATGAAAAATAAAGCGAGCACCTAAACAATGTGTGGAGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CCA 90 bp TCTCAGGCTAATCTCTTAAAGCGCTCAAAGTGTTTTCACAAGTGCAAGGGGAGGCAGGACACCTCGGTCTaGCTAACAAGGGTTCTAAAA +
Preference number: 4 (lower is better)
Translates to: SQANLLKRSKCFHKCKGRQDTSV*LTRVLK
Trigger: TTTTAGAACCCTTGTTAGCCAGACCGAGGTGTCCTG...CCTCCCCTTGCACTTGTGAAAACACTTTGAGCGCTTTAAGAGATTAGCCTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR TCA 90 bp CACACGCAAAAACACTCCCAATCACGGTGCTTTATACTTACTTTTAATTTCTGCGCTCGCCCCCAGCTTTaGCCATATATAGTCAAGCGC +
Preference number: 4 (lower is better)
Translates to: HTQKHSQSRCFILTFNFCARPQL*PYIVKR
Trigger: GCGCTTGACTATATATGGTCAAAGCTGGGGGCGAGC...GCAGAAATTAAAAGTAAGTATAAAGCACCGTGATTGGGAGTGTTTTTGCGTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000382451.6
ENST00000382452.6
CDS-3UTR TCA 90 bp TCATGTGCAAACTGTTACTGTCTAAAGCTTTCAGAAGAACGTGTACAGACACCCGCTACGCACTTTGGCTaGACGTCCAGTTTCACAACT +
Preference number: 4 (lower is better)
Translates to: SCANCYCLKLSEERVQTPATHFG*TSSFTT
Trigger: AGTTGTGAAACTGGACGTTCAGCCAAAGTGCGTAGC...GGGTGTCTGTACACGTTCTTCTGAAAGCTTTAGACAGTAACAGTTTGCACATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR TCA 90 bp GGGCTGTGGGTTTTAGTTATGCTCCACACATTGTTTAGGTGCTCGCTTTATTTTTTAAACTCTAGTCCCTaGTTCGGTCCATCCAGAGGC +
Preference number: 4 (lower is better)
Translates to: GLWVLVMLHTLFRCSLYFLNSSP*FGPSRG
Trigger: GCCTCTGGATGGACCGAATCAGGGACTAGAGTTTAA...AAAATAAAGCGAGCACCTAAACAATGTGTGGAGCATAACTAAAACCCACAGCCC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR TCA 90 bp TTATGCTCCACACATTGTTTAGGTGCTCGCTTTATTTTTCATGTGCAAACTGTTCTGTACAACCTCCCCTaGCAGATAGTGAGAGCCGCG +
Preference number: 4 (lower is better)
Translates to: LCSTHCLGARFIFHVQTVLYNLP*QIVRAA
Trigger: CGCGGCTCTCACTATCTGTCAGGGGAGGTTGTACAG...AACAGTTTGCACATGAAAAATAAAGCGAGCACCTAAACAATGTGTGGAGCATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR TCA 90 bp GCAAACTGTTACTGTCTAAAGCTTTCAGAAGAACGTGTACAGACACCCTGCAGAGAATTCCGGCTTTGCTaGACTGCAATGCATATTCCC +
Preference number: 4 (lower is better)
Translates to: ANCYCLKLSEERVQTPCREFRLC*TAMHIP
Trigger: GGGAATATGCATTGCAGTTCAGCAAAGCCGGAATTC...TCTGCAGGGTGTCTGTACACGTTCTTCTGAAAGCTTTAGACAGTAACAGTTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR TCA 90 bp TTATGCTCCACACATTGTTTAGGTGCTCGCTTTATTTTTCATGTGCAAACTGTTTTGTGTGTCCCCATCTaGTCTGGAGGTGGCGCTCTG +
Preference number: 4 (lower is better)
Translates to: LCSTHCLGARFIFHVQTVLCVPI*SGGGAL
Trigger: CAGAGCGCCACCTCCAGATCAGATGGGGACACACAA...AACAGTTTGCACATGAAAAATAAAGCGAGCACCTAAACAATGTGTGGAGCATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR GCA 90 bp GTTTTCACAAGTGCAAGGGGAGGGATTGTTCTCAGCCAACATTTACCAGTGATTTCATACTTCAACAGGTaGTCCTTCTGCGTGGTATCC +
Preference number: 4 (lower is better)
Translates to: VFTSARGGIVLSQHLPVISYFNR*SFCVVS
Trigger: GGATACCACGCAGAAGGAGCACCTGTTGAAGTATGA...AATCACTGGTAAATGTTGGCTGAGAACAATCCCTCCCCTTGCACTTGTGAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382452.6
ENST00000499869.7
CDS-3UTR GCA 90 bp ACAAGGTGTGAGTCACACACTAGGGAGACAGACATCTGTTCAACACAGAATTCCAGTAAATGTAGGACTTaGCGCCGTTTTTATGCACCG +
Preference number: 4 (lower is better)
Translates to: TRCESHTRETDICSTQNSSKCRT*RRFYAP
Trigger: CGGTGCATAAAAACGGCGGCAAGTCCTACATTTACT...GGAATTCTGTGTTGAACAGATGTCTGTCTCCCTAGTGTGTGACTCACACCTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR GCA 90 bp TCATGTGCAAACTGTTACTGTCTAAAGCTTTCAGAAGAACGTGTACAGACACCCACACCATCATGTCCATaGCACCGGAGGCAAAGTGTT +
Preference number: 4 (lower is better)
Translates to: SCANCYCLKLSEERVQTPTPSCP*HRRQSV
Trigger: AACACTTTGCCTCCGGTGGCATGGACATGATGGTGT...GGGTGTCTGTACACGTTCTTCTGAAAGCTTTAGACAGTAACAGTTTGCACATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR GCA 90 bp ATGTGCAAACTGTTACTGTCTAAAGCTTTCAGAAGAACGTGTACAGACACCCTGACACCATCATGTCCATaGCACCGGAGGCAAAGTGTT +
Preference number: 4 (lower is better)
Translates to: MCKLLLSKAFRRTCTDTLTPSCP*HRRQSV
Trigger: AACACTTTGCCTCCGGTGGCATGGACATGATGGTGT...CAGGGTGTCTGTACACGTTCTTCTGAAAGCTTTAGACAGTAACAGTTTGCACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR GCA 90 bp CACACGCAAAAACACTCCCAATCACGGTGCTTTATACTTACTTTTAATTTCTGCCGTGTACAGACACCCTaGAGAGACGAGGGTCATGAC +
Preference number: 4 (lower is better)
Translates to: HTQKHSQSRCFILTFNFCRVQTP*RDEGHD
Trigger: GTCATGACCCTCGTCTCTGCAGGGTGTCTGTACACG...GCAGAAATTAAAAGTAAGTATAAAGCACCGTGATTGGGAGTGTTTTTGCGTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR GCA 90 bp GCAAACTGTTACTGTCTAAAGCTTTCAGAAGAACGTGTACAGACACCCTGCAGAAGTACAGAAATGTTCTaGAGGCAGGAACATGAGCCC +
Preference number: 4 (lower is better)
Translates to: ANCYCLKLSEERVQTPCRSTEMF*RQEHEP
Trigger: GGGCTCATGTTCCTGCCTGCAGAACATTTCTGTACT...TCTGCAGGGTGTCTGTACACGTTCTTCTGAAAGCTTTAGACAGTAACAGTTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR GCA 90 bp GTTCAACACAGAATTCCGGCTTTGCTGAACTGCAATGCATATTCCCTCTTCTCAAGTACAGAAATGTTCTaGAGGCAGGAACATGAGCCC +
Preference number: 4 (lower is better)
Translates to: VQHRIPALLNCNAYSLFSSTEMF*RQEHEP
Trigger: GGGCTCATGTTCCTGCCTGCAGAACATTTCTGTACT...TGAGAAGAGGGAATATGCATTGCAGTTCAGCAAAGCCGGAATTCTGTGTTGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR GCA 90 bp CTGTCTAAAGCTTTCAGAAGAACGTGTACAGACACCCTGCAGAGACGAGGGTCATTTGCTGAACTGCAATaGATATTCCCTCTTCTCACT +
Preference number: 4 (lower is better)
Translates to: LSKAFRRTCTDTLQRRGSFAELQ*IFPLLT
Trigger: AGTGAGAAGAGGGAATATGCATTGCAGTTCAGCAAA...TGACCCTCGTCTCTGCAGGGTGTCTGTACACGTTCTTCTGAAAGCTTTAGACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR GCA 90 bp GTTCAACACAGAATTCCGGCTTTGCTGAACTGCAATGCATATTCCCTCTTCTCAAAAACTTGGACACGGTaGCGTCAACGCACTAGTTTG +
Preference number: 4 (lower is better)
Translates to: VQHRIPALLNCNAYSLFSKTWTR*RQRTSL
Trigger: CAAACTAGTGCGTTGACGGCACCGTGTCCAAGTTTT...TGAGAAGAGGGAATATGCATTGCAGTTCAGCAAAGCCGGAATTCTGTGTTGAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR GCA 90 bp CAGGGGCTCTGTGTGCTTTGGAGGCTACTGCCTCTGGAATGTTTCGCATTCTCACACTCCCAATCACGGTaGTTTATACTTACTTTTAAT +
Preference number: 4 (lower is better)
Translates to: QGLCVLWRLLPLECFAFSHSQSR*FILTFN
Trigger: ATTAAAAGTAAGTATAAAGCACCGTGATTGGGAGTG...TGAGAATGCGAAACATTCCAGAGGCAGTAGCCTCCAAAGCACACAGAGCCCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CCA 90 bp TCTCAGGCTAATCTCTTAAAGCGCTCAAAGTGTTTTCACAAGTGCAAGGGGAGGGAACTTGAACTTGAATaGGGGTCCCTCAAAGAATGC +
Preference number: 4 (lower is better)
Translates to: SQANLLKRSKCFHKCKGRELELE*GSLKEC
Trigger: GCATTCTTTGAGGGACCCCCATTCAAGTTCAAGTTC...CCTCCCCTTGCACTTGTGAAAACACTTTGAGCGCTTTAAGAGATTAGCCTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CCA 90 bp CACACGCAAAAACACTCCCAATCACGGTGCTTTATACTTACTTTTAATTTCTGCTCTGGCCGTCAGCACTaGCTGTGGCAAATCTGTTCC +
Preference number: 4 (lower is better)
Translates to: HTQKHSQSRCFILTFNFCSGRQH*LWQICS
Trigger: GGAACAGATTTGCCACAGCCAGTGCTGACGGCCAGA...GCAGAAATTAAAAGTAAGTATAAAGCACCGTGATTGGGAGTGTTTTTGCGTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CCA 90 bp ATGCTCCACACATTGTTTAGGTGCTCGCTTTATTTTTCATGTGCAAACTGTTACTCTGGCCGTCAGCACTaGCTGTGGCAAATCTGTTCC +
Preference number: 4 (lower is better)
Translates to: MLHTLFRCSLYFSCANCYSGRQH*LWQICS
Trigger: GGAACAGATTTGCCACAGCCAGTGCTGACGGCCAGA...GTAACAGTTTGCACATGAAAAATAAAGCGAGCACCTAAACAATGTGTGGAGCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CCA 90 bp ATGTGCAAACTGTTACTGTCTAAAGCTTTCAGAAGAACGTGTACAGACACCCTGGAAGCAGAAAGCAAATaGGTGCTGTCGGGACTCCAA +
Preference number: 4 (lower is better)
Translates to: MCKLLLSKAFRRTCTDTLEAESK*VLSGLQ
Trigger: TTGGAGTCCCGACAGCACCCATTTGCTTTCTGCTTC...CAGGGTGTCTGTACACGTTCTTCTGAAAGCTTTAGACAGTAACAGTTTGCACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR CCA 90 bp GGGCTGTGGGTTTTAGTTATGCTCCACACATTGTTTAGGTGCTCGCTTTATTTTAGCCGGTGTGCATCTTaGATCTTGACTCTGGTTTCC +
Preference number: 4 (lower is better)
Translates to: GLWVLVMLHTLFRCSLYFSRCAS*ILTLVS
Trigger: GGAAACCAGAGTCAAGATCCAAGATGCACACCGGCT...AAAATAAAGCGAGCACCTAAACAATGTGTGGAGCATAACTAAAACCCACAGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CCA 90 bp GTTTTCACAAGTGCAAGGGGAGGGATTGTTCTCAGCCAACATTTACCAGTGATTGGAGGCTACTGCCTCTaGAATGTTTCGCATTCTCAA +
Preference number: 4 (lower is better)
Translates to: VFTSARGGIVLSQHLPVIGGYCL*NVSHSQ
Trigger: TTGAGAATGCGAAACATTCCAGAGGCAGTAGCCTCC...AATCACTGGTAAATGTTGGCTGAGAACAATCCCTCCCCTTGCACTTGTGAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
3UTR CAA 72 bp GGGAGACAGACATCTGTTCAACACAGAATTCCGGCTTaGCTGAACTGCAATGCATATTCCCTCTTCTCACTA +
Preference number: 4 (lower is better)
Translates to: GRQTSVQHRIPA*LNCNAYSLFSL
Trigger: TAGTGAGAAGAGGGAATATGCATTGCAGTTCAGCAAAGCCGGAATTCTGTGTTGAACAGATGTCTGTCTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR TCA 90 bp CTGTCTAAAGCTTTCAGAAGAACGTGTACAGACACCCTGCAGAGACGAGGGTCACTAGTTTGTAAACACTaGCAGGCAACAGTTAAGATA +
Preference number: 4 (lower is better)
Translates to: LSKAFRRTCTDTLQRRGSLVCKH*QATVKI
Trigger: TATCTTAACTGTTGCCTGTCAGTGTTTACAAACTAG...TGACCCTCGTCTCTGCAGGGTGTCTGTACACGTTCTTCTGAAAGCTTTAGACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR TCA 90 bp TACAGTGACTTCATCTTTGTCCTTAAATTAACCTTTGCTCTTGAGAGCAGAAGAATGATGGTGAAACGGTaGCCAGGACACCTCGGTCTG +
Preference number: 4 (lower is better)
Translates to: YSDFIFVLKLTFALESRRMMVKR*PGHLGL
Trigger: CAGACCGAGGTGTCCTGGTCACCGTTTCACCATCAT...TCTTCTGCTCTCAAGAGCAAAGGTTAATTTAAGGACAAAGATGAAGTCACTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR GCA 90 bp TCATGTGCAAACTGTTACTGTCTAAAGCTTTCAGAAGAACGTGTACAGACACCCAAAACTTGGACACGGTaGCGTCAACGCACTAGTTTG +
Preference number: 4 (lower is better)
Translates to: SCANCYCLKLSEERVQTPKTWTR*RQRTSL
Trigger: CAAACTAGTGCGTTGACGGCACCGTGTCCAAGTTTT...GGGTGTCTGTACACGTTCTTCTGAAAGCTTTAGACAGTAACAGTTTGCACATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CCA 90 bp ATGCTCCACACATTGTTTAGGTGCTCGCTTTATTTTTCATGTGCAAACTGTTACCAATGTAGAATCCGCTaGGCGCATACTTGGCCACCA +
Preference number: 4 (lower is better)
Translates to: MLHTLFRCSLYFSCANCYQCRIR*AHTWPP
Trigger: TGGTGGCCAAGTATGCGCCCAGCGGATTCTACATTG...GTAACAGTTTGCACATGAAAAATAAAGCGAGCACCTAAACAATGTGTGGAGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CCA 90 bp GCAAACTGTTACTGTCTAAAGCTTTCAGAAGAACGTGTACAGACACCCTGCAGAGAACTTGAACTTGAATaGGGGTCCCTCAAAGAATGC +
Preference number: 4 (lower is better)
Translates to: ANCYCLKLSEERVQTPCRELELE*GSLKEC
Trigger: GCATTCTTTGAGGGACCCCCATTCAAGTTCAAGTTC...TCTGCAGGGTGTCTGTACACGTTCTTCTGAAAGCTTTAGACAGTAACAGTTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CCA 90 bp ATGCTCCACACATTGTTTAGGTGCTCGCTTTATTTTTCATGTGCAAACTGTTACCGTCAGCACTGGCTGTaGCAAATCTGTTCCCATCAG +
Preference number: 4 (lower is better)
Translates to: MLHTLFRCSLYFSCANCYRQHWL*QICSHQ
Trigger: CTGATGGGAACAGATTTGCCACAGCCAGTGCTGACG...GTAACAGTTTGCACATGAAAAATAAAGCGAGCACCTAAACAATGTGTGGAGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CCA 90 bp TACAGTGACTTCATCTTTGTCCTTAAATTAACCTTTGCTCTTGAGAGCAGAAGAGGGCTCTGTGTGCTTTaGAGGCTACTGCCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: YSDFIFVLKLTFALESRRGLCVL*RLLPLE
Trigger: TTCCAGAGGCAGTAGCCTCCAAAGCACACAGAGCCC...TCTTCTGCTCTCAAGAGCAAAGGTTAATTTAAGGACAAAGATGAAGTCACTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CCA 90 bp TATTTTTCATGTGCAAACTGTTACTGTCTAAAGCTTTCAGAAGAACGTGTACAGCATCTGATCTGGAGGTaGCGCTCTGAAGGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: YFSCANCYCLKLSEERVQHLIWR*RSEGSH
Trigger: GTGGCTGCCTTCAGAGCGCCACCTCCAGATCAGATG...CTGTACACGTTCTTCTGAAAGCTTTAGACAGTAACAGTTTGCACATGAAAAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CCA 90 bp TCATGTGCAAACTGTTACTGTCTAAAGCTTTCAGAAGAACGTGTACAGACACCCCAGGACACCTCGGTCTaGCTAACAAGGGTTCTAAAA +
Preference number: 4 (lower is better)
Translates to: SCANCYCLKLSEERVQTPQDTSV*LTRVLK
Trigger: TTTTAGAACCCTTGTTAGCCAGACCGAGGTGTCCTG...GGGTGTCTGTACACGTTCTTCTGAAAGCTTTAGACAGTAACAGTTTGCACATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR TCA 90 bp CACACGCAAAAACACTCCCAATCACGGTGCTTTATACTTACTTTTAATTTCTGCCTGAAGCACTTCCTCTaGTCCTTCAGCAGGACAATC +
Preference number: 4 (lower is better)
Translates to: HTQKHSQSRCFILTFNFCLKHFL*SFSRTI
Trigger: GATTGTCCTGCTGAAGGATCAGAGGAAGTGCTTCAG...GCAGAAATTAAAAGTAAGTATAAAGCACCGTGATTGGGAGTGTTTTTGCGTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR TCA 90 bp TCTCAGGCTAATCTCTTAAAGCGCTCAAAGTGTTTTCACAAGTGCAAGGGGAGGACAGAAATAGAGAAATaGCATGTTCCGCTGCAGTTA +
Preference number: 4 (lower is better)
Translates to: SQANLLKRSKCFHKCKGRTEIEK*HVPLQL
Trigger: TAACTGCAGCGGAACATGTCATTTCTCTATTTCTGT...CCTCCCCTTGCACTTGTGAAAACACTTTGAGCGCTTTAAGAGATTAGCCTGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR GCA 90 bp ACACGCAAAAACACTCCCAATCACGGTGCTTTATACTTACTTTTAATTTCTGCAAACAGGTGCTCCTTCTaGGTGGTATCCCAGATCCTC +
Preference number: 4 (lower is better)
Translates to: TRKNTPNHGALYLLLISANRCSF*VVSQIL
Trigger: GAGGATCTGGGATACCACGCAGAAGGAGCACCTGTT...TGCAGAAATTAAAAGTAAGTATAAAGCACCGTGATTGGGAGTGTTTTTGCGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382452.6
ENST00000499869.7
CDS-3UTR GCA 90 bp GGGCTGTGGGTTTTAGTTATGCTCCACACATTGTTTAGGTGCTCGCTTTATTTTAGTAAATGTAGGACTTaGCGCCGTTTTTATGCACCG +
Preference number: 4 (lower is better)
Translates to: GLWVLVMLHTLFRCSLYFSKCRT*RRFYAP
Trigger: CGGTGCATAAAAACGGCGGCAAGTCCTACATTTACT...AAAATAAAGCGAGCACCTAAACAATGTGTGGAGCATAACTAAAACCCACAGCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR GCA 90 bp TATTTTTCATGTGCAAACTGTTACTGTCTAAAGCTTTCAGAAGAACGTGTACAGCATCCTTCAGCGTGGTaGCCAGGATGGAATACAGGC +
Preference number: 4 (lower is better)
Translates to: YFSCANCYCLKLSEERVQHPSAW*PGWNTG
Trigger: GCCTGTATTCCATCCTGGGCACCACGCTGAAGGATG...CTGTACACGTTCTTCTGAAAGCTTTAGACAGTAACAGTTTGCACATGAAAAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR CCA 90 bp CACACGCAAAAACACTCCCAATCACGGTGCTTTATACTTACTTTTAATTTCTGCGAAGCAGAAAGCAAATaGGTGCTGTCGGGACTCCAA +
Preference number: 4 (lower is better)
Translates to: HTQKHSQSRCFILTFNFCEAESK*VLSGLQ
Trigger: TTGGAGTCCCGACAGCACCCATTTGCTTTCTGCTTC...GCAGAAATTAAAAGTAAGTATAAAGCACCGTGATTGGGAGTGTTTTTGCGTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR TCA 90 bp CACACGCAAAAACACTCCCAATCACGGTGCTTTATACTTACTTTTAATTTCTGCGTTCTCCCCCGTCTCTaGATCCCAGTAATTAATGTG +
Preference number: 4 (lower is better)
Translates to: HTQKHSQSRCFILTFNFCVLPRL*IPVINV
Trigger: CACATTAATTACTGGGATTCAGAGACGGGGGAGAAC...GCAGAAATTAAAAGTAAGTATAAAGCACCGTGATTGGGAGTGTTTTTGCGTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR TCA 90 bp TTATGCTCCACACATTGTTTAGGTGCTCGCTTTATTTTTCATGTGCAAACTGTTTTAAACTCTAGTCCCTaGTTCGGTCCATCCAGAGGC +
Preference number: 4 (lower is better)
Translates to: LCSTHCLGARFIFHVQTVLNSSP*FGPSRG
Trigger: GCCTCTGGATGGACCGAATCAGGGACTAGAGTTTAA...AACAGTTTGCACATGAAAAATAAAGCGAGCACCTAAACAATGTGTGGAGCATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR TCA 90 bp ACAAGGTGTGAGTCACACACTAGGGAGACAGACATCTGTTCAACACAGAATTCCCTAGTTTGTAAACACTaGCAGGCAACAGTTAAGATA +
Preference number: 4 (lower is better)
Translates to: TRCESHTRETDICSTQNSLVCKH*QATVKI
Trigger: TATCTTAACTGTTGCCTGTCAGTGTTTACAAACTAG...GGAATTCTGTGTTGAACAGATGTCTGTCTCCCTAGTGTGTGACTCACACCTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR GCA 90 bp ACACGCAAAAACACTCCCAATCACGGTGCTTTATACTTACTTTTAATTTCTGCAATCCCAGAGGAAGACTaGTCCAAACTTCTCCCTTCC +
Preference number: 4 (lower is better)
Translates to: TRKNTPNHGALYLLLISAIPEED*SKLLPS
Trigger: GGAAGGGAGAAGTTTGGAGCAGTCTTCCTCTGGGAT...TGCAGAAATTAAAAGTAAGTATAAAGCACCGTGATTGGGAGTGTTTTTGCGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CCA 90 bp TACAGTGACTTCATCTTTGTCCTTAAATTAACCTTTGCTCTTGAGAGCAGAAGAAGGGTTCTAAAAACTTaGACACGGTGCCGTCAACGC +
Preference number: 4 (lower is better)
Translates to: YSDFIFVLKLTFALESRRRVLKT*TRCRQR
Trigger: GCGTTGACGGCACCGTGTCCAAGTTTTTAGAACCCT...TCTTCTGCTCTCAAGAGCAAAGGTTAATTTAAGGACAAAGATGAAGTCACTGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
3UTR CAA 72 bp TTGGTTGGGCTGTGGGTTTTAGTTATGCTCCACACATaGTTTAGGTGCTCGCTTTATTTTTCATGTGCAAAC +
Preference number: 4 (lower is better)
Translates to: LVGLWVLVMLHT*FRCSLYFSCAN
Trigger: GTTTGCACATGAAAAATAAAGCGAGCACCTAAACAATGTGTGGAGCATAACTAAAACCCACAGCCCAACCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR TCA 90 bp TATTTTTCATGTGCAAACTGTTACTGTCTAAAGCTTTCAGAAGAACGTGTACAGGCTACGCACTTTGGCTaGACGTCCAGTTTCACAACT +
Preference number: 4 (lower is better)
Translates to: YFSCANCYCLKLSEERVQATHFG*TSSFTT
Trigger: AGTTGTGAAACTGGACGTTCAGCCAAAGTGCGTAGC...CTGTACACGTTCTTCTGAAAGCTTTAGACAGTAACAGTTTGCACATGAAAAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR TCA 90 bp ATGTGCAAACTGTTACTGTCTAAAGCTTTCAGAAGAACGTGTACAGACACCCTGACAGAAATAGAGAAATaGCATGTTCCGCTGCAGTTA +
Preference number: 4 (lower is better)
Translates to: MCKLLLSKAFRRTCTDTLTEIEK*HVPLQL
Trigger: TAACTGCAGCGGAACATGTCATTTCTCTATTTCTGT...CAGGGTGTCTGTACACGTTCTTCTGAAAGCTTTAGACAGTAACAGTTTGCACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR TCA 90 bp ACACGCAAAAACACTCCCAATCACGGTGCTTTATACTTACTTTTAATTTCTGCAGAATTCCGGCTTTGCTaGACTGCAATGCATATTCCC +
Preference number: 4 (lower is better)
Translates to: TRKNTPNHGALYLLLISAEFRLC*TAMHIP
Trigger: GGGAATATGCATTGCAGTTCAGCAAAGCCGGAATTC...TGCAGAAATTAAAAGTAAGTATAAAGCACCGTGATTGGGAGTGTTTTTGCGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR TCA 90 bp TTATGCTCCACACATTGTTTAGGTGCTCGCTTTATTTTTCATGTGCAAACTGTTGAATTCCGGCTTTGCTaGACTGCAATGCATATTCCC +
Preference number: 4 (lower is better)
Translates to: LCSTHCLGARFIFHVQTVEFRLC*TAMHIP
Trigger: GGGAATATGCATTGCAGTTCAGCAAAGCCGGAATTC...AACAGTTTGCACATGAAAAATAAAGCGAGCACCTAAACAATGTGTGGAGCATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR GCA 90 bp ACACGCAAAAACACTCCCAATCACGGTGCTTTATACTTACTTTTAATTTCTGCATCATACTTCAACAGGTaGTCCTTCTGCGTGGTATCC +
Preference number: 4 (lower is better)
Translates to: TRKNTPNHGALYLLLISASYFNR*SFCVVS
Trigger: GGATACCACGCAGAAGGAGCACCTGTTGAAGTATGA...TGCAGAAATTAAAAGTAAGTATAAAGCACCGTGATTGGGAGTGTTTTTGCGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382452.6
ENST00000499869.7
CDS-3UTR GCA 90 bp TATTTTTCATGTGCAAACTGTTACTGTCTAAAGCTTTCAGAAGAACGTGTACAGACACCATCATGTCCATaGCACCGGAGGCAAAGTGTT +
Preference number: 4 (lower is better)
Translates to: YFSCANCYCLKLSEERVQTPSCP*HRRQSV
Trigger: AACACTTTGCCTCCGGTGGCATGGACATGATGGTGT...CTGTACACGTTCTTCTGAAAGCTTTAGACAGTAACAGTTTGCACATGAAAAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR CCA 90 bp TACAGTGACTTCATCTTTGTCCTTAAATTAACCTTTGCTCTTGAGAGCAGAAGAGGTTTGGTTGGGCTGTaGGTTTTAGTTATGCTCCAC +
Preference number: 4 (lower is better)
Translates to: YSDFIFVLKLTFALESRRGLVGL*VLVMLH
Trigger: GTGGAGCATAACTAAAACCCACAGCCCAACCAAACC...TCTTCTGCTCTCAAGAGCAAAGGTTAATTTAAGGACAAAGATGAAGTCACTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CCA 90 bp ACACGCAAAAACACTCCCAATCACGGTGCTTTATACTTACTTTTAATTTCTGCAGGAGGCTACTGCCTCTaGAATGTTTCGCATTCTCAA +
Preference number: 4 (lower is better)
Translates to: TRKNTPNHGALYLLLISAGGYCL*NVSHSQ
Trigger: TTGAGAATGCGAAACATTCCAGAGGCAGTAGCCTCC...TGCAGAAATTAAAAGTAAGTATAAAGCACCGTGATTGGGAGTGTTTTTGCGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR GCA 90 bp TATTTTTCATGTGCAAACTGTTACTGTCTAAAGCTTTCAGAAGAACGTGTACAGAGTACAGAAATGTTCTaGAGGCAGGAACATGAGCCC +
Preference number: 4 (lower is better)
Translates to: YFSCANCYCLKLSEERVQSTEMF*RQEHEP
Trigger: GGGCTCATGTTCCTGCCTGCAGAACATTTCTGTACT...CTGTACACGTTCTTCTGAAAGCTTTAGACAGTAACAGTTTGCACATGAAAAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR GCA 90 bp GCAAACTGTTACTGTCTAAAGCTTTCAGAAGAACGTGTACAGACACCCTGCAGACACTCCCAATCACGGTaGTTTATACTTACTTTTAAT +
Preference number: 4 (lower is better)
Translates to: ANCYCLKLSEERVQTPCRHSQSR*FILTFN
Trigger: ATTAAAAGTAAGTATAAAGCACCGTGATTGGGAGTG...TCTGCAGGGTGTCTGTACACGTTCTTCTGAAAGCTTTAGACAGTAACAGTTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR TCA 90 bp TATTTTTCATGTGCAAACTGTTACTGTCTAAAGCTTTCAGAAGAACGTGTACAGGCCAACATTTACCAGTaGTTCCGACACACGCAAAAA +
Preference number: 4 (lower is better)
Translates to: YFSCANCYCLKLSEERVQANIYQ*FRHTQK
Trigger: TTTTTGCGTGTGTCGGAATCACTGGTAAATGTTGGC...CTGTACACGTTCTTCTGAAAGCTTTAGACAGTAACAGTTTGCACATGAAAAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR GCA 90 bp TATTTTTCATGTGCAAACTGTTACTGTCTAAAGCTTTCAGAAGAACGTGTACAGAGTAAATGTAGGACTTaGCGCCGTTTTTATGCACCG +
Preference number: 4 (lower is better)
Translates to: YFSCANCYCLKLSEERVQSKCRT*RRFYAP
Trigger: CGGTGCATAAAAACGGCGGCAAGTCCTACATTTACT...CTGTACACGTTCTTCTGAAAGCTTTAGACAGTAACAGTTTGCACATGAAAAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR GCA 90 bp ATGCTCCACACATTGTTTAGGTGCTCGCTTTATTTTTCATGTGCAAACTGTTACTTTGCTGAACTGCAATaGATATTCCCTCTTCTCACT +
Preference number: 4 (lower is better)
Translates to: MLHTLFRCSLYFSCANCYFAELQ*IFPLLT
Trigger: AGTGAGAAGAGGGAATATGCATTGCAGTTCAGCAAA...GTAACAGTTTGCACATGAAAAATAAAGCGAGCACCTAAACAATGTGTGGAGCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR GCA 90 bp TCATGTGCAAACTGTTACTGTCTAAAGCTTTCAGAAGAACGTGTACAGACACCCCACTCCCAATCACGGTaGTTTATACTTACTTTTAAT +
Preference number: 4 (lower is better)
Translates to: SCANCYCLKLSEERVQTPHSQSR*FILTFN
Trigger: ATTAAAAGTAAGTATAAAGCACCGTGATTGGGAGTG...GGGTGTCTGTACACGTTCTTCTGAAAGCTTTAGACAGTAACAGTTTGCACATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR TCA 90 bp TATTTTTCATGTGCAAACTGTTACTGTCTAAAGCTTTCAGAAGAACGTGTACAGATTAACCTTTGCTCTTaGGAGCAGAAGAGGGAAAGA +
Preference number: 4 (lower is better)
Translates to: YFSCANCYCLKLSEERVQINLCS*EQKRER
Trigger: TCTTTCCCTCTTCTGCTCTCAAGAGCAAAGGTTAAT...CTGTACACGTTCTTCTGAAAGCTTTAGACAGTAACAGTTTGCACATGAAAAATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS GCA 90 bp TGGGCGGTCCGAGGCCGGGGCTCAGAGGCCAGCTCGCGCCTGCCCTaGGCGCTGTGGTTGCGGACGCCCCGAACCCGGAAGCGCGGTCCC +
Preference number: 5 (lower is better)
Translates to: WAVRGRGSEASSRLP*ALWLRTPRTRKRGP
Trigger: GGGACCGCGCTTCCGGGTTCGGGGCGTCCGCAACCACAGCGCGCAGGGCAGGCGCGAGCTGGCCTCTGAGCCCCGGCCTCGGACCGCCCA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382451.6
ENST00000382452.6
CDS GCA 90 bp TGGAGTGGGCGGTCCGAGGCCGGGGCTCAGAGGCCAGCTCGCGCCTaGCCTGCGCGCTGTGGTTGCGGACGCCCCGAACCCGGAAGCGCG +
Preference number: 5 (lower is better)
Translates to: WSGRSEAGAQRPARA*PARCGCGRPEPGSA
Trigger: CGCGCTTCCGGGTTCGGGGCGTCCGCAACCACAGCGCGCAGGGCAGGCGCGAGCTGGCCTCTGAGCCCCGGCCTCGGACCGCCCACTCCA
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382451.6
ENST00000382452.6
CDS CCA 90 bp TCACATACAGGGGCACCTGCCCATCCCGCCAGACAGATGGCCTCGTaGGCTCTCCCAGCCTGGACGACCTCCTCCCCAGGCCGTGCTGCC +
Preference number: 5 (lower is better)
Translates to: SHTGAPAHPARQMAS*ALPAWTTSSPGRAA
Trigger: GGCAGCACGGCCTGGGGAGGAGGTCGTCCAGGCTGGGAGAGCCCACGAGGCCATCTGTCTGGCGGGATGGGCAGGTGCCCCTGTATGTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264785.11
CDS CCA 90 bp TCTCACGCTCACATACAGGGGCACCTGCCCATCCCGCCAGACAGATaGCCTCGTGGGCTCTCCCAGCCTGGACGACCTCCTCCCCAGGCC +
Preference number: 5 (lower is better)
Translates to: SHAHIQGHLPIPPDR*PRGLSQPGRPPPQA
Trigger: GGCCTGGGGAGGAGGTCGTCCAGGCTGGGAGAGCCCACGAGGCCATCTGTCTGGCGGGATGGGCAGGTGCCCCTGTATGTGAGCGTGAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264785.11
CDS CCA 90 bp GGAAGGCGCCGTCGTGGGAGTAGGCCACGTCGGTCACGGGGCCCTTaGCCTCTAGGAGCTTGCCCTCATCCTTCAGCGTGGTGCCCAGGA +
Preference number: 5 (lower is better)
Translates to: GRRRRGSRPRRSRGP*PLGACPHPSAWCPG
Trigger: TCCTGGGCACCACGCTGAAGGATGAGGGCAAGCTCCTAGAGGCCAAGGGCCCCGTGACCGACGTGGCCTACTCCCACGACGGCGCCTTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
ENST00000502962.5
ENST00000515743.5
CDS GCA 90 bp CCCTTAGGGTCGCCGCCGATGATCTTGGAGACGCCCCTCTCCACCTaGGGGAGGCTGGCGAACACCTTCTCTGTTGACTGCGCCGGGAGG +
Preference number: 5 (lower is better)
Translates to: PLGSPPMILETPLST*GRLANTFSVDCAGR
Trigger: CCTCCCGGCGCAGTCAACAGAGAAGGTGTTCGCCAGCCTCCCGCAGGTGGAGAGGGGCGTCTCCAAGATCATCGGCGGCGACCCTAAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505851.5
ENST00000514319.5
CDS CCA 90 bp GTGCATGGGGCCCCCGTGGTCCCTCAGTACGGCCAGCAGCGCAGCTaGTGTTTGCTGGATGGAAGGAGACCCACAACTCTTCCGGGCCAC +
Preference number: 5 (lower is better)
Translates to: VHGAPVVPQYGQQRS*CLLDGRRPTTLPGH
Trigger: GTGGCCCGGAAGAGTTGTGGGTCTCCTTCCATCCAGCAAACACCAGCTGCGCTGCTGGCCGTACTGAGGGACCACGGGGGCCCCATGCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515743.5
CDS-3UTR CAA 90 bp CAGACACCCTGCAGAGACGAGGGTCATGACTGGGCCCTCCTGCCTCTTGTGGTGTCGGTCACGGGGCCCTaGGCCTCTAGGAGCTTGCCC +
Preference number: 5 (lower is better)
Translates to: QTPCRDEGHDWALLPLVVSVTGP*ASRSLP
Trigger: GGGCAAGCTCCTAGAGGCCAAGGGCCCCGTGACCGA...CACCACAAGAGGCAGGAGGGCCCAGTCATGACCCTCGTCTCTGCAGGGTGTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS GCA 90 bp CGGGGCCCTTGGCCTCTAGGAGCTTGCCCTCATCCTTCAGCGTGGTaGCCAGGATGGAATACAGGCGGACGTTGCCGTCCACACCCCCAA +
Preference number: 5 (lower is better)
Translates to: RGPWPLGACPHPSAW*PGWNTGGRCRPHPQ
Trigger: TTGGGGGTGTGGACGGCAACGTCCGCCTGTATTCCATCCTGGGCACCACGCTGAAGGATGAGGGCAAGCTCCTAGAGGCCAAGGGCCCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
ENST00000502962.5
ENST00000515743.5
CDS GCA 90 bp GGGAGTAGGCCACGTCGGTCACGGGGCCCTTGGCCTCTAGGAGCTTaGCCTCATCCTTCAGCGTGGTGCCCAGGATGGAATACAGGCGGA +
Preference number: 5 (lower is better)
Translates to: GSRPRRSRGPWPLGA*PHPSAWCPGWNTGG
Trigger: TCCGCCTGTATTCCATCCTGGGCACCACGCTGAAGGATGAGGGCAAGCTCCTAGAGGCCAAGGGCCCCGTGACCGACGTGGCCTACTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
ENST00000502962.5
ENST00000515743.5
CDS GCA 90 bp CCCTTAGGGTCGCCGCCGATGATCTTGGAGACGCCCCTCTCCACCTaGGGGAGGCTGGCGAACACCTTCTCTGCGGAGACACAAATGCGG +
Preference number: 5 (lower is better)
Translates to: PLGSPPMILETPLST*GRLANTFSAETQMR
Trigger: CCGCATTTGTGTCTCCGCAGAGAAGGTGTTCGCCAGCCTCCCGCAGGTGGAGAGGGGCGTCTCCAAGATCATCGGCGGCGACCCTAAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508079.1
CDS GCA 90 bp GGGCCCCCGTGGTCCCTCAGTACGGCCAGCAGCGCAGCTGGTGTTTaGTGGATGGAAGGAGACCCACAACTCTTCCGGGCCACCTGTCTT +
Preference number: 5 (lower is better)
Translates to: GPPWSLSTASSAAGV*WMEGDPQLFRATCL
Trigger: AAGACAGGTGGCCCGGAAGAGTTGTGGGTCTCCTTCCATCCAGCAAACACCAGCTGCGCTGCTGGCCGTACTGAGGGACCACGGGGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515743.5
CDS CCA 90 bp TCACGGGGCCCTTGGCCTCTAGGAGCTTGCCCTCATCCTTCAGCGTaGTGCCCAGGATGGAATACAGGCGGACGTTGCCGTCCACACCCC +
Preference number: 5 (lower is better)
Translates to: SRGPWPLGACPHPSA*CPGWNTGGRCRPHP
Trigger: GGGGTGTGGACGGCAACGTCCGCCTGTATTCCATCCTGGGCACCACGCTGAAGGATGAGGGCAAGCTCCTAGAGGCCAAGGGCCCCGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
ENST00000502962.5
ENST00000515743.5
CDS CCA 90 bp CAGCCAACCAGCGGGGCTGCAGCAGTCTCAGTCCAGCCTCATCCCTaGTGGACAACTGACGGTGTCCGGTCCACACTCCTGCCTGTCCTC +
Preference number: 5 (lower is better)
Translates to: QPTSGAAAVSVQPHP*WTTDGVRSTLLPVL
Trigger: GAGGACAGGCAGGAGTGTGGACCGGACACCGTCAGTTGTCCACCAGGGATGAGGCTGGACTGAGACTGCTGCAGCCCCGCTGGTTGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515743.5
CDS CCA 90 bp CGCTTCCTTGGCCAGCACAGCCTCGCCTTGCCGCTGACTTCGCACTaGCTCCTCCAAGCCAGCCTGAGCTTCCTTGAAGTGCAGTGGGCC +
Preference number: 5 (lower is better)
Translates to: RFLGQHSLALPLTSH*LLQASLSFLEVQWA
Trigger: GGCCCACTGCACTTCAAGGAAGCTCAGGCTGGCTTGGAGGAGCCAGTGCGAAGTCAGCGGCAAGGCGAGGCTGTGCTGGCCAAGGAAGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515743.5
CDS CCA 90 bp AGGCCTTCACTCAGCTCAGCAGGTGTCCTGTGCATGGGGCCCCCGTaGTCCCTCAGTACGGCCAGCAGCGCAGCTGGTGTTTGCTGGATG +
Preference number: 5 (lower is better)
Translates to: RPSLSSAGVLCMGPP*SLSTASSAAGVCWM
Trigger: CATCCAGCAAACACCAGCTGCGCTGCTGGCCGTACTGAGGGACCACGGGGGCCCCATGCACAGGACACCTGCTGAGCTGAGTGAAGGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515743.5
CDS-3UTR CAA 90 bp CAGACACCCTGCAGAGACGAGGGTCATGACTGGGCCCTCCTGCCTCTTGTGGTGTCGCCGCCGATGATCTaGGAGACGCCCCTCTCCACC +
Preference number: 5 (lower is better)
Translates to: QTPCRDEGHDWALLPLVVSPPMI*ETPLST
Trigger: GGTGGAGAGGGGCGTCTCCAAGATCATCGGCGGCGA...CACCACAAGAGGCAGGAGGGCCCAGTCATGACCCTCGTCTCTGCAGGGTGTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS GCA 90 bp CCCTTAGGGTCGCCGCCGATGATCTTGGAGACGCCCCTCTCCACCTaGGGGAGGCTGGCGAACACCTTCTTGATCTCGTACGGCATCCTC +
Preference number: 5 (lower is better)
Translates to: PLGSPPMILETPLST*GRLANTFLISYGIL
Trigger: GAGGATGCCGTACGAGATCAAGAAGGTGTTCGCCAGCCTCCCGCAGGTGGAGAGGGGCGTCTCCAAGATCATCGGCGGCGACCCTAAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
ENST00000509600.1
CDS GCA 90 bp GGTGCTGTCGGGACTCCAATGCGTAAATCCCACCGTCGTGGGCCTTaGTTCCGCCCAGCGCGCACACCTTCTCCCCAGTCTTCCCGTCAT +
Preference number: 5 (lower is better)
Translates to: GAVGTPMRKSHRRGP*FRPARTPSPQSSRH
Trigger: ATGACGGGAAGACTGGGGAGAAGGTGTGCGCGCTGGGCGGAAGCAAGGCCCACGACGGTGGGATTTACGCATTGGAGTCCCGACAGCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509695.1
ENST00000515743.5
CDS GCA 90 bp CATTCCCTGTGTCAAAGGGCCTCACAGGGCAGTTCCCGAGAGAGCTaGAGGAAGGAGCCGGCTGCAGTGAAGGCAGTGGTGGGAGGGCCT +
Preference number: 5 (lower is better)
Translates to: HSLCQRASQGSSRES*RKEPAAVKAVVGGP
Trigger: AGGCCCTCCCACCACTGCCTTCACTGCAGCCGGCTCCTTCCTGCAGCTCTCTCGGGAACTGCCCTGTGAGGCCCTTTGACACAGGGAATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515743.5
CDS GCA 90 bp CCCCTGCCTGGCACGGCATACATCCTGATGAAGGAAGCCTTGGCCTaGGGGTGGCACAGGTGCCCAGGAGCGCCTTCAACCACCAAGCAT +
Preference number: 5 (lower is better)
Translates to: PLPGTAYILMKEALA*GWHRCPGAPSTTKH
Trigger: ATGCTTGGTGGTTGAAGGCGCTCCTGGGCACCTGTGCCACCCGCAGGCCAAGGCTTCCTTCATCAGGATGTATGCCGTGCCAGGCAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515743.5
CDS CCA 90 bp GCACACGACCACGGCGTATCCCCCGGGGCCGACGGCTACGCACTTTaGCTGAACGTCCAGTTTCACAACTCCTTGTCCGCTGTAGTCCCG +
Preference number: 5 (lower is better)
Translates to: AHDHGVSPGADGYAL*LNVQFHNSLSAVVP
Trigger: CGGGACTACAGCGGACAAGGAGTTGTGAAACTGGACGTTCAGCCAAAGTGCGTAGCCGTCGGCCCCGGGGGATACGCCGTGGTCGTGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
ENST00000502962.5
ENST00000515743.5
CDS CCA 90 bp AATCCAAGTCTGTGGTTCACCTCTGCCGACGCCTCCCACAGGCTCTaGCAGGGTGGTGTCATGTGTCCCTCCCTGGCCCCAGAACCCAGC +
Preference number: 5 (lower is better)
Translates to: NPSLWFTSADASHRL*QGGVMCPSLAPEPS
Trigger: GCTGGGTTCTGGGGCCAGGGAGGGACACATGACACCACCCTGCCAGAGCCTGTGGGAGGCGTCGGCAGAGGTGAACCACAGACTTGGATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515743.5
CDS CCA 90 bp ATCTGGTCTCCAGTTTCCTGTCCAGAGCTCTCGTCTCAGCTGCGCTaGCTCCTGGGCCTTGGGCAGCTGCTCAGCAAGCCTGGGGGTGCT +
Preference number: 5 (lower is better)
Translates to: IWSPVSCPELSSQLR*LLGLGQLLSKPGGA
Trigger: AGCACCCCCAGGCTTGCTGAGCAGCTGCCCAAGGCCCAGGAGCCAGCGCAGCTGAGACGAGAGCTCTGGACAGGAAACTGGAGACCAGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515743.5
CDS CCA 90 bp CCCCCGTGGTCCCTCAGTACGGCCAGCAGCGCAGCTGGTGTTTGCTaGATGGAAGGAGACCCACAACTCTTCCGGGCCACCTGTCTTGGA +
Preference number: 5 (lower is better)
Translates to: PPWSLSTASSAAGVC*MEGDPQLFRATCLG
Trigger: TCCAAGACAGGTGGCCCGGAAGAGTTGTGGGTCTCCTTCCATCCAGCAAACACCAGCTGCGCTGCTGGCCGTACTGAGGGACCACGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515743.5
CDS-3UTR CAA 90 bp TCAGAAGAACGTGTACAGACACCCTGCAGAGACGAGGGTCATGACTGGGCCCTCGGCATCCTCGCCCACTaGTTACCGCGCCGCGCTCGC +
Preference number: 5 (lower is better)
Translates to: SEERVQTPCRDEGHDWALGILAH*LPRRAR
Trigger: GCGAGCGCGGCGCGGTAACAAGTGGGCGAGGATGCC...GAGGGCCCAGTCATGACCCTCGTCTCTGCAGGGTGTCTGTACACGTTCTTCTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR CAA 90 bp GGGGGCATGGGGGCGCGTCACAGAAATAGAGAAATGACATGTTCCGCTGCAGTTCCACCGTCGTGGGCCTaGCTTCCGCCCAGCGCGCAC +
Preference number: 5 (lower is better)
Translates to: GGMGARHRNREMTCSAAVPPSWA*LPPSAH
Trigger: GTGCGCGCTGGGCGGAAGCAAGGCCCACGACGGTGG...AACTGCAGCGGAACATGTCATTTCTCTATTTCTGTGACGCGCCCCCATGCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR CAA 90 bp CAGACACCCTGCAGAGACGAGGGTCATGACTGGGCCCTCCTGCCTCTTGTGGTGAACACTGTGACCACCTaGCTGGCGTCGCACACCGCG +
Preference number: 5 (lower is better)
Translates to: QTPCRDEGHDWALLPLVVNTVTT*LASHTA
Trigger: CGCGGTGTGCGACGCCAGCAAGGTGGTCACAGTGTT...CACCACAAGAGGCAGGAGGGCCCAGTCATGACCCTCGTCTCTGCAGGGTGTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS GCA 90 bp AGGCTGGTGTACCGCACGGTGTCGTCCATGCTGCAGCTGATGAGCTaGCCCGACTCATCCACGGTCATCCTGGACACCTGGTTCGTGTGG +
Preference number: 5 (lower is better)
Translates to: RLVYRTVSSMLQLMS*PDSSTVILDTWFVW
Trigger: CCACACGAACCAGGTGTCCAGGATGACCGTGGATGAGTCGGGGCAGCTCATCAGCTGCAGCATGGACGACACCGTGCGGTACACCAGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
ENST00000502962.5
ENST00000515743.5
CDS GCA 90 bp TCGCGCAAACCCCAGGACCCCAAATCCAAGTCTGTGGTTCACCTCTaGCGACGCCTCCCACAGGCTCTGGCAGGGTGGTGTCATGTGTCC +
Preference number: 5 (lower is better)
Translates to: SRKPQDPKSKSVVHL*RRLPQALAGWCHVS
Trigger: GGACACATGACACCACCCTGCCAGAGCCTGTGGGAGGCGTCGGCAGAGGTGAACCACAGACTTGGATTTGGGGTCCTGGGGTTTGCGCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515743.5
CDS CCA 90 bp CAGCTGATGAGCTGCCCCGACTCATCCACGGTCATCCTGGACACCTaGTTCGTGTGGCCTTTCCCAGCGAAGGAGTCGTTCTCCCCCGTC +
Preference number: 5 (lower is better)
Translates to: QLMSCPDSSTVILDT*FVWPFPAKESFSPV
Trigger: GACGGGGGAGAACGACTCCTTCGCTGGGAAAGGCCACACGAACCAGGTGTCCAGGATGACCGTGGATGAGTCGGGGCAGCTCATCAGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
ENST00000502962.5
ENST00000515743.5
CDS CCA 90 bp TGGCCTCTAGGAGCTTGCCCTCATCCTTCAGCGTGGTGCCCAGGATaGAATACAGGCGGACGTTGCCGTCCACACCCCCAATTGCCACCG +
Preference number: 5 (lower is better)
Translates to: WPLGACPHPSAWCPG*NTGGRCRPHPQLPP
Trigger: CGGTGGCAATTGGGGGTGTGGACGGCAACGTCCGCCTGTATTCCATCCTGGGCACCACGCTGAAGGATGAGGGCAAGCTCCTAGAGGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
ENST00000502962.5
ENST00000515743.5
CDS CCA 90 bp GACATTCCTGCTCGCGCAAACCCCAGGACCCCAAATCCAAGTCTGTaGTTCACCTCTGCCGACGCCTCCCACAGGCTCTGGCAGGGTGGT +
Preference number: 5 (lower is better)
Translates to: DIPARANPRTPNPSL*FTSADASHRLWQGG
Trigger: ACCACCCTGCCAGAGCCTGTGGGAGGCGTCGGCAGAGGTGAACCACAGACTTGGATTTGGGGTCCTGGGGTTTGCGCGAGCAGGAATGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515743.5
CDS CCA 90 bp TCTGACCAGCACATCGAGTTCTCTCGCTGCCGAACTCCGCTTCCTTaGCCAGCACAGCCTCGCCTTGCCGCTGACTTCGCACTGGCTCCT +
Preference number: 5 (lower is better)
Translates to: SDQHIEFSRCRTPLP*PAQPRLAADFALAP
Trigger: AGGAGCCAGTGCGAAGTCAGCGGCAAGGCGAGGCTGTGCTGGCCAAGGAAGCGGAGTTCGGCAGCGAGAGAACTCGATGTGCTGGTCAGA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515743.5
CDS-3UTR CAA 90 bp GGTGACCAGGACACCTCGGTCTGGCTAACAAGGGTTCTAAAAACTTGGACACGGCCACCGTCGTGGGCCTaGCTTCCGCCCAGCGCGCAC +
Preference number: 5 (lower is better)
Translates to: GDQDTSVWLTRVLKTWTRPPSWA*LPPSAH
Trigger: GTGCGCGCTGGGCGGAAGCAAGGCCCACGACGGTGG...CCGTGTCCAAGTTTTTAGAACCCTTGTTAGCCAGACCGAGGTGTCCTGGTCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CAA 90 bp GGGGGCATGGGGGCGCGTCACAGAAATAGAGAAATGACATGTTCCGCTGCAGTTCGTCCACACCCCCAATaGCCACCGTGTCCCCGCCGG +
Preference number: 5 (lower is better)
Translates to: GGMGARHRNREMTCSAAVRPHPQ*PPCPRR
Trigger: CCGGCGGGGACACGGTGGCAATTGGGGGTGTGGACG...AACTGCAGCGGAACATGTCATTTCTCTATTTCTGTGACGCGCCCCCATGCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS GCA 90 bp AGGGAGACACTGAGCAGGTGGTCCTTCTGCCATAGGCAGCCCAGCTaGTGGTCCAGAACCGTGGAGCCCATGGGAAATGTGCTGACCACG +
Preference number: 5 (lower is better)
Translates to: RETLSRWSFCHRQPS*WSRTVEPMGNVLTT
Trigger: CGTGGTCAGCACATTTCCCATGGGCTCCACGGTTCTGGACCAGCAGCTGGGCTGCCTATGGCAGAAGGACCACCTGCTCAGTGTCTCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
ENST00000502962.5
ENST00000504739.5
ENST00000505543.5
ENST00000506246.5
ENST00000508949.5
ENST00000515743.5
CDS GCA 90 bp GTGGTAGCCACAAGAGCAGAGTCTGAGAGCTGCCGCGTGTTCAGCTaGATACAGGGAGCCTCCCTATGCTTTCACCTGCCCAGCCAGGCC +
Preference number: 5 (lower is better)
Translates to: VVATRAESESCRVFS*IQGASLCFHLPSQA
Trigger: GGCCTGGCTGGGCAGGTGAAAGCATAGGGAGGCTCCCTGTATGCAGCTGAACACGCGGCAGCTCTCAGACTCTGCTCTTGTGGCTACCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505543.5
ENST00000508949.5
CDS CCA 90 bp GAGACACTGAGCAGGTGGTCCTTCTGCCATAGGCAGCCCAGCTGCTaGTCCAGAACCGTGGAGCCCATGGGAAATGTGCTGACCACGGAG +
Preference number: 5 (lower is better)
Translates to: ETLSRWSFCHRQPSC*SRTVEPMGNVLTTE
Trigger: CTCCGTGGTCAGCACATTTCCCATGGGCTCCACGGTTCTGGACCAGCAGCTGGGCTGCCTATGGCAGAAGGACCACCTGCTCAGTGTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
ENST00000502962.5
ENST00000504739.5
ENST00000505543.5
ENST00000506246.5
ENST00000508949.5
ENST00000515743.5
CDS CCA 90 bp AGCTGCCCCGACTCATCCACGGTCATCCTGGACACCTGGTTCGTGTaGCCTTTCCCAGCGAAGGAGTCGTTCTCCCCCGTCTCTGAATCC +
Preference number: 5 (lower is better)
Translates to: SCPDSSTVILDTWFV*PFPAKESFSPVSES
Trigger: GGATTCAGAGACGGGGGAGAACGACTCCTTCGCTGGGAAAGGCCACACGAACCAGGTGTCCAGGATGACCGTGGATGAGTCGGGGCAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
ENST00000502962.5
ENST00000515743.5
CDS CCA 90 bp CCTGGCACGGCATACATCCTGATGAAGGAAGCCTTGGCCTGCGGGTaGCACAGGTGCCCAGGAGCGCCTTCAACCACCAAGCATGACTTG +
Preference number: 5 (lower is better)
Translates to: PGTAYILMKEALACG*HRCPGAPSTTKHDL
Trigger: CAAGTCATGCTTGGTGGTTGAAGGCGCTCCTGGGCACCTGTGCCACCCGCAGGCCAAGGCTTCCTTCATCAGGATGTATGCCGTGCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515743.5
CDS-3UTR CAA 90 bp AGACACCCTGCAGAGACGAGGGTCATGACTGGGCCCTCCTGCCTCTTGTGGTGGATGACGTGCAGGGGCTaGCTGGGGTTGTTTCTGTCC +
Preference number: 5 (lower is better)
Translates to: RHPAETRVMTGPSCLLWWMTCRG*LGLFLS
Trigger: GGACAGAAACAACCCCAGCAAGCCCCTGCACGTCAT...CCACCACAAGAGGCAGGAGGGCCCAGTCATGACCCTCGTCTCTGCAGGGTGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS CCA 90 bp CGTGGTCCCTCAGTACGGCCAGCAGCGCAGCTGGTGTTTGCTGGATaGAAGGAGACCCACAACTCTTCCGGGCCACCTGTCTTGGATCTT +
Preference number: 5 (lower is better)
Translates to: RGPSVRPAAQLVFAG*KETHNSSGPPVLDL
Trigger: AAGATCCAAGACAGGTGGCCCGGAAGAGTTGTGGGTCTCCTTCCATCCAGCAAACACCAGCTGCGCTGCTGGCCGTACTGAGGGACCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515743.5
CDS-3UTR CAA 90 bp TATTCCCTCTTCTCACTAGTACAGAAATGTTCTGCAGGCAGGAACATGAGCCCCCCCTGCGCGCTGTGGTaGCGGACGCCCCGAACCCGG +
Preference number: 5 (lower is better)
Translates to: YSLFSLVQKCSAGRNMSPPCALW*RTPRTR
Trigger: CCGGGTTCGGGGCGTCCGCAACCACAGCGCGCAGGG...GGGGCTCATGTTCCTGCCTGCAGAACATTTCTGTACTAGTGAGAAGAGGGAATA
60% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000382451.6
ENST00000382452.6
CDS-3UTR CAA 90 bp CAGACACCCTGCAGAGACGAGGGTCATGACTGGGCCCTCCTGCCTCTTGTGGTGGTGTACAGAAAATTGTaGCCCTTAGGGTCGCCGCCG +
Preference number: 5 (lower is better)
Translates to: QTPCRDEGHDWALLPLVVVYRKL*PLGSPP
Trigger: CGGCGGCGACCCTAAGGGCAACAATTTTCTGTACAC...CACCACAAGAGGCAGGAGGGCCCAGTCATGACCCTCGTCTCTGCAGGGTGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR CAA 90 bp CAGACACCCTGCAGAGACGAGGGTCATGACTGGGCCCTCCTGCCTCTTGTGGTGGAGAATCGCACACAGTaGACAAAGCGGCTGTGGTCG +
Preference number: 5 (lower is better)
Translates to: QTPCRDEGHDWALLPLVVENRTQ*TKRLWS
Trigger: CGACCACAGCCGCTTTGTCAACTGTGTGCGATTCTC...CACCACAAGAGGCAGGAGGGCCCAGTCATGACCCTCGTCTCTGCAGGGTGTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS TCA 90 bp ACAGGTGCCCAGGAGCGCCTTCAACCACCAAGCATGACTTGGCTGTaGGGCCAGGCTTTAGCACTCTGTCCACATCACCAGGCTGGCTCT +
Preference number: 5 (lower is better)
Translates to: TGAQERLQPPSMTWL*GQALALCPHHQAGS
Trigger: AGAGCCAGCCTGGTGATGTGGACAGAGTGCTAAAGCCTGGCCTCACAGCCAAGTCATGCTTGGTGGTTGAAGGCGCTCCTGGGCACCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515743.5
CDS GCA 90 bp TCTTGCCTCCACCCAACCGAGATGCCAATAGTGAGACGGTGCCTGTaGGCTTATGGCTCCTCTGTGGCTAGCTCTGCCCATGAAGCCCAG +
Preference number: 5 (lower is better)
Translates to: SCLHPTEMPIVRRCL*AYGSSVASSAHEAQ
Trigger: CTGGGCTTCATGGGCAGAGCTAGCCACAGAGGAGCCATAAGCGCACAGGCACCGTCTCACTATTGGCATCTCGGTTGGGTGGAGGCAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515743.5
CDS CCA 90 bp TCCTCAGCTTCCCAGACACATCTCCGGAGGCAATGTAGAATCCGCTaGGCGCATACTTGGCCACCACCACCTGATGGGCGTGCTCTGTGT +
Preference number: 5 (lower is better)
Translates to: SSASQTHLRRQCRIR*AHTWPPPPDGRALC
Trigger: ACACAGAGCACGCCCATCAGGTGGTGGTGGCCAAGTATGCGCCCAGCGGATTCTACATTGCCTCCGGAGATGTGTCTGGGAAGCTGAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264785.11
ENST00000382452.6
ENST00000499869.7
ENST00000505851.5
ENST00000508079.1
ENST00000514319.5
ENST00000515018.1
CDS CCA 90 bp CCGTCGGGGTTAGCCGATGGGGTCCACCTCCTATCTGTGTCAACATaGCCCACGGTCCCTTGTCCATGTCAGTCCATAGGGTCCACATTC +
Preference number: 5 (lower is better)
Translates to: PSGLADGVHLLSVST*PTVPCPCQSIGSTF
Trigger: GAATGTGGACCCTATGGACTGACATGGACAAGGGACCGTGGGCCATGTTGACACAGATAGGAGGTGGACCCCATCGGCTAACCCCGACGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515743.5
CDS-3UTR CAA 90 bp CTAAAGCTTTCAGAAGAACGTGTACAGACACCCTGCAGAGACGAGGGTCATGACGGCATCCTCGCCCACTaGTTACCGCGCCGCGCTCGC +
Preference number: 5 (lower is better)
Translates to: LKLSEERVQTPCRDEGHDGILAH*LPRRAR
Trigger: GCGAGCGCGGCGCGGTAACAAGTGGGCGAGGATGCC...GTCATGACCCTCGTCTCTGCAGGGTGTCTGTACACGTTCTTCTGAAAGCTTTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR CAA 90 bp AACGGTGACCAGGACACCTCGGTCTGGCTAACAAGGGTTCTAAAAACTTGGACACGTCCACACCCCCAATaGCCACCGTGTCCCCGCCGG +
Preference number: 5 (lower is better)
Translates to: NGDQDTSVWLTRVLKTWTRPHPQ*PPCPRR
Trigger: CCGGCGGGGACACGGTGGCAATTGGGGGTGTGGACG...TGTCCAAGTTTTTAGAACCCTTGTTAGCCAGACCGAGGTGTCCTGGTCACCGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CAA 90 bp TATCCAGGGGTTGTGTGTCCCCATCTGATCTGGAGGTGGCGCTCTGAAGGCAGCGAGGCAAAGTGTTCATaGTCTGGGGACCAGGCCAGG +
Preference number: 5 (lower is better)
Translates to: YPGVVCPHLIWRWRSEGSEAKCS*SGDQAR
Trigger: CCTGGCCTGGTCCCCAGACAATGAACACTTTGCCTC...GCTGCCTTCAGAGCGCCACCTCCAGATCAGATGGGGACACACAACCCCTGGATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CAA 90 bp AGACACCCTGCAGAGACGAGGGTCATGACTGGGCCCTCCTGCCTCTTGTGGTGGCAGCCGGTGTGCATCTaGGATCTTGACTCTGGTTTC +
Preference number: 5 (lower is better)
Translates to: RHPAETRVMTGPSCLLWWQPVCI*DLDSGF
Trigger: GAAACCAGAGTCAAGATCCAAGATGCACACCGGCTG...CCACCACAAGAGGCAGGAGGGCCCAGTCATGACCCTCGTCTCTGCAGGGTGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR CAA 90 bp TCAGAAGAACGTGTACAGACACCCTGCAGAGACGAGGGTCATGACTGGGCCCTCGGGGCTCTGTGTGCTTaGGAGGCTACTGCCTCTGGA +
Preference number: 5 (lower is better)
Translates to: SEERVQTPCRDEGHDWALGALCA*EATASG
Trigger: TCCAGAGGCAGTAGCCTCCAAAGCACACAGAGCCCC...GAGGGCCCAGTCATGACCCTCGTCTCTGCAGGGTGTCTGTACACGTTCTTCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS TCA 90 bp AAAGCGGCTGTGGTCCCATTAGGTGGTAGCCACAAGAGCAGAGTCTaGGAGCTGCCGCGTGTTCAGCTGCATACAGGGAGCCTCCCTATG +
Preference number: 5 (lower is better)
Translates to: KAAVVPLGGSHKSRV*ELPRVQLHTGSLPM
Trigger: CATAGGGAGGCTCCCTGTATGCAGCTGAACACGCGGCAGCTCTCAGACTCTGCTCTTGTGGCTACCACCTAATGGGACCACAGCCGCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508949.5
CDS GCA 90 bp CCAAAGCTGGGCTACGGTCCCTCAGGACGAGGGGCACACAGGGAATaGTGCTTGCATTTCAGCTCAGGCACAGCATCATGGAGTTCTGCT +
Preference number: 5 (lower is better)
Translates to: PKLGYGPSGRGAHRE*CLHFSSGTASWSSA
Trigger: AGCAGAACTCCATGATGCTGTGCCTGAGCTGAAATGCAAGCAGCATTCCCTGTGTGCCCCTCGTCCTGAGGGACCGTAGCCCAGCTTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509695.1
CDS CCA 90 bp CTCCCATCTTCCTGGAGCCTCATTCAGGCAAATGAAGACCAAAGCTaGGCTACGGTCCCTCAGGACGAGGGGCACACAGGGAATGCTGCT +
Preference number: 5 (lower is better)
Translates to: LPSSWSLIQANEDQS*ATVPQDEGHTGNAA
Trigger: AGCAGCATTCCCTGTGTGCCCCTCGTCCTGAGGGACCGTAGCCCAGCTTTGGTCTTCATTTGCCTGAATGAGGCTCCAGGAAGATGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509695.1
CDS-3UTR CAA 90 bp TATTCCCTCTTCTCACTAGTACAGAAATGTTCTGCAGGCAGGAACATGAGCCCCGGCATCCTCGCCCACTaGTTACCGCGCCGCGCTCGC +
Preference number: 5 (lower is better)
Translates to: YSLFSLVQKCSAGRNMSPGILAH*LPRRAR
Trigger: GCGAGCGCGGCGCGGTAACAAGTGGGCGAGGATGCC...GGGGCTCATGTTCCTGCCTGCAGAACATTTCTGTACTAGTGAGAAGAGGGAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CAA 90 bp TATCCAGGGGTTGTGTGTCCCCATCTGATCTGGAGGTGGCGCTCTGAAGGCAGCGTGTACAGAAAATTGTaGCCCTTAGGGTCGCCGCCG +
Preference number: 5 (lower is better)
Translates to: YPGVVCPHLIWRWRSEGSVYRKL*PLGSPP
Trigger: CGGCGGCGACCCTAAGGGCAACAATTTTCTGTACAC...GCTGCCTTCAGAGCGCCACCTCCAGATCAGATGGGGACACACAACCCCTGGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CAA 90 bp TCAGAAGAACGTGTACAGACACCCTGCAGAGACGAGGGTCATGACTGGGCCCTCATGACGTGCAGGGGCTaGCTGGGGTTGTTTCTGTCC +
Preference number: 5 (lower is better)
Translates to: SEERVQTPCRDEGHDWALMTCRG*LGLFLS
Trigger: GGACAGAAACAACCCCAGCAAGCCCCTGCACGTCAT...GAGGGCCCAGTCATGACCCTCGTCTCTGCAGGGTGTCTGTACACGTTCTTCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR CAA 90 bp TATCCAGGGGTTGTGTGTCCCCATCTGATCTGGAGGTGGCGCTCTGAAGGCAGCCAGTTTCACAACTCCTaGTCCGCTGTAGTCCCGCAG +
Preference number: 5 (lower is better)
Translates to: YPGVVCPHLIWRWRSEGSQFHNS*SAVVPQ
Trigger: CTGCGGGACTACAGCGGACAAGGAGTTGTGAAACTG...GCTGCCTTCAGAGCGCCACCTCCAGATCAGATGGGGACACACAACCCCTGGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CAA 90 bp AACGGTGACCAGGACACCTCGGTCTGGCTAACAAGGGTTCTAAAAACTTGGACATCGGTCACGGGGCCCTaGGCCTCTAGGAGCTTGCCC +
Preference number: 5 (lower is better)
Translates to: NGDQDTSVWLTRVLKTWTSVTGP*ASRSLP
Trigger: GGGCAAGCTCCTAGAGGCCAAGGGCCCCGTGACCGA...TGTCCAAGTTTTTAGAACCCTTGTTAGCCAGACCGAGGTGTCCTGGTCACCGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS TCA 90 bp GGTGCACTGCCACAACTTCGGGCTCGTAGCCGGGGTTGTCGATGCTaGAGCACTTCCTCTGATCCTTCAGCAGGACAATCTGTCCAATGC +
Preference number: 5 (lower is better)
Translates to: GALPQLRARSRGCRC*STSSDPSAGQSVQC
Trigger: GCATTGGACAGATTGTCCTGCTGAAGGATCAGAGGAAGTGCTTCAGCATCGACAACCCCGGCTACGAGCCCGAAGTTGTGGCAGTGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
ENST00000502962.5
ENST00000515743.5
CDS TCA 90 bp GTCTCCACTACCTACCCATTAGGTGGTAGCCACAAGAGCAGAGTCTaGGAGCTGCCGCGTGTTCAGCTGCATACAGGGAGCCTCCCTATG +
Preference number: 5 (lower is better)
Translates to: VSTTYPLGGSHKSRV*ELPRVQLHTGSLPM
Trigger: CATAGGGAGGCTCCCTGTATGCAGCTGAACACGCGGCAGCTCTCAGACTCTGCTCTTGTGGCTACCACCTAATGGGTAGGTAGTGGAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505543.5
CDS TCA 90 bp CAGCAAGGGCTGGGTTTTTCCTATGTCCTCCCAGTCTCAGGTGGGTaGCGGAGGGGCCAGAGGTCACTACTCCAATTTACAGGTAGGCTG +
Preference number: 5 (lower is better)
Translates to: QQGLGFSYVLPVSGG*RRGQRSLLQFTGRL
Trigger: CAGCCTACCTGTAAATTGGAGTAGTGACCTCTGGCCCCTCCGTCACCCACCTGAGACTGGGAGGACATAGGAAAAACCCAGCCCTTGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514319.5
CDS GCA 90 bp GTCGCCAATTGTGAACTTGAACTTGAATGGGGGTCCCTCAAAGAATaGCGCGCAGTTATCATCGCTTCCCGTGGCCAGCCGGTATGGCCG +
Preference number: 5 (lower is better)
Translates to: VANCELELEWGSLKE*RAVIIASRGQPVWP
Trigger: CGGCCATACCGGCTGGCCACGGGAAGCGATGATAACTGCGCGGCATTCTTTGAGGGACCCCCATTCAAGTTCAAGTTCACAATTGGCGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382452.6
ENST00000499869.7
ENST00000508079.1
CDS GCA 90 bp TGGTTTCCGGGTCACTCAGGGTCCAAACATACACCATCATGTCCATaGCACCGGAGGCAAAGTGTTCATTGTCTGGGGACCAGGCCAGGC +
Preference number: 5 (lower is better)
Translates to: WFPGHSGSKHTPSCP*HRRQSVHCLGTRPG
Trigger: GCCTGGCCTGGTCCCCAGACAATGAACACTTTGCCTCCGGTGGCATGGACATGATGGTGTATGTTTGGACCCTGAGTGACCCGGAAACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
ENST00000502962.5
ENST00000515743.5
CDS GCA 90 bp TGGGCTACGGTCCCTCAGGACGAGGGGCACACAGGGAATGCTGCTTaGATTTCAGCTCAGGCACAGCATCATGGAGTTCTGCTTCAGCTT +
Preference number: 5 (lower is better)
Translates to: WATVPQDEGHTGNAA*ISAQAQHHGVLLQL
Trigger: AAGCTGAAGCAGAACTCCATGATGCTGTGCCTGAGCTGAAATGCAAGCAGCATTCCCTGTGTGCCCCTCGTCCTGAGGGACCGTAGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509695.1
CDS GCA 90 bp AAGCTGGGCTACGGTCCCTCAGGACGAGGGGCACACAGGGAATGCTaGTTGCATTTCAGCTCAGGCACAGCATCATGGAGTTCTGCTTCA +
Preference number: 5 (lower is better)
Translates to: KLGYGPSGRGAHREC*LHFSSGTASWSSAS
Trigger: TGAAGCAGAACTCCATGATGCTGTGCCTGAGCTGAAATGCAAGCAGCATTCCCTGTGTGCCCCTCGTCCTGAGGGACCGTAGCCCAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509695.1
CDS GCA 90 bp GGACATTCCTACTCCAGTTCCAGGTCCCAGAAGCGAGGACATTCCTaGTCGCGCAAACCCCAGGACCCCAAATCCAAGTCTGTGGTTCAC +
Preference number: 5 (lower is better)
Translates to: GHSYSSSRSQKRGHS*SRKPQDPKSKSVVH
Trigger: GTGAACCACAGACTTGGATTTGGGGTCCTGGGGTTTGCGCGAGCAGGAATGTCCTCGCTTCTGGGACCTGGAACTGGAGTAGGAATGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515743.5
CDS CCA 90 bp CAGACACATCTCCGGAGGCAATGTAGAATCCGCTGGGCGCATACTTaGCCACCACCACCTGATGGGCGTGCTCTGTGTAGATGTCAGCAA +
Preference number: 5 (lower is better)
Translates to: QTHLRRQCRIRWAHT*PPPPDGRALCRCQQ
Trigger: TTGCTGACATCTACACAGAGCACGCCCATCAGGTGGTGGTGGCCAAGTATGCGCCCAGCGGATTCTACATTGCCTCCGGAGATGTGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264785.11
ENST00000382452.6
ENST00000499869.7
ENST00000505851.5
ENST00000508079.1
ENST00000514319.5
ENST00000515018.1
CDS CCA 90 bp GCTGTGGTCCCTGCTCTGCAGTGCCTCCACCCTAGCGAAGAAACATaGCCTGAAGCCACAGCCTTCAATACAGCTCCCAAAATAGCCAGG +
Preference number: 5 (lower is better)
Translates to: AVVPALQCLHPSEET*PEATAFNTAPKIAR
Trigger: CCTGGCTATTTTGGGAGCTGTATTGAAGGCTGTGGCTTCAGGCCATGTTTCTTCGCTAGGGTGGAGGCACTGCAGAGCAGGGACCACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505543.5
CDS CCA 90 bp GGTCACTACTCCAATTTACAGGTAGGCTGTGATGACCCTGGGTCCTaGGGCTTGGGTCTCAAGGCTTGCCACTGGTATCTCAGCTCCTGG +
Preference number: 5 (lower is better)
Translates to: GHYSNLQVGCDDPGS*GLGLKACHWYLSSW
Trigger: CCAGGAGCTGAGATACCAGTGGCAAGCCTTGAGACCCAAGCCCCAGGACCCAGGGTCATCACAGCCTACCTGTAAATTGGAGTAGTGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514319.5
CDS-3UTR CAA 90 bp CTAAAGCTTTCAGAAGAACGTGTACAGACACCCTGCAGAGACGAGGGTCATGACTCGCCGCCGATGATCTaGGAGACGCCCCTCTCCACC +
Preference number: 5 (lower is better)
Translates to: LKLSEERVQTPCRDEGHDSPPMI*ETPLST
Trigger: GGTGGAGAGGGGCGTCTCCAAGATCATCGGCGGCGA...GTCATGACCCTCGTCTCTGCAGGGTGTCTGTACACGTTCTTCTGAAAGCTTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR CAA 90 bp GTTCAACACAGAATTCCGGCTTTGCTGAACTGCAATGCATATTCCCTCTTCTCACCACCGTCGTGGGCCTaGCTTCCGCCCAGCGCGCAC +
Preference number: 5 (lower is better)
Translates to: VQHRIPALLNCNAYSLFSPPSWA*LPPSAH
Trigger: GTGCGCGCTGGGCGGAAGCAAGGCCCACGACGGTGG...TGAGAAGAGGGAATATGCATTGCAGTTCAGCAAAGCCGGAATTCTGTGTTGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CAA 90 bp GCAAACTGTTACTGTCTAAAGCTTTCAGAAGAACGTGTACAGACACCCTGCAGACCACCGTCGTGGGCCTaGCTTCCGCCCAGCGCGCAC +
Preference number: 5 (lower is better)
Translates to: ANCYCLKLSEERVQTPCRPPSWA*LPPSAH
Trigger: GTGCGCGCTGGGCGGAAGCAAGGCCCACGACGGTGG...TCTGCAGGGTGTCTGTACACGTTCTTCTGAAAGCTTTAGACAGTAACAGTTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR CAA 90 bp TCAGAAGAACGTGTACAGACACCCTGCAGAGACGAGGGTCATGACTGGGCCCTCCGACGGCTACGCACTTaGGCTGAACGTCCAGTTTCA +
Preference number: 5 (lower is better)
Translates to: SEERVQTPCRDEGHDWALRRLRT*AERPVS
Trigger: TGAAACTGGACGTTCAGCCAAAGTGCGTAGCCGTCG...GAGGGCCCAGTCATGACCCTCGTCTCTGCAGGGTGTCTGTACACGTTCTTCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR CAA 90 bp ACAAGGTGTGAGTCACACACTAGGGAGACAGACATCTGTTCAACACAGAATTCCCGTCCACACCCCCAATaGCCACCGTGTCCCCGCCGG +
Preference number: 5 (lower is better)
Translates to: TRCESHTRETDICSTQNSRPHPQ*PPCPRR
Trigger: CCGGCGGGGACACGGTGGCAATTGGGGGTGTGGACG...GGAATTCTGTGTTGAACAGATGTCTGTCTCCCTAGTGTGTGACTCACACCTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS TCA 90 bp AAATGTTCCTCCACTCCCATCTTCCTGGAGCCTCATTCAGGCAAATaGAGACCAAAGCTGGGCTACGGTCCCTCAGGACGAGGGGCACAC +
Preference number: 5 (lower is better)
Translates to: KCSSTPIFLEPHSGK*RPKLGYGPSGRGAH
Trigger: GTGTGCCCCTCGTCCTGAGGGACCGTAGCCCAGCTTTGGTCTTCATTTGCCTGAATGAGGCTCCAGGAAGATGGGAGTGGAGGAACATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509695.1
CDS GCA 90 bp GCGCAGTTATCATCGCTTCCCGTGGCCAGCCGGTATGGCCGGCTCTaGTTGATGTCCACGCTGTTGATGACTTTGTTGTGTCCTGTAATC +
Preference number: 5 (lower is better)
Translates to: AQLSSLPVASRYGRL*LMSTLLMTLLCPVI
Trigger: GATTACAGGACACAACAAAGTCATCAACAGCGTGGACATCAAGCAGAGCCGGCCATACCGGCTGGCCACGGGAAGCGATGATAACTGCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264785.11
ENST00000382452.6
ENST00000499869.7
ENST00000505851.5
ENST00000508079.1
CDS-3UTR CAA 90 bp TATCCAGGGGTTGTGTGTCCCCATCTGATCTGGAGGTGGCGCTCTGAAGGCAGCGTCCAAGCAATGTCTTaGATCTTCCCAGCGAAAGGC +
Preference number: 5 (lower is better)
Translates to: YPGVVCPHLIWRWRSEGSVQAMS*IFPAKG
Trigger: GCCTTTCGCTGGGAAGATCAAAGACATTGCTTGGAC...GCTGCCTTCAGAGCGCCACCTCCAGATCAGATGGGGACACACAACCCCTGGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CAA 90 bp GGGGGCATGGGGGCGCGTCACAGAAATAGAGAAATGACATGTTCCGCTGCAGTTCTGGCGAACACCTTCTaGATCTCGTACGGCATCCTC +
Preference number: 5 (lower is better)
Translates to: GGMGARHRNREMTCSAAVLANTF*ISYGIL
Trigger: GAGGATGCCGTACGAGATCAAGAAGGTGTTCGCCAG...AACTGCAGCGGAACATGTCATTTCTCTATTTCTGTGACGCGCCCCCATGCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR CAA 90 bp GGGGGCATGGGGGCGCGTCACAGAAATAGAGAAATGACATGTTCCGCTGCAGTTGTGTACAGAAAATTGTaGCCCTTAGGGTCGCCGCCG +
Preference number: 5 (lower is better)
Translates to: GGMGARHRNREMTCSAAVVYRKL*PLGSPP
Trigger: CGGCGGCGACCCTAAGGGCAACAATTTTCTGTACAC...AACTGCAGCGGAACATGTCATTTCTCTATTTCTGTGACGCGCCCCCATGCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR CAA 90 bp TATCCAGGGGTTGTGTGTCCCCATCTGATCTGGAGGTGGCGCTCTGAAGGCAGCTCGCCAATTGTGAACTaGAACTTGAATGGGGGTCCC +
Preference number: 5 (lower is better)
Translates to: YPGVVCPHLIWRWRSEGSSPIVN*NLNGGP
Trigger: GGGACCCCCATTCAAGTTCAAGTTCACAATTGGCGA...GCTGCCTTCAGAGCGCCACCTCCAGATCAGATGGGGACACACAACCCCTGGATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CAA 90 bp GGGGGCATGGGGGCGCGTCACAGAAATAGAGAAATGACATGTTCCGCTGCAGTTGAGAATCGCACACAGTaGACAAAGCGGCTGTGGTCG +
Preference number: 5 (lower is better)
Translates to: GGMGARHRNREMTCSAAVENRTQ*TKRLWS
Trigger: CGACCACAGCCGCTTTGTCAACTGTGTGCGATTCTC...AACTGCAGCGGAACATGTCATTTCTCTATTTCTGTGACGCGCCCCCATGCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR CAA 90 bp CAGGGGCTCTGTGTGCTTTGGAGGCTACTGCCTCTGGAATGTTTCGCATTCTCAATGACGTGCAGGGGCTaGCTGGGGTTGTTTCTGTCC +
Preference number: 5 (lower is better)
Translates to: QGLCVLWRLLPLECFAFSMTCRG*LGLFLS
Trigger: GGACAGAAACAACCCCAGCAAGCCCCTGCACGTCAT...TGAGAATGCGAAACATTCCAGAGGCAGTAGCCTCCAAAGCACACAGAGCCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CAA 90 bp GGGGGCATGGGGGCGCGTCACAGAAATAGAGAAATGACATGTTCCGCTGCAGTTCGACGGCTACGCACTTaGGCTGAACGTCCAGTTTCA +
Preference number: 5 (lower is better)
Translates to: GGMGARHRNREMTCSAAVRRLRT*AERPVS
Trigger: TGAAACTGGACGTTCAGCCAAAGTGCGTAGCCGTCG...AACTGCAGCGGAACATGTCATTTCTCTATTTCTGTGACGCGCCCCCATGCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR CAA 90 bp GGTGACCAGGACACCTCGGTCTGGCTAACAAGGGTTCTAAAAACTTGGACACGGTTGGCCTCTAGGAGCTaGCCCTCATCCTTCAGCGTG +
Preference number: 5 (lower is better)
Translates to: GDQDTSVWLTRVLKTWTRLASRS*PSSFSV
Trigger: CACGCTGAAGGATGAGGGCAAGCTCCTAGAGGCCAA...CCGTGTCCAAGTTTTTAGAACCCTTGTTAGCCAGACCGAGGTGTCCTGGTCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CAA 90 bp CTAAAGCTTTCAGAAGAACGTGTACAGACACCCTGCAGAGACGAGGGTCATGACAACACTGTGACCACCTaGCTGGCGTCGCACACCGCG +
Preference number: 5 (lower is better)
Translates to: LKLSEERVQTPCRDEGHDNTVTT*LASHTA
Trigger: CGCGGTGTGCGACGCCAGCAAGGTGGTCACAGTGTT...GTCATGACCCTCGTCTCTGCAGGGTGTCTGTACACGTTCTTCTGAAAGCTTTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS TCA 90 bp TCTCACTACCAGACTGGCGATTGCCTTATAAACCAGGACGGACGTTaGAACCTGCTTTGTCTCTCCTCCCTTCCAGACCGGGCTGCCTTC +
Preference number: 5 (lower is better)
Translates to: SHYQTGDCLINQDGR*NLLCLSSLPDRAAF
Trigger: GAAGGCAGCCCGGTCTGGAAGGGAGGAGAGACAAAGCAGGTTTCAACGTCCGTCCTGGTTTATAAGGCAATCGCCAGTCTGGTAGTGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515743.5
CDS GCA 90 bp TTCCCAGCGAAAGGCTGGTACTCATACTTCAACAGGTGCTCCTTCTaGGTGGTATCCCAGATCCTCAGCTTCCCAGACACATCTCCGGAG +
Preference number: 5 (lower is better)
Translates to: FPAKGWYSYFNRCSF*VVSQILSFPDTSPE
Trigger: CTCCGGAGATGTGTCTGGGAAGCTGAGGATCTGGGATACCACGCAGAAGGAGCACCTGTTGAAGTATGAGTACCAGCCTTTCGCTGGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264785.11
ENST00000382452.6
ENST00000499869.7
ENST00000505851.5
ENST00000508079.1
ENST00000514319.5
ENST00000515018.1
CDS CCA 90 bp CAGCGAAAGGCTGGTACTCATACTTCAACAGGTGCTCCTTCTGCGTaGTATCCCAGATCCTCAGCTTCCCAGACACATCTCCGGAGGCAA +
Preference number: 5 (lower is better)
Translates to: QRKAGTHTSTGAPSA*YPRSSASQTHLRRQ
Trigger: TTGCCTCCGGAGATGTGTCTGGGAAGCTGAGGATCTGGGATACCACGCAGAAGGAGCACCTGTTGAAGTATGAGTACCAGCCTTTCGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264785.11
ENST00000382452.6
ENST00000499869.7
ENST00000505851.5
ENST00000508079.1
ENST00000514319.5
ENST00000515018.1
CDS CCA 90 bp TCCTGGGGCTTGGGTCTCAAGGCTTGCCACTGGTATCTCAGCTCCTaGCCCACAGTGAACCTGATGGAACATGCTAGAAGGTTGGAGATA +
Preference number: 5 (lower is better)
Translates to: SWGLGLKACHWYLSS*PTVNLMEHARRLEI
Trigger: TATCTCCAACCTTCTAGCATGTTCCATCAGGTTCACTGTGGGCCAGGAGCTGAGATACCAGTGGCAAGCCTTGAGACCCAAGCCCCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514319.5
CDS-3UTR CAA 90 bp ATGCTCCACACATTGTTTAGGTGCTCGCTTTATTTTTCATGTGCAAACTGTTACCCCTGCGCGCTGTGGTaGCGGACGCCCCGAACCCGG +
Preference number: 5 (lower is better)
Translates to: MLHTLFRCSLYFSCANCYPCALW*RTPRTR
Trigger: CCGGGTTCGGGGCGTCCGCAACCACAGCGCGCAGGG...GTAACAGTTTGCACATGAAAAATAAAGCGAGCACCTAAACAATGTGTGGAGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000382451.6
ENST00000382452.6
CDS-3UTR CAA 90 bp ACAAGGTGTGAGTCACACACTAGGGAGACAGACATCTGTTCAACACAGAATTCCTCGCCGCCGATGATCTaGGAGACGCCCCTCTCCACC +
Preference number: 5 (lower is better)
Translates to: TRCESHTRETDICSTQNSSPPMI*ETPLST
Trigger: GGTGGAGAGGGGCGTCTCCAAGATCATCGGCGGCGA...GGAATTCTGTGTTGAACAGATGTCTGTCTCCCTAGTGTGTGACTCACACCTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CAA 90 bp TCAGAAGAACGTGTACAGACACCCTGCAGAGACGAGGGTCATGACTGGGCCCTCTTGGTGTACAGAAAATaGTTGCCCTTAGGGTCGCCG +
Preference number: 5 (lower is better)
Translates to: SEERVQTPCRDEGHDWALLVYRK*LPLGSP
Trigger: CGGCGACCCTAAGGGCAACAATTTTCTGTACACCAA...GAGGGCCCAGTCATGACCCTCGTCTCTGCAGGGTGTCTGTACACGTTCTTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR CAA 90 bp CAGGGGCTCTGTGTGCTTTGGAGGCTACTGCCTCTGGAATGTTTCGCATTCTCACAGTTTCACAACTCCTaGTCCGCTGTAGTCCCGCAG +
Preference number: 5 (lower is better)
Translates to: QGLCVLWRLLPLECFAFSQFHNS*SAVVPQ
Trigger: CTGCGGGACTACAGCGGACAAGGAGTTGTGAAACTG...TGAGAATGCGAAACATTCCAGAGGCAGTAGCCTCCAAAGCACACAGAGCCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CAA 90 bp TCATGTGCAAACTGTTACTGTCTAAAGCTTTCAGAAGAACGTGTACAGACACCCCGTCCACACCCCCAATaGCCACCGTGTCCCCGCCGG +
Preference number: 5 (lower is better)
Translates to: SCANCYCLKLSEERVQTPRPHPQ*PPCPRR
Trigger: CCGGCGGGGACACGGTGGCAATTGGGGGTGTGGACG...GGGTGTCTGTACACGTTCTTCTGAAAGCTTTAGACAGTAACAGTTTGCACATGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR CAA 90 bp GTTCAACACAGAATTCCGGCTTTGCTGAACTGCAATGCATATTCCCTCTTCTCATCGGTCACGGGGCCCTaGGCCTCTAGGAGCTTGCCC +
Preference number: 5 (lower is better)
Translates to: VQHRIPALLNCNAYSLFSSVTGP*ASRSLP
Trigger: GGGCAAGCTCCTAGAGGCCAAGGGCCCCGTGACCGA...TGAGAAGAGGGAATATGCATTGCAGTTCAGCAAAGCCGGAATTCTGTGTTGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CAA 90 bp TCAGAAGAACGTGTACAGACACCCTGCAGAGACGAGGGTCATGACTGGGCCCTCTGTGCATCTTGGATCTaGACTCTGGTTTCCGGGTCA +
Preference number: 5 (lower is better)
Translates to: SEERVQTPCRDEGHDWALCASWI*TLVSGS
Trigger: TGACCCGGAAACCAGAGTCAAGATCCAAGATGCACA...GAGGGCCCAGTCATGACCCTCGTCTCTGCAGGGTGTCTGTACACGTTCTTCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS TCA 90 bp CACAACCTTGACCATGACATAACCACAGCTCGAATCCTAGACCTCTaGCCAGCACATCGAGTTCTCTCGCTGCCGAACTCCGCTTCCTTG +
Preference number: 5 (lower is better)
Translates to: HNLDHDITTARILDL*PAHRVLSLPNSASL
Trigger: CAAGGAAGCGGAGTTCGGCAGCGAGAGAACTCGATGTGCTGGTCAGAGGTCTAGGATTCGAGCTGTGGTTATGTCATGGTCAAGGTTGTG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515743.5
CDS CCA 90 bp CCCAAATGCCCGAATCACCCAAGCCCAGATGAGTGGGTGGGACAGTaGACGCTGATGGCTCTTGCTACAAAATGGAGGAAACTAATCAGC +
Preference number: 5 (lower is better)
Translates to: PKCPNHPSPDEWVGQ*TLMALATKWRKLIS
Trigger: GCTGATTAGTTTCCTCCATTTTGTAGCAAGAGCCATCAGCGTCCACTGTCCCACCCACTCATCTGGGCTTGGGTGATTCGGGCATTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515743.5
CDS-3UTR CAA 90 bp AGACACCCTGCAGAGACGAGGGTCATGACTGGGCCCTCCTGCCTCTTGTGGTGGATGACGCACTTTCCATaGGTGTACAGAAAATTGTTG +
Preference number: 5 (lower is better)
Translates to: RHPAETRVMTGPSCLLWWMTHFP*VYRKLL
Trigger: CAACAATTTTCTGTACACCAATGGAAAGTGCGTCAT...CCACCACAAGAGGCAGGAGGGCCCAGTCATGACCCTCGTCTCTGCAGGGTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR CAA 90 bp CTGTCTAAAGCTTTCAGAAGAACGTGTACAGACACCCTGCAGAGACGAGGGTCAGAATACAGGCGGACGTaGCCGTCCACACCCCCAATT +
Preference number: 5 (lower is better)
Translates to: LSKAFRRTCTDTLQRRGSEYRRT*PSTPPI
Trigger: AATTGGGGGTGTGGACGGCAACGTCCGCCTGTATTC...TGACCCTCGTCTCTGCAGGGTGTCTGTACACGTTCTTCTGAAAGCTTTAGACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR CAA 90 bp CTGTCTAAAGCTTTCAGAAGAACGTGTACAGACACCCTGCAGAGACGAGGGTCATTGGCCTCTAGGAGCTaGCCCTCATCCTTCAGCGTG +
Preference number: 5 (lower is better)
Translates to: LSKAFRRTCTDTLQRRGSLASRS*PSSFSV
Trigger: CACGCTGAAGGATGAGGGCAAGCTCCTAGAGGCCAA...TGACCCTCGTCTCTGCAGGGTGTCTGTACACGTTCTTCTGAAAGCTTTAGACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR CAA 90 bp GGGGGCATGGGGGCGCGTCACAGAAATAGAGAAATGACATGTTCCGCTGCAGTTGTGCAAGGGGAGGGATaGTTCTCAGCCAACATTTAC +
Preference number: 5 (lower is better)
Translates to: GGMGARHRNREMTCSAAVVQGEG*FSANIY
Trigger: GTAAATGTTGGCTGAGAACAATCCCTCCCCTTGCAC...AACTGCAGCGGAACATGTCATTTCTCTATTTCTGTGACGCGCCCCCATGCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS GCA 90 bp GGCTTTAGCACTCTGTCCACATCACCAGGCTGGCTCTTTTCCAGATaGAGAACTCAACTATCTGCACGAGAACCCGATGCTGAGGTCACT +
Preference number: 5 (lower is better)
Translates to: GFSTLSTSPGWLFSR*RTQLSAREPDAEVT
Trigger: AGTGACCTCAGCATCGGGTTCTCGTGCAGATAGTTGAGTTCTGCATCTGGAAAAGAGCCAGCCTGGTGATGTGGACAGAGTGCTAAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515743.5
CDS CCA 90 bp GTTGACAAAGCGGCTGTGGTCGCCAATTGTGAACTTGAACTTGAATaGGGGTCCCTCAAAGAATGCCGCGCAGTTATCATCGCTTCCCGT +
Preference number: 5 (lower is better)
Translates to: VDKAAVVANCELELE*GSLKECRAVIIASR
Trigger: ACGGGAAGCGATGATAACTGCGCGGCATTCTTTGAGGGACCCCCATTCAAGTTCAAGTTCACAATTGGCGACCACAGCCGCTTTGTCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382452.6
ENST00000499869.7
ENST00000508079.1
CDS CCA 90 bp ACCTGTCACAAGTGCCCATTTCAGTGGCTCCCTGAGGTCAAAACATaGACATTCCTACTCCAGTTCCAGGTCCCAGAAGCGAGGACATTC +
Preference number: 5 (lower is better)
Translates to: TCHKCPFQWLPEVKT*TFLLQFQVPEARTF
Trigger: GAATGTCCTCGCTTCTGGGACCTGGAACTGGAGTAGGAATGTCCATGTTTTGACCTCAGGGAGCCACTGAAATGGGCACTTGTGACAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515743.5
CDS-3UTR CAA 90 bp TCAGAAGAACGTGTACAGACACCCTGCAGAGACGAGGGTCATGACTGGGCCCTCTTGATGTCCACGCTGTaGATGACTTTGTTGTGTCCT +
Preference number: 5 (lower is better)
Translates to: SEERVQTPCRDEGHDWALLMSTL*MTLLCP
Trigger: AGGACACAACAAAGTCATCAACAGCGTGGACATCAA...GAGGGCCCAGTCATGACCCTCGTCTCTGCAGGGTGTCTGTACACGTTCTTCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CAA 90 bp AACGGTGACCAGGACACCTCGGTCTGGCTAACAAGGGTTCTAAAAACTTGGACATATGGCCGGCTCTGCTaGATGTCCACGCTGTTGATG +
Preference number: 5 (lower is better)
Translates to: NGDQDTSVWLTRVLKTWTYGRLC*MSTLLM
Trigger: CATCAACAGCGTGGACATCAAGCAGAGCCGGCCATA...TGTCCAAGTTTTTAGAACCCTTGTTAGCCAGACCGAGGTGTCCTGGTCACCGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CAA 90 bp AACGGTGACCAGGACACCTCGGTCTGGCTAACAAGGGTTCTAAAAACTTGGACAGGCTCGCCCCCAGCTTaGACCATATATAGTCAAGCG +
Preference number: 5 (lower is better)
Translates to: NGDQDTSVWLTRVLKTWTGSPPA*TIYSQA
Trigger: CGCTTGACTATATATGGTCAAAGCTGGGGGCGAGCC...TGTCCAAGTTTTTAGAACCCTTGTTAGCCAGACCGAGGTGTCCTGGTCACCGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000382451.6
ENST00000382452.6
CDS-3UTR CAA 90 bp CTGTCTAAAGCTTTCAGAAGAACGTGTACAGACACCCTGCAGAGACGAGGGTCAGAGAATCGCACACAGTaGACAAAGCGGCTGTGGTCG +
Preference number: 5 (lower is better)
Translates to: LSKAFRRTCTDTLQRRGSENRTQ*TKRLWS
Trigger: CGACCACAGCCGCTTTGTCAACTGTGTGCGATTCTC...TGACCCTCGTCTCTGCAGGGTGTCTGTACACGTTCTTCTGAAAGCTTTAGACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR CAA 90 bp TCTCAGGCTAATCTCTTAAAGCGCTCAAAGTGTTTTCACAAGTGCAAGGGGAGGGGGGCTCTGTGTGCTTaGGAGGCTACTGCCTCTGGA +
Preference number: 5 (lower is better)
Translates to: SQANLLKRSKCFHKCKGRGALCA*EATASG
Trigger: TCCAGAGGCAGTAGCCTCCAAAGCACACAGAGCCCC...CCTCCCCTTGCACTTGTGAAAACACTTTGAGCGCTTTAAGAGATTAGCCTGAGA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CAA 90 bp CAGGCTAATCTCTTAAAGCGCTCAAAGTGTTTTCACAAGTGCAAGGGGAGGGATGGGGCTCTGTGTGCTTaGGAGGCTACTGCCTCTGGA +
Preference number: 5 (lower is better)
Translates to: QANLLKRSKCFHKCKGRDGALCA*EATASG
Trigger: TCCAGAGGCAGTAGCCTCCAAAGCACACAGAGCCCC...ATCCCTCCCCTTGCACTTGTGAAAACACTTTGAGCGCTTTAAGAGATTAGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS TCA 90 bp CACCTCGAGCCAAGGAGTCCAAATGCAGACACTGATGTCTGCTCCTaGAATAGCCCCTTCAAAGAGAGAAGCCGCGAAAAGCCCATTAAC +
Preference number: 5 (lower is better)
Translates to: HLEPRSPNADTDVCS*NSPFKERSREKPIN
Trigger: GTTAATGGGCTTTTCGCGGCTTCTCTCTTTGAAGGGGCTATTTCAGGAGCAGACATCAGTGTCTGCATTTGGACTCCTTGGCTCGAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515743.5
CDS GCA 90 bp TCTTTGATCTTCCCAGCGAAAGGCTGGTACTCATACTTCAACAGGTaGTCCTTCTGCGTGGTATCCCAGATCCTCAGCTTCCCAGACACA +
Preference number: 5 (lower is better)
Translates to: SLIFPAKGWYSYFNR*SFCVVSQILSFPDT
Trigger: TGTGTCTGGGAAGCTGAGGATCTGGGATACCACGCAGAAGGAGCACCTGTTGAAGTATGAGTACCAGCCTTTCGCTGGGAAGATCAAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264785.11
ENST00000382452.6
ENST00000499869.7
ENST00000505851.5
ENST00000508079.1
ENST00000514319.5
ENST00000515018.1
CDS-3UTR CAA 90 bp GGGGGCATGGGGGCGCGTCACAGAAATAGAGAAATGACATGTTCCGCTGCAGTTACGCTGTTGATGACTTaGTTGTGTCCTGTAATCTCG +
Preference number: 5 (lower is better)
Translates to: GGMGARHRNREMTCSAAVTLLMT*LCPVIS
Trigger: CGAGATTACAGGACACAACAAAGTCATCAACAGCGT...AACTGCAGCGGAACATGTCATTTCTCTATTTCTGTGACGCGCCCCCATGCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CAA 90 bp ACACGCAAAAACACTCCCAATCACGGTGCTTTATACTTACTTTTAATTTCTGCAGGCATCCTCGCCCACTaGTTACCGCGCCGCGCTCGC +
Preference number: 5 (lower is better)
Translates to: TRKNTPNHGALYLLLISAGILAH*LPRRAR
Trigger: GCGAGCGCGGCGCGGTAACAAGTGGGCGAGGATGCC...TGCAGAAATTAAAAGTAAGTATAAAGCACCGTGATTGGGAGTGTTTTTGCGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CAA 90 bp TATTCCCTCTTCTCACTAGTACAGAAATGTTCTGCAGGCAGGAACATGAGCCCCCTGGCGAACACCTTCTaGATCTCGTACGGCATCCTC +
Preference number: 5 (lower is better)
Translates to: YSLFSLVQKCSAGRNMSPLANTF*ISYGIL
Trigger: GAGGATGCCGTACGAGATCAAGAAGGTGTTCGCCAG...GGGGCTCATGTTCCTGCCTGCAGAACATTTCTGTACTAGTGAGAAGAGGGAATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CAA 90 bp TGTCTAAAGCTTTCAGAAGAACGTGTACAGACACCCTGCAGAGACGAGGGTCATCAGTTTCACAACTCCTaGTCCGCTGTAGTCCCGCAG +
Preference number: 5 (lower is better)
Translates to: CLKLSEERVQTPCRDEGHQFHNS*SAVVPQ
Trigger: CTGCGGGACTACAGCGGACAAGGAGTTGTGAAACTG...ATGACCCTCGTCTCTGCAGGGTGTCTGTACACGTTCTTCTGAAAGCTTTAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR CAA 90 bp TGTCTAAAGCTTTCAGAAGAACGTGTACAGACACCCTGCAGAGACGAGGGTCATCGACGGCTACGCACTTaGGCTGAACGTCCAGTTTCA +
Preference number: 5 (lower is better)
Translates to: CLKLSEERVQTPCRDEGHRRLRT*AERPVS
Trigger: TGAAACTGGACGTTCAGCCAAAGTGCGTAGCCGTCG...ATGACCCTCGTCTCTGCAGGGTGTCTGTACACGTTCTTCTGAAAGCTTTAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR CAA 90 bp CACACGCAAAAACACTCCCAATCACGGTGCTTTATACTTACTTTTAATTTCTGCTCGGTCACGGGGCCCTaGGCCTCTAGGAGCTTGCCC +
Preference number: 5 (lower is better)
Translates to: HTQKHSQSRCFILTFNFCSVTGP*ASRSLP
Trigger: GGGCAAGCTCCTAGAGGCCAAGGGCCCCGTGACCGA...GCAGAAATTAAAAGTAAGTATAAAGCACCGTGATTGGGAGTGTTTTTGCGTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CAA 90 bp CTAAAGCTTTCAGAAGAACGTGTACAGACACCCTGCAGAGACGAGGGTCATGACGTGATTGTCCACTCCTaGACAGAGGCATCATGGGAG +
Preference number: 5 (lower is better)
Translates to: LKLSEERVQTPCRDEGHDVIVHS*TEASWE
Trigger: CTCCCATGATGCCTCTGTCAAGGAGTGGACAATCAC...GTCATGACCCTCGTCTCTGCAGGGTGTCTGTACACGTTCTTCTGAAAGCTTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR CAA 90 bp CAGGGGCTCTGTGTGCTTTGGAGGCTACTGCCTCTGGAATGTTTCGCATTCTCATCGCATTCTCAAGGTTaGGTTGGGCTGTGGGTTTTA +
Preference number: 5 (lower is better)
Translates to: QGLCVLWRLLPLECFAFSSHSQG*VGLWVL
Trigger: TAAAACCCACAGCCCAACCAAACCTTGAGAATGCGA...TGAGAATGCGAAACATTCCAGAGGCAGTAGCCTCCAAAGCACACAGAGCCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS TCA 90 bp CGACCACGGCGATCCTCTTACTGTCTTCAGTCCAAGCAATGTCTTTaGTCTTCCCAGCGAAAGGCTGGTACTCATACTTCAACAGGTGCT +
Preference number: 5 (lower is better)
Translates to: RPRRSSYCLQSKQCL*SSQRKAGTHTSTGA
Trigger: AGCACCTGTTGAAGTATGAGTACCAGCCTTTCGCTGGGAAGATCAAAGACATTGCTTGGACTGAAGACAGTAAGAGGATCGCCGTGGTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264785.11
ENST00000382452.6
ENST00000499869.7
ENST00000505851.5
ENST00000508079.1
ENST00000514319.5
ENST00000515018.1
CDS TCA 90 bp CTGTTCAATTCCAACCTGTCACAAGTGCCCATTTCAGTGGCTCCCTaGGGTCAAAACATGGACATTCCTACTCCAGTTCCAGGTCCCAGA +
Preference number: 5 (lower is better)
Translates to: LFNSNLSQVPISVAP*GQNMDIPTPVPGPR
Trigger: TCTGGGACCTGGAACTGGAGTAGGAATGTCCATGTTTTGACCTCAGGGAGCCACTGAAATGGGCACTTGTGACAGGTTGGAATTGAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515743.5
CDS CCA 90 bp CTGTCTTCAGTCCAAGCAATGTCTTTGATCTTCCCAGCGAAAGGCTaGTACTCATACTTCAACAGGTGCTCCTTCTGCGTGGTATCCCAG +
Preference number: 5 (lower is better)
Translates to: LSSVQAMSLIFPAKG*YSYFNRCSFCVVSQ
Trigger: CTGGGATACCACGCAGAAGGAGCACCTGTTGAAGTATGAGTACCAGCCTTTCGCTGGGAAGATCAAAGACATTGCTTGGACTGAAGACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264785.11
ENST00000382452.6
ENST00000499869.7
ENST00000505851.5
ENST00000508079.1
ENST00000514319.5
ENST00000515018.1
CDS CCA 90 bp ATACACCATCATGTCCATGCCACCGGAGGCAAAGTGTTCATTGTCTaGGGACCAGGCCAGGCAGACGATTTTTGCATGGTGTCCATAAAA +
Preference number: 5 (lower is better)
Translates to: IHHHVHATGGKVFIV*GPGQADDFCMVSIK
Trigger: TTTTATGGACACCATGCAAAAATCGTCTGCCTGGCCTGGTCCCCAGACAATGAACACTTTGCCTCCGGTGGCATGGACATGATGGTGTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
ENST00000502962.5
ENST00000515743.5
CDS-3UTR CAA 90 bp CAGGCTAATCTCTTAAAGCGCTCAAAGTGTTTTCACAAGTGCAAGGGGAGGGATGTGTACAGAAAATTGTaGCCCTTAGGGTCGCCGCCG +
Preference number: 5 (lower is better)
Translates to: QANLLKRSKCFHKCKGRDVYRKL*PLGSPP
Trigger: CGGCGGCGACCCTAAGGGCAACAATTTTCTGTACAC...ATCCCTCCCCTTGCACTTGTGAAAACACTTTGAGCGCTTTAAGAGATTAGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CAA 90 bp GCAAACTGTTACTGTCTAAAGCTTTCAGAAGAACGTGTACAGACACCCTGCAGAGAATACAGGCGGACGTaGCCGTCCACACCCCCAATT +
Preference number: 5 (lower is better)
Translates to: ANCYCLKLSEERVQTPCREYRRT*PSTPPI
Trigger: AATTGGGGGTGTGGACGGCAACGTCCGCCTGTATTC...TCTGCAGGGTGTCTGTACACGTTCTTCTGAAAGCTTTAGACAGTAACAGTTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR CAA 90 bp GTTTTCACAAGTGCAAGGGGAGGGATTGTTCTCAGCCAACATTTACCAGTGATTTTGGCCTCTAGGAGCTaGCCCTCATCCTTCAGCGTG +
Preference number: 5 (lower is better)
Translates to: VFTSARGGIVLSQHLPVILASRS*PSSFSV
Trigger: CACGCTGAAGGATGAGGGCAAGCTCCTAGAGGCCAA...AATCACTGGTAAATGTTGGCTGAGAACAATCCCTCCCCTTGCACTTGTGAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CAA 90 bp TGTCTAAAGCTTTCAGAAGAACGTGTACAGACACCCTGCAGAGACGAGGGTCATCAGCCGGTGTGCATCTaGGATCTTGACTCTGGTTTC +
Preference number: 5 (lower is better)
Translates to: CLKLSEERVQTPCRDEGHQPVCI*DLDSGF
Trigger: GAAACCAGAGTCAAGATCCAAGATGCACACCGGCTG...ATGACCCTCGTCTCTGCAGGGTGTCTGTACACGTTCTTCTGAAAGCTTTAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS CCA 90 bp ATCAGCCACTGTTCAATTCCAACCTGTCACAAGTGCCCATTTCAGTaGCTCCCTGAGGTCAAAACATGGACATTCCTACTCCAGTTCCAG +
Preference number: 5 (lower is better)
Translates to: ISHCSIPTCHKCPFQ*LPEVKTWTFLLQFQ
Trigger: CTGGAACTGGAGTAGGAATGTCCATGTTTTGACCTCAGGGAGCCACTGAAATGGGCACTTGTGACAGGTTGGAATTGAACAGTGGCTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515743.5
CDS CCA 90 bp GATGAGTGGGTGGGACAGTGGACGCTGATGGCTCTTGCTACAAAATaGAGGAAACTAATCAGCCACTGTTCAATTCCAACCTGTCACAAG +
Preference number: 5 (lower is better)
Translates to: DEWVGQWTLMALATK*RKLISHCSIPTCHK
Trigger: CTTGTGACAGGTTGGAATTGAACAGTGGCTGATTAGTTTCCTCCATTTTGTAGCAAGAGCCATCAGCGTCCACTGTCCCACCCACTCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515743.5
CDS-3UTR CAA 90 bp GTTTTCACAAGTGCAAGGGGAGGGATTGTTCTCAGCCAACATTTACCAGTGATTGGCTCGCCCCCAGCTTaGACCATATATAGTCAAGCG +
Preference number: 5 (lower is better)
Translates to: VFTSARGGIVLSQHLPVIGSPPA*TIYSQA
Trigger: CGCTTGACTATATATGGTCAAAGCTGGGGGCGAGCC...AATCACTGGTAAATGTTGGCTGAGAACAATCCCTCCCCTTGCACTTGTGAAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000382451.6
ENST00000382452.6
CDS-3UTR CAA 90 bp CAGGCTAATCTCTTAAAGCGCTCAAAGTGTTTTCACAAGTGCAAGGGGAGGGATTCAGCAAGGGCTGGGTaGTCGATGTTCCTTAGGATG +
Preference number: 5 (lower is better)
Translates to: QANLLKRSKCFHKCKGRDSARAG*SMFLRM
Trigger: CATCCTAAGGAACATCGACAACCCAGCCCTTGCTGA...ATCCCTCCCCTTGCACTTGTGAAAACACTTTGAGCGCTTTAAGAGATTAGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CAA 90 bp GCAAACTGTTACTGTCTAAAGCTTTCAGAAGAACGTGTACAGACACCCTGCAGAGAGAATCGCACACAGTaGACAAAGCGGCTGTGGTCG +
Preference number: 5 (lower is better)
Translates to: ANCYCLKLSEERVQTPCRENRTQ*TKRLWS
Trigger: CGACCACAGCCGCTTTGTCAACTGTGTGCGATTCTC...TCTGCAGGGTGTCTGTACACGTTCTTCTGAAAGCTTTAGACAGTAACAGTTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR CAA 90 bp AACGGTGACCAGGACACCTCGGTCTGGCTAACAAGGGTTCTAAAAACTTGGACACTGACGTCCCAAATCTaGGAAGTTTTGTCCCCAGAA +
Preference number: 5 (lower is better)
Translates to: NGDQDTSVWLTRVLKTWTLTSQI*EVLSPE
Trigger: TTCTGGGGACAAAACTTCCAAGATTTGGGACGTCAG...TGTCCAAGTTTTTAGAACCCTTGTTAGCCAGACCGAGGTGTCCTGGTCACCGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CAA 90 bp GGGCTGTGGGTTTTAGTTATGCTCCACACATTGTTTAGGTGCTCGCTTTATTTTATGACGTGCAGGGGCTaGCTGGGGTTGTTTCTGTCC +
Preference number: 5 (lower is better)
Translates to: GLWVLVMLHTLFRCSLYFMTCRG*LGLFLS
Trigger: GGACAGAAACAACCCCAGCAAGCCCCTGCACGTCAT...AAAATAAAGCGAGCACCTAAACAATGTGTGGAGCATAACTAAAACCCACAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CAA 90 bp GTTTTCACAAGTGCAAGGGGAGGGATTGTTCTCAGCCAACATTTACCAGTGATTCGACGGCTACGCACTTaGGCTGAACGTCCAGTTTCA +
Preference number: 5 (lower is better)
Translates to: VFTSARGGIVLSQHLPVIRRLRT*AERPVS
Trigger: TGAAACTGGACGTTCAGCCAAAGTGCGTAGCCGTCG...AATCACTGGTAAATGTTGGCTGAGAACAATCCCTCCCCTTGCACTTGTGAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CAA 90 bp ATGCTCCACACATTGTTTAGGTGCTCGCTTTATTTTTCATGTGCAAACTGTTACAACACTGTGACCACCTaGCTGGCGTCGCACACCGCG +
Preference number: 5 (lower is better)
Translates to: MLHTLFRCSLYFSCANCYNTVTT*LASHTA
Trigger: CGCGGTGTGCGACGCCAGCAAGGTGGTCACAGTGTT...GTAACAGTTTGCACATGAAAAATAAAGCGAGCACCTAAACAATGTGTGGAGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CAA 90 bp TCATGTGCAAACTGTTACTGTCTAAAGCTTTCAGAAGAACGTGTACAGACACCCGAGGCAAAGTGTTCATaGTCTGGGGACCAGGCCAGG +
Preference number: 5 (lower is better)
Translates to: SCANCYCLKLSEERVQTPEAKCS*SGDQAR
Trigger: CCTGGCCTGGTCCCCAGACAATGAACACTTTGCCTC...GGGTGTCTGTACACGTTCTTCTGAAAGCTTTAGACAGTAACAGTTTGCACATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR CAA 90 bp ATGTGCAAACTGTTACTGTCTAAAGCTTTCAGAAGAACGTGTACAGACACCCTGGAGGCAAAGTGTTCATaGTCTGGGGACCAGGCCAGG +
Preference number: 5 (lower is better)
Translates to: MCKLLLSKAFRRTCTDTLEAKCS*SGDQAR
Trigger: CCTGGCCTGGTCCCCAGACAATGAACACTTTGCCTC...CAGGGTGTCTGTACACGTTCTTCTGAAAGCTTTAGACAGTAACAGTTTGCACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR CAA 90 bp TCTCAGGCTAATCTCTTAAAGCGCTCAAAGTGTTTTCACAAGTGCAAGGGGAGGGTGATTGTCCACTCCTaGACAGAGGCATCATGGGAG +
Preference number: 5 (lower is better)
Translates to: SQANLLKRSKCFHKCKGRVIVHS*TEASWE
Trigger: CTCCCATGATGCCTCTGTCAAGGAGTGGACAATCAC...CCTCCCCTTGCACTTGTGAAAACACTTTGAGCGCTTTAAGAGATTAGCCTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CAA 90 bp TGTCTAAAGCTTTCAGAAGAACGTGTACAGACACCCTGCAGAGACGAGGGTCATAAGGGTTCTAAAAACTaGGACACGGTGCCGTCAACG +
Preference number: 5 (lower is better)
Translates to: CLKLSEERVQTPCRDEGHKGSKN*DTVPST
Trigger: CGTTGACGGCACCGTGTCCAAGTTTTTAGAACCCTT...ATGACCCTCGTCTCTGCAGGGTGTCTGTACACGTTCTTCTGAAAGCTTTAGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CAA 90 bp TATTCCCTCTTCTCACTAGTACAGAAATGTTCTGCAGGCAGGAACATGAGCCCCGTGCAAGGGGAGGGATaGTTCTCAGCCAACATTTAC +
Preference number: 5 (lower is better)
Translates to: YSLFSLVQKCSAGRNMSPVQGEG*FSANIY
Trigger: GTAAATGTTGGCTGAGAACAATCCCTCCCCTTGCAC...GGGGCTCATGTTCCTGCCTGCAGAACATTTCTGTACTAGTGAGAAGAGGGAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CAA 90 bp TCATGTGCAAACTGTTACTGTCTAAAGCTTTCAGAAGAACGTGTACAGACACCCCTGGCGAACACCTTCTaGATCTCGTACGGCATCCTC +
Preference number: 5 (lower is better)
Translates to: SCANCYCLKLSEERVQTPLANTF*ISYGIL
Trigger: GAGGATGCCGTACGAGATCAAGAAGGTGTTCGCCAG...GGGTGTCTGTACACGTTCTTCTGAAAGCTTTAGACAGTAACAGTTTGCACATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR CAA 90 bp TATTTTTCATGTGCAAACTGTTACTGTCTAAAGCTTTCAGAAGAACGTGTACAGTCGCCGCCGATGATCTaGGAGACGCCCCTCTCCACC +
Preference number: 5 (lower is better)
Translates to: YFSCANCYCLKLSEERVQSPPMI*ETPLST
Trigger: GGTGGAGAGGGGCGTCTCCAAGATCATCGGCGGCGA...CTGTACACGTTCTTCTGAAAGCTTTAGACAGTAACAGTTTGCACATGAAAAATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR CAA 90 bp ACAAGGTGTGAGTCACACACTAGGGAGACAGACATCTGTTCAACACAGAATTCCTTGGTGTACAGAAAATaGTTGCCCTTAGGGTCGCCG +
Preference number: 5 (lower is better)
Translates to: TRCESHTRETDICSTQNSLVYRK*LPLGSP
Trigger: CGGCGACCCTAAGGGCAACAATTTTCTGTACACCAA...GGAATTCTGTGTTGAACAGATGTCTGTCTCCCTAGTGTGTGACTCACACCTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CAA 90 bp GTTCAACACAGAATTCCGGCTTTGCTGAACTGCAATGCATATTCCCTCTTCTCATCAGCAAGGGCTGGGTaGTCGATGTTCCTTAGGATG +
Preference number: 5 (lower is better)
Translates to: VQHRIPALLNCNAYSLFSSARAG*SMFLRM
Trigger: CATCCTAAGGAACATCGACAACCCAGCCCTTGCTGA...TGAGAAGAGGGAATATGCATTGCAGTTCAGCAAAGCCGGAATTCTGTGTTGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CAA 90 bp TCTCAGGCTAATCTCTTAAAGCGCTCAAAGTGTTTTCACAAGTGCAAGGGGAGGTCGCCAATTGTGAACTaGAACTTGAATGGGGGTCCC +
Preference number: 5 (lower is better)
Translates to: SQANLLKRSKCFHKCKGRSPIVN*NLNGGP
Trigger: GGGACCCCCATTCAAGTTCAAGTTCACAATTGGCGA...CCTCCCCTTGCACTTGTGAAAACACTTTGAGCGCTTTAAGAGATTAGCCTGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CAA 90 bp TGTCTAAAGCTTTCAGAAGAACGTGTACAGACACCCTGCAGAGACGAGGGTCATCTGACGTCCCAAATCTaGGAAGTTTTGTCCCCAGAA +
Preference number: 5 (lower is better)
Translates to: CLKLSEERVQTPCRDEGHLTSQI*EVLSPE
Trigger: TTCTGGGGACAAAACTTCCAAGATTTGGGACGTCAG...ATGACCCTCGTCTCTGCAGGGTGTCTGTACACGTTCTTCTGAAAGCTTTAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR CAA 90 bp ACACGCAAAAACACTCCCAATCACGGTGCTTTATACTTACTTTTAATTTCTGCAAACACTGTGACCACCTaGCTGGCGTCGCACACCGCG +
Preference number: 5 (lower is better)
Translates to: TRKNTPNHGALYLLLISANTVTT*LASHTA
Trigger: CGCGGTGTGCGACGCCAGCAAGGTGGTCACAGTGTT...TGCAGAAATTAAAAGTAAGTATAAAGCACCGTGATTGGGAGTGTTTTTGCGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CAA 90 bp TGTTTCGCATTCTCAAGGTTTGGTTGGGCTGTGGGTTTTAGTTATGCTCCACACTGTGCATCTTGGATCTaGACTCTGGTTTCCGGGTCA +
Preference number: 5 (lower is better)
Translates to: CFAFSRFGWAVGFSYAPHCASWI*TLVSGS
Trigger: TGACCCGGAAACCAGAGTCAAGATCCAAGATGCACA...GTGTGGAGCATAACTAAAACCCACAGCCCAACCAAACCTTGAGAATGCGAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CAA 90 bp TGTCTAAAGCTTTCAGAAGAACGTGTACAGACACCCTGCAGAGACGAGGGTCATTCGCATTCTCAAGGTTaGGTTGGGCTGTGGGTTTTA +
Preference number: 5 (lower is better)
Translates to: CLKLSEERVQTPCRDEGHSHSQG*VGLWVL
Trigger: TAAAACCCACAGCCCAACCAAACCTTGAGAATGCGA...ATGACCCTCGTCTCTGCAGGGTGTCTGTACACGTTCTTCTGAAAGCTTTAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CAA 90 bp TCTCAGGCTAATCTCTTAAAGCGCTCAAAGTGTTTTCACAAGTGCAAGGGGAGGAAGGGTTCTAAAAACTaGGACACGGTGCCGTCAACG +
Preference number: 5 (lower is better)
Translates to: SQANLLKRSKCFHKCKGRKGSKN*DTVPST
Trigger: CGTTGACGGCACCGTGTCCAAGTTTTTAGAACCCTT...CCTCCCCTTGCACTTGTGAAAACACTTTGAGCGCTTTAAGAGATTAGCCTGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CAA 90 bp CAGGCTAATCTCTTAAAGCGCTCAAAGTGTTTTCACAAGTGCAAGGGGAGGGATAAGGGTTCTAAAAACTaGGACACGGTGCCGTCAACG +
Preference number: 5 (lower is better)
Translates to: QANLLKRSKCFHKCKGRDKGSKN*DTVPST
Trigger: CGTTGACGGCACCGTGTCCAAGTTTTTAGAACCCTT...ATCCCTCCCCTTGCACTTGTGAAAACACTTTGAGCGCTTTAAGAGATTAGCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS GCA 90 bp TGGAGGAAACTAATCAGCCACTGTTCAATTCCAACCTGTCACAAGTaGCCATTTCAGTGGCTCCCTGAGGTCAAAACATGGACATTCCTA +
Preference number: 5 (lower is better)
Translates to: WRKLISHCSIPTCHK*PFQWLPEVKTWTFL
Trigger: TAGGAATGTCCATGTTTTGACCTCAGGGAGCCACTGAAATGGGCACTTGTGACAGGTTGGAATTGAACAGTGGCTGATTAGTTTCCTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515743.5
CDS-3UTR CAA 90 bp CACACGCAAAAACACTCCCAATCACGGTGCTTTATACTTACTTTTAATTTCTGCGAGGCAAAGTGTTCATaGTCTGGGGACCAGGCCAGG +
Preference number: 5 (lower is better)
Translates to: HTQKHSQSRCFILTFNFCEAKCS*SGDQAR
Trigger: CCTGGCCTGGTCCCCAGACAATGAACACTTTGCCTC...GCAGAAATTAAAAGTAAGTATAAAGCACCGTGATTGGGAGTGTTTTTGCGTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CAA 90 bp CACACGCAAAAACACTCCCAATCACGGTGCTTTATACTTACTTTTAATTTCTGCTATGGCCGGCTCTGCTaGATGTCCACGCTGTTGATG +
Preference number: 5 (lower is better)
Translates to: HTQKHSQSRCFILTFNFCYGRLC*MSTLLM
Trigger: CATCAACAGCGTGGACATCAAGCAGAGCCGGCCATA...GCAGAAATTAAAAGTAAGTATAAAGCACCGTGATTGGGAGTGTTTTTGCGTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CAA 90 bp GGGCTGTGGGTTTTAGTTATGCTCCACACATTGTTTAGGTGCTCGCTTTATTTTTTGGTGTACAGAAAATaGTTGCCCTTAGGGTCGCCG +
Preference number: 5 (lower is better)
Translates to: GLWVLVMLHTLFRCSLYFLVYRK*LPLGSP
Trigger: CGGCGACCCTAAGGGCAACAATTTTCTGTACACCAA...AAAATAAAGCGAGCACCTAAACAATGTGTGGAGCATAACTAAAACCCACAGCCC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CAA 90 bp TACAGTGACTTCATCTTTGTCCTTAAATTAACCTTTGCTCTTGAGAGCAGAAGAGAATACAGGCGGACGTaGCCGTCCACACCCCCAATT +
Preference number: 5 (lower is better)
Translates to: YSDFIFVLKLTFALESRREYRRT*PSTPPI
Trigger: AATTGGGGGTGTGGACGGCAACGTCCGCCTGTATTC...TCTTCTGCTCTCAAGAGCAAAGGTTAATTTAAGGACAAAGATGAAGTCACTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CAA 90 bp ATGTGCAAACTGTTACTGTCTAAAGCTTTCAGAAGAACGTGTACAGACACCCTGTGTGCATCTTGGATCTaGACTCTGGTTTCCGGGTCA +
Preference number: 5 (lower is better)
Translates to: MCKLLLSKAFRRTCTDTLCASWI*TLVSGS
Trigger: TGACCCGGAAACCAGAGTCAAGATCCAAGATGCACA...CAGGGTGTCTGTACACGTTCTTCTGAAAGCTTTAGACAGTAACAGTTTGCACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR CAA 90 bp TGTTTCGCATTCTCAAGGTTTGGTTGGGCTGTGGGTTTTAGTTATGCTCCACACCACAGAATTCCGGCTTaGCTGAACTGCAATGCATAT +
Preference number: 5 (lower is better)
Translates to: CFAFSRFGWAVGFSYAPHHRIPA*LNCNAY
Trigger: ATATGCATTGCAGTTCAGCAAAGCCGGAATTCTGTG...GTGTGGAGCATAACTAAAACCCACAGCCCAACCAAACCTTGAGAATGCGAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CAA 90 bp GTTCAACACAGAATTCCGGCTTTGCTGAACTGCAATGCATATTCCCTCTTCTCAACGCTGTTGATGACTTaGTTGTGTCCTGTAATCTCG +
Preference number: 5 (lower is better)
Translates to: VQHRIPALLNCNAYSLFSTLLMT*LCPVIS
Trigger: CGAGATTACAGGACACAACAAAGTCATCAACAGCGT...TGAGAAGAGGGAATATGCATTGCAGTTCAGCAAAGCCGGAATTCTGTGTTGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CAA 90 bp GCAAACTGTTACTGTCTAAAGCTTTCAGAAGAACGTGTACAGACACCCTGCAGATTGATGTCCACGCTGTaGATGACTTTGTTGTGTCCT +
Preference number: 5 (lower is better)
Translates to: ANCYCLKLSEERVQTPCRLMSTL*MTLLCP
Trigger: AGGACACAACAAAGTCATCAACAGCGTGGACATCAA...TCTGCAGGGTGTCTGTACACGTTCTTCTGAAAGCTTTAGACAGTAACAGTTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CAA 90 bp GCAAACTGTTACTGTCTAAAGCTTTCAGAAGAACGTGTACAGACACCCTGCAGAATTGTGAACTTGAACTaGAATGGGGGTCCCTCAAAG +
Preference number: 5 (lower is better)
Translates to: ANCYCLKLSEERVQTPCRIVNLN*NGGPSK
Trigger: CTTTGAGGGACCCCCATTCAAGTTCAAGTTCACAAT...TCTGCAGGGTGTCTGTACACGTTCTTCTGAAAGCTTTAGACAGTAACAGTTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CAA 90 bp TTATGCTCCACACATTGTTTAGGTGCTCGCTTTATTTTTCATGTGCAAACTGTTCTGGCGAACACCTTCTaGATCTCGTACGGCATCCTC +
Preference number: 5 (lower is better)
Translates to: LCSTHCLGARFIFHVQTVLANTF*ISYGIL
Trigger: GAGGATGCCGTACGAGATCAAGAAGGTGTTCGCCAG...AACAGTTTGCACATGAAAAATAAAGCGAGCACCTAAACAATGTGTGGAGCATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CAA 90 bp TGTCTAAAGCTTTCAGAAGAACGTGTACAGACACCCTGCAGAGACGAGGGTCATATGACGCACTTTCCATaGGTGTACAGAAAATTGTTG +
Preference number: 5 (lower is better)
Translates to: CLKLSEERVQTPCRDEGHMTHFP*VYRKLL
Trigger: CAACAATTTTCTGTACACCAATGGAAAGTGCGTCAT...ATGACCCTCGTCTCTGCAGGGTGTCTGTACACGTTCTTCTGAAAGCTTTAGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR CAA 90 bp TACAGTGACTTCATCTTTGTCCTTAAATTAACCTTTGCTCTTGAGAGCAGAAGACAGTTTCACAACTCCTaGTCCGCTGTAGTCCCGCAG +
Preference number: 5 (lower is better)
Translates to: YSDFIFVLKLTFALESRRQFHNS*SAVVPQ
Trigger: CTGCGGGACTACAGCGGACAAGGAGTTGTGAAACTG...TCTTCTGCTCTCAAGAGCAAAGGTTAATTTAAGGACAAAGATGAAGTCACTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CAA 90 bp TATTTTTCATGTGCAAACTGTTACTGTCTAAAGCTTTCAGAAGAACGTGTACAGTTGGCCTCTAGGAGCTaGCCCTCATCCTTCAGCGTG +
Preference number: 5 (lower is better)
Translates to: YFSCANCYCLKLSEERVQLASRS*PSSFSV
Trigger: CACGCTGAAGGATGAGGGCAAGCTCCTAGAGGCCAA...CTGTACACGTTCTTCTGAAAGCTTTAGACAGTAACAGTTTGCACATGAAAAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
CDS-3UTR CAA 90 bp CACACGCAAAAACACTCCCAATCACGGTGCTTTATACTTACTTTTAATTTCTGCCAGCCGGTGTGCATCTaGGATCTTGACTCTGGTTTC +
Preference number: 5 (lower is better)
Translates to: HTQKHSQSRCFILTFNFCQPVCI*DLDSGF
Trigger: GAAACCAGAGTCAAGATCCAAGATGCACACCGGCTG...GCAGAAATTAAAAGTAAGTATAAAGCACCGTGATTGGGAGTGTTTTTGCGTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CAA 90 bp ATGCTCCACACATTGTTTAGGTGCTCGCTTTATTTTTCATGTGCAAACTGTTACGTGATTGTCCACTCCTaGACAGAGGCATCATGGGAG +
Preference number: 5 (lower is better)
Translates to: MLHTLFRCSLYFSCANCYVIVHS*TEASWE
Trigger: CTCCCATGATGCCTCTGTCAAGGAGTGGACAATCAC...GTAACAGTTTGCACATGAAAAATAAAGCGAGCACCTAAACAATGTGTGGAGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CAA 90 bp ATGCTCCACACATTGTTTAGGTGCTCGCTTTATTTTTCATGTGCAAACTGTTACTTGGTGTACAGAAAATaGTTGCCCTTAGGGTCGCCG +
Preference number: 5 (lower is better)
Translates to: MLHTLFRCSLYFSCANCYLVYRK*LPLGSP
Trigger: CGGCGACCCTAAGGGCAACAATTTTCTGTACACCAA...GTAACAGTTTGCACATGAAAAATAAAGCGAGCACCTAAACAATGTGTGGAGCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CAA 90 bp ACACGCAAAAACACTCCCAATCACGGTGCTTTATACTTACTTTTAATTTCTGCACAGCCGGTGTGCATCTaGGATCTTGACTCTGGTTTC +
Preference number: 5 (lower is better)
Translates to: TRKNTPNHGALYLLLISAQPVCI*DLDSGF
Trigger: GAAACCAGAGTCAAGATCCAAGATGCACACCGGCTG...TGCAGAAATTAAAAGTAAGTATAAAGCACCGTGATTGGGAGTGTTTTTGCGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CAA 90 bp ATGTGCAAACTGTTACTGTCTAAAGCTTTCAGAAGAACGTGTACAGACACCCTGCACAGAATTCCGGCTTaGCTGAACTGCAATGCATAT +
Preference number: 5 (lower is better)
Translates to: MCKLLLSKAFRRTCTDTLHRIPA*LNCNAY
Trigger: ATATGCATTGCAGTTCAGCAAAGCCGGAATTCTGTG...CAGGGTGTCTGTACACGTTCTTCTGAAAGCTTTAGACAGTAACAGTTTGCACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CAA 90 bp GGGCTGTGGGTTTTAGTTATGCTCCACACATTGTTTAGGTGCTCGCTTTATTTTCACAGAATTCCGGCTTaGCTGAACTGCAATGCATAT +
Preference number: 5 (lower is better)
Translates to: GLWVLVMLHTLFRCSLYFHRIPA*LNCNAY
Trigger: ATATGCATTGCAGTTCAGCAAAGCCGGAATTCTGTG...AAAATAAAGCGAGCACCTAAACAATGTGTGGAGCATAACTAAAACCCACAGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CAA 90 bp GTTCAACACAGAATTCCGGCTTTGCTGAACTGCAATGCATATTCCCTCTTCTCAATGACGCACTTTCCATaGGTGTACAGAAAATTGTTG +
Preference number: 5 (lower is better)
Translates to: VQHRIPALLNCNAYSLFSMTHFP*VYRKLL
Trigger: CAACAATTTTCTGTACACCAATGGAAAGTGCGTCAT...TGAGAAGAGGGAATATGCATTGCAGTTCAGCAAAGCCGGAATTCTGTGTTGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CAA 90 bp GTTTTCACAAGTGCAAGGGGAGGGATTGTTCTCAGCCAACATTTACCAGTGATTATGACGCACTTTCCATaGGTGTACAGAAAATTGTTG +
Preference number: 5 (lower is better)
Translates to: VFTSARGGIVLSQHLPVIMTHFP*VYRKLL
Trigger: CAACAATTTTCTGTACACCAATGGAAAGTGCGTCAT...AATCACTGGTAAATGTTGGCTGAGAACAATCCCTCCCCTTGCACTTGTGAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CAA 90 bp ACACGCAAAAACACTCCCAATCACGGTGCTTTATACTTACTTTTAATTTCTGCAGTGCAAGGGGAGGGATaGTTCTCAGCCAACATTTAC +
Preference number: 5 (lower is better)
Translates to: TRKNTPNHGALYLLLISAVQGEG*FSANIY
Trigger: GTAAATGTTGGCTGAGAACAATCCCTCCCCTTGCAC...TGCAGAAATTAAAAGTAAGTATAAAGCACCGTGATTGGGAGTGTTTTTGCGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CAA 90 bp TTATGCTCCACACATTGTTTAGGTGCTCGCTTTATTTTTCATGTGCAAACTGTTCTGTTGATGACTTTGTaGTGTCCTGTAATCTCGCCC +
Preference number: 5 (lower is better)
Translates to: LCSTHCLGARFIFHVQTVLLMTL*CPVISP
Trigger: GGGCGAGATTACAGGACACAACAAAGTCATCAACAG...AACAGTTTGCACATGAAAAATAAAGCGAGCACCTAAACAATGTGTGGAGCATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CAA 90 bp CACACGCAAAAACACTCCCAATCACGGTGCTTTATACTTACTTTTAATTTCTGCATTGTGAACTTGAACTaGAATGGGGGTCCCTCAAAG +
Preference number: 5 (lower is better)
Translates to: HTQKHSQSRCFILTFNFCIVNLN*NGGPSK
Trigger: CTTTGAGGGACCCCCATTCAAGTTCAAGTTCACAAT...GCAGAAATTAAAAGTAAGTATAAAGCACCGTGATTGGGAGTGTTTTTGCGTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CAA 90 bp TTATGCTCCACACATTGTTTAGGTGCTCGCTTTATTTTTCATGTGCAAACTGTTCTGACGTCCCAAATCTaGGAAGTTTTGTCCCCAGAA +
Preference number: 5 (lower is better)
Translates to: LCSTHCLGARFIFHVQTVLTSQI*EVLSPE
Trigger: TTCTGGGGACAAAACTTCCAAGATTTGGGACGTCAG...AACAGTTTGCACATGAAAAATAAAGCGAGCACCTAAACAATGTGTGGAGCATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CAA 90 bp ACACGCAAAAACACTCCCAATCACGGTGCTTTATACTTACTTTTAATTTCTGCACTGACGTCCCAAATCTaGGAAGTTTTGTCCCCAGAA +
Preference number: 5 (lower is better)
Translates to: TRKNTPNHGALYLLLISALTSQI*EVLSPE
Trigger: TTCTGGGGACAAAACTTCCAAGATTTGGGACGTCAG...TGCAGAAATTAAAAGTAAGTATAAAGCACCGTGATTGGGAGTGTTTTTGCGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
CDS-3UTR CAA 90 bp TATTTTTCATGTGCAAACTGTTACTGTCTAAAGCTTTCAGAAGAACGTGTACAGCTGTTGATGACTTTGTaGTGTCCTGTAATCTCGCCC +
Preference number: 5 (lower is better)
Translates to: YFSCANCYCLKLSEERVQLLMTL*CPVISP
Trigger: GGGCGAGATTACAGGACACAACAAAGTCATCAACAG...CTGTACACGTTCTTCTGAAAGCTTTAGACAGTAACAGTTTGCACATGAAAAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382452.6
ENST00000499869.7
CDS GCA 72 bp CCGCGCTCGCCGAGAGCCTCCGGGGCCGGCCCGCGCTaGGAATTACACCTCGCCGAGGCCGAGCCCGGGGAC +
Preference number: 6 (lower is better)
Translates to: PRSPRASGAGPR*ELHLAEAEPGD
Trigger: GTCCCCGGGCTCGGCCTCGGCGAGGTGTAATTCGCAGCGCGGGCCGGCCCCGGAGGCTCTCGGCGAGCGCGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000509600.1
CDS GCA 72 bp CAGAGGCCAGCTCGCGCCTGCCCTGCGCGCTGTGGTTaGGGACGCCCCGAACCCGGAAGCGCGGTCCCGCGC +
Preference number: 6 (lower is better)
Translates to: QRPARACPARCG*GRPEPGSAVPR
Trigger: GCGCGGGACCGCGCTTCCGGGTTCGGGGCGTCCGCAACCACAGCGCGCAGGGCAGGCGCGAGCTGGCCTCTG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382451.6
ENST00000382452.6
CDS GCA 72 bp CGGTCCGAGGCCGGGGCTCAGAGGCCAGCTCGCGCCTaGCCTGCGCGCTGTGGTTGCGGACGCCCCGAACCC +
Preference number: 6 (lower is better)
Translates to: RSEAGAQRPARA*PARCGCGRPEP
Trigger: GGGTTCGGGGCGTCCGCAACCACAGCGCGCAGGGCAGGCGCGAGCTGGCCTCTGAGCCCCGGCCTCGGACCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382451.6
ENST00000382452.6
CDS GCA 72 bp CGAGGCCGGGGCTCAGAGGCCAGCTCGCGCCTGCCCTaGGCGCTGTGGTTGCGGACGCCCCGAACCCGGAAG +
Preference number: 6 (lower is better)
Translates to: RGRGSEASSRLP*ALWLRTPRTRK
Trigger: CTTCCGGGTTCGGGGCGTCCGCAACCACAGCGCGCAGGGCAGGCGCGAGCTGGCCTCTGAGCCCCGGCCTCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382451.6
ENST00000382452.6
CDS CAA 72 bp TCAGAGGCCAGCTCGCGCCTGCCCTGCGCGCTGTGGTaGCGGACGCCCCGAACCCGGAAGCGCGGTCCCGCG +
Preference number: 6 (lower is better)
Translates to: SEASSRLPCALW*RTPRTRKRGPA
Trigger: CGCGGGACCGCGCTTCCGGGTTCGGGGCGTCCGCAACCACAGCGCGCAGGGCAGGCGCGAGCTGGCCTCTGA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382451.6
ENST00000382452.6
CDS CCA 72 bp GGGGCACCTGCCCATCCCGCCAGACAGATGGCCTCGTaGGCTCTCCCAGCCTGGACGACCTCCTCCCCAGGC +
Preference number: 6 (lower is better)
Translates to: GAPAHPARQMAS*ALPAWTTSSPG
Trigger: GCCTGGGGAGGAGGTCGTCCAGGCTGGGAGAGCCCACGAGGCCATCTGTCTGGCGGGATGGGCAGGTGCCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264785.11
CDS CCA 72 bp GGTGAATCTGAGGCCGGCTTCCGGGGCTCCGAGGTGTaGCTCCCGGTAGAGGGGGCGTGGCGCCCTCACCCT +
Preference number: 6 (lower is better)
Translates to: GESEAGFRGSEV*LPVEGAWRPHP
Trigger: AGGGTGAGGGCGCCACGCCCCCTCTACCGGGAGCCACACCTCGGAGCCCCGGAAGCCGGCCTCAGATTCACC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509600.1
CDS TCA 72 bp GGAAGCGCGGTCCCGCGCGCGGCTCGCCCCCAGCTTTaGCCATATATAGTCAAGCGCTCGGCTCGGCGGCTG +
Preference number: 6 (lower is better)
Translates to: GSAVPRAARPQL*PYIVKRSARRL
Trigger: CAGCCGCCGAGCCGAGCGCTTGACTATATATGGTCAAAGCTGGGGGCGAGCCGCGCGCGGGACCGCGCTTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382451.6
ENST00000382452.6
CDS GCA 72 bp GGAGGCTGGCGAACACCTTCTCTGCGGAGACACAAATaGGGCGGGGCATGTCAGGGCAGGGCGGGGACGGCG +
Preference number: 6 (lower is better)
Translates to: GGWRTPSLRRHK*GGACQGRAGTA
Trigger: CGCCGTCCCCGCCCTGCCCTGACATGCCCCGCCGCATTTGTGTCTCCGCAGAGAAGGTGTTCGCCAGCCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508079.1
CDS CAA 72 bp CGGAAGCGCGGTCCCGCGCGCGGCTCGCCCCCAGCTTaGACCATATATAGTCAAGCGCTCGGCTCGGCGGCT +
Preference number: 6 (lower is better)
Translates to: RKRGPARGSPPA*TIYSQALGSAA
Trigger: AGCCGCCGAGCCGAGCGCTTGACTATATATGGTCAAAGCTGGGGGCGAGCCGCGCGCGGGACCGCGCTTCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382451.6
ENST00000382452.6
CDS TCA 72 bp GGAGCCGGCTGCAGTGAAGGCAGTGGTGGGAGGGCCTaGGGCAAAGCACTTCTAGACCCCCTGTTGGGCGGG +
Preference number: 6 (lower is better)
Translates to: GAGCSEGSGGRA*GKALLDPLLGG
Trigger: CCCGCCCAACAGGGGGTCTAGAAGTGCTTTGCCTCAGGCCCTCCCACCACTGCCTTCACTGCAGCCGGCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515743.5
CDS CCA 72 bp CACATACAGGGGCACCTGCCCATCCCGCCAGACAGATaGCCTCGTGGGCTCTCCCAGCCTGGACGACCTCCT +
Preference number: 6 (lower is better)
Translates to: HIQGHLPIPPDR*PRGLSQPGRPP
Trigger: AGGAGGTCGTCCAGGCTGGGAGAGCCCACGAGGCCATCTGTCTGGCGGGATGGGCAGGTGCCCCTGTATGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264785.11
CDS CCA 72 bp CGTCGTGGGAGTAGGCCACGTCGGTCACGGGGCCCTTaGCCTCTAGGAGCTTGCCCTCATCCTTCAGCGTGG +
Preference number: 6 (lower is better)
Translates to: RRGSRPRRSRGP*PLGACPHPSAW
Trigger: CCACGCTGAAGGATGAGGGCAAGCTCCTAGAGGCCAAGGGCCCCGTGACCGACGTGGCCTACTCCCACGACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
ENST00000502962.5
ENST00000515743.5
CDS CCA 72 bp CTGTGGTTCACCTCTGCCGACGCCTCCCACAGGCTCTaGCAGGGTGGTGTCATGTGTCCCTCCCTGGCCCCA +
Preference number: 6 (lower is better)
Translates to: LWFTSADASHRL*QGGVMCPSLAP
Trigger: TGGGGCCAGGGAGGGACACATGACACCACCCTGCCAGAGCCTGTGGGAGGCGTCGGCAGAGGTGAACCACAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515743.5
CDS CCA 72 bp CTCAGCTCAGCAGGTGTCCTGTGCATGGGGCCCCCGTaGTCCCTCAGTACGGCCAGCAGCGCAGCTGGTGTT +
Preference number: 6 (lower is better)
Translates to: LSSAGVLCMGPP*SLSTASSAAGV
Trigger: AACACCAGCTGCGCTGCTGGCCGTACTGAGGGACCACGGGGGCCCCATGCACAGGACACCTGCTGAGCTGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515743.5
CDS CAA 72 bp GCCGAACTCCGCTTCCTTGGCCAGCACAGCCTCGCCTaGCCGCTGACTTCGCACTGGCTCCTCCAAGCCAGC +
Preference number: 6 (lower is better)
Translates to: AELRFLGQHSLA*PLTSHWLLQAS
Trigger: GCTGGCTTGGAGGAGCCAGTGCGAAGTCAGCGGCAAGGCGAGGCTGTGCTGGCCAAGGAAGCGGAGTTCGGC
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515743.5
CDS CAA 90 bp GGGGCCCCCGTGGTCCCTCAGTACGGCCAGCAGCGCAGCTGGTGTTaGCTGGATGGAAGGAGACCCACAACTCTTCCGGGCCACCTGTCT +
Preference number: 6 (lower is better)
Translates to: GAPVVPQYGQQRSWC*LDGRRPTTLPGHLS
Trigger: AGACAGGTGGCCCGGAAGAGTTGTGGGTCTCCTTCCATCCAGCAAACACCAGCTGCGCTGCTGGCCGTACTGAGGGACCACGGGGGCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515743.5
CDS GCA 72 bp GATGGGGGAGGTCTCACGCTCACATACAGGGGCACCTaGCCATCCCGCCAGACAGATGGCCTCGTGGGCTCT +
Preference number: 6 (lower is better)
Translates to: DGGGLTLTYRGT*PSRQTDGLVGS
Trigger: AGAGCCCACGAGGCCATCTGTCTGGCGGGATGGGCAGGTGCCCCTGTATGTGAGCGTGAGACCTCCCCCATC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264785.11
CDS GCA 72 bp CCTCTCCACCTGCGGGAGGCTGGCGAACACCTTCTCTaGGGAGACACAAATGCGGCGGGGCATGTCAGGGCA +
Preference number: 6 (lower is better)
Translates to: PLHLREAGEHLL*GDTNAAGHVRA
Trigger: TGCCCTGACATGCCCCGCCGCATTTGTGTCTCCGCAGAGAAGGTGTTCGCCAGCCTCCCGCAGGTGGAGAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508079.1
CDS GCA 72 bp TCGCCGCCGATGATCTTGGAGACGCCCCTCTCCACCTaGGGGAGGCTGGCGAACACCTTCTCTGCGGAGACA +
Preference number: 6 (lower is better)
Translates to: SPPMILETPLST*GRLANTFSAET
Trigger: TGTCTCCGCAGAGAAGGTGTTCGCCAGCCTCCCGCAGGTGGAGAGGGGCGTCTCCAAGATCATCGGCGGCGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508079.1
CDS CAA 72 bp AACACCTTCTTGATCTCGTACGGCATCCTCGCCCACTaGTTACCGCGCCGCGCTCGCCGAGAGCCTCCGGGG +
Preference number: 6 (lower is better)
Translates to: NTFLISYGILAH*LPRRARREPPG
Trigger: CCCCGGAGGCTCTCGGCGAGCGCGGCGCGGTAACAAGTGGGCGAGGATGCCGTACGAGATCAAGAAGGTGTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
ENST00000509600.1
CDS CAA 72 bp GCCACGTCGGTCACGGGGCCCTTGGCCTCTAGGAGCTaGCCCTCATCCTTCAGCGTGGTGCCCAGGATGGAA +
Preference number: 6 (lower is better)
Translates to: ATSVTGPLASRS*PSSFSVVPRME
Trigger: TTCCATCCTGGGCACCACGCTGAAGGATGAGGGCAAGCTCCTAGAGGCCAAGGGCCCCGTGACCGACGTGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
ENST00000502962.5
ENST00000515743.5
CDS CAA 90 bp TCTCTCGCTGCCGAACTCCGCTTCCTTGGCCAGCACAGCCTCGCCTaGCCGCTGACTTCGCACTGGCTCCTCCAAGCCAGCCTGAGCTTC +
Preference number: 6 (lower is better)
Translates to: SLAAELRFLGQHSLA*PLTSHWLLQASLSF
Trigger: GAAGCTCAGGCTGGCTTGGAGGAGCCAGTGCGAAGTCAGCGGCAAGGCGAGGCTGTGCTGGCCAAGGAAGCGGAGTTCGGCAGCGAGAGA
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515743.5
CDS GCA 72 bp CCACGTCGGTCACGGGGCCCTTGGCCTCTAGGAGCTTaGCCTCATCCTTCAGCGTGGTGCCCAGGATGGAAT +
Preference number: 6 (lower is better)
Translates to: PRRSRGPWPLGA*PHPSAWCPGWN
Trigger: ATTCCATCCTGGGCACCACGCTGAAGGATGAGGGCAAGCTCCTAGAGGCCAAGGGCCCCGTGACCGACGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
ENST00000502962.5
ENST00000515743.5
CDS GCA 72 bp TCGCCGCCGATGATCTTGGAGACGCCCCTCTCCACCTaGGGGAGGCTGGCGAACACCTTCTCTGTTGACTGC +
Preference number: 6 (lower is better)
Translates to: SPPMILETPLST*GRLANTFSVDC
Trigger: GCAGTCAACAGAGAAGGTGTTCGCCAGCCTCCCGCAGGTGGAGAGGGGCGTCTCCAAGATCATCGGCGGCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505851.5
ENST00000514319.5
CDS GCA 72 bp GGGACTCCAATGCGTAAATCCCACCGTCGTGGGCCTTaGTTCCGCCCAGCGCGCACACCTTCTCCCCAGTCT +
Preference number: 6 (lower is better)
Translates to: GTPMRKSHRRGP*FRPARTPSPQS
Trigger: AGACTGGGGAGAAGGTGTGCGCGCTGGGCGGAAGCAAGGCCCACGACGGTGGGATTTACGCATTGGAGTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509695.1
ENST00000515743.5
CDS GCA 72 bp CCCCAGGACCCCAAATCCAAGTCTGTGGTTCACCTCTaGCGACGCCTCCCACAGGCTCTGGCAGGGTGGTGT +
Preference number: 6 (lower is better)
Translates to: PQDPKSKSVVHL*RRLPQALAGWC
Trigger: ACACCACCCTGCCAGAGCCTGTGGGAGGCGTCGGCAGAGGTGAACCACAGACTTGGATTTGGGGTCCTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515743.5
CDS GCA 72 bp AAAGTGAGGCCTTCACTCAGCTCAGCAGGTGTCCTGTaGATGGGGCCCCCGTGGTCCCTCAGTACGGCCAGC +
Preference number: 6 (lower is better)
Translates to: KVRPSLSSAGVL*MGPPWSLSTAS
Trigger: GCTGGCCGTACTGAGGGACCACGGGGGCCCCATGCACAGGACACCTGCTGAGCTGAGTGAAGGCCTCACTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515743.5
CDS CCA 72 bp GAAGTGGAGAGGAAGGCGAATTATCCCATCCCAAGGTaGCTCCGGAGCAGAACCGCGCCCGGGGTAGGGGGT +
Preference number: 6 (lower is better)
Translates to: EVERKANYPIPR*LRSRTAPGVGG
Trigger: ACCCCCTACCCCGGGCGCGGTTCTGCTCCGGAGCCACCTTGGGATGGGATAATTCGCCTTCCTCTCCACTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509600.1
CDS CCA 72 bp GGGGCTGCAGCAGTCTCAGTCCAGCCTCATCCCTGGTaGACAACTGACGGTGTCCGGTCCACACTCCTGCCT +
Preference number: 6 (lower is better)
Translates to: GAAAVSVQPHPW*TTDGVRSTLLP
Trigger: AGGCAGGAGTGTGGACCGGACACCGTCAGTTGTCCACCAGGGATGAGGCTGGACTGAGACTGCTGCAGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515743.5
CDS CCA 72 bp AGCGGGGCTGCAGCAGTCTCAGTCCAGCCTCATCCCTaGTGGACAACTGACGGTGTCCGGTCCACACTCCTG +
Preference number: 6 (lower is better)
Translates to: SGAAAVSVQPHP*WTTDGVRSTLL
Trigger: CAGGAGTGTGGACCGGACACCGTCAGTTGTCCACCAGGGATGAGGCTGGACTGAGACTGCTGCAGCCCCGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515743.5
CDS CCA 72 bp GGCCAGCACAGCCTCGCCTTGCCGCTGACTTCGCACTaGCTCCTCCAAGCCAGCCTGAGCTTCCTTGAAGTG +
Preference number: 6 (lower is better)
Translates to: GQHSLALPLTSH*LLQASLSFLEV
Trigger: CACTTCAAGGAAGCTCAGGCTGGCTTGGAGGAGCCAGTGCGAAGTCAGCGGCAAGGCGAGGCTGTGCTGGCC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515743.5
CDS CAA 72 bp CCACGGCGTATCCCCCGGGGCCGACGGCTACGCACTTaGGCTGAACGTCCAGTTTCACAACTCCTTGTCCGC +
Preference number: 6 (lower is better)
Translates to: PRRIPRGRRLRT*AERPVSQLLVR
Trigger: GCGGACAAGGAGTTGTGAAACTGGACGTTCAGCCAAAGTGCGTAGCCGTCGGCCCCGGGGGATACGCCGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
ENST00000502962.5
ENST00000515743.5
CDS CAA 90 bp TGCACACGACCACGGCGTATCCCCCGGGGCCGACGGCTACGCACTTaGGCTGAACGTCCAGTTTCACAACTCCTTGTCCGCTGTAGTCCC +
Preference number: 6 (lower is better)
Translates to: CTRPRRIPRGRRLRT*AERPVSQLLVRCSP
Trigger: GGGACTACAGCGGACAAGGAGTTGTGAAACTGGACGTTCAGCCAAAGTGCGTAGCCGTCGGCCCCGGGGGATACGCCGTGGTCGTGTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
ENST00000502962.5
ENST00000515743.5
CDS CAA 90 bp CCTGCTTTGTCTCTCCTCCCTTCCAGACCGGGCTGCCTTCCCTCTTaGCCTGTCCTGCACCTGAAGCCTGCAGCTGGGGAATGGGCTCTG +
Preference number: 6 (lower is better)
Translates to: PALSLLPSRPGCLPS*PVLHLKPAAGEWAL
Trigger: CAGAGCCCATTCCCCAGCTGCAGGCTTCAGGTGCAGGACAGGCAAAGAGGGAAGGCAGCCCGGTCTGGAAGGGAGGAGAGACAAAGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515743.5
CDS GCA 72 bp TCGCCGCCGATGATCTTGGAGACGCCCCTCTCCACCTaGGGGAGGCTGGCGAACACCTTCTTGATCTCGTAC +
Preference number: 6 (lower is better)
Translates to: SPPMILETPLST*GRLANTFLISY
Trigger: GTACGAGATCAAGAAGGTGTTCGCCAGCCTCCCGCAGGTGGAGAGGGGCGTCTCCAAGATCATCGGCGGCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
ENST00000509600.1
CDS GCA 72 bp TACCGCACGGTGTCGTCCATGCTGCAGCTGATGAGCTaGCCCGACTCATCCACGGTCATCCTGGACACCTGG +
Preference number: 6 (lower is better)
Translates to: YRTVSSMLQLMS*PDSSTVILDTW
Trigger: CCAGGTGTCCAGGATGACCGTGGATGAGTCGGGGCAGCTCATCAGCTGCAGCATGGACGACACCGTGCGGTA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
ENST00000502962.5
ENST00000515743.5
CDS GCA 72 bp TTGACAGAGGCATCATGGGAGGTCGTGACCAGCGTGTaGTCGTCCAGCCAGGCCAGGCTGCTGACATGGTGC +
Preference number: 6 (lower is better)
Translates to: LTEASWEVVTSV*SSSQARLLTWC
Trigger: GCACCATGTCAGCAGCCTGGCCTGGCTGGACGAGCACACGCTGGTCACGACCTCCCATGATGCCTCTGTCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
ENST00000502962.5
ENST00000515743.5
CDS GCA 72 bp TGTCAAAGGGCCTCACAGGGCAGTTCCCGAGAGAGCTaGAGGAAGGAGCCGGCTGCAGTGAAGGCAGTGGTG +
Preference number: 6 (lower is better)
Translates to: CQRASQGSSRES*RKEPAAVKAVV
Trigger: CACCACTGCCTTCACTGCAGCCGGCTCCTTCCTGCAGCTCTCTCGGGAACTGCCCTGTGAGGCCCTTTGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515743.5
CDS GCA 72 bp CCCCTTCTGCTGTTACCCACCATGAGGGAGCCGTCATaGACTGAGGGCCTGTTCCCGTCGGGGTTAGCCGAT +
Preference number: 6 (lower is better)
Translates to: PLLLLPTMREPS*TEGLFPSGLAD
Trigger: ATCGGCTAACCCCGACGGGAACAGGCCCTCAGTGCATGACGGCTCCCTCATGGTGGGTAACAGCAGAAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515743.5
CDS CCA 72 bp CACGGCGTATCCCCCGGGGCCGACGGCTACGCACTTTaGCTGAACGTCCAGTTTCACAACTCCTTGTCCGCT +
Preference number: 6 (lower is better)
Translates to: HGVSPGADGYAL*LNVQFHNSLSA
Trigger: AGCGGACAAGGAGTTGTGAAACTGGACGTTCAGCCAAAGTGCGTAGCCGTCGGCCCCGGGGGATACGCCGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
ENST00000502962.5
ENST00000515743.5
CDS CCA 72 bp GGAGCTTGCCCTCATCCTTCAGCGTGGTGCCCAGGATaGAATACAGGCGGACGTTGCCGTCCACACCCCCAA +
Preference number: 6 (lower is better)
Translates to: GACPHPSAWCPG*NTGGRCRPHPQ
Trigger: TTGGGGGTGTGGACGGCAACGTCCGCCTGTATTCCATCCTGGGCACCACGCTGAAGGATGAGGGCAAGCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
ENST00000502962.5
ENST00000515743.5
CDS CCA 72 bp CACATCGAGTTCTCTCGCTGCCGAACTCCGCTTCCTTaGCCAGCACAGCCTCGCCTTGCCGCTGACTTCGCA +
Preference number: 6 (lower is better)
Translates to: HIEFSRCRTPLP*PAQPRLAADFA
Trigger: TGCGAAGTCAGCGGCAAGGCGAGGCTGTGCTGGCCAAGGAAGCGGAGTTCGGCAGCGAGAGAACTCGATGTG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515743.5
CDS CCA 72 bp GCCCCCGTGGTCCCTCAGTACGGCCAGCAGCGCAGCTaGTGTTTGCTGGATGGAAGGAGACCCACAACTCTT +
Preference number: 6 (lower is better)
Translates to: APVVPQYGQQRS*CLLDGRRPTTL
Trigger: AAGAGTTGTGGGTCTCCTTCCATCCAGCAAACACCAGCTGCGCTGCTGGCCGTACTGAGGGACCACGGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515743.5
CDS CAA 72 bp AGAAAATTGTTGCCCTTAGGGTCGCCGCCGATGATCTaGGAGACGCCCCTCTCCACCTGCGGGAGGCTGGCG +
Preference number: 6 (lower is better)
Translates to: RKLLPLGSPPMI*ETPLSTCGRLA
Trigger: CGCCAGCCTCCCGCAGGTGGAGAGGGGCGTCTCCAAGATCATCGGCGGCGACCCTAAGGGCAACAATTTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
ENST00000505851.5
ENST00000508079.1
ENST00000509600.1
ENST00000514319.5
CDS CAA 72 bp GTGGTCCCTCAGTACGGCCAGCAGCGCAGCTGGTGTTaGCTGGATGGAAGGAGACCCACAACTCTTCCGGGC +
Preference number: 6 (lower is better)
Translates to: VVPQYGQQRSWC*LDGRRPTTLPG
Trigger: GCCCGGAAGAGTTGTGGGTCTCCTTCCATCCAGCAAACACCAGCTGCGCTGCTGGCCGTACTGAGGGACCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515743.5
CDS CAA 90 bp GGGTGGCACAGGTGCCCAGGAGCGCCTTCAACCACCAAGCATGACTaGGCTGTGAGGCCAGGCTTTAGCACTCTGTCCACATCACCAGGC +
Preference number: 6 (lower is better)
Translates to: GWHRCPGAPSTTKHD*AVRPGFSTLSTSPG
Trigger: GCCTGGTGATGTGGACAGAGTGCTAAAGCCTGGCCTCACAGCCAAGTCATGCTTGGTGGTTGAAGGCGCTCCTGGGCACCTGTGCCACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515743.5
CDS GCA 72 bp CTGAGCAGGTGGTCCTTCTGCCATAGGCAGCCCAGCTaGTGGTCCAGAACCGTGGAGCCCATGGGAAATGTG +
Preference number: 6 (lower is better)
Translates to: LSRWSFCHRQPS*WSRTVEPMGNV
Trigger: CACATTTCCCATGGGCTCCACGGTTCTGGACCAGCAGCTGGGCTGCCTATGGCAGAAGGACCACCTGCTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
ENST00000502962.5
ENST00000504739.5
ENST00000505543.5
ENST00000506246.5
ENST00000508949.5
ENST00000510848.5
ENST00000515743.5
CDS GCA 72 bp TGGCCTCTAGGAGCTTGCCCTCATCCTTCAGCGTGGTaGCCAGGATGGAATACAGGCGGACGTTGCCGTCCA +
Preference number: 6 (lower is better)
Translates to: WPLGACPHPSAW*PGWNTGGRCRP
Trigger: TGGACGGCAACGTCCGCCTGTATTCCATCCTGGGCACCACGCTGAAGGATGAGGGCAAGCTCCTAGAGGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
ENST00000502962.5
ENST00000515743.5
CDS CCA 72 bp AGCAGGTGGTCCTTCTGCCATAGGCAGCCCAGCTGCTaGTCCAGAACCGTGGAGCCCATGGGAAATGTGCTG +
Preference number: 6 (lower is better)
Translates to: SRWSFCHRQPSC*SRTVEPMGNVL
Trigger: CAGCACATTTCCCATGGGCTCCACGGTTCTGGACCAGCAGCTGGGCTGCCTATGGCAGAAGGACCACCTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
ENST00000502962.5
ENST00000504739.5
ENST00000505543.5
ENST00000506246.5
ENST00000508949.5
ENST00000510848.5
ENST00000515743.5
CDS CCA 72 bp GACTCATCCACGGTCATCCTGGACACCTGGTTCGTGTaGCCTTTCCCAGCGAAGGAGTCGTTCTCCCCCGTC +
Preference number: 6 (lower is better)
Translates to: DSSTVILDTWFV*PFPAKESFSPV
Trigger: GACGGGGGAGAACGACTCCTTCGCTGGGAAAGGCCACACGAACCAGGTGTCCAGGATGACCGTGGATGAGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
ENST00000502962.5
ENST00000515743.5
CDS CCA 72 bp AGCTGCCCCGACTCATCCACGGTCATCCTGGACACCTaGTTCGTGTGGCCTTTCCCAGCGAAGGAGTCGTTC +
Preference number: 6 (lower is better)
Translates to: SCPDSSTVILDT*FVWPFPAKESF
Trigger: GAACGACTCCTTCGCTGGGAAAGGCCACACGAACCAGGTGTCCAGGATGACCGTGGATGAGTCGGGGCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
ENST00000502962.5
ENST00000515743.5
CDS CCA 72 bp CCTTGGCCTCTAGGAGCTTGCCCTCATCCTTCAGCGTaGTGCCCAGGATGGAATACAGGCGGACGTTGCCGT +
Preference number: 6 (lower is better)
Translates to: PWPLGACPHPSA*CPGWNTGGRCR
Trigger: ACGGCAACGTCCGCCTGTATTCCATCCTGGGCACCACGCTGAAGGATGAGGGCAAGCTCCTAGAGGCCAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
ENST00000502962.5
ENST00000515743.5
CDS CCA 72 bp AGCGTGTGCTCGTCCAGCCAGGCCAGGCTGCTGACATaGTGCAGCCGGTGTGCATCTTGGATCTTGACTCTG +
Preference number: 6 (lower is better)
Translates to: SVCSSSQARLLT*CSRCASWILTL
Trigger: CAGAGTCAAGATCCAAGATGCACACCGGCTGCACCATGTCAGCAGCCTGGCCTGGCTGGACGAGCACACGCT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
ENST00000502962.5
CDS CCA 72 bp GCATACATCCTGATGAAGGAAGCCTTGGCCTGCGGGTaGCACAGGTGCCCAGGAGCGCCTTCAACCACCAAG +
Preference number: 6 (lower is better)
Translates to: AYILMKEALACG*HRCPGAPSTTK
Trigger: CTTGGTGGTTGAAGGCGCTCCTGGGCACCTGTGCCACCCGCAGGCCAAGGCTTCCTTCATCAGGATGTATGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515743.5
CDS TCA 72 bp GTTTCACAACTCCTTGTCCGCTGTAGTCCCGCAGCATaGGGCTGGTGTACCGCACGGTGTCGTCCATGCTGC +
Preference number: 6 (lower is better)
Translates to: VSQLLVRCSPAA*GWCTARCRPCC
Trigger: GCAGCATGGACGACACCGTGCGGTACACCAGCCTCATGCTGCGGGACTACAGCGGACAAGGAGTTGTGAAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
ENST00000502962.5
ENST00000515743.5
CDS TCA 72 bp AGCTCACCCCAAATGCCCGAATCACCCAAGCCCAGATaGGTGGGTGGGACAGTGGACGCTGATGGCTCTTGC +
Preference number: 6 (lower is better)
Translates to: SSPQMPESPKPR*VGGTVDADGSC
Trigger: GCAAGAGCCATCAGCGTCCACTGTCCCACCCACTCATCTGGGCTTGGGTGATTCGGGCATTTGGGGTGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515743.5
CDS GCA 72 bp GTGTGCTCGTCCAGCCAGGCCAGGCTGCTGACATGGTaGAGCCGGTGTGCATCTTGGATCTTGACTCTGGTT +
Preference number: 6 (lower is better)
Translates to: VCSSSQARLLTW*SRCASWILTLV
Trigger: AACCAGAGTCAAGATCCAAGATGCACACCGGCTGCACCATGTCAGCAGCCTGGCCTGGCTGGACGAGCACAC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
ENST00000502962.5
CDS CCA 72 bp CTCCGGAGGCAATGTAGAATCCGCTGGGCGCATACTTaGCCACCACCACCTGATGGGCGTGCTCTGTGTAGA +
Preference number: 6 (lower is better)
Translates to: LRRQCRIRWAHT*PPPPDGRALCR
Trigger: TCTACACAGAGCACGCCCATCAGGTGGTGGTGGCCAAGTATGCGCCCAGCGGATTCTACATTGCCTCCGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264785.11
ENST00000382452.6
ENST00000499869.7
ENST00000505851.5
ENST00000508079.1
ENST00000514319.5
ENST00000515018.1
CDS CCA 72 bp CTCAGTTTCCTCATCAAGAAGGAGCAGACAAGGACCTaGGTGAATCTGAGGCCGGCTTCCGGGGCTCCGAGG +
Preference number: 6 (lower is better)
Translates to: LSFLIKKEQTRT*VNLRPASGAPR
Trigger: CCTCGGAGCCCCGGAAGCCGGCCTCAGATTCACCCAGGTCCTTGTCTGCTCCTTCTTGATGAGGAAACTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509600.1
CDS CCA 72 bp TCCTGGAGCCTCATTCAGGCAAATGAAGACCAAAGCTaGGCTACGGTCCCTCAGGACGAGGGGCACACAGGG +
Preference number: 6 (lower is better)
Translates to: SWSLIQANEDQS*ATVPQDEGHTG
Trigger: CCCTGTGTGCCCCTCGTCCTGAGGGACCGTAGCCCAGCTTTGGTCTTCATTTGCCTGAATGAGGCTCCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509695.1
CDS CAA 90 bp TTGGTGTACAGAAAATTGTTGCCCTTAGGGTCGCCGCCGATGATCTaGGAGACGCCCCTCTCCACCTGCGGGAGGCTGGCGAACACCTTC +
Preference number: 6 (lower is better)
Translates to: LVYRKLLPLGSPPMI*ETPLSTCGRLANTF
Trigger: GAAGGTGTTCGCCAGCCTCCCGCAGGTGGAGAGGGGCGTCTCCAAGATCATCGGCGGCGACCCTAAGGGCAACAATTTTCTGTACACCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
ENST00000505851.5
ENST00000508079.1
ENST00000509600.1
ENST00000514319.5
CDS CAA 90 bp CTGGGCTACGGTCCCTCAGGACGAGGGGCACACAGGGAATGCTGCTaGCATTTCAGCTCAGGCACAGCATCATGGAGTTCTGCTTCAGCT +
Preference number: 6 (lower is better)
Translates to: LGYGPSGRGAHRECC*HFSSGTASWSSASA
Trigger: AGCTGAAGCAGAACTCCATGATGCTGTGCCTGAGCTGAAATGCAAGCAGCATTCCCTGTGTGCCCCTCGTCCTGAGGGACCGTAGCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509695.1
CDS TCA 72 bp GCCAGGCCCAGCTCAGCCTGCGGTTCCGTGACAAAATaGAGCCTGTTTCACTACGAACGGGGCATCCTTGGA +
Preference number: 6 (lower is better)
Translates to: ARPSSACGSVTK*SLFHYERGILG
Trigger: TCCAAGGATGCCCCGTTCGTAGTGAAACAGGCTTCATTTTGTCACGGAACCGCAGGCTGAGCTGGGCCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505543.5
CDS TCA 72 bp GTGGTCCCATTAGGTGGTAGCCACAAGAGCAGAGTCTaGGAGCTGCCGCGTGTTCAGCTGCATACAGGGAGC +
Preference number: 6 (lower is better)
Translates to: VVPLGGSHKSRV*ELPRVQLHTGS
Trigger: GCTCCCTGTATGCAGCTGAACACGCGGCAGCTCTCAGACTCTGCTCTTGTGGCTACCACCTAATGGGACCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508949.5
CDS TCA 72 bp CTAAAAATAGCCCTTTCCACACGGAGGCCCGGCCAGTaGACAAAGAGGGAGAGGGATTGGGGAACCTCCCGG +
Preference number: 6 (lower is better)
Translates to: LKIALSTRRPGQ*TKRERDWGTSR
Trigger: CCGGGAGGTTCCCCAATCCCTCTCCCTCTTTGTTCACTGGCCGGGCCTCCGTGTGGAAAGGGCTATTTTTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515743.5
CDS GCA 72 bp ACAAGAGCAGAGTCTGAGAGCTGCCGCGTGTTCAGCTaGATACAGGGAGCCTCCCTATGCTTTCACCTGCCC +
Preference number: 6 (lower is better)
Translates to: TRAESESCRVFS*IQGASLCFHLP
Trigger: GGGCAGGTGAAAGCATAGGGAGGCTCCCTGTATGCAGCTGAACACGCGGCAGCTCTCAGACTCTGCTCTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505543.5
ENST00000508949.5
CDS GCA 72 bp GAGGGTTTGGACAACACAGAGCTGCCTTACAATACGTaGATGGCCACGCGGGGACATCACAACCCCCTCAGG +
Preference number: 6 (lower is better)
Translates to: EGLDNTELPYNT*MATRGHHNPLR
Trigger: CCTGAGGGGGTTGTGATGTCCCCGCGTGGCCATGCACGTATTGTAAGGCAGCTCTGTGTTGTCCAAACCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515743.5
CDS GCA 72 bp TGCCTCCACCCAACCGAGATGCCAATAGTGAGACGGTaGCTGTGCGCTTATGGCTCCTCTGTGGCTAGCTCT +
Preference number: 6 (lower is better)
Translates to: CLHPTEMPIVRR*LCAYGSSVASS
Trigger: AGAGCTAGCCACAGAGGAGCCATAAGCGCACAGGCACCGTCTCACTATTGGCATCTCGGTTGGGTGGAGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515743.5
CDS CCA 72 bp CACCCCAAATGCCCGAATCACCCAAGCCCAGATGAGTaGGTGGGACAGTGGACGCTGATGGCTCTTGCTACA +
Preference number: 6 (lower is better)
Translates to: HPKCPNHPSPDE*VGQWTLMALAT
Trigger: TGTAGCAAGAGCCATCAGCGTCCACTGTCCCACCCACTCATCTGGGCTTGGGTGATTCGGGCATTTGGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515743.5
CDS CAA 72 bp TTACAGGTAGGCTGTGATGACCCTGGGTCCTGGGGCTaGGGTCTCAAGGCTTGCCACTGGTATCTCAGCTCC +
Preference number: 6 (lower is better)
Translates to: LQVGCDDPGSWG*GLKACHWYLSS
Trigger: GGAGCTGAGATACCAGTGGCAAGCCTTGAGACCCAAGCCCCAGGACCCAGGGTCATCACAGCCTACCTGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514319.5
CDS CAA 72 bp AGGTGCCCAGGAGCGCCTTCAACCACCAAGCATGACTaGGCTGTGAGGCCAGGCTTTAGCACTCTGTCCACA +
Preference number: 6 (lower is better)
Translates to: RCPGAPSTTKHD*AVRPGFSTLST
Trigger: TGTGGACAGAGTGCTAAAGCCTGGCCTCACAGCCAAGTCATGCTTGGTGGTTGAAGGCGCTCCTGGGCACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515743.5
CDS CAA 90 bp TACTCCAATTTACAGGTAGGCTGTGATGACCCTGGGTCCTGGGGCTaGGGTCTCAAGGCTTGCCACTGGTATCTCAGCTCCTGGCCCACA +
Preference number: 6 (lower is better)
Translates to: YSNLQVGCDDPGSWG*GLKACHWYLSSWPT
Trigger: TGTGGGCCAGGAGCTGAGATACCAGTGGCAAGCCTTGAGACCCAAGCCCCAGGACCCAGGGTCATCACAGCCTACCTGTAAATTGGAGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514319.5
CDS CAA 90 bp CGATGGGGTCCACCTCCTATCTGTGTCAACATGGCCCACGGTCCCTaGTCCATGTCAGTCCATAGGGTCCACATTCCCTGTGTCAAAGGG +
Preference number: 6 (lower is better)
Translates to: RWGPPPICVNMAHGP*SMSVHRVHIPCVKG
Trigger: CCCTTTGACACAGGGAATGTGGACCCTATGGACTGACATGGACAAGGGACCGTGGGCCATGTTGACACAGATAGGAGGTGGACCCCATCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515743.5
CDS TCA 72 bp GCCTTTCCCAGCGAAGGAGTCGTTCTCCCCCGTCTCTaGATCCCAGTAATTAATGTGTCCGTCGTGGCTCCC +
Preference number: 6 (lower is better)
Translates to: AFPSEGVVLPRL*IPVINVSVVAP
Trigger: GGGAGCCACGACGGACACATTAATTACTGGGATTCAGAGACGGGGGAGAACGACTCCTTCGCTGGGAAAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
ENST00000502962.5
ENST00000515743.5
CDS TCA 72 bp CAAATCTGTTCCCATCAGGAGAGAATCGCACACAGTTaGCAAAGCGGCTGTGGTCCAGCGGGGCTGCAGCAG +
Preference number: 6 (lower is better)
Translates to: QICSHQERIAHS*QSGCGPAGLQQ
Trigger: CTGCTGCAGCCCCGCTGGACCACAGCCGCTTTGTCAACTGTGTGCGATTCTCTCCTGATGGGAACAGATTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506246.5
CDS TCA 72 bp ACCTACCCATTAGGTGGTAGCCACAAGAGCAGAGTCTaGGAGCTGCCGCGTGTTCAGCTGCATACAGGGAGC +
Preference number: 6 (lower is better)
Translates to: TYPLGGSHKSRV*ELPRVQLHTGS
Trigger: GCTCCCTGTATGCAGCTGAACACGCGGCAGCTCTCAGACTCTGCTCTTGTGGCTACCACCTAATGGGTAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505543.5
CDS TCA 72 bp CAGGAGCGCCTTCAACCACCAAGCATGACTTGGCTGTaGGGCCAGGCTTTAGCACTCTGTCCACATCACCAG +
Preference number: 6 (lower is better)
Translates to: QERLQPPSMTWL*GQALALCPHHQ
Trigger: CTGGTGATGTGGACAGAGTGCTAAAGCCTGGCCTCACAGCCAAGTCATGCTTGGTGGTTGAAGGCGCTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515743.5
CDS GCA 72 bp TCATCGCTTCCCGTGGCCAGCCGGTATGGCCGGCTCTaGTTGATGTCCACGCTGTTGATGACTTTGTTGTGT +
Preference number: 6 (lower is better)
Translates to: SSLPVASRYGRL*LMSTLLMTLLC
Trigger: ACACAACAAAGTCATCAACAGCGTGGACATCAAGCAGAGCCGGCCATACCGGCTGGCCACGGGAAGCGATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264785.11
ENST00000382452.6
ENST00000499869.7
ENST00000505851.5
ENST00000508079.1
CDS GCA 72 bp GTCCCTCAGGACGAGGGGCACACAGGGAATGCTGCTTaGATTTCAGCTCAGGCACAGCATCATGGAGTTCTG +
Preference number: 6 (lower is better)
Translates to: VPQDEGHTGNAA*ISAQAQHHGVL
Trigger: CAGAACTCCATGATGCTGTGCCTGAGCTGAAATGCAAGCAGCATTCCCTGTGTGCCCCTCGTCCTGAGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509695.1
CDS GCA 72 bp TACGGTCCCTCAGGACGAGGGGCACACAGGGAATGCTaGTTGCATTTCAGCTCAGGCACAGCATCATGGAGT +
Preference number: 6 (lower is better)
Translates to: YGPSGRGAHREC*LHFSSGTASWS
Trigger: ACTCCATGATGCTGTGCCTGAGCTGAAATGCAAGCAGCATTCCCTGTGTGCCCCTCGTCCTGAGGGACCGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509695.1
CDS GCA 72 bp TACTCCAGTTCCAGGTCCCAGAAGCGAGGACATTCCTaGTCGCGCAAACCCCAGGACCCCAAATCCAAGTCT +
Preference number: 6 (lower is better)
Translates to: YSSSRSQKRGHS*SRKPQDPKSKS
Trigger: AGACTTGGATTTGGGGTCCTGGGGTTTGCGCGAGCAGGAATGTCCTCGCTTCTGGGACCTGGAACTGGAGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515743.5
CDS CCA 72 bp TTAGCCGATGGGGTCCACCTCCTATCTGTGTCAACATaGCCCACGGTCCCTTGTCCATGTCAGTCCATAGGG +
Preference number: 6 (lower is better)
Translates to: LADGVHLLSVST*PTVPCPCQSIG
Trigger: CCCTATGGACTGACATGGACAAGGGACCGTGGGCCATGTTGACACAGATAGGAGGTGGACCCCATCGGCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515743.5
CDS CCA 72 bp GTTTGGACAACACAGAGCTGCCTTACAATACGTGCATaGCCACGCGGGGACATCACAACCCCCTCAGGGAGA +
Preference number: 6 (lower is better)
Translates to: VWTTQSCLTIRA*PRGDITTPSGR
Trigger: TCTCCCTGAGGGGGTTGTGATGTCCCCGCGTGGCCATGCACGTATTGTAAGGCAGCTCTGTGTTGTCCAAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515743.5
CDS CAA 72 bp GCAAATCTGTTCCCATCAGGAGAGAATCGCACACAGTaGACAAAGCGGCTGTGGTCCAGCGGGGCTGCAGCA +
Preference number: 6 (lower is better)
Translates to: ANLFPSGENRTQ*TKRLWSSGAAA
Trigger: TGCTGCAGCCCCGCTGGACCACAGCCGCTTTGTCAACTGTGTGCGATTCTCTCCTGATGGGAACAGATTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506246.5
CDS CAA 72 bp GGTCCCTCAGGACGAGGGGCACACAGGGAATGCTGCTaGCATTTCAGCTCAGGCACAGCATCATGGAGTTCT +
Preference number: 6 (lower is better)
Translates to: GPSGRGAHRECC*HFSSGTASWSS
Trigger: AGAACTCCATGATGCTGTGCCTGAGCTGAAATGCAAGCAGCATTCCCTGTGTGCCCCTCGTCCTGAGGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509695.1
CDS CAA 90 bp GACTGGCGATTGCCTTATAAACCAGGACGGACGTTGAAACCTGCTTaGTCTCTCCTCCCTTCCAGACCGGGCTGCCTTCCCTCTTTGCCT +
Preference number: 6 (lower is better)
Translates to: DWRLPYKPGRTLKPA*SLLPSRPGCLPSLP
Trigger: AGGCAAAGAGGGAAGGCAGCCCGGTCTGGAAGGGAGGAGAGACAAAGCAGGTTTCAACGTCCGTCCTGGTTTATAAGGCAATCGCCAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515743.5
CDS TCA 72 bp CCACAACTTCGGGCTCGTAGCCGGGGTTGTCGATGCTaGAGCACTTCCTCTGATCCTTCAGCAGGACAATCT +
Preference number: 6 (lower is better)
Translates to: PQLRARSRGCRC*STSSDPSAGQS
Trigger: AGATTGTCCTGCTGAAGGATCAGAGGAAGTGCTTCAGCATCGACAACCCCGGCTACGAGCCCGAAGTTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
ENST00000502962.5
ENST00000515743.5
CDS GCA 72 bp TGTGAACTTGAACTTGAATGGGGGTCCCTCAAAGAATaGCGCGCAGTTATCATCGCTTCCCGTGGCCAGCCG +
Preference number: 6 (lower is better)
Translates to: CELELEWGSLKE*RAVIIASRGQP
Trigger: CGGCTGGCCACGGGAAGCGATGATAACTGCGCGGCATTCTTTGAGGGACCCCCATTCAAGTTCAAGTTCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264785.11
ENST00000382452.6
ENST00000499869.7
ENST00000505851.5
ENST00000508079.1
CDS CCA 72 bp CATGTCCATGCCACCGGAGGCAAAGTGTTCATTGTCTaGGGACCAGGCCAGGCAGACGATTTTTGCATGGTG +
Preference number: 6 (lower is better)
Translates to: HVHATGGKVFIV*GPGQADDFCMV
Trigger: CACCATGCAAAAATCGTCTGCCTGGCCTGGTCCCCAGACAATGAACACTTTGCCTCCGGTGGCATGGACATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
ENST00000502962.5
ENST00000515743.5
CDS CCA 72 bp CCTGCTCTGCAGTGCCTCCACCCTAGCGAAGAAACATaGCCTGAAGCCACAGCCTTCAATACAGCTCCCAAA +
Preference number: 6 (lower is better)
Translates to: PALQCLHPSEET*PEATAFNTAPK
Trigger: TTTGGGAGCTGTATTGAAGGCTGTGGCTTCAGGCCATGTTTCTTCGCTAGGGTGGAGGCACTGCAGAGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505543.5
CDS CCA 72 bp TCCAATTTACAGGTAGGCTGTGATGACCCTGGGTCCTaGGGCTTGGGTCTCAAGGCTTGCCACTGGTATCTC +
Preference number: 6 (lower is better)
Translates to: SNLQVGCDDPGS*GLGLKACHWYL
Trigger: GAGATACCAGTGGCAAGCCTTGAGACCCAAGCCCCAGGACCCAGGGTCATCACAGCCTACCTGTAAATTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514319.5
CDS CAA 72 bp GCAAATCTGTTCCCATCAGGAGAGAATCGCACACAGTaGACAAAGCGGCTGTGGTCCCTGCTCTGCAGTGCC +
Preference number: 6 (lower is better)
Translates to: ANLFPSGENRTQ*TKRLWSLLCSA
Trigger: GGCACTGCAGAGCAGGGACCACAGCCGCTTTGTCAACTGTGTGCGATTCTCTCCTGATGGGAACAGATTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505543.5
CDS CAA 72 bp CCACCTCCTATCTGTGTCAACATGGCCCACGGTCCCTaGTCCATGTCAGTCCATAGGGTCCACATTCCCTGT +
Preference number: 6 (lower is better)
Translates to: PPPICVNMAHGP*SMSVHRVHIPC
Trigger: ACAGGGAATGTGGACCCTATGGACTGACATGGACAAGGGACCGTGGGCCATGTTGACACAGATAGGAGGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515743.5
CDS CAA 72 bp TTGCCTTATAAACCAGGACGGACGTTGAAACCTGCTTaGTCTCTCCTCCCTTCCAGACCGGGCTGCCTTCCC +
Preference number: 6 (lower is better)
Translates to: LPYKPGRTLKPA*SLLPSRPGCLP
Trigger: GGGAAGGCAGCCCGGTCTGGAAGGGAGGAGAGACAAAGCAGGTTTCAACGTCCGTCCTGGTTTATAAGGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515743.5
CDS CAA 90 bp CGGTATGGCCGGCTCTGCTTGATGTCCACGCTGTTGATGACTTTGTaGTGTCCTGTAATCTCGCCCACAGAAGAGCCACTATCCCAGAGG +
Preference number: 6 (lower is better)
Translates to: RYGRLCLMSTLLMTL*CPVISPTEEPLSQR
Trigger: CCTCTGGGATAGTGGCTCTTCTGTGGGCGAGATTACAGGACACAACAAAGTCATCAACAGCGTGGACATCAAGCAGAGCCGGCCATACCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264785.11
ENST00000382452.6
ENST00000499869.7
ENST00000505851.5
ENST00000508079.1
CDS CAA 90 bp AGCCGGTATGGCCGGCTCTGCTTGATGTCCACGCTGTTGATGACTTaGTTGTGTCCTGTAATCTCGCCCACAGAAGAGCCACTATCCCAG +
Preference number: 6 (lower is better)
Translates to: SRYGRLCLMSTLLMT*LCPVISPTEEPLSQ
Trigger: CTGGGATAGTGGCTCTTCTGTGGGCGAGATTACAGGACACAACAAAGTCATCAACAGCGTGGACATCAAGCAGAGCCGGCCATACCGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264785.11
ENST00000382452.6
ENST00000499869.7
ENST00000505851.5
ENST00000508079.1
CDS CAA 90 bp ACTCAACTATCTGCACGAGAACCCGATGCTGAGGTCACTTCATGTTaGGTGGCCTGTGACCTCACAGTGAAGACACAGACCCCGACCTCC +
Preference number: 6 (lower is better)
Translates to: TQLSAREPDAEVTSC*VACDLTVKTQTPTS
Trigger: GGAGGTCGGGGTCTGTGTCTTCACTGTGAGGTCACAGGCCACCAAACATGAAGTGACCTCAGCATCGGGTTCTCGTGCAGATAGTTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515743.5
CDS TCA 72 bp CAAATCTGTTCCCATCAGGAGAGAATCGCACACAGTTaGCAAAGCGGCTGTGGTCCACCGAGGAAACCGAGG +
Preference number: 6 (lower is better)
Translates to: QICSHQERIAHS*QSGCGPPRKPR
Trigger: CCTCGGTTTCCTCGGTGGACCACAGCCGCTTTGTCAACTGTGTGCGATTCTCTCCTGATGGGAACAGATTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502962.5
CDS TCA 72 bp CTGGGTTTTTCCTATGTCCTCCCAGTCTCAGGTGGGTaGCGGAGGGGCCAGAGGTCACTACTCCAATTTACA +
Preference number: 6 (lower is better)
Translates to: LGFSYVLPVSGG*RRGQRSLLQFT
Trigger: TGTAAATTGGAGTAGTGACCTCTGGCCCCTCCGTCACCCACCTGAGACTGGGAGGACATAGGAAAAACCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514319.5
CDS TCA 72 bp GACCATGACATAACCACAGCTCGAATCCTAGACCTCTaGCCAGCACATCGAGTTCTCTCGCTGCCGAACTCC +
Preference number: 6 (lower is better)
Translates to: DHDITTARILDL*PAHRVLSLPNS
Trigger: GGAGTTCGGCAGCGAGAGAACTCGATGTGCTGGTCAGAGGTCTAGGATTCGAGCTGTGGTTATGTCATGGTC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515743.5
CDS GCA 72 bp TGTGTCCGTCGTGGCTCCCAGAGTAAATGTAGGACTTaGCGCCGTTTTTATGCACCGTCAGACACTGGATCG +
Preference number: 6 (lower is better)
Translates to: CVRRGSQSKCRT*RRFYAPSDTGS
Trigger: CGATCCAGTGTCTGACGGTGCATAAAAACGGCGGCAAGTCCTACATTTACTCTGGGAGCCACGACGGACACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
ENST00000502962.5
ENST00000504739.5
ENST00000506246.5
ENST00000515743.5
CDS GCA 72 bp GGTCACTCAGGGTCCAAACATACACCATCATGTCCATaGCACCGGAGGCAAAGTGTTCATTGTCTGGGGACC +
Preference number: 6 (lower is better)
Translates to: GHSGSKHTPSCP*HRRQSVHCLGT
Trigger: GGTCCCCAGACAATGAACACTTTGCCTCCGGTGGCATGGACATGATGGTGTATGTTTGGACCCTGAGTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
ENST00000502962.5
ENST00000515743.5
CDS CCA 72 bp TTGGGTCTCAAGGCTTGCCACTGGTATCTCAGCTCCTaGCCCACAGTGAACCTGATGGAACATGCTAGAAGG +
Preference number: 6 (lower is better)
Translates to: LGLKACHWYLSS*PTVNLMEHARR
Trigger: CCTTCTAGCATGTTCCATCAGGTTCACTGTGGGCCAGGAGCTGAGATACCAGTGGCAAGCCTTGAGACCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514319.5
CDS CCA 72 bp CCGAATCACCCAAGCCCAGATGAGTGGGTGGGACAGTaGACGCTGATGGCTCTTGCTACAAAATGGAGGAAA +
Preference number: 6 (lower is better)
Translates to: PNHPSPDEWVGQ*TLMALATKWRK
Trigger: TTTCCTCCATTTTGTAGCAAGAGCCATCAGCGTCCACTGTCCCACCCACTCATCTGGGCTTGGGTGATTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515743.5
CDS CAA 72 bp GGCCGGCTCTGCTTGATGTCCACGCTGTTGATGACTTaGTTGTGTCCTGTAATCTCGCCCACAGAAGAGCCA +
Preference number: 6 (lower is better)
Translates to: GRLCLMSTLLMT*LCPVISPTEEP
Trigger: TGGCTCTTCTGTGGGCGAGATTACAGGACACAACAAAGTCATCAACAGCGTGGACATCAAGCAGAGCCGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264785.11
ENST00000382452.6
ENST00000499869.7
ENST00000505851.5
ENST00000508079.1
CDS CAA 72 bp ACCATCATGTCCATGCCACCGGAGGCAAAGTGTTCATaGTCTGGGGACCAGGCCAGGCAGACGATTTTTGCA +
Preference number: 6 (lower is better)
Translates to: TIMSMPPEAKCS*SGDQARQTIFA
Trigger: TGCAAAAATCGTCTGCCTGGCCTGGTCCCCAGACAATGAACACTTTGCCTCCGGTGGCATGGACATGATGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
ENST00000502962.5
ENST00000515743.5
CDS CAA 72 bp GCAAATCTGTTCCCATCAGGAGAGAATCGCACACAGTaGACAAAGCGGCTGTGGTCCACCGAGGAAACCGAG +
Preference number: 6 (lower is better)
Translates to: ANLFPSGENRTQ*TKRLWSTEETE
Trigger: CTCGGTTTCCTCGGTGGACCACAGCCGCTTTGTCAACTGTGTGCGATTCTCTCCTGATGGGAACAGATTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502962.5
CDS CAA 90 bp TTCTCACTACCAGACTGGCGATTGCCTTATAAACCAGGACGGACGTaGAAACCTGCTTTGTCTCTCCTCCCTTCCAGACCGGGCTGCCTT +
Preference number: 6 (lower is better)
Translates to: FSLPDWRLPYKPGRT*KPALSLLPSRPGCL
Trigger: AAGGCAGCCCGGTCTGGAAGGGAGGAGAGACAAAGCAGGTTTCAACGTCCGTCCTGGTTTATAAGGCAATCGCCAGTCTGGTAGTGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515743.5
CDS CAA 90 bp TGTGACAGTCACACCGTGGGTGAACAGATTCGATTCCCCATAATCTaGCCTCCACCCAACCGAGATGCCAATAGTGAGACGGTGCCTGTG +
Preference number: 6 (lower is better)
Translates to: CDSHTVGEQIRFPII*PPPNRDANSETVPV
Trigger: CACAGGCACCGTCTCACTATTGGCATCTCGGTTGGGTGGAGGCAAGATTATGGGGAATCGAATCTGTTCACCCACGGTGTGACTGTCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515743.5
CDS TCA 72 bp CAAATCTGTTCCCATCAGGAGAGAATCGCACACAGTTaGCAAAGCGGCTGTGGTCCTGTATCAACGAGCCCC +
Preference number: 6 (lower is better)
Translates to: QICSHQERIAHS*QSGCGPVSTSP
Trigger: GGGGCTCGTTGATACAGGACCACAGCCGCTTTGTCAACTGTGTGCGATTCTCTCCTGATGGGAACAGATTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504739.5
CDS GCA 72 bp TTCCCAGCGAAAGGCTGGTACTCATACTTCAACAGGTaGTCCTTCTGCGTGGTATCCCAGATCCTCAGCTTC +
Preference number: 6 (lower is better)
Translates to: FPAKGWYSYFNR*SFCVVSQILSF
Trigger: GAAGCTGAGGATCTGGGATACCACGCAGAAGGAGCACCTGTTGAAGTATGAGTACCAGCCTTTCGCTGGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264785.11
ENST00000382452.6
ENST00000499869.7
ENST00000505851.5
ENST00000508079.1
ENST00000514319.5
ENST00000515018.1
CDS CCA 72 bp GCTGGTACTCATACTTCAACAGGTGCTCCTTCTGCGTaGTATCCCAGATCCTCAGCTTCCCAGACACATCTC +
Preference number: 6 (lower is better)
Translates to: AGTHTSTGAPSA*YPRSSASQTHL
Trigger: GAGATGTGTCTGGGAAGCTGAGGATCTGGGATACCACGCAGAAGGAGCACCTGTTGAAGTATGAGTACCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264785.11
ENST00000382452.6
ENST00000499869.7
ENST00000505851.5
ENST00000508079.1
ENST00000514319.5
ENST00000515018.1
CDS CCA 72 bp GCGGCTGTGGTCGCCAATTGTGAACTTGAACTTGAATaGGGGTCCCTCAAAGAATGCCGCGCAGTTATCATC +
Preference number: 6 (lower is better)
Translates to: AAVVANCELELE*GSLKECRAVII
Trigger: GATGATAACTGCGCGGCATTCTTTGAGGGACCCCCATTCAAGTTCAAGTTCACAATTGGCGACCACAGCCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382452.6
ENST00000499869.7
ENST00000508079.1
CDS CCA 72 bp AAGTGCCCATTTCAGTGGCTCCCTGAGGTCAAAACATaGACATTCCTACTCCAGTTCCAGGTCCCAGAAGCG +
Preference number: 6 (lower is better)
Translates to: KCPFQWLPEVKT*TFLLQFQVPEA
Trigger: CGCTTCTGGGACCTGGAACTGGAGTAGGAATGTCCATGTTTTGACCTCAGGGAGCCACTGAAATGGGCACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515743.5
CDS CAA 72 bp CAGTTGACAAAGCGGCTGTGGTCGCCAATTGTGAACTaGAACTTGAATGGGGGTCCCTCAAAGAATGCCGCG +
Preference number: 6 (lower is better)
Translates to: QLTKRLWSPIVN*NLNGGPSKNAA
Trigger: CGCGGCATTCTTTGAGGGACCCCCATTCAAGTTCAAGTTCACAATTGGCGACCACAGCCGCTTTGTCAACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382452.6
ENST00000499869.7
ENST00000508079.1
CDS CAA 72 bp GCAAATCTGTTCCCATCAGGAGAGAATCGCACACAGTaGACAAAGCGGCTGTGGTCCTGTATCAACGAGCCC +
Preference number: 6 (lower is better)
Translates to: ANLFPSGENRTQ*TKRLWSCINEP
Trigger: GGGCTCGTTGATACAGGACCACAGCCGCTTTGTCAACTGTGTGCGATTCTCTCCTGATGGGAACAGATTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504739.5
CDS CAA 72 bp GCAAATCTGTTCCCATCAGGAGAGAATCGCACACAGTaGACAAAGCGGCTGTGGTCCTGCACGAATCTGGTC +
Preference number: 6 (lower is better)
Translates to: ANLFPSGENRTQ*TKRLWSCTNLV
Trigger: GACCAGATTCGTGCAGGACCACAGCCGCTTTGTCAACTGTGTGCGATTCTCTCCTGATGGGAACAGATTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515743.5
CDS CAA 72 bp CACACCGTGGGTGAACAGATTCGATTCCCCATAATCTaGCCTCCACCCAACCGAGATGCCAATAGTGAGACG +
Preference number: 6 (lower is better)
Translates to: HTVGEQIRFPII*PPPNRDANSET
Trigger: CGTCTCACTATTGGCATCTCGGTTGGGTGGAGGCAAGATTATGGGGAATCGAATCTGTTCACCCACGGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515743.5
CDS CAA 90 bp ATGTTCCTTAGGATGACGCACTTTCCATTGGTGTACAGAAAATTGTaGCCCTTAGGGTCGCCGCCGATGATCTTGGAGACGCCCCTCTCC +
Preference number: 6 (lower is better)
Translates to: MFLRMTHFPLVYRKL*PLGSPPMILETPLS
Trigger: GGAGAGGGGCGTCTCCAAGATCATCGGCGGCGACCCTAAGGGCAACAATTTTCTGTACACCAATGGAAAGTGCGTCATCCTAAGGAACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
ENST00000505851.5
ENST00000508079.1
ENST00000509600.1
ENST00000514319.5
CDS CAA 90 bp TCGATGTTCCTTAGGATGACGCACTTTCCATTGGTGTACAGAAAATaGTTGCCCTTAGGGTCGCCGCCGATGATCTTGGAGACGCCCCTC +
Preference number: 6 (lower is better)
Translates to: SMFLRMTHFPLVYRK*LPLGSPPMILETPL
Trigger: GAGGGGCGTCTCCAAGATCATCGGCGGCGACCCTAAGGGCAACAATTTTCTGTACACCAATGGAAAGTGCGTCATCCTAAGGAACATCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
ENST00000505851.5
ENST00000508079.1
ENST00000509600.1
ENST00000514319.5
CDS CAA 90 bp GCAAGGGCTGGGTTGTCGATGTTCCTTAGGATGACGCACTTTCCATaGGTGTACAGAAAATTGTTGCCCTTAGGGTCGCCGCCGATGATC +
Preference number: 6 (lower is better)
Translates to: ARAGLSMFLRMTHFP*VYRKLLPLGSPPMI
Trigger: GATCATCGGCGGCGACCCTAAGGGCAACAATTTTCTGTACACCAATGGAAAGTGCGTCATCCTAAGGAACATCGACAACCCAGCCCTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382452.6
ENST00000499869.7
ENST00000505851.5
ENST00000508079.1
CDS CAA 90 bp CAAACATACACCATCATGTCCATGCCACCGGAGGCAAAGTGTTCATaGTCTGGGGACCAGGCCAGGCAGACGATTTTTGCATGGTGTCCA +
Preference number: 6 (lower is better)
Translates to: QTYTIMSMPPEAKCS*SGDQARQTIFAWCP
Trigger: TGGACACCATGCAAAAATCGTCTGCCTGGCCTGGTCCCCAGACAATGAACACTTTGCCTCCGGTGGCATGGACATGATGGTGTATGTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
ENST00000502962.5
ENST00000515743.5
CDS CAA 90 bp AAGCGGCTGTGGTCGTCGATGTTCCTTAGGATGACGCACTTTCCATaGGTGTACAGAAAATTGTTGCCCTTAGGGTCGCCGCCGATGATC +
Preference number: 6 (lower is better)
Translates to: KRLWSSMFLRMTHFP*VYRKLLPLGSPPMI
Trigger: GATCATCGGCGGCGACCCTAAGGGCAACAATTTTCTGTACACCAATGGAAAGTGCGTCATCCTAAGGAACATCGACGACCACAGCCGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382451.6
ENST00000502702.5
CDS CAA 90 bp CCGACCACGGCGATCCTCTTACTGTCTTCAGTCCAAGCAATGTCTTaGATCTTCCCAGCGAAAGGCTGGTACTCATACTTCAACAGGTGC +
Preference number: 6 (lower is better)
Translates to: PTTAILLLSSVQAMS*IFPAKGWYSYFNRC
Trigger: GCACCTGTTGAAGTATGAGTACCAGCCTTTCGCTGGGAAGATCAAAGACATTGCTTGGACTGAAGACAGTAAGAGGATCGCCGTGGTCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264785.11
ENST00000382452.6
ENST00000499869.7
ENST00000505851.5
ENST00000508079.1
ENST00000514319.5
ENST00000515018.1
CDS TCA 72 bp ACAAAGCGGCTGTGGTCCACCGAGGAAACCGAGGCTTaGAGCACTGAGGTCATAATTAAGTACCACACCCAT +
Preference number: 6 (lower is better)
Translates to: TKRLWSTEETEA*STEVIIKYHTH
Trigger: ATGGGTGTGGTACTTAATTATGACCTCAGTGCTTCAAGCCTCGGTTTCCTCGGTGGACCACAGCCGCTTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502962.5
CDS TCA 72 bp CAAATCTGTTCCCATCAGGAGAGAATCGCACACAGTTaGCAAAGCGGCTGTGGTCCGCGTCTTCAATGTCAC +
Preference number: 6 (lower is better)
Translates to: QICSHQERIAHS*QSGCGPRLQCH
Trigger: GTGACATTGAAGACGCGGACCACAGCCGCTTTGTCAACTGTGTGCGATTCTCTCCTGATGGGAACAGATTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509695.1
CDS TCA 72 bp CAAATCTGTTCCCATCAGGAGAGAATCGCACACAGTTaGCAAAGCGGCTGTGGTCCTGCACGAATCTGGTCT +
Preference number: 6 (lower is better)
Translates to: QICSHQERIAHS*QSGCGPARIWS
Trigger: AGACCAGATTCGTGCAGGACCACAGCCGCTTTGTCAACTGTGTGCGATTCTCTCCTGATGGGAACAGATTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515743.5
CDS GCA 72 bp AAAGGCTGGTACTCATACTTCAACAGGTGCTCCTTCTaGGTGGTATCCCAGATCCTCAGCTTCCCAGACACA +
Preference number: 6 (lower is better)
Translates to: KGWYSYFNRCSF*VVSQILSFPDT
Trigger: TGTGTCTGGGAAGCTGAGGATCTGGGATACCACGCAGAAGGAGCACCTGTTGAAGTATGAGTACCAGCCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264785.11
ENST00000382452.6
ENST00000499869.7
ENST00000505851.5
ENST00000508079.1
ENST00000514319.5
ENST00000515018.1
CDS GCA 72 bp ACTCTGTCCACATCACCAGGCTGGCTCTTTTCCAGATaGAGAACTCAACTATCTGCACGAGAACCCGATGCT +
Preference number: 6 (lower is better)
Translates to: TLSTSPGWLFSR*RTQLSAREPDA
Trigger: AGCATCGGGTTCTCGTGCAGATAGTTGAGTTCTGCATCTGGAAAAGAGCCAGCCTGGTGATGTGGACAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515743.5
CDS CCA 72 bp CGTCATAGATGTATATCTGGCCGTCAGCACTGGCTGTaGCAAATCTGTTCCCATCAGGAGAGAATCGCACAC +
Preference number: 6 (lower is better)
Translates to: RHRCISGRQHWL*QICSHQERIAH
Trigger: GTGTGCGATTCTCTCCTGATGGGAACAGATTTGCCACAGCCAGTGCTGACGGCCAGATATACATCTATGACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
ENST00000502962.5
ENST00000504739.5
ENST00000505543.5
ENST00000506246.5
ENST00000508079.1
ENST00000508949.5
ENST00000509695.1
ENST00000510848.5
ENST00000515743.5
CDS CAA 72 bp CGGCTCTGCTTGATGTCCACGCTGTTGATGACTTTGTaGTGTCCTGTAATCTCGCCCACAGAAGAGCCACTA +
Preference number: 6 (lower is better)
Translates to: RLCLMSTLLMTL*CPVISPTEEPL
Trigger: TAGTGGCTCTTCTGTGGGCGAGATTACAGGACACAACAAAGTCATCAACAGCGTGGACATCAAGCAGAGCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264785.11
ENST00000382452.6
ENST00000499869.7
ENST00000505851.5
ENST00000508079.1
CDS CAA 72 bp AGGATGACGCACTTTCCATTGGTGTACAGAAAATTGTaGCCCTTAGGGTCGCCGCCGATGATCTTGGAGACG +
Preference number: 6 (lower is better)
Translates to: RMTHFPLVYRKL*PLGSPPMILET
Trigger: CGTCTCCAAGATCATCGGCGGCGACCCTAAGGGCAACAATTTTCTGTACACCAATGGAAAGTGCGTCATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
ENST00000505851.5
ENST00000508079.1
ENST00000509600.1
ENST00000514319.5
CDS CAA 72 bp ACAAAGCGGCTGTGGTCGCCAATTGTGAACTTGAACTaGAATGGGGGTCCCTCAAAGAATGCCGCGCAGTTA +
Preference number: 6 (lower is better)
Translates to: TKRLWSPIVNLN*NGGPSKNAAQL
Trigger: TAACTGCGCGGCATTCTTTGAGGGACCCCCATTCAAGTTCAAGTTCACAATTGGCGACCACAGCCGCTTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382452.6
ENST00000499869.7
ENST00000508079.1
CDS CAA 72 bp GCAAATCTGTTCCCATCAGGAGAGAATCGCACACAGTaGACAAAGCGGCTGTGGTCGTCGATGTTCCTTAGG +
Preference number: 6 (lower is better)
Translates to: ANLFPSGENRTQ*TKRLWSSMFLR
Trigger: CCTAAGGAACATCGACGACCACAGCCGCTTTGTCAACTGTGTGCGATTCTCTCCTGATGGGAACAGATTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382451.6
ENST00000502702.5
CDS CAA 72 bp GCAAATCTGTTCCCATCAGGAGAGAATCGCACACAGTaGACAAAGCGGCTGTGGTCCGCGTCTTCAATGTCA +
Preference number: 6 (lower is better)
Translates to: ANLFPSGENRTQ*TKRLWSASSMS
Trigger: TGACATTGAAGACGCGGACCACAGCCGCTTTGTCAACTGTGTGCGATTCTCTCCTGATGGGAACAGATTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509695.1
CDS TCA 72 bp CAAATCTGTTCCCATCAGGAGAGAATCGCACACAGTTaGCAAAGCGGCTGTGGTCGTCGATGTTCCTTAGGA +
Preference number: 6 (lower is better)
Translates to: QICSHQERIAHS*QSGCGRRCSLG
Trigger: TCCTAAGGAACATCGACGACCACAGCCGCTTTGTCAACTGTGTGCGATTCTCTCCTGATGGGAACAGATTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382451.6
ENST00000502702.5
CDS TCA 72 bp TCCAACCTGTCACAAGTGCCCATTTCAGTGGCTCCCTaGGGTCAAAACATGGACATTCCTACTCCAGTTCCA +
Preference number: 6 (lower is better)
Translates to: SNLSQVPISVAP*GQNMDIPTPVP
Trigger: TGGAACTGGAGTAGGAATGTCCATGTTTTGACCTCAGGGAGCCACTGAAATGGGCACTTGTGACAGGTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515743.5
CDS TCA 72 bp ACACTGTATCCATGCCCTATTAAAATGGGGCAGGCATaGCAACCAGTAAGAGGCTGGAACACACAGGACTGG +
Preference number: 6 (lower is better)
Translates to: TLYPCPIKMGQA*QPVRGWNTQDW
Trigger: CCAGTCCTGTGTGTTCCAGCCTCTTACTGGTTGTCATGCCTGCCCCATTTTAATAGGGCATGGATACAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515743.5
CDS CCA 72 bp GTCCAAGCAATGTCTTTGATCTTCCCAGCGAAAGGCTaGTACTCATACTTCAACAGGTGCTCCTTCTGCGTG +
Preference number: 6 (lower is better)
Translates to: VQAMSLIFPAKG*YSYFNRCSFCV
Trigger: CACGCAGAAGGAGCACCTGTTGAAGTATGAGTACCAGCCTTTCGCTGGGAAGATCAAAGACATTGCTTGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264785.11
ENST00000382452.6
ENST00000499869.7
ENST00000505851.5
ENST00000508079.1
ENST00000514319.5
ENST00000515018.1
CDS CCA 72 bp ATCTTGGAAGTTTTGTCCCCAGAAGCAGAAAGCAAATaGGTGCTGTCGGGACTCCAATGCGTAAATCCCACC +
Preference number: 6 (lower is better)
Translates to: ILEVLSPEAESK*VLSGLQCVNPT
Trigger: GGTGGGATTTACGCATTGGAGTCCCGACAGCACCCATTTGCTTTCTGCTTCTGGGGACAAAACTTCCAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000509695.1
ENST00000515743.5
CDS CAA 72 bp CTTAGGATGACGCACTTTCCATTGGTGTACAGAAAATaGTTGCCCTTAGGGTCGCCGCCGATGATCTTGGAG +
Preference number: 6 (lower is better)
Translates to: LRMTHFPLVYRK*LPLGSPPMILE
Trigger: CTCCAAGATCATCGGCGGCGACCCTAAGGGCAACAATTTTCTGTACACCAATGGAAAGTGCGTCATCCTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000382451.6
ENST00000382452.6
ENST00000499869.7
ENST00000502702.5
ENST00000505851.5
ENST00000508079.1
ENST00000509600.1
ENST00000514319.5
CDS CAA 72 bp GGGTTGTCGATGTTCCTTAGGATGACGCACTTTCCATaGGTGTACAGAAAATTGTTGCCCTTAGGGTCGCCG +
Preference number: 6 (lower is better)
Translates to: GLSMFLRMTHFP*VYRKLLPLGSP
Trigger: CGGCGACCCTAAGGGCAACAATTTTCTGTACACCAATGGAAAGTGCGTCATCCTAAGGAACATCGACAACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382452.6
ENST00000499869.7
ENST00000505851.5
ENST00000508079.1
CDS CAA 72 bp GCAAATCTGTTCCCATCAGGAGAGAATCGCACACAGTaGACAAAGCGGCTGTGGTCGCCAATTGTGAACTTG +
Preference number: 6 (lower is better)
Translates to: ANLFPSGENRTQ*TKRLWSPIVNL
Trigger: CAAGTTCACAATTGGCGACCACAGCCGCTTTGTCAACTGTGTGCGATTCTCTCCTGATGGGAACAGATTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382452.6
ENST00000499869.7
ENST00000508079.1
CDS CAA 72 bp TGGTCGTCGATGTTCCTTAGGATGACGCACTTTCCATaGGTGTACAGAAAATTGTTGCCCTTAGGGTCGCCG +
Preference number: 6 (lower is better)
Translates to: WSSMFLRMTHFP*VYRKLLPLGSP
Trigger: CGGCGACCCTAAGGGCAACAATTTTCTGTACACCAATGGAAAGTGCGTCATCCTAAGGAACATCGACGACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382451.6
ENST00000502702.5
CDS CAA 72 bp CTCACGTCGATGTTCCTTAGGATGACGCACTTTCCATaGGTGTACAGAAAATTGTTGCCCTTAGGGTCGCCG +
Preference number: 6 (lower is better)
Translates to: LTSMFLRMTHFP*VYRKLLPLGSP
Trigger: CGGCGACCCTAAGGGCAACAATTTTCTGTACACCAATGGAAAGTGCGTCATCCTAAGGAACATCGACGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509600.1
CDS CAA 90 bp AAGGTTGGAGATACGTCGATGTTCCTTAGGATGACGCACTTTCCATaGGTGTACAGAAAATTGTTGCCCTTAGGGTCGCCGCCGATGATC +
Preference number: 6 (lower is better)
Translates to: KVGDTSMFLRMTHFP*VYRKLLPLGSPPMI
Trigger: GATCATCGGCGGCGACCCTAAGGGCAACAATTTTCTGTACACCAATGGAAAGTGCGTCATCCTAAGGAACATCGACGTATCTCCAACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514319.5
CDS GCA 72 bp CTAATCAGCCACTGTTCAATTCCAACCTGTCACAAGTaGCCATTTCAGTGGCTCCCTGAGGTCAAAACATGG +
Preference number: 6 (lower is better)
Translates to: LISHCSIPTCHK*PFQWLPEVKTW
Trigger: CCATGTTTTGACCTCAGGGAGCCACTGAAATGGGCACTTGTGACAGGTTGGAATTGAACAGTGGCTGATTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515743.5
CDS CAA 72 bp GATACGTCGATGTTCCTTAGGATGACGCACTTTCCATaGGTGTACAGAAAATTGTTGCCCTTAGGGTCGCCG +
Preference number: 6 (lower is better)
Translates to: DTSMFLRMTHFP*VYRKLLPLGSP
Trigger: CGGCGACCCTAAGGGCAACAATTTTCTGTACACCAATGGAAAGTGCGTCATCCTAAGGAACATCGACGTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514319.5
CDS CAA 72 bp GCGATCCTCTTACTGTCTTCAGTCCAAGCAATGTCTTaGATCTTCCCAGCGAAAGGCTGGTACTCATACTTC +
Preference number: 6 (lower is better)
Translates to: AILLLSSVQAMS*IFPAKGWYSYF
Trigger: GAAGTATGAGTACCAGCCTTTCGCTGGGAAGATCAAAGACATTGCTTGGACTGAAGACAGTAAGAGGATCGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264785.11
ENST00000382452.6
ENST00000499869.7
ENST00000505851.5
ENST00000508079.1
ENST00000514319.5
ENST00000515018.1
CDS TCA 72 bp CGATCCTCTTACTGTCTTCAGTCCAAGCAATGTCTTTaGTCTTCCCAGCGAAAGGCTGGTACTCATACTTCA +
Preference number: 6 (lower is better)
Translates to: RSSYCLQSKQCL*SSQRKAGTHTS
Trigger: TGAAGTATGAGTACCAGCCTTTCGCTGGGAAGATCAAAGACATTGCTTGGACTGAAGACAGTAAGAGGATCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264785.11
ENST00000382452.6
ENST00000499869.7
ENST00000505851.5
ENST00000508079.1
ENST00000514319.5
ENST00000515018.1
CDS TCA 72 bp GCTAGAAGGTTGGAGATACGTCGATGTTCCTTAGGATaGCGCACTTTCCATTGGTGTACAGAAAATTGTTGC +
Preference number: 6 (lower is better)
Translates to: ARRLEIRRCSLG*RTFHWCTENCC
Trigger: GCAACAATTTTCTGTACACCAATGGAAAGTGCGTCATCCTAAGGAACATCGACGTATCTCCAACCTTCTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514319.5