RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for WDPCP (Homo sapiens)

Ensembl gene IDs: ENSG00000143951

Ensembl transcript IDs: ENST00000272321.12, ENST00000398544.7, ENST00000409120.5, ENST00000409199.5, ENST00000409354.6, ENST00000409562.7, ENST00000409835.5, ENST00000417238.5, ENST00000418148.5, ENST00000431065.1, ENST00000462652.1, ENST00000467687.1, ENST00000473678.1, ENST00000484073.1, ENST00000490935.5, ENST00000493315.1

Found 599 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ATGAGCTTCCCCACCAGGCTTCTGTCAATCACCACTTTCTCCAGCTaGGGCCCAGAAAGGCTTAGAGACACCAGCACACCTGAACCAAAA +
Preference number: 1 (lower is better)
Translates to: MSFPTRLLSITTFSS*GPERLRDTSTPEPK
Trigger: TTTTGGTTCAGGTGTGCTGGTGTCTCTAAGCCTTTCTGGGCCGCAGCTGGAGAAAGTGGTGATTGACAGAAGCCTGGTGGGGAAGCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417238.5
3UTR TCA 90 bp TGTCAGCCATGGGCTCTTTGTCTACACTTACGGAGTGCTCCACTGTaGACACCTGATAAGGCTGTTTGGTGCCAAAGCGAACATCCAGTG +
Preference number: 1 (lower is better)
Translates to: CQPWALCLHLRSAPL*TPDKAVWCQSEHPV
Trigger: CACTGGATGTTCGCTTTGGCACCAAACAGCCTTATCAGGTGTTCACAGTGGAGCACTCCGTAAGTGTAGACAAAGAGCCCATGGCTGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417238.5
3UTR CCA 90 bp CTAAGAAGATGGTTTACAATGGCGCTCATGCTGATAAAGCACTGGTaGCCCAGAGTGTCCCAGTTCATGCTGCTCAGGATGTTTATTGCC +
Preference number: 1 (lower is better)
Translates to: LRRWFTMALMLIKHW*PRVSQFMLLRMFIA
Trigger: GGCAATAAACATCCTGAGCAGCATGAACTGGGACACTCTGGGCCACCAGTGCTTTATCAGCATGAGCGCCATTGTAAACCATCTTCTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417238.5
3UTR CCA 90 bp TCAAGCTGTGCTTCTCTCTCTGGAGTGAGCTTCTGTCTAAGAAGATaGTTTACAATGGCGCTCATGCTGATAAAGCACTGGTGGCCCAGA +
Preference number: 1 (lower is better)
Translates to: SSCASLSGVSFCLRR*FTMALMLIKHWWPR
Trigger: TCTGGGCCACCAGTGCTTTATCAGCATGAGCGCCATTGTAAACCATCTTCTTAGACAGAAGCTCACTCCAGAGAGAGAAGCACAGCTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417238.5
3UTR GCA 90 bp CCTGTGAACCTGTCAGTGCTAGGACAGATACTACCTAGCTGTTCCTaGCTATACCACTCTTCTTACTTTAGAGCTATGGTAGCCCCTTCA +
Preference number: 1 (lower is better)
Translates to: PVNLSVLGQILPSCS*LYHSSYFRAMVAPS
Trigger: TGAAGGGGCTACCATAGCTCTAAAGTAAGAAGAGTGGTATAGGCAGGAACAGCTAGGTAGTATCTGTCCTAGCACTGACAGGTTCACAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272321.12
3UTR CCA 90 bp AACTCCCCTTGGTTGCTGCCAACTAGCAGAATGGCACCACTTGGGTaGCAGCTTATTAATGAAGGCAAAAGTTCAGTCTGTGCTAAGAGA +
Preference number: 1 (lower is better)
Translates to: NSPWLLPTSRMAPLG*QLINEGKSSVCAKR
Trigger: TCTCTTAGCACAGACTGAACTTTTGCCTTCATTAATAAGCTGCCACCCAAGTGGTGCCATTCTGCTAGTTGGCAGCAACCAAGGGGAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417238.5
3UTR GCA 90 bp CACCTGAACCAAAAAGGAGCTGACAGACATATTTGTTCTTCCATTTaGTCAGCACACACCGACTGTTTTGCATCAGCTCCTCCAACTCTT +
Preference number: 1 (lower is better)
Translates to: HLNQKGADRHICSSI*SAHTDCFASAPPTL
Trigger: AAGAGTTGGAGGAGCTGATGCAAAACAGTCGGTGTGTGCTGAGCAAATGGAAGAACAAATATGTCTGTCAGCTCCTTTTTGGTTCAGGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417238.5
3UTR CCA 90 bp CTGAATTGCAGAGTCTCCCTGGGTAAGCGGTCTTCAGCCAACAGTTaGATGTTAATAGGGGATAGAGCCATATCAAAAATTTGCAACTCC +
Preference number: 1 (lower is better)
Translates to: LNCRVSLGKRSSANS*MLIGDRAISKICNS
Trigger: GGAGTTGCAAATTTTTGATATGGCTCTATCCCCTATTAACATCCAACTGTTGGCTGAAGACCGCTTACCCAGGGAGACTCTGCAATTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417238.5
3UTR TCA 90 bp TCCATTGCATTTGAACAAGACTGCTGGAGGCATCAAATAATTTACTaGATTGCAGAGTCTCCCTGGGTAAGCGGTCTTCAGCCAACAGTT +
Preference number: 1 (lower is better)
Translates to: SIAFEQDCWRHQIIY*IAESPWVSGLQPTV
Trigger: AACTGTTGGCTGAAGACCGCTTACCCAGGGAGACTCTGCAATTCAGTAAATTATTTGATGCCTCCAGCAGTCTTGTTCAAATGCAATGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417238.5
3UTR TCA 90 bp CAAGCATCATCGTTGACCAGTGGCCACCAGCAAACAACTCTATCATaGACACAGTTGATAGCTAGATGTCGCTCTGTTGTCTTGTTTATT +
Preference number: 1 (lower is better)
Translates to: QASSLTSGHQQTTLS*TQLIARCRSVVLFI
Trigger: AATAAACAAGACAACAGAGCGACATCTAGCTATCAACTGTGTTCATGATAGAGTTGTTTGCTGGTGGCCACTGGTCAACGATGATGCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417238.5
3UTR TCA 90 bp ATTCCTCAGATCCAAGTTTCCATCTGGTATCATTTCCTTTCAGCCTaGAGAATTTCCTTTAGCATTTCTTGCAGTGAAGGTCTGCTGGCA +
Preference number: 1 (lower is better)
Translates to: IPQIQVSIWYHFLSA*RISFSISCSEGLLA
Trigger: TGCCAGCAGACCTTCACTGCAAGAAATGCTAAAGGAAATTCTTCAGGCTGAAAGGAAATGATACCAGATGGAAACTTGGATCTGAGGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417238.5
3UTR CCA 90 bp TTGATCTCTATATTCCAATATAGTGGAATCCAGAAGTGGTCTTGTTaGAGCATAGAAGGTTCCAAGGCTTGTCTCAAGCTGTGCTTCTCT +
Preference number: 1 (lower is better)
Translates to: LISIFQYSGIQKWSC*SIEGSKACLKLCFS
Trigger: AGAGAAGCACAGCTTGAGACAAGCCTTGGAACCTTCTATGCTCCAACAAGACCACTTCTGGATTCCACTATATTGGAATATAGAGATCAA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417238.5
3UTR GCA 90 bp CTACCCAGGTCCTCACTCACTGAGCAAGTGATGGAAGAATCTCCTTaGATATTTGCTGATTTGATCTCTATATTCCAATATAGTGGAATC +
Preference number: 1 (lower is better)
Translates to: LPRSSLTEQVMEESP*IFADLISIFQYSGI
Trigger: GATTCCACTATATTGGAATATAGAGATCAAATCAGCAAATATGCAAGGAGATTCTTCCATCACTTGCTCAGTGAGTGAGGACCTGGGTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417238.5
3UTR CCA 90 bp CAGCCTGAAGAATTTCCTTTAGCATTTCTTGCAGTGAAGGTCTGCTaGCAACAAAACCTCATTTTTGTTTATTCGGTGATACTCCCTCTT +
Preference number: 1 (lower is better)
Translates to: QPEEFPLAFLAVKVC*QQNLIFVYSVILPL
Trigger: AAGAGGGAGTATCACCGAATAAACAAAAATGAGGTTTTGTTGCCAGCAGACCTTCACTGCAAGAAATGCTAAAGGAAATTCTTCAGGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417238.5
3UTR CCA 90 bp TTTGCTGATTTGATCTCTATATTCCAATATAGTGGAATCCAGAAGTaGTCTTGTTGGAGCATAGAAGGTTCCAAGGCTTGTCTCAAGCTG +
Preference number: 1 (lower is better)
Translates to: FADLISIFQYSGIQK*SCWSIEGSKACLKL
Trigger: CAGCTTGAGACAAGCCTTGGAACCTTCTATGCTCCAACAAGACCACTTCTGGATTCCACTATATTGGAATATAGAGATCAAATCAGCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417238.5
3UTR GCA 90 bp TTTCAGCCTGAAGAATTTCCTTTAGCATTTCTTGCAGTGAAGGTCTaGTGGCAACAAAACCTCATTTTTGTTTATTCGGTGATACTCCCT +
Preference number: 1 (lower is better)
Translates to: FQPEEFPLAFLAVKV*WQQNLIFVYSVILP
Trigger: AGGGAGTATCACCGAATAAACAAAAATGAGGTTTTGTTGCCAGCAGACCTTCACTGCAAGAAATGCTAAAGGAAATTCTTCAGGCTGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417238.5
3UTR CCA 90 bp TGCCACATTTTCTTAACCCAGTCTATCATTGTTGGACACTTAGGTTaGTTCCAAGTCTTAGCTATTGTGAATAGTGCTGCAATAAACATA +
Preference number: 1 (lower is better)
Translates to: CHIFLTQSIIVGHLG*FQVLAIVNSAAINI
Trigger: TATGTTTATTGCAGCACTATTCACAATAGCTAAGACTTGGAACCAACCTAAGTGTCCAACAATGATAGACTGGGTTAAGAAAATGTGGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409562.7
3UTR-3UTR GCA 90 bp CGACCTCAGCTCACTGCAGCCTCCGCCCTCCGGGTTCACGCCATTCTCCTGCTTAGGCGTGAGCCACCGTaGCTGGCCTATAGATGTCTA +
Preference number: 2 (lower is better)
Translates to: RPQLTAASALRVHAILLLRREPP*LAYRCL
Trigger: TAGACATCTATAGGCCAGGCACGGTGGCTCACGCCT...AAGCAGGAGAATGGCGTGAACCCGGAGGGCGGAGGCTGCAGTGAGCTGAGGTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272321.12
3UTR-3UTR CCA 90 bp GGTGCGACCTCAGCTCACTGCAGCCTCCGCCCTCCGGGTTCACGCCATTCTCCTGTGATCCTTCAGCCTTaGCCTCCTAAAGCACTGGGA +
Preference number: 2 (lower is better)
Translates to: GATSAHCSLRPPGSRHSPVILQP*PPKALG
Trigger: TCCCAGTGCTTTAGGAGGCCAAGGCTGAAGGATCAC...AGGAGAATGGCGTGAACCCGGAGGGCGGAGGCTGCAGTGAGCTGAGGTCGCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272321.12
3UTR-3UTR TCA 90 bp CTCAAGCAATTCTTCTGCCTCAGCTTCACAAGCATGTACCACCATGCCTGGCTACTGGGACTACAGGCATaGGCACTATGCCTGCCCCCT +
Preference number: 2 (lower is better)
Translates to: LKQFFCLSFTSMYHHAWLLGLQA*ALCLPP
Trigger: AGGGGGCAGGCATAGTGCTCATGCCTGTAGTCCCAG...TAGCCAGGCATGGTGGTACATGCTTGTGAAGCTGAGGCAGAAGAATTGCTTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272321.12
ENST00000409199.5
ENST00000409354.6
3UTR-3UTR TCA 90 bp ACACCTGATAAGGCTGTTTGGTGCCAAAGCGAACATCCAGTGGGTCCCATTCTGGCCAAGCATCATCGTTaGCCAGTGGCCACCAGCAAA +
Preference number: 2 (lower is better)
Translates to: TPDKAVWCQSEHPVGPILAKHHR*PVATSK
Trigger: TTTGCTGGTGGCCACTGGTCAACGATGATGCTTGGC...CAGAATGGGACCCACTGGATGTTCGCTTTGGCACCAAACAGCCTTATCAGGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417238.5
3UTR-3UTR TCA 90 bp GGACAGATACTACCTAGCTGTTCCTGCCTATACCACTCTTCTTACTTTAGAGCTATGGTCTCCATCTCCTaGCCTCGTGATTCGCCCGCC +
Preference number: 2 (lower is better)
Translates to: GQILPSCSCLYHSSYFRAMVSIS*PRDSPA
Trigger: GGCGGGCGAATCACGAGGTCAGGAGATGGAGACCAT...AGCTCTAAAGTAAGAAGAGTGGTATAGGCAGGAACAGCTAGGTAGTATCTGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272321.12
3UTR-3UTR GCA 90 bp GTGAACCTGTCAGTGCTAGGACAGATACTACCTAGCTGTTCCTGCCTATACCACCATGAGCACTATGCCTaGCCCCTACTGCCCCTTTTT +
Preference number: 2 (lower is better)
Translates to: VNLSVLGQILPSCSCLYHHEHYA*PLLPLF
Trigger: AAAAAGGGGCAGTAGGGGGCAGGCATAGTGCTCATG...GTGGTATAGGCAGGAACAGCTAGGTAGTATCTGTCCTAGCACTGACAGGTTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272321.12
3UTR-3UTR GCA 90 bp CTCAAGCAATTCTTCTGCCTCAGCTTCACAAGCATGTACCACCATGCCTGGCTACATGAGCACTATGCCTaGCCCCTACTGCCCCTTTTT +
Preference number: 2 (lower is better)
Translates to: LKQFFCLSFTSMYHHAWLHEHYA*PLLPLF
Trigger: AAAAAGGGGCAGTAGGGGGCAGGCATAGTGCTCATG...TAGCCAGGCATGGTGGTACATGCTTGTGAAGCTGAGGCAGAAGAATTGCTTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272321.12
ENST00000409199.5
ENST00000409354.6
3UTR-3UTR GCA 90 bp GCCCAAGGCCAAGCATCATCGTTGACCAGTGGCCACCAGCAAACAACTCTATCAACACACCGACTGTTTTaGATCAGCTCCTCCAACTCT +
Preference number: 2 (lower is better)
Translates to: AQGQASSLTSGHQQTTLSTHRLF*ISSSNS
Trigger: AGAGTTGGAGGAGCTGATGCAAAACAGTCGGTGTGT...TGATAGAGTTGTTTGCTGGTGGCCACTGGTCAACGATGATGCTTGGCCTTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417238.5
3UTR-3UTR CCA 90 bp CTCAAGCAATTCTTCTGCCTCAGCTTCACAAGCATGTACCACCATGCCTGGCTAGTGATCCTTCAGCCTTaGCCTCCTAAAGCACTGGGA +
Preference number: 2 (lower is better)
Translates to: LKQFFCLSFTSMYHHAWLVILQP*PPKALG
Trigger: TCCCAGTGCTTTAGGAGGCCAAGGCTGAAGGATCAC...TAGCCAGGCATGGTGGTACATGCTTGTGAAGCTGAGGCAGAAGAATTGCTTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272321.12
ENST00000409199.5
ENST00000409354.6
3UTR-3UTR CCA 90 bp CCTTTCTCCAGAGGGAAACAGTATCTGTGTTCTAAGGGGCAGTCAGGGCAAATTCAGGTTAGAGTGCAGTaGCGCGATCACAGCTCACTG +
Preference number: 2 (lower is better)
Translates to: PFSRGKQYLCSKGQSGQIQVRVQ*RDHSSL
Trigger: CAGTGAGCTGTGATCGCGCCACTGCACTCTAACCTG...AATTTGCCCTGACTGCCCCTTAGAACACAGATACTGTTTCCCTCTGGAGAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272321.12
3UTR-3UTR TCA 90 bp GAACTCAAATCTCATATAAAAGTTGATAAGCATGCCTGCCCCTTTCTCCAGAGGCTGGGACTACAGGCATaGGCACTATGCCTGCCCCCT +
Preference number: 2 (lower is better)
Translates to: ELKSHIKVDKHACPFLQRLGLQA*ALCLPP
Trigger: AGGGGGCAGGCATAGTGCTCATGCCTGTAGTCCCAG...CCTCTGGAGAAAGGGGCAGGCATGCTTATCAACTTTTATATGAGATTTGAGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000272321.12
3UTR-3UTR TCA 90 bp CTCAAGCAATTCTTCTGCCTCAGCTTCACAAGCATGTACCACCATGCCTGGCTAGAGAACCACCATCTCTaGTTTCCTGTTCTCTGCCGT +
Preference number: 2 (lower is better)
Translates to: LKQFFCLSFTSMYHHAWLENHHL*FPVLCR
Trigger: ACGGCAGAGAACAGGAAATCAGAGATGGTGGTTCTC...TAGCCAGGCATGGTGGTACATGCTTGTGAAGCTGAGGCAGAAGAATTGCTTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409354.6
3UTR-3UTR GCA 90 bp GCCCAAGGCCAAGCATCATCGTTGACCAGTGGCCACCAGCAAACAACTCTATCATCCTTTAGCATTTCTTaGAGTGAAGGTCTGCTGGCA +
Preference number: 2 (lower is better)
Translates to: AQGQASSLTSGHQQTTLSSFSIS*SEGLLA
Trigger: TGCCAGCAGACCTTCACTGCAAGAAATGCTAAAGGA...TGATAGAGTTGTTTGCTGGTGGCCACTGGTCAACGATGATGCTTGGCCTTGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417238.5
3UTR-3UTR CCA 90 bp CTCAAGCAATTCTTCTGCCTCAGCTTCACAAGCATGTACCACCATGCCTGGCTAAATATGTCTGTGGGTTaGGCAAGAGGGAGGGAGGTT +
Preference number: 2 (lower is better)
Translates to: LKQFFCLSFTSMYHHAWLNMSVG*ARGREV
Trigger: AACCTCCCTCCCTCTTGCCCAACCCACAGACATATT...TAGCCAGGCATGGTGGTACATGCTTGTGAAGCTGAGGCAGAAGAATTGCTTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409354.6
3UTR-3UTR TCA 90 bp CCAAGCTTGCTGACAAGAAGCATGATGAGGTCATCAGCAGGGGACAGTCTGGAGTTAGTGGTATTCTGGTaGCTGACACACACTGGATTT +
Preference number: 2 (lower is better)
Translates to: PSLLTRSMMRSSAGDSLELVVFW*LTHTGF
Trigger: AAATCCAGTGTGTGTCAGTCACCAGAATACCACTAA...CTCCAGACTGTCCCCTGCTGATGACCTCATCATGCTTCTTGTCAGCAAGCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417238.5
3UTR-3UTR CCA 90 bp CTCAAGCAATTCTTCTGCCTCAGCTTCACAAGCATGTACCACCATGCCTGGCTACTAGTCTTGAACTCCTaGGCTCAAGTGATCCTTCAG +
Preference number: 2 (lower is better)
Translates to: LKQFFCLSFTSMYHHAWLLVLNS*AQVILQ
Trigger: CTGAAGGATCACTTGAGCCCAGGAGTTCAAGACTAG...TAGCCAGGCATGGTGGTACATGCTTGTGAAGCTGAGGCAGAAGAATTGCTTGAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272321.12
ENST00000409199.5
ENST00000409354.6
3UTR-3UTR CCA 90 bp AAATTTGCAACTCCCCTTGGTTGCTGCCAACTAGCAGAATGGCACCACTTGGGTCCTGATAAGGCTGTTTaGTGCCAAAGCGAACATCCA +
Preference number: 2 (lower is better)
Translates to: KFATPLGCCQLAEWHHLGPDKAV*CQSEHP
Trigger: TGGATGTTCGCTTTGGCACCAAACAGCCTTATCAGG...ACCCAAGTGGTGCCATTCTGCTAGTTGGCAGCAACCAAGGGGAGTTGCAAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417238.5
3UTR CAA 90 bp TTTGCAACTCCCCTTGGTTGCTGCCAACTAGCAGAATGGCACCACTaGGGTGGCAGCTTATTAATGAAGGCAAAAGTTCAGTCTGTGCTA +
Preference number: 2 (lower is better)
Translates to: FATPLGCCQLAEWHH*GGSLLMKAKVQSVL
Trigger: TAGCACAGACTGAACTTTTGCCTTCATTAATAAGCTGCCACCCAAGTGGTGCCATTCTGCTAGTTGGCAGCAACCAAGGGGAGTTGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417238.5
3UTR-3UTR TCA 90 bp GATTTCCTGTTCTCTGCCGTCTTCTCTCAGTTCTCCGTCTTCTGCATTACAGGTGAGGTTATCTGGAAATaGGTCTTCTCCTTGAGGTGC +
Preference number: 2 (lower is better)
Translates to: DFLFSAVFSQFSVFCITGEVIWK*VFSLRC
Trigger: GCACCTCAAGGAGAAGACTCATTTCCAGATAACCTC...ACCTGTAATGCAGAAGACGGAGAACTGAGAGAAGACGGCAGAGAACAGGAAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409354.6
3UTR-3UTR TCA 90 bp CAACAGCACACCCAAAGGTCCTCTTTCAAACCTGAGGAAGAGGAGATCATAGATCTGGGCGTCTGTTTTTaGGCGTCCAAGGATAATCTC +
Preference number: 2 (lower is better)
Translates to: QQHTQRSSFKPEEEEIIDLGVCF*ASKDNL
Trigger: GAGATTATCCTTGGACGCTCAAAAACAGACGCCCAG...ATCTATGATCTCCTCTTCCTCAGGTTTGAAAGAGGACCTTTGGGTGTGCTGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417238.5
3UTR-3UTR TCA 90 bp CAACAGCACACCCAAAGGTCCTCTTTCAAACCTGAGGAAGAGGAGATCATAGATAGACACCAGCACACCTaGACCAAAAAGGAGCTGACA +
Preference number: 2 (lower is better)
Translates to: QQHTQRSSFKPEEEEIIDRHQHT*TKKELT
Trigger: TGTCAGCTCCTTTTTGGTTCAGGTGTGCTGGTGTCT...ATCTATGATCTCCTCTTCCTCAGGTTTGAAAGAGGACCTTTGGGTGTGCTGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417238.5
3UTR-3UTR GCA 90 bp CTGCTGGAGGCATCAAATAATTTACTGAATTGCAGAGTCTCCCTGGGTAAGCGGGATAAGGCTGTTTGGTaGCAAAGCGAACATCCAGTG +
Preference number: 2 (lower is better)
Translates to: LLEASNNLLNCRVSLGKRDKAVW*QSEHPV
Trigger: CACTGGATGTTCGCTTTGGCACCAAACAGCCTTATC...CCGCTTACCCAGGGAGACTCTGCAATTCAGTAAATTATTTGATGCCTCCAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417238.5
3UTR-3UTR CCA 90 bp GATTTCCTGTTCTCTGCCGTCTTCTCTCAGTTCTCCGTCTTCTGCATTACAGGTTGTAAAATATGTCTGTaGGTTGGGCAAGAGGGAGGG +
Preference number: 2 (lower is better)
Translates to: DFLFSAVFSQFSVFCITGCKICL*VGQEGG
Trigger: CCCTCCCTCTTGCCCAACCCACAGACATATTTTACA...ACCTGTAATGCAGAAGACGGAGAACTGAGAGAAGACGGCAGAGAACAGGAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409354.6
3UTR-3UTR GCA 90 bp CAACAGCACACCCAAAGGTCCTCTTTCAAACCTGAGGAAGAGGAGATCATAGATGAATGCATTCATAGATaGAGCTGTCAGCCATGGGCT +
Preference number: 2 (lower is better)
Translates to: QQHTQRSSFKPEEEEIIDECIHR*SCQPWA
Trigger: AGCCCATGGCTGACAGCTGCATCTATGAATGCATTC...ATCTATGATCTCCTCTTCCTCAGGTTTGAAAGAGGACCTTTGGGTGTGCTGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417238.5
3UTR-3UTR CCA 90 bp TCCAGAGGGAAACAGTATCTGTGTTCTAAGGGGCAGTCAGGGCAAATTACTCATCTAGTCTTGAACTCCTaGGCTCAAGTGATCCTTCAG +
Preference number: 2 (lower is better)
Translates to: SRGKQYLCSKGQSGQITHLVLNS*AQVILQ
Trigger: CTGAAGGATCACTTGAGCCCAGGAGTTCAAGACTAG...ATGAGTAATTTGCCCTGACTGCCCCTTAGAACACAGATACTGTTTCCCTCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272321.12
3UTR-3UTR CCA 90 bp TACGGAGTGCTCCACTGTGAACACCTGATAAGGCTGTTTGGTGCCAAAGCGAACATCCAAGTTTCCATCTaGTATCATTTCCTTTCAGCC +
Preference number: 2 (lower is better)
Translates to: YGVLHCEHLIRLFGAKANIQVSI*YHFLSA
Trigger: GGCTGAAAGGAAATGATACCAGATGGAAACTTGGAT...GTTCGCTTTGGCACCAAACAGCCTTATCAGGTGTTCACAGTGGAGCACTCCGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417238.5
3UTR-3UTR CCA 90 bp GCTTGTCTCAAGCTGTGCTTCTCTCTCTGGAGTGAGCTTCTGTCTAAGAAGATGACCATGCTCTGTCGCTaGTGGATCTTTCTTGTCATA +
Preference number: 2 (lower is better)
Translates to: ACLKLCFSLWSELLSKKMTMLCR*WIFLVI
Trigger: TATGACAAGAAAGATCCACCAGCGACAGAGCATGGT...CATCTTCTTAGACAGAAGCTCACTCCAGAGAGAGAAGCACAGCTTGAGACAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417238.5
3UTR-3UTR TCA 90 bp CTCAAGCAATTCTTCTGCCTCAGCTTCACAAGCATGTACCACCATGCCTGGCTATACACCAGACCAAAGTaGATCATTTTGAGAGAACCA +
Preference number: 2 (lower is better)
Translates to: LKQFFCLSFTSMYHHAWLYTRPK*IILREP
Trigger: TGGTTCTCTCAAAATGATTCACTTTGGTCTGGTGTA...TAGCCAGGCATGGTGGTACATGCTTGTGAAGCTGAGGCAGAAGAATTGCTTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409354.6
3UTR-3UTR TCA 90 bp GTATACATGTGCCATGGTGGTGTGCTGCACCCATTAACTCGTCATTTAGCATTAATGCGGCATTATTTCTaGGGGCTCTGTTCTGTTCCA +
Preference number: 2 (lower is better)
Translates to: VYMCHGGVLHPLTRHLALMRHYF*GLCSVP
Trigger: TGGAACAGAACAGAGCCCTCAGAAATAATGCCGCAT...TAATGCTAAATGACGAGTTAATGGGTGCAGCACACCACCATGGCACATGTATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409562.7
3UTR-3UTR TCA 90 bp AAATTTGCAACTCCCCTTGGTTGCTGCCAACTAGCAGAATGGCACCACTTGGGTGAACCAAAAAGGAGCTaGCAGACATATTTGTTCTTC +
Preference number: 2 (lower is better)
Translates to: KFATPLGCCQLAEWHHLGEPKRS*QTYLFF
Trigger: GAAGAACAAATATGTCTGTCAGCTCCTTTTTGGTTC...ACCCAAGTGGTGCCATTCTGCTAGTTGGCAGCAACCAAGGGGAGTTGCAAATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417238.5
3UTR-3UTR CCA 90 bp AAATTTGCAACTCCCCTTGGTTGCTGCCAACTAGCAGAATGGCACCACTTGGGTATGCTCTGTCGCTGGTaGATCTTTCTTGTCATAATA +
Preference number: 2 (lower is better)
Translates to: KFATPLGCCQLAEWHHLGMLCRW*IFLVII
Trigger: TATTATGACAAGAAAGATCCACCAGCGACAGAGCAT...ACCCAAGTGGTGCCATTCTGCTAGTTGGCAGCAACCAAGGGGAGTTGCAAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417238.5
3UTR-3UTR TCA 90 bp GTGCCATGGTGGTGTGCTGCACCCATTAACTCGTCATTTAGCATTAGGTATATCTTCCATTCCCACCTATaGGTGAGAACATATGGTGTT +
Preference number: 2 (lower is better)
Translates to: VPWWCAAPINSSFSIRYIFHSHL*VRTYGV
Trigger: AACACCATATGTTCTCACTCATAGGTGGGAATGGAA...GATATACCTAATGCTAAATGACGAGTTAATGGGTGCAGCACACCACCATGGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409562.7
3UTR-3UTR GCA 90 bp TTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCCATCCCATTCTGTAGGTTaGCTGTCCACTCTGATGGTA +
Preference number: 2 (lower is better)
Translates to: LGIYPVMGWLGQMVFLVPSHSVG*LSTLMV
Trigger: TACCATCAGAGTGGACAGGCAACCTACAGAATGGGA...TGGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409562.7
3UTR-3UTR CCA 90 bp GTGCCATGGTGGTGTGCTGCACCCATTAACTCGTCATTTAGCATTAGGTATATCCCAGTCTATCATTGTTaGACACTTAGGTTGGTTCCA +
Preference number: 2 (lower is better)
Translates to: VPWWCAAPINSSFSIRYIPVYHC*TLRLVP
Trigger: TGGAACCAACCTAAGTGTCCAACAATGATAGACTGG...GATATACCTAATGCTAAATGACGAGTTAATGGGTGCAGCACACCACCATGGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409562.7
3UTR-3UTR TCA 90 bp TGCATTCATAGATGCAGCTGTCAGCCATGGGCTCTTTGTCTACACTTACGGAGTCTTATAATCCAAGGCTaGGAGTTTTTCCAGTCTTTT +
Preference number: 2 (lower is better)
Translates to: CIHRCSCQPWALCLHLRSLIIQG*EFFQSF
Trigger: AAAAGACTGGAAAAACTCTCAGCCTTGGATTATAAG...ACTCCGTAAGTGTAGACAAAGAGCCCATGGCTGACAGCTGCATCTATGAATGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417238.5
3UTR-3UTR TCA 90 bp CTGCTGGAGGCATCAAATAATTTACTGAATTGCAGAGTCTCCCTGGGTAAGCGGCAAACAACTCTATCATaGACACAGTTGATAGCTAGA +
Preference number: 2 (lower is better)
Translates to: LLEASNNLLNCRVSLGKRQTTLS*TQLIAR
Trigger: TCTAGCTATCAACTGTGTTCATGATAGAGTTGTTTG...CCGCTTACCCAGGGAGACTCTGCAATTCAGTAAATTATTTGATGCCTCCAGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417238.5
3UTR-3UTR GCA 90 bp CTCAAGCAATTCTTCTGCCTCAGCTTCACAAGCATGTACCACCATGCCTGGCTATACTTACGATCACTTTaGTGTTATGCTGCATGTTTT +
Preference number: 2 (lower is better)
Translates to: LKQFFCLSFTSMYHHAWLYLRSL*CYAACF
Trigger: AAAACATGCAGCATAACAGCAAAGTGATCGTAAGTA...TAGCCAGGCATGGTGGTACATGCTTGTGAAGCTGAGGCAGAAGAATTGCTTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272321.12
ENST00000409199.5
ENST00000409354.6
3UTR-3UTR CCA 90 bp GTGAACCTGTCAGTGCTAGGACAGATACTACCTAGCTGTTCCTGCCTATACCACTTTACCCGGAAAATCTaGAGAAAATTCTGCAATCTT +
Preference number: 2 (lower is better)
Translates to: VNLSVLGQILPSCSCLYHFTRKI*RKFCNL
Trigger: AAGATTGCAGAATTTTCTCCAGATTTTCCGGGTAAA...GTGGTATAGGCAGGAACAGCTAGGTAGTATCTGTCCTAGCACTGACAGGTTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272321.12
3UTR-3UTR CCA 90 bp GTATACATGTGCCATGGTGGTGTGCTGCACCCATTAACTCGTCATTTAGCATTATGCCTGTGTCCTGAATaGTATTGCCTAGGTTTTCTT +
Preference number: 2 (lower is better)
Translates to: VYMCHGGVLHPLTRHLALCLCPE*YCLGFL
Trigger: AAGAAAACCTAGGCAATACCATTCAGGACACAGGCA...TAATGCTAAATGACGAGTTAATGGGTGCAGCACACCACCATGGCACATGTATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409562.7
3UTR-3UTR CCA 90 bp CAACAGCACACCCAAAGGTCCTCTTTCAAACCTGAGGAAGAGGAGATCATAGATGTGACTGACACACACTaGATTTTATTCCGAATGCAT +
Preference number: 2 (lower is better)
Translates to: QQHTQRSSFKPEEEEIIDVTDTH*ILFRMH
Trigger: ATGCATTCGGAATAAAATCCAGTGTGTGTCAGTCAC...ATCTATGATCTCCTCTTCCTCAGGTTTGAAAGAGGACCTTTGGGTGTGCTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417238.5
3UTR-3UTR TCA 90 bp TCCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGACCCATGCCTGTGTCCTaGATGGTATTGCCTAGGTTT +
Preference number: 2 (lower is better)
Translates to: STLMVVSFAVQKLFSLIRPMPVS*MVLPRF
Trigger: AAACCTAGGCAATACCATTCAGGACACAGGCATGGG...TCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409562.7
3UTR-3UTR GCA 90 bp CTGATGGCCTTTGACTTTAGTGGTATTCTGGTGACTGACACACACTGGATTTTATTCAAAGACCACAGGTaGAGTTCAGTCAAGCAGAAA +
Preference number: 2 (lower is better)
Translates to: LMAFDFSGILVTDTHWILFKDHR*SSVKQK
Trigger: TTTCTGCTTGACTGAACTGCACCTGTGGTCTTTGAA...TAAAATCCAGTGTGTGTCAGTCACCAGAATACCACTAAAGTCAAAGGCCATCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417238.5
3UTR-3UTR TCA 90 bp TTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCCAGCACATGTTGTTTGCTaGCTTTTTAATGATCACCAT +
Preference number: 2 (lower is better)
Translates to: LGIYPVMGWLGQMVFLVPAHVVC*LFNDHH
Trigger: ATGGTGATCATTAAAAAGTCAGCAAACAACATGTGC...TGGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409562.7
3UTR-3UTR GCA 90 bp GGACAGATACTACCTAGCTGTTCCTGCCTATACCACTCTTCTTACTTTAGAGCTTACTTACGATCACTTTaGTGTTATGCTGCATGTTTT +
Preference number: 2 (lower is better)
Translates to: GQILPSCSCLYHSSYFRAYLRSL*CYAACF
Trigger: AAAACATGCAGCATAACAGCAAAGTGATCGTAAGTA...AGCTCTAAAGTAAGAAGAGTGGTATAGGCAGGAACAGCTAGGTAGTATCTGTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272321.12
3UTR CAA 90 bp CAGGGCAAATTACTCATAGCAGTAATTCGAGAGAACCATGGAGAATaGTCTTCTAACAATGGATCTGGGCTGAAAAATTTGCATAATAAA +
Preference number: 2 (lower is better)
Translates to: QGKLLIAVIRENHGE*SSNNGSGLKNLHNK
Trigger: TTTATTATGCAAATTTTTCAGCCCAGATCCATTGTTAGAAGACAATTCTCCATGGTTCTCTCGAATTACTGCTATGAGTAATTTGCCCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272321.12
3UTR-3UTR CAA 90 bp CGACCTCAGCTCACTGCAGCCTCCGCCCTCCGGGTTCACGCCATTCTCCTGCTTGAGAACCATGGAGAATaGTCTTCTAACAATGGATCT +
Preference number: 3 (lower is better)
Translates to: RPQLTAASALRVHAILLLENHGE*SSNNGS
Trigger: AGATCCATTGTTAGAAGACAATTCTCCATGGTTCTC...AAGCAGGAGAATGGCGTGAACCCGGAGGGCGGAGGCTGCAGTGAGCTGAGGTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272321.12
3UTR CCA 72 bp CTGATAAGGCTGTTTGGTGCCAAAGCGAACATCCAGTaGGTCCCATTCTGTGCGGACAGAACTCAGAACCTC +
Preference number: 3 (lower is better)
Translates to: LIRLFGAKANIQ*VPFCADRTQNL
Trigger: GAGGTTCTGAGTTCTGTCCGCACAGAATGGGACCCACTGGATGTTCGCTTTGGCACCAAACAGCCTTATCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417238.5
3UTR-3UTR CAA 90 bp ACACCTGATAAGGCTGTTTGGTGCCAAAGCGAACATCCAGTGGGTCCCATTCTGAGCTCCTCCAACTCTTaGAGCGAGTCTCGGAGTTTT +
Preference number: 3 (lower is better)
Translates to: TPDKAVWCQSEHPVGPILSSSNS*SESRSF
Trigger: AAAACTCCGAGACTCGCTCAAAGAGTTGGAGGAGCT...CAGAATGGGACCCACTGGATGTTCGCTTTGGCACCAAACAGCCTTATCAGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417238.5
3UTR TCA 72 bp CAGAAGAAATGGGGGCCCAAGGCCAAGCATCATCGTTaGCCAGTGGCCACCAGCAAACAACTCTATCATGAA +
Preference number: 3 (lower is better)
Translates to: QKKWGPKAKHHR*PVATSKQLYHE
Trigger: TTCATGATAGAGTTGTTTGCTGGTGGCCACTGGTCAACGATGATGCTTGGCCTTGGGCCCCCATTTCTTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417238.5
3UTR GCA 72 bp GAGCCATATCAAAAATTTGCAACTCCCCTTGGTTGCTaGCAACTAGCAGAATGGCACCACTTGGGTGGCAGC +
Preference number: 3 (lower is better)
Translates to: EPYQKFATPLGC*QLAEWHHLGGS
Trigger: GCTGCCACCCAAGTGGTGCCATTCTGCTAGTTGGCAGCAACCAAGGGGAGTTGCAAATTTTTGATATGGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417238.5
3UTR CCA 72 bp AATGGGGGCCCAAGGCCAAGCATCATCGTTGACCAGTaGCCACCAGCAAACAACTCTATCATGAACACAGTT +
Preference number: 3 (lower is better)
Translates to: NGGPRPSIIVDQ*PPANNSIMNTV
Trigger: AACTGTGTTCATGATAGAGTTGTTTGCTGGTGGCCACTGGTCAACGATGATGCTTGGCCTTGGGCCCCCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417238.5
3UTR-3UTR CAA 90 bp TACGGAGTGCTCCACTGTGAACACCTGATAAGGCTGTTTGGTGCCAAAGCGAACTGTCGCTCTGTTGTCTaGTTTATTGGGCCGGGTATT +
Preference number: 3 (lower is better)
Translates to: YGVLHCEHLIRLFGAKANCRSVV*FIGPGI
Trigger: AATACCCGGCCCAATAAACAAGACAACAGAGCGACA...GTTCGCTTTGGCACCAAACAGCCTTATCAGGTGTTCACAGTGGAGCACTCCGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417238.5
3UTR TCA 72 bp TGGGCTCTTTGTCTACACTTACGGAGTGCTCCACTGTaGACACCTGATAAGGCTGTTTGGTGCCAAAGCGAA +
Preference number: 3 (lower is better)
Translates to: WALCLHLRSAPL*TPDKAVWCQSE
Trigger: TTCGCTTTGGCACCAAACAGCCTTATCAGGTGTTCACAGTGGAGCACTCCGTAAGTGTAGACAAAGAGCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417238.5
3UTR CCA 72 bp CTCCTCCAACTCTTTGAGCGAGTCTCGGAGTTTTTCTaGGCGTCTGTTTTTGAGCGTCCAAGGATAATCTCG +
Preference number: 3 (lower is better)
Translates to: LLQLFERVSEFF*ASVFERPRIIS
Trigger: CGAGATTATCCTTGGACGCTCAAAAACAGACGCCCAGAAAAACTCCGAGACTCGCTCAAAGAGTTGGAGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000417238.5
3UTR CCA 72 bp TTTGCAACTCCCCTTGGTTGCTGCCAACTAGCAGAATaGCACCACTTGGGTGGCAGCTTATTAATGAAGGCA +
Preference number: 3 (lower is better)
Translates to: FATPLGCCQLAE*HHLGGSLLMKA
Trigger: TGCCTTCATTAATAAGCTGCCACCCAAGTGGTGCCATTCTGCTAGTTGGCAGCAACCAAGGGGAGTTGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417238.5
3UTR-3UTR CAA 90 bp CCAAGCTTGCTGACAAGAAGCATGATGAGGTCATCAGCAGGGGACAGTCTGGAGTGCTCAGGATGTTTATaGCCTCATAGATCTCATCAC +
Preference number: 3 (lower is better)
Translates to: PSLLTRSMMRSSAGDSLECSGCL*PHRSHH
Trigger: GTGATGAGATCTATGAGGCAATAAACATCCTGAGCA...CTCCAGACTGTCCCCTGCTGATGACCTCATCATGCTTCTTGTCAGCAAGCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417238.5
3UTR GCA 72 bp ATAGAGCCATATCAAAAATTTGCAACTCCCCTTGGTTaGTGCCAACTAGCAGAATGGCACCACTTGGGTGGC +
Preference number: 3 (lower is better)
Translates to: IEPYQKFATPLG*CQLAEWHHLGG
Trigger: GCCACCCAAGTGGTGCCATTCTGCTAGTTGGCAGCAACCAAGGGGAGTTGCAAATTTTTGATATGGCTCTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417238.5
3UTR CCA 72 bp TATTCCGAATGCATTCATAGATGCAGCTGTCAGCCATaGGCTCTTTGTCTACACTTACGGAGTGCTCCACTG +
Preference number: 3 (lower is better)
Translates to: YSECIHRCSCQP*ALCLHLRSAPL
Trigger: CAGTGGAGCACTCCGTAAGTGTAGACAAAGAGCCCATGGCTGACAGCTGCATCTATGAATGCATTCGGAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417238.5
3UTR-3UTR CAA 90 bp AGTCCTTGCCCATGCCTGTGTCCTGAATGGTATTGCCTAGGTTTTCTTCTAGGGGTCTATATCTCTGTTTaGGGACCAGTACCATGCTGT +
Preference number: 3 (lower is better)
Translates to: SPCPCLCPEWYCLGFLLGVYISV*GPVPCC
Trigger: ACAGCATGGTACTGGTCCCAAAACAGAGATATAGAC...CCCTAGAAGAAAACCTAGGCAATACCATTCAGGACACAGGCATGGGCAAGGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409562.7
3UTR-3UTR CAA 90 bp ACTAGCAGAATGGCACCACTTGGGTGGCAGCTTATTAATGAAGGCAAAAGTTCACACACACCGACTGTTTaGCATCAGCTCCTCCAACTC +
Preference number: 3 (lower is better)
Translates to: TSRMAPLGWQLINEGKSSHTPTV*HQLLQL
Trigger: GAGTTGGAGGAGCTGATGCAAAACAGTCGGTGTGTG...TGAACTTTTGCCTTCATTAATAAGCTGCCACCCAAGTGGTGCCATTCTGCTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417238.5
3UTR-3UTR CAA 90 bp CTCAAGCAATTCTTCTGCCTCAGCTTCACAAGCATGTACCACCATGCCTGGCTAGATTCATACTGTCTCTaGTTAAAAATCCACACGGGG +
Preference number: 3 (lower is better)
Translates to: LKQFFCLSFTSMYHHAWLDSYCL*LKIHTG
Trigger: CCCCGTGTGGATTTTTAACAAGAGACAGTATGAATC...TAGCCAGGCATGGTGGTACATGCTTGTGAAGCTGAGGCAGAAGAATTGCTTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272321.12
ENST00000409199.5
ENST00000409354.6
3UTR TCA 72 bp TCGTTGACCAGTGGCCACCAGCAAACAACTCTATCATaGACACAGTTGATAGCTAGATGTCGCTCTGTTGTC +
Preference number: 3 (lower is better)
Translates to: SLTSGHQQTTLS*TQLIARCRSVV
Trigger: GACAACAGAGCGACATCTAGCTATCAACTGTGTTCATGATAGAGTTGTTTGCTGGTGGCCACTGGTCAACGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417238.5
3UTR GCA 72 bp TCCTATAGAGCAATGTTAAGAGGGCTAGATGACACCTaGACACTCAATGGGCAGTGTAAAGGAGAGGCATTC +
Preference number: 3 (lower is better)
Translates to: SYRAMLRGLDDT*TLNGQCKGEAF
Trigger: GAATGCCTCTCCTTTACACTGCCCATTGAGTGTGCAGGTGTCATCTAGCCCTCTTAACATTGCTCTATAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272321.12
3UTR GCA 72 bp ACAAGACTGCTGGAGGCATCAAATAATTTACTGAATTaGAGAGTCTCCCTGGGTAAGCGGTCTTCAGCCAAC +
Preference number: 3 (lower is better)
Translates to: TRLLEASNNLLN*RVSLGKRSSAN
Trigger: GTTGGCTGAAGACCGCTTACCCAGGGAGACTCTGCAATTCAGTAAATTATTTGATGCCTCCAGCAGTCTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417238.5
3UTR CCA 72 bp TGGTTGCTGCCAACTAGCAGAATGGCACCACTTGGGTaGCAGCTTATTAATGAAGGCAAAAGTTCAGTCTGT +
Preference number: 3 (lower is better)
Translates to: WLLPTSRMAPLG*QLINEGKSSVC
Trigger: ACAGACTGAACTTTTGCCTTCATTAATAAGCTGCCACCCAAGTGGTGCCATTCTGCTAGTTGGCAGCAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417238.5
3UTR CCA 72 bp GCTTCTCTCTCTGGAGTGAGCTTCTGTCTAAGAAGATaGTTTACAATGGCGCTCATGCTGATAAAGCACTGG +
Preference number: 3 (lower is better)
Translates to: ASLSGVSFCLRR*FTMALMLIKHW
Trigger: CCAGTGCTTTATCAGCATGAGCGCCATTGTAAACCATCTTCTTAGACAGAAGCTCACTCCAGAGAGAGAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417238.5
3UTR-3UTR CAA 90 bp GTATACATGTGCCATGGTGGTGTGCTGCACCCATTAACTCGTCATTTAGCATTATGTCCTTGCGGTAGTTaGCTGAGAATGATGGTTTCC +
Preference number: 3 (lower is better)
Translates to: VYMCHGGVLHPLTRHLALCPCGS*LRMMVS
Trigger: GGAAACCATCATTCTCAGCAAACTACCGCAAGGACA...TAATGCTAAATGACGAGTTAATGGGTGCAGCACACCACCATGGCACATGTATAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409562.7
3UTR-3UTR CAA 90 bp CTCAAGCAATTCTTCTGCCTCAGCTTCACAAGCATGTACCACCATGCCTGGCTATTACTTACGATCACTTaGCTGTTATGCTGCATGTTT +
Preference number: 3 (lower is better)
Translates to: LKQFFCLSFTSMYHHAWLLLTIT*LLCCMF
Trigger: AAACATGCAGCATAACAGCAAAGTGATCGTAAGTAA...TAGCCAGGCATGGTGGTACATGCTTGTGAAGCTGAGGCAGAAGAATTGCTTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272321.12
ENST00000409199.5
ENST00000409354.6
3UTR-3UTR CAA 90 bp TTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCCAGTCTGTTCATATCCTTaGCCCACTTTTGGATGGGGT +
Preference number: 3 (lower is better)
Translates to: LGIYPVMGWLGQMVFLVPVCSYP*PTFGWG
Trigger: ACCCCATCCAAAAGTGGGCAAAGGATATGAACAGAC...TGGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409562.7
3UTR-3UTR CAA 90 bp TACGGTGAGTTTCATAAAGAATTAGCGAAGAATCTTCACAGCCCAGAATCAGTTCCCAGGAGGAGTAGATaGGCTCTGTCCTTCTCAGAA +
Preference number: 3 (lower is better)
Translates to: YGEFHKELAKNLHSPESVPRRSR*ALSFSE
Trigger: TTCTGAGAAGGACAGAGCCAATCTACTCCTCCTGGG...AACTGATTCTGGGCTGTGAAGATTCTTCGCTAATTCTTTATGAAACTCACCGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417238.5
3UTR-3UTR CAA 90 bp GTGCTAAGAGAGTCACTCTACGGTGAGTTTCATAAAGAATTAGCGAAGAATCTTTCAGCCATGGGCTCTTaGTCTACACTTACGGAGTGC +
Preference number: 3 (lower is better)
Translates to: VLRESLYGEFHKELAKNLSAMGS*STLTEC
Trigger: GCACTCCGTAAGTGTAGACAAAGAGCCCATGGCTGA...AAGATTCTTCGCTAATTCTTTATGAAACTCACCGTAGAGTGACTCTCTTAGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417238.5
3UTR TCA 72 bp GTTTTAGACATGAAGTCCTTGCCCATGCCTGTGTCCTaGATGGTATTGCCTAGGTTTTCTTCTAGGGCTTTT +
Preference number: 3 (lower is better)
Translates to: VLDMKSLPMPVS*MVLPRFSSRAF
Trigger: AAAAGCCCTAGAAGAAAACCTAGGCAATACCATTCAGGACACAGGCATGGGCAAGGACTTCATGTCTAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409562.7
3UTR TCA 72 bp TTTGAACAAGACTGCTGGAGGCATCAAATAATTTACTaGATTGCAGAGTCTCCCTGGGTAAGCGGTCTTCAG +
Preference number: 3 (lower is better)
Translates to: FEQDCWRHQIIY*IAESPWVSGLQ
Trigger: CTGAAGACCGCTTACCCAGGGAGACTCTGCAATTCAGTAAATTATTTGATGCCTCCAGCAGTCTTGTTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417238.5
3UTR GCA 72 bp CTGTCAGTGCTAGGACAGATACTACCTAGCTGTTCCTaGCTATACCACTCTTCTTACTTTAGAGCTATGGTA +
Preference number: 3 (lower is better)
Translates to: LSVLGQILPSCS*LYHSSYFRAMV
Trigger: TACCATAGCTCTAAAGTAAGAAGAGTGGTATAGGCAGGAACAGCTAGGTAGTATCTGTCCTAGCACTGACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272321.12
3UTR GCA 72 bp CAGAGTGTCCCAGTTCATGCTGCTCAGGATGTTTATTaGCTCATAGATCTCATCACAGTGAATGTACTGGAA +
Preference number: 3 (lower is better)
Translates to: QSVPVHAAQDVY*LIDLITVNVLE
Trigger: TTCCAGTACATTCACTGTGATGAGATCTATGAGGCAATAAACATCCTGAGCAGCATGAACTGGGACACTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417238.5
3UTR CCA 72 bp AGAGTCTCCCTGGGTAAGCGGTCTTCAGCCAACAGTTaGATGTTAATAGGGGATAGAGCCATATCAAAAATT +
Preference number: 3 (lower is better)
Translates to: RVSLGKRSSANS*MLIGDRAISKI
Trigger: AATTTTTGATATGGCTCTATCCCCTATTAACATCCAACTGTTGGCTGAAGACCGCTTACCCAGGGAGACTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417238.5
3UTR-3UTR CAA 90 bp GGACAGATACTACCTAGCTGTTCCTGCCTATACCACTCTTCTTACTTTAGAGCTGATTCATACTGTCTCTaGTTAAAAATCCACACGGGG +
Preference number: 3 (lower is better)
Translates to: GQILPSCSCLYHSSYFRADSYCL*LKIHTG
Trigger: CCCCGTGTGGATTTTTAACAAGAGACAGTATGAATC...AGCTCTAAAGTAAGAAGAGTGGTATAGGCAGGAACAGCTAGGTAGTATCTGTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272321.12
3UTR-3UTR CAA 90 bp GATTTCCTGTTCTCTGCCGTCTTCTCTCAGTTCTCCGTCTTCTGCATTACAGGTCCTTCTGTCAATTATTaGTCTGTTAGAAGAGCCATT +
Preference number: 3 (lower is better)
Translates to: DFLFSAVFSQFSVFCITGPSVNY*SVRRAI
Trigger: AATGGCTCTTCTAACAGACAAATAATTGACAGAAGG...ACCTGTAATGCAGAAGACGGAGAACTGAGAGAAGACGGCAGAGAACAGGAAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409354.6
3UTR-3UTR CAA 90 bp GTGCCATGGTGGTGTGCTGCACCCATTAACTCGTCATTTAGCATTAGGTATATCCTCTGTTCTGTTCCATaGGTCTATATCTCTGTTTTG +
Preference number: 3 (lower is better)
Translates to: VPWWCAAPINSSFSIRYILCSVP*VYISVL
Trigger: CAAAACAGAGATATAGACCAATGGAACAGAACAGAG...GATATACCTAATGCTAAATGACGAGTTAATGGGTGCAGCACACCACCATGGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409562.7
3UTR-3UTR CAA 90 bp GCTTGTCTCAAGCTGTGCTTCTCTCTCTGGAGTGAGCTTCTGTCTAAGAAGATGAGTTTTTCCAGTCTTTaGTTTACATCAGAAGACTCC +
Preference number: 3 (lower is better)
Translates to: ACLKLCFSLWSELLSKKMSFSSL*FTSEDS
Trigger: GGAGTCTTCTGATGTAAACAAAAGACTGGAAAAACT...CATCTTCTTAGACAGAAGCTCACTCCAGAGAGAGAAGCACAGCTTGAGACAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417238.5
3UTR GCA 72 bp ACACACACTGGATTTTATTCCGAATGCATTCATAGATaGAGCTGTCAGCCATGGGCTCTTTGTCTACACTTA +
Preference number: 3 (lower is better)
Translates to: THTGFYSECIHR*SCQPWALCLHL
Trigger: TAAGTGTAGACAAAGAGCCCATGGCTGACAGCTGCATCTATGAATGCATTCGGAATAAAATCCAGTGTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417238.5
3UTR CCA 72 bp ATATTCCAATATAGTGGAATCCAGAAGTGGTCTTGTTaGAGCATAGAAGGTTCCAAGGCTTGTCTCAAGCTG +
Preference number: 3 (lower is better)
Translates to: IFQYSGIQKWSC*SIEGSKACLKL
Trigger: CAGCTTGAGACAAGCCTTGGAACCTTCTATGCTCCAACAAGACCACTTCTGGATTCCACTATATTGGAATAT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417238.5
3UTR GCA 72 bp GAACTCAAATCTCATATAAAAGTTGATAAGCATGCCTaGCCCTTTCTCCAGAGGGAAACAGTATCTGTGTTC +
Preference number: 3 (lower is better)
Translates to: ELKSHIKVDKHA*PFLQRETVSVF
Trigger: GAACACAGATACTGTTTCCCTCTGGAGAAAGGGGCAGGCATGCTTATCAACTTTTATATGAGATTTGAGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272321.12
3UTR-3UTR CAA 90 bp GAACTCAAATCTCATATAAAAGTTGATAAGCATGCCTGCCCCTTTCTCCAGAGGTTACTTACGATCACTTaGCTGTTATGCTGCATGTTT +
Preference number: 3 (lower is better)
Translates to: ELKSHIKVDKHACPFLQRLLTIT*LLCCMF
Trigger: AAACATGCAGCATAACAGCAAAGTGATCGTAAGTAA...CCTCTGGAGAAAGGGGCAGGCATGCTTATCAACTTTTATATGAGATTTGAGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272321.12
3UTR CCA 72 bp ATTTATAATCCTTTGGGTATATACCCAGTAATGGGATaGCTGGGTCAAATGGTATTTCTAGTTCCAGATCCC +
Preference number: 3 (lower is better)
Translates to: IYNPLGIYPVMG*LGQMVFLVPDP
Trigger: GGGATCTGGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGATTATAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409562.7
3UTR CCA 72 bp TTGATCTCTATATTCCAATATAGTGGAATCCAGAAGTaGTCTTGTTGGAGCATAGAAGGTTCCAAGGCTTGT +
Preference number: 3 (lower is better)
Translates to: LISIFQYSGIQK*SCWSIEGSKAC
Trigger: ACAAGCCTTGGAACCTTCTATGCTCCAACAAGACCACTTCTGGATTCCACTATATTGGAATATAGAGATCAA
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417238.5
3UTR-3UTR CAA 90 bp GAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCACATCTGTCAGATGAGTAGGTaGCAAAAATTTTCTCCCATT +
Preference number: 3 (lower is better)
Translates to: ELVYSPTNSVKVFLFLHICQMSR*QKFSPI
Trigger: AATGGGAGAAAATTTTTGCAACCTACTCATCTGACA...GATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409562.7
3UTR TCA 72 bp TCTGCTGGCAACAAAACCTCATTTTTGTTTATTCGGTaGTACTCCCTCTTTCCAAGTATAGACTTCCTTTCA +
Preference number: 3 (lower is better)
Translates to: SAGNKTSFLFIR*YSLFPSIDFLS
Trigger: TGAAAGGAAGTCTATACTTGGAAAGAGGGAGTATCACCGAATAAACAAAAATGAGGTTTTGTTGCCAGCAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417238.5
3UTR GCA 72 bp GAAGAATTTCCTTTAGCATTTCTTGCAGTGAAGGTCTaGTGGCAACAAAACCTCATTTTTGTTTATTCGGTG +
Preference number: 3 (lower is better)
Translates to: EEFPLAFLAVKV*WQQNLIFVYSV
Trigger: CACCGAATAAACAAAAATGAGGTTTTGTTGCCAGCAGACCTTCACTGCAAGAAATGCTAAAGGAAATTCTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417238.5
3UTR CCA 72 bp GAATTTCCTTTAGCATTTCTTGCAGTGAAGGTCTGCTaGCAACAAAACCTCATTTTTGTTTATTCGGTGATA +
Preference number: 3 (lower is better)
Translates to: EFPLAFLAVKVC*QQNLIFVYSVI
Trigger: TATCACCGAATAAACAAAAATGAGGTTTTGTTGCCAGCAGACCTTCACTGCAAGAAATGCTAAAGGAAATTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS-3UTR TCA 90 bp GGTGCGACCTCAGCTCACTGCAGCCTCCGCCCTCCGGGTTCACGCCATTCTCCTCGGAGTGCTCCACTGTaGACACCTGATAAGGCTGTT +
Preference number: 4 (lower is better)
Translates to: GATSAHCSLRPPGSRHSPRSAPL*TPDKAV
Trigger: AACAGCCTTATCAGGTGTTCACAGTGGAGCACTCCG...AGGAGAATGGCGTGAACCCGGAGGGCGGAGGCTGCAGTGAGCTGAGGTCGCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR CCA 90 bp CGACCTCAGCTCACTGCAGCCTCCGCCCTCCGGGTTCACGCCATTCTCCTGCTTTGCCAACTAGCAGAATaGCACCACTTGGGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: RPQLTAASALRVHAILLLCQLAE*HHLGGS
Trigger: GCTGCCACCCAAGTGGTGCCATTCTGCTAGTTGGCA...AAGCAGGAGAATGGCGTGAACCCGGAGGGCGGAGGCTGCAGTGAGCTGAGGTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR TCA 90 bp GGTGCGACCTCAGCTCACTGCAGCCTCCGCCCTCCGGGTTCACGCCATTCTCCTGCTCCTCCAACTCTTTaGGCGAGTCTCGGAGTTTTT +
Preference number: 4 (lower is better)
Translates to: GATSAHCSLRPPGSRHSPAPPTL*ASLGVF
Trigger: AAAAACTCCGAGACTCGCTCAAAGAGTTGGAGGAGC...AGGAGAATGGCGTGAACCCGGAGGGCGGAGGCTGCAGTGAGCTGAGGTCGCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR TCA 90 bp GGTGCGACCTCAGCTCACTGCAGCCTCCGCCCTCCGGGTTCACGCCATTCTCCTGAGAACCACCATCTCTaGTTTCCTGTTCTCTGCCGT +
Preference number: 4 (lower is better)
Translates to: GATSAHCSLRPPGSRHSPENHHL*FPVLCR
Trigger: ACGGCAGAGAACAGGAAATCAGAGATGGTGGTTCTC...AGGAGAATGGCGTGAACCCGGAGGGCGGAGGCTGCAGTGAGCTGAGGTCGCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR CCA 90 bp CGACCTCAGCTCACTGCAGCCTCCGCCCTCCGGGTTCACGCCATTCTCCTGCTTATGCTGATAAAGCACTaGTGGCCCAGAGTGTCCCAG +
Preference number: 4 (lower is better)
Translates to: RPQLTAASALRVHAILLLMLIKH*WPRVSQ
Trigger: CTGGGACACTCTGGGCCACCAGTGCTTTATCAGCAT...AAGCAGGAGAATGGCGTGAACCCGGAGGGCGGAGGCTGCAGTGAGCTGAGGTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR TCA 90 bp CGACCTCAGCTCACTGCAGCCTCCGCCCTCCGGGTTCACGCCATTCTCCTGCTTCATTCCTGCAGCAGCTaGTGGCCTTTGACTTTAGTG +
Preference number: 4 (lower is better)
Translates to: RPQLTAASALRVHAILLLHSCSS*WPLTLV
Trigger: CACTAAAGTCAAAGGCCATCAGCTGCTGCAGGAATG...AAGCAGGAGAATGGCGTGAACCCGGAGGGCGGAGGCTGCAGTGAGCTGAGGTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR GCA 90 bp TACGGAGTGCTCCACTGTGAACACCTGATAAGGCTGTTTGGTGCCAAAGCGAACCAGCCAGGGTGTGCGTaGGCTCCCGCCTCGTCGCTT +
Preference number: 4 (lower is better)
Translates to: YGVLHCEHLIRLFGAKANQPGCA*APASSL
Trigger: AAGCGACGAGGCGGGAGCGCACGCACACCCTGGCTG...GTTCGCTTTGGCACCAAACAGCCTTATCAGGTGTTCACAGTGGAGCACTCCGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS-3UTR CCA 90 bp GCTTCCCCACCAGGCTTCTGTCAATCACCACTTTCTCCAGCTGCGGCCCAGAAAGACTCCCGGCCGCTTTaGAGTAGGCGTCCCAGCAAA +
Preference number: 4 (lower is better)
Translates to: ASPPGFCQSPLSPAAAQKDSRPL*SRRPSK
Trigger: TTTGCTGGGACGCCTACTCCAAAGCGGCCGGGAGTC...TTTCTGGGCCGCAGCTGGAGAAAGTGGTGATTGACAGAAGCCTGGTGGGGAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417238.5
ENST00000418148.5
CDS-3UTR CCA 90 bp CGACCTCAGCTCACTGCAGCCTCCGCCCTCCGGGTTCACGCCATTCTCCTGCTTCCATGTTGTCTAGGATaGTCTCCATCTCCTGACCTC +
Preference number: 4 (lower is better)
Translates to: RPQLTAASALRVHAILLLPCCLG*SPSPDL
Trigger: GAGGTCAGGAGATGGAGACCATCCTAGACAACATGG...AAGCAGGAGAATGGCGTGAACCCGGAGGGCGGAGGCTGCAGTGAGCTGAGGTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR TCA 90 bp CGACCTCAGCTCACTGCAGCCTCCGCCCTCCGGGTTCACGCCATTCTCCTGCTTCAAACCTCTGGTACCTaGGCAAGTGATGGAAGAATC +
Preference number: 4 (lower is better)
Translates to: RPQLTAASALRVHAILLLQTSGT*ASDGRI
Trigger: GATTCTTCCATCACTTGCTCAGGTACCAGAGGTTTG...AAGCAGGAGAATGGCGTGAACCCGGAGGGCGGAGGCTGCAGTGAGCTGAGGTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR CCA 90 bp GGTGCGACCTCAGCTCACTGCAGCCTCCGCCCTCCGGGTTCACGCCATTCTCCTCAGAAGTGGTCTTGTTaGAGCATAGAAGGTTCCAAG +
Preference number: 4 (lower is better)
Translates to: GATSAHCSLRPPGSRHSPQKWSC*SIEGSK
Trigger: CTTGGAACCTTCTATGCTCCAACAAGACCACTTCTG...AGGAGAATGGCGTGAACCCGGAGGGCGGAGGCTGCAGTGAGCTGAGGTCGCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR CCA 90 bp TCTGAGATGAGCTTCCCCACCAGGCTTCTGTCAATCACCACTTTCTCCAGCTGCATCCTGTCTCGGGAGTaGGGAAGAAGCGCGACTCCC +
Preference number: 4 (lower is better)
Translates to: SEMSFPTRLLSITTFSSCILSRE*GRSATP
Trigger: GGGAGTCGCGCTTCTTCCCCACTCCCGAGACAGGAT...GCAGCTGGAGAAAGTGGTGATTGACAGAAGCCTGGTGGGGAAGCTCATCTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418148.5
CDS-3UTR CCA 90 bp GATGAGCTTCCCCACCAGGCTTCTGTCAATCACCACTTTCTCCAGCTGCGGCCCCCTTCTCAGAAGAAATaGGGGCCCAAGGCCAAGCAT +
Preference number: 4 (lower is better)
Translates to: DELPHQASVNHHFLQLRPPSQKK*GPKAKH
Trigger: ATGCTTGGCCTTGGGCCCCCATTTCTTCTGAGAAGG...GGGCCGCAGCTGGAGAAAGTGGTGATTGACAGAAGCCTGGTGGGGAAGCTCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS-3UTR CCA 90 bp GATGAGCTTCCCCACCAGGCTTCTGTCAATCACCACTTTCTCCAGCTGCGGCCCAAAGCGAACATCCAGTaGGTCCCATTCTGTGCGGAC +
Preference number: 4 (lower is better)
Translates to: DELPHQASVNHHFLQLRPKANIQ*VPFCAD
Trigger: GTCCGCACAGAATGGGACCCACTGGATGTTCGCTTT...GGGCCGCAGCTGGAGAAAGTGGTGATTGACAGAAGCCTGGTGGGGAAGCTCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS-3UTR TCA 90 bp GCTTCCCCACCAGGCTTCTGTCAATCACCACTTTCTCCAGCTGCGGCCCAGAAAATCACTGATGGTGTCTaGGATGAGCTTCCCCACCAG +
Preference number: 4 (lower is better)
Translates to: ASPPGFCQSPLSPAAAQKITDGV*DELPHQ
Trigger: CTGGTGGGGAAGCTCATCTCAGACACCATCAGTGAT...TTTCTGGGCCGCAGCTGGAGAAAGTGGTGATTGACAGAAGCCTGGTGGGGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000417238.5
ENST00000418148.5
CDS-3UTR TCA 90 bp GATGAGCTTCCCCACCAGGCTTCTGTCAATCACCACTTTCTCCAGCTGCGGCCCCAGGTCCTCACTCACTaGGCAAGTGATGGAAGAATC +
Preference number: 4 (lower is better)
Translates to: DELPHQASVNHHFLQLRPQVLTH*ASDGRI
Trigger: GATTCTTCCATCACTTGCTCAGTGAGTGAGGACCTG...GGGCCGCAGCTGGAGAAAGTGGTGATTGACAGAAGCCTGGTGGGGAAGCTCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS-3UTR GCA 90 bp CCTTTCTCCAGAGGGAAACAGTATCTGTGTTCTAAGGGGCAGTCAGGGCAAATTAAAGCAGCCAGGGTGTaGGTGCGCTCCCGCCTCGTC +
Preference number: 4 (lower is better)
Translates to: PFSRGKQYLCSKGQSGQIKAARV*VRSRLV
Trigger: GACGAGGCGGGAGCGCACGCACACCCTGGCTGCTTT...AATTTGCCCTGACTGCCCCTTAGAACACAGATACTGTTTCCCTCTGGAGAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR GCA 90 bp ATGAGCTTCCCCACCAGGCTTCTGTCAATCACCACTTTCTCCAGCTGCGGCCCAACTCCCCTTGGTTGCTaGCAACTAGCAGAATGGCAC +
Preference number: 4 (lower is better)
Translates to: MSFPTRLLSITTFSSCGPTPLGC*QLAEWH
Trigger: GTGCCATTCTGCTAGTTGGCAGCAACCAAGGGGAGT...TGGGCCGCAGCTGGAGAAAGTGGTGATTGACAGAAGCCTGGTGGGGAAGCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS-3UTR CCA 90 bp CCTTTCTCCAGAGGGAAACAGTATCTGTGTTCTAAGGGGCAGTCAGGGCAAATTGCTCGCTTGGTCTCTTaGGTCTCCAGGACGCCGCCG +
Preference number: 4 (lower is better)
Translates to: PFSRGKQYLCSKGQSGQIARLVS*VSRTPP
Trigger: CGGCGGCGTCCTGGAGACCCAAGAGACCAAGCGAGC...AATTTGCCCTGACTGCCCCTTAGAACACAGATACTGTTTCCCTCTGGAGAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR CCA 90 bp TGCATTCATAGATGCAGCTGTCAGCCATGGGCTCTTTGTCTACACTTACGGAGTGCTCGCTTGGTCTCTTaGGTCTCCAGGACGCCGCCG +
Preference number: 4 (lower is better)
Translates to: CIHRCSCQPWALCLHLRSARLVS*VSRTPP
Trigger: CGGCGGCGTCCTGGAGACCCAAGAGACCAAGCGAGC...ACTCCGTAAGTGTAGACAAAGAGCCCATGGCTGACAGCTGCATCTATGAATGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS-3UTR CCA 90 bp CCAAGCTTGCTGACAAGAAGCATGATGAGGTCATCAGCAGGGGACAGTCTGGAGTTTCTGTCTCGGGAGTaGGGAAGAAGCGCGACTCCC +
Preference number: 4 (lower is better)
Translates to: PSLLTRSMMRSSAGDSLEFLSRE*GRSATP
Trigger: GGGAGTCGCGCTTCTTCCCCACTCCCGAGACAGAAA...CTCCAGACTGTCCCCTGCTGATGACCTCATCATGCTTCTTGTCAGCAAGCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS-3UTR TCA 90 bp ATGAGCTTCCCCACCAGGCTTCTGTCAATCACCACTTTCTCCAGCTGCGGCCCACTGGGCGTCTGTTTTTaGGCGTCCAAGGATAATCTC +
Preference number: 4 (lower is better)
Translates to: MSFPTRLLSITTFSSCGPLGVCF*ASKDNL
Trigger: GAGATTATCCTTGGACGCTCAAAAACAGACGCCCAG...TGGGCCGCAGCTGGAGAAAGTGGTGATTGACAGAAGCCTGGTGGGGAAGCTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000417238.5
ENST00000418148.5
CDS-3UTR TCA 90 bp GCTTCCCCACCAGGCTTCTGTCAATCACCACTTTCTCCAGCTGCGGCCCAGAAAGCTCCTCCAACTCTTTaGGCGAGTCTCGGAGTTTTT +
Preference number: 4 (lower is better)
Translates to: ASPPGFCQSPLSPAAAQKAPPTL*ASLGVF
Trigger: AAAAACTCCGAGACTCGCTCAAAGAGTTGGAGGAGC...TTTCTGGGCCGCAGCTGGAGAAAGTGGTGATTGACAGAAGCCTGGTGGGGAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417238.5
ENST00000418148.5
CDS-3UTR TCA 90 bp TTCCCCACCAGGCTTCTGTCAATCACCACTTTCTCCAGCTGCGGCCCAGAAAGGGCTCCTCCAACTCTTTaGGCGAGTCTCGGAGTTTTT +
Preference number: 4 (lower is better)
Translates to: FPTRLLSITTFSSCGPERAPPTL*ASLGVF
Trigger: AAAAACTCCGAGACTCGCTCAAAGAGTTGGAGGAGC...CCTTTCTGGGCCGCAGCTGGAGAAAGTGGTGATTGACAGAAGCCTGGTGGGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417238.5
ENST00000418148.5
CDS-3UTR GCA 90 bp GTTCTAAGGGGCAGTCAGGGCAAATTACTCATAGCAGTAATTCGAGAGAACCATCAGCCAGGGTGTGCGTaGGCTCCCGCCTCGTCGCTT +
Preference number: 4 (lower is better)
Translates to: VLRGSQGKLLIAVIRENHQPGCA*APASSL
Trigger: AAGCGACGAGGCGGGAGCGCACGCACACCCTGGCTG...ATGGTTCTCTCGAATTACTGCTATGAGTAATTTGCCCTGACTGCCCCTTAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR CCA 90 bp CGACCTCAGCTCACTGCAGCCTCCGCCCTCCGGGTTCACGCCATTCTCCTGCTTGTGACTGACACACACTaGATTTTATTCCGAATGCAT +
Preference number: 4 (lower is better)
Translates to: RPQLTAASALRVHAILLLVTDTH*ILFRMH
Trigger: ATGCATTCGGAATAAAATCCAGTGTGTGTCAGTCAC...AAGCAGGAGAATGGCGTGAACCCGGAGGGCGGAGGCTGCAGTGAGCTGAGGTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR TCA 90 bp CGACCTCAGCTCACTGCAGCCTCCGCCCTCCGGGTTCACGCCATTCTCCTGCTTCTTATAATCCAAGGCTaGGAGTTTTTCCAGTCTTTT +
Preference number: 4 (lower is better)
Translates to: RPQLTAASALRVHAILLLLIIQG*EFFQSF
Trigger: AAAAGACTGGAAAAACTCTCAGCCTTGGATTATAAG...AAGCAGGAGAATGGCGTGAACCCGGAGGGCGGAGGCTGCAGTGAGCTGAGGTCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR TCA 90 bp TTCCCCACCAGGCTTCTGTCAATCACCACTTTCTCCAGCTGCGGCCCAGAAAGGGTTATGGTCTTTCCTTaGGCTCTGAGCTCTGCAGAT +
Preference number: 4 (lower is better)
Translates to: FPTRLLSITTFSSCGPERVMVFP*ALSSAD
Trigger: ATCTGCAGAGCTCAGAGCTCAAGGAAAGACCATAAC...CCTTTCTGGGCCGCAGCTGGAGAAAGTGGTGATTGACAGAAGCCTGGTGGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS-3UTR GCA 90 bp GCTTCCCCACCAGGCTTCTGTCAATCACCACTTTCTCCAGCTGCGGCCCAGAAAGATAAGGCTGTTTGGTaGCAAAGCGAACATCCAGTG +
Preference number: 4 (lower is better)
Translates to: ASPPGFCQSPLSPAAAQKDKAVW*QSEHPV
Trigger: CACTGGATGTTCGCTTTGGCACCAAACAGCCTTATC...TTTCTGGGCCGCAGCTGGAGAAAGTGGTGATTGACAGAAGCCTGGTGGGGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS-3UTR CCA 90 bp CTCAAGCAATTCTTCTGCCTCAGCTTCACAAGCATGTACCACCATGCCTGGCTAAGCGACACGCTCGCTTaGTCTCTTGGGTCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: LKQFFCLSFTSMYHHAWLSDTLA*SLGSPG
Trigger: TCCTGGAGACCCAAGAGACCAAGCGAGCGTGTCGCT...TAGCCAGGCATGGTGGTACATGCTTGTGAAGCTGAGGCAGAAGAATTGCTTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR TCA 90 bp TCTGAGATGAGCTTCCCCACCAGGCTTCTGTCAATCACCACTTTCTCCAGCTGCCTGGGCGTCTGTTTTTaGGCGTCCAAGGATAATCTC +
Preference number: 4 (lower is better)
Translates to: SEMSFPTRLLSITTFSSCLGVCF*ASKDNL
Trigger: GAGATTATCCTTGGACGCTCAAAAACAGACGCCCAG...GCAGCTGGAGAAAGTGGTGATTGACAGAAGCCTGGTGGGGAAGCTCATCTCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000417238.5
ENST00000418148.5
CDS-3UTR TCA 90 bp CTCAAGCAATTCTTCTGCCTCAGCTTCACAAGCATGTACCACCATGCCTGGCTAGCCAAGCATCATCGTTaGCCAGTGGCCACCAGCAAA +
Preference number: 4 (lower is better)
Translates to: LKQFFCLSFTSMYHHAWLAKHHR*PVATSK
Trigger: TTTGCTGGTGGCCACTGGTCAACGATGATGCTTGGC...TAGCCAGGCATGGTGGTACATGCTTGTGAAGCTGAGGCAGAAGAATTGCTTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272321.12
ENST00000409199.5
ENST00000409354.6
CDS-3UTR TCA 90 bp TCCAGAGGGAAACAGTATCTGTGTTCTAAGGGGCAGTCAGGGCAAATTACTCATCTGGGACTACAGGCATaGGCACTATGCCTGCCCCCT +
Preference number: 4 (lower is better)
Translates to: SRGKQYLCSKGQSGQITHLGLQA*ALCLPP
Trigger: AGGGGGCAGGCATAGTGCTCATGCCTGTAGTCCCAG...ATGAGTAATTTGCCCTGACTGCCCCTTAGAACACAGATACTGTTTCCCTCTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR TCA 90 bp TTTCCTGTTCTCTGCCGTCTTCTCTCAGTTCTCCGTCTTCTGCATTACAGGTATCTGGGACTACAGGCATaGGCACTATGCCTGCCCCCT +
Preference number: 4 (lower is better)
Translates to: FPVLCRLLSVLRLLHYRYLGLQA*ALCLPP
Trigger: AGGGGGCAGGCATAGTGCTCATGCCTGTAGTCCCAG...ATACCTGTAATGCAGAAGACGGAGAACTGAGAGAAGACGGCAGAGAACAGGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409354.6
CDS-3UTR TCA 90 bp TTCCCCACCAGGCTTCTGTCAATCACCACTTTCTCCAGCTGCGGCCCAGAAAGGAGACACCAGCACACCTaGCAGACATATTTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: FPTRLLSITTFSSCGPERRHQHT*QTYLFF
Trigger: GAAGAACAAATATGTCTGTCAGGTGTGCTGGTGTCT...CCTTTCTGGGCCGCAGCTGGAGAAAGTGGTGATTGACAGAAGCCTGGTGGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418148.5
CDS-3UTR GCA 90 bp TTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCCAAAAGCAGCCAGGGTGTaGGTGCGCTCCCGCCTCGTC +
Preference number: 4 (lower is better)
Translates to: LGIYPVMGWLGQMVFLVPKAARV*VRSRLV
Trigger: GACGAGGCGGGAGCGCACGCACACCCTGGCTGCTTT...TGGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS-3UTR GCA 90 bp GATGAGCTTCCCCACCAGGCTTCTGTCAATCACCACTTTCTCCAGCTGCGGCCCTTTTCTAAGTTACCATaGTCTGTCGCTGGTGGATCT +
Preference number: 4 (lower is better)
Translates to: DELPHQASVNHHFLQLRPFSKLP*SVAGGS
Trigger: AGATCCACCAGCGACAGAGCATGGTAACTTAGAAAA...GGGCCGCAGCTGGAGAAAGTGGTGATTGACAGAAGCCTGGTGGGGAAGCTCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417238.5
ENST00000418148.5
CDS-3UTR GCA 90 bp TACGGAGTGCTCCACTGTGAACACCTGATAAGGCTGTTTGGTGCCAAAGCGAACGTGGGTCCCATTCTGTaGGGACAGAACTCAGAACCT +
Preference number: 4 (lower is better)
Translates to: YGVLHCEHLIRLFGAKANVGPIL*GQNSEP
Trigger: AGGTTCTGAGTTCTGTCCGCACAGAATGGGACCCAC...GTTCGCTTTGGCACCAAACAGCCTTATCAGGTGTTCACAGTGGAGCACTCCGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS-3UTR GCA 90 bp CCAAGCTTGCTGACAAGAAGCATGATGAGGTCATCAGCAGGGGACAGTCTGGAGGCTTGTCTCAAGCTGTaGTTCTCTCTCTGGAGTGAG +
Preference number: 4 (lower is better)
Translates to: PSLLTRSMMRSSAGDSLEACLKL*FSLWSE
Trigger: CTCACTCCAGAGAGAGAAGCACAGCTTGAGACAAGC...CTCCAGACTGTCCCCTGCTGATGACCTCATCATGCTTCTTGTCAGCAAGCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS-3UTR GCA 90 bp CTCAAGCAATTCTTCTGCCTCAGCTTCACAAGCATGTACCACCATGCCTGGCTAAGGCGTGAGCCACCGTaGCTGGCCTATAGATGTCTA +
Preference number: 4 (lower is better)
Translates to: LKQFFCLSFTSMYHHAWLRREPP*LAYRCL
Trigger: TAGACATCTATAGGCCAGGCACGGTGGCTCACGCCT...TAGCCAGGCATGGTGGTACATGCTTGTGAAGCTGAGGCAGAAGAATTGCTTGAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR CCA 90 bp TCCAGAGGGAAACAGTATCTGTGTTCTAAGGGGCAGTCAGGGCAAATTACTCATATCCTGTCTCGGGAGTaGGGAAGAAGCGCGACTCCC +
Preference number: 4 (lower is better)
Translates to: SRGKQYLCSKGQSGQITHILSRE*GRSATP
Trigger: GGGAGTCGCGCTTCTTCCCCACTCCCGAGACAGGAT...ATGAGTAATTTGCCCTGACTGCCCCTTAGAACACAGATACTGTTTCCCTCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR CCA 90 bp ATGAGCTTCCCCACCAGGCTTCTGTCAATCACCACTTTCTCCAGCTGCGGCCCAACCATGCTCTGTCGCTaGTGGATCTTTCTTGTCATA +
Preference number: 4 (lower is better)
Translates to: MSFPTRLLSITTFSSCGPTMLCR*WIFLVI
Trigger: TATGACAAGAAAGATCCACCAGCGACAGAGCATGGT...TGGGCCGCAGCTGGAGAAAGTGGTGATTGACAGAAGCCTGGTGGGGAAGCTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417238.5
ENST00000418148.5
CDS-3UTR CCA 90 bp CTCAAGCAATTCTTCTGCCTCAGCTTCACAAGCATGTACCACCATGCCTGGCTATGCCAACTAGCAGAATaGCACCACTTGGGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: LKQFFCLSFTSMYHHAWLCQLAE*HHLGGS
Trigger: GCTGCCACCCAAGTGGTGCCATTCTGCTAGTTGGCA...TAGCCAGGCATGGTGGTACATGCTTGTGAAGCTGAGGCAGAAGAATTGCTTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272321.12
ENST00000409199.5
ENST00000409354.6
CDS-3UTR CCA 90 bp CTCAAGCAATTCTTCTGCCTCAGCTTCACAAGCATGTACCACCATGCCTGGCTACAGGTTAGAGTGCAGTaGCGCGATCACAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: LKQFFCLSFTSMYHHAWLQVRVQ*RDHSSL
Trigger: CAGTGAGCTGTGATCGCGCCACTGCACTCTAACCTG...TAGCCAGGCATGGTGGTACATGCTTGTGAAGCTGAGGCAGAAGAATTGCTTGAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272321.12
ENST00000409199.5
ENST00000409354.6
CDS-3UTR TCA 90 bp GGACAGATACTACCTAGCTGTTCCTGCCTATACCACTCTTCTTACTTTAGAGCTCGTCGCTTAGCAACCTaGGAAGCTGTCCGGTCGTCC +
Preference number: 4 (lower is better)
Translates to: GQILPSCSCLYHSSYFRARRLAT*EAVRSS
Trigger: GGACGACCGGACAGCTTCTCAGGTTGCTAAGCGACG...AGCTCTAAAGTAAGAAGAGTGGTATAGGCAGGAACAGCTAGGTAGTATCTGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR TCA 90 bp AGTCCTTGCCCATGCCTGTGTCCTGAATGGTATTGCCTAGGTTTTCTTCTAGGGATCACTGATGGTGTCTaGGATGAGCTTCCCCACCAG +
Preference number: 4 (lower is better)
Translates to: SPCPCLCPEWYCLGFLLGITDGV*DELPHQ
Trigger: CTGGTGGGGAAGCTCATCTCAGACACCATCAGTGAT...CCCTAGAAGAAAACCTAGGCAATACCATTCAGGACACAGGCATGGGCAAGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS-3UTR TCA 90 bp CTCAAGCAATTCTTCTGCCTCAGCTTCACAAGCATGTACCACCATGCCTGGCTACGGAGTGCTCCACTGTaGACACCTGATAAGGCTGTT +
Preference number: 4 (lower is better)
Translates to: LKQFFCLSFTSMYHHAWLRSAPL*TPDKAV
Trigger: AACAGCCTTATCAGGTGTTCACAGTGGAGCACTCCG...TAGCCAGGCATGGTGGTACATGCTTGTGAAGCTGAGGCAGAAGAATTGCTTGAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272321.12
ENST00000409199.5
ENST00000409354.6
CDS-3UTR GCA 90 bp CTCAAGCAATTCTTCTGCCTCAGCTTCACAAGCATGTACCACCATGCCTGGCTACACAGTTTCCTCAGGTaGTACAAAGCAGCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: LKQFFCLSFTSMYHHAWLHSFLR*YKAARV
Trigger: CACCCTGGCTGCTTTGTAGCACCTGAGGAAACTGTG...TAGCCAGGCATGGTGGTACATGCTTGTGAAGCTGAGGCAGAAGAATTGCTTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR GCA 90 bp TTCCCCACCAGGCTTCTGTCAATCACCACTTTCTCCAGCTGCGGCCCAGAAAGGTTCAAAGACCACAGGTaGAGTTCAGTCAAGCAGAAA +
Preference number: 4 (lower is better)
Translates to: FPTRLLSITTFSSCGPERFKDHR*SSVKQK
Trigger: TTTCTGCTTGACTGAACTGCACCTGTGGTCTTTGAA...CCTTTCTGGGCCGCAGCTGGAGAAAGTGGTGATTGACAGAAGCCTGGTGGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417238.5
ENST00000418148.5
CDS-3UTR GCA 90 bp GCTTCCCCACCAGGCTTCTGTCAATCACCACTTTCTCCAGCTGCGGCCCAGAAAGACTCTGCCAGCTTCTaGTTCTTTTCTAAGTTACCA +
Preference number: 4 (lower is better)
Translates to: ASPPGFCQSPLSPAAAQKDSASF*FFSKLP
Trigger: TGGTAACTTAGAAAAGAAGCAGAAGCTGGCAGAGTC...TTTCTGGGCCGCAGCTGGAGAAAGTGGTGATTGACAGAAGCCTGGTGGGGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417238.5
ENST00000418148.5
CDS-3UTR GCA 90 bp TCTGAGATGAGCTTCCCCACCAGGCTTCTGTCAATCACCACTTTCTCCAGCTGCACACACCGACTGTTTTaGATCAGCTCCTCCAACTCT +
Preference number: 4 (lower is better)
Translates to: SEMSFPTRLLSITTFSSCTHRLF*ISSSNS
Trigger: AGAGTTGGAGGAGCTGATGCAAAACAGTCGGTGTGT...GCAGCTGGAGAAAGTGGTGATTGACAGAAGCCTGGTGGGGAAGCTCATCTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417238.5
ENST00000418148.5
CDS-3UTR GCA 90 bp CTCAAGCAATTCTTCTGCCTCAGCTTCACAAGCATGTACCACCATGCCTGGCTAGTGGGTCCCATTCTGTaGGGACAGAACTCAGAACCT +
Preference number: 4 (lower is better)
Translates to: LKQFFCLSFTSMYHHAWLVGPIL*GQNSEP
Trigger: AGGTTCTGAGTTCTGTCCGCACAGAATGGGACCCAC...TAGCCAGGCATGGTGGTACATGCTTGTGAAGCTGAGGCAGAAGAATTGCTTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272321.12
ENST00000409199.5
ENST00000409354.6
CDS-3UTR GCA 90 bp CTCAAGCAATTCTTCTGCCTCAGCTTCACAAGCATGTACCACCATGCCTGGCTAACTCCCCTTGGTTGCTaGCAACTAGCAGAATGGCAC +
Preference number: 4 (lower is better)
Translates to: LKQFFCLSFTSMYHHAWLTPLGC*QLAEWH
Trigger: GTGCCATTCTGCTAGTTGGCAGCAACCAAGGGGAGT...TAGCCAGGCATGGTGGTACATGCTTGTGAAGCTGAGGCAGAAGAATTGCTTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272321.12
ENST00000409199.5
ENST00000409354.6
CDS-3UTR GCA 90 bp CTCAAGCAATTCTTCTGCCTCAGCTTCACAAGCATGTACCACCATGCCTGGCTAGCAACTCCCCTTGGTTaGTGCCAACTAGCAGAATGG +
Preference number: 4 (lower is better)
Translates to: LKQFFCLSFTSMYHHAWLATPLG*CQLAEW
Trigger: CCATTCTGCTAGTTGGCAGCAACCAAGGGGAGTTGC...TAGCCAGGCATGGTGGTACATGCTTGTGAAGCTGAGGCAGAAGAATTGCTTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272321.12
ENST00000409199.5
ENST00000409354.6
CDS-3UTR GCA 90 bp AAATTTGCAACTCCCCTTGGTTGCTGCCAACTAGCAGAATGGCACCACTTGGGTGCAACTCCCCTTGGTTaGTGCCAACTAGCAGAATGG +
Preference number: 4 (lower is better)
Translates to: KFATPLGCCQLAEWHHLGATPLG*CQLAEW
Trigger: CCATTCTGCTAGTTGGCAGCAACCAAGGGGAGTTGC...ACCCAAGTGGTGCCATTCTGCTAGTTGGCAGCAACCAAGGGGAGTTGCAAATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS-3UTR GCA 90 bp ACACCTGATAAGGCTGTTTGGTGCCAAAGCGAACATCCAGTGGGTCCCATTCTGGGAGTATGGTGGGTCTaGAGATGCAGTTCACTCTCT +
Preference number: 4 (lower is better)
Translates to: TPDKAVWCQSEHPVGPILGVWWV*RCSSLS
Trigger: AGAGAGTGAACTGCATCTGCAGACCCACCATACTCC...CAGAATGGGACCCACTGGATGTTCGCTTTGGCACCAAACAGCCTTATCAGGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS-3UTR CCA 90 bp GTGCCATGGTGGTGTGCTGCACCCATTAACTCGTCATTTAGCATTAGGTATATCAGCGACACGCTCGCTTaGTCTCTTGGGTCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: VPWWCAAPINSSFSIRYISDTLA*SLGSPG
Trigger: TCCTGGAGACCCAAGAGACCAAGCGAGCGTGTCGCT...GATATACCTAATGCTAAATGACGAGTTAATGGGTGCAGCACACCACCATGGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS-3UTR CCA 90 bp GTTCTAAGGGGCAGTCAGGGCAAATTACTCATAGCAGTAATTCGAGAGAACCATGACTCCCGGCCGCTTTaGAGTAGGCGTCCCAGCAAA +
Preference number: 4 (lower is better)
Translates to: VLRGSQGKLLIAVIRENHDSRPL*SRRPSK
Trigger: TTTGCTGGGACGCCTACTCCAAAGCGGCCGGGAGTC...ATGGTTCTCTCGAATTACTGCTATGAGTAATTTGCCCTGACTGCCCCTTAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR CCA 90 bp AATGGTATTTCTAGTTCCAGATCCCTGAGGAATCGCCACACTGACTTCCACAATATCCTGTCTCGGGAGTaGGGAAGAAGCGCGACTCCC +
Preference number: 4 (lower is better)
Translates to: NGISSSRSLRNRHTDFHNILSRE*GRSATP
Trigger: GGGAGTCGCGCTTCTTCCCCACTCCCGAGACAGGAT...ATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTGGAACTAGAAATACCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS-3UTR CCA 90 bp TCTGAGATGAGCTTCCCCACCAGGCTTCTGTCAATCACCACTTTCTCCAGCTGCGTCTCGGAGTTTTTCTaGGCGTCTGTTTTTGAGCGT +
Preference number: 4 (lower is better)
Translates to: SEMSFPTRLLSITTFSSCVSEFF*ASVFER
Trigger: ACGCTCAAAAACAGACGCCCAGAAAAACTCCGAGAC...GCAGCTGGAGAAAGTGGTGATTGACAGAAGCCTGGTGGGGAAGCTCATCTCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000417238.5
ENST00000418148.5
CDS-3UTR CCA 90 bp CTCAAGCAATTCTTCTGCCTCAGCTTCACAAGCATGTACCACCATGCCTGGCTACCTTCTCAGAAGAAATaGGGGCCCAAGGCCAAGCAT +
Preference number: 4 (lower is better)
Translates to: LKQFFCLSFTSMYHHAWLPSQKK*GPKAKH
Trigger: ATGCTTGGCCTTGGGCCCCCATTTCTTCTGAGAAGG...TAGCCAGGCATGGTGGTACATGCTTGTGAAGCTGAGGCAGAAGAATTGCTTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272321.12
ENST00000409199.5
ENST00000409354.6
CDS-3UTR CCA 90 bp CTCAAGCAATTCTTCTGCCTCAGCTTCACAAGCATGTACCACCATGCCTGGCTAAAAGCGAACATCCAGTaGGTCCCATTCTGTGCGGAC +
Preference number: 4 (lower is better)
Translates to: LKQFFCLSFTSMYHHAWLKANIQ*VPFCAD
Trigger: GTCCGCACAGAATGGGACCCACTGGATGTTCGCTTT...TAGCCAGGCATGGTGGTACATGCTTGTGAAGCTGAGGCAGAAGAATTGCTTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272321.12
ENST00000409199.5
ENST00000409354.6
CDS-3UTR CCA 90 bp GTGAACCTGTCAGTGCTAGGACAGATACTACCTAGCTGTTCCTGCCTATACCACATTGCAGAGTCTCCCTaGGTAAGCGGTCTTCAGCCA +
Preference number: 4 (lower is better)
Translates to: VNLSVLGQILPSCSCLYHIAESP*VSGLQP
Trigger: TGGCTGAAGACCGCTTACCCAGGGAGACTCTGCAAT...GTGGTATAGGCAGGAACAGCTAGGTAGTATCTGTCCTAGCACTGACAGGTTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR CCA 90 bp CTCAAGCAATTCTTCTGCCTCAGCTTCACAAGCATGTACCACCATGCCTGGCTAATTGCAGAGTCTCCCTaGGTAAGCGGTCTTCAGCCA +
Preference number: 4 (lower is better)
Translates to: LKQFFCLSFTSMYHHAWLIAESP*VSGLQP
Trigger: TGGCTGAAGACCGCTTACCCAGGGAGACTCTGCAAT...TAGCCAGGCATGGTGGTACATGCTTGTGAAGCTGAGGCAGAAGAATTGCTTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272321.12
ENST00000409199.5
ENST00000409354.6
CDS-3UTR CCA 90 bp CTCAAGCAATTCTTCTGCCTCAGCTTCACAAGCATGTACCACCATGCCTGGCTACTGATAAAGCACTGGTaGCCCAGAGTGTCCCAGTTC +
Preference number: 4 (lower is better)
Translates to: LKQFFCLSFTSMYHHAWLLIKHW*PRVSQF
Trigger: GAACTGGGACACTCTGGGCCACCAGTGCTTTATCAG...TAGCCAGGCATGGTGGTACATGCTTGTGAAGCTGAGGCAGAAGAATTGCTTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272321.12
ENST00000409199.5
ENST00000409354.6
CDS-3UTR CCA 90 bp CTCAAGCAATTCTTCTGCCTCAGCTTCACAAGCATGTACCACCATGCCTGGCTAATGCTGATAAAGCACTaGTGGCCCAGAGTGTCCCAG +
Preference number: 4 (lower is better)
Translates to: LKQFFCLSFTSMYHHAWLMLIKH*WPRVSQ
Trigger: CTGGGACACTCTGGGCCACCAGTGCTTTATCAGCAT...TAGCCAGGCATGGTGGTACATGCTTGTGAAGCTGAGGCAGAAGAATTGCTTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272321.12
ENST00000409199.5
ENST00000409354.6
CDS-3UTR CCA 90 bp GATGAGCTTCCCCACCAGGCTTCTGTCAATCACCACTTTCTCCAGCTGCGGCCCTTCTGTCTAAGAAGATaGTTTACAATGGCGCTCATG +
Preference number: 4 (lower is better)
Translates to: DELPHQASVNHHFLQLRPFCLRR*FTMALM
Trigger: CATGAGCGCCATTGTAAACCATCTTCTTAGACAGAA...GGGCCGCAGCTGGAGAAAGTGGTGATTGACAGAAGCCTGGTGGGGAAGCTCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS-3UTR CCA 90 bp GATTTCCTGTTCTCTGCCGTCTTCTCTCAGTTCTCCGTCTTCTGCATTACAGGTCAGGTTAGAGTGCAGTaGCGCGATCACAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: DFLFSAVFSQFSVFCITGQVRVQ*RDHSSL
Trigger: CAGTGAGCTGTGATCGCGCCACTGCACTCTAACCTG...ACCTGTAATGCAGAAGACGGAGAACTGAGAGAAGACGGCAGAGAACAGGAAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409354.6
CDS-3UTR TCA 90 bp TTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCCACGTCGCTTAGCAACCTaGGAAGCTGTCCGGTCGTCC +
Preference number: 4 (lower is better)
Translates to: LGIYPVMGWLGQMVFLVPRRLAT*EAVRSS
Trigger: GGACGACCGGACAGCTTCTCAGGTTGCTAAGCGACG...TGGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS-3UTR TCA 90 bp CTGATGGCCTTTGACTTTAGTGGTATTCTGGTGACTGACACACACTGGATTTTACGTCGCTTAGCAACCTaGGAAGCTGTCCGGTCGTCC +
Preference number: 4 (lower is better)
Translates to: LMAFDFSGILVTDTHWILRRLAT*EAVRSS
Trigger: GGACGACCGGACAGCTTCTCAGGTTGCTAAGCGACG...TAAAATCCAGTGTGTGTCAGTCACCAGAATACCACTAAAGTCAAAGGCCATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS-3UTR TCA 90 bp CTCAAGCAATTCTTCTGCCTCAGCTTCACAAGCATGTACCACCATGCCTGGCTACCAAGGATAATCTCGTaGCTCTGCCAGCTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: LKQFFCLSFTSMYHHAWLPRIIS*LCQLLL
Trigger: AAGCAGAAGCTGGCAGAGTCACGAGATTATCCTTGG...TAGCCAGGCATGGTGGTACATGCTTGTGAAGCTGAGGCAGAAGAATTGCTTGAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR TCA 90 bp GCTTCCCCACCAGGCTTCTGTCAATCACCACTTTCTCCAGCTGCGGCCCAGAAAGAACCAAAAAGGAGCTaGCAGACATATTTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: ASPPGFCQSPLSPAAAQKEPKRS*QTYLFF
Trigger: GAAGAACAAATATGTCTGTCAGCTCCTTTTTGGTTC...TTTCTGGGCCGCAGCTGGAGAAAGTGGTGATTGACAGAAGCCTGGTGGGGAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS-3UTR TCA 90 bp CCTTTCTCCAGAGGGAAACAGTATCTGTGTTCTAAGGGGCAGTCAGGGCAAATTATCACTGATGGTGTCTaGGATGAGCTTCCCCACCAG +
Preference number: 4 (lower is better)
Translates to: PFSRGKQYLCSKGQSGQIITDGV*DELPHQ
Trigger: CTGGTGGGGAAGCTCATCTCAGACACCATCAGTGAT...AATTTGCCCTGACTGCCCCTTAGAACACAGATACTGTTTCCCTCTGGAGAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR TCA 90 bp GCTTGTCTCAAGCTGTGCTTCTCTCTCTGGAGTGAGCTTCTGTCTAAGAAGATGATCACTGATGGTGTCTaGGATGAGCTTCCCCACCAG +
Preference number: 4 (lower is better)
Translates to: ACLKLCFSLWSELLSKKMITDGV*DELPHQ
Trigger: CTGGTGGGGAAGCTCATCTCAGACACCATCAGTGAT...CATCTTCTTAGACAGAAGCTCACTCCAGAGAGAGAAGCACAGCTTGAGACAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS-3UTR TCA 90 bp TTTCCTGTTCTCTGCCGTCTTCTCTCAGTTCTCCGTCTTCTGCATTACAGGTATGCCAAGCATCATCGTTaGCCAGTGGCCACCAGCAAA +
Preference number: 4 (lower is better)
Translates to: FPVLCRLLSVLRLLHYRYAKHHR*PVATSK
Trigger: TTTGCTGGTGGCCACTGGTCAACGATGATGCTTGGC...ATACCTGTAATGCAGAAGACGGAGAACTGAGAGAAGACGGCAGAGAACAGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409354.6
CDS-3UTR TCA 90 bp CTCAAGCAATTCTTCTGCCTCAGCTTCACAAGCATGTACCACCATGCCTGGCTACATTCCTGCAGCAGCTaGTGGCCTTTGACTTTAGTG +
Preference number: 4 (lower is better)
Translates to: LKQFFCLSFTSMYHHAWLHSCSS*WPLTLV
Trigger: CACTAAAGTCAAAGGCCATCAGCTGCTGCAGGAATG...TAGCCAGGCATGGTGGTACATGCTTGTGAAGCTGAGGCAGAAGAATTGCTTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272321.12
ENST00000409199.5
ENST00000409354.6
CDS-3UTR TCA 90 bp TACGGAGTGCTCCACTGTGAACACCTGATAAGGCTGTTTGGTGCCAAAGCGAACGAATGTACTGGAAGATaGTGTCTATCAGGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: YGVLHCEHLIRLFGAKANECTGR*CLSGPA
Trigger: AGCTGGGCCTGATAGACATCATCTTCCAGTACATTC...GTTCGCTTTGGCACCAAACAGCCTTATCAGGTGTTCACAGTGGAGCACTCCGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS-3UTR TCA 90 bp AGTCCTTGCCCATGCCTGTGTCCTGAATGGTATTGCCTAGGTTTTCTTCTAGGGCCCATGCCTGTGTCCTaGATGGTATTGCCTAGGTTT +
Preference number: 4 (lower is better)
Translates to: SPCPCLCPEWYCLGFLLGPMPVS*MVLPRF
Trigger: AAACCTAGGCAATACCATTCAGGACACAGGCATGGG...CCCTAGAAGAAAACCTAGGCAATACCATTCAGGACACAGGCATGGGCAAGGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS-3UTR TCA 90 bp GTGCCATGGTGGTGTGCTGCACCCATTAACTCGTCATTTAGCATTAGGTATATCACAGTCCCCGGTGTGTaGTGTTCCCCTTCTTGTGTC +
Preference number: 4 (lower is better)
Translates to: VPWWCAAPINSSFSIRYITVPGV*CSPSCV
Trigger: GACACAAGAAGGGGAACATCACACACCGGGGACTGT...GATATACCTAATGCTAAATGACGAGTTAATGGGTGCAGCACACCACCATGGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS-3UTR GCA 90 bp TCCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGACAGCCAGGGTGTGCGTaGGCTCCCGCCTCGTCGCTT +
Preference number: 4 (lower is better)
Translates to: STLMVVSFAVQKLFSLIRQPGCA*APASSL
Trigger: AAGCGACGAGGCGGGAGCGCACGCACACCCTGGCTG...TCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS-3UTR GCA 90 bp GATTTCCTGTTCTCTGCCGTCTTCTCTCAGTTCTCCGTCTTCTGCATTACAGGTACTCCCCTTGGTTGCTaGCAACTAGCAGAATGGCAC +
Preference number: 4 (lower is better)
Translates to: DFLFSAVFSQFSVFCITGTPLGC*QLAEWH
Trigger: GTGCCATTCTGCTAGTTGGCAGCAACCAAGGGGAGT...ACCTGTAATGCAGAAGACGGAGAACTGAGAGAAGACGGCAGAGAACAGGAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409354.6
CDS-3UTR GCA 90 bp CCAAGCTTGCTGACAAGAAGCATGATGAGGTCATCAGCAGGGGACAGTCTGGAGGAGTGTCCCAGTTCATaGTGCTCAGGATGTTTATTG +
Preference number: 4 (lower is better)
Translates to: PSLLTRSMMRSSAGDSLEECPSS*CSGCLL
Trigger: CAATAAACATCCTGAGCAGCATGAACTGGGACACTC...CTCCAGACTGTCCCCTGCTGATGACCTCATCATGCTTCTTGTCAGCAAGCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS-3UTR GCA 90 bp CTCAAGCAATTCTTCTGCCTCAGCTTCACAAGCATGTACCACCATGCCTGGCTAGCTTGTCTCAAGCTGTaGTTCTCTCTCTGGAGTGAG +
Preference number: 4 (lower is better)
Translates to: LKQFFCLSFTSMYHHAWLACLKL*FSLWSE
Trigger: CTCACTCCAGAGAGAGAAGCACAGCTTGAGACAAGC...TAGCCAGGCATGGTGGTACATGCTTGTGAAGCTGAGGCAGAAGAATTGCTTGAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272321.12
ENST00000409199.5
ENST00000409354.6
CDS-3UTR GCA 90 bp GATTTCCTGTTCTCTGCCGTCTTCTCTCAGTTCTCCGTCTTCTGCATTACAGGTCATGAGCACTATGCCTaGCCCCTACTGCCCCTTTTT +
Preference number: 4 (lower is better)
Translates to: DFLFSAVFSQFSVFCITGHEHYA*PLLPLF
Trigger: AAAAAGGGGCAGTAGGGGGCAGGCATAGTGCTCATG...ACCTGTAATGCAGAAGACGGAGAACTGAGAGAAGACGGCAGAGAACAGGAAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409354.6
CDS-3UTR GCA 90 bp GTGAACCTGTCAGTGCTAGGACAGATACTACCTAGCTGTTCCTGCCTATACCACTTCACGCCATTCTCCTaGTTCAGCCTCCCAAGTAGT +
Preference number: 4 (lower is better)
Translates to: VNLSVLGQILPSCSCLYHFTPFS*FSLPSS
Trigger: ACTACTTGGGAGGCTGAAGCAGGAGAATGGCGTGAA...GTGGTATAGGCAGGAACAGCTAGGTAGTATCTGTCCTAGCACTGACAGGTTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR GCA 90 bp TCTGAGATGAGCTTCCCCACCAGGCTTCTGTCAATCACCACTTTCTCCAGCTGCCTTTCAGTTTATGCCTaGTATGGTCACTCTCCAGTG +
Preference number: 4 (lower is better)
Translates to: SEMSFPTRLLSITTFSSCLSVYA*YGHSPV
Trigger: CACTGGAGAGTGACCATAGCAGGCATAAACTGAAAG...GCAGCTGGAGAAAGTGGTGATTGACAGAAGCCTGGTGGGGAAGCTCATCTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS-3UTR CCA 90 bp TTCCCCACCAGGCTTCTGTCAATCACCACTTTCTCCAGCTGCGGCCCAGAAAGGATGCTCTGTCGCTGGTaGATCTTTCTTGTCATAATA +
Preference number: 4 (lower is better)
Translates to: FPTRLLSITTFSSCGPERMLCRW*IFLVII
Trigger: TATTATGACAAGAAAGATCCACCAGCGACAGAGCAT...CCTTTCTGGGCCGCAGCTGGAGAAAGTGGTGATTGACAGAAGCCTGGTGGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417238.5
ENST00000418148.5
CDS-3UTR CCA 90 bp CCTTTCTCCAGAGGGAAACAGTATCTGTGTTCTAAGGGGCAGTCAGGGCAAATTCCTTCTCAGAAGAAATaGGGGCCCAAGGCCAAGCAT +
Preference number: 4 (lower is better)
Translates to: PFSRGKQYLCSKGQSGQIPSQKK*GPKAKH
Trigger: ATGCTTGGCCTTGGGCCCCCATTTCTTCTGAGAAGG...AATTTGCCCTGACTGCCCCTTAGAACACAGATACTGTTTCCCTCTGGAGAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR CCA 90 bp CTCAAGCAATTCTTCTGCCTCAGCTTCACAAGCATGTACCACCATGCCTGGCTACCAGGAGGAGTAGATTaGCTCTGTCCTTCTCAGAAG +
Preference number: 4 (lower is better)
Translates to: LKQFFCLSFTSMYHHAWLPGGVD*LCPSQK
Trigger: CTTCTGAGAAGGACAGAGCCAATCTACTCCTCCTGG...TAGCCAGGCATGGTGGTACATGCTTGTGAAGCTGAGGCAGAAGAATTGCTTGAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272321.12
ENST00000409199.5
ENST00000409354.6
CDS-3UTR CCA 90 bp GATTTCCTGTTCTCTGCCGTCTTCTCTCAGTTCTCCGTCTTCTGCATTACAGGTAAAGCGAACATCCAGTaGGTCCCATTCTGTGCGGAC +
Preference number: 4 (lower is better)
Translates to: DFLFSAVFSQFSVFCITGKANIQ*VPFCAD
Trigger: GTCCGCACAGAATGGGACCCACTGGATGTTCGCTTT...ACCTGTAATGCAGAAGACGGAGAACTGAGAGAAGACGGCAGAGAACAGGAAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409354.6
CDS-3UTR CCA 90 bp TTTCCTGTTCTCTGCCGTCTTCTCTCAGTTCTCCGTCTTCTGCATTACAGGTATTGCCAACTAGCAGAATaGCACCACTTGGGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: FPVLCRLLSVLRLLHYRYCQLAE*HHLGGS
Trigger: GCTGCCACCCAAGTGGTGCCATTCTGCTAGTTGGCA...ATACCTGTAATGCAGAAGACGGAGAACTGAGAGAAGACGGCAGAGAACAGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409354.6
CDS-3UTR CCA 90 bp CAACAGCACACCCAAAGGTCCTCTTTCAAACCTGAGGAAGAGGAGATCATAGATTGCCAACTAGCAGAATaGCACCACTTGGGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: QQHTQRSSFKPEEEEIIDCQLAE*HHLGGS
Trigger: GCTGCCACCCAAGTGGTGCCATTCTGCTAGTTGGCA...ATCTATGATCTCCTCTTCCTCAGGTTTGAAAGAGGACCTTTGGGTGTGCTGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS-3UTR CCA 90 bp CCTTTCTCCAGAGGGAAACAGTATCTGTGTTCTAAGGGGCAGTCAGGGCAAATTCTGATAAAGCACTGGTaGCCCAGAGTGTCCCAGTTC +
Preference number: 4 (lower is better)
Translates to: PFSRGKQYLCSKGQSGQILIKHW*PRVSQF
Trigger: GAACTGGGACACTCTGGGCCACCAGTGCTTTATCAG...AATTTGCCCTGACTGCCCCTTAGAACACAGATACTGTTTCCCTCTGGAGAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR CCA 90 bp GATTTCCTGTTCTCTGCCGTCTTCTCTCAGTTCTCCGTCTTCTGCATTACAGGTATGCTGATAAAGCACTaGTGGCCCAGAGTGTCCCAG +
Preference number: 4 (lower is better)
Translates to: DFLFSAVFSQFSVFCITGMLIKH*WPRVSQ
Trigger: CTGGGACACTCTGGGCCACCAGTGCTTTATCAGCAT...ACCTGTAATGCAGAAGACGGAGAACTGAGAGAAGACGGCAGAGAACAGGAAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409354.6
CDS-3UTR CCA 90 bp CCTTTCTCCAGAGGGAAACAGTATCTGTGTTCTAAGGGGCAGTCAGGGCAAATTGTGATCCTTCAGCCTTaGCCTCCTAAAGCACTGGGA +
Preference number: 4 (lower is better)
Translates to: PFSRGKQYLCSKGQSGQIVILQP*PPKALG
Trigger: TCCCAGTGCTTTAGGAGGCCAAGGCTGAAGGATCAC...AATTTGCCCTGACTGCCCCTTAGAACACAGATACTGTTTCCCTCTGGAGAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR CCA 90 bp GATTTCCTGTTCTCTGCCGTCTTCTCTCAGTTCTCCGTCTTCTGCATTACAGGTGTGATCCTTCAGCCTTaGCCTCCTAAAGCACTGGGA +
Preference number: 4 (lower is better)
Translates to: DFLFSAVFSQFSVFCITGVILQP*PPKALG
Trigger: TCCCAGTGCTTTAGGAGGCCAAGGCTGAAGGATCAC...ACCTGTAATGCAGAAGACGGAGAACTGAGAGAAGACGGCAGAGAACAGGAAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409354.6
CDS-3UTR CCA 90 bp GCTTCCCCACCAGGCTTCTGTCAATCACCACTTTCTCCAGCTGCGGCCCAGAAAATCCAAGTTTCCATCTaGTATCATTTCCTTTCAGCC +
Preference number: 4 (lower is better)
Translates to: ASPPGFCQSPLSPAAAQKIQVSI*YHFLSA
Trigger: GGCTGAAAGGAAATGATACCAGATGGAAACTTGGAT...TTTCTGGGCCGCAGCTGGAGAAAGTGGTGATTGACAGAAGCCTGGTGGGGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS-3UTR CCA 90 bp AAATTTGCAACTCCCCTTGGTTGCTGCCAACTAGCAGAATGGCACCACTTGGGTCAGCAGGGGACAGTCTaGAGTTTGAGGTCAACAACT +
Preference number: 4 (lower is better)
Translates to: KFATPLGCCQLAEWHHLGQQGTV*SLRSTT
Trigger: AGTTGTTGACCTCAAACTCCAGACTGTCCCCTGCTG...ACCCAAGTGGTGCCATTCTGCTAGTTGGCAGCAACCAAGGGGAGTTGCAAATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417238.5
3UTR CAA 72 bp CCCCTTGGTTGCTGCCAACTAGCAGAATGGCACCACTaGGGTGGCAGCTTATTAATGAAGGCAAAAGTTCAG +
Preference number: 4 (lower is better)
Translates to: PLGCCQLAEWHH*GGSLLMKAKVQ
Trigger: CTGAACTTTTGCCTTCATTAATAAGCTGCCACCCAAGTGGTGCCATTCTGCTAGTTGGCAGCAACCAAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS-3UTR TCA 90 bp CCTTTCTCCAGAGGGAAACAGTATCTGTGTTCTAAGGGGCAGTCAGGGCAAATTAGACACCAGCACACCTaGACCAAAAAGGAGCTGACA +
Preference number: 4 (lower is better)
Translates to: PFSRGKQYLCSKGQSGQIRHQHT*TKKELT
Trigger: TGTCAGCTCCTTTTTGGTTCAGGTGTGCTGGTGTCT...AATTTGCCCTGACTGCCCCTTAGAACACAGATACTGTTTCCCTCTGGAGAAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR TCA 90 bp GTTCTAAGGGGCAGTCAGGGCAAATTACTCATAGCAGTAATTCGAGAGAACCATGCCAAGCATCATCGTTaGCCAGTGGCCACCAGCAAA +
Preference number: 4 (lower is better)
Translates to: VLRGSQGKLLIAVIRENHAKHHR*PVATSK
Trigger: TTTGCTGGTGGCCACTGGTCAACGATGATGCTTGGC...ATGGTTCTCTCGAATTACTGCTATGAGTAATTTGCCCTGACTGCCCCTTAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR TCA 90 bp GTATACATGTGCCATGGTGGTGTGCTGCACCCATTAACTCGTCATTTAGCATTAGCCAAGCATCATCGTTaGCCAGTGGCCACCAGCAAA +
Preference number: 4 (lower is better)
Translates to: VYMCHGGVLHPLTRHLALAKHHR*PVATSK
Trigger: TTTGCTGGTGGCCACTGGTCAACGATGATGCTTGGC...TAATGCTAAATGACGAGTTAATGGGTGCAGCACACCACCATGGCACATGTATAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS-3UTR TCA 90 bp TTTCCTGTTCTCTGCCGTCTTCTCTCAGTTCTCCGTCTTCTGCATTACAGGTATCGGAGTGCTCCACTGTaGACACCTGATAAGGCTGTT +
Preference number: 4 (lower is better)
Translates to: FPVLCRLLSVLRLLHYRYRSAPL*TPDKAV
Trigger: AACAGCCTTATCAGGTGTTCACAGTGGAGCACTCCG...ATACCTGTAATGCAGAAGACGGAGAACTGAGAGAAGACGGCAGAGAACAGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409354.6
CDS-3UTR TCA 90 bp CAACAGCACACCCAAAGGTCCTCTTTCAAACCTGAGGAAGAGGAGATCATAGATCGGAGTGCTCCACTGTaGACACCTGATAAGGCTGTT +
Preference number: 4 (lower is better)
Translates to: QQHTQRSSFKPEEEEIIDRSAPL*TPDKAV
Trigger: AACAGCCTTATCAGGTGTTCACAGTGGAGCACTCCG...ATCTATGATCTCCTCTTCCTCAGGTTTGAAAGAGGACCTTTGGGTGTGCTGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS-3UTR TCA 90 bp GATTTCCTGTTCTCTGCCGTCTTCTCTCAGTTCTCCGTCTTCTGCATTACAGGTCATTCCTGCAGCAGCTaGTGGCCTTTGACTTTAGTG +
Preference number: 4 (lower is better)
Translates to: DFLFSAVFSQFSVFCITGHSCSS*WPLTLV
Trigger: CACTAAAGTCAAAGGCCATCAGCTGCTGCAGGAATG...ACCTGTAATGCAGAAGACGGAGAACTGAGAGAAGACGGCAGAGAACAGGAAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409354.6
CDS-3UTR TCA 90 bp CTCAAGCAATTCTTCTGCCTCAGCTTCACAAGCATGTACCACCATGCCTGGCTAGCTATCCATTGCATTTaGACAAGACTGCTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: LKQFFCLSFTSMYHHAWLAIHCI*TRLLEA
Trigger: TGCCTCCAGCAGTCTTGTTCAAATGCAATGGATAGC...TAGCCAGGCATGGTGGTACATGCTTGTGAAGCTGAGGCAGAAGAATTGCTTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272321.12
ENST00000409199.5
ENST00000409354.6
CDS-3UTR TCA 90 bp ACACCTGATAAGGCTGTTTGGTGCCAAAGCGAACATCCAGTGGGTCCCATTCTGGTCCTCTTTCAAACCTaGGGAAGAGGAGATCATAGA +
Preference number: 4 (lower is better)
Translates to: TPDKAVWCQSEHPVGPILVLFQT*GRGDHR
Trigger: TCTATGATCTCCTCTTCCTCAGGTTTGAAAGAGGAC...CAGAATGGGACCCACTGGATGTTCGCTTTGGCACCAAACAGCCTTATCAGGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS-3UTR TCA 90 bp CTCAAGCAATTCTTCTGCCTCAGCTTCACAAGCATGTACCACCATGCCTGGCTAGAATGTACTGGAAGATaGTGTCTATCAGGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: LKQFFCLSFTSMYHHAWLECTGR*CLSGPA
Trigger: AGCTGGGCCTGATAGACATCATCTTCCAGTACATTC...TAGCCAGGCATGGTGGTACATGCTTGTGAAGCTGAGGCAGAAGAATTGCTTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272321.12
ENST00000409199.5
ENST00000409354.6
CDS-3UTR TCA 90 bp CTCAAGCAATTCTTCTGCCTCAGCTTCACAAGCATGTACCACCATGCCTGGCTACAAACCTCTGGTACCTaGGCAAGTGATGGAAGAATC +
Preference number: 4 (lower is better)
Translates to: LKQFFCLSFTSMYHHAWLQTSGT*ASDGRI
Trigger: GATTCTTCCATCACTTGCTCAGGTACCAGAGGTTTG...TAGCCAGGCATGGTGGTACATGCTTGTGAAGCTGAGGCAGAAGAATTGCTTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272321.12
ENST00000409199.5
ENST00000409354.6
CDS-3UTR TCA 90 bp CTCAAGCAATTCTTCTGCCTCAGCTTCACAAGCATGTACCACCATGCCTGGCTAGAGGTTATCTGGAAATaGGTCTTCTCCTTGAGGTGC +
Preference number: 4 (lower is better)
Translates to: LKQFFCLSFTSMYHHAWLEVIWK*VFSLRC
Trigger: GCACCTCAAGGAGAAGACTCATTTCCAGATAACCTC...TAGCCAGGCATGGTGGTACATGCTTGTGAAGCTGAGGCAGAAGAATTGCTTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272321.12
ENST00000409199.5
ENST00000409354.6
CDS-3UTR TCA 90 bp CTCAAGCAATTCTTCTGCCTCAGCTTCACAAGCATGTACCACCATGCCTGGCTAGAGAAGAGCTGGAGCTaGGACAATTTTAGAGAGCCA +
Preference number: 4 (lower is better)
Translates to: LKQFFCLSFTSMYHHAWLEKSWS*DNFREP
Trigger: TGGCTCTCTAAAATTGTCTCAGCTCCAGCTCTTCTC...TAGCCAGGCATGGTGGTACATGCTTGTGAAGCTGAGGCAGAAGAATTGCTTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409199.5
CDS-3UTR GCA 90 bp GTGAACCTGTCAGTGCTAGGACAGATACTACCTAGCTGTTCCTGCCTATACCACACACACCGACTGTTTTaGATCAGCTCCTCCAACTCT +
Preference number: 4 (lower is better)
Translates to: VNLSVLGQILPSCSCLYHTHRLF*ISSSNS
Trigger: AGAGTTGGAGGAGCTGATGCAAAACAGTCGGTGTGT...GTGGTATAGGCAGGAACAGCTAGGTAGTATCTGTCCTAGCACTGACAGGTTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR GCA 90 bp TCTGAGATGAGCTTCCCCACCAGGCTTCTGTCAATCACCACTTTCTCCAGCTGCATTTGTTCTTCCATTTaGTCAGCACACACCGACTGT +
Preference number: 4 (lower is better)
Translates to: SEMSFPTRLLSITTFSSCICSSI*SAHTDC
Trigger: ACAGTCGGTGTGTGCTGAGCAAATGGAAGAACAAAT...GCAGCTGGAGAAAGTGGTGATTGACAGAAGCCTGGTGGGGAAGCTCATCTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417238.5
ENST00000418148.5
CDS-3UTR GCA 90 bp GTGAACCTGTCAGTGCTAGGACAGATACTACCTAGCTGTTCCTGCCTATACCACGATAAGGCTGTTTGGTaGCAAAGCGAACATCCAGTG +
Preference number: 4 (lower is better)
Translates to: VNLSVLGQILPSCSCLYHDKAVW*QSEHPV
Trigger: CACTGGATGTTCGCTTTGGCACCAAACAGCCTTATC...GTGGTATAGGCAGGAACAGCTAGGTAGTATCTGTCCTAGCACTGACAGGTTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR GCA 90 bp CTCAAGCAATTCTTCTGCCTCAGCTTCACAAGCATGTACCACCATGCCTGGCTAGATAAGGCTGTTTGGTaGCAAAGCGAACATCCAGTG +
Preference number: 4 (lower is better)
Translates to: LKQFFCLSFTSMYHHAWLDKAVW*QSEHPV
Trigger: CACTGGATGTTCGCTTTGGCACCAAACAGCCTTATC...TAGCCAGGCATGGTGGTACATGCTTGTGAAGCTGAGGCAGAAGAATTGCTTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272321.12
ENST00000409199.5
ENST00000409354.6
CDS-3UTR GCA 90 bp CTCAAGCAATTCTTCTGCCTCAGCTTCACAAGCATGTACCACCATGCCTGGCTAGAATGCATTCATAGATaGAGCTGTCAGCCATGGGCT +
Preference number: 4 (lower is better)
Translates to: LKQFFCLSFTSMYHHAWLECIHR*SCQPWA
Trigger: AGCCCATGGCTGACAGCTGCATCTATGAATGCATTC...TAGCCAGGCATGGTGGTACATGCTTGTGAAGCTGAGGCAGAAGAATTGCTTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272321.12
ENST00000409199.5
ENST00000409354.6
CDS-3UTR GCA 90 bp GGGAAACAGTATCTGTGTTCTAAGGGGCAGTCAGGGCAAATTACTCATAGCAGTGCAACTCCCCTTGGTTaGTGCCAACTAGCAGAATGG +
Preference number: 4 (lower is better)
Translates to: GKQYLCSKGQSGQITHSSATPLG*CQLAEW
Trigger: CCATTCTGCTAGTTGGCAGCAACCAAGGGGAGTTGC...ACTGCTATGAGTAATTTGCCCTGACTGCCCCTTAGAACACAGATACTGTTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR GCA 90 bp TTTCCTGTTCTCTGCCGTCTTCTCTCAGTTCTCCGTCTTCTGCATTACAGGTATGCAACTCCCCTTGGTTaGTGCCAACTAGCAGAATGG +
Preference number: 4 (lower is better)
Translates to: FPVLCRLLSVLRLLHYRYATPLG*CQLAEW
Trigger: CCATTCTGCTAGTTGGCAGCAACCAAGGGGAGTTGC...ATACCTGTAATGCAGAAGACGGAGAACTGAGAGAAGACGGCAGAGAACAGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409354.6
CDS-3UTR GCA 90 bp GTGCCATGGTGGTGTGCTGCACCCATTAACTCGTCATTTAGCATTAGGTATATCGCAACTCCCCTTGGTTaGTGCCAACTAGCAGAATGG +
Preference number: 4 (lower is better)
Translates to: VPWWCAAPINSSFSIRYIATPLG*CQLAEW
Trigger: CCATTCTGCTAGTTGGCAGCAACCAAGGGGAGTTGC...GATATACCTAATGCTAAATGACGAGTTAATGGGTGCAGCACACCACCATGGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS-3UTR GCA 90 bp ATGAGCTTCCCCACCAGGCTTCTGTCAATCACCACTTTCTCCAGCTGCGGCCCAAATAATTTACTGAATTaGAGAGTCTCCCTGGGTAAG +
Preference number: 4 (lower is better)
Translates to: MSFPTRLLSITTFSSCGPNNLLN*RVSLGK
Trigger: CTTACCCAGGGAGACTCTGCAATTCAGTAAATTATT...TGGGCCGCAGCTGGAGAAAGTGGTGATTGACAGAAGCCTGGTGGGGAAGCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS-3UTR GCA 90 bp GATTTCCTGTTCTCTGCCGTCTTCTCTCAGTTCTCCGTCTTCTGCATTACAGGTGCTTGTCTCAAGCTGTaGTTCTCTCTCTGGAGTGAG +
Preference number: 4 (lower is better)
Translates to: DFLFSAVFSQFSVFCITGACLKL*FSLWSE
Trigger: CTCACTCCAGAGAGAGAAGCACAGCTTGAGACAAGC...ACCTGTAATGCAGAAGACGGAGAACTGAGAGAAGACGGCAGAGAACAGGAAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409354.6
CDS-3UTR GCA 90 bp TACGGAGTGCTCCACTGTGAACACCTGATAAGGCTGTTTGGTGCCAAAGCGAACTCCTTTAGCATTTCTTaGAGTGAAGGTCTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: YGVLHCEHLIRLFGAKANSFSIS*SEGLLA
Trigger: TGCCAGCAGACCTTCACTGCAAGAAATGCTAAAGGA...GTTCGCTTTGGCACCAAACAGCCTTATCAGGTGTTCACAGTGGAGCACTCCGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS-3UTR GCA 90 bp CCAAGCTTGCTGACAAGAAGCATGATGAGGTCATCAGCAGGGGACAGTCTGGAGTTGAGCTCTGAGCTCTaGAGATGTTATAAATCTGCC +
Preference number: 4 (lower is better)
Translates to: PSLLTRSMMRSSAGDSLELSSEL*RCYKSA
Trigger: GGCAGATTTATAACATCTGCAGAGCTCAGAGCTCAA...CTCCAGACTGTCCCCTGCTGATGACCTCATCATGCTTCTTGTCAGCAAGCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS-3UTR CCA 90 bp TCCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGAGCTCGCTTGGTCTCTTaGGTCTCCAGGACGCCGCCG +
Preference number: 4 (lower is better)
Translates to: STLMVVSFAVQKLFSLIRARLVS*VSRTPP
Trigger: CGGCGGCGTCCTGGAGACCCAAGAGACCAAGCGAGC...TCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS-3UTR CCA 90 bp CAACTCTTTGAGCGAGTCTCGGAGTTTTTCTGGGCGTCTGTTTTTGAGCGTCCAGTCTCGGAGTTTTTCTaGGCGTCTGTTTTTGAGCGT +
Preference number: 4 (lower is better)
Translates to: QLFERVSEFFWASVFERPVSEFF*ASVFER
Trigger: ACGCTCAAAAACAGACGCCCAGAAAAACTCCGAGAC...TGGACGCTCAAAAACAGACGCCCAGAAAAACTCCGAGACTCGCTCAAAGAGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS-3UTR CCA 90 bp CTCAAGCAATTCTTCTGCCTCAGCTTCACAAGCATGTACCACCATGCCTGGCTAATCATCGTTGACCAGTaGCCACCAGCAAACAACTCT +
Preference number: 4 (lower is better)
Translates to: LKQFFCLSFTSMYHHAWLIIVDQ*PPANNS
Trigger: AGAGTTGTTTGCTGGTGGCCACTGGTCAACGATGAT...TAGCCAGGCATGGTGGTACATGCTTGTGAAGCTGAGGCAGAAGAATTGCTTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272321.12
ENST00000409199.5
ENST00000409354.6
CDS-3UTR CCA 90 bp GTGCCATGGTGGTGTGCTGCACCCATTAACTCGTCATTTAGCATTAGGTATATCCCTTCTCAGAAGAAATaGGGGCCCAAGGCCAAGCAT +
Preference number: 4 (lower is better)
Translates to: VPWWCAAPINSSFSIRYIPSQKK*GPKAKH
Trigger: ATGCTTGGCCTTGGGCCCCCATTTCTTCTGAGAAGG...GATATACCTAATGCTAAATGACGAGTTAATGGGTGCAGCACACCACCATGGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS-3UTR CCA 90 bp GATTTCCTGTTCTCTGCCGTCTTCTCTCAGTTCTCCGTCTTCTGCATTACAGGTCCAGGAGGAGTAGATTaGCTCTGTCCTTCTCAGAAG +
Preference number: 4 (lower is better)
Translates to: DFLFSAVFSQFSVFCITGPGGVD*LCPSQK
Trigger: CTTCTGAGAAGGACAGAGCCAATCTACTCCTCCTGG...ACCTGTAATGCAGAAGACGGAGAACTGAGAGAAGACGGCAGAGAACAGGAAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409354.6
CDS-3UTR CCA 90 bp CTCAAGCAATTCTTCTGCCTCAGCTTCACAAGCATGTACCACCATGCCTGGCTACCTGATAAGGCTGTTTaGTGCCAAAGCGAACATCCA +
Preference number: 4 (lower is better)
Translates to: LKQFFCLSFTSMYHHAWLPDKAV*CQSEHP
Trigger: TGGATGTTCGCTTTGGCACCAAACAGCCTTATCAGG...TAGCCAGGCATGGTGGTACATGCTTGTGAAGCTGAGGCAGAAGAATTGCTTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272321.12
ENST00000409199.5
ENST00000409354.6
CDS-3UTR CCA 90 bp CAACTCTTTGAGCGAGTCTCGGAGTTTTTCTGGGCGTCTGTTTTTGAGCGTCCACCTGATAAGGCTGTTTaGTGCCAAAGCGAACATCCA +
Preference number: 4 (lower is better)
Translates to: QLFERVSEFFWASVFERPPDKAV*CQSEHP
Trigger: TGGATGTTCGCTTTGGCACCAAACAGCCTTATCAGG...TGGACGCTCAAAAACAGACGCCCAGAAAAACTCCGAGACTCGCTCAAAGAGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS-3UTR CCA 90 bp CTCAAGCAATTCTTCTGCCTCAGCTTCACAAGCATGTACCACCATGCCTGGCTATGCAGCTGTCAGCCATaGGCTCTTTGTCTACACTTA +
Preference number: 4 (lower is better)
Translates to: LKQFFCLSFTSMYHHAWLCSCQP*ALCLHL
Trigger: TAAGTGTAGACAAAGAGCCCATGGCTGACAGCTGCA...TAGCCAGGCATGGTGGTACATGCTTGTGAAGCTGAGGCAGAAGAATTGCTTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272321.12
ENST00000409199.5
ENST00000409354.6
CDS-3UTR CCA 90 bp CTCAAGCAATTCTTCTGCCTCAGCTTCACAAGCATGTACCACCATGCCTGGCTAATGGCACCACTTGGGTaGCAGCTTATTAATGAAGGC +
Preference number: 4 (lower is better)
Translates to: LKQFFCLSFTSMYHHAWLMAPLG*QLINEG
Trigger: GCCTTCATTAATAAGCTGCCACCCAAGTGGTGCCAT...TAGCCAGGCATGGTGGTACATGCTTGTGAAGCTGAGGCAGAAGAATTGCTTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272321.12
ENST00000409199.5
ENST00000409354.6
CDS-3UTR CCA 90 bp GTATACATGTGCCATGGTGGTGTGCTGCACCCATTAACTCGTCATTTAGCATTATGCCAACTAGCAGAATaGCACCACTTGGGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: VYMCHGGVLHPLTRHLALCQLAE*HHLGGS
Trigger: GCTGCCACCCAAGTGGTGCCATTCTGCTAGTTGGCA...TAATGCTAAATGACGAGTTAATGGGTGCAGCACACCACCATGGCACATGTATAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS-3UTR CCA 90 bp CTCAAGCAATTCTTCTGCCTCAGCTTCACAAGCATGTACCACCATGCCTGGCTAATTTGCAACTCCCCTTaGTTGCTGCCAACTAGCAGA +
Preference number: 4 (lower is better)
Translates to: LKQFFCLSFTSMYHHAWLICNSP*LLPTSR
Trigger: TCTGCTAGTTGGCAGCAACCAAGGGGAGTTGCAAAT...TAGCCAGGCATGGTGGTACATGCTTGTGAAGCTGAGGCAGAAGAATTGCTTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272321.12
ENST00000409199.5
ENST00000409354.6
CDS-3UTR CCA 90 bp TTTCCTGTTCTCTGCCGTCTTCTCTCAGTTCTCCGTCTTCTGCATTACAGGTATATTGCAGAGTCTCCCTaGGTAAGCGGTCTTCAGCCA +
Preference number: 4 (lower is better)
Translates to: FPVLCRLLSVLRLLHYRYIAESP*VSGLQP
Trigger: TGGCTGAAGACCGCTTACCCAGGGAGACTCTGCAAT...ATACCTGTAATGCAGAAGACGGAGAACTGAGAGAAGACGGCAGAGAACAGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409354.6
CDS-3UTR CCA 90 bp TTTCCTGTTCTCTGCCGTCTTCTCTCAGTTCTCCGTCTTCTGCATTACAGGTATCTGATAAAGCACTGGTaGCCCAGAGTGTCCCAGTTC +
Preference number: 4 (lower is better)
Translates to: FPVLCRLLSVLRLLHYRYLIKHW*PRVSQF
Trigger: GAACTGGGACACTCTGGGCCACCAGTGCTTTATCAG...ATACCTGTAATGCAGAAGACGGAGAACTGAGAGAAGACGGCAGAGAACAGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409354.6
CDS-3UTR CCA 90 bp CTCAAGCAATTCTTCTGCCTCAGCTTCACAAGCATGTACCACCATGCCTGGCTACTGTGCTTCTCTCTCTaGAGTGAGCTTCTGTCTAAG +
Preference number: 4 (lower is better)
Translates to: LKQFFCLSFTSMYHHAWLLCFSL*SELLSK
Trigger: CTTAGACAGAAGCTCACTCCAGAGAGAGAAGCACAG...TAGCCAGGCATGGTGGTACATGCTTGTGAAGCTGAGGCAGAAGAATTGCTTGAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272321.12
ENST00000409199.5
ENST00000409354.6
CDS-3UTR CCA 90 bp GATTTCCTGTTCTCTGCCGTCTTCTCTCAGTTCTCCGTCTTCTGCATTACAGGTAATATGTCTGTGGGTTaGGCAAGAGGGAGGGAGGTT +
Preference number: 4 (lower is better)
Translates to: DFLFSAVFSQFSVFCITGNMSVG*ARGREV
Trigger: AACCTCCCTCCCTCTTGCCCAACCCACAGACATATT...ACCTGTAATGCAGAAGACGGAGAACTGAGAGAAGACGGCAGAGAACAGGAAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409354.6
CDS-3UTR CCA 90 bp CTCAAGCAATTCTTCTGCCTCAGCTTCACAAGCATGTACCACCATGCCTGGCTATGTAAAATATGTCTGTaGGTTGGGCAAGAGGGAGGG +
Preference number: 4 (lower is better)
Translates to: LKQFFCLSFTSMYHHAWLCKICL*VGQEGG
Trigger: CCCTCCCTCTTGCCCAACCCACAGACATATTTTACA...TAGCCAGGCATGGTGGTACATGCTTGTGAAGCTGAGGCAGAAGAATTGCTTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272321.12
ENST00000409199.5
ENST00000409354.6
CDS-3UTR CCA 90 bp CCAAGCTTGCTGACAAGAAGCATGATGAGGTCATCAGCAGGGGACAGTCTGGAGGCCTTCAGAGAGTTGTaGGTTTTCTGTATTTTGTCC +
Preference number: 4 (lower is better)
Translates to: PSLLTRSMMRSSAGDSLEAFREL*VFCILS
Trigger: GGACAAAATACAGAAAACCCACAACTCTCTGAAGGC...CTCCAGACTGTCCCCTGCTGATGACCTCATCATGCTTCTTGTCAGCAAGCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000417238.5
3UTR CAA 72 bp GATAGAGCCATATCAAAAATTTGCAACTCCCCTTGGTaGCTGCCAACTAGCAGAATGGCACCACTTGGGTGG +
Preference number: 4 (lower is better)
Translates to: DRAISKICNSPW*LPTSRMAPLGW
Trigger: CCACCCAAGTGGTGCCATTCTGCTAGTTGGCAGCAACCAAGGGGAGTTGCAAATTTTTGATATGGCTCTATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS-3UTR TCA 90 bp GTGCCATGGTGGTGTGCTGCACCCATTAACTCGTCATTTAGCATTAGGTATATCCCAAGGATAATCTCGTaGCTCTGCCAGCTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: VPWWCAAPINSSFSIRYIPRIIS*LCQLLL
Trigger: AAGCAGAAGCTGGCAGAGTCACGAGATTATCCTTGG...GATATACCTAATGCTAAATGACGAGTTAATGGGTGCAGCACACCACCATGGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS-3UTR TCA 90 bp GCCCAAGGCCAAGCATCATCGTTGACCAGTGGCCACCAGCAAACAACTCTATCACATCAAATAATTTACTaGATTGCAGAGTCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: AQGQASSLTSGHQQTTLSHQIIY*IAESPW
Trigger: CCAGGGAGACTCTGCAATTCAGTAAATTATTTGATG...TGATAGAGTTGTTTGCTGGTGGCCACTGGTCAACGATGATGCTTGGCCTTGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS-3UTR TCA 90 bp GATTTCCTGTTCTCTGCCGTCTTCTCTCAGTTCTCCGTCTTCTGCATTACAGGTGCTATCCATTGCATTTaGACAAGACTGCTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: DFLFSAVFSQFSVFCITGAIHCI*TRLLEA
Trigger: TGCCTCCAGCAGTCTTGTTCAAATGCAATGGATAGC...ACCTGTAATGCAGAAGACGGAGAACTGAGAGAAGACGGCAGAGAACAGGAAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409354.6
CDS-3UTR TCA 90 bp GTGAACCTGTCAGTGCTAGGACAGATACTACCTAGCTGTTCCTGCCTATACCACGTCCTCTTTCAAACCTaGGGAAGAGGAGATCATAGA +
Preference number: 4 (lower is better)
Translates to: VNLSVLGQILPSCSCLYHVLFQT*GRGDHR
Trigger: TCTATGATCTCCTCTTCCTCAGGTTTGAAAGAGGAC...GTGGTATAGGCAGGAACAGCTAGGTAGTATCTGTCCTAGCACTGACAGGTTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR TCA 90 bp CTCAAGCAATTCTTCTGCCTCAGCTTCACAAGCATGTACCACCATGCCTGGCTAGTCCTCTTTCAAACCTaGGGAAGAGGAGATCATAGA +
Preference number: 4 (lower is better)
Translates to: LKQFFCLSFTSMYHHAWLVLFQT*GRGDHR
Trigger: TCTATGATCTCCTCTTCCTCAGGTTTGAAAGAGGAC...TAGCCAGGCATGGTGGTACATGCTTGTGAAGCTGAGGCAGAAGAATTGCTTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272321.12
ENST00000409199.5
ENST00000409354.6
CDS-3UTR TCA 90 bp GATTTCCTGTTCTCTGCCGTCTTCTCTCAGTTCTCCGTCTTCTGCATTACAGGTCAAACCTCTGGTACCTaGGCAAGTGATGGAAGAATC +
Preference number: 4 (lower is better)
Translates to: DFLFSAVFSQFSVFCITGQTSGT*ASDGRI
Trigger: GATTCTTCCATCACTTGCTCAGGTACCAGAGGTTTG...ACCTGTAATGCAGAAGACGGAGAACTGAGAGAAGACGGCAGAGAACAGGAAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409354.6
CDS-3UTR TCA 90 bp TTTCCTGTTCTCTGCCGTCTTCTCTCAGTTCTCCGTCTTCTGCATTACAGGTATGAGAACCACCATCTCTaGTTTCCTGTTCTCTGCCGT +
Preference number: 4 (lower is better)
Translates to: FPVLCRLLSVLRLLHYRYENHHL*FPVLCR
Trigger: ACGGCAGAGAACAGGAAATCAGAGATGGTGGTTCTC...ATACCTGTAATGCAGAAGACGGAGAACTGAGAGAAGACGGCAGAGAACAGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409354.6
CDS-3UTR GCA 90 bp GGACAGATACTACCTAGCTGTTCCTGCCTATACCACTCTTCTTACTTTAGAGCTGTGGGTCCCATTCTGTaGGGACAGAACTCAGAACCT +
Preference number: 4 (lower is better)
Translates to: GQILPSCSCLYHSSYFRAVGPIL*GQNSEP
Trigger: AGGTTCTGAGTTCTGTCCGCACAGAATGGGACCCAC...AGCTCTAAAGTAAGAAGAGTGGTATAGGCAGGAACAGCTAGGTAGTATCTGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR GCA 90 bp GATTTCCTGTTCTCTGCCGTCTTCTCTCAGTTCTCCGTCTTCTGCATTACAGGTGATAAGGCTGTTTGGTaGCAAAGCGAACATCCAGTG +
Preference number: 4 (lower is better)
Translates to: DFLFSAVFSQFSVFCITGDKAVW*QSEHPV
Trigger: CACTGGATGTTCGCTTTGGCACCAAACAGCCTTATC...ACCTGTAATGCAGAAGACGGAGAACTGAGAGAAGACGGCAGAGAACAGGAAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409354.6
CDS-3UTR GCA 90 bp CTCAAGCAATTCTTCTGCCTCAGCTTCACAAGCATGTACCACCATGCCTGGCTAGAGTGTCCCAGTTCATaGTGCTCAGGATGTTTATTG +
Preference number: 4 (lower is better)
Translates to: LKQFFCLSFTSMYHHAWLECPSS*CSGCLL
Trigger: CAATAAACATCCTGAGCAGCATGAACTGGGACACTC...TAGCCAGGCATGGTGGTACATGCTTGTGAAGCTGAGGCAGAAGAATTGCTTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272321.12
ENST00000409199.5
ENST00000409354.6
CDS-3UTR GCA 90 bp GTTCTAAGGGGCAGTCAGGGCAAATTACTCATAGCAGTAATTCGAGAGAACCATCATGAGCACTATGCCTaGCCCCTACTGCCCCTTTTT +
Preference number: 4 (lower is better)
Translates to: VLRGSQGKLLIAVIRENHHEHYA*PLLPLF
Trigger: AAAAAGGGGCAGTAGGGGGCAGGCATAGTGCTCATG...ATGGTTCTCTCGAATTACTGCTATGAGTAATTTGCCCTGACTGCCCCTTAGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR GCA 90 bp CTCAAGCAATTCTTCTGCCTCAGCTTCACAAGCATGTACCACCATGCCTGGCTACTACCTAGCTGTTCCTaGCTATACCACTCTTCTTAC +
Preference number: 4 (lower is better)
Translates to: LKQFFCLSFTSMYHHAWLLPSCS*LYHSSY
Trigger: GTAAGAAGAGTGGTATAGGCAGGAACAGCTAGGTAG...TAGCCAGGCATGGTGGTACATGCTTGTGAAGCTGAGGCAGAAGAATTGCTTGAG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR CCA 90 bp CCAAGCTTGCTGACAAGAAGCATGATGAGGTCATCAGCAGGGGACAGTCTGGAGATGCTCTGTCGCTGGTaGATCTTTCTTGTCATAATA +
Preference number: 4 (lower is better)
Translates to: PSLLTRSMMRSSAGDSLEMLCRW*IFLVII
Trigger: TATTATGACAAGAAAGATCCACCAGCGACAGAGCAT...CTCCAGACTGTCCCCTGCTGATGACCTCATCATGCTTCTTGTCAGCAAGCTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS-3UTR CCA 90 bp CTCAAGCAATTCTTCTGCCTCAGCTTCACAAGCATGTACCACCATGCCTGGCTAACCATGCTCTGTCGCTaGTGGATCTTTCTTGTCATA +
Preference number: 4 (lower is better)
Translates to: LKQFFCLSFTSMYHHAWLTMLCR*WIFLVI
Trigger: TATGACAAGAAAGATCCACCAGCGACAGAGCATGGT...TAGCCAGGCATGGTGGTACATGCTTGTGAAGCTGAGGCAGAAGAATTGCTTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR CCA 90 bp CAACTCTTTGAGCGAGTCTCGGAGTTTTTCTGGGCGTCTGTTTTTGAGCGTCCAACCATGCTCTGTCGCTaGTGGATCTTTCTTGTCATA +
Preference number: 4 (lower is better)
Translates to: QLFERVSEFFWASVFERPTMLCR*WIFLVI
Trigger: TATGACAAGAAAGATCCACCAGCGACAGAGCATGGT...TGGACGCTCAAAAACAGACGCCCAGAAAAACTCCGAGACTCGCTCAAAGAGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS-3UTR CCA 90 bp CCTTTCTCCAGAGGGAAACAGTATCTGTGTTCTAAGGGGCAGTCAGGGCAAATTATCATCGTTGACCAGTaGCCACCAGCAAACAACTCT +
Preference number: 4 (lower is better)
Translates to: PFSRGKQYLCSKGQSGQIIIVDQ*PPANNS
Trigger: AGAGTTGTTTGCTGGTGGCCACTGGTCAACGATGAT...AATTTGCCCTGACTGCCCCTTAGAACACAGATACTGTTTCCCTCTGGAGAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR CCA 90 bp GATTTCCTGTTCTCTGCCGTCTTCTCTCAGTTCTCCGTCTTCTGCATTACAGGTATCATCGTTGACCAGTaGCCACCAGCAAACAACTCT +
Preference number: 4 (lower is better)
Translates to: DFLFSAVFSQFSVFCITGIIVDQ*PPANNS
Trigger: AGAGTTGTTTGCTGGTGGCCACTGGTCAACGATGAT...ACCTGTAATGCAGAAGACGGAGAACTGAGAGAAGACGGCAGAGAACAGGAAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409354.6
CDS-3UTR CCA 90 bp GTATACATGTGCCATGGTGGTGTGCTGCACCCATTAACTCGTCATTTAGCATTAAAAGCGAACATCCAGTaGGTCCCATTCTGTGCGGAC +
Preference number: 4 (lower is better)
Translates to: VYMCHGGVLHPLTRHLALKANIQ*VPFCAD
Trigger: GTCCGCACAGAATGGGACCCACTGGATGTTCGCTTT...TAATGCTAAATGACGAGTTAATGGGTGCAGCACACCACCATGGCACATGTATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS-3UTR CCA 90 bp AATGGTATTTCTAGTTCCAGATCCCTGAGGAATCGCCACACTGACTTCCACAATATTGCAGAGTCTCCCTaGGTAAGCGGTCTTCAGCCA +
Preference number: 4 (lower is better)
Translates to: NGISSSRSLRNRHTDFHNIAESP*VSGLQP
Trigger: TGGCTGAAGACCGCTTACCCAGGGAGACTCTGCAAT...ATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTGGAACTAGAAATACCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS-3UTR CCA 90 bp ACTAGCAGAATGGCACCACTTGGGTGGCAGCTTATTAATGAAGGCAAAAGTTCACTGATAAAGCACTGGTaGCCCAGAGTGTCCCAGTTC +
Preference number: 4 (lower is better)
Translates to: TSRMAPLGWQLINEGKSSLIKHW*PRVSQF
Trigger: GAACTGGGACACTCTGGGCCACCAGTGCTTTATCAG...TGAACTTTTGCCTTCATTAATAAGCTGCCACCCAAGTGGTGCCATTCTGCTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS-3UTR CCA 90 bp AATGGTATTTCTAGTTCCAGATCCCTGAGGAATCGCCACACTGACTTCCACAATATGCTGATAAAGCACTaGTGGCCCAGAGTGTCCCAG +
Preference number: 4 (lower is better)
Translates to: NGISSSRSLRNRHTDFHNMLIKH*WPRVSQ
Trigger: CTGGGACACTCTGGGCCACCAGTGCTTTATCAGCAT...ATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTGGAACTAGAAATACCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS-3UTR CCA 90 bp CTCAAGCAATTCTTCTGCCTCAGCTTCACAAGCATGTACCACCATGCCTGGCTACAGAAGTGGTCTTGTTaGAGCATAGAAGGTTCCAAG +
Preference number: 4 (lower is better)
Translates to: LKQFFCLSFTSMYHHAWLQKWSC*SIEGSK
Trigger: CTTGGAACCTTCTATGCTCCAACAAGACCACTTCTG...TAGCCAGGCATGGTGGTACATGCTTGTGAAGCTGAGGCAGAAGAATTGCTTGAG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272321.12
ENST00000409199.5
ENST00000409354.6
CDS-3UTR CCA 90 bp TCCAGAGGGAAACAGTATCTGTGTTCTAAGGGGCAGTCAGGGCAAATTACTCATAATATGTCTGTGGGTTaGGCAAGAGGGAGGGAGGTT +
Preference number: 4 (lower is better)
Translates to: SRGKQYLCSKGQSGQITHNMSVG*ARGREV
Trigger: AACCTCCCTCCCTCTTGCCCAACCCACAGACATATT...ATGAGTAATTTGCCCTGACTGCCCCTTAGAACACAGATACTGTTTCCCTCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR CCA 90 bp GATTTCCTGTTCTCTGCCGTCTTCTCTCAGTTCTCCGTCTTCTGCATTACAGGTCTAGTCTTGAACTCCTaGGCTCAAGTGATCCTTCAG +
Preference number: 4 (lower is better)
Translates to: DFLFSAVFSQFSVFCITGLVLNS*AQVILQ
Trigger: CTGAAGGATCACTTGAGCCCAGGAGTTCAAGACTAG...ACCTGTAATGCAGAAGACGGAGAACTGAGAGAAGACGGCAGAGAACAGGAAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409354.6
CDS-3UTR TCA 90 bp AATGGTATTTCTAGTTCCAGATCCCTGAGGAATCGCCACACTGACTTCCACAATAGACACCAGCACACCTaGACCAAAAAGGAGCTGACA +
Preference number: 4 (lower is better)
Translates to: NGISSSRSLRNRHTDFHNRHQHT*TKKELT
Trigger: TGTCAGCTCCTTTTTGGTTCAGGTGTGCTGGTGTCT...ATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTGGAACTAGAAATACCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS-3UTR TCA 90 bp ACTAGCAGAATGGCACCACTTGGGTGGCAGCTTATTAATGAAGGCAAAAGTTCAAGACACCAGCACACCTaGACCAAAAAGGAGCTGACA +
Preference number: 4 (lower is better)
Translates to: TSRMAPLGWQLINEGKSSRHQHT*TKKELT
Trigger: TGTCAGCTCCTTTTTGGTTCAGGTGTGCTGGTGTCT...TGAACTTTTGCCTTCATTAATAAGCTGCCACCCAAGTGGTGCCATTCTGCTAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS-3UTR TCA 90 bp GCCCAAGGCCAAGCATCATCGTTGACCAGTGGCCACCAGCAAACAACTCTATCACTTATAATCCAAGGCTaGGAGTTTTTCCAGTCTTTT +
Preference number: 4 (lower is better)
Translates to: AQGQASSLTSGHQQTTLSLIIQG*EFFQSF
Trigger: AAAAGACTGGAAAAACTCTCAGCCTTGGATTATAAG...TGATAGAGTTGTTTGCTGGTGGCCACTGGTCAACGATGATGCTTGGCCTTGGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS-3UTR TCA 90 bp CTCAAGCAATTCTTCTGCCTCAGCTTCACAAGCATGTACCACCATGCCTGGCTATTAGTGGTATTCTGGTaGCTGACACACACTGGATTT +
Preference number: 4 (lower is better)
Translates to: LKQFFCLSFTSMYHHAWLLVVFW*LTHTGF
Trigger: AAATCCAGTGTGTGTCAGTCACCAGAATACCACTAA...TAGCCAGGCATGGTGGTACATGCTTGTGAAGCTGAGGCAGAAGAATTGCTTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272321.12
ENST00000409199.5
ENST00000409354.6
CDS-3UTR TCA 90 bp AATGGTATTTCTAGTTCCAGATCCCTGAGGAATCGCCACACTGACTTCCACAATCATTCCTGCAGCAGCTaGTGGCCTTTGACTTTAGTG +
Preference number: 4 (lower is better)
Translates to: NGISSSRSLRNRHTDFHNHSCSS*WPLTLV
Trigger: CACTAAAGTCAAAGGCCATCAGCTGCTGCAGGAATG...ATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTGGAACTAGAAATACCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS-3UTR TCA 90 bp TGTGCTTCTCTCTCTGGAGTGAGCTTCTGTCTAAGAAGATGGTTTACAATGGCGGCTATCCATTGCATTTaGACAAGACTGCTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: CASLSGVSFCLRRWFTMAAIHCI*TRLLEA
Trigger: TGCCTCCAGCAGTCTTGTTCAAATGCAATGGATAGC...CGCCATTGTAAACCATCTTCTTAGACAGAAGCTCACTCCAGAGAGAGAAGCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS-3UTR TCA 90 bp GGGAAACAGTATCTGTGTTCTAAGGGGCAGTCAGGGCAAATTACTCATAGCAGTGAATGTACTGGAAGATaGTGTCTATCAGGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: GKQYLCSKGQSGQITHSSECTGR*CLSGPA
Trigger: AGCTGGGCCTGATAGACATCATCTTCCAGTACATTC...ACTGCTATGAGTAATTTGCCCTGACTGCCCCTTAGAACACAGATACTGTTTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR TCA 90 bp GTGCCATGGTGGTGTGCTGCACCCATTAACTCGTCATTTAGCATTAGGTATATCCAAACCTCTGGTACCTaGGCAAGTGATGGAAGAATC +
Preference number: 4 (lower is better)
Translates to: VPWWCAAPINSSFSIRYIQTSGT*ASDGRI
Trigger: GATTCTTCCATCACTTGCTCAGGTACCAGAGGTTTG...GATATACCTAATGCTAAATGACGAGTTAATGGGTGCAGCACACCACCATGGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS-3UTR TCA 90 bp CTCAAGCAATTCTTCTGCCTCAGCTTCACAAGCATGTACCACCATGCCTGGCTAAACCCCAGAGGTTATTaGTTCTGCATCAATGTCACT +
Preference number: 4 (lower is better)
Translates to: LKQFFCLSFTSMYHHAWLNPRGY*FCINVT
Trigger: AGTGACATTGATGCAGAATCAATAACCTCTGGGGTT...TAGCCAGGCATGGTGGTACATGCTTGTGAAGCTGAGGCAGAAGAATTGCTTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272321.12
ENST00000409199.5
CDS-3UTR TCA 90 bp TTTCCTGTTCTCTGCCGTCTTCTCTCAGTTCTCCGTCTTCTGCATTACAGGTATGAGGTTATCTGGAAATaGGTCTTCTCCTTGAGGTGC +
Preference number: 4 (lower is better)
Translates to: FPVLCRLLSVLRLLHYRYEVIWK*VFSLRC
Trigger: GCACCTCAAGGAGAAGACTCATTTCCAGATAACCTC...ATACCTGTAATGCAGAAGACGGAGAACTGAGAGAAGACGGCAGAGAACAGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409354.6
CDS-3UTR TCA 90 bp ACTAGCAGAATGGCACCACTTGGGTGGCAGCTTATTAATGAAGGCAAAAGTTCAGGTCAACAACTGTCTTaGTCAGGAGTATGGTGGGTC +
Preference number: 4 (lower is better)
Translates to: TSRMAPLGWQLINEGKSSGQQLS*SGVWWV
Trigger: GACCCACCATACTCCTGATCAAGACAGTTGTTGACC...TGAACTTTTGCCTTCATTAATAAGCTGCCACCCAAGTGGTGCCATTCTGCTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS-3UTR TCA 90 bp GTGCCATGGTGGTGTGCTGCACCCATTAACTCGTCATTTAGCATTAGGTATATCATGCGGCATTATTTCTaGGGGCTCTGTTCTGTTCCA +
Preference number: 4 (lower is better)
Translates to: VPWWCAAPINSSFSIRYIMRHYF*GLCSVP
Trigger: TGGAACAGAACAGAGCCCTCAGAAATAATGCCGCAT...GATATACCTAATGCTAAATGACGAGTTAATGGGTGCAGCACACCACCATGGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS-3UTR GCA 90 bp AGTCCTTGCCCATGCCTGTGTCCTGAATGGTATTGCCTAGGTTTTCTTCTAGGGTTCAAAGACCACAGGTaGAGTTCAGTCAAGCAGAAA +
Preference number: 4 (lower is better)
Translates to: SPCPCLCPEWYCLGFLLGFKDHR*SSVKQK
Trigger: TTTCTGCTTGACTGAACTGCACCTGTGGTCTTTGAA...CCCTAGAAGAAAACCTAGGCAATACCATTCAGGACACAGGCATGGGCAAGGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS-3UTR GCA 90 bp CTCAAGCAATTCTTCTGCCTCAGCTTCACAAGCATGTACCACCATGCCTGGCTATTTTCTAAGTTACCATaGTCTGTCGCTGGTGGATCT +
Preference number: 4 (lower is better)
Translates to: LKQFFCLSFTSMYHHAWLFSKLP*SVAGGS
Trigger: AGATCCACCAGCGACAGAGCATGGTAACTTAGAAAA...TAGCCAGGCATGGTGGTACATGCTTGTGAAGCTGAGGCAGAAGAATTGCTTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR GCA 90 bp AGTCCTTGCCCATGCCTGTGTCCTGAATGGTATTGCCTAGGTTTTCTTCTAGGGTTTTCTAAGTTACCATaGTCTGTCGCTGGTGGATCT +
Preference number: 4 (lower is better)
Translates to: SPCPCLCPEWYCLGFLLGFSKLP*SVAGGS
Trigger: AGATCCACCAGCGACAGAGCATGGTAACTTAGAAAA...CCCTAGAAGAAAACCTAGGCAATACCATTCAGGACACAGGCATGGGCAAGGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS-3UTR GCA 90 bp CTCAAGCAATTCTTCTGCCTCAGCTTCACAAGCATGTACCACCATGCCTGGCTAGACTCTGCCAGCTTCTaGTTCTTTTCTAAGTTACCA +
Preference number: 4 (lower is better)
Translates to: LKQFFCLSFTSMYHHAWLDSASF*FFSKLP
Trigger: TGGTAACTTAGAAAAGAAGCAGAAGCTGGCAGAGTC...TAGCCAGGCATGGTGGTACATGCTTGTGAAGCTGAGGCAGAAGAATTGCTTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR GCA 90 bp GGGAAACAGTATCTGTGTTCTAAGGGGCAGTCAGGGCAAATTACTCATAGCAGTGAATGCATTCATAGATaGAGCTGTCAGCCATGGGCT +
Preference number: 4 (lower is better)
Translates to: GKQYLCSKGQSGQITHSSECIHR*SCQPWA
Trigger: AGCCCATGGCTGACAGCTGCATCTATGAATGCATTC...ACTGCTATGAGTAATTTGCCCTGACTGCCCCTTAGAACACAGATACTGTTTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR GCA 90 bp TTTCCTGTTCTCTGCCGTCTTCTCTCAGTTCTCCGTCTTCTGCATTACAGGTATGAATGCATTCATAGATaGAGCTGTCAGCCATGGGCT +
Preference number: 4 (lower is better)
Translates to: FPVLCRLLSVLRLLHYRYECIHR*SCQPWA
Trigger: AGCCCATGGCTGACAGCTGCATCTATGAATGCATTC...ATACCTGTAATGCAGAAGACGGAGAACTGAGAGAAGACGGCAGAGAACAGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409354.6
CDS-3UTR GCA 90 bp CTCAAGCAATTCTTCTGCCTCAGCTTCACAAGCATGTACCACCATGCCTGGCTAGCCATATCAAAAATTTaGAACTCCCCTTGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: LKQFFCLSFTSMYHHAWLAISKI*NSPWLL
Trigger: CAGCAACCAAGGGGAGTTGCAAATTTTTGATATGGC...TAGCCAGGCATGGTGGTACATGCTTGTGAAGCTGAGGCAGAAGAATTGCTTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272321.12
ENST00000409199.5
ENST00000409354.6
CDS-3UTR GCA 90 bp GTTCTAAGGGGCAGTCAGGGCAAATTACTCATAGCAGTAATTCGAGAGAACCATGCTTGTCTCAAGCTGTaGTTCTCTCTCTGGAGTGAG +
Preference number: 4 (lower is better)
Translates to: VLRGSQGKLLIAVIRENHACLKL*FSLWSE
Trigger: CTCACTCCAGAGAGAGAAGCACAGCTTGAGACAAGC...ATGGTTCTCTCGAATTACTGCTATGAGTAATTTGCCCTGACTGCCCCTTAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR GCA 90 bp AAATTTGCAACTCCCCTTGGTTGCTGCCAACTAGCAGAATGGCACCACTTGGGTTGGTGGGTCTGCAGATaGAGTTCACTCTCTTATAAA +
Preference number: 4 (lower is better)
Translates to: KFATPLGCCQLAEWHHLGWWVCR*SSLSYK
Trigger: TTTATAAGAGAGTGAACTGCATCTGCAGACCCACCA...ACCCAAGTGGTGCCATTCTGCTAGTTGGCAGCAACCAAGGGGAGTTGCAAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS-3UTR GCA 90 bp TCTGAGATGAGCTTCCCCACCAGGCTTCTGTCAATCACCACTTTCTCCAGCTGCTTAATAGCTGCAGTTTaGACATACTATGTATGCCCT +
Preference number: 4 (lower is better)
Translates to: SEMSFPTRLLSITTFSSCLIAAV*TYYVCP
Trigger: AGGGCATACATAGTATGTGCAAACTGCAGCTATTAA...GCAGCTGGAGAAAGTGGTGATTGACAGAAGCCTGGTGGGGAAGCTCATCTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS-3UTR CCA 90 bp TCCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGAGACTCCCGGCCGCTTTaGAGTAGGCGTCCCAGCAAA +
Preference number: 4 (lower is better)
Translates to: STLMVVSFAVQKLFSLIRDSRPL*SRRPSK
Trigger: TTTGCTGGGACGCCTACTCCAAAGCGGCCGGGAGTC...TCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS-3UTR CCA 90 bp TCCAGAGGGAAACAGTATCTGTGTTCTAAGGGGCAGTCAGGGCAAATTACTCATGTCTCGGAGTTTTTCTaGGCGTCTGTTTTTGAGCGT +
Preference number: 4 (lower is better)
Translates to: SRGKQYLCSKGQSGQITHVSEFF*ASVFER
Trigger: ACGCTCAAAAACAGACGCCCAGAAAAACTCCGAGAC...ATGAGTAATTTGCCCTGACTGCCCCTTAGAACACAGATACTGTTTCCCTCTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR CCA 90 bp GTGCCATGGTGGTGTGCTGCACCCATTAACTCGTCATTTAGCATTAGGTATATCGTCTCGGAGTTTTTCTaGGCGTCTGTTTTTGAGCGT +
Preference number: 4 (lower is better)
Translates to: VPWWCAAPINSSFSIRYIVSEFF*ASVFER
Trigger: ACGCTCAAAAACAGACGCCCAGAAAAACTCCGAGAC...GATATACCTAATGCTAAATGACGAGTTAATGGGTGCAGCACACCACCATGGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS-3UTR CCA 90 bp TCTTCACAGCCCAGAATCAGTTTGTCTTCAGTAACATTCCTGCAGCAGCTGATGATCATCGTTGACCAGTaGCCACCAGCAAACAACTCT +
Preference number: 4 (lower is better)
Translates to: SSQPRISLSSVTFLQQLMIIVDQ*PPANNS
Trigger: AGAGTTGTTTGCTGGTGGCCACTGGTCAACGATGAT...CATCAGCTGCTGCAGGAATGTTACTGAAGACAAACTGATTCTGGGCTGTGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS-3UTR CCA 90 bp GGACAGATACTACCTAGCTGTTCCTGCCTATACCACTCTTCTTACTTTAGAGCTCCAGGAGGAGTAGATTaGCTCTGTCCTTCTCAGAAG +
Preference number: 4 (lower is better)
Translates to: GQILPSCSCLYHSSYFRAPGGVD*LCPSQK
Trigger: CTTCTGAGAAGGACAGAGCCAATCTACTCCTCCTGG...AGCTCTAAAGTAAGAAGAGTGGTATAGGCAGGAACAGCTAGGTAGTATCTGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR CCA 90 bp TTTCCTGTTCTCTGCCGTCTTCTCTCAGTTCTCCGTCTTCTGCATTACAGGTATTGCAGCTGTCAGCCATaGGCTCTTTGTCTACACTTA +
Preference number: 4 (lower is better)
Translates to: FPVLCRLLSVLRLLHYRYCSCQP*ALCLHL
Trigger: TAAGTGTAGACAAAGAGCCCATGGCTGACAGCTGCA...ATACCTGTAATGCAGAAGACGGAGAACTGAGAGAAGACGGCAGAGAACAGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409354.6
CDS-3UTR CCA 90 bp GTGCCATGGTGGTGTGCTGCACCCATTAACTCGTCATTTAGCATTAGGTATATCTGCAGCTGTCAGCCATaGGCTCTTTGTCTACACTTA +
Preference number: 4 (lower is better)
Translates to: VPWWCAAPINSSFSIRYICSCQP*ALCLHL
Trigger: TAAGTGTAGACAAAGAGCCCATGGCTGACAGCTGCA...GATATACCTAATGCTAAATGACGAGTTAATGGGTGCAGCACACCACCATGGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS-3UTR CCA 90 bp TTTCCTGTTCTCTGCCGTCTTCTCTCAGTTCTCCGTCTTCTGCATTACAGGTATATGGCACCACTTGGGTaGCAGCTTATTAATGAAGGC +
Preference number: 4 (lower is better)
Translates to: FPVLCRLLSVLRLLHYRYMAPLG*QLINEG
Trigger: GCCTTCATTAATAAGCTGCCACCCAAGTGGTGCCAT...ATACCTGTAATGCAGAAGACGGAGAACTGAGAGAAGACGGCAGAGAACAGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409354.6
CDS-3UTR CCA 90 bp CAACAGCACACCCAAAGGTCCTCTTTCAAACCTGAGGAAGAGGAGATCATAGATATGGCACCACTTGGGTaGCAGCTTATTAATGAAGGC +
Preference number: 4 (lower is better)
Translates to: QQHTQRSSFKPEEEEIIDMAPLG*QLINEG
Trigger: GCCTTCATTAATAAGCTGCCACCCAAGTGGTGCCAT...ATCTATGATCTCCTCTTCCTCAGGTTTGAAAGAGGACCTTTGGGTGTGCTGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS-3UTR CCA 90 bp GGGAAACAGTATCTGTGTTCTAAGGGGCAGTCAGGGCAAATTACTCATAGCAGTATTTGCAACTCCCCTTaGTTGCTGCCAACTAGCAGA +
Preference number: 4 (lower is better)
Translates to: GKQYLCSKGQSGQITHSSICNSP*LLPTSR
Trigger: TCTGCTAGTTGGCAGCAACCAAGGGGAGTTGCAAAT...ACTGCTATGAGTAATTTGCCCTGACTGCCCCTTAGAACACAGATACTGTTTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR CCA 90 bp TTTCCTGTTCTCTGCCGTCTTCTCTCAGTTCTCCGTCTTCTGCATTACAGGTATATTTGCAACTCCCCTTaGTTGCTGCCAACTAGCAGA +
Preference number: 4 (lower is better)
Translates to: FPVLCRLLSVLRLLHYRYICNSP*LLPTSR
Trigger: TCTGCTAGTTGGCAGCAACCAAGGGGAGTTGCAAAT...ATACCTGTAATGCAGAAGACGGAGAACTGAGAGAAGACGGCAGAGAACAGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409354.6
CDS-3UTR CCA 90 bp CAACAGCACACCCAAAGGTCCTCTTTCAAACCTGAGGAAGAGGAGATCATAGATATTTGCAACTCCCCTTaGTTGCTGCCAACTAGCAGA +
Preference number: 4 (lower is better)
Translates to: QQHTQRSSFKPEEEEIIDICNSP*LLPTSR
Trigger: TCTGCTAGTTGGCAGCAACCAAGGGGAGTTGCAAAT...ATCTATGATCTCCTCTTCCTCAGGTTTGAAAGAGGACCTTTGGGTGTGCTGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS-3UTR CCA 90 bp TTTCCTGTTCTCTGCCGTCTTCTCTCAGTTCTCCGTCTTCTGCATTACAGGTATCTGTGCTTCTCTCTCTaGAGTGAGCTTCTGTCTAAG +
Preference number: 4 (lower is better)
Translates to: FPVLCRLLSVLRLLHYRYLCFSL*SELLSK
Trigger: CTTAGACAGAAGCTCACTCCAGAGAGAGAAGCACAG...ATACCTGTAATGCAGAAGACGGAGAACTGAGAGAAGACGGCAGAGAACAGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409354.6
CDS-3UTR CCA 90 bp CTCAAGCAATTCTTCTGCCTCAGCTTCACAAGCATGTACCACCATGCCTGGCTAAGTGGAATCCAGAAGTaGTCTTGTTGGAGCATAGAA +
Preference number: 4 (lower is better)
Translates to: LKQFFCLSFTSMYHHAWLSGIQK*SCWSIE
Trigger: TTCTATGCTCCAACAAGACCACTTCTGGATTCCACT...TAGCCAGGCATGGTGGTACATGCTTGTGAAGCTGAGGCAGAAGAATTGCTTGAG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272321.12
ENST00000409199.5
ENST00000409354.6
CDS-3UTR CCA 90 bp GGGAAACAGTATCTGTGTTCTAAGGGGCAGTCAGGGCAAATTACTCATAGCAGTTGTAAAATATGTCTGTaGGTTGGGCAAGAGGGAGGG +
Preference number: 4 (lower is better)
Translates to: GKQYLCSKGQSGQITHSSCKICL*VGQEGG
Trigger: CCCTCCCTCTTGCCCAACCCACAGACATATTTTACA...ACTGCTATGAGTAATTTGCCCTGACTGCCCCTTAGAACACAGATACTGTTTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR CCA 90 bp TTTCCTGTTCTCTGCCGTCTTCTCTCAGTTCTCCGTCTTCTGCATTACAGGTATTGTAAAATATGTCTGTaGGTTGGGCAAGAGGGAGGG +
Preference number: 4 (lower is better)
Translates to: FPVLCRLLSVLRLLHYRYCKICL*VGQEGG
Trigger: CCCTCCCTCTTGCCCAACCCACAGACATATTTTACA...ATACCTGTAATGCAGAAGACGGAGAACTGAGAGAAGACGGCAGAGAACAGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409354.6
CDS-3UTR TCA 90 bp TTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCCACTGGGCGTCTGTTTTTaGGCGTCCAAGGATAATCTC +
Preference number: 4 (lower is better)
Translates to: LGIYPVMGWLGQMVFLVPLGVCF*ASKDNL
Trigger: GAGATTATCCTTGGACGCTCAAAAACAGACGCCCAG...TGGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS-3UTR TCA 90 bp TTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCCAGCTCCTCCAACTCTTTaGGCGAGTCTCGGAGTTTTT +
Preference number: 4 (lower is better)
Translates to: LGIYPVMGWLGQMVFLVPAPPTL*ASLGVF
Trigger: AAAAACTCCGAGACTCGCTCAAAGAGTTGGAGGAGC...TGGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS-3UTR TCA 90 bp GTGCTAAGAGAGTCACTCTACGGTGAGTTTCATAAAGAATTAGCGAAGAATCTTGCCAAGCATCATCGTTaGCCAGTGGCCACCAGCAAA +
Preference number: 4 (lower is better)
Translates to: VLRESLYGEFHKELAKNLAKHHR*PVATSK
Trigger: TTTGCTGGTGGCCACTGGTCAACGATGATGCTTGGC...AAGATTCTTCGCTAATTCTTTATGAAACTCACCGTAGAGTGACTCTCTTAGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS-3UTR TCA 90 bp GAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCACATCCGGAGTGCTCCACTGTaGACACCTGATAAGGCTGTT +
Preference number: 4 (lower is better)
Translates to: ELVYSPTNSVKVFLFLHIRSAPL*TPDKAV
Trigger: AACAGCCTTATCAGGTGTTCACAGTGGAGCACTCCG...GATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS-3UTR TCA 90 bp CTCAAGCAATTCTTCTGCCTCAGCTTCACAAGCATGTACCACCATGCCTGGCTATGGTATTCTGGTGACTaGCACACACTGGATTTTATT +
Preference number: 4 (lower is better)
Translates to: LKQFFCLSFTSMYHHAWLWYSGD*HTLDFI
Trigger: AATAAAATCCAGTGTGTGTCAGTCACCAGAATACCA...TAGCCAGGCATGGTGGTACATGCTTGTGAAGCTGAGGCAGAAGAATTGCTTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272321.12
ENST00000409199.5
ENST00000409354.6
CDS-3UTR TCA 90 bp GATTTCCTGTTCTCTGCCGTCTTCTCTCAGTTCTCCGTCTTCTGCATTACAGGTTTAGTGGTATTCTGGTaGCTGACACACACTGGATTT +
Preference number: 4 (lower is better)
Translates to: DFLFSAVFSQFSVFCITGLVVFW*LTHTGF
Trigger: AAATCCAGTGTGTGTCAGTCACCAGAATACCACTAA...ACCTGTAATGCAGAAGACGGAGAACTGAGAGAAGACGGCAGAGAACAGGAAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409354.6
CDS-3UTR TCA 90 bp CTCAAGCAATTCTTCTGCCTCAGCTTCACAAGCATGTACCACCATGCCTGGCTACATCAAATAATTTACTaGATTGCAGAGTCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: LKQFFCLSFTSMYHHAWLHQIIY*IAESPW
Trigger: CCAGGGAGACTCTGCAATTCAGTAAATTATTTGATG...TAGCCAGGCATGGTGGTACATGCTTGTGAAGCTGAGGCAGAAGAATTGCTTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272321.12
ENST00000409199.5
ENST00000409354.6
CDS-3UTR TCA 90 bp AATGGTATTTCTAGTTCCAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGCTATCCATTGCATTTaGACAAGACTGCTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: NGISSSRSLRNRHTDFHNAIHCI*TRLLEA
Trigger: TGCCTCCAGCAGTCTTGTTCAAATGCAATGGATAGC...ATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTGGAACTAGAAATACCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS-3UTR TCA 90 bp TTTCCTGTTCTCTGCCGTCTTCTCTCAGTTCTCCGTCTTCTGCATTACAGGTATGTCCTCTTTCAAACCTaGGGAAGAGGAGATCATAGA +
Preference number: 4 (lower is better)
Translates to: FPVLCRLLSVLRLLHYRYVLFQT*GRGDHR
Trigger: TCTATGATCTCCTCTTCCTCAGGTTTGAAAGAGGAC...ATACCTGTAATGCAGAAGACGGAGAACTGAGAGAAGACGGCAGAGAACAGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409354.6
CDS-3UTR TCA 90 bp AATGGTATTTCTAGTTCCAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGAATGTACTGGAAGATaGTGTCTATCAGGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: NGISSSRSLRNRHTDFHNECTGR*CLSGPA
Trigger: AGCTGGGCCTGATAGACATCATCTTCCAGTACATTC...ATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTGGAACTAGAAATACCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS-3UTR GCA 90 bp TTTCTGGAGTTCTCCATTCCTCAGATCCAAGTTTCCATCTGGTATCATTTCCTTCACAGTTTCCTCAGGTaGTACAAAGCAGCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: FLEFSIPQIQVSIWYHFLHSFLR*YKAARV
Trigger: CACCCTGGCTGCTTTGTAGCACCTGAGGAAACTGTG...AAGGAAATGATACCAGATGGAAACTTGGATCTGAGGAATGGAGAACTCCAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS-3UTR GCA 90 bp GCTTGTCTCAAGCTGTGCTTCTCTCTCTGGAGTGAGCTTCTGTCTAAGAAGATGTTCAAAGACCACAGGTaGAGTTCAGTCAAGCAGAAA +
Preference number: 4 (lower is better)
Translates to: ACLKLCFSLWSELLSKKMFKDHR*SSVKQK
Trigger: TTTCTGCTTGACTGAACTGCACCTGTGGTCTTTGAA...CATCTTCTTAGACAGAAGCTCACTCCAGAGAGAGAAGCACAGCTTGAGACAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS-3UTR GCA 90 bp GTATACATGTGCCATGGTGGTGTGCTGCACCCATTAACTCGTCATTTAGCATTAACACACCGACTGTTTTaGATCAGCTCCTCCAACTCT +
Preference number: 4 (lower is better)
Translates to: VYMCHGGVLHPLTRHLALTHRLF*ISSSNS
Trigger: AGAGTTGGAGGAGCTGATGCAAAACAGTCGGTGTGT...TAATGCTAAATGACGAGTTAATGGGTGCAGCACACCACCATGGCACATGTATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS-3UTR GCA 90 bp GCTTGTCTCAAGCTGTGCTTCTCTCTCTGGAGTGAGCTTCTGTCTAAGAAGATGATTTGTTCTTCCATTTaGTCAGCACACACCGACTGT +
Preference number: 4 (lower is better)
Translates to: ACLKLCFSLWSELLSKKMICSSI*SAHTDC
Trigger: ACAGTCGGTGTGTGCTGAGCAAATGGAAGAACAAAT...CATCTTCTTAGACAGAAGCTCACTCCAGAGAGAGAAGCACAGCTTGAGACAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS-3UTR GCA 90 bp GAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCACATCGTGGGTCCCATTCTGTaGGGACAGAACTCAGAACCT +
Preference number: 4 (lower is better)
Translates to: ELVYSPTNSVKVFLFLHIVGPIL*GQNSEP
Trigger: AGGTTCTGAGTTCTGTCCGCACAGAATGGGACCCAC...GATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS-3UTR GCA 90 bp GTATACATGTGCCATGGTGGTGTGCTGCACCCATTAACTCGTCATTTAGCATTAGAATGCATTCATAGATaGAGCTGTCAGCCATGGGCT +
Preference number: 4 (lower is better)
Translates to: VYMCHGGVLHPLTRHLALECIHR*SCQPWA
Trigger: AGCCCATGGCTGACAGCTGCATCTATGAATGCATTC...TAATGCTAAATGACGAGTTAATGGGTGCAGCACACCACCATGGCACATGTATAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS-3UTR GCA 90 bp AAGTTACCACACTATAGTTTCATGGATGCTGTTAGAAGACATGAGACTCCTGAGACTCCCCTTGGTTGCTaGCAACTAGCAGAATGGCAC +
Preference number: 4 (lower is better)
Translates to: KLPHYSFMDAVRRHETPETPLGC*QLAEWH
Trigger: GTGCCATTCTGCTAGTTGGCAGCAACCAAGGGGAGT...CTCAGGAGTCTCATGTCTTCTAACAGCATCCATGAAACTATAGTGTGGTAACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR GCA 90 bp CCTTTCTCCAGAGGGAAACAGTATCTGTGTTCTAAGGGGCAGTCAGGGCAAATTGCCATATCAAAAATTTaGAACTCCCCTTGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: PFSRGKQYLCSKGQSGQIAISKI*NSPWLL
Trigger: CAGCAACCAAGGGGAGTTGCAAATTTTTGATATGGC...AATTTGCCCTGACTGCCCCTTAGAACACAGATACTGTTTCCCTCTGGAGAAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR GCA 90 bp CTCAAGCAATTCTTCTGCCTCAGCTTCACAAGCATGTACCACCATGCCTGGCTAGCTCAGGATGTTTATTaGCTCATAGATCTCATCACA +
Preference number: 4 (lower is better)
Translates to: LKQFFCLSFTSMYHHAWLAQDVY*LIDLIT
Trigger: TGTGATGAGATCTATGAGGCAATAAACATCCTGAGC...TAGCCAGGCATGGTGGTACATGCTTGTGAAGCTGAGGCAGAAGAATTGCTTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272321.12
ENST00000409199.5
ENST00000409354.6
CDS-3UTR GCA 90 bp CTCAAGCAATTCTTCTGCCTCAGCTTCACAAGCATGTACCACCATGCCTGGCTACAGTTCTCCGTCTTCTaGATTACAGGTATTAGTCAT +
Preference number: 4 (lower is better)
Translates to: LKQFFCLSFTSMYHHAWLQFSVF*ITGISH
Trigger: ATGACTAATACCTGTAATGCAGAAGACGGAGAACTG...TAGCCAGGCATGGTGGTACATGCTTGTGAAGCTGAGGCAGAAGAATTGCTTGAG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272321.12
ENST00000409199.5
ENST00000409354.6
CDS-3UTR GCA 90 bp GTGCCATGGTGGTGTGCTGCACCCATTAACTCGTCATTTAGCATTAGGTATATCACATATGTATACATGTaGCATGGTGGTGTGCTGCAC +
Preference number: 4 (lower is better)
Translates to: VPWWCAAPINSSFSIRYITYVYM*HGGVLH
Trigger: GTGCAGCACACCACCATGGCACATGTATACATATGT...GATATACCTAATGCTAAATGACGAGTTAATGGGTGCAGCACACCACCATGGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS-3UTR CCA 90 bp AATGGTATTTCTAGTTCCAGATCCCTGAGGAATCGCCACACTGACTTCCACAATATCATCGTTGACCAGTaGCCACCAGCAAACAACTCT +
Preference number: 4 (lower is better)
Translates to: NGISSSRSLRNRHTDFHNIIVDQ*PPANNS
Trigger: AGAGTTGTTTGCTGGTGGCCACTGGTCAACGATGAT...ATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTGGAACTAGAAATACCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS-3UTR CCA 90 bp TTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCCACCAGGAGGAGTAGATTaGCTCTGTCCTTCTCAGAAG +
Preference number: 4 (lower is better)
Translates to: LGIYPVMGWLGQMVFLVPPGGVD*LCPSQK
Trigger: CTTCTGAGAAGGACAGAGCCAATCTACTCCTCCTGG...TGGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS-3UTR CCA 90 bp GGACAGATACTACCTAGCTGTTCCTGCCTATACCACTCTTCTTACTTTAGAGCTTGCAGCTGTCAGCCATaGGCTCTTTGTCTACACTTA +
Preference number: 4 (lower is better)
Translates to: GQILPSCSCLYHSSYFRACSCQP*ALCLHL
Trigger: TAAGTGTAGACAAAGAGCCCATGGCTGACAGCTGCA...AGCTCTAAAGTAAGAAGAGTGGTATAGGCAGGAACAGCTAGGTAGTATCTGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR CCA 90 bp CTCAAGCAATTCTTCTGCCTCAGCTTCACAAGCATGTACCACCATGCCTGGCTAGTGACTGACACACACTaGATTTTATTCCGAATGCAT +
Preference number: 4 (lower is better)
Translates to: LKQFFCLSFTSMYHHAWLVTDTH*ILFRMH
Trigger: ATGCATTCGGAATAAAATCCAGTGTGTGTCAGTCAC...TAGCCAGGCATGGTGGTACATGCTTGTGAAGCTGAGGCAGAAGAATTGCTTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272321.12
ENST00000409199.5
ENST00000409354.6
CDS-3UTR CCA 90 bp CAACTCTTTGAGCGAGTCTCGGAGTTTTTCTGGGCGTCTGTTTTTGAGCGTCCAGTGACTGACACACACTaGATTTTATTCCGAATGCAT +
Preference number: 4 (lower is better)
Translates to: QLFERVSEFFWASVFERPVTDTH*ILFRMH
Trigger: ATGCATTCGGAATAAAATCCAGTGTGTGTCAGTCAC...TGGACGCTCAAAAACAGACGCCCAGAAAAACTCCGAGACTCGCTCAAAGAGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS-3UTR CCA 90 bp AATGGTATTTCTAGTTCCAGATCCCTGAGGAATCGCCACACTGACTTCCACAATATGGCACCACTTGGGTaGCAGCTTATTAATGAAGGC +
Preference number: 4 (lower is better)
Translates to: NGISSSRSLRNRHTDFHNMAPLG*QLINEG
Trigger: GCCTTCATTAATAAGCTGCCACCCAAGTGGTGCCAT...ATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTGGAACTAGAAATACCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS-3UTR CCA 90 bp AATGGTATTTCTAGTTCCAGATCCCTGAGGAATCGCCACACTGACTTCCACAATATTTGCAACTCCCCTTaGTTGCTGCCAACTAGCAGA +
Preference number: 4 (lower is better)
Translates to: NGISSSRSLRNRHTDFHNICNSP*LLPTSR
Trigger: TCTGCTAGTTGGCAGCAACCAAGGGGAGTTGCAAAT...ATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTGGAACTAGAAATACCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS-3UTR CCA 90 bp CTCAAGCAATTCTTCTGCCTCAGCTTCACAAGCATGTACCACCATGCCTGGCTATCTTCAGCCAACAGTTaGATGTTAATAGGGGATAGA +
Preference number: 4 (lower is better)
Translates to: LKQFFCLSFTSMYHHAWLSSANS*MLIGDR
Trigger: TCTATCCCCTATTAACATCCAACTGTTGGCTGAAGA...TAGCCAGGCATGGTGGTACATGCTTGTGAAGCTGAGGCAGAAGAATTGCTTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272321.12
ENST00000409199.5
ENST00000409354.6
CDS-3UTR CCA 90 bp CTCAAGCAATTCTTCTGCCTCAGCTTCACAAGCATGTACCACCATGCCTGGCTATTCTGTCTAAGAAGATaGTTTACAATGGCGCTCATG +
Preference number: 4 (lower is better)
Translates to: LKQFFCLSFTSMYHHAWLFCLRR*FTMALM
Trigger: CATGAGCGCCATTGTAAACCATCTTCTTAGACAGAA...TAGCCAGGCATGGTGGTACATGCTTGTGAAGCTGAGGCAGAAGAATTGCTTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272321.12
ENST00000409199.5
ENST00000409354.6
CDS-3UTR CCA 90 bp GGACAGATACTACCTAGCTGTTCCTGCCTATACCACTCTTCTTACTTTAGAGCTCTGTGCTTCTCTCTCTaGAGTGAGCTTCTGTCTAAG +
Preference number: 4 (lower is better)
Translates to: GQILPSCSCLYHSSYFRALCFSL*SELLSK
Trigger: CTTAGACAGAAGCTCACTCCAGAGAGAGAAGCACAG...AGCTCTAAAGTAAGAAGAGTGGTATAGGCAGGAACAGCTAGGTAGTATCTGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR CCA 90 bp GTATACATGTGCCATGGTGGTGTGCTGCACCCATTAACTCGTCATTTAGCATTACTGTGCTTCTCTCTCTaGAGTGAGCTTCTGTCTAAG +
Preference number: 4 (lower is better)
Translates to: VYMCHGGVLHPLTRHLALLCFSL*SELLSK
Trigger: CTTAGACAGAAGCTCACTCCAGAGAGAGAAGCACAG...TAATGCTAAATGACGAGTTAATGGGTGCAGCACACCACCATGGCACATGTATAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS-3UTR CCA 90 bp ATTCTTCAAAGACCACAGGTGCAGTTCAGTCAAGCAGAAAGACATCTGATGGCACTGTGCTTCTCTCTCTaGAGTGAGCTTCTGTCTAAG +
Preference number: 4 (lower is better)
Translates to: ILQRPQVQFSQAERHLMALCFSL*SELLSK
Trigger: CTTAGACAGAAGCTCACTCCAGAGAGAGAAGCACAG...TGCCATCAGATGTCTTTCTGCTTGACTGAACTGCACCTGTGGTCTTTGAAGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS-3UTR CCA 90 bp TTTCCTGTTCTCTGCCGTCTTCTCTCAGTTCTCCGTCTTCTGCATTACAGGTATCAGAAGTGGTCTTGTTaGAGCATAGAAGGTTCCAAG +
Preference number: 4 (lower is better)
Translates to: FPVLCRLLSVLRLLHYRYQKWSC*SIEGSK
Trigger: CTTGGAACCTTCTATGCTCCAACAAGACCACTTCTG...ATACCTGTAATGCAGAAGACGGAGAACTGAGAGAAGACGGCAGAGAACAGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409354.6
CDS-3UTR CCA 90 bp TGTGCTTCTCTCTCTGGAGTGAGCTTCTGTCTAAGAAGATGGTTTACAATGGCGCAGAAGTGGTCTTGTTaGAGCATAGAAGGTTCCAAG +
Preference number: 4 (lower is better)
Translates to: CASLSGVSFCLRRWFTMAQKWSC*SIEGSK
Trigger: CTTGGAACCTTCTATGCTCCAACAAGACCACTTCTG...CGCCATTGTAAACCATCTTCTTAGACAGAAGCTCACTCCAGAGAGAGAAGCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS-3UTR CCA 90 bp CTGCTGGAGGCATCAAATAATTTACTGAATTGCAGAGTCTCCCTGGGTAAGCGGAGTGGAATCCAGAAGTaGTCTTGTTGGAGCATAGAA +
Preference number: 4 (lower is better)
Translates to: LLEASNNLLNCRVSLGKRSGIQK*SCWSIE
Trigger: TTCTATGCTCCAACAAGACCACTTCTGGATTCCACT...CCGCTTACCCAGGGAGACTCTGCAATTCAGTAAATTATTTGATGCCTCCAGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS-3UTR CCA 90 bp GGACAGATACTACCTAGCTGTTCCTGCCTATACCACTCTTCTTACTTTAGAGCTCTAGTCTTGAACTCCTaGGCTCAAGTGATCCTTCAG +
Preference number: 4 (lower is better)
Translates to: GQILPSCSCLYHSSYFRALVLNS*AQVILQ
Trigger: CTGAAGGATCACTTGAGCCCAGGAGTTCAAGACTAG...AGCTCTAAAGTAAGAAGAGTGGTATAGGCAGGAACAGCTAGGTAGTATCTGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR CCA 90 bp GTTCTAAGGGGCAGTCAGGGCAAATTACTCATAGCAGTAATTCGAGAGAACCATGTGAGCCACCGTGCCTaGCCTATAGATGTCTATAAT +
Preference number: 4 (lower is better)
Translates to: VLRGSQGKLLIAVIRENHVSHRA*PIDVYN
Trigger: ATTATAGACATCTATAGGCCAGGCACGGTGGCTCAC...ATGGTTCTCTCGAATTACTGCTATGAGTAATTTGCCCTGACTGCCCCTTAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR CCA 90 bp AGTCCTTGCCCATGCCTGTGTCCTGAATGGTATTGCCTAGGTTTTCTTCTAGGGTCCTTTGCCCACTTTTaGATGGGGTTGTTTGTTTTT +
Preference number: 4 (lower is better)
Translates to: SPCPCLCPEWYCLGFLLGSFAHF*MGLFVF
Trigger: AAAAACAAACAACCCCATCCAAAAGTGGGCAAAGGA...CCCTAGAAGAAAACCTAGGCAATACCATTCAGGACACAGGCATGGGCAAGGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS-3UTR CCA 90 bp AATGGTATTTCTAGTTCCAGATCCCTGAGGAATCGCCACACTGACTTCCACAATTGTATACATGTGCCATaGTGGTGTGCTGCACCCATT +
Preference number: 4 (lower is better)
Translates to: NGISSSRSLRNRHTDFHNCIHVP*WCAAPI
Trigger: AATGGGTGCAGCACACCACCATGGCACATGTATACA...ATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTGGAACTAGAAATACCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409562.7
3UTR CAA 72 bp CCAGAGTGTCCCAGTTCATGCTGCTCAGGATGTTTATaGCCTCATAGATCTCATCACAGTGAATGTACTGGA +
Preference number: 4 (lower is better)
Translates to: PECPSSCCSGCL*PHRSHHSECTG
Trigger: TCCAGTACATTCACTGTGATGAGATCTATGAGGCAATAAACATCCTGAGCAGCATGAACTGGGACACTCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS-3UTR TCA 90 bp AAGTTACCACACTATAGTTTCATGGATGCTGTTAGAAGACATGAGACTCCTGAGCTGGGCGTCTGTTTTTaGGCGTCCAAGGATAATCTC +
Preference number: 4 (lower is better)
Translates to: KLPHYSFMDAVRRHETPELGVCF*ASKDNL
Trigger: GAGATTATCCTTGGACGCTCAAAAACAGACGCCCAG...CTCAGGAGTCTCATGTCTTCTAACAGCATCCATGAAACTATAGTGTGGTAACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR TCA 90 bp CTCAAGCAATTCTTCTGCCTCAGCTTCACAAGCATGTACCACCATGCCTGGCTACTTATAATCCAAGGCTaGGAGTTTTTCCAGTCTTTT +
Preference number: 4 (lower is better)
Translates to: LKQFFCLSFTSMYHHAWLLIIQG*EFFQSF
Trigger: AAAAGACTGGAAAAACTCTCAGCCTTGGATTATAAG...TAGCCAGGCATGGTGGTACATGCTTGTGAAGCTGAGGCAGAAGAATTGCTTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000272321.12
ENST00000409199.5
CDS-3UTR TCA 90 bp CTCAAGCAATTCTTCTGCCTCAGCTTCACAAGCATGTACCACCATGCCTGGCTACAAACAACTCTATCATaGACACAGTTGATAGCTAGA +
Preference number: 4 (lower is better)
Translates to: LKQFFCLSFTSMYHHAWLQTTLS*TQLIAR
Trigger: TCTAGCTATCAACTGTGTTCATGATAGAGTTGTTTG...TAGCCAGGCATGGTGGTACATGCTTGTGAAGCTGAGGCAGAAGAATTGCTTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272321.12
ENST00000409199.5
ENST00000409354.6
CDS-3UTR TCA 90 bp GAACTCAAATCTCATATAAAAGTTGATAAGCATGCCTGCCCCTTTCTCCAGAGGGCTATCCATTGCATTTaGACAAGACTGCTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: ELKSHIKVDKHACPFLQRAIHCI*TRLLEA
Trigger: TGCCTCCAGCAGTCTTGTTCAAATGCAATGGATAGC...CCTCTGGAGAAAGGGGCAGGCATGCTTATCAACTTTTATATGAGATTTGAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR GCA 90 bp GGGAAACAGTATCTGTGTTCTAAGGGGCAGTCAGGGCAAATTACTCATAGCAGTTTCAAAGACCACAGGTaGAGTTCAGTCAAGCAGAAA +
Preference number: 4 (lower is better)
Translates to: GKQYLCSKGQSGQITHSSFKDHR*SSVKQK
Trigger: TTTCTGCTTGACTGAACTGCACCTGTGGTCTTTGAA...ACTGCTATGAGTAATTTGCCCTGACTGCCCCTTAGAACACAGATACTGTTTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR GCA 90 bp TTTCCTGTTCTCTGCCGTCTTCTCTCAGTTCTCCGTCTTCTGCATTACAGGTATGCCATATCAAAAATTTaGAACTCCCCTTGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: FPVLCRLLSVLRLLHYRYAISKI*NSPWLL
Trigger: CAGCAACCAAGGGGAGTTGCAAATTTTTGATATGGC...ATACCTGTAATGCAGAAGACGGAGAACTGAGAGAAGACGGCAGAGAACAGGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409354.6
CDS-3UTR GCA 90 bp GTGCCATGGTGGTGTGCTGCACCCATTAACTCGTCATTTAGCATTAGGTATATCGCCATATCAAAAATTTaGAACTCCCCTTGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: VPWWCAAPINSSFSIRYIAISKI*NSPWLL
Trigger: CAGCAACCAAGGGGAGTTGCAAATTTTTGATATGGC...GATATACCTAATGCTAAATGACGAGTTAATGGGTGCAGCACACCACCATGGCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS-3UTR GCA 90 bp TGTGCTTCTCTCTCTGGAGTGAGCTTCTGTCTAAGAAGATGGTTTACAATGGCGGCCATATCAAAAATTTaGAACTCCCCTTGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: CASLSGVSFCLRRWFTMAAISKI*NSPWLL
Trigger: CAGCAACCAAGGGGAGTTGCAAATTTTTGATATGGC...CGCCATTGTAAACCATCTTCTTAGACAGAAGCTCACTCCAGAGAGAGAAGCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS-3UTR GCA 90 bp CTCAAGCAATTCTTCTGCCTCAGCTTCACAAGCATGTACCACCATGCCTGGCTAAATAATTTACTGAATTaGAGAGTCTCCCTGGGTAAG +
Preference number: 4 (lower is better)
Translates to: LKQFFCLSFTSMYHHAWLNNLLN*RVSLGK
Trigger: CTTACCCAGGGAGACTCTGCAATTCAGTAAATTATT...TAGCCAGGCATGGTGGTACATGCTTGTGAAGCTGAGGCAGAAGAATTGCTTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272321.12
ENST00000409199.5
ENST00000409354.6
CDS-3UTR GCA 90 bp AGTCCTTGCCCATGCCTGTGTCCTGAATGGTATTGCCTAGGTTTTCTTCTAGGGAATAATTTACTGAATTaGAGAGTCTCCCTGGGTAAG +
Preference number: 4 (lower is better)
Translates to: SPCPCLCPEWYCLGFLLGNNLLN*RVSLGK
Trigger: CTTACCCAGGGAGACTCTGCAATTCAGTAAATTATT...CCCTAGAAGAAAACCTAGGCAATACCATTCAGGACACAGGCATGGGCAAGGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS-3UTR GCA 90 bp CTCAAGCAATTCTTCTGCCTCAGCTTCACAAGCATGTACCACCATGCCTGGCTAGCATTTGAACAAGACTaGTGGAGGCATCAAATAATT +
Preference number: 4 (lower is better)
Translates to: LKQFFCLSFTSMYHHAWLAFEQD*WRHQII
Trigger: AATTATTTGATGCCTCCAGCAGTCTTGTTCAAATGC...TAGCCAGGCATGGTGGTACATGCTTGTGAAGCTGAGGCAGAAGAATTGCTTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272321.12
ENST00000409199.5
ENST00000409354.6
CDS-3UTR GCA 90 bp TGCATTCATAGATGCAGCTGTCAGCCATGGGCTCTTTGTCTACACTTACGGAGTGCTCAGGATGTTTATTaGCTCATAGATCTCATCACA +
Preference number: 4 (lower is better)
Translates to: CIHRCSCQPWALCLHLRSAQDVY*LIDLIT
Trigger: TGTGATGAGATCTATGAGGCAATAAACATCCTGAGC...ACTCCGTAAGTGTAGACAAAGAGCCCATGGCTGACAGCTGCATCTATGAATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS-3UTR GCA 90 bp GGACAGATACTACCTAGCTGTTCCTGCCTATACCACTCTTCTTACTTTAGAGCTGAGTGTCCCAGTTCATaGTGCTCAGGATGTTTATTG +
Preference number: 4 (lower is better)
Translates to: GQILPSCSCLYHSSYFRAECPSS*CSGCLL
Trigger: CAATAAACATCCTGAGCAGCATGAACTGGGACACTC...AGCTCTAAAGTAAGAAGAGTGGTATAGGCAGGAACAGCTAGGTAGTATCTGTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR GCA 90 bp GAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCACATCGCTTGTCTCAAGCTGTaGTTCTCTCTCTGGAGTGAG +
Preference number: 4 (lower is better)
Translates to: ELVYSPTNSVKVFLFLHIACLKL*FSLWSE
Trigger: CTCACTCCAGAGAGAGAAGCACAGCTTGAGACAAGC...GATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS-3UTR GCA 90 bp GTGCCATGGTGGTGTGCTGCACCCATTAACTCGTCATTTAGCATTAGGTATATCTCTGTTCATATCCTTTaGCCACTTTTGGATGGGGTT +
Preference number: 4 (lower is better)
Translates to: VPWWCAAPINSSFSIRYISVHIL*PLLDGV
Trigger: AACCCCATCCAAAAGTGGGCAAAGGATATGAACAGA...GATATACCTAATGCTAAATGACGAGTTAATGGGTGCAGCACACCACCATGGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS-3UTR CCA 90 bp CCTTTCTCCAGAGGGAAACAGTATCTGTGTTCTAAGGGGCAGTCAGGGCAAATTATGCTCTGTCGCTGGTaGATCTTTCTTGTCATAATA +
Preference number: 4 (lower is better)
Translates to: PFSRGKQYLCSKGQSGQIMLCRW*IFLVII
Trigger: TATTATGACAAGAAAGATCCACCAGCGACAGAGCAT...AATTTGCCCTGACTGCCCCTTAGAACACAGATACTGTTTCCCTCTGGAGAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR CCA 90 bp GTATACATGTGCCATGGTGGTGTGCTGCACCCATTAACTCGTCATTTAGCATTAACCATGCTCTGTCGCTaGTGGATCTTTCTTGTCATA +
Preference number: 4 (lower is better)
Translates to: VYMCHGGVLHPLTRHLALTMLCR*WIFLVI
Trigger: TATGACAAGAAAGATCCACCAGCGACAGAGCATGGT...TAATGCTAAATGACGAGTTAATGGGTGCAGCACACCACCATGGCACATGTATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS-3UTR CCA 90 bp TTTCTGGAGTTCTCCATTCCTCAGATCCAAGTTTCCATCTGGTATCATTTCCTTCCAGGAGGAGTAGATTaGCTCTGTCCTTCTCAGAAG +
Preference number: 4 (lower is better)
Translates to: FLEFSIPQIQVSIWYHFLPGGVD*LCPSQK
Trigger: CTTCTGAGAAGGACAGAGCCAATCTACTCCTCCTGG...AAGGAAATGATACCAGATGGAAACTTGGATCTGAGGAATGGAGAACTCCAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS-3UTR CCA 90 bp GAACTCAAATCTCATATAAAAGTTGATAAGCATGCCTGCCCCTTTCTCCAGAGGATGGCACCACTTGGGTaGCAGCTTATTAATGAAGGC +
Preference number: 4 (lower is better)
Translates to: ELKSHIKVDKHACPFLQRMAPLG*QLINEG
Trigger: GCCTTCATTAATAAGCTGCCACCCAAGTGGTGCCAT...CCTCTGGAGAAAGGGGCAGGCATGCTTATCAACTTTTATATGAGATTTGAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR CCA 90 bp GATTTCCTGTTCTCTGCCGTCTTCTCTCAGTTCTCCGTCTTCTGCATTACAGGTTCTTCAGCCAACAGTTaGATGTTAATAGGGGATAGA +
Preference number: 4 (lower is better)
Translates to: DFLFSAVFSQFSVFCITGSSANS*MLIGDR
Trigger: TCTATCCCCTATTAACATCCAACTGTTGGCTGAAGA...ACCTGTAATGCAGAAGACGGAGAACTGAGAGAAGACGGCAGAGAACAGGAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409354.6
CDS-3UTR CCA 90 bp TACGGTGAGTTTCATAAAGAATTAGCGAAGAATCTTCACAGCCCAGAATCAGTTATTGCAGAGTCTCCCTaGGTAAGCGGTCTTCAGCCA +
Preference number: 4 (lower is better)
Translates to: YGEFHKELAKNLHSPESVIAESP*VSGLQP
Trigger: TGGCTGAAGACCGCTTACCCAGGGAGACTCTGCAAT...AACTGATTCTGGGCTGTGAAGATTCTTCGCTAATTCTTTATGAAACTCACCGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS-3UTR CCA 90 bp GTGCTAAGAGAGTCACTCTACGGTGAGTTTCATAAAGAATTAGCGAAGAATCTTATGCTGATAAAGCACTaGTGGCCCAGAGTGTCCCAG +
Preference number: 4 (lower is better)
Translates to: VLRESLYGEFHKELAKNLMLIKH*WPRVSQ
Trigger: CTGGGACACTCTGGGCCACCAGTGCTTTATCAGCAT...AAGATTCTTCGCTAATTCTTTATGAAACTCACCGTAGAGTGACTCTCTTAGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS-3UTR CCA 90 bp TGTGCTTCTCTCTCTGGAGTGAGCTTCTGTCTAAGAAGATGGTTTACAATGGCGGTCCAGAATTTATCATaGTTTTCTGTCTCGGGAGTG +
Preference number: 4 (lower is better)
Translates to: CASLSGVSFCLRRWFTMAVQNLS*FSVSGV
Trigger: CACTCCCGAGACAGAAAACCATGATAAATTCTGGAC...CGCCATTGTAAACCATCTTCTTAGACAGAAGCTCACTCCAGAGAGAGAAGCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS-3UTR TCA 90 bp GGGAAACAGTATCTGTGTTCTAAGGGGCAGTCAGGGCAAATTACTCATAGCAGTGAACCAAAAAGGAGCTaGCAGACATATTTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: GKQYLCSKGQSGQITHSSEPKRS*QTYLFF
Trigger: GAAGAACAAATATGTCTGTCAGCTCCTTTTTGGTTC...ACTGCTATGAGTAATTTGCCCTGACTGCCCCTTAGAACACAGATACTGTTTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR TCA 90 bp TTTCCTGTTCTCTGCCGTCTTCTCTCAGTTCTCCGTCTTCTGCATTACAGGTATTGGTATTCTGGTGACTaGCACACACTGGATTTTATT +
Preference number: 4 (lower is better)
Translates to: FPVLCRLLSVLRLLHYRYWYSGD*HTLDFI
Trigger: AATAAAATCCAGTGTGTGTCAGTCACCAGAATACCA...ATACCTGTAATGCAGAAGACGGAGAACTGAGAGAAGACGGCAGAGAACAGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409354.6
CDS-3UTR TCA 90 bp GGACAGATACTACCTAGCTGTTCCTGCCTATACCACTCTTCTTACTTTAGAGCTTTAGTGGTATTCTGGTaGCTGACACACACTGGATTT +
Preference number: 4 (lower is better)
Translates to: GQILPSCSCLYHSSYFRALVVFW*LTHTGF
Trigger: AAATCCAGTGTGTGTCAGTCACCAGAATACCACTAA...AGCTCTAAAGTAAGAAGAGTGGTATAGGCAGGAACAGCTAGGTAGTATCTGTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR TCA 90 bp ATTCTTCAAAGACCACAGGTGCAGTTCAGTCAAGCAGAAAGACATCTGATGGCATTAGTGGTATTCTGGTaGCTGACACACACTGGATTT +
Preference number: 4 (lower is better)
Translates to: ILQRPQVQFSQAERHLMALVVFW*LTHTGF
Trigger: AAATCCAGTGTGTGTCAGTCACCAGAATACCACTAA...TGCCATCAGATGTCTTTCTGCTTGACTGAACTGCACCTGTGGTCTTTGAAGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS-3UTR TCA 90 bp ATTTCCTTTAGCATTTCTTGCAGTGAAGGTCTGCTGGCAACAAAACCTCATTTTCATTCCTGCAGCAGCTaGTGGCCTTTGACTTTAGTG +
Preference number: 4 (lower is better)
Translates to: ISFSISCSEGLLATKPHFHSCSS*WPLTLV
Trigger: CACTAAAGTCAAAGGCCATCAGCTGCTGCAGGAATG...AAAATGAGGTTTTGTTGCCAGCAGACCTTCACTGCAAGAAATGCTAAAGGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS-3UTR TCA 90 bp GTTCTAAGGGGCAGTCAGGGCAAATTACTCATAGCAGTAATTCGAGAGAACCATAACCCCAGAGGTTATTaGTTCTGCATCAATGTCACT +
Preference number: 4 (lower is better)
Translates to: VLRGSQGKLLIAVIRENHNPRGY*FCINVT
Trigger: AGTGACATTGATGCAGAATCAATAACCTCTGGGGTT...ATGGTTCTCTCGAATTACTGCTATGAGTAATTTGCCCTGACTGCCCCTTAGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR GCA 90 bp TCCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGACACAGTTTCCTCAGGTaGTACAAAGCAGCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: STLMVVSFAVQKLFSLIRHSFLR*YKAARV
Trigger: CACCCTGGCTGCTTTGTAGCACCTGAGGAAACTGTG...TCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS-3UTR GCA 90 bp ATTCTTCAAAGACCACAGGTGCAGTTCAGTCAAGCAGAAAGACATCTGATGGCATTTTCTAAGTTACCATaGTCTGTCGCTGGTGGATCT +
Preference number: 4 (lower is better)
Translates to: ILQRPQVQFSQAERHLMAFSKLP*SVAGGS
Trigger: AGATCCACCAGCGACAGAGCATGGTAACTTAGAAAA...TGCCATCAGATGTCTTTCTGCTTGACTGAACTGCACCTGTGGTCTTTGAAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS-3UTR GCA 90 bp TTTCTGGAGTTCTCCATTCCTCAGATCCAAGTTTCCATCTGGTATCATTTCCTTACACACCGACTGTTTTaGATCAGCTCCTCCAACTCT +
Preference number: 4 (lower is better)
Translates to: FLEFSIPQIQVSIWYHFLTHRLF*ISSSNS
Trigger: AGAGTTGGAGGAGCTGATGCAAAACAGTCGGTGTGT...AAGGAAATGATACCAGATGGAAACTTGGATCTGAGGAATGGAGAACTCCAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS-3UTR GCA 90 bp GGACAGATACTACCTAGCTGTTCCTGCCTATACCACTCTTCTTACTTTAGAGCTATTTGTTCTTCCATTTaGTCAGCACACACCGACTGT +
Preference number: 4 (lower is better)
Translates to: GQILPSCSCLYHSSYFRAICSSI*SAHTDC
Trigger: ACAGTCGGTGTGTGCTGAGCAAATGGAAGAACAAAT...AGCTCTAAAGTAAGAAGAGTGGTATAGGCAGGAACAGCTAGGTAGTATCTGTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR GCA 90 bp AATGGTATTTCTAGTTCCAGATCCCTGAGGAATCGCCACACTGACTTCCACAATATTTGTTCTTCCATTTaGTCAGCACACACCGACTGT +
Preference number: 4 (lower is better)
Translates to: NGISSSRSLRNRHTDFHNICSSI*SAHTDC
Trigger: ACAGTCGGTGTGTGCTGAGCAAATGGAAGAACAAAT...ATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTGGAACTAGAAATACCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS-3UTR GCA 90 bp GAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCACATCGATAAGGCTGTTTGGTaGCAAAGCGAACATCCAGTG +
Preference number: 4 (lower is better)
Translates to: ELVYSPTNSVKVFLFLHIDKAVW*QSEHPV
Trigger: CACTGGATGTTCGCTTTGGCACCAAACAGCCTTATC...GATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS-3UTR GCA 90 bp TCCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGAACTCCCCTTGGTTGCTaGCAACTAGCAGAATGGCAC +
Preference number: 4 (lower is better)
Translates to: STLMVVSFAVQKLFSLIRTPLGC*QLAEWH
Trigger: GTGCCATTCTGCTAGTTGGCAGCAACCAAGGGGAGT...TCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS-3UTR GCA 90 bp TTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCCAGAGTGTCCCAGTTCATaGTGCTCAGGATGTTTATTG +
Preference number: 4 (lower is better)
Translates to: LGIYPVMGWLGQMVFLVPECPSS*CSGCLL
Trigger: CAATAAACATCCTGAGCAGCATGAACTGGGACACTC...TGGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS-3UTR GCA 90 bp TTTCCTGTTCTCTGCCGTCTTCTCTCAGTTCTCCGTCTTCTGCATTACAGGTATCAGTTCTCCGTCTTCTaGATTACAGGTATTAGTCAT +
Preference number: 4 (lower is better)
Translates to: FPVLCRLLSVLRLLHYRYQFSVF*ITGISH
Trigger: ATGACTAATACCTGTAATGCAGAAGACGGAGAACTG...ATACCTGTAATGCAGAAGACGGAGAACTGAGAGAAGACGGCAGAGAACAGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409354.6
CDS-3UTR GCA 90 bp GTGAACCTGTCAGTGCTAGGACAGATACTACCTAGCTGTTCCTGCCTATACCACTACTTACGATCACTTTaGTGTTATGCTGCATGTTTT +
Preference number: 4 (lower is better)
Translates to: VNLSVLGQILPSCSCLYHYLRSL*CYAACF
Trigger: AAAACATGCAGCATAACAGCAAAGTGATCGTAAGTA...GTGGTATAGGCAGGAACAGCTAGGTAGTATCTGTCCTAGCACTGACAGGTTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR GCA 90 bp TGCATTCATAGATGCAGCTGTCAGCCATGGGCTCTTTGTCTACACTTACGGAGTTGCACATACTATGTATaGCCTTCACTACATAGTAGA +
Preference number: 4 (lower is better)
Translates to: CIHRCSCQPWALCLHLRSCTYYV*PSLHSR
Trigger: TCTACTATGTAGTGAAGGGCATACATAGTATGTGCA...ACTCCGTAAGTGTAGACAAAGAGCCCATGGCTGACAGCTGCATCTATGAATGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS-3UTR GCA 90 bp GAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCACATCTCCCATTCTGTAGGTTaGCTGTCCACTCTGATGGTA +
Preference number: 4 (lower is better)
Translates to: ELVYSPTNSVKVFLFLHISHSVG*LSTLMV
Trigger: TACCATCAGAGTGGACAGGCAACCTACAGAATGGGA...GATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS-3UTR CCA 90 bp CTCAAGCAATTCTTCTGCCTCAGCTTCACAAGCATGTACCACCATGCCTGGCTATGTTGTCTTGTTTATTaGGCCGGGTATTTCATAATA +
Preference number: 4 (lower is better)
Translates to: LKQFFCLSFTSMYHHAWLCCLVY*AGYFII
Trigger: TATTATGAAATACCCGGCCCAATAAACAAGACAACA...TAGCCAGGCATGGTGGTACATGCTTGTGAAGCTGAGGCAGAAGAATTGCTTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272321.12
ENST00000409199.5
ENST00000409354.6
CDS-3UTR CCA 90 bp CTGCTGGCAACAAAACCTCATTTTTGTTTATTCGGTGATACTCCCTCTTTCCAATGCAGCTGTCAGCCATaGGCTCTTTGTCTACACTTA +
Preference number: 4 (lower is better)
Translates to: LLATKPHFCLFGDTPSFQCSCQP*ALCLHL
Trigger: TAAGTGTAGACAAAGAGCCCATGGCTGACAGCTGCA...TTGGAAAGAGGGAGTATCACCGAATAAACAAAAATGAGGTTTTGTTGCCAGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS-3UTR CCA 90 bp TGTGCTTCTCTCTCTGGAGTGAGCTTCTGTCTAAGAAGATGGTTTACAATGGCGTCTTCAGCCAACAGTTaGATGTTAATAGGGGATAGA +
Preference number: 4 (lower is better)
Translates to: CASLSGVSFCLRRWFTMASSANS*MLIGDR
Trigger: TCTATCCCCTATTAACATCCAACTGTTGGCTGAAGA...CGCCATTGTAAACCATCTTCTTAGACAGAAGCTCACTCCAGAGAGAGAAGCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS-3UTR CCA 90 bp CTCAAGCAATTCTTCTGCCTCAGCTTCACAAGCATGTACCACCATGCCTGGCTATTTGAACAAGACTGCTaGAGGCATCAAATAATTTAC +
Preference number: 4 (lower is better)
Translates to: LKQFFCLSFTSMYHHAWLFEQDC*RHQIIY
Trigger: GTAAATTATTTGATGCCTCCAGCAGTCTTGTTCAAA...TAGCCAGGCATGGTGGTACATGCTTGTGAAGCTGAGGCAGAAGAATTGCTTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272321.12
ENST00000409199.5
ENST00000409354.6
CDS-3UTR CCA 90 bp TCCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGACTGATAAAGCACTGGTaGCCCAGAGTGTCCCAGTTC +
Preference number: 4 (lower is better)
Translates to: STLMVVSFAVQKLFSLIRLIKHW*PRVSQF
Trigger: GAACTGGGACACTCTGGGCCACCAGTGCTTTATCAG...TCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS-3UTR CCA 90 bp TCCAGAGGGAAACAGTATCTGTGTTCTAAGGGGCAGTCAGGGCAAATTACTCATTTCTGTCTAAGAAGATaGTTTACAATGGCGCTCATG +
Preference number: 4 (lower is better)
Translates to: SRGKQYLCSKGQSGQITHFCLRR*FTMALM
Trigger: CATGAGCGCCATTGTAAACCATCTTCTTAGACAGAA...ATGAGTAATTTGCCCTGACTGCCCCTTAGAACACAGATACTGTTTCCCTCTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR CCA 90 bp GTGCCATGGTGGTGTGCTGCACCCATTAACTCGTCATTTAGCATTAGGTATATCTTCTGTCTAAGAAGATaGTTTACAATGGCGCTCATG +
Preference number: 4 (lower is better)
Translates to: VPWWCAAPINSSFSIRYIFCLRR*FTMALM
Trigger: CATGAGCGCCATTGTAAACCATCTTCTTAGACAGAA...GATATACCTAATGCTAAATGACGAGTTAATGGGTGCAGCACACCACCATGGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS-3UTR CCA 90 bp GTATACATGTGCCATGGTGGTGTGCTGCACCCATTAACTCGTCATTTAGCATTAAGTGGAATCCAGAAGTaGTCTTGTTGGAGCATAGAA +
Preference number: 4 (lower is better)
Translates to: VYMCHGGVLHPLTRHLALSGIQK*SCWSIE
Trigger: TTCTATGCTCCAACAAGACCACTTCTGGATTCCACT...TAATGCTAAATGACGAGTTAATGGGTGCAGCACACCACCATGGCACATGTATAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS-3UTR CCA 90 bp CTCAAGCAATTCTTCTGCCTCAGCTTCACAAGCATGTACCACCATGCCTGGCTATTTACCCGGAAAATCTaGAGAAAATTCTGCAATCTT +
Preference number: 4 (lower is better)
Translates to: LKQFFCLSFTSMYHHAWLFTRKI*RKFCNL
Trigger: AAGATTGCAGAATTTTCTCCAGATTTTCCGGGTAAA...TAGCCAGGCATGGTGGTACATGCTTGTGAAGCTGAGGCAGAAGAATTGCTTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR CCA 90 bp GTATACATGTGCCATGGTGGTGTGCTGCACCCATTAACTCGTCATTTAGCATTACCAGTCTATCATTGTTaGACACTTAGGTTGGTTCCA +
Preference number: 4 (lower is better)
Translates to: VYMCHGGVLHPLTRHLALPVYHC*TLRLVP
Trigger: TGGAACCAACCTAAGTGTCCAACAATGATAGACTGG...TAATGCTAAATGACGAGTTAATGGGTGCAGCACACCACCATGGCACATGTATAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS-3UTR TCA 90 bp GGACAGATACTACCTAGCTGTTCCTGCCTATACCACTCTTCTTACTTTAGAGCTTGGTATTCTGGTGACTaGCACACACTGGATTTTATT +
Preference number: 4 (lower is better)
Translates to: GQILPSCSCLYHSSYFRAWYSGD*HTLDFI
Trigger: AATAAAATCCAGTGTGTGTCAGTCACCAGAATACCA...AGCTCTAAAGTAAGAAGAGTGGTATAGGCAGGAACAGCTAGGTAGTATCTGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR TCA 90 bp GGACAGATACTACCTAGCTGTTCCTGCCTATACCACTCTTCTTACTTTAGAGCTCATCAAATAATTTACTaGATTGCAGAGTCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: GQILPSCSCLYHSSYFRAHQIIY*IAESPW
Trigger: CCAGGGAGACTCTGCAATTCAGTAAATTATTTGATG...AGCTCTAAAGTAAGAAGAGTGGTATAGGCAGGAACAGCTAGGTAGTATCTGTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR TCA 90 bp GAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCACATCGTCCTCTTTCAAACCTaGGGAAGAGGAGATCATAGA +
Preference number: 4 (lower is better)
Translates to: ELVYSPTNSVKVFLFLHIVLFQT*GRGDHR
Trigger: TCTATGATCTCCTCTTCCTCAGGTTTGAAAGAGGAC...GATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS-3UTR TCA 90 bp GGACAGATACTACCTAGCTGTTCCTGCCTATACCACTCTTCTTACTTTAGAGCTTACACCAGACCAAAGTaGATCATTTTGAGAGAACCA +
Preference number: 4 (lower is better)
Translates to: GQILPSCSCLYHSSYFRAYTRPK*IILREP
Trigger: TGGTTCTCTCAAAATGATTCACTTTGGTCTGGTGTA...AGCTCTAAAGTAAGAAGAGTGGTATAGGCAGGAACAGCTAGGTAGTATCTGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR TCA 90 bp TTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCCAATTCCCACCTATGAGTaGGAACATATGGTGTTTGGT +
Preference number: 4 (lower is better)
Translates to: LGIYPVMGWLGQMVFLVPIPTYE*EHMVFG
Trigger: ACCAAACACCATATGTTCTCACTCATAGGTGGGAAT...TGGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS-3UTR GCA 90 bp TACGGTGAGTTTCATAAAGAATTAGCGAAGAATCTTCACAGCCCAGAATCAGTTGAATGCATTCATAGATaGAGCTGTCAGCCATGGGCT +
Preference number: 4 (lower is better)
Translates to: YGEFHKELAKNLHSPESVECIHR*SCQPWA
Trigger: AGCCCATGGCTGACAGCTGCATCTATGAATGCATTC...AACTGATTCTGGGCTGTGAAGATTCTTCGCTAATTCTTTATGAAACTCACCGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS-3UTR GCA 90 bp TTTCCTGTTCTCTGCCGTCTTCTCTCAGTTCTCCGTCTTCTGCATTACAGGTATAATAATTTACTGAATTaGAGAGTCTCCCTGGGTAAG +
Preference number: 4 (lower is better)
Translates to: FPVLCRLLSVLRLLHYRYNNLLN*RVSLGK
Trigger: CTTACCCAGGGAGACTCTGCAATTCAGTAAATTATT...ATACCTGTAATGCAGAAGACGGAGAACTGAGAGAAGACGGCAGAGAACAGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409354.6
CDS-3UTR GCA 90 bp TTTCCTGTTCTCTGCCGTCTTCTCTCAGTTCTCCGTCTTCTGCATTACAGGTATGCATTTGAACAAGACTaGTGGAGGCATCAAATAATT +
Preference number: 4 (lower is better)
Translates to: FPVLCRLLSVLRLLHYRYAFEQD*WRHQII
Trigger: AATTATTTGATGCCTCCAGCAGTCTTGTTCAAATGC...ATACCTGTAATGCAGAAGACGGAGAACTGAGAGAAGACGGCAGAGAACAGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409354.6
CDS-3UTR GCA 90 bp CAACAGCACACCCAAAGGTCCTCTTTCAAACCTGAGGAAGAGGAGATCATAGATGCATTTGAACAAGACTaGTGGAGGCATCAAATAATT +
Preference number: 4 (lower is better)
Translates to: QQHTQRSSFKPEEEEIIDAFEQD*WRHQII
Trigger: AATTATTTGATGCCTCCAGCAGTCTTGTTCAAATGC...ATCTATGATCTCCTCTTCCTCAGGTTTGAAAGAGGACCTTTGGGTGTGCTGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS-3UTR GCA 90 bp GGACAGATACTACCTAGCTGTTCCTGCCTATACCACTCTTCTTACTTTAGAGCTGCTCAGGATGTTTATTaGCTCATAGATCTCATCACA +
Preference number: 4 (lower is better)
Translates to: GQILPSCSCLYHSSYFRAAQDVY*LIDLIT
Trigger: TGTGATGAGATCTATGAGGCAATAAACATCCTGAGC...AGCTCTAAAGTAAGAAGAGTGGTATAGGCAGGAACAGCTAGGTAGTATCTGTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR GCA 90 bp GTATACATGTGCCATGGTGGTGTGCTGCACCCATTAACTCGTCATTTAGCATTAGCTCAGGATGTTTATTaGCTCATAGATCTCATCACA +
Preference number: 4 (lower is better)
Translates to: VYMCHGGVLHPLTRHLALAQDVY*LIDLIT
Trigger: TGTGATGAGATCTATGAGGCAATAAACATCCTGAGC...TAATGCTAAATGACGAGTTAATGGGTGCAGCACACCACCATGGCACATGTATAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS-3UTR CCA 90 bp CTGCTGGAGGCATCAAATAATTTACTGAATTGCAGAGTCTCCCTGGGTAAGCGGTGTTGTCTTGTTTATTaGGCCGGGTATTTCATAATA +
Preference number: 4 (lower is better)
Translates to: LLEASNNLLNCRVSLGKRCCLVY*AGYFII
Trigger: TATTATGAAATACCCGGCCCAATAAACAAGACAACA...CCGCTTACCCAGGGAGACTCTGCAATTCAGTAAATTATTTGATGCCTCCAGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS-3UTR CCA 90 bp GTATACATGTGCCATGGTGGTGTGCTGCACCCATTAACTCGTCATTTAGCATTAGTGACTGACACACACTaGATTTTATTCCGAATGCAT +
Preference number: 4 (lower is better)
Translates to: VYMCHGGVLHPLTRHLALVTDTH*ILFRMH
Trigger: ATGCATTCGGAATAAAATCCAGTGTGTGTCAGTCAC...TAATGCTAAATGACGAGTTAATGGGTGCAGCACACCACCATGGCACATGTATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS-3UTR CCA 90 bp GTTCTAAGGGGCAGTCAGGGCAAATTACTCATAGCAGTAATTCGAGAGAACCATTCTTCAGCCAACAGTTaGATGTTAATAGGGGATAGA +
Preference number: 4 (lower is better)
Translates to: VLRGSQGKLLIAVIRENHSSANS*MLIGDR
Trigger: TCTATCCCCTATTAACATCCAACTGTTGGCTGAAGA...ATGGTTCTCTCGAATTACTGCTATGAGTAATTTGCCCTGACTGCCCCTTAGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR CCA 90 bp GAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCACATCCAGAAGTGGTCTTGTTaGAGCATAGAAGGTTCCAAG +
Preference number: 4 (lower is better)
Translates to: ELVYSPTNSVKVFLFLHIQKWSC*SIEGSK
Trigger: CTTGGAACCTTCTATGCTCCAACAAGACCACTTCTG...GATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS-3UTR CCA 90 bp GAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCACATCTCAGCTTTCTACATATaGCTAGCCAGTTTTCCCAGC +
Preference number: 4 (lower is better)
Translates to: ELVYSPTNSVKVFLFLHISAFYI*LASFPS
Trigger: GCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGA...GATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS-3UTR TCA 90 bp GGACAGATACTACCTAGCTGTTCCTGCCTATACCACTCTTCTTACTTTAGAGCTCAAACAACTCTATCATaGACACAGTTGATAGCTAGA +
Preference number: 4 (lower is better)
Translates to: GQILPSCSCLYHSSYFRAQTTLS*TQLIAR
Trigger: TCTAGCTATCAACTGTGTTCATGATAGAGTTGTTTG...AGCTCTAAAGTAAGAAGAGTGGTATAGGCAGGAACAGCTAGGTAGTATCTGTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR TCA 90 bp AATGGTATTTCTAGTTCCAGATCCCTGAGGAATCGCCACACTGACTTCCACAATCAAACAACTCTATCATaGACACAGTTGATAGCTAGA +
Preference number: 4 (lower is better)
Translates to: NGISSSRSLRNRHTDFHNQTTLS*TQLIAR
Trigger: TCTAGCTATCAACTGTGTTCATGATAGAGTTGTTTG...ATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTGGAACTAGAAATACCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS-3UTR TCA 90 bp GAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCACATCTTAGTGGTATTCTGGTaGCTGACACACACTGGATTT +
Preference number: 4 (lower is better)
Translates to: ELVYSPTNSVKVFLFLHILVVFW*LTHTGF
Trigger: AAATCCAGTGTGTGTCAGTCACCAGAATACCACTAA...GATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS-3UTR TCA 90 bp GTTCTAAGGGGCAGTCAGGGCAAATTACTCATAGCAGTAATTCGAGAGAACCATTTGGGAATAGGAGAATaGAAATTTGCTGGTAACTCA +
Preference number: 4 (lower is better)
Translates to: VLRGSQGKLLIAVIRENHLGIGE*KFAGNS
Trigger: TGAGTTACCAGCAAATTTTCATTCTCCTATTCCCAA...ATGGTTCTCTCGAATTACTGCTATGAGTAATTTGCCCTGACTGCCCCTTAGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR GCA 90 bp TACGGTGAGTTTCATAAAGAATTAGCGAAGAATCTTCACAGCCCAGAATCAGTTCTTCCTTTCAGTTTATaGCTGCTATGGTCACTCTCC +
Preference number: 4 (lower is better)
Translates to: YGEFHKELAKNLHSPESVLPFSL*LLWSLS
Trigger: GGAGAGTGACCATAGCAGGCATAAACTGAAAGGAAG...AACTGATTCTGGGCTGTGAAGATTCTTCGCTAATTCTTTATGAAACTCACCGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS-3UTR CCA 90 bp TTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCCAATGCTCTGTCGCTGGTaGATCTTTCTTGTCATAATA +
Preference number: 4 (lower is better)
Translates to: LGIYPVMGWLGQMVFLVPMLCRW*IFLVII
Trigger: TATTATGACAAGAAAGATCCACCAGCGACAGAGCAT...TGGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS-3UTR CCA 90 bp TCCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGACCTGATAAGGCTGTTTaGTGCCAAAGCGAACATCCA +
Preference number: 4 (lower is better)
Translates to: STLMVVSFAVQKLFSLIRPDKAV*CQSEHP
Trigger: TGGATGTTCGCTTTGGCACCAAACAGCCTTATCAGG...TCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS-3UTR CCA 90 bp TTTCCTGTTCTCTGCCGTCTTCTCTCAGTTCTCCGTCTTCTGCATTACAGGTATTTTGAACAAGACTGCTaGAGGCATCAAATAATTTAC +
Preference number: 4 (lower is better)
Translates to: FPVLCRLLSVLRLLHYRYFEQDC*RHQIIY
Trigger: GTAAATTATTTGATGCCTCCAGCAGTCTTGTTCAAA...ATACCTGTAATGCAGAAGACGGAGAACTGAGAGAAGACGGCAGAGAACAGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409354.6
CDS-3UTR CCA 90 bp CAACAGCACACCCAAAGGTCCTCTTTCAAACCTGAGGAAGAGGAGATCATAGATTTTGAACAAGACTGCTaGAGGCATCAAATAATTTAC +
Preference number: 4 (lower is better)
Translates to: QQHTQRSSFKPEEEEIIDFEQDC*RHQIIY
Trigger: GTAAATTATTTGATGCCTCCAGCAGTCTTGTTCAAA...ATCTATGATCTCCTCTTCCTCAGGTTTGAAAGAGGACCTTTGGGTGTGCTGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS-3UTR CCA 90 bp AAGTTACCACACTATAGTTTCATGGATGCTGTTAGAAGACATGAGACTCCTGAGAGTGGAATCCAGAAGTaGTCTTGTTGGAGCATAGAA +
Preference number: 4 (lower is better)
Translates to: KLPHYSFMDAVRRHETPESGIQK*SCWSIE
Trigger: TTCTATGCTCCAACAAGACCACTTCTGGATTCCACT...CTCAGGAGTCTCATGTCTTCTAACAGCATCCATGAAACTATAGTGTGGTAACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR CCA 90 bp GTTCTAAGGGGCAGTCAGGGCAAATTACTCATAGCAGTAATTCGAGAGAACCATGCTGGTAACTCAGTTTaGCTTACATGTTATGCATTA +
Preference number: 4 (lower is better)
Translates to: VLRGSQGKLLIAVIRENHAGNSV*LTCYAL
Trigger: TAATGCATAACATGTAAGCCAAACTGAGTTACCAGC...ATGGTTCTCTCGAATTACTGCTATGAGTAATTTGCCCTGACTGCCCCTTAGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR TCA 90 bp CTGCTGGCAACAAAACCTCATTTTTGTTTATTCGGTGATACTCCCTCTTTCCAATGGTATTCTGGTGACTaGCACACACTGGATTTTATT +
Preference number: 4 (lower is better)
Translates to: LLATKPHFCLFGDTPSFQWYSGD*HTLDFI
Trigger: AATAAAATCCAGTGTGTGTCAGTCACCAGAATACCA...TTGGAAAGAGGGAGTATCACCGAATAAACAAAAATGAGGTTTTGTTGCCAGCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS-3UTR GCA 90 bp GAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCACATCTCCATGGTGTATATGTaGCACATTTTCTTAACCCAG +
Preference number: 4 (lower is better)
Translates to: ELVYSPTNSVKVFLFLHISMVYM*HIFLTQ
Trigger: CTGGGTTAAGAAAATGTGGCACATATACACCATGGA...GATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS-3UTR CCA 90 bp GTTCTAAGGGGCAGTCAGGGCAAATTACTCATAGCAGTAATTCGAGAGAACCATTGTTGTCTTGTTTATTaGGCCGGGTATTTCATAATA +
Preference number: 4 (lower is better)
Translates to: VLRGSQGKLLIAVIRENHCCLVY*AGYFII
Trigger: TATTATGAAATACCCGGCCCAATAAACAAGACAACA...ATGGTTCTCTCGAATTACTGCTATGAGTAATTTGCCCTGACTGCCCCTTAGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR CCA 90 bp GAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCACATCTCTTCAGCCAACAGTTaGATGTTAATAGGGGATAGA +
Preference number: 4 (lower is better)
Translates to: ELVYSPTNSVKVFLFLHISSANS*MLIGDR
Trigger: TCTATCCCCTATTAACATCCAACTGTTGGCTGAAGA...GATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS-3UTR CCA 90 bp GTTCTAAGGGGCAGTCAGGGCAAATTACTCATAGCAGTAATTCGAGAGAACCATTTTGAACAAGACTGCTaGAGGCATCAAATAATTTAC +
Preference number: 4 (lower is better)
Translates to: VLRGSQGKLLIAVIRENHFEQDC*RHQIIY
Trigger: GTAAATTATTTGATGCCTCCAGCAGTCTTGTTCAAA...ATGGTTCTCTCGAATTACTGCTATGAGTAATTTGCCCTGACTGCCCCTTAGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR CCA 90 bp GTATACATGTGCCATGGTGGTGTGCTGCACCCATTAACTCGTCATTTAGCATTATTTGAACAAGACTGCTaGAGGCATCAAATAATTTAC +
Preference number: 4 (lower is better)
Translates to: VYMCHGGVLHPLTRHLALFEQDC*RHQIIY
Trigger: GTAAATTATTTGATGCCTCCAGCAGTCTTGTTCAAA...TAATGCTAAATGACGAGTTAATGGGTGCAGCACACCACCATGGCACATGTATAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS-3UTR TCA 90 bp TCCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATTCCATTCCCACCTATaGGTGAGAACATATGGTGTT +
Preference number: 4 (lower is better)
Translates to: STLMVVSFAVQKLFSLIRFHSHL*VRTYGV
Trigger: AACACCATATGTTCTCACTCATAGGTGGGAATGGAA...TCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS-3UTR GCA 90 bp TCCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGAGACTCTGCCAGCTTCTaGTTCTTTTCTAAGTTACCA +
Preference number: 4 (lower is better)
Translates to: STLMVVSFAVQKLFSLIRDSASF*FFSKLP
Trigger: TGGTAACTTAGAAAAGAAGCAGAAGCTGGCAGAGTC...TCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS-3UTR GCA 90 bp AAGTTACCACACTATAGTTTCATGGATGCTGTTAGAAGACATGAGACTCCTGAGAATAATTTACTGAATTaGAGAGTCTCCCTGGGTAAG +
Preference number: 4 (lower is better)
Translates to: KLPHYSFMDAVRRHETPENNLLN*RVSLGK
Trigger: CTTACCCAGGGAGACTCTGCAATTCAGTAAATTATT...CTCAGGAGTCTCATGTCTTCTAACAGCATCCATGAAACTATAGTGTGGTAACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR GCA 90 bp AAGTTACCACACTATAGTTTCATGGATGCTGTTAGAAGACATGAGACTCCTGAGGCATTTGAACAAGACTaGTGGAGGCATCAAATAATT +
Preference number: 4 (lower is better)
Translates to: KLPHYSFMDAVRRHETPEAFEQD*WRHQII
Trigger: AATTATTTGATGCCTCCAGCAGTCTTGTTCAAATGC...CTCAGGAGTCTCATGTCTTCTAACAGCATCCATGAAACTATAGTGTGGTAACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR CCA 90 bp AAGTTACCACACTATAGTTTCATGGATGCTGTTAGAAGACATGAGACTCCTGAGCACACTATAGTTTCATaGATGCTGTTAGAAGACATG +
Preference number: 4 (lower is better)
Translates to: KLPHYSFMDAVRRHETPEHTIVS*MLLEDM
Trigger: CATGTCTTCTAACAGCATCCATGAAACTATAGTGTG...CTCAGGAGTCTCATGTCTTCTAACAGCATCCATGAAACTATAGTGTGGTAACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR CCA 90 bp GAACTCAAATCTCATATAAAAGTTGATAAGCATGCCTGCCCCTTTCTCCAGAGGTTATCTGCTAAAGAATaGGTGTCAATAACTGTGAAG +
Preference number: 4 (lower is better)
Translates to: ELKSHIKVDKHACPFLQRLSAKE*VSITVK
Trigger: CTTCACAGTTATTGACACCCATTCTTTAGCAGATAA...CCTCTGGAGAAAGGGGCAGGCATGCTTATCAACTTTTATATGAGATTTGAGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR CCA 90 bp TCCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATGCCTGTGTCCTGAATaGTATTGCCTAGGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: STLMVVSFAVQKLFSLIRCLCPE*YCLGFL
Trigger: AAGAAAACCTAGGCAATACCATTCAGGACACAGGCA...TCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS-3UTR TCA 90 bp TCCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGAGAACCAAAAAGGAGCTaGCAGACATATTTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: STLMVVSFAVQKLFSLIREPKRS*QTYLFF
Trigger: GAAGAACAAATATGTCTGTCAGCTCCTTTTTGGTTC...TCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS-3UTR TCA 90 bp TACGGTGAGTTTCATAAAGAATTAGCGAAGAATCTTCACAGCCCAGAATCAGTTCAAACAACTCTATCATaGACACAGTTGATAGCTAGA +
Preference number: 4 (lower is better)
Translates to: YGEFHKELAKNLHSPESVQTTLS*TQLIAR
Trigger: TCTAGCTATCAACTGTGTTCATGATAGAGTTGTTTG...AACTGATTCTGGGCTGTGAAGATTCTTCGCTAATTCTTTATGAAACTCACCGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS-3UTR TCA 90 bp TCCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATGGTATTCTGGTGACTaGCACACACTGGATTTTATT +
Preference number: 4 (lower is better)
Translates to: STLMVVSFAVQKLFSLIRWYSGD*HTLDFI
Trigger: AATAAAATCCAGTGTGTGTCAGTCACCAGAATACCA...TCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS-3UTR TCA 90 bp TCCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGACATCAAATAATTTACTaGATTGCAGAGTCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: STLMVVSFAVQKLFSLIRHQIIY*IAESPW
Trigger: CCAGGGAGACTCTGCAATTCAGTAAATTATTTGATG...TCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS-3UTR CCA 90 bp GAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCACATCTGTTGTCTTGTTTATTaGGCCGGGTATTTCATAATA +
Preference number: 4 (lower is better)
Translates to: ELVYSPTNSVKVFLFLHICCLVY*AGYFII
Trigger: TATTATGAAATACCCGGCCCAATAAACAAGACAACA...GATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409562.7
3UTR CAA 72 bp TTACTCATAGCAGTAATTCGAGAGAACCATGGAGAATaGTCTTCTAACAATGGATCTGGGCTGAAAAATTTG +
Preference number: 4 (lower is better)
Translates to: LLIAVIRENHGE*SSNNGSGLKNL
Trigger: CAAATTTTTCAGCCCAGATCCATTGTTAGAAGACAATTCTCCATGGTTCTCTCGAATTACTGCTATGAGTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR TCA 90 bp TCCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGACTTATAATCCAAGGCTaGGAGTTTTTCCAGTCTTTT +
Preference number: 4 (lower is better)
Translates to: STLMVVSFAVQKLFSLIRLIIQG*EFFQSF
Trigger: AAAAGACTGGAAAAACTCTCAGCCTTGGATTATAAG...TCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS-3UTR TCA 90 bp TCCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGAGCACATGTTGTTTGCTaGCTTTTTAATGATCACCAT +
Preference number: 4 (lower is better)
Translates to: STLMVVSFAVQKLFSLIRAHVVC*LFNDHH
Trigger: ATGGTGATCATTAAAAAGTCAGCAAACAACATGTGC...TCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS-3UTR GCA 90 bp TCCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGAGCATTTGAACAAGACTaGTGGAGGCATCAAATAATT +
Preference number: 4 (lower is better)
Translates to: STLMVVSFAVQKLFSLIRAFEQD*WRHQII
Trigger: AATTATTTGATGCCTCCAGCAGTCTTGTTCAAATGC...TCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS-3UTR GCA 90 bp ATTTCCTTTAGCATTTCTTGCAGTGAAGGTCTGCTGGCAACAAAACCTCATTTTATGTCTTTTAATCCTTaGCAAACTAAAGAGAGCCAA +
Preference number: 4 (lower is better)
Translates to: ISFSISCSEGLLATKPHFMSFNP*QTKESQ
Trigger: TTGGCTCTCTTTAGTTTGGCAAGGATTAAAAGACAT...AAAATGAGGTTTTGTTGCCAGCAGACCTTCACTGCAAGAAATGCTAAAGGAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS-3UTR CCA 90 bp TCCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGAGTTCTTTGTAGATTCTaGATATTAGCCCTTTGTCAG +
Preference number: 4 (lower is better)
Translates to: STLMVVSFAVQKLFSLIRVLCRF*ILALCQ
Trigger: CTGACAAAGGGCTAATATCCAGAATCTACAAAGAAC...TCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS GCA 90 bp CTTGGGTCTCCAGGACGCCGCCGCCGCCGCCACAGTTTCCTCAGGTaGTACAAAGCAGCCAGGGTGTGCGTGCGCTCCCGCCTCGTCGCT +
Preference number: 5 (lower is better)
Translates to: LGSPGRRRRRHSFLR*YKAARVCVRSRLVA
Trigger: AGCGACGAGGCGGGAGCGCACGCACACCCTGGCTGCTTTGTAGCACCTGAGGAAACTGTGGCGGCGGCGGCGGCGTCCTGGAGACCCAAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000272321.12
ENST00000409562.7
ENST00000409835.5
ENST00000417238.5
ENST00000431065.1
ENST00000484073.1
CDS TCA 90 bp AGCAGCCAGGGTGTGCGTGCGCTCCCGCCTCGTCGCTTAGCAACCTaGGAAGCTGTCCGGTCGTCCCAACTTATCAATTCCCCCGCCCCT +
Preference number: 5 (lower is better)
Translates to: SSQGVRALPPRRLAT*EAVRSSQLINSPAP
Trigger: AGGGGCGGGGGAATTGATAAGTTGGGACGACCGGACAGCTTCTCAGGTTGCTAAGCGACGAGGCGGGAGCGCACGCACACCCTGGCTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409562.7
ENST00000409835.5
ENST00000417238.5
ENST00000431065.1
ENST00000484073.1
CDS GCA 90 bp GCCGCCACAGTTTCCTCAGGTGCTACAAAGCAGCCAGGGTGTGCGTaGGCTCCCGCCTCGTCGCTTAGCAACCTGAGAAGCTGTCCGGTC +
Preference number: 5 (lower is better)
Translates to: AATVSSGATKQPGCA*APASSLSNLRSCPV
Trigger: GACCGGACAGCTTCTCAGGTTGCTAAGCGACGAGGCGGGAGCGCACGCACACCCTGGCTGCTTTGTAGCACCTGAGGAAACTGTGGCGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000272321.12
ENST00000409562.7
ENST00000409835.5
ENST00000417238.5
ENST00000431065.1
ENST00000484073.1
CDS-3UTR CAA 90 bp GGTGCGACCTCAGCTCACTGCAGCCTCCGCCCTCCGGGTTCACGCCATTCTCCTTGCAACTCCCCTTGGTaGCTGCCAACTAGCAGAATG +
Preference number: 5 (lower is better)
Translates to: GATSAHCSLRPPGSRHSPCNSPW*LPTSRM
Trigger: CATTCTGCTAGTTGGCAGCAACCAAGGGGAGTTGCA...AGGAGAATGGCGTGAACCCGGAGGGCGGAGGCTGCAGTGAGCTGAGGTCGCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS TCA 90 bp CTCTCCCGCCAATTGCCGGGCTCCATCAGGCAGGTCCTTTCCTCCTaGGCCCAAACCATCCGTTTGTTGTCGTCCTCCAATCACAGGGGC +
Preference number: 5 (lower is better)
Translates to: LSRQLPGSIRQVLSS*AQTIRLLSSSNHRG
Trigger: GCCCCTGTGATTGGAGGACGACAACAAACGGATGGTTTGGGCTCAGGAGGAAAGGACCTGCCTGATGGAGCCCGGCAATTGGCGGGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431065.1
CDS CCA 90 bp TATCCTGTCTCGGGAGTGGGGAAGAAGCGCGACTCCCGGCCGCTTTaGAGTAGGCGTCCCAGCAAAACTCTCGCCTCATCACCAGACACT +
Preference number: 5 (lower is better)
Translates to: YPVSGVGKKRDSRPL*SRRPSKTLASSPDT
Trigger: AGTGTCTGGTGATGAGGCGAGAGTTTTGCTGGGACGCCTACTCCAAAGCGGCCGGGAGTCGCGCTTCTTCCCCACTCCCGAGACAGGATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272321.12
ENST00000409562.7
ENST00000409835.5
ENST00000431065.1
CDS CCA 90 bp TCAACTGTCTCGGGAGTGGGGAAGAAGCGCGACTCCCGGCCGCTTTaGAGTAGGCGTCCCAGCAAAACTCTCGCCTCATCACCAGACACT +
Preference number: 5 (lower is better)
Translates to: STVSGVGKKRDSRPL*SRRPSKTLASSPDT
Trigger: AGTGTCTGGTGATGAGGCGAGAGTTTTGCTGGGACGCCTACTCCAAAGCGGCCGGGAGTCGCGCTTCTTCCCCACTCCCGAGACAGTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484073.1
CDS GCA 90 bp GATTCTCCCCTCCCTAGAGTTACACACGCTATCTCTCCCGCCAATTaGCGGGCTCCATCAGGCAGGTCCTTTCCTCCTGAGCCCAAACCA +
Preference number: 5 (lower is better)
Translates to: DSPLPRVTHAISPAN*RAPSGRSFPPEPKP
Trigger: TGGTTTGGGCTCAGGAGGAAAGGACCTGCCTGATGGAGCCCGGCAATTGGCGGGAGAGATAGCGTGTGTAACTCTAGGGAGGGGAGAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431065.1
CDS-3UTR CAA 90 bp GGTGCGACCTCAGCTCACTGCAGCCTCCGCCCTCCGGGTTCACGCCATTCTCCTCAACCCCAGAGGTTATaGATTCTGCATCAATGTCAC +
Preference number: 5 (lower is better)
Translates to: GATSAHCSLRPPGSRHSPQPQRL*ILHQCH
Trigger: GTGACATTGATGCAGAATCAATAACCTCTGGGGTTG...AGGAGAATGGCGTGAACCCGGAGGGCGGAGGCTGCAGTGAGCTGAGGTCGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR CAA 90 bp CGACCTCAGCTCACTGCAGCCTCCGCCCTCCGGGTTCACGCCATTCTCCTGCTTCTGAGGAGCTATCCATaGCATTTGAACAAGACTGCT +
Preference number: 5 (lower is better)
Translates to: RPQLTAASALRVHAILLLLRSYP*HLNKTA
Trigger: AGCAGTCTTGTTCAAATGCAATGGATAGCTCCTCAG...AAGCAGGAGAATGGCGTGAACCCGGAGGGCGGAGGCTGCAGTGAGCTGAGGTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR CAA 90 bp TCCAGAGGGAAACAGTATCTGTGTTCTAAGGGGCAGTCAGGGCAAATTACTCATCGCTCGCTTGGTCTCTaGGGTCTCCAGGACGCCGCC +
Preference number: 5 (lower is better)
Translates to: SRGKQYLCSKGQSGQITHRSLGL*GLQDAA
Trigger: GGCGGCGTCCTGGAGACCCAAGAGACCAAGCGAGCG...ATGAGTAATTTGCCCTGACTGCCCCTTAGAACACAGATACTGTTTCCCTCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR CAA 90 bp TTCCCCACCAGGCTTCTGTCAATCACCACTTTCTCCAGCTGCGGCCCAGAAAGGCACACACCGACTGTTTaGCATCAGCTCCTCCAACTC +
Preference number: 5 (lower is better)
Translates to: FPTRLLSITTFSSCGPERHTPTV*HQLLQL
Trigger: GAGTTGGAGGAGCTGATGCAAAACAGTCGGTGTGTG...CCTTTCTGGGCCGCAGCTGGAGAAAGTGGTGATTGACAGAAGCCTGGTGGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417238.5
ENST00000418148.5
CDS-3UTR CAA 90 bp CGACCTCAGCTCACTGCAGCCTCCGCCCTCCGGGTTCACGCCATTCTCCTGCTTTGCTCAGGATGTTTATaGCCTCATAGATCTCATCAC +
Preference number: 5 (lower is better)
Translates to: RPQLTAASALRVHAILLLCSGCL*PHRSHH
Trigger: GTGATGAGATCTATGAGGCAATAAACATCCTGAGCA...AAGCAGGAGAATGGCGTGAACCCGGAGGGCGGAGGCTGCAGTGAGCTGAGGTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS GCA 90 bp ATGAGCTTCCCCACCAGGCTTCTGTCAATCACCACTTTCTCCAGCTaGGGCCCAGAAAGGCTTAGAGACACCAGCACACCTGACAGACAT +
Preference number: 5 (lower is better)
Translates to: MSFPTRLLSITTFSS*GPERLRDTSTPDRH
Trigger: ATGTCTGTCAGGTGTGCTGGTGTCTCTAAGCCTTTCTGGGCCGCAGCTGGAGAAAGTGGTGATTGACAGAAGCCTGGTGGGGAAGCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418148.5
CDS GCA 90 bp ATGAGCTTCCCCACCAGGCTTCTGTCAATCACCACTTTCTCCAGCTaGGGCCCAGAAAGGCTTAGAGACACCAGCACACCTTCAAGGCAA +
Preference number: 5 (lower is better)
Translates to: MSFPTRLLSITTFSS*GPERLRDTSTPSRQ
Trigger: TTGCCTTGAAGGTGTGCTGGTGTCTCTAAGCCTTTCTGGGCCGCAGCTGGAGAAAGTGGTGATTGACAGAAGCCTGGTGGGGAAGCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473678.1
CDS-3UTR CAA 90 bp AATGGTATTTCTAGTTCCAGATCCCTGAGGAATCGCCACACTGACTTCCACAATCGCTCGCTTGGTCTCTaGGGTCTCCAGGACGCCGCC +
Preference number: 5 (lower is better)
Translates to: NGISSSRSLRNRHTDFHNRSLGL*GLQDAA
Trigger: GGCGGCGTCCTGGAGACCCAAGAGACCAAGCGAGCG...ATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTGGAACTAGAAATACCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS-3UTR CAA 90 bp GCTTCCCCACCAGGCTTCTGTCAATCACCACTTTCTCCAGCTGCGGCCCAGAAAAGCTCCTCCAACTCTTaGAGCGAGTCTCGGAGTTTT +
Preference number: 5 (lower is better)
Translates to: ASPPGFCQSPLSPAAAQKSSSNS*SESRSF
Trigger: AAAACTCCGAGACTCGCTCAAAGAGTTGGAGGAGCT...TTTCTGGGCCGCAGCTGGAGAAAGTGGTGATTGACAGAAGCCTGGTGGGGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417238.5
ENST00000418148.5
CDS-3UTR CAA 90 bp ATGAGCTTCCCCACCAGGCTTCTGTCAATCACCACTTTCTCCAGCTGCGGCCCACTAGATGTCGCTCTGTaGTCTTGTTTATTGGGCCGG +
Preference number: 5 (lower is better)
Translates to: MSFPTRLLSITTFSSCGPLDVAL*SCLLGR
Trigger: CCGGCCCAATAAACAAGACAACAGAGCGACATCTAG...TGGGCCGCAGCTGGAGAAAGTGGTGATTGACAGAAGCCTGGTGGGGAAGCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS-3UTR CAA 90 bp GATGAGCTTCCCCACCAGGCTTCTGTCAATCACCACTTTCTCCAGCTGCGGCCCAGCTATCCATTGCATTaGAACAAGACTGCTGGAGGC +
Preference number: 5 (lower is better)
Translates to: DELPHQASVNHHFLQLRPSYPLH*NKTAGG
Trigger: GCCTCCAGCAGTCTTGTTCAAATGCAATGGATAGCT...GGGCCGCAGCTGGAGAAAGTGGTGATTGACAGAAGCCTGGTGGGGAAGCTCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS-3UTR CAA 90 bp GGTGCGACCTCAGCTCACTGCAGCCTCCGCCCTCCGGGTTCACGCCATTCTCCTCCTTCTGTCAATTATTaGTCTGTTAGAAGAGCCATT +
Preference number: 5 (lower is better)
Translates to: GATSAHCSLRPPGSRHSPPSVNY*SVRRAI
Trigger: AATGGCTCTTCTAACAGACAAATAATTGACAGAAGG...AGGAGAATGGCGTGAACCCGGAGGGCGGAGGCTGCAGTGAGCTGAGGTCGCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR CAA 90 bp GTGCCATGGTGGTGTGCTGCACCCATTAACTCGTCATTTAGCATTAGGTATATCGAGCGACACGCTCGCTaGGTCTCTTGGGTCTCCAGG +
Preference number: 5 (lower is better)
Translates to: VPWWCAAPINSSFSIRYIERHAR*VSWVSR
Trigger: CCTGGAGACCCAAGAGACCAAGCGAGCGTGTCGCTC...GATATACCTAATGCTAAATGACGAGTTAATGGGTGCAGCACACCACCATGGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS-3UTR CAA 90 bp CCAAGCTTGCTGACAAGAAGCATGATGAGGTCATCAGCAGGGGACAGTCTGGAGTGCAACTCCCCTTGGTaGCTGCCAACTAGCAGAATG +
Preference number: 5 (lower is better)
Translates to: PSLLTRSMMRSSAGDSLECNSPW*LPTSRM
Trigger: CATTCTGCTAGTTGGCAGCAACCAAGGGGAGTTGCA...CTCCAGACTGTCCCCTGCTGATGACCTCATCATGCTTCTTGTCAGCAAGCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS CCA 90 bp TTCTGTATTTTGTCCAGAATTTATCATGGTTTTCTGTCTCGGGAGTaGGGAAGAAGCGCGACTCCCGGCCGCTTTGGAGTAGGCGTCCCA +
Preference number: 5 (lower is better)
Translates to: FCILSRIYHGFLSRE*GRSATPGRFGVGVP
Trigger: TGGGACGCCTACTCCAAAGCGGCCGGGAGTCGCGCTTCTTCCCCACTCCCGAGACAGAAAACCATGATAAATTCTGGACAAAATACAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS-3UTR CAA 90 bp GGACAGATACTACCTAGCTGTTCCTGCCTATACCACTCTTCTTACTTTAGAGCTGAGCGACACGCTCGCTaGGTCTCTTGGGTCTCCAGG +
Preference number: 5 (lower is better)
Translates to: GQILPSCSCLYHSSYFRAERHAR*VSWVSR
Trigger: CCTGGAGACCCAAGAGACCAAGCGAGCGTGTCGCTC...AGCTCTAAAGTAAGAAGAGTGGTATAGGCAGGAACAGCTAGGTAGTATCTGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR CAA 90 bp CTCAAGCAATTCTTCTGCCTCAGCTTCACAAGCATGTACCACCATGCCTGGCTACAGGGTCACTCTCTGTaGCCCAGGTTAGAGTGCAGT +
Preference number: 5 (lower is better)
Translates to: LKQFFCLSFTSMYHHAWLQGHSL*PRLECS
Trigger: ACTGCACTCTAACCTGGGCAACAGAGAGTGACCCTG...TAGCCAGGCATGGTGGTACATGCTTGTGAAGCTGAGGCAGAAGAATTGCTTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272321.12
ENST00000409199.5
ENST00000409354.6
CDS CCA 90 bp TTGCATCAGCTCCTCCAACTCTTTGAGCGAGTCTCGGAGTTTTTCTaGGCGTCTGTTTTTGAGCGTCCAAGGATAATCTCGTGCTGGTGG +
Preference number: 5 (lower is better)
Translates to: LHQLLQLFERVSEFF*ASVFERPRIISCWW
Trigger: CCACCAGCACGAGATTATCCTTGGACGCTCAAAAACAGACGCCCAGAAAAACTCCGAGACTCGCTCAAAGAGTTGGAGGAGCTGATGCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000490935.5
CDS-3UTR CAA 90 bp GTGCTAAGAGAGTCACTCTACGGTGAGTTTCATAAAGAATTAGCGAAGAATCTTCGCTCGCTTGGTCTCTaGGGTCTCCAGGACGCCGCC +
Preference number: 5 (lower is better)
Translates to: VLRESLYGEFHKELAKNLRSLGL*GLQDAA
Trigger: GGCGGCGTCCTGGAGACCCAAGAGACCAAGCGAGCG...AAGATTCTTCGCTAATTCTTTATGAAACTCACCGTAGAGTGACTCTCTTAGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS-3UTR CAA 90 bp GTGAACCTGTCAGTGCTAGGACAGATACTACCTAGCTGTTCCTGCCTATACCACCACACACCGACTGTTTaGCATCAGCTCCTCCAACTC +
Preference number: 5 (lower is better)
Translates to: VNLSVLGQILPSCSCLYHHTPTV*HQLLQL
Trigger: GAGTTGGAGGAGCTGATGCAAAACAGTCGGTGTGTG...GTGGTATAGGCAGGAACAGCTAGGTAGTATCTGTCCTAGCACTGACAGGTTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR CAA 90 bp CTCAAGCAATTCTTCTGCCTCAGCTTCACAAGCATGTACCACCATGCCTGGCTACCCAGGAGGAGTAGATaGGCTCTGTCCTTCTCAGAA +
Preference number: 5 (lower is better)
Translates to: LKQFFCLSFTSMYHHAWLPRRSR*ALSFSE
Trigger: TTCTGAGAAGGACAGAGCCAATCTACTCCTCCTGGG...TAGCCAGGCATGGTGGTACATGCTTGTGAAGCTGAGGCAGAAGAATTGCTTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272321.12
ENST00000409199.5
ENST00000409354.6
CDS-3UTR CAA 90 bp CTCAAGCAATTCTTCTGCCTCAGCTTCACAAGCATGTACCACCATGCCTGGCTATCAGCCATGGGCTCTTaGTCTACACTTACGGAGTGC +
Preference number: 5 (lower is better)
Translates to: LKQFFCLSFTSMYHHAWLSAMGS*STLTEC
Trigger: GCACTCCGTAAGTGTAGACAAAGAGCCCATGGCTGA...TAGCCAGGCATGGTGGTACATGCTTGTGAAGCTGAGGCAGAAGAATTGCTTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272321.12
ENST00000409199.5
ENST00000409354.6
CDS-3UTR CAA 90 bp AAATTTGCAACTCCCCTTGGTTGCTGCCAACTAGCAGAATGGCACCACTTGGGTTCAGCCATGGGCTCTTaGTCTACACTTACGGAGTGC +
Preference number: 5 (lower is better)
Translates to: KFATPLGCCQLAEWHHLGSAMGS*STLTEC
Trigger: GCACTCCGTAAGTGTAGACAAAGAGCCCATGGCTGA...ACCCAAGTGGTGCCATTCTGCTAGTTGGCAGCAACCAAGGGGAGTTGCAAATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS-3UTR CAA 90 bp CTCAAGCAATTCTTCTGCCTCAGCTTCACAAGCATGTACCACCATGCCTGGCTATGCAACTCCCCTTGGTaGCTGCCAACTAGCAGAATG +
Preference number: 5 (lower is better)
Translates to: LKQFFCLSFTSMYHHAWLCNSPW*LPTSRM
Trigger: CATTCTGCTAGTTGGCAGCAACCAAGGGGAGTTGCA...TAGCCAGGCATGGTGGTACATGCTTGTGAAGCTGAGGCAGAAGAATTGCTTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272321.12
ENST00000409199.5
ENST00000409354.6
CDS-3UTR CAA 90 bp ATGAGCTTCCCCACCAGGCTTCTGTCAATCACCACTTTCTCCAGCTGCGGCCCAAGCCATATCAAAAATTaGCAACTCCCCTTGGTTGCT +
Preference number: 5 (lower is better)
Translates to: MSFPTRLLSITTFSSCGPSHIKN*QLPLVA
Trigger: AGCAACCAAGGGGAGTTGCAAATTTTTGATATGGCT...TGGGCCGCAGCTGGAGAAAGTGGTGATTGACAGAAGCCTGGTGGGGAAGCTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS-3UTR CAA 90 bp GTGAACCTGTCAGTGCTAGGACAGATACTACCTAGCTGTTCCTGCCTATACCACCTAGATGTCGCTCTGTaGTCTTGTTTATTGGGCCGG +
Preference number: 5 (lower is better)
Translates to: VNLSVLGQILPSCSCLYHLDVAL*SCLLGR
Trigger: CCGGCCCAATAAACAAGACAACAGAGCGACATCTAG...GTGGTATAGGCAGGAACAGCTAGGTAGTATCTGTCCTAGCACTGACAGGTTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR CAA 90 bp CTCAAGCAATTCTTCTGCCTCAGCTTCACAAGCATGTACCACCATGCCTGGCTACTAGATGTCGCTCTGTaGTCTTGTTTATTGGGCCGG +
Preference number: 5 (lower is better)
Translates to: LKQFFCLSFTSMYHHAWLLDVAL*SCLLGR
Trigger: CCGGCCCAATAAACAAGACAACAGAGCGACATCTAG...TAGCCAGGCATGGTGGTACATGCTTGTGAAGCTGAGGCAGAAGAATTGCTTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272321.12
ENST00000409199.5
ENST00000409354.6
CDS-3UTR CAA 90 bp GATTTCCTGTTCTCTGCCGTCTTCTCTCAGTTCTCCGTCTTCTGCATTACAGGTTCAGCCATGGGCTCTTaGTCTACACTTACGGAGTGC +
Preference number: 5 (lower is better)
Translates to: DFLFSAVFSQFSVFCITGSAMGS*STLTEC
Trigger: GCACTCCGTAAGTGTAGACAAAGAGCCCATGGCTGA...ACCTGTAATGCAGAAGACGGAGAACTGAGAGAAGACGGCAGAGAACAGGAAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409354.6
CDS-3UTR CAA 90 bp CTCAAGCAATTCTTCTGCCTCAGCTTCACAAGCATGTACCACCATGCCTGGCTAGCAGAATGGCACCACTaGGGTGGCAGCTTATTAATG +
Preference number: 5 (lower is better)
Translates to: LKQFFCLSFTSMYHHAWLAEWHH*GGSLLM
Trigger: CATTAATAAGCTGCCACCCAAGTGGTGCCATTCTGC...TAGCCAGGCATGGTGGTACATGCTTGTGAAGCTGAGGCAGAAGAATTGCTTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272321.12
ENST00000409199.5
ENST00000409354.6
CDS-3UTR CAA 90 bp GATTTCCTGTTCTCTGCCGTCTTCTCTCAGTTCTCCGTCTTCTGCATTACAGGTTGCAACTCCCCTTGGTaGCTGCCAACTAGCAGAATG +
Preference number: 5 (lower is better)
Translates to: DFLFSAVFSQFSVFCITGCNSPW*LPTSRM
Trigger: CATTCTGCTAGTTGGCAGCAACCAAGGGGAGTTGCA...ACCTGTAATGCAGAAGACGGAGAACTGAGAGAAGACGGCAGAGAACAGGAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409354.6
CDS-3UTR CAA 90 bp TCCAGAGGGAAACAGTATCTGTGTTCTAAGGGGCAGTCAGGGCAAATTACTCATCAGGGTCACTCTCTGTaGCCCAGGTTAGAGTGCAGT +
Preference number: 5 (lower is better)
Translates to: SRGKQYLCSKGQSGQITHQGHSL*PRLECS
Trigger: ACTGCACTCTAACCTGGGCAACAGAGAGTGACCCTG...ATGAGTAATTTGCCCTGACTGCCCCTTAGAACACAGATACTGTTTCCCTCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR CAA 90 bp TTTCCTGTTCTCTGCCGTCTTCTCTCAGTTCTCCGTCTTCTGCATTACAGGTATCAGGGTCACTCTCTGTaGCCCAGGTTAGAGTGCAGT +
Preference number: 5 (lower is better)
Translates to: FPVLCRLLSVLRLLHYRYQGHSL*PRLECS
Trigger: ACTGCACTCTAACCTGGGCAACAGAGAGTGACCCTG...ATACCTGTAATGCAGAAGACGGAGAACTGAGAGAAGACGGCAGAGAACAGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409354.6
CDS-3UTR CAA 90 bp CTCAAGCAATTCTTCTGCCTCAGCTTCACAAGCATGTACCACCATGCCTGGCTATGTCGCTCTGTTGTCTaGTTTATTGGGCCGGGTATT +
Preference number: 5 (lower is better)
Translates to: LKQFFCLSFTSMYHHAWLCRSVV*FIGPGI
Trigger: AATACCCGGCCCAATAAACAAGACAACAGAGCGACA...TAGCCAGGCATGGTGGTACATGCTTGTGAAGCTGAGGCAGAAGAATTGCTTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272321.12
ENST00000409199.5
ENST00000409354.6
CDS-3UTR CAA 90 bp AGTCCTTGCCCATGCCTGTGTCCTGAATGGTATTGCCTAGGTTTTCTTCTAGGGTGTCGCTCTGTTGTCTaGTTTATTGGGCCGGGTATT +
Preference number: 5 (lower is better)
Translates to: SPCPCLCPEWYCLGFLLGCRSVV*FIGPGI
Trigger: AATACCCGGCCCAATAAACAAGACAACAGAGCGACA...CCCTAGAAGAAAACCTAGGCAATACCATTCAGGACACAGGCATGGGCAAGGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS-3UTR CAA 90 bp TTTCCTGTTCTCTGCCGTCTTCTCTCAGTTCTCCGTCTTCTGCATTACAGGTATCCCAGGAGGAGTAGATaGGCTCTGTCCTTCTCAGAA +
Preference number: 5 (lower is better)
Translates to: FPVLCRLLSVLRLLHYRYPRRSR*ALSFSE
Trigger: TTCTGAGAAGGACAGAGCCAATCTACTCCTCCTGGG...ATACCTGTAATGCAGAAGACGGAGAACTGAGAGAAGACGGCAGAGAACAGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409354.6
CDS-3UTR CAA 90 bp TACGGAGTGCTCCACTGTGAACACCTGATAAGGCTGTTTGGTGCCAAAGCGAACCAGCCCAGAATCAGTTaGTCTTCAGTAACATTCCTG +
Preference number: 5 (lower is better)
Translates to: YGVLHCEHLIRLFGAKANQPRIS*SSVTFL
Trigger: CAGGAATGTTACTGAAGACAAACTGATTCTGGGCTG...GTTCGCTTTGGCACCAAACAGCCTTATCAGGTGTTCACAGTGGAGCACTCCGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS-3UTR CAA 90 bp GTGAACCTGTCAGTGCTAGGACAGATACTACCTAGCTGTTCCTGCCTATACCACAGCTATCCATTGCATTaGAACAAGACTGCTGGAGGC +
Preference number: 5 (lower is better)
Translates to: VNLSVLGQILPSCSCLYHSYPLH*NKTAGG
Trigger: GCCTCCAGCAGTCTTGTTCAAATGCAATGGATAGCT...GTGGTATAGGCAGGAACAGCTAGGTAGTATCTGTCCTAGCACTGACAGGTTCAC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR CAA 90 bp CTCAAGCAATTCTTCTGCCTCAGCTTCACAAGCATGTACCACCATGCCTGGCTAAGCTATCCATTGCATTaGAACAAGACTGCTGGAGGC +
Preference number: 5 (lower is better)
Translates to: LKQFFCLSFTSMYHHAWLSYPLH*NKTAGG
Trigger: GCCTCCAGCAGTCTTGTTCAAATGCAATGGATAGCT...TAGCCAGGCATGGTGGTACATGCTTGTGAAGCTGAGGCAGAAGAATTGCTTGAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272321.12
ENST00000409199.5
ENST00000409354.6
CDS-3UTR CAA 90 bp CTCAAGCAATTCTTCTGCCTCAGCTTCACAAGCATGTACCACCATGCCTGGCTACCAGAAGTGGTCTTGTaGGAGCATAGAAGGTTCCAA +
Preference number: 5 (lower is better)
Translates to: LKQFFCLSFTSMYHHAWLPEVVL*EHRRFQ
Trigger: TTGGAACCTTCTATGCTCCAACAAGACCACTTCTGG...TAGCCAGGCATGGTGGTACATGCTTGTGAAGCTGAGGCAGAAGAATTGCTTGAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272321.12
ENST00000409199.5
ENST00000409354.6
CDS-3UTR CAA 90 bp TACGGAGTGCTCCACTGTGAACACCTGATAAGGCTGTTTGGTGCCAAAGCGAACAATCCAGAAGTGGTCTaGTTGGAGCATAGAAGGTTC +
Preference number: 5 (lower is better)
Translates to: YGVLHCEHLIRLFGAKANNPEVV*LEHRRF
Trigger: GAACCTTCTATGCTCCAACAAGACCACTTCTGGATT...GTTCGCTTTGGCACCAAACAGCCTTATCAGGTGTTCACAGTGGAGCACTCCGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS-3UTR CAA 90 bp TCTTCACAGCCCAGAATCAGTTTGTCTTCAGTAACATTCCTGCAGCAGCTGATGAGCTCCTCCAACTCTTaGAGCGAGTCTCGGAGTTTT +
Preference number: 5 (lower is better)
Translates to: SSQPRISLSSVTFLQQLMSSSNS*SESRSF
Trigger: AAAACTCCGAGACTCGCTCAAAGAGTTGGAGGAGCT...CATCAGCTGCTGCAGGAATGTTACTGAAGACAAACTGATTCTGGGCTGTGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS-3UTR CAA 90 bp AATGGTATTTCTAGTTCCAGATCCCTGAGGAATCGCCACACTGACTTCCACAATCACACACCGACTGTTTaGCATCAGCTCCTCCAACTC +
Preference number: 5 (lower is better)
Translates to: NGISSSRSLRNRHTDFHNHTPTV*HQLLQL
Trigger: GAGTTGGAGGAGCTGATGCAAAACAGTCGGTGTGTG...ATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTGGAACTAGAAATACCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS-3UTR CAA 90 bp GATTTCCTGTTCTCTGCCGTCTTCTCTCAGTTCTCCGTCTTCTGCATTACAGGTTGTCGCTCTGTTGTCTaGTTTATTGGGCCGGGTATT +
Preference number: 5 (lower is better)
Translates to: DFLFSAVFSQFSVFCITGCRSVV*FIGPGI
Trigger: AATACCCGGCCCAATAAACAAGACAACAGAGCGACA...ACCTGTAATGCAGAAGACGGAGAACTGAGAGAAGACGGCAGAGAACAGGAAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409354.6
CDS-3UTR CAA 90 bp GTGCCATGGTGGTGTGCTGCACCCATTAACTCGTCATTTAGCATTAGGTATATCCTAGATGTCGCTCTGTaGTCTTGTTTATTGGGCCGG +
Preference number: 5 (lower is better)
Translates to: VPWWCAAPINSSFSIRYILDVAL*SCLLGR
Trigger: CCGGCCCAATAAACAAGACAACAGAGCGACATCTAG...GATATACCTAATGCTAAATGACGAGTTAATGGGTGCAGCACACCACCATGGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS-3UTR CAA 90 bp GTATACATGTGCCATGGTGGTGTGCTGCACCCATTAACTCGTCATTTAGCATTACCCAGGAGGAGTAGATaGGCTCTGTCCTTCTCAGAA +
Preference number: 5 (lower is better)
Translates to: VYMCHGGVLHPLTRHLALPRRSR*ALSFSE
Trigger: TTCTGAGAAGGACAGAGCCAATCTACTCCTCCTGGG...TAATGCTAAATGACGAGTTAATGGGTGCAGCACACCACCATGGCACATGTATAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS-3UTR CAA 90 bp AATGGTATTTCTAGTTCCAGATCCCTGAGGAATCGCCACACTGACTTCCACAATTCAGCCATGGGCTCTTaGTCTACACTTACGGAGTGC +
Preference number: 5 (lower is better)
Translates to: NGISSSRSLRNRHTDFHNSAMGS*STLTEC
Trigger: GCACTCCGTAAGTGTAGACAAAGAGCCCATGGCTGA...ATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTGGAACTAGAAATACCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS-3UTR CAA 90 bp GTGAACCTGTCAGTGCTAGGACAGATACTACCTAGCTGTTCCTGCCTATACCACCAGCCCAGAATCAGTTaGTCTTCAGTAACATTCCTG +
Preference number: 5 (lower is better)
Translates to: VNLSVLGQILPSCSCLYHQPRIS*SSVTFL
Trigger: CAGGAATGTTACTGAAGACAAACTGATTCTGGGCTG...GTGGTATAGGCAGGAACAGCTAGGTAGTATCTGTCCTAGCACTGACAGGTTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR CAA 90 bp CTCAAGCAATTCTTCTGCCTCAGCTTCACAAGCATGTACCACCATGCCTGGCTACAGCCCAGAATCAGTTaGTCTTCAGTAACATTCCTG +
Preference number: 5 (lower is better)
Translates to: LKQFFCLSFTSMYHHAWLQPRIS*SSVTFL
Trigger: CAGGAATGTTACTGAAGACAAACTGATTCTGGGCTG...TAGCCAGGCATGGTGGTACATGCTTGTGAAGCTGAGGCAGAAGAATTGCTTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272321.12
ENST00000409199.5
ENST00000409354.6
CDS-3UTR CAA 90 bp TTTCCTGTTCTCTGCCGTCTTCTCTCAGTTCTCCGTCTTCTGCATTACAGGTATGCAGAATGGCACCACTaGGGTGGCAGCTTATTAATG +
Preference number: 5 (lower is better)
Translates to: FPVLCRLLSVLRLLHYRYAEWHH*GGSLLM
Trigger: CATTAATAAGCTGCCACCCAAGTGGTGCCATTCTGC...ATACCTGTAATGCAGAAGACGGAGAACTGAGAGAAGACGGCAGAGAACAGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409354.6
CDS-3UTR CAA 90 bp CTCAAGCAATTCTTCTGCCTCAGCTTCACAAGCATGTACCACCATGCCTGGCTACTGAGGAGCTATCCATaGCATTTGAACAAGACTGCT +
Preference number: 5 (lower is better)
Translates to: LKQFFCLSFTSMYHHAWLLRSYP*HLNKTA
Trigger: AGCAGTCTTGTTCAAATGCAATGGATAGCTCCTCAG...TAGCCAGGCATGGTGGTACATGCTTGTGAAGCTGAGGCAGAAGAATTGCTTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272321.12
ENST00000409199.5
ENST00000409354.6
CDS-3UTR CAA 90 bp CTCAAGCAATTCTTCTGCCTCAGCTTCACAAGCATGTACCACCATGCCTGGCTAAATCCAGAAGTGGTCTaGTTGGAGCATAGAAGGTTC +
Preference number: 5 (lower is better)
Translates to: LKQFFCLSFTSMYHHAWLNPEVV*LEHRRF
Trigger: GAACCTTCTATGCTCCAACAAGACCACTTCTGGATT...TAGCCAGGCATGGTGGTACATGCTTGTGAAGCTGAGGCAGAAGAATTGCTTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272321.12
ENST00000409199.5
ENST00000409354.6
CDS-3UTR CAA 90 bp CTCAAGCAATTCTTCTGCCTCAGCTTCACAAGCATGTACCACCATGCCTGGCTACAACCCCAGAGGTTATaGATTCTGCATCAATGTCAC +
Preference number: 5 (lower is better)
Translates to: LKQFFCLSFTSMYHHAWLQPQRL*ILHQCH
Trigger: GTGACATTGATGCAGAATCAATAACCTCTGGGGTTG...TAGCCAGGCATGGTGGTACATGCTTGTGAAGCTGAGGCAGAAGAATTGCTTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272321.12
ENST00000409199.5
CDS-3UTR CAA 90 bp GCTTGTCTCAAGCTGTGCTTCTCTCTCTGGAGTGAGCTTCTGTCTAAGAAGATGAGGTCAACAACTGTCTaGATCAGGAGTATGGTGGGT +
Preference number: 5 (lower is better)
Translates to: ACLKLCFSLWSELLSKKMRSTTV*IRSMVG
Trigger: ACCCACCATACTCCTGATCAAGACAGTTGTTGACCT...CATCTTCTTAGACAGAAGCTCACTCCAGAGAGAGAAGCACAGCTTGAGACAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS-3UTR CAA 90 bp TGTGCTTCTCTCTCTGGAGTGAGCTTCTGTCTAAGAAGATGGTTTACAATGGCGGGGACAGTCTGGAGTTaGAGGTCAACAACTGTCTTG +
Preference number: 5 (lower is better)
Translates to: CASLSGVSFCLRRWFTMAGTVWS*RSTTVL
Trigger: CAAGACAGTTGTTGACCTCAAACTCCAGACTGTCCC...CGCCATTGTAAACCATCTTCTTAGACAGAAGCTCACTCCAGAGAGAGAAGCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS TCA 90 bp TCCTGGAGGTCCTTCTTGGTAACCATAGGTAGTTTTCTTAGCAACTaGCCAGCTGGCATGGACTTCATGGTGTTGGAAGGTGAGAGAATA +
Preference number: 5 (lower is better)
Translates to: SWRSFLVTIGSFLSN*PAGMDFMVLEGERI
Trigger: TATTCTCTCACCTTCCAACACCATGAAGTCCATGCCAGCTGGTCAGTTGCTAAGAAAACTACCTATGGTTACCAAGAAGGACCTCCAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467687.1
ENST00000490935.5
CDS GCA 90 bp CTTAGAGACACCAGCACACCTGACAGACATATTTGTTCTTCCATTTaGTCAGCACACACCGACTGTTTTGCATCAGCTCCTCCAACTCTT +
Preference number: 5 (lower is better)
Translates to: LRDTSTPDRHICSSI*SAHTDCFASAPPTL
Trigger: AAGAGTTGGAGGAGCTGATGCAAAACAGTCGGTGTGTGCTGAGCAAATGGAAGAACAAATATGTCTGTCAGGTGTGCTGGTGTCTCTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418148.5
CDS GCA 90 bp TTTGGGACTCTGCTAACACTGCCTCAATTTCAGCCACAGTTTTTCTaGTTGCTGGCATCTCCCAGATCTAGGCTTGTTGTGAACTATGGA +
Preference number: 5 (lower is better)
Translates to: FGTLLTLPQFQPQFF*LLASPRSRLVVNYG
Trigger: TCCATAGTTCACAACAAGCCTAGATCTGGGAGATGCCAGCAAGCAGAAAAACTGTGGCTGAAATTGAGGCAGTGTTAGCAGAGTCCCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484073.1
CDS-3UTR CAA 90 bp GTTCTAAGGGGCAGTCAGGGCAAATTACTCATAGCAGTAATTCGAGAGAACCATAGCTCCTCCAACTCTTaGAGCGAGTCTCGGAGTTTT +
Preference number: 5 (lower is better)
Translates to: VLRGSQGKLLIAVIRENHSSSNS*SESRSF
Trigger: AAAACTCCGAGACTCGCTCAAAGAGTTGGAGGAGCT...ATGGTTCTCTCGAATTACTGCTATGAGTAATTTGCCCTGACTGCCCCTTAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR CAA 90 bp GTATACATGTGCCATGGTGGTGTGCTGCACCCATTAACTCGTCATTTAGCATTAAGCTCCTCCAACTCTTaGAGCGAGTCTCGGAGTTTT +
Preference number: 5 (lower is better)
Translates to: VYMCHGGVLHPLTRHLALSSSNS*SESRSF
Trigger: AAAACTCCGAGACTCGCTCAAAGAGTTGGAGGAGCT...TAATGCTAAATGACGAGTTAATGGGTGCAGCACACCACCATGGCACATGTATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS-3UTR CAA 90 bp CTGATGGCCTTTGACTTTAGTGGTATTCTGGTGACTGACACACACTGGATTTTACACACACCGACTGTTTaGCATCAGCTCCTCCAACTC +
Preference number: 5 (lower is better)
Translates to: LMAFDFSGILVTDTHWILHTPTV*HQLLQL
Trigger: GAGTTGGAGGAGCTGATGCAAAACAGTCGGTGTGTG...TAAAATCCAGTGTGTGTCAGTCACCAGAATACCACTAAAGTCAAAGGCCATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS-3UTR CAA 90 bp GAACTCAAATCTCATATAAAAGTTGATAAGCATGCCTGCCCCTTTCTCCAGAGGCCCAGGAGGAGTAGATaGGCTCTGTCCTTCTCAGAA +
Preference number: 5 (lower is better)
Translates to: ELKSHIKVDKHACPFLQRPRRSR*ALSFSE
Trigger: TTCTGAGAAGGACAGAGCCAATCTACTCCTCCTGGG...CCTCTGGAGAAAGGGGCAGGCATGCTTATCAACTTTTATATGAGATTTGAGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR CAA 90 bp GATTTCCTGTTCTCTGCCGTCTTCTCTCAGTTCTCCGTCTTCTGCATTACAGGTCAGCCCAGAATCAGTTaGTCTTCAGTAACATTCCTG +
Preference number: 5 (lower is better)
Translates to: DFLFSAVFSQFSVFCITGQPRIS*SSVTFL
Trigger: CAGGAATGTTACTGAAGACAAACTGATTCTGGGCTG...ACCTGTAATGCAGAAGACGGAGAACTGAGAGAAGACGGCAGAGAACAGGAAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409354.6
CDS-3UTR CAA 90 bp GTTCTAAGGGGCAGTCAGGGCAAATTACTCATAGCAGTAATTCGAGAGAACCATGCAGAATGGCACCACTaGGGTGGCAGCTTATTAATG +
Preference number: 5 (lower is better)
Translates to: VLRGSQGKLLIAVIRENHAEWHH*GGSLLM
Trigger: CATTAATAAGCTGCCACCCAAGTGGTGCCATTCTGC...ATGGTTCTCTCGAATTACTGCTATGAGTAATTTGCCCTGACTGCCCCTTAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR CAA 90 bp GTGAACCTGTCAGTGCTAGGACAGATACTACCTAGCTGTTCCTGCCTATACCACAGCCATATCAAAAATTaGCAACTCCCCTTGGTTGCT +
Preference number: 5 (lower is better)
Translates to: VNLSVLGQILPSCSCLYHSHIKN*QLPLVA
Trigger: AGCAACCAAGGGGAGTTGCAAATTTTTGATATGGCT...GTGGTATAGGCAGGAACAGCTAGGTAGTATCTGTCCTAGCACTGACAGGTTCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR CAA 90 bp CTCAAGCAATTCTTCTGCCTCAGCTTCACAAGCATGTACCACCATGCCTGGCTAAGCCATATCAAAAATTaGCAACTCCCCTTGGTTGCT +
Preference number: 5 (lower is better)
Translates to: LKQFFCLSFTSMYHHAWLSHIKN*QLPLVA
Trigger: AGCAACCAAGGGGAGTTGCAAATTTTTGATATGGCT...TAGCCAGGCATGGTGGTACATGCTTGTGAAGCTGAGGCAGAAGAATTGCTTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272321.12
ENST00000409199.5
ENST00000409354.6
CDS-3UTR CAA 90 bp TTTCCTGTTCTCTGCCGTCTTCTCTCAGTTCTCCGTCTTCTGCATTACAGGTATAGCTATCCATTGCATTaGAACAAGACTGCTGGAGGC +
Preference number: 5 (lower is better)
Translates to: FPVLCRLLSVLRLLHYRYSYPLH*NKTAGG
Trigger: GCCTCCAGCAGTCTTGTTCAAATGCAATGGATAGCT...ATACCTGTAATGCAGAAGACGGAGAACTGAGAGAAGACGGCAGAGAACAGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409354.6
CDS-3UTR CAA 90 bp GATTTCCTGTTCTCTGCCGTCTTCTCTCAGTTCTCCGTCTTCTGCATTACAGGTCTGAGGAGCTATCCATaGCATTTGAACAAGACTGCT +
Preference number: 5 (lower is better)
Translates to: DFLFSAVFSQFSVFCITGLRSYP*HLNKTA
Trigger: AGCAGTCTTGTTCAAATGCAATGGATAGCTCCTCAG...ACCTGTAATGCAGAAGACGGAGAACTGAGAGAAGACGGCAGAGAACAGGAAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409354.6
CDS-3UTR CAA 90 bp TGCATTCATAGATGCAGCTGTCAGCCATGGGCTCTTTGTCTACACTTACGGAGTCTGAGGAGCTATCCATaGCATTTGAACAAGACTGCT +
Preference number: 5 (lower is better)
Translates to: CIHRCSCQPWALCLHLRSLRSYP*HLNKTA
Trigger: AGCAGTCTTGTTCAAATGCAATGGATAGCTCCTCAG...ACTCCGTAAGTGTAGACAAAGAGCCCATGGCTGACAGCTGCATCTATGAATGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS-3UTR CAA 90 bp CTCAAGCAATTCTTCTGCCTCAGCTTCACAAGCATGTACCACCATGCCTGGCTATGCTCAGGATGTTTATaGCCTCATAGATCTCATCAC +
Preference number: 5 (lower is better)
Translates to: LKQFFCLSFTSMYHHAWLCSGCL*PHRSHH
Trigger: GTGATGAGATCTATGAGGCAATAAACATCCTGAGCA...TAGCCAGGCATGGTGGTACATGCTTGTGAAGCTGAGGCAGAAGAATTGCTTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272321.12
ENST00000409199.5
ENST00000409354.6
CDS-3UTR CAA 90 bp TGTGCTTCTCTCTCTGGAGTGAGCTTCTGTCTAAGAAGATGGTTTACAATGGCGCCAGAAGTGGTCTTGTaGGAGCATAGAAGGTTCCAA +
Preference number: 5 (lower is better)
Translates to: CASLSGVSFCLRRWFTMAPEVVL*EHRRFQ
Trigger: TTGGAACCTTCTATGCTCCAACAAGACCACTTCTGG...CGCCATTGTAAACCATCTTCTTAGACAGAAGCTCACTCCAGAGAGAGAAGCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS-3UTR CAA 90 bp GTGCCATGGTGGTGTGCTGCACCCATTAACTCGTCATTTAGCATTAGGTATATCGTCTGTTCATATCCTTaGCCCACTTTTGGATGGGGT +
Preference number: 5 (lower is better)
Translates to: VPWWCAAPINSSFSIRYIVCSYP*PTFGWG
Trigger: ACCCCATCCAAAAGTGGGCAAAGGATATGAACAGAC...GATATACCTAATGCTAAATGACGAGTTAATGGGTGCAGCACACCACCATGGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS-3UTR CAA 90 bp AGTCCTTGCCCATGCCTGTGTCCTGAATGGTATTGCCTAGGTTTTCTTCTAGGGCCTCTCCAGCACATGTaGTTTGCTGACTTTTTAATG +
Preference number: 5 (lower is better)
Translates to: SPCPCLCPEWYCLGFLLGPLQHM*FADFLM
Trigger: CATTAAAAAGTCAGCAAACAACATGTGCTGGAGAGG...CCCTAGAAGAAAACCTAGGCAATACCATTCAGGACACAGGCATGGGCAAGGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS GCA 90 bp CACCTGAACCAAAAAGGAGCTGACAGACATATTTGTTCTTCCATTTaGTCAGCACACACCGACTGTTTTGCATCAGCTCCTGAAGCACAA +
Preference number: 5 (lower is better)
Translates to: HLNQKGADRHICSSI*SAHTDCFASAPEAQ
Trigger: TTGTGCTTCAGGAGCTGATGCAAAACAGTCGGTGTGTGCTGAGCAAATGGAAGAACAAATATGTCTGTCAGCTCCTTTTTGGTTCAGGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493315.1
CDS-3UTR CAA 90 bp CTCAAGCAATTCTTCTGCCTCAGCTTCACAAGCATGTACCACCATGCCTGGCTACTGTTGTCTTGTTTATaGGGCCGGGTATTTCATAAT +
Preference number: 5 (lower is better)
Translates to: LKQFFCLSFTSMYHHAWLLLSCL*GRVFHN
Trigger: ATTATGAAATACCCGGCCCAATAAACAAGACAACAG...TAGCCAGGCATGGTGGTACATGCTTGTGAAGCTGAGGCAGAAGAATTGCTTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272321.12
ENST00000409199.5
ENST00000409354.6
CDS-3UTR CAA 90 bp ATTCTTCAAAGACCACAGGTGCAGTTCAGTCAAGCAGAAAGACATCTGATGGCATGTCGCTCTGTTGTCTaGTTTATTGGGCCGGGTATT +
Preference number: 5 (lower is better)
Translates to: ILQRPQVQFSQAERHLMACRSVV*FIGPGI
Trigger: AATACCCGGCCCAATAAACAAGACAACAGAGCGACA...TGCCATCAGATGTCTTTCTGCTTGACTGAACTGCACCTGTGGTCTTTGAAGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS-3UTR CAA 90 bp CTGCTGGCAACAAAACCTCATTTTTGTTTATTCGGTGATACTCCCTCTTTCCAACCCAGGAGGAGTAGATaGGCTCTGTCCTTCTCAGAA +
Preference number: 5 (lower is better)
Translates to: LLATKPHFCLFGDTPSFQPRRSR*ALSFSE
Trigger: TTCTGAGAAGGACAGAGCCAATCTACTCCTCCTGGG...TTGGAAAGAGGGAGTATCACCGAATAAACAAAAATGAGGTTTTGTTGCCAGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS-3UTR CAA 90 bp GAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCACATCTGCAACTCCCCTTGGTaGCTGCCAACTAGCAGAATG +
Preference number: 5 (lower is better)
Translates to: ELVYSPTNSVKVFLFLHICNSPW*LPTSRM
Trigger: CATTCTGCTAGTTGGCAGCAACCAAGGGGAGTTGCA...GATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS-3UTR CAA 90 bp GATTTCCTGTTCTCTGCCGTCTTCTCTCAGTTCTCCGTCTTCTGCATTACAGGTAGCCATATCAAAAATTaGCAACTCCCCTTGGTTGCT +
Preference number: 5 (lower is better)
Translates to: DFLFSAVFSQFSVFCITGSHIKN*QLPLVA
Trigger: AGCAACCAAGGGGAGTTGCAAATTTTTGATATGGCT...ACCTGTAATGCAGAAGACGGAGAACTGAGAGAAGACGGCAGAGAACAGGAAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409354.6
CDS-3UTR CAA 90 bp AATGGTATTTCTAGTTCCAGATCCCTGAGGAATCGCCACACTGACTTCCACAATAGCTATCCATTGCATTaGAACAAGACTGCTGGAGGC +
Preference number: 5 (lower is better)
Translates to: NGISSSRSLRNRHTDFHNSYPLH*NKTAGG
Trigger: GCCTCCAGCAGTCTTGTTCAAATGCAATGGATAGCT...ATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTGGAACTAGAAATACCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS-3UTR CAA 90 bp GTTCTAAGGGGCAGTCAGGGCAAATTACTCATAGCAGTAATTCGAGAGAACCATCCAGAAGTGGTCTTGTaGGAGCATAGAAGGTTCCAA +
Preference number: 5 (lower is better)
Translates to: VLRGSQGKLLIAVIRENHPEVVL*EHRRFQ
Trigger: TTGGAACCTTCTATGCTCCAACAAGACCACTTCTGG...ATGGTTCTCTCGAATTACTGCTATGAGTAATTTGCCCTGACTGCCCCTTAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR CAA 90 bp AATGGTATTTCTAGTTCCAGATCCCTGAGGAATCGCCACACTGACTTCCACAATCCAGAAGTGGTCTTGTaGGAGCATAGAAGGTTCCAA +
Preference number: 5 (lower is better)
Translates to: NGISSSRSLRNRHTDFHNPEVVL*EHRRFQ
Trigger: TTGGAACCTTCTATGCTCCAACAAGACCACTTCTGG...ATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTGGAACTAGAAATACCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS-3UTR CAA 90 bp GGGAAACAGTATCTGTGTTCTAAGGGGCAGTCAGGGCAAATTACTCATAGCAGTAATCCAGAAGTGGTCTaGTTGGAGCATAGAAGGTTC +
Preference number: 5 (lower is better)
Translates to: GKQYLCSKGQSGQITHSSNPEVV*LEHRRF
Trigger: GAACCTTCTATGCTCCAACAAGACCACTTCTGGATT...ACTGCTATGAGTAATTTGCCCTGACTGCCCCTTAGAACACAGATACTGTTTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR CAA 90 bp TTTCCTGTTCTCTGCCGTCTTCTCTCAGTTCTCCGTCTTCTGCATTACAGGTATAATCCAGAAGTGGTCTaGTTGGAGCATAGAAGGTTC +
Preference number: 5 (lower is better)
Translates to: FPVLCRLLSVLRLLHYRYNPEVV*LEHRRF
Trigger: GAACCTTCTATGCTCCAACAAGACCACTTCTGGATT...ATACCTGTAATGCAGAAGACGGAGAACTGAGAGAAGACGGCAGAGAACAGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409354.6
CDS-3UTR CAA 90 bp GTGAACCTGTCAGTGCTAGGACAGATACTACCTAGCTGTTCCTGCCTATACCACGAGAACCATGGAGAATaGTCTTCTAACAATGGATCT +
Preference number: 5 (lower is better)
Translates to: VNLSVLGQILPSCSCLYHENHGE*SSNNGS
Trigger: AGATCCATTGTTAGAAGACAATTCTCCATGGTTCTC...GTGGTATAGGCAGGAACAGCTAGGTAGTATCTGTCCTAGCACTGACAGGTTCAC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR CAA 90 bp ATTCTTCAAAGACCACAGGTGCAGTTCAGTCAAGCAGAAAGACATCTGATGGCATGTTATGGTCTTTCCTaGAGCTCTGAGCTCTGCAGA +
Preference number: 5 (lower is better)
Translates to: ILQRPQVQFSQAERHLMACYGLS*SSELCR
Trigger: TCTGCAGAGCTCAGAGCTCAAGGAAAGACCATAACA...TGCCATCAGATGTCTTTCTGCTTGACTGAACTGCACCTGTGGTCTTTGAAGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS-3UTR CAA 90 bp AATGGTATTTCTAGTTCCAGATCCCTGAGGAATCGCCACACTGACTTCCACAATTGTCCTTGCGGTAGTTaGCTGAGAATGATGGTTTCC +
Preference number: 5 (lower is better)
Translates to: NGISSSRSLRNRHTDFHNCPCGS*LRMMVS
Trigger: GGAAACCATCATTCTCAGCAAACTACCGCAAGGACA...ATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTGGAACTAGAAATACCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS-3UTR CAA 90 bp GTGCCATGGTGGTGTGCTGCACCCATTAACTCGTCATTTAGCATTAGGTATATCGTGATGTTCCCCTTCTaGTGTCCATGTGTTCTCATT +
Preference number: 5 (lower is better)
Translates to: VPWWCAAPINSSFSIRYIVMFPF*CPCVLI
Trigger: AATGAGAACACATGGACACAAGAAGGGGAACATCAC...GATATACCTAATGCTAAATGACGAGTTAATGGGTGCAGCACACCACCATGGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS-3UTR CAA 90 bp CTCAAGCAATTCTTCTGCCTCAGCTTCACAAGCATGTACCACCATGCCTGGCTAAGTTTTTCCAGTCTTTaGTTTACATCAGAAGACTCC +
Preference number: 5 (lower is better)
Translates to: LKQFFCLSFTSMYHHAWLSFSSL*FTSEDS
Trigger: GGAGTCTTCTGATGTAAACAAAAGACTGGAAAAACT...TAGCCAGGCATGGTGGTACATGCTTGTGAAGCTGAGGCAGAAGAATTGCTTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000272321.12
ENST00000409199.5
CDS-3UTR CAA 90 bp GATTTCCTGTTCTCTGCCGTCTTCTCTCAGTTCTCCGTCTTCTGCATTACAGGTCTGTTGTCTTGTTTATaGGGCCGGGTATTTCATAAT +
Preference number: 5 (lower is better)
Translates to: DFLFSAVFSQFSVFCITGLLSCL*GRVFHN
Trigger: ATTATGAAATACCCGGCCCAATAAACAAGACAACAG...ACCTGTAATGCAGAAGACGGAGAACTGAGAGAAGACGGCAGAGAACAGGAAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409354.6
CDS-3UTR CAA 90 bp GAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCACATCGCAGAATGGCACCACTaGGGTGGCAGCTTATTAATG +
Preference number: 5 (lower is better)
Translates to: ELVYSPTNSVKVFLFLHIAEWHH*GGSLLM
Trigger: CATTAATAAGCTGCCACCCAAGTGGTGCCATTCTGC...GATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS-3UTR CAA 90 bp GTGCCATGGTGGTGTGCTGCACCCATTAACTCGTCATTTAGCATTAGGTATATCAGCCATATCAAAAATTaGCAACTCCCCTTGGTTGCT +
Preference number: 5 (lower is better)
Translates to: VPWWCAAPINSSFSIRYISHIKN*QLPLVA
Trigger: AGCAACCAAGGGGAGTTGCAAATTTTTGATATGGCT...GATATACCTAATGCTAAATGACGAGTTAATGGGTGCAGCACACCACCATGGCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS-3UTR CAA 90 bp TGTGCTTCTCTCTCTGGAGTGAGCTTCTGTCTAAGAAGATGGTTTACAATGGCGTGCTCAGGATGTTTATaGCCTCATAGATCTCATCAC +
Preference number: 5 (lower is better)
Translates to: CASLSGVSFCLRRWFTMACSGCL*PHRSHH
Trigger: GTGATGAGATCTATGAGGCAATAAACATCCTGAGCA...CGCCATTGTAAACCATCTTCTTAGACAGAAGCTCACTCCAGAGAGAGAAGCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS-3UTR CAA 90 bp CTCAAGCAATTCTTCTGCCTCAGCTTCACAAGCATGTACCACCATGCCTGGCTACCTTCTGTCAATTATTaGTCTGTTAGAAGAGCCATT +
Preference number: 5 (lower is better)
Translates to: LKQFFCLSFTSMYHHAWLPSVNY*SVRRAI
Trigger: AATGGCTCTTCTAACAGACAAATAATTGACAGAAGG...TAGCCAGGCATGGTGGTACATGCTTGTGAAGCTGAGGCAGAAGAATTGCTTGAG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272321.12
ENST00000409199.5
ENST00000409354.6
CDS-3UTR CAA 90 bp TCTTCACAGCCCAGAATCAGTTTGTCTTCAGTAACATTCCTGCAGCAGCTGATGCTGTTGTCTTGTTTATaGGGCCGGGTATTTCATAAT +
Preference number: 5 (lower is better)
Translates to: SSQPRISLSSVTFLQQLMLLSCL*GRVFHN
Trigger: ATTATGAAATACCCGGCCCAATAAACAAGACAACAG...CATCAGCTGCTGCAGGAATGTTACTGAAGACAAACTGATTCTGGGCTGTGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS-3UTR CAA 90 bp GTGCTAAGAGAGTCACTCTACGGTGAGTTTCATAAAGAATTAGCGAAGAATCTTGCAGAATGGCACCACTaGGGTGGCAGCTTATTAATG +
Preference number: 5 (lower is better)
Translates to: VLRESLYGEFHKELAKNLAEWHH*GGSLLM
Trigger: CATTAATAAGCTGCCACCCAAGTGGTGCCATTCTGC...AAGATTCTTCGCTAATTCTTTATGAAACTCACCGTAGAGTGACTCTCTTAGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS-3UTR CAA 90 bp GTATACATGTGCCATGGTGGTGTGCTGCACCCATTAACTCGTCATTTAGCATTATGCTCAGGATGTTTATaGCCTCATAGATCTCATCAC +
Preference number: 5 (lower is better)
Translates to: VYMCHGGVLHPLTRHLALCSGCL*PHRSHH
Trigger: GTGATGAGATCTATGAGGCAATAAACATCCTGAGCA...TAATGCTAAATGACGAGTTAATGGGTGCAGCACACCACCATGGCACATGTATAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS-3UTR CAA 90 bp ATTCTTCAAAGACCACAGGTGCAGTTCAGTCAAGCAGAAAGACATCTGATGGCAAGTGCCTTCAGAGAGTaGTGGGTTTTCTGTATTTTG +
Preference number: 5 (lower is better)
Translates to: ILQRPQVQFSQAERHLMASAFRE*WVFCIL
Trigger: CAAAATACAGAAAACCCACAACTCTCTGAAGGCACT...TGCCATCAGATGTCTTTCTGCTTGACTGAACTGCACCTGTGGTCTTTGAAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS-3UTR CAA 90 bp GGACAGATACTACCTAGCTGTTCCTGCCTATACCACTCTTCTTACTTTAGAGCTCTGTTGTCTTGTTTATaGGGCCGGGTATTTCATAAT +
Preference number: 5 (lower is better)
Translates to: GQILPSCSCLYHSSYFRALLSCL*GRVFHN
Trigger: ATTATGAAATACCCGGCCCAATAAACAAGACAACAG...AGCTCTAAAGTAAGAAGAGTGGTATAGGCAGGAACAGCTAGGTAGTATCTGTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR CAA 90 bp AATGGTATTTCTAGTTCCAGATCCCTGAGGAATCGCCACACTGACTTCCACAATCTGTTGTCTTGTTTATaGGGCCGGGTATTTCATAAT +
Preference number: 5 (lower is better)
Translates to: NGISSSRSLRNRHTDFHNLLSCL*GRVFHN
Trigger: ATTATGAAATACCCGGCCCAATAAACAAGACAACAG...ATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTGGAACTAGAAATACCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS-3UTR CAA 90 bp GAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCACATCCAGCCCAGAATCAGTTaGTCTTCAGTAACATTCCTG +
Preference number: 5 (lower is better)
Translates to: ELVYSPTNSVKVFLFLHIQPRIS*SSVTFL
Trigger: CAGGAATGTTACTGAAGACAAACTGATTCTGGGCTG...GATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS-3UTR CAA 90 bp GAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCACATCCTGAGGAGCTATCCATaGCATTTGAACAAGACTGCT +
Preference number: 5 (lower is better)
Translates to: ELVYSPTNSVKVFLFLHILRSYP*HLNKTA
Trigger: AGCAGTCTTGTTCAAATGCAATGGATAGCTCCTCAG...GATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS-3UTR CAA 90 bp TTTCCTGTTCTCTGCCGTCTTCTCTCAGTTCTCCGTCTTCTGCATTACAGGTATCCTTCTGTCAATTATTaGTCTGTTAGAAGAGCCATT +
Preference number: 5 (lower is better)
Translates to: FPVLCRLLSVLRLLHYRYPSVNY*SVRRAI
Trigger: AATGGCTCTTCTAACAGACAAATAATTGACAGAAGG...ATACCTGTAATGCAGAAGACGGAGAACTGAGAGAAGACGGCAGAGAACAGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409354.6
CDS-3UTR CAA 90 bp CTGATGGCCTTTGACTTTAGTGGTATTCTGGTGACTGACACACACTGGATTTTATTGATTTTGACCATGTaGGTAAAGGCTGTCCTCATC +
Preference number: 5 (lower is better)
Translates to: LMAFDFSGILVTDTHWILLILTM*VKAVLI
Trigger: GATGAGGACAGCCTTTACCAACATGGTCAAAATCAA...TAAAATCCAGTGTGTGTCAGTCACCAGAATACCACTAAAGTCAAAGGCCATCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS-3UTR CAA 90 bp GGACAGATACTACCTAGCTGTTCCTGCCTATACCACTCTTCTTACTTTAGAGCTAGTTTTTCCAGTCTTTaGTTTACATCAGAAGACTCC +
Preference number: 5 (lower is better)
Translates to: GQILPSCSCLYHSSYFRASFSSL*FTSEDS
Trigger: GGAGTCTTCTGATGTAAACAAAAGACTGGAAAAACT...AGCTCTAAAGTAAGAAGAGTGGTATAGGCAGGAACAGCTAGGTAGTATCTGTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272321.12
CDS-3UTR CAA 90 bp GTATACATGTGCCATGGTGGTGTGCTGCACCCATTAACTCGTCATTTAGCATTAAGTTTTTCCAGTCTTTaGTTTACATCAGAAGACTCC +
Preference number: 5 (lower is better)
Translates to: VYMCHGGVLHPLTRHLALSFSSL*FTSEDS
Trigger: GGAGTCTTCTGATGTAAACAAAAGACTGGAAAAACT...TAATGCTAAATGACGAGTTAATGGGTGCAGCACACCACCATGGCACATGTATAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS GCA 90 bp CCTAACAGATTCCAGGCACATGATTCAGAAAAGAAACTGAAGAGTTaGTTTGCATTTACTGTTAGAACTCTTGTCCTAGTCACCAGAAAG +
Preference number: 5 (lower is better)
Translates to: PNRFQAHDSEKKLKS*FAFTVRTLVLVTRK
Trigger: CTTTCTGGTGACTAGGACAAGAGTTCTAACAGTAAATGCAAAGCAACTCTTCAGTTTCTTTTCTGAATCATGTGCCTGGAATCTGTTAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409120.5
CDS GCA 90 bp CGACAAGGCAAGACTCCATCTGAGCAAGTGATGGAAGAATCTCCTTaGATATTTGCTGATTTGATCTCTATATTCCAATATAGTGGAATC +
Preference number: 5 (lower is better)
Translates to: RQGKTPSEQVMEESP*IFADLISIFQYSGI
Trigger: GATTCCACTATATTGGAATATAGAGATCAAATCAGCAAATATGCAAGGAGATTCTTCCATCACTTGCTCAGATGGAGTCTTGCCTTGTCG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409835.5
CDS-3UTR CAA 90 bp TCCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGAAATCCAGAAGTGGTCTaGTTGGAGCATAGAAGGTTC +
Preference number: 5 (lower is better)
Translates to: STLMVVSFAVQKLFSLIRNPEVV*LEHRRF
Trigger: GAACCTTCTATGCTCCAACAAGACCACTTCTGGATT...TCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS-3UTR CAA 90 bp TCCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGAGTCTATATCTCTGTTTaGGGACCAGTACCATGCTGT +
Preference number: 5 (lower is better)
Translates to: STLMVVSFAVQKLFSLIRVYISV*GPVPCC
Trigger: ACAGCATGGTACTGGTCCCAAAACAGAGATATAGAC...TCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409562.7
CDS GCA 90 bp CTTTTCAAACCTCTGGTACCTGAGCAAGTGATGGAAGAATCTCCTTaGATATTTGCTGATTTGATCTCTATATTCCAATATAGTGGAATC +
Preference number: 5 (lower is better)
Translates to: LFKPLVPEQVMEESP*IFADLISIFQYSGI
Trigger: GATTCCACTATATTGGAATATAGAGATCAAATCAGCAAATATGCAAGGAGATTCTTCCATCACTTGCTCAGGTACCAGAGGTTTGAAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000272321.12
ENST00000398544.7
ENST00000409120.5
ENST00000409199.5
ENST00000409354.6
ENST00000409562.7
CDS-3UTR CAA 90 bp GTGCTAAGAGAGTCACTCTACGGTGAGTTTCATAAAGAATTAGCGAAGAATCTTAGTTTTTCCAGTCTTTaGTTTACATCAGAAGACTCC +
Preference number: 5 (lower is better)
Translates to: VLRESLYGEFHKELAKNLSFSSL*FTSEDS
Trigger: GGAGTCTTCTGATGTAAACAAAAGACTGGAAAAACT...AAGATTCTTCGCTAATTCTTTATGAAACTCACCGTAGAGTGACTCTCTTAGCAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS GCA 90 bp ATCCAAACATATCATTCACCTGAGCAAGTGATGGAAGAATCTCCTTaGATATTTGCTGATTTGATCTCTATATTCCAATATAGTGGAATC +
Preference number: 5 (lower is better)
Translates to: IQTYHSPEQVMEESP*IFADLISIFQYSGI
Trigger: GATTCCACTATATTGGAATATAGAGATCAAATCAGCAAATATGCAAGGAGATTCTTCCATCACTTGCTCAGGTGAATGATATGTTTGGAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462652.1
CDS GCA 72 bp CCAGGACGCCGCCGCCGCCGCCACAGTTTCCTCAGGTaGTACAAAGCAGCCAGGGTGTGCGTGCGCTCCCGC +
Preference number: 6 (lower is better)
Translates to: PGRRRRRHSFLR*YKAARVCVRSR
Trigger: GCGGGAGCGCACGCACACCCTGGCTGCTTTGTAGCACCTGAGGAAACTGTGGCGGCGGCGGCGGCGTCCTGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000272321.12
ENST00000409562.7
ENST00000409835.5
ENST00000417238.5
ENST00000431065.1
ENST00000484073.1
CDS CCA 72 bp TCGGGAGTGGGGAAGAAGCGCGACTCCCGGCCGCTTTaGAGTAGGCGTCCCAGCAAAACTCTCGCCTCATCA +
Preference number: 6 (lower is better)
Translates to: SGVGKKRDSRPL*SRRPSKTLASS
Trigger: TGATGAGGCGAGAGTTTTGCTGGGACGCCTACTCCAAAGCGGCCGGGAGTCGCGCTTCTTCCCCACTCCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000272321.12
ENST00000409562.7
ENST00000409835.5
ENST00000417238.5
ENST00000431065.1
ENST00000484073.1
CDS GCA 72 bp GTTTCCTCAGGTGCTACAAAGCAGCCAGGGTGTGCGTaGGCTCCCGCCTCGTCGCTTAGCAACCTGAGAAGC +
Preference number: 6 (lower is better)
Translates to: VSSGATKQPGCA*APASSLSNLRS
Trigger: GCTTCTCAGGTTGCTAAGCGACGAGGCGGGAGCGCACGCACACCCTGGCTGCTTTGTAGCACCTGAGGAAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000272321.12
ENST00000409562.7
ENST00000409835.5
ENST00000417238.5
ENST00000431065.1
ENST00000484073.1
CDS TCA 72 bp GGTGTGCGTGCGCTCCCGCCTCGTCGCTTAGCAACCTaGGAAGCTGTCCGGTCGTCCCAACTTATCAATTCC +
Preference number: 6 (lower is better)
Translates to: GVRALPPRRLAT*EAVRSSQLINS
Trigger: GGAATTGATAAGTTGGGACGACCGGACAGCTTCTCAGGTTGCTAAGCGACGAGGCGGGAGCGCACGCACACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409562.7
ENST00000409835.5
ENST00000417238.5
ENST00000431065.1
ENST00000484073.1
CDS CCA 72 bp AGCGGAAGGTCTCTTTACCTCCCACGTTTACCCTCATaGGAGGATGCAGTCTCAGTCACGCGCGTGGGGGTG +
Preference number: 6 (lower is better)
Translates to: SGRSLYLPRLPS*EDAVSVTRVGV
Trigger: CACCCCCACGCGCGTGACTGAGACTGCATCCTCCCATGAGGGTAAACGTGGGAGGTAAAGAGACCTTCCGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431065.1
CDS GCA 72 bp CTCCCTAGAGTTACACACGCTATCTCTCCCGCCAATTaGCGGGCTCCATCAGGCAGGTCCTTTCCTCCTGAG +
Preference number: 6 (lower is better)
Translates to: LPRVTHAISPAN*RAPSGRSFPPE
Trigger: CTCAGGAGGAAAGGACCTGCCTGATGGAGCCCGGCAATTGGCGGGAGAGATAGCGTGTGTAACTCTAGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431065.1
CDS GCA 72 bp GTCTCTTTACCTCCCACGTTTACCCTCATGGGAGGATaGAGTCTCAGTCACGCGCGTGGGGGTGATGTCGCT +
Preference number: 6 (lower is better)
Translates to: VSLPPTFTLMGG*SLSHARGGDVA
Trigger: AGCGACATCACCCCCACGCGCGTGACTGAGACTGCATCCTCCCATGAGGGTAAACGTGGGAGGTAAAGAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431065.1
CDS TCA 72 bp CAATTGCCGGGCTCCATCAGGCAGGTCCTTTCCTCCTaGGCCCAAACCATCCGTTTGTTGTCGTCCTCCAAT +
Preference number: 6 (lower is better)
Translates to: QLPGSIRQVLSS*AQTIRLLSSSN
Trigger: ATTGGAGGACGACAACAAACGGATGGTTTGGGCTCAGGAGGAAAGGACCTGCCTGATGGAGCCCGGCAATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431065.1
CDS CCA 72 bp TTGTCCAGAATTTATCATGGTTTTCTGTCTCGGGAGTaGGGAAGAAGCGCGACTCCCGGCCGCTTTGGAGTA +
Preference number: 6 (lower is better)
Translates to: LSRIYHGFLSRE*GRSATPGRFGV
Trigger: TACTCCAAAGCGGCCGGGAGTCGCGCTTCTTCCCCACTCCCGAGACAGAAAACCATGATAAATTCTGGACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS CAA 90 bp GGGACTCTGCTAACACTGCCTCAATTTCAGCCACAGTTTTTCTGCTaGCTGGCATCTCCCAGATCTAGGCTTGTTGTGAACTATGGACCC +
Preference number: 6 (lower is better)
Translates to: GTLLTLPQFQPQFFC*LASPRSRLVVNYGP
Trigger: GGGTCCATAGTTCACAACAAGCCTAGATCTGGGAGATGCCAGCAAGCAGAAAAACTGTGGCTGAAATTGAGGCAGTGTTAGCAGAGTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484073.1
CDS GCA 72 bp GTTCCTTCTGCAGCATCCCTTCAAGCATCTAGCCCATaGTTGAATATTGCCAGTGATCAGGAGCTCACTGCT +
Preference number: 6 (lower is better)
Translates to: VPSAASLQASSP*LNIASDQELTA
Trigger: AGCAGTGAGCTCCTGATCACTGGCAATATTCAAGCATGGGCTAGATGCTTGAAGGGATGCTGCAGAAGGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409120.5
CDS CAA 72 bp CCTTCTGCAGCATCCCTTCAAGCATCTAGCCCATGCTaGAATATTGCCAGTGATCAGGAGCTCACTGCTTCA +
Preference number: 6 (lower is better)
Translates to: PSAASLQASSPC*NIASDQELTAS
Trigger: TGAAGCAGTGAGCTCCTGATCACTGGCAATATTCAAGCATGGGCTAGATGCTTGAAGGGATGCTGCAGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409120.5
CDS TCA 72 bp TCTGCTTGCTGGCATCTCCCAGATCTAGGCTTGTTGTaGACTATGGACCCAGTTTCCTTGAAGTTTTCATCC +
Preference number: 6 (lower is better)
Translates to: SACWHLPDLGLL*TMDPVSLKFSS
Trigger: GGATGAAAACTTCAAGGAAACTGGGTCCATAGTTCACAACAAGCCTAGATCTGGGAGATGCCAGCAAGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484073.1
CDS GCA 72 bp CTCCCTCTTTCCAAGTATAGACTTCCTTTCAGTTTATaGCTGCTATGGTCACTCTCCAGTGCCTTCAGAGAG +
Preference number: 6 (lower is better)
Translates to: LPLSKYRLPFSL*LLWSLSSAFRE
Trigger: CTCTCTGAAGGCACTGGAGAGTGACCATAGCAGGCATAAACTGAAAGGAAGTCTATACTTGGAAAGAGGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS CAA 72 bp CTAACACTGCCTCAATTTCAGCCACAGTTTTTCTGCTaGCTGGCATCTCCCAGATCTAGGCTTGTTGTGAAC +
Preference number: 6 (lower is better)
Translates to: LTLPQFQPQFFC*LASPRSRLVVN
Trigger: GTTCACAACAAGCCTAGATCTGGGAGATGCCAGCAAGCAGAAAAACTGTGGCTGAAATTGAGGCAGTGTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484073.1
CDS TCA 72 bp AAATGTCAATATGCTCTGTTAGAATGTGGGCTCCCTTaGGGGCAGGGCACTTTGTTTTGTCCACAGATGTCT +
Preference number: 6 (lower is better)
Translates to: KCQYALLECGLP*GQGTLFCPQMS
Trigger: AGACATCTGTGGACAAAACAAAGTGCCCTGCCCTCAAGGGAGCCCACATTCTAACAGAGCATATTGACATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467687.1
ENST00000490935.5
CDS GCA 72 bp TCCTTTCAGTTTATGCCTGCTATGGTCACTCTCCAGTaGCTTCAGAGAGTTGTGGGTTTTCTGTATTTTGTC +
Preference number: 6 (lower is better)
Translates to: SFQFMPAMVTLQ*LQRVVGFLYFV
Trigger: GACAAAATACAGAAAACCCACAACTCTCTGAAGGCACTGGAGAGTGACCATAGCAGGCATAAACTGAAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS GCA 72 bp CTCTTTCCAAGTATAGACTTCCTTTCAGTTTATGCCTaGTATGGTCACTCTCCAGTGCCTTCAGAGAGTTGT +
Preference number: 6 (lower is better)
Translates to: LFPSIDFLSVYA*YGHSPVPSESC
Trigger: ACAACTCTCTGAAGGCACTGGAGAGTGACCATAGCAGGCATAAACTGAAAGGAAGTCTATACTTGGAAAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS CAA 72 bp TTACTCACTGACTACCAGCTCCTTATGGATGTTGGCTaGGCCACATTTATCTTTGTAGTGCCAGGAATACAG +
Preference number: 6 (lower is better)
Translates to: LLTDYQLLMDVG*ATFIFVVPGIQ
Trigger: CTGTATTCCTGGCACTACAAAGATAAATGTGGCCAAGCCAACATCCATAAGGAGCTGGTAGTCAGTGAGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409120.5
CDS TCA 72 bp GAATCTCTATCTTCTTATAGTGATCCTTGGGCAATCTaGAGTTTCCTGGAGGTCCTTCTTGGTAACCATAGG +
Preference number: 6 (lower is better)
Translates to: ESLSSYSDPWAI*SFLEVLLGNHR
Trigger: CCTATGGTTACCAAGAAGGACCTCCAGGAAACTTCAGATTGCCCAAGGATCACTATAAGAAGATAGAGATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467687.1
ENST00000490935.5
CDS CAA 72 bp TGCCTGCTATGGTCACTCTCCAGTGCCTTCAGAGAGTaGTGGGTTTTCTGTATTTTGTCCAGAATTTATCAT +
Preference number: 6 (lower is better)
Translates to: CLLWSLSSAFRE*WVFCILSRIYH
Trigger: ATGATAAATTCTGGACAAAATACAGAAAACCCACAACTCTCTGAAGGCACTGGAGAGTGACCATAGCAGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417238.5
CDS CAA 90 bp CTTGTTGTGAACTATGGACCCAGTTTCCTTGAAGTTTTCATCCAGTaGTTAATTCAATGTCTGTGGGGAACCTCCTTCTTACGACAGGAA +
Preference number: 6 (lower is better)
Translates to: LVVNYGPSFLEVFIQ*LIQCLWGTSFLRQE
Trigger: TTCCTGTCGTAAGAAGGAGGTTCCCCACAGACATTGAATTAACAACTGGATGAAAACTTCAAGGAAACTGGGTCCATAGTTCACAACAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484073.1
CDS CCA 72 bp AGCCATCATTCACATGCAATGAGAGGTGCAATGCATTaGGGTTGGCAAAGTCTTTTAAAAATGTCAATATGC +
Preference number: 6 (lower is better)
Translates to: SHHSHAMRGAMH*GWQSLLKMSIC
Trigger: GCATATTGACATTTTTAAAAGACTTTGCCAACCCCAATGCATTGCACCTCTCATTGCATGTGAATGATGGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467687.1
CDS GCA 72 bp TTCCAGGCACATGATTCAGAAAAGAAACTGAAGAGTTaGTTTGCATTTACTGTTAGAACTCTTGTCCTAGTC +
Preference number: 6 (lower is better)
Translates to: FQAHDSEKKLKS*FAFTVRTLVLV
Trigger: GACTAGGACAAGAGTTCTAACAGTAAATGCAAAGCAACTCTTCAGTTTCTTTTCTGAATCATGTGCCTGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409120.5
CDS CAA 72 bp CAGGAAGTGAGTTTTCTTGTTTCTGTCATCGTGAGTTaGAGTTCGGCTAACCAGATAGCACAATTAACTTTT +
Preference number: 6 (lower is better)
Translates to: QEVSFLVSVIVS*SSANQIAQLTF
Trigger: AAAAGTTAATTGTGCTATCTGGTTAGCCGAACTCAAACTCACGATGACAGAAACAAGAAAACTCACTTCCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484073.1
CDS CAA 72 bp AAAGCAGAGAAAATGGGGTATGGTGAAGCTAGAAACTaGCCACATTATATAAGCAGACAATGGACAAGTTTT +
Preference number: 6 (lower is better)
Translates to: KAEKMGYGEARN*PHYISRQWTSF
Trigger: AAAACTTGTCCATTGTCTGCTTATATAATGTGGCAAGTTTCTAGCTTCACCATACCCCATTTTCTCTGCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462652.1