RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for WDFY4 (Homo sapiens)

Ensembl gene IDs: ENSG00000128815

Ensembl transcript IDs: ENST00000325239.11, ENST00000360890.6, ENST00000374161.7, ENST00000465910.5, ENST00000490507.1, ENST00000497480.1

Found 898 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GAAGTCCCATCGGCCATGGAGAGGGTTGGGCTGCAGAGCTGTGATTaGCAGAGGCCCTTCCTTGAGAACTGTGGGGAAGGAGGCCCTGGG +
Preference number: 1 (lower is better)
Translates to: EVPSAMERVGLQSCD*QRPFLENCGEGGPG
Trigger: CCCAGGGCCTCCTTCCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCACAGCTCTGCAGCCCAACCCTCTCCATGGCCGATGGGACTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
3UTR-3UTR CCA 90 bp GGGTTGGGCTGCAGAGCTGTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGCTGCCACCCTCAGCCTaGCACTGTTGTGCCAGAGCC +
Preference number: 2 (lower is better)
Translates to: GLGCRAVIARGPSLRTVGLPPSA*HCCARA
Trigger: GGCTCTGGCACAACAGTGCCAGGCTGAGGGTGGCAG...CCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCACAGCTCTGCAGCCCAACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
3UTR CAA 90 bp TGGAGAGGGTTGGGCTGCAGAGCTGTGATTGCCAGAGGCCCTTCCTaGAGAACTGTGGGGAAGGAGGCCCTGGGGGTTTCTTCTGTAGGC +
Preference number: 2 (lower is better)
Translates to: WRGLGCRAVIARGPS*RTVGKEALGVSSVG
Trigger: GCCTACAGAAGAAACCCCCAGGGCCTCCTTCCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCACAGCTCTGCAGCCCAACCCTCTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325239.11
3UTR-3UTR GCA 90 bp TGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGGTTGGGCTGGGCCCCAGTCACCTCTaGCACCCTCAGCCTGGCACT +
Preference number: 2 (lower is better)
Translates to: CVLILFIEVPSAMERVGLGPSHL*HPQPGT
Trigger: AGTGCCAGGCTGAGGGTGGCAGAGGTGACTGGGGCC...CAGCCCAACCCTCTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325239.11
3UTR-3UTR TCA 90 bp AGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTTGGGCTGCAGAGCTGTaGTTGCCAGAGGCCCTTCCT +
Preference number: 2 (lower is better)
Translates to: SHSFQRAAQPSECVCSSFWAAEL*LPEALP
Trigger: AGGAAGGGCCTCTGGCAATCACAGCTCTGCAGCCCA...AAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
3UTR GCA 72 bp TCGGCCATGGAGAGGGTTGGGCTGCAGAGCTGTGATTaGCAGAGGCCCTTCCTTGAGAACTGTGGGGAAGGA +
Preference number: 3 (lower is better)
Translates to: SAMERVGLQSCD*QRPFLENCGEG
Trigger: TCCTTCCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCACAGCTCTGCAGCCCAACCCTCTCCATGGCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
3UTR-3UTR CAA 90 bp AGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCCTCAGCCTGGCACTGTaGTGCCAGAGCCTCTGCTGC +
Preference number: 3 (lower is better)
Translates to: SVLLSPPSVCAHPFHRSPLSLAL*CQSLCC
Trigger: GCAGCAGAGGCTCTGGCACAACAGTGCCAGGCTGAG...GGGACTTCTATGAAAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp CATCGGCCATGGAGAGGGTTGGGCTGCAGAGCTGTGATTGCCAGAGGCCCTTCCTGCTCTGCAGGGCCATaGGGGTGCAGGATGGCCCAG +
Preference number: 4 (lower is better)
Translates to: HRPWRGLGCRAVIARGPSCSAGP*GCRMAQ
Trigger: CTGGGCCATCCTGCACCCTCATGGCCCTGCAGAGCA...GGAAGGGCCTCTGGCAATCACAGCTCTGCAGCCCAACCCTCTCCATGGCCGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp CATCGGCCATGGAGAGGGTTGGGCTGCAGAGCTGTGATTGCCAGAGGCCCTTCCCCCCACCAGCGATGCTaGGGATGCTCTGCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: HRPWRGLGCRAVIARGPSPHQRC*GCSAGP
Trigger: TGGCCCTGCAGAGCATCCTCAGCATCGCTGGTGGGG...GGAAGGGCCTCTGGCAATCACAGCTCTGCAGCCCAACCCTCTCCATGGCCGATG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp CATCGGCCATGGAGAGGGTTGGGCTGCAGAGCTGTGATTGCCAGAGGCCCTTCCCCCGGAAGATGTCGGTaGAGAGGGGGTCCCCACCAG +
Preference number: 4 (lower is better)
Translates to: HRPWRGLGCRAVIARGPSPGRCR*RGGPHQ
Trigger: CTGGTGGGGACCCCCTCTTCACCGACATCTTCCGGG...GGAAGGGCCTCTGGCAATCACAGCTCTGCAGCCCAACCCTCTCCATGGCCGATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp GCTGTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGAAGGAGGCCCTGGGGCAGGCCCAGGAGCCCTaGGTCCCGGAAGATGTCGGT +
Preference number: 4 (lower is better)
Translates to: AVIARGPSLRTVGKEALGQAQEP*VPEDVG
Trigger: ACCGACATCTTCCGGGACTCAGGGCTCCTGGGCCTG...CCCCAGGGCCTCCTTCCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCACAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp GCTGTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGAAGGAGGCCCTGGGGTGCGGTGGACGAGGCTaGGGAACTGCAGCACGCTGG +
Preference number: 4 (lower is better)
Translates to: AVIARGPSLRTVGKEALGCGGRG*GTAARW
Trigger: CCAGCGTGCTGCAGTTCCTCAGCCTCGTCCACCGCA...CCCCAGGGCCTCCTTCCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCACAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp GTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGAAGGAGGCCCTGGGGGTTCTTGGGCTTGGAGGCTaGGCCGGGGGCTCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: VIARGPSLRTVGKEALGVLGLGG*AGGSSP
Trigger: AGGAGAGGAGCCCCCGGCTCAGCCTCCAAGCCCAAG...AACCCCCAGGGCCTCCTTCCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR GCA 90 bp GCTGTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGAAGGAGGCCCTGGGGCGGGGGCTCCTCTCCTaGTGGCCGTCCAGGAACAGA +
Preference number: 4 (lower is better)
Translates to: AVIARGPSLRTVGKEALGRGLLS*WPSRNR
Trigger: TCTGTTCCTGGACGGCCAGCAGGAGAGGAGCCCCCG...CCCCAGGGCCTCCTTCCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCACAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp GGGTTGGGCTGCAGAGCTGTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGGTGGCCTCTTGGGCTTaGAGGCTGAGCCGGGGGCTC +
Preference number: 4 (lower is better)
Translates to: GLGCRAVIARGPSLRTVGVASWA*RLSRGL
Trigger: GAGCCCCCGGCTCAGCCTCCAAGCCCAAGAGGCCAC...CCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCACAGCTCTGCAGCCCAACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp CATCGGCCATGGAGAGGGTTGGGCTGCAGAGCTGTGATTGCCAGAGGCCCTTCCCTGCAGCTCACTTCCTaGGAGGAGTCCCTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: HRPWRGLGCRAVIARGPSLQLTS*EESLQA
Trigger: GGCCTGGAGGGACTCCTCTCAGGAAGTGAGCTGCAG...GGAAGGGCCTCTGGCAATCACAGCTCTGCAGCCCAACCCTCTCCATGGCCGATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp GCTGTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGAAGGAGGCCCTGGGGTATCCGGGGTGGGAGTaGGCCGCTGGAGGAAAAGGC +
Preference number: 4 (lower is better)
Translates to: AVIARGPSLRTVGKEALGYPGWE*AAGGKG
Trigger: GCCTTTTCCTCCAGCGGCTCACTCCCACCCCGGATA...CCCCAGGGCCTCCTTCCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCACAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp GCTGTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGAAGGAGGCCCTGGGGGCAAGTCCTGGGTGCTaGAGTGGCCCCTCAGCTGAC +
Preference number: 4 (lower is better)
Translates to: AVIARGPSLRTVGKEALGASPGC*SGPSAD
Trigger: GTCAGCTGAGGGGCCACTTCAGCACCCAGGACTTGC...CCCCAGGGCCTCCTTCCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCACAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp GGGTTGGGCTGCAGAGCTGTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGGGCGGGTCACGTGGGTaGGGTGGTCCAGATCCCACA +
Preference number: 4 (lower is better)
Translates to: GLGCRAVIARGPSLRTVGGGSRG*GGPDPT
Trigger: TGTGGGATCTGGACCACCTCACCCACGTGACCCGCC...CCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCACAGCTCTGCAGCCCAACCC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR GCA 90 bp GCTGTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGAAGGAGGCCCTGGGGCTGTCTGGGGGATACTaGTCCCCATGCCTGCAGCGG +
Preference number: 4 (lower is better)
Translates to: AVIARGPSLRTVGKEALGLSGGY*SPCLQR
Trigger: CCGCTGCAGGCATGGGGAGCAGTATCCCCCAGACAG...CCCCAGGGCCTCCTTCCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCACAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR GCA 90 bp CATCGGCCATGGAGAGGGTTGGGCTGCAGAGCTGTGATTGCCAGAGGCCCTTCCGGAGACCCTCCACTGTaGTGTCGCCTTCAGCTGCGG +
Preference number: 4 (lower is better)
Translates to: HRPWRGLGCRAVIARGPSGDPPL*CRLQLR
Trigger: CCGCAGCTGAAGGCGACAGCACAGTGGAGGGTCTCC...GGAAGGGCCTCTGGCAATCACAGCTCTGCAGCCCAACCCTCTCCATGGCCGATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR GCA 90 bp GGGTTGGGCTGCAGAGCTGTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGTCAGGGTCCTTGGCCTaGCGCCCGGGCATCAGCTTC +
Preference number: 4 (lower is better)
Translates to: GLGCRAVIARGPSLRTVGSGSLA*RPGISF
Trigger: GAAGCTGATGCCCGGGCGGCAGGCCAAGGACCCTGA...CCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCACAGCTCTGCAGCCCAACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp CATCGGCCATGGAGAGGGTTGGGCTGCAGAGCTGTGATTGCCAGAGGCCCTTCCGTGGCAAAGCAGATCTaGAGGGGTGGCCGTCAGCGC +
Preference number: 4 (lower is better)
Translates to: HRPWRGLGCRAVIARGPSVAKQI*RGGRQR
Trigger: GCGCTGACGGCCACCCCTCCAGATCTGCTTTGCCAC...GGAAGGGCCTCTGGCAATCACAGCTCTGCAGCCCAACCCTCTCCATGGCCGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp GGGTTGGGCTGCAGAGCTGTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGTGCAGCGGGGGCTCCTaGAGGGAGCCTTCCAGGTCA +
Preference number: 4 (lower is better)
Translates to: GLGCRAVIARGPSLRTVGCSGGS*REPSRS
Trigger: TGACCTGGAAGGCTCCCTCCAGGAGCCCCCGCTGCA...CCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCACAGCTCTGCAGCCCAACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp GTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGAAGGAGGCCCTGGGGGTTGTGCTGGCATGCAGGTaGCCCTGCAGGAGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: VIARGPSLRTVGKEALGVVLACR*PCRSSR
Trigger: CCTGCTGCTCCTGCAGGGCCACCTGCATGCCAGCAC...AACCCCCAGGGCCTCCTTCCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp GCTGTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGAAGGAGGCCCTGGGGCCAGCACAGTGGTGCTaGCATGCAGGTGGCCCTGCA +
Preference number: 4 (lower is better)
Translates to: AVIARGPSLRTVGKEALGPAQWC*HAGGPA
Trigger: TGCAGGGCCACCTGCATGCCAGCACCACTGTGCTGG...CCCCAGGGCCTCCTTCCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCACAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp GCTGTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGAAGGAGGCCCTGGGGGAACCTGCCAGGGGCTaGCTCATGGTGGCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: AVIARGPSLRTVGKEALGEPARG*LMVAFS
Trigger: GCTGAAGGCCACCATGAGCCAGCCCCTGGCAGGTTC...CCCCAGGGCCTCCTTCCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCACAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp GCCCTCCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGCGGGGCTCGCCACGCTaGGTCCTGGGGGTAGGTGCG +
Preference number: 4 (lower is better)
Translates to: ALRVCVLILFIEVPSAMERGSPR*VLGVGA
Trigger: CGCACCTACCCCCAGGACCCAGCGTGGCGAGCCCCG...CTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACACACTCGGAGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp CATCGGCCATGGAGAGGGTTGGGCTGCAGAGCTGTGATTGCCAGAGGCCCTTCCGCCTTGGTGGGAGCCTaGAGACCCTCCACTGTGCTG +
Preference number: 4 (lower is better)
Translates to: HRPWRGLGCRAVIARGPSALVGA*RPSTVL
Trigger: CAGCACAGTGGAGGGTCTCCAGGCTCCCACCAAGGC...GGAAGGGCCTCTGGCAATCACAGCTCTGCAGCCCAACCCTCTCCATGGCCGATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp GCTGTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGAAGGAGGCCCTGGGGCGGGATGTGCCTTGGTaGGAGCCTGGAGACCCTCCA +
Preference number: 4 (lower is better)
Translates to: AVIARGPSLRTVGKEALGRDVPW*EPGDPP
Trigger: TGGAGGGTCTCCAGGCTCCCACCAAGGCACATCCCG...CCCCAGGGCCTCCTTCCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCACAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp GTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGAAGGAGGCCCTGGGGGTTGGGCGGGATGTGCCTTaGTGGGAGCCTGGAGACCCT +
Preference number: 4 (lower is better)
Translates to: VIARGPSLRTVGKEALGVGRDVP*WEPGDP
Trigger: AGGGTCTCCAGGCTCCCACCAAGGCACATCCCGCCC...AACCCCCAGGGCCTCCTTCCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp GCTGTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGAAGGAGGCCCTGGGGGCCACTGCTTGGGGCTaGAGGCTCCAAGCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: AVIARGPSLRTVGKEALGATAWG*RLQAGA
Trigger: AGCTCCTGCTTGGAGCCTCCAGCCCCAAGCAGTGGC...CCCCAGGGCCTCCTTCCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCACAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp CATCGGCCATGGAGAGGGTTGGGCTGCAGAGCTGTGATTGCCAGAGGCCCTTCCAAAAAGGGCTGTGGGTaGCCAGGCAGGCTCACGGGG +
Preference number: 4 (lower is better)
Translates to: HRPWRGLGCRAVIARGPSKKGCG*PGRLTG
Trigger: CCCCGTGAGCCTGCCTGGCCACCCACAGCCCTTTTT...GGAAGGGCCTCTGGCAATCACAGCTCTGCAGCCCAACCCTCTCCATGGCCGATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp GGGTTGGGCTGCAGAGCTGTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGGGCAGGCGGGTCACGTaGGTGAGGTGGTCCAGATCC +
Preference number: 4 (lower is better)
Translates to: GLGCRAVIARGPSLRTVGGRRVT*VRWSRS
Trigger: GGATCTGGACCACCTCACCCACGTGACCCGCCTGCC...CCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCACAGCTCTGCAGCCCAACCC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp CATCGGCCATGGAGAGGGTTGGGCTGCAGAGCTGTGATTGCCAGAGGCCCTTCCAGCCTGCTTCGCACATaGCCTGGCGGTTCTTCTCCG +
Preference number: 4 (lower is better)
Translates to: HRPWRGLGCRAVIARGPSSLLRT*PGGSSP
Trigger: CGGAGAAGAACCGCCAGGTCATGTGCGAAGCAGGCT...GGAAGGGCCTCTGGCAATCACAGCTCTGCAGCCCAACCCTCTCCATGGCCGATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp AGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTGCTGCGGGGCCTGTGTaGCTCCAGGGTGCAGCCCAG +
Preference number: 4 (lower is better)
Translates to: SHSFQRAAQPSECVCSSFAAGPV*LQGAAQ
Trigger: CTGGGCTGCACCCTGGAGTCACACAGGCCCCGCAGC...AAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp GTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGAAGGAGGCCCTGGGGGTTGGAGCTGGCCACACCTaGCCTGAAGCTGGCATCCTG +
Preference number: 4 (lower is better)
Translates to: VIARGPSLRTVGKEALGVGAGHT*PEAGIL
Trigger: CAGGATGCCAGCTTCAGGTCAGGTGTGGCCAGCTCC...AACCCCCAGGGCCTCCTTCCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp CATCGGCCATGGAGAGGGTTGGGCTGCAGAGCTGTGATTGCCAGAGGCCCTTCCAAGTGGCCCCTCAGCTaGCAGGCCAGGATGCCAATG +
Preference number: 4 (lower is better)
Translates to: HRPWRGLGCRAVIARGPSKWPLS*QARMPM
Trigger: CATTGGCATCCTGGCCTGTCAGCTGAGGGGCCACTT...GGAAGGGCCTCTGGCAATCACAGCTCTGCAGCCCAACCCTCTCCATGGCCGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp GTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGAAGGAGGCCCTGGGGGTTGAGGCTGAAGGTGACTaGCGCTGCCAGGCACGTGAC +
Preference number: 4 (lower is better)
Translates to: VIARGPSLRTVGKEALGVEAEGD*RCQARD
Trigger: GTCACGTGCCTGGCAGCGTCAGTCACCTTCAGCCTC...AACCCCCAGGGCCTCCTTCCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR GCA 90 bp CATCGGCCATGGAGAGGGTTGGGCTGCAGAGCTGTGATTGCCAGAGGCCCTTCCCAGAAGCAGCAGCTGTaGTCCCGAAGGCAGGTCGTG +
Preference number: 4 (lower is better)
Translates to: HRPWRGLGCRAVIARGPSQKQQL*SRRQVV
Trigger: CACGACCTGCCTTCGGGAGCACAGCTGCTGCTTCTG...GGAAGGGCCTCTGGCAATCACAGCTCTGCAGCCCAACCCTCTCCATGGCCGATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR GCA 90 bp GTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGAAGGAGGCCCTGGGGGTTGATTCCCCCAAGGGCTaGGGGGCCTGTGTGACTCCA +
Preference number: 4 (lower is better)
Translates to: VIARGPSLRTVGKEALGVDSPKG*GACVTP
Trigger: TGGAGTCACACAGGCCCCGCAGCCCTTGGGGGAATC...AACCCCCAGGGCCTCCTTCCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR GCA 90 bp GTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGAAGGAGGCCCTGGGGGTTGGCCGGGAAGGTCTGTaGCCAGGCACCATCCTCAGA +
Preference number: 4 (lower is better)
Translates to: VIARGPSLRTVGKEALGVGREGL*PGTILR
Trigger: TCTGAGGATGGTGCCTGGGCACAGACCTTCCCGGCC...AACCCCCAGGGCCTCCTTCCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR GCA 90 bp GTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGAAGGAGGCCCTGGGGGTTGCTGTCGCCTTCAGCTaGGGCCTCAGGACTGCTGGT +
Preference number: 4 (lower is better)
Translates to: VIARGPSLRTVGKEALGVAVAFS*GLRTAG
Trigger: ACCAGCAGTCCTGAGGCCGCAGCTGAAGGCGACAGC...AACCCCCAGGGCCTCCTTCCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR GCA 90 bp GCTGTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGAAGGAGGCCCTGGGGTCCTCCAGGGTCTGCTaGCTTTGTGCCACCAGCTGC +
Preference number: 4 (lower is better)
Translates to: AVIARGPSLRTVGKEALGSSRVC*LCATSC
Trigger: GCAGCTGGTGGCACAAAGGCAGCAGACCCTGGAGGA...CCCCAGGGCCTCCTTCCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCACAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR GCA 90 bp GTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGAAGGAGGCCCTGGGGGTTTCCAGGGCGATGTCCTaGAGGAGGAAGCGAGCCTGC +
Preference number: 4 (lower is better)
Translates to: VIARGPSLRTVGKEALGVSRAMS*RRKRAC
Trigger: GCAGGCTCGCTTCCTCCTGCAGGACATCGCCCTGGA...AACCCCCAGGGCCTCCTTCCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR GCA 90 bp GGGTTGGGCTGCAGAGCTGTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGGCCCAGGGAGGGAGCTaGACGTCTCCTAGCACAGTC +
Preference number: 4 (lower is better)
Translates to: GLGCRAVIARGPSLRTVGAQGGS*TSPSTV
Trigger: GACTGTGCTAGGAGACGTGCAGCTCCCTCCCTGGGC...CCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCACAGCTCTGCAGCCCAACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp CATCGGCCATGGAGAGGGTTGGGCTGCAGAGCTGTGATTGCCAGAGGCCCTTCCGGACTGCCCTCCATGTaGGACATCAGGCTGCACAGC +
Preference number: 4 (lower is better)
Translates to: HRPWRGLGCRAVIARGPSGLPSM*DIRLHS
Trigger: GCTGTGCAGCCTGATGTCCCACATGGAGGGCAGTCC...GGAAGGGCCTCTGGCAATCACAGCTCTGCAGCCCAACCCTCTCCATGGCCGATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp CATCGGCCATGGAGAGGGTTGGGCTGCAGAGCTGTGATTGCCAGAGGCCCTTCCGAAGTGTTCCTGCACTaGGGCCGGCTTCAGGGGCAT +
Preference number: 4 (lower is better)
Translates to: HRPWRGLGCRAVIARGPSEVFLH*GRLQGH
Trigger: ATGCCCCTGAAGCCGGCCCCAGTGCAGGAACACTTC...GGAAGGGCCTCTGGCAATCACAGCTCTGCAGCCCAACCCTCTCCATGGCCGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp GTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGAAGGAGGCCCTGGGGGTTCTGATGAGGCGTGAGTaGAGGGGGCTGCCACTGGTG +
Preference number: 4 (lower is better)
Translates to: VIARGPSLRTVGKEALGVLMRRE*RGLPLV
Trigger: CACCAGTGGCAGCCCCCTCCACTCACGCCTCATCAG...AACCCCCAGGGCCTCCTTCCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp GGGTTGGGCTGCAGAGCTGTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGGGGAAGAAGGTCAGCTaGGTGCAGTCCACCCCCACC +
Preference number: 4 (lower is better)
Translates to: GLGCRAVIARGPSLRTVGGKKVS*VQSTPT
Trigger: GGTGGGGGTGGACTGCACCCAGCTGACCTTCTTCCC...CCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCACAGCTCTGCAGCCCAACCC
62% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp GTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGAAGGAGGCCCTGGGGGTTAGAGCGCAGAAGGCCTaGGTGAAGGGTGGCATCCGG +
Preference number: 4 (lower is better)
Translates to: VIARGPSLRTVGKEALGVRAQKA*VKGGIR
Trigger: CCGGATGCCACCCTTCACCCAGGCCTTCTGCGCTCT...AACCCCCAGGGCCTCCTTCCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp CATCGGCCATGGAGAGGGTTGGGCTGCAGAGCTGTGATTGCCAGAGGCCCTTCCGGCCAATGGCCCCTTTaGGGGACTCTGAGCCTAGAG +
Preference number: 4 (lower is better)
Translates to: HRPWRGLGCRAVIARGPSGQWPL*GTLSLE
Trigger: CTCTAGGCTCAGAGTCCCCCAAAGGGGCCATTGGCC...GGAAGGGCCTCTGGCAATCACAGCTCTGCAGCCCAACCCTCTCCATGGCCGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp GCTGTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGAAGGAGGCCCTGGGGCCGAGTCTGTCCCCGTaGGCACGTACACTGACTTCA +
Preference number: 4 (lower is better)
Translates to: AVIARGPSLRTVGKEALGPSLSP*ARTLTS
Trigger: TGAAGTCAGTGTACGTGCTCACGGGGACAGACTCGG...CCCCAGGGCCTCCTTCCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp GTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGAAGGAGGCCCTGGGGGTTCAGGGAGAGTGTCCGTaGGCCTGGAGAGGTTCTGGA +
Preference number: 4 (lower is better)
Translates to: VIARGPSLRTVGKEALGVQGECP*AWRGSG
Trigger: TCCAGAACCTCTCCAGGCTCACGGACACTCTCCCTG...AACCCCCAGGGCCTCCTTCCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp GTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGAAGGAGGCCCTGGGGGTTGGTCCGCAGAGACCCTaGCAGGTGGCCAGCACAATT +
Preference number: 4 (lower is better)
Translates to: VIARGPSLRTVGKEALGVGPQRP*QVASTI
Trigger: AATTGTGCTGGCCACCTGTCAGGGTCTCTGCGGACC...AACCCCCAGGGCCTCCTTCCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp AAGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTCTTGGGCTTGGAGGCTaGGCCGGGGGCTCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: KSQFPACCSALRVCVLILLGLGG*AGGSSP
Trigger: AGGAGAGGAGCCCCCGGCTCAGCCTCCAAGCCCAAG...AAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000490507.1
CDS-3UTR TCA 90 bp GTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGAAGGAGGCCCTGGGGGTTTGGGCTGCAGAGCTGTaGTTGCCAGAGGCCCTTCCT +
Preference number: 4 (lower is better)
Translates to: VIARGPSLRTVGKEALGVWAAEL*LPEALP
Trigger: AGGAAGGGCCTCTGGCAATCACAGCTCTGCAGCCCA...AACCCCCAGGGCCTCCTTCCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR GCA 90 bp CATCGGCCATGGAGAGGGTTGGGCTGCAGAGCTGTGATTGCCAGAGGCCCTTCCTGGAAGAAGTGTTCCTaGACTGGGGCCGGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: HRPWRGLGCRAVIARGPSWKKCS*TGAGFR
Trigger: CCTGAAGCCGGCCCCAGTGCAGGAACACTTCTTCCA...GGAAGGGCCTCTGGCAATCACAGCTCTGCAGCCCAACCCTCTCCATGGCCGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR GCA 90 bp GCCCTCCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGACTGCTCCCCATGCCTaGAGCGGGGGCTCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: ALRVCVLILFIEVPSAMETAPHA*SGGSWR
Trigger: CCTCCAGGAGCCCCCGCTGCAGGCATGGGGAGCAGT...CTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACACACTCGGAGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR GCA 90 bp GGGTTGGGCTGCAGAGCTGTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGGGTCCCAAGCAAGCCTaGTTCGCACATGACCTGGCG +
Preference number: 4 (lower is better)
Translates to: GLGCRAVIARGPSLRTVGGPKQA*FAHDLA
Trigger: CGCCAGGTCATGTGCGAAGCAGGCTTGCTTGGGACC...CCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCACAGCTCTGCAGCCCAACCC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR GCA 90 bp GGGTTGGGCTGCAGAGCTGTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGGCGGAGGGAGGGGCTTaGCAGAAAGTACAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: GLGCRAVIARGPSLRTVGAEGGA*QKVQQQ
Trigger: CTGCTGCTGTACTTTCTGGCAAGCCCCTCCCTCCGC...CCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCACAGCTCTGCAGCCCAACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR GCA 90 bp GCTGTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGAAGGAGGCCCTGGGGACCATCCTCAGAACCTaGCAGGGGCTGGCTCATGGT +
Preference number: 4 (lower is better)
Translates to: AVIARGPSLRTVGKEALGTILRT*QGLAHG
Trigger: ACCATGAGCCAGCCCCTGGCAGGTTCTGAGGATGGT...CCCCAGGGCCTCCTTCCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR GCA 90 bp GTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGAAGGAGGCCCTGGGGGTTGGTCTGCTGCCTTTGTaGCACCAGCTGCTGCCAGAG +
Preference number: 4 (lower is better)
Translates to: VIARGPSLRTVGKEALGVGLLPL*HQLLPE
Trigger: CTCTGGCAGCAGCTGGTGGCACAAAGGCAGCAGACC...AACCCCCAGGGCCTCCTTCCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR GCA 90 bp CATCGGCCATGGAGAGGGTTGGGCTGCAGAGCTGTGATTGCCAGAGGCCCTTCCGACACCAGGTGGCCCTaGACAATCACCAGGGAGAAC +
Preference number: 4 (lower is better)
Translates to: HRPWRGLGCRAVIARGPSDTRWP*TITREN
Trigger: GTTCTCCCTGGTGATTGTGCAGGGCCACCTGGTGTC...GGAAGGGCCTCTGGCAATCACAGCTCTGCAGCCCAACCCTCTCCATGGCCGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp CATCGGCCATGGAGAGGGTTGGGCTGCAGAGCTGTGATTGCCAGAGGCCCTTCCTCTGCCTCCATGCCGTaGCAAAGCAGATCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: HRPWRGLGCRAVIARGPSSASMP*QSRSGG
Trigger: CCCTCCAGATCTGCTTTGCCACGGCATGGAGGCAGA...GGAAGGGCCTCTGGCAATCACAGCTCTGCAGCCCAACCCTCTCCATGGCCGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp GCTGTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGAAGGAGGCCCTGGGGCCCGAAGGCAGGTCGTaGCAATCAGCAGAGACTGCA +
Preference number: 4 (lower is better)
Translates to: AVIARGPSLRTVGKEALGPEGRS*QSAETA
Trigger: TGCAGTCTCTGCTGATTGCCACGACCTGCCTTCGGG...CCCCAGGGCCTCCTTCCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp CATCGGCCATGGAGAGGGTTGGGCTGCAGAGCTGTGATTGCCAGAGGCCCTTCCGGGTCCACTTCGCTCTaGGTCAGCCCATCATACCGA +
Preference number: 4 (lower is better)
Translates to: HRPWRGLGCRAVIARGPSGSTSL*VSPSYR
Trigger: TCGGTATGATGGGCTGACCCAGAGCGAAGTGGACCC...GGAAGGGCCTCTGGCAATCACAGCTCTGCAGCCCAACCCTCTCCATGGCCGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp GGGTTGGGCTGCAGAGCTGTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGAGTGGAGGGTGCCGCTaGCCATGCTGTCCAGAAAGC +
Preference number: 4 (lower is better)
Translates to: GLGCRAVIARGPSLRTVGSGGCR*PCCPES
Trigger: GCTTTCTGGACAGCATGGCCAGCGGCACCCTCCACT...CCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCACAGCTCTGCAGCCCAACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp CATCGGCCATGGAGAGGGTTGGGCTGCAGAGCTGTGATTGCCAGAGGCCCTTCCGAGGAGGGAACGGTCTaGTGGCACCTGTCCCAATTC +
Preference number: 4 (lower is better)
Translates to: HRPWRGLGCRAVIARGPSEEGTV*WHLSQF
Trigger: GAATTGGGACAGGTGCCACCAGACCGTTCCCTCCTC...GGAAGGGCCTCTGGCAATCACAGCTCTGCAGCCCAACCCTCTCCATGGCCGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp GCTGTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGAAGGAGGCCCTGGGGATCCTGAGCAAGTCCTaGGTGCTGAAGTGGCCCCTC +
Preference number: 4 (lower is better)
Translates to: AVIARGPSLRTVGKEALGILSKS*VLKWPL
Trigger: GAGGGGCCACTTCAGCACCCAGGACTTGCTCAGGAT...CCCCAGGGCCTCCTTCCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp GTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGAAGGAGGCCCTGGGGGTTTGTTGGCTGGTGGCGTaGTCTGGAGAAGCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: VIARGPSLRTVGKEALGVCWLVA*SGEASR
Trigger: CCTGGAGGCTTCTCCAGACCACGCCACCAGCCAACA...AACCCCCAGGGCCTCCTTCCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp CATCGGCCATGGAGAGGGTTGGGCTGCAGAGCTGTGATTGCCAGAGGCCCTTCCGCTTCTGTTGGCTGGTaGCGTGGTCTGGAGAAGCCT +
Preference number: 4 (lower is better)
Translates to: HRPWRGLGCRAVIARGPSASVGW*RGLEKP
Trigger: AGGCTTCTCCAGACCACGCCACCAGCCAACAGAAGC...GGAAGGGCCTCTGGCAATCACAGCTCTGCAGCCCAACCCTCTCCATGGCCGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp CATCGGCCATGGAGAGGGTTGGGCTGCAGAGCTGTGATTGCCAGAGGCCCTTCCGTAGAAAAAGGGCTGTaGGTGGCCAGGCAGGCTCAC +
Preference number: 4 (lower is better)
Translates to: HRPWRGLGCRAVIARGPSVEKGL*VARQAH
Trigger: GTGAGCCTGCCTGGCCACCCACAGCCCTTTTTCTAC...GGAAGGGCCTCTGGCAATCACAGCTCTGCAGCCCAACCCTCTCCATGGCCGATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp GCCCTCCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGGAGATGCCTTCCCGATaGGCGGGCAGGCGGGTCACG +
Preference number: 4 (lower is better)
Translates to: ALRVCVLILFIEVPSAMEEMPSR*AGRRVT
Trigger: CGTGACCCGCCTGCCCGCCCATCGGGAAGGCATCTC...CTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACACACTCGGAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp GCTGTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGAAGGAGGCCCTGGGGGGTTATGGCTCCTTCTaGGCCCCAGGCTGTGGTGAT +
Preference number: 4 (lower is better)
Translates to: AVIARGPSLRTVGKEALGGYGSF*APGCGD
Trigger: ATCACCACAGCCTGGGGCCCAGAAGGAGCCATAACC...CCCCAGGGCCTCCTTCCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCACAGC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp AGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTGTGGCCTCTTGGGCTTaGAGGCTGAGCCGGGGGCTC +
Preference number: 4 (lower is better)
Translates to: SHSFQRAAQPSECVCSSFVASWA*RLSRGL
Trigger: GAGCCCCCGGCTCAGCCTCCAAGCCCAAGAGGCCAC...AAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000490507.1
CDS-3UTR TCA 90 bp GGGTTGGGCTGCAGAGCTGTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGGACTGGGAAAGCAGATaGTCCCCACGGAGTGTTCCC +
Preference number: 4 (lower is better)
Translates to: GLGCRAVIARGPSLRTVGDWESR*SPRSVP
Trigger: GGGAACACTCCGTGGGGATCATCTGCTTTCCCAGTC...CCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCACAGCTCTGCAGCCCAACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp GCTGTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGAAGGAGGCCCTGGGGGCCCAGGGCTCTCCTTaGTCAGATGCTGTACCTTTC +
Preference number: 4 (lower is better)
Translates to: AVIARGPSLRTVGKEALGAQGSP*SDAVPF
Trigger: GAAAGGTACAGCATCTGATCAAGGAGAGCCCTGGGC...CCCCAGGGCCTCCTTCCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCACAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp AGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCGCTGCTCCAAGATGCTaGGCGAGGCCTCCCGGTAGC +
Preference number: 4 (lower is better)
Translates to: SVLLSPPSVCAHPFHRSPAAPRC*ARPPGS
Trigger: GCTACCGGGAGGCCTCGCTCAGCATCTTGGAGCAGC...GGGACTTCTATGAAAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp GTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGAAGGAGGCCCTGGGGGTTCTCGGCGTTGATGGCTaGGAGCTGCTCCAAGATGCT +
Preference number: 4 (lower is better)
Translates to: VIARGPSLRTVGKEALGVLGVDG*ELLQDA
Trigger: AGCATCTTGGAGCAGCTCTCAGCCATCAACGCCGAG...AACCCCCAGGGCCTCCTTCCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp GTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGAAGGAGGCCCTGGGGGTTTGTACTCCTCGGCGTTaGTGGCTGAGAGCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: VIARGPSLRTVGKEALGVCTPRR*WLRAAP
Trigger: TGGAGCAGCTCTCAGCCATCAACGCCGAGGAGTACA...AACCCCCAGGGCCTCCTTCCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp GGGTTGGGCTGCAGAGCTGTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGCGACCCCGGGATGCATaGTTGCAGCATCTCCCTCAT +
Preference number: 4 (lower is better)
Translates to: GLGCRAVIARGPSLRTVGRPRDA*LQHLPH
Trigger: ATGAGGGAGATGCTGCAATCATGCATCCCGGGGTCG...CCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCACAGCTCTGCAGCCCAACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp GCTGTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGAAGGAGGCCCTGGGGTCTTGGCAGAGCCAATaGCCTGTCCATCCAGACAGG +
Preference number: 4 (lower is better)
Translates to: AVIARGPSLRTVGKEALGSWQSQ*PVHPDR
Trigger: CCTGTCTGGATGGACAGGTCATTGGCTCTGCCAAGA...CCCCAGGGCCTCCTTCCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp AAGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTGGCAGGCCCGCCAATaGAGTCCAGGCTGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: KSQFPACCSALRVCVLILWQARQ*SPGCWQ
Trigger: CTGCCAGCAGCCTGGACTTCATTGGCGGGCCTGCCA...AAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp GCTGTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGAAGGAGGCCCTGGGGTTGCTCAGGCAGTGGTaGCTGGCTCTTCAGGTTGTC +
Preference number: 4 (lower is better)
Translates to: AVIARGPSLRTVGKEALGLLRQW*LALQVV
Trigger: GACAACCTGAAGAGCCAGTCACCACTGCCTGAGCAA...CCCCAGGGCCTCCTTCCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp CATCGGCCATGGAGAGGGTTGGGCTGCAGAGCTGTGATTGCCAGAGGCCCTTCCCCTGTCCAAAGTTGCTaGCAAACCCCAGGATGGTGC +
Preference number: 4 (lower is better)
Translates to: HRPWRGLGCRAVIARGPSPVQSC*QTPGWC
Trigger: GCACCATCCTGGGGTTTGTCAGCAACTTTGGACAGG...GGAAGGGCCTCTGGCAATCACAGCTCTGCAGCCCAACCCTCTCCATGGCCGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp GTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGAAGGAGGCCCTGGGGGTTTCCCCAAGCAGCAGCTaGAGTCATCAAAGCCCCAGC +
Preference number: 4 (lower is better)
Translates to: VIARGPSLRTVGKEALGVSPSSS*SHQSPS
Trigger: GCTGGGGCTTTGATGACTTCAGCTGCTGCTTGGGGA...AACCCCCAGGGCCTCCTTCCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR GCA 90 bp GTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGAAGGAGGCCCTGGGGGTTCACACGACCCCGGGATaGATGATTGCAGCATCTCCC +
Preference number: 4 (lower is better)
Translates to: VIARGPSLRTVGKEALGVHTTPG*MIAASP
Trigger: GGGAGATGCTGCAATCATGCATCCCGGGGTCGTGTG...AACCCCCAGGGCCTCCTTCCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR GCA 90 bp TGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGGTTGGGCTGCCTCCGGGCGGGATGTaGCTTGGTGGGAGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: CVLILFIEVPSAMERVGLPPGGM*LGGSLE
Trigger: CTCCAGGCTCCCACCAAGGCACATCCCGCCCGGAGG...CAGCCCAACCCTCTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR GCA 90 bp GCTGTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGAAGGAGGCCCTGGGGAGGCCGACTCCCACGTaGTCTTCACACTGTGGAACA +
Preference number: 4 (lower is better)
Translates to: AVIARGPSLRTVGKEALGRPTPT*SSHCGT
Trigger: TGTTCCACAGTGTGAAGAGCACGTGGGAGTCGGCCT...CCCCAGGGCCTCCTTCCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR GCA 90 bp GTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGAAGGAGGCCCTGGGGGTTAGCACAGTCCCGTCCTaGATGCAGCCGAACTCTACC +
Preference number: 4 (lower is better)
Translates to: VIARGPSLRTVGKEALGVSTVPS*MQPNST
Trigger: GGTAGAGTTCGGCTGCATGCAGGACGGGACTGTGCT...AACCCCCAGGGCCTCCTTCCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR GCA 90 bp CATCGGCCATGGAGAGGGTTGGGCTGCAGAGCTGTGATTGCCAGAGGCCCTTCCCCACAGGGACAAGTGTaGTCCCGCACAGGAGACAAT +
Preference number: 4 (lower is better)
Translates to: HRPWRGLGCRAVIARGPSPQGQV*SRTGDN
Trigger: ATTGTCTCCTGTGCGGGAGCACACTTGTCCCTGTGG...GGAAGGGCCTCTGGCAATCACAGCTCTGCAGCCCAACCCTCTCCATGGCCGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR GCA 90 bp GCCCTCCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGGGCCCCAGTCACCTCTaGCACCCTCAGCCTGGCACT +
Preference number: 4 (lower is better)
Translates to: ALRVCVLILFIEVPSAMEGPSHL*HPQPGT
Trigger: AGTGCCAGGCTGAGGGTGGCAGAGGTGACTGGGGCC...CTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACACACTCGGAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp GGGTTGGGCTGCAGAGCTGTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGGCCTTCTGGAGTTGCTaGGCAAGCTGGTCAGACACG +
Preference number: 4 (lower is better)
Translates to: GLGCRAVIARGPSLRTVGAFWSC*ASWSDT
Trigger: CGTGTCTGACCAGCTTGCCCAGCAACTCCAGAAGGC...CCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCACAGCTCTGCAGCCCAACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp GCTGTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGAAGGAGGCCCTGGGGGCAGCTCCCCTTGAGTaGATGAGCATAGAGCACCCA +
Preference number: 4 (lower is better)
Translates to: AVIARGPSLRTVGKEALGAAPLE*MSIEHP
Trigger: TGGGTGCTCTATGCTCATCCACTCAAGGGGAGCTGC...CCCCAGGGCCTCCTTCCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCACAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp GTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGAAGGAGGCCCTGGGGGTTCTGGCCAGGGAGCACTaGATCTCCTCGGAAAGCTGT +
Preference number: 4 (lower is better)
Translates to: VIARGPSLRTVGKEALGVLAREH*ISSESC
Trigger: ACAGCTTTCCGAGGAGATCCAGTGCTCCCTGGCCAG...AACCCCCAGGGCCTCCTTCCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp GTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGAAGGAGGCCCTGGGGGTTCAAGGAGAGGTCGTCTaGGCAGAGGCTGACGGAGAA +
Preference number: 4 (lower is better)
Translates to: VIARGPSLRTVGKEALGVQGEVV*AEADGE
Trigger: TTCTCCGTCAGCCTCTGCCCAGACGACCTCTCCTTG...AACCCCCAGGGCCTCCTTCCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp GCCCTCCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGGGGGCAGCCACTGCTTaGGGCTGGAGGCTCCAAGCA +
Preference number: 4 (lower is better)
Translates to: ALRVCVLILFIEVPSAMEGAATA*GWRLQA
Trigger: TGCTTGGAGCCTCCAGCCCCAAGCAGTGGCTGCCCC...CTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACACACTCGGAGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp GGGTTGGGCTGCAGAGCTGTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGCTCGCTTCTGTTGGCTaGTGGCGTGGTCTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: GLGCRAVIARGPSLRTVGLASVG*WRGLEK
Trigger: CTTCTCCAGACCACGCCACCAGCCAACAGAAGCGAG...CCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCACAGCTCTGCAGCCCAACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp AGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCGCTGCTCCTGGATCCTaGCCCAGGCGTTGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: SVLLSPPSVCAHPFHRSPAAPGS*PRRWLP
Trigger: AGGCAGCCAACGCCTGGGCCAGGATCCAGGAGCAGC...GGGACTTCTATGAAAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp GGGTTGGGCTGCAGAGCTGTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGCCAAAAAGCTGCTCCTaGATCCTGGCCCAGGCGTTG +
Preference number: 4 (lower is better)
Translates to: GLGCRAVIARGPSLRTVGPKSCS*ILAQAL
Trigger: CAACGCCTGGGCCAGGATCCAGGAGCAGCTTTTTGG...CCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCACAGCTCTGCAGCCCAACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp GCTGTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGAAGGAGGCCCTGGGGTGGTCTGAGCCCCCATaGGCTTTGAAAGATCCCGGA +
Preference number: 4 (lower is better)
Translates to: AVIARGPSLRTVGKEALGWSEPP*ALKDPG
Trigger: TCCGGGATCTTTCAAAGCCCATGGGGGCTCAGACCA...CCCCAGGGCCTCCTTCCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCACAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp CATCGGCCATGGAGAGGGTTGGGCTGCAGAGCTGTGATTGCCAGAGGCCCTTCCCAGGTAGAAGAACTCTaGGGTCAGCTCCCTGACGTC +
Preference number: 4 (lower is better)
Translates to: HRPWRGLGCRAVIARGPSQVEEL*GQLPDV
Trigger: GACGTCAGGGAGCTGACCCCAGAGTTCTTCTACCTG...GGAAGGGCCTCTGGCAATCACAGCTCTGCAGCCCAACCCTCTCCATGGCCGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp CATCGGCCATGGAGAGGGTTGGGCTGCAGAGCTGTGATTGCCAGAGGCCCTTCCAATCGTTGTTGGGGATaGGCACACGGCGCACAGACA +
Preference number: 4 (lower is better)
Translates to: HRPWRGLGCRAVIARGPSNRCWG*AHGAQT
Trigger: TGTCTGTGCGCCGTGTGCCCATCCCCAACAACGATT...GGAAGGGCCTCTGGCAATCACAGCTCTGCAGCCCAACCCTCTCCATGGCCGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp GCTGTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGAAGGAGGCCCTGGGGCCGGTGATGATGATCTaGCTTGTGTCCCATGCTGGG +
Preference number: 4 (lower is better)
Translates to: AVIARGPSLRTVGKEALGPVMMI*LVSHAG
Trigger: CCCAGCATGGGACACAAGCCAGATCATCATCACCGG...CCCCAGGGCCTCCTTCCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325239.11
3UTR CAA 72 bp TTGGGCTGCAGAGCTGTGATTGCCAGAGGCCCTTCCTaGAGAACTGTGGGGAAGGAGGCCCTGGGGGTTTCT +
Preference number: 4 (lower is better)
Translates to: LGCRAVIARGPS*RTVGKEALGVS
Trigger: AGAAACCCCCAGGGCCTCCTTCCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCACAGCTCTGCAGCCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp CAGCACCTGACGCTACCTAATACAGGGTACTGCCTGCCACATACAGTGGCTAACCCCCACCAGCGATGCTaGGGATGCTCTGCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: QHLTLPNTGYCLPHTVANPHQRC*GCSAGP
Trigger: TGGCCCTGCAGAGCATCCTCAGCATCGCTGGTGGGG...GTTAGCCACTGTATGTGGCAGGCAGTACCCTGTATTAGGTAGCGTCAGGTGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360890.6
CDS-3UTR TCA 90 bp CAGCACCTGACGCTACCTAATACAGGGTACTGCCTGCCACATACAGTGGCTAACCCCGGAAGATGTCGGTaGAGAGGGGGTCCCCACCAG +
Preference number: 4 (lower is better)
Translates to: QHLTLPNTGYCLPHTVANPGRCR*RGGPHQ
Trigger: CTGGTGGGGACCCCCTCTTCACCGACATCTTCCGGG...GTTAGCCACTGTATGTGGCAGGCAGTACCCTGTATTAGGTAGCGTCAGGTGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000360890.6
CDS-3UTR TCA 90 bp CAGCACCTGACGCTACCTAATACAGGGTACTGCCTGCCACATACAGTGGCTAACCAGGCCCAGGAGCCCTaGGTCCCGGAAGATGTCGGT +
Preference number: 4 (lower is better)
Translates to: QHLTLPNTGYCLPHTVANQAQEP*VPEDVG
Trigger: ACCGACATCTTCCGGGACTCAGGGCTCCTGGGCCTG...GTTAGCCACTGTATGTGGCAGGCAGTACCCTGTATTAGGTAGCGTCAGGTGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360890.6
CDS-3UTR TCA 90 bp AGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCGCAGCAGCCTCACCATaGTGCACACGACCCCGGGAT +
Preference number: 4 (lower is better)
Translates to: SVLLSPPSVCAHPFHRSPAAASP*CTRPRD
Trigger: ATCCCGGGGTCGTGTGCATCATGGTGAGGCTGCTGC...GGGACTTCTATGAAAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp GTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGAAGGAGGCCCTGGGGGTTACCCTCACCCCTAATTaGCCCACAGCAACAGCTCCA +
Preference number: 4 (lower is better)
Translates to: VIARGPSLRTVGKEALGVTLTPN*PTATAP
Trigger: TGGAGCTGTTGCTGTGGGTCAATTAGGGGTGAGGGT...AACCCCCAGGGCCTCCTTCCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp GTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGAAGGAGGCCCTGGGGGTTGCTCTTTGCCGTCTCTaGACATCGCTGCATCACCTC +
Preference number: 4 (lower is better)
Translates to: VIARGPSLRTVGKEALGVALCRL*TSLHHL
Trigger: GAGGTGATGCAGCGATGTTCAGAGACGGCAAAGAGC...AACCCCCAGGGCCTCCTTCCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp CATCGGCCATGGAGAGGGTTGGGCTGCAGAGCTGTGATTGCCAGAGGCCCTTCCCCTCCCAGAGCGGTGTaGCCTCTTCAATCTTCACTT +
Preference number: 4 (lower is better)
Translates to: HRPWRGLGCRAVIARGPSPPRAV*PLQSSL
Trigger: AAGTGAAGATTGAAGAGGTCACACCGCTCTGGGAGG...GGAAGGGCCTCTGGCAATCACAGCTCTGCAGCCCAACCCTCTCCATGGCCGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp GTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGAAGGAGGCCCTGGGGGTTTGCTGGTCCCAGAGGTaGCAATCGTTGTTGGGGATG +
Preference number: 4 (lower is better)
Translates to: VIARGPSLRTVGKEALGVCWSQR*QSLLGM
Trigger: CATCCCCAACAACGATTGTCACCTCTGGGACCAGCA...AACCCCCAGGGCCTCCTTCCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR GCA 90 bp TGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGGTTGGGCTGGGATACTGCTCCCCATaGCTGCAGCGGGGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: CVLILFIEVPSAMERVGLGYCSP*LQRGLL
Trigger: CAGGAGCCCCCGCTGCAGGCATGGGGAGCAGTATCC...CAGCCCAACCCTCTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR GCA 90 bp AGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCCACGCAAGTGGAGGGTaGCGCTGGCCATGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: SVLLSPPSVCAHPFHRSPHASGG*RWPCCP
Trigger: TGGACAGCATGGCCAGCGGCACCCTCCACTTGCGTG...GGGACTTCTATGAAAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR GCA 90 bp GTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGAAGGAGGCCCTGGGGGTTCTGAAGCTGGCATCCTaGAGAAGGCTCGGAGTCATC +
Preference number: 4 (lower is better)
Translates to: VIARGPSLRTVGKEALGVLKLAS*RRLGVI
Trigger: GATGACTCCGAGCCTTCTGCAGGATGCCAGCTTCAG...AACCCCCAGGGCCTCCTTCCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR GCA 90 bp AGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTACAGTGGTGCTGGCATaGAGGTGGCCCTGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: SHSFQRAAQPSECVCSSFTVVLA*RWPCRS
Trigger: GCTCCTGCAGGGCCACCTGCATGCCAGCACCACTGT...AAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR GCA 90 bp AGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTCCACGCCCTCAGTGCTaGGTTCCACCCAGGATCCTG +
Preference number: 4 (lower is better)
Translates to: SHSFQRAAQPSECVCSSFPRPQC*VPPRIL
Trigger: CAGGATCCTGGGTGGAACGCAGCACTGAGGGCGTGG...AAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR GCA 90 bp GCCCTCCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGCTGCGGCCTCAGGACTaGTGGTGTTCCGGGTGGACT +
Preference number: 4 (lower is better)
Translates to: ALRVCVLILFIEVPSAMELRPQD*WCSGWT
Trigger: AGTCCACCCGGAACACCAGCAGTCCTGAGGCCGCAG...CTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACACACTCGGAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR GCA 90 bp AAGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTGGCCAGAGCAGTCACTaGGGGGCTGGTTTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: KSQFPACCSALRVCVLILGQSSH*GAGFAG
Trigger: CCCAGCAAAACCAGCCCCGCAGTGACTGCTCTGGCC...AAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000490507.1
CDS-3UTR CCA 90 bp GGGTTGGGCTGCAGAGCTGTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGAAGGGCACCATGCCGTaGTCCTTCAGGACAACTGCA +
Preference number: 4 (lower is better)
Translates to: GLGCRAVIARGPSLRTVGKGTMP*SFRTTA
Trigger: TGCAGTTGTCCTGAAGGACCACGGCATGGTGCCCTT...CCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCACAGCTCTGCAGCCCAACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp GCCCTCCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGCAGCACGACCCTTaGGGGTCACCAGGATCCGGA +
Preference number: 4 (lower is better)
Translates to: ALRVCVLILFIEVPSAMERQHDP*GSPGSG
Trigger: TCCGGATCCTGGTGACCCCCAAGGGTCGTGCTGCCT...CTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACACACTCGGAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp GTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGAAGGAGGCCCTGGGGGTTGCTTCGCACATGACCTaGCGGTTCTTCTCCGACTTC +
Preference number: 4 (lower is better)
Translates to: VIARGPSLRTVGKEALGVASHMT*RFFSDF
Trigger: GAAGTCGGAGAAGAACCGCCAGGTCATGTGCGAAGC...AACCCCCAGGGCCTCCTTCCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp TGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGGTTGGGCTGAGGAAGCGCAGCGGGTaGCCCTCAGTGGCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: CVLILFIEVPSAMERVGLRKRSG*PSVAAP
Trigger: TGGAGCTGCCACTGAGGGCCACCCGCTGCGCTTCCT...CAGCCCAACCCTCTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp AGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCAGGGTTGCTCAGTCCTaGCCAGGTGGCGCACCAACG +
Preference number: 4 (lower is better)
Translates to: SVLLSPPSVCAHPFHRSPRVAQS*PGGAPT
Trigger: CGTTGGTGCGCCACCTGGCCAGGACTGAGCAACCCT...GGGACTTCTATGAAAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp GGGTTGGGCTGCAGAGCTGTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGGATGAGGTAGACCTCTaGAATGTGGACGTGGTGGGC +
Preference number: 4 (lower is better)
Translates to: GLGCRAVIARGPSLRTVGDEVDL*NVDVVG
Trigger: GCCCACCACGTCCACATTCCAGAGGTCTACCTCATC...CCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCACAGCTCTGCAGCCCAACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp TGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGGTTGGGCTGGGAACTGCAGCACGCTaGCCGGGAAGGTCTGTGCCC +
Preference number: 4 (lower is better)
Translates to: CVLILFIEVPSAMERVGLGTAAR*PGRSVP
Trigger: GGGCACAGACCTTCCCGGCCAGCGTGCTGCAGTTCC...CAGCCCAACCCTCTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp AGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTGCTATGGCCAAGGTCTaGAGGAACTCCGGGGCTCGC +
Preference number: 4 (lower is better)
Translates to: SHSFQRAAQPSECVCSSFAMAKV*RNSGAR
Trigger: GCGAGCCCCGGAGTTCCTCCAGACCTTGGCCATAGC...AAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp AGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTTGCTGGTGTTCCGGGTaGACTCAGCCCCAACCCCCT +
Preference number: 4 (lower is better)
Translates to: SHSFQRAAQPSECVCSSFCWCSG*TQPQPP
Trigger: AGGGGGTTGGGGCTGAGTCCACCCGGAACACCAGCA...AAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp GTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGAAGGAGGCCCTGGGGGTTAGCAGCTTCTGCACTTaGCTGAGGCTCTTTGCCGTC +
Preference number: 4 (lower is better)
Translates to: VIARGPSLRTVGKEALGVSSFCT*LRLFAV
Trigger: GACGGCAAAGAGCCTCAGCCAAGTGCAGAAGCTGCT...AACCCCCAGGGCCTCCTTCCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp TGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGGTTGGGCTGTGCACTCAGGGTCCTTaGCCTGCCGCCCGGGCATCA +
Preference number: 4 (lower is better)
Translates to: CVLILFIEVPSAMERVGLCTQGP*PAARAS
Trigger: TGATGCCCGGGCGGCAGGCCAAGGACCCTGAGTGCA...CAGCCCAACCCTCTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp AGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTGGGTGTCCTCCGAGGTaGCTTTCCCCTTCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: SHSFQRAAQPSECVCSSFGCPPR*LSPSGW
Trigger: CCAGCCTGAAGGGGAAAGCCACCTCGGAGGACACCC...AAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp AAGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTAGCATCCACTGCGGCTaGCCCCTGCTGCTTGTACCC +
Preference number: 4 (lower is better)
Translates to: KSQFPACCSALRVCVLILSIHCG*PLLLVP
Trigger: GGGTACAAGCAGCAGGGGCCAGCCGCAGTGGATGCT...AAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp CATCGGCCATGGAGAGGGTTGGGCTGCAGAGCTGTGATTGCCAGAGGCCCTTCCTCAGTAGAGACAATGTaGCCAATGGCCCCTTTGGGG +
Preference number: 4 (lower is better)
Translates to: HRPWRGLGCRAVIARGPSSVETM*PMAPLG
Trigger: CCCCAAAGGGGCCATTGGCCACATTGTCTCTACTGA...GGAAGGGCCTCTGGCAATCACAGCTCTGCAGCCCAACCCTCTCCATGGCCGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp AGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTCCACTTGTGGCCTCTTaGGCTTGGAGGCTGAGCCGG +
Preference number: 4 (lower is better)
Translates to: SHSFQRAAQPSECVCSSFPLVAS*AWRLSR
Trigger: CCGGCTCAGCCTCCAAGCCCAAGAGGCCACAAGTGG...AAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000490507.1
CDS-3UTR TCA 90 bp GGGTTGGGCTGCAGAGCTGTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGAAACACCTTCAGCTCTaGCCTCCCACAGGTTGTCAG +
Preference number: 4 (lower is better)
Translates to: GLGCRAVIARGPSLRTVGKHLQL*PPTGCQ
Trigger: CTGACAACCTGTGGGAGGTCAGAGCTGAAGGTGTTT...CCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCACAGCTCTGCAGCCCAACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp AGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCGGTCTGGCCACTGCTTaGAGTTGCGTTGGGGGTCAC +
Preference number: 4 (lower is better)
Translates to: SVLLSPPSVCAHPFHRSPGLATA*SCVGGH
Trigger: GTGACCCCCAACGCAACTTCAAGCAGTGGCCAGACC...GGGACTTCTATGAAAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp AAGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTACCAGGGACTGGATATaGCTGGCCAGGGAGCACTGG +
Preference number: 4 (lower is better)
Translates to: KSQFPACCSALRVCVLILTRDWI*LAREHW
Trigger: CCAGTGCTCCCTGGCCAGTCATATCCAGTCCCTGGT...AAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp CATCGGCCATGGAGAGGGTTGGGCTGCAGAGCTGTGATTGCCAGAGGCCCTTCCCTGAAGAGCAGTAGTTaGATCCTGGGATTCCCCCAA +
Preference number: 4 (lower is better)
Translates to: HRPWRGLGCRAVIARGPSLKSSS*ILGFPQ
Trigger: TTGGGGGAATCCCAGGATTCAACTACTGCTCTTCAG...GGAAGGGCCTCTGGCAATCACAGCTCTGCAGCCCAACCCTCTCCATGGCCGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp AAGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTGGGAGGTCATGGAGATaGGGCTCAGCGCCGTCTGAA +
Preference number: 4 (lower is better)
Translates to: KSQFPACCSALRVCVLILGRSWR*GSAPSE
Trigger: TTCAGACGGCGCTGAGCCTCATCTCCATGACCTCCC...AAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp AGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTGAAAGCCCAGGATGCTaGGAAGGCCGAGGCATTCGG +
Preference number: 4 (lower is better)
Translates to: SHSFQRAAQPSECVCSSFESPGC*EGRGIR
Trigger: CCGAATGCCTCGGCCTTCTCAGCATCCTGGGCTTTC...AAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp AGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCGCCACTTCTGCAGCATaGTCCTGTCAGAGCCGGGGT +
Preference number: 4 (lower is better)
Translates to: SVLLSPPSVCAHPFHRSPATSAA*SCQSRG
Trigger: ACCCCGGCTCTGACAGGATCATGCTGCAGAAGTGGC...GGGACTTCTATGAAAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp CATCGGCCATGGAGAGGGTTGGGCTGCAGAGCTGTGATTGCCAGAGGCCCTTCCCAAGTTCAATGTCTCTaGGGTGTAGTCTGCGAGGAC +
Preference number: 4 (lower is better)
Translates to: HRPWRGLGCRAVIARGPSQVQCL*GVVCED
Trigger: GTCCTCGCAGACTACACCTCAGAGACATTGAACTTG...GGAAGGGCCTCTGGCAATCACAGCTCTGCAGCCCAACCCTCTCCATGGCCGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp TGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGGTTGGGCTGGGTAGGAGGCCACGATaGTGGCCGAGGAGTAGTGGG +
Preference number: 4 (lower is better)
Translates to: CVLILFIEVPSAMERVGLGRRPR*WPRSSG
Trigger: CCCACTACTCCTCGGCCATCATCGTGGCCTCCTACC...CAGCCCAACCCTCTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp AGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTACGCTGCCAGGCACGTaGCAGCCTGTGTGTGTCCAT +
Preference number: 4 (lower is better)
Translates to: SHSFQRAAQPSECVCSSFTLPGT*QPVCVH
Trigger: ATGGACACACACAGGCTGTCACGTGCCTGGCAGCGT...AAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp AAGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTGGGCTGCAGAGCTGTaGTTGCCAGAGGCCCTTCCT +
Preference number: 4 (lower is better)
Translates to: KSQFPACCSALRVCVLILWAAEL*LPEALP
Trigger: AGGAAGGGCCTCTGGCAATCACAGCTCTGCAGCCCA...AAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000490507.1
CDS-3UTR TCA 90 bp AGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTCCAGAGGCCCTTCCTTaGGAACTGGACACGGCCAGA +
Preference number: 4 (lower is better)
Translates to: SHSFQRAAQPSECVCSSFPEALP*ELDTAR
Trigger: TCTGGCCGTGTCCAGTTCTCAAGGAAGGGCCTCTGG...AAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490507.1
CDS-3UTR GCA 90 bp GTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGAAGGAGGCCCTGGGGGTTGATCTTCTGCCTCCATaGCGTGGCAAAGCAGATCTG +
Preference number: 4 (lower is better)
Translates to: VIARGPSLRTVGKEALGVDLLPP*RGKADL
Trigger: CAGATCTGCTTTGCCACGGCATGGAGGCAGAAGATC...AACCCCCAGGGCCTCCTTCCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR GCA 90 bp GCCCTCCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGGTGGGGCTGGAGGACTaGCCTCCATGTGGGACATCA +
Preference number: 4 (lower is better)
Translates to: ALRVCVLILFIEVPSAMEVGLED*PPCGTS
Trigger: TGATGTCCCACATGGAGGGCAGTCCTCCAGCCCCAC...CTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACACACTCGGAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR GCA 90 bp AAGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTCAGCAACTGTCCAGCTaGCAACCGAGCTTGCTCCGC +
Preference number: 4 (lower is better)
Translates to: KSQFPACCSALRVCVLILQQLSS*QPSLLR
Trigger: GCGGAGCAAGCTCGGTTGGCAGCTGGACAGTTGCTG...AAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR GCA 90 bp AGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTCAGACTCAGCAACCCTaGCCAGCGTCTCCGAGTCTG +
Preference number: 4 (lower is better)
Translates to: SHSFQRAAQPSECVCSSFQTQQP*PASPSL
Trigger: CAGACTCGGAGACGCTGGGCAGGGTTGCTGAGTCTG...AAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR GCA 90 bp CATCGGCCATGGAGAGGGTTGGGCTGCAGAGCTGTGATTGCCAGAGGCCCTTCCATGATCTCTACAAACTaGGAGATGGGCTGCAGGGTC +
Preference number: 4 (lower is better)
Translates to: HRPWRGLGCRAVIARGPSMISTN*EMGCRV
Trigger: GACCCTGCAGCCCATCTCGCAGTTTGTAGAGATCAT...GGAAGGGCCTCTGGCAATCACAGCTCTGCAGCCCAACCCTCTCCATGGCCGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR GCA 90 bp AGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTTTGACAGGGTCCCAGTaGAGCGCTGCGGACACAGCA +
Preference number: 4 (lower is better)
Translates to: SHSFQRAAQPSECVCSSFLTGSQ*SAADTA
Trigger: TGCTGTGTCCGCAGCGCTGCACTGGGACCCTGTCAA...AAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR GCA 90 bp AGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTGGGTGCCGCTGGCCATaGTGTCCAGAAAGCCAAGGA +
Preference number: 4 (lower is better)
Translates to: SHSFQRAAQPSECVCSSFGCRWP*CPESQG
Trigger: TCCTTGGCTTTCTGGACAGCATGGCCAGCGGCACCC...AAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR GCA 90 bp GCTGTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGAAGGAGGCCCTGGGGTCCTCCCCTTGGACATaGACAGCTTGGAAGTTACCA +
Preference number: 4 (lower is better)
Translates to: AVIARGPSLRTVGKEALGSSPWT*TAWKLP
Trigger: TGGTAACTTCCAAGCTGTGCATGTCCAAGGGGAGGA...CCCCAGGGCCTCCTTCCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR GCA 90 bp GGGTTGGGCTGCAGAGCTGTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGCCGTCCATGCAGATCTaGCTCTCATTCACCGACGAA +
Preference number: 4 (lower is better)
Translates to: GLGCRAVIARGPSLRTVGPSMQI*LSFTDE
Trigger: TTCGTCGGTGAATGAGAGGCAGATCTGCATGGACGG...CCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCACAGCTCTGCAGCCCAACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR GCA 90 bp GGGTTGGGCTGCAGAGCTGTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGATGAAGAGGAGGATATaGCTGGGGTCTGCCGAGAAC +
Preference number: 4 (lower is better)
Translates to: GLGCRAVIARGPSLRTVGMKRRI*LGSAEN
Trigger: GTTCTCGGCAGACCCCAGGCATATCCTCCTCTTCAT...CCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCACAGCTCTGCAGCCCAACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR GCA 90 bp AGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTGCATCCTCCAGGGTCTaGTGCCTTTGTGCCACCAGC +
Preference number: 4 (lower is better)
Translates to: SHSFQRAAQPSECVCSSFASSRV*CLCATS
Trigger: GCTGGTGGCACAAAGGCAGCAGACCCTGGAGGATGC...AAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR GCA 90 bp AGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCAGAAGGTCAGCTGGGTaGAGTCCACCCCCACCTCGT +
Preference number: 4 (lower is better)
Translates to: SVLLSPPSVCAHPFHRSPRRSAG*SPPPPR
Trigger: ACGAGGTGGGGGTGGACTGCACCCAGCTGACCTTCT...GGGACTTCTATGAAAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR GCA 90 bp GCCCTCCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGAGGAAGCGAGCCTaGCGTAGCTCCCGCATGTCA +
Preference number: 4 (lower is better)
Translates to: ALRVCVLILFIEVPSAMERRKRA*RSSRMS
Trigger: TGACATGCGGGAGCTACGGCAGGCTCGCTTCCTCCT...CTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACACACTCGGAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR GCA 90 bp CCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGGTGGCCAGAGCAGTCACTaGGGGGCTGGTTTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: PSVCAHPFHRSPIGHGEGGQSSH*GAGFAG
Trigger: CCCAGCAAAACCAGCCCCGCAGTGACTGCTCTGGCC...ACCCTCTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACACACTCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp TGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGGTTGGGCTGGCAGATCTGGAGGGGTaGCCGTCAGCGCCTGTAGAC +
Preference number: 4 (lower is better)
Translates to: CVLILFIEVPSAMERVGLADLEG*PSAPVD
Trigger: GTCTACAGGCGCTGACGGCCACCCCTCCAGATCTGC...CAGCCCAACCCTCTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp CAGCACCTGACGCTACCTAATACAGGGTACTGCCTGCCACATACAGTGGCTAACGTGGCAAAGCAGATCTaGAGGGGTGGCCGTCAGCGC +
Preference number: 4 (lower is better)
Translates to: QHLTLPNTGYCLPHTVANVAKQI*RGGRQR
Trigger: GCGCTGACGGCCACCCCTCCAGATCTGCTTTGCCAC...GTTAGCCACTGTATGTGGCAGGCAGTACCCTGTATTAGGTAGCGTCAGGTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360890.6
CDS-3UTR CCA 90 bp AAGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTAGAGAGCTGTGGGGCTaGAGGACTGCCCTCCATGTG +
Preference number: 4 (lower is better)
Translates to: KSQFPACCSALRVCVLILRELWG*RTALHV
Trigger: CACATGGAGGGCAGTCCTCCAGCCCCACAGCTCTCT...AAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp AGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTCCCACAAGGGCCTTCTaGAGTTGCTGGGCAAGCTGG +
Preference number: 4 (lower is better)
Translates to: SHSFQRAAQPSECVCSSFPTRAF*SCWASW
Trigger: CCAGCTTGCCCAGCAACTCCAGAAGGCCCTTGTGGG...AAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp AGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCGCTCCAGGGTCTGTCTaGGGGATACTGCTCCCCATG +
Preference number: 4 (lower is better)
Translates to: SVLLSPPSVCAHPFHRSPAPGSV*GILLPM
Trigger: CATGGGGAGCAGTATCCCCCAGACAGACCCTGGAGC...GGGACTTCTATGAAAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp AGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCCAACCGGCCCCTGCTTaGTCCTCAGGGACTCCTTCA +
Preference number: 4 (lower is better)
Translates to: SVLLSPPSVCAHPFHRSPQPAPA*SSGTPS
Trigger: TGAAGGAGTCCCTGAGGACCAAGCAGGGGCCGGTTG...GGGACTTCTATGAAAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp GGGTTGGGCTGCAGAGCTGTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGTCCGGTTCAATGGCCTaGGAAGCGAGCTTCTCAAAG +
Preference number: 4 (lower is better)
Translates to: GLGCRAVIARGPSLRTVGSGSMA*EASFSK
Trigger: CTTTGAGAAGCTCGCTTCCCAGGCCATTGAACCGGA...CCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCACAGCTCTGCAGCCCAACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp AAGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTGCTGGCAGCAGGGCTaGAGTGGAATACCCTCACCC +
Preference number: 4 (lower is better)
Translates to: KSQFPACCSALRVCVLILCWQQG*SGIPSP
Trigger: GGGTGAGGGTATTCCACTCCAGCCCTGCTGCCAGCA...AAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp CATCGGCCATGGAGAGGGTTGGGCTGCAGAGCTGTGATTGCCAGAGGCCCTTCCTCTGGAATGTGGACGTaGTGGGCCAGAAAGTCATTC +
Preference number: 4 (lower is better)
Translates to: HRPWRGLGCRAVIARGPSSGMWT*WARKSF
Trigger: GAATGACTTTCTGGCCCACCACGTCCACATTCCAGA...GGAAGGGCCTCTGGCAATCACAGCTCTGCAGCCCAACCCTCTCCATGGCCGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp CATCGGCCATGGAGAGGGTTGGGCTGCAGAGCTGTGATTGCCAGAGGCCCTTCCCATCAGCTCTGTGAGTaGTGTCTGCAGGAAGAAGGT +
Preference number: 4 (lower is better)
Translates to: HRPWRGLGCRAVIARGPSHQLCE*CLQEEG
Trigger: ACCTTCTTCCTGCAGACACCACTCACAGAGCTGATG...GGAAGGGCCTCTGGCAATCACAGCTCTGCAGCCCAACCCTCTCCATGGCCGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp AGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTGGGGGAAGGCGGCTATaGCCAAGGTCTGGAGGAACT +
Preference number: 4 (lower is better)
Translates to: SHSFQRAAQPSECVCSSFGGRRL*PRSGGT
Trigger: AGTTCCTCCAGACCTTGGCCATAGCCGCCTTCCCCC...AAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp TGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGGTTGGGCTGCGGCCTCAGGACTGCTaGTGTTCCGGGTGGACTCAG +
Preference number: 4 (lower is better)
Translates to: CVLILFIEVPSAMERVGLRPQDC*CSGWTQ
Trigger: CTGAGTCCACCCGGAACACCAGCAGTCCTGAGGCCG...CAGCCCAACCCTCTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp CATCGGCCATGGAGAGGGTTGGGCTGCAGAGCTGTGATTGCCAGAGGCCCTTCCTTCTCCACCAGCTTCTaGGTGAAGCAGGAGATGTTG +
Preference number: 4 (lower is better)
Translates to: HRPWRGLGCRAVIARGPSFSTSF*VKQEML
Trigger: CAACATCTCCTGCTTCACCCAGAAGCTGGTGGAGAA...GGAAGGGCCTCTGGCAATCACAGCTCTGCAGCCCAACCCTCTCCATGGCCGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp TGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGGTTGGGCTGGGCCTGGGTGAAGGGTaGCATCCGGACCAGGTAGGA +
Preference number: 4 (lower is better)
Translates to: CVLILFIEVPSAMERVGLGLGEG*HPDQVG
Trigger: TCCTACCTGGTCCGGATGCCACCCTTCACCCAGGCC...CAGCCCAACCCTCTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp AGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTGCAGGCTCACGGGGGTaGAGACATCCTTTCCAGGCA +
Preference number: 4 (lower is better)
Translates to: SHSFQRAAQPSECVCSSFAGSRG*RHPFQA
Trigger: TGCCTGGAAAGGATGTCTCCACCCCCGTGAGCCTGC...AAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp AAGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTCTTTGACCGTGACCTaGGAGGGCCTCAGCGACTGC +
Preference number: 4 (lower is better)
Translates to: KSQFPACCSALRVCVLILSLTVT*EGLSDC
Trigger: GCAGTCGCTGAGGCCCTCCCAGGTCACGGTCAAAGA...AAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp TGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGGTTGGGCTGGGCAGCAGCAGGTTATaGCTCCTTCTGGGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: CVLILFIEVPSAMERVGLGSSRL*LLLGPR
Trigger: CCTGGGGCCCAGAAGGAGCCATAACCTGCTGCTGCC...CAGCCCAACCCTCTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp CCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGGTCCACTTGTGGCCTCTTaGGCTTGGAGGCTGAGCCGG +
Preference number: 4 (lower is better)
Translates to: PSVCAHPFHRSPIGHGEGPLVAS*AWRLSR
Trigger: CCGGCTCAGCCTCCAAGCCCAAGAGGCCACAAGTGG...ACCCTCTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACACACTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp AGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTCAGTCACTGCGGGGCTaGTTTTGCTGGGCTTCCCTG +
Preference number: 4 (lower is better)
Translates to: SHSFQRAAQPSECVCSSFQSLRG*FCWASL
Trigger: CAGGGAAGCCCAGCAAAACCAGCCCCGCAGTGACTG...AAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000490507.1
CDS-3UTR CCA 90 bp TGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGGTTGGGCTGCTGCCACCCTCAGCCTaGCACTGTTGTGCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: CVLILFIEVPSAMERVGLLPPSA*HCCARA
Trigger: GGCTCTGGCACAACAGTGCCAGGCTGAGGGTGGCAG...CAGCCCAACCCTCTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp GCTGTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGAAGGAGGCCCTGGGGCAGAGGATAGCCCTCTaGATTCTCAAACTCCAGGAA +
Preference number: 4 (lower is better)
Translates to: AVIARGPSLRTVGKEALGQRIAL*ILKLQE
Trigger: TTCCTGGAGTTTGAGAATTCAGAGGGCTATCCTCTG...CCCCAGGGCCTCCTTCCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp GTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGAAGGAGGCCCTGGGGGTTCCTCATGATGGAACTTaGAGCCTTCAAGCTGAGGGT +
Preference number: 4 (lower is better)
Translates to: VIARGPSLRTVGKEALGVPHDGT*SLQAEG
Trigger: ACCCTCAGCTTGAAGGCTTCAAGTTCCATCATGAGG...AACCCCCAGGGCCTCCTTCCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp GCCCTCCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGCCAGTTTCTCCCTTCTaGACATCCACAACCGGCCCC +
Preference number: 4 (lower is better)
Translates to: ALRVCVLILFIEVPSAMEPVSPF*TSTTGP
Trigger: GGGGCCGGTTGTGGATGTTCAGAAGGGAGAAACTGG...CTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACACACTCGGAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp AGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCCGTCTGGGCAGAGGCTaGCGGAGAAGCAAACAAAGG +
Preference number: 4 (lower is better)
Translates to: SVLLSPPSVCAHPFHRSPRLGRG*RRSKQR
Trigger: CCTTTGTTTGCTTCTCCGTCAGCCTCTGCCCAGACG...GGGACTTCTATGAAAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp TGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGGTTGGGCTGCTGTCGCTAAGGAGATaGGGCCCAGGAGGATGGCAG +
Preference number: 4 (lower is better)
Translates to: CVLILFIEVPSAMERVGLLSLRR*GPGGWQ
Trigger: CTGCCATCCTCCTGGGCCTCATCTCCTTAGCGACAG...CAGCCCAACCCTCTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp GTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGAAGGAGGCCCTGGGGGTTTCACCGACGAAGGCTTaGGGGTGTACACAACAAACA +
Preference number: 4 (lower is better)
Translates to: VIARGPSLRTVGKEALGVSPTKA*GCTQQT
Trigger: TGTTTGTTGTGTACACCCTCAAGCCTTCGTCGGTGA...AACCCCCAGGGCCTCCTTCCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp AGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTGCTTCTGCACTTGGCTaGGGCTCTTTGCCGTCTCTG +
Preference number: 4 (lower is better)
Translates to: SHSFQRAAQPSECVCSSFASALG*GSLPSL
Trigger: CAGAGACGGCAAAGAGCCTCAGCCAAGTGCAGAAGC...AAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp CATCGGCCATGGAGAGGGTTGGGCTGCAGAGCTGTGATTGCCAGAGGCCCTTCCAAGGAGACAAGCGTTTaGTGCGTTTCCTCATTCGAG +
Preference number: 4 (lower is better)
Translates to: HRPWRGLGCRAVIARGPSKETSV*CVSSFE
Trigger: CTCGAATGAGGAAACGCATCAAACGCTTGTCTCCTT...GGAAGGGCCTCTGGCAATCACAGCTCTGCAGCCCAACCCTCTCCATGGCCGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp AAGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTTCCTTGTGCCTTCCTaGGCTCAGGGCCTCCAAAGG +
Preference number: 4 (lower is better)
Translates to: KSQFPACCSALRVCVLILFLVPS*AQGLQR
Trigger: CCTTTGGAGGCCCTGAGCTCAGGAAGGCACAAGGAA...AAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp GCCCTCCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGACTGATGGTGATGGCTaGGATGCCTTCCCGATGGGC +
Preference number: 4 (lower is better)
Translates to: ALRVCVLILFIEVPSAMETDGDG*DAFPMG
Trigger: GCCCATCGGGAAGGCATCTCAGCCATCACCATCAGT...CTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACACACTCGGAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR GCA 90 bp GCCCTCCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGGCCTTCTGGAGTTaGTGGGCAAGCTGGTCAGAC +
Preference number: 4 (lower is better)
Translates to: ALRVCVLILFIEVPSAMERAFWS*WASWSD
Trigger: GTCTGACCAGCTTGCCCAGCAACTCCAGAAGGCCCT...CTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACACACTCGGAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR GCA 90 bp CAGCACCTGACGCTACCTAATACAGGGTACTGCCTGCCACATACAGTGGCTAACCAGAAGCAGCAGCTGTaGTCCCGAAGGCAGGTCGTG +
Preference number: 4 (lower is better)
Translates to: QHLTLPNTGYCLPHTVANQKQQL*SRRQVV
Trigger: CACGACCTGCCTTCGGGAGCACAGCTGCTGCTTCTG...GTTAGCCACTGTATGTGGCAGGCAGTACCCTGTATTAGGTAGCGTCAGGTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360890.6
CDS-3UTR GCA 90 bp CCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGGTAGGAGCTCCTCCAGATaGGGGTCCACTTCGCTCTGG +
Preference number: 4 (lower is better)
Translates to: PSVCAHPFHRSPIGHGEGRSSSR*GSTSLW
Trigger: CCAGAGCGAAGTGGACCCGCATCTGGAGGAGCTCCT...ACCCTCTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACACACTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR GCA 90 bp TGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGGTTGGGCTGAACTGCGAGATGGGCTaGAGGGTCCACTCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: CVLILFIEVPSAMERVGLNCEMG*RVHSSR
Trigger: CCTGCTGGAGTGGACCCTGCAGCCCATCTCGCAGTT...CAGCCCAACCCTCTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR GCA 90 bp AAGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTCAGTGGCAGCTCCATaGCGGCTGATCAGGAACCAG +
Preference number: 4 (lower is better)
Translates to: KSQFPACCSALRVCVLILSVAAP*RLIRNQ
Trigger: CTGGTTCCTGATCAGCCGGCATGGAGCTGCCACTGA...AAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR GCA 90 bp GCCCTCCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGTATCCACGCCCTCAGTaGTGCGTTCCACCCAGGATC +
Preference number: 4 (lower is better)
Translates to: ALRVCVLILFIEVPSAMEYPRPQ*CVPPRI
Trigger: GATCCTGGGTGGAACGCAGCACTGAGGGCGTGGATA...CTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACACACTCGGAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR GCA 90 bp CCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGGTGCAAGGCACCTTCTGTaGACAGCCCAGCCTGGAGGA +
Preference number: 4 (lower is better)
Translates to: PSVCAHPFHRSPIGHGEGARHLL*TAQPGG
Trigger: TCCTCCAGGCTGGGCTGTGCACAGAAGGTGCCTTGC...ACCCTCTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACACACTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR GCA 90 bp AGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTCTGCGGGGCTGGTTTTaGTGGGCTTCCCTGTCAAAG +
Preference number: 4 (lower is better)
Translates to: SHSFQRAAQPSECVCSSFLRGWF*WASLSK
Trigger: CTTTGACAGGGAAGCCCAGCAAAACCAGCCCCGCAG...AAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000490507.1
CDS-3UTR GCA 90 bp AAGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTCAGTTTCCAGCGTGCTaGTCAGCCCTCCGAGTGTGT +
Preference number: 4 (lower is better)
Translates to: KSQFPACCSALRVCVLILQFPAC*SALRVC
Trigger: ACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTG...AAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000490507.1
CDS-3UTR GCA 90 bp AGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTCAGTTTCCAGCGTGCTaGTCAGCCCTCCGAGTGTGT +
Preference number: 4 (lower is better)
Translates to: SHSFQRAAQPSECVCSSFQFPAC*SALRVC
Trigger: ACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTG...AAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000490507.1
CDS-3UTR GCA 90 bp AGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCTCACAGTTTCCAGCGTaGTGCTCAGCCCTCCGAGTG +
Preference number: 4 (lower is better)
Translates to: SVLLSPPSVCAHPFHRSPSQFPA*CSALRV
Trigger: CACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGA...GGGACTTCTATGAAAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR GCA 90 bp AGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTTCACAGTTTCCAGCGTaGTGCTCAGCCCTCCGAGTG +
Preference number: 4 (lower is better)
Translates to: SHSFQRAAQPSECVCSSFSQFPA*CSALRV
Trigger: CACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGA...AAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000490507.1
CDS-3UTR CCA 90 bp CAGCACCTGACGCTACCTAATACAGGGTACTGCCTGCCACATACAGTGGCTAACAGAGAGCTGTGGGGCTaGAGGACTGCCCTCCATGTG +
Preference number: 4 (lower is better)
Translates to: QHLTLPNTGYCLPHTVANRELWG*RTALHV
Trigger: CACATGGAGGGCAGTCCTCCAGCCCCACAGCTCTCT...GTTAGCCACTGTATGTGGCAGGCAGTACCCTGTATTAGGTAGCGTCAGGTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360890.6
CDS-3UTR CCA 90 bp CAGCACCTGACGCTACCTAATACAGGGTACTGCCTGCCACATACAGTGGCTAACCCCACAAGGGCCTTCTaGAGTTGCTGGGCAAGCTGG +
Preference number: 4 (lower is better)
Translates to: QHLTLPNTGYCLPHTVANPTRAF*SCWASW
Trigger: CCAGCTTGCCCAGCAACTCCAGAAGGCCCTTGTGGG...GTTAGCCACTGTATGTGGCAGGCAGTACCCTGTATTAGGTAGCGTCAGGTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360890.6
CDS-3UTR CCA 90 bp AGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTCATGAGGGTGCAGGATaGCCCAGGGCTCTCCTTGAT +
Preference number: 4 (lower is better)
Translates to: SHSFQRAAQPSECVCSSFHEGAG*PRALLD
Trigger: ATCAAGGAGAGCCCTGGGCCATCCTGCACCCTCATG...AAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp TGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGGTTGGGCTGGTGGGAGTGAGCCGCTaGAGGAAAAGGCAGTGCCCA +
Preference number: 4 (lower is better)
Translates to: CVLILFIEVPSAMERVGLVGVSR*RKRQCP
Trigger: TGGGCACTGCCTTTTCCTCCAGCGGCTCACTCCCAC...CAGCCCAACCCTCTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp AGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCAGGCTGCAGGTTGCGTaGGGAGGTCATGGAGATGAG +
Preference number: 4 (lower is better)
Translates to: SVLLSPPSVCAHPFHRSPRLQVA*GGHGDE
Trigger: CTCATCTCCATGACCTCCCCACGCAACCTGCAGCCT...GGGACTTCTATGAAAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp TGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGGTTGGGCTGTCAGTCCTGGCCAGGTaGCGCACCAACGTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: CVLILFIEVPSAMERVGLSVLAR*RTNVRK
Trigger: CTTCCTGACGTTGGTGCGCCACCTGGCCAGGACTGA...CAGCCCAACCCTCTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp GTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGAAGGAGGCCCTGGGGGTTGCCGCATACATGGTATaGTCATCTGTCGCTAAGGAG +
Preference number: 4 (lower is better)
Translates to: VIARGPSLRTVGKEALGVAAYMV*SSVAKE
Trigger: CTCCTTAGCGACAGATGACCATACCATGTATGCGGC...AACCCCCAGGGCCTCCTTCCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp GTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGAAGGAGGCCCTGGGGGTTGTCTTTCCAGATGTTTaGCTTCCAGCAGGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: VIARGPSLRTVGKEALGVVFPDV*LPAGRE
Trigger: TTCCCTGCCTGCTGGAAGCCAAACATCTGGAAAGAC...AACCCCCAGGGCCTCCTTCCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp AGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCTCAATGCCAGCACAGTaGTGCTGGCATGCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: SVLLSPPSVCAHPFHRSPSMPAQ*CWHAGG
Trigger: GCCACCTGCATGCCAGCACCACTGTGCTGGCATTGA...GGGACTTCTATGAAAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp GGGTTGGGCTGCAGAGCTGTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGTCAGGCAGTGGTGACTaGCTCTTCAGGTTGTCCATT +
Preference number: 4 (lower is better)
Translates to: GLGCRAVIARGPSLRTVGSGSGD*LFRLSI
Trigger: AATGGACAACCTGAAGAGCCAGTCACCACTGCCTGA...CCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCACAGCTCTGCAGCCCAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp AAGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTAGGACTTCTTCCTGGTaGTGCCTCTGCAGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: KSQFPACCSALRVCVLILRTSSW*CLCRSH
Trigger: GTGGCTCCTGCAGAGGCACCACCAGGAAGAAGTCCT...AAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp AAGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTCGGGCATCAGCTTCATaGCTGAGGACAGGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: KSQFPACCSALRVCVLILRASAS*LRTGFH
Trigger: GTGGAAGCCTGTCCTCAGCCATGAAGCTGATGCCCG...AAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp AGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCATGGGGAACAGGGCTTaGTTTCTTCCCCCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: SVLLSPPSVCAHPFHRSPMGNRA*FLPPGS
Trigger: GGAGCCAGGGGGAAGAAACCAAGCCCTGTTCCCCAT...GGGACTTCTATGAAAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp GCCCTCCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGCCTTCTGACACCAGGTaGCCCTGCACAATCACCAGG +
Preference number: 4 (lower is better)
Translates to: ALRVCVLILFIEVPSAMEPSDTR*PCTITR
Trigger: CCTGGTGATTGTGCAGGGCCACCTGGTGTCAGAAGG...CTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACACACTCGGAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp GCTGTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGAAGGAGGCCCTGGGGACGAGTAATGGTCAGTaGACCTGTCTTTGCTGCACA +
Preference number: 4 (lower is better)
Translates to: AVIARGPSLRTVGKEALGTSNGQ*TCLCCT
Trigger: TGTGCAGCAAAGACAGGTCCACTGACCATTACTCGT...CCCCAGGGCCTCCTTCCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp GCTGTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGAAGGAGGCCCTGGGGCCCTTCAGGCTGGGTTaGAAAGAGCAGAAGCTTTTA +
Preference number: 4 (lower is better)
Translates to: AVIARGPSLRTVGKEALGPFRLG*KEQKLL
Trigger: TAAAAGCTTCTGCTCTTTCCAACCCAGCCTGAAGGG...CCCCAGGGCCTCCTTCCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp AGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTCACTCATGTTCTCTCTaGAGGCCGACTCCCACGTGC +
Preference number: 4 (lower is better)
Translates to: SHSFQRAAQPSECVCSSFHSCSL*RPTPTC
Trigger: GCACGTGGGAGTCGGCCTCCAGAGAGAACATGAGTG...AAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp AGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCGGTGACAATCGTTGTTaGGGATGGGCACACGGCGCA +
Preference number: 4 (lower is better)
Translates to: SVLLSPPSVCAHPFHRSPGDNRC*GWAHGA
Trigger: TGCGCCGTGTGCCCATCCCCAACAACGATTGTCACC...GGGACTTCTATGAAAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp TGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGGTTGGGCTGCAGTCACTGCGGGGCTaGTTTTGCTGGGCTTCCCTG +
Preference number: 4 (lower is better)
Translates to: CVLILFIEVPSAMERVGLQSLRG*FCWASL
Trigger: CAGGGAAGCCCAGCAAAACCAGCCCCGCAGTGACTG...CAGCCCAACCCTCTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp AAGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTAAGTCCCATCGGCCATaGAGAGGGTTGGGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: KSQFPACCSALRVCVLILKSHRP*RGLGCR
Trigger: TCTGCAGCCCAACCCTCTCCATGGCCGATGGGACTT...AAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000490507.1
CDS-3UTR CCA 90 bp AGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTAAGTCCCATCGGCCATaGAGAGGGTTGGGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: SHSFQRAAQPSECVCSSFKSHRP*RGLGCR
Trigger: TCTGCAGCCCAACCCTCTCCATGGCCGATGGGACTT...AAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000490507.1
CDS-3UTR CCA 90 bp GCTGTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGAAGGAGGCCCTGGGGAATTTCGTGTGCAGCTaGGCATCACCAAGTCACAGT +
Preference number: 4 (lower is better)
Translates to: AVIARGPSLRTVGKEALGNFVCS*ASPSHS
Trigger: ACTGTGACTTGGTGATGCCCAGCTGCACACGAAATT...CCCCAGGGCCTCCTTCCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp CAGCACCTGACGCTACCTAATACAGGGTACTGCCTGCCACATACAGTGGCTAACCCGAGTCTGTCCCCGTaGGCACGTACACTGACTTCA +
Preference number: 4 (lower is better)
Translates to: QHLTLPNTGYCLPHTVANPSLSP*ARTLTS
Trigger: TGAAGTCAGTGTACGTGCTCACGGGGACAGACTCGG...GTTAGCCACTGTATGTGGCAGGCAGTACCCTGTATTAGGTAGCGTCAGGTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360890.6
CDS-3UTR TCA 90 bp TTGTTACAGCACCTGACGCTACCTAATACAGGGTACTGCCTGCCACATACAGTGCTGCAGCTCACTTCCTaGGAGGAGTCCCTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: LLQHLTLPNTGYCLPHTVLQLTS*EESLQA
Trigger: GGCCTGGAGGGACTCCTCTCAGGAAGTGAGCTGCAG...CACTGTATGTGGCAGGCAGTACCCTGTATTAGGTAGCGTCAGGTGCTGTAACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360890.6
CDS-3UTR TCA 90 bp GGGTTGGGCTGCAGAGCTGTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGCATGGTCCTGATGACTaGCAAGACTTGTATGCAGAG +
Preference number: 4 (lower is better)
Translates to: GLGCRAVIARGPSLRTVGHGPDD*QDLYAE
Trigger: CTCTGCATACAAGTCTTGTCAGTCATCAGGACCATG...CCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCACAGCTCTGCAGCCCAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp AGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTCCGGCTTCAGGGGCATaGTCTCTACAAACTGCGAGA +
Preference number: 4 (lower is better)
Translates to: SHSFQRAAQPSECVCSSFPASGA*SLQTAR
Trigger: TCTCGCAGTTTGTAGAGATCATGCCCCTGAAGCCGG...AAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp GGGTTGGGCTGCAGAGCTGTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGGGACACTTTGTTTCCTaGCTTCCTCATGATCTTGGC +
Preference number: 4 (lower is better)
Translates to: GLGCRAVIARGPSLRTVGGHFVS*LPHDLG
Trigger: GCCAAGATCATGAGGAAGTCAGGAAACAAAGTGTCC...CCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCACAGCTCTGCAGCCCAACCC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp CATCGGCCATGGAGAGGGTTGGGCTGCAGAGCTGTGATTGCCAGAGGCCCTTCCAGCCTTTCAGAAGTGTaGCTACAATCCTCAGCATCA +
Preference number: 4 (lower is better)
Translates to: HRPWRGLGCRAVIARGPSSLSEV*LQSSAS
Trigger: TGATGCTGAGGATTGTAGTCACACTTCTGAAAGGCT...GGAAGGGCCTCTGGCAATCACAGCTCTGCAGCCCAACCCTCTCCATGGCCGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp AAGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTAGCTGCAGCTCCCCTTaGGTGGATGAGCATAGAGCA +
Preference number: 4 (lower is better)
Translates to: KSQFPACCSALRVCVLILSCSSP*VDEHRA
Trigger: TGCTCTATGCTCATCCACTCAAGGGGAGCTGCAGCT...AAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp AGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCAGGCTCAGCGCCGTCTaGAGAGCAGTAGTTGAATCC +
Preference number: 4 (lower is better)
Translates to: SVLLSPPSVCAHPFHRSPRLSAV*RAVVES
Trigger: GGATTCAACTACTGCTCTTCAGACGGCGCTGAGCCT...GGGACTTCTATGAAAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp CATCGGCCATGGAGAGGGTTGGGCTGCAGAGCTGTGATTGCCAGAGGCCCTTCCGAGGAGCTGGCTATGTaGAGTCCAAAAGAAACTCTT +
Preference number: 4 (lower is better)
Translates to: HRPWRGLGCRAVIARGPSEELAM*SPKETL
Trigger: AAGAGTTTCTTTTGGACTTCACATAGCCAGCTCCTC...GGAAGGGCCTCTGGCAATCACAGCTCTGCAGCCCAACCCTCTCCATGGCCGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp GCTGTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGAAGGAGGCCCTGGGGCCTTCCCTTGGTGATTaGAGGATTTCCAAAAGATGG +
Preference number: 4 (lower is better)
Translates to: AVIARGPSLRTVGKEALGPSLGD*RISKRW
Trigger: CCATCTTTTGGAAATCCTTCAATCACCAAGGGAAGG...CCCCAGGGCCTCCTTCCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp GGGTTGGGCTGCAGAGCTGTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGTGCTGTATAAAGTGCTaGGGACAGTGTCCCTTTGAG +
Preference number: 4 (lower is better)
Translates to: GLGCRAVIARGPSLRTVGCCIKC*GQCPFE
Trigger: CTCAAAGGGACACTGTCCTCAGCACTTTATACAGCA...CCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCACAGCTCTGCAGCCCAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp TGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGGTTGGGCTGAATGCTGCCAGGCCTTaGGCATCGTCTCCTCCCAGA +
Preference number: 4 (lower is better)
Translates to: CVLILFIEVPSAMERVGLNAARP*ASSPPR
Trigger: TCTGGGAGGAGACGATGCTCAAGGCCTGGCAGCATT...CAGCCCAACCCTCTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp AGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTAGGCGTTGGCTGCCTTaGTGTTGCCACATTTTCGCC +
Preference number: 4 (lower is better)
Translates to: SHSFQRAAQPSECVCSSFRRWLP*CCHIFA
Trigger: GGCGAAAATGTGGCAACATCAAGGCAGCCAACGCCT...AAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp TGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGGTTGGGCTGGGTATCTCCTTAGACTaGGGGTGTCCTCCGAGGTGG +
Preference number: 4 (lower is better)
Translates to: CVLILFIEVPSAMERVGLGISLD*GCPPRW
Trigger: CCACCTCGGAGGACACCCTCAGTCTAAGGAGATACC...CAGCCCAACCCTCTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp CCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGGTCTGGGGTCAGCTCCCTaGCGTCACTCATGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: PSVCAHPFHRSPIGHGEGLGSAP*RHSCSL
Trigger: GAGAGAACATGAGTGACGTCAGGGAGCTGACCCCAG...ACCCTCTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACACACTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp CCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGGTGGCCTTTGGTCATGCTaGGCTCCCACACACACACCA +
Preference number: 4 (lower is better)
Translates to: PSVCAHPFHRSPIGHGEGGLWSC*APTHTP
Trigger: TGGTGTGTGTGTGGGAGCTCAGCATGACCAAAGGCC...ACCCTCTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACACACTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR GCA 90 bp CCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGGTTCCAGGTCTGGCCACTaGTTGAAGTTGCGTTGGGGG +
Preference number: 4 (lower is better)
Translates to: PSVCAHPFHRSPIGHGEGSRSGH*LKLRWG
Trigger: CCCCCAACGCAACTTCAAGCAGTGGCCAGACCTGGA...ACCCTCTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACACACTCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR GCA 90 bp TGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGGTTGGGCTGAGCCCAGCTCCACAGTaGCAGCCACTGAGAGGATCA +
Preference number: 4 (lower is better)
Translates to: CVLILFIEVPSAMERVGLSPAPQ*QPLRGS
Trigger: TGATCCTCTCAGTGGCTGGCACTGTGGAGCTGGGCT...CAGCCCAACCCTCTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR GCA 90 bp GTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGAAGGAGGCCCTGGGGGTTTCCAGAGCTCGAAATTaGAGAGGATGTGCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: VIARGPSLRTVGKEALGVSRARN*RGCAGR
Trigger: TCTTCCAGCACATCCTCTGCAATTTCGAGCTCTGGA...AACCCCCAGGGCCTCCTTCCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR GCA 90 bp AGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTTCCCTCAAGAGGAGCTaGGTGAACTCCCTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: SHSFQRAAQPSECVCSSFSLKRS*VNSLSF
Trigger: GAAGCTGAGGGAGTTCACGCAGCTCCTCTTGAGGGA...AAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR GCA 90 bp CATCGGCCATGGAGAGGGTTGGGCTGCAGAGCTGTGATTGCCAGAGGCCCTTCCAGTAGCAAAAGGCAATaGATGAGACACAGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: HRPWRGLGCRAVIARGPSSSKRQ*MRHRRK
Trigger: CTTCCTCCTGTGTCTCATGCATTGCCTTTTGCTACT...GGAAGGGCCTCTGGCAATCACAGCTCTGCAGCCCAACCCTCTCCATGGCCGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR GCA 90 bp TGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGGTTGGGCTGTGTGCCACCAGCTGCTaGCAGAGAGTCTGCACTGTC +
Preference number: 4 (lower is better)
Translates to: CVLILFIEVPSAMERVGLCATSC*QRVCTV
Trigger: GACAGTGCAGACTCTCTGGCAGCAGCTGGTGGCACA...CAGCCCAACCCTCTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR GCA 90 bp GTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGAAGGAGGCCCTGGGGGTTCTTTTCTGCCACTTCTaGAGCATGATCCTGTCAGAG +
Preference number: 4 (lower is better)
Translates to: VIARGPSLRTVGKEALGVLFCHF*SMILSE
Trigger: CTCTGACAGGATCATGCTGCAGAAGTGGCAGAAAAG...AACCCCCAGGGCCTCCTTCCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR GCA 90 bp AGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCACTGCATGTAGTCATTaGAGGTTCTCCCAGCCGCGG +
Preference number: 4 (lower is better)
Translates to: SVLLSPPSVCAHPFHRSPTACSH*RFSQPR
Trigger: CCGCGGCTGGGAGAACCTGCAATGACTACATGCAGT...GGGACTTCTATGAAAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR GCA 90 bp GCCCTCCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGGTGGAACATTCTGTCTaGCACGTCGAAGCTTCCGCC +
Preference number: 4 (lower is better)
Translates to: ALRVCVLILFIEVPSAMEVEHSV*HVEASA
Trigger: GGCGGAAGCTTCGACGTGGCAGACAGAATGTTCCAC...CTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACACACTCGGAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR GCA 90 bp AAGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTGGAGAGGGTTGGGCTaGAGAGCTGTGATTGCCAGA +
Preference number: 4 (lower is better)
Translates to: KSQFPACCSALRVCVLILWRGLG*RAVIAR
Trigger: TCTGGCAATCACAGCTCTGCAGCCCAACCCTCTCCA...AAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000490507.1
CDS-3UTR CCA 90 bp TGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGGTTGGGCTGAGCCTGGAGAGGTTCTaGAGGGAGAGCCTGACACAG +
Preference number: 4 (lower is better)
Translates to: CVLILFIEVPSAMERVGLSLERF*RESLTQ
Trigger: CTGTGTCAGGCTCTCCCTCCAGAACCTCTCCAGGCT...CAGCCCAACCCTCTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp AAGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTGGGACTGGATATGACTaGCCAGGGAGCACTGGATCT +
Preference number: 4 (lower is better)
Translates to: KSQFPACCSALRVCVLILGTGYD*PGSTGS
Trigger: AGATCCAGTGCTCCCTGGCCAGTCATATCCAGTCCC...AAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp AAGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTGCACATCCGGTTCAATaGCCTGGGAAGCGAGCTTCT +
Preference number: 4 (lower is better)
Translates to: KSQFPACCSALRVCVLILAHPVQ*PGKRAS
Trigger: AGAAGCTCGCTTCCCAGGCCATTGAACCGGATGTGC...AAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp GCCCTCCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAAATTCCACAAACGATaGGGCCAGGGCTGCCCTCTG +
Preference number: 4 (lower is better)
Translates to: ALRVCVLILFIEVPSAMEKFHKR*GQGCPL
Trigger: CAGAGGGCAGCCCTGGCCCCATCGTTTGTGGAATTT...CTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACACACTCGGAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp CCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGGTGAGGGAACGGTCTGGTaGCACCTGTCCCAATTCCTC +
Preference number: 4 (lower is better)
Translates to: PSVCAHPFHRSPIGHGEGEGTVW*HLSQFL
Trigger: GAGGAATTGGGACAGGTGCCACCAGACCGTTCCCTC...ACCCTCTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACACACTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp GCCCTCCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGTCCAGGTCCTCCCCTTaGACATGCACAGCTTGGAAG +
Preference number: 4 (lower is better)
Translates to: ALRVCVLILFIEVPSAMESRSSP*TCTAWK
Trigger: CTTCCAAGCTGTGCATGTCCAAGGGGAGGACCTGGA...CTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACACACTCGGAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp GCCCTCCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGCTGCAACAAAGGGCGTaGCTTCACTGTCCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: ALRVCVLILFIEVPSAMELQQRA*LHCPGP
Trigger: AGGACCTGGACAGTGAAGCCACGCCCTTTGTTGCAG...CTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACACACTCGGAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp GCCCTCCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGAGACCCTGACAGGTaGCCAGCACAATTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: ALRVCVLILFIEVPSAMERDPDR*PAQFLS
Trigger: GCTGAGGAATTGTGCTGGCCACCTGTCAGGGTCTCT...CTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACACACTCGGAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp AGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCGCAGCAGGGCTGGAGTaGAATACCCTCACCCCTAAT +
Preference number: 4 (lower is better)
Translates to: SVLLSPPSVCAHPFHRSPAAGLE*NTLTPN
Trigger: ATTAGGGGTGAGGGTATTCCACTCCAGCCCTGCTGC...GGGACTTCTATGAAAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp GCTGTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGAAGGAGGCCCTGGGGAGGATTTCCAAAAGATaGGAAAAGAGGCTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: AVIARGPSLRTVGKEALGRISKR*EKRLSS
Trigger: GGAGCTCAGCCTCTTTTCCCATCTTTTGGAAATCCT...CCCCAGGGCCTCCTTCCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp AAGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTCATCAAGGCTGTCTTTaGGCCCGTCCATCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: KSQFPACCSALRVCVLILHQGCL*ARPSAL
Trigger: CAGAGCTGATGGACGGGCCCAAAGACAGCCTTGATG...AAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp CCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGGTTGGAGGACTTCTTCCTaGTGGTGCCTCTGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: PSVCAHPFHRSPIGHGEGWRTSS*WCLCRS
Trigger: GCTCCTGCAGAGGCACCACCAGGAAGAAGTCCTCCA...ACCCTCTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACACACTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp CCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGGTGGGGCTGGCTCATGGTaGCCTTCAGCATTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: PSVCAHPFHRSPIGHGEGGAGSW*PSAFPG
Trigger: TCCTGGAAATGCTGAAGGCCACCATGAGCCAGCCCC...ACCCTCTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACACACTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp AGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTCCAGTCGAGTTCCCATaGGGAACAGGGCTTGGTTTC +
Preference number: 4 (lower is better)
Translates to: SHSFQRAAQPSECVCSSFPVEFP*GTGLGF
Trigger: GAAACCAAGCCCTGTTCCCCATGGGAACTCGACTGG...AAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp AAGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTTCTTCTCCCACTTGTaGCCTCTTGGGCTTGGAGGC +
Preference number: 4 (lower is better)
Translates to: KSQFPACCSALRVCVLILFFSHL*PLGLGG
Trigger: GCCTCCAAGCCCAAGAGGCCACAAGTGGGAGAAGAA...AAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000490507.1
CDS-3UTR CCA 90 bp AGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTTTCTTCTCCCACTTGTaGCCTCTTGGGCTTGGAGGC +
Preference number: 4 (lower is better)
Translates to: SHSFQRAAQPSECVCSSFFFSHL*PLGLGG
Trigger: GCCTCCAAGCCCAAGAGGCCACAAGTGGGAGAAGAA...AAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000490507.1
CDS-3UTR CCA 90 bp AAGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTCCCTTCCTTGAGAACTaGACACGGCCAGAGCAGTCA +
Preference number: 4 (lower is better)
Translates to: KSQFPACCSALRVCVLILPFLEN*TRPEQS
Trigger: TGACTGCTCTGGCCGTGTCCAGTTCTCAAGGAAGGG...AAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490507.1
CDS-3UTR TCA 90 bp TGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGGTTGGGCTGCTCAACAGGCTCTTCTaGCGCTCAATGGGGCTCTTG +
Preference number: 4 (lower is better)
Translates to: CVLILFIEVPSAMERVGLLNRLF*RSMGLL
Trigger: CAAGAGCCCCATTGAGCGTCAGAAGAGCCTGTTGAG...CAGCCCAACCCTCTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp CCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGGTCGTGAGCACGTACACTaGCTTCAGGAGCAAGTAGCC +
Preference number: 4 (lower is better)
Translates to: PSVCAHPFHRSPIGHGEGREHVH*LQEQVA
Trigger: GGCTACTTGCTCCTGAAGTCAGTGTACGTGCTCACG...ACCCTCTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACACACTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp TATTTGTTACAGCACCTGACGCTACCTAATACAGGGTACTGCCTGCCACATACATGCTCTGCAGGGCCATaGGGGTGCAGGATGGCCCAG +
Preference number: 4 (lower is better)
Translates to: YLLQHLTLPNTGYCLPHTCSAGP*GCRMAQ
Trigger: CTGGGCCATCCTGCACCCTCATGGCCCTGCAGAGCA...TGTATGTGGCAGGCAGTACCCTGTATTAGGTAGCGTCAGGTGCTGTAACAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360890.6
CDS-3UTR TCA 90 bp TTACAGCACCTGACGCTACCTAATACAGGGTACTGCCTGCCACATACAGTGGCTTGTACTCCTCGGCGTTaGTGGCTGAGAGCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: LQHLTLPNTGYCLPHTVACTPRR*WLRAAP
Trigger: TGGAGCAGCTCTCAGCCATCAACGCCGAGGAGTACA...AGCCACTGTATGTGGCAGGCAGTACCCTGTATTAGGTAGCGTCAGGTGCTGTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360890.6
CDS-3UTR TCA 90 bp AGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCGATGGGAAAAGAGGCTaGGCTCCAGATTGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: SVLLSPPSVCAHPFHRSPDGKRG*APDCLQ
Trigger: CTGCAGACAATCTGGAGCTCAGCCTCTTTTCCCATC...GGGACTTCTATGAAAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp TGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGGTTGGGCTGAGGCCAGGATGCCAATaGTGGTGGAGATCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: CVLILFIEVPSAMERVGLRPGCQ*WWRSWR
Trigger: CCTCCAAGATCTCCACCATCATTGGCATCCTGGCCT...CAGCCCAACCCTCTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp TGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGGTTGGGCTGCCACCAGCTTCTGGGTaGAGCAGGAGATGTTGGCAA +
Preference number: 4 (lower is better)
Translates to: CVLILFIEVPSAMERVGLPPASG*SRRCWQ
Trigger: TTGCCAACATCTCCTGCTTCACCCAGAAGCTGGTGG...CAGCCCAACCCTCTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp GCTGTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGAAGGAGGCCCTGGGGGGTAACTTCTCTCATTaGGTAGCAAAAGGCAATGCA +
Preference number: 4 (lower is better)
Translates to: AVIARGPSLRTVGKEALGGNFSH*VAKGNA
Trigger: TGCATTGCCTTTTGCTACTCAATGAGAGAAGTTACC...CCCCAGGGCCTCCTTCCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCACAGC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp AGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCCAGAGAGATCGATCTTaGAGGCATCCTCCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: SVLLSPPSVCAHPFHRSPQRDRS*RHPPGS
Trigger: AGACCCTGGAGGATGCCTTCAAGATCGATCTCTCTG...GGGACTTCTATGAAAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp TGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGGTTGGGCTGCATCAGCTTCATGGCTaGGGACAGGCTTCCACTCCA +
Preference number: 4 (lower is better)
Translates to: CVLILFIEVPSAMERVGLHQLHG*GQASTP
Trigger: TGGAGTGGAAGCCTGTCCTCAGCCATGAAGCTGATG...CAGCCCAACCCTCTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp AAGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTCCGTGGGAGACAGTGTaGAGTTCTCGCAGATGTAGA +
Preference number: 4 (lower is better)
Translates to: KSQFPACCSALRVCVLILPWETV*SSRRCR
Trigger: TCTACATCTGCGAGAACTTCACACTGTCTCCCACGG...AAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp TGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGGTTGGGCTGGGTGGAGGTTGGCACTaGCAAAGTCACTTTCCAGGG +
Preference number: 4 (lower is better)
Translates to: CVLILFIEVPSAMERVGLGGGWH*QSHFPG
Trigger: CCCTGGAAAGTGACTTTGTCAGTGCCAACCTCCACC...CAGCCCAACCCTCTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp CCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGGTCCAGGGGCTGTCCATTaGCATTCCACAGGGACAAGT +
Preference number: 4 (lower is better)
Translates to: PSVCAHPFHRSPIGHGEGPGAVH*HSTGTS
Trigger: ACTTGTCCCTGTGGAATGTCAATGGACAGCCCCTGG...ACCCTCTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACACACTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR GCA 90 bp TTGTTACAGCACCTGACGCTACCTAATACAGGGTACTGCCTGCCACATACAGTGGTGGGGCTGGAGGACTaGCCTCCATGTGGGACATCA +
Preference number: 4 (lower is better)
Translates to: LLQHLTLPNTGYCLPHTVVGLED*PPCGTS
Trigger: TGATGTCCCACATGGAGGGCAGTCCTCCAGCCCCAC...CACTGTATGTGGCAGGCAGTACCCTGTATTAGGTAGCGTCAGGTGCTGTAACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360890.6
CDS-3UTR GCA 90 bp TTGTTACAGCACCTGACGCTACCTAATACAGGGTACTGCCTGCCACATACAGTGCAGCAACTGTCCAGCTaGCAACCGAGCTTGCTCCGC +
Preference number: 4 (lower is better)
Translates to: LLQHLTLPNTGYCLPHTVQQLSS*QPSLLR
Trigger: GCGGAGCAAGCTCGGTTGGCAGCTGGACAGTTGCTG...CACTGTATGTGGCAGGCAGTACCCTGTATTAGGTAGCGTCAGGTGCTGTAACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360890.6
CDS-3UTR GCA 90 bp TTGTTACAGCACCTGACGCTACCTAATACAGGGTACTGCCTGCCACATACAGTGCAGACTCAGCAACCCTaGCCAGCGTCTCCGAGTCTG +
Preference number: 4 (lower is better)
Translates to: LLQHLTLPNTGYCLPHTVQTQQP*PASPSL
Trigger: CAGACTCGGAGACGCTGGGCAGGGTTGCTGAGTCTG...CACTGTATGTGGCAGGCAGTACCCTGTATTAGGTAGCGTCAGGTGCTGTAACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360890.6
CDS-3UTR GCA 90 bp GGGTTGGGCTGCAGAGCTGTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGAACAGTCACCCCAGATaGCTCATGATGGAACTTGAA +
Preference number: 4 (lower is better)
Translates to: GLGCRAVIARGPSLRTVGNSHPR*LMMELE
Trigger: TTCAAGTTCCATCATGAGGCATCTGGGGTGACTGTT...CCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCACAGCTCTGCAGCCCAACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR GCA 90 bp AGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCCCCGGGATGCATGATTaGAGCATCTCCCTCATCCAT +
Preference number: 4 (lower is better)
Translates to: SVLLSPPSVCAHPFHRSPPGMHD*SISLIH
Trigger: ATGGATGAGGGAGATGCTGCAATCATGCATCCCGGG...GGGACTTCTATGAAAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR GCA 90 bp AGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTAAGCAAACAAAGGGTTaGTCAGTCCTGGCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: SHSFQRAAQPSECVCSSFKQTKG*SVLARW
Trigger: CCACCTGGCCAGGACTGAGCAACCCTTTGTTTGCTT...AAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR GCA 90 bp CCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGGTCTGGTCAGGACCGAGTaGAGAACTTTCACAGCCGCA +
Preference number: 4 (lower is better)
Translates to: PSVCAHPFHRSPIGHGEGLVRTE*RTFTAA
Trigger: TGCGGCTGTGAAAGTTCTGCACTCGGTCCTGACCAG...ACCCTCTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACACACTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR GCA 90 bp GGGTTGGGCTGCAGAGCTGTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGTACCCACAGATGTGTTaGATCAGGAAGTCACACATG +
Preference number: 4 (lower is better)
Translates to: GLGCRAVIARGPSLRTVGYPQMC*IRKSHM
Trigger: CATGTGTGACTTCCTGATGCAACACATCTGTGGGTA...CCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCACAGCTCTGCAGCCCAACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR GCA 90 bp GGGTTGGGCTGCAGAGCTGTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGAAATTGCAGAGGATGTaGTGGAAGACACCAGTGTTG +
Preference number: 4 (lower is better)
Translates to: GLGCRAVIARGPSLRTVGKLQRM*WKTPVL
Trigger: CAACACTGGTGTCTTCCAGCACATCCTCTGCAATTT...CCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCACAGCTCTGCAGCCCAACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR GCA 90 bp TGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGGTTGGGCTGCTTGGGTATAAGCTGTaGCTGGTGGGCAGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: CVLILFIEVPSAMERVGLLGYKL*LVGSFS
Trigger: GCTGAAGCTGCCCACCAGGCACAGCTTATACCCAAG...CAGCCCAACCCTCTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR GCA 90 bp CCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGGTCCAGGGCTCCGTCCATaGAGATCTGCCTCTCATTCA +
Preference number: 4 (lower is better)
Translates to: PSVCAHPFHRSPIGHGEGPGLRP*RSASHS
Trigger: TGAATGAGAGGCAGATCTGCATGGACGGAGCCCTGG...ACCCTCTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACACACTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR GCA 90 bp AGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTTCTGTGAGTGGTGTCTaGAGGAAGAAGGTGGAGACG +
Preference number: 4 (lower is better)
Translates to: SHSFQRAAQPSECVCSSFSVSGV*RKKVET
Trigger: CGTCTCCACCTTCTTCCTGCAGACACCACTCACAGA...AAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR GCA 90 bp AGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCGATATGCCTGGGGTCTaGCGAGAACATCCCACTGTA +
Preference number: 4 (lower is better)
Translates to: SVLLSPPSVCAHPFHRSPDMPGV*REHPTV
Trigger: TACAGTGGGATGTTCTCGGCAGACCCCAGGCATATC...GGGACTTCTATGAAAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR GCA 90 bp CCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGGTCATTCGGAGAGGGACTaGTGGGGCTTGGATAGGCAA +
Preference number: 4 (lower is better)
Translates to: PSVCAHPFHRSPIGHGEGHSERD*WGLDRQ
Trigger: TTGCCTATCCAAGCCCCAGCAGTCCCTCTCCGAATG...ACCCTCTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACACACTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR GCA 90 bp CCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGGTACATCCCAGTGCTCCTaGAGAAAGCCCAGGATGCTG +
Preference number: 4 (lower is better)
Translates to: PSVCAHPFHRSPIGHGEGTSQCS*RKPRML
Trigger: CAGCATCCTGGGCTTTCTGCAGGAGCACTGGGATGT...ACCCTCTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACACACTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR GCA 90 bp AAGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTAAGACAACATCCCAGTaGTCCTGCAGAAAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: KSQFPACCSALRVCVLILKTTSQ*SCRKPR
Trigger: CCTGGGCTTTCTGCAGGAGCACTGGGATGTTGTCTT...AAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR GCA 90 bp TGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGGTTGGGCTGGGCCCAGGCGTTGGCTaGCTTGATGTTGCCACATTT +
Preference number: 4 (lower is better)
Translates to: CVLILFIEVPSAMERVGLGPGVG*LDVATF
Trigger: AAATGTGGCAACATCAAGGCAGCCAACGCCTGGGCC...CAGCCCAACCCTCTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR GCA 90 bp CCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGGTTCTTGGCTTTCCTTGTaGCTTCCTGAGCTCAGGGCC +
Preference number: 4 (lower is better)
Translates to: PSVCAHPFHRSPIGHGEGSWLSL*LPELRA
Trigger: GGCCCTGAGCTCAGGAAGGCACAAGGAAAGCCAAGA...ACCCTCTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACACACTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR GCA 90 bp TGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGGTTGGGCTGTGGAGAGGGTTGGGCTaGAGAGCTGTGATTGCCAGA +
Preference number: 4 (lower is better)
Translates to: CVLILFIEVPSAMERVGLWRGLG*RAVIAR
Trigger: TCTGGCAATCACAGCTCTGCAGCCCAACCCTCTCCA...CAGCCCAACCCTCTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp TTGTTACAGCACCTGACGCTACCTAATACAGGGTACTGCCTGCCACATACAGTGGGACTGCCCTCCATGTaGGACATCAGGCTGCACAGC +
Preference number: 4 (lower is better)
Translates to: LLQHLTLPNTGYCLPHTVGLPSM*DIRLHS
Trigger: GCTGTGCAGCCTGATGTCCCACATGGAGGGCAGTCC...CACTGTATGTGGCAGGCAGTACCCTGTATTAGGTAGCGTCAGGTGCTGTAACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360890.6
CDS-3UTR CCA 90 bp CCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGGTAGTTGCTGGGCAAGCTaGTCAGACACGTCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: PSVCAHPFHRSPIGHGEGSCWAS*SDTSSA
Trigger: GGCTGAAGACGTGTCTGACCAGCTTGCCCAGCAACT...ACCCTCTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACACACTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp AGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTTTAGCACGCAGAAGGTaGGTTCCTTCCAGAAGCAGC +
Preference number: 4 (lower is better)
Translates to: SHSFQRAAQPSECVCSSFLARRR*VPSRSS
Trigger: GCTGCTTCTGGAAGGAACCCACCTTCTGCGTGCTAA...AAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp TGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGGTTGGGCTGCTACAAACTGCGAGATaGGCTGCAGGGTCCACTCCA +
Preference number: 4 (lower is better)
Translates to: CVLILFIEVPSAMERVGLLQTAR*AAGSTP
Trigger: TGGAGTGGACCCTGCAGCCCATCTCGCAGTTTGTAG...CAGCCCAACCCTCTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp TGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGGTTGGGCTGGCAGTAGTTGAATCCTaGGATTCCCCCAAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: CVLILFIEVPSAMERVGLAVVES*DSPKGC
Trigger: GCAGCCCTTGGGGGAATCCCAGGATTCAACTACTGC...CAGCCCAACCCTCTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp GGGTTGGGCTGCAGAGCTGTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGGTCCATCCAGACAGGTaGAAACTGTACAATGCCTTT +
Preference number: 4 (lower is better)
Translates to: GLGCRAVIARGPSLRTVGVHPDR*KLYNAF
Trigger: AAAGGCATTGTACAGTTTCCACCTGTCTGGATGGAC...CCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCACAGCTCTGCAGCCCAACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp CATCGGCCATGGAGAGGGTTGGGCTGCAGAGCTGTGATTGCCAGAGGCCCTTCCATCCACAAATGCGGATaGATCCATAGAAAGGAAAGG +
Preference number: 4 (lower is better)
Translates to: HRPWRGLGCRAVIARGPSIHKCG*IHRKER
Trigger: CCTTTCCTTTCTATGGATCCATCCGCATTTGTGGAT...GGAAGGGCCTCTGGCAATCACAGCTCTGCAGCCCAACCCTCTCCATGGCCGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp TGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGGTTGGGCTGCAGCAACAGCTCCAATaGTCCGCAGAGACCCTGACA +
Preference number: 4 (lower is better)
Translates to: CVLILFIEVPSAMERVGLQQQLQ*SAETLT
Trigger: TGTCAGGGTCTCTGCGGACCATTGGAGCTGTTGCTG...CAGCCCAACCCTCTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp AAGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTATAAGCTGTGCCTGGTaGGCAGCTTCAGCATTCCTG +
Preference number: 4 (lower is better)
Translates to: KSQFPACCSALRVCVLILISCAW*AASAFL
Trigger: CAGGAATGCTGAAGCTGCCCACCAGGCACAGCTTAT...AAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp GCCCTCCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGGGTATAAGCTGTGCCTaGTGGGCAGCTTCAGCATTC +
Preference number: 4 (lower is better)
Translates to: ALRVCVLILFIEVPSAMEGISCA*WAASAF
Trigger: GAATGCTGAAGCTGCCCACCAGGCACAGCTTATACC...CTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACACACTCGGAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp AGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCGGAGCCACTGAAGCATaGCATCAAGGCTGTCTTTGG +
Preference number: 4 (lower is better)
Translates to: SVLLSPPSVCAHPFHRSPGATEA*HQGCLW
Trigger: CCAAAGACAGCCTTGATGCCATGCTTCAGTGGCTCC...GGGACTTCTATGAAAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp CCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGGTAGCAGGACCTCGGACTaGAAGTCTCGCTTCTGTTGG +
Preference number: 4 (lower is better)
Translates to: PSVCAHPFHRSPIGHGEGSRTSD*KSRFCW
Trigger: CCAACAGAAGCGAGACTTCCAGTCCGAGGTCCTGCT...ACCCTCTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACACACTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp CATCGGCCATGGAGAGGGTTGGGCTGCAGAGCTGTGATTGCCAGAGGCCCTTCCCCTCCACTTGTCATGTaGAATAGTTCCATAGCAGAA +
Preference number: 4 (lower is better)
Translates to: HRPWRGLGCRAVIARGPSPPLVM*NSSIAE
Trigger: TTCTGCTATGGAACTATTCCACATGACAAGTGGAGG...GGAAGGGCCTCTGGCAATCACAGCTCTGCAGCCCAACCCTCTCCATGGCCGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp TGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGGTTGGGCTGAGAGGAGGATATGCCTaGGGTCTGCCGAGAACATCC +
Preference number: 4 (lower is better)
Translates to: CVLILFIEVPSAMERVGLRGGYA*GLPRTS
Trigger: GGATGTTCTCGGCAGACCCCAGGCATATCCTCCTCT...CAGCCCAACCCTCTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp AGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTCTTTCCCCTTCAGGCTaGGTTGGAAAGAGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: SHSFQRAAQPSECVCSSFLSPSG*VGKSRS
Trigger: GCTTCTGCTCTTTCCAACCCAGCCTGAAGGGGAAAG...AAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp GGGTTGGGCTGCAGAGCTGTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGATAAGGTCTATCCAATaGTGGAGGTTGGCACTGACA +
Preference number: 4 (lower is better)
Translates to: GLGCRAVIARGPSLRTVGIRSIQ*WRLALT
Trigger: TGTCAGTGCCAACCTCCACCATTGGATAGACCTTAT...CCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCACAGCTCTGCAGCCCAACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp CCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGGTAGACAATGTGGCCAATaGCCCCTTTGGGGGACTCTG +
Preference number: 4 (lower is better)
Translates to: PSVCAHPFHRSPIGHGEGRQCGQ*PLWGTL
Trigger: CAGAGTCCCCCAAAGGGGCCATTGGCCACATTGTCT...ACCCTCTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACACACTCGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp CCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGGTGTCACGTGGGTGAGGTaGTCCAGATCCCACAGGATA +
Preference number: 4 (lower is better)
Translates to: PSVCAHPFHRSPIGHGEGVTWVR*SRSHRI
Trigger: TATCCTGTGGGATCTGGACCACCTCACCCACGTGAC...ACCCTCTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACACACTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp GCCCTCCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGGTTTGGTGTGGTTTCTaGACACGGCCAGAGCAGTCA +
Preference number: 4 (lower is better)
Translates to: ALRVCVLILFIEVPSAMEVWCGF*TRPEQS
Trigger: TGACTGCTCTGGCCGTGTCCAGAAACCACACCAAAC...CTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACACACTCGGAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp AGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCACCAGGAGTTTGGTGTaGTTTCTGGACACGGCCAGA +
Preference number: 4 (lower is better)
Translates to: SVLLSPPSVCAHPFHRSPTRSLV*FLDTAR
Trigger: TCTGGCCGTGTCCAGAAACCACACCAAACTCCTGGT...GGGACTTCTATGAAAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp AGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCACCGAAGTAACACTTTaGGCAGCAGAGGATAGCCCT +
Preference number: 4 (lower is better)
Translates to: SVLLSPPSVCAHPFHRSPTEVTL*AAEDSP
Trigger: AGGGCTATCCTCTGCTGCTCAAAGTGTTACTTCGGT...GGGACTTCTATGAAAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp AAGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTACCCCAGATGCCTCATaGTGGAACTTGAAGCCTTCA +
Preference number: 4 (lower is better)
Translates to: KSQFPACCSALRVCVLILTPDAS*WNLKPS
Trigger: TGAAGGCTTCAAGTTCCATCATGAGGCATCTGGGGT...AAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp AGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTAGGACCTGGAAGGCCTaGAGATTCTTAACAGTCACC +
Preference number: 4 (lower is better)
Translates to: SHSFQRAAQPSECVCSSFRTWKA*RFLTVT
Trigger: GGTGACTGTTAAGAATCTTCAGGCCTTCCAGGTCCT...AAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp TTACAGCACCTGACGCTACCTAATACAGGGTACTGCCTGCCACATACAGTGGCTGCCCAGGGCTCTCCTTaGTCAGATGCTGTACCTTTC +
Preference number: 4 (lower is better)
Translates to: LQHLTLPNTGYCLPHTVAAQGSP*SDAVPF
Trigger: GAAAGGTACAGCATCTGATCAAGGAGAGCCCTGGGC...AGCCACTGTATGTGGCAGGCAGTACCCTGTATTAGGTAGCGTCAGGTGCTGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360890.6
CDS-3UTR TCA 90 bp GCCCTCCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGTCTCTTTCTGGATCCTaGACACCAGGAGTGGACACT +
Preference number: 4 (lower is better)
Translates to: ALRVCVLILFIEVPSAMESLSGS*TPGVDT
Trigger: AGTGTCCACTCCTGGTGTTCAGGATCCAGAAAGAGA...CTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACACACTCGGAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp ATTTATTTGTTACAGCACCTGACGCTACCTAATACAGGGTACTGCCTGCCACATGCTGCTCCAAGATGCTaGGCGAGGCCTCCCGGTAGC +
Preference number: 4 (lower is better)
Translates to: IYLLQHLTLPNTGYCLPHAAPRC*ARPPGS
Trigger: GCTACCGGGAGGCCTCGCTCAGCATCTTGGAGCAGC...ATGTGGCAGGCAGTACCCTGTATTAGGTAGCGTCAGGTGCTGTAACAAATAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360890.6
CDS-3UTR TCA 90 bp AGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTTCGGAAAGCTGTGGGTaGTCTTCATGGTACAACCGA +
Preference number: 4 (lower is better)
Translates to: SHSFQRAAQPSECVCSSFSESCG*SSWYNR
Trigger: TCGGTTGTACCATGAAGATCACCCACAGCTTTCCGA...AAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp GCTGTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGAAGGAGGCCCTGGGGTTGCCTCTGTGTGTGTaGGATGAATCAAGGATTTTT +
Preference number: 4 (lower is better)
Translates to: AVIARGPSLRTVGKEALGLPLCV*DESRIF
Trigger: AAAAATCCTTGATTCATCTCACACACACAGAGGCAA...CCCCAGGGCCTCCTTCCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCACAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp GCCCTCCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGCATCCTCAGGTTCCATaGCATCCAGAGGCTGAAACT +
Preference number: 4 (lower is better)
Translates to: ALRVCVLILFIEVPSAMEHPQVP*HPEAET
Trigger: AGTTTCAGCCTCTGGATGTCATGGAACCTGAGGATG...CTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACACACTCGGAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp GCCCTCCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGCACAGTGCCAGCCACTaGGAGGATCAGCTGAAAAAT +
Preference number: 4 (lower is better)
Translates to: ALRVCVLILFIEVPSAMEHSASH*EDQLKN
Trigger: ATTTTTCAGCTGATCCTCTCAGTGGCTGGCACTGTG...CTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACACACTCGGAGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp AGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTAGAAGGTGGAGACGATaGGGTAGACCTCTGGAATGT +
Preference number: 4 (lower is better)
Translates to: SHSFQRAAQPSECVCSSFRRWRR*GRPLEC
Trigger: ACATTCCAGAGGTCTACCTCATCGTCTCCACCTTCT...AAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp GCCCTCCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGACAGTGTCCCTTTaGGAAGAGGCAGTCTCAATG +
Preference number: 4 (lower is better)
Translates to: ALRVCVLILFIEVPSAMERTVSL*EEAVSM
Trigger: CATTGAGACTGCCTCTTCTCAAAGGGACACTGTCCT...CTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACACACTCGGAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp GCCCTCCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGGACACAGGAGGAAGCTaGTGTTGGAATTGTAGGTGG +
Preference number: 4 (lower is better)
Translates to: ALRVCVLILFIEVPSAMEDTGGS*CWNCRW
Trigger: CCACCTACAATTCCAACATCAGCTTCCTCCTGTGTC...CTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACACACTCGGAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp AGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTAGCCCCCATGGGCTTTaGAAGATCCCGGAAAATCTT +
Preference number: 4 (lower is better)
Translates to: SHSFQRAAQPSECVCSSFSPHGL*KIPENL
Trigger: AAGATTTTCCGGGATCTTTCAAAGCCCATGGGGGCT...AAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp TGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGGTTGGGCTGTTCCTTTCCTTGGTCTaGGCCCCCATGGGCTTTGAA +
Preference number: 4 (lower is better)
Translates to: CVLILFIEVPSAMERVGLFLSLV*APMGFE
Trigger: TTCAAAGCCCATGGGGGCTCAGACCAAGGAAAGGAA...CAGCCCAACCCTCTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR GCA 90 bp AGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTCTCATGATCTTGGCTTaGTTCCGAAGCTGTGCCAGT +
Preference number: 4 (lower is better)
Translates to: SHSFQRAAQPSECVCSSFLMILA*FRSCAS
Trigger: ACTGGCACAGCTTCGGAAGCAAGCCAAGATCATGAG...AAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR GCA 90 bp CCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGGTTTGATGGCTGAGAGCTaGTCCAAGATGCTGAGCGAG +
Preference number: 4 (lower is better)
Translates to: PSVCAHPFHRSPIGHGEGLMAES*SKMLSE
Trigger: CTCGCTCAGCATCTTGGAGCAGCTCTCAGCCATCAA...ACCCTCTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACACACTCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR GCA 90 bp AAGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTAGTGCCCAGCAAATCTaGAAATGGCCTGGCCTTTGT +
Preference number: 4 (lower is better)
Translates to: KSQFPACCSALRVCVLILSAQQI*KWPGLC
Trigger: ACAAAGGCCAGGCCATTTGCAGATTTGCTGGGCACT...AAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR GCA 90 bp TGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGGTTGGGCTGTGCGTTGGGGGTCACTaGCAGTTTCTCCCTTCTGAA +
Preference number: 4 (lower is better)
Translates to: CVLILFIEVPSAMERVGLCVGGH*QFLPSE
Trigger: TTCAGAAGGGAGAAACTGGCAGTGACCCCCAACGCA...CAGCCCAACCCTCTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR GCA 90 bp AAGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTTCCACCCAGGATCCTaGACACAGGCCATCTCTAAA +
Preference number: 4 (lower is better)
Translates to: KSQFPACCSALRVCVLILFHPGS*TQAISK
Trigger: TTTAGAGATGGCCTGTGTGCAGGATCCTGGGTGGAA...AAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR GCA 90 bp GGGTTGGGCTGCAGAGCTGTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGAAGAAGTCTTCTGAGTaGAGACTTTCGTGTAAGGCT +
Preference number: 4 (lower is better)
Translates to: GLGCRAVIARGPSLRTVGKKSSE*RLSCKA
Trigger: AGCCTTACACGAAAGTCTGCACTCAGAAGACTTCTT...CCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCACAGCTCTGCAGCCCAACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR GCA 90 bp AGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCTCCAGGGCCTTTCTGTaGAGGCTGATGAATTTCCGA +
Preference number: 4 (lower is better)
Translates to: SVLLSPPSVCAHPFHRSPSRAFL*RLMNFR
Trigger: TCGGAAATTCATCAGCCTGCACAGAAAGGCCCTGGA...GGGACTTCTATGAAAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp TTACAGCACCTGACGCTACCTAATACAGGGTACTGCCTGCCACATACAGTGGCTAGTTGCTGGGCAAGCTaGTCAGACACGTCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: LQHLTLPNTGYCLPHTVASCWAS*SDTSSA
Trigger: GGCTGAAGACGTGTCTGACCAGCTTGCCCAGCAACT...AGCCACTGTATGTGGCAGGCAGTACCCTGTATTAGGTAGCGTCAGGTGCTGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360890.6
CDS-3UTR CCA 90 bp AAGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTAGGGCCTCTAGAAGCTaGAAGAAGTGTTCCTGCACT +
Preference number: 4 (lower is better)
Translates to: KSQFPACCSALRVCVLILRASRS*KKCSCT
Trigger: AGTGCAGGAACACTTCTTCCAGCTTCTAGAGGCCCT...AAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp TTACAGCACCTGACGCTACCTAATACAGGGTACTGCCTGCCACATACAGTGGCTAAGGGCACCATGCCGTaGTCCTTCAGGACAACTGCA +
Preference number: 4 (lower is better)
Translates to: LQHLTLPNTGYCLPHTVAKGTMP*SFRTTA
Trigger: TGCAGTTGTCCTGAAGGACCACGGCATGGTGCCCTT...AGCCACTGTATGTGGCAGGCAGTACCCTGTATTAGGTAGCGTCAGGTGCTGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360890.6
CDS-3UTR CCA 90 bp AAGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTAATCTGCAAATGGCCTaGCCTTTGTGTCCACCCAAG +
Preference number: 4 (lower is better)
Translates to: KSQFPACCSALRVCVLILNLQMA*PLCPPK
Trigger: CTTGGGTGGACACAAAGGCCAGGCCATTTGCAGATT...AAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp GCCCTCCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGTGCTTGAAGTTGCGTTaGGGGTCACTGCCAGTTTCT +
Preference number: 4 (lower is better)
Translates to: ALRVCVLILFIEVPSAMECLKLR*GSLPVS
Trigger: AGAAACTGGCAGTGACCCCCAACGCAACTTCAAGCA...CTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACACACTCGGAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp GCTGTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGAAGGAGGCCCTGGGGTGGACATGCACAGCTTaGAAGTTACCACAATATCTT +
Preference number: 4 (lower is better)
Translates to: AVIARGPSLRTVGKEALGWTCTA*KLPQYL
Trigger: AAGATATTGTGGTAACTTCCAAGCTGTGCATGTCCA...CCCCAGGGCCTCCTTCCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp AAGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTGCAAGAACACGGGCATaGCATTGTCACGGGATGAAA +
Preference number: 4 (lower is better)
Translates to: KSQFPACCSALRVCVLILARTRA*HCHGMK
Trigger: TTTCATCCCGTGACAATGCCATGCCCGTGTTCTTGC...AAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp AAGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTCAGGAAGTCACACATaGCATTACTGGTCAGGACCG +
Preference number: 4 (lower is better)
Translates to: KSQFPACCSALRVCVLILSGSHT*HYWSGP
Trigger: CGGTCCTGACCAGTAATGCCATGTGTGACTTCCTGA...AAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp GCCCTCCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGGGAATGTGGACGTGGTaGGCCAGAAAGTCATTCAAG +
Preference number: 4 (lower is better)
Translates to: ALRVCVLILFIEVPSAMEGMWTW*ARKSFK
Trigger: CTTGAATGACTTTCTGGCCCACCACGTCCACATTCC...CTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACACACTCGGAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp GCTGTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGAAGGAGGCCCTGGGGTTTCACGTCTTCATTTaGGGAAAGGAAGACTTGATG +
Preference number: 4 (lower is better)
Translates to: AVIARGPSLRTVGKEALGFHVFI*GKEDLM
Trigger: CATCAAGTCTTCCTTTCCCCAAATGAAGACGTGAAA...CCCCAGGGCCTCCTTCCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp AGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCGTGCTCTTCACACTGTaGAACATTCTGTCTGCCACG +
Preference number: 4 (lower is better)
Translates to: SVLLSPPSVCAHPFHRSPVLFTL*NILSAT
Trigger: CGTGGCAGACAGAATGTTCCACAGTGTGAAGAGCAC...GGGACTTCTATGAAAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp AGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTCTACCCCGTTGCAGTTaGTTAAGAACTCAGGCAGGT +
Preference number: 4 (lower is better)
Translates to: SHSFQRAAQPSECVCSSFLPRCS*LRTQAG
Trigger: ACCTGCCTGAGTTCTTAACCAACTGCAACGGGGTAG...AAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp CCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGGTTGCTGCAGTCCTGGCTaGGTGAGGTTTGGTAAAGAG +
Preference number: 4 (lower is better)
Translates to: PSVCAHPFHRSPIGHGEGCCSPG*VRFGKE
Trigger: CTCTTTACCAAACCTCACCCAGCCAGGACTGCAGCA...ACCCTCTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACACACTCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp TGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGGTTGGGCTGTCAATGGGGCTCTTGTaGGTCAACTGCTGGTATTCC +
Preference number: 4 (lower is better)
Translates to: CVLILFIEVPSAMERVGLSMGLL*VNCWYS
Trigger: GGAATACCAGCAGTTGACTCACAAGAGCCCCATTGA...CAGCCCAACCCTCTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp CAGCACCTGACGCTACCTAATACAGGGTACTGCCTGCCACATACAGTGGCTAACTCAATGGGGCTCTTGTaGGTCAACTGCTGGTATTCC +
Preference number: 4 (lower is better)
Translates to: QHLTLPNTGYCLPHTVANSMGLL*VNCWYS
Trigger: GGAATACCAGCAGTTGACTCACAAGAGCCCCATTGA...GTTAGCCACTGTATGTGGCAGGCAGTACCCTGTATTAGGTAGCGTCAGGTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360890.6
CDS-3UTR TCA 90 bp AGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCCAAGCTGAGGGTAAGTaGTGCTGTCAAACACCTTCA +
Preference number: 4 (lower is better)
Translates to: SVLLSPPSVCAHPFHRSPQAEGK*CCQTPS
Trigger: TGAAGGTGTTTGACAGCATCACTTACCCTCAGCTTG...GGGACTTCTATGAAAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp CAGCACCTGACGCTACCTAATACAGGGTACTGCCTGCCACATACAGTGGCTAACTCTCTTTCTGGATCCTaGACACCAGGAGTGGACACT +
Preference number: 4 (lower is better)
Translates to: QHLTLPNTGYCLPHTVANSLSGS*TPGVDT
Trigger: AGTGTCCACTCCTGGTGTTCAGGATCCAGAAAGAGA...GTTAGCCACTGTATGTGGCAGGCAGTACCCTGTATTAGGTAGCGTCAGGTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360890.6
CDS-3UTR TCA 90 bp AGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTTCAGCATCACACAGGTaGGTTCTCTTTCTGGATCCT +
Preference number: 4 (lower is better)
Translates to: SHSFQRAAQPSECVCSSFSASHR*VLFLDP
Trigger: AGGATCCAGAAAGAGAACTCACCTGTGTGATGCTGA...AAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp TGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGGTTGGGCTGATAGAGCACCCACAATaGTGCTCATGTACTCCTCGG +
Preference number: 4 (lower is better)
Translates to: CVLILFIEVPSAMERVGLIEHPQ*CSCTPR
Trigger: CCGAGGAGTACATGAGCATCATTGTGGGTGCTCTAT...CAGCCCAACCCTCTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp CAGCACCTGACGCTACCTAATACAGGGTACTGCCTGCCACATACAGTGGCTAACATAGAGCACCCACAATaGTGCTCATGTACTCCTCGG +
Preference number: 4 (lower is better)
Translates to: QHLTLPNTGYCLPHTVANIEHPQ*CSCTPR
Trigger: CCGAGGAGTACATGAGCATCATTGTGGGTGCTCTAT...GTTAGCCACTGTATGTGGCAGGCAGTACCCTGTATTAGGTAGCGTCAGGTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360890.6
CDS-3UTR TCA 90 bp GGGTTGGGCTGCAGAGCTGTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGTTCCAGAGTTTCCATTaGAATGGCTTCTTCAAAGAG +
Preference number: 4 (lower is better)
Translates to: GLGCRAVIARGPSLRTVGFQSFH*NGFFKE
Trigger: CTCTTTGAAGAAGCCATTTCAATGGAAACTCTGGAA...CCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCACAGCTCTGCAGCCCAACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp AGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTGGCATTGTCACGGGATaGAATGTTCATCTCTTTGGC +
Preference number: 4 (lower is better)
Translates to: SHSFQRAAQPSECVCSSFGIVTG*NVHLFG
Trigger: GCCAAAGAGATGAACATTTCATCCCGTGACAATGCC...AAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp AGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCGGGTCCTTCCCTTGGTaGTTGAAGGATTTCCAAAAG +
Preference number: 4 (lower is better)
Translates to: SVLLSPPSVCAHPFHRSPGSFPW*LKDFQK
Trigger: CTTTTGGAAATCCTTCAATCACCAAGGGAAGGACCC...GGGACTTCTATGAAAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp GCCCTCCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGGGGAAGATATTACACTaGGCAGCATCTCCAGCAACT +
Preference number: 4 (lower is better)
Translates to: ALRVCVLILFIEVPSAMEGKILH*AASPAT
Trigger: AGTTGCTGGAGATGCTGCTCAGTGTAATATCTTCCC...CTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACACACTCGGAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR GCA 90 bp TTACAGCACCTGACGCTACCTAATACAGGGTACTGCCTGCCACATACAGTGGCTGATCTTCTGCCTCCATaGCGTGGCAAAGCAGATCTG +
Preference number: 4 (lower is better)
Translates to: LQHLTLPNTGYCLPHTVADLLPP*RGKADL
Trigger: CAGATCTGCTTTGCCACGGCATGGAGGCAGAAGATC...AGCCACTGTATGTGGCAGGCAGTACCCTGTATTAGGTAGCGTCAGGTGCTGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360890.6
CDS-3UTR GCA 90 bp CAGCACCTGACGCTACCTAATACAGGGTACTGCCTGCCACATACAGTGGCTAACATGATCTCTACAAACTaGGAGATGGGCTGCAGGGTC +
Preference number: 4 (lower is better)
Translates to: QHLTLPNTGYCLPHTVANMISTN*EMGCRV
Trigger: GACCCTGCAGCCCATCTCGCAGTTTGTAGAGATCAT...GTTAGCCACTGTATGTGGCAGGCAGTACCCTGTATTAGGTAGCGTCAGGTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360890.6
CDS-3UTR GCA 90 bp AAGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTCTCTCCTTGATCAGATaGTGTACCTTTCGCAGGATC +
Preference number: 4 (lower is better)
Translates to: KSQFPACCSALRVCVLILLSLIR*CTFRRI
Trigger: GATCCTGCGAAAGGTACAGCATCTGATCAAGGAGAG...AAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR GCA 90 bp GCCCTCCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGTGGAGGAAAAGGCAGTaGCCAGCAAATCTGCAAATG +
Preference number: 4 (lower is better)
Translates to: ALRVCVLILFIEVPSAMEWRKRQ*PANLQM
Trigger: CATTTGCAGATTTGCTGGGCACTGCCTTTTCCTCCA...CTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACACACTCGGAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR GCA 90 bp AGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCGAGCTCCAGATTGTCTaGAGTATTCATCCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: SVLLSPPSVCAHPFHRSPELQIV*SIHPEL
Trigger: GAGCTCTGGATGAATACTGCAGACAATCTGGAGCTC...GGGACTTCTATGAAAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR GCA 90 bp AAGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTCTGATGTCCCTTTTCTaGCACTTCTGCAGCATGATC +
Preference number: 4 (lower is better)
Translates to: KSQFPACCSALRVCVLILLMSLF*HFCSMI
Trigger: GATCATGCTGCAGAAGTGGCAGAAAAGGGACATCAG...AAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR GCA 90 bp AGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTCGAACTCTACCCCGTTaGAGTTGGTTAAGAACTCAG +
Preference number: 4 (lower is better)
Translates to: SHSFQRAAQPSECVCSSFRTLPR*SWLRTQ
Trigger: CTGAGTTCTTAACCAACTGCAACGGGGTAGAGTTCG...AAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR GCA 90 bp CAGCACCTGACGCTACCTAATACAGGGTACTGCCTGCCACATACAGTGGCTAACATGTGGATCGCTTGGTaGATATCCACAGGGAAGCCA +
Preference number: 4 (lower is better)
Translates to: QHLTLPNTGYCLPHTVANMWIAW*ISTGKP
Trigger: TGGCTTCCCTGTGGATATGCACCAAGCGATCCACAT...GTTAGCCACTGTATGTGGCAGGCAGTACCCTGTATTAGGTAGCGTCAGGTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360890.6
CDS-3UTR CCA 90 bp ATTTATTTGTTACAGCACCTGACGCTACCTAATACAGGGTACTGCCTGCCACATGCAGATCTGGAGGGGTaGCCGTCAGCGCCTGTAGAC +
Preference number: 4 (lower is better)
Translates to: IYLLQHLTLPNTGYCLPHADLEG*PSAPVD
Trigger: GTCTACAGGCGCTGACGGCCACCCCTCCAGATCTGC...ATGTGGCAGGCAGTACCCTGTATTAGGTAGCGTCAGGTGCTGTAACAAATAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360890.6
CDS-3UTR CCA 90 bp TGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGGTTGGGCTGATGATGCTGAGGTTCTaGGCCTTGGAGATTGCCCTT +
Preference number: 4 (lower is better)
Translates to: CVLILFIEVPSAMERVGLMMLRF*ALEIAL
Trigger: AAGGGCAATCTCCAAGGCCCAGAACCTCAGCATCAT...CAGCCCAACCCTCTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp TATTTGTTACAGCACCTGACGCTACCTAATACAGGGTACTGCCTGCCACATACAGAAGTGTTCCTGCACTaGGGCCGGCTTCAGGGGCAT +
Preference number: 4 (lower is better)
Translates to: YLLQHLTLPNTGYCLPHTEVFLH*GRLQGH
Trigger: ATGCCCCTGAAGCCGGCCCCAGTGCAGGAACACTTC...TGTATGTGGCAGGCAGTACCCTGTATTAGGTAGCGTCAGGTGCTGTAACAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360890.6
CDS-3UTR CCA 90 bp AGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCCCTGAACACCAGGAGTaGACACTTTGTTTCCTGACT +
Preference number: 4 (lower is better)
Translates to: SVLLSPPSVCAHPFHRSPPEHQE*TLCFLT
Trigger: AGTCAGGAAACAAAGTGTCCACTCCTGGTGTTCAGG...GGGACTTCTATGAAAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp TTGTTACAGCACCTGACGCTACCTAATACAGGGTACTGCCTGCCACATACAGTGGCAGCTCCCCTTGAGTaGATGAGCATAGAGCACCCA +
Preference number: 4 (lower is better)
Translates to: LLQHLTLPNTGYCLPHTVAAPLE*MSIEHP
Trigger: TGGGTGCTCTATGCTCATCCACTCAAGGGGAGCTGC...CACTGTATGTGGCAGGCAGTACCCTGTATTAGGTAGCGTCAGGTGCTGTAACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360890.6
CDS-3UTR CCA 90 bp AGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCCTCCTCGGAAAGCTGTaGGTGATCTTCATGGTACAA +
Preference number: 4 (lower is better)
Translates to: SVLLSPPSVCAHPFHRSPLLGKL*VIFMVQ
Trigger: TTGTACCATGAAGATCACCCACAGCTTTCCGAGGAG...GGGACTTCTATGAAAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp TGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGGTTGGGCTGGGCCCTGGTAGAGCCTaGATGTATAACATCTTGGCA +
Preference number: 4 (lower is better)
Translates to: CVLILFIEVPSAMERVGLGPGRA*MYNILA
Trigger: TGCCAAGATGTTATACATCCAGGCTCTACCAGGGCC...CAGCCCAACCCTCTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp AGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCCTTCAAAGAGGTATGTaGGGCCAAGACGCCAGATTA +
Preference number: 4 (lower is better)
Translates to: SVLLSPPSVCAHPFHRSPLQRGM*GQDARL
Trigger: TAATCTGGCGTCTTGGCCCCACATACCTCTTTGAAG...GGGACTTCTATGAAAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp AGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTAAATGTTCATCTCTTTaGCGATCAGGCGGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: SHSFQRAAQPSECVCSSFKCSSL*RSGGCP
Trigger: TGGACAGCCGCCTGATCGCCAAAGAGATGAACATTT...AAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp GCCCTCCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGTCACAGCCGCATACATaGTATGGTCATCTGTCGCTA +
Preference number: 4 (lower is better)
Translates to: ALRVCVLILFIEVPSAMESQPHT*YGHLSL
Trigger: TAGCGACAGATGACCATACCATGTATGCGGCTGTGA...CTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACACACTCGGAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp TGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGGTTGGGCTGCACACATGGCATTACTaGTCAGGACCGAGTGCAGAA +
Preference number: 4 (lower is better)
Translates to: CVLILFIEVPSAMERVGLHTWHY*SGPSAE
Trigger: TTCTGCACTCGGTCCTGACCAGTAATGCCATGTGTG...CAGCCCAACCCTCTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp TGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGGTTGGGCTGTTGCAGAGGATGTGCTaGAAGACACCAGTGTTGGTG +
Preference number: 4 (lower is better)
Translates to: CVLILFIEVPSAMERVGLLQRMC*KTPVLV
Trigger: CACCAACACTGGTGTCTTCCAGCACATCCTCTGCAA...CAGCCCAACCCTCTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp AGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTAGCATCTCCAGCAACTaGTTTCTGAGCCAGATTGTC +
Preference number: 4 (lower is better)
Translates to: SHSFQRAAQPSECVCSSFSISSN*FLSQIV
Trigger: GACAATCTGGCTCAGAAACCAGTTGCTGGAGATGCT...AAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp GGGTTGGGCTGCAGAGCTGTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGTTCTGGATGTTGTGTTaGACATCACTCAAACTTGGT +
Preference number: 4 (lower is better)
Translates to: GLGCRAVIARGPSLRTVGFWMLC*TSLKLG
Trigger: ACCAAGTTTGAGTGATGTCCAACACAACATCCAGAA...CCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCACAGCTCTGCAGCCCAACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp TGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGGTTGGGCTGGACCCAGGGGAACACTaGGTACTGCATGTAGTCATT +
Preference number: 4 (lower is better)
Translates to: CVLILFIEVPSAMERVGLDPGEH*VLHVVI
Trigger: AATGACTACATGCAGTACCCAGTGTTCCCCTGGGTC...CAGCCCAACCCTCTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp AGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCAGGTCTATCCAATGGTaGAGGTTGGCACTGACAAAG +
Preference number: 4 (lower is better)
Translates to: SVLLSPPSVCAHPFHRSPRSIQW*RLALTK
Trigger: CTTTGTCAGTGCCAACCTCCACCATTGGATAGACCT...GGGACTTCTATGAAAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp AGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTAATTTCGTGTGCAGCTaGGCATCACCAAGTCACAGT +
Preference number: 4 (lower is better)
Translates to: SHSFQRAAQPSECVCSSFNFVCS*ASPSHS
Trigger: ACTGTGACTTGGTGATGCCCAGCTGCACACGAAATT...AAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000490507.1
CDS-3UTR TCA 90 bp ATTTATTTGTTACAGCACCTGACGCTACCTAATACAGGGTACTGCCTGCCACATCAGGGAGAGTGTCCGTaGGCCTGGAGAGGTTCTGGA +
Preference number: 4 (lower is better)
Translates to: IYLLQHLTLPNTGYCLPHQGECP*AWRGSG
Trigger: TCCAGAACCTCTCCAGGCTCACGGACACTCTCCCTG...ATGTGGCAGGCAGTACCCTGTATTAGGTAGCGTCAGGTGCTGTAACAAATAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360890.6
CDS-3UTR TCA 90 bp CAGCACCTGACGCTACCTAATACAGGGTACTGCCTGCCACATACAGTGGCTAACCAGAGGATAGCCCTCTaGATTCTCAAACTCCAGGAA +
Preference number: 4 (lower is better)
Translates to: QHLTLPNTGYCLPHTVANQRIAL*ILKLQE
Trigger: TTCCTGGAGTTTGAGAATTCAGAGGGCTATCCTCTG...GTTAGCCACTGTATGTGGCAGGCAGTACCCTGTATTAGGTAGCGTCAGGTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360890.6
CDS-3UTR TCA 90 bp TTACAGCACCTGACGCTACCTAATACAGGGTACTGCCTGCCACATACAGTGGCTCCTCATGATGGAACTTaGAGCCTTCAAGCTGAGGGT +
Preference number: 4 (lower is better)
Translates to: LQHLTLPNTGYCLPHTVAPHDGT*SLQAEG
Trigger: ACCCTCAGCTTGAAGGCTTCAAGTTCCATCATGAGG...AGCCACTGTATGTGGCAGGCAGTACCCTGTATTAGGTAGCGTCAGGTGCTGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360890.6
CDS-3UTR TCA 90 bp TATTTGTTACAGCACCTGACGCTACCTAATACAGGGTACTGCCTGCCACATACACTCGGCGTTGATGGCTaGGAGCTGCTCCAAGATGCT +
Preference number: 4 (lower is better)
Translates to: YLLQHLTLPNTGYCLPHTLGVDG*ELLQDA
Trigger: AGCATCTTGGAGCAGCTCTCAGCCATCAACGCCGAG...TGTATGTGGCAGGCAGTACCCTGTATTAGGTAGCGTCAGGTGCTGTAACAAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360890.6
CDS-3UTR TCA 90 bp AGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTATGACATCCAGAGGCTaGAACTCCTTCTCTTCTGTA +
Preference number: 4 (lower is better)
Translates to: SHSFQRAAQPSECVCSSFMTSRG*NSFSSV
Trigger: TACAGAAGAGAAGGAGTTTCAGCCTCTGGATGTCAT...AAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp TGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGGTTGGGCTGTTCCACTCCACAAAGTaGCTTTGCTGTGGTGTGCAA +
Preference number: 4 (lower is better)
Translates to: CVLILFIEVPSAMERVGLFHSTK*LCCGVQ
Trigger: TTGCACACCACAGCAAAGTCACTTTGTGGAGTGGAA...CAGCCCAACCCTCTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR GCA 90 bp ATTTATTTGTTACAGCACCTGACGCTACCTAATACAGGGTACTGCCTGCCACATAGGAGCTCCTCCAGATaGGGGTCCACTTCGCTCTGG +
Preference number: 4 (lower is better)
Translates to: IYLLQHLTLPNTGYCLPHRSSSR*GSTSLW
Trigger: CCAGAGCGAAGTGGACCCGCATCTGGAGGAGCTCCT...ATGTGGCAGGCAGTACCCTGTATTAGGTAGCGTCAGGTGCTGTAACAAATAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360890.6
CDS-3UTR GCA 90 bp CCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGGTCTGACAAGACTTGTATaGAGAGGACAGAGTCACTGG +
Preference number: 4 (lower is better)
Translates to: PSVCAHPFHRSPIGHGEGLTRLV*RGQSHW
Trigger: CCAGTGACTCTGTCCTCTGCATACAAGTCTTGTCAG...ACCCTCTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACACACTCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR GCA 90 bp ATTTATTTGTTACAGCACCTGACGCTACCTAATACAGGGTACTGCCTGCCACATAACTGCGAGATGGGCTaGAGGGTCCACTCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: IYLLQHLTLPNTGYCLPHNCEMG*RVHSSR
Trigger: CCTGCTGGAGTGGACCCTGCAGCCCATCTCGCAGTT...ATGTGGCAGGCAGTACCCTGTATTAGGTAGCGTCAGGTGCTGTAACAAATAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360890.6
CDS-3UTR GCA 90 bp TATTTGTTACAGCACCTGACGCTACCTAATACAGGGTACTGCCTGCCACATACATGGAAGAAGTGTTCCTaGACTGGGGCCGGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: YLLQHLTLPNTGYCLPHTWKKCS*TGAGFR
Trigger: CCTGAAGCCGGCCCCAGTGCAGGAACACTTCTTCCA...TGTATGTGGCAGGCAGTACCCTGTATTAGGTAGCGTCAGGTGCTGTAACAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360890.6
CDS-3UTR GCA 90 bp AGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCATGTGTAATTTCGTGTaGAGCTGGGCATCACCAAGT +
Preference number: 4 (lower is better)
Translates to: SVLLSPPSVCAHPFHRSPMCNFV*SWASPS
Trigger: ACTTGGTGATGCCCAGCTGCACACGAAATTACACAT...GGGACTTCTATGAAAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR GCA 90 bp AAGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTATGTGTAATTTCGTGTaGAGCTGGGCATCACCAAGT +
Preference number: 4 (lower is better)
Translates to: KSQFPACCSALRVCVLILMCNFV*SWASPS
Trigger: ACTTGGTGATGCCCAGCTGCACACGAAATTACACAT...AAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000490507.1
CDS-3UTR CCA 90 bp CCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGGTTCTTCTGACGCTCAATaGGGCTCTTGTGAGTCAACT +
Preference number: 4 (lower is better)
Translates to: PSVCAHPFHRSPIGHGEGSSDAQ*GSCEST
Trigger: AGTTGACTCACAAGAGCCCCATTGAGCGTCAGAAGA...ACCCTCTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACACACTCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp CAGCACCTGACGCTACCTAATACAGGGTACTGCCTGCCACATACAGTGGCTAACTCTTCTGACGCTCAATaGGGCTCTTGTGAGTCAACT +
Preference number: 4 (lower is better)
Translates to: QHLTLPNTGYCLPHTVANSSDAQ*GSCEST
Trigger: AGTTGACTCACAAGAGCCCCATTGAGCGTCAGAAGA...GTTAGCCACTGTATGTGGCAGGCAGTACCCTGTATTAGGTAGCGTCAGGTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360890.6
CDS-3UTR CCA 90 bp TATTTGTTACAGCACCTGACGCTACCTAATACAGGGTACTGCCTGCCACATACAGCCTTCTGGAGTTGCTaGGCAAGCTGGTCAGACACG +
Preference number: 4 (lower is better)
Translates to: YLLQHLTLPNTGYCLPHTAFWSC*ASWSDT
Trigger: CGTGTCTGACCAGCTTGCCCAGCAACTCCAGAAGGC...TGTATGTGGCAGGCAGTACCCTGTATTAGGTAGCGTCAGGTGCTGTAACAAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360890.6
CDS-3UTR CCA 90 bp TATTTGTTACAGCACCTGACGCTACCTAATACAGGGTACTGCCTGCCACATACAAGCCTGGAGAGGTTCTaGAGGGAGAGCCTGACACAG +
Preference number: 4 (lower is better)
Translates to: YLLQHLTLPNTGYCLPHTSLERF*RESLTQ
Trigger: CTGTGTCAGGCTCTCCCTCCAGAACCTCTCCAGGCT...TGTATGTGGCAGGCAGTACCCTGTATTAGGTAGCGTCAGGTGCTGTAACAAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360890.6
CDS-3UTR CCA 90 bp TATTTGTTACAGCACCTGACGCTACCTAATACAGGGTACTGCCTGCCACATACACATGAGGGTGCAGGATaGCCCAGGGCTCTCCTTGAT +
Preference number: 4 (lower is better)
Translates to: YLLQHLTLPNTGYCLPHTHEGAG*PRALLD
Trigger: ATCAAGGAGAGCCCTGGGCCATCCTGCACCCTCATG...TGTATGTGGCAGGCAGTACCCTGTATTAGGTAGCGTCAGGTGCTGTAACAAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360890.6
CDS-3UTR CCA 90 bp GCTGTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGAAGGAGGCCCTGGGGGTTACCACAATATCTTaGGCCAAGTTTGTTAATAAC +
Preference number: 4 (lower is better)
Translates to: AVIARGPSLRTVGKEALGVTTIS*AKFVNN
Trigger: GTTATTAACAAACTTGGCCCAAGATATTGTGGTAAC...CCCCAGGGCCTCCTTCCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCACAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp CAGCACCTGACGCTACCTAATACAGGGTACTGCCTGCCACATACAGTGGCTAACATGCCTGAGCAAATGTaGATCGCTTGGTGCATATCC +
Preference number: 4 (lower is better)
Translates to: QHLTLPNTGYCLPHTVANMPEQM*IAWCIS
Trigger: GGATATGCACCAAGCGATCCACATTTGCTCAGGCAT...GTTAGCCACTGTATGTGGCAGGCAGTACCCTGTATTAGGTAGCGTCAGGTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360890.6
CDS-3UTR TCA 90 bp TATTTGTTACAGCACCTGACGCTACCTAATACAGGGTACTGCCTGCCACATACACGTGAGCACGTACACTaGCTTCAGGAGCAAGTAGCC +
Preference number: 4 (lower is better)
Translates to: YLLQHLTLPNTGYCLPHTREHVH*LQEQVA
Trigger: GGCTACTTGCTCCTGAAGTCAGTGTACGTGCTCACG...TGTATGTGGCAGGCAGTACCCTGTATTAGGTAGCGTCAGGTGCTGTAACAAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360890.6
CDS-3UTR TCA 90 bp AAGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTAGTCACTGCAAATATTaGGCAACATCTGCACGAACA +
Preference number: 4 (lower is better)
Translates to: KSQFPACCSALRVCVLILSHCKY*ATSART
Trigger: TGTTCGTGCAGATGTTGCTCAATATTTGCAGTGACT...AAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp TTGTTACAGCACCTGACGCTACCTAATACAGGGTACTGCCTGCCACATACAGTGACCCCAGATGCCTCATaGTGGAACTTGAAGCCTTCA +
Preference number: 4 (lower is better)
Translates to: LLQHLTLPNTGYCLPHTVTPDAS*WNLKPS
Trigger: TGAAGGCTTCAAGTTCCATCATGAGGCATCTGGGGT...CACTGTATGTGGCAGGCAGTACCCTGTATTAGGTAGCGTCAGGTGCTGTAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360890.6
CDS-3UTR TCA 90 bp TATTTGTTACAGCACCTGACGCTACCTAATACAGGGTACTGCCTGCCACATACACCGGCTTCAGGGGCATaGTCTCTACAAACTGCGAGA +
Preference number: 4 (lower is better)
Translates to: YLLQHLTLPNTGYCLPHTPASGA*SLQTAR
Trigger: TCTCGCAGTTTGTAGAGATCATGCCCCTGAAGCCGG...TGTATGTGGCAGGCAGTACCCTGTATTAGGTAGCGTCAGGTGCTGTAACAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360890.6
CDS-3UTR TCA 90 bp TTACAGCACCTGACGCTACCTAATACAGGGTACTGCCTGCCACATACAGTGGCTTCAGCATCACACAGGTaGGTTCTCTTTCTGGATCCT +
Preference number: 4 (lower is better)
Translates to: LQHLTLPNTGYCLPHTVASASHR*VLFLDP
Trigger: AGGATCCAGAAAGAGAACTCACCTGTGTGATGCTGA...AGCCACTGTATGTGGCAGGCAGTACCCTGTATTAGGTAGCGTCAGGTGCTGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360890.6
CDS-3UTR GCA 90 bp TTACAGCACCTGACGCTACCTAATACAGGGTACTGCCTGCCACATACAGTGGCTCTGACAAGACTTGTATaGAGAGGACAGAGTCACTGG +
Preference number: 4 (lower is better)
Translates to: LQHLTLPNTGYCLPHTVALTRLV*RGQSHW
Trigger: CCAGTGACTCTGTCCTCTGCATACAAGTCTTGTCAG...AGCCACTGTATGTGGCAGGCAGTACCCTGTATTAGGTAGCGTCAGGTGCTGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360890.6
CDS-3UTR GCA 90 bp TTACAGCACCTGACGCTACCTAATACAGGGTACTGCCTGCCACATACAGTGGCTCTCTCCTTGATCAGATaGTGTACCTTTCGCAGGATC +
Preference number: 4 (lower is better)
Translates to: LQHLTLPNTGYCLPHTVALSLIR*CTFRRI
Trigger: GATCCTGCGAAAGGTACAGCATCTGATCAAGGAGAG...AGCCACTGTATGTGGCAGGCAGTACCCTGTATTAGGTAGCGTCAGGTGCTGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360890.6
CDS-3UTR GCA 90 bp CCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGGTAGAAACTCTTTCTTCTaGAACAAAGGGCGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: PSVCAHPFHRSPIGHGEGRNSFF*NKGRGF
Trigger: GAAGCCACGCCCTTTGTTGCAGAAGAAAGAGTTTCT...ACCCTCTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACACACTCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp ATTTATTTGTTACAGCACCTGACGCTACCTAATACAGGGTACTGCCTGCCACATCCCGAAGGCAGGTCGTaGCAATCAGCAGAGACTGCA +
Preference number: 4 (lower is better)
Translates to: IYLLQHLTLPNTGYCLPHPEGRS*QSAETA
Trigger: TGCAGTCTCTGCTGATTGCCACGACCTGCCTTCGGG...ATGTGGCAGGCAGTACCCTGTATTAGGTAGCGTCAGGTGCTGTAACAAATAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360890.6
CDS-3UTR CCA 90 bp TTGTTACAGCACCTGACGCTACCTAATACAGGGTACTGCCTGCCACATACAGTGATGATGCTGAGGTTCTaGGCCTTGGAGATTGCCCTT +
Preference number: 4 (lower is better)
Translates to: LLQHLTLPNTGYCLPHTVMMLRF*ALEIAL
Trigger: AAGGGCAATCTCCAAGGCCCAGAACCTCAGCATCAT...CACTGTATGTGGCAGGCAGTACCCTGTATTAGGTAGCGTCAGGTGCTGTAACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360890.6
CDS-3UTR CCA 90 bp ATTTATTTGTTACAGCACCTGACGCTACCTAATACAGGGTACTGCCTGCCACATGGGTCCACTTCGCTCTaGGTCAGCCCATCATACCGA +
Preference number: 4 (lower is better)
Translates to: IYLLQHLTLPNTGYCLPHGSTSL*VSPSYR
Trigger: TCGGTATGATGGGCTGACCCAGAGCGAAGTGGACCC...ATGTGGCAGGCAGTACCCTGTATTAGGTAGCGTCAGGTGCTGTAACAAATAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360890.6
CDS-3UTR CCA 90 bp TGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGGTTGGGCTGGAGTCACTGGCTTTGTaGAAAACATTCTGTAGGACC +
Preference number: 4 (lower is better)
Translates to: CVLILFIEVPSAMERVGLESLAL*KTFCRT
Trigger: GGTCCTACAGAATGTTTTCCACAAAGCCAGTGACTC...CAGCCCAACCCTCTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp CAGCACCTGACGCTACCTAATACAGGGTACTGCCTGCCACATACAGTGGCTAACGAGTCACTGGCTTTGTaGAAAACATTCTGTAGGACC +
Preference number: 4 (lower is better)
Translates to: QHLTLPNTGYCLPHTVANESLAL*KTFCRT
Trigger: GGTCCTACAGAATGTTTTCCACAAAGCCAGTGACTC...GTTAGCCACTGTATGTGGCAGGCAGTACCCTGTATTAGGTAGCGTCAGGTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360890.6
CDS-3UTR CCA 90 bp TGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGGTTGGGCTGCAAGGATTTTTGTTGTaGCCGACAGAGATGAGGGAA +
Preference number: 4 (lower is better)
Translates to: CVLILFIEVPSAMERVGLQGFLL*PTEMRE
Trigger: TTCCCTCATCTCTGTCGGCCACAACAAAAATCCTTG...CAGCCCAACCCTCTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp TTACAGCACCTGACGCTACCTAATACAGGGTACTGCCTGCCACATACAGTGGCTCAAATGTGGATCGCTTaGTGCATATCCACAGGGAAG +
Preference number: 4 (lower is better)
Translates to: LQHLTLPNTGYCLPHTVAQMWIA*CISTGK
Trigger: CTTCCCTGTGGATATGCACCAAGCGATCCACATTTG...AGCCACTGTATGTGGCAGGCAGTACCCTGTATTAGGTAGCGTCAGGTGCTGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360890.6
CDS-3UTR TCA 90 bp ATTTATTTGTTACAGCACCTGACGCTACCTAATACAGGGTACTGCCTGCCACATCTCAACAGGCTCTTCTaGCGCTCAATGGGGCTCTTG +
Preference number: 4 (lower is better)
Translates to: IYLLQHLTLPNTGYCLPHLNRLF*RSMGLL
Trigger: CAAGAGCCCCATTGAGCGTCAGAAGAGCCTGTTGAG...ATGTGGCAGGCAGTACCCTGTATTAGGTAGCGTCAGGTGCTGTAACAAATAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360890.6
CDS-3UTR TCA 90 bp TTGTTACAGCACCTGACGCTACCTAATACAGGGTACTGCCTGCCACATACAGTGGGACACTTTGTTTCCTaGCTTCCTCATGATCTTGGC +
Preference number: 4 (lower is better)
Translates to: LLQHLTLPNTGYCLPHTVGHFVS*LPHDLG
Trigger: GCCAAGATCATGAGGAAGTCAGGAAACAAAGTGTCC...CACTGTATGTGGCAGGCAGTACCCTGTATTAGGTAGCGTCAGGTGCTGTAACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360890.6
CDS-3UTR TCA 90 bp ATTTATTTGTTACAGCACCTGACGCTACCTAATACAGGGTACTGCCTGCCACATAGCTGCAGCTCCCCTTaGGTGGATGAGCATAGAGCA +
Preference number: 4 (lower is better)
Translates to: IYLLQHLTLPNTGYCLPHSCSSP*VDEHRA
Trigger: TGCTCTATGCTCATCCACTCAAGGGGAGCTGCAGCT...ATGTGGCAGGCAGTACCCTGTATTAGGTAGCGTCAGGTGCTGTAACAAATAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360890.6
CDS-3UTR GCA 90 bp TTACAGCACCTGACGCTACCTAATACAGGGTACTGCCTGCCACATACAGTGGCTAACAGTCACCCCAGATaGCTCATGATGGAACTTGAA +
Preference number: 4 (lower is better)
Translates to: LQHLTLPNTGYCLPHTVANSHPR*LMMELE
Trigger: TTCAAGTTCCATCATGAGGCATCTGGGGTGACTGTT...AGCCACTGTATGTGGCAGGCAGTACCCTGTATTAGGTAGCGTCAGGTGCTGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360890.6
CDS-3UTR CCA 90 bp ATTTATTTGTTACAGCACCTGACGCTACCTAATACAGGGTACTGCCTGCCACATCTACAAACTGCGAGATaGGCTGCAGGGTCCACTCCA +
Preference number: 4 (lower is better)
Translates to: IYLLQHLTLPNTGYCLPHLQTAR*AAGSTP
Trigger: TGGAGTGGACCCTGCAGCCCATCTCGCAGTTTGTAG...ATGTGGCAGGCAGTACCCTGTATTAGGTAGCGTCAGGTGCTGTAACAAATAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360890.6
CDS-3UTR CCA 90 bp AAGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTAACTGTGGACAGGGTTaGAATAAACAAACAGCCATA +
Preference number: 4 (lower is better)
Translates to: KSQFPACCSALRVCVLILNCGQG*NKQTAI
Trigger: TATGGCTGTTTGTTTATTCCAACCCTGTCCACAGTT...AAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp TTACAGCACCTGACGCTACCTAATACAGGGTACTGCCTGCCACATACAGTGGCTAGTCACTGCAAATATTaGGCAACATCTGCACGAACA +
Preference number: 4 (lower is better)
Translates to: LQHLTLPNTGYCLPHTVASHCKY*ATSART
Trigger: TGTTCGTGCAGATGTTGCTCAATATTTGCAGTGACT...AGCCACTGTATGTGGCAGGCAGTACCCTGTATTAGGTAGCGTCAGGTGCTGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360890.6
CDS-3UTR TCA 90 bp ATTTATTTGTTACAGCACCTGACGCTACCTAATACAGGGTACTGCCTGCCACATAAACACCTTCAGCTCTaGCCTCCCACAGGTTGTCAG +
Preference number: 4 (lower is better)
Translates to: IYLLQHLTLPNTGYCLPHKHLQL*PPTGCQ
Trigger: CTGACAACCTGTGGGAGGTCAGAGCTGAAGGTGTTT...ATGTGGCAGGCAGTACCCTGTATTAGGTAGCGTCAGGTGCTGTAACAAATAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360890.6
CDS-3UTR TCA 90 bp TTGTTACAGCACCTGACGCTACCTAATACAGGGTACTGCCTGCCACATACAGTGAGCCTTTCAGAAGTGTaGCTACAATCCTCAGCATCA +
Preference number: 4 (lower is better)
Translates to: LLQHLTLPNTGYCLPHTVSLSEV*LQSSAS
Trigger: TGATGCTGAGGATTGTAGTCACACTTCTGAAAGGCT...CACTGTATGTGGCAGGCAGTACCCTGTATTAGGTAGCGTCAGGTGCTGTAACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360890.6
CDS-3UTR TCA 90 bp AAGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTCTGTGTGTGTGAGATaGATCAAGGATTTTTGTTGT +
Preference number: 4 (lower is better)
Translates to: KSQFPACCSALRVCVLILSVCVR*IKDFCC
Trigger: ACAACAAAAATCCTTGATTCATCTCACACACACAGA...AAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp AGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCGTAGTTCTCTATACATaGCACAAAATCCTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: SVLLSPPSVCAHPFHRSPVVLYT*HKILCL
Trigger: AAGACAGAGGATTTTGTGTCATGTATAGAGAACTAC...GGGACTTCTATGAAAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR GCA 90 bp TATTTGTTACAGCACCTGACGCTACCTAATACAGGGTACTGCCTGCCACATACACTCATGATCTTGGCTTaGTTCCGAAGCTGTGCCAGT +
Preference number: 4 (lower is better)
Translates to: YLLQHLTLPNTGYCLPHTLMILA*FRSCAS
Trigger: ACTGGCACAGCTTCGGAAGCAAGCCAAGATCATGAG...TGTATGTGGCAGGCAGTACCCTGTATTAGGTAGCGTCAGGTGCTGTAACAAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360890.6
CDS-3UTR GCA 90 bp ATTTATTTGTTACAGCACCTGACGCTACCTAATACAGGGTACTGCCTGCCACATTTGATGGCTGAGAGCTaGTCCAAGATGCTGAGCGAG +
Preference number: 4 (lower is better)
Translates to: IYLLQHLTLPNTGYCLPHLMAES*SKMLSE
Trigger: CTCGCTCAGCATCTTGGAGCAGCTCTCAGCCATCAA...ATGTGGCAGGCAGTACCCTGTATTAGGTAGCGTCAGGTGCTGTAACAAATAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360890.6
CDS-3UTR GCA 90 bp GCCCTCCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGATAAACATCCACAAATaGGGATGGATCCATAGAAAG +
Preference number: 4 (lower is better)
Translates to: ALRVCVLILFIEVPSAMEINIHK*GWIHRK
Trigger: CTTTCTATGGATCCATCCGCATTTGTGGATGTTTAT...CTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACACACTCGGAGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp ATTTATTTGTTACAGCACCTGACGCTACCTAATACAGGGTACTGCCTGCCACATTTAGCACGCAGAAGGTaGGTTCCTTCCAGAAGCAGC +
Preference number: 4 (lower is better)
Translates to: IYLLQHLTLPNTGYCLPHLARRR*VPSRSS
Trigger: GCTGCTTCTGGAAGGAACCCACCTTCTGCGTGCTAA...ATGTGGCAGGCAGTACCCTGTATTAGGTAGCGTCAGGTGCTGTAACAAATAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360890.6
CDS-3UTR CCA 90 bp GCCCTCCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGGAGTTTCCATTGAAATaGCTTCTTCAAAGAGGTATG +
Preference number: 4 (lower is better)
Translates to: ALRVCVLILFIEVPSAMEEFPLK*LLQRGM
Trigger: CATACCTCTTTGAAGAAGCCATTTCAATGGAAACTC...CTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACACACTCGGAGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp CCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGGTCAATCCAAATCCTTCTaGGTAACTTCTCTCATTGAG +
Preference number: 4 (lower is better)
Translates to: PSVCAHPFHRSPIGHGEGQSKSF*VTSLIE
Trigger: CTCAATGAGAGAAGTTACCCAGAAGGATTTGGATTG...ACCCTCTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACACACTCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CCA 90 bp CCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGGTAAAGTGACTTTGCTGTaGTGTGCAACATTTGAACGA +
Preference number: 4 (lower is better)
Translates to: PSVCAHPFHRSPIGHGEGKVTLL*CATFER
Trigger: TCGTTCAAATGTTGCACACCACAGCAAAGTCACTTT...ACCCTCTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACACACTCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp ATTTATTTGTTACAGCACCTGACGCTACCTAATACAGGGTACTGCCTGCCACATACCGAAGTAACACTTTaGGCAGCAGAGGATAGCCCT +
Preference number: 4 (lower is better)
Translates to: IYLLQHLTLPNTGYCLPHTEVTL*AAEDSP
Trigger: AGGGCTATCCTCTGCTGCTCAAAGTGTTACTTCGGT...ATGTGGCAGGCAGTACCCTGTATTAGGTAGCGTCAGGTGCTGTAACAAATAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360890.6
CDS-3UTR TCA 90 bp ATTTATTTGTTACAGCACCTGACGCTACCTAATACAGGGTACTGCCTGCCACATAGGACCTGGAAGGCCTaGAGATTCTTAACAGTCACC +
Preference number: 4 (lower is better)
Translates to: IYLLQHLTLPNTGYCLPHRTWKA*RFLTVT
Trigger: GGTGACTGTTAAGAATCTTCAGGCCTTCCAGGTCCT...ATGTGGCAGGCAGTACCCTGTATTAGGTAGCGTCAGGTGCTGTAACAAATAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360890.6
CDS-3UTR TCA 90 bp TATTTGTTACAGCACCTGACGCTACCTAATACAGGGTACTGCCTGCCACATACACATGGTCCTGATGACTaGCAAGACTTGTATGCAGAG +
Preference number: 4 (lower is better)
Translates to: YLLQHLTLPNTGYCLPHTHGPDD*QDLYAE
Trigger: CTCTGCATACAAGTCTTGTCAGTCATCAGGACCATG...TGTATGTGGCAGGCAGTACCCTGTATTAGGTAGCGTCAGGTGCTGTAACAAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360890.6
CDS-3UTR GCA 90 bp TGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGGTTGGGCTGCCACATTTTCGCCTTTaGACATGGTCTTTGTATAAA +
Preference number: 4 (lower is better)
Translates to: CVLILFIEVPSAMERVGLPHFRL*TWSLYK
Trigger: TTTATACAAAGACCATGTGCAAAGGCGAAAATGTGG...CAGCCCAACCCTCTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR GCA 90 bp TATTTGTTACAGCACCTGACGCTACCTAATACAGGGTACTGCCTGCCACATACAATACAGGGTACTGCCTaGCACATACAGTGGCTAACT +
Preference number: 4 (lower is better)
Translates to: YLLQHLTLPNTGYCLPHTIQGTA*HIQWLT
Trigger: AGTTAGCCACTGTATGTGGCAGGCAGTACCCTGTAT...TGTATGTGGCAGGCAGTACCCTGTATTAGGTAGCGTCAGGTGCTGTAACAAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360890.6
CDS-3UTR GCA 90 bp ATTTATTTGTTACAGCACCTGACGCTACCTAATACAGGGTACTGCCTGCCACATCCTAATACAGGGTACTaGCTGCCACATACAGTGGCT +
Preference number: 4 (lower is better)
Translates to: IYLLQHLTLPNTGYCLPHPNTGY*LPHTVA
Trigger: AGCCACTGTATGTGGCAGGCAGTACCCTGTATTAGG...ATGTGGCAGGCAGTACCCTGTATTAGGTAGCGTCAGGTGCTGTAACAAATAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360890.6
CDS-3UTR CCA 90 bp ATTTATTTGTTACAGCACCTGACGCTACCTAATACAGGGTACTGCCTGCCACATAGGGCCTCTAGAAGCTaGAAGAAGTGTTCCTGCACT +
Preference number: 4 (lower is better)
Translates to: IYLLQHLTLPNTGYCLPHRASRS*KKCSCT
Trigger: AGTGCAGGAACACTTCTTCCAGCTTCTAGAGGCCCT...ATGTGGCAGGCAGTACCCTGTATTAGGTAGCGTCAGGTGCTGTAACAAATAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360890.6
CDS-3UTR CCA 90 bp TGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGGTTGGGCTGTTTCGCCTTTGCACATaGTCTTTGTATAAAGATGCA +
Preference number: 4 (lower is better)
Translates to: CVLILFIEVPSAMERVGLFRLCT*SLYKDA
Trigger: TGCATCTTTATACAAAGACCATGTGCAAAGGCGAAA...CAGCCCAACCCTCTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR TCA 90 bp ATTTATTTGTTACAGCACCTGACGCTACCTAATACAGGGTACTGCCTGCCACATCAAGCTGAGGGTAAGTaGTGCTGTCAAACACCTTCA +
Preference number: 4 (lower is better)
Translates to: IYLLQHLTLPNTGYCLPHQAEGK*CCQTPS
Trigger: TGAAGGTGTTTGACAGCATCACTTACCCTCAGCTTG...ATGTGGCAGGCAGTACCCTGTATTAGGTAGCGTCAGGTGCTGTAACAAATAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360890.6
CDS-3UTR CCA 90 bp ATTTATTTGTTACAGCACCTGACGCTACCTAATACAGGGTACTGCCTGCCACATCCTGAACACCAGGAGTaGACACTTTGTTTCCTGACT +
Preference number: 4 (lower is better)
Translates to: IYLLQHLTLPNTGYCLPHPEHQE*TLCFLT
Trigger: AGTCAGGAAACAAAGTGTCCACTCCTGGTGTTCAGG...ATGTGGCAGGCAGTACCCTGTATTAGGTAGCGTCAGGTGCTGTAACAAATAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360890.6
CDS-3UTR TCA 90 bp ATTTATTTGTTACAGCACCTGACGCTACCTAATACAGGGTACTGCCTGCCACATTCTCAAAGGAGGACTTaGAATCACCTTCAGGAGATC +
Preference number: 4 (lower is better)
Translates to: IYLLQHLTLPNTGYCLPHSQRRT*NHLQEI
Trigger: GATCTCCTGAAGGTGATTTCAAGTCCTCCTTTGAGA...ATGTGGCAGGCAGTACCCTGTATTAGGTAGCGTCAGGTGCTGTAACAAATAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360890.6
CDS-3UTR CCA 90 bp TATTTGTTACAGCACCTGACGCTACCTAATACAGGGTACTGCCTGCCACATACAGCCTGCCACATACAGTaGCTAACTGAATTACATGAA +
Preference number: 4 (lower is better)
Translates to: YLLQHLTLPNTGYCLPHTACHIQ*LTELHE
Trigger: TTCATGTAATTCAGTTAGCCACTGTATGTGGCAGGC...TGTATGTGGCAGGCAGTACCCTGTATTAGGTAGCGTCAGGTGCTGTAACAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360890.6
CDS TCA 90 bp GGGCTCGCCACGCTGGGTCCTGGGGGTAGGTGCGGTGGACGAGGCTaGGGAACTGCAGCACGCTGGCCGGGAAGGTCTGTGCCCAGGCAC +
Preference number: 5 (lower is better)
Translates to: GLATLGPGGRCGGRG*GTAARWPGRSVPRH
Trigger: GTGCCTGGGCACAGACCTTCCCGGCCAGCGTGCTGCAGTTCCTCAGCCTCGTCCACCGCACCTACCCCCAGGACCCAGCGTGGCGAGCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000374161.7
CDS CCA 90 bp GGCGGCTATGGCCAAGGTCTGGAGGAACTCCGGGGCTCGCCACGCTaGGTCCTGGGGGTAGGTGCGGTGGACGAGGCTGAGGAACTGCAG +
Preference number: 5 (lower is better)
Translates to: GGYGQGLEELRGSPR*VLGVGAVDEAEELQ
Trigger: CTGCAGTTCCTCAGCCTCGTCCACCGCACCTACCCCCAGGACCCAGCGTGGCGAGCCCCGGAGTTCCTCCAGACCTTGGCCATAGCCGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000374161.7
CDS GCA 90 bp TCCGGGCGGGATGTGCCTTGGTGGGAGCCTGGAGACCCTCCACTGTaGTGTCGCCTTCAGCTGCGGCCTCAGGACTGCTGGTGTTCCGGG +
Preference number: 5 (lower is better)
Translates to: SGRDVPWWEPGDPPL*CRLQLRPQDCWCSG
Trigger: CCCGGAACACCAGCAGTCCTGAGGCCGCAGCTGAAGGCGACAGCACAGTGGAGGGTCTCCAGGCTCCCACCAAGGCACATCCCGCCCGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000374161.7
CDS CCA 90 bp TCAGTCCTGGCCAGGTGGCGCACCAACGTCAGGAAGCGCAGCGGGTaGCCCTCAGTGGCAGCTCCATGCCGGCTGATCAGGAACCAGCAG +
Preference number: 5 (lower is better)
Translates to: SVLARWRTNVRKRSG*PSVAAPCRLIRNQQ
Trigger: CTGCTGGTTCCTGATCAGCCGGCATGGAGCTGCCACTGAGGGCCACCCGCTGCGCTTCCTGACGTTGGTGCGCCACCTGGCCAGGACTGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS CCA 90 bp GAGATGCCTTCCCGATGGGCGGGCAGGCGGGTCACGTGGGTGAGGTaGTCCAGATCCCACAGGATACAGGTGCAGTCCTGGGAGCCGCTC +
Preference number: 5 (lower is better)
Translates to: EMPSRWAGRRVTWVR*SRSHRIQVQSWEPL
Trigger: GAGCGGCTCCCAGGACTGCACCTGTATCCTGTGGGATCTGGACCACCTCACCCACGTGACCCGCCTGCCCGCCCATCGGGAAGGCATCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325239.11
ENST00000465910.5
ENST00000497480.1
CDS CCA 90 bp AACTCCCTCAGCTTCCTCCGGGCGGGATGTGCCTTGGTGGGAGCCTaGAGACCCTCCACTGTGCTGTCGCCTTCAGCTGCGGCCTCAGGA +
Preference number: 5 (lower is better)
Translates to: NSLSFLRAGCALVGA*RPSTVLSPSAAASG
Trigger: TCCTGAGGCCGCAGCTGAAGGCGACAGCACAGTGGAGGGTCTCCAGGCTCCCACCAAGGCACATCCCGCCCGGAGGAAGCTGAGGGAGTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000374161.7
CDS GCA 90 bp CAAGAGGAGCTGCGTGAACTCCCTCAGCTTCCTCCGGGCGGGATGTaGCTTGGTGGGAGCCTGGAGACCCTCCACTGTGCTGTCGCCTTC +
Preference number: 5 (lower is better)
Translates to: QEELRELPQLPPGGM*LGGSLETLHCAVAF
Trigger: GAAGGCGACAGCACAGTGGAGGGTCTCCAGGCTCCCACCAAGGCACATCCCGCCCGGAGGAAGCTGAGGGAGTTCACGCAGCTCCTCTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000374161.7
CDS CCA 90 bp GGCCCCTGCTTGGTCCTCAGGGACTCCTTCAGGTCCCCACGCAAGTaGAGGGTGCCGCTGGCCATGCTGTCCAGAAAGCCAAGGATCTGG +
Preference number: 5 (lower is better)
Translates to: GPCLVLRDSFRSPRK*RVPLAMLSRKPRIW
Trigger: CCAGATCCTTGGCTTTCTGGACAGCATGGCCAGCGGCACCCTCCACTTGCGTGGGGACCTGAAGGAGTCCCTGAGGACCAAGCAGGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS CCA 90 bp GTCGAAGCTTCCGCCCTGCAGAGCGCAGAAGGCCTGGGTGAAGGGTaGCATCCGGACCAGGTAGGAGGCCACGATGATGGCCGAGGAGTA +
Preference number: 5 (lower is better)
Translates to: VEASALQSAEGLGEG*HPDQVGGHDDGRGV
Trigger: TACTCCTCGGCCATCATCGTGGCCTCCTACCTGGTCCGGATGCCACCCTTCACCCAGGCCTTCTGCGCTCTGCAGGGCGGAAGCTTCGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000465910.5
CDS CCA 90 bp GACCTGGGAGGGCCTCAGCGACTGCAGGCTGTAGAAAAAGGGCTGTaGGTGGCCAGGCAGGCTCACGGGGGTGGAGACATCCTTTCCAGG +
Preference number: 5 (lower is better)
Translates to: DLGGPQRLQAVEKGL*VARQAHGGGDILSR
Trigger: CCTGGAAAGGATGTCTCCACCCCCGTGAGCCTGCCTGGCCACCCACAGCCCTTTTTCTACAGCCTGCAGTCGCTGAGGCCCTCCCAGGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000465910.5
CDS CCA 90 bp CCACACACACACCACAGTGCTGGTCCCAGAGGTGACAATCGTTGTTaGGGATGGGCACACGGCGCACAGACAGCGGCCCCAGGCAGCCAG +
Preference number: 5 (lower is better)
Translates to: PHTHHSAGPRGDNRC*GWAHGAQTAAPGSQ
Trigger: CTGGCTGCCTGGGGCCGCTGTCTGTGCGCCGTGTGCCCATCCCCAACAACGATTGTCACCTCTGGGACCAGCACTGTGGTGTGTGTGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325239.11
ENST00000465910.5
ENST00000497480.1
CDS CCA 90 bp GTGCCTGAGACGTCACTGATGGTGATGGCTGAGATGCCTTCCCGATaGGCGGGCAGGCGGGTCACGTGGGTGAGGTGGTCCAGATCCCAC +
Preference number: 5 (lower is better)
Translates to: VPETSLMVMAEMPSR*AGRRVTWVRWSRSH
Trigger: GTGGGATCTGGACCACCTCACCCACGTGACCCGCCTGCCCGCCCATCGGGAAGGCATCTCAGCCATCACCATCAGTGACGTCTCAGGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325239.11
ENST00000465910.5
ENST00000497480.1
CDS GCA 90 bp GGGACTCCTTCAGGTCCCCACGCAAGTGGAGGGTGCCGCTGGCCATaGTGTCCAGAAAGCCAAGGATCTGGAGGCAGCTCTGTATCCGGG +
Preference number: 5 (lower is better)
Translates to: GTPSGPHASGGCRWP*CPESQGSGGSSVSG
Trigger: CCCGGATACAGAGCTGCCTCCAGATCCTTGGCTTTCTGGACAGCATGGCCAGCGGCACCCTCCACTTGCGTGGGGACCTGAAGGAGTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS GCA 90 bp GCTTGGTCCTCAGGGACTCCTTCAGGTCCCCACGCAAGTGGAGGGTaGCGCTGGCCATGCTGTCCAGAAAGCCAAGGATCTGGAGGCAGC +
Preference number: 5 (lower is better)
Translates to: AWSSGTPSGPHASGG*RWPCCPESQGSGGS
Trigger: GCTGCCTCCAGATCCTTGGCTTTCTGGACAGCATGGCCAGCGGCACCCTCCACTTGCGTGGGGACCTGAAGGAGTCCCTGAGGACCAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS GCA 90 bp GACCAGGGCCCTGTGGCAGGAGGCCATGAGGGTCCCAAGCAAGCCTaGTTCGCACATGACCTGGCGGTTCTTCTCCGACTTCACCAGGGA +
Preference number: 5 (lower is better)
Translates to: DQGPVAGGHEGPKQA*FAHDLAVLLRLHQG
Trigger: TCCCTGGTGAAGTCGGAGAAGAACCGCCAGGTCATGTGCGAAGCAGGCTTGCTTGGGACCCTCATGGCCTCCTGCCACAGGGCCCTGGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS GCA 90 bp ACCAACGTCAGGAAGCGCAGCGGGTGGCCCTCAGTGGCAGCTCCATaGCGGCTGATCAGGAACCAGCAGGAGAAGGTCAGACCTCCAGGA +
Preference number: 5 (lower is better)
Translates to: TNVRKRSGWPSVAAP*RLIRNQQEKVRPPG
Trigger: TCCTGGAGGTCTGACCTTCTCCTGCTGGTTCCTGATCAGCCGGCATGGAGCTGCCACTGAGGGCCACCCGCTGCGCTTCCTGACGTTGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS CCA 90 bp AGGCTGACGGAGAAGCAAACAAAGGGTTGCTCAGTCCTGGCCAGGTaGCGCACCAACGTCAGGAAGCGCAGCGGGTGGCCCTCAGTGGCA +
Preference number: 5 (lower is better)
Translates to: RLTEKQTKGCSVLAR*RTNVRKRSGWPSVA
Trigger: TGCCACTGAGGGCCACCCGCTGCGCTTCCTGACGTTGGTGCGCCACCTGGCCAGGACTGAGCAACCCTTTGTTTGCTTCTCCGTCAGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS CCA 90 bp GGCTGTAGAAAAAGGGCTGTGGGTGGCCAGGCAGGCTCACGGGGGTaGAGACATCCTTTCCAGGCAGAGGCTTCCCTGCTGCAGTCCTGG +
Preference number: 5 (lower is better)
Translates to: GCRKRAVGGQAGSRG*RHPFQAEASLLQSW
Trigger: CCAGGACTGCAGCAGGGAAGCCTCTGCCTGGAAAGGATGTCTCCACCCCCGTGAGCCTGCCTGGCCACCCACAGCCCTTTTTCTACAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000465910.5
CDS CCA 90 bp ACACACCACAGTGCTGGTCCCAGAGGTGACAATCGTTGTTGGGGATaGGCACACGGCGCACAGACAGCGGCCCCAGGCAGCCAGGTTCTC +
Preference number: 5 (lower is better)
Translates to: THHSAGPRGDNRCWG*AHGAQTAAPGSQVL
Trigger: GAGAACCTGGCTGCCTGGGGCCGCTGTCTGTGCGCCGTGTGCCCATCCCCAACAACGATTGTCACCTCTGGGACCAGCACTGTGGTGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325239.11
ENST00000465910.5
ENST00000497480.1
CDS CCA 90 bp GCAGGCATCACAGACAGCAAGCAAGAGAGGAGGCTGGTGGATATGTaGGGAGCCGAGCCCTCAGGCCTGGTCCCCCTGAAAGCACGGTGG +
Preference number: 5 (lower is better)
Translates to: AGITDSKQERRLVDM*GAEPSGLVPLKARW
Trigger: CCACCGTGCTTTCAGGGGGACCAGGCCTGAGGGCTCGGCTCCCCACATATCCACCAGCCTCCTCTCTTGCTTGCTGTCTGTGATGCCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374161.7
CDS-3UTR CAA 90 bp CATCGGCCATGGAGAGGGTTGGGCTGCAGAGCTGTGATTGCCAGAGGCCCTTCCCTGACCTCCCACAGGTaGTCAGCCACACCACCAGCC +
Preference number: 5 (lower is better)
Translates to: HRPWRGLGCRAVIARGPSLTSHR*SATPPA
Trigger: GGCTGGTGGTGTGGCTGACAACCTGTGGGAGGTCAG...GGAAGGGCCTCTGGCAATCACAGCTCTGCAGCCCAACCCTCTCCATGGCCGATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS GCA 90 bp GAGAGGTCGTCTGGGCAGAGGCTGACGGAGAAGCAAACAAAGGGTTaGTCAGTCCTGGCCAGGTGGCGCACCAACGTCAGGAAGCGCAGC +
Preference number: 5 (lower is better)
Translates to: ERSSGQRLTEKQTKG*SVLARWRTNVRKRS
Trigger: GCTGCGCTTCCTGACGTTGGTGCGCCACCTGGCCAGGACTGAGCAACCCTTTGTTTGCTTCTCCGTCAGCCTCTGCCCAGACGACCTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS GCA 90 bp CCCAGTGTGTGTGCTCGGAGTGGCACCAGCATCTGCCAGGACTCCTaGCTCAGCGCTGGCTTGTTGCCTGCCTGTGTGACAGACACCACT +
Preference number: 5 (lower is better)
Translates to: PSVCARSGTSICQDS*LSAGLLPACVTDTT
Trigger: AGTGGTGTCTGTCACACAGGCAGGCAACAAGCCAGCGCTGAGGCAGGAGTCCTGGCAGATGCTGGTGCCACTCCGAGCACACACACTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465910.5
CDS CCA 90 bp GCTGCCAACCGAGCTTGCTCCGCAGGCTTCCCCACAAGGGCCTTCTaGAGTTGCTGGGCAAGCTGGTCAGACACGTCTTCAGCCAGCCTT +
Preference number: 5 (lower is better)
Translates to: AANRACSAGFPTRAF*SCWASWSDTSSASL
Trigger: AAGGCTGGCTGAAGACGTGTCTGACCAGCTTGCCCAGCAACTCCAGAAGGCCCTTGTGGGGAAGCCTGCGGAGCAAGCTCGGTTGGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000360890.6
CDS CCA 90 bp AAGTGGAGGGTGCCGCTGGCCATGCTGTCCAGAAAGCCAAGGATCTaGAGGCAGCTCTGTATCCGGGGTGGGAGTGAGCCGCTGGAGGAA +
Preference number: 5 (lower is better)
Translates to: KWRVPLAMLSRKPRI*RQLCIRGGSEPLEE
Trigger: TTCCTCCAGCGGCTCACTCCCACCCCGGATACAGAGCTGCCTCCAGATCCTTGGCTTTCTGGACAGCATGGCCAGCGGCACCCTCCACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS CCA 90 bp TCTTCTGAGTGCAGACTTTCGTGTAAGGCTGGGAAGAAGGTCAGCTaGGTGCAGTCCACCCCCACCTCGTCCGGCTCGCCCTCAGCCTCC +
Preference number: 5 (lower is better)
Translates to: SSECRLSCKAGKKVS*VQSTPTSSGSPSAS
Trigger: GGAGGCTGAGGGCGAGCCGGACGAGGTGGGGGTGGACTGCACCCAGCTGACCTTCTTCCCAGCCTTACACGAAAGTCTGCACTCAGAAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CAA 90 bp GGGTTGGGCTGCAGAGCTGTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGACAACCGGCCCCTGCTaGGTCCTCAGGGACTCCTTC +
Preference number: 5 (lower is better)
Translates to: GLGCRAVIARGPSLRTVGTTGPC*VLRDSF
Trigger: GAAGGAGTCCCTGAGGACCAAGCAGGGGCCGGTTGT...CCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCACAGCTCTGCAGCCCAACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CAA 90 bp AGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCCGGGCGGGATGTGCCTaGGTGGGAGCCTGGAGACCC +
Preference number: 5 (lower is better)
Translates to: SVLLSPPSVCAHPFHRSPRAGCA*VGAWRP
Trigger: GGGTCTCCAGGCTCCCACCAAGGCACATCCCGCCCG...GGGACTTCTATGAAAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS TCA 90 bp GGAGGTCATGGAGATGAGGCTCAGCGCCGTCTGAAGAGCAGTAGTTaGATCCTGGGATTCCCCCAAGGGCTGCGGGGCCTGTGTGACTCC +
Preference number: 5 (lower is better)
Translates to: GGHGDEAQRRLKSSS*ILGFPQGLRGLCDS
Trigger: GGAGTCACACAGGCCCCGCAGCCCTTGGGGGAATCCCAGGATTCAACTACTGCTCTTCAGACGGCGCTGAGCCTCATCTCCATGACCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS TCA 90 bp TGCAGGTTGCGTGGGGAGGTCATGGAGATGAGGCTCAGCGCCGTCTaGAGAGCAGTAGTTGAATCCTGGGATTCCCCCAAGGGCTGCGGG +
Preference number: 5 (lower is better)
Translates to: CRLRGEVMEMRLSAV*RAVVESWDSPKGCG
Trigger: CCCGCAGCCCTTGGGGGAATCCCAGGATTCAACTACTGCTCTTCAGACGGCGCTGAGCCTCATCTCCATGACCTCCCCACGCAACCTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS TCA 90 bp GCACTCAGGGTCCTTGGCCTGCCGCCCGGGCATCAGCTTCATGGCTaGGGACAGGCTTCCACTCCACAAAGTGACTTTGCTGTGGTGTGC +
Preference number: 5 (lower is better)
Translates to: ALRVLGLPPGHQLHG*GQASTPQSDFAVVC
Trigger: GCACACCACAGCAAAGTCACTTTGTGGAGTGGAAGCCTGTCCTCAGCCATGAAGCTGATGCCCGGGCGGCAGGCCAAGGACCCTGAGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS TCA 90 bp TGGTTTGCACCTCATGTCCCTTTCCATGAGGGCAGGGGCTGTGCCTaGCTGCCCAGGGACTTCAATGCAGCAGCGGATCCCCAGTCCTGG +
Preference number: 5 (lower is better)
Translates to: WFAPHVPFHEGRGCA*LPRDFNAAADPQSW
Trigger: CCAGGACTGGGGATCCGCTGCTGCATTGAAGTCCCTGGGCAGTCAGGCACAGCCCCTGCCCTCATGGAAAGGGACATGAGGTGCAAACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465910.5
CDS GCA 90 bp AGGCTGATGAATTTCCGAGGGTCCCCATCAGCCCAGGGAGGGAGCTaGACGTCTCCTAGCACAGTCCCGTCCTGCATGCAGCCGAACTCT +
Preference number: 5 (lower is better)
Translates to: RLMNFRGSPSAQGGS*TSPSTVPSCMQPNS
Trigger: AGAGTTCGGCTGCATGCAGGACGGGACTGTGCTAGGAGACGTGCAGCTCCCTCCCTGGGCTGATGGGGACCCTCGGAAATTCATCAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000465910.5
CDS CCA 90 bp CGAGCTTGCTCCGCAGGCTTCCCCACAAGGGCCTTCTGGAGTTGCTaGGCAAGCTGGTCAGACACGTCTTCAGCCAGCCTTTGGAGACTG +
Preference number: 5 (lower is better)
Translates to: RACSAGFPTRAFWSC*ASWSDTSSASLWRL
Trigger: CAGTCTCCAAAGGCTGGCTGAAGACGTGTCTGACCAGCTTGCCCAGCAACTCCAGAAGGCCCTTGTGGGGAAGCCTGCGGAGCAAGCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000360890.6
CDS CCA 90 bp CTCACTTCAGGGGCAGGGAGAGTGTCCGTGAGCCTGGAGAGGTTCTaGAGGGAGAGCCTGACACAGTCTGTGGCCTGCAGGTACTGGATG +
Preference number: 5 (lower is better)
Translates to: LTSGAGRVSVSLERF*RESLTQSVACRYWM
Trigger: CATCCAGTACCTGCAGGCCACAGACTGTGTCAGGCTCTCCCTCCAGAACCTCTCCAGGCTCACGGACACTCTCCCTGCCCCTGAAGTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000360890.6
CDS CCA 90 bp TCCTCAGGGACTCCTTCAGGTCCCCACGCAAGTGGAGGGTGCCGCTaGCCATGCTGTCCAGAAAGCCAAGGATCTGGAGGCAGCTCTGTA +
Preference number: 5 (lower is better)
Translates to: SSGTPSGPHASGGCR*PCCPESQGSGGSSV
Trigger: TACAGAGCTGCCTCCAGATCCTTGGCTTTCTGGACAGCATGGCCAGCGGCACCCTCCACTTGCGTGGGGACCTGAAGGAGTCCCTGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS CCA 90 bp GCCGTCTTGACTCCCGGTGATGATGATCTGGCTTGTGTCCCATGCTaGGCCCTCCATCAGGCAGCAGCAGGTTATGGCTCCTTCTGGGCC +
Preference number: 5 (lower is better)
Translates to: AVLTPGDDDLACVPC*ALHQAAAGYGSFWA
Trigger: GGCCCAGAAGGAGCCATAACCTGCTGCTGCCTGATGGAGGGCCCAGCATGGGACACAAGCCAGATCATCATCACCGGGAGTCAAGACGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000465910.5
CDS-3UTR CAA 90 bp GCTGTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGAAGGAGGCCCTGGGGTCTGGGCCTTGGAGATaGCCCTTAGCACGCAGAAGG +
Preference number: 5 (lower is better)
Translates to: AVIARGPSLRTVGKEALGSGPWR*PLARRR
Trigger: CCTTCTGCGTGCTAAGGGCAATCTCCAAGGCCCAGA...CCCCAGGGCCTCCTTCCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CAA 90 bp GCTGTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGAAGGAGGCCCTGGGGGCATCAAGGCTGTCTTaGGGCCCGTCCATCAGCTCT +
Preference number: 5 (lower is better)
Translates to: AVIARGPSLRTVGKEALGASRLS*GPSISS
Trigger: AGAGCTGATGGACGGGCCCAAAGACAGCCTTGATGC...CCCCAGGGCCTCCTTCCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCACAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CAA 90 bp AAGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTTGCACTCAGGGTCCTaGGCCTGCCGCCCGGGCATC +
Preference number: 5 (lower is better)
Translates to: KSQFPACCSALRVCVLILLHSGS*ACRPGI
Trigger: GATGCCCGGGCGGCAGGCCAAGGACCCTGAGTGCAA...AAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CAA 90 bp AGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCCCCCTCGGGCGGCCTTaGGTCATGCTGAGCTCCCAC +
Preference number: 5 (lower is better)
Translates to: SVLLSPPSVCAHPFHRSPPLGRP*VMLSSH
Trigger: GTGGGAGCTCAGCATGACCAAAGGCCGCCCGAGGGG...GGGACTTCTATGAAAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCT
61% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CAA 90 bp AAGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTGTGGCCTCTTGGGCTaGGAGGCTGAGCCGGGGGCT +
Preference number: 5 (lower is better)
Translates to: KSQFPACCSALRVCVLILCGLLG*EAEPGA
Trigger: AGCCCCCGGCTCAGCCTCCAAGCCCAAGAGGCCACA...AAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000490507.1
CDS TCA 90 bp AACCCTGCCCAGCGTCTCCGAGTCTGTCCCCGTGAGCACGTACACTaGCTTCAGGAGCAAGTAGCCATCCTGATCCACGTCCCCCTTCCA +
Preference number: 5 (lower is better)
Translates to: NPAQRLRVCPREHVH*LQEQVAILIHVPLP
Trigger: TGGAAGGGGGACGTGGATCAGGATGGCTACTTGCTCCTGAAGTCAGTGTACGTGCTCACGGGGACAGACTCGGAGACGCTGGGCAGGGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000360890.6
CDS GCA 90 bp AACCGAGCTTGCTCCGCAGGCTTCCCCACAAGGGCCTTCTGGAGTTaGTGGGCAAGCTGGTCAGACACGTCTTCAGCCAGCCTTTGGAGA +
Preference number: 5 (lower is better)
Translates to: NRACSAGFPTRAFWS*WASWSDTSSASLWR
Trigger: TCTCCAAAGGCTGGCTGAAGACGTGTCTGACCAGCTTGCCCAGCAACTCCAGAAGGCCCTTGTGGGGAAGCCTGCGGAGCAAGCTCGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000360890.6
CDS GCA 90 bp GCCCTTAGCACGCAGAAGGTGGGTTCCTTCCAGAAGCAGCAGCTGTaGTCCCGAAGGCAGGTCGTGGCAATCAGCAGAGACTGCAGCTCA +
Preference number: 5 (lower is better)
Translates to: ALSTQKVGSFQKQQL*SRRQVVAISRDCSS
Trigger: TGAGCTGCAGTCTCTGCTGATTGCCACGACCTGCCTTCGGGAGCACAGCTGCTGCTTCTGGAAGGAACCCACCTTCTGCGTGCTAAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000360890.6
CDS GCA 90 bp CCACAGGTTGTCAGCCACACCACCAGCCCAAGGAGCTCCTCCAGATaGGGGTCCACTTCGCTCTGGGTCAGCCCATCATACCGAAGTAAC +
Preference number: 5 (lower is better)
Translates to: PQVVSHTTSPRSSSR*GSTSLWVSPSYRSN
Trigger: GTTACTTCGGTATGATGGGCTGACCCAGAGCGAAGTGGACCCGCATCTGGAGGAGCTCCTTGGGCTGGTGGTGTGGCTGACAACCTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000360890.6
CDS GCA 90 bp GGGGCCGGCTTCAGGGGCATGATCTCTACAAACTGCGAGATGGGCTaGAGGGTCCACTCCAGCAGGAAGAAGTTTCGAGCATTCCAGGCC +
Preference number: 5 (lower is better)
Translates to: GAGFRGMISTNCEMG*RVHSSRKKFRAFQA
Trigger: GGCCTGGAATGCTCGAAACTTCTTCCTGCTGGAGTGGACCCTGCAGCCCATCTCGCAGTTTGTAGAGATCATGCCCCTGAAGCCGGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000360890.6
CDS GCA 90 bp GCTCACGGGGGTGGAGACATCCTTTCCAGGCAGAGGCTTCCCTGCTaGAGTCCTGGCTGGGTGAGGTTTGGTAAAGAGCTGTTTGGGCAC +
Preference number: 5 (lower is better)
Translates to: AHGGGDILSRQRLPC*SPGWVRFGKELFGH
Trigger: GTGCCCAAACAGCTCTTTACCAAACCTCACCCAGCCAGGACTGCAGCAGGGAAGCCTCTGCCTGGAAAGGATGTCTCCACCCCCGTGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000465910.5
CDS GCA 90 bp GAAGTCCCATCGGCCATGGAGAGGGTTGGGCTGCAGAGCTGTGATTaGCAGAGGCCCTTCCTTGAGAACTGGACACGGCCAGAGCAGTCA +
Preference number: 5 (lower is better)
Translates to: EVPSAMERVGLQSCD*QRPFLENWTRPEQS
Trigger: TGACTGCTCTGGCCGTGTCCAGTTCTCAAGGAAGGGCCTCTGGCAATCACAGCTCTGCAGCCCAACCCTCTCCATGGCCGATGGGACTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490507.1
CDS CCA 90 bp TCCGCAGGCTTCCCCACAAGGGCCTTCTGGAGTTGCTGGGCAAGCTaGTCAGACACGTCTTCAGCCAGCCTTTGGAGACTGGGAAAGCAG +
Preference number: 5 (lower is better)
Translates to: SAGFPTRAFWSCWAS*SDTSSASLWRLGKQ
Trigger: CTGCTTTCCCAGTCTCCAAAGGCTGGCTGAAGACGTGTCTGACCAGCTTGCCCAGCAACTCCAGAAGGCCCTTGTGGGGAAGCCTGCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000360890.6
CDS CCA 90 bp TTGCCAGAAAGTACAGCAGCAGCTTCAATGCCAGCACAGTGGTGCTaGCATGCAGGTGGCCCTGCAGGAGCAGCAGGAACCAGTCAGGCC +
Preference number: 5 (lower is better)
Translates to: LPESTAAASMPAQWC*HAGGPAGAAGTSQA
Trigger: GGCCTGACTGGTTCCTGCTGCTCCTGCAGGGCCACCTGCATGCCAGCACCACTGTGCTGGCATTGAAGCTGCTGCTGTACTTTCTGGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000374161.7
CDS CCA 90 bp AGGGGCTTGCCAGAAAGTACAGCAGCAGCTTCAATGCCAGCACAGTaGTGCTGGCATGCAGGTGGCCCTGCAGGAGCAGCAGGAACCAGT +
Preference number: 5 (lower is better)
Translates to: RGLPESTAAASMPAQ*CWHAGGPAGAAGTS
Trigger: ACTGGTTCCTGCTGCTCCTGCAGGGCCACCTGCATGCCAGCACCACTGTGCTGGCATTGAAGCTGCTGCTGTACTTTCTGGCAAGCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000374161.7
CDS CCA 90 bp TCCATAGCAGAAAGCAGGACCTCGGACTGGAAGTCTCGCTTCTGTTaGCTGGTGGCGTGGTCTGGAGAAGCCTCCAGGAGCACCTCCAGG +
Preference number: 5 (lower is better)
Translates to: SIAESRTSDWKSRFC*LVAWSGEASRSTSR
Trigger: CCTGGAGGTGCTCCTGGAGGCTTCTCCAGACCACGCCACCAGCCAACAGAAGCGAGACTTCCAGTCCGAGGTCCTGCTTTCTGCTATGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000374161.7
CDS-3UTR CAA 90 bp GCTGTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGAAGGAGGCCCTGGGGCCTCATGATCTTGGCTaGCTTCCGAAGCTGTGCCAG +
Preference number: 5 (lower is better)
Translates to: AVIARGPSLRTVGKEALGPHDLG*LPKLCQ
Trigger: CTGGCACAGCTTCGGAAGCAAGCCAAGATCATGAGG...CCCCAGGGCCTCCTTCCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CAA 90 bp AGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCAAGGCAGCACGACCCTaGGGGGTCACCAGGATCCGG +
Preference number: 5 (lower is better)
Translates to: SVLLSPPSVCAHPFHRSPKAARP*GVTRIR
Trigger: CCGGATCCTGGTGACCCCCAAGGGTCGTGCTGCCTT...GGGACTTCTATGAAAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CAA 90 bp GTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGAAGGAGGCCCTGGGGGTTCAGCAGCTTCTGCACTaGGCTGAGGCTCTTTGCCGT +
Preference number: 5 (lower is better)
Translates to: VIARGPSLRTVGKEALGVQQLLH*AEALCR
Trigger: ACGGCAAAGAGCCTCAGCCAAGTGCAGAAGCTGCTG...AACCCCCAGGGCCTCCTTCCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CAA 90 bp CATCGGCCATGGAGAGGGTTGGGCTGCAGAGCTGTGATTGCCAGAGGCCCTTCCCAGGCGTTGGCTGCCTaGATGTTGCCACATTTTCGC +
Preference number: 5 (lower is better)
Translates to: HRPWRGLGCRAVIARGPSQALAA*MLPHFR
Trigger: GCGAAAATGTGGCAACATCAAGGCAGCCAACGCCTG...GGAAGGGCCTCTGGCAATCACAGCTCTGCAGCCCAACCCTCTCCATGGCCGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CAA 90 bp GGGTTGGGCTGCAGAGCTGTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGGCCAGGGGCTGTCCATaGACATTCCACAGGGACAAG +
Preference number: 5 (lower is better)
Translates to: GLGCRAVIARGPSLRTVGARGCP*TFHRDK
Trigger: CTTGTCCCTGTGGAATGTCAATGGACAGCCCCTGGC...CCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCACAGCTCTGCAGCCCAACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CAA 90 bp GCCCTCCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGCCCACTTGTGGCCTCTaGGGCTTGGAGGCTGAGCCG +
Preference number: 5 (lower is better)
Translates to: ALRVCVLILFIEVPSAMEPTCGL*GLEAEP
Trigger: CGGCTCAGCCTCCAAGCCCAAGAGGCCACAAGTGGG...CTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACACACTCGGAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CAA 90 bp AGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTCCCACTTGTGGCCTCTaGGGCTTGGAGGCTGAGCCG +
Preference number: 5 (lower is better)
Translates to: SHSFQRAAQPSECVCSSFPTCGL*GLEAEP
Trigger: CGGCTCAGCCTCCAAGCCCAAGAGGCCACAAGTGGG...AAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000490507.1
CDS TCA 90 bp GAAGCTGGAAGAAGTGTTCCTGCACTGGGGCCGGCTTCAGGGGCATaGTCTCTACAAACTGCGAGATGGGCTGCAGGGTCCACTCCAGCA +
Preference number: 5 (lower is better)
Translates to: EAGRSVPALGPASGA*SLQTARWAAGSTPA
Trigger: TGCTGGAGTGGACCCTGCAGCCCATCTCGCAGTTTGTAGAGATCATGCCCCTGAAGCCGGCCCCAGTGCAGGAACACTTCTTCCAGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000360890.6
CDS TCA 90 bp AGCCCAATCCTGAGCAAGTCCTGGGTGCTGAAGTGGCCCCTCAGCTaGCAGGCCAGGATGCCAATGATGGTGGAGATCTTGGAGGGGATG +
Preference number: 5 (lower is better)
Translates to: SPILSKSWVLKWPLS*QARMPMMVEILEGM
Trigger: CATCCCCTCCAAGATCTCCACCATCATTGGCATCCTGGCCTGTCAGCTGAGGGGCCACTTCAGCACCCAGGACTTGCTCAGGATTGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000374161.7
CDS GCA 90 bp CATTACAATATCCACGCCCTCAGTGCTGCGTTCCACCCAGGATCCTaGACACAGGCCATCTCTAAACCGTGTGCGGAGGGAGGGGCTTGC +
Preference number: 5 (lower is better)
Translates to: HYNIHALSAAFHPGS*TQAISKPCAEGGAC
Trigger: GCAAGCCCCTCCCTCCGCACACGGTTTAGAGATGGCCTGTGTGCAGGATCCTGGGTGGAACGCAGCACTGAGGGCGTGGATATTGTAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000374161.7
CDS GCA 90 bp TCATGGTGGCCTTCAGCATTTCCAGGAGGAGCAAGGCACCTTCTGTaGACAGCCCAGCCTGGAGGACTTCTTCCTGGTGGTGCCTCTGCA +
Preference number: 5 (lower is better)
Translates to: SWWPSAFPGGARHLL*TAQPGGLLPGGASA
Trigger: TGCAGAGGCACCACCAGGAAGAAGTCCTCCAGGCTGGGCTGTGCACAGAAGGTGCCTTGCTCCTCCTGGAAATGCTGAAGGCCACCATGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000374161.7
CDS GCA 90 bp CATGCCGTCTTGACTCCCGGTGATGATGATCTGGCTTGTGTCCCATaGTGGGCCCTCCATCAGGCAGCAGCAGGTTATGGCTCCTTCTGG +
Preference number: 5 (lower is better)
Translates to: HAVLTPGDDDLACVP*WALHQAAAGYGSFW
Trigger: CCAGAAGGAGCCATAACCTGCTGCTGCCTGATGGAGGGCCCAGCATGGGACACAAGCCAGATCATCATCACCGGGAGTCAAGACGGCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000465910.5
CDS GCA 90 bp AACCCAGCCACTGAAGGGACAACCCTGGGACAGGACACCAAACAATaGATGGCCAGGGAATCACCTTTGACCGTGACCTGGGAGGGCCTC +
Preference number: 5 (lower is better)
Translates to: NPATEGTTLGQDTKQ*MARESPLTVTWEGL
Trigger: GAGGCCCTCCCAGGTCACGGTCAAAGGTGATTCCCTGGCCATGCATTGTTTGGTGTCCTGTCCCAGGGTTGTCCCTTCAGTGGCTGGGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465910.5
CDS CCA 90 bp TGGAGTTGCTGGGCAAGCTGGTCAGACACGTCTTCAGCCAGCCTTTaGAGACTGGGAAAGCAGATGATCCCCACGGAGTGTTCCCAGGCC +
Preference number: 5 (lower is better)
Translates to: WSCWASWSDTSSASL*RLGKQMIPTECSQA
Trigger: GGCCTGGGAACACTCCGTGGGGATCATCTGCTTTCCCAGTCTCCAAAGGCTGGCTGAAGACGTGTCTGACCAGCTTGCCCAGCAACTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000360890.6
CDS CCA 90 bp TGGGTTCCTTCCAGAAGCAGCAGCTGTGCTCCCGAAGGCAGGTCGTaGCAATCAGCAGAGACTGCAGCTCACTTCCTGAGAGGAGTCCCT +
Preference number: 5 (lower is better)
Translates to: WVPSRSSSCAPEGRS*QSAETAAHFLRGVP
Trigger: AGGGACTCCTCTCAGGAAGTGAGCTGCAGTCTCTGCTGATTGCCACGACCTGCCTTCGGGAGCACAGCTGCTGCTTCTGGAAGGAACCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000360890.6
CDS CCA 90 bp ACCAGCGATGCTGAGGATGCTCTGCAGGGCCATGAGGGTGCAGGATaGCCCAGGGCTCTCCTTGATCAGATGCTGTACCTTTCGCAGGAT +
Preference number: 5 (lower is better)
Translates to: TSDAEDALQGHEGAG*PRALLDQMLYLSQD
Trigger: ATCCTGCGAAAGGTACAGCATCTGATCAAGGAGAGCCCTGGGCCATCCTGCACCCTCATGGCCCTGCAGAGCATCCTCAGCATCGCTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000360890.6
CDS CCA 90 bp GCGTTTCCTCATTCGAGCTGGTCCTTCTCTCCAGTCGAGTTCCCATaGGGAACAGGGCTTGGTTTCTTCCCCCTGGCTCCACAAGCCCAG +
Preference number: 5 (lower is better)
Translates to: AFPHSSWSFSPVEFP*GTGLGFFPLAPQAQ
Trigger: CTGGGCTTGTGGAGCCAGGGGGAAGAAACCAAGCCCTGTTCCCCATGGGAACTCGACTGGAGAGAAGGACCAGCTCGAATGAGGAAACGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS CCA 90 bp CTCATGTTCTCTCTGGAGGCCGACTCCCACGTGCTCTTCACACTGTaGAACATTCTGTCTGCCACGTCGAAGCTTCCGCCCTGCAGAGCG +
Preference number: 5 (lower is better)
Translates to: LMFSLEADSHVLFTL*NILSATSKLPPCRA
Trigger: CGCTCTGCAGGGCGGAAGCTTCGACGTGGCAGACAGAATGTTCCACAGTGTGAAGAGCACGTGGGAGTCGGCCTCCAGAGAGAACATGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000465910.5
CDS-3UTR CAA 90 bp AAGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTGCCAGAGGCCCTTCCTaGAGAACTGGACACGGCCAG +
Preference number: 5 (lower is better)
Translates to: KSQFPACCSALRVCVLILARGPS*RTGHGQ
Trigger: CTGGCCGTGTCCAGTTCTCAAGGAAGGGCCTCTGGC...AAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490507.1
CDS TCA 90 bp CACTGCTTGAAGTTGCGTTGGGGGTCACTGCCAGTTTCTCCCTTCTaGACATCCACAACCGGCCCCTGCTTGGTCCTCAGGGACTCCTTC +
Preference number: 5 (lower is better)
Translates to: HCLKLRWGSLPVSPF*TSTTGPCLVLRDSF
Trigger: GAAGGAGTCCCTGAGGACCAAGCAGGGGCCGGTTGTGGATGTTCAGAAGGGAGAAACTGGCAGTGACCCCCAACGCAACTTCAAGCAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS TCA 90 bp TGGCAAAGACAACATCCCAGTGCTCCTGCAGAAAGCCCAGGATGCTaGGAAGGCCGAGGCATTCGGAGAGGGACTGCTGGGGCTTGGATA +
Preference number: 5 (lower is better)
Translates to: WQRQHPSAPAESPGC*EGRGIRRGTAGAWI
Trigger: TATCCAAGCCCCAGCAGTCCCTCTCCGAATGCCTCGGCCTTCTCAGCATCCTGGGCTTTCTGCAGGAGCACTGGGATGTTGTCTTTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS TCA 90 bp CTTCCTTGCCCTGTGCTGGGTGAAGTGGGAGAACCACCCTCTTCCTaGCCCTACCACCCAGGAGGAAGAGAGGGAGCAGGATTCAGGAAA +
Preference number: 5 (lower is better)
Translates to: LPCPVLGEVGEPPSS*PYHPGGREGAGFRK
Trigger: TTTCCTGAATCCTGCTCCCTCTCTTCCTCCTGGGTGGTAGGGTCAGGAAGAGGGTGGTTCTCCCACTTCACCCAGCACAGGGCAAGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465910.5
CDS GCA 90 bp AGAGCTGTGGGGCTGGAGGACTGCCCTCCATGTGGGACATCAGGCTaGACAGCAGCAAGCTGCCCTTCATTTTTGGAACCTGGGTCTTCA +
Preference number: 5 (lower is better)
Translates to: RAVGLEDCPPCGTSG*TAASCPSFLEPGSS
Trigger: TGAAGACCCAGGTTCCAAAAATGAAGGGCAGCTTGCTGCTGTGCAGCCTGATGTCCCACATGGAGGGCAGTCCTCCAGCCCCACAGCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000360890.6
CDS GCA 90 bp TGCAGCTCGAACACCAGGGCCTCTAGAAGCTGGAAGAAGTGTTCCTaGACTGGGGCCGGCTTCAGGGGCATGATCTCTACAAACTGCGAG +
Preference number: 5 (lower is better)
Translates to: CSSNTRASRSWKKCS*TGAGFRGMISTNCE
Trigger: CTCGCAGTTTGTAGAGATCATGCCCCTGAAGCCGGCCCCAGTGCAGGAACACTTCTTCCAGCTTCTAGAGGCCCTGGTGTTCGAGCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000360890.6
CDS GCA 90 bp CTTCCAGCAGGCAGGGAAGGGTCCAGGGCTCCGTCCATGCAGATCTaGCTCTCATTCACCGACGAAGGCTTGAGGGTGTACACAACAAAC +
Preference number: 5 (lower is better)
Translates to: LPAGREGSRAPSMQI*LSFTDEGLRVYTTN
Trigger: GTTTGTTGTGTACACCCTCAAGCCTTCGTCGGTGAATGAGAGGCAGATCTGCATGGACGGAGCCCTGGACCCTTCCCTGCCTGCTGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000374161.7
CDS GCA 90 bp TCCTGCACACAGGCCATCTCTAAACCGTGTGCGGAGGGAGGGGCTTaGCAGAAAGTACAGCAGCAGCTTCAATGCCAGCACAGTGGTGCT +
Preference number: 5 (lower is better)
Translates to: SCTQAISKPCAEGGA*QKVQQQLQCQHSGA
Trigger: AGCACCACTGTGCTGGCATTGAAGCTGCTGCTGTACTTTCTGGCAAGCCCCTCCCTCCGCACACGGTTTAGAGATGGCCTGTGTGCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000374161.7
CDS CCA 90 bp CAAACAGCCATAACCTTCCACGGACATGTCAAATTCCACAAACGATaGGGCCAGGGCTGCCCTCTGAGGCTGCAGGTTGCGTGGGGAGGT +
Preference number: 5 (lower is better)
Translates to: QTAITFHGHVKFHKR*GQGCPLRLQVAWGG
Trigger: ACCTCCCCACGCAACCTGCAGCCTCAGAGGGCAGCCCTGGCCCCATCGTTTGTGGAATTTGACATGTCCGTGGAAGGTTATGGCTGTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CAA 90 bp AGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCAGAGACAGCAGCCCGTaGAACCCGCTGGAGACTCTG +
Preference number: 5 (lower is better)
Translates to: SVLLSPPSVCAHPFHRSPRDSSP*NPLETL
Trigger: CAGAGTCTCCAGCGGGTTCAACGGGCTGCTGTCTCT...GGGACTTCTATGAAAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CAA 90 bp CCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGGTCAAGAGCGCAGCAGGTaGCCCTCTTCCTCCAGGGCT +
Preference number: 5 (lower is better)
Translates to: PSVCAHPFHRSPIGHGEGQERSR*PSSSRA
Trigger: AGCCCTGGAGGAAGAGGGCAACCTGCTGCGCTCTTG...ACCCTCTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACACACTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CAA 90 bp GCCCTCCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGGGCCACTGCTTGAAGTaGCGTTGGGGGTCACTGCCA +
Preference number: 5 (lower is better)
Translates to: ALRVCVLILFIEVPSAMEGHCLK*RWGSLP
Trigger: TGGCAGTGACCCCCAACGCAACTTCAAGCAGTGGCC...CTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACACACTCGGAGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CAA 90 bp CATCGGCCATGGAGAGGGTTGGGCTGCAGAGCTGTGATTGCCAGAGGCCCTTCCTCCTGGGTCCTTCCCTaGGTGATTGAAGGATTTCCA +
Preference number: 5 (lower is better)
Translates to: HRPWRGLGCRAVIARGPSSWVLP*VIEGFP
Trigger: TGGAAATCCTTCAATCACCAAGGGAAGGACCCAGGA...GGAAGGGCCTCTGGCAATCACAGCTCTGCAGCCCAACCCTCTCCATGGCCGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CAA 90 bp GGGTTGGGCTGCAGAGCTGTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGTGTCTTTCCAGATGTTaGGCTTCCAGCAGGCAGGGA +
Preference number: 5 (lower is better)
Translates to: GLGCRAVIARGPSLRTVGCLSRC*ASSRQG
Trigger: TCCCTGCCTGCTGGAAGCCAAACATCTGGAAAGACA...CCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCACAGCTCTGCAGCCCAACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CAA 90 bp GCCCTCCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGTGCGGAGGGAGGGGCTaGCCAGAAAGTACAGCAGCA +
Preference number: 5 (lower is better)
Translates to: ALRVCVLILFIEVPSAMECGGRG*PESTAA
Trigger: TGCTGCTGTACTTTCTGGCAAGCCCCTCCCTCCGCA...CTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACACACTCGGAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CAA 90 bp AGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCGAAGTCTCGCTTCTGTaGGCTGGTGGCGTGGTCTGG +
Preference number: 5 (lower is better)
Translates to: SVLLSPPSVCAHPFHRSPEVSLL*AGGVVW
Trigger: CCAGACCACGCCACCAGCCAACAGAAGCGAGACTTC...GGGACTTCTATGAAAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CAA 90 bp CCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGGTCAGGGTCTGCTGCCTTaGTGCCACCAGCTGCTGCCA +
Preference number: 5 (lower is better)
Translates to: PSVCAHPFHRSPIGHGEGQGLLP*CHQLLP
Trigger: TGGCAGCAGCTGGTGGCACAAAGGCAGCAGACCCTG...ACCCTCTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACACACTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CAA 90 bp AGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTATCCTGGCCCAGGCGTaGGCTGCCTTGATGTTGCCA +
Preference number: 5 (lower is better)
Translates to: SHSFQRAAQPSECVCSSFILAQA*AALMLP
Trigger: TGGCAACATCAAGGCAGCCAACGCCTGGGCCAGGAT...AAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CAA 90 bp AGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCTGGCCAATGGCCCCTTaGGGGGACTCTGAGCCTAGA +
Preference number: 5 (lower is better)
Translates to: SVLLSPPSVCAHPFHRSPWPMAP*GDSEPR
Trigger: TCTAGGCTCAGAGTCCCCCAAAGGGGCCATTGGCCA...GGGACTTCTATGAAAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CAA 90 bp CCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGGTCTCAGCCTGGCACTGTaGTGCCAGAGCCTCTGCTGC +
Preference number: 5 (lower is better)
Translates to: PSVCAHPFHRSPIGHGEGLSLAL*CQSLCC
Trigger: GCAGCAGAGGCTCTGGCACAACAGTGCCAGGCTGAG...ACCCTCTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACACACTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CAA 90 bp AGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCGCCAGAGGCCCTTCCTaGAGAACTGTGGGGAAGGAG +
Preference number: 5 (lower is better)
Translates to: SVLLSPPSVCAHPFHRSPARGPS*RTVGKE
Trigger: CTCCTTCCCCACAGTTCTCAAGGAAGGGCCTCTGGC...GGGACTTCTATGAAAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS TCA 90 bp GCCTTCAAGCTGAGGGTAAGTGATGCTGTCAAACACCTTCAGCTCTaGCCTCCCACAGGTTGTCAGCCACACCACCAGCCCAAGGAGCTC +
Preference number: 5 (lower is better)
Translates to: AFKLRVSDAVKHLQL*PPTGCQPHHQPKEL
Trigger: GAGCTCCTTGGGCTGGTGGTGTGGCTGACAACCTGTGGGAGGTCAGAGCTGAAGGTGTTTGACAGCATCACTTACCCTCAGCTTGAAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000360890.6
CDS GCA 90 bp GGGGCTGAGATCACCATGATGTGCTCCAGGATGAAGAGGAGGATATaGCTGGGGTCTGCCGAGAACATCCCACTGTACAGCTTCTCCACC +
Preference number: 5 (lower is better)
Translates to: GAEITMMCSRMKRRI*LGSAENIPLYSFST
Trigger: GGTGGAGAAGCTGTACAGTGGGATGTTCTCGGCAGACCCCAGGCATATCCTCCTCTTCATCCTGGAGCACATCATGGTGATCTCAGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374161.7
CDS GCA 90 bp GCAGCCATTCAAAGTCAGTCCCCAATACTTTGCCCAGGTATGTGGTaGTGGACCTCCAGAGGAACCCAGCCACTGAAGGGACAACCCTGG +
Preference number: 5 (lower is better)
Translates to: AAIQSQSPILCPGMW*WTSRGTQPLKGQPW
Trigger: CCAGGGTTGTCCCTTCAGTGGCTGGGTTCCTCTGGAGGTCCAGCACCACATACCTGGGCAAAGTATTGGGGACTGACTTTGAATGGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465910.5
CDS CCA 90 bp ATTCCAGAAACTTCCTTTCCAGCATGTCCCAGAGAGCTGTGGGGCTaGAGGACTGCCCTCCATGTGGGACATCAGGCTGCACAGCAGCAA +
Preference number: 5 (lower is better)
Translates to: IPETSFPACPRELWG*RTALHVGHQAAQQQ
Trigger: TTGCTGCTGTGCAGCCTGATGTCCCACATGGAGGGCAGTCCTCCAGCCCCACAGCTCTCTGGGACATGCTGGAAAGGAAGTTTCTGGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000360890.6
CDS CCA 90 bp CTGACACAGTCTGTGGCCTGCAGGTACTGGATGATGCTGAGGTTCTaGGCCTTGGAGATTGCCCTTAGCACGCAGAAGGTGGGTTCCTTC +
Preference number: 5 (lower is better)
Translates to: LTQSVACRYWMMLRF*ALEIALSTQKVGSF
Trigger: GAAGGAACCCACCTTCTGCGTGCTAAGGGCAATCTCCAAGGCCCAGAACCTCAGCATCATCCAGTACCTGCAGGCCACAGACTGTGTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000360890.6
CDS CCA 90 bp CTGGTCAGGACCGAGTGCAGAACTTTCACAGCCGCATACATGGTATaGTCATCTGTCGCTAAGGAGATGAGGCCCAGGAGGATGGCAGGC +
Preference number: 5 (lower is better)
Translates to: LVRTECRTFTAAYMV*SSVAKEMRPRRMAG
Trigger: GCCTGCCATCCTCCTGGGCCTCATCTCCTTAGCGACAGATGACCATACCATGTATGCGGCTGTGAAAGTTCTGCACTCGGTCCTGACCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS CCA 90 bp CATGGCATCAAGGCTGTCTTTGGGCCCGTCCATCAGCTCTGTGAGTaGTGTCTGCAGGAAGAAGGTGGAGACGATGAGGTAGACCTCTGG +
Preference number: 5 (lower is better)
Translates to: HGIKAVFGPVHQLCE*CLQEEGGDDEVDLW
Trigger: CCAGAGGTCTACCTCATCGTCTCCACCTTCTTCCTGCAGACACCACTCACAGAGCTGATGGACGGGCCCAAAGACAGCCTTGATGCCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000374161.7
CDS-3UTR CAA 90 bp GCCCTCCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGCTGAGGTTCTGGGCCTaGGAGATTGCCCTTAGCACG +
Preference number: 5 (lower is better)
Translates to: ALRVCVLILFIEVPSAMELRFWA*EIALST
Trigger: CGTGCTAAGGGCAATCTCCAAGGCCCAGAACCTCAG...CTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACACACTCGGAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CAA 90 bp TTACAGCACCTGACGCTACCTAATACAGGGTACTGCCTGCCACATACAGTGGCTCTGACCTCCCACAGGTaGTCAGCCACACCACCAGCC +
Preference number: 5 (lower is better)
Translates to: LQHLTLPNTGYCLPHTVALTSHR*SATPPA
Trigger: GGCTGGTGGTGTGGCTGACAACCTGTGGGAGGTCAG...AGCCACTGTATGTGGCAGGCAGTACCCTGTATTAGGTAGCGTCAGGTGCTGTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360890.6
CDS-3UTR CAA 90 bp GTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGAAGGAGGCCCTGGGGGTTAGGCTGAGCTCCAGATaGTCTGCAGTATTCATCCAG +
Preference number: 5 (lower is better)
Translates to: VIARGPSLRTVGKEALGVRLSSR*SAVFIQ
Trigger: CTGGATGAATACTGCAGACAATCTGGAGCTCAGCCT...AACCCCCAGGGCCTCCTTCCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CAA 90 bp TGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGGTTGGGCTGCATGGGGAACAGGGCTaGGTTTCTTCCCCCTGGCTC +
Preference number: 5 (lower is better)
Translates to: CVLILFIEVPSAMERVGLHGEQG*VSSPWL
Trigger: GAGCCAGGGGGAAGAAACCAAGCCCTGTTCCCCATG...CAGCCCAACCCTCTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CAA 90 bp GTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGAAGGAGGCCCTGGGGGTTGCAGATGTAGAAGTGTaGGTGGCCAAAAAGCAGGAC +
Preference number: 5 (lower is better)
Translates to: VIARGPSLRTVGKEALGVADVEV*VAKKQD
Trigger: GTCCTGCTTTTTGGCCACCAACACTTCTACATCTGC...AACCCCCAGGGCCTCCTTCCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS TCA 90 bp GGTCAGACACGTCTTCAGCCAGCCTTTGGAGACTGGGAAAGCAGATaGTCCCCACGGAGTGTTCCCAGGCCTTTAGGAATAGGGGGAGAA +
Preference number: 5 (lower is better)
Translates to: GQTRLQPAFGDWESR*SPRSVPRPLGIGGE
Trigger: TTCTCCCCCTATTCCTAAAGGCCTGGGAACACTCCGTGGGGATCATCTGCTTTCCCAGTCTCCAAAGGCTGGCTGAAGACGTGTCTGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000360890.6
CDS TCA 90 bp CTCGCAGATGTAGAAGTGTTGGTGGCCAAAAAGCAGGACCCCTTCTaGCACCAGGTGGCCCTGCACAATCACCAGGGAGAACTTCTGCGT +
Preference number: 5 (lower is better)
Translates to: LADVEVLVAKKQDPF*HQVALHNHQGELLR
Trigger: ACGCAGAAGTTCTCCCTGGTGATTGTGCAGGGCCACCTGGTGTCAGAAGGGGTCCTGCTTTTTGGCCACCAACACTTCTACATCTGCGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS TCA 90 bp TGGTTAAGAACTCAGGCAGGTAGAAGAACTCTGGGGTCAGCTCCCTaGCGTCACTCATGTTCTCTCTGGAGGCCGACTCCCACGTGCTCT +
Preference number: 5 (lower is better)
Translates to: WLRTQAGRRTLGSAP*RHSCSLWRPTPTCS
Trigger: AGAGCACGTGGGAGTCGGCCTCCAGAGAGAACATGAGTGACGTCAGGGAGCTGACCCCAGAGTTCTTCTACCTGCCTGAGTTCTTAACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000465910.5
CDS TCA 90 bp CAGACAAGTGAAGATGGCTCTAGAAACTGTGAAGAGGCCCAGTCCTaGGGTCTGTGGGTGACTCTGCAGTCAGAAGGGTGCTGGGAGCCA +
Preference number: 5 (lower is better)
Translates to: QTSEDGSRNCEEAQS*GLWVTLQSEGCWEP
Trigger: TGGCTCCCAGCACCCTTCTGACTGCAGAGTCACCCACAGACCTCAGGACTGGGCCTCTTCACAGTTTCTAGAGCCATCTTCACTTGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374161.7
CDS TCA 90 bp GAACCACCCCCACCCCAGTGGACTCCTGCTTCTATAGAGCCTCTCTaGGCCTTGGTGGCAGCCAAGGAAGCCACTGAATTATGGTCAGAA +
Preference number: 5 (lower is better)
Translates to: EPPPPQWTPASIEPL*ALVAAKEATELWSE
Trigger: TTCTGACCATAATTCAGTGGCTTCCTTGGCTGCCACCAAGGCTCAGAGAGGCTCTATAGAAGCAGGAGTCCACTGGGGTGGGGGTGGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465910.5
CDS GCA 90 bp CACCATGATGTGCTCCAGGATGAAGAGGAGGATATGCCTGGGGTCTaGCGAGAACATCCCACTGTACAGCTTCTCCACCAGCTTCTGGGT +
Preference number: 5 (lower is better)
Translates to: HHDVLQDEEEDMPGV*REHPTVQLLHQLLG
Trigger: ACCCAGAAGCTGGTGGAGAAGCTGTACAGTGGGATGTTCTCGGCAGACCCCAGGCATATCCTCCTCTTCATCCTGGAGCACATCATGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000374161.7
CDS GCA 90 bp GGTTTCACAGAGAGATCGATCTTGAAGGCATCCTCCAGGGTCTGCTaGCTTTGTGCCACCAGCTGCTGCCAGAGAGTCTGCACTGTCTTC +
Preference number: 5 (lower is better)
Translates to: GFTERSILKASSRVC*LCATSCCQRVCTVF
Trigger: GAAGACAGTGCAGACTCTCTGGCAGCAGCTGGTGGCACAAAGGCAGCAGACCCTGGAGGATGCCTTCAAGATCGATCTCTCTGTGAAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS GCA 90 bp GCTGTGACTGGAGATGCAGCCATTCAAAGTCAGTCCCCAATACTTTaGCCAGGTATGTGGTGCTGGACCTCCAGAGGAACCCAGCCACTG +
Preference number: 5 (lower is better)
Translates to: AVTGDAAIQSQSPIL*PGMWCWTSRGTQPL
Trigger: CAGTGGCTGGGTTCCTCTGGAGGTCCAGCACCACATACCTGGGCAAAGTATTGGGGACTGACTTTGAATGGCTGCATCTCCAGTCACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465910.5
CDS CCA 90 bp AGTGGAATACCCTCACCCCTAATTGACCCACAGCAACAGCTCCAATaGTCCGCAGAGACCCTGACAGGTGGCCAGCACAATTCCTCAGCA +
Preference number: 5 (lower is better)
Translates to: SGIPSPLIDPQQQLQ*SAETLTGGQHNSSA
Trigger: TGCTGAGGAATTGTGCTGGCCACCTGTCAGGGTCTCTGCGGACCATTGGAGCTGTTGCTGTGGGTCAATTAGGGGTGAGGGTATTCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS CCA 90 bp TCTCTATACATGACACAAAATCCTCTGTCTTGCACTCAGGGTCCTTaGCCTGCCGCCCGGGCATCAGCTTCATGGCTGAGGACAGGCTTC +
Preference number: 5 (lower is better)
Translates to: SLYMTQNPLSCTQGP*PAARASASWLRTGF
Trigger: GAAGCCTGTCCTCAGCCATGAAGCTGATGCCCGGGCGGCAGGCCAAGGACCCTGAGTGCAAGACAGAGGATTTTGTGTCATGTATAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS CCA 90 bp GGAGACATCCTTTCCAGGCAGAGGCTTCCCTGCTGCAGTCCTGGCTaGGTGAGGTTTGGTAAAGAGCTGTTTGGGCACCTGTCCAAAGTT +
Preference number: 5 (lower is better)
Translates to: GDILSRQRLPCCSPG*VRFGKELFGHLSKV
Trigger: AACTTTGGACAGGTGCCCAAACAGCTCTTTACCAAACCTCACCCAGCCAGGACTGCAGCAGGGAAGCCTCTGCCTGGAAAGGATGTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000465910.5
CDS CCA 90 bp TCTCCCCATAGGGAAGGGACTGTGGCATCAATGGCCCTTACCTTCTaGGGCTGCTCAGATCAAAGGGAGAGAGTAAAGCCAGGCCCCTTA +
Preference number: 5 (lower is better)
Translates to: SPHREGTVASMALTF*GCSDQRERVKPGPL
Trigger: TAAGGGGCCTGGCTTTACTCTCTCCCTTTGATCTGAGCAGCCCCAGAAGGTAAGGGCCATTGATGCCACAGTCCCTTCCCTATGGGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465910.5
CDS-3UTR CAA 90 bp TGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGGTTGGGCTGAAGGGCCTTCTGGAGTaGCTGGGCAAGCTGGTCAGA +
Preference number: 5 (lower is better)
Translates to: CVLILFIEVPSAMERVGLKGLLE*LGKLVR
Trigger: TCTGACCAGCTTGCCCAGCAACTCCAGAAGGCCCTT...CAGCCCAACCCTCTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CAA 90 bp CAGCACCTGACGCTACCTAATACAGGGTACTGCCTGCCACATACAGTGGCTAACCTGAGGTTCTGGGCCTaGGAGATTGCCCTTAGCACG +
Preference number: 5 (lower is better)
Translates to: QHLTLPNTGYCLPHTVANLRFWA*EIALST
Trigger: CGTGCTAAGGGCAATCTCCAAGGCCCAGAACCTCAG...GTTAGCCACTGTATGTGGCAGGCAGTACCCTGTATTAGGTAGCGTCAGGTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360890.6
CDS-3UTR CAA 90 bp GCCCTCCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGGGCCCAGGGCTCTCCTaGATCAGATGCTGTACCTTT +
Preference number: 5 (lower is better)
Translates to: ALRVCVLILFIEVPSAMEGPGLS*IRCCTF
Trigger: AAAGGTACAGCATCTGATCAAGGAGAGCCCTGGGCC...CTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACACACTCGGAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CAA 90 bp TGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGGTTGGGCTGCAAATGGCCTGGCCTTaGTGTCCACCCAAGAGCGCA +
Preference number: 5 (lower is better)
Translates to: CVLILFIEVPSAMERVGLQMAWP*CPPKSA
Trigger: TGCGCTCTTGGGTGGACACAAAGGCCAGGCCATTTG...CAGCCCAACCCTCTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CAA 90 bp AGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTCTGCTTGAAGTTGCGTaGGGGGTCACTGCCAGTTTC +
Preference number: 5 (lower is better)
Translates to: SHSFQRAAQPSECVCSSFLLEVA*GVTASF
Trigger: GAAACTGGCAGTGACCCCCAACGCAACTTCAAGCAG...AAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CAA 90 bp TGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGGTTGGGCTGAGGTCTGGCCACTGCTaGAAGTTGCGTTGGGGGTCA +
Preference number: 5 (lower is better)
Translates to: CVLILFIEVPSAMERVGLRSGHC*KLRWGS
Trigger: TGACCCCCAACGCAACTTCAAGCAGTGGCCAGACCT...CAGCCCAACCCTCTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CAA 90 bp AGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCGAAGCAAACAAAGGGTaGCTCAGTCCTGGCCAGGTG +
Preference number: 5 (lower is better)
Translates to: SVLLSPPSVCAHPFHRSPEANKG*LSPGQV
Trigger: CACCTGGCCAGGACTGAGCAACCCTTTGTTTGCTTC...GGGACTTCTATGAAAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CAA 90 bp TGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGGTTGGGCTGGTCCAGGTCCTCCCCTaGGACATGCACAGCTTGGAA +
Preference number: 5 (lower is better)
Translates to: CVLILFIEVPSAMERVGLVQVLP*DMHSLE
Trigger: TTCCAAGCTGTGCATGTCCAAGGGGAGGACCTGGAC...CAGCCCAACCCTCTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CAA 90 bp CCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGGTATGATGGTGGAGATCTaGGAGGGGATGAGGCTCGGC +
Preference number: 5 (lower is better)
Translates to: PSVCAHPFHRSPIGHGEGMMVEI*EGMRLG
Trigger: GCCGAGCCTCATCCCCTCCAAGATCTCCACCATCAT...ACCCTCTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACACACTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CAA 90 bp CATCGGCCATGGAGAGGGTTGGGCTGCAGAGCTGTGATTGCCAGAGGCCCTTCCCTTCTGGATGTTGTGTaGGACATCACTCAAACTTGG +
Preference number: 5 (lower is better)
Translates to: HRPWRGLGCRAVIARGPSLLDVV*DITQTW
Trigger: CCAAGTTTGAGTGATGTCCAACACAACATCCAGAAG...GGAAGGGCCTCTGGCAATCACAGCTCTGCAGCCCAACCCTCTCCATGGCCGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CAA 90 bp GTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGAAGGAGGCCCTGGGGGTTTGTGGTGTGCAACATTaGAACGACTTGCCAGTGACT +
Preference number: 5 (lower is better)
Translates to: VIARGPSLRTVGKEALGVCGVQH*NDLPVT
Trigger: AGTCACTGGCAAGTCGTTCAAATGTTGCACACCACA...AACCCCCAGGGCCTCCTTCCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CAA 90 bp AAGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTCCCAGGATGGTGCTTTaGATGAGGGGGTCAGTGATG +
Preference number: 5 (lower is better)
Translates to: KSQFPACCSALRVCVLILPRMVL*MRGSVM
Trigger: CATCACTGACCCCCTCATCAAAAGCACCATCCTGGG...AAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CAA 90 bp GGGTTGGGCTGCAGAGCTGTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGTTGGTAAAGAGCTGTTaGGGCACCTGTCCAAAGTTG +
Preference number: 5 (lower is better)
Translates to: GLGCRAVIARGPSLRTVGLVKSC*GTCPKL
Trigger: CAACTTTGGACAGGTGCCCAAACAGCTCTTTACCAA...CCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCACAGCTCTGCAGCCCAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CAA 90 bp AGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCGGAGGCAGCAGCACTTaGTTCCTCTCTACAGCCAGA +
Preference number: 5 (lower is better)
Translates to: SVLLSPPSVCAHPFHRSPGGSST*FLSTAR
Trigger: TCTGGCTGTAGAGAGGAACAAAGTGCTGCTGCCTCC...GGGACTTCTATGAAAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CAA 90 bp TGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGGTTGGGCTGCCGGACCATGCCGTCTaGACTCCCGGTGATGATGAT +
Preference number: 5 (lower is better)
Translates to: CVLILFIEVPSAMERVGLPDHAV*TPGDDD
Trigger: ATCATCATCACCGGGAGTCAAGACGGCATGGTCCGG...CAGCCCAACCCTCTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CAA 90 bp AGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTAGGTTCTTCTCCCACTaGTGGCCTCTTGGGCTTGGA +
Preference number: 5 (lower is better)
Translates to: SHSFQRAAQPSECVCSSFRFFSH*WPLGLG
Trigger: TCCAAGCCCAAGAGGCCACAAGTGGGAGAAGAACCT...AAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000490507.1
CDS TCA 90 bp CCTTGTGCCTTCCTGAGCTCAGGGCCTCCAAAGGAGACAAGCGTTTaGTGCGTTTCCTCATTCGAGCTGGTCCTTCTCTCCAGTCGAGTT +
Preference number: 5 (lower is better)
Translates to: PCAFLSSGPPKETSV*CVSSFELVLLSSRV
Trigger: AACTCGACTGGAGAGAAGGACCAGCTCGAATGAGGAAACGCATCAAACGCTTGTCTCCTTTGGAGGCCCTGAGCTCAGGAAGGCACAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS TCA 90 bp GTCTCCTGGAGCCCACATGGGAGATTTGAGCTCCCTTGTTACTGTTaGTGTGGTTTGCACCTCATGTCCCTTTCCATGAGGGCAGGGGCT +
Preference number: 5 (lower is better)
Translates to: VSWSPHGRFELPCYC*CGLHLMSLSMRAGA
Trigger: AGCCCCTGCCCTCATGGAAAGGGACATGAGGTGCAAACCACATCAACAGTAACAAGGGAGCTCAAATCTCCCATGTGGGCTCCAGGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465910.5
CDS TCA 90 bp GGAAGAGAGGGAGCAGGATTCAGGAAAGGCTCCAGGATAAGACTGTaGGATGTCTCTCCCCATAGGGAAGGGACTGTGGCATCAATGGCC +
Preference number: 5 (lower is better)
Translates to: GREGAGFRKGSRIRL*DVSPHREGTVASMA
Trigger: GGCCATTGATGCCACAGTCCCTTCCCTATGGGGAGAGACATCTCACAGTCTTATCCTGGAGCCTTTCCTGAATCCTGCTCCCTCTCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465910.5
CDS GCA 90 bp GTCTCAATGACCACCATGATGTGCTCCAGGATGAAGAGGAGGATATaGCTGGGGTCTGCCGAGAACATCCCACTGTACAGCTTCTCCACC +
Preference number: 5 (lower is better)
Translates to: VSMTTMMCSRMKRRI*LGSAENIPLYSFST
Trigger: GGTGGAGAAGCTGTACAGTGGGATGTTCTCGGCAGACCCCAGGCATATCCTCCTCTTCATCCTGGAGCACATCATGGTGGTCATTGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS GCA 90 bp ATGGCTTGCCCAAGGTCACACAGTCAGGAAGCAGTAGGACTGGAATaGACTCCTGGGCCATCTGCCCCAGAGCACATGTTCTTAGCTACT +
Preference number: 5 (lower is better)
Translates to: MACPRSHSQEAVGLE*TPGPSAPEHMFLAT
Trigger: AGTAGCTAAGAACATGTGCTCTGGGGCAGATGGCCCAGGAGTGCATTCCAGTCCTACTGCTTCCTGACTGTGTGACCTTGGGCAAGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465910.5
CDS CCA 90 bp CTTGTCATGTGGAATAGTTCCATAGCAGAAAGCAGGACCTCGGACTaGAAGTCTCGCTTCTGTTGGCTGGTGGCGTGGTCTGGAGAAGCC +
Preference number: 5 (lower is better)
Translates to: LVMWNSSIAESRTSD*KSRFCWLVAWSGEA
Trigger: GGCTTCTCCAGACCACGCCACCAGCCAACAGAAGCGAGACTTCCAGTCCGAGGTCCTGCTTTCTGCTATGGAACTATTCCACATGACAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000374161.7
CDS-3UTR CAA 90 bp GTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGAAGGAGGCCCTGGGGGTTAGCTGCCCTTCATTTTaGGAACCTGGGTCTTCATTT +
Preference number: 5 (lower is better)
Translates to: VIARGPSLRTVGKEALGVSCPSF*EPGSSF
Trigger: AAATGAAGACCCAGGTTCCAAAAATGAAGGGCAGCT...AACCCCCAGGGCCTCCTTCCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CAA 90 bp GCTGTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGAAGGAGGCCCTGGGGCTGCACGAACATCTTTaGAACTTGAAGATCACTCTC +
Preference number: 5 (lower is better)
Translates to: AVIARGPSLRTVGKEALGLHEHL*NLKITL
Trigger: GAGAGTGATCTTCAAGTTCAAAAGATGTTCGTGCAG...CCCCAGGGCCTCCTTCCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CAA 90 bp CAGCACCTGACGCTACCTAATACAGGGTACTGCCTGCCACATACAGTGGCTAACGGCCCAGGGCTCTCCTaGATCAGATGCTGTACCTTT +
Preference number: 5 (lower is better)
Translates to: QHLTLPNTGYCLPHTVANGPGLS*IRCCTF
Trigger: AAAGGTACAGCATCTGATCAAGGAGAGCCCTGGGCC...GTTAGCCACTGTATGTGGCAGGCAGTACCCTGTATTAGGTAGCGTCAGGTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360890.6
CDS-3UTR CAA 90 bp CAGCACCTGACGCTACCTAATACAGGGTACTGCCTGCCACATACAGTGGCTAACCCTCATGATCTTGGCTaGCTTCCGAAGCTGTGCCAG +
Preference number: 5 (lower is better)
Translates to: QHLTLPNTGYCLPHTVANPHDLG*LPKLCQ
Trigger: CTGGCACAGCTTCGGAAGCAAGCCAAGATCATGAGG...GTTAGCCACTGTATGTGGCAGGCAGTACCCTGTATTAGGTAGCGTCAGGTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360890.6
CDS-3UTR CAA 90 bp GCCCTCCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGTCATCCAGGAAGATCTaGATGAAGGGCACCATGCCG +
Preference number: 5 (lower is better)
Translates to: ALRVCVLILFIEVPSAMESSRKI*MKGTMP
Trigger: CGGCATGGTGCCCTTCATCAAGATCTTCCTGGATGA...CTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACACACTCGGAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CAA 90 bp GTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGAAGGAGGCCCTGGGGGTTAATCAAGGATTTTTGTaGTGGCCGACAGAGATGAGG +
Preference number: 5 (lower is better)
Translates to: VIARGPSLRTVGKEALGVNQGFL*WPTEMR
Trigger: CCTCATCTCTGTCGGCCACAACAAAAATCCTTGATT...AACCCCCAGGGCCTCCTTCCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CAA 90 bp GGGTTGGGCTGCAGAGCTGTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGTGGATGTATAACATCTaGGCAGAGCCAATGACCTGT +
Preference number: 5 (lower is better)
Translates to: GLGCRAVIARGPSLRTVGWMYNI*AEPMTC
Trigger: ACAGGTCATTGGCTCTGCCAAGATGTTATACATCCA...CCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCACAGCTCTGCAGCCCAACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CAA 90 bp GCCCTCCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGGAAATGTTCATCTCTTaGGCGATCAGGCGGCTGTCC +
Preference number: 5 (lower is better)
Translates to: ALRVCVLILFIEVPSAMEEMFIS*AIRRLS
Trigger: GGACAGCCGCCTGATCGCCAAAGAGATGAACATTTC...CTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACACACTCGGAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CAA 90 bp GCCCTCCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGACAGAGAGATCGATCTaGAAGGCATCCTCCAGGGTC +
Preference number: 5 (lower is better)
Translates to: ALRVCVLILFIEVPSAMETERSI*KASSRV
Trigger: GACCCTGGAGGATGCCTTCAAGATCGATCTCTCTGT...CTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACACACTCGGAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CAA 90 bp GTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGAAGGAGGCCCTGGGGGTTAAAGGAGACAAGCGTTaGATGCGTTTCCTCATTCGA +
Preference number: 5 (lower is better)
Translates to: VIARGPSLRTVGKEALGVKGDKR*MRFLIR
Trigger: TCGAATGAGGAAACGCATCAAACGCTTGTCTCCTTT...AACCCCCAGGGCCTCCTTCCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CAA 90 bp AGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCTTGTCTTGGCTTTCCTaGTGCCTTCCTGAGCTCAGG +
Preference number: 5 (lower is better)
Translates to: SVLLSPPSVCAHPFHRSPLSWLS*CLPELR
Trigger: CCTGAGCTCAGGAAGGCACAAGGAAAGCCAAGACAA...GGGACTTCTATGAAAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CAA 90 bp TGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGGTTGGGCTGCTCCCAGCCGCGGTGTaGAGGTACATGAGATACTCA +
Preference number: 5 (lower is better)
Translates to: CVLILFIEVPSAMERVGLLPAAV*RYMRYS
Trigger: TGAGTATCTCATGTACCTCAACACCGCGGCTGGGAG...CAGCCCAACCCTCTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CAA 90 bp AGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTGAGCCCCCATGGGCTTaGAAAGATCCCGGAAAATCT +
Preference number: 5 (lower is better)
Translates to: SHSFQRAAQPSECVCSSFEPPWA*KDPGKS
Trigger: AGATTTTCCGGGATCTTTCAAAGCCCATGGGGGCTC...AAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CAA 90 bp AAGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTCTACCCCGTTGCAGTaGGTTAAGAACTCAGGCAGG +
Preference number: 5 (lower is better)
Translates to: KSQFPACCSALRVCVLILSTPLQ*VKNSGR
Trigger: CCTGCCTGAGTTCTTAACCAACTGCAACGGGGTAGA...AAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CAA 90 bp AGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTGCTGGCCCCTGCTGCTaGTACCCAAAAATAAGGTCT +
Preference number: 5 (lower is better)
Translates to: SHSFQRAAQPSECVCSSFAGPCC*YPKIRS
Trigger: AGACCTTATTTTTGGGTACAAGCAGCAGGGGCCAGC...AAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CAA 90 bp CCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGGTGGCACCTGTCCAAAGTaGCTGACAAACCCCAGGATG +
Preference number: 5 (lower is better)
Translates to: PSVCAHPFHRSPIGHGEGGTCPK*LTNPRM
Trigger: CATCCTGGGGTTTGTCAGCAACTTTGGACAGGTGCC...ACCCTCTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACACACTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CAA 90 bp AGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTAAGAGGTACATATCTTaGACCGTGACCTGGGAGGGC +
Preference number: 5 (lower is better)
Translates to: SHSFQRAAQPSECVCSSFKRYIS*TVTWEG
Trigger: GCCCTCCCAGGTCACGGTCAAAGATATGTACCTCTT...AAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CAA 90 bp TGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGGTTGGGCTGAGGTTCTTCTCCCACTaGTGGCCTCTTGGGCTTGGA +
Preference number: 5 (lower is better)
Translates to: CVLILFIEVPSAMERVGLRFFSH*WPLGLG
Trigger: TCCAAGCCCAAGAGGCCACAAGTGGGAGAAGAACCT...CAGCCCAACCCTCTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS TCA 90 bp CGGAGCAGAGACTTCAGGAGATCCAGTTTCAGCTGCAGCTCCCCTTaGGTGGATGAGCATAGAGCACCCACAATGATGCTCATGTACTCC +
Preference number: 5 (lower is better)
Translates to: RSRDFRRSSFSCSSP*VDEHRAPTMMLMYS
Trigger: GGAGTACATGAGCATCATTGTGGGTGCTCTATGCTCATCCACTCAAGGGGAGCTGCAGCTGAAACTGGATCTCCTGAAGTCTCTGCTCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS TCA 90 bp ATGGCTCTAGAAACTGTGAAGAGGCCCAGTCCTGAGGTCTGTGGGTaGCTCTGCAGTCAGAAGGGTGCTGGGAGCCAATTTCACTCTCTA +
Preference number: 5 (lower is better)
Translates to: MALETVKRPSPEVCG*LCSQKGAGSQFHSL
Trigger: TAGAGAGTGAAATTGGCTCCCAGCACCCTTCTGACTGCAGAGTCACCCACAGACCTCAGGACTGGGCCTCTTCACAGTTTCTAGAGCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374161.7
CDS GCA 90 bp CATAGGGAAGGGACTGTGGCATCAATGGCCCTTACCTTCTGGGGCTaGTCAGATCAAAGGGAGAGAGTAAAGCCAGGCCCCTTAAAGCAA +
Preference number: 5 (lower is better)
Translates to: HREGTVASMALTFWG*SDQRERVKPGPLKQ
Trigger: TTGCTTTAAGGGGCCTGGCTTTACTCTCTCCCTTTGATCTGAGCAGCCCCAGAAGGTAAGGGCCATTGATGCCACAGTCCCTTCCCTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465910.5
CDS CCA 90 bp ACCCTGACAGGTGGCCAGCACAATTCCTCAGCAAGAACACGGGCATaGCATTGTCACGGGATGAAATGTTCATCTCTTTGGCGATCAGGC +
Preference number: 5 (lower is better)
Translates to: TLTGGQHNSSARTRA*HCHGMKCSSLWRSG
Trigger: GCCTGATCGCCAAAGAGATGAACATTTCATCCCGTGACAATGCCATGCCCGTGTTCTTGCTGAGGAATTGTGCTGGCCACCTGTCAGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS CCA 90 bp GAGTGGTGTCTGCAGGAAGAAGGTGGAGACGATGAGGTAGACCTCTaGAATGTGGACGTGGTGGGCCAGAAAGTCATTCAAGACACGGAA +
Preference number: 5 (lower is better)
Translates to: EWCLQEEGGDDEVDL*NVDVVGQKVIQDTE
Trigger: TTCCGTGTCTTGAATGACTTTCTGGCCCACCACGTCCACATTCCAGAGGTCTACCTCATCGTCTCCACCTTCTTCCTGCAGACACCACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000374161.7
CDS-3UTR CAA 90 bp GGGTTGGGCTGCAGAGCTGTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGTCAAGAAGCTCATCTTaGTCCAGAGGAAAGACAAAG +
Preference number: 5 (lower is better)
Translates to: GLGCRAVIARGPSLRTVGSRSSS*SRGKTK
Trigger: CTTTGTCTTTCCTCTGGACAAAGATGAGCTTCTTGA...CCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCACAGCTCTGCAGCCCAACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CAA 90 bp AGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCCCAGGAGTGGACACTTaGTTTCCTGACTTCCTCATG +
Preference number: 5 (lower is better)
Translates to: SVLLSPPSVCAHPFHRSPPGVDT*FPDFLM
Trigger: CATGAGGAAGTCAGGAAACAAAGTGTCCACTCCTGG...GGGACTTCTATGAAAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CAA 90 bp GTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGAAGGAGGCCCTGGGGGTTATGAATCAAGGATTTTaGTTGTGGCCGACAGAGATG +
Preference number: 5 (lower is better)
Translates to: VIARGPSLRTVGKEALGVMNQGF*LWPTEM
Trigger: CATCTCTGTCGGCCACAACAAAAATCCTTGATTCAT...AACCCCCAGGGCCTCCTTCCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CAA 90 bp AGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTATCCAGAGCTCGAAATaGCAGAGGATGTGCTGGAAG +
Preference number: 5 (lower is better)
Translates to: SHSFQRAAQPSECVCSSFIQSSK*QRMCWK
Trigger: CTTCCAGCACATCCTCTGCAATTTCGAGCTCTGGAT...AAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CAA 90 bp AAGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTTCACCGACGAAGGCTaGAGGGTGTACACAACAAAC +
Preference number: 5 (lower is better)
Translates to: KSQFPACCSALRVCVLILFTDEG*RVYTTN
Trigger: GTTTGTTGTGTACACCCTCAAGCCTTCGTCGGTGAA...AAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CAA 90 bp GTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGAAGGAGGCCCTGGGGGTTCTTTCACGTCTTCATTaGGGGAAAGGAAGACTTGAT +
Preference number: 5 (lower is better)
Translates to: VIARGPSLRTVGKEALGVLSRLH*GKGRLD
Trigger: ATCAAGTCTTCCTTTCCCCAAATGAAGACGTGAAAG...AACCCCCAGGGCCTCCTTCCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CAA 90 bp AGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTTTGGCTGCCTTGATGTaGCCACATTTTCGCCTTTGC +
Preference number: 5 (lower is better)
Translates to: SHSFQRAAQPSECVCSSFLAALM*PHFRLC
Trigger: GCAAAGGCGAAAATGTGGCAACATCAAGGCAGCCAA...AAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS TCA 90 bp TGTGCAGTCTGTGACCCTGAGCACCCAGGGTTGCCTCTGTGTGTGTaGGATGAATCAAGGATTTTTGTTGTGGCCGACAGAGATGAGGGA +
Preference number: 5 (lower is better)
Translates to: CAVCDPEHPGLPLCV*DESRIFVVADRDEG
Trigger: TCCCTCATCTCTGTCGGCCACAACAAAAATCCTTGATTCATCTCACACACACAGAGGCAACCCTGGGTGCTCAGGGTCACAGACTGCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS TCA 90 bp CGGGCATCAGCTTCATGGCTGAGGACAGGCTTCCACTCCACAAAGTaGCTTTGCTGTGGTGTGCAACATTTGAACGACTTGCCAGTGACT +
Preference number: 5 (lower is better)
Translates to: RASASWLRTGFHSTK*LCCGVQHLNDLPVT
Trigger: AGTCACTGGCAAGTCGTTCAAATGTTGCACACCACAGCAAAGTCACTTTGTGGAGTGGAAGCCTGTCCTCAGCCATGAAGCTGATGCCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS CCA 90 bp GCTGGCCCCTGCTGCTTGTACCCAAAAATAAGGTCTATCCAATGGTaGAGGTTGGCACTGACAAAGTCACTTTCCAGGGCCTTTCTGTGC +
Preference number: 5 (lower is better)
Translates to: AGPCCLYPKIRSIQW*RLALTKSLSRAFLC
Trigger: GCACAGAAAGGCCCTGGAAAGTGACTTTGTCAGTGCCAACCTCCACCATTGGATAGACCTTATTTTTGGGTACAAGCAGCAGGGGCCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000465910.5
CDS-3UTR CAA 90 bp TGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGGTTGGGCTGGACTTCCTCATGATCTaGGCTTGCTTCCGAAGCTGT +
Preference number: 5 (lower is better)
Translates to: CVLILFIEVPSAMERVGLDFLMI*ACFRSC
Trigger: ACAGCTTCGGAAGCAAGCCAAGATCATGAGGAAGTC...CAGCCCAACCCTCTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CAA 90 bp CAGCACCTGACGCTACCTAATACAGGGTACTGCCTGCCACATACAGTGGCTAACGACTTCCTCATGATCTaGGCTTGCTTCCGAAGCTGT +
Preference number: 5 (lower is better)
Translates to: QHLTLPNTGYCLPHTVANDFLMI*ACFRSC
Trigger: ACAGCTTCGGAAGCAAGCCAAGATCATGAGGAAGTC...GTTAGCCACTGTATGTGGCAGGCAGTACCCTGTATTAGGTAGCGTCAGGTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360890.6
CDS-3UTR CAA 90 bp CCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGGTAACACGGGCATGGCATaGTCACGGGATGAAATGTTC +
Preference number: 5 (lower is better)
Translates to: PSVCAHPFHRSPIGHGEGNTGMA*SRDEMF
Trigger: GAACATTTCATCCCGTGACAATGCCATGCCCGTGTT...ACCCTCTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACACACTCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CAA 90 bp AAGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTATGAGGCTCGGCTCATaGAATAGGAAGATGAGCTTG +
Preference number: 5 (lower is better)
Translates to: KSQFPACCSALRVCVLILMRLGS*NRKMSL
Trigger: CAAGCTCATCTTCCTATTCAATGAGCCGAGCCTCAT...AAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CAA 90 bp AGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTCTGCATCACCTCCACTaGTCATGTGGAATAGTTCCA +
Preference number: 5 (lower is better)
Translates to: SHSFQRAAQPSECVCSSFLHHLH*SCGIVP
Trigger: TGGAACTATTCCACATGACAAGTGGAGGTGATGCAG...AAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CAA 90 bp TGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGGTTGGGCTGGAGGACAGTGTCCCTTaGAGAAGAGGCAGTCTCAAT +
Preference number: 5 (lower is better)
Translates to: CVLILFIEVPSAMERVGLEDSVP*RRGSLN
Trigger: ATTGAGACTGCCTCTTCTCAAAGGGACACTGTCCTC...CAGCCCAACCCTCTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CAA 90 bp GTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGAAGGAGGCCCTGGGGGTTCAGTGTCAGTTCATCTaGGTTTTCAGCATTTGTTTG +
Preference number: 5 (lower is better)
Translates to: VIARGPSLRTVGKEALGVQCQFI*VFSICL
Trigger: CAAACAAATGCTGAAAACCAAGATGAACTGACACTG...AACCCCCAGGGCCTCCTTCCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CAA 90 bp AGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTTCTTTGCTGCACAGGTaGAAAATGAACGGATCGCTG +
Preference number: 5 (lower is better)
Translates to: SHSFQRAAQPSECVCSSFSLLHR*KMNGSL
Trigger: CAGCGATCCGTTCATTTTCAACCTGTGCAGCAAAGA...AAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CAA 90 bp AAGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTCAGTGGACCTGTCTTaGCTGCACAGGTTGAAAATG +
Preference number: 5 (lower is better)
Translates to: KSQFPACCSALRVCVLILSVDLS*LHRLKM
Trigger: CATTTTCAACCTGTGCAGCAAAGACAGGTCCACTGA...AAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CAA 90 bp TGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGGTTGGGCTGCCGAACTCTACCCCGTaGCAGTTGGTTAAGAACTCA +
Preference number: 5 (lower is better)
Translates to: CVLILFIEVPSAMERVGLPNSTP*QLVKNS
Trigger: TGAGTTCTTAACCAACTGCAACGGGGTAGAGTTCGG...CAGCCCAACCCTCTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CAA 90 bp GCCCTCCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGATCCAATGGTGGAGGTaGGCACTGACAAAGTCACTT +
Preference number: 5 (lower is better)
Translates to: ALRVCVLILFIEVPSAMEIQWWR*ALTKSL
Trigger: AAGTGACTTTGTCAGTGCCAACCTCCACCATTGGAT...CTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACACACTCGGAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS TCA 90 bp AGCAGAGACTGCAGCTCACTTCCTGAGAGGAGTCCCTCCAGGCCCTaGGAGTCACTGCAAATATTGAGCAACATCTGCACGAACATCTTT +
Preference number: 5 (lower is better)
Translates to: SRDCSSLPERSPSRP*ESLQILSNICTNIF
Trigger: AAAGATGTTCGTGCAGATGTTGCTCAATATTTGCAGTGACTCTCAGGGCCTGGAGGGACTCCTCTCAGGAAGTGAGCTGCAGTCTCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000360890.6
CDS TCA 90 bp GCTGGTAAGATCTGCATCAGTCTCCTGGAGCCCACATGGGAGATTTaGGCTCCCTTGTTACTGTTGATGTGGTTTGCACCTCATGTCCCT +
Preference number: 5 (lower is better)
Translates to: AGKICISLLEPTWEI*APLLLLMWFAPHVP
Trigger: AGGGACATGAGGTGCAAACCACATCAACAGTAACAAGGGAGCTCAAATCTCCCATGTGGGCTCCAGGAGACTGATGCAGATCTTACCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465910.5
CDS GCA 90 bp GATAGAGGAGCTGGCTATGTGAAGTCCAAAAGAAACTCTTTCTTCTaGAACAAAGGGCGTGGCTTCACTGTCCAGGTCCTCCCCTTGGAC +
Preference number: 5 (lower is better)
Translates to: DRGAGYVKSKRNSFF*NKGRGFTVQVLPLD
Trigger: GTCCAAGGGGAGGACCTGGACAGTGAAGCCACGCCCTTTGTTGCAGAAGAAAGAGTTTCTTTTGGACTTCACATAGCCAGCTCCTCTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS GCA 90 bp TGGGACCTGCATGTTGTTCAGTGTAGTGGGATTTCCCCAAGGCAGTaGATGTCCTCAGATGACACTGGCACCCGACTTCATACATACATG +
Preference number: 5 (lower is better)
Translates to: WDLHVVQCSGISPRQ*MSSDDTGTRLHTYM
Trigger: CATGTATGTATGAAGTCGGGTGCCAGTGTCATCTGAGGACATGCACTGCCTTGGGGAAATCCCACTACACTGAACAACATGCAGGTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465910.5
CDS CCA 90 bp CTGAAACTCCTTCTCTTCTGTAGAAACAACCAAGGAGAGGTCGTCTaGGCAGAGGCTGACGGAGAAGCAAACAAAGGGTTGCTCAGTCCT +
Preference number: 5 (lower is better)
Translates to: LKLLLFCRNNQGEVV*AEADGEANKGLLSP
Trigger: AGGACTGAGCAACCCTTTGTTTGCTTCTCCGTCAGCCTCTGCCCAGACGACCTCTCCTTGGTTGTTTCTACAGAAGAGAAGGAGTTTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CAA 90 bp AGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCTTCTGTCTTCAGCCTTaGAAAGATCTTCTGCCTCCA +
Preference number: 5 (lower is better)
Translates to: SVLLSPPSVCAHPFHRSPFCLQP*KDLLPP
Trigger: TGGAGGCAGAAGATCTTTCAAAGGCTGAAGACAGAA...GGGACTTCTATGAAAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CAA 90 bp GTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGAAGGAGGCCCTGGGGGTTGAACATCTTTTGAACTaGAAGATCACTCTCAAGAAG +
Preference number: 5 (lower is better)
Translates to: VIARGPSLRTVGKEALGVEHLLN*KITLKK
Trigger: CTTCTTGAGAGTGATCTTCAAGTTCAAAAGATGTTC...AACCCCCAGGGCCTCCTTCCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CAA 90 bp AGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCGAGTCACTGCAAATATaGAGCAACATCTGCACGAAC +
Preference number: 5 (lower is better)
Translates to: SVLLSPPSVCAHPFHRSPESLQI*SNICTN
Trigger: GTTCGTGCAGATGTTGCTCAATATTTGCAGTGACTC...GGGACTTCTATGAAAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CAA 90 bp TATTTGTTACAGCACCTGACGCTACCTAATACAGGGTACTGCCTGCCACATACATCTGGGCCTTGGAGATaGCCCTTAGCACGCAGAAGG +
Preference number: 5 (lower is better)
Translates to: YLLQHLTLPNTGYCLPHTSGPWR*PLARRR
Trigger: CCTTCTGCGTGCTAAGGGCAATCTCCAAGGCCCAGA...TGTATGTGGCAGGCAGTACCCTGTATTAGGTAGCGTCAGGTGCTGTAACAAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360890.6
CDS-3UTR CAA 90 bp GCCCTCCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGACAGAGTCACTGGCTTaGTGGAAAACATTCTGTAGG +
Preference number: 5 (lower is better)
Translates to: ALRVCVLILFIEVPSAMETESLA*WKTFCR
Trigger: CCTACAGAATGTTTTCCACAAAGCCAGTGACTCTGT...CTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACACACTCGGAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CAA 90 bp GGGTTGGGCTGCAGAGCTGTGATTGCCAGAGGCCCTTCCTTGAGAACTGTGGGGTATCTTGGGCCAAGTTaGTTAATAACTTCCAGAGTT +
Preference number: 5 (lower is better)
Translates to: GLGCRAVIARGPSLRTVGYLGPS*LITSRV
Trigger: AACTCTGGAAGTTATTAACAAACTTGGCCCAAGATA...CCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCACAGCTCTGCAGCCCAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CAA 90 bp CCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGGTAATAGGAAGATGAGCTaGGGTATAAGCTGTGCCTGG +
Preference number: 5 (lower is better)
Translates to: PSVCAHPFHRSPIGHGEGNRKMS*GISCAW
Trigger: CCAGGCACAGCTTATACCCAAGCTCATCTTCCTATT...ACCCTCTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACACACTCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CAA 90 bp TGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGGTTGGGCTGGACTGGCTCTTCAGGTaGTCCATTACAATATCCACG +
Preference number: 5 (lower is better)
Translates to: CVLILFIEVPSAMERVGLDWLFR*SITIST
Trigger: CGTGGATATTGTAATGGACAACCTGAAGAGCCAGTC...CAGCCCAACCCTCTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CAA 90 bp TGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGGTTGGGCTGGTAGACATTCTAGGCTaGGGCTCCAATCCAAATCCT +
Preference number: 5 (lower is better)
Translates to: CVLILFIEVPSAMERVGLVDILG*GSNPNP
Trigger: AGGATTTGGATTGGAGCCCAAGCCTAGAATGTCTAC...CAGCCCAACCCTCTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CAA 90 bp AGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCCTCCACAAAGTGACTTaGCTGTGGTGTGCAACATTT +
Preference number: 5 (lower is better)
Translates to: SVLLSPPSVCAHPFHRSPLHKVT*LWCATF
Trigger: AAATGTTGCACACCACAGCAAAGTCACTTTGTGGAG...GGGACTTCTATGAAAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS TCA 90 bp ATAAGCAGTGACGGGTACAGTAGACATCACCCGTGGGAGACAGTGTaGAGTTCTCGCAGATGTAGAAGTGTTGGTGGCCAAAAAGCAGGA +
Preference number: 5 (lower is better)
Translates to: ISSDGYSRHHPWETV*SSRRCRSVGGQKAG
Trigger: TCCTGCTTTTTGGCCACCAACACTTCTACATCTGCGAGAACTTCACACTGTCTCCCACGGGTGATGTCTACTGTACCCGTCACTGCTTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS TCA 90 bp CTTGAAATCACCTTCAGGAGATCCAGTTTCAGCTGCAGCTCCCCTTaGGTGGATGAGCATAGAGCACCCACAATGATGCTCATGTACTCC +
Preference number: 5 (lower is better)
Translates to: LEITFRRSSFSCSSP*VDEHRAPTMMLMYS
Trigger: GGAGTACATGAGCATCATTGTGGGTGCTCTATGCTCATCCACTCAAGGGGAGCTGCAGCTGAAACTGGATCTCCTGAAGGTGATTTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360890.6
CDS GCA 90 bp TGTTGCATCAGGAAGTCACACATGGCATTACTGGTCAGGACCGAGTaGAGAACTTTCACAGCCGCATACATGGTATGGTCATCTGTCGCT +
Preference number: 5 (lower is better)
Translates to: CCIRKSHMALLVRTE*RTFTAAYMVWSSVA
Trigger: AGCGACAGATGACCATACCATGTATGCGGCTGTGAAAGTTCTGCACTCGGTCCTGACCAGTAATGCCATGTGTGACTTCCTGATGCAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS GCA 90 bp TGGCCCCCACTGGCACCTATGTTTGGGATATTAGCTGGGAGTCCATaGTTTAGCCATAGGGAGCTCAGCAGCTTCTTTCCATTTACAACA +
Preference number: 5 (lower is better)
Translates to: WPPLAPMFGILAGSP*FSHRELSSFFPFTT
Trigger: TGTTGTAAATGGAAAGAAGCTGCTGAGCTCCCTATGGCTAAAGCATGGACTCCCAGCTAATATCCCAAACATAGGTGCCAGTGGGGGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374161.7
CDS CCA 90 bp CTATGTGAAGTCCAAAAGAAACTCTTTCTTCTGCAACAAAGGGCGTaGCTTCACTGTCCAGGTCCTCCCCTTGGACATGCACAGCTTGGA +
Preference number: 5 (lower is better)
Translates to: LCEVQKKLFLLQQRA*LHCPGPPLGHAQLG
Trigger: TCCAAGCTGTGCATGTCCAAGGGGAGGACCTGGACAGTGAAGCCACGCCCTTTGTTGCAGAAGAAAGAGTTTCTTTTGGACTTCACATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS CCA 90 bp GGTACCCACAGATGTGTTGCATCAGGAAGTCACACATGGCATTACTaGTCAGGACCGAGTGCAGAACTTTCACAGCCGCATACATGGTAT +
Preference number: 5 (lower is better)
Translates to: GTHRCVASGSHTWHY*SGPSAELSQPHTWY
Trigger: ATACCATGTATGCGGCTGTGAAAGTTCTGCACTCGGTCCTGACCAGTAATGCCATGTGTGACTTCCTGATGCAACACATCTGTGGGTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS CCA 90 bp TCTTTGCCGTCTCTGAACATCGCTGCATCACCTCCACTTGTCATGTaGAATAGTTCCATAGCAGAAAGCAGGACCTCGGACTGGAAGTCT +
Preference number: 5 (lower is better)
Translates to: SLPSLNIAASPPLVM*NSSIAESRTSDWKS
Trigger: AGACTTCCAGTCCGAGGTCCTGCTTTCTGCTATGGAACTATTCCACATGACAAGTGGAGGTGATGCAGCGATGTTCAGAGACGGCAAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000374161.7
CDS-3UTR CAA 90 bp TTGTTACAGCACCTGACGCTACCTAATACAGGGTACTGCCTGCCACATACAGTGCCAGGAGTGGACACTTaGTTTCCTGACTTCCTCATG +
Preference number: 5 (lower is better)
Translates to: LLQHLTLPNTGYCLPHTVPGVDT*FPDFLM
Trigger: CATGAGGAAGTCAGGAAACAAAGTGTCCACTCCTGG...CACTGTATGTGGCAGGCAGTACCCTGTATTAGGTAGCGTCAGGTGCTGTAACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360890.6
CDS-3UTR CAA 90 bp AGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCGAAACATCTCTTCCTTaGACTCAGAGGACAGATGAA +
Preference number: 5 (lower is better)
Translates to: SVLLSPPSVCAHPFHRSPETSLP*TQRTDE
Trigger: TTCATCTGTCCTCTGAGTCAAAGGAAGAGATGTTTC...GGGACTTCTATGAAAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CAA 90 bp AGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCACTGTCTTCTGGATGTaGTGTTGGACATCACTCAAA +
Preference number: 5 (lower is better)
Translates to: SVLLSPPSVCAHPFHRSPTVFWM*CWTSLK
Trigger: TTTGAGTGATGTCCAACACAACATCCAGAAGACAGT...GGGACTTCTATGAAAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CAA 90 bp CCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGGTCAACATTTGAACGACTaGCCAGTGACTTCTTCTCAG +
Preference number: 5 (lower is better)
Translates to: PSVCAHPFHRSPIGHGEGQHLND*PVTSSQ
Trigger: CTGAGAAGAAGTCACTGGCAAGTCGTTCAAATGTTG...ACCCTCTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACACACTCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CAA 90 bp AGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCATGATCATTTTTGTCTaGGCTTTCCTTGTGCCTTCC +
Preference number: 5 (lower is better)
Translates to: SVLLSPPSVCAHPFHRSPMIIFV*AFLVPS
Trigger: GGAAGGCACAAGGAAAGCCAAGACAAAAATGATCAT...GGGACTTCTATGAAAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CAA 90 bp AGTCACAGTTTCCAGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTAACTTGGAATATCCATaGTGGAAGAAGATCTCCAGG +
Preference number: 5 (lower is better)
Translates to: SHSFQRAAQPSECVCSSFNLEYP*WKKISR
Trigger: CCTGGAGATCTTCTTCCACAATGGATATTCCAAGTT...AAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCTGGAAACTGTGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CAA 90 bp TTACAGCACCTGACGCTACCTAATACAGGGTACTGCCTGCCACATACAGTGGCTTTCTGTCTTCAGCCTTaGAAAGATCTTCTGCCTCCA +
Preference number: 5 (lower is better)
Translates to: LQHLTLPNTGYCLPHTVAFCLQP*KDLLPP
Trigger: TGGAGGCAGAAGATCTTTCAAAGGCTGAAGACAGAA...AGCCACTGTATGTGGCAGGCAGTACCCTGTATTAGGTAGCGTCAGGTGCTGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360890.6
CDS-3UTR CAA 90 bp CCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCATCGGCCATGGAGAGGGTGGAAAATCTTCGGATTaGCCAAGTTCAATGTCTCTG +
Preference number: 5 (lower is better)
Translates to: PSVCAHPFHRSPIGHGEGGKSSD*PSSMSL
Trigger: CAGAGACATTGAACTTGGCAAATCCGAAGATTTTCC...ACCCTCTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACACACTCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS TCA 90 bp GCATTTCTGATGTCCGCTACACTGGTGATAGAGGAGCTGGCTATGTaGAGTCCAAAAGAAACTCTTTCTTCTGCAACAAAGGGCGTGGCT +
Preference number: 5 (lower is better)
Translates to: AFLMSATLVIEELAM*SPKETLSSATKGVA
Trigger: AGCCACGCCCTTTGTTGCAGAAGAAAGAGTTTCTTTTGGACTTCACATAGCCAGCTCCTCTATCACCAGTGTAGCGGACATCAGAAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS GCA 90 bp AACCTGTTGGGGTTTGGGATTCATTTCTTTATCATGTTCCTCTCCTaGTCCTCAGATGGGTCTCAAACAGAGGTTAAGAGGGGCAGGCAT +
Preference number: 5 (lower is better)
Translates to: NLLGFGIHFFIMFLS*SSDGSQTEVKRGRH
Trigger: ATGCCTGCCCCTCTTAACCTCTGTTTGAGACCCATCTGAGGAGCAGGAGAGGAACATGATAAAGAAATGAATCCCAAACCCCAACAGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374161.7
CDS CCA 90 bp CATGTGGGACATCAGGCTGCACAGCAGCAAGCTGCCCTTCATTTTTaGAACCTGGGTCTTCATTTCTGTCTTCAGCCTTTGAAAGATCTT +
Preference number: 5 (lower is better)
Translates to: HVGHQAAQQQAALHF*NLGLHFCLQPLKDL
Trigger: AAGATCTTTCAAAGGCTGAAGACAGAAATGAAGACCCAGGTTCCAAAAATGAAGGGCAGCTTGCTGCTGTGCAGCCTGATGTCCCACATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000360890.6
CDS CCA 90 bp TTAGGAATAGGGGGAGAAGACTCAACAGGCTCTTCTGACGCTCAATaGGGCTCTTGTGAGTCAACTGCTGGTATTCCAGAAACTTCCTTT +
Preference number: 5 (lower is better)
Translates to: LGIGGEDSTGSSDAQ*GSCESTAGIPETSF
Trigger: AAAGGAAGTTTCTGGAATACCAGCAGTTGACTCACAAGAGCCCCATTGAGCGTCAGAAGAGCCTGTTGAGTCTTCTCCCCCTATTCCTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000360890.6
CDS CCA 90 bp TTCATGGCTGAGGACAGGCTTCCACTCCACAAAGTGACTTTGCTGTaGTGTGCAACATTTGAACGACTTGCCAGTGACTTCTTCTCAGAT +
Preference number: 5 (lower is better)
Translates to: FMAEDRLPLHKVTLL*CATFERLASDFFSD
Trigger: ATCTGAGAAGAAGTCACTGGCAAGTCGTTCAAATGTTGCACACCACAGCAAAGTCACTTTGTGGAGTGGAAGCCTGTCCTCAGCCATGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS-3UTR CAA 90 bp TTGTTACAGCACCTGACGCTACCTAATACAGGGTACTGCCTGCCACATACAGTGAGCTGCCCTTCATTTTaGGAACCTGGGTCTTCATTT +
Preference number: 5 (lower is better)
Translates to: LLQHLTLPNTGYCLPHTVSCPSF*EPGSSF
Trigger: AAATGAAGACCCAGGTTCCAAAAATGAAGGGCAGCT...CACTGTATGTGGCAGGCAGTACCCTGTATTAGGTAGCGTCAGGTGCTGTAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360890.6
CDS-3UTR CAA 90 bp ATTTATTTGTTACAGCACCTGACGCTACCTAATACAGGGTACTGCCTGCCACATTCATCCAGGAAGATCTaGATGAAGGGCACCATGCCG +
Preference number: 5 (lower is better)
Translates to: IYLLQHLTLPNTGYCLPHSSRKI*MKGTMP
Trigger: CGGCATGGTGCCCTTCATCAAGATCTTCCTGGATGA...ATGTGGCAGGCAGTACCCTGTATTAGGTAGCGTCAGGTGCTGTAACAAATAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360890.6
CDS-3UTR CAA 90 bp AGCGTGCTGCTCAGCCCTCCGAGTGTGTGTGCTCATCCTTTTCATAGAAGTCCCCTTTGCACATGGTCTTaGTATAAAGATGCATATAGC +
Preference number: 5 (lower is better)
Translates to: SVLLSPPSVCAHPFHRSPLCTWS*YKDAYS
Trigger: GCTATATGCATCTTTATACAAAGACCATGTGCAAAG...GGGACTTCTATGAAAAGGATGAGCACACACACTCGGAGGGCTGAGCAGCACGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS TCA 90 bp ACTACAATCCTCAGCATCACACAGGTGAGTTCTCTTTCTGGATCCTaGACACCAGGAGTGGACACTTTGTTTCCTGACTTCCTCATGATC +
Preference number: 5 (lower is better)
Translates to: TTILSITQVSSLSGS*TPGVDTLFPDFLMI
Trigger: GATCATGAGGAAGTCAGGAAACAAAGTGTCCACTCCTGGTGTTCAGGATCCAGAAAGAGAACTCACCTGTGTGATGCTGAGGATTGTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000360890.6
CDS GCA 90 bp ACTGCCTGCCACATACAGTGGCTAACTGAATTACATGAATACAAATaGCTGAGCAAATGTGGATCGCTTGGTGCATATCCACAGGGAAGC +
Preference number: 5 (lower is better)
Translates to: TACHIQWLTELHEYK*LSKCGSLGAYPQGS
Trigger: GCTTCCCTGTGGATATGCACCAAGCGATCCACATTTGCTCAGGCATTTGTATTCATGTAATTCAGTTAGCCACTGTATGTGGCAGGCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360890.6
CDS-3UTR CAA 90 bp TTGTTACAGCACCTGACGCTACCTAATACAGGGTACTGCCTGCCACATACAGTGTCAAGAAGCTCATCTTaGTCCAGAGGAAAGACAAAG +
Preference number: 5 (lower is better)
Translates to: LLQHLTLPNTGYCLPHTVSRSSS*SRGKTK
Trigger: CTTTGTCTTTCCTCTGGACAAAGATGAGCTTCTTGA...CACTGTATGTGGCAGGCAGTACCCTGTATTAGGTAGCGTCAGGTGCTGTAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360890.6
CDS-3UTR CAA 90 bp CAGCACCTGACGCTACCTAATACAGGGTACTGCCTGCCACATACAGTGGCTAACGAACATCTTTTGAACTaGAAGATCACTCTCAAGAAG +
Preference number: 5 (lower is better)
Translates to: QHLTLPNTGYCLPHTVANEHLLN*KITLKK
Trigger: CTTCTTGAGAGTGATCTTCAAGTTCAAAAGATGTTC...GTTAGCCACTGTATGTGGCAGGCAGTACCCTGTATTAGGTAGCGTCAGGTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360890.6
CDS-3UTR CAA 90 bp TTGTTACAGCACCTGACGCTACCTAATACAGGGTACTGCCTGCCACATACAGTGCTGCACGAACATCTTTaGAACTTGAAGATCACTCTC +
Preference number: 5 (lower is better)
Translates to: LLQHLTLPNTGYCLPHTVLHEHL*NLKITL
Trigger: GAGAGTGATCTTCAAGTTCAAAAGATGTTCGTGCAG...CACTGTATGTGGCAGGCAGTACCCTGTATTAGGTAGCGTCAGGTGCTGTAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360890.6
CDS-3UTR CAA 90 bp ATTTATTTGTTACAGCACCTGACGCTACCTAATACAGGGTACTGCCTGCCACATGCAAATGTGGATCGCTaGGTGCATATCCACAGGGAA +
Preference number: 5 (lower is better)
Translates to: IYLLQHLTLPNTGYCLPHANVDR*VHIHRE
Trigger: TTCCCTGTGGATATGCACCAAGCGATCCACATTTGC...ATGTGGCAGGCAGTACCCTGTATTAGGTAGCGTCAGGTGCTGTAACAAATAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360890.6
CDS TCA 90 bp GATAAATTTCAGCTTCCTTTCCTTGGTCTGAGCCCCCATGGGCTTTaGAAGATCCCGGAAAATCTTCGGATTTGCCAAGTTCAATGTCTC +
Preference number: 5 (lower is better)
Translates to: DKFQLPFLGLSPHGL*KIPENLRICQVQCL
Trigger: GAGACATTGAACTTGGCAAATCCGAAGATTTTCCGGGATCTTTCAAAGCCCATGGGGGCTCAGACCAAGGAAAGGAAGCTGAAATTTATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS CCA 90 bp CAGGGTTGCCTCTGTGTGTGTGAGATGAATCAAGGATTTTTGTTGTaGCCGACAGAGATGAGGGAATTCCAAGACCTAGAAACTGTCTTA +
Preference number: 5 (lower is better)
Translates to: QGCLCVCEMNQGFLL*PTEMREFQDLETVL
Trigger: TAAGACAGTTTCTAGGTCTTGGAATTCCCTCATCTCTGTCGGCCACAACAAAAATCCTTGATTCATCTCACACACACAGAGGCAACCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS TCA 90 bp ACTTTATTTAAACTGCTGTATAAAGTGCTGAGGACAGTGTCCCTTTaGGAAGAGGCAGTCTCAATGACCACCATGATGTGCTCCAGGATG +
Preference number: 5 (lower is better)
Translates to: TLFKLLYKVLRTVSL*EEAVSMTTMMCSRM
Trigger: CATCCTGGAGCACATCATGGTGGTCATTGAGACTGCCTCTTCTCAAAGGGACACTGTCCTCAGCACTTTATACAGCAGTTTAAATAAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS GCA 90 bp GGAGTTGTTCCTGAAGAAGCCTTTGAATTCAAGTCTTTCCAGGTTTaGTTGGACCTGCTCATCAGACAAGTGAAGATGGCTCTAGAAACT +
Preference number: 5 (lower is better)
Translates to: GVVPEEAFEFKSFQV*LDLLIRQVKMALET
Trigger: AGTTTCTAGAGCCATCTTCACTTGTCTGATGAGCAGGTCCAAGCAAACCTGGAAAGACTTGAATTCAAAGGCTTCTTCAGGAACAACTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374161.7
CDS GCA 90 bp ACTGGTCTCTTGAGGAGAGAAGGTATGTGTGTGTACATGTGTGTGTaGATGTATAAAAGAGAGGAAGAGGAAGAGAGATGTGTGTGTGTG +
Preference number: 5 (lower is better)
Translates to: TGLLRREGMCVYMCV*MYKREEEEERCVCV
Trigger: CACACACACACATCTCTCTTCCTCTTCCTCTCTTTTATACATGCACACACACATGTACACACACATACCTTCTCTCCTCAAGAGACCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465910.5
CDS-3UTR CAA 90 bp ATTTATTTGTTACAGCACCTGACGCTACCTAATACAGGGTACTGCCTGCCACATGAGTCACTGCAAATATaGAGCAACATCTGCACGAAC +
Preference number: 5 (lower is better)
Translates to: IYLLQHLTLPNTGYCLPHESLQI*SNICTN
Trigger: GTTCGTGCAGATGTTGCTCAATATTTGCAGTGACTC...ATGTGGCAGGCAGTACCCTGTATTAGGTAGCGTCAGGTGCTGTAACAAATAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360890.6
CDS-3UTR CAA 90 bp ATTTATTTGTTACAGCACCTGACGCTACCTAATACAGGGTACTGCCTGCCACATACAGAGTCACTGGCTTaGTGGAAAACATTCTGTAGG +
Preference number: 5 (lower is better)
Translates to: IYLLQHLTLPNTGYCLPHTESLA*WKTFCR
Trigger: CCTACAGAATGTTTTCCACAAAGCCAGTGACTCTGT...ATGTGGCAGGCAGTACCCTGTATTAGGTAGCGTCAGGTGCTGTAACAAATAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360890.6
CDS-3UTR CAA 90 bp TATTTGTTACAGCACCTGACGCTACCTAATACAGGGTACTGCCTGCCACATACAATCTCAAAGGAGGACTaGAAATCACCTTCAGGAGAT +
Preference number: 5 (lower is better)
Translates to: YLLQHLTLPNTGYCLPHTISKED*KSPSGD
Trigger: ATCTCCTGAAGGTGATTTCAAGTCCTCCTTTGAGAT...TGTATGTGGCAGGCAGTACCCTGTATTAGGTAGCGTCAGGTGCTGTAACAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360890.6
CDS-3UTR CAA 90 bp TATTTGTTACAGCACCTGACGCTACCTAATACAGGGTACTGCCTGCCACATACAGGATATGGGATTTATTaGTTACAGCACCTGACGCTA +
Preference number: 5 (lower is better)
Translates to: YLLQHLTLPNTGYCLPHTGYGIY*LQHLTL
Trigger: TAGCGTCAGGTGCTGTAACAAATAAATCCCATATCC...TGTATGTGGCAGGCAGTACCCTGTATTAGGTAGCGTCAGGTGCTGTAACAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360890.6
CDS TCA 90 bp ACTTCTTTAAACCTCTGGATAAATTTCAGCTTCCTTTCCTTGGTCTaGGCCCCCATGGGCTTTGAAAGATCCCGGAAAATCTTCGGATTT +
Preference number: 5 (lower is better)
Translates to: TSLNLWINFSFLSLV*APMGFERSRKIFGF
Trigger: AAATCCGAAGATTTTCCGGGATCTTTCAAAGCCCATGGGGGCTCAGACCAAGGAAAGGAAGCTGAAATTTATCCAGAGGTTTAAAGAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000465910.5
CDS TCA 90 bp ACAATATCTTGGGCCAAGTTTGTTAATAACTTCCAGAGTTTCCATTaGAATGGCTTCTTCAAAGAGGTATGTGGGGCCAAGACGCCAGAT +
Preference number: 5 (lower is better)
Translates to: TISWAKFVNNFQSFH*NGFFKEVCGAKTPD
Trigger: ATCTGGCGTCTTGGCCCCACATACCTCTTTGAAGAAGCCATTTCAATGGAAACTCTGGAAGTTATTAACAAACTTGGCCCAAGATATTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS TCA 90 bp AGCATGGACTGGTCCATACATCTCCAAACATCTGTTTGGCTTCCATaGAAAGAATCCATAATACAAAGAGTATGCACAAAGTTTTTCAGT +
Preference number: 5 (lower is better)
Translates to: SMDWSIHLQTSVWLP*KESIIQRVCTKFFS
Trigger: ACTGAAAAACTTTGTGCATACTCTTTGTATTATGGATTCTTTTCATGGAAGCCAAACAGATGTTTGGAGATGTATGGACCAGTCCATGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374161.7
CDS TCA 90 bp AAGATTTTAATTCAAAAGAAACTTAGAGGGAGAAGTAGAAGACCCTaGTTTGTAGCCTTAGCATGGACTGGTCCATACATCTCCAAACAT +
Preference number: 5 (lower is better)
Translates to: KILIQKKLRGRSRRP*FVALAWTGPYISKH
Trigger: ATGTTTGGAGATGTATGGACCAGTCCATGCTAAGGCTACAAATCAGGGTCTTCTACTTCTCCCTCTAAGTTTCTTTTGAATTAAAATCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374161.7
CDS CCA 72 bp TGGGCTCCCAGGGGGAAGGCGGCTATGGCCAAGGTCTaGAGGAACTCCGGGGCTCGCCACGCTGGGTCCTGG +
Preference number: 6 (lower is better)
Translates to: WAPRGKAAMAKV*RNSGARHAGSW
Trigger: CCAGGACCCAGCGTGGCGAGCCCCGGAGTTCCTCCAGACCTTGGCCATAGCCGCCTTCCCCCTGGGAGCCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000374161.7
CDS CCA 72 bp GCCAGGTGGCGCACCAACGTCAGGAAGCGCAGCGGGTaGCCCTCAGTGGCAGCTCCATGCCGGCTGATCAGG +
Preference number: 6 (lower is better)
Translates to: ARWRTNVRKRSG*PSVAAPCRLIR
Trigger: CCTGATCAGCCGGCATGGAGCTGCCACTGAGGGCCACCCGCTGCGCTTCCTGACGTTGGTGCGCCACCTGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS TCA 72 bp GGAGGCGCAAGCCCCTCGGGCGGCCTTTGGTCATGCTaGGCTCCCACACACACACCACAGTGCTGGTCCCAG +
Preference number: 6 (lower is better)
Translates to: GGASPSGGLWSC*APTHTPQCWSQ
Trigger: CTGGGACCAGCACTGTGGTGTGTGTGTGGGAGCTCAGCATGACCAAAGGCCGCCCGAGGGGCTTGCGCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325239.11
ENST00000465910.5
ENST00000497480.1
CDS CCA 72 bp TCCGCCCTGCAGAGCGCAGAAGGCCTGGGTGAAGGGTaGCATCCGGACCAGGTAGGAGGCCACGATGATGGC +
Preference number: 6 (lower is better)
Translates to: SALQSAEGLGEG*HPDQVGGHDDG
Trigger: GCCATCATCGTGGCCTCCTACCTGGTCCGGATGCCACCCTTCACCCAGGCCTTCTGCGCTCTGCAGGGCGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000465910.5
CDS CCA 72 bp TCCCGATGGGCGGGCAGGCGGGTCACGTGGGTGAGGTaGTCCAGATCCCACAGGATACAGGTGCAGTCCTGG +
Preference number: 6 (lower is better)
Translates to: SRWAGRRVTWVR*SRSHRIQVQSW
Trigger: CCAGGACTGCACCTGTATCCTGTGGGATCTGGACCACCTCACCCACGTGACCCGCCTGCCCGCCCATCGGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325239.11
ENST00000465910.5
ENST00000497480.1
CDS TCA 72 bp GTCCTGGGAGCCGCTCACCAGGAGGCTGAAGGTGACTaGCGCTGCCAGGCACGTGACAGCCTGTGTGTGTCC +
Preference number: 6 (lower is better)
Translates to: VLGAAHQEAEGD*RCQARDSLCVS
Trigger: GGACACACACAGGCTGTCACGTGCCTGGCAGCGTCAGTCACCTTCAGCCTCCTGGTGAGCGGCTCCCAGGAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325239.11
ENST00000465910.5
ENST00000497480.1
CDS TCA 72 bp TGCCTTCCCGATGGGCGGGCAGGCGGGTCACGTGGGTaGGGTGGTCCAGATCCCACAGGATACAGGTGCAGT +
Preference number: 6 (lower is better)
Translates to: CLPDGRAGGSRG*GGPDPTGYRCS
Trigger: ACTGCACCTGTATCCTGTGGGATCTGGACCACCTCACCCACGTGACCCGCCTGCCCGCCCATCGGGAAGGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325239.11
ENST00000465910.5
ENST00000497480.1
CDS GCA 72 bp GATGTGCCTTGGTGGGAGCCTGGAGACCCTCCACTGTaGTGTCGCCTTCAGCTGCGGCCTCAGGACTGCTGG +
Preference number: 6 (lower is better)
Translates to: DVPWWEPGDPPL*CRLQLRPQDCW
Trigger: CCAGCAGTCCTGAGGCCGCAGCTGAAGGCGACAGCACAGTGGAGGGTCTCCAGGCTCCCACCAAGGCACATC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000374161.7
CDS GCA 72 bp CTGCGTGAACTCCCTCAGCTTCCTCCGGGCGGGATGTaGCTTGGTGGGAGCCTGGAGACCCTCCACTGTGCT +
Preference number: 6 (lower is better)
Translates to: LRELPQLPPGGM*LGGSLETLHCA
Trigger: AGCACAGTGGAGGGTCTCCAGGCTCCCACCAAGGCACATCCCGCCCGGAGGAAGCTGAGGGAGTTCACGCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000374161.7
CDS CCA 72 bp GGGGCAGGGAGAGTGTCCGTGAGCCTGGAGAGGTTCTaGAGGGAGAGCCTGACACAGTCTGTGGCCTGCAGG +
Preference number: 6 (lower is better)
Translates to: GAGRVSVSLERF*RESLTQSVACR
Trigger: CCTGCAGGCCACAGACTGTGTCAGGCTCTCCCTCCAGAACCTCTCCAGGCTCACGGACACTCTCCCTGCCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000360890.6
CDS CCA 72 bp GGGCCTCAGCGACTGCAGGCTGTAGAAAAAGGGCTGTaGGTGGCCAGGCAGGCTCACGGGGGTGGAGACATC +
Preference number: 6 (lower is better)
Translates to: GPQRLQAVEKGL*VARQAHGGGDI
Trigger: GATGTCTCCACCCCCGTGAGCCTGCCTGGCCACCCACAGCCCTTTTTCTACAGCCTGCAGTCGCTGAGGCCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000465910.5
CDS CCA 72 bp AGTGCTGGTCCCAGAGGTGACAATCGTTGTTGGGGATaGGCACACGGCGCACAGACAGCGGCCCCAGGCAGC +
Preference number: 6 (lower is better)
Translates to: SAGPRGDNRCWG*AHGAQTAAPGS
Trigger: GCTGCCTGGGGCCGCTGTCTGTGCGCCGTGTGCCCATCCCCAACAACGATTGTCACCTCTGGGACCAGCACT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325239.11
ENST00000465910.5
ENST00000497480.1
CDS CCA 72 bp GAGATGCCTTCCCGATGGGCGGGCAGGCGGGTCACGTaGGTGAGGTGGTCCAGATCCCACAGGATACAGGTG +
Preference number: 6 (lower is better)
Translates to: EMPSRWAGRRVT*VRWSRSHRIQV
Trigger: CACCTGTATCCTGTGGGATCTGGACCACCTCACCCACGTGACCCGCCTGCCCGCCCATCGGGAAGGCATCTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325239.11
ENST00000465910.5
ENST00000497480.1
CDS CCA 72 bp ACGTCACTGATGGTGATGGCTGAGATGCCTTCCCGATaGGCGGGCAGGCGGGTCACGTGGGTGAGGTGGTCC +
Preference number: 6 (lower is better)
Translates to: TSLMVMAEMPSR*AGRRVTWVRWS
Trigger: GGACCACCTCACCCACGTGACCCGCCTGCCCGCCCATCGGGAAGGCATCTCAGCCATCACCATCAGTGACGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325239.11
ENST00000465910.5
ENST00000497480.1
CDS CCA 72 bp CTTCTGCTTCCATCTGGGAGATCCTCCCTCCTGGGCTaGTTGGGACCACCCCCACCCCAGTGGAACCACCCC +
Preference number: 6 (lower is better)
Translates to: LLLPSGRSSLLG*LGPPPPQWNHP
Trigger: GGGGTGGTTCCACTGGGGTGGGGGTGGTCCCAACCAGCCCAGGAGGGAGGATCTCCCAGATGGAAGCAGAAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465910.5
CDS CAA 72 bp GTGAACTCCCTCAGCTTCCTCCGGGCGGGATGTGCCTaGGTGGGAGCCTGGAGACCCTCCACTGTGCTGTCG +
Preference number: 6 (lower is better)
Translates to: VNSLSFLRAGCA*VGAWRPSTVLS
Trigger: CGACAGCACAGTGGAGGGTCTCCAGGCTCCCACCAAGGCACATCCCGCCCGGAGGAAGCTGAGGGAGTTCAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000374161.7
CDS CAA 90 bp TGTCCATACAAGGCCTGCCGGAGGCGCAAGCCCCTCGGGCGGCCTTaGGTCATGCTGAGCTCCCACACACACACCACAGTGCTGGTCCCA +
Preference number: 6 (lower is better)
Translates to: CPYKACRRRKPLGRP*VMLSSHTHTTVLVP
Trigger: TGGGACCAGCACTGTGGTGTGTGTGTGGGAGCTCAGCATGACCAAAGGCCGCCCGAGGGGCTTGCGCCTCCGGCAGGCCTTGTATGGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325239.11
ENST00000465910.5
ENST00000497480.1
CDS GCA 72 bp AGGAAGCGCAGCGGGTGGCCCTCAGTGGCAGCTCCATaGCGGCTGATCAGGAACCAGCAGGAGAAGGTCAGA +
Preference number: 6 (lower is better)
Translates to: RKRSGWPSVAAP*RLIRNQQEKVR
Trigger: TCTGACCTTCTCCTGCTGGTTCCTGATCAGCCGGCATGGAGCTGCCACTGAGGGCCACCCGCTGCGCTTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS CCA 72 bp GTGCCGCTGGCCATGCTGTCCAGAAAGCCAAGGATCTaGAGGCAGCTCTGTATCCGGGGTGGGAGTGAGCCG +
Preference number: 6 (lower is better)
Translates to: VPLAMLSRKPRI*RQLCIRGGSEP
Trigger: CGGCTCACTCCCACCCCGGATACAGAGCTGCCTCCAGATCCTTGGCTTTCTGGACAGCATGGCCAGCGGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS CCA 72 bp GAGAAGCAAACAAAGGGTTGCTCAGTCCTGGCCAGGTaGCGCACCAACGTCAGGAAGCGCAGCGGGTGGCCC +
Preference number: 6 (lower is better)
Translates to: EKQTKGCSVLAR*RTNVRKRSGWP
Trigger: GGGCCACCCGCTGCGCTTCCTGACGTTGGTGCGCCACCTGGCCAGGACTGAGCAACCCTTTGTTTGCTTCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS CCA 72 bp CTGTGCTGTCGCCTTCAGCTGCGGCCTCAGGACTGCTaGTGTTCCGGGTGGACTCAGCCCCAACCCCCTTTT +
Preference number: 6 (lower is better)
Translates to: LCCRLQLRPQDC*CSGWTQPQPPF
Trigger: AAAAGGGGGTTGGGGCTGAGTCCACCCGGAACACCAGCAGTCCTGAGGCCGCAGCTGAAGGCGACAGCACAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000374161.7
CDS CCA 72 bp TGCAGACTTTCGTGTAAGGCTGGGAAGAAGGTCAGCTaGGTGCAGTCCACCCCCACCTCGTCCGGCTCGCCC +
Preference number: 6 (lower is better)
Translates to: CRLSCKAGKKVS*VQSTPTSSGSP
Trigger: GGGCGAGCCGGACGAGGTGGGGGTGGACTGCACCCAGCTGACCTTCTTCCCAGCCTTACACGAAAGTCTGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS CCA 72 bp AAAAGGGCTGTGGGTGGCCAGGCAGGCTCACGGGGGTaGAGACATCCTTTCCAGGCAGAGGCTTCCCTGCTG +
Preference number: 6 (lower is better)
Translates to: KRAVGGQAGSRG*RHPFQAEASLL
Trigger: CAGCAGGGAAGCCTCTGCCTGGAAAGGATGTCTCCACCCCCGTGAGCCTGCCTGGCCACCCACAGCCCTTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000465910.5
CDS CCA 72 bp CACCACAGTGCTGGTCCCAGAGGTGACAATCGTTGTTaGGGATGGGCACACGGCGCACAGACAGCGGCCCCA +
Preference number: 6 (lower is better)
Translates to: HHSAGPRGDNRC*GWAHGAQTAAP
Trigger: TGGGGCCGCTGTCTGTGCGCCGTGTGCCCATCCCCAACAACGATTGTCACCTCTGGGACCAGCACTGTGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325239.11
ENST00000465910.5
ENST00000497480.1
CDS CAA 90 bp TCCTGGAGGGAGCCTTCCAGGTCAGAGAGCAGAGACAGCAGCCCGTaGAACCCGCTGGAGACTCTGAAGGCAGCACGACCCTTGGGGGTC +
Preference number: 6 (lower is better)
Translates to: SWREPSRSESRDSSP*NPLETLKAARPLGV
Trigger: GACCCCCAAGGGTCGTGCTGCCTTCAGAGTCTCCAGCGGGTTCAACGGGCTGCTGTCTCTGCTCTCTGACCTGGAAGGCTCCCTCCAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS TCA 72 bp GGAGATGAGGCTCAGCGCCGTCTGAAGAGCAGTAGTTaGATCCTGGGATTCCCCCAAGGGCTGCGGGGCCTG +
Preference number: 6 (lower is better)
Translates to: GDEAQRRLKSSS*ILGFPQGLRGL
Trigger: CAGGCCCCGCAGCCCTTGGGGGAATCCCAGGATTCAACTACTGCTCTTCAGACGGCGCTGAGCCTCATCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS GCA 72 bp GTCAGCCACACCACCAGCCCAAGGAGCTCCTCCAGATaGGGGTCCACTTCGCTCTGGGTCAGCCCATCATAC +
Preference number: 6 (lower is better)
Translates to: VSHTTSPRSSSR*GSTSLWVSPSY
Trigger: GTATGATGGGCTGACCCAGAGCGAAGTGGACCCGCATCTGGAGGAGCTCCTTGGGCTGGTGGTGTGGCTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000360890.6
CDS GCA 72 bp TCAGGTCCCCACGCAAGTGGAGGGTGCCGCTGGCCATaGTGTCCAGAAAGCCAAGGATCTGGAGGCAGCTCT +
Preference number: 6 (lower is better)
Translates to: SGPHASGGCRWP*CPESQGSGGSS
Trigger: AGAGCTGCCTCCAGATCCTTGGCTTTCTGGACAGCATGGCCAGCGGCACCCTCCACTTGCGTGGGGACCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS GCA 72 bp AATTTCCGAGGGTCCCCATCAGCCCAGGGAGGGAGCTaGACGTCTCCTAGCACAGTCCCGTCCTGCATGCAG +
Preference number: 6 (lower is better)
Translates to: NFRGSPSAQGGS*TSPSTVPSCMQ
Trigger: CTGCATGCAGGACGGGACTGTGCTAGGAGACGTGCAGCTCCCTCCCTGGGCTGATGGGGACCCTCGGAAATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000465910.5
CDS GCA 72 bp TGTGCTCGGAGTGGCACCAGCATCTGCCAGGACTCCTaGCTCAGCGCTGGCTTGTTGCCTGCCTGTGTGACA +
Preference number: 6 (lower is better)
Translates to: CARSGTSICQDS*LSAGLLPACVT
Trigger: TGTCACACAGGCAGGCAACAAGCCAGCGCTGAGGCAGGAGTCCTGGCAGATGCTGGTGCCACTCCGAGCACA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465910.5
CDS CCA 72 bp TTGGTCCTCAGGGACTCCTTCAGGTCCCCACGCAAGTaGAGGGTGCCGCTGGCCATGCTGTCCAGAAAGCCA +
Preference number: 6 (lower is better)
Translates to: LVLRDSFRSPRK*RVPLAMLSRKP
Trigger: TGGCTTTCTGGACAGCATGGCCAGCGGCACCCTCCACTTGCGTGGGGACCTGAAGGAGTCCCTGAGGACCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS CCA 72 bp GGACCTCGGACTGGAAGTCTCGCTTCTGTTGGCTGGTaGCGTGGTCTGGAGAAGCCTCCAGGAGCACCTCCA +
Preference number: 6 (lower is better)
Translates to: GPRTGSLASVGW*RGLEKPPGAPP
Trigger: TGGAGGTGCTCCTGGAGGCTTCTCCAGACCACGCCACCAGCCAACAGAAGCGAGACTTCCAGTCCGAGGTCC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000374161.7
CDS CCA 72 bp GCAGGACCTCGGACTGGAAGTCTCGCTTCTGTTGGCTaGTGGCGTGGTCTGGAGAAGCCTCCAGGAGCACCT +
Preference number: 6 (lower is better)
Translates to: AGPRTGSLASVG*WRGLEKPPGAP
Trigger: AGGTGCTCCTGGAGGCTTCTCCAGACCACGCCACCAGCCAACAGAAGCGAGACTTCCAGTCCGAGGTCCTGC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000374161.7
CDS CCA 72 bp GCCGAGCCCTCAGGCCTGGTCCCCCTGAAAGCACGGTaGCCCCCACTGGCACCTATGTTTGGGATATTAGCT +
Preference number: 6 (lower is better)
Translates to: AEPSGLVPLKAR*PPLAPMFGILA
Trigger: AGCTAATATCCCAAACATAGGTGCCAGTGGGGGCCACCGTGCTTTCAGGGGGACCAGGCCTGAGGGCTCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000374161.7
CDS CCA 72 bp CCCAGGGACTTCAATGCAGCAGCGGATCCCCAGTCCTaGGGCAAATGGAGGCATGGTCCCCAGAGCCAAGAG +
Preference number: 6 (lower is better)
Translates to: PRDFNAAADPQS*GKWRHGPQSQE
Trigger: CTCTTGGCTCTGGGGACCATGCCTCCATTTGCCCCAGGACTGGGGATCCGCTGCTGCATTGAAGTCCCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465910.5
CDS CAA 72 bp CCCCAGGCTGTGGTGATGCTGGCCAGGGGCTGTCCATaGACATTCCACAGGGACAAGTGTGCTCCCGCACAG +
Preference number: 6 (lower is better)
Translates to: PQAVVMLARGCP*TFHRDKCAPAQ
Trigger: CTGTGCGGGAGCACACTTGTCCCTGTGGAATGTCAATGGACAGCCCCTGGCCAGCATCACCACAGCCTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325239.11
ENST00000465910.5
ENST00000497480.1
CDS CAA 90 bp CAACCGAGCTTGCTCCGCAGGCTTCCCCACAAGGGCCTTCTGGAGTaGCTGGGCAAGCTGGTCAGACACGTCTTCAGCCAGCCTTTGGAG +
Preference number: 6 (lower is better)
Translates to: QPSLLRRLPHKGLLE*LGKLVRHVFSQPLE
Trigger: CTCCAAAGGCTGGCTGAAGACGTGTCTGACCAGCTTGCCCAGCAACTCCAGAAGGCCCTTGTGGGGAAGCCTGCGGAGCAAGCTCGGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000360890.6
CDS CAA 90 bp AGCAGCCCGTTGAACCCGCTGGAGACTCTGAAGGCAGCACGACCCTaGGGGGTCACCAGGATCCGGAGCAGAGACTTCAGGAGATCCAGT +
Preference number: 6 (lower is better)
Translates to: SSPLNPLETLKAARP*GVTRIRSRDFRRSS
Trigger: ACTGGATCTCCTGAAGTCTCTGCTCCGGATCCTGGTGACCCCCAAGGGTCGTGCTGCCTTCAGAGTCTCCAGCGGGTTCAACGGGCTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS CAA 90 bp CGGAGTGGCACCAGCATCTGCCAGGACTCCTGCCTCAGCGCTGGCTaGTTGCCTGCCTGTGTGACAGACACCACTTCATGGCACTGTCAC +
Preference number: 6 (lower is better)
Translates to: RSGTSICQDSCLSAG*LPACVTDTTSWHCH
Trigger: GTGACAGTGCCATGAAGTGGTGTCTGTCACACAGGCAGGCAACAAGCCAGCGCTGAGGCAGGAGTCCTGGCAGATGCTGGTGCCACTCCG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465910.5
CDS TCA 72 bp CAACATCCCAGTGCTCCTGCAGAAAGCCCAGGATGCTaGGAAGGCCGAGGCATTCGGAGAGGGACTGCTGGG +
Preference number: 6 (lower is better)
Translates to: QHPSAPAESPGC*EGRGIRRGTAG
Trigger: CCCAGCAGTCCCTCTCCGAATGCCTCGGCCTTCTCAGCATCCTGGGCTTTCTGCAGGAGCACTGGGATGTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS TCA 72 bp GCTCCCACACACACACCACAGTGCTGGTCCCAGAGGTaGCAATCGTTGTTGGGGATGGGCACACGGCGCACA +
Preference number: 6 (lower is better)
Translates to: APTHTPQCWSQR*QSLLGMGTRRT
Trigger: TGTGCGCCGTGTGCCCATCCCCAACAACGATTGTCACCTCTGGGACCAGCACTGTGGTGTGTGTGTGGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325239.11
ENST00000465910.5
ENST00000497480.1
CDS TCA 72 bp CCTGTGCTGGGTGAAGTGGGAGAACCACCCTCTTCCTaGCCCTACCACCCAGGAGGAAGAGAGGGAGCAGGA +
Preference number: 6 (lower is better)
Translates to: PVLGEVGEPPSS*PYHPGGREGAG
Trigger: TCCTGCTCCCTCTCTTCCTCCTGGGTGGTAGGGTCAGGAAGAGGGTGGTTCTCCCACTTCACCCAGCACAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465910.5
CDS GCA 72 bp TCAGGGACTCCTTCAGGTCCCCACGCAAGTGGAGGGTaGCGCTGGCCATGCTGTCCAGAAAGCCAAGGATCT +
Preference number: 6 (lower is better)
Translates to: SGTPSGPHASGG*RWPCCPESQGS
Trigger: AGATCCTTGGCTTTCTGGACAGCATGGCCAGCGGCACCCTCCACTTGCGTGGGGACCTGAAGGAGTCCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS GCA 72 bp CCTGTGGCAGGAGGCCATGAGGGTCCCAAGCAAGCCTaGTTCGCACATGACCTGGCGGTTCTTCTCCGACTT +
Preference number: 6 (lower is better)
Translates to: PVAGGHEGPKQA*FAHDLAVLLRL
Trigger: AAGTCGGAGAAGAACCGCCAGGTCATGTGCGAAGCAGGCTTGCTTGGGACCCTCATGGCCTCCTGCCACAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS GCA 72 bp ATCCACGCCCTCAGTGCTGCGTTCCACCCAGGATCCTaGACACAGGCCATCTCTAAACCGTGTGCGGAGGGA +
Preference number: 6 (lower is better)
Translates to: IHALSAAFHPGS*TQAISKPCAEG
Trigger: TCCCTCCGCACACGGTTTAGAGATGGCCTGTGTGCAGGATCCTGGGTGGAACGCAGCACTGAGGGCGTGGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000374161.7
CDS GCA 72 bp ATGTCCCTTTCCATGAGGGCAGGGGCTGTGCCTGACTaGCCAGGGACTTCAATGCAGCAGCGGATCCCCAGT +
Preference number: 6 (lower is better)
Translates to: MSLSMRAGAVPD*PGTSMQQRIPS
Trigger: ACTGGGGATCCGCTGCTGCATTGAAGTCCCTGGGCAGTCAGGCACAGCCCCTGCCCTCATGGAAAGGGACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465910.5
CDS GCA 72 bp TCGGCCATGGAGAGGGTTGGGCTGCAGAGCTGTGATTaGCAGAGGCCCTTCCTTGAGAACTGGACACGGCCA +
Preference number: 6 (lower is better)
Translates to: SAMERVGLQSCD*QRPFLENWTRP
Trigger: TGGCCGTGTCCAGTTCTCAAGGAAGGGCCTCTGGCAATCACAGCTCTGCAGCCCAACCCTCTCCATGGCCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490507.1
CDS CCA 72 bp TCCGCAGGCTTCCCCACAAGGGCCTTCTGGAGTTGCTaGGCAAGCTGGTCAGACACGTCTTCAGCCAGCCTT +
Preference number: 6 (lower is better)
Translates to: SAGFPTRAFWSC*ASWSDTSSASL
Trigger: AAGGCTGGCTGAAGACGTGTCTGACCAGCTTGCCCAGCAACTCCAGAAGGCCCTTGTGGGGAAGCCTGCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000360890.6
CDS CCA 72 bp CGAGCTTGCTCCGCAGGCTTCCCCACAAGGGCCTTCTaGAGTTGCTGGGCAAGCTGGTCAGACACGTCTTCA +
Preference number: 6 (lower is better)
Translates to: RACSAGFPTRAF*SCWASWSDTSS
Trigger: TGAAGACGTGTCTGACCAGCTTGCCCAGCAACTCCAGAAGGCCCTTGTGGGGAAGCCTGCGGAGCAAGCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000360890.6
CDS CAA 72 bp TTGCTCCGCAGGCTTCCCCACAAGGGCCTTCTGGAGTaGCTGGGCAAGCTGGTCAGACACGTCTTCAGCCAG +
Preference number: 6 (lower is better)
Translates to: LLRRLPHKGLLE*LGKLVRHVFSQ
Trigger: CTGGCTGAAGACGTGTCTGACCAGCTTGCCCAGCAACTCCAGAAGGCCCTTGTGGGGAAGCCTGCGGAGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000360890.6
CDS CAA 72 bp TTGAACCCGCTGGAGACTCTGAAGGCAGCACGACCCTaGGGGGTCACCAGGATCCGGAGCAGAGACTTCAGG +
Preference number: 6 (lower is better)
Translates to: LNPLETLKAARP*GVTRIRSRDFR
Trigger: CCTGAAGTCTCTGCTCCGGATCCTGGTGACCCCCAAGGGTCGTGCTGCCTTCAGAGTCTCCAGCGGGTTCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS TCA 72 bp CAGCAACCCTGCCCAGCGTCTCCGAGTCTGTCCCCGTaGGCACGTACACTGACTTCAGGAGCAAGTAGCCAT +
Preference number: 6 (lower is better)
Translates to: QQPCPASPSLSP*ARTLTSGASSH
Trigger: ATGGCTACTTGCTCCTGAAGTCAGTGTACGTGCTCACGGGGACAGACTCGGAGACGCTGGGCAGGGTTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000360890.6
CDS TCA 72 bp AGAAGTGTTCCTGCACTGGGGCCGGCTTCAGGGGCATaGTCTCTACAAACTGCGAGATGGGCTGCAGGGTCC +
Preference number: 6 (lower is better)
Translates to: RSVPALGPASGA*SLQTARWAAGS
Trigger: GGACCCTGCAGCCCATCTCGCAGTTTGTAGAGATCATGCCCCTGAAGCCGGCCCCAGTGCAGGAACACTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000360890.6
CDS TCA 72 bp GTCCTTGGCCTGCCGCCCGGGCATCAGCTTCATGGCTaGGGACAGGCTTCCACTCCACAAAGTGACTTTGCT +
Preference number: 6 (lower is better)
Translates to: VLGLPPGHQLHG*GQASTPQSDFA
Trigger: AGCAAAGTCACTTTGTGGAGTGGAAGCCTGTCCTCAGCCATGAAGCTGATGCCCGGGCGGCAGGCCAAGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS GCA 72 bp ACGCAGAAGGTGGGTTCCTTCCAGAAGCAGCAGCTGTaGTCCCGAAGGCAGGTCGTGGCAATCAGCAGAGAC +
Preference number: 6 (lower is better)
Translates to: TQKVGSFQKQQL*SRRQVVAISRD
Trigger: GTCTCTGCTGATTGCCACGACCTGCCTTCGGGAGCACAGCTGCTGCTTCTGGAAGGAACCCACCTTCTGCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000360890.6
CDS GCA 72 bp GGACATGTCAAATTCCACAAACGATGGGGCCAGGGCTaGCCTCTGAGGCTGCAGGTTGCGTGGGGAGGTCAT +
Preference number: 6 (lower is better)
Translates to: GHVKFHKRWGQG*PLRLQVAWGGH
Trigger: ATGACCTCCCCACGCAACCTGCAGCCTCAGAGGGCAGCCCTGGCCCCATCGTTTGTGGAATTTGACATGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS GCA 72 bp CTGCCAGGACTCCTGCCTCAGCGCTGGCTTGTTGCCTaGCTGTGTGACAGACACCACTTCATGGCACTGTCA +
Preference number: 6 (lower is better)
Translates to: LPGLLPQRWLVA*LCDRHHFMALS
Trigger: TGACAGTGCCATGAAGTGGTGTCTGTCACACAGGCAGGCAACAAGCCAGCGCTGAGGCAGGAGTCCTGGCAG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465910.5
CDS CCA 72 bp ACTTCCTTTCCAGCATGTCCCAGAGAGCTGTGGGGCTaGAGGACTGCCCTCCATGTGGGACATCAGGCTGCA +
Preference number: 6 (lower is better)
Translates to: TSFPACPRELWG*RTALHVGHQAA
Trigger: TGCAGCCTGATGTCCCACATGGAGGGCAGTCCTCCAGCCCCACAGCTCTCTGGGACATGCTGGAAAGGAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000360890.6
CDS CCA 72 bp GCTGAGGATGCTCTGCAGGGCCATGAGGGTGCAGGATaGCCCAGGGCTCTCCTTGATCAGATGCTGTACCTT +
Preference number: 6 (lower is better)
Translates to: AEDALQGHEGAG*PRALLDQMLYL
Trigger: AAGGTACAGCATCTGATCAAGGAGAGCCCTGGGCCATCCTGCACCCTCATGGCCCTGCAGAGCATCCTCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000360890.6
CDS CCA 72 bp CCAGAAAGTACAGCAGCAGCTTCAATGCCAGCACAGTaGTGCTGGCATGCAGGTGGCCCTGCAGGAGCAGCA +
Preference number: 6 (lower is better)
Translates to: PESTAAASMPAQ*CWHAGGPAGAA
Trigger: TGCTGCTCCTGCAGGGCCACCTGCATGCCAGCACCACTGTGCTGGCATTGAAGCTGCTGCTGTACTTTCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000374161.7
CDS CCA 72 bp TCTCTGGAGGCCGACTCCCACGTGCTCTTCACACTGTaGAACATTCTGTCTGCCACGTCGAAGCTTCCGCCC +
Preference number: 6 (lower is better)
Translates to: SLEADSHVLFTL*NILSATSKLPP
Trigger: GGGCGGAAGCTTCGACGTGGCAGACAGAATGTTCCACAGTGTGAAGAGCACGTGGGAGTCGGCCTCCAGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000465910.5
CDS CCA 72 bp ACTCCCGGTGATGATGATCTGGCTTGTGTCCCATGCTaGGCCCTCCATCAGGCAGCAGCAGGTTATGGCTCC +
Preference number: 6 (lower is better)
Translates to: TPGDDDLACVPC*ALHQAAAGYGS
Trigger: GGAGCCATAACCTGCTGCTGCCTGATGGAGGGCCCAGCATGGGACACAAGCCAGATCATCATCACCGGGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000465910.5
CDS CAA 72 bp CCCTCATCCATCCTCTCCTCCAGGTCTGGCCACTGCTaGAAGTTGCGTTGGGGGTCACTGCCAGTTTCTCCC +
Preference number: 6 (lower is better)
Translates to: PSSILSSRSGHC*KLRWGSLPVSP
Trigger: GGGAGAAACTGGCAGTGACCCCCAACGCAACTTCAAGCAGTGGCCAGACCTGGAGGAGAGGATGGATGAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS CAA 72 bp AGAAAGCAGGACCTCGGACTGGAAGTCTCGCTTCTGTaGGCTGGTGGCGTGGTCTGGAGAAGCCTCCAGGAG +
Preference number: 6 (lower is better)
Translates to: RKQDLGLEVSLL*AGGVVWRSLQE
Trigger: CTCCTGGAGGCTTCTCCAGACCACGCCACCAGCCAACAGAAGCGAGACTTCCAGTCCGAGGTCCTGCTTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000374161.7
CDS CAA 72 bp AGCATCTGCCAGGACTCCTGCCTCAGCGCTGGCTTGTaGCCTGCCTGTGTGACAGACACCACTTCATGGCAC +
Preference number: 6 (lower is better)
Translates to: SICQDSCLSAGL*PACVTDTTSWH
Trigger: GTGCCATGAAGTGGTGTCTGTCACACAGGCAGGCAACAAGCCAGCGCTGAGGCAGGAGTCCTGGCAGATGCT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465910.5
CDS CAA 72 bp ACCAGCATCTGCCAGGACTCCTGCCTCAGCGCTGGCTaGTTGCCTGCCTGTGTGACAGACACCACTTCATGG +
Preference number: 6 (lower is better)
Translates to: TSICQDSCLSAG*LPACVTDTTSW
Trigger: CCATGAAGTGGTGTCTGTCACACAGGCAGGCAACAAGCCAGCGCTGAGGCAGGAGTCCTGGCAGATGCTGGT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465910.5
CDS CAA 90 bp TTCCATAGCAGAAAGCAGGACCTCGGACTGGAAGTCTCGCTTCTGTaGGCTGGTGGCGTGGTCTGGAGAAGCCTCCAGGAGCACCTCCAG +
Preference number: 6 (lower is better)
Translates to: FHSRKQDLGLEVSLL*AGGVVWRSLQEHLQ
Trigger: CTGGAGGTGCTCCTGGAGGCTTCTCCAGACCACGCCACCAGCCAACAGAAGCGAGACTTCCAGTCCGAGGTCCTGCTTTCTGCTATGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000374161.7
CDS CAA 90 bp AGTGGCACCAGCATCTGCCAGGACTCCTGCCTCAGCGCTGGCTTGTaGCCTGCCTGTGTGACAGACACCACTTCATGGCACTGTCACAAG +
Preference number: 6 (lower is better)
Translates to: SGTSICQDSCLSAGL*PACVTDTTSWHCHK
Trigger: CTTGTGACAGTGCCATGAAGTGGTGTCTGTCACACAGGCAGGCAACAAGCCAGCGCTGAGGCAGGAGTCCTGGCAGATGCTGGTGCCACT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465910.5
CDS CAA 90 bp GTGTGGTTTCTGGACACGGCCAGAGCAGTCACTGCGGGGCTGGTTTaGCTGGGCTTCCCTGTCAAAGCAATGCTAACGTCCAGCTCTCGA +
Preference number: 6 (lower is better)
Translates to: VWFLDTARAVTAGLV*LGFPVKAMLTSSSR
Trigger: TCGAGAGCTGGACGTTAGCATTGCTTTGACAGGGAAGCCCAGCAAAACCAGCCCCGCAGTGACTGCTCTGGCCGTGTCCAGAAACCACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000465910.5
CDS TCA 72 bp CAGCGTCTCCGAGTCTGTCCCCGTGAGCACGTACACTaGCTTCAGGAGCAAGTAGCCATCCTGATCCACGTC +
Preference number: 6 (lower is better)
Translates to: QRLRVCPREHVH*LQEQVAILIHV
Trigger: GACGTGGATCAGGATGGCTACTTGCTCCTGAAGTCAGTGTACGTGCTCACGGGGACAGACTCGGAGACGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000360890.6
CDS TCA 72 bp AAGTTGCGTTGGGGGTCACTGCCAGTTTCTCCCTTCTaGACATCCACAACCGGCCCCTGCTTGGTCCTCAGG +
Preference number: 6 (lower is better)
Translates to: KLRWGSLPVSPF*TSTTGPCLVLR
Trigger: CCTGAGGACCAAGCAGGGGCCGGTTGTGGATGTTCAGAAGGGAGAAACTGGCAGTGACCCCCAACGCAACTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS TCA 72 bp CTGAGCAAGTCCTGGGTGCTGAAGTGGCCCCTCAGCTaGCAGGCCAGGATGCCAATGATGGTGGAGATCTTG +
Preference number: 6 (lower is better)
Translates to: LSKSWVLKWPLS*QARMPMMVEIL
Trigger: CAAGATCTCCACCATCATTGGCATCCTGGCCTGTCAGCTGAGGGGCCACTTCAGCACCCAGGACTTGCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000374161.7
CDS TCA 72 bp ACTCAGGCAGGTAGAAGAACTCTGGGGTCAGCTCCCTaGCGTCACTCATGTTCTCTCTGGAGGCCGACTCCC +
Preference number: 6 (lower is better)
Translates to: TQAGRRTLGSAP*RHSCSLWRPTP
Trigger: GGGAGTCGGCCTCCAGAGAGAACATGAGTGACGTCAGGGAGCTGACCCCAGAGTTCTTCTACCTGCCTGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000465910.5
CDS TCA 72 bp ACTCCTGCCTCAGCGCTGGCTTGTTGCCTGCCTGTGTaGCAGACACCACTTCATGGCACTGTCACAAGCCTG +
Preference number: 6 (lower is better)
Translates to: TPASALACCLPV*QTPLHGTVTSL
Trigger: CAGGCTTGTGACAGTGCCATGAAGTGGTGTCTGTCACACAGGCAGGCAACAAGCCAGCGCTGAGGCAGGAGT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465910.5
CDS GCA 72 bp CAGGCCATCTCTAAACCGTGTGCGGAGGGAGGGGCTTaGCAGAAAGTACAGCAGCAGCTTCAATGCCAGCAC +
Preference number: 6 (lower is better)
Translates to: QAISKPCAEGGA*QKVQQQLQCQH
Trigger: GTGCTGGCATTGAAGCTGCTGCTGTACTTTCTGGCAAGCCCCTCCCTCCGCACACGGTTTAGAGATGGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000374161.7
CDS GCA 72 bp GAGAGATCGATCTTGAAGGCATCCTCCAGGGTCTGCTaGCTTTGTGCCACCAGCTGCTGCCAGAGAGTCTGC +
Preference number: 6 (lower is better)
Translates to: ERSILKASSRVC*LCATSCCQRVC
Trigger: GCAGACTCTCTGGCAGCAGCTGGTGGCACAAAGGCAGCAGACCCTGGAGGATGCCTTCAAGATCGATCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS GCA 72 bp TTGACTCCCGGTGATGATGATCTGGCTTGTGTCCCATaGTGGGCCCTCCATCAGGCAGCAGCAGGTTATGGC +
Preference number: 6 (lower is better)
Translates to: LTPGDDDLACVP*WALHQAAAGYG
Trigger: GCCATAACCTGCTGCTGCCTGATGGAGGGCCCAGCATGGGACACAAGCCAGATCATCATCACCGGGAGTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000465910.5
CDS CCA 72 bp TTCCCCACAAGGGCCTTCTGGAGTTGCTGGGCAAGCTaGTCAGACACGTCTTCAGCCAGCCTTTGGAGACTG +
Preference number: 6 (lower is better)
Translates to: FPTRAFWSCWAS*SDTSSASLWRL
Trigger: CAGTCTCCAAAGGCTGGCTGAAGACGTGTCTGACCAGCTTGCCCAGCAACTCCAGAAGGCCCTTGTGGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000360890.6
CDS CCA 72 bp TCCAGAAGCAGCAGCTGTGCTCCCGAAGGCAGGTCGTaGCAATCAGCAGAGACTGCAGCTCACTTCCTGAGA +
Preference number: 6 (lower is better)
Translates to: SRSSSCAPEGRS*QSAETAAHFLR
Trigger: TCTCAGGAAGTGAGCTGCAGTCTCTGCTGATTGCCACGACCTGCCTTCGGGAGCACAGCTGCTGCTTCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000360890.6
CDS CCA 72 bp TCTGGGCCTTGGAGATTGCCCTTAGCACGCAGAAGGTaGGTTCCTTCCAGAAGCAGCAGCTGTGCTCCCGAA +
Preference number: 6 (lower is better)
Translates to: SGPWRLPLARRR*VPSRSSSCAPE
Trigger: TTCGGGAGCACAGCTGCTGCTTCTGGAAGGAACCCACCTTCTGCGTGCTAAGGGCAATCTCCAAGGCCCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000360890.6
CDS CCA 72 bp GCAACAGCTCCAATGGTCCGCAGAGACCCTGACAGGTaGCCAGCACAATTCCTCAGCAAGAACACGGGCATG +
Preference number: 6 (lower is better)
Translates to: ATAPMVRRDPDR*PAQFLSKNTGM
Trigger: CATGCCCGTGTTCTTGCTGAGGAATTGTGCTGGCCACCTGTCAGGGTCTCTGCGGACCATTGGAGCTGTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS CCA 72 bp CCCTCACCCCTAATTGACCCACAGCAACAGCTCCAATaGTCCGCAGAGACCCTGACAGGTGGCCAGCACAAT +
Preference number: 6 (lower is better)
Translates to: PSPLIDPQQQLQ*SAETLTGGQHN
Trigger: ATTGTGCTGGCCACCTGTCAGGGTCTCTGCGGACCATTGGAGCTGTTGCTGTGGGTCAATTAGGGGTGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS CCA 72 bp ATGACACAAAATCCTCTGTCTTGCACTCAGGGTCCTTaGCCTGCCGCCCGGGCATCAGCTTCATGGCTGAGG +
Preference number: 6 (lower is better)
Translates to: MTQNPLSCTQGP*PAARASASWLR
Trigger: CCTCAGCCATGAAGCTGATGCCCGGGCGGCAGGCCAAGGACCCTGAGTGCAAGACAGAGGATTTTGTGTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS CCA 72 bp CATTCGAGCTGGTCCTTCTCTCCAGTCGAGTTCCCATaGGGAACAGGGCTTGGTTTCTTCCCCCTGGCTCCA +
Preference number: 6 (lower is better)
Translates to: HSSWSFSPVEFP*GTGLGFFPLAP
Trigger: TGGAGCCAGGGGGAAGAAACCAAGCCCTGTTCCCCATGGGAACTCGACTGGAGAGAAGGACCAGCTCGAATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS CCA 72 bp TGGTGGCCAAAAAGCAGGACCCCTTCTGACACCAGGTaGCCCTGCACAATCACCAGGGAGAACTTCTGCGTC +
Preference number: 6 (lower is better)
Translates to: WWPKSRTPSDTR*PCTITRENFCV
Trigger: GACGCAGAAGTTCTCCCTGGTGATTGTGCAGGGCCACCTGGTGTCAGAAGGGGTCCTGCTTTTTGGCCACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS CAA 72 bp TGCTGTCAAACACCTTCAGCTCTGACCTCCCACAGGTaGTCAGCCACACCACCAGCCCAAGGAGCTCCTCCA +
Preference number: 6 (lower is better)
Translates to: CCQTPSALTSHR*SATPPAQGAPP
Trigger: TGGAGGAGCTCCTTGGGCTGGTGGTGTGGCTGACAACCTGTGGGAGGTCAGAGCTGAAGGTGTTTGACAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000360890.6
CDS CAA 72 bp CATGACACAAAATCCTCTGTCTTGCACTCAGGGTCCTaGGCCTGCCGCCCGGGCATCAGCTTCATGGCTGAG +
Preference number: 6 (lower is better)
Translates to: HDTKSSVLHSGS*ACRPGISFMAE
Trigger: CTCAGCCATGAAGCTGATGCCCGGGCGGCAGGCCAAGGACCCTGAGTGCAAGACAGAGGATTTTGTGTCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS CAA 90 bp CAGTCTGTGGCCTGCAGGTACTGGATGATGCTGAGGTTCTGGGCCTaGGAGATTGCCCTTAGCACGCAGAAGGTGGGTTCCTTCCAGAAG +
Preference number: 6 (lower is better)
Translates to: QSVACRYWMMLRFWA*EIALSTQKVGSFQK
Trigger: CTTCTGGAAGGAACCCACCTTCTGCGTGCTAAGGGCAATCTCCAAGGCCCAGAACCTCAGCATCATCCAGTACCTGCAGGCCACAGACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000360890.6
CDS TCA 72 bp CTGAGGGTAAGTGATGCTGTCAAACACCTTCAGCTCTaGCCTCCCACAGGTTGTCAGCCACACCACCAGCCC +
Preference number: 6 (lower is better)
Translates to: LRVSDAVKHLQL*PPTGCQPHHQP
Trigger: GGGCTGGTGGTGTGGCTGACAACCTGTGGGAGGTCAGAGCTGAAGGTGTTTGACAGCATCACTTACCCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000360890.6
CDS TCA 72 bp ACCCACAGCAACAGCTCCAATGGTCCGCAGAGACCCTaGCAGGTGGCCAGCACAATTCCTCAGCAAGAACAC +
Preference number: 6 (lower is better)
Translates to: THSNSSNGPQRP*QVASTIPQQEH
Trigger: GTGTTCTTGCTGAGGAATTGTGCTGGCCACCTGTCAGGGTCTCTGCGGACCATTGGAGCTGTTGCTGTGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS TCA 72 bp GTATGTGGTGCTGGACCTCCAGAGGAACCCAGCCACTaGAGGGACAACCCTGGGACAGGACACCAAACAATG +
Preference number: 6 (lower is better)
Translates to: VCGAGPPEEPSH*RDNPGTGHQTM
Trigger: CATTGTTTGGTGTCCTGTCCCAGGGTTGTCCCTTCAGTGGCTGGGTTCCTCTGGAGGTCCAGCACCACATAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465910.5
CDS GCA 72 bp GTGCTCCAGGATGAAGAGGAGGATATGCCTGGGGTCTaGCGAGAACATCCCACTGTACAGCTTCTCCACCAG +
Preference number: 6 (lower is better)
Translates to: VLQDEEEDMPGV*REHPTVQLLHQ
Trigger: CTGGTGGAGAAGCTGTACAGTGGGATGTTCTCGGCAGACCCCAGGCATATCCTCCTCTTCATCCTGGAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000374161.7
CDS GCA 72 bp GGAAGCAGTAGGACTGGAATGCACTCCTGGGCCATCTaGCCCAGAGCACATGTTCTTAGCTACTGGCTGCCT +
Preference number: 6 (lower is better)
Translates to: GSSRTGMHSWAI*PRAHVLSYWLP
Trigger: AGGCAGCCAGTAGCTAAGAACATGTGCTCTGGGGCAGATGGCCCAGGAGTGCATTCCAGTCCTACTGCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465910.5
CDS GCA 72 bp CCAAGGTCACACAGTCAGGAAGCAGTAGGACTGGAATaGACTCCTGGGCCATCTGCCCCAGAGCACATGTTC +
Preference number: 6 (lower is better)
Translates to: PRSHSQEAVGLE*TPGPSAPEHMF
Trigger: GAACATGTGCTCTGGGGCAGATGGCCCAGGAGTGCATTCCAGTCCTACTGCTTCCTGACTGTGTGACCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465910.5
CDS CCA 72 bp CCAAGGAGCTCCTCCAGATGCGGGTCCACTTCGCTCTaGGTCAGCCCATCATACCGAAGTAACACTTTGAGC +
Preference number: 6 (lower is better)
Translates to: PRSSSRCGSTSL*VSPSYRSNTLS
Trigger: GCTCAAAGTGTTACTTCGGTATGATGGGCTGACCCAGAGCGAAGTGGACCCGCATCTGGAGGAGCTCCTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000360890.6
CDS CCA 72 bp GGTTCTTCTCCGACTTCACCAGGGACTGGATATGACTaGCCAGGGAGCACTGGATCTCCTCGGAAAGCTGTG +
Preference number: 6 (lower is better)
Translates to: GSSPTSPGTGYD*PGSTGSPRKAV
Trigger: CACAGCTTTCCGAGGAGATCCAGTGCTCCCTGGCCAGTCATATCCAGTCCCTGGTGAAGTCGGAGAAGAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS CCA 72 bp ATGAGGGTCCCAAGCAAGCCTGCTTCGCACATGACCTaGCGGTTCTTCTCCGACTTCACCAGGGACTGGATA +
Preference number: 6 (lower is better)
Translates to: MRVPSKPASHMT*RFFSDFTRDWI
Trigger: TATCCAGTCCCTGGTGAAGTCGGAGAAGAACCGCCAGGTCATGTGCGAAGCAGGCTTGCTTGGGACCCTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS CCA 72 bp ACCTCCAGAGGAACCCAGCCACTGAAGGGACAACCCTaGGACAGGACACCAAACAATGCATGGCCAGGGAAT +
Preference number: 6 (lower is better)
Translates to: TSRGTQPLKGQP*DRTPNNAWPGN
Trigger: ATTCCCTGGCCATGCATTGTTTGGTGTCCTGTCCCAGGGTTGTCCCTTCAGTGGCTGGGTTCCTCTGGAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465910.5
CDS CAA 90 bp AGGGCTCCGTCCATGCAGATCTGCCTCTCATTCACCGACGAAGGCTaGAGGGTGTACACAACAAACAGCCCAATCCTGAGCAAGTCCTGG +
Preference number: 6 (lower is better)
Translates to: RAPSMQICLSFTDEG*RVYTTNSPILSKSW
Trigger: CCAGGACTTGCTCAGGATTGGGCTGTTTGTTGTGTACACCCTCAAGCCTTCGTCGGTGAATGAGAGGCAGATCTGCATGGACGGAGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000374161.7
CDS CAA 90 bp CACAGAGAGATCGATCTTGAAGGCATCCTCCAGGGTCTGCTGCCTTaGTGCCACCAGCTGCTGCCAGAGAGTCTGCACTGTCTTCTGGAT +
Preference number: 6 (lower is better)
Translates to: HREIDLEGILQGLLP*CHQLLPESLHCLLD
Trigger: ATCCAGAAGACAGTGCAGACTCTCTGGCAGCAGCTGGTGGCACAAAGGCAGCAGACCCTGGAGGATGCCTTCAAGATCGATCTCTCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS TCA 72 bp GTAGAAGTGTTGGTGGCCAAAAAGCAGGACCCCTTCTaGCACCAGGTGGCCCTGCACAATCACCAGGGAGAA +
Preference number: 6 (lower is better)
Translates to: VEVLVAKKQDPF*HQVALHNHQGE
Trigger: TTCTCCCTGGTGATTGTGCAGGGCCACCTGGTGTCAGAAGGGGTCCTGCTTTTTGGCCACCAACACTTCTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS TCA 72 bp GAAACTGTGAAGAGGCCCAGTCCTGAGGTCTGTGGGTaGCTCTGCAGTCAGAAGGGTGCTGGGAGCCAATTT +
Preference number: 6 (lower is better)
Translates to: ETVKRPSPEVCG*LCSQKGAGSQF
Trigger: AAATTGGCTCCCAGCACCCTTCTGACTGCAGAGTCACCCACAGACCTCAGGACTGGGCCTCTTCACAGTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374161.7
CDS TCA 72 bp GAAGATGGCTCTAGAAACTGTGAAGAGGCCCAGTCCTaGGGTCTGTGGGTGACTCTGCAGTCAGAAGGGTGC +
Preference number: 6 (lower is better)
Translates to: EDGSRNCEEAQS*GLWVTLQSEGC
Trigger: GCACCCTTCTGACTGCAGAGTCACCCACAGACCTCAGGACTGGGCCTCTTCACAGTTTCTAGAGCCATCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374161.7
CDS TCA 72 bp CCACCCCAGTGGACTCCTGCTTCTATAGAGCCTCTCTaGGCCTTGGTGGCAGCCAAGGAAGCCACTGAATTA +
Preference number: 6 (lower is better)
Translates to: PPQWTPASIEPL*ALVAAKEATEL
Trigger: TAATTCAGTGGCTTCCTTGGCTGCCACCAAGGCTCAGAGAGGCTCTATAGAAGCAGGAGTCCACTGGGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465910.5
CDS GCA 72 bp ACTGAAGGGACAACCCTGGGACAGGACACCAAACAATaGATGGCCAGGGAATCACCTTTGACCGTGACCTGG +
Preference number: 6 (lower is better)
Translates to: TEGTTLGQDTKQ*MARESPLTVTW
Trigger: CCAGGTCACGGTCAAAGGTGATTCCCTGGCCATGCATTGTTTGGTGTCCTGTCCCAGGGTTGTCCCTTCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465910.5
CDS GCA 72 bp CAAAGTCAGTCCCCAATACTTTGCCCAGGTATGTGGTaGTGGACCTCCAGAGGAACCCAGCCACTGAAGGGA +
Preference number: 6 (lower is better)
Translates to: QSQSPILCPGMW*WTSRGTQPLKG
Trigger: TCCCTTCAGTGGCTGGGTTCCTCTGGAGGTCCAGCACCACATACCTGGGCAAAGTATTGGGGACTGACTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465910.5
CDS CCA 72 bp CAGGACCCGTGGCTGGTAAGATCTGCATCAGTCTCCTaGAGCCCACATGGGAGATTTGAGCTCCCTTGTTAC +
Preference number: 6 (lower is better)
Translates to: QDPWLVRSASVS*SPHGRFELPCY
Trigger: GTAACAAGGGAGCTCAAATCTCCCATGTGGGCTCCAGGAGACTGATGCAGATCTTACCAGCCACGGGTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465910.5
CDS CAA 72 bp CACATCCTCAGTCTTCCAAACCCGGACCATGCCGTCTaGACTCCCGGTGATGATGATCTGGCTTGTGTCCCA +
Preference number: 6 (lower is better)
Translates to: HILSLPNPDHAV*TPGDDDLACVP
Trigger: TGGGACACAAGCCAGATCATCATCACCGGGAGTCAAGACGGCATGGTCCGGGTTTGGAAGACTGAGGATGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000465910.5
CDS CAA 90 bp GACAGGTGGCCAGCACAATTCCTCAGCAAGAACACGGGCATGGCATaGTCACGGGATGAAATGTTCATCTCTTTGGCGATCAGGCGGCTG +
Preference number: 6 (lower is better)
Translates to: DRWPAQFLSKNTGMA*SRDEMFISLAIRRL
Trigger: CAGCCGCCTGATCGCCAAAGAGATGAACATTTCATCCCGTGACAATGCCATGCCCGTGTTCTTGCTGAGGAATTGTGCTGGCCACCTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS CAA 90 bp TCCTTGTGCCTTCCTGAGCTCAGGGCCTCCAAAGGAGACAAGCGTTaGATGCGTTTCCTCATTCGAGCTGGTCCTTCTCTCCAGTCGAGT +
Preference number: 6 (lower is better)
Translates to: SLCLPELRASKGDKR*MRFLIRAGPSLQSS
Trigger: ACTCGACTGGAGAGAAGGACCAGCTCGAATGAGGAAACGCATCAAACGCTTGTCTCCTTTGGAGGCCCTGAGCTCAGGAAGGCACAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS CAA 90 bp TTGGGCACCTGTCCAAAGTTGCTGACAAACCCCAGGATGGTGCTTTaGATGAGGGGGTCAGTGATGCTGCTGAGGTCCATTCTGTCACCG +
Preference number: 6 (lower is better)
Translates to: LGTCPKLLTNPRMVL*MRGSVMLLRSILSP
Trigger: CGGTGACAGAATGGACCTCAGCAGCATCACTGACCCCCTCATCAAAAGCACCATCCTGGGGTTTGTCAGCAACTTTGGACAGGTGCCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000465910.5
CDS TCA 72 bp CGTCTTCAGCCAGCCTTTGGAGACTGGGAAAGCAGATaGTCCCCACGGAGTGTTCCCAGGCCTTTAGGAATA +
Preference number: 6 (lower is better)
Translates to: RLQPAFGDWESR*SPRSVPRPLGI
Trigger: TATTCCTAAAGGCCTGGGAACACTCCGTGGGGATCATCTGCTTTCCCAGTCTCCAAAGGCTGGCTGAAGACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000360890.6
CDS TCA 72 bp TTCCTGAGCTCAGGGCCTCCAAAGGAGACAAGCGTTTaGTGCGTTTCCTCATTCGAGCTGGTCCTTCTCTCC +
Preference number: 6 (lower is better)
Translates to: FLSSGPPKETSV*CVSSFELVLLS
Trigger: GGAGAGAAGGACCAGCTCGAATGAGGAAACGCATCAAACGCTTGTCTCCTTTGGAGGCCCTGAGCTCAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS TCA 72 bp GGAGCAGGATTCAGGAAAGGCTCCAGGATAAGACTGTaGGATGTCTCTCCCCATAGGGAAGGGACTGTGGCA +
Preference number: 6 (lower is better)
Translates to: GAGFRKGSRIRL*DVSPHREGTVA
Trigger: TGCCACAGTCCCTTCCCTATGGGGAGAGACATCTCACAGTCTTATCCTGGAGCCTTTCCTGAATCCTGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465910.5
CDS GCA 72 bp TTCTGTCTTCAGCCTTTGAAAGATCTTCTGCCTCCATaGCGTGGCAAAGCAGATCTGGAGGGGTGGCCGTCA +
Preference number: 6 (lower is better)
Translates to: FCLQPLKDLLPP*RGKADLEGWPS
Trigger: TGACGGCCACCCCTCCAGATCTGCTTTGCCACGGCATGGAGGCAGAAGATCTTTCAAAGGCTGAAGACAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000360890.6
CDS GCA 72 bp TTCAGGGGCATGATCTCTACAAACTGCGAGATGGGCTaGAGGGTCCACTCCAGCAGGAAGAAGTTTCGAGCA +
Preference number: 6 (lower is better)
Translates to: FRGMISTNCEMG*RVHSSRKKFRA
Trigger: TGCTCGAAACTTCTTCCTGCTGGAGTGGACCCTGCAGCCCATCTCGCAGTTTGTAGAGATCATGCCCCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000360890.6
CDS GCA 72 bp GACACTTTGTTTCCTGACTTCCTCATGATCTTGGCTTaGTTCCGAAGCTGTGCCAGTAGCAGGCCCAGGAGC +
Preference number: 6 (lower is better)
Translates to: DTLFPDFLMILA*FRSCASSRPRS
Trigger: GCTCCTGGGCCTGCTACTGGCACAGCTTCGGAAGCAAGCCAAGATCATGAGGAAGTCAGGAAACAAAGTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000360890.6
CDS GCA 72 bp TCTTCAGGTTGTCCATTACAATATCCACGCCCTCAGTaGTGCGTTCCACCCAGGATCCTGCACACAGGCCAT +
Preference number: 6 (lower is better)
Translates to: SSGCPLQYPRPQ*CVPPRILHTGH
Trigger: ATGGCCTGTGTGCAGGATCCTGGGTGGAACGCAGCACTGAGGGCGTGGATATTGTAATGGACAACCTGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000374161.7
CDS GCA 72 bp AAAAAGCTGCTCCTGGATCCTGGCCCAGGCGTTGGCTaGCTTGATGTTGCCACATTTTCGCCTTTGCACATG +
Preference number: 6 (lower is better)
Translates to: KKLLLDPGPGVG*LDVATFSPLHM
Trigger: CATGTGCAAAGGCGAAAATGTGGCAACATCAAGGCAGCCAACGCCTGGGCCAGGATCCAGGAGCAGCTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS GCA 72 bp CAGTCCCGTCCTGCATGCAGCCGAACTCTACCCCGTTaGAGTTGGTTAAGAACTCAGGCAGGTAGAAGAACT +
Preference number: 6 (lower is better)
Translates to: QSRPACSRTLPR*SWLRTQAGRRT
Trigger: AGTTCTTCTACCTGCCTGAGTTCTTAACCAACTGCAACGGGGTAGAGTTCGGCTGCATGCAGGACGGGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000465910.5
CDS GCA 72 bp CAGCTGGAATATGGCTCACAGCACGGGATTTGGAGCTaGCCAGACCTCATTCCAAGTCTGGTTATGCTGGTG +
Preference number: 6 (lower is better)
Translates to: QLEYGSQHGIWS*PDLIPSLVMLV
Trigger: CACCAGCATAACCAGACTTGGAATGAGGTCTGGGCAGCTCCAAATCCCGTGCTGTGAGCCATATTCCAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465910.5
CDS CCA 72 bp TCATCCAGGAAGATCTTGATGAAGGGCACCATGCCGTaGTCCTTCAGGACAACTGCATTCCTCACCGAGCCT +
Preference number: 6 (lower is better)
Translates to: SSRKILMKGTMP*SFRTTAFLTEP
Trigger: AGGCTCGGTGAGGAATGCAGTTGTCCTGAAGGACCACGGCATGGTGCCCTTCATCAAGATCTTCCTGGATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000360890.6
CDS CCA 72 bp ACCGAGTGCAGAACTTTCACAGCCGCATACATGGTATaGTCATCTGTCGCTAAGGAGATGAGGCCCAGGAGG +
Preference number: 6 (lower is better)
Translates to: TECRTFTAAYMV*SSVAKEMRPRR
Trigger: CCTCCTGGGCCTCATCTCCTTAGCGACAGATGACCATACCATGTATGCGGCTGTGAAAGTTCTGCACTCGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS CCA 72 bp GTGTCCTCCGAGGTGGCTTTCCCCTTCAGGCTGGGTTaGAAAGAGCAGAAGCTTTTAAAGGCCTTACTCCGA +
Preference number: 6 (lower is better)
Translates to: VSSEVAFPFRLG*KEQKLLKALLR
Trigger: TCGGAGTAAGGCCTTTAAAAGCTTCTGCTCTTTCCAACCCAGCCTGAAGGGGAAAGCCACCTCGGAGGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS CCA 72 bp ACACAGTCAGGAAGCAGTAGGACTGGAATGCACTCCTaGGCCATCTGCCCCAGAGCACATGTTCTTAGCTAC +
Preference number: 6 (lower is better)
Translates to: TQSGSSRTGMHS*AICPRAHVLSY
Trigger: GTAGCTAAGAACATGTGCTCTGGGGCAGATGGCCCAGGAGTGCATTCCAGTCCTACTGCTTCCTGACTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465910.5
CDS CAA 72 bp GGAGTGGACACTTTGTTTCCTGACTTCCTCATGATCTaGGCTTGCTTCCGAAGCTGTGCCAGTAGCAGGCCC +
Preference number: 6 (lower is better)
Translates to: GVDTLFPDFLMI*ACFRSCASSRP
Trigger: GGGCCTGCTACTGGCACAGCTTCGGAAGCAAGCCAAGATCATGAGGAAGTCAGGAAACAAAGTGTCCACTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000360890.6
CDS CAA 72 bp GGGATGAGGCTCGGCTCATTGAATAGGAAGATGAGCTaGGGTATAAGCTGTGCCTGGTGGGCAGCTTCAGCA +
Preference number: 6 (lower is better)
Translates to: GMRLGSLNRKMS*GISCAWWAASA
Trigger: TGCTGAAGCTGCCCACCAGGCACAGCTTATACCCAAGCTCATCTTCCTATTCAATGAGCCGAGCCTCATCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000374161.7
CDS CAA 72 bp CTTCCTGAGCTCAGGGCCTCCAAAGGAGACAAGCGTTaGATGCGTTTCCTCATTCGAGCTGGTCCTTCTCTC +
Preference number: 6 (lower is better)
Translates to: LPELRASKGDKR*MRFLIRAGPSL
Trigger: GAGAGAAGGACCAGCTCGAATGAGGAAACGCATCAAACGCTTGTCTCCTTTGGAGGCCCTGAGCTCAGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS CAA 90 bp ATCTTGGAGGGGATGAGGCTCGGCTCATTGAATAGGAAGATGAGCTaGGGTATAAGCTGTGCCTGGTGGGCAGCTTCAGCATTCCTGGGT +
Preference number: 6 (lower is better)
Translates to: ILEGMRLGSLNRKMS*GISCAWWAASAFLG
Trigger: ACCCAGGAATGCTGAAGCTGCCCACCAGGCACAGCTTATACCCAAGCTCATCTTCCTATTCAATGAGCCGAGCCTCATCCCCTCCAAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000374161.7
CDS TCA 72 bp GTTTCGAGCATTCCAGGCCCACATGGTCCTGATGACTaGCAAGACTTGTATGCAGAGGACAGAGTCACTGGC +
Preference number: 6 (lower is better)
Translates to: VSSIPGPHGPDD*QDLYAEDRVTG
Trigger: GCCAGTGACTCTGTCCTCTGCATACAAGTCTTGTCAGTCATCAGGACCATGTGGGCCTGGAATGCTCGAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000360890.6
CDS TCA 72 bp GACTTCAGGAGATCCAGTTTCAGCTGCAGCTCCCCTTaGGTGGATGAGCATAGAGCACCCACAATGATGCTC +
Preference number: 6 (lower is better)
Translates to: DFRRSSFSCSSP*VDEHRAPTMML
Trigger: GAGCATCATTGTGGGTGCTCTATGCTCATCCACTCAAGGGGAGCTGCAGCTGAAACTGGATCTCCTGAAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS TCA 72 bp GACGGGTACAGTAGACATCACCCGTGGGAGACAGTGTaGAGTTCTCGCAGATGTAGAAGTGTTGGTGGCCAA +
Preference number: 6 (lower is better)
Translates to: DGYSRHHPWETV*SSRRCRSVGGQ
Trigger: TTGGCCACCAACACTTCTACATCTGCGAGAACTTCACACTGTCTCCCACGGGTGATGTCTACTGTACCCGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS TCA 72 bp ACCTTCAGGAGATCCAGTTTCAGCTGCAGCTCCCCTTaGGTGGATGAGCATAGAGCACCCACAATGATGCTC +
Preference number: 6 (lower is better)
Translates to: TFRRSSFSCSSP*VDEHRAPTMML
Trigger: GAGCATCATTGTGGGTGCTCTATGCTCATCCACTCAAGGGGAGCTGCAGCTGAAACTGGATCTCCTGAAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360890.6
CDS GCA 72 bp CCTCCATGTGGGACATCAGGCTGCACAGCAGCAAGCTaGCCTTCATTTTTGGAACCTGGGTCTTCATTTCTG +
Preference number: 6 (lower is better)
Translates to: PPCGTSGCTAAS*PSFLEPGSSFL
Trigger: CAGAAATGAAGACCCAGGTTCCAAAAATGAAGGGCAGCTTGCTGCTGTGCAGCCTGATGTCCCACATGGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000360890.6
CDS CCA 72 bp GGGGGAGAAGACTCAACAGGCTCTTCTGACGCTCAATaGGGCTCTTGTGAGTCAACTGCTGGTATTCCAGAA +
Preference number: 6 (lower is better)
Translates to: GGEDSTGSSDAQ*GSCESTAGIPE
Trigger: TTCTGGAATACCAGCAGTTGACTCACAAGAGCCCCATTGAGCGTCAGAAGAGCCTGTTGAGTCTTCTCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000360890.6
CDS CCA 72 bp AATAGGAAGATGAGCTTGGGTATAAGCTGTGCCTGGTaGGCAGCTTCAGCATTCCTGGGTCCTTCCCTTGGT +
Preference number: 6 (lower is better)
Translates to: NRKMSLGISCAW*AASAFLGPSLG
Trigger: ACCAAGGGAAGGACCCAGGAATGCTGAAGCTGCCCACCAGGCACAGCTTATACCCAAGCTCATCTTCCTATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000374161.7
CDS CCA 72 bp CTGCAGGAAGAAGGTGGAGACGATGAGGTAGACCTCTaGAATGTGGACGTGGTGGGCCAGAAAGTCATTCAA +
Preference number: 6 (lower is better)
Translates to: LQEEGGDDEVDL*NVDVVGQKVIQ
Trigger: TTGAATGACTTTCTGGCCCACCACGTCCACATTCCAGAGGTCTACCTCATCGTCTCCACCTTCTTCCTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000374161.7
CDS CCA 72 bp CCAGAGCCAAGAGCAGTAGCACCTTATCTACCAGGGTaGGGTGTGCCAATGACACTGTTCTTGGACTTCAAG +
Preference number: 6 (lower is better)
Translates to: PEPRAVAPYLPG*GVPMTLFLDFK
Trigger: CTTGAAGTCCAAGAACAGTGTCATTGGCACACCCCACCCTGGTAGATAAGGTGCTACTGCTCTTGGCTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465910.5
CDS CAA 72 bp TCCATGCAGATCTGCCTCTCATTCACCGACGAAGGCTaGAGGGTGTACACAACAAACAGCCCAATCCTGAGC +
Preference number: 6 (lower is better)
Translates to: SMQICLSFTDEG*RVYTTNSPILS
Trigger: GCTCAGGATTGGGCTGTTTGTTGTGTACACCCTCAAGCCTTCGTCGGTGAATGAGAGGCAGATCTGCATGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000374161.7
CDS CAA 72 bp ATGTGTGTCCCCTGGCACAGAGCCTGGTGCAGCTTGTaGACTCAAAACACTGAGGCCAGCCTAGTTTCTAAG +
Preference number: 6 (lower is better)
Translates to: MCVPWHRAWCSL*TQNTEASLVSK
Trigger: CTTAGAAACTAGGCTGGCCTCAGTGTTTTGAGTCAACAAGCTGCACCAGGCTCTGTGCCAGGGGACACACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465910.5
CDS CAA 90 bp ATGCCAATGATGGTGGAGATCTTGGAGGGGATGAGGCTCGGCTCATaGAATAGGAAGATGAGCTTGGGTATAAGCTGTGCCTGGTGGGCA +
Preference number: 6 (lower is better)
Translates to: MPMMVEILEGMRLGS*NRKMSLGISCAWWA
Trigger: TGCCCACCAGGCACAGCTTATACCCAAGCTCATCTTCCTATTCAATGAGCCGAGCCTCATCCCCTCCAAGATCTCCACCATCATTGGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000374161.7
CDS TCA 72 bp CAGTGGCCAAAGCACAGAGGCTGTAATCCTTCCTTGTaGAACTTGGGACTCTCCACTGGTCTCTTGAGGAGA +
Preference number: 6 (lower is better)
Translates to: QWPKHRGCNPSL*NLGLSTGLLRR
Trigger: TCTCCTCAAGAGACCAGTGGAGAGTCCCAAGTTTCACAAGGAAGGATTACAGCCTCTGTGCTTTGGCCACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465910.5
CDS GCA 72 bp ATGGTCAGAAGAGATGGACTAATAATCACCACTATGTaGTGGGCACCGAAGGTGGCCCATCTCATTGCGCTC +
Preference number: 6 (lower is better)
Translates to: MVRRDGLIITTM*WAPKVAHLIAL
Trigger: GAGCGCAATGAGATGGGCCACCTTCGGTGCCCAGCACATAGTGGTGATTATTAGTCCATCTCTTCTGACCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465910.5
CDS GCA 72 bp CATGTTGTTCAGTGTAGTGGGATTTCCCCAAGGCAGTaGATGTCCTCAGATGACACTGGCACCCGACTTCAT +
Preference number: 6 (lower is better)
Translates to: HVVQCSGISPRQ*MSSDDTGTRLH
Trigger: ATGAAGTCGGGTGCCAGTGTCATCTGAGGACATGCACTGCCTTGGGGAAATCCCACTACACTGAACAACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465910.5
CDS CCA 72 bp CCTAGAAACTGTCTTAGCACATCCGGTTCAATGGCCTaGGAAGCGAGCTTCTCAAAGATCCTGATGAGGCGT +
Preference number: 6 (lower is better)
Translates to: PRNCLSTSGSMA*EASFSKILMRR
Trigger: ACGCCTCATCAGGATCTTTGAGAAGCTCGCTTCCCAGGCCATTGAACCGGATGTGCTAAGACAGTTTCTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS CCA 72 bp GTCCAAAAGAAACTCTTTCTTCTGCAACAAAGGGCGTaGCTTCACTGTCCAGGTCCTCCCCTTGGACATGCA +
Preference number: 6 (lower is better)
Translates to: VQKKLFLLQQRA*LHCPGPPLGHA
Trigger: TGCATGTCCAAGGGGAGGACCTGGACAGTGAAGCCACGCCCTTTGTTGCAGAAGAAAGAGTTTCTTTTGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS CCA 72 bp TTGAATAGGAAGATGAGCTTGGGTATAAGCTGTGCCTaGTGGGCAGCTTCAGCATTCCTGGGTCCTTCCCTT +
Preference number: 6 (lower is better)
Translates to: LNRKMSLGISCA*WAASAFLGPSL
Trigger: AAGGGAAGGACCCAGGAATGCTGAAGCTGCCCACCAGGCACAGCTTATACCCAAGCTCATCTTCCTATTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000374161.7
CDS CCA 72 bp GCCACCAGCTGCTGCCAGAGAGTCTGCACTGTCTTCTaGATGTTGTGTTGGACATCACTCAAACTTGGTAAG +
Preference number: 6 (lower is better)
Translates to: ATSCCQRVCTVF*MLCWTSLKLGK
Trigger: CTTACCAAGTTTGAGTGATGTCCAACACAACATCCAGAAGACAGTGCAGACTCTCTGGCAGCAGCTGGTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS CAA 72 bp ATGGTGGAGATCTTGGAGGGGATGAGGCTCGGCTCATaGAATAGGAAGATGAGCTTGGGTATAAGCTGTGCC +
Preference number: 6 (lower is better)
Translates to: MVEILEGMRLGS*NRKMSLGISCA
Trigger: GGCACAGCTTATACCCAAGCTCATCTTCCTATTCAATGAGCCGAGCCTCATCCCCTCCAAGATCTCCACCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000374161.7
CDS CAA 72 bp TGTCCAAAGTTGCTGACAAACCCCAGGATGGTGCTTTaGATGAGGGGGTCAGTGATGCTGCTGAGGTCCATT +
Preference number: 6 (lower is better)
Translates to: CPKLLTNPRMVL*MRGSVMLLRSI
Trigger: AATGGACCTCAGCAGCATCACTGACCCCCTCATCAAAAGCACCATCCTGGGGTTTGTCAGCAACTTTGGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000465910.5
CDS CAA 90 bp ATCGCTTGGTGCATATCCACAGGGAAGCCAATCTCAAAGGAGGACTaGAAATCACCTTCAGGAGATCCAGTTTCAGCTGCAGCTCCCCTT +
Preference number: 6 (lower is better)
Translates to: IAWCISTGKPISKED*KSPSGDPVSAAAPL
Trigger: AAGGGGAGCTGCAGCTGAAACTGGATCTCCTGAAGGTGATTTCAAGTCCTCCTTTGAGATTGGCTTCCCTGTGGATATGCACCAAGCGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360890.6
CDS CAA 90 bp CATAACCAGGACTGCTGGCAGGAGTTGCTGGAGGTAGATCCCAGCTaGATAACAGAAAGTTCTTTCCAAGAATCACAGACATCCCCCTGG +
Preference number: 6 (lower is better)
Translates to: HNQDCWQELLEVDPS*ITESSFQESQTSPW
Trigger: CCAGGGGGATGTCTGTGATTCTTGGAAAGAACTTTCTGTTATCAAGCTGGGATCTACCTCCAGCAACTCCTGCCAGCAGTCCTGGTTATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374161.7
CDS TCA 72 bp CGCTCTGGGTCAGCCCATCATACCGAAGTAACACTTTaGGCAGCAGAGGATAGCCCTCTGAATTCTCAAACT +
Preference number: 6 (lower is better)
Translates to: RSGSAHHTEVTL*AAEDSPLNSQT
Trigger: AGTTTGAGAATTCAGAGGGCTATCCTCTGCTGCTCAAAGTGTTACTTCGGTATGATGGGCTGACCCAGAGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000360890.6
CDS TCA 72 bp GCTTCATGGCTGAGGACAGGCTTCCACTCCACAAAGTaGCTTTGCTGTGGTGTGCAACATTTGAACGACTTG +
Preference number: 6 (lower is better)
Translates to: ASWLRTGFHSTK*LCCGVQHLNDL
Trigger: CAAGTCGTTCAAATGTTGCACACCACAGCAAAGTCACTTTGTGGAGTGGAAGCCTGTCCTCAGCCATGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS TCA 72 bp CAGCTTCCTTTCCTTGGTCTGAGCCCCCATGGGCTTTaGAAGATCCCGGAAAATCTTCGGATTTGCCAAGTT +
Preference number: 6 (lower is better)
Translates to: QLPFLGLSPHGL*KIPENLRICQV
Trigger: AACTTGGCAAATCCGAAGATTTTCCGGGATCTTTCAAAGCCCATGGGGGCTCAGACCAAGGAAAGGAAGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS TCA 72 bp AGCCCACATGGGAGATTTGAGCTCCCTTGTTACTGTTaGTGTGGTTTGCACCTCATGTCCCTTTCCATGAGG +
Preference number: 6 (lower is better)
Translates to: SPHGRFELPCYC*CGLHLMSLSMR
Trigger: CCTCATGGAAAGGGACATGAGGTGCAAACCACATCAACAGTAACAAGGGAGCTCAAATCTCCCATGTGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465910.5
CDS GCA 72 bp AGGAAGTCACACATGGCATTACTGGTCAGGACCGAGTaGAGAACTTTCACAGCCGCATACATGGTATGGTCA +
Preference number: 6 (lower is better)
Translates to: RKSHMALLVRTE*RTFTAAYMVWS
Trigger: TGACCATACCATGTATGCGGCTGTGAAAGTTCTGCACTCGGTCCTGACCAGTAATGCCATGTGTGACTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS GCA 72 bp CTGGCACCTATGTTTGGGATATTAGCTGGGAGTCCATaGTTTAGCCATAGGGAGCTCAGCAGCTTCTTTCCA +
Preference number: 6 (lower is better)
Translates to: LAPMFGILAGSP*FSHRELSSFFP
Trigger: TGGAAAGAAGCTGCTGAGCTCCCTATGGCTAAAGCATGGACTCCCAGCTAATATCCCAAACATAGGTGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374161.7
CDS CCA 72 bp TCTCTGAACATCGCTGCATCACCTCCACTTGTCATGTaGAATAGTTCCATAGCAGAAAGCAGGACCTCGGAC +
Preference number: 6 (lower is better)
Translates to: SLNIAASPPLVM*NSSIAESRTSD
Trigger: GTCCGAGGTCCTGCTTTCTGCTATGGAACTATTCCACATGACAAGTGGAGGTGATGCAGCGATGTTCAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000374161.7
CDS CCA 72 bp GAGGACAGGCTTCCACTCCACAAAGTGACTTTGCTGTaGTGTGCAACATTTGAACGACTTGCCAGTGACTTC +
Preference number: 6 (lower is better)
Translates to: EDRLPLHKVTLL*CATFERLASDF
Trigger: GAAGTCACTGGCAAGTCGTTCAAATGTTGCACACCACAGCAAAGTCACTTTGTGGAGTGGAAGCCTGTCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS CAA 72 bp CCAGCACAATTCCTCAGCAAGAACACGGGCATGGCATaGTCACGGGATGAAATGTTCATCTCTTTGGCGATC +
Preference number: 6 (lower is better)
Translates to: PAQFLSKNTGMA*SRDEMFISLAI
Trigger: GATCGCCAAAGAGATGAACATTTCATCCCGTGACAATGCCATGCCCGTGTTCTTGCTGAGGAATTGTGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS CAA 72 bp ATGGCTGAGGACAGGCTTCCACTCCACAAAGTGACTTaGCTGTGGTGTGCAACATTTGAACGACTTGCCAGT +
Preference number: 6 (lower is better)
Translates to: MAEDRLPLHKVT*LWCATFERLAS
Trigger: ACTGGCAAGTCGTTCAAATGTTGCACACCACAGCAAAGTCACTTTGTGGAGTGGAAGCCTGTCCTCAGCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS CAA 72 bp TCAGCTTCCTTTCCTTGGTCTGAGCCCCCATGGGCTTaGAAAGATCCCGGAAAATCTTCGGATTTGCCAAGT +
Preference number: 6 (lower is better)
Translates to: SASFPWSEPPWA*KDPGKSSDLPS
Trigger: ACTTGGCAAATCCGAAGATTTTCCGGGATCTTTCAAAGCCCATGGGGGCTCAGACCAAGGAAAGGAAGCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000465910.5
CDS CAA 90 bp ATCAGCTTCATGGCTGAGGACAGGCTTCCACTCCACAAAGTGACTTaGCTGTGGTGTGCAACATTTGAACGACTTGCCAGTGACTTCTTC +
Preference number: 6 (lower is better)
Translates to: ISFMAEDRLPLHKVT*LWCATFERLASDFF
Trigger: GAAGAAGTCACTGGCAAGTCGTTCAAATGTTGCACACCACAGCAAAGTCACTTTGTGGAGTGGAAGCCTGTCCTCAGCCATGAAGCTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS TCA 72 bp CTCAGCATCACACAGGTGAGTTCTCTTTCTGGATCCTaGACACCAGGAGTGGACACTTTGTTTCCTGACTTC +
Preference number: 6 (lower is better)
Translates to: LSITQVSSLSGS*TPGVDTLFPDF
Trigger: GAAGTCAGGAAACAAAGTGTCCACTCCTGGTGTTCAGGATCCAGAAAGAGAACTCACCTGTGTGATGCTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000360890.6
CDS TCA 72 bp AGTCAGAAGGGTGCTGGGAGCCAATTTCACTCTCTATaGGATGTGAAGAGGAAGGAGAGTGGTCCTCCTAAT +
Preference number: 6 (lower is better)
Translates to: SQKGAGSQFHSL*DVKRKESGPPN
Trigger: ATTAGGAGGACCACTCTCCTTCCTCTTCACATCTCATAGAGAGTGAAATTGGCTCCCAGCACCCTTCTGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374161.7
CDS GCA 72 bp AGGAGAAACGCCATTATCTGGTACCCACAGATGTGTTaGATCAGGAAGTCACACATGGCATTACTGGTCAGG +
Preference number: 6 (lower is better)
Translates to: RRNAIIWYPQMC*IRKSHMALLVR
Trigger: CCTGACCAGTAATGCCATGTGTGACTTCCTGATGCAACACATCTGTGGGTACCAGATAATGGCGTTTCTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS GCA 72 bp GCAGTATTCATCCAGAGCTCGAAATTGCAGAGGATGTaGTGGAAGACACCAGTGTTGGTGATAGCAGATGAC +
Preference number: 6 (lower is better)
Translates to: AVFIQSSKLQRM*WKTPVLVIADD
Trigger: GTCATCTGCTATCACCAACACTGGTGTCTTCCAGCACATCCTCTGCAATTTCGAGCTCTGGATGAATACTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS CCA 72 bp GATGGATCCATAGAAAGGAAAGGCCCTGGTAGAGCCTaGATGTATAACATCTTGGCAGAGCCAATGACCTGT +
Preference number: 6 (lower is better)
Translates to: DGSIERKGPGRA*MYNILAEPMTC
Trigger: ACAGGTCATTGGCTCTGCCAAGATGTTATACATCCAGGCTCTACCAGGGCCTTTCCTTTCTATGGATCCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS CCA 72 bp TCACTGTCCAGGTCCTCCCCTTGGACATGCACAGCTTaGAAGTTACCACAATATCTTGGGCCAAGTTTGTTA +
Preference number: 6 (lower is better)
Translates to: SLSRSSPWTCTA*KLPQYLGPSLL
Trigger: TAACAAACTTGGCCCAAGATATTGTGGTAACTTCCAAGCTGTGCATGTCCAAGGGGAGGACCTGGACAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS CCA 72 bp TGCTGCTTGTACCCAAAAATAAGGTCTATCCAATGGTaGAGGTTGGCACTGACAAAGTCACTTTCCAGGGCC +
Preference number: 6 (lower is better)
Translates to: CCLYPKIRSIQW*RLALTKSLSRA
Trigger: GGCCCTGGAAAGTGACTTTGTCAGTGCCAACCTCCACCATTGGATAGACCTTATTTTTGGGTACAAGCAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000465910.5
CDS CCA 72 bp CCCTGCTGCTTGTACCCAAAAATAAGGTCTATCCAATaGTGGAGGTTGGCACTGACAAAGTCACTTTCCAGG +
Preference number: 6 (lower is better)
Translates to: PCCLYPKIRSIQ*WRLALTKSLSR
Trigger: CCTGGAAAGTGACTTTGTCAGTGCCAACCTCCACCATTGGATAGACCTTATTTTTGGGTACAAGCAGCAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000465910.5
CDS CCA 72 bp TGTAGTAGCATCCATTCAATGCTATTCCAATCCCCGTaGGAACAAGGAGGTTCAATGGCTTGCCCAAGGTCA +
Preference number: 6 (lower is better)
Translates to: CSSIHSMLFQSP*EQGGSMACPRS
Trigger: TGACCTTGGGCAAGCCATTGAACCTCCTTGTTCCCACGGGGATTGGAATAGCATTGAATGGATGCTACTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465910.5
CDS CAA 72 bp TTCACTGTCCAGGTCCTCCCCTTGGACATGCACAGCTaGGAAGTTACCACAATATCTTGGGCCAAGTTTGTT +
Preference number: 6 (lower is better)
Translates to: FTVQVLPLDMHS*EVTTISWAKFV
Trigger: AACAAACTTGGCCCAAGATATTGTGGTAACTTCCAAGCTGTGCATGTCCAAGGGGAGGACCTGGACAGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS CAA 90 bp ACCCAGGGTTGCCTCTGTGTGTGTGAGATGAATCAAGGATTTTTGTaGTGGCCGACAGAGATGAGGGAATTCCAAGACCTAGAAACTGTC +
Preference number: 6 (lower is better)
Translates to: TQGCLCVCEMNQGFL*WPTEMREFQDLETV
Trigger: GACAGTTTCTAGGTCTTGGAATTCCCTCATCTCTGTCGGCCACAACAAAAATCCTTGATTCATCTCACACACACAGAGGCAACCCTGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS TCA 72 bp GTAGAGCCTGGATGTATAACATCTTGGCAGAGCCAATaGCCTGTCCATCCAGACAGGTGGAAACTGTACAAT +
Preference number: 6 (lower is better)
Translates to: VEPGCITSWQSQ*PVHPDRWKLYN
Trigger: ATTGTACAGTTTCCACCTGTCTGGATGGACAGGTCATTGGCTCTGCCAAGATGTTATACATCCAGGCTCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS TCA 72 bp AAACTGCTGTATAAAGTGCTGAGGACAGTGTCCCTTTaGGAAGAGGCAGTCTCAATGACCACCATGATGTGC +
Preference number: 6 (lower is better)
Translates to: KLLYKVLRTVSL*EEAVSMTTMMC
Trigger: GCACATCATGGTGGTCATTGAGACTGCCTCTTCTCAAAGGGACACTGTCCTCAGCACTTTATACAGCAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS TCA 72 bp AACCTCTGGATAAATTTCAGCTTCCTTTCCTTGGTCTaGGCCCCCATGGGCTTTGAAAGATCCCGGAAAATC +
Preference number: 6 (lower is better)
Translates to: NLWINFSFLSLV*APMGFERSRKI
Trigger: GATTTTCCGGGATCTTTCAAAGCCCATGGGGGCTCAGACCAAGGAAAGGAAGCTGAAATTTATCCAGAGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000465910.5
CDS CCA 72 bp GTACTCAGTGCTGGTTCCCATAACTGTGGACAGGGTTaGAATAAACAAACAGCCATAACCTTCCACGGACAT +
Preference number: 6 (lower is better)
Translates to: VLSAGSHNCGQG*NKQTAITFHGH
Trigger: ATGTCCGTGGAAGGTTATGGCTGTTTGTTTATTCCAACCCTGTCCACAGTTATGGGAACCAGCACTGAGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS CAA 72 bp GGTTGCCTCTGTGTGTGTGAGATGAATCAAGGATTTTaGTTGTGGCCGACAGAGATGAGGGAATTCCAAGAC +
Preference number: 6 (lower is better)
Translates to: GCLCVCEMNQGF*LWPTEMREFQD
Trigger: GTCTTGGAATTCCCTCATCTCTGTCGGCCACAACAAAAATCCTTGATTCATCTCACACACACAGAGGCAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS CAA 72 bp TGCATATCCACAGGGAAGCCAATCTCAAAGGAGGACTaGAAATCACCTTCAGGAGATCCAGTTTCAGCTGCA +
Preference number: 6 (lower is better)
Translates to: CISTGKPISKED*KSPSGDPVSAA
Trigger: TGCAGCTGAAACTGGATCTCCTGAAGGTGATTTCAAGTCCTCCTTTGAGATTGGCTTCCCTGTGGATATGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360890.6
CDS CAA 72 bp GACTGCTGGCAGGAGTTGCTGGAGGTAGATCCCAGCTaGATAACAGAAAGTTCTTTCCAAGAATCACAGACA +
Preference number: 6 (lower is better)
Translates to: DCWQELLEVDPS*ITESSFQESQT
Trigger: TGTCTGTGATTCTTGGAAAGAACTTTCTGTTATCAAGCTGGGATCTACCTCCAGCAACTCCTGCCAGCAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374161.7
CDS GCA 72 bp ATGACCTGTCCATCCAGACAGGTGGAAACTGTACAATaGCTTTTCATTTCCTTAGTGACAACCACAGCCAAG +
Preference number: 6 (lower is better)
Translates to: MTCPSRQVETVQ*LFISLVTTTAK
Trigger: CTTGGCTGTGGTTGTCACTAAGGAAATGAAAAGGCATTGTACAGTTTCCACCTGTCTGGATGGACAGGTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS GCA 72 bp CCTGAAGAAGCCTTTGAATTCAAGTCTTTCCAGGTTTaGTTGGACCTGCTCATCAGACAAGTGAAGATGGCT +
Preference number: 6 (lower is better)
Translates to: PEEAFEFKSFQV*LDLLIRQVKMA
Trigger: AGCCATCTTCACTTGTCTGATGAGCAGGTCCAAGCAAACCTGGAAAGACTTGAATTCAAAGGCTTCTTCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374161.7
CDS CCA 72 bp CGCTACCTAATACAGGGTACTGCCTGCCACATACAGTaGCTAACTGAATTACATGAATACAAATGCCTGAGC +
Preference number: 6 (lower is better)
Translates to: RYLIQGTACHIQ*LTELHEYKCLS
Trigger: GCTCAGGCATTTGTATTCATGTAATTCAGTTAGCCACTGTATGTGGCAGGCAGTACCCTGTATTAGGTAGCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360890.6
CDS CAA 72 bp TGCCTCTGTGTGTGTGAGATGAATCAAGGATTTTTGTaGTGGCCGACAGAGATGAGGGAATTCCAAGACCTA +
Preference number: 6 (lower is better)
Translates to: CLCVCEMNQGFL*WPTEMREFQDL
Trigger: TAGGTCTTGGAATTCCCTCATCTCTGTCGGCCACAACAAAAATCCTTGATTCATCTCACACACACAGAGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS CAA 72 bp TTGTACCCAAAAATAAGGTCTATCCAATGGTGGAGGTaGGCACTGACAAAGTCACTTTCCAGGGCCTTTCTG +
Preference number: 6 (lower is better)
Translates to: LYPKIRSIQWWR*ALTKSLSRAFL
Trigger: CAGAAAGGCCCTGGAAAGTGACTTTGTCAGTGCCAACCTCCACCATTGGATAGACCTTATTTTTGGGTACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000465910.5
CDS CAA 72 bp ACCCTCACAGAGCTGACAAGGGCTATTTCTCCTCTCTaGGAGTTGTTCCTGAAGAAGCCTTTGAATTCAAGT +
Preference number: 6 (lower is better)
Translates to: TLTELTRAISPL*ELFLKKPLNSS
Trigger: ACTTGAATTCAAAGGCTTCTTCAGGAACAACTCCAAGAGAGGAGAAATAGCCCTTGTCAGCTCTGTGAGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374161.7
CDS CAA 90 bp GTTGTTCCTGAAGAAGCCTTTGAATTCAAGTCTTTCCAGGTTTGCTaGGACCTGCTCATCAGACAAGTGAAGATGGCTCTAGAAACTGTG +
Preference number: 6 (lower is better)
Translates to: VVPEEAFEFKSFQVC*DLLIRQVKMALETV
Trigger: CACAGTTTCTAGAGCCATCTTCACTTGTCTGATGAGCAGGTCCAAGCAAACCTGGAAAGACTTGAATTCAAAGGCTTCTTCAGGAACAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374161.7
CDS CAA 90 bp TTAACCCTCACAGAGCTGACAAGGGCTATTTCTCCTCTCTTGGAGTaGTTCCTGAAGAAGCCTTTGAATTCAAGTCTTTCCAGGTTTGCT +
Preference number: 6 (lower is better)
Translates to: LTLTELTRAISPLLE*FLKKPLNSSLSRFA
Trigger: AGCAAACCTGGAAAGACTTGAATTCAAAGGCTTCTTCAGGAACAACTCCAAGAGAGGAGAAATAGCCCTTGTCAGCTCTGTGAGGGTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374161.7
CDS CAA 90 bp CTGATTTTAACCCTCACAGAGCTGACAAGGGCTATTTCTCCTCTCTaGGAGTTGTTCCTGAAGAAGCCTTTGAATTCAAGTCTTTCCAGG +
Preference number: 6 (lower is better)
Translates to: LILTLTELTRAISPL*ELFLKKPLNSSLSR
Trigger: CCTGGAAAGACTTGAATTCAAAGGCTTCTTCAGGAACAACTCCAAGAGAGGAGAAATAGCCCTTGTCAGCTCTGTGAGGGTTAAAATCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374161.7
CDS CCA 72 bp CTCTGTGTGTGTGAGATGAATCAAGGATTTTTGTTGTaGCCGACAGAGATGAGGGAATTCCAAGACCTAGAA +
Preference number: 6 (lower is better)
Translates to: LCVCEMNQGFLL*PTEMREFQDLE
Trigger: TTCTAGGTCTTGGAATTCCCTCATCTCTGTCGGCCACAACAAAAATCCTTGATTCATCTCACACACACAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS CAA 72 bp ATTTCCAAAAGATGGGAAAAGAGGCTGAGCTCCAGATaGTCTGCAGTATTCATCCAGAGCTCGAAATTGCAG +
Preference number: 6 (lower is better)
Translates to: ISKRWEKRLSSR*SAVFIQSSKLQ
Trigger: CTGCAATTTCGAGCTCTGGATGAATACTGCAGACAATCTGGAGCTCAGCCTCTTTTCCCATCTTTTGGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS CAA 72 bp GAAGAAGCCTTTGAATTCAAGTCTTTCCAGGTTTGCTaGGACCTGCTCATCAGACAAGTGAAGATGGCTCTA +
Preference number: 6 (lower is better)
Translates to: EEAFEFKSFQVC*DLLIRQVKMAL
Trigger: TAGAGCCATCTTCACTTGTCTGATGAGCAGGTCCAAGCAAACCTGGAAAGACTTGAATTCAAAGGCTTCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374161.7
CDS CAA 72 bp ACAGAGCTGACAAGGGCTATTTCTCCTCTCTTGGAGTaGTTCCTGAAGAAGCCTTTGAATTCAAGTCTTTCC +
Preference number: 6 (lower is better)
Translates to: TELTRAISPLLE*FLKKPLNSSLS
Trigger: GGAAAGACTTGAATTCAAAGGCTTCTTCAGGAACAACTCCAAGAGAGGAGAAATAGCCCTTGTCAGCTCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374161.7
CDS TCA 72 bp TGGGCCAAGTTTGTTAATAACTTCCAGAGTTTCCATTaGAATGGCTTCTTCAAAGAGGTATGTGGGGCCAAG +
Preference number: 6 (lower is better)
Translates to: WAKFVNNFQSFH*NGFFKEVCGAK
Trigger: CTTGGCCCCACATACCTCTTTGAAGAAGCCATTTCAATGGAAACTCTGGAAGTTATTAACAAACTTGGCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS CCA 72 bp GAGTTTCCATTGAAATGGCTTCTTCAAAGAGGTATGTaGGGCCAAGACGCCAGATTAATGAAGACTTTTGTT +
Preference number: 6 (lower is better)
Translates to: EFPLKWLLQRGM*GQDARLMKTFV
Trigger: AACAAAAGTCTTCATTAATCTGGCGTCTTGGCCCCACATACCTCTTTGAAGAAGCCATTTCAATGGAAACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS CAA 90 bp TGGACATGCACAGCTTGGAAGTTACCACAATATCTTGGGCCAAGTTaGTTAATAACTTCCAGAGTTTCCATTGAAATGGCTTCTTCAAAG +
Preference number: 6 (lower is better)
Translates to: WTCTAWKLPQYLGPS*LITSRVSIEMASSK
Trigger: CTTTGAAGAAGCCATTTCAATGGAAACTCTGGAAGTTATTAACAAACTTGGCCCAAGATATTGTGGTAACTTCCAAGCTGTGCATGTCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS TCA 72 bp CTTAGAATTTCACAGGTAACGCAATGTTTCTACTCATaGAGTGAAGGTCTGTTTAAACCTGTTGGGGTTTGG +
Preference number: 6 (lower is better)
Translates to: LRISQVTQCFYS*SEGLFKPVGVW
Trigger: CCAAACCCCAACAGGTTTAAACAGACCTTCACTTCATGAGTAGAAACATTGCGTTACCTGTGAAATTCTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374161.7
CDS CCA 72 bp TTGGACATGCACAGCTTGGAAGTTACCACAATATCTTaGGCCAAGTTTGTTAATAACTTCCAGAGTTTCCAT +
Preference number: 6 (lower is better)
Translates to: LDMHSLEVTTIS*AKFVNNFQSFH
Trigger: ATGGAAACTCTGGAAGTTATTAACAAACTTGGCCCAAGATATTGTGGTAACTTCCAAGCTGTGCATGTCCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS CAA 72 bp AATATTGAGCAACATCTGCACGAACATCTTTTGAACTaGAAGATCACTCTCAAGAAGCTCATCTTTGTCCAG +
Preference number: 6 (lower is better)
Translates to: NIEQHLHEHLLN*KITLKKLIFVQ
Trigger: CTGGACAAAGATGAGCTTCTTGAGAGTGATCTTCAAGTTCAAAAGATGTTCGTGCAGATGTTGCTCAATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325239.11
ENST00000360890.6
CDS CAA 72 bp ACAGCTTGGAAGTTACCACAATATCTTGGGCCAAGTTaGTTAATAACTTCCAGAGTTTCCATTGAAATGGCT +
Preference number: 6 (lower is better)
Translates to: TAWKLPQYLGPS*LITSRVSIEMA
Trigger: AGCCATTTCAATGGAAACTCTGGAAGTTATTAACAAACTTGGCCCAAGATATTGTGGTAACTTCCAAGCTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325239.11
CDS CAA 72 bp GTTTCTACTCATGAAGTGAAGGTCTGTTTAAACCTGTaGGGGTTTGGGATTCATTTCTTTATCATGTTCCTC +
Preference number: 6 (lower is better)
Translates to: VSTHEVKVCLNL*GFGIHFFIMFL
Trigger: GAGGAACATGATAAAGAAATGAATCCCAAACCCCAACAGGTTTAAACAGACCTTCACTTCATGAGTAGAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374161.7