RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for WDCP (Homo sapiens)

Ensembl gene IDs: ENSG00000163026

Ensembl transcript IDs: ENST00000295148.9, ENST00000406895.3, ENST00000443232.1

Found 320 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGGGGGAAACCAGGAGAGCCGACCATGGCAAGCGCTTCGCCTGAGTaGAGTGGGAGTCTCATTGGCGAGTGTCCAGTGTCAAGCAGGCCT +
Preference number: 1 (lower is better)
Translates to: RGKPGEPTMASASPE*SGSLIGECPVSSRP
Trigger: AGGCCTGCTTGACACTGGACACTCGCCAATGAGACTCCCACTGCACTCAGGCGAAGCGCTTGCCATGGTCGGCTCTCCTGGTTTCCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
3UTR TCA 90 bp AAACAGGGGGAAACCAGGAGAGCCGACCATGGCAAGCGCTTCGCCTaGGTGCAGTGGGAGTCTCATTGGCGAGTGTCCAGTGTCAAGCAG +
Preference number: 1 (lower is better)
Translates to: KQGETRRADHGKRFA*VQWESHWRVSSVKQ
Trigger: CTGCTTGACACTGGACACTCGCCAATGAGACTCCCACTGCACTCAGGCGAAGCGCTTGCCATGGTCGGCTCTCCTGGTTTCCCCCTGTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
3UTR GCA 90 bp CAGATACTTCCAAGTGGAGCCAGGCCTCAGACTGTTCTCAGTCACTaGTCTCCCACAGCTGATTACAGACATTGCCTGTGCTTCCTACCC +
Preference number: 1 (lower is better)
Translates to: QILPSGARPQTVLSH*SPTADYRHCLCFLP
Trigger: GGGTAGGAAGCACAGGCAATGTCTGTAATCAGCTGTGGGAGAGCAGTGACTGAGAACAGTCTGAGGCCTGGCTCCACTTGGAAGTATCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
3UTR GCA 90 bp CAGACTGTTCTCAGTCACTGCTCTCCCACAGCTGATTACAGACATTaGCTGTGCTTCCTACCCCAGCAGCTGTCTAGTGCACTTGAACCA +
Preference number: 1 (lower is better)
Translates to: QTVLSHCSPTADYRH*LCFLPQQLSSALEP
Trigger: TGGTTCAAGTGCACTAGACAGCTGCTGGGGTAGGAAGCACAGGCAATGTCTGTAATCAGCTGTGGGAGAGCAGTGACTGAGAACAGTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
3UTR GCA 90 bp GTTCTCAGTCACTGCTCTCCCACAGCTGATTACAGACATTGCCTGTaGTTCCTACCCCAGCAGCTGTCTAGTGCACTTGAACCACAAAAT +
Preference number: 1 (lower is better)
Translates to: VLSHCSPTADYRHCL*FLPQQLSSALEPQN
Trigger: ATTTTGTGGTTCAAGTGCACTAGACAGCTGCTGGGGTAGGAAGCACAGGCAATGTCTGTAATCAGCTGTGGGAGAGCAGTGACTGAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
3UTR GCA 90 bp TCATCTGAAGAGCTACACAGCAAGGACACTGCAGATATCAAGCCATaGCATCTACATGGTTACAACAGCCAGTGGTATCTAAACTGGGGG +
Preference number: 1 (lower is better)
Translates to: SSEELHSKDTADIKP*HLHGYNSQWYLNWG
Trigger: CCCCCAGTTTAGATACCACTGGCTGTTGTAACCATGTAGATGGCATGGCTTGATATCTGCAGTGTCCTTGCTGTGTAGCTCTTCAGATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406895.3
3UTR TCA 90 bp AGAAACAGCACCTGGACTGTGAGAAAAAGAGTCTCTGAAGACATCTaGCCTGGACAGGCTGCCATCTCTTATGATTATTTCCTGTGTGGC +
Preference number: 1 (lower is better)
Translates to: RNSTWTVRKRVSEDI*PGQAAISYDYFLCG
Trigger: GCCACACAGGAAATAATCATAAGAGATGGCAGCCTGTCCAGGTCAGATGTCTTCAGAGACTCTTTTTCTCACAGTCCAGGTGCTGTTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406895.3
3UTR TCA 90 bp TGTTTTGTTCTGAGAATTCTGCCCTTAGTCAAAACCACACAGTCATaGATACATAAACACCACTTTCGGAGCCATCTAATAAAGACTGAG +
Preference number: 1 (lower is better)
Translates to: CFVLRILPLVKTTQS*IHKHHFRSHLIKTE
Trigger: CTCAGTCTTTATTAGATGGCTCCGAAAGTGGTGTTTATGTATTCATGACTGTGTGGTTTTGACTAAGGGCAGAATTCTCAGAACAAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
3UTR-3UTR TCA 90 bp CAGTGTGGTAGCAGCATCGGCACAACCTCAAGTGGAACCCAGAGGGGACAAATTGGCAAGCGCTTCGCCTaGGTGCAGTGGGAGTCTCAT +
Preference number: 2 (lower is better)
Translates to: QCGSSIGTTSSGTQRGQIGKRFA*VQWESH
Trigger: ATGAGACTCCCACTGCACTCAGGCGAAGCGCTTGCC...AATTTGTCCCCTCTGGGTTCCACTTGAGGTTGTGCCGATGCTGCTACCACACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
3UTR-3UTR GCA 90 bp TGCTCTCCCACAGCTGATTACAGACATTGCCTGTGCTTCCTACCCCAGCAGCTGAGCGCTTCGCCTGAGTaGAGTGGGAGTCTCATTGGC +
Preference number: 2 (lower is better)
Translates to: CSPTADYRHCLCFLPQQLSASPE*SGSLIG
Trigger: GCCAATGAGACTCCCACTGCACTCAGGCGAAGCGCT...CAGCTGCTGGGGTAGGAAGCACAGGCAATGTCTGTAATCAGCTGTGGGAGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
3UTR-3UTR GCA 90 bp GCAGAAGCCAGTGGGTCTCTGGTCCTCCTTGGAGCTCTGCTAATTCTTGCTGGTAGCGCTTCGCCTGAGTaGAGTGGGAGTCTCATTGGC +
Preference number: 2 (lower is better)
Translates to: AEASGSLVLLGALLILAGSASPE*SGSLIG
Trigger: GCCAATGAGACTCCCACTGCACTCAGGCGAAGCGCT...ACCAGCAAGAATTAGCAGAGCTCCAAGGAGGACCAGAGACCCACTGGCTTCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
3UTR-3UTR CCA 90 bp TGCTCTCCCACAGCTGATTACAGACATTGCCTGTGCTTCCTACCCCAGCAGCTGGAGAGCAGAAGCCAGTaGGTCTCTGGTCCTCCTTGG +
Preference number: 2 (lower is better)
Translates to: CSPTADYRHCLCFLPQQLESRSQ*VSGPPW
Trigger: CCAAGGAGGACCAGAGACCCACTGGCTTCTGCTCTC...CAGCTGCTGGGGTAGGAAGCACAGGCAATGTCTGTAATCAGCTGTGGGAGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
3UTR-3UTR TCA 90 bp AAATTCTGGGAGGTCCAGGCAACATCAGAGCCACTTCCTGTTCCTGAGAGCAGAGGCAAGCGCTTCGCCTaGGTGCAGTGGGAGTCTCAT +
Preference number: 2 (lower is better)
Translates to: KFWEVQATSEPLPVPESRGKRFA*VQWESH
Trigger: ATGAGACTCCCACTGCACTCAGGCGAAGCGCTTGCC...TCTGCTCTCAGGAACAGGAAGTGGCTCTGATGTTGCCTGGACCTCCCAGAATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
3UTR-3UTR CCA 90 bp TTAAATTCTGGGAGGTCCAGGCAACATCAGAGCCACTTCCTGTTCCTGAGAGCACAGGAGAGCCGACCATaGCAAGCGCTTCGCCTGAGT +
Preference number: 2 (lower is better)
Translates to: LNSGRSRQHQSHFLFLRAQESRP*QALRLS
Trigger: ACTCAGGCGAAGCGCTTGCCATGGTCGGCTCTCCTG...TGCTCTCAGGAACAGGAAGTGGCTCTGATGTTGCCTGGACCTCCCAGAATTTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
3UTR-3UTR CCA 90 bp GCTGATTACAGACATTGCCTGTGCTTCCTACCCCAGCAGCTGTCTAGTGCACTTAAGCCAGTGGGTCTCTaGTCCTCCTTGGAGCTCTGC +
Preference number: 2 (lower is better)
Translates to: ADYRHCLCFLPQQLSSALKPVGL*SSLELC
Trigger: GCAGAGCTCCAAGGAGGACCAGAGACCCACTGGCTT...AAGTGCACTAGACAGCTGCTGGGGTAGGAAGCACAGGCAATGTCTGTAATCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
3UTR-3UTR TCA 90 bp GCTGATTACAGACATTGCCTGTGCTTCCTACCCCAGCAGCTGTCTAGTGCACTTGTCTCTGAAGACATCTaGCCTGGACAGGCTGCCATC +
Preference number: 2 (lower is better)
Translates to: ADYRHCLCFLPQQLSSALVSEDI*PGQAAI
Trigger: GATGGCAGCCTGTCCAGGTCAGATGTCTTCAGAGAC...AAGTGCACTAGACAGCTGCTGGGGTAGGAAGCACAGGCAATGTCTGTAATCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406895.3
3UTR-3UTR CCA 90 bp TGTCTAGTGCACTTGAACCACAAAATGGGCCCTCACTTCTTTCCTAACCCAGCTCAGGAGAGCCGACCATaGCAAGCGCTTCGCCTGAGT +
Preference number: 2 (lower is better)
Translates to: CLVHLNHKMGPHFFPNPAQESRP*QALRLS
Trigger: ACTCAGGCGAAGCGCTTGCCATGGTCGGCTCTCCTG...AGCTGGGTTAGGAAAGAAGTGAGGGCCCATTTTGTGGTTCAAGTGCACTAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
3UTR CAA 90 bp ACAGACATTGCCTGTGCTTCCTACCCCAGCAGCTGTCTAGTGCACTaGAACCACAAAATGGGCCCTCACTTCTTTCCTAACCCAGCTCCA +
Preference number: 2 (lower is better)
Translates to: TDIACASYPSSCLVH*NHKMGPHFFPNPAP
Trigger: TGGAGCTGGGTTAGGAAAGAAGTGAGGGCCCATTTTGTGGTTCAAGTGCACTAGACAGCTGCTGGGGTAGGAAGCACAGGCAATGTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
3UTR-3UTR TCA 90 bp GGGACACTCATGAGTGGCCACAGCACAAAATCCTGCAGTAGGACTTACCTGGGCCCATCTAATAAAGACTaGGCTCTGCTACACAGCAGC +
Preference number: 2 (lower is better)
Translates to: GTLMSGHSTKSCSRTYLGPSNKD*ALLHSS
Trigger: GCTGCTGTGTAGCAGAGCTCAGTCTTTATTAGATGG...GCCCAGGTAAGTCCTACTGCAGGATTTTGTGCTGTGGCCACTCATGAGTGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
3UTR-3UTR GCA 90 bp GTCACTGCTCTCCCACAGCTGATTACAGACATTGCCTGTGCTTCCTACCCCAGCACACAGCAAGGACACTaGAGATATCAAGCCATGCCA +
Preference number: 2 (lower is better)
Translates to: VTALPQLITDIACASYPSTQQGH*RYQAMP
Trigger: TGGCATGGCTTGATATCTGCAGTGTCCTTGCTGTGT...GCTGGGGTAGGAAGCACAGGCAATGTCTGTAATCAGCTGTGGGAGAGCAGTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406895.3
3UTR-3UTR CCA 90 bp GCTGATTACAGACATTGCCTGTGCTTCCTACCCCAGCAGCTGTCTAGTGCACTTCAGTGGGAGTCTCATTaGCGAGTGTCCAGTGTCAAG +
Preference number: 2 (lower is better)
Translates to: ADYRHCLCFLPQQLSSALQWESH*RVSSVK
Trigger: CTTGACACTGGACACTCGCCAATGAGACTCCCACTG...AAGTGCACTAGACAGCTGCTGGGGTAGGAAGCACAGGCAATGTCTGTAATCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
3UTR CAA 90 bp GTGCAGTGGGAGTCTCATTGGCGAGTGTCCAGTGTCAAGCAGGCCTaGTTTGTAATGGTCTCATCTGAAGAGCTACACAGCAAGGACACT +
Preference number: 2 (lower is better)
Translates to: VQWESHWRVSSVKQA*FVMVSSEELHSKDT
Trigger: AGTGTCCTTGCTGTGTAGCTCTTCAGATGAGACCATTACAAACAAGGCCTGCTTGACACTGGACACTCGCCAATGAGACTCCCACTGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
3UTR-3UTR TCA 90 bp CCTGAGAGCAGAAGCCAGTGGGTCTCTGGTCCTCCTTGGAGCTCTGCTAATTCTTCCTCAACCTCCTCTTaGAGCCAAGAAAAAGACCTA +
Preference number: 2 (lower is better)
Translates to: PESRSQWVSGPPWSSANSSSTSS*SQEKDL
Trigger: TAGGTCTTTTTCTTGGCTTCAAGAGGAGGTTGAGGA...AGAATTAGCAGAGCTCCAAGGAGGACCAGAGACCCACTGGCTTCTGCTCTCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
3UTR-3UTR TCA 90 bp TGCTTCCTACCCCAGCAGCTGTCTAGTGCACTTGAACCACAAAATGGGCCCTCATTTCAGGGACACTCATaGGTGGCCACAGCACAAAAT +
Preference number: 2 (lower is better)
Translates to: CFLPQQLSSALEPQNGPSFQGHS*VATAQN
Trigger: ATTTTGTGCTGTGGCCACTCATGAGTGTCCCTGAAA...TGAGGGCCCATTTTGTGGTTCAAGTGCACTAGACAGCTGCTGGGGTAGGAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
3UTR-3UTR TCA 90 bp CAGTGTGGTAGCAGCATCGGCACAACCTCAAGTGGAACCCAGAGGGGACAAATTGGCTGCCATCTCTTATaGTTATTTCCTGTGTGGCTG +
Preference number: 2 (lower is better)
Translates to: QCGSSIGTTSSGTQRGQIGCHLL*LFPVWL
Trigger: CAGCCACACAGGAAATAATCATAAGAGATGGCAGCC...AATTTGTCCCCTCTGGGTTCCACTTGAGGTTGTGCCGATGCTGCTACCACACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406895.3
3UTR-3UTR GCA 90 bp AATTCTGGGAGGTCCAGGCAACATCAGAGCCACTTCCTGTTCCTGAGAGCAGAAATAAAGACTGAGCTCTaGTACACAGCAGCGAGCCTC +
Preference number: 2 (lower is better)
Translates to: NSGRSRQHQSHFLFLRAEIKTEL*YTAASL
Trigger: GAGGCTCGCTGCTGTGTAGCAGAGCTCAGTCTTTAT...TTCTGCTCTCAGGAACAGGAAGTGGCTCTGATGTTGCCTGGACCTCCCAGAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
3UTR-3UTR TCA 90 bp GCTGATTACAGACATTGCCTGTGCTTCCTACCCCAGCAGCTGTCTAGTGCACTTACAGCACCTGGACTGTaGGAAAAAGAGTCTCTGAAG +
Preference number: 2 (lower is better)
Translates to: ADYRHCLCFLPQQLSSALTAPGL*EKESLK
Trigger: CTTCAGAGACTCTTTTTCTCACAGTCCAGGTGCTGT...AAGTGCACTAGACAGCTGCTGGGGTAGGAAGCACAGGCAATGTCTGTAATCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406895.3
3UTR-3UTR GCA 90 bp TGTCTAGTGCACTTGAACCACAAAATGGGCCCTCACTTCTTTCCTAACCCAGCTTACAGACATTGCCTGTaGTTCCTACCCCAGCAGCTG +
Preference number: 2 (lower is better)
Translates to: CLVHLNHKMGPHFFPNPAYRHCL*FLPQQL
Trigger: CAGCTGCTGGGGTAGGAAGCACAGGCAATGTCTGTA...AGCTGGGTTAGGAAAGAAGTGAGGGCCCATTTTGTGGTTCAAGTGCACTAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
3UTR-3UTR CCA 90 bp GGGACACTCATGAGTGGCCACAGCACAAAATCCTGCAGTAGGACTTACCTGGGCGTTTTTAAGAGTACCTaGACCTTCGTCAGCCAGAAT +
Preference number: 2 (lower is better)
Translates to: GTLMSGHSTKSCSRTYLGVFKST*TFVSQN
Trigger: ATTCTGGCTGACGAAGGTCCAGGTACTCTTAAAAAC...GCCCAGGTAAGTCCTACTGCAGGATTTTGTGCTGTGGCCACTCATGAGTGTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
3UTR-3UTR CCA 90 bp GCTGATTACAGACATTGCCTGTGCTTCCTACCCCAGCAGCTGTCTAGTGCACTTGAAGGCAGTGAGAAGTaGTGTTACCATCTGAAGTGG +
Preference number: 2 (lower is better)
Translates to: ADYRHCLCFLPQQLSSALEGSEK*CYHLKW
Trigger: CCACTTCAGATGGTAACACCACTTCTCACTGCCTTC...AAGTGCACTAGACAGCTGCTGGGGTAGGAAGCACAGGCAATGTCTGTAATCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
3UTR-3UTR CCA 90 bp AAATTCTGGGAGGTCCAGGCAACATCAGAGCCACTTCCTGTTCCTGAGAGCAGAGCCATGCCATCTACATaGTTACAACAGCCAGTGGTA +
Preference number: 2 (lower is better)
Translates to: KFWEVQATSEPLPVPESRAMPST*LQQPVV
Trigger: TACCACTGGCTGTTGTAACCATGTAGATGGCATGGC...TCTGCTCTCAGGAACAGGAAGTGGCTCTGATGTTGCCTGGACCTCCCAGAATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406895.3
3UTR-3UTR GCA 90 bp AGGGTTTGGTTTAAATTCTGGGAGGTCCAGGCAACATCAGAGCCACTTCCTGTTATAAAGACTGAGCTCTaGTACACAGCAGCGAGCCTC +
Preference number: 2 (lower is better)
Translates to: RVWFKFWEVQATSEPLPVIKTEL*YTAASL
Trigger: GAGGCTCGCTGCTGTGTAGCAGAGCTCAGTCTTTAT...AACAGGAAGTGGCTCTGATGTTGCCTGGACCTCCCAGAATTTAAACCAAACCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
3UTR-3UTR CCA 90 bp GAAACAATTTATCTGCAGATGCCTAGCCACTCACTGATCAATTTGTTATGCGCCAAGCCAGTGGGTCTCTaGTCCTCCTTGGAGCTCTGC +
Preference number: 2 (lower is better)
Translates to: ETIYLQMPSHSLINLLCAKPVGL*SSLELC
Trigger: GCAGAGCTCCAAGGAGGACCAGAGACCCACTGGCTT...GGCGCATAACAAATTGATCAGTGAGTGGCTAGGCATCTGCAGATAAATTGTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
3UTR-3UTR CCA 90 bp GAGTACCTGGACCTTCGTCAGCCAGAATTTGTTAAGGAAGCAAGAGGGTTTGGTGGTTACAACAGCCAGTaGTATCTAAACTGGGGGCAG +
Preference number: 2 (lower is better)
Translates to: EYLDLRQPEFVKEARGFGGYNSQ*YLNWGQ
Trigger: CTGCCCCCAGTTTAGATACCACTGGCTGTTGTAACC...ACCAAACCCTCTTGCTTCCTTAACAAATTCTGGCTGACGAAGGTCCAGGTACTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406895.3
3UTR-3UTR TCA 90 bp TTAAATTCTGGGAGGTCCAGGCAACATCAGAGCCACTTCCTGTTCCTGAGAGCAGAGAAAAAGAGTCTCTaGAGACATCTGACCTGGACA +
Preference number: 2 (lower is better)
Translates to: LNSGRSRQHQSHFLFLRAEKKSL*RHLTWT
Trigger: TGTCCAGGTCAGATGTCTTCAGAGACTCTTTTTCTC...TGCTCTCAGGAACAGGAAGTGGCTCTGATGTTGCCTGGACCTCCCAGAATTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406895.3
3UTR-3UTR TCA 90 bp TTCAAGATAATTGTGATTTCATCGCACCCCAGATACTTCCAAGTGGAGCCAGGCCCATCTAATAAAGACTaGGCTCTGCTACACAGCAGC +
Preference number: 2 (lower is better)
Translates to: FKIIVISSHPRYFQVEPGPSNKD*ALLHSS
Trigger: GCTGCTGTGTAGCAGAGCTCAGTCTTTATTAGATGG...GCCTGGCTCCACTTGGAAGTATCTGGGGTGCGATGAAATCACAATTATCTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
3UTR-3UTR GCA 90 bp GTAACAGACAGACAGGAGTCCCCAAGGGCACAAAATAGTTTCTTTCCAGATGATGCTGATTACAGACATTaGCTGTGCTTCCTACCCCAG +
Preference number: 2 (lower is better)
Translates to: VTDRQESPRAQNSFFPDDADYRH*LCFLPQ
Trigger: CTGGGGTAGGAAGCACAGGCAATGTCTGTAATCAGC...ATCATCTGGAAAGAAACTATTTTGTGCCCTTGGGGACTCCTGTCTGTCTGTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
3UTR-3UTR CCA 90 bp ATCGGCACAACCTCAAGTGGAACCCAGAGGGGACAAATTCCCTTGAAATTTCATGCTTCAATGCAGCTTTaGACAAGGGACACAAAGCCT +
Preference number: 2 (lower is better)
Translates to: IGTTSSGTQRGQIPLKFHASMQL*TRDTKP
Trigger: AGGCTTTGTGTCCCTTGTCCAAAGCTGCATTGAAGC...ATGAAATTTCAAGGGAATTTGTCCCCTCTGGGTTCCACTTGAGGTTGTGCCGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
3UTR-3UTR CCA 90 bp CCCACATTGATCTTAGTTAACAGTCTTGTAGTTCCCTCTTTAGGCTTCAAGATAGAGAGCAGAAGCCAGTaGGTCTCTGGTCCTCCTTGG +
Preference number: 2 (lower is better)
Translates to: PTLILVNSLVVPSLGFKIESRSQ*VSGPPW
Trigger: CCAAGGAGGACCAGAGACCCACTGGCTTCTGCTCTC...TATCTTGAAGCCTAAAGAGGGAACTACAAGACTGTTAACTAAGATCAATGTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
3UTR-3UTR GCA 90 bp ATAATTGTGATTTCATCGCACCCCAGATACTTCCAAGTGGAGCCAGGCCTCAGACTGAAACAATTTATCTaGAGATGCCTAGCCACTCAC +
Preference number: 2 (lower is better)
Translates to: IIVISSHPRYFQVEPGLRLKQFI*RCLATH
Trigger: GTGAGTGGCTAGGCATCTGCAGATAAATTGTTTCAG...TCTGAGGCCTGGCTCCACTTGGAAGTATCTGGGGTGCGATGAAATCACAATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
3UTR-3UTR CCA 90 bp CAGTGTGGTAGCAGCATCGGCACAACCTCAAGTGGAACCCAGAGGGGACAAATTTCTGCTAATTCTTGCTaGTTTGAGGTTAATATGCTA +
Preference number: 2 (lower is better)
Translates to: QCGSSIGTTSSGTQRGQISANSC*FEVNML
Trigger: TAGCATATTAACCTCAAACCAGCAAGAATTAGCAGA...AATTTGTCCCCTCTGGGTTCCACTTGAGGTTGTGCCGATGCTGCTACCACACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
3UTR-3UTR CCA 90 bp AAGAGGGTTTGGTTTAAATTCTGGGAGGTCCAGGCAACATCAGAGCCACTTCCTGTTTTTAAGAGTACCTaGACCTTCGTCAGCCAGAAT +
Preference number: 2 (lower is better)
Translates to: KRVWFKFWEVQATSEPLPVFKST*TFVSQN
Trigger: ATTCTGGCTGACGAAGGTCCAGGTACTCTTAAAAAC...AGGAAGTGGCTCTGATGTTGCCTGGACCTCCCAGAATTTAAACCAAACCCTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
3UTR-3UTR GCA 90 bp GTAACAGACAGACAGGAGTCCCCAAGGGCACAAAATAGTTTCTTTCCAGATGATCTAAGACAGCTTCAATaGAGCTTTGGACAAGGGACA +
Preference number: 2 (lower is better)
Translates to: VTDRQESPRAQNSFFPDDLRQLQ*SFGQGT
Trigger: TGTCCCTTGTCCAAAGCTGCATTGAAGCTGTCTTAG...ATCATCTGGAAAGAAACTATTTTGTGCCCTTGGGGACTCCTGTCTGTCTGTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
3UTR-3UTR GCA 90 bp ATAATTGTGATTTCATCGCACCCCAGATACTTCCAAGTGGAGCCAGGCCTCAGACTGATCAATTTGTTATaGGCCGTGACTGAAATCTGT +
Preference number: 2 (lower is better)
Translates to: IIVISSHPRYFQVEPGLRLINLL*AVTEIC
Trigger: ACAGATTTCAGTCACGGCGCATAACAAATTGATCAG...TCTGAGGCCTGGCTCCACTTGGAAGTATCTGGGGTGCGATGAAATCACAATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
3UTR-3UTR GCA 90 bp TTCAAGATAATTGTGATTTCATCGCACCCCAGATACTTCCAAGTGGAGCCAGGCCTGAAACAATTTATCTaGAGATGCCTAGCCACTCAC +
Preference number: 2 (lower is better)
Translates to: FKIIVISSHPRYFQVEPGLKQFI*RCLATH
Trigger: GTGAGTGGCTAGGCATCTGCAGATAAATTGTTTCAG...GCCTGGCTCCACTTGGAAGTATCTGGGGTGCGATGAAATCACAATTATCTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
3UTR-3UTR CCA 90 bp GAAACAATTTATCTGCAGATGCCTAGCCACTCACTGATCAATTTGTTATGCGCCGAAGGCAGTGAGAAGTaGTGTTACCATCTGAAGTGG +
Preference number: 2 (lower is better)
Translates to: ETIYLQMPSHSLINLLCAEGSEK*CYHLKW
Trigger: CCACTTCAGATGGTAACACCACTTCTCACTGCCTTC...GGCGCATAACAAATTGATCAGTGAGTGGCTAGGCATCTGCAGATAAATTGTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
3UTR-3UTR TCA 90 bp CCCACATTGATCTTAGTTAACAGTCTTGTAGTTCCCTCTTTAGGCTTCAAGATATGCCTAGCCACTCACTaGTCAATTTGTTATGCGCCG +
Preference number: 2 (lower is better)
Translates to: PTLILVNSLVVPSLGFKICLATH*SICYAP
Trigger: CGGCGCATAACAAATTGATCAGTGAGTGGCTAGGCA...TATCTTGAAGCCTAAAGAGGGAACTACAAGACTGTTAACTAAGATCAATGTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
3UTR-3UTR GCA 90 bp GTAACAGACAGACAGGAGTCCCCAAGGGCACAAAATAGTTTCTTTCCAGATGATGCAGATATCAAGCCATaGCATCTACATGGTTACAAC +
Preference number: 2 (lower is better)
Translates to: VTDRQESPRAQNSFFPDDADIKP*HLHGYN
Trigger: GTTGTAACCATGTAGATGGCATGGCTTGATATCTGC...ATCATCTGGAAAGAAACTATTTTGTGCCCTTGGGGACTCCTGTCTGTCTGTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406895.3
3UTR-3UTR TCA 90 bp TTTAGGCTTCAAGATAATTGTGATTTCATCGCACCCCAGATACTTCCAAGTGGATGGAGCTTCTATGGCTaGAACAATTTATCTGCAGAT +
Preference number: 2 (lower is better)
Translates to: FRLQDNCDFIAPQILPSGWSFYG*NNLSAD
Trigger: ATCTGCAGATAAATTGTTTCAGCCATAGAAGCTCCA...TCCACTTGGAAGTATCTGGGGTGCGATGAAATCACAATTATCTTGAAGCCTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
3UTR-3UTR CCA 90 bp ATAATATTGTTTTGTTCTGAGAATTCTGCCCTTAGTCAAAACCACACAGTCATGGCTTCAATGCAGCTTTaGACAAGGGACACAAAGCCT +
Preference number: 2 (lower is better)
Translates to: IILFCSENSALSQNHTVMASMQL*TRDTKP
Trigger: AGGCTTTGTGTCCCTTGTCCAAAGCTGCATTGAAGC...CATGACTGTGTGGTTTTGACTAAGGGCAGAATTCTCAGAACAAAACAATATTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
3UTR-3UTR TCA 90 bp TTTAGGCTTCAAGATAATTGTGATTTCATCGCACCCCAGATACTTCCAAGTGGATACCTCAGATTCGGTTaGATTTCTAACTTCCTGAAA +
Preference number: 2 (lower is better)
Translates to: FRLQDNCDFIAPQILPSGYLRFG*ISNFLK
Trigger: TTTCAGGAAGTTAGAAATTCAACCGAATCTGAGGTA...TCCACTTGGAAGTATCTGGGGTGCGATGAAATCACAATTATCTTGAAGCCTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
3UTR GCA 72 bp CCAGGAGAGCCGACCATGGCAAGCGCTTCGCCTGAGTaGAGTGGGAGTCTCATTGGCGAGTGTCCAGTGTCA +
Preference number: 3 (lower is better)
Translates to: PGEPTMASASPE*SGSLIGECPVS
Trigger: TGACACTGGACACTCGCCAATGAGACTCCCACTGCACTCAGGCGAAGCGCTTGCCATGGTCGGCTCTCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
3UTR CCA 72 bp TCAGGGGAAACAGGGGGAAACCAGGAGAGCCGACCATaGCAAGCGCTTCGCCTGAGTGCAGTGGGAGTCTCA +
Preference number: 3 (lower is better)
Translates to: SGETGGNQESRP*QALRLSAVGVS
Trigger: TGAGACTCCCACTGCACTCAGGCGAAGCGCTTGCCATGGTCGGCTCTCCTGGTTTCCCCCTGTTTCCCCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
3UTR TCA 72 bp GAAACCAGGAGAGCCGACCATGGCAAGCGCTTCGCCTaGGTGCAGTGGGAGTCTCATTGGCGAGTGTCCAGT +
Preference number: 3 (lower is better)
Translates to: ETRRADHGKRFA*VQWESHWRVSS
Trigger: ACTGGACACTCGCCAATGAGACTCCCACTGCACTCAGGCGAAGCGCTTGCCATGGTCGGCTCTCCTGGTTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
3UTR CCA 72 bp GTGGCCACAGCACAAAATCCTGCAGTAGGACTTACCTaGGCTCGACAGTGTGGTAGCAGCATCGGCACAACC +
Preference number: 3 (lower is better)
Translates to: VATAQNPAVGLT*ARQCGSSIGTT
Trigger: GGTTGTGCCGATGCTGCTACCACACTGTCGAGCCCAGGTAAGTCCTACTGCAGGATTTTGTGCTGTGGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
3UTR GCA 72 bp CCAAGTGGAGCCAGGCCTCAGACTGTTCTCAGTCACTaGTCTCCCACAGCTGATTACAGACATTGCCTGTGC +
Preference number: 3 (lower is better)
Translates to: PSGARPQTVLSH*SPTADYRHCLC
Trigger: GCACAGGCAATGTCTGTAATCAGCTGTGGGAGAGCAGTGACTGAGAACAGTCTGAGGCCTGGCTCCACTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
3UTR TCA 72 bp GCCTCAGACTGTTCTCAGTCACTGCTCTCCCACAGCTaGTTACAGACATTGCCTGTGCTTCCTACCCCAGCA +
Preference number: 3 (lower is better)
Translates to: ASDCSQSLLSHS*LQTLPVLPTPA
Trigger: TGCTGGGGTAGGAAGCACAGGCAATGTCTGTAATCAGCTGTGGGAGAGCAGTGACTGAGAACAGTCTGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
3UTR GCA 72 bp CTCAGTCACTGCTCTCCCACAGCTGATTACAGACATTaGCTGTGCTTCCTACCCCAGCAGCTGTCTAGTGCA +
Preference number: 3 (lower is better)
Translates to: LSHCSPTADYRH*LCFLPQQLSSA
Trigger: TGCACTAGACAGCTGCTGGGGTAGGAAGCACAGGCAATGTCTGTAATCAGCTGTGGGAGAGCAGTGACTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
3UTR GCA 72 bp CACCACTTTCGGAGCCATCTAATAAAGACTGAGCTCTaGTACACAGCAGCGAGCCTCAGCTCAGGGGAAACA +
Preference number: 3 (lower is better)
Translates to: HHFRSHLIKTEL*YTAASLSSGET
Trigger: TGTTTCCCCTGAGCTGAGGCTCGCTGCTGTGTAGCAGAGCTCAGTCTTTATTAGATGGCTCCGAAAGTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
3UTR GCA 72 bp CACTGCTCTCCCACAGCTGATTACAGACATTGCCTGTaGTTCCTACCCCAGCAGCTGTCTAGTGCACTTGAA +
Preference number: 3 (lower is better)
Translates to: HCSPTADYRHCL*FLPQQLSSALE
Trigger: TTCAAGTGCACTAGACAGCTGCTGGGGTAGGAAGCACAGGCAATGTCTGTAATCAGCTGTGGGAGAGCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
3UTR-3UTR CAA 90 bp TTAAATTCTGGGAGGTCCAGGCAACATCAGAGCCACTTCCTGTTCCTGAGAGCAGCAGTGGGAGTCTCATaGGCGAGTGTCCAGTGTCAA +
Preference number: 3 (lower is better)
Translates to: LNSGRSRQHQSHFLFLRAAVGVS*ASVQCQ
Trigger: TTGACACTGGACACTCGCCAATGAGACTCCCACTGC...TGCTCTCAGGAACAGGAAGTGGCTCTGATGTTGCCTGGACCTCCCAGAATTTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
3UTR-3UTR CAA 90 bp TGCTCTCCCACAGCTGATTACAGACATTGCCTGTGCTTCCTACCCCAGCAGCTGAGTGTCAAGCAGGCCTaGTTTGTAATGGTCTCATCT +
Preference number: 3 (lower is better)
Translates to: CSPTADYRHCLCFLPQQLSVKQA*FVMVSS
Trigger: AGATGAGACCATTACAAACAAGGCCTGCTTGACACT...CAGCTGCTGGGGTAGGAAGCACAGGCAATGTCTGTAATCAGCTGTGGGAGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
3UTR-3UTR CAA 90 bp GTCACTGCTCTCCCACAGCTGATTACAGACATTGCCTGTGCTTCCTACCCCAGCTTCGTCAGCCAGAATTaGTTAAGGAAGCAAGAGGGT +
Preference number: 3 (lower is better)
Translates to: VTALPQLITDIACASYPSFVSQN*LRKQEG
Trigger: ACCCTCTTGCTTCCTTAACAAATTCTGGCTGACGAA...GCTGGGGTAGGAAGCACAGGCAATGTCTGTAATCAGCTGTGGGAGAGCAGTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
3UTR CCA 72 bp CCTGAGAGCAGAAGCCAGTGGGTCTCTGGTCCTCCTTaGAGCTCTGCTAATTCTTGCTGGTTTGAGGTTAAT +
Preference number: 3 (lower is better)
Translates to: PESRSQWVSGPP*SSANSCWFEVN
Trigger: ATTAACCTCAAACCAGCAAGAATTAGCAGAGCTCCAAGGAGGACCAGAGACCCACTGGCTTCTGCTCTCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
3UTR-3UTR CAA 90 bp TTCAAGATAATTGTGATTTCATCGCACCCCAGATACTTCCAAGTGGAGCCAGGCGCAGTGGGAGTCTCATaGGCGAGTGTCCAGTGTCAA +
Preference number: 3 (lower is better)
Translates to: FKIIVISSHPRYFQVEPGAVGVS*ASVQCQ
Trigger: TTGACACTGGACACTCGCCAATGAGACTCCCACTGC...GCCTGGCTCCACTTGGAAGTATCTGGGGTGCGATGAAATCACAATTATCTTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
3UTR-3UTR CAA 90 bp ATAATTGTGATTTCATCGCACCCCAGATACTTCCAAGTGGAGCCAGGCCTCAGAAGCTTCAATGCAGCTTaGGACAAGGGACACAAAGCC +
Preference number: 3 (lower is better)
Translates to: IIVISSHPRYFQVEPGLRSFNAA*DKGHKA
Trigger: GGCTTTGTGTCCCTTGTCCAAAGCTGCATTGAAGCT...TCTGAGGCCTGGCTCCACTTGGAAGTATCTGGGGTGCGATGAAATCACAATTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
3UTR-3UTR CAA 90 bp ATAATTGTGATTTCATCGCACCCCAGATACTTCCAAGTGGAGCCAGGCCTCAGAAGCTGTCTAGTGCACTaGAACCACAAAATGGGCCCT +
Preference number: 3 (lower is better)
Translates to: IIVISSHPRYFQVEPGLRSCLVH*NHKMGP
Trigger: AGGGCCCATTTTGTGGTTCAAGTGCACTAGACAGCT...TCTGAGGCCTGGCTCCACTTGGAAGTATCTGGGGTGCGATGAAATCACAATTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
3UTR-3UTR CAA 90 bp GTCAAGCAGGCCTTGTTTGTAATGGTCTCATCTGAAGAGCTACACAGCAAGGACAGTGTCAAGCAGGCCTaGTTTGTAATGGTCTCATCT +
Preference number: 3 (lower is better)
Translates to: VKQALFVMVSSEELHSKDSVKQA*FVMVSS
Trigger: AGATGAGACCATTACAAACAAGGCCTGCTTGACACT...GTCCTTGCTGTGTAGCTCTTCAGATGAGACCATTACAAACAAGGCCTGCTTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
3UTR-3UTR CAA 90 bp ATAATTGTGATTTCATCGCACCCCAGATACTTCCAAGTGGAGCCAGGCCTCAGACACTCACTGATCAATTaGTTATGCGCCGTGACTGAA +
Preference number: 3 (lower is better)
Translates to: IIVISSHPRYFQVEPGLRHSLIN*LCAVTE
Trigger: TTCAGTCACGGCGCATAACAAATTGATCAGTGAGTG...TCTGAGGCCTGGCTCCACTTGGAAGTATCTGGGGTGCGATGAAATCACAATTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
3UTR GCA 72 bp GAGCTACACAGCAAGGACACTGCAGATATCAAGCCATaGCATCTACATGGTTACAACAGCCAGTGGTATCTA +
Preference number: 3 (lower is better)
Translates to: ELHSKDTADIKP*HLHGYNSQWYL
Trigger: TAGATACCACTGGCTGTTGTAACCATGTAGATGGCATGGCTTGATATCTGCAGTGTCCTTGCTGTGTAGCTC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406895.3
3UTR TCA 72 bp ACCTGGACTGTGAGAAAAAGAGTCTCTGAAGACATCTaGCCTGGACAGGCTGCCATCTCTTATGATTATTTC +
Preference number: 3 (lower is better)
Translates to: TWTVRKRVSEDI*PGQAAISYDYF
Trigger: GAAATAATCATAAGAGATGGCAGCCTGTCCAGGTCAGATGTCTTCAGAGACTCTTTTTCTCACAGTCCAGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406895.3
3UTR TCA 72 bp CTGAGAATTCTGCCCTTAGTCAAAACCACACAGTCATaGATACATAAACACCACTTTCGGAGCCATCTAATA +
Preference number: 3 (lower is better)
Translates to: LRILPLVKTTQS*IHKHHFRSHLI
Trigger: TATTAGATGGCTCCGAAAGTGGTGTTTATGTATTCATGACTGTGTGGTTTTGACTAAGGGCAGAATTCTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR GCA 90 bp TGGCAAGCGCTTCGCCTGAGTGCAGTGGGAGTCTCATTGGCGAGTGTCCAGTGTAAGAATGCAGGCTGCTaGCTACTGCCACCACCAGCC +
Preference number: 4 (lower is better)
Translates to: WQALRLSAVGVSLASVQCKNAGC*LLPPPA
Trigger: GGCTGGTGGTGGCAGTAGGCAGCAGCCTGCATTCTT...ACACTGGACACTCGCCAATGAGACTCCCACTGCACTCAGGCGAAGCGCTTGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR TCA 90 bp GGGACACTCATGAGTGGCCACAGCACAAAATCCTGCAGTAGGACTTACCTGGGCGGCAAGCGCTTCGCCTaGGTGCAGTGGGAGTCTCAT +
Preference number: 4 (lower is better)
Translates to: GTLMSGHSTKSCSRTYLGGKRFA*VQWESH
Trigger: ATGAGACTCCCACTGCACTCAGGCGAAGCGCTTGCC...GCCCAGGTAAGTCCTACTGCAGGATTTTGTGCTGTGGCCACTCATGAGTGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR CCA 90 bp TGGCAAGCGCTTCGCCTGAGTGCAGTGGGAGTCTCATTGGCGAGTGTCCAGTGTTCCAGTGTGCTGGTGTaGTCTGGTGTGCTGCTGTGT +
Preference number: 4 (lower is better)
Translates to: WQALRLSAVGVSLASVQCSSVLV*SGVLLC
Trigger: ACACAGCAGCACACCAGACCACACCAGCACACTGGA...ACACTGGACACTCGCCAATGAGACTCCCACTGCACTCAGGCGAAGCGCTTGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR TCA 90 bp CTGAGCTCTGCTACACAGCAGCGAGCCTCAGCTCAGGGGAAACAGGGGGAAACCGTCAGGGCTCTTACCTaGCTAAGCTGGTACTTTAGC +
Preference number: 4 (lower is better)
Translates to: LSSATQQRASAQGKQGETVRALT*LSWYFS
Trigger: GCTAAAGTACCAGCTTAGTCAGGTAAGAGCCCTGAC...GGTTTCCCCCTGTTTCCCCTGAGCTGAGGCTCGCTGCTGTGTAGCAGAGCTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR GCA 90 bp CTGAGCTCTGCTACACAGCAGCGAGCCTCAGCTCAGGGGAAACAGGGGGAAACCTATAAGAATGCAGGCTaGTGCCTACTGCCACCACCA +
Preference number: 4 (lower is better)
Translates to: LSSATQQRASAQGKQGETYKNAG*CLLPPP
Trigger: TGGTGGTGGCAGTAGGCAGCAGCCTGCATTCTTATA...GGTTTCCCCCTGTTTCCCCTGAGCTGAGGCTCGCTGCTGTGTAGCAGAGCTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR CCA 90 bp CCTGAGAGCAGAAGCCAGTGGGTCTCTGGTCCTCCTTGGAGCTCTGCTAATTCTGGCAGCGATGCTGGCTaGGTAACAGGCTCAGCATCT +
Preference number: 4 (lower is better)
Translates to: PESRSQWVSGPPWSSANSGSDAG*VTGSAS
Trigger: AGATGCTGAGCCTGTTACCCAGCCAGCATCGCTGCC...AGAATTAGCAGAGCTCCAAGGAGGACCAGAGACCCACTGGCTTCTGCTCTCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR CCA 90 bp CCTGAGAGCAGAAGCCAGTGGGTCTCTGGTCCTCCTTGGAGCTCTGCTAATTCTAAGCCAGTGGGTCTCTaGTCCTCCTTGGAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: PESRSQWVSGPPWSSANSKPVGL*SSLELC
Trigger: GCAGAGCTCCAAGGAGGACCAGAGACCCACTGGCTT...AGAATTAGCAGAGCTCCAAGGAGGACCAGAGACCCACTGGCTTCTGCTCTCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR CCA 90 bp GGGACACTCATGAGTGGCCACAGCACAAAATCCTGCAGTAGGACTTACCTGGGCGAGAGCAGAAGCCAGTaGGTCTCTGGTCCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: GTLMSGHSTKSCSRTYLGESRSQ*VSGPPW
Trigger: CCAAGGAGGACCAGAGACCCACTGGCTTCTGCTCTC...GCCCAGGTAAGTCCTACTGCAGGATTTTGTGCTGTGGCCACTCATGAGTGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
3UTR CAA 72 bp TGGCAAGCGCTTCGCCTGAGTGCAGTGGGAGTCTCATaGGCGAGTGTCCAGTGTCAAGCAGGCCTTGTTTGT +
Preference number: 4 (lower is better)
Translates to: WQALRLSAVGVS*ASVQCQAGLVC
Trigger: ACAAACAAGGCCTGCTTGACACTGGACACTCGCCAATGAGACTCCCACTGCACTCAGGCGAAGCGCTTGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR TCA 90 bp CCTGAGAGCAGAAGCCAGTGGGTCTCTGGTCCTCCTTGGAGCTCTGCTAATTCTAGTCCACAGTTGCTGTaGTGGAGCAGACGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: PESRSQWVSGPPWSSANSSPQLL*WSRRGC
Trigger: ACAGCCACGTCTGCTCCATCACAGCAACTGTGGACT...AGAATTAGCAGAGCTCCAAGGAGGACCAGAGACCCACTGGCTTCTGCTCTCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR GCA 90 bp AGCAGCATCGGCACAACCTCAAGTGGAACCCAGAGGGGACAAATTCCCTTGAAATGGTGTGGTCTGGTGTaGTGCTGTGTCTGGGCAGCG +
Preference number: 4 (lower is better)
Translates to: SSIGTTSSGTQRGQIPLKWCGLV*CCVWAA
Trigger: CGCTGCCCAGACACAGCAGCACACCAGACCACACCA...TTTCAAGGGAATTTGTCCCCTCTGGGTTCCACTTGAGGTTGTGCCGATGCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR GCA 90 bp AATTCTGGGAGGTCCAGGCAACATCAGAGCCACTTCCTGTTCCTGAGAGCAGAATGGTGTGGTCTGGTGTaGTGCTGTGTCTGGGCAGCG +
Preference number: 4 (lower is better)
Translates to: NSGRSRQHQSHFLFLRAEWCGLV*CCVWAA
Trigger: CGCTGCCCAGACACAGCAGCACACCAGACCACACCA...TTCTGCTCTCAGGAACAGGAAGTGGCTCTGATGTTGCCTGGACCTCCCAGAATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR CCA 90 bp TCTCCCACAGCTGATTACAGACATTGCCTGTGCTTCCTACCCCAGCAGCTGTCTGGCAGCGATGCTGGCTaGGTAACAGGCTCAGCATCT +
Preference number: 4 (lower is better)
Translates to: SPTADYRHCLCFLPQQLSGSDAG*VTGSAS
Trigger: AGATGCTGAGCCTGTTACCCAGCCAGCATCGCTGCC...AGACAGCTGCTGGGGTAGGAAGCACAGGCAATGTCTGTAATCAGCTGTGGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR CCA 90 bp GCTGATTACAGACATTGCCTGTGCTTCCTACCCCAGCAGCTGTCTAGTGCACTTTCTGGGCAGCGATGCTaGCTGGGTAACAGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: ADYRHCLCFLPQQLSSALSGQRC*LGNRLS
Trigger: GCTGAGCCTGTTACCCAGCCAGCATCGCTGCCCAGA...AAGTGCACTAGACAGCTGCTGGGGTAGGAAGCACAGGCAATGTCTGTAATCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR CCA 90 bp AAATTCTGGGAGGTCCAGGCAACATCAGAGCCACTTCCTGTTCCTGAGAGCAGAGAGGCTCCAGTGTGCTaGTGTGGTCTGGTGTGCTGC +
Preference number: 4 (lower is better)
Translates to: KFWEVQATSEPLPVPESREAPVC*CGLVCC
Trigger: GCAGCACACCAGACCACACCAGCACACTGGAGCCTC...TCTGCTCTCAGGAACAGGAAGTGGCTCTGATGTTGCCTGGACCTCCCAGAATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR CCA 90 bp AGCAGCATCGGCACAACCTCAAGTGGAACCCAGAGGGGACAAATTCCCTTGAAAGAGGCTCCAGTGTGCTaGTGTGGTCTGGTGTGCTGC +
Preference number: 4 (lower is better)
Translates to: SSIGTTSSGTQRGQIPLKEAPVC*CGLVCC
Trigger: GCAGCACACCAGACCACACCAGCACACTGGAGCCTC...TTTCAAGGGAATTTGTCCCCTCTGGGTTCCACTTGAGGTTGTGCCGATGCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR CCA 90 bp TGGCAAGCGCTTCGCCTGAGTGCAGTGGGAGTCTCATTGGCGAGTGTCCAGTGTGGTTACAACAGCCAGTaGTATCTAAACTGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: WQALRLSAVGVSLASVQCGYNSQ*YLNWGQ
Trigger: CTGCCCCCAGTTTAGATACCACTGGCTGTTGTAACC...ACACTGGACACTCGCCAATGAGACTCCCACTGCACTCAGGCGAAGCGCTTGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR CCA 90 bp AGCAGCATCGGCACAACCTCAAGTGGAACCCAGAGGGGACAAATTCCCTTGAAACAGGAGAGCCGACCATaGCAAGCGCTTCGCCTGAGT +
Preference number: 4 (lower is better)
Translates to: SSIGTTSSGTQRGQIPLKQESRP*QALRLS
Trigger: ACTCAGGCGAAGCGCTTGCCATGGTCGGCTCTCCTG...TTTCAAGGGAATTTGTCCCCTCTGGGTTCCACTTGAGGTTGTGCCGATGCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR CCA 90 bp GCAGAAGCCAGTGGGTCTCTGGTCCTCCTTGGAGCTCTGCTAATTCTTGCTGGTGCAGTAGGACTTACCTaGGCTCGACAGTGTGGTAGC +
Preference number: 4 (lower is better)
Translates to: AEASGSLVLLGALLILAGAVGLT*ARQCGS
Trigger: GCTACCACACTGTCGAGCCCAGGTAAGTCCTACTGC...ACCAGCAAGAATTAGCAGAGCTCCAAGGAGGACCAGAGACCCACTGGCTTCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR GCA 90 bp TGCTCTCCCACAGCTGATTACAGACATTGCCTGTGCTTCCTACCCCAGCAGCTGATAGCACATTTTGGGTaGCACACACAGCCCTGGGGA +
Preference number: 4 (lower is better)
Translates to: CSPTADYRHCLCFLPQQLIAHFG*HTQPWG
Trigger: TCCCCAGGGCTGTGTGTGGCACCCAAAATGTGCTAT...CAGCTGCTGGGGTAGGAAGCACAGGCAATGTCTGTAATCAGCTGTGGGAGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR GCA 90 bp GGGACACTCATGAGTGGCCACAGCACAAAATCCTGCAGTAGGACTTACCTGGGCTACAGACATTGCCTGTaGTTCCTACCCCAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: GTLMSGHSTKSCSRTYLGYRHCL*FLPQQL
Trigger: CAGCTGCTGGGGTAGGAAGCACAGGCAATGTCTGTA...GCCCAGGTAAGTCCTACTGCAGGATTTTGTGCTGTGGCCACTCATGAGTGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR CCA 90 bp AGCAGCATCGGCACAACCTCAAGTGGAACCCAGAGGGGACAAATTCCCTTGAAAACACCAATCTCTCTGTaGCCGCCCAACATCACGCCG +
Preference number: 4 (lower is better)
Translates to: SSIGTTSSGTQRGQIPLKTPISL*PPNITP
Trigger: CGGCGTGATGTTGGGCGGCCACAGAGAGATTGGTGT...TTTCAAGGGAATTTGTCCCCTCTGGGTTCCACTTGAGGTTGTGCCGATGCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295148.9
CDS-3UTR CCA 90 bp TCTCCCACAGCTGATTACAGACATTGCCTGTGCTTCCTACCCCAGCAGCTGTCTATCATCTGCAACAGGTaGGGCCCAGGACAACCCACA +
Preference number: 4 (lower is better)
Translates to: SPTADYRHCLCFLPQQLSIICNR*GPGQPT
Trigger: TGTGGGTTGTCCTGGGCCCCACCTGTTGCAGATGAT...AGACAGCTGCTGGGGTAGGAAGCACAGGCAATGTCTGTAATCAGCTGTGGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR TCA 90 bp AGCAGCATCGGCACAACCTCAAGTGGAACCCAGAGGGGACAAATTCCCTTGAAACGTCAGCCATTTGCTTaGCTCCATAGGGCTGGGACA +
Preference number: 4 (lower is better)
Translates to: SSIGTTSSGTQRGQIPLKRQPFA*LHRAGT
Trigger: TGTCCCAGCCCTATGGAGTCAAGCAAATGGCTGACG...TTTCAAGGGAATTTGTCCCCTCTGGGTTCCACTTGAGGTTGTGCCGATGCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR TCA 90 bp ATAATTGTGATTTCATCGCACCCCAGATACTTCCAAGTGGAGCCAGGCCTCAGATGCGGCCCTGGGTGTTaGTGTCTGCCTTTACCTGGG +
Preference number: 4 (lower is better)
Translates to: IIVISSHPRYFQVEPGLRCGPGC*CLPLPG
Trigger: CCCAGGTAAAGGCAGACATCAACACCCAGGGCCGCA...TCTGAGGCCTGGCTCCACTTGGAAGTATCTGGGGTGCGATGAAATCACAATTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR TCA 90 bp GAGTCTCATTGGCGAGTGTCCAGTGTCAAGCAGGCCTTGTTTGTAATGGTCTCAGTCCAACATGCACAGTaGATGCGGCCCTGGGTGTTG +
Preference number: 4 (lower is better)
Translates to: ESHWRVSSVKQALFVMVSVQHAQ*MRPWVL
Trigger: CAACACCCAGGGCCGCATTCACTGTGCATGTTGGAC...TGAGACCATTACAAACAAGGCCTGCTTGACACTGGACACTCGCCAATGAGACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR TCA 90 bp CCTGAGAGCAGAAGCCAGTGGGTCTCTGGTCCTCCTTGGAGCTCTGCTAATTCTTGCCTAGCCACTCACTaGTCAATTTGTTATGCGCCG +
Preference number: 4 (lower is better)
Translates to: PESRSQWVSGPPWSSANSCLATH*SICYAP
Trigger: CGGCGCATAACAAATTGATCAGTGAGTGGCTAGGCA...AGAATTAGCAGAGCTCCAAGGAGGACCAGAGACCCACTGGCTTCTGCTCTCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR GCA 90 bp GAGTACCTGGACCTTCGTCAGCCAGAATTTGTTAAGGAAGCAAGAGGGTTTGGTGTGTCTGGGCAGCGATaGTGGCTGGGTAACAGGCTC +
Preference number: 4 (lower is better)
Translates to: EYLDLRQPEFVKEARGFGVSGQR*WLGNRL
Trigger: GAGCCTGTTACCCAGCCAGCATCGCTGCCCAGACAC...ACCAAACCCTCTTGCTTCCTTAACAAATTCTGGCTGACGAAGGTCCAGGTACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR GCA 90 bp TTAAATTCTGGGAGGTCCAGGCAACATCAGAGCCACTTCCTGTTCCTGAGAGCAAGCGCTTCGCCTGAGTaGAGTGGGAGTCTCATTGGC +
Preference number: 4 (lower is better)
Translates to: LNSGRSRQHQSHFLFLRASASPE*SGSLIG
Trigger: GCCAATGAGACTCCCACTGCACTCAGGCGAAGCGCT...TGCTCTCAGGAACAGGAAGTGGCTCTGATGTTGCCTGGACCTCCCAGAATTTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR GCA 90 bp CAGTGTGGTAGCAGCATCGGCACAACCTCAAGTGGAACCCAGAGGGGACAAATTTACAGACATTGCCTGTaGTTCCTACCCCAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: QCGSSIGTTSSGTQRGQIYRHCL*FLPQQL
Trigger: CAGCTGCTGGGGTAGGAAGCACAGGCAATGTCTGTA...AATTTGTCCCCTCTGGGTTCCACTTGAGGTTGTGCCGATGCTGCTACCACACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR GCA 90 bp GTCACTGCTCTCCCACAGCTGATTACAGACATTGCCTGTGCTTCCTACCCCAGCGCTGATTACAGACATTaGCTGTGCTTCCTACCCCAG +
Preference number: 4 (lower is better)
Translates to: VTALPQLITDIACASYPSADYRH*LCFLPQ
Trigger: CTGGGGTAGGAAGCACAGGCAATGTCTGTAATCAGC...GCTGGGGTAGGAAGCACAGGCAATGTCTGTAATCAGCTGTGGGAGAGCAGTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR CCA 90 bp GCCATGCCATCTACATGGTTACAACAGCCAGTGGTATCTAAACTGGGGGCAGCAGCAGTAGGACTTACCTaGGCTCGACAGTGTGGTAGC +
Preference number: 4 (lower is better)
Translates to: AMPSTWLQQPVVSKLGAAAVGLT*ARQCGS
Trigger: GCTACCACACTGTCGAGCCCAGGTAAGTCCTACTGC...TGCTGCCCCCAGTTTAGATACCACTGGCTGTTGTAACCATGTAGATGGCATGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406895.3
CDS-3UTR TCA 90 bp TTAAATTCTGGGAGGTCCAGGCAACATCAGAGCCACTTCCTGTTCCTGAGAGCATGGAGTCCCCAAACTTaGCCTCTCCACTGTGAAGCC +
Preference number: 4 (lower is better)
Translates to: LNSGRSRQHQSHFLFLRAWSPQT*PLHCEA
Trigger: GGCTTCACAGTGGAGAGGTCAAGTTTGGGGACTCCA...TGCTCTCAGGAACAGGAAGTGGCTCTGATGTTGCCTGGACCTCCCAGAATTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR TCA 90 bp GCTGATTACAGACATTGCCTGTGCTTCCTACCCCAGCAGCTGTCTAGTGCACTTACAGCTGCCACACAGTaGCATGCTTCTCATGCTGGA +
Preference number: 4 (lower is better)
Translates to: ADYRHCLCFLPQQLSSALTAATQ*HASHAG
Trigger: TCCAGCATGAGAAGCATGTCACTGTGTGGCAGCTGT...AAGTGCACTAGACAGCTGCTGGGGTAGGAAGCACAGGCAATGTCTGTAATCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR TCA 90 bp GAGTCTCATTGGCGAGTGTCCAGTGTCAAGCAGGCCTTGTTTGTAATGGTCTCACGTCAGCCATTTGCTTaGCTCCATAGGGCTGGGACA +
Preference number: 4 (lower is better)
Translates to: ESHWRVSSVKQALFVMVSRQPFA*LHRAGT
Trigger: TGTCCCAGCCCTATGGAGTCAAGCAAATGGCTGACG...TGAGACCATTACAAACAAGGCCTGCTTGACACTGGACACTCGCCAATGAGACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR TCA 90 bp TTAAATTCTGGGAGGTCCAGGCAACATCAGAGCCACTTCCTGTTCCTGAGAGCAAGTCCACAGTTGCTGTaGTGGAGCAGACGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: LNSGRSRQHQSHFLFLRASPQLL*WSRRGC
Trigger: ACAGCCACGTCTGCTCCATCACAGCAACTGTGGACT...TGCTCTCAGGAACAGGAAGTGGCTCTGATGTTGCCTGGACCTCCCAGAATTTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR TCA 90 bp GGGACACTCATGAGTGGCCACAGCACAAAATCCTGCAGTAGGACTTACCTGGGCAGCTATAGCAACCTGTaGGTCCACAGTTGCTGTGAT +
Preference number: 4 (lower is better)
Translates to: GTLMSGHSTKSCSRTYLGSYSNL*VHSCCD
Trigger: ATCACAGCAACTGTGGACTCACAGGTTGCTATAGCT...GCCCAGGTAAGTCCTACTGCAGGATTTTGTGCTGTGGCCACTCATGAGTGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR TCA 90 bp GGGACACTCATGAGTGGCCACAGCACAAAATCCTGCAGTAGGACTTACCTGGGCCACAAGGACCAAATGTaGAGAATCTTGGCCAGTTCC +
Preference number: 4 (lower is better)
Translates to: GTLMSGHSTKSCSRTYLGHKDQM*RILASS
Trigger: GGAACTGGCCAAGATTCTTCACATTTGGTCCTTGTG...GCCCAGGTAAGTCCTACTGCAGGATTTTGTGCTGTGGCCACTCATGAGTGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR TCA 90 bp TGCTCTCCCACAGCTGATTACAGACATTGCCTGTGCTTCCTACCCCAGCAGCTGCACAAGGACCAAATGTaGAGAATCTTGGCCAGTTCC +
Preference number: 4 (lower is better)
Translates to: CSPTADYRHCLCFLPQQLHKDQM*RILASS
Trigger: GGAACTGGCCAAGATTCTTCACATTTGGTCCTTGTG...CAGCTGCTGGGGTAGGAAGCACAGGCAATGTCTGTAATCAGCTGTGGGAGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR TCA 90 bp GCAGAAGCCAGTGGGTCTCTGGTCCTCCTTGGAGCTCTGCTAATTCTTGCTGGTCCAGGCCTTCCATTCTaGCTACTGGTATTAACTGTC +
Preference number: 4 (lower is better)
Translates to: AEASGSLVLLGALLILAGPGLPF*LLVLTV
Trigger: GACAGTTAATACCAGTAGTCAGAATGGAAGGCCTGG...ACCAGCAAGAATTAGCAGAGCTCCAAGGAGGACCAGAGACCCACTGGCTTCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR TCA 90 bp GGGACACTCATGAGTGGCCACAGCACAAAATCCTGCAGTAGGACTTACCTGGGCTGTAAGTTCTTTCTTTaGGGCAAACGAGGAGGCTCC +
Preference number: 4 (lower is better)
Translates to: GTLMSGHSTKSCSRTYLGCKFFL*GKRGGS
Trigger: GGAGCCTCCTCGTTTGCCTCAAAGAAAGAACTTACA...GCCCAGGTAAGTCCTACTGCAGGATTTTGTGCTGTGGCCACTCATGAGTGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR TCA 90 bp GTCACTGCTCTCCCACAGCTGATTACAGACATTGCCTGTGCTTCCTACCCCAGCAGGCCAAAAGTCTGCTaGACTGTACTGAGCCTTAGT +
Preference number: 4 (lower is better)
Translates to: VTALPQLITDIACASYPSRPKVC*TVLSLS
Trigger: ACTAAGGCTCAGTACAGTTCAGCAGACTTTTGGCCT...GCTGGGGTAGGAAGCACAGGCAATGTCTGTAATCAGCTGTGGGAGAGCAGTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295148.9
CDS-3UTR TCA 90 bp TTAAATTCTGGGAGGTCCAGGCAACATCAGAGCCACTTCCTGTTCCTGAGAGCAGTCTCTGAAGACATCTaGCCTGGACAGGCTGCCATC +
Preference number: 4 (lower is better)
Translates to: LNSGRSRQHQSHFLFLRAVSEDI*PGQAAI
Trigger: GATGGCAGCCTGTCCAGGTCAGATGTCTTCAGAGAC...TGCTCTCAGGAACAGGAAGTGGCTCTGATGTTGCCTGGACCTCCCAGAATTTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR TCA 90 bp TTCAAGATAATTGTGATTTCATCGCACCCCAGATACTTCCAAGTGGAGCCAGGCGGCAAGCGCTTCGCCTaGGTGCAGTGGGAGTCTCAT +
Preference number: 4 (lower is better)
Translates to: FKIIVISSHPRYFQVEPGGKRFA*VQWESH
Trigger: ATGAGACTCCCACTGCACTCAGGCGAAGCGCTTGCC...GCCTGGCTCCACTTGGAAGTATCTGGGGTGCGATGAAATCACAATTATCTTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR GCA 90 bp TATCTGCAGATGCCTAGCCACTCACTGATCAATTTGTTATGCGCCGTGACTGAAGTGTCTGGGCAGCGATaGTGGCTGGGTAACAGGCTC +
Preference number: 4 (lower is better)
Translates to: YLQMPSHSLINLLCAVTEVSGQR*WLGNRL
Trigger: GAGCCTGTTACCCAGCCAGCATCGCTGCCCAGACAC...TTCAGTCACGGCGCATAACAAATTGATCAGTGAGTGGCTAGGCATCTGCAGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR CCA 90 bp TTAAATTCTGGGAGGTCCAGGCAACATCAGAGCCACTTCCTGTTCCTGAGAGCAATCATCTGCAACAGGTaGGGCCCAGGACAACCCACA +
Preference number: 4 (lower is better)
Translates to: LNSGRSRQHQSHFLFLRAIICNR*GPGQPT
Trigger: TGTGGGTTGTCCTGGGCCCCACCTGTTGCAGATGAT...TGCTCTCAGGAACAGGAAGTGGCTCTGATGTTGCCTGGACCTCCCAGAATTTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR CCA 90 bp GCCATGCCATCTACATGGTTACAACAGCCAGTGGTATCTAAACTGGGGGCAGCAGTGATGGAGCAGACGTaGCTGTCCACATCAAACACC +
Preference number: 4 (lower is better)
Translates to: AMPSTWLQQPVVSKLGAAVMEQT*LSTSNT
Trigger: GGTGTTTGATGTGGACAGCCACGTCTGCTCCATCAC...TGCTGCCCCCAGTTTAGATACCACTGGCTGTTGTAACCATGTAGATGGCATGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406895.3
CDS-3UTR CCA 90 bp TTCAAGATAATTGTGATTTCATCGCACCCCAGATACTTCCAAGTGGAGCCAGGCTCTGGGCAGCGATGCTaGCTGGGTAACAGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: FKIIVISSHPRYFQVEPGSGQRC*LGNRLS
Trigger: GCTGAGCCTGTTACCCAGCCAGCATCGCTGCCCAGA...GCCTGGCTCCACTTGGAAGTATCTGGGGTGCGATGAAATCACAATTATCTTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR CCA 90 bp AAGAGGGTTTGGTTTAAATTCTGGGAGGTCCAGGCAACATCAGAGCCACTTCCTAAGCCAGTGGGTCTCTaGTCCTCCTTGGAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: KRVWFKFWEVQATSEPLPKPVGL*SSLELC
Trigger: GCAGAGCTCCAAGGAGGACCAGAGACCCACTGGCTT...AGGAAGTGGCTCTGATGTTGCCTGGACCTCCCAGAATTTAAACCAAACCCTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR CCA 90 bp AATTCTGGGAGGTCCAGGCAACATCAGAGCCACTTCCTGTTCCTGAGAGCAGAACGGCACAACCTCAAGTaGAACCCAGAGGGGACAAAT +
Preference number: 4 (lower is better)
Translates to: NSGRSRQHQSHFLFLRAERHNLK*NPEGTN
Trigger: ATTTGTCCCCTCTGGGTTCCACTTGAGGTTGTGCCG...TTCTGCTCTCAGGAACAGGAAGTGGCTCTGATGTTGCCTGGACCTCCCAGAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR TCA 90 bp GCTGATTACAGACATTGCCTGTGCTTCCTACCCCAGCAGCTGTCTAGTGCACTTATCGGATGCACTGCTTaGTGCAACGCATTCAGTCCA +
Preference number: 4 (lower is better)
Translates to: ADYRHCLCFLPQQLSSALIGCTA*CNAFSP
Trigger: TGGACTGAATGCGTTGCATCAAGCAGTGCATCCGAT...AAGTGCACTAGACAGCTGCTGGGGTAGGAAGCACAGGCAATGTCTGTAATCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR TCA 90 bp AGCAGCATCGGCACAACCTCAAGTGGAACCCAGAGGGGACAAATTCCCTTGAAATCAGTTAGGACAACTTaGTTCCCATCGGTCCAGGCA +
Preference number: 4 (lower is better)
Translates to: SSIGTTSSGTQRGQIPLKSVRTT*FPSVQA
Trigger: TGCCTGGACCGATGGGAATCAAGTTGTCCTAACTGA...TTTCAAGGGAATTTGTCCCCTCTGGGTTCCACTTGAGGTTGTGCCGATGCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR TCA 90 bp AAGAGGGTTTGGTTTAAATTCTGGGAGGTCCAGGCAACATCAGAGCCACTTCCTGTCTCTGAAGACATCTaGCCTGGACAGGCTGCCATC +
Preference number: 4 (lower is better)
Translates to: KRVWFKFWEVQATSEPLPVSEDI*PGQAAI
Trigger: GATGGCAGCCTGTCCAGGTCAGATGTCTTCAGAGAC...AGGAAGTGGCTCTGATGTTGCCTGGACCTCCCAGAATTTAAACCAAACCCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR TCA 90 bp GGGACACTCATGAGTGGCCACAGCACAAAATCCTGCAGTAGGACTTACCTGGGCTCCTCAACCTCCTCTTaGAGCCAAGAAAAAGACCTA +
Preference number: 4 (lower is better)
Translates to: GTLMSGHSTKSCSRTYLGSSTSS*SQEKDL
Trigger: TAGGTCTTTTTCTTGGCTTCAAGAGGAGGTTGAGGA...GCCCAGGTAAGTCCTACTGCAGGATTTTGTGCTGTGGCCACTCATGAGTGTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR TCA 90 bp AGCAGCATCGGCACAACCTCAAGTGGAACCCAGAGGGGACAAATTCCCTTGAAATGCCTAGCCACTCACTaGTCAATTTGTTATGCGCCG +
Preference number: 4 (lower is better)
Translates to: SSIGTTSSGTQRGQIPLKCLATH*SICYAP
Trigger: CGGCGCATAACAAATTGATCAGTGAGTGGCTAGGCA...TTTCAAGGGAATTTGTCCCCTCTGGGTTCCACTTGAGGTTGTGCCGATGCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR TCA 90 bp TGGCAAGCGCTTCGCCTGAGTGCAGTGGGAGTCTCATTGGCGAGTGTCCAGTGTTGGAGCTTCTATGGCTaGAACAATTTATCTGCAGAT +
Preference number: 4 (lower is better)
Translates to: WQALRLSAVGVSLASVQCWSFYG*NNLSAD
Trigger: ATCTGCAGATAAATTGTTTCAGCCATAGAAGCTCCA...ACACTGGACACTCGCCAATGAGACTCCCACTGCACTCAGGCGAAGCGCTTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR GCA 90 bp CAGTGTGGTAGCAGCATCGGCACAACCTCAAGTGGAACCCAGAGGGGACAAATTCTGGGTGTTGATGTCTaGCTTTACCTGGGAATCATC +
Preference number: 4 (lower is better)
Translates to: QCGSSIGTTSSGTQRGQILGVDV*LYLGII
Trigger: GATGATTCCCAGGTAAAGGCAGACATCAACACCCAG...AATTTGTCCCCTCTGGGTTCCACTTGAGGTTGTGCCGATGCTGCTACCACACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR GCA 90 bp TGCTTCCTACCCCAGCAGCTGTCTAGTGCACTTGAACCACAAAATGGGCCCTCACTGGGTGTTGATGTCTaGCTTTACCTGGGAATCATC +
Preference number: 4 (lower is better)
Translates to: CFLPQQLSSALEPQNGPSLGVDV*LYLGII
Trigger: GATGATTCCCAGGTAAAGGCAGACATCAACACCCAG...TGAGGGCCCATTTTGTGGTTCAAGTGCACTAGACAGCTGCTGGGGTAGGAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR CCA 90 bp GAGTCTCATTGGCGAGTGTCCAGTGTCAAGCAGGCCTTGTTTGTAATGGTCTCAGTGATGGAGCAGACGTaGCTGTCCACATCAAACACC +
Preference number: 4 (lower is better)
Translates to: ESHWRVSSVKQALFVMVSVMEQT*LSTSNT
Trigger: GGTGTTTGATGTGGACAGCCACGTCTGCTCCATCAC...TGAGACCATTACAAACAAGGCCTGCTTGACACTGGACACTCGCCAATGAGACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR CCA 90 bp TTCAAGATAATTGTGATTTCATCGCACCCCAGATACTTCCAAGTGGAGCCAGGCTGTGCTGGTGTGGTCTaGTGTGCTGCTGTGTCTGGG +
Preference number: 4 (lower is better)
Translates to: FKIIVISSHPRYFQVEPGCAGVV*CAAVSG
Trigger: CCCAGACACAGCAGCACACCAGACCACACCAGCACA...GCCTGGCTCCACTTGGAAGTATCTGGGGTGCGATGAAATCACAATTATCTTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR CCA 90 bp GAGTACCTGGACCTTCGTCAGCCAGAATTTGTTAAGGAAGCAAGAGGGTTTGGTTCCAGTGTGCTGGTGTaGTCTGGTGTGCTGCTGTGT +
Preference number: 4 (lower is better)
Translates to: EYLDLRQPEFVKEARGFGSSVLV*SGVLLC
Trigger: ACACAGCAGCACACCAGACCACACCAGCACACTGGA...ACCAAACCCTCTTGCTTCCTTAACAAATTCTGGCTGACGAAGGTCCAGGTACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR CCA 90 bp CAGTGTGGTAGCAGCATCGGCACAACCTCAAGTGGAACCCAGAGGGGACAAATTGCCATGCCATCTACATaGTTACAACAGCCAGTGGTA +
Preference number: 4 (lower is better)
Translates to: QCGSSIGTTSSGTQRGQIAMPST*LQQPVV
Trigger: TACCACTGGCTGTTGTAACCATGTAGATGGCATGGC...AATTTGTCCCCTCTGGGTTCCACTTGAGGTTGTGCCGATGCTGCTACCACACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR CCA 90 bp CAGTGTGGTAGCAGCATCGGCACAACCTCAAGTGGAACCCAGAGGGGACAAATTGCTTCAATGCAGCTTTaGACAAGGGACACAAAGCCT +
Preference number: 4 (lower is better)
Translates to: QCGSSIGTTSSGTQRGQIASMQL*TRDTKP
Trigger: AGGCTTTGTGTCCCTTGTCCAAAGCTGCATTGAAGC...AATTTGTCCCCTCTGGGTTCCACTTGAGGTTGTGCCGATGCTGCTACCACACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR CCA 90 bp TTAAATTCTGGGAGGTCCAGGCAACATCAGAGCCACTTCCTGTTCCTGAGAGCACGGCACAACCTCAAGTaGAACCCAGAGGGGACAAAT +
Preference number: 4 (lower is better)
Translates to: LNSGRSRQHQSHFLFLRARHNLK*NPEGTN
Trigger: ATTTGTCCCCTCTGGGTTCCACTTGAGGTTGTGCCG...TGCTCTCAGGAACAGGAAGTGGCTCTGATGTTGCCTGGACCTCCCAGAATTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR TCA 90 bp TGCTTCCTACCCCAGCAGCTGTCTAGTGCACTTGAACCACAAAATGGGCCCTCATCTGCTGAACTGTACTaGGCCTTAGTTTACCATCAC +
Preference number: 4 (lower is better)
Translates to: CFLPQQLSSALEPQNGPSSAELY*ALVYHH
Trigger: GTGATGGTAAACTAAGGCTCAGTACAGTTCAGCAGA...TGAGGGCCCATTTTGTGGTTCAAGTGCACTAGACAGCTGCTGGGGTAGGAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295148.9
CDS-3UTR TCA 90 bp AATTCTGGGAGGTCCAGGCAACATCAGAGCCACTTCCTGTTCCTGAGAGCAGAAGGCTGCCATCTCTTATaGTTATTTCCTGTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: NSGRSRQHQSHFLFLRAEGCHLL*LFPVWL
Trigger: CAGCCACACAGGAAATAATCATAAGAGATGGCAGCC...TTCTGCTCTCAGGAACAGGAAGTGGCTCTGATGTTGCCTGGACCTCCCAGAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR TCA 90 bp GCCATGCCATCTACATGGTTACAACAGCCAGTGGTATCTAAACTGGGGGCAGCACCATCTAATAAAGACTaGGCTCTGCTACACAGCAGC +
Preference number: 4 (lower is better)
Translates to: AMPSTWLQQPVVSKLGAAPSNKD*ALLHSS
Trigger: GCTGCTGTGTAGCAGAGCTCAGTCTTTATTAGATGG...TGCTGCCCCCAGTTTAGATACCACTGGCTGTTGTAACCATGTAGATGGCATGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406895.3
CDS-3UTR TCA 90 bp GAGTACCTGGACCTTCGTCAGCCAGAATTTGTTAAGGAAGCAAGAGGGTTTGGTCTGCTCTCCCACAGCTaGTTACAGACATTGCCTGTG +
Preference number: 4 (lower is better)
Translates to: EYLDLRQPEFVKEARGFGLLSHS*LQTLPV
Trigger: CACAGGCAATGTCTGTAATCAGCTGTGGGAGAGCAG...ACCAAACCCTCTTGCTTCCTTAACAAATTCTGGCTGACGAAGGTCCAGGTACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR GCA 90 bp ATAATTGTGATTTCATCGCACCCCAGATACTTCCAAGTGGAGCCAGGCCTCAGAATAGCACATTTTGGGTaGCACACACAGCCCTGGGGA +
Preference number: 4 (lower is better)
Translates to: IIVISSHPRYFQVEPGLRIAHFG*HTQPWG
Trigger: TCCCCAGGGCTGTGTGTGGCACCCAAAATGTGCTAT...TCTGAGGCCTGGCTCCACTTGGAAGTATCTGGGGTGCGATGAAATCACAATTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR GCA 90 bp TTCAAGATAATTGTGATTTCATCGCACCCCAGATACTTCCAAGTGGAGCCAGGCATCCTGGGTCCAACATaGACAGTGAATGCGGCCCTG +
Preference number: 4 (lower is better)
Translates to: FKIIVISSHPRYFQVEPGILGPT*TVNAAL
Trigger: CAGGGCCGCATTCACTGTGCATGTTGGACCCAGGAT...GCCTGGCTCCACTTGGAAGTATCTGGGGTGCGATGAAATCACAATTATCTTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR GCA 90 bp TATCTGCAGATGCCTAGCCACTCACTGATCAATTTGTTATGCGCCGTGACTGAAATCCTGGGTCCAACATaGACAGTGAATGCGGCCCTG +
Preference number: 4 (lower is better)
Translates to: YLQMPSHSLINLLCAVTEILGPT*TVNAAL
Trigger: CAGGGCCGCATTCACTGTGCATGTTGGACCCAGGAT...TTCAGTCACGGCGCATAACAAATTGATCAGTGAGTGGCTAGGCATCTGCAGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR GCA 90 bp GTCACTGCTCTCCCACAGCTGATTACAGACATTGCCTGTGCTTCCTACCCCAGCTCTCGTCATGGTAACTaGCTTCTTAAAGGTCACAAG +
Preference number: 4 (lower is better)
Translates to: VTALPQLITDIACASYPSSRHGN*LLKGHK
Trigger: CTTGTGACCTTTAAGAAGGCAGTTACCATGACGAGA...GCTGGGGTAGGAAGCACAGGCAATGTCTGTAATCAGCTGTGGGAGAGCAGTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR GCA 90 bp GAGTCTCATTGGCGAGTGTCCAGTGTCAAGCAGGCCTTGTTTGTAATGGTCTCAAGTGTTGGAAGCCACTaGCACTACGTGGGCTTTAAG +
Preference number: 4 (lower is better)
Translates to: ESHWRVSSVKQALFVMVSSVGSH*HYVGFK
Trigger: CTTAAAGCCCACGTAGTGGCAGTGGCTTCCAACACT...TGAGACCATTACAAACAAGGCCTGCTTGACACTGGACACTCGCCAATGAGACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR GCA 90 bp TGGCAAGCGCTTCGCCTGAGTGCAGTGGGAGTCTCATTGGCGAGTGTCCAGTGTTTCTCTAATCGAATTTaGTGGATGTTTGGGACTGAA +
Preference number: 4 (lower is better)
Translates to: WQALRLSAVGVSLASVQCFSNRI*WMFGTE
Trigger: TTCAGTCCCAAACATCCAGCAAATTCGATTAGAGAA...ACACTGGACACTCGCCAATGAGACTCCCACTGCACTCAGGCGAAGCGCTTGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR GCA 90 bp GCAGAAGCCAGTGGGTCTCTGGTCCTCCTTGGAGCTCTGCTAATTCTTGCTGGTTCAGAAAGACACCGTTaGATTTCAACCAGGTTCCTA +
Preference number: 4 (lower is better)
Translates to: AEASGSLVLLGALLILAGSERHR*ISTRFL
Trigger: TAGGAACCTGGTTGAAATGCAACGGTGTCTTTCTGA...ACCAGCAAGAATTAGCAGAGCTCCAAGGAGGACCAGAGACCCACTGGCTTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR GCA 90 bp GAGTCTCATTGGCGAGTGTCCAGTGTCAAGCAGGCCTTGTTTGTAATGGTCTCAGCTGATTACAGACATTaGCTGTGCTTCCTACCCCAG +
Preference number: 4 (lower is better)
Translates to: ESHWRVSSVKQALFVMVSADYRH*LCFLPQ
Trigger: CTGGGGTAGGAAGCACAGGCAATGTCTGTAATCAGC...TGAGACCATTACAAACAAGGCCTGCTTGACACTGGACACTCGCCAATGAGACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR GCA 90 bp AGCAGCATCGGCACAACCTCAAGTGGAACCCAGAGGGGACAAATTCCCTTGAAAACTGTTCTCAGTCACTaGTCTCCCACAGCTGATTAC +
Preference number: 4 (lower is better)
Translates to: SSIGTTSSGTQRGQIPLKTVLSH*SPTADY
Trigger: GTAATCAGCTGTGGGAGAGCAGTGACTGAGAACAGT...TTTCAAGGGAATTTGTCCCCTCTGGGTTCCACTTGAGGTTGTGCCGATGCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR CCA 90 bp AATTCTGGGAGGTCCAGGCAACATCAGAGCCACTTCCTGTTCCTGAGAGCAGAAACATGCTTCTCATGCTaGACAGCGAGTAGAACAGGT +
Preference number: 4 (lower is better)
Translates to: NSGRSRQHQSHFLFLRAETCFSC*TASRTG
Trigger: ACCTGTTCTACTCGCTGTCCAGCATGAGAAGCATGT...TTCTGCTCTCAGGAACAGGAAGTGGCTCTGATGTTGCCTGGACCTCCCAGAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR CCA 90 bp CGAGTGTCCAGTGTCAAGCAGGCCTTGTTTGTAATGGTCTCATCTGAAGAGCTATGCCACACACAGCCCTaGGGAAGGATAGGTAGTGAT +
Preference number: 4 (lower is better)
Translates to: RVSSVKQALFVMVSSEELCHTQP*GRIGSD
Trigger: ATCACTACCTATCCTTCCCCAGGGCTGTGTGTGGCA...TAGCTCTTCAGATGAGACCATTACAAACAAGGCCTGCTTGACACTGGACACTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR CCA 90 bp AAACACCACTTTCGGAGCCATCTAATAAAGACTGAGCTCTGCTACACAGCAGCGTGCCACACACAGCCCTaGGGAAGGATAGGTAGTGAT +
Preference number: 4 (lower is better)
Translates to: KHHFRSHLIKTELCYTAACHTQP*GRIGSD
Trigger: ATCACTACCTATCCTTCCCCAGGGCTGTGTGTGGCA...CGCTGCTGTGTAGCAGAGCTCAGTCTTTATTAGATGGCTCCGAAAGTGGTGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR CCA 90 bp TTAAATTCTGGGAGGTCCAGGCAACATCAGAGCCACTTCCTGTTCCTGAGAGCACAGAATAGCACATTTTaGGTGCCACACACAGCCCTG +
Preference number: 4 (lower is better)
Translates to: LNSGRSRQHQSHFLFLRAQNSTF*VPHTAL
Trigger: CAGGGCTGTGTGTGGCACCCAAAATGTGCTATTCTG...TGCTCTCAGGAACAGGAAGTGGCTCTGATGTTGCCTGGACCTCCCAGAATTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR CCA 90 bp GTCACTGCTCTCCCACAGCTGATTACAGACATTGCCTGTGCTTCCTACCCCAGCAGGAACCAGAATGCCTaGAATAGTGACTTTTCTCGT +
Preference number: 4 (lower is better)
Translates to: VTALPQLITDIACASYPSRNQNA*NSDFSR
Trigger: ACGAGAAAAGTCACTATTCCAGGCATTCTGGTTCCT...GCTGGGGTAGGAAGCACAGGCAATGTCTGTAATCAGCTGTGGGAGAGCAGTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR CCA 90 bp AATTCTGGGAGGTCCAGGCAACATCAGAGCCACTTCCTGTTCCTGAGAGCAGAAGCCATGCCATCTACATaGTTACAACAGCCAGTGGTA +
Preference number: 4 (lower is better)
Translates to: NSGRSRQHQSHFLFLRAEAMPST*LQQPVV
Trigger: TACCACTGGCTGTTGTAACCATGTAGATGGCATGGC...TTCTGCTCTCAGGAACAGGAAGTGGCTCTGATGTTGCCTGGACCTCCCAGAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR CCA 90 bp GTCAAGCAGGCCTTGTTTGTAATGGTCTCATCTGAAGAGCTACACAGCAAGGACCAGTGGGAGTCTCATTaGCGAGTGTCCAGTGTCAAG +
Preference number: 4 (lower is better)
Translates to: VKQALFVMVSSEELHSKDQWESH*RVSSVK
Trigger: CTTGACACTGGACACTCGCCAATGAGACTCCCACTG...GTCCTTGCTGTGTAGCTCTTCAGATGAGACCATTACAAACAAGGCCTGCTTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR CCA 90 bp GTAACAGACAGACAGGAGTCCCCAAGGGCACAAAATAGTTTCTTTCCAGATGATGAGAGCAGAAGCCAGTaGGTCTCTGGTCCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: VTDRQESPRAQNSFFPDDESRSQ*VSGPPW
Trigger: CCAAGGAGGACCAGAGACCCACTGGCTTCTGCTCTC...ATCATCTGGAAAGAAACTATTTTGTGCCCTTGGGGACTCCTGTCTGTCTGTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR CCA 90 bp AGCAGCATCGGCACAACCTCAAGTGGAACCCAGAGGGGACAAATTCCCTTGAAAGAAGGCAGTGAGAAGTaGTGTTACCATCTGAAGTGG +
Preference number: 4 (lower is better)
Translates to: SSIGTTSSGTQRGQIPLKEGSEK*CYHLKW
Trigger: CCACTTCAGATGGTAACACCACTTCTCACTGCCTTC...TTTCAAGGGAATTTGTCCCCTCTGGGTTCCACTTGAGGTTGTGCCGATGCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
3UTR CAA 72 bp GAGTCTCATTGGCGAGTGTCCAGTGTCAAGCAGGCCTaGTTTGTAATGGTCTCATCTGAAGAGCTACACAGC +
Preference number: 4 (lower is better)
Translates to: ESHWRVSSVKQA*FVMVSSEELHS
Trigger: GCTGTGTAGCTCTTCAGATGAGACCATTACAAACAAGGCCTGCTTGACACTGGACACTCGCCAATGAGACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR TCA 90 bp CGAGTGTCCAGTGTCAAGCAGGCCTTGTTTGTAATGGTCTCATCTGAAGAGCTAATCGGATGCACTGCTTaGTGCAACGCATTCAGTCCA +
Preference number: 4 (lower is better)
Translates to: RVSSVKQALFVMVSSEELIGCTA*CNAFSP
Trigger: TGGACTGAATGCGTTGCATCAAGCAGTGCATCCGAT...TAGCTCTTCAGATGAGACCATTACAAACAAGGCCTGCTTGACACTGGACACTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR TCA 90 bp TTTAGGCTTCAAGATAATTGTGATTTCATCGCACCCCAGATACTTCCAAGTGGATGCGGCCCTGGGTGTTaGTGTCTGCCTTTACCTGGG +
Preference number: 4 (lower is better)
Translates to: FRLQDNCDFIAPQILPSGCGPGC*CLPLPG
Trigger: CCCAGGTAAAGGCAGACATCAACACCCAGGGCCGCA...TCCACTTGGAAGTATCTGGGGTGCGATGAAATCACAATTATCTTGAAGCCTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR TCA 90 bp AATTCTGGGAGGTCCAGGCAACATCAGAGCCACTTCCTGTTCCTGAGAGCAGAAGAGAAAAAGAGTCTCTaGAGACATCTGACCTGGACA +
Preference number: 4 (lower is better)
Translates to: NSGRSRQHQSHFLFLRAEEKKSL*RHLTWT
Trigger: TGTCCAGGTCAGATGTCTTCAGAGACTCTTTTTCTC...TTCTGCTCTCAGGAACAGGAAGTGGCTCTGATGTTGCCTGGACCTCCCAGAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR TCA 90 bp ATAATTGTGATTTCATCGCACCCCAGATACTTCCAAGTGGAGCCAGGCCTCAGAAGTGGTGTTACCATCTaGAGTGGGTCAGGGCTCTTA +
Preference number: 4 (lower is better)
Translates to: IIVISSHPRYFQVEPGLRSGVTI*SGSGLL
Trigger: TAAGAGCCCTGACCCACTTCAGATGGTAACACCACT...TCTGAGGCCTGGCTCCACTTGGAAGTATCTGGGGTGCGATGAAATCACAATTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR TCA 90 bp TTCAAGATAATTGTGATTTCATCGCACCCCAGATACTTCCAAGTGGAGCCAGGCCTGCTCTCCCACAGCTaGTTACAGACATTGCCTGTG +
Preference number: 4 (lower is better)
Translates to: FKIIVISSHPRYFQVEPGLLSHS*LQTLPV
Trigger: CACAGGCAATGTCTGTAATCAGCTGTGGGAGAGCAG...GCCTGGCTCCACTTGGAAGTATCTGGGGTGCGATGAAATCACAATTATCTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR GCA 90 bp ATCGGCACAACCTCAAGTGGAACCCAGAGGGGACAAATTCCCTTGAAATTTCATTGCCACACAGTGACATaGTTCTCATGCTGGACAGCG +
Preference number: 4 (lower is better)
Translates to: IGTTSSGTQRGQIPLKFHCHTVT*FSCWTA
Trigger: CGCTGTCCAGCATGAGAAGCATGTCACTGTGTGGCA...ATGAAATTTCAAGGGAATTTGTCCCCTCTGGGTTCCACTTGAGGTTGTGCCGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR GCA 90 bp CGAGTGTCCAGTGTCAAGCAGGCCTTGTTTGTAATGGTCTCATCTGAAGAGCTAAGTGTTGGAAGCCACTaGCACTACGTGGGCTTTAAG +
Preference number: 4 (lower is better)
Translates to: RVSSVKQALFVMVSSEELSVGSH*HYVGFK
Trigger: CTTAAAGCCCACGTAGTGGCAGTGGCTTCCAACACT...TAGCTCTTCAGATGAGACCATTACAAACAAGGCCTGCTTGACACTGGACACTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR GCA 90 bp TTTAGGCTTCAAGATAATTGTGATTTCATCGCACCCCAGATACTTCCAAGTGGAGAGGAGGCTCCAGTGTaGTGGTGTGGTCTGGTGTGC +
Preference number: 4 (lower is better)
Translates to: FRLQDNCDFIAPQILPSGEEAPV*WCGLVC
Trigger: GCACACCAGACCACACCAGCACACTGGAGCCTCCTC...TCCACTTGGAAGTATCTGGGGTGCGATGAAATCACAATTATCTTGAAGCCTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR GCA 90 bp GAGTCTCATTGGCGAGTGTCCAGTGTCAAGCAGGCCTTGTTTGTAATGGTCTCAACACAGCAAGGACACTaGAGATATCAAGCCATGCCA +
Preference number: 4 (lower is better)
Translates to: ESHWRVSSVKQALFVMVSTQQGH*RYQAMP
Trigger: TGGCATGGCTTGATATCTGCAGTGTCCTTGCTGTGT...TGAGACCATTACAAACAAGGCCTGCTTGACACTGGACACTCGCCAATGAGACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR GCA 90 bp AAGAGGGTTTGGTTTAAATTCTGGGAGGTCCAGGCAACATCAGAGCCACTTCCTATAAAGACTGAGCTCTaGTACACAGCAGCGAGCCTC +
Preference number: 4 (lower is better)
Translates to: KRVWFKFWEVQATSEPLPIKTEL*YTAASL
Trigger: GAGGCTCGCTGCTGTGTAGCAGAGCTCAGTCTTTAT...AGGAAGTGGCTCTGATGTTGCCTGGACCTCCCAGAATTTAAACCAAACCCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR GCA 90 bp AAATTCTGGGAGGTCCAGGCAACATCAGAGCCACTTCCTGTTCCTGAGAGCAGACTAAGACAGCTTCAATaGAGCTTTGGACAAGGGACA +
Preference number: 4 (lower is better)
Translates to: KFWEVQATSEPLPVPESRLRQLQ*SFGQGT
Trigger: TGTCCCTTGTCCAAAGCTGCATTGAAGCTGTCTTAG...TCTGCTCTCAGGAACAGGAAGTGGCTCTGATGTTGCCTGGACCTCCCAGAATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR GCA 90 bp ATAATTGTGATTTCATCGCACCCCAGATACTTCCAAGTGGAGCCAGGCCTCAGACACAGCACAAAATCCTaGAGTAGGACTTACCTGGGC +
Preference number: 4 (lower is better)
Translates to: IIVISSHPRYFQVEPGLRHSTKS*SRTYLG
Trigger: GCCCAGGTAAGTCCTACTGCAGGATTTTGTGCTGTG...TCTGAGGCCTGGCTCCACTTGGAAGTATCTGGGGTGCGATGAAATCACAATTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR GCA 90 bp CGAGTGTCCAGTGTCAAGCAGGCCTTGTTTGTAATGGTCTCATCTGAAGAGCTACACAGCACAAAATCCTaGAGTAGGACTTACCTGGGC +
Preference number: 4 (lower is better)
Translates to: RVSSVKQALFVMVSSEELHSTKS*SRTYLG
Trigger: GCCCAGGTAAGTCCTACTGCAGGATTTTGTGCTGTG...TAGCTCTTCAGATGAGACCATTACAAACAAGGCCTGCTTGACACTGGACACTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR GCA 90 bp GCAGAAGCCAGTGGGTCTCTGGTCCTCCTTGGAGCTCTGCTAATTCTTGCTGGTCTGATCAATTTGTTATaGGCCGTGACTGAAATCTGT +
Preference number: 4 (lower is better)
Translates to: AEASGSLVLLGALLILAGLINLL*AVTEIC
Trigger: ACAGATTTCAGTCACGGCGCATAACAAATTGATCAG...ACCAGCAAGAATTAGCAGAGCTCCAAGGAGGACCAGAGACCCACTGGCTTCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR CCA 90 bp CGAGTGTCCAGTGTCAAGCAGGCCTTGTTTGTAATGGTCTCATCTGAAGAGCTACAGAATAGCACATTTTaGGTGCCACACACAGCCCTG +
Preference number: 4 (lower is better)
Translates to: RVSSVKQALFVMVSSEELQNSTF*VPHTAL
Trigger: CAGGGCTGTGTGTGGCACCCAAAATGTGCTATTCTG...TAGCTCTTCAGATGAGACCATTACAAACAAGGCCTGCTTGACACTGGACACTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR CCA 90 bp AGCAGCATCGGCACAACCTCAAGTGGAACCCAGAGGGGACAAATTCCCTTGAAAGCCACTGCCACTACGTaGGCTTTAAGATTAAATGCT +
Preference number: 4 (lower is better)
Translates to: SSIGTTSSGTQRGQIPLKATATT*ALRLNA
Trigger: AGCATTTAATCTTAAAGCCCACGTAGTGGCAGTGGC...TTTCAAGGGAATTTGTCCCCTCTGGGTTCCACTTGAGGTTGTGCCGATGCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR CCA 90 bp GTCACTGCTCTCCCACAGCTGATTACAGACATTGCCTGTGCTTCCTACCCCAGCTTATATTACAAGTGTTaGAAGCCACTGCCACTACGT +
Preference number: 4 (lower is better)
Translates to: VTALPQLITDIACASYPSLYYKC*KPLPLR
Trigger: ACGTAGTGGCAGTGGCTTCCAACACTTGTAATATAA...GCTGGGGTAGGAAGCACAGGCAATGTCTGTAATCAGCTGTGGGAGAGCAGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR CCA 90 bp TATCTGCAGATGCCTAGCCACTCACTGATCAATTTGTTATGCGCCGTGACTGAACAGTGGGAGTCTCATTaGCGAGTGTCCAGTGTCAAG +
Preference number: 4 (lower is better)
Translates to: YLQMPSHSLINLLCAVTEQWESH*RVSSVK
Trigger: CTTGACACTGGACACTCGCCAATGAGACTCCCACTG...TTCAGTCACGGCGCATAACAAATTGATCAGTGAGTGGCTAGGCATCTGCAGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR CCA 90 bp TTCAAGATAATTGTGATTTCATCGCACCCCAGATACTTCCAAGTGGAGCCAGGCCCAGATACTTCCAAGTaGAGCCAGGCCTCAGACTGT +
Preference number: 4 (lower is better)
Translates to: FKIIVISSHPRYFQVEPGPDTSK*SQASDC
Trigger: ACAGTCTGAGGCCTGGCTCCACTTGGAAGTATCTGG...GCCTGGCTCCACTTGGAAGTATCTGGGGTGCGATGAAATCACAATTATCTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR TCA 90 bp ATCGGCACAACCTCAAGTGGAACCCAGAGGGGACAAATTCCCTTGAAATTTCATTCAGTTAGGACAACTTaGTTCCCATCGGTCCAGGCA +
Preference number: 4 (lower is better)
Translates to: IGTTSSGTQRGQIPLKFHSVRTT*FPSVQA
Trigger: TGCCTGGACCGATGGGAATCAAGTTGTCCTAACTGA...ATGAAATTTCAAGGGAATTTGTCCCCTCTGGGTTCCACTTGAGGTTGTGCCGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR TCA 90 bp TTAAATTCTGGGAGGTCCAGGCAACATCAGAGCCACTTCCTGTTCCTGAGAGCAAAAATGGAGACATCCTaGGCAGTCAACACAGTCAGA +
Preference number: 4 (lower is better)
Translates to: LNSGRSRQHQSHFLFLRAKMETS*AVNTVR
Trigger: TCTGACTGTGTTGACTGCTCAGGATGTCTCCATTTT...TGCTCTCAGGAACAGGAAGTGGCTCTGATGTTGCCTGGACCTCCCAGAATTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR TCA 90 bp GTCAAGCAGGCCTTGTTTGTAATGGTCTCATCTGAAGAGCTACACAGCAAGGACAGCTATAGCAACCTGTaGGTCCACAGTTGCTGTGAT +
Preference number: 4 (lower is better)
Translates to: VKQALFVMVSSEELHSKDSYSNL*VHSCCD
Trigger: ATCACAGCAACTGTGGACTCACAGGTTGCTATAGCT...GTCCTTGCTGTGTAGCTCTTCAGATGAGACCATTACAAACAAGGCCTGCTTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR TCA 90 bp CGAGTGTCCAGTGTCAAGCAGGCCTTGTTTGTAATGGTCTCATCTGAAGAGCTATGTAAGTTCTTTCTTTaGGGCAAACGAGGAGGCTCC +
Preference number: 4 (lower is better)
Translates to: RVSSVKQALFVMVSSEELCKFFL*GKRGGS
Trigger: GGAGCCTCCTCGTTTGCCTCAAAGAAAGAACTTACA...TAGCTCTTCAGATGAGACCATTACAAACAAGGCCTGCTTGACACTGGACACTCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR TCA 90 bp GCTGATTACAGACATTGCCTGTGCTTCCTACCCCAGCAGCTGTCTAGTGCACTTAGAGAGTGGATACACTaGAGAGGATTTCTTCCCATT +
Preference number: 4 (lower is better)
Translates to: ADYRHCLCFLPQQLSSALREWIH*RGFLPI
Trigger: AATGGGAAGAAATCCTCTTCAGTGTATCCACTCTCT...AAGTGCACTAGACAGCTGCTGGGGTAGGAAGCACAGGCAATGTCTGTAATCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR TCA 90 bp AAATTCTGGGAGGTCCAGGCAACATCAGAGCCACTTCCTGTTCCTGAGAGCAGAAGAGAGTGGATACACTaGAGAGGATTTCTTCCCATT +
Preference number: 4 (lower is better)
Translates to: KFWEVQATSEPLPVPESRREWIH*RGFLPI
Trigger: AATGGGAAGAAATCCTCTTCAGTGTATCCACTCTCT...TCTGCTCTCAGGAACAGGAAGTGGCTCTGATGTTGCCTGGACCTCCCAGAATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR TCA 90 bp AAACACCACTTTCGGAGCCATCTAATAAAGACTGAGCTCTGCTACACAGCAGCGACAGCACCTGGACTGTaGGAAAAAGAGTCTCTGAAG +
Preference number: 4 (lower is better)
Translates to: KHHFRSHLIKTELCYTAATAPGL*EKESLK
Trigger: CTTCAGAGACTCTTTTTCTCACAGTCCAGGTGCTGT...CGCTGCTGTGTAGCAGAGCTCAGTCTTTATTAGATGGCTCCGAAAGTGGTGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR TCA 90 bp GCAGAAGCCAGTGGGTCTCTGGTCCTCCTTGGAGCTCTGCTAATTCTTGCTGGTTACCTCAGATTCGGTTaGATTTCTAACTTCCTGAAA +
Preference number: 4 (lower is better)
Translates to: AEASGSLVLLGALLILAGYLRFG*ISNFLK
Trigger: TTTCAGGAAGTTAGAAATTCAACCGAATCTGAGGTA...ACCAGCAAGAATTAGCAGAGCTCCAAGGAGGACCAGAGACCCACTGGCTTCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR GCA 90 bp AATTCTGGGAGGTCCAGGCAACATCAGAGCCACTTCCTGTTCCTGAGAGCAGAATACCTTAGGTCTCACTaGCTCACAAAAACACCAATC +
Preference number: 4 (lower is better)
Translates to: NSGRSRQHQSHFLFLRAEYLRSH*LTKTPI
Trigger: GATTGGTGTTTTTGTGAGGCAGTGAGACCTAAGGTA...TTCTGCTCTCAGGAACAGGAAGTGGCTCTGATGTTGCCTGGACCTCCCAGAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR GCA 90 bp GTCAAGCAGGCCTTGTTTGTAATGGTCTCATCTGAAGAGCTACACAGCAAGGACATGGATCGGATGCACTaGTTGATGCAACGCATTCAG +
Preference number: 4 (lower is better)
Translates to: VKQALFVMVSSEELHSKDMDRMH*LMQRIQ
Trigger: CTGAATGCGTTGCATCAAGCAGTGCATCCGATCCAT...GTCCTTGCTGTGTAGCTCTTCAGATGAGACCATTACAAACAAGGCCTGCTTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR GCA 90 bp CGAGTGTCCAGTGTCAAGCAGGCCTTGTTTGTAATGGTCTCATCTGAAGAGCTAATGGATCGGATGCACTaGTTGATGCAACGCATTCAG +
Preference number: 4 (lower is better)
Translates to: RVSSVKQALFVMVSSEELMDRMH*LMQRIQ
Trigger: CTGAATGCGTTGCATCAAGCAGTGCATCCGATCCAT...TAGCTCTTCAGATGAGACCATTACAAACAAGGCCTGCTTGACACTGGACACTCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR GCA 90 bp CGAGTGTCCAGTGTCAAGCAGGCCTTGTTTGTAATGGTCTCATCTGAAGAGCTAGTGACATGCTTCTCATaGTGGACAGCGAGTAGAACA +
Preference number: 4 (lower is better)
Translates to: RVSSVKQALFVMVSSEELVTCFS*WTASRT
Trigger: TGTTCTACTCGCTGTCCAGCATGAGAAGCATGTCAC...TAGCTCTTCAGATGAGACCATTACAAACAAGGCCTGCTTGACACTGGACACTCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR GCA 90 bp CCTGAGAGCAGAAGCCAGTGGGTCTCTGGTCCTCCTTGGAGCTCTGCTAATTCTGATTTCTTCCCATTATaGAGACGGTTTGTAAGTTCA +
Preference number: 4 (lower is better)
Translates to: PESRSQWVSGPPWSSANSDFFPL*RRFVSS
Trigger: TGAACTTACAAACCGTCTGCATAATGGGAAGAAATC...AGAATTAGCAGAGCTCCAAGGAGGACCAGAGACCCACTGGCTTCTGCTCTCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR GCA 90 bp AGCAGCATCGGCACAACCTCAAGTGGAACCCAGAGGGGACAAATTCCCTTGAAAGCAGATATCAAGCCATaGCATCTACATGGTTACAAC +
Preference number: 4 (lower is better)
Translates to: SSIGTTSSGTQRGQIPLKADIKP*HLHGYN
Trigger: GTTGTAACCATGTAGATGGCATGGCTTGATATCTGC...TTTCAAGGGAATTTGTCCCCTCTGGGTTCCACTTGAGGTTGTGCCGATGCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR GCA 90 bp AAGAGGGTTTGGTTTAAATTCTGGGAGGTCCAGGCAACATCAGAGCCACTTCCTACACAGCAAGGACACTaGAGATATCAAGCCATGCCA +
Preference number: 4 (lower is better)
Translates to: KRVWFKFWEVQATSEPLPTQQGH*RYQAMP
Trigger: TGGCATGGCTTGATATCTGCAGTGTCCTTGCTGTGT...AGGAAGTGGCTCTGATGTTGCCTGGACCTCCCAGAATTTAAACCAAACCCTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR GCA 90 bp TTTAGGCTTCAAGATAATTGTGATTTCATCGCACCCCAGATACTTCCAAGTGGAAGCGCTTCGCCTGAGTaGAGTGGGAGTCTCATTGGC +
Preference number: 4 (lower is better)
Translates to: FRLQDNCDFIAPQILPSGSASPE*SGSLIG
Trigger: GCCAATGAGACTCCCACTGCACTCAGGCGAAGCGCT...TCCACTTGGAAGTATCTGGGGTGCGATGAAATCACAATTATCTTGAAGCCTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR GCA 90 bp GTCAAGCAGGCCTTGTTTGTAATGGTCTCATCTGAAGAGCTACACAGCAAGGACACTGTTCTCAGTCACTaGTCTCCCACAGCTGATTAC +
Preference number: 4 (lower is better)
Translates to: VKQALFVMVSSEELHSKDTVLSH*SPTADY
Trigger: GTAATCAGCTGTGGGAGAGCAGTGACTGAGAACAGT...GTCCTTGCTGTGTAGCTCTTCAGATGAGACCATTACAAACAAGGCCTGCTTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR CCA 90 bp AGGGTTTGGTTTAAATTCTGGGAGGTCCAGGCAACATCAGAGCCACTTCCTGTTACATGCTTCTCATGCTaGACAGCGAGTAGAACAGGT +
Preference number: 4 (lower is better)
Translates to: RVWFKFWEVQATSEPLPVTCFSC*TASRTG
Trigger: ACCTGTTCTACTCGCTGTCCAGCATGAGAAGCATGT...AACAGGAAGTGGCTCTGATGTTGCCTGGACCTCCCAGAATTTAAACCAAACCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR CCA 90 bp TTAAATTCTGGGAGGTCCAGGCAACATCAGAGCCACTTCCTGTTCCTGAGAGCAGCCACTGCCACTACGTaGGCTTTAAGATTAAATGCT +
Preference number: 4 (lower is better)
Translates to: LNSGRSRQHQSHFLFLRAATATT*ALRLNA
Trigger: AGCATTTAATCTTAAAGCCCACGTAGTGGCAGTGGC...TGCTCTCAGGAACAGGAAGTGGCTCTGATGTTGCCTGGACCTCCCAGAATTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR CCA 90 bp TTTAGGCTTCAAGATAATTGTGATTTCATCGCACCCCAGATACTTCCAAGTGGATGTGCTGGTGTGGTCTaGTGTGCTGCTGTGTCTGGG +
Preference number: 4 (lower is better)
Translates to: FRLQDNCDFIAPQILPSGCAGVV*CAAVSG
Trigger: CCCAGACACAGCAGCACACCAGACCACACCAGCACA...TCCACTTGGAAGTATCTGGGGTGCGATGAAATCACAATTATCTTGAAGCCTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR CCA 90 bp GCTGATTACAGACATTGCCTGTGCTTCCTACCCCAGCAGCTGTCTAGTGCACTTGTTTTTAAGAGTACCTaGACCTTCGTCAGCCAGAAT +
Preference number: 4 (lower is better)
Translates to: ADYRHCLCFLPQQLSSALVFKST*TFVSQN
Trigger: ATTCTGGCTGACGAAGGTCCAGGTACTCTTAAAAAC...AAGTGCACTAGACAGCTGCTGGGGTAGGAAGCACAGGCAATGTCTGTAATCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR CCA 90 bp ACAGCTTCAATGCAGCTTTGGACAAGGGACACAAAGCCTCAGAGAAACCATAAACCAGATACTTCCAAGTaGAGCCAGGCCTCAGACTGT +
Preference number: 4 (lower is better)
Translates to: TASMQLWTRDTKPQRNHKPDTSK*SQASDC
Trigger: ACAGTCTGAGGCCTGGCTCCACTTGGAAGTATCTGG...TTTATGGTTTCTCTGAGGCTTTGTGTCCCTTGTCCAAAGCTGCATTGAAGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR TCA 90 bp GTAACAGACAGACAGGAGTCCCCAAGGGCACAAAATAGTTTCTTTCCAGATGATTTGACCTCTCCACTGTaGAGCCGCAAATCAGTTAGG +
Preference number: 4 (lower is better)
Translates to: VTDRQESPRAQNSFFPDDLTSPL*SRKSVR
Trigger: CCTAACTGATTTGCGGCTTCACAGTGGAGAGGTCAA...ATCATCTGGAAAGAAACTATTTTGTGCCCTTGGGGACTCCTGTCTGTCTGTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR TCA 90 bp AAGAGGGTTTGGTTTAAATTCTGGGAGGTCCAGGCAACATCAGAGCCACTTCCTCTAATCTCACAAGTCTaGGACGTCAGCCATTTGCTT +
Preference number: 4 (lower is better)
Translates to: KRVWFKFWEVQATSEPLPLISQV*DVSHLL
Trigger: AAGCAAATGGCTGACGTCTCAGACTTGTGAGATTAG...AGGAAGTGGCTCTGATGTTGCCTGGACCTCCCAGAATTTAAACCAAACCCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR TCA 90 bp AAACACCACTTTCGGAGCCATCTAATAAAGACTGAGCTCTGCTACACAGCAGCGAAAATGGAGACATCCTaGGCAGTCAACACAGTCAGA +
Preference number: 4 (lower is better)
Translates to: KHHFRSHLIKTELCYTAAKMETS*AVNTVR
Trigger: TCTGACTGTGTTGACTGCTCAGGATGTCTCCATTTT...CGCTGCTGTGTAGCAGAGCTCAGTCTTTATTAGATGGCTCCGAAAGTGGTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR TCA 90 bp CCCACATTGATCTTAGTTAACAGTCTTGTAGTTCCCTCTTTAGGCTTCAAGATAGTCCAACATGCACAGTaGATGCGGCCCTGGGTGTTG +
Preference number: 4 (lower is better)
Translates to: PTLILVNSLVVPSLGFKIVQHAQ*MRPWVL
Trigger: CAACACCCAGGGCCGCATTCACTGTGCATGTTGGAC...TATCTTGAAGCCTAAAGAGGGAACTACAAGACTGTTAACTAAGATCAATGTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR TCA 90 bp TTCAAGATAATTGTGATTTCATCGCACCCCAGATACTTCCAAGTGGAGCCAGGCGGCTGCCATCTCTTATaGTTATTTCCTGTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: FKIIVISSHPRYFQVEPGGCHLL*LFPVWL
Trigger: CAGCCACACAGGAAATAATCATAAGAGATGGCAGCC...GCCTGGCTCCACTTGGAAGTATCTGGGGTGCGATGAAATCACAATTATCTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR TCA 90 bp AGTGTCAAGCAGGCCTTGTTTGTAATGGTCTCATCTGAAGAGCTACACAGCAAGTTTCAGGGACACTCATaGGTGGCCACAGCACAAAAT +
Preference number: 4 (lower is better)
Translates to: SVKQALFVMVSSEELHSKFQGHS*VATAQN
Trigger: ATTTTGTGCTGTGGCCACTCATGAGTGTCCCTGAAA...CTTGCTGTGTAGCTCTTCAGATGAGACCATTACAAACAAGGCCTGCTTGACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR TCA 90 bp GTAACAGACAGACAGGAGTCCCCAAGGGCACAAAATAGTTTCTTTCCAGATGATAGTGGTGTTACCATCTaGAGTGGGTCAGGGCTCTTA +
Preference number: 4 (lower is better)
Translates to: VTDRQESPRAQNSFFPDDSGVTI*SGSGLL
Trigger: TAAGAGCCCTGACCCACTTCAGATGGTAACACCACT...ATCATCTGGAAAGAAACTATTTTGTGCCCTTGGGGACTCCTGTCTGTCTGTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR TCA 90 bp GAGTCTCATTGGCGAGTGTCCAGTGTCAAGCAGGCCTTGTTTGTAATGGTCTCAATTTGTTATGCGCCGTaGCTGAAATCTGTGATTCCA +
Preference number: 4 (lower is better)
Translates to: ESHWRVSSVKQALFVMVSICYAP*LKSVIP
Trigger: TGGAATCACAGATTTCAGTCACGGCGCATAACAAAT...TGAGACCATTACAAACAAGGCCTGCTTGACACTGGACACTCGCCAATGAGACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR GCA 90 bp CATAAACACCACTTTCGGAGCCATCTAATAAAGACTGAGCTCTGCTACACAGCATATAAGAATGCAGGCTaGTGCCTACTGCCACCACCA +
Preference number: 4 (lower is better)
Translates to: HKHHFRSHLIKTELCYTAYKNAG*CLLPPP
Trigger: TGGTGGTGGCAGTAGGCAGCAGCCTGCATTCTTATA...TGCTGTGTAGCAGAGCTCAGTCTTTATTAGATGGCTCCGAAAGTGGTGTTTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR CCA 90 bp AATTCTGGGAGGTCCAGGCAACATCAGAGCCACTTCCTGTTCCTGAGAGCAGAATTATATTACAAGTGTTaGAAGCCACTGCCACTACGT +
Preference number: 4 (lower is better)
Translates to: NSGRSRQHQSHFLFLRAELYYKC*KPLPLR
Trigger: ACGTAGTGGCAGTGGCTTCCAACACTTGTAATATAA...TTCTGCTCTCAGGAACAGGAAGTGGCTCTGATGTTGCCTGGACCTCCCAGAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR CCA 90 bp ACAGCTTCAATGCAGCTTTGGACAAGGGACACAAAGCCTCAGAGAAACCATAAAGGTTACAACAGCCAGTaGTATCTAAACTGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: TASMQLWTRDTKPQRNHKGYNSQ*YLNWGQ
Trigger: CTGCCCCCAGTTTAGATACCACTGGCTGTTGTAACC...TTTATGGTTTCTCTGAGGCTTTGTGTCCCTTGTCCAAAGCTGCATTGAAGCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR CCA 90 bp TATCTGCAGATGCCTAGCCACTCACTGATCAATTTGTTATGCGCCGTGACTGAAGAAGGCAGTGAGAAGTaGTGTTACCATCTGAAGTGG +
Preference number: 4 (lower is better)
Translates to: YLQMPSHSLINLLCAVTEEGSEK*CYHLKW
Trigger: CCACTTCAGATGGTAACACCACTTCTCACTGCCTTC...TTCAGTCACGGCGCATAACAAATTGATCAGTGAGTGGCTAGGCATCTGCAGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR TCA 90 bp AAACACCACTTTCGGAGCCATCTAATAAAGACTGAGCTCTGCTACACAGCAGCGATTCAAACTGTCCAATaGCTTTGGAGTCCCCAAACT +
Preference number: 4 (lower is better)
Translates to: KHHFRSHLIKTELCYTAAIQTVQ*LWSPQT
Trigger: AGTTTGGGGACTCCAAAGTCATTGGACAGTTTGAAT...CGCTGCTGTGTAGCAGAGCTCAGTCTTTATTAGATGGCTCCGAAAGTGGTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR TCA 90 bp TATCTGCAGATGCCTAGCCACTCACTGATCAATTTGTTATGCGCCGTGACTGAACTAATCTCACAAGTCTaGGACGTCAGCCATTTGCTT +
Preference number: 4 (lower is better)
Translates to: YLQMPSHSLINLLCAVTELISQV*DVSHLL
Trigger: AAGCAAATGGCTGACGTCTCAGACTTGTGAGATTAG...TTCAGTCACGGCGCATAACAAATTGATCAGTGAGTGGCTAGGCATCTGCAGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR TCA 90 bp GCTGATTACAGACATTGCCTGTGCTTCCTACCCCAGCAGCTGTCTAGTGCACTTTGGGAATCTGGTAAATaGTGTGAACATAAGGAAGAT +
Preference number: 4 (lower is better)
Translates to: ADYRHCLCFLPQQLSSALWESGK*CEHKED
Trigger: ATCTTCCTTATGTTCACATCATTTACCAGATTCCCA...AAGTGCACTAGACAGCTGCTGGGGTAGGAAGCACAGGCAATGTCTGTAATCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406895.3
CDS-3UTR GCA 90 bp GTCAAGCAGGCCTTGTTTGTAATGGTCTCATCTGAAGAGCTACACAGCAAGGACTACCTTAGGTCTCACTaGCTCACAAAAACACCAATC +
Preference number: 4 (lower is better)
Translates to: VKQALFVMVSSEELHSKDYLRSH*LTKTPI
Trigger: GATTGGTGTTTTTGTGAGGCAGTGAGACCTAAGGTA...GTCCTTGCTGTGTAGCTCTTCAGATGAGACCATTACAAACAAGGCCTGCTTGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR GCA 90 bp ATAATATTGTTTTGTTCTGAGAATTCTGCCCTTAGTCAAAACCACACAGTCATGGAGGAGGCTCCAGTGTaGTGGTGTGGTCTGGTGTGC +
Preference number: 4 (lower is better)
Translates to: IILFCSENSALSQNHTVMEEAPV*WCGLVC
Trigger: GCACACCAGACCACACCAGCACACTGGAGCCTCCTC...CATGACTGTGTGGTTTTGACTAAGGGCAGAATTCTCAGAACAAAACAATATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR GCA 90 bp AAACACCACTTTCGGAGCCATCTAATAAAGACTGAGCTCTGCTACACAGCAGCGGCAGATATCAAGCCATaGCATCTACATGGTTACAAC +
Preference number: 4 (lower is better)
Translates to: KHHFRSHLIKTELCYTAAADIKP*HLHGYN
Trigger: GTTGTAACCATGTAGATGGCATGGCTTGATATCTGC...CGCTGCTGTGTAGCAGAGCTCAGTCTTTATTAGATGGCTCCGAAAGTGGTGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR CCA 90 bp AGGGTTTGGTTTAAATTCTGGGAGGTCCAGGCAACATCAGAGCCACTTCCTGTTGTTTTTAAGAGTACCTaGACCTTCGTCAGCCAGAAT +
Preference number: 4 (lower is better)
Translates to: RVWFKFWEVQATSEPLPVVFKST*TFVSQN
Trigger: ATTCTGGCTGACGAAGGTCCAGGTACTCTTAAAAAC...AACAGGAAGTGGCTCTGATGTTGCCTGGACCTCCCAGAATTTAAACCAAACCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR TCA 90 bp ATCGGCACAACCTCAAGTGGAACCCAGAGGGGACAAATTCCCTTGAAATTTCATATTCAAACTGTCCAATaGCTTTGGAGTCCCCAAACT +
Preference number: 4 (lower is better)
Translates to: IGTTSSGTQRGQIPLKFHIQTVQ*LWSPQT
Trigger: AGTTTGGGGACTCCAAAGTCATTGGACAGTTTGAAT...ATGAAATTTCAAGGGAATTTGTCCCCTCTGGGTTCCACTTGAGGTTGTGCCGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR TCA 90 bp GAAACAATTTATCTGCAGATGCCTAGCCACTCACTGATCAATTTGTTATGCGCCCCAGGCCTTCCATTCTaGCTACTGGTATTAACTGTC +
Preference number: 4 (lower is better)
Translates to: ETIYLQMPSHSLINLLCAPGLPF*LLVLTV
Trigger: GACAGTTAATACCAGTAGTCAGAATGGAAGGCCTGG...GGCGCATAACAAATTGATCAGTGAGTGGCTAGGCATCTGCAGATAAATTGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR TCA 90 bp CATAAACACCACTTTCGGAGCCATCTAATAAAGACTGAGCTCTGCTACACAGCAGAGAAAAAGAGTCTCTaGAGACATCTGACCTGGACA +
Preference number: 4 (lower is better)
Translates to: HKHHFRSHLIKTELCYTAEKKSL*RHLTWT
Trigger: TGTCCAGGTCAGATGTCTTCAGAGACTCTTTTTCTC...TGCTGTGTAGCAGAGCTCAGTCTTTATTAGATGGCTCCGAAAGTGGTGTTTATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR TCA 90 bp ACAGCTTCAATGCAGCTTTGGACAAGGGACACAAAGCCTCAGAGAAACCATAAATCCTCAACCTCCTCTTaGAGCCAAGAAAAAGACCTA +
Preference number: 4 (lower is better)
Translates to: TASMQLWTRDTKPQRNHKSSTSS*SQEKDL
Trigger: TAGGTCTTTTTCTTGGCTTCAAGAGGAGGTTGAGGA...TTTATGGTTTCTCTGAGGCTTTGTGTCCCTTGTCCAAAGCTGCATTGAAGCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR TCA 90 bp TTTAGGCTTCAAGATAATTGTGATTTCATCGCACCCCAGATACTTCCAAGTGGAGTCAGGGCTCTTACCTaGCTAAGCTGGTACTTTAGC +
Preference number: 4 (lower is better)
Translates to: FRLQDNCDFIAPQILPSGVRALT*LSWYFS
Trigger: GCTAAAGTACCAGCTTAGTCAGGTAAGAGCCCTGAC...TCCACTTGGAAGTATCTGGGGTGCGATGAAATCACAATTATCTTGAAGCCTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR TCA 90 bp TATCTGCAGATGCCTAGCCACTCACTGATCAATTTGTTATGCGCCGTGACTGAAATTTGTTATGCGCCGTaGCTGAAATCTGTGATTCCA +
Preference number: 4 (lower is better)
Translates to: YLQMPSHSLINLLCAVTEICYAP*LKSVIP
Trigger: TGGAATCACAGATTTCAGTCACGGCGCATAACAAAT...TTCAGTCACGGCGCATAACAAATTGATCAGTGAGTGGCTAGGCATCTGCAGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR GCA 90 bp ATAATATTGTTTTGTTCTGAGAATTCTGCCCTTAGTCAAAACCACACAGTCATGAAGAATGCAGGCTGCTaGCTACTGCCACCACCAGCC +
Preference number: 4 (lower is better)
Translates to: IILFCSENSALSQNHTVMKNAGC*LLPPPA
Trigger: GGCTGGTGGTGGCAGTAGGCAGCAGCCTGCATTCTT...CATGACTGTGTGGTTTTGACTAAGGGCAGAATTCTCAGAACAAAACAATATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR GCA 90 bp GAGTCTCATTGGCGAGTGTCCAGTGTCAAGCAGGCCTTGTTTGTAATGGTCTCAGATTTCTTCCCATTATaGAGACGGTTTGTAAGTTCA +
Preference number: 4 (lower is better)
Translates to: ESHWRVSSVKQALFVMVSDFFPL*RRFVSS
Trigger: TGAACTTACAAACCGTCTGCATAATGGGAAGAAATC...TGAGACCATTACAAACAAGGCCTGCTTGACACTGGACACTCGCCAATGAGACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR GCA 90 bp AAACACCACTTTCGGAGCCATCTAATAAAGACTGAGCTCTGCTACACAGCAGCGCTGATCAATTTGTTATaGGCCGTGACTGAAATCTGT +
Preference number: 4 (lower is better)
Translates to: KHHFRSHLIKTELCYTAALINLL*AVTEIC
Trigger: ACAGATTTCAGTCACGGCGCATAACAAATTGATCAG...CGCTGCTGTGTAGCAGAGCTCAGTCTTTATTAGATGGCTCCGAAAGTGGTGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR GCA 90 bp TATCTGCAGATGCCTAGCCACTCACTGATCAATTTGTTATGCGCCGTGACTGAACTGAAACAATTTATCTaGAGATGCCTAGCCACTCAC +
Preference number: 4 (lower is better)
Translates to: YLQMPSHSLINLLCAVTELKQFI*RCLATH
Trigger: GTGAGTGGCTAGGCATCTGCAGATAAATTGTTTCAG...TTCAGTCACGGCGCATAACAAATTGATCAGTGAGTGGCTAGGCATCTGCAGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR GCA 90 bp ATCGGCACAACCTCAAGTGGAACCCAGAGGGGACAAATTCCCTTGAAATTTCATCTGAAACAATTTATCTaGAGATGCCTAGCCACTCAC +
Preference number: 4 (lower is better)
Translates to: IGTTSSGTQRGQIPLKFHLKQFI*RCLATH
Trigger: GTGAGTGGCTAGGCATCTGCAGATAAATTGTTTCAG...ATGAAATTTCAAGGGAATTTGTCCCCTCTGGGTTCCACTTGAGGTTGTGCCGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR CCA 90 bp AAATTCTGGGAGGTCCAGGCAACATCAGAGCCACTTCCTGTTCCTGAGAGCAGAGTCTTTACTGTTAGGTaGGATATTAAAGGTTTCAGA +
Preference number: 4 (lower is better)
Translates to: KFWEVQATSEPLPVPESRVFTVR*DIKGFR
Trigger: TCTGAAACCTTTAATATCCCACCTAACAGTAAAGAC...TCTGCTCTCAGGAACAGGAAGTGGCTCTGATGTTGCCTGGACCTCCCAGAATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR CCA 90 bp ATCGGCACAACCTCAAGTGGAACCCAGAGGGGACAAATTCCCTTGAAATTTCATAGGAACCAGAATGCCTaGAATAGTGACTTTTCTCGT +
Preference number: 4 (lower is better)
Translates to: IGTTSSGTQRGQIPLKFHRNQNA*NSDFSR
Trigger: ACGAGAAAAGTCACTATTCCAGGCATTCTGGTTCCT...ATGAAATTTCAAGGGAATTTGTCCCCTCTGGGTTCCACTTGAGGTTGTGCCGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR CCA 90 bp CGAGTGTCCAGTGTCAAGCAGGCCTTGTTTGTAATGGTCTCATCTGAAGAGCTAGAGAGAAGAATCCAGTaGGAATCATGTAGCATTTCA +
Preference number: 4 (lower is better)
Translates to: RVSSVKQALFVMVSSEELERRIQ*ESCSIS
Trigger: TGAAATGCTACATGATTCCCACTGGATTCTTCTCTC...TAGCTCTTCAGATGAGACCATTACAAACAAGGCCTGCTTGACACTGGACACTCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295148.9
CDS-3UTR GCA 90 bp GTAACAGACAGACAGGAGTCCCCAAGGGCACAAAATAGTTTCTTTCCAGATGATTCTCGTCATGGTAACTaGCTTCTTAAAGGTCACAAG +
Preference number: 4 (lower is better)
Translates to: VTDRQESPRAQNSFFPDDSRHGN*LLKGHK
Trigger: CTTGTGACCTTTAAGAAGGCAGTTACCATGACGAGA...ATCATCTGGAAAGAAACTATTTTGTGCCCTTGGGGACTCCTGTCTGTCTGTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR GCA 90 bp CCCACATTGATCTTAGTTAACAGTCTTGTAGTTCCCTCTTTAGGCTTCAAGATAATAAAGACTGAGCTCTaGTACACAGCAGCGAGCCTC +
Preference number: 4 (lower is better)
Translates to: PTLILVNSLVVPSLGFKIIKTEL*YTAASL
Trigger: GAGGCTCGCTGCTGTGTAGCAGAGCTCAGTCTTTAT...TATCTTGAAGCCTAAAGAGGGAACTACAAGACTGTTAACTAAGATCAATGTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR CCA 90 bp ATAATTGTGATTTCATCGCACCCCAGATACTTCCAAGTGGAGCCAGGCCTCAGACTAATGGAGCTTCTATaGCTGAAACAATTTATCTGC +
Preference number: 4 (lower is better)
Translates to: IIVISSHPRYFQVEPGLRLMELL*LKQFIC
Trigger: GCAGATAAATTGTTTCAGCCATAGAAGCTCCATTAG...TCTGAGGCCTGGCTCCACTTGGAAGTATCTGGGGTGCGATGAAATCACAATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
3UTR CAA 72 bp ATTTATCTGCAGATGCCTAGCCACTCACTGATCAATTaGTTATGCGCCGTGACTGAAATCTGTGATTCCATC +
Preference number: 4 (lower is better)
Translates to: IYLQMPSHSLIN*LCAVTEICDSI
Trigger: GATGGAATCACAGATTTCAGTCACGGCGCATAACAAATTGATCAGTGAGTGGCTAGGCATCTGCAGATAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR TCA 90 bp CCCACATTGATCTTAGTTAACAGTCTTGTAGTTCCCTCTTTAGGCTTCAAGATACCATCTAATAAAGACTaGGCTCTGCTACACAGCAGC +
Preference number: 4 (lower is better)
Translates to: PTLILVNSLVVPSLGFKIPSNKD*ALLHSS
Trigger: GCTGCTGTGTAGCAGAGCTCAGTCTTTATTAGATGG...TATCTTGAAGCCTAAAGAGGGAACTACAAGACTGTTAACTAAGATCAATGTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR TCA 90 bp CCCACATTGATCTTAGTTAACAGTCTTGTAGTTCCCTCTTTAGGCTTCAAGATATTTCAGGGACACTCATaGGTGGCCACAGCACAAAAT +
Preference number: 4 (lower is better)
Translates to: PTLILVNSLVVPSLGFKIFQGHS*VATAQN
Trigger: ATTTTGTGCTGTGGCCACTCATGAGTGTCCCTGAAA...TATCTTGAAGCCTAAAGAGGGAACTACAAGACTGTTAACTAAGATCAATGTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR TCA 90 bp GTAACAGACAGACAGGAGTCCCCAAGGGCACAAAATAGTTTCTTTCCAGATGATTGGAGCTTCTATGGCTaGAACAATTTATCTGCAGAT +
Preference number: 4 (lower is better)
Translates to: VTDRQESPRAQNSFFPDDWSFYG*NNLSAD
Trigger: ATCTGCAGATAAATTGTTTCAGCCATAGAAGCTCCA...ATCATCTGGAAAGAAACTATTTTGTGCCCTTGGGGACTCCTGTCTGTCTGTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR GCA 90 bp TATCTGCAGATGCCTAGCCACTCACTGATCAATTTGTTATGCGCCGTGACTGAAGGCTTTAAGATTAAATaGTATCAGATCAGGAACCAG +
Preference number: 4 (lower is better)
Translates to: YLQMPSHSLINLLCAVTEGFKIK*YQIRNQ
Trigger: CTGGTTCCTGATCTGATAGCATTTAATCTTAAAGCC...TTCAGTCACGGCGCATAACAAATTGATCAGTGAGTGGCTAGGCATCTGCAGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR CCA 90 bp ACAGCTTCAATGCAGCTTTGGACAAGGGACACAAAGCCTCAGAGAAACCATAAAACAGATCTTATCCAATaGAAGCTCAGTAGCTATAGC +
Preference number: 4 (lower is better)
Translates to: TASMQLWTRDTKPQRNHKTDLIQ*KLSSYS
Trigger: GCTATAGCTACTGAGCTTCCATTGGATAAGATCTGT...TTTATGGTTTCTCTGAGGCTTTGTGTCCCTTGTCCAAAGCTGCATTGAAGCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR CCA 90 bp AGGGTTTGGTTTAAATTCTGGGAGGTCCAGGCAACATCAGAGCCACTTCCTGTTTCTGCTAATTCTTGCTaGTTTGAGGTTAATATGCTA +
Preference number: 4 (lower is better)
Translates to: RVWFKFWEVQATSEPLPVSANSC*FEVNML
Trigger: TAGCATATTAACCTCAAACCAGCAAGAATTAGCAGA...AACAGGAAGTGGCTCTGATGTTGCCTGGACCTCCCAGAATTTAAACCAAACCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR CCA 90 bp TTCAAGATAATTGTGATTTCATCGCACCCCAGATACTTCCAAGTGGAGCCAGGCCTAATGGAGCTTCTATaGCTGAAACAATTTATCTGC +
Preference number: 4 (lower is better)
Translates to: FKIIVISSHPRYFQVEPGLMELL*LKQFIC
Trigger: GCAGATAAATTGTTTCAGCCATAGAAGCTCCATTAG...GCCTGGCTCCACTTGGAAGTATCTGGGGTGCGATGAAATCACAATTATCTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR GCA 90 bp ACAGCTTCAATGCAGCTTTGGACAAGGGACACAAAGCCTCAGAGAAACCATAAAGGCTTTAAGATTAAATaGTATCAGATCAGGAACCAG +
Preference number: 4 (lower is better)
Translates to: TASMQLWTRDTKPQRNHKGFKIK*YQIRNQ
Trigger: CTGGTTCCTGATCTGATAGCATTTAATCTTAAAGCC...TTTATGGTTTCTCTGAGGCTTTGTGTCCCTTGTCCAAAGCTGCATTGAAGCTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR GCA 90 bp TTTAGGCTTCAAGATAATTGTGATTTCATCGCACCCCAGATACTTCCAAGTGGATCAGAAAGACACCGTTaGATTTCAACCAGGTTCCTA +
Preference number: 4 (lower is better)
Translates to: FRLQDNCDFIAPQILPSGSERHR*ISTRFL
Trigger: TAGGAACCTGGTTGAAATGCAACGGTGTCTTTCTGA...TCCACTTGGAAGTATCTGGGGTGCGATGAAATCACAATTATCTTGAAGCCTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR TCA 90 bp ATAATATTGTTTTGTTCTGAGAATTCTGCCCTTAGTCAAAACCACACAGTCATGACAGCACCTGGACTGTaGGAAAAAGAGTCTCTGAAG +
Preference number: 4 (lower is better)
Translates to: IILFCSENSALSQNHTVMTAPGL*EKESLK
Trigger: CTTCAGAGACTCTTTTTCTCACAGTCCAGGTGCTGT...CATGACTGTGTGGTTTTGACTAAGGGCAGAATTCTCAGAACAAAACAATATTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR CCA 90 bp CATAAACACCACTTTCGGAGCCATCTAATAAAGACTGAGCTCTGCTACACAGCAGTCTTTACTGTTAGGTaGGATATTAAAGGTTTCAGA +
Preference number: 4 (lower is better)
Translates to: HKHHFRSHLIKTELCYTAVFTVR*DIKGFR
Trigger: TCTGAAACCTTTAATATCCCACCTAACAGTAAAGAC...TGCTGTGTAGCAGAGCTCAGTCTTTATTAGATGGCTCCGAAAGTGGTGTTTATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR GCA 90 bp TTTAGGCTTCAAGATAATTGTGATTTCATCGCACCCCAGATACTTCCAAGTGGATTCTCTAATCGAATTTaGTGGATGTTTGGGACTGAA +
Preference number: 4 (lower is better)
Translates to: FRLQDNCDFIAPQILPSGFSNRI*WMFGTE
Trigger: TTCAGTCCCAAACATCCAGCAAATTCGATTAGAGAA...TCCACTTGGAAGTATCTGGGGTGCGATGAAATCACAATTATCTTGAAGCCTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR CCA 90 bp CCCACATTGATCTTAGTTAACAGTCTTGTAGTTCCCTCTTTAGGCTTCAAGATAACAGATCTTATCCAATaGAAGCTCAGTAGCTATAGC +
Preference number: 4 (lower is better)
Translates to: PTLILVNSLVVPSLGFKITDLIQ*KLSSYS
Trigger: GCTATAGCTACTGAGCTTCCATTGGATAAGATCTGT...TATCTTGAAGCCTAAAGAGGGAACTACAAGACTGTTAACTAAGATCAATGTGGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR CCA 90 bp TTTAGGCTTCAAGATAATTGTGATTTCATCGCACCCCAGATACTTCCAAGTGGACTAGACAGAGGACTCTaGATTTCTTTAATAAGTGTT +
Preference number: 4 (lower is better)
Translates to: FRLQDNCDFIAPQILPSGLDRGL*ISLISV
Trigger: AACACTTATTAAAGAAATCCAGAGTCCTCTGTCTAG...TCCACTTGGAAGTATCTGGGGTGCGATGAAATCACAATTATCTTGAAGCCTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR TCA 90 bp ATAATATTGTTTTGTTCTGAGAATTCTGCCCTTAGTCAAAACCACACAGTCATGTACCTCAGATTCGGTTaGATTTCTAACTTCCTGAAA +
Preference number: 4 (lower is better)
Translates to: IILFCSENSALSQNHTVMYLRFG*ISNFLK
Trigger: TTTCAGGAAGTTAGAAATTCAACCGAATCTGAGGTA...CATGACTGTGTGGTTTTGACTAAGGGCAGAATTCTCAGAACAAAACAATATTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR CCA 90 bp ATAATATTGTTTTGTTCTGAGAATTCTGCCCTTAGTCAAAACCACACAGTCATGCTAGACAGAGGACTCTaGATTTCTTTAATAAGTGTT +
Preference number: 4 (lower is better)
Translates to: IILFCSENSALSQNHTVMLDRGL*ISLISV
Trigger: AACACTTATTAAAGAAATCCAGAGTCCTCTGTCTAG...CATGACTGTGTGGTTTTGACTAAGGGCAGAATTCTCAGAACAAAACAATATTAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR CCA 90 bp ATAATATTGTTTTGTTCTGAGAATTCTGCCCTTAGTCAAAACCACACAGTCATGTCTGCTAATTCTTGCTaGTTTGAGGTTAATATGCTA +
Preference number: 4 (lower is better)
Translates to: IILFCSENSALSQNHTVMSANSC*FEVNML
Trigger: TAGCATATTAACCTCAAACCAGCAAGAATTAGCAGA...CATGACTGTGTGGTTTTGACTAAGGGCAGAATTCTCAGAACAAAACAATATTAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS GCA 90 bp GCTGCCTACTGCCACCACCAGCCTCAGGCCATCCTGGGTCCAACATaGACAGTGAATGCGGCCCTGGGTGTTGATGTCTGCCTTTACCTG +
Preference number: 5 (lower is better)
Translates to: AAYCHHQPQAILGPT*TVNAALGVDVCLYL
Trigger: CAGGTAAAGGCAGACATCAACACCCAGGGCCGCATTCACTGTGCATGTTGGACCCAGGATGGCCTGAGGCTGGTGGTGGCAGTAGGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS TCA 90 bp ACTGCCACCACCAGCCTCAGGCCATCCTGGGTCCAACATGCACAGTaGATGCGGCCCTGGGTGTTGATGTCTGCCTTTACCTGGGAATCA +
Preference number: 5 (lower is better)
Translates to: TATTSLRPSWVQHAQ*MRPWVLMSAFTWES
Trigger: TGATTCCCAGGTAAAGGCAGACATCAACACCCAGGGCCGCATTCACTGTGCATGTTGGACCCAGGATGGCCTGAGGCTGGTGGTGGCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS GCA 90 bp CTTCTGAGCGCTGTCCCAAATATAAGAATGCAGGCTGCTGCCTACTaGCACCACCAGCCTCAGGCCATCCTGGGTCCAACATGCACAGTG +
Preference number: 5 (lower is better)
Translates to: LLSAVPNIRMQAAAY*HHQPQAILGPTCTV
Trigger: CACTGTGCATGTTGGACCCAGGATGGCCTGAGGCTGGTGGTGGCAGTAGGCAGCAGCCTGCATTCTTATATTTGGGACAGCGCTCAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS GCA 90 bp GAAGAGTCTTCTGAGCGCTGTCCCAAATATAAGAATGCAGGCTGCTaGCTACTGCCACCACCAGCCTCAGGCCATCCTGGGTCCAACATG +
Preference number: 5 (lower is better)
Translates to: EESSERCPKYKNAGC*LLPPPASGHPGSNM
Trigger: CATGTTGGACCCAGGATGGCCTGAGGCTGGTGGTGGCAGTAGGCAGCAGCCTGCATTCTTATATTTGGGACAGCGCTCAGAAGACTCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS GCA 90 bp TGTGAAGAGTCTTCTGAGCGCTGTCCCAAATATAAGAATGCAGGCTaGTGCCTACTGCCACCACCAGCCTCAGGCCATCCTGGGTCCAAC +
Preference number: 5 (lower is better)
Translates to: CEESSERCPKYKNAG*CLLPPPASGHPGSN
Trigger: GTTGGACCCAGGATGGCCTGAGGCTGGTGGTGGCAGTAGGCAGCAGCCTGCATTCTTATATTTGGGACAGCGCTCAGAAGACTCTTCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS CCA 90 bp ATAGGGCTGGGACACAGCTGCCACACAGTGACATGCTTCTCATGCTaGACAGCGAGTAGAACAGGTGTATCATCTGCAACAGGTGGGGCC +
Preference number: 5 (lower is better)
Translates to: IGLGHSCHTVTCFSC*TASRTGVSSATGGA
Trigger: GGCCCCACCTGTTGCAGATGATACACCTGTTCTACTCGCTGTCCAGCATGAGAAGCATGTCACTGTGTGGCAGCTGTGTCCCAGCCCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295148.9
ENST00000406895.3
ENST00000443232.1
CDS-3UTR CAA 90 bp GTCACTGCTCTCCCACAGCTGATTACAGACATTGCCTGTGCTTCCTACCCCAGCGCAGTGGGAGTCTCATaGGCGAGTGTCCAGTGTCAA +
Preference number: 5 (lower is better)
Translates to: VTALPQLITDIACASYPSAVGVS*ASVQCQ
Trigger: TTGACACTGGACACTCGCCAATGAGACTCCCACTGC...GCTGGGGTAGGAAGCACAGGCAATGTCTGTAATCAGCTGTGGGAGAGCAGTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR CAA 90 bp TGGCAAGCGCTTCGCCTGAGTGCAGTGGGAGTCTCATTGGCGAGTGTCCAGTGTAGCTTCAATGCAGCTTaGGACAAGGGACACAAAGCC +
Preference number: 5 (lower is better)
Translates to: WQALRLSAVGVSLASVQCSFNAA*DKGHKA
Trigger: GGCTTTGTGTCCCTTGTCCAAAGCTGCATTGAAGCT...ACACTGGACACTCGCCAATGAGACTCCCACTGCACTCAGGCGAAGCGCTTGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS GCA 90 bp TCCATAGGGCTGGGACACAGCTGCCACACAGTGACATGCTTCTCATaGTGGACAGCGAGTAGAACAGGTGTATCATCTGCAACAGGTGGG +
Preference number: 5 (lower is better)
Translates to: SIGLGHSCHTVTCFS*WTASRTGVSSATGG
Trigger: CCCACCTGTTGCAGATGATACACCTGTTCTACTCGCTGTCCAGCATGAGAAGCATGTCACTGTGTGGCAGCTGTGTCCCAGCCCTATGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295148.9
ENST00000406895.3
ENST00000443232.1
CDS-3UTR CAA 90 bp GTCACTGCTCTCCCACAGCTGATTACAGACATTGCCTGTGCTTCCTACCCCAGCGATCGGATGCACTGCTaGATGCAACGCATTCAGTCC +
Preference number: 5 (lower is better)
Translates to: VTALPQLITDIACASYPSDRMHC*MQRIQS
Trigger: GGACTGAATGCGTTGCATCAAGCAGTGCATCCGATC...GCTGGGGTAGGAAGCACAGGCAATGTCTGTAATCAGCTGTGGGAGAGCAGTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR CAA 90 bp CAGTGTGGTAGCAGCATCGGCACAACCTCAAGTGGAACCCAGAGGGGACAAATTGCAGTGGGAGTCTCATaGGCGAGTGTCCAGTGTCAA +
Preference number: 5 (lower is better)
Translates to: QCGSSIGTTSSGTQRGQIAVGVS*ASVQCQ
Trigger: TTGACACTGGACACTCGCCAATGAGACTCCCACTGC...AATTTGTCCCCTCTGGGTTCCACTTGAGGTTGTGCCGATGCTGCTACCACACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS TCA 90 bp CAGCCCTGGGGAAGGATAGGTAGTGATCCTCTAATCTCACAAGTCTaGGACGTCAGCCATTTGCTTGACTCCATAGGGCTGGGACACAGC +
Preference number: 5 (lower is better)
Translates to: QPWGRIGSDPLISQV*DVSHLLDSIGLGHS
Trigger: GCTGTGTCCCAGCCCTATGGAGTCAAGCAAATGGCTGACGTCTCAGACTTGTGAGATTAGAGGATCACTACCTATCCTTCCCCAGGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295148.9
ENST00000406895.3
ENST00000443232.1
CDS GCA 90 bp TTGCTTGACTCCATAGGGCTGGGACACAGCTGCCACACAGTGACATaGTTCTCATGCTGGACAGCGAGTAGAACAGGTGTATCATCTGCA +
Preference number: 5 (lower is better)
Translates to: LLDSIGLGHSCHTVT*FSCWTASRTGVSSA
Trigger: TGCAGATGATACACCTGTTCTACTCGCTGTCCAGCATGAGAAGCATGTCACTGTGTGGCAGCTGTGTCCCAGCCCTATGGAGTCAAGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295148.9
ENST00000406895.3
ENST00000443232.1
CDS-3UTR CAA 90 bp AGCAGCATCGGCACAACCTCAAGTGGAACCCAGAGGGGACAAATTCCCTTGAAAGATCGGATGCACTGCTaGATGCAACGCATTCAGTCC +
Preference number: 5 (lower is better)
Translates to: SSIGTTSSGTQRGQIPLKDRMHC*MQRIQS
Trigger: GGACTGAATGCGTTGCATCAAGCAGTGCATCCGATC...TTTCAAGGGAATTTGTCCCCTCTGGGTTCCACTTGAGGTTGTGCCGATGCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR CAA 90 bp AGGGTTTGGTTTAAATTCTGGGAGGTCCAGGCAACATCAGAGCCACTTCCTGTTATGCGGCCCTGGGTGTaGATGTCTGCCTTTACCTGG +
Preference number: 5 (lower is better)
Translates to: RVWFKFWEVQATSEPLPVMRPWV*MSAFTW
Trigger: CCAGGTAAAGGCAGACATCAACACCCAGGGCCGCAT...AACAGGAAGTGGCTCTGATGTTGCCTGGACCTCCCAGAATTTAAACCAAACCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS TCA 90 bp GCCACAGATCTTATCCAATGGAAGCTCAGTAGCTATAGCAACCTGTaGGTCCACAGTTGCTGTGATGGAGCAGACGTGGCTGTCCACATC +
Preference number: 5 (lower is better)
Translates to: ATDLIQWKLSSYSNL*VHSCCDGADVAVHI
Trigger: GATGTGGACAGCCACGTCTGCTCCATCACAGCAACTGTGGACTCACAGGTTGCTATAGCTACTGAGCTTCCATTGGATAAGATCTGTGGC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR CAA 90 bp TGCTTCCTACCCCAGCAGCTGTCTAGTGCACTTGAACCACAAAATGGGCCCTCAAACTGTCCAATGACTTaGGAGTCCCCAAACTTGACC +
Preference number: 5 (lower is better)
Translates to: CFLPQQLSSALEPQNGPSNCPMT*ESPNLT
Trigger: GGTCAAGTTTGGGGACTCCAAAGTCATTGGACAGTT...TGAGGGCCCATTTTGTGGTTCAAGTGCACTAGACAGCTGCTGGGGTAGGAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR CAA 90 bp TTCAAGATAATTGTGATTTCATCGCACCCCAGATACTTCCAAGTGGAGCCAGGCATGCGGCCCTGGGTGTaGATGTCTGCCTTTACCTGG +
Preference number: 5 (lower is better)
Translates to: FKIIVISSHPRYFQVEPGMRPWV*MSAFTW
Trigger: CCAGGTAAAGGCAGACATCAACACCCAGGGCCGCAT...GCCTGGCTCCACTTGGAAGTATCTGGGGTGCGATGAAATCACAATTATCTTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR CAA 90 bp CTGAGCTCTGCTACACAGCAGCGAGCCTCAGCTCAGGGGAAACAGGGGGAAACCAGAAACATATCCCTTTaGGTCTTTCAGTGTTCTCTA +
Preference number: 5 (lower is better)
Translates to: LSSATQQRASAQGKQGETRNISL*VFQCSL
Trigger: TAGAGAACACTGAAAGACCAAAAGGGATATGTTTCT...GGTTTCCCCCTGTTTCCCCTGAGCTGAGGCTCGCTGCTGTGTAGCAGAGCTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR CAA 90 bp GGGACACTCATGAGTGGCCACAGCACAAAATCCTGCAGTAGGACTTACCTGGGCTTCAGAAAGACACCGTaGCATTTCAACCAGGTTCCT +
Preference number: 5 (lower is better)
Translates to: GTLMSGHSTKSCSRTYLGFRKTP*HFNQVP
Trigger: AGGAACCTGGTTGAAATGCAACGGTGTCTTTCTGAA...GCCCAGGTAAGTCCTACTGCAGGATTTTGTGCTGTGGCCACTCATGAGTGTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR CAA 90 bp GCAGAAGCCAGTGGGTCTCTGGTCCTCCTTGGAGCTCTGCTAATTCTTGCTGGTTTCGTCAGCCAGAATTaGTTAAGGAAGCAAGAGGGT +
Preference number: 5 (lower is better)
Translates to: AEASGSLVLLGALLILAGFVSQN*LRKQEG
Trigger: ACCCTCTTGCTTCCTTAACAAATTCTGGCTGACGAA...ACCAGCAAGAATTAGCAGAGCTCCAAGGAGGACCAGAGACCCACTGGCTTCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR CAA 90 bp CCTGAGAGCAGAAGCCAGTGGGTCTCTGGTCCTCCTTGGAGCTCTGCTAATTCTTTCGTCAGCCAGAATTaGTTAAGGAAGCAAGAGGGT +
Preference number: 5 (lower is better)
Translates to: PESRSQWVSGPPWSSANSFVSQN*LRKQEG
Trigger: ACCCTCTTGCTTCCTTAACAAATTCTGGCTGACGAA...AGAATTAGCAGAGCTCCAAGGAGGACCAGAGACCCACTGGCTTCTGCTCTCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS GCA 90 bp CTGGGTCCAACATGCACAGTGAATGCGGCCCTGGGTGTTGATGTCTaGCTTTACCTGGGAATCATCAGAGTGAACATTAGGGAAAATGGA +
Preference number: 5 (lower is better)
Translates to: LGPTCTVNAALGVDV*LYLGIIRVNIRENG
Trigger: TCCATTTTCCCTAATGTTCACTCTGATGATTCCCAGGTAAAGGCAGACATCAACACCCAGGGCCGCATTCACTGTGCATGTTGGACCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295148.9
ENST00000406895.3
ENST00000443232.1
CDS-3UTR CAA 90 bp TTAAATTCTGGGAGGTCCAGGCAACATCAGAGCCACTTCCTGTTCCTGAGAGCAAGCTTCAATGCAGCTTaGGACAAGGGACACAAAGCC +
Preference number: 5 (lower is better)
Translates to: LNSGRSRQHQSHFLFLRASFNAA*DKGHKA
Trigger: GGCTTTGTGTCCCTTGTCCAAAGCTGCATTGAAGCT...TGCTCTCAGGAACAGGAAGTGGCTCTGATGTTGCCTGGACCTCCCAGAATTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR CAA 90 bp GCTGATTACAGACATTGCCTGTGCTTCCTACCCCAGCAGCTGTCTAGTGCACTTAGTGTCAAGCAGGCCTaGTTTGTAATGGTCTCATCT +
Preference number: 5 (lower is better)
Translates to: ADYRHCLCFLPQQLSSALSVKQA*FVMVSS
Trigger: AGATGAGACCATTACAAACAAGGCCTGCTTGACACT...AAGTGCACTAGACAGCTGCTGGGGTAGGAAGCACAGGCAATGTCTGTAATCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR CAA 90 bp GTCAAGCAGGCCTTGTTTGTAATGGTCTCATCTGAAGAGCTACACAGCAAGGACAGCTGTCTAGTGCACTaGAACCACAAAATGGGCCCT +
Preference number: 5 (lower is better)
Translates to: VKQALFVMVSSEELHSKDSCLVH*NHKMGP
Trigger: AGGGCCCATTTTGTGGTTCAAGTGCACTAGACAGCT...GTCCTTGCTGTGTAGCTCTTCAGATGAGACCATTACAAACAAGGCCTGCTTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR CAA 90 bp AATTCTGGGAGGTCCAGGCAACATCAGAGCCACTTCCTGTTCCTGAGAGCAGAAATTATATTACAAGTGTaGGAAGCCACTGCCACTACG +
Preference number: 5 (lower is better)
Translates to: NSGRSRQHQSHFLFLRAEIILQV*EATATT
Trigger: CGTAGTGGCAGTGGCTTCCAACACTTGTAATATAAT...TTCTGCTCTCAGGAACAGGAAGTGGCTCTGATGTTGCCTGGACCTCCCAGAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR CAA 90 bp GCAGAAGCCAGTGGGTCTCTGGTCCTCCTTGGAGCTCTGCTAATTCTTGCTGGTAGAAACATATCCCTTTaGGTCTTTCAGTGTTCTCTA +
Preference number: 5 (lower is better)
Translates to: AEASGSLVLLGALLILAGRNISL*VFQCSL
Trigger: TAGAGAACACTGAAAGACCAAAAGGGATATGTTTCT...ACCAGCAAGAATTAGCAGAGCTCCAAGGAGGACCAGAGACCCACTGGCTTCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR CAA 90 bp TGCTTCCTACCCCAGCAGCTGTCTAGTGCACTTGAACCACAAAATGGGCCCTCAACCCTCAGACTTATGTaGATTGAAATGTATGTGAGT +
Preference number: 5 (lower is better)
Translates to: CFLPQQLSSALEPQNGPSTLRLM*IEMYVS
Trigger: ACTCACATACATTTCAATCAACATAAGTCTGAGGGT...TGAGGGCCCATTTTGTGGTTCAAGTGCACTAGACAGCTGCTGGGGTAGGAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR CAA 90 bp AAGAGGGTTTGGTTTAAATTCTGGGAGGTCCAGGCAACATCAGAGCCACTTCCTCAACAGCCCTTTGTTTaGGTGACAAAAATCTGGGGA +
Preference number: 5 (lower is better)
Translates to: KRVWFKFWEVQATSEPLPQQPFV*VTKIWG
Trigger: TCCCCAGATTTTTGTCACCAAAACAAAGGGCTGTTG...AGGAAGTGGCTCTGATGTTGCCTGGACCTCCCAGAATTTAAACCAAACCCTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR CAA 90 bp GAGTACCTGGACCTTCGTCAGCCAGAATTTGTTAAGGAAGCAAGAGGGTTTGGTTTCAGAAAGACACCGTaGCATTTCAACCAGGTTCCT +
Preference number: 5 (lower is better)
Translates to: EYLDLRQPEFVKEARGFGFRKTP*HFNQVP
Trigger: AGGAACCTGGTTGAAATGCAACGGTGTCTTTCTGAA...ACCAAACCCTCTTGCTTCCTTAACAAATTCTGGCTGACGAAGGTCCAGGTACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR CAA 90 bp CATAAACACCACTTTCGGAGCCATCTAATAAAGACTGAGCTCTGCTACACAGCAAGCTGTCTAGTGCACTaGAACCACAAAATGGGCCCT +
Preference number: 5 (lower is better)
Translates to: HKHHFRSHLIKTELCYTASCLVH*NHKMGP
Trigger: AGGGCCCATTTTGTGGTTCAAGTGCACTAGACAGCT...TGCTGTGTAGCAGAGCTCAGTCTTTATTAGATGGCTCCGAAAGTGGTGTTTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR CAA 90 bp AGCAGCATCGGCACAACCTCAAGTGGAACCCAGAGGGGACAAATTCCCTTGAAACTGATACTTCAGAATTaGTTTCAGAATCAGTTGCCT +
Preference number: 5 (lower is better)
Translates to: SSIGTTSSGTQRGQIPLKLILQN*FQNQLP
Trigger: AGGCAACTGATTCTGAAACAAATTCTGAAGTATCAG...TTTCAAGGGAATTTGTCCCCTCTGGGTTCCACTTGAGGTTGTGCCGATGCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR CAA 90 bp GTCAAGCAGGCCTTGTTTGTAATGGTCTCATCTGAAGAGCTACACAGCAAGGACATTATATTACAAGTGTaGGAAGCCACTGCCACTACG +
Preference number: 5 (lower is better)
Translates to: VKQALFVMVSSEELHSKDIILQV*EATATT
Trigger: CGTAGTGGCAGTGGCTTCCAACACTTGTAATATAAT...GTCCTTGCTGTGTAGCTCTTCAGATGAGACCATTACAAACAAGGCCTGCTTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR CAA 90 bp ATCGGCACAACCTCAAGTGGAACCCAGAGGGGACAAATTCCCTTGAAATTTCATCAACAGCCCTTTGTTTaGGTGACAAAAATCTGGGGA +
Preference number: 5 (lower is better)
Translates to: IGTTSSGTQRGQIPLKFHQQPFV*VTKIWG
Trigger: TCCCCAGATTTTTGTCACCAAAACAAAGGGCTGTTG...ATGAAATTTCAAGGGAATTTGTCCCCTCTGGGTTCCACTTGAGGTTGTGCCGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR CAA 90 bp AGTGTCAAGCAGGCCTTGTTTGTAATGGTCTCATCTGAAGAGCTACACAGCAAGCCCAACTCCATCCTTTaGATAAAGGTTACCTTAGGT +
Preference number: 5 (lower is better)
Translates to: SVKQALFVMVSSEELHSKPNSIL*IKVTLG
Trigger: ACCTAAGGTAACCTTTATCAAAAGGATGGAGTTGGG...CTTGCTGTGTAGCTCTTCAGATGAGACCATTACAAACAAGGCCTGCTTGACACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR CAA 90 bp TTCAAGATAATTGTGATTTCATCGCACCCCAGATACTTCCAAGTGGAGCCAGGCCCCAACTCCATCCTTTaGATAAAGGTTACCTTAGGT +
Preference number: 5 (lower is better)
Translates to: FKIIVISSHPRYFQVEPGPNSIL*IKVTLG
Trigger: ACCTAAGGTAACCTTTATCAAAAGGATGGAGTTGGG...GCCTGGCTCCACTTGGAAGTATCTGGGGTGCGATGAAATCACAATTATCTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR CAA 90 bp GTAACAGACAGACAGGAGTCCCCAAGGGCACAAAATAGTTTCTTTCCAGATGATAGTGTCAAGCAGGCCTaGTTTGTAATGGTCTCATCT +
Preference number: 5 (lower is better)
Translates to: VTDRQESPRAQNSFFPDDSVKQA*FVMVSS
Trigger: AGATGAGACCATTACAAACAAGGCCTGCTTGACACT...ATCATCTGGAAAGAAACTATTTTGTGCCCTTGGGGACTCCTGTCTGTCTGTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS GCA 90 bp ACAAGTGTTGGAAGCCACTGCCACTACGTGGGCTTTAAGATTAAATaGTATCAGATCAGGAACCAGAATGCCTGGAATAGTGACTTTTCT +
Preference number: 5 (lower is better)
Translates to: TSVGSHCHYVGFKIK*YQIRNQNAWNSDFS
Trigger: AGAAAAGTCACTATTCCAGGCATTCTGGTTCCTGATCTGATAGCATTTAATCTTAAAGCCCACGTAGTGGCAGTGGCTTCCAACACTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR CAA 90 bp GAGTACCTGGACCTTCGTCAGCCAGAATTTGTTAAGGAAGCAAGAGGGTTTGGTACCCTCAGACTTATGTaGATTGAAATGTATGTGAGT +
Preference number: 5 (lower is better)
Translates to: EYLDLRQPEFVKEARGFGTLRLM*IEMYVS
Trigger: ACTCACATACATTTCAATCAACATAAGTCTGAGGGT...ACCAAACCCTCTTGCTTCCTTAACAAATTCTGGCTGACGAAGGTCCAGGTACTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR CAA 90 bp CCCACATTGATCTTAGTTAACAGTCTTGTAGTTCCCTCTTTAGGCTTCAAGATACACTCACTGATCAATTaGTTATGCGCCGTGACTGAA +
Preference number: 5 (lower is better)
Translates to: PTLILVNSLVVPSLGFKIHSLIN*LCAVTE
Trigger: TTCAGTCACGGCGCATAACAAATTGATCAGTGAGTG...TATCTTGAAGCCTAAAGAGGGAACTACAAGACTGTTAACTAAGATCAATGTGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS GCA 90 bp TTCTTCCCATTATGCAGACGGTTTGTAAGTTCAGAAAGACACCGTTaGATTTCAACCAGGTTCCTAGATAAAATTTCCACTTCCTTAGAC +
Preference number: 5 (lower is better)
Translates to: FFPLCRRFVSSERHR*ISTRFLDKISTSLD
Trigger: GTCTAAGGAAGTGGAAATTTTATCTAGGAACCTGGTTGAAATGCAACGGTGTCTTTCTGAACTTACAAACCGTCTGCATAATGGGAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS TCA 90 bp GTAAATGATGTGAACATAAGGAAGATCTTGAGAGAGTGGATACACTaGAGAGGATTTCTTCCCATTATGCAGACGGTTTGTAAGTTCAGA +
Preference number: 5 (lower is better)
Translates to: VNDVNIRKILREWIH*RGFLPIMQTVCKFR
Trigger: TCTGAACTTACAAACCGTCTGCATAATGGGAAGAAATCCTCTTCAGTGTATCCACTCTCTCAAGATCTTCCTTATGTTCACATCATTTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS TCA 90 bp TGTTCTCTAATCGAATTTGCTGGATGTTTGGGACTGAAGATGGAATaGCAGAGTAGATCAAAATTATATTACAAGTGTTGGAAGCCACTG +
Preference number: 5 (lower is better)
Translates to: CSLIEFAGCLGLKME*QSRSKLYYKCWKPL
Trigger: CAGTGGCTTCCAACACTTGTAATATAATTTTGATCTACTCTGTCATTCCATCTTCAGTCCCAAACATCCAGCAAATTCGATTAGAGAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS GCA 90 bp AATGACAGAGTAGATCAAAATTATATTACAAGTGTTGGAAGCCACTaGCACTACGTGGGCTTTAAGATTAAATGCTATCAGATCAGGAAC +
Preference number: 5 (lower is better)
Translates to: NDRVDQNYITSVGSH*HYVGFKIKCYQIRN
Trigger: GTTCCTGATCTGATAGCATTTAATCTTAAAGCCCACGTAGTGGCAGTGGCTTCCAACACTTGTAATATAATTTTGATCTACTCTGTCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS-3UTR CAA 90 bp ATAATATTGTTTTGTTCTGAGAATTCTGCCCTTAGTCAAAACCACACAGTCATGCTGATACTTCAGAATTaGTTTCAGAATCAGTTGCCT +
Preference number: 5 (lower is better)
Translates to: IILFCSENSALSQNHTVMLILQN*FQNQLP
Trigger: AGGCAACTGATTCTGAAACAAATTCTGAAGTATCAG...CATGACTGTGTGGTTTTGACTAAGGGCAGAATTCTCAGAACAAAACAATATTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS GCA 72 bp TGCCACCACCAGCCTCAGGCCATCCTGGGTCCAACATaGACAGTGAATGCGGCCCTGGGTGTTGATGTCTGC +
Preference number: 6 (lower is better)
Translates to: CHHQPQAILGPT*TVNAALGVDVC
Trigger: GCAGACATCAACACCCAGGGCCGCATTCACTGTGCATGTTGGACCCAGGATGGCCTGAGGCTGGTGGTGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295148.9
ENST00000406895.3
ENST00000443232.1
CDS GCA 72 bp TCTGAGCGCTGTCCCAAATATAAGAATGCAGGCTGCTaGCTACTGCCACCACCAGCCTCAGGCCATCCTGGG +
Preference number: 6 (lower is better)
Translates to: SERCPKYKNAGC*LLPPPASGHPG
Trigger: CCCAGGATGGCCTGAGGCTGGTGGTGGCAGTAGGCAGCAGCCTGCATTCTTATATTTGGGACAGCGCTCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS GCA 72 bp TCTTCTGAGCGCTGTCCCAAATATAAGAATGCAGGCTaGTGCCTACTGCCACCACCAGCCTCAGGCCATCCT +
Preference number: 6 (lower is better)
Translates to: SSERCPKYKNAG*CLLPPPASGHP
Trigger: AGGATGGCCTGAGGCTGGTGGTGGCAGTAGGCAGCAGCCTGCATTCTTATATTTGGGACAGCGCTCAGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS GCA 72 bp TCCATAGGGCTGGGACACAGCTGCCACACAGTGACATaGTTCTCATGCTGGACAGCGAGTAGAACAGGTGTA +
Preference number: 6 (lower is better)
Translates to: SIGLGHSCHTVT*FSCWTASRTGV
Trigger: TACACCTGTTCTACTCGCTGTCCAGCATGAGAAGCATGTCACTGTGTGGCAGCTGTGTCCCAGCCCTATGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295148.9
ENST00000406895.3
ENST00000443232.1
CDS CCA 72 bp AGGTCTCACTGCCTCACAAAAACACCAATCTCTCTGTaGCCGCCCAACATCACGCCGCCGCACATAAGAAGT +
Preference number: 6 (lower is better)
Translates to: RSHCLTKTPISL*PPNITPPHIRS
Trigger: ACTTCTTATGTGCGGCGGCGTGATGTTGGGCGGCCACAGAGAGATTGGTGTTTTTGTGAGGCAGTGAGACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295148.9
CDS TCA 72 bp TCGGTCCAGGCAAGGCCATGGATCGGATGCACTGCTTaGTGCAACGCATTCAGTCCAGTCCTGAGTAGTTTT +
Preference number: 6 (lower is better)
Translates to: SVQARPWIGCTA*CNAFSPVLSSF
Trigger: AAAACTACTCAGGACTGGACTGAATGCGTTGCATCAAGCAGTGCATCCGATCCATGGCCTTGCCTGGACCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295148.9
ENST00000406895.3
ENST00000443232.1
CDS GCA 72 bp CTGGGACACAGCTGCCACACAGTGACATGCTTCTCATaGTGGACAGCGAGTAGAACAGGTGTATCATCTGCA +
Preference number: 6 (lower is better)
Translates to: LGHSCHTVTCFS*WTASRTGVSSA
Trigger: TGCAGATGATACACCTGTTCTACTCGCTGTCCAGCATGAGAAGCATGTCACTGTGTGGCAGCTGTGTCCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295148.9
ENST00000406895.3
ENST00000443232.1
CDS CCA 72 bp GGACACAGCTGCCACACAGTGACATGCTTCTCATGCTaGACAGCGAGTAGAACAGGTGTATCATCTGCAACA +
Preference number: 6 (lower is better)
Translates to: GHSCHTVTCFSC*TASRTGVSSAT
Trigger: TGTTGCAGATGATACACCTGTTCTACTCGCTGTCCAGCATGAGAAGCATGTCACTGTGTGGCAGCTGTGTCC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295148.9
ENST00000406895.3
ENST00000443232.1
CDS TCA 72 bp CTTATCCAATGGAAGCTCAGTAGCTATAGCAACCTGTaGGTCCACAGTTGCTGTGATGGAGCAGACGTGGCT +
Preference number: 6 (lower is better)
Translates to: LIQWKLSSYSNL*VHSCCDGADVA
Trigger: AGCCACGTCTGCTCCATCACAGCAACTGTGGACTCACAGGTTGCTATAGCTACTGAGCTTCCATTGGATAAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS TCA 72 bp GGAAGGATAGGTAGTGATCCTCTAATCTCACAAGTCTaGGACGTCAGCCATTTGCTTGACTCCATAGGGCTG +
Preference number: 6 (lower is better)
Translates to: GRIGSDPLISQV*DVSHLLDSIGL
Trigger: CAGCCCTATGGAGTCAAGCAAATGGCTGACGTCTCAGACTTGTGAGATTAGAGGATCACTACCTATCCTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295148.9
ENST00000406895.3
ENST00000443232.1
CDS CCA 72 bp GTCAGAATAGCACATTTTGGGTGCCACACACAGCCCTaGGGAAGGATAGGTAGTGATCCTCTAATCTCACAA +
Preference number: 6 (lower is better)
Translates to: VRIAHFGCHTQP*GRIGSDPLISQ
Trigger: TTGTGAGATTAGAGGATCACTACCTATCCTTCCCCAGGGCTGTGTGTGGCACCCAAAATGTGCTATTCTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295148.9
ENST00000406895.3
ENST00000443232.1
CDS TCA 72 bp GGTAACTGCCTTCTTAAAGGTCACAAGGACCAAATGTaGAGAATCTTGGCCAGTTCCTGTCAAGTAGTCCTT +
Preference number: 6 (lower is better)
Translates to: GNCLLKGHKDQM*RILASSCQVVL
Trigger: AAGGACTACTTGACAGGAACTGGCCAAGATTCTTCACATTTGGTCCTTGTGACCTTTAAGAAGGCAGTTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS GCA 72 bp GAGAGTGGATACACTGAAGAGGATTTCTTCCCATTATaGAGACGGTTTGTAAGTTCAGAAAGACACCGTTGC +
Preference number: 6 (lower is better)
Translates to: ESGYTEEDFFPL*RRFVSSERHRC
Trigger: GCAACGGTGTCTTTCTGAACTTACAAACCGTCTGCATAATGGGAAGAAATCCTCTTCAGTGTATCCACTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS TCA 72 bp GTGAACATAAGGAAGATCTTGAGAGAGTGGATACACTaGAGAGGATTTCTTCCCATTATGCAGACGGTTTGT +
Preference number: 6 (lower is better)
Translates to: VNIRKILREWIH*RGFLPIMQTVC
Trigger: ACAAACCGTCTGCATAATGGGAAGAAATCCTCTTCAGTGTATCCACTCTCTCAAGATCTTCCTTATGTTCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS TCA 72 bp ATTTCTTTAATAAGTGTTCTTCCAGGCCTTCCATTCTaGCTACTGGTATTAACTGTCAGCAACAGCCCTTTG +
Preference number: 6 (lower is better)
Translates to: ISLISVLPGLPF*LLVLTVSNSPL
Trigger: CAAAGGGCTGTTGCTGACAGTTAATACCAGTAGTCAGAATGGAAGGCCTGGAAGAACACTTATTAAAGAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS CCA 72 bp ATTATATTACAAGTGTTGGAAGCCACTGCCACTACGTaGGCTTTAAGATTAAATGCTATCAGATCAGGAACC +
Preference number: 6 (lower is better)
Translates to: IILQVLEATATT*ALRLNAIRSGT
Trigger: GGTTCCTGATCTGATAGCATTTAATCTTAAAGCCCACGTAGTGGCAGTGGCTTCCAACACTTGTAATATAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS GCA 72 bp TTATGCAGACGGTTTGTAAGTTCAGAAAGACACCGTTaGATTTCAACCAGGTTCCTAGATAAAATTTCCACT +
Preference number: 6 (lower is better)
Translates to: LCRRFVSSERHR*ISTRFLDKIST
Trigger: AGTGGAAATTTTATCTAGGAACCTGGTTGAAATGCAACGGTGTCTTTCTGAACTTACAAACCGTCTGCATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS GCA 72 bp GTAGATCAAAATTATATTACAAGTGTTGGAAGCCACTaGCACTACGTGGGCTTTAAGATTAAATGCTATCAG +
Preference number: 6 (lower is better)
Translates to: VDQNYITSVGSH*HYVGFKIKCYQ
Trigger: CTGATAGCATTTAATCTTAAAGCCCACGTAGTGGCAGTGGCTTCCAACACTTGTAATATAATTTTGATCTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS CAA 90 bp CTACCAAAATTAGTAATAGTTGGTCTGTCAAGAAACATATCCCTTTaGGTCTTTCAGTGTTCTCTAATCGAATTTGCTGGATGTTTGGGA +
Preference number: 6 (lower is better)
Translates to: LPKLVIVGLSRNISL*VFQCSLIEFAGCLG
Trigger: TCCCAAACATCCAGCAAATTCGATTAGAGAACACTGAAAGACCAAAAGGGATATGTTTCTTGACAGACCAACTATTACTAATTTTGGTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3
CDS CAA 72 bp TTAGTAATAGTTGGTCTGTCAAGAAACATATCCCTTTaGGTCTTTCAGTGTTCTCTAATCGAATTTGCTGGA +
Preference number: 6 (lower is better)
Translates to: LVIVGLSRNISL*VFQCSLIEFAG
Trigger: TCCAGCAAATTCGATTAGAGAACACTGAAAGACCAAAAGGGATATGTTTCTTGACAGACCAACTATTACTAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295148.9
ENST00000406895.3