RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for WBP2NL (Homo sapiens)

Ensembl gene IDs: ENSG00000183066

Ensembl transcript IDs: ENST00000328823.13, ENST00000329620.9, ENST00000412113.5, ENST00000436265.5, ENST00000445185.1, ENST00000461730.1, ENST00000470812.1, ENST00000475341.5, ENST00000487176.1, ENST00000543212.5

Found 309 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGGTGTGCCACGCAGCACCACGTGGGTCCAAACTGTGGCTCCACTTaGTTCTATCCTTACACAGTCACAGCCTTTGGTTGTACTGGGGCA +
Preference number: 1 (lower is better)
Translates to: RCATQHHVGPNCGST*FYPYTVTAFGCTGA
Trigger: TGCCCCAGTACAACCAAAGGCTGTGACTGTGTAAGGATAGAACCAAGTGGAGCCACAGTTTGGACCCACGTGGTGCTGCGTGGCACACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329620.9
3UTR TCA 90 bp TTGCAGCTGGGGAAGAGACAGGAAGAGCGGAATCCACCAGCACAGTaGGTGAGTCAGAAAGAAAGTACTCAAAACGTCAGTGAGGAGCTG +
Preference number: 1 (lower is better)
Translates to: LQLGKRQEERNPPAQ*VSQKESTQNVSEEL
Trigger: CAGCTCCTCACTGACGTTTTGAGTACTTTCTTTCTGACTCACTCACTGTGCTGGTGGATTCCGCTCTTCCTGTCTCTTCCCCAGCTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329620.9
3UTR GCA 90 bp ACCTTCCCCCATAAGATTGCCCTTCCAAAGGGTGGAACAACTACCTaGGAGAAGCCTGTGATCACATACCTGAGTCGTCCTCCTTATCCT +
Preference number: 1 (lower is better)
Translates to: TFPHKIALPKGGTTT*EKPVITYLSRPPYP
Trigger: AGGATAAGGAGGACGACTCAGGTATGTGATCACAGGCTTCTCGCAGGTAGTTGTTCCACCCTTTGGAAGGGCAATCTTATGGGGGAAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328823.13
3UTR CCA 90 bp CTCCACTTGGTTCTATCCTTACACAGTCACAGCCTTTGGTTGTACTaGGGCAGTTTGGTGGACCAGGTAAACAGGTACCCTTTGCACAGG +
Preference number: 1 (lower is better)
Translates to: LHLVLSLHSHSLWLY*GSLVDQVNRYPLHR
Trigger: CCTGTGCAAAGGGTACCTGTTTACCTGGTCCACCAAACTGCCCCAGTACAACCAAAGGCTGTGACTGTGTAAGGATAGAACCAAGTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329620.9
3UTR CCA 90 bp AAACTGTGGCTCCACTTGGTTCTATCCTTACACAGTCACAGCCTTTaGTTGTACTGGGGCAGTTTGGTGGACCAGGTAAACAGGTACCCT +
Preference number: 1 (lower is better)
Translates to: KLWLHLVLSLHSHSL*LYWGSLVDQVNRYP
Trigger: AGGGTACCTGTTTACCTGGTCCACCAAACTGCCCCAGTACAACCAAAGGCTGTGACTGTGTAAGGATAGAACCAAGTGGAGCCACAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329620.9
3UTR CCA 90 bp TTGGTGGACCAGGTAAACAGGTACCCTTTGCACAGGAGAACATGGTaGAATTCCACCTTTAAGAAACTCGAACCTGCTACGCTTTTCAGG +
Preference number: 1 (lower is better)
Translates to: LVDQVNRYPLHRRTW*NSTFKKLEPATLFR
Trigger: CCTGAAAAGCGTAGCAGGTTCGAGTTTCTTAAAGGTGGAATTCCACCATGTTCTCCTGTGCAAAGGGTACCTGTTTACCTGGTCCACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329620.9
3UTR GCA 90 bp AGAAACTTCTCAGCATCTTGGTGCCAAATAAAATCTGGATACCTTTaGATAATCTTAGGATTTGTGAGAAGCCCACCAACAAAGCAGATG +
Preference number: 1 (lower is better)
Translates to: RNFSASWCQIKSGYL*IILGFVRSPPTKQM
Trigger: CATCTGCTTTGTTGGTGGGCTTCTCACAAATCCTAAGATTATGCAAAGGTATCCAGATTTTATTTGGCACCAAGATGCTGAGAAGTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329620.9
3UTR CCA 90 bp ATTTCCCTAACACTAGTCAAGCTGAACATCTTTTCAAACGTTTTCTaGCCATGCTATTGCCTTGGTTATTCGGCAATTCATATTTCTGTC +
Preference number: 1 (lower is better)
Translates to: ISLTLVKLNIFSNVF*PCYCLGYSAIHISV
Trigger: GACAGAAATATGAATTGCCGAATAACCAAGGCAATAGCATGGCCAGAAAACGTTTGAAAAGATGTTCAGCTTGACTAGTGTTAGGGAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328823.13
3UTR CCA 90 bp TGTTTCAGAAGCAGTCTGATGACCAGAAGAAACTTCTCAGCATCTTaGTGCCAAATAAAATCTGGATACCTTTGCATAATCTTAGGATTT +
Preference number: 1 (lower is better)
Translates to: CFRSSLMTRRNFSAS*CQIKSGYLCIILGF
Trigger: AAATCCTAAGATTATGCAAAGGTATCCAGATTTTATTTGGCACCAAGATGCTGAGAAGTTTCTTCTGGTCATCAGACTGCTTCTGAAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329620.9
3UTR CAA 90 bp GCCCTACCTAAGATTCTGGGGTCCCAAGGCAACAAGCTTTTAGACTaGACGGGACTGCCAGGACTGGATAGTGGCTGTTTCAGAAGCAGT +
Preference number: 2 (lower is better)
Translates to: ALPKILGSQGNKLLD*TGLPGLDSGCFRSS
Trigger: ACTGCTTCTGAAACAGCCACTATCCAGTCCTGGCAGTCCCGTCAAGTCTAAAAGCTTGTTGCCTTGGGACCCCAGAATCTTAGGTAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329620.9
3UTR-3UTR GCA 90 bp GAGGAGCTGAGGAACTCAGCACATGAGTGCTCTCAGCATGCAGAAGGCTCAGCTGGGAAACCTTATCCCTaGTCTAGTTGGTTGAGTCTC +
Preference number: 2 (lower is better)
Translates to: EELRNSAHECSQHAEGSAGKPYP*SSWLSL
Trigger: GAGACTCAACCAACTAGAGCAGGGATAAGGTTTCCC...AGCTGAGCCTTCTGCATGCTGAGAGCACTCATGTGCTGAGTTCCTCAGCTCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329620.9
3UTR CAA 90 bp CTGTGGCTCCACTTGGTTCTATCCTTACACAGTCACAGCCTTTGGTaGTACTGGGGCAGTTTGGTGGACCAGGTAAACAGGTACCCTTTG +
Preference number: 2 (lower is better)
Translates to: LWLHLVLSLHSHSLW*YWGSLVDQVNRYPL
Trigger: CAAAGGGTACCTGTTTACCTGGTCCACCAAACTGCCCCAGTACAACCAAAGGCTGTGACTGTGTAAGGATAGAACCAAGTGGAGCCACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329620.9
3UTR CAA 90 bp GTTCTATCCTTACACAGTCACAGCCTTTGGTTGTACTGGGGCAGTTaGGTGGACCAGGTAAACAGGTACCCTTTGCACAGGAGAACATGG +
Preference number: 2 (lower is better)
Translates to: VLSLHSHSLWLYWGS*VDQVNRYPLHRRTW
Trigger: CCATGTTCTCCTGTGCAAAGGGTACCTGTTTACCTGGTCCACCAAACTGCCCCAGTACAACCAAAGGCTGTGACTGTGTAAGGATAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329620.9
3UTR-3UTR TCA 90 bp GAGGTGATGCAGACCAACAGCACAGCTGAGAGGGCAGAATCATCACATTCCAGCTACCTCTTTGCTTGGTaGGTCTTCAAGGTTTACATC +
Preference number: 2 (lower is better)
Translates to: EVMQTNSTAERAESSHSSYLFAW*VFKVYI
Trigger: GATGTAAACCTTGAAGACTCACCAAGCAAAGAGGTA...GCTGGAATGTGATGATTCTGCCCTCTCAGCTGTGCTGTTGGTCTGCATCACCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412113.5
3UTR-3UTR TCA 90 bp AAGCTTTTAGACTTGACGGGACTGCCAGGACTGGATAGTGGCTGTTTCAGAAGCTCAATGACTCTAAGCTaGGTCGTCCTCCTTATCCTG +
Preference number: 2 (lower is better)
Translates to: KLLDLTGLPGLDSGCFRSSMTLS*VVLLIL
Trigger: CAGGATAAGGAGGACGACTCAGCTTAGAGTCATTGA...GCTTCTGAAACAGCCACTATCCAGTCCTGGCAGTCCCGTCAAGTCTAAAAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329620.9
3UTR-3UTR TCA 90 bp GAACAAGGGAAACCTTATCCCTGCTCTAGTTGGTTGAGTCTCTCCTCTCTTCCTAAGAAAGGCTGTCCTTaGGAACATGGGAGCATCTGG +
Preference number: 2 (lower is better)
Translates to: EQGKPYPCSSWLSLSSLPKKGCP*EHGSIW
Trigger: CCAGATGCTCCCATGTTCTCAAGGACAGCCTTTCTT...AGGAAGAGAGGAGAGACTCAACCAACTAGAGCAGGGATAAGGTTTCCCTTGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329620.9
ENST00000412113.5
ENST00000436265.5
ENST00000543212.5
3UTR-3UTR GCA 90 bp ACCAACAAAGCAGATGGTGGTGGGGATCTTGGTAACAGAAATAAATTTACAGAAGAGCCAGGAAGGTTCTaGTCCAGCAGGCTGGGGAGC +
Preference number: 2 (lower is better)
Translates to: TNKADGGGDLGNRNKFTEEPGRF*SSRLGS
Trigger: GCTCCCCAGCCTGCTGGAGCAGAACCTTCCTGGCTC...TTCTGTAAATTTATTTCTGTTACCAAGATCCCCACCACCATCTGCTTTGTTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329620.9
3UTR-3UTR CCA 90 bp TTAGGATTTGTGAGAAGCCCACCAACAAAGCAGATGGTGGTGGGGATCTTGGTACACAGTCACAGCCTTTaGTTGTACTGGGGCAGTTTG +
Preference number: 2 (lower is better)
Translates to: LGFVRSPPTKQMVVGILVHSHSL*LYWGSL
Trigger: CAAACTGCCCCAGTACAACCAAAGGCTGTGACTGTG...TACCAAGATCCCCACCACCATCTGCTTTGTTGGTGGGCTTCTCACAAATCCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329620.9
3UTR CAA 90 bp TGGTTGTACTGGGGCAGTTTGGTGGACCAGGTAAACAGGTACCCTTaGCACAGGAGAACATGGTGGAATTCCACCTTTAAGAAACTCGAA +
Preference number: 2 (lower is better)
Translates to: WLYWGSLVDQVNRYP*HRRTWWNSTFKKLE
Trigger: TTCGAGTTTCTTAAAGGTGGAATTCCACCATGTTCTCCTGTGCAAAGGGTACCTGTTTACCTGGTCCACCAAACTGCCCCAGTACAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329620.9
3UTR-3UTR TCA 90 bp ATAGAACAAATTGGACTGAGCCTTTGGGGGAAACAACTGTACCAGACAGTGGGAAAGAAAGGCTGTCCTTaGGAACATGGGAGCATCTGG +
Preference number: 2 (lower is better)
Translates to: IEQIGLSLWGKQLYQTVGKKGCP*EHGSIW
Trigger: CCAGATGCTCCCATGTTCTCAAGGACAGCCTTTCTT...TCCCACTGTCTGGTACAGTTGTTTCCCCCAAAGGCTCAGTCCAATTTGTTCTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329620.9
3UTR-3UTR TCA 90 bp CCAGAAGACTCTCAAGGCAAAGGCCAGGAAGAATATCATACGTTTCACTTCCTACCTGCTCTAGTTGGTTaGGTCTCTCCTCTCTTCCTC +
Preference number: 2 (lower is better)
Translates to: PEDSQGKGQEEYHTFHFLPALVG*VSPLFL
Trigger: GAGGAAGAGAGGAGAGACTCAACCAACTAGAGCAGG...TAGGAAGTGAAACGTATGATATTCTTCCTGGCCTTTGCCTTGAGAGTCTTCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329620.9
ENST00000412113.5
3UTR-3UTR TCA 90 bp CTCCAGAAGACTCTCAAGGCAAAGGCCAGGAAGAATATCATACGTTTCACTTCCTCAATGACTCTAAGCTaGGTCGTCCTCCTTATCCTG +
Preference number: 2 (lower is better)
Translates to: LQKTLKAKARKNIIRFTSSMTLS*VVLLIL
Trigger: CAGGATAAGGAGGACGACTCAGCTTAGAGTCATTGA...GGAAGTGAAACGTATGATATTCTTCCTGGCCTTTGCCTTGAGAGTCTTCTGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329620.9
ENST00000412113.5
3UTR-3UTR TCA 90 bp TGCACAGGAGAACATGGTGGAATTCCACCTTTAAGAAACTCGAACCTGCTACGCCATTCCAGCAGACACTaGAAAGCTGAACAAGGGAAA +
Preference number: 2 (lower is better)
Translates to: CTGEHGGIPPLRNSNLLRHSSRH*KAEQGK
Trigger: TTTCCCTTGTTCAGCTTTTCAGTGTCTGCTGGAATG...GCGTAGCAGGTTCGAGTTTCTTAAAGGTGGAATTCCACCATGTTCTCCTGTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329620.9
3UTR-3UTR CCA 90 bp TCTCAAGGCAAAGGCCAGGAAGAATATCATACGTTTCACTTCCTACCTGACAATAGCCTTTGGTTGTACTaGGGCAGTTTGGTGGACCAG +
Preference number: 2 (lower is better)
Translates to: SQGKGQEEYHTFHFLPDNSLWLY*GSLVDQ
Trigger: CTGGTCCACCAAACTGCCCCAGTACAACCAAAGGCT...ATTGTCAGGTAGGAAGTGAAACGTATGATATTCTTCCTGGCCTTTGCCTTGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329620.9
3UTR-3UTR TCA 90 bp GAACAAGGGAAACCTTATCCCTGCTCTAGTTGGTTGAGTCTCTCCTCTCTTCCTTACCTCTTTGCTTGGTaGGTCTTCAAGGTTTACATC +
Preference number: 2 (lower is better)
Translates to: EQGKPYPCSSWLSLSSLPYLFAW*VFKVYI
Trigger: GATGTAAACCTTGAAGACTCACCAAGCAAAGAGGTA...AGGAAGAGAGGAGAGACTCAACCAACTAGAGCAGGGATAAGGTTTCCCTTGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329620.9
ENST00000412113.5
ENST00000436265.5
ENST00000543212.5
3UTR-3UTR TCA 90 bp GGCTCCAGAAGACTCTCAAGGCAAAGGCCAGGAAGAATATCATACGTTTCACTTCATTCCAGCAGACACTaGAAAGCTGAACAAGGGAAA +
Preference number: 2 (lower is better)
Translates to: GSRRLSRQRPGRISYVSLHSSRH*KAEQGK
Trigger: TTTCCCTTGTTCAGCTTTTCAGTGTCTGCTGGAATG...AAGTGAAACGTATGATATTCTTCCTGGCCTTTGCCTTGAGAGTCTTCTGGAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329620.9
ENST00000412113.5
3UTR-3UTR TCA 90 bp ACCTCCATGTACCCAGCATCCAGCTCCAGTAACCATCAACGTGTACCATTATTTCATTCCAGCAGACACTaGAAAGCTGAACAAGGGAAA +
Preference number: 2 (lower is better)
Translates to: TSMYPASSSSNHQRVPLFHSSRH*KAEQGK
Trigger: TTTCCCTTGTTCAGCTTTTCAGTGTCTGCTGGAATG...AAATAATGGTACACGTTGATGGTTACTGGAGCTGGATGCTGGGTACATGGAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436265.5
3UTR-3UTR GCA 90 bp CACGTACTGACTTCCTTAAGAAAGGCTGTCCTTGAGAACATGGGAGCATCTGGTTTTAGGGTACCTCTTTaGTTGGTGAGTCTTCAAGGT +
Preference number: 2 (lower is better)
Translates to: HVLTSLRKAVLENMGASGFRVPL*LVSLQG
Trigger: ACCTTGAAGACTCACCAAGCAAAGAGGTACCCTAAA...ACCAGATGCTCCCATGTTCTCAAGGACAGCCTTTCTTAAGGAAGTCAGTACGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329620.9
ENST00000412113.5
ENST00000436265.5
ENST00000543212.5
3UTR-3UTR CCA 90 bp AAGCTTTTAGACTTGACGGGACTGCCAGGACTGGATAGTGGCTGTTTCAGAAGCTCTTATAGAACAAATTaGACTGAGCCTTTGGGGGAA +
Preference number: 2 (lower is better)
Translates to: KLLDLTGLPGLDSGCFRSSYRTN*TEPLGE
Trigger: TTCCCCCAAAGGCTCAGTCCAATTTGTTCTATAAGA...GCTTCTGAAACAGCCACTATCCAGTCCTGGCAGTCCCGTCAAGTCTAAAAGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329620.9
3UTR-3UTR TCA 90 bp CTCCAGAAGACTCTCAAGGCAAAGGCCAGGAAGAATATCATACGTTTCACTTCCTACCTCTTTGCTTGGTaGGTCTTCAAGGTTTACATC +
Preference number: 2 (lower is better)
Translates to: LQKTLKAKARKNIIRFTSYLFAW*VFKVYI
Trigger: GATGTAAACCTTGAAGACTCACCAAGCAAAGAGGTA...GGAAGTGAAACGTATGATATTCTTCCTGGCCTTTGCCTTGAGAGTCTTCTGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329620.9
ENST00000412113.5
3UTR-3UTR TCA 90 bp AAGGCAAAGGCCAGGAAGAATATCATACGTTTCACTTCCTACCTGACAATGAGGCAGACACTGAAAAGCTaGACAAGGGAAACCTTATCC +
Preference number: 2 (lower is better)
Translates to: KAKARKNIIRFTSYLTMRQTLKS*TRETLS
Trigger: GGATAAGGTTTCCCTTGTTCAGCTTTTCAGTGTCTG...CCTCATTGTCAGGTAGGAAGTGAAACGTATGATATTCTTCCTGGCCTTTGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329620.9
ENST00000412113.5
3UTR-3UTR GCA 90 bp CACATTCCAGCAGACACTGAAAAGCTGAACAAGGGAAACCTTATCCCTGCTCTATTTAGGGTACCTCTTTaGTTGGTGAGTCTTCAAGGT +
Preference number: 2 (lower is better)
Translates to: HIPADTEKLNKGNLIPALFRVPL*LVSLQG
Trigger: ACCTTGAAGACTCACCAAGCAAAGAGGTACCCTAAA...TAGAGCAGGGATAAGGTTTCCCTTGTTCAGCTTTTCAGTGTCTGCTGGAATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329620.9
ENST00000412113.5
ENST00000436265.5
ENST00000543212.5
3UTR-3UTR GCA 90 bp TCCAGTAACCATCAACGTGTACCATTATTTCATCTCTCTTCCTGCACATGCTCTGGGAAACCTTATCCCTaGTCTAGTTGGTTGAGTCTC +
Preference number: 2 (lower is better)
Translates to: SSNHQRVPLFHLSSCTCSGKPYP*SSWLSL
Trigger: GAGACTCAACCAACTAGAGCAGGGATAAGGTTTCCC...AGAGCATGTGCAGGAAGAGAGATGAAATAATGGTACACGTTGATGGTTACTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436265.5
3UTR-3UTR CCA 90 bp GAACAAGGGAAACCTTATCCCTGCTCTAGTTGGTTGAGTCTCTCCTCTCTTCCTGAACATGGGAGCATCTaGTTTCCTAATTTTCACAAT +
Preference number: 2 (lower is better)
Translates to: EQGKPYPCSSWLSLSSLPEHGSI*FPNFHN
Trigger: ATTGTGAAAATTAGGAAACCAGATGCTCCCATGTTC...AGGAAGAGAGGAGAGACTCAACCAACTAGAGCAGGGATAAGGTTTCCCTTGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329620.9
ENST00000412113.5
ENST00000436265.5
ENST00000543212.5
3UTR-3UTR TCA 90 bp TCCAGTAACCATCAACGTGTACCATTATTTCATCTCTCTTCCTGCACATGCTCTTACCTCTTTGCTTGGTaGGTCTTCAAGGTTTACATC +
Preference number: 2 (lower is better)
Translates to: SSNHQRVPLFHLSSCTCSYLFAW*VFKVYI
Trigger: GATGTAAACCTTGAAGACTCACCAAGCAAAGAGGTA...AGAGCATGTGCAGGAAGAGAGATGAAATAATGGTACACGTTGATGGTTACTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436265.5
3UTR-3UTR TCA 90 bp TCTGATGAGGCTGAAAATCACTATAGTATATGCTCCCTACAACTTGCTTTTCTCGGAAGACAGGAACCTTaGATGCGAGTGTGGAAAAAG +
Preference number: 2 (lower is better)
Translates to: SDEAENHYSICSLQLAFLGRQEP*MRVWKK
Trigger: CTTTTTCCACACTCGCATTCAAGGTTCCTGTCTTCC...GAGAAAAGCAAGTTGTAGGGAGCATATACTATAGTGATTTTCAGCCTCATCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328823.13
3UTR-3UTR GCA 90 bp GACCCCACCTCAAATCTACCTGGTACAAGTATAACTAACATGAAGAGCAGAAGATTTAGGGTACCTCTTTaGTTGGTGAGTCTTCAAGGT +
Preference number: 2 (lower is better)
Translates to: DPTSNLPGTSITNMKSRRFRVPL*LVSLQG
Trigger: ACCTTGAAGACTCACCAAGCAAAGAGGTACCCTAAA...TCTTCTGCTCTTCATGTTAGTTATACTTGTACCAGGTAGATTTGAGGTGGGGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329620.9
3UTR-3UTR CCA 90 bp TCTCAAGGCAAAGGCCAGGAAGAATATCATACGTTTCACTTCCTACCTGACAATTTGCACAGGAGAACATaGTGGAATTCCACCTTTAAG +
Preference number: 2 (lower is better)
Translates to: SQGKGQEEYHTFHFLPDNLHRRT*WNSTFK
Trigger: CTTAAAGGTGGAATTCCACCATGTTCTCCTGTGCAA...ATTGTCAGGTAGGAAGTGAAACGTATGATATTCTTCCTGGCCTTTGCCTTGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329620.9
3UTR-3UTR GCA 90 bp TCCCACATGCATCTTTGTGCACACATGCAAGTTTTCTCGCAGGCATATTTTAAATTTAGGGTACCTCTTTaGTTGGTGAGTCTTCAAGGT +
Preference number: 2 (lower is better)
Translates to: SHMHLCAHMQVFSQAYFKFRVPL*LVSLQG
Trigger: ACCTTGAAGACTCACCAAGCAAAGAGGTACCCTAAA...TTTAAAATATGCCTGCGAGAAAACTTGCATGTGTGCACAAAGATGCATGTGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328823.13
3UTR-3UTR GCA 90 bp ATCTTCCCACATGCATCTTTGTGCACACATGCAAGTTTTCTCGCAGGCATATTTTTTCTCATCTCAGGTTaGATTTCCCTAACACTAGTC +
Preference number: 2 (lower is better)
Translates to: IFPHASLCTHASFLAGIFFLISG*ISLTLV
Trigger: GACTAGTGTTAGGGAAATGCAACCTGAGATGAGAAA...AAATATGCCTGCGAGAAAACTTGCATGTGTGCACAAAGATGCATGTGGGAAGAT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000328823.13
3UTR-3UTR GCA 90 bp TCTCAAGGCAAAGGCCAGGAAGAATATCATACGTTTCACTTCCTACCTGACAATTTCTCAGCATCTTGGTaGCAAATAAAATCTGGATAC +
Preference number: 2 (lower is better)
Translates to: SQGKGQEEYHTFHFLPDNFSASW*QIKSGY
Trigger: GTATCCAGATTTTATTTGGCACCAAGATGCTGAGAA...ATTGTCAGGTAGGAAGTGAAACGTATGATATTCTTCCTGGCCTTTGCCTTGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329620.9
3UTR CAA 90 bp CTGTTTCAGAAGCAGTCTGATGACCAGAAGAAACTTCTCAGCATCTaGGTGCCAAATAAAATCTGGATACCTTTGCATAATCTTAGGATT +
Preference number: 2 (lower is better)
Translates to: LFQKQSDDQKKLLSI*VPNKIWIPLHNLRI
Trigger: AATCCTAAGATTATGCAAAGGTATCCAGATTTTATTTGGCACCAAGATGCTGAGAAGTTTCTTCTGGTCATCAGACTGCTTCTGAAACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329620.9
3UTR-3UTR TCA 90 bp TTCTCCTTATCAACAAGTCTTAGAAATTTCTGCATACGTAGTATGGGCATACCATACCTCTTTGCTTGGTaGGTCTTCAAGGTTTACATC +
Preference number: 2 (lower is better)
Translates to: FSLSTSLRNFCIRSMGIPYLFAW*VFKVYI
Trigger: GATGTAAACCTTGAAGACTCACCAAGCAAAGAGGTA...TGGTATGCCCATACTACGTATGCAGAAATTTCTAAGACTTGTTGATAAGGAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328823.13
3UTR-3UTR CCA 90 bp TCTGATGAGGCTGAAAATCACTATAGTATATGCTCCCTACAACTTGCTTTTCTCTTTTCAAACGTTTTCTaGCCATGCTATTGCCTTGGT +
Preference number: 2 (lower is better)
Translates to: SDEAENHYSICSLQLAFLFSNVF*PCYCLG
Trigger: ACCAAGGCAATAGCATGGCCAGAAAACGTTTGAAAA...GAGAAAAGCAAGTTGTAGGGAGCATATACTATAGTGATTTTCAGCCTCATCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000328823.13
3UTR-3UTR GCA 90 bp AGAAGGCTTTCTCTACCTCTAGACATAGTTTTCAACAGGTGTATAATACTCCATGACAGGAACCTTGAATaGGAGTGTGGAAAAAGTTAT +
Preference number: 2 (lower is better)
Translates to: RRLSLPLDIVFNRCIILHDRNLE*ECGKSY
Trigger: ATAACTTTTTCCACACTCGCATTCAAGGTTCCTGTC...ATGGAGTATTATACACCTGTTGAAAACTATGTCTAGAGGTAGAGAAAGCCTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328823.13
3UTR TCA 72 bp CTGAACAAGGGAAACCTTATCCCTGCTCTAGTTGGTTaGGTCTCTCCTCTCTTCCTCTCATCACTGTTGCCC +
Preference number: 3 (lower is better)
Translates to: LNKGNLIPALVG*VSPLFLSSLLP
Trigger: GGGCAACAGTGATGAGAGGAAGAGAGGAGAGACTCAACCAACTAGAGCAGGGATAAGGTTTCCCTTGTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329620.9
ENST00000412113.5
ENST00000436265.5
ENST00000543212.5
3UTR CCA 72 bp GTTCTATCCTTACACAGTCACAGCCTTTGGTTGTACTaGGGCAGTTTGGTGGACCAGGTAAACAGGTACCCT +
Preference number: 3 (lower is better)
Translates to: VLSLHSHSLWLY*GSLVDQVNRYP
Trigger: AGGGTACCTGTTTACCTGGTCCACCAAACTGCCCCAGTACAACCAAAGGCTGTGACTGTGTAAGGATAGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329620.9
3UTR CCA 72 bp CTCCACTTGGTTCTATCCTTACACAGTCACAGCCTTTaGTTGTACTGGGGCAGTTTGGTGGACCAGGTAAAC +
Preference number: 3 (lower is better)
Translates to: LHLVLSLHSHSL*LYWGSLVDQVN
Trigger: GTTTACCTGGTCCACCAAACTGCCCCAGTACAACCAAAGGCTGTGACTGTGTAAGGATAGAACCAAGTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329620.9
3UTR TCA 72 bp GGGAAGAGACAGGAAGAGCGGAATCCACCAGCACAGTaGGTGAGTCAGAAAGAAAGTACTCAAAACGTCAGT +
Preference number: 3 (lower is better)
Translates to: GKRQEERNPPAQ*VSQKESTQNVS
Trigger: ACTGACGTTTTGAGTACTTTCTTTCTGACTCACTCACTGTGCTGGTGGATTCCGCTCTTCCTGTCTCTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329620.9
3UTR TCA 72 bp TTAAGAGATAGAGGTGATGCAGACCAACAGCACAGCTaGGAGGGCAGAATCATCACATTCCAGCAGACACTG +
Preference number: 3 (lower is better)
Translates to: LRDRGDADQQHS*EGRIITFQQTL
Trigger: CAGTGTCTGCTGGAATGTGATGATTCTGCCCTCTCAGCTGTGCTGTTGGTCTGCATCACCTCTATCTCTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412113.5
3UTR-3UTR CAA 90 bp AAGGCAAAGGCCAGGAAGAATATCATACGTTTCACTTCCTACCTGACAATGAGGCCCTGCTCTAGTTGGTaGAGTCTCTCCTCTCTTCCT +
Preference number: 3 (lower is better)
Translates to: KAKARKNIIRFTSYLTMRPCSSW*SLSSLP
Trigger: AGGAAGAGAGGAGAGACTCAACCAACTAGAGCAGGG...CCTCATTGTCAGGTAGGAAGTGAAACGTATGATATTCTTCCTGGCCTTTGCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329620.9
ENST00000412113.5
3UTR-3UTR CAA 90 bp CATAATCTTAGGATTTGTGAGAAGCCCACCAACAAAGCAGATGGTGGTGGGGATACACAGTCACAGCCTTaGGTTGTACTGGGGCAGTTT +
Preference number: 3 (lower is better)
Translates to: HNLRICEKPTNKADGGGDTQSQP*VVLGQF
Trigger: AAACTGCCCCAGTACAACCAAAGGCTGTGACTGTGT...ATCCCCACCACCATCTGCTTTGTTGGTGGGCTTCTCACAAATCCTAAGATTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329620.9
3UTR-3UTR CAA 90 bp GAACAAGGGAAACCTTATCCCTGCTCTAGTTGGTTGAGTCTCTCCTCTCTTCCTAGGGTACCTCTTTGCTaGGTGAGTCTTCAAGGTTTA +
Preference number: 3 (lower is better)
Translates to: EQGKPYPCSSWLSLSSLPRVPLC*VSLQGL
Trigger: TAAACCTTGAAGACTCACCAAGCAAAGAGGTACCCT...AGGAAGAGAGGAGAGACTCAACCAACTAGAGCAGGGATAAGGTTTCCCTTGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329620.9
ENST00000412113.5
ENST00000436265.5
ENST00000543212.5
3UTR-3UTR CAA 90 bp CACGTACTGACTTCCTTAAGAAAGGCTGTCCTTGAGAACATGGGAGCATCTGGTAGGGTACCTCTTTGCTaGGTGAGTCTTCAAGGTTTA +
Preference number: 3 (lower is better)
Translates to: HVLTSLRKAVLENMGASGRVPLC*VSLQGL
Trigger: TAAACCTTGAAGACTCACCAAGCAAAGAGGTACCCT...ACCAGATGCTCCCATGTTCTCAAGGACAGCCTTTCTTAAGGAAGTCAGTACGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329620.9
ENST00000412113.5
ENST00000436265.5
ENST00000543212.5
3UTR-3UTR CAA 90 bp CCTTTGCATAATCTTAGGATTTGTGAGAAGCCCACCAACAAAGCAGATGGTGGTGTAAACAGGTACCCTTaGCACAGGAGAACATGGTGG +
Preference number: 3 (lower is better)
Translates to: PLHNLRICEKPTNKADGGVNRYP*HRRTWW
Trigger: CCACCATGTTCTCCTGTGCAAAGGGTACCTGTTTAC...ACCACCATCTGCTTTGTTGGTGGGCTTCTCACAAATCCTAAGATTATGCAAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329620.9
3UTR CCA 72 bp GACCAGGTAAACAGGTACCCTTTGCACAGGAGAACATaGTGGAATTCCACCTTTAAGAAACTCGAACCTGCT +
Preference number: 3 (lower is better)
Translates to: DQVNRYPLHRRT*WNSTFKKLEPA
Trigger: AGCAGGTTCGAGTTTCTTAAAGGTGGAATTCCACCATGTTCTCCTGTGCAAAGGGTACCTGTTTACCTGGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329620.9
3UTR-3UTR CAA 90 bp AAGGCTGTCCTTGAGAACATGGGAGCATCTGGTTTCCTAATTTTCACAATGCAGAGGGTACCTCTTTGCTaGGTGAGTCTTCAAGGTTTA +
Preference number: 3 (lower is better)
Translates to: KAVLENMGASGFLIFTMQRVPLC*VSLQGL
Trigger: TAAACCTTGAAGACTCACCAAGCAAAGAGGTACCCT...CTGCATTGTGAAAATTAGGAAACCAGATGCTCCCATGTTCTCAAGGACAGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329620.9
ENST00000412113.5
ENST00000436265.5
ENST00000543212.5
3UTR-3UTR CAA 90 bp ATAGAACAAATTGGACTGAGCCTTTGGGGGAAACAACTGTACCAGACAGTGGGACTAATCCCCAAATATTaGCCAGAGATCAGTTACTCG +
Preference number: 3 (lower is better)
Translates to: IEQIGLSLWGKQLYQTVGLIPKY*PEISYS
Trigger: CGAGTAACTGATCTCTGGCAAATATTTGGGGATTAG...TCCCACTGTCTGGTACAGTTGTTTCCCCCAAAGGCTCAGTCCAATTTGTTCTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329620.9
3UTR CCA 72 bp AAAGCTCTTCTTATAGAACAAATTGGACTGAGCCTTTaGGGGAAACAACTGTACCAGACAGTGGGAGCTAAC +
Preference number: 3 (lower is better)
Translates to: KALLIEQIGLSL*GKQLYQTVGAN
Trigger: GTTAGCTCCCACTGTCTGGTACAGTTGTTTCCCCCAAAGGCTCAGTCCAATTTGTTCTATAAGAAGAGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329620.9
3UTR-3UTR CAA 90 bp ACTATAGTATATGCTCCCTACAACTTGCTTTTCTCCTTATCAACAAGTCTTAGACCTTCCCCCATAAGATaGCCCTTCCAAAGGGTGGAA +
Preference number: 3 (lower is better)
Translates to: TIVYAPYNLLFSLSTSLRPSPIR*PFQRVE
Trigger: TTCCACCCTTTGGAAGGGCAATCTTATGGGGGAAGG...TCTAAGACTTGTTGATAAGGAGAAAAGCAAGTTGTAGGGAGCATATACTATAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328823.13
3UTR-3UTR CAA 90 bp AACATCTTTTCAAACGTTTTCTGGCCATGCTATTGCCTTGGTTATTCGGCAATTGGGAAGACAGGAACCTaGAATGCGAGTGTGGAAAAA +
Preference number: 3 (lower is better)
Translates to: NIFSNVFWPCYCLGYSAIGKTGT*NASVEK
Trigger: TTTTTCCACACTCGCATTCAAGGTTCCTGTCTTCCC...AATTGCCGAATAACCAAGGCAATAGCATGGCCAGAAAACGTTTGAAAAGATGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328823.13
3UTR-3UTR CAA 90 bp CATAATCTTAGGATTTGTGAGAAGCCCACCAACAAAGCAGATGGTGGTGGGGATATATTAATCTATGGATaGAAAAATCGGCCAGGCACA +
Preference number: 3 (lower is better)
Translates to: HNLRICEKPTNKADGGGDILIYG*KNRPGT
Trigger: TGTGCCTGGCCGATTTTTCAATCCATAGATTAATAT...ATCCCCACCACCATCTGCTTTGTTGGTGGGCTTCTCACAAATCCTAAGATTATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329620.9
3UTR GCA 72 bp CCTCCTTATCCTGACTTCAATTTTAGGGTACCTCTTTaGTTGGTGAGTCTTCAAGGTTTACATCTTAGAAGG +
Preference number: 3 (lower is better)
Translates to: PPYPDFNFRVPL*LVSLQGLHLRR
Trigger: CCTTCTAAGATGTAAACCTTGAAGACTCACCAAGCAAAGAGGTACCCTAAAATTGAAGTCAGGATAAGGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328823.13
ENST00000329620.9
ENST00000412113.5
ENST00000436265.5
ENST00000543212.5
3UTR-3UTR CAA 90 bp TCTCAAGGCAAAGGCCAGGAAGAATATCATACGTTTCACTTCCTACCTGACAATAAAAACCAGGGTCCTTaGAATATACAGGACACAAAG +
Preference number: 3 (lower is better)
Translates to: SQGKGQEEYHTFHFLPDNKNQGP*NIQDTK
Trigger: CTTTGTGTCCTGTATATTCAAAGGACCCTGGTTTTT...ATTGTCAGGTAGGAAGTGAAACGTATGATATTCTTCCTGGCCTTTGCCTTGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329620.9
3UTR TCA 72 bp GGATTTGTCCTCAGCAAAGCAAAAACCAGGGTCCTTTaGATATACAGGACACAAAGCTCTTCTTATAGAACA +
Preference number: 3 (lower is better)
Translates to: GFVLSKAKTRVL*IYRTQSSSYRT
Trigger: TGTTCTATAAGAAGAGCTTTGTGTCCTGTATATTCAAAGGACCCTGGTTTTTGCTTTGCTGAGGACAAATCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329620.9
3UTR CCA 72 bp ACACTAGTCAAGCTGAACATCTTTTCAAACGTTTTCTaGCCATGCTATTGCCTTGGTTATTCGGCAATTCAT +
Preference number: 3 (lower is better)
Translates to: TLVKLNIFSNVF*PCYCLGYSAIH
Trigger: ATGAATTGCCGAATAACCAAGGCAATAGCATGGCCAGAAAACGTTTGAAAAGATGTTCAGCTTGACTAGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328823.13
3UTR-3UTR CAA 90 bp ACTATAGTATATGCTCCCTACAACTTGCTTTTCTCCTTATCAACAAGTCTTAGAAGGGTACCTCTTTGCTaGGTGAGTCTTCAAGGTTTA +
Preference number: 3 (lower is better)
Translates to: TIVYAPYNLLFSLSTSLRRVPLC*VSLQGL
Trigger: TAAACCTTGAAGACTCACCAAGCAAAGAGGTACCCT...TCTAAGACTTGTTGATAAGGAGAAAAGCAAGTTGTAGGGAGCATATACTATAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328823.13
3UTR GCA 72 bp CTGAACATCTTTTCAAACGTTTTCTGGCCATGCTATTaGCTTGGTTATTCGGCAATTCATATTTCTGTCATT +
Preference number: 3 (lower is better)
Translates to: LNIFSNVFWPCY*LGYSAIHISVI
Trigger: AATGACAGAAATATGAATTGCCGAATAACCAAGGCAATAGCATGGCCAGAAAACGTTTGAAAAGATGTTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328823.13
3UTR GCA 72 bp AGTCTGATGACCAGAAGAAACTTCTCAGCATCTTGGTaGCAAATAAAATCTGGATACCTTTGCATAATCTTA +
Preference number: 3 (lower is better)
Translates to: SLMTRRNFSASW*QIKSGYLCIIL
Trigger: TAAGATTATGCAAAGGTATCCAGATTTTATTTGGCACCAAGATGCTGAGAAGTTTCTTCTGGTCATCAGACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329620.9
3UTR-3UTR CAA 90 bp TATGCTCCCTACAACTTGCTTTTCTCCTTATCAACAAGTCTTAGAAATTTCTGCTTTTATTTGTTGGTTTaGGTCTCCTCAAAGAAGGCT +
Preference number: 3 (lower is better)
Translates to: YAPYNLLFSLSTSLRNFCFYLLV*VSSKKA
Trigger: AGCCTTCTTTGAGGAGACCAAAACCAACAAATAAAA...GCAGAAATTTCTAAGACTTGTTGATAAGGAGAAAAGCAAGTTGTAGGGAGCATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328823.13
CDS-3UTR GCA 90 bp CTCCTCTCTTCCTCTCATCACTGTTGCCCACGTACTGACTTCCTTAAGAAAGGCGAAAGGGGCGGGACCTaGGCCGAGCTGTGGGGCGCG +
Preference number: 4 (lower is better)
Translates to: LLSSSHHCCPRTDFLKKGERGGT*AELWGA
Trigger: CGCGCCCCACAGCTCGGCGCAGGTCCCGCCCCTTTC...GCCTTTCTTAAGGAAGTCAGTACGTGGGCAACAGTGATGAGAGGAAGAGAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329620.9
ENST00000412113.5
CDS-3UTR TCA 90 bp GAGGAGCTGAGGAACTCAGCACATGAGTGCTCTCAGCATGCAGAAGGCTCAGCTGGGCAAAGGTTGCAGTaGGCCGAGATCGCGCCACTG +
Preference number: 4 (lower is better)
Translates to: EELRNSAHECSQHAEGSAGQRLQ*AEIAPL
Trigger: CAGTGGCGCGATCTCGGCTCACTGCAACCTTTGCCC...AGCTGAGCCTTCTGCATGCTGAGAGCACTCATGTGCTGAGTTCCTCAGCTCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329620.9
CDS-3UTR GCA 90 bp TTGTACTGGGGCAGTTTGGTGGACCAGGTAAACAGGTACCCTTTGCACAGGAGACCGAGATCGCGCCACTaGACTCCAGCCTGGGGGACA +
Preference number: 4 (lower is better)
Translates to: LYWGSLVDQVNRYPLHRRPRSRH*TPAWGT
Trigger: TGTCCCCCAGGCTGGAGTGCAGTGGCGCGATCTCGG...TCTCCTGTGCAAAGGGTACCTGTTTACCTGGTCCACCAAACTGCCCCAGTACAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329620.9
CDS-3UTR GCA 90 bp AAGGCAAAGGCCAGGAAGAATATCATACGTTTCACTTCCTACCTGACAATGAGGGAAAGGGGCGGGACCTaGGCCGAGCTGTGGGGCGCG +
Preference number: 4 (lower is better)
Translates to: KAKARKNIIRFTSYLTMRERGGT*AELWGA
Trigger: CGCGCCCCACAGCTCGGCGCAGGTCCCGCCCCTTTC...CCTCATTGTCAGGTAGGAAGTGAAACGTATGATATTCTTCCTGGCCTTTGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329620.9
ENST00000412113.5
CDS-3UTR CCA 90 bp CACGTACTGACTTCCTTAAGAAAGGCTGTCCTTGAGAACATGGGAGCATCTGGTACCTGCGCCGAGCTGTaGGGCGCGGTTCTGAAGGGG +
Preference number: 4 (lower is better)
Translates to: HVLTSLRKAVLENMGASGTCAEL*GAVLKG
Trigger: CCCCTTCAGAACCGCGCCCCACAGCTCGGCGCAGGT...ACCAGATGCTCCCATGTTCTCAAGGACAGCCTTTCTTAAGGAAGTCAGTACGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329620.9
ENST00000412113.5
CDS-3UTR GCA 90 bp CTCCTCTCTTCCTCTCATCACTGTTGCCCACGTACTGACTTCCTTAAGAAAGGCGATTCACCGCCATCTTaGTTCGGGCCTCCTGCCGCC +
Preference number: 4 (lower is better)
Translates to: LLSSSHHCCPRTDFLKKGDSPPS*FGPPAA
Trigger: GGCGGCAGGAGGCCCGAAGCAAGATGGCGGTGAATC...GCCTTTCTTAAGGAAGTCAGTACGTGGGCAACAGTGATGAGAGGAAGAGAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329620.9
ENST00000412113.5
ENST00000436265.5
CDS-3UTR GCA 90 bp AAATCCTCGGGCAGCAGCAGAGGCAGCTTTCACCATCAACTGGGCAAATTCAATGATTCACCGCCATCTTaGTTCGGGCCTCCTGCCGCC +
Preference number: 4 (lower is better)
Translates to: KSSGSSRGSFHHQLGKFNDSPPS*FGPPAA
Trigger: GGCGGCAGGAGGCCCGAAGCAAGATGGCGGTGAATC...ATTGAATTTGCCCAGTTGATGGTGAAAGCTGCCTCTGCTGCTGCCCGAGGATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445185.1
CDS-3UTR GCA 90 bp AAGCTTTTAGACTTGACGGGACTGCCAGGACTGGATAGTGGCTGTTTCAGAAGCTTGCTTCGGGCCTCCTaGCGCCCCGTAGATGGAAAG +
Preference number: 4 (lower is better)
Translates to: KLLDLTGLPGLDSGCFRSLLRAS*RPVDGK
Trigger: CTTTCCATCTACGGGGCGGCAGGAGGCCCGAAGCAA...GCTTCTGAAACAGCCACTATCCAGTCCTGGCAGTCCCGTCAAGTCTAAAAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329620.9
CDS-3UTR CCA 90 bp CCAGAAGACTCTCAAGGCAAAGGCCAGGAAGAATATCATACGTTTCACTTCCTAACCTGCGCCGAGCTGTaGGGCGCGGTTCTGAAGGGG +
Preference number: 4 (lower is better)
Translates to: PEDSQGKGQEEYHTFHFLTCAEL*GAVLKG
Trigger: CCCCTTCAGAACCGCGCCCCACAGCTCGGCGCAGGT...TAGGAAGTGAAACGTATGATATTCTTCCTGGCCTTTGCCTTGAGAGTCTTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329620.9
ENST00000412113.5
CDS-3UTR TCA 90 bp TCGGGCAGCAGCAGAGGCAGCTTTCACCATCAACTGGGCAAATTCAATGGCATCTTCTCGGTGTGGCTCTaGTTCACCGCCATCTTGCTT +
Preference number: 4 (lower is better)
Translates to: SGSSRGSFHHQLGKFNGIFSVWL*FTAILL
Trigger: AAGCAAGATGGCGGTGAATCAGAGCCACACCGAGAA...GATGCCATTGAATTTGCCCAGTTGATGGTGAAAGCTGCCTCTGCTGCTGCCCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445185.1
CDS-3UTR GCA 90 bp CACGTACTGACTTCCTTAAGAAAGGCTGTCCTTGAGAACATGGGAGCATCTGGTTTGCTTCGGGCCTCCTaGCGCCCCGTAGATGGAAAG +
Preference number: 4 (lower is better)
Translates to: HVLTSLRKAVLENMGASGLLRAS*RPVDGK
Trigger: CTTTCCATCTACGGGGCGGCAGGAGGCCCGAAGCAA...ACCAGATGCTCCCATGTTCTCAAGGACAGCCTTTCTTAAGGAAGTCAGTACGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329620.9
ENST00000412113.5
ENST00000436265.5
CDS-3UTR CCA 90 bp CACGTACTGACTTCCTTAAGAAAGGCTGTCCTTGAGAACATGGGAGCATCTGGTCCACGCAGCACCACGTaGGTCCAAACTGTGGCTCCA +
Preference number: 4 (lower is better)
Translates to: HVLTSLRKAVLENMGASGPRSTT*VQTVAP
Trigger: TGGAGCCACAGTTTGGACCCACGTGGTGCTGCGTGG...ACCAGATGCTCCCATGTTCTCAAGGACAGCCTTTCTTAAGGAAGTCAGTACGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329620.9
CDS-3UTR TCA 90 bp ATTCCAGCAGACACTGAAAAGCTGAACAAGGGAAACCTTATCCCTGCTCTAGTTTGTGGGGCGCGGTTCTaGAGGGGAGGGCGGAGATTA +
Preference number: 4 (lower is better)
Translates to: IPADTEKLNKGNLIPALVCGARF*RGGRRL
Trigger: TAATCTCCGCCCTCCCCTTCAGAACCGCGCCCCACA...AACTAGAGCAGGGATAAGGTTTCCCTTGTTCAGCTTTTCAGTGTCTGCTGGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329620.9
ENST00000412113.5
CDS-3UTR TCA 90 bp AAGGCAAAGGCCAGGAAGAATATCATACGTTTCACTTCCTACCTGACAATGAGGTGTGGGGCGCGGTTCTaGAGGGGAGGGCGGAGATTA +
Preference number: 4 (lower is better)
Translates to: KAKARKNIIRFTSYLTMRCGARF*RGGRRL
Trigger: TAATCTCCGCCCTCCCCTTCAGAACCGCGCCCCACA...CCTCATTGTCAGGTAGGAAGTGAAACGTATGATATTCTTCCTGGCCTTTGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329620.9
ENST00000412113.5
CDS-3UTR GCA 90 bp AAGGCAAAGGCCAGGAAGAATATCATACGTTTCACTTCCTACCTGACAATGAGGGATTCACCGCCATCTTaGTTCGGGCCTCCTGCCGCC +
Preference number: 4 (lower is better)
Translates to: KAKARKNIIRFTSYLTMRDSPPS*FGPPAA
Trigger: GGCGGCAGGAGGCCCGAAGCAAGATGGCGGTGAATC...CCTCATTGTCAGGTAGGAAGTGAAACGTATGATATTCTTCCTGGCCTTTGCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329620.9
ENST00000412113.5
CDS-3UTR GCA 90 bp CGTCCTCCTTATCCTGACTTCAATTTTAGGGTACCTCTTTGCTTGGTGAGTCTTGAGCCAGGAAGGTTCTaGTCCAGCAGGCTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: RPPYPDFNFRVPLCLVSLEPGRF*SSRLGS
Trigger: GCTCCCCAGCCTGCTGGAGCAGAACCTTCCTGGCTC...AAGACTCACCAAGCAAAGAGGTACCCTAAAATTGAAGTCAGGATAAGGAGGACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329620.9
CDS-3UTR GCA 90 bp CACATTCCAGCAGACACTGAAAAGCTGAACAAGGGAAACCTTATCCCTGCTCTACTGTGGGGCAAAGGTTaGAGTGAGCCGAGATCGCGC +
Preference number: 4 (lower is better)
Translates to: HIPADTEKLNKGNLIPALLWGKG*SEPRSR
Trigger: GCGCGATCTCGGCTCACTGCAACCTTTGCCCCACAG...TAGAGCAGGGATAAGGTTTCCCTTGTTCAGCTTTTCAGTGTCTGCTGGAATGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329620.9
CDS-3UTR GCA 90 bp GAACAAGGGAAACCTTATCCCTGCTCTAGTTGGTTGAGTCTCTCCTCTCTTCCTCAGTCCATGGTTGTCTaGCCCACCCTCTTCAGGCTC +
Preference number: 4 (lower is better)
Translates to: EQGKPYPCSSWLSLSSLPQSMVV*PTLFRL
Trigger: GAGCCTGAAGAGGGTGGGGCAGACAACCATGGACTG...AGGAAGAGAGGAGAGACTCAACCAACTAGAGCAGGGATAAGGTTTCCCTTGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329620.9
ENST00000412113.5
CDS-3UTR GCA 90 bp CTCTCCTCTCTTCCTCTCATCACTGTTGCCCACGTACTGACTTCCTTAAGAAAGCAGTCCATGGTTGTCTaGCCCACCCTCTTCAGGCTC +
Preference number: 4 (lower is better)
Translates to: LSSLPLITVAHVLTSLRKQSMVV*PTLFRL
Trigger: GAGCCTGAAGAGGGTGGGGCAGACAACCATGGACTG...CTTTCTTAAGGAAGTCAGTACGTGGGCAACAGTGATGAGAGGAAGAGAGGAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329620.9
ENST00000412113.5
CDS-3UTR TCA 90 bp CTCCAGCAGGCTGGGGAGCATCCACTTACCCATGAAAAGGAGTATTTGGAGGCTTCAATGACTCTAAGCTaGGTCGTCCTCCTTATCCTG +
Preference number: 4 (lower is better)
Translates to: LQQAGEHPLTHEKEYLEASMTLS*VVLLIL
Trigger: CAGGATAAGGAGGACGACTCAGCTTAGAGTCATTGA...AGCCTCCAAATACTCCTTTTCATGGGTAAGTGGATGCTCCCCAGCCTGCTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329620.9
CDS-3UTR GCA 90 bp CACGTACTGACTTCCTTAAGAAAGGCTGTCCTTGAGAACATGGGAGCATCTGGTTTCAGGAGCCTGGGCTaGTGTAGATTCCTGAGGCCT +
Preference number: 4 (lower is better)
Translates to: HVLTSLRKAVLENMGASGFRSLG*CRFLRP
Trigger: AGGCCTCAGGAATCTACAGCAGCCCAGGCTCCTGAA...ACCAGATGCTCCCATGTTCTCAAGGACAGCCTTTCTTAAGGAAGTCAGTACGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329620.9
ENST00000412113.5
ENST00000436265.5
ENST00000543212.5
3UTR CAA 72 bp TTACACAGTCACAGCCTTTGGTTGTACTGGGGCAGTTaGGTGGACCAGGTAAACAGGTACCCTTTGCACAGG +
Preference number: 4 (lower is better)
Translates to: LHSHSLWLYWGS*VDQVNRYPLHR
Trigger: CCTGTGCAAAGGGTACCTGTTTACCTGGTCCACCAAACTGCCCCAGTACAACCAAAGGCTGTGACTGTGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329620.9
CDS-3UTR TCA 90 bp TGCACAGGAGAACATGGTGGAATTCCACCTTTAAGAAACTCGAACCTGCTACGCTTCTCGGTGTGGCTCTaGTTCACCGCCATCTTGCTT +
Preference number: 4 (lower is better)
Translates to: CTGEHGGIPPLRNSNLLRFSVWL*FTAILL
Trigger: AAGCAAGATGGCGGTGAATCAGAGCCACACCGAGAA...GCGTAGCAGGTTCGAGTTTCTTAAAGGTGGAATTCCACCATGTTCTCCTGTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329620.9
CDS-3UTR TCA 90 bp GGCTCCAGAAGACTCTCAAGGCAAAGGCCAGGAAGAATATCATACGTTTCACTTTCCATATCGCACAGGTaGGGCTCTGTATCCCACAGG +
Preference number: 4 (lower is better)
Translates to: GSRRLSRQRPGRISYVSLSISHR*GSVSHR
Trigger: CCTGTGGGATACAGAGCCTCACCTGTGCGATATGGA...AAGTGAAACGTATGATATTCTTCCTGGCCTTTGCCTTGAGAGTCTTCTGGAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329620.9
ENST00000412113.5
CDS-3UTR TCA 90 bp AAGGCTGTCCTTGAGAACATGGGAGCATCTGGTTTCCTAATTTTCACAATGCAGGCTGCTGTAGATTCCTaGGGCCTGGCTCCTGATCCA +
Preference number: 4 (lower is better)
Translates to: KAVLENMGASGFLIFTMQAAVDS*GLAPDP
Trigger: TGGATCAGGAGCCAGGCCTCAGGAATCTACAGCAGC...CTGCATTGTGAAAATTAGGAAACCAGATGCTCCCATGTTCTCAAGGACAGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329620.9
ENST00000412113.5
ENST00000436265.5
ENST00000543212.5
CDS-3UTR TCA 90 bp CGTCCTCCTTATCCTGACTTCAATTTTAGGGTACCTCTTTGCTTGGTGAGTCTTGCTGCTGTAGATTCCTaGGGCCTGGCTCCTGATCCA +
Preference number: 4 (lower is better)
Translates to: RPPYPDFNFRVPLCLVSLAAVDS*GLAPDP
Trigger: TGGATCAGGAGCCAGGCCTCAGGAATCTACAGCAGC...AAGACTCACCAAGCAAAGAGGTACCCTAAAATTGAAGTCAGGATAAGGAGGACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328823.13
ENST00000329620.9
ENST00000412113.5
ENST00000436265.5
ENST00000543212.5
CDS-3UTR TCA 90 bp GAACAAGGGAAACCTTATCCCTGCTCTAGTTGGTTGAGTCTCTCCTCTCTTCCTGAGGAACTCAGCACATaGGTGCTCTCAGCATGCAGA +
Preference number: 4 (lower is better)
Translates to: EQGKPYPCSSWLSLSSLPEELST*VLSACR
Trigger: TCTGCATGCTGAGAGCACTCATGTGCTGAGTTCCTC...AGGAAGAGAGGAGAGACTCAACCAACTAGAGCAGGGATAAGGTTTCCCTTGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329620.9
CDS-3UTR TCA 90 bp CACGTACTGACTTCCTTAAGAAAGGCTGTCCTTGAGAACATGGGAGCATCTGGTATATCTCAGGGTAGCTaGGCCAGGAAGGTTCTGCTC +
Preference number: 4 (lower is better)
Translates to: HVLTSLRKAVLENMGASGISQGS*ARKVLL
Trigger: GAGCAGAACCTTCCTGGCTCAGCTACCCTGAGATAT...ACCAGATGCTCCCATGTTCTCAAGGACAGCCTTTCTTAAGGAAGTCAGTACGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329620.9
CDS-3UTR GCA 90 bp TTAAGAAAGGCTGTCCTTGAGAACATGGGAGCATCTGGTTTCCTAATTTTCACAGATTCACCGCCATCTTaGTTCGGGCCTCCTGCCGCC +
Preference number: 4 (lower is better)
Translates to: LRKAVLENMGASGFLIFTDSPPS*FGPPAA
Trigger: GGCGGCAGGAGGCCCGAAGCAAGATGGCGGTGAATC...TGTGAAAATTAGGAAACCAGATGCTCCCATGTTCTCAAGGACAGCCTTTCTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329620.9
ENST00000412113.5
ENST00000436265.5
CDS-3UTR GCA 90 bp CTCCTCTCTTCCTCTCATCACTGTTGCCCACGTACTGACTTCCTTAAGAAAGGCAAGGCATCTGTGGAGTaGACATATTCCCTTCCCCAG +
Preference number: 4 (lower is better)
Translates to: LLSSSHHCCPRTDFLKKGKASVE*TYSLPQ
Trigger: CTGGGGAAGGGAATATGTGCACTCCACAGATGCCTT...GCCTTTCTTAAGGAAGTCAGTACGTGGGCAACAGTGATGAGAGGAAGAGAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329620.9
ENST00000436265.5
ENST00000543212.5
CDS-3UTR CCA 90 bp TCATTTAAGGTTCTAAGTGGAAATCCTCGGGCAGCAGCAGAGGCAGCTTTCACCTTCCCAGCCACCATATaGAGCTGCCTGAATAGTTCC +
Preference number: 4 (lower is better)
Translates to: SFKVLSGNPRAAAEAAFTFPATI*SCLNSS
Trigger: GGAACTATTCAGGCAGCTCCATATGGTGGCTGGGAA...GGTGAAAGCTGCCTCTGCTGCTGCCCGAGGATTTCCACTTAGAACCTTAAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445185.1
CDS-3UTR CCA 90 bp TGCACAGGAGAACATGGTGGAATTCCACCTTTAAGAAACTCGAACCTGCTACGCAGCCTTTGGTTGTACTaGGGCAGTTTGGTGGACCAG +
Preference number: 4 (lower is better)
Translates to: CTGEHGGIPPLRNSNLLRSLWLY*GSLVDQ
Trigger: CTGGTCCACCAAACTGCCCCAGTACAACCAAAGGCT...GCGTAGCAGGTTCGAGTTTCTTAAAGGTGGAATTCCACCATGTTCTCCTGTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329620.9
3UTR CAA 72 bp GCTGAACAAGGGAAACCTTATCCCTGCTCTAGTTGGTaGAGTCTCTCCTCTCTTCCTCTCATCACTGTTGCC +
Preference number: 4 (lower is better)
Translates to: AEQGKPYPCSSW*SLSSLPLITVA
Trigger: GGCAACAGTGATGAGAGGAAGAGAGGAGAGACTCAACCAACTAGAGCAGGGATAAGGTTTCCCTTGTTCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329620.9
ENST00000412113.5
ENST00000436265.5
ENST00000543212.5
3UTR CAA 72 bp TGGGGCAGTTTGGTGGACCAGGTAAACAGGTACCCTTaGCACAGGAGAACATGGTGGAATTCCACCTTTAAG +
Preference number: 4 (lower is better)
Translates to: WGSLVDQVNRYP*HRRTWWNSTFK
Trigger: CTTAAAGGTGGAATTCCACCATGTTCTCCTGTGCAAAGGGTACCTGTTTACCTGGTCCACCAAACTGCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329620.9
3UTR CAA 72 bp CACTTGGTTCTATCCTTACACAGTCACAGCCTTTGGTaGTACTGGGGCAGTTTGGTGGACCAGGTAAACAGG +
Preference number: 4 (lower is better)
Translates to: HLVLSLHSHSLW*YWGSLVDQVNR
Trigger: CCTGTTTACCTGGTCCACCAAACTGCCCCAGTACAACCAAAGGCTGTGACTGTGTAAGGATAGAACCAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329620.9
3UTR CAA 72 bp GCTCCACTTGGTTCTATCCTTACACAGTCACAGCCTTaGGTTGTACTGGGGCAGTTTGGTGGACCAGGTAAA +
Preference number: 4 (lower is better)
Translates to: APLGSILTQSQP*VVLGQFGGPGK
Trigger: TTTACCTGGTCCACCAAACTGCCCCAGTACAACCAAAGGCTGTGACTGTGTAAGGATAGAACCAAGTGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329620.9
CDS-3UTR TCA 90 bp ATCTTCCCACATGCATCTTTGTGCACACATGCAAGTTTTCTCGCAGGCATATTTGCTGCTGTAGATTCCTaGGGCCTGGCTCCTGATCCA +
Preference number: 4 (lower is better)
Translates to: IFPHASLCTHASFLAGIFAAVDS*GLAPDP
Trigger: TGGATCAGGAGCCAGGCCTCAGGAATCTACAGCAGC...AAATATGCCTGCGAGAAAACTTGCATGTGTGCACAAAGATGCATGTGGGAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328823.13
CDS-3UTR TCA 90 bp TCCAGTAACCATCAACGTGTACCATTATTTCATCTCTCTTCCTGCACATGCTCTGCTGCTGTAGATTCCTaGGGCCTGGCTCCTGATCCA +
Preference number: 4 (lower is better)
Translates to: SSNHQRVPLFHLSSCTCSAAVDS*GLAPDP
Trigger: TGGATCAGGAGCCAGGCCTCAGGAATCTACAGCAGC...AGAGCATGTGCAGGAAGAGAGATGAAATAATGGTACACGTTGATGGTTACTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436265.5
CDS-3UTR TCA 90 bp CTCCTCTCTTCCTCTCATCACTGTTGCCCACGTACTGACTTCCTTAAGAAAGGCGCATCCACTTACCCATaGAAAGGAGTATTTGGAGGC +
Preference number: 4 (lower is better)
Translates to: LLSSSHHCCPRTDFLKKGASTYP*KGVFGG
Trigger: GCCTCCAAATACTCCTTTTCATGGGTAAGTGGATGC...GCCTTTCTTAAGGAAGTCAGTACGTGGGCAACAGTGATGAGAGGAAGAGAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329620.9
CDS-3UTR TCA 90 bp GGCTCCAGAAGACTCTCAAGGCAAAGGCCAGGAAGAATATCATACGTTTCACTTGACCAACAGCACAGCTaGGAGGGCAGAATCATCACA +
Preference number: 4 (lower is better)
Translates to: GSRRLSRQRPGRISYVSLDQQHS*EGRIIT
Trigger: TGTGATGATTCTGCCCTCTCAGCTGTGCTGTTGGTC...AAGTGAAACGTATGATATTCTTCCTGGCCTTTGCCTTGAGAGTCTTCTGGAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412113.5
CDS-3UTR GCA 90 bp CCCATAGAGCTGAACCAGTCATTTAAGGTTCTAAGTGGAAATCCTCGGGCAGCAAAGGCATCTGTGGAGTaGACATATTCCCTTCCCCAG +
Preference number: 4 (lower is better)
Translates to: PIELNQSFKVLSGNPRAAKASVE*TYSLPQ
Trigger: CTGGGGAAGGGAATATGTGCACTCCACAGATGCCTT...TGCTGCCCGAGGATTTCCACTTAGAACCTTAAATGACTGGTTCAGCTCTATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445185.1
CDS-3UTR GCA 90 bp CGTCCTCCTTATCCTGACTTCAATTTTAGGGTACCTCTTTGCTTGGTGAGTCTTTTCAGGAGCCTGGGCTaGTGTAGATTCCTGAGGCCT +
Preference number: 4 (lower is better)
Translates to: RPPYPDFNFRVPLCLVSLFRSLG*CRFLRP
Trigger: AGGCCTCAGGAATCTACAGCAGCCCAGGCTCCTGAA...AAGACTCACCAAGCAAAGAGGTACCCTAAAATTGAAGTCAGGATAAGGAGGACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000328823.13
ENST00000329620.9
ENST00000412113.5
ENST00000436265.5
ENST00000543212.5
CDS-3UTR GCA 90 bp CATCCAGCTCCAGTAACCATCAACGTGTACCATTATTTCATCTCTCTTCCTGCATTCAGGAGCCTGGGCTaGTGTAGATTCCTGAGGCCT +
Preference number: 4 (lower is better)
Translates to: HPAPVTINVYHYFISLPAFRSLG*CRFLRP
Trigger: AGGCCTCAGGAATCTACAGCAGCCCAGGCTCCTGAA...TGCAGGAAGAGAGATGAAATAATGGTACACGTTGATGGTTACTGGAGCTGGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436265.5
CDS-3UTR CCA 90 bp CACGTACTGACTTCCTTAAGAAAGGCTGTCCTTGAGAACATGGGAGCATCTGGTTTCCCAGCCACCATATaGAGCTGCCTGAATAGTTCC +
Preference number: 4 (lower is better)
Translates to: HVLTSLRKAVLENMGASGFPATI*SCLNSS
Trigger: GGAACTATTCAGGCAGCTCCATATGGTGGCTGGGAA...ACCAGATGCTCCCATGTTCTCAAGGACAGCCTTTCTTAAGGAAGTCAGTACGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329620.9
ENST00000412113.5
ENST00000436265.5
ENST00000543212.5
CDS-3UTR CCA 90 bp GGCTCCAGAAGACTCTCAAGGCAAAGGCCAGGAAGAATATCATACGTTTCACTTATTAGCCGAGCATGGTaGCAGGCACCTGTCATCCAA +
Preference number: 4 (lower is better)
Translates to: GSRRLSRQRPGRISYVSLISRAW*QAPVIQ
Trigger: TTGGATGACAGGTGCCTGCCACCATGCTCGGCTAAT...AAGTGAAACGTATGATATTCTTCCTGGCCTTTGCCTTGAGAGTCTTCTGGAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329620.9
CDS-3UTR CCA 90 bp GGCTCCAGAAGACTCTCAAGGCAAAGGCCAGGAAGAATATCATACGTTTCACTTCCCTACCTAAGATTCTaGGGTCCCAAGGCAACAAGC +
Preference number: 4 (lower is better)
Translates to: GSRRLSRQRPGRISYVSLPYLRF*GPKATS
Trigger: GCTTGTTGCCTTGGGACCCCAGAATCTTAGGTAGGG...AAGTGAAACGTATGATATTCTTCCTGGCCTTTGCCTTGAGAGTCTTCTGGAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329620.9
CDS-3UTR CCA 90 bp CACATTCCAGCAGACACTGAAAAGCTGAACAAGGGAAACCTTATCCCTGCTCTATTCTCTAGCAGTCCATaGTTGTCTGCCCCACCCTCT +
Preference number: 4 (lower is better)
Translates to: HIPADTEKLNKGNLIPALFSSSP*LSAPPS
Trigger: AGAGGGTGGGGCAGACAACCATGGACTGCTAGAGAA...TAGAGCAGGGATAAGGTTTCCCTTGTTCAGCTTTTCAGTGTCTGCTGGAATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329620.9
ENST00000412113.5
CDS-3UTR TCA 90 bp TCCAGTAACCATCAACGTGTACCATTATTTCATCTCTCTTCCTGCACATGCTCTTCCATATCGCACAGGTaGGGCTCTGTATCCCACAGG +
Preference number: 4 (lower is better)
Translates to: SSNHQRVPLFHLSSCTCSSISHR*GSVSHR
Trigger: CCTGTGGGATACAGAGCCTCACCTGTGCGATATGGA...AGAGCATGTGCAGGAAGAGAGATGAAATAATGGTACACGTTGATGGTTACTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436265.5
CDS-3UTR TCA 90 bp TTAAGAAAGGCTGTCCTTGAGAACATGGGAGCATCTGGTTTCCTAATTTTCACAGCTGCTGTAGATTCCTaGGGCCTGGCTCCTGATCCA +
Preference number: 4 (lower is better)
Translates to: LRKAVLENMGASGFLIFTAAVDS*GLAPDP
Trigger: TGGATCAGGAGCCAGGCCTCAGGAATCTACAGCAGC...TGTGAAAATTAGGAAACCAGATGCTCCCATGTTCTCAAGGACAGCCTTTCTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329620.9
ENST00000412113.5
ENST00000436265.5
ENST00000543212.5
CDS-3UTR TCA 90 bp GAACAAGGGAAACCTTATCCCTGCTCTAGTTGGTTGAGTCTCTCCTCTCTTCCTTCAATGACTCTAAGCTaGGTCGTCCTCCTTATCCTG +
Preference number: 4 (lower is better)
Translates to: EQGKPYPCSSWLSLSSLPSMTLS*VVLLIL
Trigger: CAGGATAAGGAGGACGACTCAGCTTAGAGTCATTGA...AGGAAGAGAGGAGAGACTCAACCAACTAGAGCAGGGATAAGGTTTCCCTTGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329620.9
ENST00000412113.5
ENST00000436265.5
ENST00000543212.5
CDS-3UTR TCA 90 bp CTCCAGAAGACTCTCAAGGCAAAGGCCAGGAAGAATATCATACGTTTCACTTCCAAGAAAGGCTGTCCTTaGGAACATGGGAGCATCTGG +
Preference number: 4 (lower is better)
Translates to: LQKTLKAKARKNIIRFTSKKGCP*EHGSIW
Trigger: CCAGATGCTCCCATGTTCTCAAGGACAGCCTTTCTT...GGAAGTGAAACGTATGATATTCTTCCTGGCCTTTGCCTTGAGAGTCTTCTGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329620.9
ENST00000412113.5
CDS-3UTR TCA 90 bp CGTCCTCCTTATCCTGACTTCAATTTTAGGGTACCTCTTTGCTTGGTGAGTCTTCCTGCTCTAGTTGGTTaGGTCTCTCCTCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: RPPYPDFNFRVPLCLVSLPALVG*VSPLFL
Trigger: GAGGAAGAGAGGAGAGACTCAACCAACTAGAGCAGG...AAGACTCACCAAGCAAAGAGGTACCCTAAAATTGAAGTCAGGATAAGGAGGACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329620.9
ENST00000412113.5
ENST00000436265.5
ENST00000543212.5
CDS-3UTR TCA 90 bp ACCCAGCATCCAGCTCCAGTAACCATCAACGTGTACCATTATTTCATCTCTCTTCCTGCTCTAGTTGGTTaGGTCTCTCCTCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: TQHPAPVTINVYHYFISLPALVG*VSPLFL
Trigger: GAGGAAGAGAGGAGAGACTCAACCAACTAGAGCAGG...AAGAGAGATGAAATAATGGTACACGTTGATGGTTACTGGAGCTGGATGCTGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436265.5
CDS-3UTR TCA 90 bp GGCTCCAGAAGACTCTCAAGGCAAAGGCCAGGAAGAATATCATACGTTTCACTTGGCTCAGCTGAATTCTaGCTGGATTTGTCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: GSRRLSRQRPGRISYVSLGSAEF*LDLSSA
Trigger: TGCTGAGGACAAATCCAGTCAGAATTCAGCTGAGCC...AAGTGAAACGTATGATATTCTTCCTGGCCTTTGCCTTGAGAGTCTTCTGGAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329620.9
CDS-3UTR TCA 90 bp CCTCAGCAAAGCAAAAACCAGGGTCCTTTGAATATACAGGACACAAAGCTCTTCACGTCAGTGAGGAGCTaGGGAACTCAGCACATGAGT +
Preference number: 4 (lower is better)
Translates to: PQQSKNQGPLNIQDTKLFTSVRS*GTQHMS
Trigger: ACTCATGTGCTGAGTTCCTCAGCTCCTCACTGACGT...GAAGAGCTTTGTGTCCTGTATATTCAAAGGACCCTGGTTTTTGCTTTGCTGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329620.9
CDS-3UTR TCA 90 bp CCAGAAGACTCTCAAGGCAAAGGCCAGGAAGAATATCATACGTTTCACTTCCTAACAGAGTTGGATCTCTaGCACCCTGGTTCTAAGCCC +
Preference number: 4 (lower is better)
Translates to: PEDSQGKGQEEYHTFHFLTELDL*HPGSKP
Trigger: GGGCTTAGAACCAGGGTGTCAGAGATCCAACTCTGT...TAGGAAGTGAAACGTATGATATTCTTCCTGGCCTTTGCCTTGAGAGTCTTCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329620.9
CDS-3UTR TCA 90 bp TCGGGCAGCAGCAGAGGCAGCTTTCACCATCAACTGGGCAAATTCAATGGCATCAATACCGGTATGAAGTaGGAAACAATGTTCCTGTCT +
Preference number: 4 (lower is better)
Translates to: SGSSRGSFHHQLGKFNGINTGMK*ETMFLS
Trigger: AGACAGGAACATTGTTTCTCACTTCATACCGGTATT...GATGCCATTGAATTTGCCCAGTTGATGGTGAAAGCTGCCTCTGCTGCTGCCCGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445185.1
CDS-3UTR GCA 90 bp AATATAATGAAATCTTCCCACATGCATCTTTGTGCACACATGCAAGTTTTCTCGGATTCACCGCCATCTTaGTTCGGGCCTCCTGCCGCC +
Preference number: 4 (lower is better)
Translates to: NIMKSSHMHLCAHMQVFSDSPPS*FGPPAA
Trigger: GGCGGCAGGAGGCCCGAAGCAAGATGGCGGTGAATC...CGAGAAAACTTGCATGTGTGCACAAAGATGCATGTGGGAAGATTTCATTATATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328823.13
CDS-3UTR GCA 90 bp TTTAAGGTTCTAAGTGGAAATCCTCGGGCAGCAGCAGAGGCAGCTTTCACCATCGCCACCATATGGAGCTaGCTGAATAGTTCCCTTAAT +
Preference number: 4 (lower is better)
Translates to: FKVLSGNPRAAAEAAFTIATIWS*LNSSLN
Trigger: ATTAAGGGAACTATTCAGGCAGCTCCATATGGTGGC...GATGGTGAAAGCTGCCTCTGCTGCTGCCCGAGGATTTCCACTTAGAACCTTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445185.1
CDS-3UTR GCA 90 bp CTCTCCTCTCTTCCTCTCATCACTGTTGCCCACGTACTGACTTCCTTAAGAAAGGGGAAACCTTATCCCTaGTCTAGTTGGTTGAGTCTC +
Preference number: 4 (lower is better)
Translates to: LSSLPLITVAHVLTSLRKGKPYP*SSWLSL
Trigger: GAGACTCAACCAACTAGAGCAGGGATAAGGTTTCCC...CTTTCTTAAGGAAGTCAGTACGTGGGCAACAGTGATGAGAGGAAGAGAGGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329620.9
ENST00000412113.5
ENST00000436265.5
ENST00000543212.5
CDS-3UTR CCA 90 bp GAGGTGATGCAGACCAACAGCACAGCTGAGAGGGCAGAATCATCACATTCCAGCGTTTGCAGCAAATACTaGTTGTTCAACAGTGAGGTT +
Preference number: 4 (lower is better)
Translates to: EVMQTNSTAERAESSHSSVCSKY*LFNSEV
Trigger: AACCTCACTGTTGAACAACCAGTATTTGCTGCAAAC...GCTGGAATGTGATGATTCTGCCCTCTCAGCTGTGCTGTTGGTCTGCATCACCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412113.5
CDS-3UTR CCA 90 bp CTCCAGAAGACTCTCAAGGCAAAGGCCAGGAAGAATATCATACGTTTCACTTCCTTCCCAGCCACCATATaGAGCTGCCTGAATAGTTCC +
Preference number: 4 (lower is better)
Translates to: LQKTLKAKARKNIIRFTSFPATI*SCLNSS
Trigger: GGAACTATTCAGGCAGCTCCATATGGTGGCTGGGAA...GGAAGTGAAACGTATGATATTCTTCCTGGCCTTTGCCTTGAGAGTCTTCTGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329620.9
ENST00000412113.5
CDS-3UTR CCA 90 bp CTGAGTCGTCCTCCTTATCCTGACTTCAATTTTAGGGTACCTCTTTGCTTGGTGTTCCCAGCCACCATATaGAGCTGCCTGAATAGTTCC +
Preference number: 4 (lower is better)
Translates to: LSRPPYPDFNFRVPLCLVFPATI*SCLNSS
Trigger: GGAACTATTCAGGCAGCTCCATATGGTGGCTGGGAA...CACCAAGCAAAGAGGTACCCTAAAATTGAAGTCAGGATAAGGAGGACGACTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328823.13
ENST00000329620.9
ENST00000412113.5
ENST00000436265.5
ENST00000543212.5
CDS-3UTR CCA 90 bp CTCCAGAAGACTCTCAAGGCAAAGGCCAGGAAGAATATCATACGTTTCACTTCCCACAGTCACAGCCTTTaGTTGTACTGGGGCAGTTTG +
Preference number: 4 (lower is better)
Translates to: LQKTLKAKARKNIIRFTSHSHSL*LYWGSL
Trigger: CAAACTGCCCCAGTACAACCAAAGGCTGTGACTGTG...GGAAGTGAAACGTATGATATTCTTCCTGGCCTTTGCCTTGAGAGTCTTCTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329620.9
CDS-3UTR CCA 90 bp CATAATCTTAGGATTTGTGAGAAGCCCACCAACAAAGCAGATGGTGGTGGGGATAAAATTAGCCGAGCATaGTGGCAGGCACCTGTCATC +
Preference number: 4 (lower is better)
Translates to: HNLRICEKPTNKADGGGDKISRA*WQAPVI
Trigger: GATGACAGGTGCCTGCCACCATGCTCGGCTAATTTT...ATCCCCACCACCATCTGCTTTGTTGGTGGGCTTCTCACAAATCCTAAGATTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329620.9
CDS-3UTR TCA 90 bp TGGAACAACTACCTGCGAGAAGCCTGTGATCACATACCTGAGTCGTCCTCCTTAGAAAATCACCCGGTATaGAGTGAGAAACAATGTTCC +
Preference number: 4 (lower is better)
Translates to: WNNYLREACDHIPESSSLENHPV*SEKQCS
Trigger: GGAACATTGTTTCTCACTTCATACCGGGTGATTTTC...TAAGGAGGACGACTCAGGTATGTGATCACAGGCTTCTCGCAGGTAGTTGTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328823.13
CDS-3UTR TCA 90 bp GGGAGCATCTGGTTTCCTAATTTTCACAATGCAGATCAATCAATGACTCTAAGCTCCATATCGCACAGGTaGGGCTCTGTATCCCACAGG +
Preference number: 4 (lower is better)
Translates to: GSIWFPNFHNADQSMTLSSISHR*GSVSHR
Trigger: CCTGTGGGATACAGAGCCTCACCTGTGCGATATGGA...GCTTAGAGTCATTGATTGATCTGCATTGTGAAAATTAGGAAACCAGATGCTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329620.9
ENST00000412113.5
ENST00000436265.5
ENST00000543212.5
CDS-3UTR TCA 90 bp ATTCCAGCAGACACTGAAAAGCTGAACAAGGGAAACCTTATCCCTGCTCTAGTTAAGAAAGGCTGTCCTTaGGAACATGGGAGCATCTGG +
Preference number: 4 (lower is better)
Translates to: IPADTEKLNKGNLIPALVKKGCP*EHGSIW
Trigger: CCAGATGCTCCCATGTTCTCAAGGACAGCCTTTCTT...AACTAGAGCAGGGATAAGGTTTCCCTTGTTCAGCTTTTCAGTGTCTGCTGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329620.9
ENST00000412113.5
ENST00000436265.5
ENST00000543212.5
CDS-3UTR TCA 90 bp AGCCCACCAACAAAGCAGATGGTGGTGGGGATCTTGGTAACAGAAATAAATTTACCTGCTCTAGTTGGTTaGGTCTCTCCTCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: SPPTKQMVVGILVTEINLPALVG*VSPLFL
Trigger: GAGGAAGAGAGGAGAGACTCAACCAACTAGAGCAGG...TAAATTTATTTCTGTTACCAAGATCCCCACCACCATCTGCTTTGTTGGTGGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329620.9
CDS-3UTR TCA 90 bp TTAGGATTTGTGAGAAGCCCACCAACAAAGCAGATGGTGGTGGGGATCTTGGTACAGACACTGAAAAGCTaGACAAGGGAAACCTTATCC +
Preference number: 4 (lower is better)
Translates to: LGFVRSPPTKQMVVGILVQTLKS*TRETLS
Trigger: GGATAAGGTTTCCCTTGTTCAGCTTTTCAGTGTCTG...TACCAAGATCCCCACCACCATCTGCTTTGTTGGTGGGCTTCTCACAAATCCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329620.9
CDS-3UTR TCA 90 bp CTCTCCTCTCTTCCTCTCATCACTGTTGCCCACGTACTGACTTCCTTAAGAAAGCATTCCAGCAGACACTaGAAAGCTGAACAAGGGAAA +
Preference number: 4 (lower is better)
Translates to: LSSLPLITVAHVLTSLRKHSSRH*KAEQGK
Trigger: TTTCCCTTGTTCAGCTTTTCAGTGTCTGCTGGAATG...CTTTCTTAAGGAAGTCAGTACGTGGGCAACAGTGATGAGAGGAAGAGAGGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329620.9
ENST00000412113.5
ENST00000436265.5
ENST00000543212.5
CDS-3UTR TCA 90 bp CCAGAAGACTCTCAAGGCAAAGGCCAGGAAGAATATCATACGTTTCACTTCCTATACTCAAAACGTCAGTaGGGAGCTGAGGAACTCAGC +
Preference number: 4 (lower is better)
Translates to: PEDSQGKGQEEYHTFHFLYSKRQ*GAEELS
Trigger: GCTGAGTTCCTCAGCTCCTCACTGACGTTTTGAGTA...TAGGAAGTGAAACGTATGATATTCTTCCTGGCCTTTGCCTTGAGAGTCTTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329620.9
CDS-3UTR TCA 90 bp GAGCTGAACCAGTCATTTAAGGTTCTAAGTGGAAATCCTCGGGCAGCAGCAGAGCAGCAAATACCGGTATaGAGTGAGAAACAATGTTCC +
Preference number: 4 (lower is better)
Translates to: ELNQSFKVLSGNPRAAAEQQIPV*SEKQCS
Trigger: GGAACATTGTTTCTCACTTCATACCGGTATTTGCTG...CTCTGCTGCTGCCCGAGGATTTCCACTTAGAACCTTAAATGACTGGTTCAGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445185.1
CDS-3UTR GCA 90 bp CACGTACTGACTTCCTTAAGAAAGGCTGTCCTTGAGAACATGGGAGCATCTGGTGCCACCATATGGAGCTaGCTGAATAGTTCCCTTAAT +
Preference number: 4 (lower is better)
Translates to: HVLTSLRKAVLENMGASGATIWS*LNSSLN
Trigger: ATTAAGGGAACTATTCAGGCAGCTCCATATGGTGGC...ACCAGATGCTCCCATGTTCTCAAGGACAGCCTTTCTTAAGGAAGTCAGTACGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329620.9
ENST00000412113.5
ENST00000436265.5
ENST00000543212.5
CDS-3UTR GCA 90 bp CTCTCCTCTCTTCCTCTCATCACTGTTGCCCACGTACTGACTTCCTTAAGAAAGGCCACCATATGGAGCTaGCTGAATAGTTCCCTTAAT +
Preference number: 4 (lower is better)
Translates to: LSSLPLITVAHVLTSLRKATIWS*LNSSLN
Trigger: ATTAAGGGAACTATTCAGGCAGCTCCATATGGTGGC...CTTTCTTAAGGAAGTCAGTACGTGGGCAACAGTGATGAGAGGAAGAGAGGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329620.9
ENST00000412113.5
ENST00000436265.5
ENST00000543212.5
CDS-3UTR GCA 90 bp TTAAGAAAGGCTGTCCTTGAGAACATGGGAGCATCTGGTTTCCTAATTTTCACATTCAGGAGCCTGGGCTaGTGTAGATTCCTGAGGCCT +
Preference number: 4 (lower is better)
Translates to: LRKAVLENMGASGFLIFTFRSLG*CRFLRP
Trigger: AGGCCTCAGGAATCTACAGCAGCCCAGGCTCCTGAA...TGTGAAAATTAGGAAACCAGATGCTCCCATGTTCTCAAGGACAGCCTTTCTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329620.9
ENST00000412113.5
ENST00000436265.5
ENST00000543212.5
CDS-3UTR GCA 90 bp CATAAGATTGCCCTTCCAAAGGGTGGAACAACTACCTGCGAGAAGCCTGTGATCTTCTGGCCATGCTATTaGCTTGGTTATTCGGCAATT +
Preference number: 4 (lower is better)
Translates to: HKIALPKGGTTTCEKPVIFWPCY*LGYSAI
Trigger: AATTGCCGAATAACCAAGGCAATAGCATGGCCAGAA...GATCACAGGCTTCTCGCAGGTAGTTGTTCCACCCTTTGGAAGGGCAATCTTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328823.13
CDS-3UTR GCA 90 bp TGGAACAACTACCTGCGAGAAGCCTGTGATCACATACCTGAGTCGTCCTCCTTACCACATGCATCTTTGTaGACACATGCAAGTTTTCTC +
Preference number: 4 (lower is better)
Translates to: WNNYLREACDHIPESSSLPHASL*THASFL
Trigger: GAGAAAACTTGCATGTGTGCACAAAGATGCATGTGG...TAAGGAGGACGACTCAGGTATGTGATCACAGGCTTCTCGCAGGTAGTTGTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328823.13
CDS-3UTR GCA 90 bp CATAATCTTAGGATTTGTGAGAAGCCCACCAACAAAGCAGATGGTGGTGGGGATTCCTCTCATCACTGTTaGCCACGTACTGACTTCCTT +
Preference number: 4 (lower is better)
Translates to: HNLRICEKPTNKADGGGDSSHHC*PRTDFL
Trigger: AAGGAAGTCAGTACGTGGGCAACAGTGATGAGAGGA...ATCCCCACCACCATCTGCTTTGTTGGTGGGCTTCTCACAAATCCTAAGATTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329620.9
CDS-3UTR GCA 90 bp ACCTCCATGTACCCAGCATCCAGCTCCAGTAACCATCAACGTGTACCATTATTTGGGAAACCTTATCCCTaGTCTAGTTGGTTGAGTCTC +
Preference number: 4 (lower is better)
Translates to: TSMYPASSSSNHQRVPLFGKPYP*SSWLSL
Trigger: GAGACTCAACCAACTAGAGCAGGGATAAGGTTTCCC...AAATAATGGTACACGTTGATGGTTACTGGAGCTGGATGCTGGGTACATGGAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436265.5
CDS-3UTR GCA 90 bp AAGGCTGTCCTTGAGAACATGGGAGCATCTGGTTTCCTAATTTTCACAATGCAGAACTCAGCACATGAGTaGTCTCAGCATGCAGAAGGC +
Preference number: 4 (lower is better)
Translates to: KAVLENMGASGFLIFTMQNSAHE*SQHAEG
Trigger: GCCTTCTGCATGCTGAGAGCACTCATGTGCTGAGTT...CTGCATTGTGAAAATTAGGAAACCAGATGCTCCCATGTTCTCAAGGACAGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329620.9
CDS-3UTR CCA 90 bp AAGGCTGTCCTTGAGAACATGGGAGCATCTGGTTTCCTAATTTTCACAATGCAGTTCCCAGCCACCATATaGAGCTGCCTGAATAGTTCC +
Preference number: 4 (lower is better)
Translates to: KAVLENMGASGFLIFTMQFPATI*SCLNSS
Trigger: GGAACTATTCAGGCAGCTCCATATGGTGGCTGGGAA...CTGCATTGTGAAAATTAGGAAACCAGATGCTCCCATGTTCTCAAGGACAGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329620.9
ENST00000412113.5
ENST00000436265.5
ENST00000543212.5
CDS-3UTR CCA 90 bp ACTGTTGCCCACGTACTGACTTCCTTAAGAAAGGCTGTCCTTGAGAACATGGGAAACTGTGGCTCCACTTaGTTCTATCCTTACACAGTC +
Preference number: 4 (lower is better)
Translates to: TVAHVLTSLRKAVLENMGNCGST*FYPYTV
Trigger: GACTGTGTAAGGATAGAACCAAGTGGAGCCACAGTT...TCCCATGTTCTCAAGGACAGCCTTTCTTAAGGAAGTCAGTACGTGGGCAACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329620.9
CDS-3UTR CCA 90 bp GACCCCACCTCAAATCTACCTGGTACAAGTATAACTAACATGAAGAGCAGAAGATTCTCTAGCAGTCCATaGTTGTCTGCCCCACCCTCT +
Preference number: 4 (lower is better)
Translates to: DPTSNLPGTSITNMKSRRFSSSP*LSAPPS
Trigger: AGAGGGTGGGGCAGACAACCATGGACTGCTAGAGAA...TCTTCTGCTCTTCATGTTAGTTATACTTGTACCAGGTAGATTTGAGGTGGGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329620.9
CDS-3UTR TCA 90 bp TTAAGAAAGGCTGTCCTTGAGAACATGGGAGCATCTGGTTTCCTAATTTTCACATTCTCGGTGTGGCTCTaGTTCACCGCCATCTTGCTT +
Preference number: 4 (lower is better)
Translates to: LRKAVLENMGASGFLIFTFSVWL*FTAILL
Trigger: AAGCAAGATGGCGGTGAATCAGAGCCACACCGAGAA...TGTGAAAATTAGGAAACCAGATGCTCCCATGTTCTCAAGGACAGCCTTTCTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329620.9
ENST00000412113.5
ENST00000436265.5
CDS-3UTR TCA 90 bp GGGAGCATCTGGTTTCCTAATTTTCACAATGCAGATCAATCAATGACTCTAAGCTTCTCGGTGTGGCTCTaGTTCACCGCCATCTTGCTT +
Preference number: 4 (lower is better)
Translates to: GSIWFPNFHNADQSMTLSFSVWL*FTAILL
Trigger: AAGCAAGATGGCGGTGAATCAGAGCCACACCGAGAA...GCTTAGAGTCATTGATTGATCTGCATTGTGAAAATTAGGAAACCAGATGCTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329620.9
ENST00000412113.5
ENST00000436265.5
CDS-3UTR TCA 90 bp CTGAGTCGTCCTCCTTATCCTGACTTCAATTTTAGGGTACCTCTTTGCTTGGTGTCACCCGGTATGAAGTaGGAAACAATGTTCCTGTCT +
Preference number: 4 (lower is better)
Translates to: LSRPPYPDFNFRVPLCLVSPGMK*ETMFLS
Trigger: AGACAGGAACATTGTTTCTCACTTCATACCGGGTGA...CACCAAGCAAAGAGGTACCCTAAAATTGAAGTCAGGATAAGGAGGACGACTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328823.13
ENST00000329620.9
ENST00000412113.5
ENST00000436265.5
CDS-3UTR TCA 90 bp TGCACAGGAGAACATGGTGGAATTCCACCTTTAAGAAACTCGAACCTGCTACGCGAAAATCACCCGGTATaGAGTGAGAAACAATGTTCC +
Preference number: 4 (lower is better)
Translates to: CTGEHGGIPPLRNSNLLRENHPV*SEKQCS
Trigger: GGAACATTGTTTCTCACTTCATACCGGGTGATTTTC...GCGTAGCAGGTTCGAGTTTCTTAAAGGTGGAATTCCACCATGTTCTCCTGTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329620.9
CDS-3UTR TCA 90 bp GAACAAGGGAAACCTTATCCCTGCTCTAGTTGGTTGAGTCTCTCCTCTCTTCCTGAAAATCACCCGGTATaGAGTGAGAAACAATGTTCC +
Preference number: 4 (lower is better)
Translates to: EQGKPYPCSSWLSLSSLPENHPV*SEKQCS
Trigger: GGAACATTGTTTCTCACTTCATACCGGGTGATTTTC...AGGAAGAGAGGAGAGACTCAACCAACTAGAGCAGGGATAAGGTTTCCCTTGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329620.9
ENST00000412113.5
ENST00000436265.5
CDS-3UTR TCA 90 bp CACGTACTGACTTCCTTAAGAAAGGCTGTCCTTGAGAACATGGGAGCATCTGGTTGGAGCATGAAGTTATaGAAATCACCCGGTATGAAG +
Preference number: 4 (lower is better)
Translates to: HVLTSLRKAVLENMGASGWSMKL*KSPGMK
Trigger: CTTCATACCGGGTGATTTTCATAACTTCATGCTCCA...ACCAGATGCTCCCATGTTCTCAAGGACAGCCTTTCTTAAGGAAGTCAGTACGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329620.9
ENST00000412113.5
ENST00000436265.5
CDS-3UTR TCA 90 bp GAACAAGGGAAACCTTATCCCTGCTCTAGTTGGTTGAGTCTCTCCTCTCTTCCTATCACTGATGGAGCATaGAGTTATGAAAATCACCCG +
Preference number: 4 (lower is better)
Translates to: EQGKPYPCSSWLSLSSLPITDGA*SYENHP
Trigger: CGGGTGATTTTCATAACTTCATGCTCCATCAGTGAT...AGGAAGAGAGGAGAGACTCAACCAACTAGAGCAGGGATAAGGTTTCCCTTGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329620.9
ENST00000412113.5
ENST00000436265.5
CDS-3UTR TCA 90 bp CTGAGTCGTCCTCCTTATCCTGACTTCAATTTTAGGGTACCTCTTTGCTTGGTGCTGGTTGTTCAACAGTaGGGTTCGTCATCAGATCAA +
Preference number: 4 (lower is better)
Translates to: LSRPPYPDFNFRVPLCLVLVVQQ*GSSSDQ
Trigger: TTGATCTGATGACGAACCTCACTGTTGAACAACCAG...CACCAAGCAAAGAGGTACCCTAAAATTGAAGTCAGGATAAGGAGGACGACTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328823.13
ENST00000329620.9
ENST00000412113.5
ENST00000436265.5
ENST00000543212.5
CDS-3UTR TCA 90 bp CTCCAGAAGACTCTCAAGGCAAAGGCCAGGAAGAATATCATACGTTTCACTTCCCTGGTTGTTCAACAGTaGGGTTCGTCATCAGATCAA +
Preference number: 4 (lower is better)
Translates to: LQKTLKAKARKNIIRFTSLVVQQ*GSSSDQ
Trigger: TTGATCTGATGACGAACCTCACTGTTGAACAACCAG...GGAAGTGAAACGTATGATATTCTTCCTGGCCTTTGCCTTGAGAGTCTTCTGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329620.9
ENST00000412113.5
CDS-3UTR TCA 90 bp CACATTCCAGCAGACACTGAAAAGCTGAACAAGGGAAACCTTATCCCTGCTCTACTGGTTGTTCAACAGTaGGGTTCGTCATCAGATCAA +
Preference number: 4 (lower is better)
Translates to: HIPADTEKLNKGNLIPALLVVQQ*GSSSDQ
Trigger: TTGATCTGATGACGAACCTCACTGTTGAACAACCAG...TAGAGCAGGGATAAGGTTTCCCTTGTTCAGCTTTTCAGTGTCTGCTGGAATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329620.9
ENST00000412113.5
ENST00000436265.5
ENST00000543212.5
CDS-3UTR TCA 90 bp CTTGAGAACATGGGAGCATCTGGTTTCCTAATTTTCACAATGCAGATCAATCAATCCATATCGCACAGGTaGGGCTCTGTATCCCACAGG +
Preference number: 4 (lower is better)
Translates to: LENMGASGFLIFTMQINQSISHR*GSVSHR
Trigger: CCTGTGGGATACAGAGCCTCACCTGTGCGATATGGA...TTGATTGATCTGCATTGTGAAAATTAGGAAACCAGATGCTCCCATGTTCTCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329620.9
ENST00000412113.5
ENST00000436265.5
ENST00000543212.5
CDS-3UTR TCA 90 bp ATTCCAGCAGACACTGAAAAGCTGAACAAGGGAAACCTTATCCCTGCTCTAGTTTCAATGACTCTAAGCTaGGTCGTCCTCCTTATCCTG +
Preference number: 4 (lower is better)
Translates to: IPADTEKLNKGNLIPALVSMTLS*VVLLIL
Trigger: CAGGATAAGGAGGACGACTCAGCTTAGAGTCATTGA...AACTAGAGCAGGGATAAGGTTTCCCTTGTTCAGCTTTTCAGTGTCTGCTGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329620.9
ENST00000412113.5
ENST00000436265.5
ENST00000543212.5
CDS-3UTR TCA 90 bp TCCAGTAACCATCAACGTGTACCATTATTTCATCTCTCTTCCTGCACATGCTCTAAGAAAGGCTGTCCTTaGGAACATGGGAGCATCTGG +
Preference number: 4 (lower is better)
Translates to: SSNHQRVPLFHLSSCTCSKKGCP*EHGSIW
Trigger: CCAGATGCTCCCATGTTCTCAAGGACAGCCTTTCTT...AGAGCATGTGCAGGAAGAGAGATGAAATAATGGTACACGTTGATGGTTACTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436265.5
CDS-3UTR TCA 90 bp GGGAGCATCTGGTTTCCTAATTTTCACAATGCAGATCAATCAATGACTCTAAGCCCTGCTCTAGTTGGTTaGGTCTCTCCTCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: GSIWFPNFHNADQSMTLSPALVG*VSPLFL
Trigger: GAGGAAGAGAGGAGAGACTCAACCAACTAGAGCAGG...GCTTAGAGTCATTGATTGATCTGCATTGTGAAAATTAGGAAACCAGATGCTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329620.9
ENST00000412113.5
ENST00000436265.5
ENST00000543212.5
CDS-3UTR TCA 90 bp CACATTCCAGCAGACACTGAAAAGCTGAACAAGGGAAACCTTATCCCTGCTCTACAGACACTGAAAAGCTaGACAAGGGAAACCTTATCC +
Preference number: 4 (lower is better)
Translates to: HIPADTEKLNKGNLIPALQTLKS*TRETLS
Trigger: GGATAAGGTTTCCCTTGTTCAGCTTTTCAGTGTCTG...TAGAGCAGGGATAAGGTTTCCCTTGTTCAGCTTTTCAGTGTCTGCTGGAATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329620.9
ENST00000412113.5
ENST00000436265.5
ENST00000543212.5
CDS-3UTR TCA 90 bp CCTCAGCAAAGCAAAAACCAGGGTCCTTTGAATATACAGGACACAAAGCTCTTCTGCAGAAGGCTCAGCTaGATTCTGACTGGATTTGTC +
Preference number: 4 (lower is better)
Translates to: PQQSKNQGPLNIQDTKLFCRRLS*ILTGFV
Trigger: GACAAATCCAGTCAGAATTCAGCTGAGCCTTCTGCA...GAAGAGCTTTGTGTCCTGTATATTCAAAGGACCCTGGTTTTTGCTTTGCTGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329620.9
CDS-3UTR GCA 90 bp CTGAGTCGTCCTCCTTATCCTGACTTCAATTTTAGGGTACCTCTTTGCTTGGTGGCCACCATATGGAGCTaGCTGAATAGTTCCCTTAAT +
Preference number: 4 (lower is better)
Translates to: LSRPPYPDFNFRVPLCLVATIWS*LNSSLN
Trigger: ATTAAGGGAACTATTCAGGCAGCTCCATATGGTGGC...CACCAAGCAAAGAGGTACCCTAAAATTGAAGTCAGGATAAGGAGGACGACTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328823.13
ENST00000329620.9
ENST00000412113.5
ENST00000436265.5
ENST00000543212.5
CDS-3UTR GCA 90 bp ACTGTTGCCCACGTACTGACTTCCTTAAGAAAGGCTGTCCTTGAGAACATGGGATTTAGGGTACCTCTTTaGTTGGTGAGTCTTCAAGGT +
Preference number: 4 (lower is better)
Translates to: TVAHVLTSLRKAVLENMGFRVPL*LVSLQG
Trigger: ACCTTGAAGACTCACCAAGCAAAGAGGTACCCTAAA...TCCCATGTTCTCAAGGACAGCCTTTCTTAAGGAAGTCAGTACGTGGGCAACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329620.9
ENST00000412113.5
ENST00000436265.5
ENST00000543212.5
CDS-3UTR GCA 90 bp CTTCTGATGTGTGAGCTAGAGTATCATCACATTCCAGCAGACACTGAAAAGCTGTCCTCTCATCACTGTTaGCCACGTACTGACTTCCTT +
Preference number: 4 (lower is better)
Translates to: LLMCELEYHHIPADTEKLSSHHC*PRTDFL
Trigger: AAGGAAGTCAGTACGTGGGCAACAGTGATGAGAGGA...CAGCTTTTCAGTGTCTGCTGGAATGTGATGATACTCTAGCTCACACATCAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436265.5
CDS-3UTR GCA 90 bp AAGGCTGTCCTTGAGAACATGGGAGCATCTGGTTTCCTAATTTTCACAATGCAGTCCTCTCATCACTGTTaGCCACGTACTGACTTCCTT +
Preference number: 4 (lower is better)
Translates to: KAVLENMGASGFLIFTMQSSHHC*PRTDFL
Trigger: AAGGAAGTCAGTACGTGGGCAACAGTGATGAGAGGA...CTGCATTGTGAAAATTAGGAAACCAGATGCTCCCATGTTCTCAAGGACAGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329620.9
ENST00000412113.5
ENST00000436265.5
ENST00000543212.5
CDS-3UTR GCA 90 bp ATTCCAGCAGACACTGAAAAGCTGAACAAGGGAAACCTTATCCCTGCTCTAGTTGGGAAACCTTATCCCTaGTCTAGTTGGTTGAGTCTC +
Preference number: 4 (lower is better)
Translates to: IPADTEKLNKGNLIPALVGKPYP*SSWLSL
Trigger: GAGACTCAACCAACTAGAGCAGGGATAAGGTTTCCC...AACTAGAGCAGGGATAAGGTTTCCCTTGTTCAGCTTTTCAGTGTCTGCTGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329620.9
ENST00000412113.5
ENST00000436265.5
ENST00000543212.5
CDS-3UTR GCA 90 bp AAGGCAAAGGCCAGGAAGAATATCATACGTTTCACTTCCTACCTGACAATGAGGGGGAAACCTTATCCCTaGTCTAGTTGGTTGAGTCTC +
Preference number: 4 (lower is better)
Translates to: KAKARKNIIRFTSYLTMRGKPYP*SSWLSL
Trigger: GAGACTCAACCAACTAGAGCAGGGATAAGGTTTCCC...CCTCATTGTCAGGTAGGAAGTGAAACGTATGATATTCTTCCTGGCCTTTGCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329620.9
ENST00000412113.5
CDS-3UTR CCA 90 bp ACTGTTGCCCACGTACTGACTTCCTTAAGAAAGGCTGTCCTTGAGAACATGGGAGCTTTCACCATCAACTaGGCAAATTCAATGGCATCT +
Preference number: 4 (lower is better)
Translates to: TVAHVLTSLRKAVLENMGAFTIN*ANSMAS
Trigger: AGATGCCATTGAATTTGCCCAGTTGATGGTGAAAGC...TCCCATGTTCTCAAGGACAGCCTTTCTTAAGGAAGTCAGTACGTGGGCAACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329620.9
ENST00000412113.5
ENST00000436265.5
ENST00000543212.5
CDS-3UTR CCA 90 bp GCAGCAGAGGCAGCTTTCACCATCAACTGGGCAAATTCAATGGCATCTCCATTTGCTTTCACCATCAACTaGGCAAATTCAATGGCATCT +
Preference number: 4 (lower is better)
Translates to: AAEAAFTINWANSMASPFAFTIN*ANSMAS
Trigger: AGATGCCATTGAATTTGCCCAGTTGATGGTGAAAGC...AAATGGAGATGCCATTGAATTTGCCCAGTTGATGGTGAAAGCTGCCTCTGCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445185.1
CDS-3UTR CCA 90 bp CTGAGTCGTCCTCCTTATCCTGACTTCAATTTTAGGGTACCTCTTTGCTTGGTGTATCCCTGCTCTAGTTaGTTGAGTCTCTCCTCTCTT +
Preference number: 4 (lower is better)
Translates to: LSRPPYPDFNFRVPLCLVYPCSS*LSLSSL
Trigger: AAGAGAGGAGAGACTCAACCAACTAGAGCAGGGATA...CACCAAGCAAAGAGGTACCCTAAAATTGAAGTCAGGATAAGGAGGACGACTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329620.9
ENST00000412113.5
ENST00000436265.5
ENST00000543212.5
CDS-3UTR TCA 90 bp TGTTTTCTCATCTCAGGTTGCATTTCCCTAACACTAGTCAAGCTGAACATCTTTTTCTCGGTGTGGCTCTaGTTCACCGCCATCTTGCTT +
Preference number: 4 (lower is better)
Translates to: CFLISGCISLTLVKLNIFFSVWL*FTAILL
Trigger: AAGCAAGATGGCGGTGAATCAGAGCCACACCGAGAA...AAAGATGTTCAGCTTGACTAGTGTTAGGGAAATGCAACCTGAGATGAGAAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328823.13
CDS-3UTR TCA 90 bp CTGAGTCGTCCTCCTTATCCTGACTTCAATTTTAGGGTACCTCTTTGCTTGGTGGAAAATCACCCGGTATaGAGTGAGAAACAATGTTCC +
Preference number: 4 (lower is better)
Translates to: LSRPPYPDFNFRVPLCLVENHPV*SEKQCS
Trigger: GGAACATTGTTTCTCACTTCATACCGGGTGATTTTC...CACCAAGCAAAGAGGTACCCTAAAATTGAAGTCAGGATAAGGAGGACGACTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328823.13
ENST00000329620.9
ENST00000412113.5
ENST00000436265.5
CDS-3UTR TCA 90 bp AAGGCTGTCCTTGAGAACATGGGAGCATCTGGTTTCCTAATTTTCACAATGCAGCTGGTTGTTCAACAGTaGGGTTCGTCATCAGATCAA +
Preference number: 4 (lower is better)
Translates to: KAVLENMGASGFLIFTMQLVVQQ*GSSSDQ
Trigger: TTGATCTGATGACGAACCTCACTGTTGAACAACCAG...CTGCATTGTGAAAATTAGGAAACCAGATGCTCCCATGTTCTCAAGGACAGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329620.9
ENST00000412113.5
ENST00000436265.5
ENST00000543212.5
CDS-3UTR TCA 90 bp AGAAGGCTTTCTCTACCTCTAGACATAGTTTTCAACAGGTGTATAATACTCCATTCCATATCGCACAGGTaGGGCTCTGTATCCCACAGG +
Preference number: 4 (lower is better)
Translates to: RRLSLPLDIVFNRCIILHSISHR*GSVSHR
Trigger: CCTGTGGGATACAGAGCCTCACCTGTGCGATATGGA...ATGGAGTATTATACACCTGTTGAAAACTATGTCTAGAGGTAGAGAAAGCCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328823.13
CDS-3UTR TCA 90 bp ATAGAACAAATTGGACTGAGCCTTTGGGGGAAACAACTGTACCAGACAGTGGGATACCTCTTTGCTTGGTaGGTCTTCAAGGTTTACATC +
Preference number: 4 (lower is better)
Translates to: IEQIGLSLWGKQLYQTVGYLFAW*VFKVYI
Trigger: GATGTAAACCTTGAAGACTCACCAAGCAAAGAGGTA...TCCCACTGTCTGGTACAGTTGTTTCCCCCAAAGGCTCAGTCCAATTTGTTCTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329620.9
CDS-3UTR TCA 90 bp CACATTCCAGCAGACACTGAAAAGCTGAACAAGGGAAACCTTATCCCTGCTCTATACCTCTTTGCTTGGTaGGTCTTCAAGGTTTACATC +
Preference number: 4 (lower is better)
Translates to: HIPADTEKLNKGNLIPALYLFAW*VFKVYI
Trigger: GATGTAAACCTTGAAGACTCACCAAGCAAAGAGGTA...TAGAGCAGGGATAAGGTTTCCCTTGTTCAGCTTTTCAGTGTCTGCTGGAATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329620.9
ENST00000412113.5
ENST00000436265.5
ENST00000543212.5
CDS-3UTR TCA 90 bp CGTCCTCCTTATCCTGACTTCAATTTTAGGGTACCTCTTTGCTTGGTGAGTCTTCAGACACTGAAAAGCTaGACAAGGGAAACCTTATCC +
Preference number: 4 (lower is better)
Translates to: RPPYPDFNFRVPLCLVSLQTLKS*TRETLS
Trigger: GGATAAGGTTTCCCTTGTTCAGCTTTTCAGTGTCTG...AAGACTCACCAAGCAAAGAGGTACCCTAAAATTGAAGTCAGGATAAGGAGGACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329620.9
ENST00000412113.5
ENST00000436265.5
ENST00000543212.5
CDS-3UTR TCA 90 bp ATTCCAGCAGACACTGAAAAGCTGAACAAGGGAAACCTTATCCCTGCTCTAGTTCATTCCAGCAGACACTaGAAAGCTGAACAAGGGAAA +
Preference number: 4 (lower is better)
Translates to: IPADTEKLNKGNLIPALVHSSRH*KAEQGK
Trigger: TTTCCCTTGTTCAGCTTTTCAGTGTCTGCTGGAATG...AACTAGAGCAGGGATAAGGTTTCCCTTGTTCAGCTTTTCAGTGTCTGCTGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329620.9
ENST00000412113.5
ENST00000436265.5
ENST00000543212.5
CDS-3UTR TCA 90 bp CGTCCTCCTTATCCTGACTTCAATTTTAGGGTACCTCTTTGCTTGGTGAGTCTTCATTCCAGCAGACACTaGAAAGCTGAACAAGGGAAA +
Preference number: 4 (lower is better)
Translates to: RPPYPDFNFRVPLCLVSLHSSRH*KAEQGK
Trigger: TTTCCCTTGTTCAGCTTTTCAGTGTCTGCTGGAATG...AAGACTCACCAAGCAAAGAGGTACCCTAAAATTGAAGTCAGGATAAGGAGGACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329620.9
ENST00000412113.5
ENST00000436265.5
ENST00000543212.5
CDS-3UTR TCA 90 bp CATAATCTTAGGATTTGTGAGAAGCCCACCAACAAAGCAGATGGTGGTGGGGATAAAACCAGGGTCCTTTaGATATACAGGACACAAAGC +
Preference number: 4 (lower is better)
Translates to: HNLRICEKPTNKADGGGDKTRVL*IYRTQS
Trigger: GCTTTGTGTCCTGTATATTCAAAGGACCCTGGTTTT...ATCCCCACCACCATCTGCTTTGTTGGTGGGCTTCTCACAAATCCTAAGATTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329620.9
CDS-3UTR TCA 90 bp GAACAAGGGAAACCTTATCCCTGCTCTAGTTGGTTGAGTCTCTCCTCTCTTCCTAAAGCCAAGTCAACATaGAGGCAAAGGCTTTCTATT +
Preference number: 4 (lower is better)
Translates to: EQGKPYPCSSWLSLSSLPKAKST*RQRLSI
Trigger: AATAGAAAGCCTTTGCCTTCATGTTGACTTGGCTTT...AGGAAGAGAGGAGAGACTCAACCAACTAGAGCAGGGATAAGGTTTCCCTTGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329620.9
CDS-3UTR GCA 90 bp TTTTGGTCTCCTCAAAGAAGGCTTTCTCTACCTCTAGACATAGTTTTCAACAGGAAGGCATCTGTGGAGTaGACATATTCCCTTCCCCAG +
Preference number: 4 (lower is better)
Translates to: FWSPQRRLSLPLDIVFNRKASVE*TYSLPQ
Trigger: CTGGGGAAGGGAATATGTGCACTCCACAGATGCCTT...CCTGTTGAAAACTATGTCTAGAGGTAGAGAAAGCCTTCTTTGAGGAGACCAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328823.13
CDS-3UTR GCA 90 bp GGGAGCATCTGGTTTCCTAATTTTCACAATGCAGATCAATCAATGACTCTAAGCAAGGCATCTGTGGAGTaGACATATTCCCTTCCCCAG +
Preference number: 4 (lower is better)
Translates to: GSIWFPNFHNADQSMTLSKASVE*TYSLPQ
Trigger: CTGGGGAAGGGAATATGTGCACTCCACAGATGCCTT...GCTTAGAGTCATTGATTGATCTGCATTGTGAAAATTAGGAAACCAGATGCTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329620.9
ENST00000436265.5
ENST00000543212.5
CDS-3UTR GCA 90 bp CTGAGTCGTCCTCCTTATCCTGACTTCAATTTTAGGGTACCTCTTTGCTTGGTGATCTTTGTGCACACATaGAAGTTTTCTCGCAGGCAT +
Preference number: 4 (lower is better)
Translates to: LSRPPYPDFNFRVPLCLVIFVHT*KFSRRH
Trigger: ATGCCTGCGAGAAAACTTGCATGTGTGCACAAAGAT...CACCAAGCAAAGAGGTACCCTAAAATTGAAGTCAGGATAAGGAGGACGACTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328823.13
CDS-3UTR GCA 90 bp GCACATGCTCTTCTGATGTGTGAGCTAGAGTATCATCACATTCCAGCAGACACTTTTCATCTCTCTTCCTaGACATGCTCTTCTGATGTG +
Preference number: 4 (lower is better)
Translates to: AHALLMCELEYHHIPADTFHLSS*TCSSDV
Trigger: CACATCAGAAGAGCATGTGCAGGAAGAGAGATGAAA...AGTGTCTGCTGGAATGTGATGATACTCTAGCTCACACATCAGAAGAGCATGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436265.5
CDS-3UTR CCA 90 bp CACATTCCAGCAGACACTGAAAAGCTGAACAAGGGAAACCTTATCCCTGCTCTAGCTTTCACCATCAACTaGGCAAATTCAATGGCATCT +
Preference number: 4 (lower is better)
Translates to: HIPADTEKLNKGNLIPALAFTIN*ANSMAS
Trigger: AGATGCCATTGAATTTGCCCAGTTGATGGTGAAAGC...TAGAGCAGGGATAAGGTTTCCCTTGTTCAGCTTTTCAGTGTCTGCTGGAATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329620.9
ENST00000412113.5
ENST00000436265.5
ENST00000543212.5
CDS-3UTR CCA 90 bp AAGGCTGTCCTTGAGAACATGGGAGCATCTGGTTTCCTAATTTTCACAATGCAGTATCCCTGCTCTAGTTaGTTGAGTCTCTCCTCTCTT +
Preference number: 4 (lower is better)
Translates to: KAVLENMGASGFLIFTMQYPCSS*LSLSSL
Trigger: AAGAGAGGAGAGACTCAACCAACTAGAGCAGGGATA...CTGCATTGTGAAAATTAGGAAACCAGATGCTCCCATGTTCTCAAGGACAGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329620.9
ENST00000412113.5
ENST00000436265.5
ENST00000543212.5
CDS-3UTR CCA 90 bp CTCCAGAAGACTCTCAAGGCAAAGGCCAGGAAGAATATCATACGTTTCACTTCCTTGCACAGGAGAACATaGTGGAATTCCACCTTTAAG +
Preference number: 4 (lower is better)
Translates to: LQKTLKAKARKNIIRFTSLHRRT*WNSTFK
Trigger: CTTAAAGGTGGAATTCCACCATGTTCTCCTGTGCAA...GGAAGTGAAACGTATGATATTCTTCCTGGCCTTTGCCTTGAGAGTCTTCTGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329620.9
CDS-3UTR CCA 90 bp GACCCCACCTCAAATCTACCTGGTACAAGTATAACTAACATGAAGAGCAGAAGAAATCGCTTAAACCTGTaGGGCAAAGGTTGCAGTGAG +
Preference number: 4 (lower is better)
Translates to: DPTSNLPGTSITNMKSRRNRLNL*GKGCSE
Trigger: CTCACTGCAACCTTTGCCCCACAGGTTTAAGCGATT...TCTTCTGCTCTTCATGTTAGTTATACTTGTACCAGGTAGATTTGAGGTGGGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329620.9
CDS-3UTR CCA 90 bp CCTTTGCATAATCTTAGGATTTGTGAGAAGCCCACCAACAAAGCAGATGGTGGTTATGGTACACAGAGTTaGATCTCTGACACCCTGGTT +
Preference number: 4 (lower is better)
Translates to: PLHNLRICEKPTNKADGGYGTQS*ISDTLV
Trigger: AACCAGGGTGTCAGAGATCCAACTCTGTGTACCATA...ACCACCATCTGCTTTGTTGGTGGGCTTCTCACAAATCCTAAGATTATGCAAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329620.9
CDS-3UTR TCA 90 bp TCTCAAGGCAAAGGCCAGGAAGAATATCATACGTTTCACTTCCTACCTGACAATTCACCCGGTATGAAGTaGGAAACAATGTTCCTGTCT +
Preference number: 4 (lower is better)
Translates to: SQGKGQEEYHTFHFLPDNSPGMK*ETMFLS
Trigger: AGACAGGAACATTGTTTCTCACTTCATACCGGGTGA...ATTGTCAGGTAGGAAGTGAAACGTATGATATTCTTCCTGGCCTTTGCCTTGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329620.9
ENST00000412113.5
CDS-3UTR TCA 90 bp CCAGAAGACTCTCAAGGCAAAGGCCAGGAAGAATATCATACGTTTCACTTCCTAATCACTGATGGAGCATaGAGTTATGAAAATCACCCG +
Preference number: 4 (lower is better)
Translates to: PEDSQGKGQEEYHTFHFLITDGA*SYENHP
Trigger: CGGGTGATTTTCATAACTTCATGCTCCATCAGTGAT...TAGGAAGTGAAACGTATGATATTCTTCCTGGCCTTTGCCTTGAGAGTCTTCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329620.9
ENST00000412113.5
CDS-3UTR TCA 90 bp CATCCAGCTCCAGTAACCATCAACGTGTACCATTATTTCATCTCTCTTCCTGCAATCACTGATGGAGCATaGAGTTATGAAAATCACCCG +
Preference number: 4 (lower is better)
Translates to: HPAPVTINVYHYFISLPAITDGA*SYENHP
Trigger: CGGGTGATTTTCATAACTTCATGCTCCATCAGTGAT...TGCAGGAAGAGAGATGAAATAATGGTACACGTTGATGGTTACTGGAGCTGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436265.5
CDS-3UTR TCA 90 bp ATCTTCCCACATGCATCTTTGTGCACACATGCAAGTTTTCTCGCAGGCATATTTCTGGTTGTTCAACAGTaGGGTTCGTCATCAGATCAA +
Preference number: 4 (lower is better)
Translates to: IFPHASLCTHASFLAGIFLVVQQ*GSSSDQ
Trigger: TTGATCTGATGACGAACCTCACTGTTGAACAACCAG...AAATATGCCTGCGAGAAAACTTGCATGTGTGCACAAAGATGCATGTGGGAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328823.13
CDS-3UTR TCA 90 bp CGTCCTCCTTATCCTGACTTCAATTTTAGGGTACCTCTTTGCTTGGTGAGTCTTTACCTCTTTGCTTGGTaGGTCTTCAAGGTTTACATC +
Preference number: 4 (lower is better)
Translates to: RPPYPDFNFRVPLCLVSLYLFAW*VFKVYI
Trigger: GATGTAAACCTTGAAGACTCACCAAGCAAAGAGGTA...AAGACTCACCAAGCAAAGAGGTACCCTAAAATTGAAGTCAGGATAAGGAGGACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328823.13
ENST00000329620.9
ENST00000412113.5
ENST00000436265.5
ENST00000543212.5
CDS-3UTR TCA 90 bp ATTCCAGCAGACACTGAAAAGCTGAACAAGGGAAACCTTATCCCTGCTCTAGTTTACCTCTTTGCTTGGTaGGTCTTCAAGGTTTACATC +
Preference number: 4 (lower is better)
Translates to: IPADTEKLNKGNLIPALVYLFAW*VFKVYI
Trigger: GATGTAAACCTTGAAGACTCACCAAGCAAAGAGGTA...AACTAGAGCAGGGATAAGGTTTCCCTTGTTCAGCTTTTCAGTGTCTGCTGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329620.9
ENST00000412113.5
ENST00000436265.5
ENST00000543212.5
CDS-3UTR TCA 90 bp CTTGAGAACATGGGAGCATCTGGTTTCCTAATTTTCACAATGCAGATCAATCAAAAGAAAGGCTGTCCTTaGGAACATGGGAGCATCTGG +
Preference number: 4 (lower is better)
Translates to: LENMGASGFLIFTMQINQKKGCP*EHGSIW
Trigger: CCAGATGCTCCCATGTTCTCAAGGACAGCCTTTCTT...TTGATTGATCTGCATTGTGAAAATTAGGAAACCAGATGCTCCCATGTTCTCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329620.9
ENST00000412113.5
ENST00000436265.5
ENST00000543212.5
CDS-3UTR TCA 90 bp ATTCCAGCAGACACTGAAAAGCTGAACAAGGGAAACCTTATCCCTGCTCTAGTTAATAAAATGGTAGAGTaGACCTCCATGTACCCAGCA +
Preference number: 4 (lower is better)
Translates to: IPADTEKLNKGNLIPALVNKMVE*TSMYPA
Trigger: TGCTGGGTACATGGAGGTTCACTCTACCATTTTATT...AACTAGAGCAGGGATAAGGTTTCCCTTGTTCAGCTTTTCAGTGTCTGCTGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436265.5
CDS-3UTR GCA 90 bp CACGTACTGACTTCCTTAAGAAAGGCTGTCCTTGAGAACATGGGAGCATCTGGTTCCCTTAATGAAGTTTaGAGCAAATACTGGTTGTTC +
Preference number: 4 (lower is better)
Translates to: HVLTSLRKAVLENMGASGSLNEV*SKYWLF
Trigger: GAACAACCAGTATTTGCTGCAAACTTCATTAAGGGA...ACCAGATGCTCCCATGTTCTCAAGGACAGCCTTTCTTAAGGAAGTCAGTACGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329620.9
ENST00000412113.5
ENST00000436265.5
ENST00000543212.5
CDS-3UTR GCA 90 bp TCTCAAGGCAAAGGCCAGGAAGAATATCATACGTTTCACTTCCTACCTGACAATGCCACCATATGGAGCTaGCTGAATAGTTCCCTTAAT +
Preference number: 4 (lower is better)
Translates to: SQGKGQEEYHTFHFLPDNATIWS*LNSSLN
Trigger: ATTAAGGGAACTATTCAGGCAGCTCCATATGGTGGC...ATTGTCAGGTAGGAAGTGAAACGTATGATATTCTTCCTGGCCTTTGCCTTGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329620.9
ENST00000412113.5
CDS-3UTR GCA 90 bp ACTATAGTATATGCTCCCTACAACTTGCTTTTCTCCTTATCAACAAGTCTTAGATTCAGGAGCCTGGGCTaGTGTAGATTCCTGAGGCCT +
Preference number: 4 (lower is better)
Translates to: TIVYAPYNLLFSLSTSLRFRSLG*CRFLRP
Trigger: AGGCCTCAGGAATCTACAGCAGCCCAGGCTCCTGAA...TCTAAGACTTGTTGATAAGGAGAAAAGCAAGTTGTAGGGAGCATATACTATAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328823.13
CDS-3UTR GCA 90 bp CGTCCTCCTTATCCTGACTTCAATTTTAGGGTACCTCTTTGCTTGGTGAGTCTTTTTAGGGTACCTCTTTaGTTGGTGAGTCTTCAAGGT +
Preference number: 4 (lower is better)
Translates to: RPPYPDFNFRVPLCLVSLFRVPL*LVSLQG
Trigger: ACCTTGAAGACTCACCAAGCAAAGAGGTACCCTAAA...AAGACTCACCAAGCAAAGAGGTACCCTAAAATTGAAGTCAGGATAAGGAGGACG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000328823.13
ENST00000329620.9
ENST00000412113.5
ENST00000436265.5
ENST00000543212.5
CDS-3UTR GCA 90 bp AAGGCTGTCCTTGAGAACATGGGAGCATCTGGTTTCCTAATTTTCACAATGCAGTTTAGGGTACCTCTTTaGTTGGTGAGTCTTCAAGGT +
Preference number: 4 (lower is better)
Translates to: KAVLENMGASGFLIFTMQFRVPL*LVSLQG
Trigger: ACCTTGAAGACTCACCAAGCAAAGAGGTACCCTAAA...CTGCATTGTGAAAATTAGGAAACCAGATGCTCCCATGTTCTCAAGGACAGCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329620.9
ENST00000412113.5
ENST00000436265.5
ENST00000543212.5
CDS-3UTR GCA 90 bp CCAGAAGACTCTCAAGGCAAAGGCCAGGAAGAATATCATACGTTTCACTTCCTATTTAGGGTACCTCTTTaGTTGGTGAGTCTTCAAGGT +
Preference number: 4 (lower is better)
Translates to: PEDSQGKGQEEYHTFHFLFRVPL*LVSLQG
Trigger: ACCTTGAAGACTCACCAAGCAAAGAGGTACCCTAAA...TAGGAAGTGAAACGTATGATATTCTTCCTGGCCTTTGCCTTGAGAGTCTTCTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329620.9
ENST00000412113.5
CDS-3UTR GCA 90 bp CTGAGTCGTCCTCCTTATCCTGACTTCAATTTTAGGGTACCTCTTTGCTTGGTGGACAGGAACCTTGAATaGGAGTGTGGAAAAAGTTAT +
Preference number: 4 (lower is better)
Translates to: LSRPPYPDFNFRVPLCLVDRNLE*ECGKSY
Trigger: ATAACTTTTTCCACACTCGCATTCAAGGTTCCTGTC...CACCAAGCAAAGAGGTACCCTAAAATTGAAGTCAGGATAAGGAGGACGACTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328823.13
CDS-3UTR CCA 90 bp ACTGTTGCCCACGTACTGACTTCCTTAAGAAAGGCTGTCCTTGAGAACATGGGAGAACATGGGAGCATCTaGTTTCCTAATTTTCACAAT +
Preference number: 4 (lower is better)
Translates to: TVAHVLTSLRKAVLENMGEHGSI*FPNFHN
Trigger: ATTGTGAAAATTAGGAAACCAGATGCTCCCATGTTC...TCCCATGTTCTCAAGGACAGCCTTTCTTAAGGAAGTCAGTACGTGGGCAACAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329620.9
ENST00000412113.5
ENST00000436265.5
ENST00000543212.5
CDS-3UTR CCA 90 bp GACCCCACCTCAAATCTACCTGGTACAAGTATAACTAACATGAAGAGCAGAAGATATCCCTGCTCTAGTTaGTTGAGTCTCTCCTCTCTT +
Preference number: 4 (lower is better)
Translates to: DPTSNLPGTSITNMKSRRYPCSS*LSLSSL
Trigger: AAGAGAGGAGAGACTCAACCAACTAGAGCAGGGATA...TCTTCTGCTCTTCATGTTAGTTATACTTGTACCAGGTAGATTTGAGGTGGGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329620.9
CDS-3UTR CCA 90 bp GGGAGCATCTGGTTTCCTAATTTTCACAATGCAGATCAATCAATGACTCTAAGCCGCTTTTCAGGTAACTaGACCCCACCTCAAATCTAC +
Preference number: 4 (lower is better)
Translates to: GSIWFPNFHNADQSMTLSRFSGN*TPPQIY
Trigger: GTAGATTTGAGGTGGGGTCCAGTTACCTGAAAAGCG...GCTTAGAGTCATTGATTGATCTGCATTGTGAAAATTAGGAAACCAGATGCTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329620.9
CDS-3UTR CCA 90 bp CATAATCTTAGGATTTGTGAGAAGCCCACCAACAAAGCAGATGGTGGTGGGGATTCTTATAGAACAAATTaGACTGAGCCTTTGGGGGAA +
Preference number: 4 (lower is better)
Translates to: HNLRICEKPTNKADGGGDSYRTN*TEPLGE
Trigger: TTCCCCCAAAGGCTCAGTCCAATTTGTTCTATAAGA...ATCCCCACCACCATCTGCTTTGTTGGTGGGCTTCTCACAAATCCTAAGATTATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329620.9
CDS-3UTR CCA 90 bp GAACAAGGGAAACCTTATCCCTGCTCTAGTTGGTTGAGTCTCTCCTCTCTTCCTAACTTCTCAGCATCTTaGTGCCAAATAAAATCTGGA +
Preference number: 4 (lower is better)
Translates to: EQGKPYPCSSWLSLSSLPNFSAS*CQIKSG
Trigger: TCCAGATTTTATTTGGCACCAAGATGCTGAGAAGTT...AGGAAGAGAGGAGAGACTCAACCAACTAGAGCAGGGATAAGGTTTCCCTTGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329620.9
CDS-3UTR CCA 90 bp ACTGTTGCCCACGTACTGACTTCCTTAAGAAAGGCTGTCCTTGAGAACATGGGAAATGAGGTAATCTTTTaGGTAAACCCAAATCCTGAG +
Preference number: 4 (lower is better)
Translates to: TVAHVLTSLRKAVLENMGNEVIF*VNPNPE
Trigger: CTCAGGATTTGGGTTTACCCAAAAGATTACCTCATT...TCCCATGTTCTCAAGGACAGCCTTTCTTAAGGAAGTCAGTACGTGGGCAACAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412113.5
3UTR CAA 72 bp CAAACTGCTGGTCACATCTGTATAGACCCTTTCCCTTaGACAGAACCCCTTCTTTCTAATCCATTTAGGAAG +
Preference number: 4 (lower is better)
Translates to: QTAGHICIDPFP*TEPLLSNPFRK
Trigger: CTTCCTAAATGGATTAGAAAGAAGGGGTTCTGTCAAAGGGAAAGGGTCTATACAGATGTGACCAGCAGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329620.9
CDS-3UTR TCA 90 bp AGCCCACCAACAAAGCAGATGGTGGTGGGGATCTTGGTAACAGAAATAAATTTATGGAGCATGAAGTTATaGAAATCACCCGGTATGAAG +
Preference number: 4 (lower is better)
Translates to: SPPTKQMVVGILVTEINLWSMKL*KSPGMK
Trigger: CTTCATACCGGGTGATTTTCATAACTTCATGCTCCA...TAAATTTATTTCTGTTACCAAGATCCCCACCACCATCTGCTTTGTTGGTGGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329620.9
CDS-3UTR TCA 90 bp CTTGAGAACATGGGAGCATCTGGTTTCCTAATTTTCACAATGCAGATCAATCAATCAATGACTCTAAGCTaGGTCGTCCTCCTTATCCTG +
Preference number: 4 (lower is better)
Translates to: LENMGASGFLIFTMQINQSMTLS*VVLLIL
Trigger: CAGGATAAGGAGGACGACTCAGCTTAGAGTCATTGA...TTGATTGATCTGCATTGTGAAAATTAGGAAACCAGATGCTCCCATGTTCTCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329620.9
ENST00000412113.5
ENST00000436265.5
ENST00000543212.5
CDS-3UTR TCA 90 bp GGGAGCATCTGGTTTCCTAATTTTCACAATGCAGATCAATCAATGACTCTAAGCCAGACACTGAAAAGCTaGACAAGGGAAACCTTATCC +
Preference number: 4 (lower is better)
Translates to: GSIWFPNFHNADQSMTLSQTLKS*TRETLS
Trigger: GGATAAGGTTTCCCTTGTTCAGCTTTTCAGTGTCTG...GCTTAGAGTCATTGATTGATCTGCATTGTGAAAATTAGGAAACCAGATGCTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329620.9
ENST00000412113.5
ENST00000436265.5
ENST00000543212.5
CDS-3UTR GCA 90 bp CTGAGTCGTCCTCCTTATCCTGACTTCAATTTTAGGGTACCTCTTTGCTTGGTGTCCCTTAATGAAGTTTaGAGCAAATACTGGTTGTTC +
Preference number: 4 (lower is better)
Translates to: LSRPPYPDFNFRVPLCLVSLNEV*SKYWLF
Trigger: GAACAACCAGTATTTGCTGCAAACTTCATTAAGGGA...CACCAAGCAAAGAGGTACCCTAAAATTGAAGTCAGGATAAGGAGGACGACTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328823.13
ENST00000329620.9
ENST00000412113.5
ENST00000436265.5
ENST00000543212.5
CDS-3UTR GCA 90 bp GGGAGCATCTGGTTTCCTAATTTTCACAATGCAGATCAATCAATGACTCTAAGCGCCACCATATGGAGCTaGCTGAATAGTTCCCTTAAT +
Preference number: 4 (lower is better)
Translates to: GSIWFPNFHNADQSMTLSATIWS*LNSSLN
Trigger: ATTAAGGGAACTATTCAGGCAGCTCCATATGGTGGC...GCTTAGAGTCATTGATTGATCTGCATTGTGAAAATTAGGAAACCAGATGCTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329620.9
ENST00000412113.5
ENST00000436265.5
ENST00000543212.5
CDS-3UTR GCA 90 bp CTTGAGAACATGGGAGCATCTGGTTTCCTAATTTTCACAATGCAGATCAATCAATCCTCTCATCACTGTTaGCCACGTACTGACTTCCTT +
Preference number: 4 (lower is better)
Translates to: LENMGASGFLIFTMQINQSSHHC*PRTDFL
Trigger: AAGGAAGTCAGTACGTGGGCAACAGTGATGAGAGGA...TTGATTGATCTGCATTGTGAAAATTAGGAAACCAGATGCTCCCATGTTCTCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329620.9
ENST00000412113.5
ENST00000436265.5
ENST00000543212.5
CDS-3UTR CCA 90 bp CAGCATCCAGCTCCAGTAACCATCAACGTGTACCATTATTTCATCTCTCTTCCTGTTTGCAGCAAATACTaGTTGTTCAACAGTGAGGTT +
Preference number: 4 (lower is better)
Translates to: QHPAPVTINVYHYFISLPVCSKY*LFNSEV
Trigger: AACCTCACTGTTGAACAACCAGTATTTGCTGCAAAC...AGGAAGAGAGATGAAATAATGGTACACGTTGATGGTTACTGGAGCTGGATGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436265.5
CDS-3UTR CCA 90 bp TCCTCAAAGAAGGCTTTCTCTACCTCTAGACATAGTTTTCAACAGGTGTATAATTTCCCAGCCACCATATaGAGCTGCCTGAATAGTTCC +
Preference number: 4 (lower is better)
Translates to: SSKKAFSTSRHSFQQVYNFPATI*SCLNSS
Trigger: GGAACTATTCAGGCAGCTCCATATGGTGGCTGGGAA...ATTATACACCTGTTGAAAACTATGTCTAGAGGTAGAGAAAGCCTTCTTTGAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328823.13
CDS-3UTR CCA 90 bp GACCCCACCTCAAATCTACCTGGTACAAGTATAACTAACATGAAGAGCAGAAGAGCTTTCACCATCAACTaGGCAAATTCAATGGCATCT +
Preference number: 4 (lower is better)
Translates to: DPTSNLPGTSITNMKSRRAFTIN*ANSMAS
Trigger: AGATGCCATTGAATTTGCCCAGTTGATGGTGAAAGC...TCTTCTGCTCTTCATGTTAGTTATACTTGTACCAGGTAGATTTGAGGTGGGGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329620.9
CDS-3UTR CCA 90 bp TTTTCTGGCCATGCTATTGCCTTGGTTATTCGGCAATTCATATTTCTGTCATTTTGCCCTTCCAAAGGGTaGAACAACTACCTGCGAGAA +
Preference number: 4 (lower is better)
Translates to: FSGHAIALVIRQFIFLSFCPSKG*NNYLRE
Trigger: TTCTCGCAGGTAGTTGTTCCACCCTTTGGAAGGGCA...AAATGACAGAAATATGAATTGCCGAATAACCAAGGCAATAGCATGGCCAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328823.13
CDS-3UTR CCA 90 bp ATCTTCCCACATGCATCTTTGTGCACACATGCAAGTTTTCTCGCAGGCATATTTGAATTAGCCCCACAATaGTATTCTTCCTTTAGCCAG +
Preference number: 4 (lower is better)
Translates to: IFPHASLCTHASFLAGIFELAPQ*YSSFSQ
Trigger: CTGGCTAAAGGAAGAATACCATTGTGGGGCTAATTC...AAATATGCCTGCGAGAAAACTTGCATGTGTGCACAAAGATGCATGTGGGAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328823.13
CDS-3UTR CCA 90 bp CACATTCCAGCAGACACTGAAAAGCTGAACAAGGGAAACCTTATCCCTGCTCTAGAACATGGGAGCATCTaGTTTCCTAATTTTCACAAT +
Preference number: 4 (lower is better)
Translates to: HIPADTEKLNKGNLIPALEHGSI*FPNFHN
Trigger: ATTGTGAAAATTAGGAAACCAGATGCTCCCATGTTC...TAGAGCAGGGATAAGGTTTCCCTTGTTCAGCTTTTCAGTGTCTGCTGGAATGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329620.9
ENST00000412113.5
ENST00000436265.5
ENST00000543212.5
CDS-3UTR CCA 90 bp GGGAGCATCTGGTTTCCTAATTTTCACAATGCAGATCAATCAATGACTCTAAGCTATCCCTGCTCTAGTTaGTTGAGTCTCTCCTCTCTT +
Preference number: 4 (lower is better)
Translates to: GSIWFPNFHNADQSMTLSYPCSS*LSLSSL
Trigger: AAGAGAGGAGAGACTCAACCAACTAGAGCAGGGATA...GCTTAGAGTCATTGATTGATCTGCATTGTGAAAATTAGGAAACCAGATGCTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329620.9
ENST00000412113.5
ENST00000436265.5
ENST00000543212.5
CDS-3UTR CCA 90 bp GGGAGCATCTGGTTTCCTAATTTTCACAATGCAGATCAATCAATGACTCTAAGCAACTGTACCAGACAGTaGGAGCTAACTAACAGTAGG +
Preference number: 4 (lower is better)
Translates to: GSIWFPNFHNADQSMTLSNCTRQ*ELTNSR
Trigger: CCTACTGTTAGTTAGCTCCCACTGTCTGGTACAGTT...GCTTAGAGTCATTGATTGATCTGCATTGTGAAAATTAGGAAACCAGATGCTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329620.9
CDS-3UTR CCA 90 bp TTAGGATTTGTGAGAAGCCCACCAACAAAGCAGATGGTGGTGGGGATCTTGGTAGAACATATTAATCTATaGATTGAAAAATCGGCCAGG +
Preference number: 4 (lower is better)
Translates to: LGFVRSPPTKQMVVGILVEHINL*IEKSAR
Trigger: CCTGGCCGATTTTTCAATCCATAGATTAATATGTTC...TACCAAGATCCCCACCACCATCTGCTTTGTTGGTGGGCTTCTCACAAATCCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329620.9
CDS-3UTR CCA 90 bp CTCCAGAAGACTCTCAAGGCAAAGGCCAGGAAGAATATCATACGTTTCACTTCCCTTTCTATTACCTTTTaGGTAAACCCAAATCCTGAG +
Preference number: 4 (lower is better)
Translates to: LQKTLKAKARKNIIRFTSLSITF*VNPNPE
Trigger: CTCAGGATTTGGGTTTACCCAAAAGGTAATAGAAAG...GGAAGTGAAACGTATGATATTCTTCCTGGCCTTTGCCTTGAGAGTCTTCTGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329620.9
3UTR CAA 72 bp CTCAGCATCTTGGTGCCAAATAAAATCTGGATACCTTaGCATAATCTTAGGATTTGTGAGAAGCCCACCAAC +
Preference number: 4 (lower is better)
Translates to: LSILVPNKIWIP*HNLRICEKPTN
Trigger: GTTGGTGGGCTTCTCACAAATCCTAAGATTATGCAAAGGTATCCAGATTTTATTTGGCACCAAGATGCTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329620.9
CDS-3UTR TCA 90 bp TTAAGAAAGGCTGTCCTTGAGAACATGGGAGCATCTGGTTTCCTAATTTTCACATGGAGCATGAAGTTATaGAAATCACCCGGTATGAAG +
Preference number: 4 (lower is better)
Translates to: LRKAVLENMGASGFLIFTWSMKL*KSPGMK
Trigger: CTTCATACCGGGTGATTTTCATAACTTCATGCTCCA...TGTGAAAATTAGGAAACCAGATGCTCCCATGTTCTCAAGGACAGCCTTTCTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329620.9
ENST00000412113.5
ENST00000436265.5
CDS-3UTR TCA 90 bp TTTTCTGGCCATGCTATTGCCTTGGTTATTCGGCAATTCATATTTCTGTCATTTGGAAGACAGGAACCTTaGATGCGAGTGTGGAAAAAG +
Preference number: 4 (lower is better)
Translates to: FSGHAIALVIRQFIFLSFGRQEP*MRVWKK
Trigger: CTTTTTCCACACTCGCATTCAAGGTTCCTGTCTTCC...AAATGACAGAAATATGAATTGCCGAATAACCAAGGCAATAGCATGGCCAGAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328823.13
CDS-3UTR TCA 90 bp TTAAGAAAGGCTGTCCTTGAGAACATGGGAGCATCTGGTTTCCTAATTTTCACATGCTCTTCTGATGTGTaGGCTAGAGTATCATCACAT +
Preference number: 4 (lower is better)
Translates to: LRKAVLENMGASGFLIFTCSSDV*ARVSSH
Trigger: ATGTGATGATACTCTAGCTCACACATCAGAAGAGCA...TGTGAAAATTAGGAAACCAGATGCTCCCATGTTCTCAAGGACAGCCTTTCTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436265.5
CDS-3UTR GCA 90 bp TTAAGAAAGGCTGTCCTTGAGAACATGGGAGCATCTGGTTTCCTAATTTTCACATTTAGGGTACCTCTTTaGTTGGTGAGTCTTCAAGGT +
Preference number: 4 (lower is better)
Translates to: LRKAVLENMGASGFLIFTFRVPL*LVSLQG
Trigger: ACCTTGAAGACTCACCAAGCAAAGAGGTACCCTAAA...TGTGAAAATTAGGAAACCAGATGCTCCCATGTTCTCAAGGACAGCCTTTCTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329620.9
ENST00000412113.5
ENST00000436265.5
ENST00000543212.5
CDS-3UTR GCA 90 bp CCTTTGCATAATCTTAGGATTTGTGAGAAGCCCACCAACAAAGCAGATGGTGGTTTCTCAGCATCTTGGTaGCAAATAAAATCTGGATAC +
Preference number: 4 (lower is better)
Translates to: PLHNLRICEKPTNKADGGFSASW*QIKSGY
Trigger: GTATCCAGATTTTATTTGGCACCAAGATGCTGAGAA...ACCACCATCTGCTTTGTTGGTGGGCTTCTCACAAATCCTAAGATTATGCAAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329620.9
CDS-3UTR CCA 90 bp TCTCAAGGCAAAGGCCAGGAAGAATATCATACGTTTCACTTCCTACCTGACAATGTTTGCAGCAAATACTaGTTGTTCAACAGTGAGGTT +
Preference number: 4 (lower is better)
Translates to: SQGKGQEEYHTFHFLPDNVCSKY*LFNSEV
Trigger: AACCTCACTGTTGAACAACCAGTATTTGCTGCAAAC...ATTGTCAGGTAGGAAGTGAAACGTATGATATTCTTCCTGGCCTTTGCCTTGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329620.9
ENST00000412113.5
CDS-3UTR CCA 90 bp AAGGCAAAGGCCAGGAAGAATATCATACGTTTCACTTCCTACCTGACAATGAGGGAACATGGGAGCATCTaGTTTCCTAATTTTCACAAT +
Preference number: 4 (lower is better)
Translates to: KAKARKNIIRFTSYLTMREHGSI*FPNFHN
Trigger: ATTGTGAAAATTAGGAAACCAGATGCTCCCATGTTC...CCTCATTGTCAGGTAGGAAGTGAAACGTATGATATTCTTCCTGGCCTTTGCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329620.9
ENST00000412113.5
CDS-3UTR CCA 90 bp CATCCAGCTCCAGTAACCATCAACGTGTACCATTATTTCATCTCTCTTCCTGCAGAACATGGGAGCATCTaGTTTCCTAATTTTCACAAT +
Preference number: 4 (lower is better)
Translates to: HPAPVTINVYHYFISLPAEHGSI*FPNFHN
Trigger: ATTGTGAAAATTAGGAAACCAGATGCTCCCATGTTC...TGCAGGAAGAGAGATGAAATAATGGTACACGTTGATGGTTACTGGAGCTGGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436265.5
CDS-3UTR TCA 90 bp TTCTCCTTATCAACAAGTCTTAGAAATTTCTGCATACGTAGTATGGGCATACCATCACCCGGTATGAAGTaGGAAACAATGTTCCTGTCT +
Preference number: 4 (lower is better)
Translates to: FSLSTSLRNFCIRSMGIPSPGMK*ETMFLS
Trigger: AGACAGGAACATTGTTTCTCACTTCATACCGGGTGA...TGGTATGCCCATACTACGTATGCAGAAATTTCTAAGACTTGTTGATAAGGAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328823.13
CDS-3UTR TCA 90 bp AACATCTTTTCAAACGTTTTCTGGCCATGCTATTGCCTTGGTTATTCGGCAATTTACCTCTTTGCTTGGTaGGTCTTCAAGGTTTACATC +
Preference number: 4 (lower is better)
Translates to: NIFSNVFWPCYCLGYSAIYLFAW*VFKVYI
Trigger: GATGTAAACCTTGAAGACTCACCAAGCAAAGAGGTA...AATTGCCGAATAACCAAGGCAATAGCATGGCCAGAAAACGTTTGAAAAGATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328823.13
CDS-3UTR GCA 90 bp AGCCCACCAACAAAGCAGATGGTGGTGGGGATCTTGGTAACAGAAATAAATTTATCCCTTAATGAAGTTTaGAGCAAATACTGGTTGTTC +
Preference number: 4 (lower is better)
Translates to: SPPTKQMVVGILVTEINLSLNEV*SKYWLF
Trigger: GAACAACCAGTATTTGCTGCAAACTTCATTAAGGGA...TAAATTTATTTCTGTTACCAAGATCCCCACCACCATCTGCTTTGTTGGTGGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329620.9
CDS-3UTR CCA 90 bp TTTTGGTCTCCTCAAAGAAGGCTTTCTCTACCTCTAGACATAGTTTTCAACAGGGTTTGCAGCAAATACTaGTTGTTCAACAGTGAGGTT +
Preference number: 4 (lower is better)
Translates to: FWSPQRRLSLPLDIVFNRVCSKY*LFNSEV
Trigger: AACCTCACTGTTGAACAACCAGTATTTGCTGCAAAC...CCTGTTGAAAACTATGTCTAGAGGTAGAGAAAGCCTTCTTTGAGGAGACCAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328823.13
CDS-3UTR CCA 90 bp TGTTTTCTCATCTCAGGTTGCATTTCCCTAACACTAGTCAAGCTGAACATCTTTGCTTTCACCATCAACTaGGCAAATTCAATGGCATCT +
Preference number: 4 (lower is better)
Translates to: CFLISGCISLTLVKLNIFAFTIN*ANSMAS
Trigger: AGATGCCATTGAATTTGCCCAGTTGATGGTGAAAGC...AAAGATGTTCAGCTTGACTAGTGTTAGGGAAATGCAACCTGAGATGAGAAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328823.13
CDS-3UTR CCA 90 bp CTTGAGAACATGGGAGCATCTGGTTTCCTAATTTTCACAATGCAGATCAATCAAGTTTGCAGCAAATACTaGTTGTTCAACAGTGAGGTT +
Preference number: 4 (lower is better)
Translates to: LENMGASGFLIFTMQINQVCSKY*LFNSEV
Trigger: AACCTCACTGTTGAACAACCAGTATTTGCTGCAAAC...TTGATTGATCTGCATTGTGAAAATTAGGAAACCAGATGCTCCCATGTTCTCAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329620.9
ENST00000412113.5
ENST00000436265.5
ENST00000543212.5
CDS-3UTR CCA 90 bp TGTTTTCTCATCTCAGGTTGCATTTCCCTAACACTAGTCAAGCTGAACATCTTTTTTTCAAACGTTTTCTaGCCATGCTATTGCCTTGGT +
Preference number: 4 (lower is better)
Translates to: CFLISGCISLTLVKLNIFFSNVF*PCYCLG
Trigger: ACCAAGGCAATAGCATGGCCAGAAAACGTTTGAAAA...AAAGATGTTCAGCTTGACTAGTGTTAGGGAAATGCAACCTGAGATGAGAAAACA
39% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000328823.13
3UTR CAA 72 bp GCTGAACATCTTTTCAAACGTTTTCTGGCCATGCTATaGCCTTGGTTATTCGGCAATTCATATTTCTGTCAT +
Preference number: 4 (lower is better)
Translates to: AEHLFKRFLAML*PWLFGNSYFCH
Trigger: ATGACAGAAATATGAATTGCCGAATAACCAAGGCAATAGCATGGCCAGAAAACGTTTGAAAAGATGTTCAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328823.13
3UTR CAA 72 bp AAGCAGTCTGATGACCAGAAGAAACTTCTCAGCATCTaGGTGCCAAATAAAATCTGGATACCTTTGCATAAT +
Preference number: 4 (lower is better)
Translates to: KQSDDQKKLLSI*VPNKIWIPLHN
Trigger: ATTATGCAAAGGTATCCAGATTTTATTTGGCACCAAGATGCTGAGAAGTTTCTTCTGGTCATCAGACTGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329620.9
CDS-3UTR TCA 90 bp TCTTTGGAGATAAAAATGTTTTCTCATCTCAGGTTGCATTTCCCTAACACTAGTTGGAGCATGAAGTTATaGAAATCACCCGGTATGAAG +
Preference number: 4 (lower is better)
Translates to: SLEIKMFSHLRLHFPNTSWSMKL*KSPGMK
Trigger: CTTCATACCGGGTGATTTTCATAACTTCATGCTCCA...ACTAGTGTTAGGGAAATGCAACCTGAGATGAGAAAACATTTTTATCTCCAAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328823.13
CDS-3UTR TCA 90 bp TCTTTGGAGATAAAAATGTTTTCTCATCTCAGGTTGCATTTCCCTAACACTAGTATCACTGATGGAGCATaGAGTTATGAAAATCACCCG +
Preference number: 4 (lower is better)
Translates to: SLEIKMFSHLRLHFPNTSITDGA*SYENHP
Trigger: CGGGTGATTTTCATAACTTCATGCTCCATCAGTGAT...ACTAGTGTTAGGGAAATGCAACCTGAGATGAGAAAACATTTTTATCTCCAAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328823.13
CDS-3UTR GCA 90 bp AATATAATGAAATCTTCCCACATGCATCTTTGTGCACACATGCAAGTTTTCTCGTTTCTCATCTCAGGTTaGATTTCCCTAACACTAGTC +
Preference number: 4 (lower is better)
Translates to: NIMKSSHMHLCAHMQVFSFLISG*ISLTLV
Trigger: GACTAGTGTTAGGGAAATGCAACCTGAGATGAGAAA...CGAGAAAACTTGCATGTGTGCACAAAGATGCATGTGGGAAGATTTCATTATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328823.13
CDS-3UTR GCA 90 bp AATATAATGAAATCTTCCCACATGCATCTTTGTGCACACATGCAAGTTTTCTCGAGTCTTAGAAATTTCTaGATACGTAGTATGGGCATA +
Preference number: 4 (lower is better)
Translates to: NIMKSSHMHLCAHMQVFSSLRNF*IRSMGI
Trigger: TATGCCCATACTACGTATGCAGAAATTTCTAAGACT...CGAGAAAACTTGCATGTGTGCACAAAGATGCATGTGGGAAGATTTCATTATATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328823.13
CDS-3UTR CCA 90 bp AATATAATGAAATCTTCCCACATGCATCTTTGTGCACACATGCAAGTTTTCTCGTTTATTTGTTGGTTTTaGTCTCCTCAAAGAAGGCTT +
Preference number: 4 (lower is better)
Translates to: NIMKSSHMHLCAHMQVFSFICWF*SPQRRL
Trigger: AAGCCTTCTTTGAGGAGACCAAAACCAACAAATAAA...CGAGAAAACTTGCATGTGTGCACAAAGATGCATGTGGGAAGATTTCATTATATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328823.13
3UTR CAA 72 bp AACAATGAATATAATGAAATCTTCCCACATGCATCTTaGTGCACACATGCAAGTTTTCTCGCAGGCATATTT +
Preference number: 4 (lower is better)
Translates to: NNEYNEIFPHAS*CTHASFLAGIF
Trigger: AAATATGCCTGCGAGAAAACTTGCATGTGTGCACAAAGATGCATGTGGGAAGATTTCATTATATTCATTGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328823.13
3UTR CAA 72 bp AAATGTTTCTTGAATGAGGATGGGAAGACAGGAACCTaGAATGCGAGTGTGGAAAAAGTTATGTTTAAAAAT +
Preference number: 4 (lower is better)
Translates to: KCFLNEDGKTGT*NASVEKVMFKN
Trigger: ATTTTTAAACATAACTTTTTCCACACTCGCATTCAAGGTTCCTGTCTTCCCATCCTCATTCAAGAAACATTT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000328823.13
3UTR CAA 72 bp AAATCTTTGGAGATAAAAATGTTTTCTCATCTCAGGTaGCATTTCCCTAACACTAGTCAAGCTGAACATCTT +
Preference number: 4 (lower is better)
Translates to: KSLEIKMFSHLR*HFPNTSQAEHL
Trigger: AAGATGTTCAGCTTGACTAGTGTTAGGGAAATGCAACCTGAGATGAGAAAACATTTTTATCTCCAAAGATTT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328823.13
CDS TCA 90 bp TCACCGTTAGGGATGAGGGCTCCGCGGCGGTTCTCGGTGTGGCTCTaGTTCACCGCCATCTTGCTTCGGGCCTCCTGCCGCCCCGTAGAT +
Preference number: 5 (lower is better)
Translates to: SPLGMRAPRRFSVWL*FTAILLRASCRPVD
Trigger: ATCTACGGGGCGGCAGGAGGCCCGAAGCAAGATGGCGGTGAATCAGAGCCACACCGAGAACCGCCGCGGAGCCCTCATCCCTAACGGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328823.13
ENST00000329620.9
ENST00000412113.5
ENST00000436265.5
ENST00000475341.5
CDS-3UTR CAA 90 bp CTCTCCTCTCTTCCTCTCATCACTGTTGCCCACGTACTGACTTCCTTAAGAAAGAGGATAAGGAGGCCTTaGGGGTCCTACTCCCCAGTT +
Preference number: 5 (lower is better)
Translates to: LSSLPLITVAHVLTSLRKRIRRP*GSYSPV
Trigger: AACTGGGGAGTAGGACCCCAAAGGCCTCCTTATCCT...CTTTCTTAAGGAAGTCAGTACGTGGGCAACAGTGATGAGAGGAAGAGAGGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329620.9
CDS-3UTR CAA 90 bp GAACAAGGGAAACCTTATCCCTGCTCTAGTTGGTTGAGTCTCTCCTCTCTTCCTCCCTGCTCTAGTTGGTaGAGTCTCTCCTCTCTTCCT +
Preference number: 5 (lower is better)
Translates to: EQGKPYPCSSWLSLSSLPPCSSW*SLSSLP
Trigger: AGGAAGAGAGGAGAGACTCAACCAACTAGAGCAGGG...AGGAAGAGAGGAGAGACTCAACCAACTAGAGCAGGGATAAGGTTTCCCTTGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329620.9
ENST00000412113.5
ENST00000436265.5
ENST00000543212.5
CDS-3UTR CAA 90 bp TTAGGATTTGTGAGAAGCCCACCAACAAAGCAGATGGTGGTGGGGATCTTGGTAAGTCACAGCCTTTGGTaGTACTGGGGCAGTTTGGTG +
Preference number: 5 (lower is better)
Translates to: LGFVRSPPTKQMVVGILVSHSLW*YWGSLV
Trigger: CACCAAACTGCCCCAGTACAACCAAAGGCTGTGACT...TACCAAGATCCCCACCACCATCTGCTTTGTTGGTGGGCTTCTCACAAATCCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329620.9
CDS-3UTR CAA 90 bp AAGCTTTTAGACTTGACGGGACTGCCAGGACTGGATAGTGGCTGTTTCAGAAGCACACAGTCACAGCCTTaGGTTGTACTGGGGCAGTTT +
Preference number: 5 (lower is better)
Translates to: KLLDLTGLPGLDSGCFRSTQSQP*VVLGQF
Trigger: AAACTGCCCCAGTACAACCAAAGGCTGTGACTGTGT...GCTTCTGAAACAGCCACTATCCAGTCCTGGCAGTCCCGTCAAGTCTAAAAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329620.9
CDS-3UTR CAA 90 bp CACATTCCAGCAGACACTGAAAAGCTGAACAAGGGAAACCTTATCCCTGCTCTATCTAGCAGTCCATGGTaGTCTGCCCCACCCTCTTCA +
Preference number: 5 (lower is better)
Translates to: HIPADTEKLNKGNLIPALSSSPW*SAPPSS
Trigger: TGAAGAGGGTGGGGCAGACAACCATGGACTGCTAGA...TAGAGCAGGGATAAGGTTTCCCTTGTTCAGCTTTTCAGTGTCTGCTGGAATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329620.9
ENST00000412113.5
CDS-3UTR CAA 90 bp ATTCCAGCAGACACTGAAAAGCTGAACAAGGGAAACCTTATCCCTGCTCTAGTTTCTAGCAGTCCATGGTaGTCTGCCCCACCCTCTTCA +
Preference number: 5 (lower is better)
Translates to: IPADTEKLNKGNLIPALVSSSPW*SAPPSS
Trigger: TGAAGAGGGTGGGGCAGACAACCATGGACTGCTAGA...AACTAGAGCAGGGATAAGGTTTCCCTTGTTCAGCTTTTCAGTGTCTGCTGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329620.9
ENST00000412113.5
CDS TCA 90 bp ACTGAAAAGCTGAACAAGGGAAACCTTATCCCTGCTCTAGTTGGTTaGGTCTCTCCTCTCTTCCTCTCATCACTGTTGCCCACGTACTGT +
Preference number: 5 (lower is better)
Translates to: TEKLNKGNLIPALVG*VSPLFLSSLLPTYC
Trigger: ACAGTACGTGGGCAACAGTGATGAGAGGAAGAGAGGAGAGACTCAACCAACTAGAGCAGGGATAAGGTTTCCCTTGTTCAGCTTTTCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470812.1
CDS-3UTR CAA 90 bp ATTCCAGCAGACACTGAAAAGCTGAACAAGGGAAACCTTATCCCTGCTCTAGTTCCCTGCTCTAGTTGGTaGAGTCTCTCCTCTCTTCCT +
Preference number: 5 (lower is better)
Translates to: IPADTEKLNKGNLIPALVPCSSW*SLSSLP
Trigger: AGGAAGAGAGGAGAGACTCAACCAACTAGAGCAGGG...AACTAGAGCAGGGATAAGGTTTCCCTTGTTCAGCTTTTCAGTGTCTGCTGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329620.9
ENST00000412113.5
ENST00000436265.5
ENST00000543212.5
CDS-3UTR CAA 90 bp CGTCCTCCTTATCCTGACTTCAATTTTAGGGTACCTCTTTGCTTGGTGAGTCTTCCCTGCTCTAGTTGGTaGAGTCTCTCCTCTCTTCCT +
Preference number: 5 (lower is better)
Translates to: RPPYPDFNFRVPLCLVSLPCSSW*SLSSLP
Trigger: AGGAAGAGAGGAGAGACTCAACCAACTAGAGCAGGG...AAGACTCACCAAGCAAAGAGGTACCCTAAAATTGAAGTCAGGATAAGGAGGACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329620.9
ENST00000412113.5
ENST00000436265.5
ENST00000543212.5
CDS-3UTR CAA 90 bp AAGCTTTTAGACTTGACGGGACTGCCAGGACTGGATAGTGGCTGTTTCAGAAGCAAACTGTGGCTCCACTaGGTTCTATCCTTACACAGT +
Preference number: 5 (lower is better)
Translates to: KLLDLTGLPGLDSGCFRSKLWLH*VLSLHS
Trigger: ACTGTGTAAGGATAGAACCAAGTGGAGCCACAGTTT...GCTTCTGAAACAGCCACTATCCAGTCCTGGCAGTCCCGTCAAGTCTAAAAGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329620.9
CDS-3UTR CAA 90 bp CGTCCTCCTTATCCTGACTTCAATTTTAGGGTACCTCTTTGCTTGGTGAGTCTTGTAAACAGGTACCCTTaGCACAGGAGAACATGGTGG +
Preference number: 5 (lower is better)
Translates to: RPPYPDFNFRVPLCLVSLVNRYP*HRRTWW
Trigger: CCACCATGTTCTCCTGTGCAAAGGGTACCTGTTTAC...AAGACTCACCAAGCAAAGAGGTACCCTAAAATTGAAGTCAGGATAAGGAGGACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329620.9
CDS-3UTR CAA 90 bp GACCCCACCTCAAATCTACCTGGTACAAGTATAACTAACATGAAGAGCAGAAGATTGTACTGGGGCAGTTaGGTGGACCAGGTAAACAGG +
Preference number: 5 (lower is better)
Translates to: DPTSNLPGTSITNMKSRRLYWGS*VDQVNR
Trigger: CCTGTTTACCTGGTCCACCAAACTGCCCCAGTACAA...TCTTCTGCTCTTCATGTTAGTTATACTTGTACCAGGTAGATTTGAGGTGGGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329620.9
CDS-3UTR CAA 90 bp GGGAGCATCTGGTTTCCTAATTTTCACAATGCAGATCAATCAATGACTCTAAGCCCCTGCTCTAGTTGGTaGAGTCTCTCCTCTCTTCCT +
Preference number: 5 (lower is better)
Translates to: GSIWFPNFHNADQSMTLSPCSSW*SLSSLP
Trigger: AGGAAGAGAGGAGAGACTCAACCAACTAGAGCAGGG...GCTTAGAGTCATTGATTGATCTGCATTGTGAAAATTAGGAAACCAGATGCTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329620.9
ENST00000412113.5
ENST00000436265.5
ENST00000543212.5
CDS-3UTR CAA 90 bp AAGGCTGTCCTTGAGAACATGGGAGCATCTGGTTTCCTAATTTTCACAATGCAGAATTGGACTGAGCCTTaGGGGGAAACAACTGTACCA +
Preference number: 5 (lower is better)
Translates to: KAVLENMGASGFLIFTMQNWTEP*GETTVP
Trigger: TGGTACAGTTGTTTCCCCCAAAGGCTCAGTCCAATT...CTGCATTGTGAAAATTAGGAAACCAGATGCTCCCATGTTCTCAAGGACAGCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329620.9
CDS GCA 90 bp AGAGTCCTTTTCTTTCTAGAGGGACAGCTGGAGTACAGGAGTTTATaGACAGTACCTAAGTTCAAATCCAAATCCAAGCTCTCCCACATG +
Preference number: 5 (lower is better)
Translates to: RVLFFLEGQLEYRSL*TVPKFKSKSKLSHM
Trigger: CATGTGGGAGAGCTTGGATTTGGATTTGAACTTAGGTACTGTGCATAAACTCCTGTACTCCAGCTGTCCCTCTAGAAAGAAAAGGACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461730.1
CDS CCA 90 bp AGTGGAAATCCTCGGGCAGCAGCAGAGGCAGCTTTCACCATCAACTaGGCAAATTCAATGGCATCTCCATTTCTGAAGACTAATTTAAAA +
Preference number: 5 (lower is better)
Translates to: SGNPRAAAEAAFTIN*ANSMASPFLKTNLK
Trigger: TTTTAAATTAGTCTTCAGAAATGGAGATGCCATTGAATTTGCCCAGTTGATGGTGAAAGCTGCCTCTGCTGCTGCCCGAGGATTTCCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328823.13
ENST00000329620.9
ENST00000436265.5
ENST00000445185.1
ENST00000475341.5
ENST00000543212.5
CDS-3UTR CAA 90 bp CCTTTGCATAATCTTAGGATTTGTGAGAAGCCCACCAACAAAGCAGATGGTGGTTGCAGCAAATACTGGTaGTTCAACAGTGAGGTTCGT +
Preference number: 5 (lower is better)
Translates to: PLHNLRICEKPTNKADGGCSKYW*FNSEVR
Trigger: ACGAACCTCACTGTTGAACAACCAGTATTTGCTGCA...ACCACCATCTGCTTTGTTGGTGGGCTTCTCACAAATCCTAAGATTATGCAAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329620.9
CDS-3UTR CAA 90 bp TGTTTTCTCATCTCAGGTTGCATTTCCCTAACACTAGTCAAGCTGAACATCTTTCCTTCCCCCATAAGATaGCCCTTCCAAAGGGTGGAA +
Preference number: 5 (lower is better)
Translates to: CFLISGCISLTLVKLNIFPSPIR*PFQRVE
Trigger: TTCCACCCTTTGGAAGGGCAATCTTATGGGGGAAGG...AAAGATGTTCAGCTTGACTAGTGTTAGGGAAATGCAACCTGAGATGAGAAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328823.13
CDS-3UTR CAA 90 bp CTGAGTCGTCCTCCTTATCCTGACTTCAATTTTAGGGTACCTCTTTGCTTGGTGTTCCCACATGCATCTTaGTGCACACATGCAAGTTTT +
Preference number: 5 (lower is better)
Translates to: LSRPPYPDFNFRVPLCLVFPHAS*CTHASF
Trigger: AAAACTTGCATGTGTGCACAAAGATGCATGTGGGAA...CACCAAGCAAAGAGGTACCCTAAAATTGAAGTCAGGATAAGGAGGACGACTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328823.13
CDS-3UTR CAA 90 bp GAACAAGGGAAACCTTATCCCTGCTCTAGTTGGTTGAGTCTCTCCTCTCTTCCTAAAAACCAGGGTCCTTaGAATATACAGGACACAAAG +
Preference number: 5 (lower is better)
Translates to: EQGKPYPCSSWLSLSSLPKNQGP*NIQDTK
Trigger: CTTTGTGTCCTGTATATTCAAAGGACCCTGGTTTTT...AGGAAGAGAGGAGAGACTCAACCAACTAGAGCAGGGATAAGGTTTCCCTTGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329620.9
CDS-3UTR CAA 90 bp ATTCCAGCAGACACTGAAAAGCTGAACAAGGGAAACCTTATCCCTGCTCTAGTTAGTATAGTTTCTGTATaGCAGCTGGGGAAGAGACAG +
Preference number: 5 (lower is better)
Translates to: IPADTEKLNKGNLIPALVSIVSV*QLGKRQ
Trigger: CTGTCTCTTCCCCAGCTGCAATACAGAAACTATACT...AACTAGAGCAGGGATAAGGTTTCCCTTGTTCAGCTTTTCAGTGTCTGCTGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329620.9
CDS-3UTR CAA 90 bp ATTCCAGCAGACACTGAAAAGCTGAACAAGGGAAACCTTATCCCTGCTCTAGTTATAGACCCTTTCCCTTaGACAGAACCCCTTCTTTCT +
Preference number: 5 (lower is better)
Translates to: IPADTEKLNKGNLIPALVIDPFP*TEPLLS
Trigger: AGAAAGAAGGGGTTCTGTCAAAGGGAAAGGGTCTAT...AACTAGAGCAGGGATAAGGTTTCCCTTGTTCAGCTTTTCAGTGTCTGCTGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329620.9
CDS-3UTR CAA 90 bp GAACAAGGGAAACCTTATCCCTGCTCTAGTTGGTTGAGTCTCTCCTCTCTTCCTATGGTGGTGGGGATCTaGGTAACAGAAATAAATTTA +
Preference number: 5 (lower is better)
Translates to: EQGKPYPCSSWLSLSSLPMVVGI*VTEINL
Trigger: TAAATTTATTTCTGTTACCAAGATCCCCACCACCAT...AGGAAGAGAGGAGAGACTCAACCAACTAGAGCAGGGATAAGGTTTCCCTTGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329620.9
CDS CCA 90 bp TTAGCCTCTCGAATAGGTGGGACTACAGATGTGCACCACTATCTCTaGTTCTTTAAAGTAGTTTCTATCCAGGAAGCTAGGGTACTAATA +
Preference number: 5 (lower is better)
Translates to: LASRIGGTTDVHHYL*FFKVVSIQEARVLI
Trigger: TATTAGTACCCTAGCTTCCTGGATAGAAACTACTTTAAAGAACCAGAGATAGTGGTGCACATCTGTAGTCCCACCTATTCGAGAGGCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461730.1
CDS CCA 90 bp AAAAGCGCCAGATCCTATGACCCATGTTTAAGATCCAATATTGCCTaGATTCCCTGTTTGGAAACTTTAGAGAGGTTTACAGCCACACTT +
Preference number: 5 (lower is better)
Translates to: KSARSYDPCLRSNIA*IPCLETLERFTATL
Trigger: AAGTGTGGCTGTAAACCTCTCTAAAGTTTCCAAACAGGGAATCCAGGCAATATTGGATCTTAAACATGGGTCATAGGATCTGGCGCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470812.1
CDS-3UTR CAA 90 bp TTAAGAAAGGCTGTCCTTGAGAACATGGGAGCATCTGGTTTCCTAATTTTCACATGCAGCAAATACTGGTaGTTCAACAGTGAGGTTCGT +
Preference number: 5 (lower is better)
Translates to: LRKAVLENMGASGFLIFTCSKYW*FNSEVR
Trigger: ACGAACCTCACTGTTGAACAACCAGTATTTGCTGCA...TGTGAAAATTAGGAAACCAGATGCTCCCATGTTCTCAAGGACAGCCTTTCTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329620.9
ENST00000412113.5
ENST00000436265.5
ENST00000543212.5
CDS-3UTR CAA 90 bp TCCCACATGCATCTTTGTGCACACATGCAAGTTTTCTCGCAGGCATATTTTAAAAGGGTACCTCTTTGCTaGGTGAGTCTTCAAGGTTTA +
Preference number: 5 (lower is better)
Translates to: SHMHLCAHMQVFSQAYFKRVPLC*VSLQGL
Trigger: TAAACCTTGAAGACTCACCAAGCAAAGAGGTACCCT...TTTAAAATATGCCTGCGAGAAAACTTGCATGTGTGCACAAAGATGCATGTGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328823.13
CDS-3UTR CAA 90 bp TCTCAAGGCAAAGGCCAGGAAGAATATCATACGTTTCACTTCCTACCTGACAATCTAATCCCCAAATATTaGCCAGAGATCAGTTACTCG +
Preference number: 5 (lower is better)
Translates to: SQGKGQEEYHTFHFLPDNLIPKY*PEISYS
Trigger: CGAGTAACTGATCTCTGGCAAATATTTGGGGATTAG...ATTGTCAGGTAGGAAGTGAAACGTATGATATTCTTCCTGGCCTTTGCCTTGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329620.9
CDS GCA 90 bp CTGAGTCGTCCTCCTTATCCTGACTTCAATTTTAGGGTACCTCTTTaGTTGGTGAGTCTTCAAGGTTTACATCTTAGAAGGTTAAGAATG +
Preference number: 5 (lower is better)
Translates to: LSRPPYPDFNFRVPL*LVSLQGLHLRRLRM
Trigger: CATTCTTAACCTTCTAAGATGTAAACCTTGAAGACTCACCAAGCAAAGAGGTACCCTAAAATTGAAGTCAGGATAAGGAGGACGACTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328823.13
ENST00000329620.9
ENST00000412113.5
ENST00000436265.5
ENST00000487176.1
ENST00000543212.5
CDS-3UTR CAA 90 bp CTTGAGAACATGGGAGCATCTGGTTTCCTAATTTTCACAATGCAGATCAATCAATGCAGCAAATACTGGTaGTTCAACAGTGAGGTTCGT +
Preference number: 5 (lower is better)
Translates to: LENMGASGFLIFTMQINQCSKYW*FNSEVR
Trigger: ACGAACCTCACTGTTGAACAACCAGTATTTGCTGCA...TTGATTGATCTGCATTGTGAAAATTAGGAAACCAGATGCTCCCATGTTCTCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329620.9
ENST00000412113.5
ENST00000436265.5
ENST00000543212.5
CDS-3UTR CAA 90 bp CCTCAGCAAAGCAAAAACCAGGGTCCTTTGAATATACAGGACACAAAGCTCTTCATATTAATCTATGGATaGAAAAATCGGCCAGGCACA +
Preference number: 5 (lower is better)
Translates to: PQQSKNQGPLNIQDTKLFILIYG*KNRPGT
Trigger: TGTGCCTGGCCGATTTTTCAATCCATAGATTAATAT...GAAGAGCTTTGTGTCCTGTATATTCAAAGGACCCTGGTTTTTGCTTTGCTGAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000329620.9
CDS-3UTR CAA 90 bp TCCTCAAAGAAGGCTTTCTCTACCTCTAGACATAGTTTTCAACAGGTGTATAATTGCAGCAAATACTGGTaGTTCAACAGTGAGGTTCGT +
Preference number: 5 (lower is better)
Translates to: SSKKAFSTSRHSFQQVYNCSKYW*FNSEVR
Trigger: ACGAACCTCACTGTTGAACAACCAGTATTTGCTGCA...ATTATACACCTGTTGAAAACTATGTCTAGAGGTAGAGAAAGCCTTCTTTGAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328823.13
CDS-3UTR CAA 90 bp ACTATAGTATATGCTCCCTACAACTTGCTTTTCTCCTTATCAACAAGTCTTAGAGGGAAGACAGGAACCTaGAATGCGAGTGTGGAAAAA +
Preference number: 5 (lower is better)
Translates to: TIVYAPYNLLFSLSTSLRGKTGT*NASVEK
Trigger: TTTTTCCACACTCGCATTCAAGGTTCCTGTCTTCCC...TCTAAGACTTGTTGATAAGGAGAAAAGCAAGTTGTAGGGAGCATATACTATAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328823.13
CDS-3UTR CAA 90 bp TCTTTGGAGATAAAAATGTTTTCTCATCTCAGGTTGCATTTCCCTAACACTAGTTTTTATTTGTTGGTTTaGGTCTCCTCAAAGAAGGCT +
Preference number: 5 (lower is better)
Translates to: SLEIKMFSHLRLHFPNTSFYLLV*VSSKKA
Trigger: AGCCTTCTTTGAGGAGACCAAAACCAACAAATAAAA...ACTAGTGTTAGGGAAATGCAACCTGAGATGAGAAAACATTTTTATCTCCAAAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000328823.13
CDS-3UTR CAA 90 bp AACAATGAATATAATGAAATCTTCCCACATGCATCTTTGTGCACACATGCAAGTTCATGCTTTTATTTGTaGGTTTTGGTCTCCTCAAAG +
Preference number: 5 (lower is better)
Translates to: NNEYNEIFPHASLCTHASSCFYL*VLVSSK
Trigger: CTTTGAGGAGACCAAAACCAACAAATAAAAGCATGA...ACTTGCATGTGTGCACAAAGATGCATGTGGGAAGATTTCATTATATTCATTGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328823.13
CDS TCA 72 bp GGGATGAGGGCTCCGCGGCGGTTCTCGGTGTGGCTCTaGTTCACCGCCATCTTGCTTCGGGCCTCCTGCCGC +
Preference number: 6 (lower is better)
Translates to: GMRAPRRFSVWL*FTAILLRASCR
Trigger: GCGGCAGGAGGCCCGAAGCAAGATGGCGGTGAATCAGAGCCACACCGAGAACCGCCGCGGAGCCCTCATCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000328823.13
ENST00000329620.9
ENST00000412113.5
ENST00000436265.5
ENST00000445185.1
ENST00000461730.1
ENST00000475341.5
CDS CCA 72 bp CCTCGGGCAGCAGCAGAGGCAGCTTTCACCATCAACTaGGCAAATTCAATGGCATCTCCATTTCTGAAGACT +
Preference number: 6 (lower is better)
Translates to: PRAAAEAAFTIN*ANSMASPFLKT
Trigger: AGTCTTCAGAAATGGAGATGCCATTGAATTTGCCCAGTTGATGGTGAAAGCTGCCTCTGCTGCTGCCCGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328823.13
ENST00000329620.9
ENST00000436265.5
ENST00000445185.1
ENST00000475341.5
ENST00000543212.5
CDS TCA 72 bp GTAGCTTGTCCTTCCCAGCCACCATATGGAGCTGCCTaGATAGTTCCCTTAATGAAGTTTGCAGCAAATACC +
Preference number: 6 (lower is better)
Translates to: VACPSQPPYGAA*IVPLMKFAANT
Trigger: GGTATTTGCTGCAAACTTCATTAAGGGAACTATTCAGGCAGCTCCATATGGTGGCTGGGAAGGACAAGCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445185.1
CDS TCA 72 bp GTAGCTTGTCCTTCCCAGCCACCATATGGAGCTGCCTaGATAGTTCCCTTAATGAAGTTTGCAGCAAATACT +
Preference number: 6 (lower is better)
Translates to: VACPSQPPYGAA*IVPLMKFAANT
Trigger: AGTATTTGCTGCAAACTTCATTAAGGGAACTATTCAGGCAGCTCCATATGGTGGCTGGGAAGGACAAGCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328823.13
ENST00000329620.9
ENST00000412113.5
ENST00000436265.5
ENST00000543212.5
CDS CAA 72 bp CCATGTTTAAGATCCAATATTGCCTGGATTCCCTGTTaGGAAACTTTAGAGAGGTTTACAGCCACACTTTCC +
Preference number: 6 (lower is better)
Translates to: PCLRSNIAWIPC*ETLERFTATLS
Trigger: GGAAAGTGTGGCTGTAAACCTCTCTAAAGTTTCCAAACAGGGAATCCAGGCAATATTGGATCTTAAACATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470812.1
CDS CAA 90 bp AGTCGTCCTCCTTATCCTGACTTCAATTTTAGGGTACCTCTTTGCTaGGTGAGTCTTCAAGGTTTACATCTTAGAAGGTTAAGAATGGAC +
Preference number: 6 (lower is better)
Translates to: SRPPYPDFNFRVPLC*VSLQGLHLRRLRMD
Trigger: GTCCATTCTTAACCTTCTAAGATGTAAACCTTGAAGACTCACCAAGCAAAGAGGTACCCTAAAATTGAAGTCAGGATAAGGAGGACGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328823.13
ENST00000329620.9
ENST00000412113.5
ENST00000436265.5
ENST00000487176.1
ENST00000543212.5
CDS CAA 90 bp TCCTATGACCCATGTTTAAGATCCAATATTGCCTGGATTCCCTGTTaGGAAACTTTAGAGAGGTTTACAGCCACACTTTCCCTTTTCACT +
Preference number: 6 (lower is better)
Translates to: SYDPCLRSNIAWIPC*ETLERFTATLSLFT
Trigger: AGTGAAAAGGGAAAGTGTGGCTGTAAACCTCTCTAAAGTTTCCAAACAGGGAATCCAGGCAATATTGGATCTTAAACATGGGTCATAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470812.1
CDS TCA 72 bp CCAAATCCAAGCTCTCCCACATGCGCTTTAAGCAAATaGCTTCTTTTTGTTTTCCCACCTTCAAAGATAAAT +
Preference number: 6 (lower is better)
Translates to: PNPSSPTCALSK*LLFVFPPSKIN
Trigger: ATTTATCTTTGAAGGTGGGAAAACAAAAAGAAGTCATTTGCTTAAAGCGCATGTGGGAGAGCTTGGATTTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461730.1
CDS CCA 72 bp AGATCCTATGACCCATGTTTAAGATCCAATATTGCCTaGATTCCCTGTTTGGAAACTTTAGAGAGGTTTACA +
Preference number: 6 (lower is better)
Translates to: RSYDPCLRSNIA*IPCLETLERFT
Trigger: TGTAAACCTCTCTAAAGTTTCCAAACAGGGAATCCAGGCAATATTGGATCTTAAACATGGGTCATAGGATCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470812.1
CDS CAA 72 bp CCTTATCCTGACTTCAATTTTAGGGTACCTCTTTGCTaGGTGAGTCTTCAAGGTTTACATCTTAGAAGGTTA +
Preference number: 6 (lower is better)
Translates to: PYPDFNFRVPLC*VSLQGLHLRRL
Trigger: TAACCTTCTAAGATGTAAACCTTGAAGACTCACCAAGCAAAGAGGTACCCTAAAATTGAAGTCAGGATAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328823.13
ENST00000329620.9
ENST00000412113.5
ENST00000436265.5
ENST00000487176.1
ENST00000543212.5