RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for WBP1L (Homo sapiens)

Ensembl gene IDs: ENSG00000166272

Ensembl transcript IDs: ENST00000369884.4, ENST00000369889.5, ENST00000448841.7, ENST00000647664.1

Found 270 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGGCCACCATCCGAGAGGTGCTTCGCCTCAGGCCCGTGGCCCCTATaGTCATCCCCCACAAGGCCAACGTTGACTCCAGGTGTGCCTGCC +
Preference number: 1 (lower is better)
Translates to: RPPSERCFASGPWPL*SSPTRPTLTPGVPA
Trigger: GGCAGGCACACCTGGAGTCAACGTTGGCCTTGTGGGGGATGAGCATAGGGGCCACGGGCCTGAGGCGAAGCACCTCTCGGATGGTGGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647664.1
3UTR GCA 90 bp GTGACCGTAACCGTCTCCTCCTGCTGGAGGCCACCATCCGAGAGGTaGTTCGCCTCAGGCCCGTGGCCCCTATGCTCATCCCCCACAAGG +
Preference number: 1 (lower is better)
Translates to: VTVTVSSCWRPPSER*FASGPWPLCSSPTR
Trigger: CCTTGTGGGGGATGAGCATAGGGGCCACGGGCCTGAGGCGAAGCACCTCTCGGATGGTGGCCTCCAGCAGGAGGAGACGGTTACGGTCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647664.1
3UTR CCA 90 bp TCCTGCTGGAGGCCACCATCCGAGAGGTGCTTCGCCTCAGGCCCGTaGCCCCTATGCTCATCCCCCACAAGGCCAACGTTGACTCCAGGT +
Preference number: 1 (lower is better)
Translates to: SCWRPPSERCFASGP*PLCSSPTRPTLTPG
Trigger: ACCTGGAGTCAACGTTGGCCTTGTGGGGGATGAGCATAGGGGCCACGGGCCTGAGGCGAAGCACCTCTCGGATGGTGGCCTCCAGCAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647664.1
3UTR CCA 90 bp TCAGCCGCACACCAACTATCAGTGACCGTAACCGTCTCCTCCTGCTaGAGGCCACCATCCGAGAGGTGCTTCGCCTCAGGCCCGTGGCCC +
Preference number: 1 (lower is better)
Translates to: SAAHQLSVTVTVSSC*RPPSERCFASGPWP
Trigger: GGGCCACGGGCCTGAGGCGAAGCACCTCTCGGATGGTGGCCTCCAGCAGGAGGAGACGGTTACGGTCACTGATAGTTGGTGTGCGGCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647664.1
3UTR GCA 90 bp GTTTCAGCCGCACACCAACTATCAGTGACCGTAACCGTCTCCTCCTaGTGGAGGCCACCATCCGAGAGGTGCTTCGCCTCAGGCCCGTGG +
Preference number: 1 (lower is better)
Translates to: VSAAHQLSVTVTVSS*WRPPSERCFASGPW
Trigger: CCACGGGCCTGAGGCGAAGCACCTCTCGGATGGTGGCCTCCAGCAGGAGGAGACGGTTACGGTCACTGATAGTTGGTGTGCGGCTGAAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647664.1
3UTR CCA 90 bp AGGAGCTCTTCCTCATCATGGCCTGGCTGCTGCAGAGGTTCGACCTaGAGGTGCCAGATGATGGGCAGCTGCCCTCCCTGGAAGGCATCC +
Preference number: 1 (lower is better)
Translates to: RSSSSSWPGCCRGST*RCQMMGSCPPWKAS
Trigger: GGATGCCTTCCAGGGAGGGCAGCTGCCCATCATCTGGCACCTCCAGGTCGAACCTCTGCAGCAGCCAGGCCATGATGAGGAAGAGCTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647664.1
3UTR GCA 90 bp GGCTGGGAGCTCCATGTTCCAACCAGCTGCAGCACGCACATAACATaGGCTGCAGCTCCAAACGCACACCCACATACACTGCCAGACACC +
Preference number: 1 (lower is better)
Translates to: GWELHVPTSCSTHIT*AAAPNAHPHTLPDT
Trigger: GGTGTCTGGCAGTGTATGTGGGTGTGCGTTTGGAGCTGCAGCGCATGTTATGTGCGTGCTGCAGCTGGTTGGAACATGGAGCTCCCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647664.1
3UTR CCA 90 bp TTGGGGCTGGCGTGGAGACCACCACCTCTGTGGTTAAATGGACCCTaGCCTTCCTGCTGCACAATCCTCAGGTGTGCTTCCCCCTCATTG +
Preference number: 1 (lower is better)
Translates to: LGLAWRPPPLWLNGP*PSCCTILRCASPSL
Trigger: CAATGAGGGGGAAGCACACCTGAGGATTGTGCAGCAGGAAGGCCAGGGTCCATTTAACCACAGAGGTGGTGGTCTCCACGCCAGCCCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647664.1
3UTR CCA 90 bp GACATCTTTGGGGCTGGCGTGGAGACCACCACCTCTGTGGTTAAATaGACCCTGGCCTTCCTGCTGCACAATCCTCAGGTGTGCTTCCCC +
Preference number: 1 (lower is better)
Translates to: DIFGAGVETTTSVVK*TLAFLLHNPQVCFP
Trigger: GGGGAAGCACACCTGAGGATTGTGCAGCAGGAAGGCCAGGGTCCATTTAACCACAGAGGTGGTGGTCTCCACGCCAGCCCCAAAGATGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647664.1
3UTR TCA 90 bp AGTAAGCTATTTGCCCTTCGGAGCAGGACCTCGCTCCTGTATAGGTaGGATCCTGGCCCGCCAGGAGCTCTTCCTCATCATGGCCTGGCT +
Preference number: 1 (lower is better)
Translates to: SKLFALRSRTSLLYR*DPGPPGALPHHGLA
Trigger: AGCCAGGCCATGATGAGGAAGAGCTCCTGGCGGGCCAGGATCTCACCTATACAGGAGCGAGGTCCTGCTCCGAAGGGCAAATAGCTTACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647664.1
3UTR GCA 90 bp ATGTGGTCTGGGATGAAAGGCTGGGAGCTCCATGTTCCAACCAGCTaGAGCACGCACATAACATGCGCTGCAGCTCCAAACGCACACCCA +
Preference number: 1 (lower is better)
Translates to: MWSGMKGWELHVPTS*STHITCAAAPNAHP
Trigger: TGGGTGTGCGTTTGGAGCTGCAGCGCATGTTATGTGCGTGCTGCAGCTGGTTGGAACATGGAGCTCCCAGCCTTTCATCCCAGACCACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647664.1
3UTR GCA 90 bp GTGGTTAAATGGACCCTGGCCTTCCTGCTGCACAATCCTCAGGTGTaGTTCCCCCTCATTGATCCTAGACCCCAGCCAGCCCAATCTCTG +
Preference number: 1 (lower is better)
Translates to: VVKWTLAFLLHNPQV*FPLIDPRPQPAQSL
Trigger: CAGAGATTGGGCTGGCTGGGGTCTAGGATCAATGAGGGGGAAGCACACCTGAGGATTGTGCAGCAGGAAGGCCAGGGTCCATTTAACCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647664.1
3UTR GCA 90 bp TGGAGACCACCACCTCTGTGGTTAAATGGACCCTGGCCTTCCTGCTaGACAATCCTCAGGTGTGCTTCCCCCTCATTGATCCTAGACCCC +
Preference number: 1 (lower is better)
Translates to: WRPPPLWLNGPWPSC*TILRCASPSLILDP
Trigger: GGGGTCTAGGATCAATGAGGGGGAAGCACACCTGAGGATTGTGCAGCAGGAAGGCCAGGGTCCATTTAACCACAGAGGTGGTGGTCTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647664.1
3UTR GCA 90 bp GCGTGGAGACCACCACCTCTGTGGTTAAATGGACCCTGGCCTTCCTaGTGCACAATCCTCAGGTGTGCTTCCCCCTCATTGATCCTAGAC +
Preference number: 1 (lower is better)
Translates to: AWRPPPLWLNGPWPS*CTILRCASPSLILD
Trigger: GTCTAGGATCAATGAGGGGGAAGCACACCTGAGGATTGTGCAGCAGGAAGGCCAGGGTCCATTTAACCACAGAGGTGGTGGTCTCCACGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647664.1
3UTR GCA 90 bp AAGAGGGCCCGGGGCTGCCTCCTACCTCCACAAGTTCGTAGGTCCTaGCCAGACTTGCTCTACTTCCAAGTGGAAGGAGCCTTGTTATCT +
Preference number: 1 (lower is better)
Translates to: KRARGCLLPPQVRRS*PDLLYFQVEGALLS
Trigger: AGATAACAAGGCTCCTTCCACTTGGAAGTAGAGCAAGTCTGGGCAGGACCTACGAACTTGTGGAGGTAGGAGGCAGCCCCGGGCCCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647664.1
3UTR CCA 90 bp GAGCTTCCTGCTGCCCTCAGAGACATGTGGTCTGGGATGAAAGGCTaGGAGCTCCATGTTCCAACCAGCTGCAGCACGCACATAACATGC +
Preference number: 1 (lower is better)
Translates to: ELPAALRDMWSGMKG*ELHVPTSCSTHITC
Trigger: GCATGTTATGTGCGTGCTGCAGCTGGTTGGAACATGGAGCTCCCAGCCTTTCATCCCAGACCACATGTCTCTGAGGGCAGCAGGAAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647664.1
3UTR GCA 90 bp GGAGCTCCATGTTCCAACCAGCTGCAGCACGCACATAACATGCGCTaGAGCTCCAAACGCACACCCACATACACTGCCAGACACCAAAGT +
Preference number: 1 (lower is better)
Translates to: GAPCSNQLQHAHNMR*SSKRTPTYTARHQS
Trigger: ACTTTGGTGTCTGGCAGTGTATGTGGGTGTGCGTTTGGAGCTGCAGCGCATGTTATGTGCGTGCTGCAGCTGGTTGGAACATGGAGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647664.1
3UTR GCA 90 bp AGAAGAGACCTAACCTCTCCACCAAATTTAAAGAGGGCCCGGGGCTaGCTCCTACCTCCACAAGTTCGTAGGTCCTGCCCAGACTTGCTC +
Preference number: 1 (lower is better)
Translates to: RRDLTSPPNLKRARG*LLPPQVRRSCPDLL
Trigger: GAGCAAGTCTGGGCAGGACCTACGAACTTGTGGAGGTAGGAGGCAGCCCCGGGCCCTCTTTAAATTTGGTGGAGAGGTTAGGTCTCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647664.1
3UTR CCA 90 bp TCTGAGATCGTGCCACTGCACTGCATCCTAGAGCAAGACCCAATCTaGCTCCAGCACAGGTGTTCCGTCACAGTTTCTGTGGGATTGGGT +
Preference number: 1 (lower is better)
Translates to: SEIVPLHCILEQDPI*LQHRCSVTVSVGLG
Trigger: ACCCAATCCCACAGAAACTGTGACGGAACACCTGTGCTGGAGCCAGATTGGGTCTTGCTCTAGGATGCAGTGCAGTGGCACGATCTCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647664.1
3UTR CCA 90 bp AGGAAGGGAGTACGAAGTCCCAGACCCACTTTTCCTCTTCCACTCTaGAGCAGCATCGGTGAGTTTGCGTCAGTAAGCTATTTGCCCTTC +
Preference number: 1 (lower is better)
Translates to: RKGVRSPRPTFPLPL*SSIGEFASVSYLPF
Trigger: GAAGGGCAAATAGCTTACTGACGCAAACTCACCGATGCTGCTCCAGAGTGGAAGAGGAAAAGTGGGTCTGGGACTTCGTACTCCCTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647664.1
3UTR CCA 90 bp CAGACACAGGTGTTCAGACAGAAGCGCCTGTTAGGAGGGAAGGGATaGAGAAGGGCTGGATTTAGGTTTGATCTGGCAGAAGCTGAGGAA +
Preference number: 1 (lower is better)
Translates to: QTQVFRQKRLLGGKG*RRAGFRFDLAEAEE
Trigger: TTCCTCAGCTTCTGCCAGATCAAACCTAAATCCAGCCCTTCTCCATCCCTTCCCTCCTAACAGGCGCTTCTGTCTGAACACCTGTGTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647664.1
3UTR TCA 90 bp GGGCTTACACACACTAGTCACCTCCAACCTACTCTGGTCTTCAGGTaGAGAAGAAGCTCTACGAGGAGATTGACCAGAATGTGGGTTTCA +
Preference number: 1 (lower is better)
Translates to: GLTHTSHLQPTLVFR*RRSSTRRLTRMWVS
Trigger: TGAAACCCACATTCTGGTCAATCTCCTCGTAGAGCTTCTTCTTCACCTGAAGACCAGAGTAGGTTGGAGGTGACTAGTGTGTGTAAGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647664.1
3UTR-3UTR GCA 90 bp CTCCTCCTGCTGGAGGCCACCATCCGAGAGGTGCTTCGCCTCAGGCCCGTGGCCGCATTCAACACTGCTTaGCAGCCCACCTGGCTCCCC +
Preference number: 2 (lower is better)
Translates to: LLLLEATIREVLRLRPVAAFNTA*QPTWLP
Trigger: GGGGAGCCAGGTGGGCTGGCAAGCAGTGTTGAATGC...GGCCACGGGCCTGAGGCGAAGCACCTCTCGGATGGTGGCCTCCAGCAGGAGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647664.1
3UTR-3UTR CCA 90 bp CTCCTCCTGCTGGAGGCCACCATCCGAGAGGTGCTTCGCCTCAGGCCCGTGGCCGTCATCCCAACACTTTaGGAGGTCGAGGCGGGTGGA +
Preference number: 2 (lower is better)
Translates to: LLLLEATIREVLRLRPVAVIPTL*EVEAGG
Trigger: TCCACCCGCCTCGACCTCCCAAAGTGTTGGGATGAC...GGCCACGGGCCTGAGGCGAAGCACCTCTCGGATGGTGGCCTCCAGCAGGAGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647664.1
3UTR-3UTR GCA 90 bp AACCGTCTCCTCCTGCTGGAGGCCACCATCCGAGAGGTGCTTCGCCTCAGGCCCGGTTCGACCTGGAGGTaGCAGATGATGGGCAGCTGC +
Preference number: 2 (lower is better)
Translates to: NRLLLLEATIREVLRLRPGSTWR*QMMGSC
Trigger: GCAGCTGCCCATCATCTGGCACCTCCAGGTCGAACC...GGGCCTGAGGCGAAGCACCTCTCGGATGGTGGCCTCCAGCAGGAGGAGACGGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647664.1
3UTR-3UTR CCA 90 bp ATGCTCATCCCCCACAAGGCCAACGTTGACTCCAGGTGTGCCTGCCCTCCCAGTGGCAGCTGCCCTCCCTaGAAGGCATCCCCAAGGTGG +
Preference number: 2 (lower is better)
Translates to: MLIPHKANVDSRCACPPSGSCPP*KASPRW
Trigger: CCACCTTGGGGATGCCTTCCAGGGAGGGCAGCTGCC...ACTGGGAGGGCAGGCACACCTGGAGTCAACGTTGGCCTTGTGGGGGATGAGCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647664.1
3UTR-3UTR CCA 90 bp TTTGGGGCTGGCGTGGAGACCACCACCTCTGTGGTTAAATGGACCCTGGCCTTCAGCTGCCCCATCTTCTaGAAGCCGGGCCTGGGCCCC +
Preference number: 2 (lower is better)
Translates to: FGAGVETTTSVVKWTLAFSCPIF*KPGLGP
Trigger: GGGGCCCAGGCCCGGCTTCCAGAAGATGGGGCAGCT...GAAGGCCAGGGTCCATTTAACCACAGAGGTGGTGGTCTCCACGCCAGCCCCAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647664.1
3UTR-3UTR TCA 90 bp GCCCCTATGCTCATCCCCCACAAGGCCAACGTTGACTCCAGGTGTGCCTGCCCTGAGGCGGGTGGATCATaGGGTCAGGGGTTCAAGACC +
Preference number: 2 (lower is better)
Translates to: APMLIPHKANVDSRCACPEAGGS*GQGFKT
Trigger: GGTCTTGAACCCCTGACCTCATGATCCACCCGCCTC...AGGGCAGGCACACCTGGAGTCAACGTTGGCCTTGTGGGGGATGAGCATAGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000647664.1
3UTR-3UTR GCA 90 bp TTTGGGGCTGGCGTGGAGACCACCACCTCTGTGGTTAAATGGACCCTGGCCTTCCTGAGGTGGGAGGATTaGTGGACCCCAGGAGGCCGA +
Preference number: 2 (lower is better)
Translates to: FGAGVETTTSVVKWTLAFLRWED*WTPGGR
Trigger: TCGGCCTCCTGGGGTCCAGCAATCCTCCCACCTCAG...GAAGGCCAGGGTCCATTTAACCACAGAGGTGGTGGTCTCCACGCCAGCCCCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647664.1
3UTR-3UTR GCA 90 bp AACCGTCTCCTCCTGCTGGAGGCCACCATCCGAGAGGTGCTTCGCCTCAGGCCCAGCACGCACATAACATaGGCTGCAGCTCCAAACGCA +
Preference number: 2 (lower is better)
Translates to: NRLLLLEATIREVLRLRPSTHIT*AAAPNA
Trigger: TGCGTTTGGAGCTGCAGCGCATGTTATGTGCGTGCT...GGGCCTGAGGCGAAGCACCTCTCGGATGGTGGCCTCCAGCAGGAGGAGACGGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647664.1
3UTR-3UTR GCA 90 bp CACAATCCTCAGGTGTGCTTCCCCCTCATTGATCCTAGACCCCAGCCAGCCCAAGGCCCGTGGCCCCTATaGTCATCCCCCACAAGGCCA +
Preference number: 2 (lower is better)
Translates to: HNPQVCFPLIDPRPQPAQGPWPL*SSPTRP
Trigger: TGGCCTTGTGGGGGATGAGCATAGGGGCCACGGGCC...TTGGGCTGGCTGGGGTCTAGGATCAATGAGGGGGAAGCACACCTGAGGATTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000647664.1
3UTR-3UTR CCA 90 bp CACAATCCTCAGGTGTGCTTCCCCCTCATTGATCCTAGACCCCAGCCAGCCCAATTCGCCTCAGGCCCGTaGCCCCTATGCTCATCCCCC +
Preference number: 2 (lower is better)
Translates to: HNPQVCFPLIDPRPQPAQFASGP*PLCSSP
Trigger: GGGGGATGAGCATAGGGGCCACGGGCCTGAGGCGAA...TTGGGCTGGCTGGGGTCTAGGATCAATGAGGGGGAAGCACACCTGAGGATTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000647664.1
3UTR-3UTR GCA 90 bp AGTCCGCTGTCTGTTTCCTCATACGGAACAGTGAGACTTGAAGGCCCGCAGGGTACACCAGAACCAGCCTaGGGCCAGCCAGAGCCTGCG +
Preference number: 2 (lower is better)
Translates to: SPLSVSSYGTVRLEGPQGTPEPA*GQPEPA
Trigger: CGCAGGCTCTGGCTGGCCGCAGGCTGGTTCTGGTGT...ACCCTGCGGGCCTTCAAGTCTCACTGTTCCGTATGAGGAAACAGACAGCGGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369889.5
ENST00000448841.7
3UTR CAA 90 bp CCCCCAGCCCCGTGGCTCCATGTCTCTACCACCTACAGACACGCATaGACTCATCCACAGATCTGCCTGACTTCCCAGAGGAGCTTCCTG +
Preference number: 2 (lower is better)
Translates to: PPAPWLHVSTTYRHA*THPQICLTSQRSFL
Trigger: CAGGAAGCTCCTCTGGGAAGTCAGGCAGATCTGTGGATGAGTCAATGCGTGTCTGTAGGTGGTAGAGACATGGAGCCACGGGGCTGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647664.1
3UTR-3UTR TCA 90 bp CCTGCCCTCCCAGTGACATCTAGCCCCATGATGCATTCAACACTGCTTGCCAGCAGGCCGAGGCTGCAGTaGTCTGAGATCGTGCCACTG +
Preference number: 2 (lower is better)
Translates to: PALPVTSSPMMHSTLLASRPRLQ*SEIVPL
Trigger: CAGTGGCACGATCTCAGATCACTGCAGCCTCGGCCT...GCTGGCAAGCAGTGTTGAATGCATCATGGGGCTAGATGTCACTGGGAGGGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647664.1
3UTR-3UTR GCA 90 bp CACAATCCTCAGGTGTGCTTCCCCCTCATTGATCCTAGACCCCAGCCAGCCCAATCATGGCCTGGCTGCTaGAGAGGTTCGACCTGGAGG +
Preference number: 2 (lower is better)
Translates to: HNPQVCFPLIDPRPQPAQSWPGC*RGSTWR
Trigger: CCTCCAGGTCGAACCTCTGCAGCAGCCAGGCCATGA...TTGGGCTGGCTGGGGTCTAGGATCAATGAGGGGGAAGCACACCTGAGGATTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647664.1
3UTR-3UTR TCA 90 bp AGTCCGCTGTCTGTTTCCTCATACGGAACAGTGAGACTTGAAGGCCCGCAGGGTGCTTGCGATGCAGGCTaGCACGGGTCACCTGTGAAC +
Preference number: 2 (lower is better)
Translates to: SPLSVSSYGTVRLEGPQGACDAG*HGSPVN
Trigger: GTTCACAGGTGACCCGTGTCAGCCTGCATCGCAAGC...ACCCTGCGGGCCTTCAAGTCTCACTGTTCCGTATGAGGAAACAGACAGCGGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369889.5
ENST00000448841.7
3UTR-3UTR TCA 90 bp GCCCCTATGCTCATCCCCCACAAGGCCAACGTTGACTCCAGGTGTGCCTGCCCTTCGACTCTTTCAAAGTaGAGATCAAGGTGCGCCAGG +
Preference number: 2 (lower is better)
Translates to: APMLIPHKANVDSRCACPSTLSK*RSRCAR
Trigger: CCTGGCGCACCTTGATCTTCACTTTGAAAGAGTCGA...AGGGCAGGCACACCTGGAGTCAACGTTGGCCTTGTGGGGGATGAGCATAGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647664.1
3UTR-3UTR GCA 90 bp CACAATCCTCAGGTGTGCTTCCCCCTCATTGATCCTAGACCCCAGCCAGCCCAATCATCATGGCCTGGCTaGTGCAGAGGTTCGACCTGG +
Preference number: 2 (lower is better)
Translates to: HNPQVCFPLIDPRPQPAQSSWPG*CRGSTW
Trigger: CCAGGTCGAACCTCTGCAGCAGCCAGGCCATGATGA...TTGGGCTGGCTGGGGTCTAGGATCAATGAGGGGGAAGCACACCTGAGGATTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647664.1
3UTR-3UTR GCA 90 bp CACAATCCTCAGGTGTGCTTCCCCCTCATTGATCCTAGACCCCAGCCAGCCCAACAAGGCGGCGGAGGTTaGAGTGAGCCAAGATTGCAC +
Preference number: 2 (lower is better)
Translates to: HNPQVCFPLIDPRPQPAQQGGGG*SEPRLH
Trigger: GTGCAATCTTGGCTCACTGCAACCTCCGCCGCCTTG...TTGGGCTGGCTGGGGTCTAGGATCAATGAGGGGGAAGCACACCTGAGGATTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647664.1
3UTR-3UTR CCA 90 bp ACGTTGACTCCAGGTGTGCCTGCCCTCCCAGTGACATCTAGCCCCATGATGCATTGCAGAGGTTCGACCTaGAGGTGCCAGATGATGGGC +
Preference number: 2 (lower is better)
Translates to: TLTPGVPALPVTSSPMMHCRGST*RCQMMG
Trigger: GCCCATCATCTGGCACCTCCAGGTCGAACCTCTGCA...ATGCATCATGGGGCTAGATGTCACTGGGAGGGCAGGCACACCTGGAGTCAACGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647664.1
3UTR-3UTR CCA 90 bp TTTGGGGCTGGCGTGGAGACCACCACCTCTGTGGTTAAATGGACCCTGGCCTTCTTCCTCATCATGGCCTaGCTGCTGCAGAGGTTCGAC +
Preference number: 2 (lower is better)
Translates to: FGAGVETTTSVVKWTLAFFLIMA*LLQRFD
Trigger: GTCGAACCTCTGCAGCAGCCAGGCCATGATGAGGAA...GAAGGCCAGGGTCCATTTAACCACAGAGGTGGTGGTCTCCACGCCAGCCCCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647664.1
3UTR-3UTR CCA 90 bp GCCCCTATGCTCATCCCCCACAAGGCCAACGTTGACTCCAGGTGTGCCTGCCCTTTAGGAGGGAAGGGATaGAGAAGGGCTGGATTTAGG +
Preference number: 2 (lower is better)
Translates to: APMLIPHKANVDSRCACPLGGKG*RRAGFR
Trigger: CCTAAATCCAGCCCTTCTCCATCCCTTCCCTCCTAA...AGGGCAGGCACACCTGGAGTCAACGTTGGCCTTGTGGGGGATGAGCATAGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647664.1
3UTR-3UTR CCA 90 bp ATGCTCATCCCCCACAAGGCCAACGTTGACTCCAGGTGTGCCTGCCCTCCCAGTCAGAGACATGTGGTCTaGGATGAAAGGCTGGGAGCT +
Preference number: 2 (lower is better)
Translates to: MLIPHKANVDSRCACPPSQRHVV*DERLGA
Trigger: AGCTCCCAGCCTTTCATCCCAGACCACATGTCTCTG...ACTGGGAGGGCAGGCACACCTGGAGTCAACGTTGGCCTTGTGGGGGATGAGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647664.1
3UTR-3UTR TCA 90 bp AGTCCGCTGTCTGTTTCCTCATACGGAACAGTGAGACTTGAAGGCCCGCAGGGTGACACGGGTCACCTGTaGACACAGACCAAAGGGCAG +
Preference number: 2 (lower is better)
Translates to: SPLSVSSYGTVRLEGPQGDTGHL*TQTKGQ
Trigger: CTGCCCTTTGGTCTGTGTTCACAGGTGACCCGTGTC...ACCCTGCGGGCCTTCAAGTCTCACTGTTCCGTATGAGGAAACAGACAGCGGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369889.5
ENST00000448841.7
3UTR-3UTR TCA 90 bp ACGTTGACTCCAGGTGTGCCTGCCCTCCCAGTGACATCTAGCCCCATGATGCATATCCACAGATCTGCCTaGCTTCCCAGAGGAGCTTCC +
Preference number: 2 (lower is better)
Translates to: TLTPGVPALPVTSSPMMHIHRSA*LPRGAS
Trigger: GGAAGCTCCTCTGGGAAGTCAGGCAGATCTGTGGAT...ATGCATCATGGGGCTAGATGTCACTGGGAGGGCAGGCACACCTGGAGTCAACGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647664.1
3UTR-3UTR GCA 90 bp AGTCCGCTGTCTGTTTCCTCATACGGAACAGTGAGACTTGAAGGCCCGCAGGGTCCCTCCACAACACTGTaGCCTTGTGGAGGAAGAGGC +
Preference number: 2 (lower is better)
Translates to: SPLSVSSYGTVRLEGPQGPSTTL*PCGGRG
Trigger: GCCTCTTCCTCCACAAGGGCACAGTGTTGTGGAGGG...ACCCTGCGGGCCTTCAAGTCTCACTGTTCCGTATGAGGAAACAGACAGCGGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369889.5
ENST00000448841.7
3UTR-3UTR GCA 90 bp AAGTCCACAGACACAGGTGTTCAGACAGAAGCGCCTGTTAGGAGGGAAGGGATGCAGATGATGGGCAGCTaGCCTCCCTGGAAGGCATCC +
Preference number: 2 (lower is better)
Translates to: KSTDTGVQTEAPVRREGMQMMGS*PPWKAS
Trigger: GGATGCCTTCCAGGGAGGGCAGCTGCCCATCATCTG...CATCCCTTCCCTCCTAACAGGCGCTTCTGTCTGAACACCTGTGTCTGTGGACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647664.1
3UTR-3UTR CCA 90 bp AGTCCGCTGTCTGTTTCCTCATACGGAACAGTGAGACTTGAAGGCCCGCAGGGTTGGCTTGGCAGACACTaGCAGCCCAATGACAAGCCC +
Preference number: 2 (lower is better)
Translates to: SPLSVSSYGTVRLEGPQGWLGRH*QPNDKP
Trigger: GGGCTTGTCATTGGGCTGCCAGTGTCTGCCAAGCCA...ACCCTGCGGGCCTTCAAGTCTCACTGTTCCGTATGAGGAAACAGACAGCGGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369889.5
ENST00000448841.7
3UTR-3UTR TCA 90 bp ACAGATGGGGCTCCTTCCTTATTAATGTCTCCCAACCTCACCCAACCCAGGAGACGGCGGAGGTTGCAGTaGGCCAAGATTGCACCACTG +
Preference number: 2 (lower is better)
Translates to: TDGAPSLLMSPNLTQPRRRRRLQ*AKIAPL
Trigger: CAGTGGTGCAATCTTGGCTCACTGCAACCTCCGCCG...TCTCCTGGGTTGGGTGAGGTTGGGAGACATTAATAAGGAAGGAGCCCCATCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647664.1
3UTR-3UTR GCA 90 bp AGTCCGCTGTCTGTTTCCTCATACGGAACAGTGAGACTTGAAGGCCCGCAGGGTAGGGCCAAGATGGGCTaGCTCTCCTGGACTGAGATA +
Preference number: 2 (lower is better)
Translates to: SPLSVSSYGTVRLEGPQGRAKMG*LSWTEI
Trigger: TATCTCAGTCCAGGAGAGGCAGCCCATCTTGGCCCT...ACCCTGCGGGCCTTCAAGTCTCACTGTTCCGTATGAGGAAACAGACAGCGGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369889.5
ENST00000448841.7
3UTR-3UTR GCA 90 bp ACAGATGGGGCTCCTTCCTTATTAATGTCTCCCAACCTCACCCAACCCAGGAGACCAGGAGGCCGAGGCTaGAGTGATCTGAGATCGTGC +
Preference number: 2 (lower is better)
Translates to: TDGAPSLLMSPNLTQPRRPGGRG*SDLRSC
Trigger: GCACGATCTCAGATCACTGCAGCCTCGGCCTCCTGG...TCTCCTGGGTTGGGTGAGGTTGGGAGACATTAATAAGGAAGGAGCCCCATCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647664.1
3UTR-3UTR CCA 90 bp CACAATCCTCAGGTGTGCTTCCCCCTCATTGATCCTAGACCCCAGCCAGCCCAATCTGGGATGAAAGGCTaGGAGCTCCATGTTCCAACC +
Preference number: 2 (lower is better)
Translates to: HNPQVCFPLIDPRPQPAQSGMKG*ELHVPT
Trigger: GGTTGGAACATGGAGCTCCCAGCCTTTCATCCCAGA...TTGGGCTGGCTGGGGTCTAGGATCAATGAGGGGGAAGCACACCTGAGGATTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647664.1
3UTR-3UTR TCA 90 bp AGTCCGCTGTCTGTTTCCTCATACGGAACAGTGAGACTTGAAGGCCCGCAGGGTCTGCCTCTCCTGGACTaGGATACAGCAACGTTCTCT +
Preference number: 2 (lower is better)
Translates to: SPLSVSSYGTVRLEGPQGLPLLD*DTATFS
Trigger: AGAGAACGTTGCTGTATCTCAGTCCAGGAGAGGCAG...ACCCTGCGGGCCTTCAAGTCTCACTGTTCCGTATGAGGAAACAGACAGCGGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369889.5
ENST00000448841.7
3UTR-3UTR GCA 90 bp AGTCCGCTGTCTGTTTCCTCATACGGAACAGTGAGACTTGAAGGCCCGCAGGGTCAAGGACGCATGGGGTaGATAGATCTTGTCACCTGG +
Preference number: 2 (lower is better)
Translates to: SPLSVSSYGTVRLEGPQGQGRMG*IDLVTW
Trigger: CCAGGTGACAAGATCTATGCACCCCATGCGTCCTTG...ACCCTGCGGGCCTTCAAGTCTCACTGTTCCGTATGAGGAAACAGACAGCGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369889.5
ENST00000448841.7
3UTR-3UTR CCA 90 bp AGTCCGCTGTCTGTTTCCTCATACGGAACAGTGAGACTTGAAGGCCCGCAGGGTACACGAGACATCTTCTaGCTCAACAGCAGGCAGGCT +
Preference number: 2 (lower is better)
Translates to: SPLSVSSYGTVRLEGPQGTRDIF*LNSRQA
Trigger: AGCCTGCCTGCTGTTGAGCCAGAAGATGTCTCGTGT...ACCCTGCGGGCCTTCAAGTCTCACTGTTCCGTATGAGGAAACAGACAGCGGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369889.5
ENST00000448841.7
3UTR-3UTR CCA 90 bp AAGTCCACAGACACAGGTGTTCAGACAGAAGCGCCTGTTAGGAGGGAAGGGATGGAGCAAGACCCAATCTaGCTCCAGCACAGGTGTTCC +
Preference number: 2 (lower is better)
Translates to: KSTDTGVQTEAPVRREGMEQDPI*LQHRCS
Trigger: GGAACACCTGTGCTGGAGCCAGATTGGGTCTTGCTC...CATCCCTTCCCTCCTAACAGGCGCTTCTGTCTGAACACCTGTGTCTGTGGACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647664.1
3UTR CAA 90 bp GCCACTACTGGGAAGGGACTGGACAGGCTCTTCTCGATGTCACAGTaGGATTCTTCTCTAAGCCCTTGCTTCTCCTGGGCTTACACACAC +
Preference number: 2 (lower is better)
Translates to: ATTGKGLDRLFSMSQ*DSSLSPCFSWAYTH
Trigger: GTGTGTGTAAGCCCAGGAGAAGCAAGGGCTTAGAGAAGAATCCAACTGTGACATCGAGAAGAGCCTGTCCAGTCCCTTCCCAGTAGTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647664.1
3UTR-3UTR TCA 90 bp AAGTATGGCAGGAGTGTCACAGATGGGGCTCCTTCCTTATTAATGTCTCCCAACTCGCTCCTGTATAGGTaGGATCCTGGCCCGCCAGGA +
Preference number: 2 (lower is better)
Translates to: KYGRSVTDGAPSLLMSPNSLLYR*DPGPPG
Trigger: TCCTGGCGGGCCAGGATCTCACCTATACAGGAGCGA...GTTGGGAGACATTAATAAGGAAGGAGCCCCATCTGTGACACTCCTGCCATACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647664.1
3UTR-3UTR TCA 90 bp CACAATCCTCAGGTGTGCTTCCCCCTCATTGATCCTAGACCCCAGCCAGCCCAAAAGCTGAGGAAAACATaGGTGAGTGGGAATGAGGGA +
Preference number: 2 (lower is better)
Translates to: HNPQVCFPLIDPRPQPAQKLRKT*VSGNEG
Trigger: TCCCTCATTCCCACTCACTCATGTTTTCCTCAGCTT...TTGGGCTGGCTGGGGTCTAGGATCAATGAGGGGGAAGCACACCTGAGGATTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000647664.1
3UTR-3UTR TCA 90 bp TGGCTCCATGTCTCTACCACCTACAGACACGCATTGACTCATCCACAGATCTGCACATGTGGTCTGGGATaGAAGGCTGGGAGCTCCATG +
Preference number: 2 (lower is better)
Translates to: WLHVSTTYRHALTHPQICTCGLG*KAGSSM
Trigger: CATGGAGCTCCCAGCCTTTCATCCCAGACCACATGT...GCAGATCTGTGGATGAGTCAATGCGTGTCTGTAGGTGGTAGAGACATGGAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647664.1
3UTR-3UTR GCA 90 bp ACAGATGGGGCTCCTTCCTTATTAATGTCTCCCAACCTCACCCAACCCAGGAGAGCACATAACATGCGCTaGAGCTCCAAACGCACACCC +
Preference number: 2 (lower is better)
Translates to: TDGAPSLLMSPNLTQPRRAHNMR*SSKRTP
Trigger: GGGTGTGCGTTTGGAGCTGCAGCGCATGTTATGTGC...TCTCCTGGGTTGGGTGAGGTTGGGAGACATTAATAAGGAAGGAGCCCCATCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647664.1
3UTR-3UTR CCA 90 bp TACAGACACGCATTGACTCATCCACAGATCTGCCTGACTTCCCAGAGGAGCTTCAGCTCTTCCTCATCATaGCCTGGCTGCTGCAGAGGT +
Preference number: 2 (lower is better)
Translates to: YRHALTHPQICLTSQRSFSSSSS*PGCCRG
Trigger: ACCTCTGCAGCAGCCAGGCCATGATGAGGAAGAGCT...GAAGCTCCTCTGGGAAGTCAGGCAGATCTGTGGATGAGTCAATGCGTGTCTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647664.1
3UTR CAA 90 bp CGTAGGTCCTGCCCAGACTTGCTCTACTTCCAAGTGGAAGGAGCCTaGTTATCTCTAGTCAGGGACAGAAGTATGGCAGGAGTGTCACAG +
Preference number: 2 (lower is better)
Translates to: RRSCPDLLYFQVEGA*LSLVRDRSMAGVSQ
Trigger: CTGTGACACTCCTGCCATACTTCTGTCCCTGACTAGAGATAACAAGGCTCCTTCCACTTGGAAGTAGAGCAAGTCTGGGCAGGACCTACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647664.1
3UTR-3UTR TCA 90 bp AGTCCGCTGTCTGTTTCCTCATACGGAACAGTGAGACTTGAAGGCCCGCAGGGTGATGGAGTTAGGGTATaGGGAATGAGTCACAGAACC +
Preference number: 2 (lower is better)
Translates to: SPLSVSSYGTVRLEGPQGDGVRV*GMSHRT
Trigger: GGTTCTGTGACTCATTCCTCATACCCTAACTCCATC...ACCCTGCGGGCCTTCAAGTCTCACTGTTCCGTATGAGGAAACAGACAGCGGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369889.5
ENST00000448841.7
3UTR-3UTR TCA 90 bp ACAGATGGGGCTCCTTCCTTATTAATGTCTCCCAACCTCACCCAACCCAGGAGACTGGAGCAGCATCGGTaGGTTTGCGTCAGTAAGCTA +
Preference number: 2 (lower is better)
Translates to: TDGAPSLLMSPNLTQPRRLEQHR*VCVSKL
Trigger: TAGCTTACTGACGCAAACTCACCGATGCTGCTCCAG...TCTCCTGGGTTGGGTGAGGTTGGGAGACATTAATAAGGAAGGAGCCCCATCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647664.1
3UTR CAA 90 bp GGACAGGCTCTTCTCGATGTCACAGTTGGATTCTTCTCTAAGCCCTaGCTTCTCCTGGGCTTACACACACTAGTCACCTCCAACCTACTC +
Preference number: 2 (lower is better)
Translates to: GQALLDVTVGFFSKP*LLLGLHTLVTSNLL
Trigger: GAGTAGGTTGGAGGTGACTAGTGTGTGTAAGCCCAGGAGAAGCAAGGGCTTAGAGAAGAATCCAACTGTGACATCGAGAAGAGCCTGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647664.1
3UTR-3UTR GCA 90 bp AAGTATGGCAGGAGTGTCACAGATGGGGCTCCTTCCTTATTAATGTCTCCCAACAGTTCAAGACCAGCCTaGCCAACGTGGCGAAACCTC +
Preference number: 2 (lower is better)
Translates to: KYGRSVTDGAPSLLMSPNSSRPA*PTWRNL
Trigger: GAGGTTTCGCCACGTTGGGCAGGCTGGTCTTGAACT...GTTGGGAGACATTAATAAGGAAGGAGCCCCATCTGTGACACTCCTGCCATACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647664.1
3UTR-3UTR TCA 90 bp AGTCCGCTGTCTGTTTCCTCATACGGAACAGTGAGACTTGAAGGCCCGCAGGGTCAAGTGGCTGTACTCTaGAAGTCTTTGAAAGTCACT +
Preference number: 2 (lower is better)
Translates to: SPLSVSSYGTVRLEGPQGQVAVL*KSLKVT
Trigger: AGTGACTTTCAAAGACTTTCAGAGTACAGCCACTTG...ACCCTGCGGGCCTTCAAGTCTCACTGTTCCGTATGAGGAAACAGACAGCGGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369889.5
ENST00000448841.7
3UTR-3UTR TCA 90 bp AAGTATGGCAGGAGTGTCACAGATGGGGCTCCTTCCTTATTAATGTCTCCCAACCCTACAGACACGCATTaGCTCATCCACAGATCTGCC +
Preference number: 2 (lower is better)
Translates to: KYGRSVTDGAPSLLMSPNPTDTH*LIHRSA
Trigger: GGCAGATCTGTGGATGAGTCAATGCGTGTCTGTAGG...GTTGGGAGACATTAATAAGGAAGGAGCCCCATCTGTGACACTCCTGCCATACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647664.1
3UTR-3UTR CCA 90 bp ACAGATGGGGCTCCTTCCTTATTAATGTCTCCCAACCTCACCCAACCCAGGAGATTTCCTCTTCCACTCTaGAGCAGCATCGGTGAGTTT +
Preference number: 2 (lower is better)
Translates to: TDGAPSLLMSPNLTQPRRFPLPL*SSIGEF
Trigger: AAACTCACCGATGCTGCTCCAGAGTGGAAGAGGAAA...TCTCCTGGGTTGGGTGAGGTTGGGAGACATTAATAAGGAAGGAGCCCCATCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647664.1
3UTR-3UTR TCA 90 bp AAGTATGGCAGGAGTGTCACAGATGGGGCTCCTTCCTTATTAATGTCTCCCAACACTCTGGTCTTCAGGTaGAGAAGAAGCTCTACGAGG +
Preference number: 2 (lower is better)
Translates to: KYGRSVTDGAPSLLMSPNTLVFR*RRSSTR
Trigger: CCTCGTAGAGCTTCTTCTTCACCTGAAGACCAGAGT...GTTGGGAGACATTAATAAGGAAGGAGCCCCATCTGTGACACTCCTGCCATACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647664.1
3UTR-3UTR GCA 90 bp TTAATGTCTCCCAACCTCACCCAACCCAGGAGAAATTCCGGAGTGACTCTATCACATGTTCCAACCAGCTaGAGCACGCACATAACATGC +
Preference number: 2 (lower is better)
Translates to: LMSPNLTQPRRNSGVTLSHVPTS*STHITC
Trigger: GCATGTTATGTGCGTGCTGCAGCTGGTTGGAACATG...TGATAGAGTCACTCCGGAATTTCTCCTGGGTTGGGTGAGGTTGGGAGACATTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647664.1
3UTR-3UTR CCA 90 bp AGTCCGCTGTCTGTTTCCTCATACGGAACAGTGAGACTTGAAGGCCCGCAGGGTCAAAAAGGAACCAAGTaGCTGTACTCTGAAAGTCTT +
Preference number: 2 (lower is better)
Translates to: SPLSVSSYGTVRLEGPQGQKGTK*LYSESL
Trigger: AAGACTTTCAGAGTACAGCCACTTGGTTCCTTTTTG...ACCCTGCGGGCCTTCAAGTCTCACTGTTCCGTATGAGGAAACAGACAGCGGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369889.5
ENST00000448841.7
3UTR-3UTR CCA 90 bp ACAGATGGGGCTCCTTCCTTATTAATGTCTCCCAACCTCACCCAACCCAGGAGAGATTTAGGTTTGATCTaGCAGAAGCTGAGGAAAACA +
Preference number: 2 (lower is better)
Translates to: TDGAPSLLMSPNLTQPRRDLGLI*QKLRKT
Trigger: TGTTTTCCTCAGCTTCTGCCAGATCAAACCTAAATC...TCTCCTGGGTTGGGTGAGGTTGGGAGACATTAATAAGGAAGGAGCCCCATCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647664.1
3UTR GCA 72 bp ACCGTCTCCTCCTGCTGGAGGCCACCATCCGAGAGGTaGTTCGCCTCAGGCCCGTGGCCCCTATGCTCATCC +
Preference number: 3 (lower is better)
Translates to: TVSSCWRPPSER*FASGPWPLCSS
Trigger: GGATGAGCATAGGGGCCACGGGCCTGAGGCGAAGCACCTCTCGGATGGTGGCCTCCAGCAGGAGGAGACGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647664.1
3UTR CCA 72 bp AGGCCACCATCCGAGAGGTGCTTCGCCTCAGGCCCGTaGCCCCTATGCTCATCCCCCACAAGGCCAACGTTG +
Preference number: 3 (lower is better)
Translates to: RPPSERCFASGP*PLCSSPTRPTL
Trigger: CAACGTTGGCCTTGTGGGGGATGAGCATAGGGGCCACGGGCCTGAGGCGAAGCACCTCTCGGATGGTGGCCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647664.1
3UTR TCA 72 bp CTGGCTGCTGCAGAGGTTCGACCTGGAGGTGCCAGATaGTGGGCAGCTGCCCTCCCTGGAAGGCATCCCCAA +
Preference number: 3 (lower is better)
Translates to: LAAAEVRPGGAR*WAAALPGRHPQ
Trigger: TTGGGGATGCCTTCCAGGGAGGGCAGCTGCCCATCATCTGGCACCTCCAGGTCGAACCTCTGCAGCAGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647664.1
3UTR GCA 72 bp CCCGCCAGGAGCTCTTCCTCATCATGGCCTGGCTGCTaGAGAGGTTCGACCTGGAGGTGCCAGATGATGGGC +
Preference number: 3 (lower is better)
Translates to: PARSSSSSWPGC*RGSTWRCQMMG
Trigger: GCCCATCATCTGGCACCTCCAGGTCGAACCTCTGCAGCAGCCAGGCCATGATGAGGAAGAGCTCCTGGCGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647664.1
3UTR GCA 72 bp TCCGAGAGGTGCTTCGCCTCAGGCCCGTGGCCCCTATaGTCATCCCCCACAAGGCCAACGTTGACTCCAGGT +
Preference number: 3 (lower is better)
Translates to: SERCFASGPWPL*SSPTRPTLTPG
Trigger: ACCTGGAGTCAACGTTGGCCTTGTGGGGGATGAGCATAGGGGCCACGGGCCTGAGGCGAAGCACCTCTCGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647664.1
3UTR GCA 72 bp TGGCCCGCCAGGAGCTCTTCCTCATCATGGCCTGGCTaGTGCAGAGGTTCGACCTGGAGGTGCCAGATGATG +
Preference number: 3 (lower is better)
Translates to: WPARSSSSSWPG*CRGSTWRCQMM
Trigger: CATCATCTGGCACCTCCAGGTCGAACCTCTGCAGCAGCCAGGCCATGATGAGGAAGAGCTCCTGGCGGGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647664.1
3UTR-3UTR CAA 90 bp GCCCCTATGCTCATCCCCCACAAGGCCAACGTTGACTCCAGGTGTGCCTGCCCTAGGCAGGAGAATCACTaGAACCAAGGCGGCGGAGGT +
Preference number: 3 (lower is better)
Translates to: APMLIPHKANVDSRCACPRQENH*NQGGGG
Trigger: ACCTCCGCCGCCTTGGTTCAAGTGATTCTCCTGCCT...AGGGCAGGCACACCTGGAGTCAACGTTGGCCTTGTGGGGGATGAGCATAGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647664.1
3UTR GCA 72 bp TGGACCCTGGCCTTCCTGCTGCACAATCCTCAGGTGTaGTTCCCCCTCATTGATCCTAGACCCCAGCCAGCC +
Preference number: 3 (lower is better)
Translates to: WTLAFLLHNPQV*FPLIDPRPQPA
Trigger: GGCTGGCTGGGGTCTAGGATCAATGAGGGGGAAGCACACCTGAGGATTGTGCAGCAGGAAGGCCAGGGTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647664.1
3UTR CCA 72 bp CACCAACTATCAGTGACCGTAACCGTCTCCTCCTGCTaGAGGCCACCATCCGAGAGGTGCTTCGCCTCAGGC +
Preference number: 3 (lower is better)
Translates to: HQLSVTVTVSSC*RPPSERCFASG
Trigger: GCCTGAGGCGAAGCACCTCTCGGATGGTGGCCTCCAGCAGGAGGAGACGGTTACGGTCACTGATAGTTGGTG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647664.1
3UTR CCA 72 bp GGGGCTGGCGTGGAGACCACCACCTCTGTGGTTAAATaGACCCTGGCCTTCCTGCTGCACAATCCTCAGGTG +
Preference number: 3 (lower is better)
Translates to: GAGVETTTSVVK*TLAFLLHNPQV
Trigger: CACCTGAGGATTGTGCAGCAGGAAGGCCAGGGTCCATTTAACCACAGAGGTGGTGGTCTCCACGCCAGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647664.1
3UTR GCA 72 bp GCACACCAACTATCAGTGACCGTAACCGTCTCCTCCTaGTGGAGGCCACCATCCGAGAGGTGCTTCGCCTCA +
Preference number: 3 (lower is better)
Translates to: AHQLSVTVTVSS*WRPPSERCFAS
Trigger: TGAGGCGAAGCACCTCTCGGATGGTGGCCTCCAGCAGGAGGAGACGGTTACGGTCACTGATAGTTGGTGTGC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647664.1
3UTR GCA 72 bp CGGGGCTGCCTCCTACCTCCACAAGTTCGTAGGTCCTaGCCAGACTTGCTCTACTTCCAAGTGGAAGGAGCC +
Preference number: 3 (lower is better)
Translates to: RGCLLPPQVRRS*PDLLYFQVEGA
Trigger: GGCTCCTTCCACTTGGAAGTAGAGCAAGTCTGGGCAGGACCTACGAACTTGTGGAGGTAGGAGGCAGCCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647664.1
3UTR TCA 72 bp GCCTGCCCTGCTCCTTACCCAAGCAGTAGTTGGCTTTaGCCCCAGAGTAGAGCTGCCCCATCTTCTGGAAGC +
Preference number: 3 (lower is better)
Translates to: ACPAPYPSSSWL*PQSRAAPSSGS
Trigger: GCTTCCAGAAGATGGGGCAGCTCTACTCTGGGGTCAAAGCCAACTACTGCTTGGGTAAGGAGCAGGGCAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647664.1
3UTR CCA 72 bp GCGTGGAGACCACCACCTCTGTGGTTAAATGGACCCTaGCCTTCCTGCTGCACAATCCTCAGGTGTGCTTCC +
Preference number: 3 (lower is better)
Translates to: AWRPPPLWLNGP*PSCCTILRCAS
Trigger: GGAAGCACACCTGAGGATTGTGCAGCAGGAAGGCCAGGGTCCATTTAACCACAGAGGTGGTGGTCTCCACGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647664.1
3UTR GCA 72 bp GGGATGAAAGGCTGGGAGCTCCATGTTCCAACCAGCTaGAGCACGCACATAACATGCGCTGCAGCTCCAAAC +
Preference number: 3 (lower is better)
Translates to: GMKGWELHVPTS*STHITCAAAPN
Trigger: GTTTGGAGCTGCAGCGCATGTTATGTGCGTGCTGCAGCTGGTTGGAACATGGAGCTCCCAGCCTTTCATCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647664.1
3UTR GCA 72 bp CCACCACCTCTGTGGTTAAATGGACCCTGGCCTTCCTaGTGCACAATCCTCAGGTGTGCTTCCCCCTCATTG +
Preference number: 3 (lower is better)
Translates to: PPPLWLNGPWPS*CTILRCASPSL
Trigger: CAATGAGGGGGAAGCACACCTGAGGATTGTGCAGCAGGAAGGCCAGGGTCCATTTAACCACAGAGGTGGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647664.1
3UTR GCA 72 bp CTAACCTCTCCACCAAATTTAAAGAGGGCCCGGGGCTaGCTCCTACCTCCACAAGTTCGTAGGTCCTGCCCA +
Preference number: 3 (lower is better)
Translates to: LTSPPNLKRARG*LLPPQVRRSCP
Trigger: TGGGCAGGACCTACGAACTTGTGGAGGTAGGAGGCAGCCCCGGGCCCTCTTTAAATTTGGTGGAGAGGTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647664.1
3UTR CCA 72 bp ACATCTTTGGGGCTGGCGTGGAGACCACCACCTCTGTaGTTAAATGGACCCTGGCCTTCCTGCTGCACAATC +
Preference number: 3 (lower is better)
Translates to: TSLGLAWRPPPL*LNGPWPSCCTI
Trigger: GATTGTGCAGCAGGAAGGCCAGGGTCCATTTAACCACAGAGGTGGTGGTCTCCACGCCAGCCCCAAAGATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647664.1
3UTR-3UTR CAA 90 bp AGTCCGCTGTCTGTTTCCTCATACGGAACAGTGAGACTTGAAGGCCCGCAGGGTCACAACACTGTGCCCTaGTGGAGGAAGAGGCATCCA +
Preference number: 3 (lower is better)
Translates to: SPLSVSSYGTVRLEGPQGHNTVP*WRKRHP
Trigger: TGGATGCCTCTTCCTCCACAAGGGCACAGTGTTGTG...ACCCTGCGGGCCTTCAAGTCTCACTGTTCCGTATGAGGAAACAGACAGCGGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369889.5
ENST00000448841.7
3UTR TCA 72 bp TCCTCAGTCCGCTGTCTGTTTCCTCATACGGAACAGTaGGACTTGAAGGCCCGCAGGGTGTGTGCTTGCGAT +
Preference number: 3 (lower is better)
Translates to: SSVRCLFPHTEQ*DLKARRVCACD
Trigger: ATCGCAAGCACACACCCTGCGGGCCTTCAAGTCTCACTGTTCCGTATGAGGAAACAGACAGCGGACTGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369889.5
ENST00000448841.7
3UTR GCA 72 bp TGTTCCAACCAGCTGCAGCACGCACATAACATGCGCTaGAGCTCCAAACGCACACCCACATACACTGCCAGA +
Preference number: 3 (lower is better)
Translates to: CSNQLQHAHNMR*SSKRTPTYTAR
Trigger: TCTGGCAGTGTATGTGGGTGTGCGTTTGGAGCTGCAGCGCATGTTATGTGCGTGCTGCAGCTGGTTGGAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647664.1
3UTR GCA 72 bp CTCCATGTTCCAACCAGCTGCAGCACGCACATAACATaGGCTGCAGCTCCAAACGCACACCCACATACACTG +
Preference number: 3 (lower is better)
Translates to: LHVPTSCSTHIT*AAAPNAHPHTL
Trigger: CAGTGTATGTGGGTGTGCGTTTGGAGCTGCAGCGCATGTTATGTGCGTGCTGCAGCTGGTTGGAACATGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647664.1
3UTR GCA 72 bp CCACCTCTGTGGTTAAATGGACCCTGGCCTTCCTGCTaGACAATCCTCAGGTGTGCTTCCCCCTCATTGATC +
Preference number: 3 (lower is better)
Translates to: PPLWLNGPWPSC*TILRCASPSLI
Trigger: GATCAATGAGGGGGAAGCACACCTGAGGATTGTGCAGCAGGAAGGCCAGGGTCCATTTAACCACAGAGGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647664.1
3UTR CCA 72 bp GTGCCACTGCACTGCATCCTAGAGCAAGACCCAATCTaGCTCCAGCACAGGTGTTCCGTCACAGTTTCTGTG +
Preference number: 3 (lower is better)
Translates to: VPLHCILEQDPI*LQHRCSVTVSV
Trigger: CACAGAAACTGTGACGGAACACCTGTGCTGGAGCCAGATTGGGTCTTGCTCTAGGATGCAGTGCAGTGGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647664.1
3UTR-3UTR CAA 90 bp TACAGACACGCATTGACTCATCCACAGATCTGCCTGACTTCCCAGAGGAGCTTCGCGTCAGTAAGCTATTaGCCCTTCGGAGCAGGACCT +
Preference number: 3 (lower is better)
Translates to: YRHALTHPQICLTSQRSFASVSY*PFGAGP
Trigger: AGGTCCTGCTCCGAAGGGCAAATAGCTTACTGACGC...GAAGCTCCTCTGGGAAGTCAGGCAGATCTGTGGATGAGTCAATGCGTGTCTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647664.1
3UTR GCA 72 bp TCCTACCTCCACAAGTTCGTAGGTCCTGCCCAGACTTaGTCTACTTCCAAGTGGAAGGAGCCTTGTTATCTC +
Preference number: 3 (lower is better)
Translates to: SYLHKFVGPAQT*STSKWKEPCYL
Trigger: GAGATAACAAGGCTCCTTCCACTTGGAAGTAGAGCAAGTCTGGGCAGGACCTACGAACTTGTGGAGGTAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647664.1
3UTR CCA 72 bp GTACGAAGTCCCAGACCCACTTTTCCTCTTCCACTCTaGAGCAGCATCGGTGAGTTTGCGTCAGTAAGCTAT +
Preference number: 3 (lower is better)
Translates to: VRSPRPTFPLPL*SSIGEFASVSY
Trigger: ATAGCTTACTGACGCAAACTCACCGATGCTGCTCCAGAGTGGAAGAGGAAAAGTGGGTCTGGGACTTCGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647664.1
3UTR CCA 72 bp CTGGGCTTACACACACTAGTCACCTCCAACCTACTCTaGTCTTCAGGTGAAGAAGAAGCTCTACGAGGAGAT +
Preference number: 3 (lower is better)
Translates to: LGLHTLVTSNLL*SSGEEEALRGD
Trigger: ATCTCCTCGTAGAGCTTCTTCTTCACCTGAAGACCAGAGTAGGTTGGAGGTGACTAGTGTGTGTAAGCCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647664.1
3UTR TCA 72 bp TGGTCTTCAGGTGAAGAAGAAGCTCTACGAGGAGATTaGCCAGAATGTGGGTTTCAGCCGCACACCAACTAT +
Preference number: 3 (lower is better)
Translates to: WSSGEEEALRGD*PECGFQPHTNY
Trigger: ATAGTTGGTGTGCGGCTGAAACCCACATTCTGGTCAATCTCCTCGTAGAGCTTCTTCTTCACCTGAAGACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647664.1
CDS-3UTR GCA 90 bp CTCCTCCTGCTGGAGGCCACCATCCGAGAGGTGCTTCGCCTCAGGCCCGTGGCCGGTTCGACCTGGAGGTaGCAGATGATGGGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: LLLLEATIREVLRLRPVAGSTWR*QMMGSC
Trigger: GCAGCTGCCCATCATCTGGCACCTCCAGGTCGAACC...GGCCACGGGCCTGAGGCGAAGCACCTCTCGGATGGTGGCCTCCAGCAGGAGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647664.1
CDS-3UTR GCA 90 bp CTCCTCCTGCTGGAGGCCACCATCCGAGAGGTGCTTCGCCTCAGGCCCGTGGCCGGACCCTGGCCTTCCTaGTGCACAATCCTCAGGTGT +
Preference number: 4 (lower is better)
Translates to: LLLLEATIREVLRLRPVAGPWPS*CTILRC
Trigger: ACACCTGAGGATTGTGCAGCAGGAAGGCCAGGGTCC...GGCCACGGGCCTGAGGCGAAGCACCTCTCGGATGGTGGCCTCCAGCAGGAGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647664.1
CDS-3UTR CCA 90 bp CTCCTCCTGCTGGAGGCCACCATCCGAGAGGTGCTTCGCCTCAGGCCCGTGGCCAGCCAGCCCAATCTCTaGGCTCCAGAGAAAGGGAGA +
Preference number: 4 (lower is better)
Translates to: LLLLEATIREVLRLRPVASQPNL*APEKGR
Trigger: TCTCCCTTTCTCTGGAGCCCAGAGATTGGGCTGGCT...GGCCACGGGCCTGAGGCGAAGCACCTCTCGGATGGTGGCCTCCAGCAGGAGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647664.1
CDS-3UTR GCA 90 bp AGTCCGCTGTCTGTTTCCTCATACGGAACAGTGAGACTTGAAGGCCCGCAGGGTTCCCCCTCCTGCTCCTaGTCCTCCGCCACGGCGCCG +
Preference number: 4 (lower is better)
Translates to: SPLSVSSYGTVRLEGPQGSPSCS*SSATAP
Trigger: CGGCGCCGTGGCGGAGGAGCAGGAGCAGGAGGGGGA...ACCCTGCGGGCCTTCAAGTCTCACTGTTCCGTATGAGGAAACAGACAGCGGACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448841.7
CDS-3UTR TCA 90 bp AGTCCGCTGTCTGTTTCCTCATACGGAACAGTGAGACTTGAAGGCCCGCAGGGTCCCGGGCGCTGGTACTaGGGACCAGCAGCAGCCGAG +
Preference number: 4 (lower is better)
Translates to: SPLSVSSYGTVRLEGPQGPGRWY*GPAAAE
Trigger: CTCGGCTGCTGCTGGTCCTCAGTACCAGCGCCCGGG...ACCCTGCGGGCCTTCAAGTCTCACTGTTCCGTATGAGGAAACAGACAGCGGACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369889.5
ENST00000448841.7
CDS-3UTR GCA 90 bp GCCCCTATGCTCATCCCCCACAAGGCCAACGTTGACTCCAGGTGTGCCTGCCCTCCAGGAGGCCGAGGCTaGAGTGATCTGAGATCGTGC +
Preference number: 4 (lower is better)
Translates to: APMLIPHKANVDSRCACPPGGRG*SDLRSC
Trigger: GCACGATCTCAGATCACTGCAGCCTCGGCCTCCTGG...AGGGCAGGCACACCTGGAGTCAACGTTGGCCTTGTGGGGGATGAGCATAGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647664.1
CDS-3UTR GCA 90 bp GCCCCTATGCTCATCCCCCACAAGGCCAACGTTGACTCCAGGTGTGCCTGCCCTGCATTCAACACTGCTTaGCAGCCCACCTGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: APMLIPHKANVDSRCACPAFNTA*QPTWLP
Trigger: GGGGAGCCAGGTGGGCTGGCAAGCAGTGTTGAATGC...AGGGCAGGCACACCTGGAGTCAACGTTGGCCTTGTGGGGGATGAGCATAGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647664.1
CDS-3UTR GCA 90 bp AACCGTCTCCTCCTGCTGGAGGCCACCATCCGAGAGGTGCTTCGCCTCAGGCCCCTCTCAGGCTTTCTGTaGAGGAAGACTAGGCCTGCC +
Preference number: 4 (lower is better)
Translates to: NRLLLLEATIREVLRLRPLSGFL*RKTRPA
Trigger: GGCAGGCCTAGTCTTCCTGCACAGAAAGCCTGAGAG...GGGCCTGAGGCGAAGCACCTCTCGGATGGTGGCCTCCAGCAGGAGGAGACGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647664.1
CDS-3UTR CCA 90 bp AGTCCGCTGTCTGTTTCCTCATACGGAACAGTGAGACTTGAAGGCCCGCAGGGTCCCCCTGGGATCCCCTaGTGGGATCGATGCCCGGGG +
Preference number: 4 (lower is better)
Translates to: SPLSVSSYGTVRLEGPQGPPGIP*WDRCPG
Trigger: CCCCGGGCATCGATCCCACCAGGGGATCCCAGGGGG...ACCCTGCGGGCCTTCAAGTCTCACTGTTCCGTATGAGGAAACAGACAGCGGACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369889.5
ENST00000448841.7
3UTR CAA 72 bp CCGTGGCCCCTATGCTCATCCCCCACAAGGCCAACGTaGACTCCAGGTGTGCCTGCCCTCCCAGTGACATCT +
Preference number: 4 (lower is better)
Translates to: PWPLCSSPTRPT*TPGVPALPVTS
Trigger: AGATGTCACTGGGAGGGCAGGCACACCTGGAGTCAACGTTGGCCTTGTGGGGGATGAGCATAGGGGCCACGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647664.1
CDS-3UTR TCA 90 bp AACCGTCTCCTCCTGCTGGAGGCCACCATCCGAGAGGTGCTTCGCCTCAGGCCCCTGGAGCAGCATCGGTaGGTTTGCGTCAGTAAGCTA +
Preference number: 4 (lower is better)
Translates to: NRLLLLEATIREVLRLRPLEQHR*VCVSKL
Trigger: TAGCTTACTGACGCAAACTCACCGATGCTGCTCCAG...GGGCCTGAGGCGAAGCACCTCTCGGATGGTGGCCTCCAGCAGGAGGAGACGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647664.1
CDS-3UTR TCA 90 bp ATGCTCATCCCCCACAAGGCCAACGTTGACTCCAGGTGTGCCTGCCCTCCCAGTGGTGGGCAGATCACCTaGGGTTGGGAGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: MLIPHKANVDSRCACPPSGGQIT*GWEFET
Trigger: GGTCTCGAACTCCCAACCTCAGGTGATCTGCCCACC...ACTGGGAGGGCAGGCACACCTGGAGTCAACGTTGGCCTTGTGGGGGATGAGCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647664.1
CDS-3UTR GCA 90 bp AGTCCGCTGTCTGTTTCCTCATACGGAACAGTGAGACTTGAAGGCCCGCAGGGTCGATGCCCGGGGGACTaGCACCTGCAGGGCCACACT +
Preference number: 4 (lower is better)
Translates to: SPLSVSSYGTVRLEGPQGRCPGD*HLQGHT
Trigger: AGTGTGGCCCTGCAGGTGGCAGTCCCCCGGGCATCG...ACCCTGCGGGCCTTCAAGTCTCACTGTTCCGTATGAGGAAACAGACAGCGGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369889.5
ENST00000448841.7
CDS-3UTR GCA 90 bp AGTCCGCTGTCTGTTTCCTCATACGGAACAGTGAGACTTGAAGGCCCGCAGGGTGTTCAGCAGCAGGCATaGGGGCGGCCGTGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: SPLSVSSYGTVRLEGPQGVQQQA*GRPWQV
Trigger: CACCTGCCACGGCCGCCCGCATGCCTGCTGCTGAAC...ACCCTGCGGGCCTTCAAGTCTCACTGTTCCGTATGAGGAAACAGACAGCGGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369889.5
ENST00000448841.7
CDS-3UTR GCA 90 bp TACAGACACGCATTGACTCATCCACAGATCTGCCTGACTTCCCAGAGGAGCTTCTCCCCCTCCTGCTCCTaGTCCTCCGCCACGGCGCCG +
Preference number: 4 (lower is better)
Translates to: YRHALTHPQICLTSQRSFSPSCS*SSATAP
Trigger: CGGCGCCGTGGCGGAGGAGCAGGAGCAGGAGGGGGA...GAAGCTCCTCTGGGAAGTCAGGCAGATCTGTGGATGAGTCAATGCGTGTCTGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647664.1
CDS-3UTR GCA 90 bp ATGCTCATCCCCCACAAGGCCAACGTTGACTCCAGGTGTGCCTGCCCTCCCAGTGTAACCGTCTCCTCCTaGTGGAGGCCACCATCCGAG +
Preference number: 4 (lower is better)
Translates to: MLIPHKANVDSRCACPPSVTVSS*WRPPSE
Trigger: CTCGGATGGTGGCCTCCAGCAGGAGGAGACGGTTAC...ACTGGGAGGGCAGGCACACCTGGAGTCAACGTTGGCCTTGTGGGGGATGAGCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647664.1
CDS-3UTR GCA 90 bp ATGCTCATCCCCCACAAGGCCAACGTTGACTCCAGGTGTGCCTGCCCTCCCAGTAAGAGGGCCCGGGGCTaGCTCCTACCTCCACAAGTT +
Preference number: 4 (lower is better)
Translates to: MLIPHKANVDSRCACPPSKRARG*LLPPQV
Trigger: AACTTGTGGAGGTAGGAGGCAGCCCCGGGCCCTCTT...ACTGGGAGGGCAGGCACACCTGGAGTCAACGTTGGCCTTGTGGGGGATGAGCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647664.1
CDS-3UTR CCA 90 bp AGTCCGCTGTCTGTTTCCTCATACGGAACAGTGAGACTTGAAGGCCCGCAGGGTCCTGGGATCCCCTGGTaGGATCGATGCCCGGGGGAC +
Preference number: 4 (lower is better)
Translates to: SPLSVSSYGTVRLEGPQGPGIPW*DRCPGD
Trigger: GTCCCCCGGGCATCGATCCCACCAGGGGATCCCAGG...ACCCTGCGGGCCTTCAAGTCTCACTGTTCCGTATGAGGAAACAGACAGCGGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369889.5
ENST00000448841.7
CDS-3UTR CCA 90 bp ATGCTCATCCCCCACAAGGCCAACGTTGACTCCAGGTGTGCCTGCCCTCCCAGTCCCCAGAGCCACTACTaGGAAGGGACTGGACAGGCT +
Preference number: 4 (lower is better)
Translates to: MLIPHKANVDSRCACPPSPQSHY*EGTGQA
Trigger: AGCCTGTCCAGTCCCTTCCCAGTAGTGGCTCTGGGG...ACTGGGAGGGCAGGCACACCTGGAGTCAACGTTGGCCTTGTGGGGGATGAGCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647664.1
CDS-3UTR CCA 90 bp CACAATCCTCAGGTGTGCTTCCCCCTCATTGATCCTAGACCCCAGCCAGCCCAATCTGGAAGCCGGGCCTaGGCCCCAGAGCCACTACTG +
Preference number: 4 (lower is better)
Translates to: HNPQVCFPLIDPRPQPAQSGSRA*APEPLL
Trigger: CAGTAGTGGCTCTGGGGCCCAGGCCCGGCTTCCAGA...TTGGGCTGGCTGGGGTCTAGGATCAATGAGGGGGAAGCACACCTGAGGATTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000647664.1
CDS-3UTR CCA 90 bp TTTGGGGCTGGCGTGGAGACCACCACCTCTGTGGTTAAATGGACCCTGGCCTTCACCGTCTCCTCCTGCTaGAGGCCACCATCCGAGAGG +
Preference number: 4 (lower is better)
Translates to: FGAGVETTTSVVKWTLAFTVSSC*RPPSER
Trigger: CCTCTCGGATGGTGGCCTCCAGCAGGAGGAGACGGT...GAAGGCCAGGGTCCATTTAACCACAGAGGTGGTGGTCTCCACGCCAGCCCCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647664.1
CDS-3UTR TCA 90 bp GCGCTGCAGCTCCAAACGCACACCCACATACACTGCCAGACACCAAAGTCCACACCACAAGGCCAACGTTaGCTCCAGGTGTGCCTGCCC +
Preference number: 4 (lower is better)
Translates to: ALQLQTHTHIHCQTPKSTPQGQR*LQVCLP
Trigger: GGGCAGGCACACCTGGAGTCAACGTTGGCCTTGTGG...TGTGGACTTTGGTGTCTGGCAGTGTATGTGGGTGTGCGTTTGGAGCTGCAGCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647664.1
CDS-3UTR GCA 90 bp AGTCCGCTGTCTGTTTCCTCATACGGAACAGTGAGACTTGAAGGCCCGCAGGGTGGAGCAGGAGCGCCATaGCACCCAGGAGCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: SPLSVSSYGTVRLEGPQGGAGAP*HPGAFS
Trigger: GGAGAAGGCTCCTGGGTGGCATGGCGCTCCTGCTCC...ACCCTGCGGGCCTTCAAGTCTCACTGTTCCGTATGAGGAAACAGACAGCGGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448841.7
CDS-3UTR CCA 90 bp AGTCCGCTGTCTGTTTCCTCATACGGAACAGTGAGACTTGAAGGCCCGCAGGGTCTGCTCTGTGCCCCCTaGGATCCCCTGGTGGGATCG +
Preference number: 4 (lower is better)
Translates to: SPLSVSSYGTVRLEGPQGLLCAP*DPLVGS
Trigger: CGATCCCACCAGGGGATCCCAGGGGGCACAGAGCAG...ACCCTGCGGGCCTTCAAGTCTCACTGTTCCGTATGAGGAAACAGACAGCGGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369889.5
ENST00000448841.7
CDS-3UTR CCA 90 bp GCCCCTATGCTCATCCCCCACAAGGCCAACGTTGACTCCAGGTGTGCCTGCCCTGAGCAAGACCCAATCTaGCTCCAGCACAGGTGTTCC +
Preference number: 4 (lower is better)
Translates to: APMLIPHKANVDSRCACPEQDPI*LQHRCS
Trigger: GGAACACCTGTGCTGGAGCCAGATTGGGTCTTGCTC...AGGGCAGGCACACCTGGAGTCAACGTTGGCCTTGTGGGGGATGAGCATAGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647664.1
CDS-3UTR TCA 90 bp AGTCCGCTGTCTGTTTCCTCATACGGAACAGTGAGACTTGAAGGCCCGCAGGGTTGCCCGAGTCACCTGTaGAGCGGCGATGTCTCCCAG +
Preference number: 4 (lower is better)
Translates to: SPLSVSSYGTVRLEGPQGCPSHL*SGDVSQ
Trigger: CTGGGAGACATCGCCGCTTCACAGGTGACTCGGGCA...ACCCTGCGGGCCTTCAAGTCTCACTGTTCCGTATGAGGAAACAGACAGCGGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369889.5
ENST00000448841.7
CDS-3UTR TCA 90 bp GCCCCTATGCTCATCCCCCACAAGGCCAACGTTGACTCCAGGTGTGCCTGCCCTCCACTGCACTCCAGCTaGAATAAAATGGCAGCGCTG +
Preference number: 4 (lower is better)
Translates to: APMLIPHKANVDSRCACPPLHSS*NKMAAL
Trigger: CAGCGCTGCCATTTTATTTCAGCTGGAGTGCAGTGG...AGGGCAGGCACACCTGGAGTCAACGTTGGCCTTGTGGGGGATGAGCATAGGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000647664.1
CDS-3UTR TCA 90 bp TCCCCCACAAGGCCAACGTTGACTCCAGGTGTGCCTGCCCTCCCAGTGACATCTACATGTGGTCTGGGATaGAAGGCTGGGAGCTCCATG +
Preference number: 4 (lower is better)
Translates to: SPTRPTLTPGVPALPVTSTCGLG*KAGSSM
Trigger: CATGGAGCTCCCAGCCTTTCATCCCAGACCACATGT...AGATGTCACTGGGAGGGCAGGCACACCTGGAGTCAACGTTGGCCTTGTGGGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647664.1
CDS-3UTR TCA 90 bp ACGTTGACTCCAGGTGTGCCTGCCCTCCCAGTGACATCTAGCCCCATGATGCATGAGGCGGGTGGATCATaGGGTCAGGGGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: TLTPGVPALPVTSSPMMHEAGGS*GQGFKT
Trigger: GGTCTTGAACCCCTGACCTCATGATCCACCCGCCTC...ATGCATCATGGGGCTAGATGTCACTGGGAGGGCAGGCACACCTGGAGTCAACGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647664.1
CDS-3UTR GCA 90 bp AGTCCGCTGTCTGTTTCCTCATACGGAACAGTGAGACTTGAAGGCCCGCAGGGTTGGTGGGCCTGTGTGTaGGGTGGTCCTGGTTCACCG +
Preference number: 4 (lower is better)
Translates to: SPLSVSSYGTVRLEGPQGWWACV*GGPGSP
Trigger: CGGTGAACCAGGACCACCGCACACACAGGCCCACCA...ACCCTGCGGGCCTTCAAGTCTCACTGTTCCGTATGAGGAAACAGACAGCGGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369889.5
CDS-3UTR GCA 90 bp AGTCCGCTGTCTGTTTCCTCATACGGAACAGTGAGACTTGAAGGCCCGCAGGGTGGCCCGCAGGGTGTGTaGTTGCGATGCAGGCTGACA +
Preference number: 4 (lower is better)
Translates to: SPLSVSSYGTVRLEGPQGGPQGV*LRCRLT
Trigger: TGTCAGCCTGCATCGCAAGCACACACCCTGCGGGCC...ACCCTGCGGGCCTTCAAGTCTCACTGTTCCGTATGAGGAAACAGACAGCGGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369889.5
ENST00000448841.7
CDS-3UTR GCA 90 bp AGTCCGCTGTCTGTTTCCTCATACGGAACAGTGAGACTTGAAGGCCCGCAGGGTGGCCTTCCGGATGGCTaGTTTCACCTCCTGCCTGGG +
Preference number: 4 (lower is better)
Translates to: SPLSVSSYGTVRLEGPQGGLPDG*FHLLPG
Trigger: CCCAGGCAGGAGGTGAAAGCAGCCATCCGGAAGGCC...ACCCTGCGGGCCTTCAAGTCTCACTGTTCCGTATGAGGAAACAGACAGCGGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369889.5
ENST00000448841.7
CDS-3UTR GCA 90 bp GAGCAAGGAAGGGAGTACGAAGTCCCAGACCCACTTTTCCTCTTCCACTCTGGAGGAGCAGGAGCGCCATaGCACCCAGGAGCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: EQGREYEVPDPLFLFHSGGAGAP*HPGAFS
Trigger: GGAGAAGGCTCCTGGGTGGCATGGCGCTCCTGCTCC...TCCAGAGTGGAAGAGGAAAAGTGGGTCTGGGACTTCGTACTCCCTTCCTTGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647664.1
CDS-3UTR GCA 90 bp ACGTTGACTCCAGGTGTGCCTGCCCTCCCAGTGACATCTAGCCCCATGATGCATCCGGGAGGCGGAGATTaGAGTGAGCCAAGATTGCGC +
Preference number: 4 (lower is better)
Translates to: TLTPGVPALPVTSSPMMHPGGGD*SEPRLR
Trigger: GCGCAATCTTGGCTCACTGCAATCTCCGCCTCCCGG...ATGCATCATGGGGCTAGATGTCACTGGGAGGGCAGGCACACCTGGAGTCAACGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647664.1
CDS-3UTR GCA 90 bp TCCCCCACAAGGCCAACGTTGACTCCAGGTGTGCCTGCCCTCCCAGTGACATCTGCACATAACATGCGCTaGAGCTCCAAACGCACACCC +
Preference number: 4 (lower is better)
Translates to: SPTRPTLTPGVPALPVTSAHNMR*SSKRTP
Trigger: GGGTGTGCGTTTGGAGCTGCAGCGCATGTTATGTGC...AGATGTCACTGGGAGGGCAGGCACACCTGGAGTCAACGTTGGCCTTGTGGGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647664.1
CDS-3UTR CCA 90 bp AGTCCGCTGTCTGTTTCCTCATACGGAACAGTGAGACTTGAAGGCCCGCAGGGTGGCCTGTGTGTGCGGTaGTCCTGGTTCACCGGCCTT +
Preference number: 4 (lower is better)
Translates to: SPLSVSSYGTVRLEGPQGGLCVR*SWFTGL
Trigger: AAGGCCGGTGAACCAGGACCACCGCACACACAGGCC...ACCCTGCGGGCCTTCAAGTCTCACTGTTCCGTATGAGGAAACAGACAGCGGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369889.5
CDS-3UTR CCA 90 bp AGTCCGCTGTCTGTTTCCTCATACGGAACAGTGAGACTTGAAGGCCCGCAGGGTCCAGGGCCTTCCGGATaGCTGCTTTCACCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: SPLSVSSYGTVRLEGPQGPGPSG*LLSPPA
Trigger: GGCAGGAGGTGAAAGCAGCCATCCGGAAGGCCCTGG...ACCCTGCGGGCCTTCAAGTCTCACTGTTCCGTATGAGGAAACAGACAGCGGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369889.5
ENST00000448841.7
CDS-3UTR CCA 90 bp ACAGATGGGGCTCCTTCCTTATTAATGTCTCCCAACCTCACCCAACCCAGGAGAAGCTGCCCCATCTTCTaGAAGCCGGGCCTGGGCCCC +
Preference number: 4 (lower is better)
Translates to: TDGAPSLLMSPNLTQPRRSCPIF*KPGLGP
Trigger: GGGGCCCAGGCCCGGCTTCCAGAAGATGGGGCAGCT...TCTCCTGGGTTGGGTGAGGTTGGGAGACATTAATAAGGAAGGAGCCCCATCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647664.1
CDS-3UTR CCA 90 bp CCTGCCCTCCCAGTGACATCTAGCCCCATGATGCATTCAACACTGCTTGCCAGCTCTTTGGGGCTGGCGTaGAGACCACCACCTCTGTGG +
Preference number: 4 (lower is better)
Translates to: PALPVTSSPMMHSTLLASSLGLA*RPPPLW
Trigger: CCACAGAGGTGGTGGTCTCCACGCCAGCCCCAAAGA...GCTGGCAAGCAGTGTTGAATGCATCATGGGGCTAGATGTCACTGGGAGGGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647664.1
CDS-3UTR CCA 90 bp CACAATCCTCAGGTGTGCTTCCCCCTCATTGATCCTAGACCCCAGCCAGCCCAAGGACATCTTTGGGGCTaGCGTGGAGACCACCACCTC +
Preference number: 4 (lower is better)
Translates to: HNPQVCFPLIDPRPQPAQGHLWG*RGDHHL
Trigger: GAGGTGGTGGTCTCCACGCCAGCCCCAAAGATGTCC...TTGGGCTGGCTGGGGTCTAGGATCAATGAGGGGGAAGCACACCTGAGGATTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000647664.1
CDS-3UTR TCA 90 bp AGTCCGCTGTCTGTTTCCTCATACGGAACAGTGAGACTTGAAGGCCCGCAGGGTCGGAACAGTGAGACTTaGAGGCCCGCAGGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: SPLSVSSYGTVRLEGPQGRNSET*RPAGCV
Trigger: CACACACCCTGCGGGCCTTCAAGTCTCACTGTTCCG...ACCCTGCGGGCCTTCAAGTCTCACTGTTCCGTATGAGGAAACAGACAGCGGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369889.5
ENST00000448841.7
CDS-3UTR TCA 90 bp AGTCCGCTGTCTGTTTCCTCATACGGAACAGTGAGACTTGAAGGCCCGCAGGGTTCGCAGCTCAGCTGGTaGCCTGAAGGCGAGCAACAG +
Preference number: 4 (lower is better)
Translates to: SPLSVSSYGTVRLEGPQGSQLSW*PEGEQQ
Trigger: CTGTTGCTCGCCTTCAGGTCACCAGCTGAGCTGCGA...ACCCTGCGGGCCTTCAAGTCTCACTGTTCCGTATGAGGAAACAGACAGCGGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369889.5
ENST00000448841.7
CDS-3UTR TCA 90 bp AGTCCGCTGTCTGTTTCCTCATACGGAACAGTGAGACTTGAAGGCCCGCAGGGTGCATCTGAGGGGCTGTaGCACACTCCGGCTACCTCT +
Preference number: 4 (lower is better)
Translates to: SPLSVSSYGTVRLEGPQGASEGL*HTPATS
Trigger: AGAGGTAGCCGGAGTGTGTCACAGCCCCTCAGATGC...ACCCTGCGGGCCTTCAAGTCTCACTGTTCCGTATGAGGAAACAGACAGCGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369889.5
ENST00000448841.7
CDS-3UTR TCA 90 bp ACGTTGACTCCAGGTGTGCCTGCCCTCCCAGTGACATCTAGCCCCATGATGCATGGCAGGAGAATCACTTaGACCAAGGCGGCGGAGGTT +
Preference number: 4 (lower is better)
Translates to: TLTPGVPALPVTSSPMMHGRRIT*TKAAEV
Trigger: AACCTCCGCCGCCTTGGTTCAAGTGATTCTCCTGCC...ATGCATCATGGGGCTAGATGTCACTGGGAGGGCAGGCACACCTGGAGTCAACGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647664.1
CDS-3UTR GCA 90 bp AGTCCGCTGTCTGTTTCCTCATACGGAACAGTGAGACTTGAAGGCCCGCAGGGTGGAGGCAGCAGCTGCTaGTGCTGTAGCTGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: SPLSVSSYGTVRLEGPQGGGSSC*CCSWKA
Trigger: TGCCTTCCAGCTACAGCAGCAGCAGCTGCTGCCTCC...ACCCTGCGGGCCTTCAAGTCTCACTGTTCCGTATGAGGAAACAGACAGCGGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369889.5
ENST00000448841.7
CDS-3UTR GCA 90 bp AGTCCGCTGTCTGTTTCCTCATACGGAACAGTGAGACTTGAAGGCCCGCAGGGTGGTGTGTGCTTGCGATaGAGGCTGACACGGGTCACC +
Preference number: 4 (lower is better)
Translates to: SPLSVSSYGTVRLEGPQGGVCLR*RLTRVT
Trigger: GGTGACCCGTGTCAGCCTGCATCGCAAGCACACACC...ACCCTGCGGGCCTTCAAGTCTCACTGTTCCGTATGAGGAAACAGACAGCGGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369889.5
ENST00000448841.7
CDS-3UTR GCA 90 bp AGTCCGCTGTCTGTTTCCTCATACGGAACAGTGAGACTTGAAGGCCCGCAGGGTGCTGCTTTCACCTCCTaGCTGGGCCACCGAGTCTCT +
Preference number: 4 (lower is better)
Translates to: SPLSVSSYGTVRLEGPQGAAFTS*LGHRVS
Trigger: AGAGACTCGGTGGCCCAGGCAGGAGGTGAAAGCAGC...ACCCTGCGGGCCTTCAAGTCTCACTGTTCCGTATGAGGAAACAGACAGCGGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369889.5
ENST00000448841.7
CDS-3UTR GCA 90 bp TTTGGGGCTGGCGTGGAGACCACCACCTCTGTGGTTAAATGGACCCTGGCCTTCAGTTCAAGACCAGCCTaGCCAACGTGGCGAAACCTC +
Preference number: 4 (lower is better)
Translates to: FGAGVETTTSVVKWTLAFSSRPA*PTWRNL
Trigger: GAGGTTTCGCCACGTTGGGCAGGCTGGTCTTGAACT...GAAGGCCAGGGTCCATTTAACCACAGAGGTGGTGGTCTCCACGCCAGCCCCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647664.1
CDS-3UTR GCA 90 bp TCCCCCACAAGGCCAACGTTGACTCCAGGTGTGCCTGCCCTCCCAGTGACATCTACTCATCCACAGATCTaGCTGACTTCCCAGAGGAGC +
Preference number: 4 (lower is better)
Translates to: SPTRPTLTPGVPALPVTSTHPQI*LTSQRS
Trigger: GCTCCTCTGGGAAGTCAGGCAGATCTGTGGATGAGT...AGATGTCACTGGGAGGGCAGGCACACCTGGAGTCAACGTTGGCCTTGTGGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647664.1
CDS-3UTR GCA 90 bp TGGCTCCATGTCTCTACCACCTACAGACACGCATTGACTCATCCACAGATCTGCCCACCATCCGAGAGGTaGTTCGCCTCAGGCCCGTGG +
Preference number: 4 (lower is better)
Translates to: WLHVSTTYRHALTHPQICPPSER*FASGPW
Trigger: CCACGGGCCTGAGGCGAAGCACCTCTCGGATGGTGG...GCAGATCTGTGGATGAGTCAATGCGTGTCTGTAGGTGGTAGAGACATGGAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647664.1
CDS-3UTR GCA 90 bp GACATCTTTGGGGCTGGCGTGGAGACCACCACCTCTGTGGTTAAATGGACCCTGCCCTGGCCTTCCTGCTaGACAATCCTCAGGTGTGCT +
Preference number: 4 (lower is better)
Translates to: DIFGAGVETTTSVVKWTLPWPSC*TILRCA
Trigger: AGCACACCTGAGGATTGTGCAGCAGGAAGGCCAGGG...CAGGGTCCATTTAACCACAGAGGTGGTGGTCTCCACGCCAGCCCCAAAGATGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647664.1
CDS-3UTR CCA 90 bp AGTCCGCTGTCTGTTTCCTCATACGGAACAGTGAGACTTGAAGGCCCGCAGGGTCCATCCCTGGGGCTTTaGTGGCTGCTCGGTCAACTG +
Preference number: 4 (lower is better)
Translates to: SPLSVSSYGTVRLEGPQGPSLGL*WLLGQL
Trigger: CAGTTGACCGAGCAGCCACCAAAGCCCCAGGGATGG...ACCCTGCGGGCCTTCAAGTCTCACTGTTCCGTATGAGGAAACAGACAGCGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369889.5
ENST00000448841.7
CDS-3UTR CCA 90 bp ACAGATGGGGCTCCTTCCTTATTAATGTCTCCCAACCTCACCCAACCCAGGAGAGGCAGCTGCCCTCCCTaGAAGGCATCCCCAAGGTGG +
Preference number: 4 (lower is better)
Translates to: TDGAPSLLMSPNLTQPRRGSCPP*KASPRW
Trigger: CCACCTTGGGGATGCCTTCCAGGGAGGGCAGCTGCC...TCTCCTGGGTTGGGTGAGGTTGGGAGACATTAATAAGGAAGGAGCCCCATCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647664.1
3UTR CAA 72 bp TCCTGCTGCACAATCCTCAGGTGTGCTTCCCCCTCATaGATCCTAGACCCCAGCCAGCCCAATCTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: SCCTILRCASPS*ILDPSQPNLWA
Trigger: AGCCCAGAGATTGGGCTGGCTGGGGTCTAGGATCAATGAGGGGGAAGCACACCTGAGGATTGTGCAGCAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647664.1
CDS-3UTR TCA 90 bp AGTCCGCTGTCTGTTTCCTCATACGGAACAGTGAGACTTGAAGGCCCGCAGGGTCCTCATACGGAACAGTaGGACTTGAAGGCCCGCAGG +
Preference number: 4 (lower is better)
Translates to: SPLSVSSYGTVRLEGPQGPHTEQ*DLKARR
Trigger: CCTGCGGGCCTTCAAGTCTCACTGTTCCGTATGAGG...ACCCTGCGGGCCTTCAAGTCTCACTGTTCCGTATGAGGAAACAGACAGCGGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369889.5
ENST00000448841.7
CDS-3UTR TCA 90 bp GACATCTTTGGGGCTGGCGTGGAGACCACCACCTCTGTGGTTAAATGGACCCTGGACAGGAGAATCACTTaGACCCGGGAGGCGGAGATT +
Preference number: 4 (lower is better)
Translates to: DIFGAGVETTTSVVKWTLDRRIT*TREAEI
Trigger: AATCTCCGCCTCCCGGGTTCAAGTGATTCTCCTGTC...CAGGGTCCATTTAACCACAGAGGTGGTGGTCTCCACGCCAGCCCCAAAGATGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647664.1
CDS-3UTR TCA 90 bp GCCCCTATGCTCATCCCCCACAAGGCCAACGTTGACTCCAGGTGTGCCTGCCCTGTTGGGATCGAAAAGTaGGGAACTGAAGAGGATCCT +
Preference number: 4 (lower is better)
Translates to: APMLIPHKANVDSRCACPVGIEK*GTEEDP
Trigger: AGGATCCTCTTCAGTTCCTCACTTTTCGATCCCAAC...AGGGCAGGCACACCTGGAGTCAACGTTGGCCTTGTGGGGGATGAGCATAGGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000647664.1
CDS-3UTR GCA 90 bp AGTCCGCTGTCTGTTTCCTCATACGGAACAGTGAGACTTGAAGGCCCGCAGGGTCTCTTTGCTGTCGGGTaGGCCGTGTTCAGAGCTGTC +
Preference number: 4 (lower is better)
Translates to: SPLSVSSYGTVRLEGPQGLFAVG*AVFRAV
Trigger: GACAGCTCTGAACACGGCGCACCCGACAGCAAAGAG...ACCCTGCGGGCCTTCAAGTCTCACTGTTCCGTATGAGGAAACAGACAGCGGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369889.5
ENST00000448841.7
CDS-3UTR GCA 90 bp AGTCCGCTGTCTGTTTCCTCATACGGAACAGTGAGACTTGAAGGCCCGCAGGGTCAGGCGTCTTCTCTTTaGTGTCGGGTGCGCCGTGTT +
Preference number: 4 (lower is better)
Translates to: SPLSVSSYGTVRLEGPQGQASSL*CRVRRV
Trigger: AACACGGCGCACCCGACAGCAAAGAGAAGACGCCTG...ACCCTGCGGGCCTTCAAGTCTCACTGTTCCGTATGAGGAAACAGACAGCGGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369889.5
ENST00000448841.7
CDS-3UTR GCA 90 bp AGTCCGCTGTCTGTTTCCTCATACGGAACAGTGAGACTTGAAGGCCCGCAGGGTGGCCACACGCCAGCTTaGTTGTGCCTGTTGGACTCA +
Preference number: 4 (lower is better)
Translates to: SPLSVSSYGTVRLEGPQGGHTPA*LCLLDS
Trigger: TGAGTCCAACAGGCACAAGCAAGCTGGCGTGTGGCC...ACCCTGCGGGCCTTCAAGTCTCACTGTTCCGTATGAGGAAACAGACAGCGGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369889.5
ENST00000448841.7
CDS-3UTR GCA 90 bp AGTCCGCTGTCTGTTTCCTCATACGGAACAGTGAGACTTGAAGGCCCGCAGGGTCCCAGCTCCGCAGGTTaGATTTCCGTCTTCTCGTGC +
Preference number: 4 (lower is better)
Translates to: SPLSVSSYGTVRLEGPQGPSSAG*ISVFSC
Trigger: GCACGAGAAGACGGAAATGCAACCTGCGGAGCTGGG...ACCCTGCGGGCCTTCAAGTCTCACTGTTCCGTATGAGGAAACAGACAGCGGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369889.5
ENST00000448841.7
CDS-3UTR GCA 90 bp TGGCTCCATGTCTCTACCACCTACAGACACGCATTGACTCATCCACAGATCTGCCTGAGGTGGGAGGATTaGTGGACCCCAGGAGGCCGA +
Preference number: 4 (lower is better)
Translates to: WLHVSTTYRHALTHPQICLRWED*WTPGGR
Trigger: TCGGCCTCCTGGGGTCCAGCAATCCTCCCACCTCAG...GCAGATCTGTGGATGAGTCAATGCGTGTCTGTAGGTGGTAGAGACATGGAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647664.1
CDS-3UTR CCA 90 bp AGTCCGCTGTCTGTTTCCTCATACGGAACAGTGAGACTTGAAGGCCCGCAGGGTTCCCTGGGGCTTTGGTaGCTGCTCGGTCAACTGGTA +
Preference number: 4 (lower is better)
Translates to: SPLSVSSYGTVRLEGPQGSLGLW*LLGQLV
Trigger: TACCAGTTGACCGAGCAGCCACCAAAGCCCCAGGGA...ACCCTGCGGGCCTTCAAGTCTCACTGTTCCGTATGAGGAAACAGACAGCGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369889.5
ENST00000448841.7
CDS-3UTR CCA 90 bp AGTCCGCTGTCTGTTTCCTCATACGGAACAGTGAGACTTGAAGGCCCGCAGGGTAGGTCATCGTCATGGTaGCCCCGGTTGCACACACAC +
Preference number: 4 (lower is better)
Translates to: SPLSVSSYGTVRLEGPQGRSSSW*PRLHTH
Trigger: GTGTGTGTGCAACCGGGGCCACCATGACGATGACCT...ACCCTGCGGGCCTTCAAGTCTCACTGTTCCGTATGAGGAAACAGACAGCGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369889.5
ENST00000448841.7
CDS-3UTR CCA 90 bp AGTCCGCTGTCTGTTTCCTCATACGGAACAGTGAGACTTGAAGGCCCGCAGGGTCTTTCACCTCCTGCCTaGGCCACCGAGTCTCTACAC +
Preference number: 4 (lower is better)
Translates to: SPLSVSSYGTVRLEGPQGLSPPA*ATESLH
Trigger: GTGTAGAGACTCGGTGGCCCAGGCAGGAGGTGAAAG...ACCCTGCGGGCCTTCAAGTCTCACTGTTCCGTATGAGGAAACAGACAGCGGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369889.5
ENST00000448841.7
CDS-3UTR CCA 90 bp GACATCTTTGGGGCTGGCGTGGAGACCACCACCTCTGTGGTTAAATGGACCCTGGCCCTCAGAGACATGTaGTCTGGGATGAAAGGCTGG +
Preference number: 4 (lower is better)
Translates to: DIFGAGVETTTSVVKWTLALRDM*SGMKGW
Trigger: CCAGCCTTTCATCCCAGACCACATGTCTCTGAGGGC...CAGGGTCCATTTAACCACAGAGGTGGTGGTCTCCACGCCAGCCCCAAAGATGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647664.1
CDS-3UTR TCA 90 bp AGTCCGCTGTCTGTTTCCTCATACGGAACAGTGAGACTTGAAGGCCCGCAGGGTGTTAAGGTCTTGGAATaGGCATTGCCCCTGGTGGGC +
Preference number: 4 (lower is better)
Translates to: SPLSVSSYGTVRLEGPQGVKVLE*ALPLVG
Trigger: GCCCACCAGGGGCAATGCTCATTCCAAGACCTTAAC...ACCCTGCGGGCCTTCAAGTCTCACTGTTCCGTATGAGGAAACAGACAGCGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369889.5
CDS-3UTR TCA 90 bp ACAGATGGGGCTCCTTCCTTATTAATGTCTCCCAACCTCACCCAACCCAGGAGAAGGCCGAGGCTGCAGTaGTCTGAGATCGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: TDGAPSLLMSPNLTQPRRRPRLQ*SEIVPL
Trigger: CAGTGGCACGATCTCAGATCACTGCAGCCTCGGCCT...TCTCCTGGGTTGGGTGAGGTTGGGAGACATTAATAAGGAAGGAGCCCCATCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647664.1
CDS-3UTR TCA 90 bp ACGTTGACTCCAGGTGTGCCTGCCCTCCCAGTGACATCTAGCCCCATGATGCATCCTACAGACACGCATTaGCTCATCCACAGATCTGCC +
Preference number: 4 (lower is better)
Translates to: TLTPGVPALPVTSSPMMHPTDTH*LIHRSA
Trigger: GGCAGATCTGTGGATGAGTCAATGCGTGTCTGTAGG...ATGCATCATGGGGCTAGATGTCACTGGGAGGGCAGGCACACCTGGAGTCAACGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647664.1
CDS-3UTR GCA 90 bp AGTCCGCTGTCTGTTTCCTCATACGGAACAGTGAGACTTGAAGGCCCGCAGGGTTCTTGGAATGAGCATTaGCCCTGGTGGGCCTGTGTG +
Preference number: 4 (lower is better)
Translates to: SPLSVSSYGTVRLEGPQGSWNEH*PWWACV
Trigger: CACACAGGCCCACCAGGGGCAATGCTCATTCCAAGA...ACCCTGCGGGCCTTCAAGTCTCACTGTTCCGTATGAGGAAACAGACAGCGGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369889.5
CDS-3UTR GCA 90 bp AGTCCGCTGTCTGTTTCCTCATACGGAACAGTGAGACTTGAAGGCCCGCAGGGTCATGGTGGCCCCGGTTaGACACACACACTTCAATGC +
Preference number: 4 (lower is better)
Translates to: SPLSVSSYGTVRLEGPQGHGGPG*THTLQC
Trigger: GCATTGAAGTGTGTGTGTGCAACCGGGGCCACCATG...ACCCTGCGGGCCTTCAAGTCTCACTGTTCCGTATGAGGAAACAGACAGCGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369889.5
ENST00000448841.7
CDS-3UTR CCA 90 bp AGTCCGCTGTCTGTTTCCTCATACGGAACAGTGAGACTTGAAGGCCCGCAGGGTTGCTGCTGCTGTAGCTaGAAGGCACTGTATGGTGGG +
Preference number: 4 (lower is better)
Translates to: SPLSVSSYGTVRLEGPQGCCCCS*KALYGG
Trigger: CCCACCATACAGTGCCTTCCAGCTACAGCAGCAGCA...ACCCTGCGGGCCTTCAAGTCTCACTGTTCCGTATGAGGAAACAGACAGCGGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369889.5
ENST00000448841.7
CDS-3UTR CCA 90 bp AGTCCGCTGTCTGTTTCCTCATACGGAACAGTGAGACTTGAAGGCCCGCAGGGTTTGAGGTCATCGTCATaGTGGCCCCGGTTGCACACA +
Preference number: 4 (lower is better)
Translates to: SPLSVSSYGTVRLEGPQGLRSSS*WPRLHT
Trigger: TGTGTGCAACCGGGGCCACCATGACGATGACCTCAA...ACCCTGCGGGCCTTCAAGTCTCACTGTTCCGTATGAGGAAACAGACAGCGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369889.5
ENST00000448841.7
CDS-3UTR CCA 90 bp AGTCCGCTGTCTGTTTCCTCATACGGAACAGTGAGACTTGAAGGCCCGCAGGGTGACGTGTGGTTCACGTaGAGAGAATGGCTGCCACTC +
Preference number: 4 (lower is better)
Translates to: SPLSVSSYGTVRLEGPQGDVWFT*REWLPL
Trigger: GAGTGGCAGCCATTCTCTCCACGTGAACCACACGTC...ACCCTGCGGGCCTTCAAGTCTCACTGTTCCGTATGAGGAAACAGACAGCGGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369889.5
ENST00000448841.7
CDS-3UTR CCA 90 bp AGTCCGCTGTCTGTTTCCTCATACGGAACAGTGAGACTTGAAGGCCCGCAGGGTCTTGCTTGTGCCTGTTaGACTCACCAGAGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: SPLSVSSYGTVRLEGPQGLACAC*THQRQA
Trigger: TGCCTGCCTCTGGTGAGTCCAACAGGCACAAGCAAG...ACCCTGCGGGCCTTCAAGTCTCACTGTTCCGTATGAGGAAACAGACAGCGGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369889.5
ENST00000448841.7
CDS-3UTR CCA 90 bp AGTCCGCTGTCTGTTTCCTCATACGGAACAGTGAGACTTGAAGGCCCGCAGGGTCCCGTCTCATTCACGTaGAAAGCCAGCCTCAGTCAC +
Preference number: 4 (lower is better)
Translates to: SPLSVSSYGTVRLEGPQGPVSFT*KASLSH
Trigger: GTGACTGAGGCTGGCTTTCCACGTGAATGAGACGGG...ACCCTGCGGGCCTTCAAGTCTCACTGTTCCGTATGAGGAAACAGACAGCGGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369889.5
ENST00000448841.7
CDS-3UTR CCA 90 bp CACAATCCTCAGGTGTGCTTCCCCCTCATTGATCCTAGACCCCAGCCAGCCCAAAGCCAGGTGTGTTGGTaGGTGCTTGTTAATCCCAGC +
Preference number: 4 (lower is better)
Translates to: HNPQVCFPLIDPRPQPAQSQVCW*VLVNPS
Trigger: GCTGGGATTAACAAGCACCCACCAACACACCTGGCT...TTGGGCTGGCTGGGGTCTAGGATCAATGAGGGGGAAGCACACCTGAGGATTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647664.1
CDS-3UTR CCA 90 bp ACGTTGACTCCAGGTGTGCCTGCCCTCCCAGTGACATCTAGCCCCATGATGCATTCTGGGATGAAAGGCTaGGAGCTCCATGTTCCAACC +
Preference number: 4 (lower is better)
Translates to: TLTPGVPALPVTSSPMMHSGMKG*ELHVPT
Trigger: GGTTGGAACATGGAGCTCCCAGCCTTTCATCCCAGA...ATGCATCATGGGGCTAGATGTCACTGGGAGGGCAGGCACACCTGGAGTCAACGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647664.1
CDS-3UTR CCA 90 bp CACAATCCTCAGGTGTGCTTCCCCCTCATTGATCCTAGACCCCAGCCAGCCCAAACCTCTGTGGTTAAATaGACCCTGGCCTTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: HNPQVCFPLIDPRPQPAQTSVVK*TLAFLL
Trigger: CAGCAGGAAGGCCAGGGTCCATTTAACCACAGAGGT...TTGGGCTGGCTGGGGTCTAGGATCAATGAGGGGGAAGCACACCTGAGGATTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647664.1
3UTR CAA 72 bp CCGTGGCTCCATGTCTCTACCACCTACAGACACGCATaGACTCATCCACAGATCTGCCTGACTTCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: PWLHVSTTYRHA*THPQICLTSQR
Trigger: CCTCTGGGAAGTCAGGCAGATCTGTGGATGAGTCAATGCGTGTCTGTAGGTGGTAGAGACATGGAGCCACGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647664.1
CDS-3UTR TCA 90 bp CCTGCCCTCCCAGTGACATCTAGCCCCATGATGCATTCAACACTGCTTGCCAGCACTCTGGTCTTCAGGTaGAGAAGAAGCTCTACGAGG +
Preference number: 4 (lower is better)
Translates to: PALPVTSSPMMHSTLLASTLVFR*RRSSTR
Trigger: CCTCGTAGAGCTTCTTCTTCACCTGAAGACCAGAGT...GCTGGCAAGCAGTGTTGAATGCATCATGGGGCTAGATGTCACTGGGAGGGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647664.1
CDS-3UTR GCA 90 bp ACAGATGGGGCTCCTTCCTTATTAATGTCTCCCAACCTCACCCAACCCAGGAGATCATCATGGCCTGGCTaGTGCAGAGGTTCGACCTGG +
Preference number: 4 (lower is better)
Translates to: TDGAPSLLMSPNLTQPRRSSWPG*CRGSTW
Trigger: CCAGGTCGAACCTCTGCAGCAGCCAGGCCATGATGA...TCTCCTGGGTTGGGTGAGGTTGGGAGACATTAATAAGGAAGGAGCCCCATCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647664.1
CDS-3UTR GCA 90 bp TACAGACACGCATTGACTCATCCACAGATCTGCCTGACTTCCCAGAGGAGCTTCCAAGGCGGCGGAGGTTaGAGTGAGCCAAGATTGCAC +
Preference number: 4 (lower is better)
Translates to: YRHALTHPQICLTSQRSFQGGGG*SEPRLH
Trigger: GTGCAATCTTGGCTCACTGCAACCTCCGCCGCCTTG...GAAGCTCCTCTGGGAAGTCAGGCAGATCTGTGGATGAGTCAATGCGTGTCTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647664.1
CDS-3UTR GCA 90 bp TGGAGAAGGGCTGGATTTAGGTTTGATCTGGCAGAAGCTGAGGAAAACATGAGTGGCCCGTGGCCCCTATaGTCATCCCCCACAAGGCCA +
Preference number: 4 (lower is better)
Translates to: WRRAGFRFDLAEAEENMSGPWPL*SSPTRP
Trigger: TGGCCTTGTGGGGGATGAGCATAGGGGCCACGGGCC...ACTCATGTTTTCCTCAGCTTCTGCCAGATCAAACCTAAATCCAGCCCTTCTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000647664.1
CDS-3UTR GCA 90 bp CACAATCCTCAGGTGTGCTTCCCCCTCATTGATCCTAGACCCCAGCCAGCCCAACACAATCCTCAGGTGTaGTTCCCCCTCATTGATCCT +
Preference number: 4 (lower is better)
Translates to: HNPQVCFPLIDPRPQPAQHNPQV*FPLIDP
Trigger: AGGATCAATGAGGGGGAAGCACACCTGAGGATTGTG...TTGGGCTGGCTGGGGTCTAGGATCAATGAGGGGGAAGCACACCTGAGGATTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000647664.1
CDS-3UTR CCA 90 bp AGTCCGCTGTCTGTTTCCTCATACGGAACAGTGAGACTTGAAGGCCCGCAGGGTATGCACAGGGCCGGGTaGGGAATGTTTGTTTTGGCT +
Preference number: 4 (lower is better)
Translates to: SPLSVSSYGTVRLEGPQGMHRAG*GMFVLA
Trigger: AGCCAAAACAAACATTCCCCACCCGGCCCTGTGCAT...ACCCTGCGGGCCTTCAAGTCTCACTGTTCCGTATGAGGAAACAGACAGCGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369889.5
ENST00000448841.7
CDS-3UTR CCA 90 bp AGTCCGCTGTCTGTTTCCTCATACGGAACAGTGAGACTTGAAGGCCCGCAGGGTTGTGCTCCAGACGTGTaGTTCACGTGGAGAGAATGG +
Preference number: 4 (lower is better)
Translates to: SPLSVSSYGTVRLEGPQGCAPDV*FTWREW
Trigger: CCATTCTCTCCACGTGAACCACACGTCTGGAGCACA...ACCCTGCGGGCCTTCAAGTCTCACTGTTCCGTATGAGGAAACAGACAGCGGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369889.5
ENST00000448841.7
CDS-3UTR CCA 90 bp CCTAAAGTCAGTCAACCATCAACTACTAAAAATCATCCTGCCGGCCGGGCACGGTGCAGAGGTTCGACCTaGAGGTGCCAGATGATGGGC +
Preference number: 4 (lower is better)
Translates to: PKVSQPSTTKNHPAGRARCRGST*RCQMMG
Trigger: GCCCATCATCTGGCACCTCCAGGTCGAACCTCTGCA...CCGTGCCCGGCCGGCAGGATGATTTTTAGTAGTTGATGGTTGACTGACTTTAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647664.1
CDS-3UTR CCA 90 bp TACAGACACGCATTGACTCATCCACAGATCTGCCTGACTTCCCAGAGGAGCTTCGTCATCCCAACACTTTaGGAGGTCGAGGCGGGTGGA +
Preference number: 4 (lower is better)
Translates to: YRHALTHPQICLTSQRSFVIPTL*EVEAGG
Trigger: TCCACCCGCCTCGACCTCCCAAAGTGTTGGGATGAC...GAAGCTCCTCTGGGAAGTCAGGCAGATCTGTGGATGAGTCAATGCGTGTCTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647664.1
CDS-3UTR CCA 90 bp ATGCTCATCCCCCACAAGGCCAACGTTGACTCCAGGTGTGCCTGCCCTCCCAGTTGCTCTACTTCCAAGTaGAAGGAGCCTTGTTATCTC +
Preference number: 4 (lower is better)
Translates to: MLIPHKANVDSRCACPPSCSTSK*KEPCYL
Trigger: GAGATAACAAGGCTCCTTCCACTTGGAAGTAGAGCA...ACTGGGAGGGCAGGCACACCTGGAGTCAACGTTGGCCTTGTGGGGGATGAGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647664.1
3UTR CAA 72 bp TGGAGCAGCATCGGTGAGTTTGCGTCAGTAAGCTATTaGCCCTTCGGAGCAGGACCTCGCTCCTGTATAGGT +
Preference number: 4 (lower is better)
Translates to: WSSIGEFASVSY*PFGAGPRSCIG
Trigger: ACCTATACAGGAGCGAGGTCCTGCTCCGAAGGGCAAATAGCTTACTGACGCAAACTCACCGATGCTGCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647664.1
3UTR CAA 72 bp GGGAAGGGACTGGACAGGCTCTTCTCGATGTCACAGTaGGATTCTTCTCTAAGCCCTTGCTTCTCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: GKGLDRLFSMSQ*DSSLSPCFSWA
Trigger: AGCCCAGGAGAAGCAAGGGCTTAGAGAAGAATCCAACTGTGACATCGAGAAGAGCCTGTCCAGTCCCTTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647664.1
CDS-3UTR TCA 90 bp AGTCCGCTGTCTGTTTCCTCATACGGAACAGTGAGACTTGAAGGCCCGCAGGGTGTCCAAGCCTGTCATTaGAGACCCAGTCAAGCTTCT +
Preference number: 4 (lower is better)
Translates to: SPLSVSSYGTVRLEGPQGVQACH*RPSQAS
Trigger: AGAAGCTTGACTGGGTCTTCAATGACAGGCTTGGAC...ACCCTGCGGGCCTTCAAGTCTCACTGTTCCGTATGAGGAAACAGACAGCGGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369889.5
ENST00000448841.7
CDS-3UTR TCA 90 bp AAGTCCACAGACACAGGTGTTCAGACAGAAGCGCCTGTTAGGAGGGAAGGGATGAGTGGGAAGATCACTTaGGCCTGGGAAGTTGAGGCT +
Preference number: 4 (lower is better)
Translates to: KSTDTGVQTEAPVRREGMSGKIT*AWEVEA
Trigger: AGCCTCAACTTCCCAGGCTCAAGTGATCTTCCCACT...CATCCCTTCCCTCCTAACAGGCGCTTCTGTCTGAACACCTGTGTCTGTGGACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647664.1
CDS-3UTR TCA 90 bp CCTGCCCTCCCAGTGACATCTAGCCCCATGATGCATTCAACACTGCTTGCCAGCGGAGAAATTCCGGAGTaGCTCTATCACCAACATGCT +
Preference number: 4 (lower is better)
Translates to: PALPVTSSPMMHSTLLASGEIPE*LYHQHA
Trigger: AGCATGTTGGTGATAGAGTCACTCCGGAATTTCTCC...GCTGGCAAGCAGTGTTGAATGCATCATGGGGCTAGATGTCACTGGGAGGGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647664.1
CDS-3UTR GCA 90 bp AGTCCGCTGTCTGTTTCCTCATACGGAACAGTGAGACTTGAAGGCCCGCAGGGTAAGAAAGACTTCATATaGACAGGGCCGGGTGGGGAA +
Preference number: 4 (lower is better)
Translates to: SPLSVSSYGTVRLEGPQGKKDFI*TGPGGE
Trigger: TTCCCCACCCGGCCCTGTGCATATGAAGTCTTTCTT...ACCCTGCGGGCCTTCAAGTCTCACTGTTCCGTATGAGGAAACAGACAGCGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369889.5
ENST00000448841.7
CDS-3UTR GCA 90 bp ACGTTGACTCCAGGTGTGCCTGCCCTCCCAGTGACATCTAGCCCCATGATGCATTGTACTTTCATCACCTaGTTGGGGAGGATGAAGTGG +
Preference number: 4 (lower is better)
Translates to: TLTPGVPALPVTSSPMMHCTFIT*LGRMKW
Trigger: CCACTTCATCCTCCCCAAGCAGGTGATGAAAGTACA...ATGCATCATGGGGCTAGATGTCACTGGGAGGGCAGGCACACCTGGAGTCAACGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647664.1
CDS-3UTR GCA 90 bp AAGTCCACAGACACAGGTGTTCAGACAGAAGCGCCTGTTAGGAGGGAAGGGATGGGTCCTGCCCAGACTTaGTCTACTTCCAAGTGGAAG +
Preference number: 4 (lower is better)
Translates to: KSTDTGVQTEAPVRREGMGPAQT*STSKWK
Trigger: CTTCCACTTGGAAGTAGAGCAAGTCTGGGCAGGACC...CATCCCTTCCCTCCTAACAGGCGCTTCTGTCTGAACACCTGTGTCTGTGGACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647664.1
CDS-3UTR GCA 90 bp AAGTCCACAGACACAGGTGTTCAGACAGAAGCGCCTGTTAGGAGGGAAGGGATGCTGAGATCATGCCATTaGACTCCAGCCTGGGCATTG +
Preference number: 4 (lower is better)
Translates to: KSTDTGVQTEAPVRREGMLRSCH*TPAWAL
Trigger: CAATGCCCAGGCTGGAGTGCAATGGCATGATCTCAG...CATCCCTTCCCTCCTAACAGGCGCTTCTGTCTGAACACCTGTGTCTGTGGACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647664.1
CDS-3UTR CCA 90 bp ACGTTGACTCCAGGTGTGCCTGCCCTCCCAGTGACATCTAGCCCCATGATGCATTTTCCTCTTCCACTCTaGAGCAGCATCGGTGAGTTT +
Preference number: 4 (lower is better)
Translates to: TLTPGVPALPVTSSPMMHFPLPL*SSIGEF
Trigger: AAACTCACCGATGCTGCTCCAGAGTGGAAGAGGAAA...ATGCATCATGGGGCTAGATGTCACTGGGAGGGCAGGCACACCTGGAGTCAACGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647664.1
CDS-3UTR GCA 90 bp AGTCCGCTGTCTGTTTCCTCATACGGAACAGTGAGACTTGAAGGCCCGCAGGGTAAAGGAAAGGCATCCTaGAAGAGCATCGTCCACACT +
Preference number: 4 (lower is better)
Translates to: SPLSVSSYGTVRLEGPQGKGKAS*KSIVHT
Trigger: AGTGTGGACGATGCTCTTGCAGGATGCCTTTCCTTT...ACCCTGCGGGCCTTCAAGTCTCACTGTTCCGTATGAGGAAACAGACAGCGGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369889.5
CDS-3UTR GCA 90 bp TGGAGAAGGGCTGGATTTAGGTTTGATCTGGCAGAAGCTGAGGAAAACATGAGTCAGATGATGGGCAGCTaGCCTCCCTGGAAGGCATCC +
Preference number: 4 (lower is better)
Translates to: WRRAGFRFDLAEAEENMSQMMGS*PPWKAS
Trigger: GGATGCCTTCCAGGGAGGGCAGCTGCCCATCATCTG...ACTCATGTTTTCCTCAGCTTCTGCCAGATCAAACCTAAATCCAGCCCTTCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647664.1
CDS-3UTR GCA 90 bp TGGAGAAGGGCTGGATTTAGGTTTGATCTGGCAGAAGCTGAGGAAAACATGAGTTCATGGCCTGGCTGCTaGAGAGGTTCGACCTGGAGG +
Preference number: 4 (lower is better)
Translates to: WRRAGFRFDLAEAEENMSSWPGC*RGSTWR
Trigger: CCTCCAGGTCGAACCTCTGCAGCAGCCAGGCCATGA...ACTCATGTTTTCCTCAGCTTCTGCCAGATCAAACCTAAATCCAGCCCTTCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647664.1
CDS-3UTR GCA 90 bp AAGTCCACAGACACAGGTGTTCAGACAGAAGCGCCTGTTAGGAGGGAAGGGATGCATGTTCCAACCAGCTaGAGCACGCACATAACATGC +
Preference number: 4 (lower is better)
Translates to: KSTDTGVQTEAPVRREGMHVPTS*STHITC
Trigger: GCATGTTATGTGCGTGCTGCAGCTGGTTGGAACATG...CATCCCTTCCCTCCTAACAGGCGCTTCTGTCTGAACACCTGTGTCTGTGGACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647664.1
CDS-3UTR CCA 90 bp AAGTCCACAGACACAGGTGTTCAGACAGAAGCGCCTGTTAGGAGGGAAGGGATGTTAGGAGGGAAGGGATaGAGAAGGGCTGGATTTAGG +
Preference number: 4 (lower is better)
Translates to: KSTDTGVQTEAPVRREGMLGGKG*RRAGFR
Trigger: CCTAAATCCAGCCCTTCTCCATCCCTTCCCTCCTAA...CATCCCTTCCCTCCTAACAGGCGCTTCTGTCTGAACACCTGTGTCTGTGGACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647664.1
CDS-3UTR CCA 90 bp AAGTCCACAGACACAGGTGTTCAGACAGAAGCGCCTGTTAGGAGGGAAGGGATGTGGTTAAATGGACCCTaGCCTTCCTGCTGCACAATC +
Preference number: 4 (lower is better)
Translates to: KSTDTGVQTEAPVRREGMWLNGP*PSCCTI
Trigger: GATTGTGCAGCAGGAAGGCCAGGGTCCATTTAACCA...CATCCCTTCCCTCCTAACAGGCGCTTCTGTCTGAACACCTGTGTCTGTGGACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647664.1
CDS-3UTR CCA 90 bp TGGCTCCATGTCTCTACCACCTACAGACACGCATTGACTCATCCACAGATCTGCAGACCACCACCTCTGTaGTTAAATGGACCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: WLHVSTTYRHALTHPQICRPPPL*LNGPWP
Trigger: AGGCCAGGGTCCATTTAACCACAGAGGTGGTGGTCT...GCAGATCTGTGGATGAGTCAATGCGTGTCTGTAGGTGGTAGAGACATGGAGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647664.1
CDS-3UTR CCA 90 bp CCTGCCCTCCCAGTGACATCTAGCCCCATGATGCATTCAACACTGCTTGCCAGCCAGGAGTGTCACAGATaGGGCTCCTTCCTTATTAAT +
Preference number: 4 (lower is better)
Translates to: PALPVTSSPMMHSTLLASQECHR*GSFLIN
Trigger: ATTAATAAGGAAGGAGCCCCATCTGTGACACTCCTG...GCTGGCAAGCAGTGTTGAATGCATCATGGGGCTAGATGTCACTGGGAGGGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647664.1
CDS-3UTR TCA 90 bp AAGTATGGCAGGAGTGTCACAGATGGGGCTCCTTCCTTATTAATGTCTCCCAACAGCAGTAGTTGGCTTTaGCCCCAGAGTAGAGCTGCC +
Preference number: 4 (lower is better)
Translates to: KYGRSVTDGAPSLLMSPNSSSWL*PQSRAA
Trigger: GGCAGCTCTACTCTGGGGTCAAAGCCAACTACTGCT...GTTGGGAGACATTAATAAGGAAGGAGCCCCATCTGTGACACTCCTGCCATACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647664.1
CDS-3UTR TCA 90 bp TACAGACACGCATTGACTCATCCACAGATCTGCCTGACTTCCCAGAGGAGCTTCTCGACTCTTTCAAAGTaGAGATCAAGGTGCGCCAGG +
Preference number: 4 (lower is better)
Translates to: YRHALTHPQICLTSQRSFSTLSK*RSRCAR
Trigger: CCTGGCGCACCTTGATCTTCACTTTGAAAGAGTCGA...GAAGCTCCTCTGGGAAGTCAGGCAGATCTGTGGATGAGTCAATGCGTGTCTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647664.1
CDS-3UTR TCA 90 bp AAGTATGGCAGGAGTGTCACAGATGGGGCTCCTTCCTTATTAATGTCTCCCAACATCCACAGATCTGCCTaGCTTCCCAGAGGAGCTTCC +
Preference number: 4 (lower is better)
Translates to: KYGRSVTDGAPSLLMSPNIHRSA*LPRGAS
Trigger: GGAAGCTCCTCTGGGAAGTCAGGCAGATCTGTGGAT...GTTGGGAGACATTAATAAGGAAGGAGCCCCATCTGTGACACTCCTGCCATACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647664.1
CDS-3UTR GCA 90 bp ACAGATGGGGCTCCTTCCTTATTAATGTCTCCCAACCTCACCCAACCCAGGAGACAAGTTCGTAGGTCCTaGCCAGACTTGCTCTACTTC +
Preference number: 4 (lower is better)
Translates to: TDGAPSLLMSPNLTQPRRQVRRS*PDLLYF
Trigger: GAAGTAGAGCAAGTCTGGGCAGGACCTACGAACTTG...TCTCCTGGGTTGGGTGAGGTTGGGAGACATTAATAAGGAAGGAGCCCCATCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647664.1
CDS-3UTR CCA 90 bp AGTCCGCTGTCTGTTTCCTCATACGGAACAGTGAGACTTGAAGGCCCGCAGGGTGGGGAATGTTTGTTTTaGCTGTTTGCTGCCTCCATT +
Preference number: 4 (lower is better)
Translates to: SPLSVSSYGTVRLEGPQGGECLF*LFAASI
Trigger: AATGGAGGCAGCAAACAGCCAAAACAAACATTCCCC...ACCCTGCGGGCCTTCAAGTCTCACTGTTCCGTATGAGGAAACAGACAGCGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369889.5
ENST00000448841.7
CDS-3UTR CCA 90 bp AGTCCGCTGTCTGTTTCCTCATACGGAACAGTGAGACTTGAAGGCCCGCAGGGTTTCACGTGGAGAGAATaGCTGCCACTCAAAGTATCT +
Preference number: 4 (lower is better)
Translates to: SPLSVSSYGTVRLEGPQGFTWRE*LPLKVS
Trigger: AGATACTTTGAGTGGCAGCCATTCTCTCCACGTGAA...ACCCTGCGGGCCTTCAAGTCTCACTGTTCCGTATGAGGAAACAGACAGCGGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369889.5
ENST00000448841.7
CDS-3UTR CCA 90 bp AAGTATGGCAGGAGTGTCACAGATGGGGCTCCTTCCTTATTAATGTCTCCCAACTTCCTCATCATGGCCTaGCTGCTGCAGAGGTTCGAC +
Preference number: 4 (lower is better)
Translates to: KYGRSVTDGAPSLLMSPNFLIMA*LLQRFD
Trigger: GTCGAACCTCTGCAGCAGCCAGGCCATGATGAGGAA...GTTGGGAGACATTAATAAGGAAGGAGCCCCATCTGTGACACTCCTGCCATACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647664.1
CDS-3UTR CCA 90 bp TTAATGTCTCCCAACCTCACCCAACCCAGGAGAAATTCCGGAGTGACTCTATCAAGCTCTTCCTCATCATaGCCTGGCTGCTGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: LMSPNLTQPRRNSGVTLSSSSSS*PGCCRG
Trigger: ACCTCTGCAGCAGCCAGGCCATGATGAGGAAGAGCT...TGATAGAGTCACTCCGGAATTTCTCCTGGGTTGGGTGAGGTTGGGAGACATTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647664.1
CDS-3UTR TCA 90 bp AGTCCGCTGTCTGTTTCCTCATACGGAACAGTGAGACTTGAAGGCCCGCAGGGTAGTTTGGCAAAAACCTaGAATAAAATGGCAGCGCTG +
Preference number: 4 (lower is better)
Translates to: SPLSVSSYGTVRLEGPQGSLAKT*NKMAAL
Trigger: CAGCGCTGCCATTTTATTTCAGGTTTTTGCCAAACT...ACCCTGCGGGCCTTCAAGTCTCACTGTTCCGTATGAGGAAACAGACAGCGGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369889.5
ENST00000448841.7
CDS-3UTR GCA 90 bp AAGTATGGCAGGAGTGTCACAGATGGGGCTCCTTCCTTATTAATGTCTCCCAACAGCACGCACATAACATaGGCTGCAGCTCCAAACGCA +
Preference number: 4 (lower is better)
Translates to: KYGRSVTDGAPSLLMSPNSTHIT*AAAPNA
Trigger: TGCGTTTGGAGCTGCAGCGCATGTTATGTGCGTGCT...GTTGGGAGACATTAATAAGGAAGGAGCCCCATCTGTGACACTCCTGCCATACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647664.1
CDS-3UTR GCA 90 bp TGGCTCCATGTCTCTACCACCTACAGACACGCATTGACTCATCCACAGATCTGCTCTTCTCTAAGCCCTTaGTTCTCCTGGGCTTACACA +
Preference number: 4 (lower is better)
Translates to: WLHVSTTYRHALTHPQICSSLSP*FSWAYT
Trigger: TGTGTAAGCCCAGGAGAAGCAAGGGCTTAGAGAAGA...GCAGATCTGTGGATGAGTCAATGCGTGTCTGTAGGTGGTAGAGACATGGAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647664.1
3UTR CAA 72 bp TGCCCAGACTTGCTCTACTTCCAAGTGGAAGGAGCCTaGTTATCTCTAGTCAGGGACAGAAGTATGGCAGGA +
Preference number: 4 (lower is better)
Translates to: CPDLLYFQVEGA*LSLVRDRSMAG
Trigger: TCCTGCCATACTTCTGTCCCTGACTAGAGATAACAAGGCTCCTTCCACTTGGAAGTAGAGCAAGTCTGGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647664.1
CDS-3UTR CCA 90 bp TGGAGAAGGGCTGGATTTAGGTTTGATCTGGCAGAAGCTGAGGAAAACATGAGTCAGAGACATGTGGTCTaGGATGAAAGGCTGGGAGCT +
Preference number: 4 (lower is better)
Translates to: WRRAGFRFDLAEAEENMSQRHVV*DERLGA
Trigger: AGCTCCCAGCCTTTCATCCCAGACCACATGTCTCTG...ACTCATGTTTTCCTCAGCTTCTGCCAGATCAAACCTAAATCCAGCCCTTCTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647664.1
CDS-3UTR CCA 90 bp TGGCTCCATGTCTCTACCACCTACAGACACGCATTGACTCATCCACAGATCTGCACTGACTCAAGGAGTTaGGATCGAAAAGTGAGGAAC +
Preference number: 4 (lower is better)
Translates to: WLHVSTTYRHALTHPQICTDSRS*DRKVRN
Trigger: GTTCCTCACTTTTCGATCCCAACTCCTTGAGTCAGT...GCAGATCTGTGGATGAGTCAATGCGTGTCTGTAGGTGGTAGAGACATGGAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647664.1
CDS-3UTR TCA 90 bp TTAATGTCTCCCAACCTCACCCAACCCAGGAGAAATTCCGGAGTGACTCTATCAAAGCTGAGGAAAACATaGGTGAGTGGGAATGAGGGA +
Preference number: 4 (lower is better)
Translates to: LMSPNLTQPRRNSGVTLSKLRKT*VSGNEG
Trigger: TCCCTCATTCCCACTCACTCATGTTTTCCTCAGCTT...TGATAGAGTCACTCCGGAATTTCTCCTGGGTTGGGTGAGGTTGGGAGACATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647664.1
CDS-3UTR TCA 90 bp TGGAGAAGGGCTGGATTTAGGTTTGATCTGGCAGAAGCTGAGGAAAACATGAGTGCTCTACGAGGAGATTaGCCAGAATGTGGGTTTCAG +
Preference number: 4 (lower is better)
Translates to: WRRAGFRFDLAEAEENMSALRGD*PECGFQ
Trigger: CTGAAACCCACATTCTGGTCAATCTCCTCGTAGAGC...ACTCATGTTTTCCTCAGCTTCTGCCAGATCAAACCTAAATCCAGCCCTTCTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647664.1
CDS-3UTR GCA 90 bp AGTCCGCTGTCTGTTTCCTCATACGGAACAGTGAGACTTGAAGGCCCGCAGGGTTTTGTTTTGGCTGTTTaGTGCCTCCATTCAGATTTT +
Preference number: 4 (lower is better)
Translates to: SPLSVSSYGTVRLEGPQGFVLAV*CLHSDF
Trigger: AAAATCTGAATGGAGGCAGCAAACAGCCAAAACAAA...ACCCTGCGGGCCTTCAAGTCTCACTGTTCCGTATGAGGAAACAGACAGCGGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369889.5
ENST00000448841.7
CDS-3UTR GCA 90 bp AGTCCGCTGTCTGTTTCCTCATACGGAACAGTGAGACTTGAAGGCCCGCAGGGTTTTGTGGAATCTAAATaGAGACACTCGTTTACCTCA +
Preference number: 4 (lower is better)
Translates to: SPLSVSSYGTVRLEGPQGFVESK*RHSFTS
Trigger: TGAGGTAAACGAGTGTCTGCATTTAGATTCCACAAA...ACCCTGCGGGCCTTCAAGTCTCACTGTTCCGTATGAGGAAACAGACAGCGGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369889.5
ENST00000448841.7
CDS-3UTR GCA 90 bp TGGCTCCATGTCTCTACCACCTACAGACACGCATTGACTCATCCACAGATCTGCCTGAGATTGTGCCACTaGACTCCAGCTGAAATAAAA +
Preference number: 4 (lower is better)
Translates to: WLHVSTTYRHALTHPQICLRLCH*TPAEIK
Trigger: TTTTATTTCAGCTGGAGTGCAGTGGCACAATCTCAG...GCAGATCTGTGGATGAGTCAATGCGTGTCTGTAGGTGGTAGAGACATGGAGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647664.1
CDS-3UTR GCA 90 bp TGGAGAAGGGCTGGATTTAGGTTTGATCTGGCAGAAGCTGAGGAAAACATGAGTAGGTGTGTTGGTGGGTaGTTGTTAATCCCAGCTACT +
Preference number: 4 (lower is better)
Translates to: WRRAGFRFDLAEAEENMSRCVGG*LLIPAT
Trigger: AGTAGCTGGGATTAACAAGCACCCACCAACACACCT...ACTCATGTTTTCCTCAGCTTCTGCCAGATCAAACCTAAATCCAGCCCTTCTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647664.1
CDS-3UTR CCA 90 bp TGGAGAAGGGCTGGATTTAGGTTTGATCTGGCAGAAGCTGAGGAAAACATGAGTACCTCCAACCTACTCTaGTCTTCAGGTGAAGAAGAA +
Preference number: 4 (lower is better)
Translates to: WRRAGFRFDLAEAEENMSTSNLL*SSGEEE
Trigger: TTCTTCTTCACCTGAAGACCAGAGTAGGTTGGAGGT...ACTCATGTTTTCCTCAGCTTCTGCCAGATCAAACCTAAATCCAGCCCTTCTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647664.1
CDS-3UTR CAA 90 bp AACCGTCTCCTCCTGCTGGAGGCCACCATCCGAGAGGTGCTTCGCCTCAGGCCCTGCATTCAACACTGCTaGCCAGCCCACCTGGCTCCC +
Preference number: 5 (lower is better)
Translates to: NRLLLLEATIREVLRLRPCIQHC*PAHLAP
Trigger: GGGAGCCAGGTGGGCTGGCAAGCAGTGTTGAATGCA...GGGCCTGAGGCGAAGCACCTCTCGGATGGTGGCCTCCAGCAGGAGGAGACGGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647664.1
CDS-3UTR CAA 90 bp CTCCTCCTGCTGGAGGCCACCATCCGAGAGGTGCTTCGCCTCAGGCCCGTGGCCAGCTCTACGAGGAGATaGACCAGAATGTGGGTTTCA +
Preference number: 5 (lower is better)
Translates to: LLLLEATIREVLRLRPVASSTRR*TRMWVS
Trigger: TGAAACCCACATTCTGGTCAATCTCCTCGTAGAGCT...GGCCACGGGCCTGAGGCGAAGCACCTCTCGGATGGTGGCCTCCAGCAGGAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647664.1
CDS-3UTR CAA 90 bp AACCGTCTCCTCCTGCTGGAGGCCACCATCCGAGAGGTGCTTCGCCTCAGGCCCAGGTCCTGCCCAGACTaGCTCTACTTCCAAGTGGAA +
Preference number: 5 (lower is better)
Translates to: NRLLLLEATIREVLRLRPRSCPD*LYFQVE
Trigger: TTCCACTTGGAAGTAGAGCAAGTCTGGGCAGGACCT...GGGCCTGAGGCGAAGCACCTCTCGGATGGTGGCCTCCAGCAGGAGGAGACGGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647664.1
CDS-3UTR CAA 90 bp AGTCCGCTGTCTGTTTCCTCATACGGAACAGTGAGACTTGAAGGCCCGCAGGGTCCGCAGGGTGTGTGCTaGCGATGCAGGCTGACACGG +
Preference number: 5 (lower is better)
Translates to: SPLSVSSYGTVRLEGPQGPQGVC*RCRLTR
Trigger: CCGTGTCAGCCTGCATCGCAAGCACACACCCTGCGG...ACCCTGCGGGCCTTCAAGTCTCACTGTTCCGTATGAGGAAACAGACAGCGGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369889.5
ENST00000448841.7
CDS-3UTR CAA 90 bp AGTCCGCTGTCTGTTTCCTCATACGGAACAGTGAGACTTGAAGGCCCGCAGGGTCCAGGCGTCTTCTCTTaGCTGTCGGGTGCGCCGTGT +
Preference number: 5 (lower is better)
Translates to: SPLSVSSYGTVRLEGPQGPGVFS*LSGAPC
Trigger: ACACGGCGCACCCGACAGCAAAGAGAAGACGCCTGG...ACCCTGCGGGCCTTCAAGTCTCACTGTTCCGTATGAGGAAACAGACAGCGGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369889.5
ENST00000448841.7
CDS-3UTR CAA 90 bp AGTCCGCTGTCTGTTTCCTCATACGGAACAGTGAGACTTGAAGGCCCGCAGGGTTCCATCCCTGGGGCTTaGGTGGCTGCTCGGTCAACT +
Preference number: 5 (lower is better)
Translates to: SPLSVSSYGTVRLEGPQGSIPGA*VAARST
Trigger: AGTTGACCGAGCAGCCACCAAAGCCCCAGGGATGGA...ACCCTGCGGGCCTTCAAGTCTCACTGTTCCGTATGAGGAAACAGACAGCGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369889.5
ENST00000448841.7
CDS-3UTR CAA 90 bp AGTCCGCTGTCTGTTTCCTCATACGGAACAGTGAGACTTGAAGGCCCGCAGGGTTGGCCACACGCCAGCTaGCTTGTGCCTGTTGGACTC +
Preference number: 5 (lower is better)
Translates to: SPLSVSSYGTVRLEGPQGWPHAS*LVPVGL
Trigger: GAGTCCAACAGGCACAAGCAAGCTGGCGTGTGGCCA...ACCCTGCGGGCCTTCAAGTCTCACTGTTCCGTATGAGGAAACAGACAGCGGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369889.5
ENST00000448841.7
CDS-3UTR CAA 90 bp AGTCCGCTGTCTGTTTCCTCATACGGAACAGTGAGACTTGAAGGCCCGCAGGGTGCCCAGCTCCGCAGGTaGCATTTCCGTCTTCTCGTG +
Preference number: 5 (lower is better)
Translates to: SPLSVSSYGTVRLEGPQGAQLRR*HFRLLV
Trigger: CACGAGAAGACGGAAATGCAACCTGCGGAGCTGGGC...ACCCTGCGGGCCTTCAAGTCTCACTGTTCCGTATGAGGAAACAGACAGCGGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369889.5
ENST00000448841.7
CDS-3UTR CAA 90 bp GCGCTGCAGCTCCAAACGCACACCCACATACACTGCCAGACACCAAAGTCCACAAGACAGGAGAATCACTaGAACCCGGGAGGCGGAGAT +
Preference number: 5 (lower is better)
Translates to: ALQLQTHTHIHCQTPKSTRQENH*NPGGGD
Trigger: ATCTCCGCCTCCCGGGTTCAAGTGATTCTCCTGTCT...TGTGGACTTTGGTGTCTGGCAGTGTATGTGGGTGTGCGTTTGGAGCTGCAGCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647664.1
CDS-3UTR CAA 90 bp TCCCCCACAAGGCCAACGTTGACTCCAGGTGTGCCTGCCCTCCCAGTGACATCTACCTACAGACACGCATaGACTCATCCACAGATCTGC +
Preference number: 5 (lower is better)
Translates to: SPTRPTLTPGVPALPVTSTYRHA*THPQIC
Trigger: GCAGATCTGTGGATGAGTCAATGCGTGTCTGTAGGT...AGATGTCACTGGGAGGGCAGGCACACCTGGAGTCAACGTTGGCCTTGTGGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647664.1
CDS-3UTR CAA 90 bp TACAGACACGCATTGACTCATCCACAGATCTGCCTGACTTCCCAGAGGAGCTTCCCCACAAGGCCAACGTaGACTCCAGGTGTGCCTGCC +
Preference number: 5 (lower is better)
Translates to: YRHALTHPQICLTSQRSFPTRPT*TPGVPA
Trigger: GGCAGGCACACCTGGAGTCAACGTTGGCCTTGTGGG...GAAGCTCCTCTGGGAAGTCAGGCAGATCTGTGGATGAGTCAATGCGTGTCTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647664.1
CDS-3UTR CAA 90 bp AGTCCGCTGTCTGTTTCCTCATACGGAACAGTGAGACTTGAAGGCCCGCAGGGTTCATGGTGGCCCCGGTaGCACACACACACTTCAATG +
Preference number: 5 (lower is better)
Translates to: SPLSVSSYGTVRLEGPQGSWWPR*HTHTSM
Trigger: CATTGAAGTGTGTGTGTGCAACCGGGGCCACCATGA...ACCCTGCGGGCCTTCAAGTCTCACTGTTCCGTATGAGGAAACAGACAGCGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369889.5
ENST00000448841.7
CDS-3UTR CAA 90 bp AGTCCGCTGTCTGTTTCCTCATACGGAACAGTGAGACTTGAAGGCCCGCAGGGTCCGGGTGGGGAATGTTaGTTTTGGCTGTTTGCTGCC +
Preference number: 5 (lower is better)
Translates to: SPLSVSSYGTVRLEGPQGPGGEC*FWLFAA
Trigger: GGCAGCAAACAGCCAAAACAAACATTCCCCACCCGG...ACCCTGCGGGCCTTCAAGTCTCACTGTTCCGTATGAGGAAACAGACAGCGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369889.5
ENST00000448841.7
CDS TCA 90 bp TCACTCCTAAGGGCTGGACACATAGCAGAGTCAGCGCTTGATGTTTaGTTGAATGGGGAAGGAGAGGTGGAGACCACGCCCTCCTCCCTT +
Preference number: 5 (lower is better)
Translates to: SLLRAGHIAESALDV*LNGEGEVETTPSSL
Trigger: AAGGGAGGAGGGCGTGGTCTCCACCTCTCCTTCCCCATTCAATCAAACATCAAGCGCTGACTCTGCTATGTGTCCAGCCCTTAGGAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369884.4
CDS-3UTR CAA 90 bp ATGCTCATCCCCCACAAGGCCAACGTTGACTCCAGGTGTGCCTGCCCTCCCAGTTTCTCGATGTCACAGTaGGATTCTTCTCTAAGCCCT +
Preference number: 5 (lower is better)
Translates to: MLIPHKANVDSRCACPPSFSMSQ*DSSLSP
Trigger: AGGGCTTAGAGAAGAATCCAACTGTGACATCGAGAA...ACTGGGAGGGCAGGCACACCTGGAGTCAACGTTGGCCTTGTGGGGGATGAGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647664.1
CDS-3UTR CAA 90 bp TGGCTCCATGTCTCTACCACCTACAGACACGCATTGACTCATCCACAGATCTGCAGGCAGGAGAATCACTaGAACCAAGGCGGCGGAGGT +
Preference number: 5 (lower is better)
Translates to: WLHVSTTYRHALTHPQICRQENH*NQGGGG
Trigger: ACCTCCGCCGCCTTGGTTCAAGTGATTCTCCTGCCT...GCAGATCTGTGGATGAGTCAATGCGTGTCTGTAGGTGGTAGAGACATGGAGCCA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647664.1
CDS GCA 90 bp AAGTTAAGGTCTTGGAATGAGCATTGCCCCTGGTGGGCCTGTGTGTaGGGTGGTCCTGGTTCACCGGCCTTCTTTAGCAAAGCAGACAAA +
Preference number: 5 (lower is better)
Translates to: KLRSWNEHCPWWACV*GGPGSPAFFSKADK
Trigger: TTTGTCTGCTTTGCTAAAGAAGGCCGGTGAACCAGGACCACCGCACACACAGGCCCACCAGGGGCAATGCTCATTCCAAGACCTTAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369889.5
CDS CCA 90 bp TTCTGTGTCCCCATCTTGCCTTCCATTCTGGCTGAAGGTCAGGGGTaGAGTAGGAACTTCCAGAGACAGAAAGCTAAGATCCGCCTCCAG +
Preference number: 5 (lower is better)
Translates to: FCVPILPSILAEGQG*SRNFQRQKAKIRLQ
Trigger: CTGGAGGCGGATCTTAGCTTTCTGTCTCTGGAAGTTCCTACTCCACCCCTGACCTTCAGCCAGAATGGAAGGCAAGATGGGGACACAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369884.4
CDS-3UTR CAA 90 bp AGTCCGCTGTCTGTTTCCTCATACGGAACAGTGAGACTTGAAGGCCCGCAGGGTACAGGAAAACAGGGCTaGAGGCACACACACAACAGA +
Preference number: 5 (lower is better)
Translates to: SPLSVSSYGTVRLEGPQGTGKQG*RHTHNR
Trigger: TCTGTTGTGTGTGTGCCTCAAGCCCTGTTTTCCTGT...ACCCTGCGGGCCTTCAAGTCTCACTGTTCCGTATGAGGAAACAGACAGCGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369889.5
ENST00000448841.7
CDS-3UTR CAA 90 bp TGGCTCCATGTCTCTACCACCTACAGACACGCATTGACTCATCCACAGATCTGCGCGTCAGTAAGCTATTaGCCCTTCGGAGCAGGACCT +
Preference number: 5 (lower is better)
Translates to: WLHVSTTYRHALTHPQICASVSY*PFGAGP
Trigger: AGGTCCTGCTCCGAAGGGCAAATAGCTTACTGACGC...GCAGATCTGTGGATGAGTCAATGCGTGTCTGTAGGTGGTAGAGACATGGAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647664.1
CDS-3UTR CAA 90 bp ACAGATGGGGCTCCTTCCTTATTAATGTCTCCCAACCTCACCCAACCCAGGAGAGCTGAGATCATGCCATaGCACTCCAGCCTGGGCATT +
Preference number: 5 (lower is better)
Translates to: TDGAPSLLMSPNLTQPRRAEIMP*HSSLGI
Trigger: AATGCCCAGGCTGGAGTGCAATGGCATGATCTCAGC...TCTCCTGGGTTGGGTGAGGTTGGGAGACATTAATAAGGAAGGAGCCCCATCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647664.1
CDS-3UTR CAA 90 bp CCTAAAGTCAGTCAACCATCAACTACTAAAAATCATCCTGCCGGCCGGGCACGGAGGCAGGAGACTCACTaGAACCCGAGAAGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: PKVSQPSTTKNHPAGRARRQETH*NPRSRG
Trigger: ACCTCTGCTTCTCGGGTTCAAGTGAGTCTCCTGCCT...CCGTGCCCGGCCGGCAGGATGATTTTTAGTAGTTGATGGTTGACTGACTTTAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647664.1
CDS-3UTR CAA 90 bp AGTCCGCTGTCTGTTTCCTCATACGGAACAGTGAGACTTGAAGGCCCGCAGGGTAGTGTGTTGAACTCTTaGAGGTCATCGTCATGGTGG +
Preference number: 5 (lower is better)
Translates to: SPLSVSSYGTVRLEGPQGSVLNS*RSSSWW
Trigger: CCACCATGACGATGACCTCAAAGAGTTCAACACACT...ACCCTGCGGGCCTTCAAGTCTCACTGTTCCGTATGAGGAAACAGACAGCGGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369889.5
ENST00000448841.7
CDS-3UTR CAA 90 bp AGTCCGCTGTCTGTTTCCTCATACGGAACAGTGAGACTTGAAGGCCCGCAGGGTTGGGGAATGTTTGTTTaGGCTGTTTGCTGCCTCCAT +
Preference number: 5 (lower is better)
Translates to: SPLSVSSYGTVRLEGPQGWGMFV*AVCCLH
Trigger: ATGGAGGCAGCAAACAGCCAAAACAAACATTCCCCA...ACCCTGCGGGCCTTCAAGTCTCACTGTTCCGTATGAGGAAACAGACAGCGGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369889.5
ENST00000448841.7
CDS-3UTR CAA 90 bp AGTCCGCTGTCTGTTTCCTCATACGGAACAGTGAGACTTGAAGGCCCGCAGGGTTCGTCCACACTAACGTaGGAACAAAGGGCTCTTAAA +
Preference number: 5 (lower is better)
Translates to: SPLSVSSYGTVRLEGPQGSSTLT*EQRALK
Trigger: TTTAAGAGCCCTTTGTTCCAACGTTAGTGTGGACGA...ACCCTGCGGGCCTTCAAGTCTCACTGTTCCGTATGAGGAAACAGACAGCGGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369889.5
CDS-3UTR CAA 90 bp AGTCCGCTGTCTGTTTCCTCATACGGAACAGTGAGACTTGAAGGCCCGCAGGGTTCATCGATGAGTGTGTaGAACTCTTTGAGGTCATCG +
Preference number: 5 (lower is better)
Translates to: SPLSVSSYGTVRLEGPQGSSMSV*NSLRSS
Trigger: CGATGACCTCAAAGAGTTCAACACACTCATCGATGA...ACCCTGCGGGCCTTCAAGTCTCACTGTTCCGTATGAGGAAACAGACAGCGGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369889.5
ENST00000448841.7
CDS-3UTR CAA 90 bp TGGCTCCATGTCTCTACCACCTACAGACACGCATTGACTCATCCACAGATCTGCACTTTCATCACCTGCTaGGGGAGGATGAAGTGGGAA +
Preference number: 5 (lower is better)
Translates to: WLHVSTTYRHALTHPQICTFITC*GRMKWE
Trigger: TTCCCACTTCATCCTCCCCAAGCAGGTGATGAAAGT...GCAGATCTGTGGATGAGTCAATGCGTGTCTGTAGGTGGTAGAGACATGGAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647664.1
CDS-3UTR CAA 90 bp CCTAAAGTCAGTCAACCATCAACTACTAAAAATCATCCTGCCGGCCGGGCACGGCAAGTGGAAGGAGCCTaGTTATCTCTAGTCAGGGAC +
Preference number: 5 (lower is better)
Translates to: PKVSQPSTTKNHPAGRARQVEGA*LSLVRD
Trigger: GTCCCTGACTAGAGATAACAAGGCTCCTTCCACTTG...CCGTGCCCGGCCGGCAGGATGATTTTTAGTAGTTGATGGTTGACTGACTTTAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647664.1
CDS-3UTR CAA 90 bp CCTAAAGTCAGTCAACCATCAACTACTAAAAATCATCCTGCCGGCCGGGCACGGAGGTGGGCAGATCAATaGAGGTCAGGAGTTCGAGAT +
Preference number: 5 (lower is better)
Translates to: PKVSQPSTTKNHPAGRARRWADQ*RSGVRD
Trigger: ATCTCGAACTCCTGACCTCAATTGATCTGCCCACCT...CCGTGCCCGGCCGGCAGGATGATTTTTAGTAGTTGATGGTTGACTGACTTTAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647664.1
CDS-3UTR CAA 90 bp AGTCCGCTGTCTGTTTCCTCATACGGAACAGTGAGACTTGAAGGCCCGCAGGGTATCATCGTTCAAGAGTaGGGGGAAGAAAGACTTCAT +
Preference number: 5 (lower is better)
Translates to: SPLSVSSYGTVRLEGPQGIIVQE*GEERLH
Trigger: ATGAAGTCTTTCTTCCCCCAACTCTTGAACGATGAT...ACCCTGCGGGCCTTCAAGTCTCACTGTTCCGTATGAGGAAACAGACAGCGGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369889.5
ENST00000448841.7
CDS CAA 72 bp CCTGTGAAGCGGCGATGTCTCCCAGGCGTCTTCTCTTaGCTGTCGGGTGCGCCGTGTTCAGAGCTGTCATCT +
Preference number: 6 (lower is better)
Translates to: PVKRRCLPGVFS*LSGAPCSELSS
Trigger: AGATGACAGCTCTGAACACGGCGCACCCGACAGCAAAGAGAAGACGCCTGGGAGACATCGCCGCTTCACAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369889.5
ENST00000448841.7
CDS TCA 72 bp CAGGAGAGACTCTGGCAGCCAAGCAGTAGTTGGCTTTaGCCCCAGAGTAGAGCTGCCCCATCTTCTGGAAGC +
Preference number: 6 (lower is better)
Translates to: QERLWQPSSSWL*PQSRAAPSSGS
Trigger: GCTTCCAGAAGATGGGGCAGCTCTACTCTGGGGTCAAAGCCAACTACTGCTTGGCTGCCAGAGTCTCTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369884.4
CDS GCA 72 bp TCTTGGAATGAGCATTGCCCCTGGTGGGCCTGTGTGTaGGGTGGTCCTGGTTCACCGGCCTTCTTTAGCAAA +
Preference number: 6 (lower is better)
Translates to: SWNEHCPWWACV*GGPGSPAFFSK
Trigger: TTTGCTAAAGAAGGCCGGTGAACCAGGACCACCGCACACACAGGCCCACCAGGGGCAATGCTCATTCCAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369889.5
CDS TCA 72 bp AGGGCTGGACACATAGCAGAGTCAGCGCTTGATGTTTaGTTGAATGGGGAAGGAGAGGTGGAGACCACGCCC +
Preference number: 6 (lower is better)
Translates to: RAGHIAESALDV*LNGEGEVETTP
Trigger: GGGCGTGGTCTCCACCTCTCCTTCCCCATTCAATCAAACATCAAGCGCTGACTCTGCTATGTGTCCAGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369884.4
CDS TCA 72 bp GTGAGAAGCAGGCTTAGCGGGGTTAAGGAGCTTGTCTaGGCCTTCAGGCTCATGTCTCTCTCACTCCTAAGG +
Preference number: 6 (lower is better)
Translates to: VRSRLSGVKELV*AFRLMSLSLLR
Trigger: CCTTAGGAGTGAGAGAGACATGAGCCTGAAGGCTCAGACAAGCTCCTTAACCCCGCTAAGCCTGCTTCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369884.4
CDS TCA 72 bp ACTCCTAAGGGCTGGACACATAGCAGAGTCAGCGCTTaGTGTTTGATTGAATGGGGAAGGAGAGGTGGAGAC +
Preference number: 6 (lower is better)
Translates to: TPKGWTHSRVSA*CLIEWGRRGGD
Trigger: GTCTCCACCTCTCCTTCCCCATTCAATCAAACATCAAGCGCTGACTCTGCTATGTGTCCAGCCCTTAGGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369884.4
CDS CCA 72 bp CCCATCTTGCCTTCCATTCTGGCTGAAGGTCAGGGGTaGAGTAGGAACTTCCAGAGACAGAAAGCTAAGATC +
Preference number: 6 (lower is better)
Translates to: PILPSILAEGQG*SRNFQRQKAKI
Trigger: GATCTTAGCTTTCTGTCTCTGGAAGTTCCTACTCCACCCCTGACCTTCAGCCAGAATGGAAGGCAAGATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369884.4