Pregenerated sensors for WBP1 (Homo sapiens)
Ensembl gene IDs: ENSG00000239779Ensembl transcript IDs: ENST00000393972.7, ENST00000428943.1, ENST00000464774.6, ENST00000466303.1, ENST00000466835.5, ENST00000473467.5, ENST00000474185.5, ENST00000484744.5, ENST00000490120.1, ENST00000492047.1, ENST00000494741.5
Found 43 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GGAGAGCCACCGCAAGCTTCCACTGCAGCCATGGGATGGGTTCTATaGGGCTACAGGCAAAGTCAGCTGCATCTGCTGTTGCGGCGCCCG | + |
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Preference number: 5 (lower is better) Translates to: GEPPQASTAAMGWVL*GYRQSQLHLLLRRP Trigger: CGGGCGCCGCAACAGCAGATGCAGCTGACTTTGCCTGTAGCCTCATAGAACCCATCCCATGGCTGCAGTGGAAGCTTGCGGTGGCTCTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000428943.1 ENST00000474185.5 |
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| CDS GCA 90 bp | GATGGCATCCAGGGCGCGAGTCTGGGTTCCAGCTCTTCTCCAAATTaGTCCCTCAAGAGAAGACGCTGCCGGACTCTGCTGTTGCGGCGC | + |
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Preference number: 5 (lower is better) Translates to: DGIQGASLGSSSSPN*SLKRRRCRTLLLRR Trigger: GCGCCGCAACAGCAGAGTCCGGCAGCGTCTTCTCTTGAGGGAGCAATTTGGAGAAGAGCTGGAACCCAGACTCGCGCCCTGGATGCCATC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393972.7 |
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| CDS CCA 90 bp | AAGACAGAGGGAGCCTCCCTGGGACCTCACTATGCCTCTGGTCACTaGAGAGCCACCGCAAGCTTCCACTGCAGCCATGGGATGGGTTCT | + |
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Preference number: 5 (lower is better) Translates to: KTEGASLGPHYASGH*RATASFHCSHGMGS Trigger: AGAACCCATCCCATGGCTGCAGTGGAAGCTTGCGGTGGCTCTCCAGTGACCAGAGGCATAGTGAGGTCCCAGGGAGGCTCCCTCTGTCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000428943.1 ENST00000466303.1 ENST00000484744.5 |
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| CDS CCA 90 bp | AGCTCTCGAAGCCAGAGCAGTGCTCCCAACCAGATGGGATTGCTGTaGATGATAAAGGATGGCATCCAGGGCGCGAGTCTGGGTTCCAGC | + |
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Preference number: 5 (lower is better) Translates to: SSRSQSSAPNQMGLL*MIKDGIQGASLGSS Trigger: GCTGGAACCCAGACTCGCGCCCTGGATGCCATCCTTTATCATCCACAGCAATCCCATCTGGTTGGGAGCACTGCTCTGGCTTCGAGAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000428943.1 ENST00000466303.1 |
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| CDS CCA 90 bp | CAGTGTGAGACCCAGAGCAGTGCTCCCAACCAGATGGGATTGCTGTaGATGATAAAGGATGGCATCCAGGGCGCGAGTCTGGGTTCCAGC | + |
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Preference number: 5 (lower is better) Translates to: QCETQSSAPNQMGLL*MIKDGIQGASLGSS Trigger: GCTGGAACCCAGACTCGCGCCCTGGATGCCATCCTTTATCATCCACAGCAATCCCATCTGGTTGGGAGCACTGCTCTGGGTCTCACACTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484744.5 |
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| CDS TCA 90 bp | TGTGAGACGATTTGGGGTTCTGGTTTGGGGAGGGCCACTGGTAGCTaGCCCAGGGCATCAAGTCACTCACGAAGGTCAAGCAGTGAACCG | + |
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Preference number: 5 (lower is better) Translates to: CETIWGSGLGRATGS*PRASSHSRRSSSEP Trigger: CGGTTCACTGCTTGACCTTCGTGAGTGACTTGATGCCCTGGGTCAGCTACCAGTGGCCCTCCCCAAACCAGAACCCCAAATCGTCTCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000473467.5 |
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| CDS GCA 90 bp | CCTCACTATGCCTCTGGTCACTGGAGAGCCACCGCAAGCTTCCACTaGAGCCATGGGATGGGTTCTATGAGGCTACAGGCAAAGTCAGCT | + |
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Preference number: 5 (lower is better) Translates to: PHYASGHWRATASFH*SHGMGSMRLQAKSA Trigger: AGCTGACTTTGCCTGTAGCCTCATAGAACCCATCCCATGGCTGCAGTGGAAGCTTGCGGTGGCTCTCCAGTGACCAGAGGCATAGTGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000428943.1 ENST00000466303.1 ENST00000484744.5 |
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| CDS GCA 90 bp | ATCAGTTATGCCTCTGGTCACTGGAGAGCCACCGCAAGCTTCCACTaGAGCCATGGGATGGGTTCTATGAGGCTACAGGCAAAGTCAGCT | + |
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Preference number: 5 (lower is better) Translates to: ISYASGHWRATASFH*SHGMGSMRLQAKSA Trigger: AGCTGACTTTGCCTGTAGCCTCATAGAACCCATCCCATGGCTGCAGTGGAAGCTTGCGGTGGCTCTCCAGTGACCAGAGGCATAACTGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000474185.5 |
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| CDS CCA 90 bp | GGCACAGCTCTCGAAGCAGATGGGATTGCTGTGGATGATAAAGGATaGCATCCAGGGCGCGAGTCTGGGTTCCAGCTCTTCTCCAAATTG | + |
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Preference number: 5 (lower is better) Translates to: GTALEADGIAVDDKG*HPGRESGFQLFSKL Trigger: CAATTTGGAGAAGAGCTGGAACCCAGACTCGCGCCCTGGATGCCATCCTTTATCATCCACAGCAATCCCATCTGCTTCGAGAGCTGTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393972.7 |
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| CDS CCA 90 bp | GAGCAGTGCTCCCAACCAGATGGGATTGCTGTGGATGATAAAGGATaGCATCCAGGGCGCGAGTCTGGGTTCCAGCTCTTCTCCAAATTG | + |
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Preference number: 5 (lower is better) Translates to: EQCSQPDGIAVDDKG*HPGRESGFQLFSKL Trigger: CAATTTGGAGAAGAGCTGGAACCCAGACTCGCGCCCTGGATGCCATCCTTTATCATCCACAGCAATCCCATCTGGTTGGGAGCACTGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000428943.1 ENST00000466303.1 ENST00000484744.5 |
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| CDS CCA 90 bp | GAAATGTGTGGAAAAGGGAATGTGAGACGATTTGGGGTTCTGGTTTaGGGAGGGCCACTGGTAGCTGACCCAGGGCATCAAGTCACTCAC | + |
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Preference number: 5 (lower is better) Translates to: EMCGKGNVRRFGVLV*GGPLVADPGHQVTH Trigger: GTGAGTGACTTGATGCCCTGGGTCAGCTACCAGTGGCCCTCCCCAAACCAGAACCCCAAATCGTCTCACATTCCCTTTTCCACACATTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000473467.5 |
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| CDS CCA 90 bp | GCTGAGAGGAGTGTTGAAATATCTGAAGGGCAGATGGGATTGCTGTaGATGATAAAGGATGGCATCCAGGGCGCGAGTCTGGGTTCCAGC | + |
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Preference number: 5 (lower is better) Translates to: AERSVEISEGQMGLL*MIKDGIQGASLGSS Trigger: GCTGGAACCCAGACTCGCGCCCTGGATGCCATCCTTTATCATCCACAGCAATCCCATCTGCCCTTCAGATATTTCAACACTCCTCTCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492047.1 |
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| CDS CCA 90 bp | GGAAGAGGATTTGGAATAGCAAGAATCAGTTATGCCTCTGGTCACTaGAGAGCCACCGCAAGCTTCCACTGCAGCCATGGGATGGGTTCT | + |
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Preference number: 5 (lower is better) Translates to: GRGFGIARISYASGH*RATASFHCSHGMGS Trigger: AGAACCCATCCCATGGCTGCAGTGGAAGCTTGCGGTGGCTCTCCAGTGACCAGAGGCATAACTGATTCTTGCTATTCCAAATCCTCTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000474185.5 |
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| CDS CCA 90 bp | GAGGATGCTGAGAGGAGTGTTGAAATATCTGAAGGGCTGTCAACGTaGAAGAGGATTTGGAATAGCAAGAATCAGTCTGCTGTTGCGGCG | + |
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Preference number: 5 (lower is better) Translates to: EDAERSVEISEGLST*KRIWNSKNQSAVAA Trigger: CGCCGCAACAGCAGACTGATTCTTGCTATTCCAAATCCTCTTCCACGTTGACAGCCCTTCAGATATTTCAACACTCCTCTCAGCATCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000466835.5 ENST00000494741.5 |
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| CDS TCA 90 bp | TGCTTTCTGTTAAGGGAGTGTTTTGGCAGAAGCCAGAAGACAGTCTaGGATAATCTCAGTCTCAGACAACGGGTAGCGGTAGGTCATTTC | + |
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Preference number: 5 (lower is better) Translates to: CFLLRECFGRSQKTV*DNLSLRQRVAVGHF Trigger: GAAATGACCTACCGCTACCCGTTGTCTGAGACTGAGATTATCTCAGACTGTCTTCTGGCTTCTGCCAAAACACTCCCTTAACAGAAAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000484744.5 ENST00000490120.1 |
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| CDS GCA 90 bp | CTGCAGCCATGGGATGGGTTCTATGAGGCTACAGGCAAAGTCAGCTaGATCTACGTTACAAAGTTTAGACAAAGAGTGGAAGAGACATGT | + |
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Preference number: 5 (lower is better) Translates to: LQPWDGFYEATGKVS*IYVTKFRQRVEETC Trigger: ACATGTCTCTTCCACTCTTTGTCTAAACTTTGTAACGTAGATGCAGCTGACTTTGCCTGTAGCCTCATAGAACCCATCCCATGGCTGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000466303.1 ENST00000484744.5 |
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| CDS CCA 90 bp | AGGAGTGTTGAAATATCTGAAGGGCTGTCAACGTGGAAGAGGATTTaGAATAGCAAGAATCAGTTATGCCTCTGGTCACTGGAGAGCCAC | + |
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Preference number: 5 (lower is better) Translates to: RSVEISEGLSTWKRI*NSKNQLCLWSLESH Trigger: GTGGCTCTCCAGTGACCAGAGGCATAACTGATTCTTGCTATTCCAAATCCTCTTCCACGTTGACAGCCCTTCAGATATTTCAACACTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000474185.5 |
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| CDS CCA 90 bp | GAGGATGCTGAGAGGAGTGTTGAAATATCTGAAGGGCTGTCAACGTaGAAGAGGATTTGGAATAGCAAGAATCAGTCTAGAGAACAAGAC | + |
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Preference number: 5 (lower is better) Translates to: EDAERSVEISEGLST*KRIWNSKNQSREQD Trigger: GTCTTGTTCTCTAGACTGATTCTTGCTATTCCAAATCCTCTTCCACGTTGACAGCCCTTCAGATATTTCAACACTCCTCTCAGCATCCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000484744.5 ENST00000490120.1 |
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| CDS CCA 90 bp | AGGAGTGTTGAAATATCTGAAGGGCTGTCAACGTGGAAGAGGATTTaGAATAGCAAGAATCAGTCTAGAGAACAAGACAAAAGTGTGGAC | + |
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Preference number: 5 (lower is better) Translates to: RSVEISEGLSTWKRI*NSKNQSREQDKSVD Trigger: GTCCACACTTTTGTCTTGTTCTCTAGACTGATTCTTGCTATTCCAAATCCTCTTCCACGTTGACAGCCCTTCAGATATTTCAACACTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000484744.5 ENST00000490120.1 |
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| CDS CCA 90 bp | GGATTTGGAATAGCAAGAATCAGTCTAGAGAACAAGACAAAAGTGTaGACATACAAAGAGGGAGATTTCAGCTCTGCATATATGAGACTT | + |
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Preference number: 5 (lower is better) Translates to: GFGIARISLENKTKV*TYKEGDFSSAYMRL Trigger: AAGTCTCATATATGCAGAGCTGAAATCTCCCTCTTTGTATGTCCACACTTTTGTCTTGTTCTCTAGACTGATTCTTGCTATTCCAAATCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000484744.5 ENST00000490120.1 |
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| CDS CAA 90 bp | GGATGGCATCCAGGGCGCGAGTCTGGGTTCCAGCTCTTCTCCAAATaGCTCCCTCAAGAGAAGACGCTGCCGGACTCTGCTGTTGCGGCG | + |
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Preference number: 6 (lower is better) Translates to: GWHPGRESGFQLFSK*LPQEKTLPDSAVAA Trigger: CGCCGCAACAGCAGAGTCCGGCAGCGTCTTCTCTTGAGGGAGCAATTTGGAGAAGAGCTGGAACCCAGACTCGCGCCCTGGATGCCATCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393972.7 |
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| CDS GCA 72 bp | GCCTCTGGTCACTGGAGAGCCACCGCAAGCTTCCACTaGAGCCATGGGATGGGTTCTATGAGGCTACAGGCA | + |
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Preference number: 6 (lower is better) Translates to: ASGHWRATASFH*SHGMGSMRLQA Trigger: TGCCTGTAGCCTCATAGAACCCATCCCATGGCTGCAGTGGAAGCTTGCGGTGGCTCTCCAGTGACCAGAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000428943.1 ENST00000466303.1 ENST00000474185.5 ENST00000484744.5 |
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| CDS GCA 72 bp | TTGCAAGACAGAGGGAGCCTCCCTGGGACCTCACTATaGCTCTGGTCACTGGAGAGCCACCGCAAGCTTCCA | + |
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Preference number: 6 (lower is better) Translates to: LQDRGSLPGTSL*LWSLESHRKLP Trigger: TGGAAGCTTGCGGTGGCTCTCCAGTGACCAGAGGCATAGTGAGGTCCCAGGGAGGCTCCCTCTGTCTTGCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000428943.1 ENST00000466303.1 ENST00000484744.5 ENST00000492047.1 |
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| CDS CAA 72 bp | CCAGGGCGCGAGTCTGGGTTCCAGCTCTTCTCCAAATaGCTCCCTCAAGAGAAGACGCTGCCGGACTCTGCT | + |
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Preference number: 6 (lower is better) Translates to: PGRESGFQLFSK*LPQEKTLPDSA Trigger: AGCAGAGTCCGGCAGCGTCTTCTCTTGAGGGAGCAATTTGGAGAAGAGCTGGAACCCAGACTCGCGCCCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393972.7 |
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| CDS CAA 90 bp | GAGGGGCAGTGTGAGACCCAGAGCAGTGCTCCCAACCAGATGGGATaGCTGTGGATGATAAAGGATGGCATCCAGGGCGCGAGTCTGGGT | + |
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Preference number: 6 (lower is better) Translates to: EGQCETQSSAPNQMG*LWMIKDGIQGASLG Trigger: ACCCAGACTCGCGCCCTGGATGCCATCCTTTATCATCCACAGCAATCCCATCTGGTTGGGAGCACTGCTCTGGGTCTCACACTGCCCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484744.5 |
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| CDS CAA 72 bp | CCAGGGCGCGAGTCTGGGTTCCAGCTCTTCTCCAAATaGCTCCCTCAAGAGAAGACGCTGCCGGACTCTGTT | + |
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Preference number: 6 (lower is better) Translates to: PGRESGFQLFSK*LPQEKTLPDSV Trigger: AACAGAGTCCGGCAGCGTCTTCTCTTGAGGGAGCAATTTGGAGAAGAGCTGGAACCCAGACTCGCGCCCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000428943.1 ENST00000466303.1 ENST00000484744.5 ENST00000492047.1 |
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| CDS TCA 72 bp | CTCCTGGGCACAGCTCTCGAAGACAATCCCACCCTGTaGACCAAGTTCAGCTTGGAGAGATGGGGGAAGTGG | + |
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Preference number: 6 (lower is better) Translates to: LLGTALEDNPTL*TKFSLERWGKW Trigger: CCACTTCCCCCATCTCTCCAAGCTGAACTTGGTTCACAGGGTGGGATTGTCTTCGAGAGCTGTGCCCAGGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000464774.6 ENST00000474185.5 ENST00000484744.5 ENST00000492047.1 |
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| CDS TCA 72 bp | ATTTGGGGTTCTGGTTTGGGGAGGGCCACTGGTAGCTaGCCCAGGGCATCAAGTCACTCACGAAGGTCAAGC | + |
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Preference number: 6 (lower is better) Translates to: IWGSGLGRATGS*PRASSHSRRSS Trigger: GCTTGACCTTCGTGAGTGACTTGATGCCCTGGGTCAGCTACCAGTGGCCCTCCCCAAACCAGAACCCCAAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000473467.5 |
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| CDS CAA 90 bp | GGATGGCATCCAGGGCGCGAGTCTGGGTTCCAGCTCTTCTCCAAATaGCTCCCTCAAGAGAAGACGCTGCCGGACTCTGTTGTGACAATA | + |
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Preference number: 6 (lower is better) Translates to: GWHPGRESGFQLFSK*LPQEKTLPDSVVTI Trigger: TATTGTCACAACAGAGTCCGGCAGCGTCTTCTCTTGAGGGAGCAATTTGGAGAAGAGCTGGAACCCAGACTCGCGCCCTGGATGCCATCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000428943.1 ENST00000466303.1 ENST00000484744.5 ENST00000492047.1 |
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| CDS TCA 72 bp | CCGCAAGCTTCCACTGCAGCCATGGGATGGGTTCTATaGGGCTACAGGCAAAGTCAGCTGCATCTGCTGTTG | + |
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Preference number: 6 (lower is better) Translates to: PQASTAAMGWVL*GYRQSQLHLLL Trigger: CAACAGCAGATGCAGCTGACTTTGCCTGTAGCCTCATAGAACCCATCCCATGGCTGCAGTGGAAGCTTGCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000428943.1 ENST00000474185.5 |
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| CDS TCA 72 bp | CCGCAAGCTTCCACTGCAGCCATGGGATGGGTTCTATaGGGCTACAGGCAAAGTCAGCTGCATCTACGTTAC | + |
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Preference number: 6 (lower is better) Translates to: PQASTAAMGWVL*GYRQSQLHLRY Trigger: GTAACGTAGATGCAGCTGACTTTGCCTGTAGCCTCATAGAACCCATCCCATGGCTGCAGTGGAAGCTTGCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000466303.1 ENST00000484744.5 |
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| CDS CCA 72 bp | AAGGGGAAAGAGACAAATGGCTGTCGTGATAGGTTTTaGAGCTATTGGGATACCTGCTGTTGCGGCGCCCGA | + |
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Preference number: 6 (lower is better) Translates to: KGKETNGCRDRF*SYWDTCCCGAR Trigger: TCGGGCGCCGCAACAGCAGGTATCCCAATAGCTCCAAAACCTATCACGACAGCCATTTGTCTCTTTCCCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000466303.1 ENST00000484744.5 |
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| CDS CAA 90 bp | GAGGATGCTGAGAGGAGTGTTGAAATATCTGAAGGGCAGATGGGATaGCTGTGGATGATAAAGGATGGCATCCAGGGCGCGAGTCTGGGT | + |
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Preference number: 6 (lower is better) Translates to: EDAERSVEISEGQMG*LWMIKDGIQGASLG Trigger: ACCCAGACTCGCGCCCTGGATGCCATCCTTTATCATCCACAGCAATCCCATCTGCCCTTCAGATATTTCAACACTCCTCTCAGCATCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492047.1 |
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| CDS CAA 72 bp | GAGAGGAGTGTTGAAATATCTGAAGGGCAGATGGGATaGCTGTGGATGATAAAGGATGGCATCCAGGGCGCG | + |
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Preference number: 6 (lower is better) Translates to: ERSVEISEGQMG*LWMIKDGIQGA Trigger: CGCGCCCTGGATGCCATCCTTTATCATCCACAGCAATCCCATCTGCCCTTCAGATATTTCAACACTCCTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492047.1 |
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| CDS GCA 72 bp | ACGTGGAAGAGGATTTGGAATAGCAAGAATCAGTTATaGCTCTGGTCACTGGAGAGCCACCGCAAGCTTCCA | + |
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Preference number: 6 (lower is better) Translates to: TWKRIWNSKNQL*LWSLESHRKLP Trigger: TGGAAGCTTGCGGTGGCTCTCCAGTGACCAGAGGCATAACTGATTCTTGCTATTCCAAATCCTCTTCCACGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000474185.5 |
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| CDS CCA 72 bp | GAAATATCTGAAGGGCTGTCAACGTGGAAGAGGATTTaGAATAGCAAGAATCAGTCTGCTGTTGCGGCGCCC | + |
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Preference number: 6 (lower is better) Translates to: EISEGLSTWKRI*NSKNQSAVAAP Trigger: GGGCGCCGCAACAGCAGACTGATTCTTGCTATTCCAAATCCTCTTCCACGTTGACAGCCCTTCAGATATTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000466835.5 ENST00000494741.5 |
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| CDS CCA 72 bp | AAGAGGATTTGGAATAGCAAGAATCAGTTATGCCTCTaGTCACTGGAGAGCCACCGCAAGCTTCCACTGCAG | + |
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Preference number: 6 (lower is better) Translates to: KRIWNSKNQLCL*SLESHRKLPLQ Trigger: CTGCAGTGGAAGCTTGCGGTGGCTCTCCAGTGACCAGAGGCATAACTGATTCTTGCTATTCCAAATCCTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000474185.5 |
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| CDS TCA 72 bp | TTAAGGGAGTGTTTTGGCAGAAGCCAGAAGACAGTCTaGGATAATCTCAGTCTCAGACAACGGGTAGCGGTA | + |
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Preference number: 6 (lower is better) Translates to: LRECFGRSQKTV*DNLSLRQRVAV Trigger: TACCGCTACCCGTTGTCTGAGACTGAGATTATCTCAGACTGTCTTCTGGCTTCTGCCAAAACACTCCCTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000484744.5 ENST00000490120.1 |
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| CDS GCA 72 bp | TGGGATGGGTTCTATGAGGCTACAGGCAAAGTCAGCTaGATCTACGTTACAAAGTTTAGACAAAGAGTGGAA | + |
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Preference number: 6 (lower is better) Translates to: WDGFYEATGKVS*IYVTKFRQRVE Trigger: TTCCACTCTTTGTCTAAACTTTGTAACGTAGATGCAGCTGACTTTGCCTGTAGCCTCATAGAACCCATCCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000466303.1 ENST00000484744.5 |
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| CDS CCA 72 bp | GAAATATCTGAAGGGCTGTCAACGTGGAAGAGGATTTaGAATAGCAAGAATCAGTTATGCCTCTGGTCACTG | + |
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Preference number: 6 (lower is better) Translates to: EISEGLSTWKRI*NSKNQLCLWSL Trigger: CAGTGACCAGAGGCATAACTGATTCTTGCTATTCCAAATCCTCTTCCACGTTGACAGCCCTTCAGATATTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000474185.5 |
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| CDS GCA 72 bp | AAAAGTGTGGACATACAAAGAGGGAGATTTCAGCTCTaGATATATGAGACTTCCTTCACACTCAAGCCTCAC | + |
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Preference number: 6 (lower is better) Translates to: KSVDIQRGRFQL*IYETSFTLKPH Trigger: GTGAGGCTTGAGTGTGAAGGAAGTCTCATATATGCAGAGCTGAAATCTCCCTCTTTGTATGTCCACACTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000484744.5 ENST00000490120.1 |
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| CDS CCA 72 bp | GAAATATCTGAAGGGCTGTCAACGTGGAAGAGGATTTaGAATAGCAAGAATCAGTCTAGAGAACAAGACAAA | + |
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Preference number: 6 (lower is better) Translates to: EISEGLSTWKRI*NSKNQSREQDK Trigger: TTTGTCTTGTTCTCTAGACTGATTCTTGCTATTCCAAATCCTCTTCCACGTTGACAGCCCTTCAGATATTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000484744.5 ENST00000490120.1 |
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| CDS CCA 72 bp | ATAGCAAGAATCAGTCTAGAGAACAAGACAAAAGTGTaGACATACAAAGAGGGAGATTTCAGCTCTGCATAT | + |
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Preference number: 6 (lower is better) Translates to: IARISLENKTKV*TYKEGDFSSAY Trigger: ATATGCAGAGCTGAAATCTCCCTCTTTGTATGTCCACACTTTTGTCTTGTTCTCTAGACTGATTCTTGCTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000484744.5 ENST00000490120.1 |
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