RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for WARS2 (Homo sapiens)

Ensembl gene IDs: ENSG00000116874

Ensembl transcript IDs: ENST00000235521.5, ENST00000369426.9, ENST00000495746.5, ENST00000497402.1, ENST00000497761.1

Found 283 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTGCGGCGCACCACTTCCTCCACGGAGAGCCCCGTCACCGCGGCATaGACCGCCACTATGTTGGACACGCCAGCGCGGCCAGCCGGGTCA +
Preference number: 1 (lower is better)
Translates to: LRRTTSSTESPVTAA*TATMLDTPARPAGS
Trigger: TGACCCGGCTGGCCGCGCTGGCGTGTCCAACATAGTGGCGGTGCATGCCGCGGTGACGGGGCTCTCCGTGGAGGAAGTGGTGCGCCGCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369426.9
3UTR GCA 90 bp CATCTGCCACGGCCAGCTTGTAGCGAGCAGTGTTCATGCCCGCGCTaGGGCGCACCACTTCCTCCACGGAGAGCCCCGTCACCGCGGCAT +
Preference number: 1 (lower is better)
Translates to: HLPRPACSEQCSCPR*GAPLPPRRAPSPRH
Trigger: ATGCCGCGGTGACGGGGCTCTCCGTGGAGGAAGTGGTGCGCCGCAGCGCGGGCATGAACACTGCTCGCTACAAGCTGGCCGTGGCAGATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369426.9
3UTR GCA 90 bp CAATCACAGCATCTGCCACGGCCAGCTTGTAGCGAGCAGTGTTCATaGCCGCGCTGCGGCGCACCACTTCCTCCACGGAGAGCCCCGTCA +
Preference number: 1 (lower is better)
Translates to: QSQHLPRPACSEQCS*PRCGAPLPPRRAPS
Trigger: TGACGGGGCTCTCCGTGGAGGAAGTGGTGCGCCGCAGCGCGGGCATGAACACTGCTCGCTACAAGCTGGCCGTGGCAGATGCTGTGATTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369426.9
3UTR CCA 90 bp GGAATTTCTGCACTATCTCCTCTGGGCTGTCTGTTATTCGGACGGTaGCCAGTTTGTCAGGGTCTGATTTCGACATTTTGGCAGAAGGAT +
Preference number: 1 (lower is better)
Translates to: GISALSPLGCLLFGR*PVCQGLISTFWQKD
Trigger: ATCCTTCTGCCAAAATGTCGAAATCAGACCCTGACAAACTGGCCACCGTCCGAATAACAGACAGCCCAGAGGAGATAGTGCAGAAATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369426.9
3UTR GCA 90 bp CTTCACTGCTATTGTAGACTGGCAGAACCTATTTCAAAGTATTTCTaGAATGAGCGTAGAGGAGAGAACTTGGGACCCGCCTTGGGGATT +
Preference number: 1 (lower is better)
Translates to: LHCYCRLAEPISKYF*NERRGENLGPALGI
Trigger: AATCCCCAAGGCGGGTCCCAAGTTCTCTCCTCTACGCTCATTGCAGAAATACTTTGAAATAGGTTCTGCCAGTCTACAATAGCAGTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
3UTR GCA 90 bp AAGCTGCCGTTATCAGAATGCATGGAGTGCAAGGCACAAAAGCCTTaGTGTGATTCGTTGAAACTTCCTATAGAAAACCCACCAATTTCT +
Preference number: 1 (lower is better)
Translates to: KLPLSECMECKAQKP*CDSLKLPIENPPIS
Trigger: AGAAATTGGTGGGTTTTCTATAGGAAGTTTCAACGAATCACAGCAAGGCTTTTGTGCCTTGCACTCCATGCATTCTGATAACGGCAGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369426.9
3UTR TCA 90 bp AATGGAAGTGCAGAAAAGCTAGGTTTCAGGGTGACATTACTTAACTaGGGTAGAGGCAAGATGAGAAGCTGTCAGTCATTGGGAATATCT +
Preference number: 1 (lower is better)
Translates to: NGSAEKLGFRVTLLN*GRGKMRSCQSLGIS
Trigger: AGATATTCCCAATGACTGACAGCTTCTCATCTTGCCTCTACCTCAGTTAAGTAATGTCACCCTGAAACCTAGCTTTTCTGCACTTCCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
3UTR GCA 90 bp CAAATTACTCCTTACTTCAATCACATTTCTGCAGGCCAAGGAGTGTaGCTCAATAATTGGGGATTCAGACAGCTATGCCTTCTTGATTTA +
Preference number: 1 (lower is better)
Translates to: QITPYFNHISAGQGV*LNNWGFRQLCLLDL
Trigger: TAAATCAAGAAGGCATAGCTGTCTGAATCCCCAATTATTGAGGCACACTCCTTGGCCTGCAGAAATGTGATTGAAGTAAGGAGTAATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
3UTR CCA 90 bp TCATTGGGAATATCTGATTTGTCAGTCTTCACTGCTATTGTAGACTaGCAGAACCTATTTCAAAGTATTTCTGCAATGAGCGTAGAGGAG +
Preference number: 1 (lower is better)
Translates to: SLGISDLSVFTAIVD*QNLFQSISAMSVEE
Trigger: CTCCTCTACGCTCATTGCAGAAATACTTTGAAATAGGTTCTGCCAGTCTACAATAGCAGTGAAGACTGACAAATCAGATATTCCCAATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
3UTR CCA 90 bp TTCGTTGAAACTTCCTATAGAAAACCCACCAATTTCTTCACCTCCTaGCACACAGTGTATGCTAATTCTTTGGCTTTTGCTGATCCAATT +
Preference number: 1 (lower is better)
Translates to: FVETSYRKPTNFFTS*HTVYANSLAFADPI
Trigger: AATTGGATCAGCAAAAGCCAAAGAATTAGCATACACTGTGTGCCAGGAGGTGAAGAAATTGGTGGGTTTTCTATAGGAAGTTTCAACGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369426.9
3UTR-3UTR CCA 90 bp GCCCGCGCTGCGGCGCACCACTTCCTCCACGGAGAGCCCCGTCACCGCGGCATGCTGTTATTCGGACGGTaGCCAGTTTGTCAGGGTCTG +
Preference number: 2 (lower is better)
Translates to: ARAAAHHFLHGEPRHRGMLLFGR*PVCQGL
Trigger: CAGACCCTGACAAACTGGCCACCGTCCGAATAACAG...CATGCCGCGGTGACGGGGCTCTCCGTGGAGGAAGTGGTGCGCCGCAGCGCGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369426.9
3UTR-3UTR GCA 90 bp ATTTCAAAGTATTTCTGCAATGAGCGTAGAGGAGAGAACTTGGGACCCGCCTTGAGCGAGCAGTGTTCATaGCCGCGCTGCGGCGCACCA +
Preference number: 2 (lower is better)
Translates to: ISKYFCNERRGENLGPALSEQCS*PRCGAP
Trigger: TGGTGCGCCGCAGCGCGGGCATGAACACTGCTCGCT...CAAGGCGGGTCCCAAGTTCTCTCCTCTACGCTCATTGCAGAAATACTTTGAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369426.9
3UTR-3UTR GCA 90 bp ATTTCAAAGTATTTCTGCAATGAGCGTAGAGGAGAGAACTTGGGACCCGCCTTGTGTTCATGCCCGCGCTaGGGCGCACCACTTCCTCCA +
Preference number: 2 (lower is better)
Translates to: ISKYFCNERRGENLGPALCSCPR*GAPLPP
Trigger: TGGAGGAAGTGGTGCGCCGCAGCGCGGGCATGAACA...CAAGGCGGGTCCCAAGTTCTCTCCTCTACGCTCATTGCAGAAATACTTTGAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369426.9
3UTR-3UTR GCA 90 bp AGTATTTCTGCAATGAGCGTAGAGGAGAGAACTTGGGACCCGCCTTGGGGATTTCTCAATCACAGCATCTaGCACGGCCAGCTTGTAGCG +
Preference number: 2 (lower is better)
Translates to: SISAMSVEERTWDPPWGFLNHSI*HGQLVA
Trigger: CGCTACAAGCTGGCCGTGGCAGATGCTGTGATTGAG...AAATCCCCAAGGCGGGTCCCAAGTTCTCTCCTCTACGCTCATTGCAGAAATACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369426.9
3UTR-3UTR TCA 90 bp TGCAATGAGCGTAGAGGAGAGAACTTGGGACCCGCCTTGGGGATTTTGATGGGGCAGGCACCGTCTCAGTaGCAAACAAACTATAAGAAT +
Preference number: 2 (lower is better)
Translates to: CNERRGENLGPALGILMGQAPSQ*QTNYKN
Trigger: ATTCTTATAGTTTGTTTGTCACTGAGACGGTGCCTG...CCCCATCAAAATCCCCAAGGCGGGTCCCAAGTTCTCTCCTCTACGCTCATTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
3UTR-3UTR CCA 90 bp AGTATTTCTGCAATGAGCGTAGAGGAGAGAACTTGGGACCCGCCTTGGGGATTTCTGCACTATCTCCTCTaGGCTGTCTGTTATTCGGAC +
Preference number: 2 (lower is better)
Translates to: SISAMSVEERTWDPPWGFLHYLL*AVCYSD
Trigger: GTCCGAATAACAGACAGCCCAGAGGAGATAGTGCAG...AAATCCCCAAGGCGGGTCCCAAGTTCTCTCCTCTACGCTCATTGCAGAAATACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369426.9
3UTR-3UTR CCA 90 bp TGCAATGAGCGTAGAGGAGAGAACTTGGGACCCGCCTTGGGGATTTTGATGGGGATCGTACAAGCTAATTaGATTCTCTCAGCCTCACTT +
Preference number: 2 (lower is better)
Translates to: CNERRGENLGPALGILMGIVQAN*ILSASL
Trigger: AAGTGAGGCTGAGAGAATCCAATTAGCTTGTACGAT...CCCCATCAAAATCCCCAAGGCGGGTCCCAAGTTCTCTCCTCTACGCTCATTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
3UTR-3UTR CCA 90 bp ATTTCAAAGTATTTCTGCAATGAGCGTAGAGGAGAGAACTTGGGACCCGCCTTGGTAGAGGAGAGAACTTaGGACCCGCCTTGGGGATTT +
Preference number: 2 (lower is better)
Translates to: ISKYFCNERRGENLGPALVEERT*DPPWGF
Trigger: AAATCCCCAAGGCGGGTCCCAAGTTCTCTCCTCTAC...CAAGGCGGGTCCCAAGTTCTCTCCTCTACGCTCATTGCAGAAATACTTTGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
3UTR-3UTR TCA 90 bp AGTATTTCTGCAATGAGCGTAGAGGAGAGAACTTGGGACCCGCCTTGGGGATTTCAGTTTGTCAGGGTCTaGTTTCGACATTTTGGCAGA +
Preference number: 2 (lower is better)
Translates to: SISAMSVEERTWDPPWGFQFVRV*FRHFGR
Trigger: TCTGCCAAAATGTCGAAATCAGACCCTGACAAACTG...AAATCCCCAAGGCGGGTCCCAAGTTCTCTCCTCTACGCTCATTGCAGAAATACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369426.9
3UTR-3UTR GCA 90 bp ATGAGCTCTGAATACAAATTGGCATCTGATCAAATGGCATCTCAAGGATTATACCCCGTCACCGCGGCATaGACCGCCACTATGTTGGAC +
Preference number: 2 (lower is better)
Translates to: MSSEYKLASDQMASQGLYPVTAA*TATMLD
Trigger: GTCCAACATAGTGGCGGTGCATGCCGCGGTGACGGG...GTATAATCCTTGAGATGCCATTTGATCAGATGCCAATTTGTATTCAGAGCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369426.9
3UTR-3UTR CCA 90 bp GTACTGAATAAACAAGCACTATTCTTAAGAATAAGGGGTAAGGGTTTTACTCTCGCACCGCCACTATGTTaGACACGCCAGCGCGGCCAG +
Preference number: 2 (lower is better)
Translates to: VLNKQALFLRIRGKGFTLAPPLC*TRQRGQ
Trigger: CTGGCCGCGCTGGCGTGTCCAACATAGTGGCGGTGC...GAGAGTAAAACCCTTACCCCTTATTCTTAAGAATAGTGCTTGTTTATTCAGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369426.9
3UTR CAA 90 bp TCAGAATGCATGGAGTGCAAGGCACAAAAGCCTTGCTGTGATTCGTaGAAACTTCCTATAGAAAACCCACCAATTTCTTCACCTCCTGGC +
Preference number: 2 (lower is better)
Translates to: SECMECKAQKPCCDS*KLPIENPPISSPPG
Trigger: GCCAGGAGGTGAAGAAATTGGTGGGTTTTCTATAGGAAGTTTCAACGAATCACAGCAAGGCTTTTGTGCCTTGCACTCCATGCATTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369426.9
3UTR-3UTR GCA 90 bp AGTATTTCTGCAATGAGCGTAGAGGAGAGAACTTGGGACCCGCCTTGGGGATTTAAGGCACAAAAGCCTTaGTGTGATTCGTTGAAACTT +
Preference number: 2 (lower is better)
Translates to: SISAMSVEERTWDPPWGFKAQKP*CDSLKL
Trigger: AAGTTTCAACGAATCACAGCAAGGCTTTTGTGCCTT...AAATCCCCAAGGCGGGTCCCAAGTTCTCTCCTCTACGCTCATTGCAGAAATACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
3UTR-3UTR GCA 90 bp GGATGGGGCGTTTTGTGGATTAACATGTGTTCTGACACAAGGACTACTCTACTTTCAGAATGCATGGAGTaGAAGGCACAAAAGCCTTGC +
Preference number: 2 (lower is better)
Translates to: GWGVLWINMCSDTRTTLLSECME*KAQKPC
Trigger: GCAAGGCTTTTGTGCCTTGCACTCCATGCATTCTGA...AAGTAGAGTAGTCCTTGTGTCAGAACACATGTTAATCCACAAAACGCCCCATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
3UTR-3UTR CCA 90 bp CTGGGATGGGGCGTTTTGTGGATTAACATGTGTTCTGACACAAGGACTACTCTAGTGTGCCTCAATAATTaGGGATTCAGACAGCTATGC +
Preference number: 2 (lower is better)
Translates to: LGWGVLWINMCSDTRTTLVCLNN*GFRQLC
Trigger: GCATAGCTGTCTGAATCCCCAATTATTGAGGCACAC...TAGAGTAGTCCTTGTGTCAGAACACATGTTAATCCACAAAACGCCCCATCCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
3UTR-3UTR CCA 90 bp CTGCCGTTATCAGAATGCATGGAGTGCAAGGCACAAAAGCCTTGCTGTGATTCGAATTTCTTCACCTCCTaGCACACAGTGTATGCTAAT +
Preference number: 2 (lower is better)
Translates to: LPLSECMECKAQKPCCDSNFFTS*HTVYAN
Trigger: ATTAGCATACACTGTGTGCCAGGAGGTGAAGAAATT...CGAATCACAGCAAGGCTTTTGTGCCTTGCACTCCATGCATTCTGATAACGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369426.9
3UTR-3UTR TCA 90 bp AGTATTTCTGCAATGAGCGTAGAGGAGAGAACTTGGGACCCGCCTTGGGGATTTTTGGTGAGACTAAACTaGAATGAATGCAAGAAAGCA +
Preference number: 2 (lower is better)
Translates to: SISAMSVEERTWDPPWGFLVRLN*NECKKA
Trigger: TGCTTTCTTGCATTCATTTCAGTTTAGTCTCACCAA...AAATCCCCAAGGCGGGTCCCAAGTTCTCTCCTCTACGCTCATTGCAGAAATACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
3UTR-3UTR GCA 90 bp TTGGGAATATCTGATTTGTCAGTCTTCACTGCTATTGTAGACTGGCAGAACCTATCAGAATGCATGGAGTaGAAGGCACAAAAGCCTTGC +
Preference number: 2 (lower is better)
Translates to: LGISDLSVFTAIVDWQNLSECME*KAQKPC
Trigger: GCAAGGCTTTTGTGCCTTGCACTCCATGCATTCTGA...TAGGTTCTGCCAGTCTACAATAGCAGTGAAGACTGACAAATCAGATATTCCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
3UTR-3UTR CCA 90 bp AGGAAAGCTGCCGTTATCAGAATGCATGGAGTGCAAGGCACAAAAGCCTTGCTGTTTGTTGATGGGATTTaGAACACTGTCGTATTTCAA +
Preference number: 2 (lower is better)
Translates to: RKAAVIRMHGVQGTKALLFVDGI*NTVVFQ
Trigger: TTGAAATACGACAGTGTTCCAAATCCCATCAACAAA...CAGCAAGGCTTTTGTGCCTTGCACTCCATGCATTCTGATAACGGCAGCTTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
3UTR-3UTR CCA 90 bp TCCTATAGAAAACCCACCAATTTCTTCACCTCCTGGCACACAGTGTATGCTAATGTGTGCCTCAATAATTaGGGATTCAGACAGCTATGC +
Preference number: 2 (lower is better)
Translates to: SYRKPTNFFTSWHTVYANVCLNN*GFRQLC
Trigger: GCATAGCTGTCTGAATCCCCAATTATTGAGGCACAC...ATTAGCATACACTGTGTGCCAGGAGGTGAAGAAATTGGTGGGTTTTCTATAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369426.9
3UTR-3UTR TCA 90 bp TCTGATTTGTCAGTCTTCACTGCTATTGTAGACTGGCAGAACCTATTTCAAAGTTTTGATGGGGAAATGTaGCCACGGTTCTGTGAATCC +
Preference number: 2 (lower is better)
Translates to: SDLSVFTAIVDWQNLFQSFDGEM*PRFCES
Trigger: GGATTCACAGAACCGTGGTCACATTTCCCCATCAAA...ACTTTGAAATAGGTTCTGCCAGTCTACAATAGCAGTGAAGACTGACAAATCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
3UTR-3UTR GCA 90 bp TGTTGTTCACAGCATTTTGTTGATGGGATTTGGAACACTGTCGTATTTCAAAGCCTGCCGTTATCAGAATaGATGGAGTGCAAGGCACAA +
Preference number: 2 (lower is better)
Translates to: CCSQHFVDGIWNTVVFQSLPLSE*MECKAQ
Trigger: TTGTGCCTTGCACTCCATGCATTCTGATAACGGCAG...GCTTTGAAATACGACAGTGTTCCAAATCCCATCAACAAAATGCTGTGAACAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
3UTR-3UTR GCA 90 bp AAACATCATCAGTCGTTCCAACACCCACCTTCAAAATCAGAATGTTTAGAGTCTCTTCAATCACATTTCTaGAGGCCAAGGAGTGTGCCT +
Preference number: 2 (lower is better)
Translates to: KHHQSFQHPPSKSECLESLQSHF*RPRSVP
Trigger: AGGCACACTCCTTGGCCTGCAGAAATGTGATTGAAG...AGACTCTAAACATTCTGATTTTGAAGGTGGGTGTTGGAACGACTGATGATGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
3UTR-3UTR GCA 90 bp CTGGGATGGGGCGTTTTGTGGATTAACATGTGTTCTGACACAAGGACTACTCTAGAAGTAGATAACGTGTaGATCTGTTACAGTAAGTAC +
Preference number: 2 (lower is better)
Translates to: LGWGVLWINMCSDTRTTLEVDNV*ICYSKY
Trigger: GTACTTACTGTAACAGATGCACACGTTATCTACTTC...TAGAGTAGTCCTTGTGTCAGAACACATGTTAATCCACAAAACGCCCCATCCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
3UTR-3UTR GCA 90 bp TGGGATGGGGCGTTTTGTGGATTAACATGTGTTCTGACACAAGGACTACTCTACGAAGTAGATAACGTGTaGATCTGTTACAGTAAGTAC +
Preference number: 2 (lower is better)
Translates to: WDGAFCGLTCVLTQGLLYEVDNV*ICYSKY
Trigger: GTACTTACTGTAACAGATGCACACGTTATCTACTTC...GTAGAGTAGTCCTTGTGTCAGAACACATGTTAATCCACAAAACGCCCCATCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
3UTR-3UTR CCA 90 bp TGGGATGGGGCGTTTTGTGGATTAACATGTGTTCTGACACAAGGACTACTCTACACTGCTATTGTAGACTaGCAGAACCTATTTCAAAGT +
Preference number: 2 (lower is better)
Translates to: WDGAFCGLTCVLTQGLLYTAIVD*QNLFQS
Trigger: ACTTTGAAATAGGTTCTGCCAGTCTACAATAGCAGT...GTAGAGTAGTCCTTGTGTCAGAACACATGTTAATCCACAAAACGCCCCATCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
3UTR-3UTR CCA 90 bp CTGGGATGGGGCGTTTTGTGGATTAACATGTGTTCTGACACAAGGACTACTCTAACTGCTATTGTAGACTaGCAGAACCTATTTCAAAGT +
Preference number: 2 (lower is better)
Translates to: LGWGVLWINMCSDTRTTLTAIVD*QNLFQS
Trigger: ACTTTGAAATAGGTTCTGCCAGTCTACAATAGCAGT...TAGAGTAGTCCTTGTGTCAGAACACATGTTAATCCACAAAACGCCCCATCCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
3UTR-3UTR GCA 90 bp GTACTGAATAAACAAGCACTATTCTTAAGAATAAGGGGTAAGGGTTTTACTCTCGCAGGCCAAGGAGTGTaGCTCAATAATTGGGGATTC +
Preference number: 2 (lower is better)
Translates to: VLNKQALFLRIRGKGFTLAGQGV*LNNWGF
Trigger: GAATCCCCAATTATTGAGGCACACTCCTTGGCCTGC...GAGAGTAAAACCCTTACCCCTTATTCTTAAGAATAGTGCTTGTTTATTCAGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
3UTR-3UTR TCA 90 bp TCTTATGGAGTGATATCGTACAAGCTAATTGGATTCTCTCAGCCTCACTTTCCTATACAAATTGGCATCTaGTCAAATGGCATCTCAAGG +
Preference number: 2 (lower is better)
Translates to: SYGVISYKLIGFSQPHFPIQIGI*SNGISR
Trigger: CCTTGAGATGCCATTTGATCAGATGCCAATTTGTAT...AGGAAAGTGAGGCTGAGAGAATCCAATTAGCTTGTACGATATCACTCCATAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
3UTR-3UTR CCA 90 bp TTCTTTTTAGGAAAGCTGCCGTTATCAGAATGCATGGAGTGCAAGGCACAAAAGGCTCTGAATACAAATTaGCATCTGATCAAATGGCAT +
Preference number: 2 (lower is better)
Translates to: FFLGKLPLSECMECKAQKALNTN*HLIKWH
Trigger: ATGCCATTTGATCAGATGCCAATTTGTATTCAGAGC...CTTTTGTGCCTTGCACTCCATGCATTCTGATAACGGCAGCTTTCCTAAAAAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
3UTR-3UTR CCA 90 bp TCTTATGGAGTGATATCGTACAAGCTAATTGGATTCTCTCAGCCTCACTTTCCTAATTTCACGCTTAATTaGGGCAAACTTCTCAATCAC +
Preference number: 2 (lower is better)
Translates to: SYGVISYKLIGFSQPHFPNFTLN*GKLLNH
Trigger: GTGATTGAGAAGTTTGCCCCAATTAAGCGTGAAATT...AGGAAAGTGAGGCTGAGAGAATCCAATTAGCTTGTACGATATCACTCCATAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369426.9
3UTR-3UTR TCA 90 bp AAACATCATCAGTCGTTCCAACACCCACCTTCAAAATCAGAATGTTTAGAGTCTTTGGTGAGACTAAACTaGAATGAATGCAAGAAAGCA +
Preference number: 2 (lower is better)
Translates to: KHHQSFQHPPSKSECLESLVRLN*NECKKA
Trigger: TGCTTTCTTGCATTCATTTCAGTTTAGTCTCACCAA...AGACTCTAAACATTCTGATTTTGAAGGTGGGTGTTGGAACGACTGATGATGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
3UTR-3UTR GCA 90 bp AAACATCATCAGTCGTTCCAACACCCACCTTCAAAATCAGAATGTTTAGAGTCTATTTCAAAGTATTTCTaGAATGAGCGTAGAGGAGAG +
Preference number: 2 (lower is better)
Translates to: KHHQSFQHPPSKSECLESISKYF*NERRGE
Trigger: CTCTCCTCTACGCTCATTGCAGAAATACTTTGAAAT...AGACTCTAAACATTCTGATTTTGAAGGTGGGTGTTGGAACGACTGATGATGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
3UTR-3UTR CCA 90 bp TCTTATGGAGTGATATCGTACAAGCTAATTGGATTCTCTCAGCCTCACTTTCCTTTTGTTGATGGGATTTaGAACACTGTCGTATTTCAA +
Preference number: 2 (lower is better)
Translates to: SYGVISYKLIGFSQPHFPFVDGI*NTVVFQ
Trigger: TTGAAATACGACAGTGTTCCAAATCCCATCAACAAA...AGGAAAGTGAGGCTGAGAGAATCCAATTAGCTTGTACGATATCACTCCATAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
3UTR-3UTR GCA 90 bp TTTATGAGCTCTGAATACAAATTGGCATCTGATCAAATGGCATCTCAAGGATTAAAGGCACAAAAGCCTTaGTGTGATTCGTTGAAACTT +
Preference number: 2 (lower is better)
Translates to: FMSSEYKLASDQMASQGLKAQKP*CDSLKL
Trigger: AAGTTTCAACGAATCACAGCAAGGCTTTTGTGCCTT...TAATCCTTGAGATGCCATTTGATCAGATGCCAATTTGTATTCAGAGCTCATAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
3UTR GCA 72 bp ACCACTTCCTCCACGGAGAGCCCCGTCACCGCGGCATaGACCGCCACTATGTTGGACACGCCAGCGCGGCCA +
Preference number: 3 (lower is better)
Translates to: TTSSTESPVTAA*TATMLDTPARP
Trigger: TGGCCGCGCTGGCGTGTCCAACATAGTGGCGGTGCATGCCGCGGTGACGGGGCTCTCCGTGGAGGAAGTGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369426.9
3UTR GCA 72 bp CGGCCAGCTTGTAGCGAGCAGTGTTCATGCCCGCGCTaGGGCGCACCACTTCCTCCACGGAGAGCCCCGTCA +
Preference number: 3 (lower is better)
Translates to: RPACSEQCSCPR*GAPLPPRRAPS
Trigger: TGACGGGGCTCTCCGTGGAGGAAGTGGTGCGCCGCAGCGCGGGCATGAACACTGCTCGCTACAAGCTGGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369426.9
3UTR GCA 72 bp CATCTGCCACGGCCAGCTTGTAGCGAGCAGTGTTCATaGCCGCGCTGCGGCGCACCACTTCCTCCACGGAGA +
Preference number: 3 (lower is better)
Translates to: HLPRPACSEQCS*PRCGAPLPPRR
Trigger: TCTCCGTGGAGGAAGTGGTGCGCCGCAGCGCGGGCATGAACACTGCTCGCTACAAGCTGGCCGTGGCAGATG
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369426.9
3UTR-3UTR CAA 90 bp GGCGCACCACTTCCTCCACGGAGAGCCCCGTCACCGCGGCATGCACCGCCACTAAAGTCTGTCACAGCCTaGCGGAATTTCTGCACTATC +
Preference number: 3 (lower is better)
Translates to: GAPLPPRRAPSPRHAPPLKSVTA*RNFCTI
Trigger: GATAGTGCAGAAATTCCGCAAGGCTGTGACAGACTT...TAGTGGCGGTGCATGCCGCGGTGACGGGGCTCTCCGTGGAGGAAGTGGTGCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369426.9
3UTR GCA 72 bp ACGCTTAATTGGGGCAAACTTCTCAATCACAGCATCTaGCACGGCCAGCTTGTAGCGAGCAGTGTTCATGCC +
Preference number: 3 (lower is better)
Translates to: TLNWGKLLNHSI*HGQLVASSVHA
Trigger: GGCATGAACACTGCTCGCTACAAGCTGGCCGTGGCAGATGCTGTGATTGAGAAGTTTGCCCCAATTAAGCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369426.9
3UTR CCA 72 bp TGTCACAGCCTTGCGGAATTTCTGCACTATCTCCTCTaGGCTGTCTGTTATTCGGACGGTGGCCAGTTTGTC +
Preference number: 3 (lower is better)
Translates to: CHSLAEFLHYLL*AVCYSDGGQFV
Trigger: GACAAACTGGCCACCGTCCGAATAACAGACAGCCCAGAGGAGATAGTGCAGAAATTCCGCAAGGCTGTGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369426.9
3UTR CCA 72 bp GCACTATCTCCTCTGGGCTGTCTGTTATTCGGACGGTaGCCAGTTTGTCAGGGTCTGATTTCGACATTTTGG +
Preference number: 3 (lower is better)
Translates to: ALSPLGCLLFGR*PVCQGLISTFW
Trigger: CCAAAATGTCGAAATCAGACCCTGACAAACTGGCCACCGTCCGAATAACAGACAGCCCAGAGGAGATAGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369426.9
3UTR-3UTR CAA 90 bp CTGATCCAATTTGTAAAACCTTCTCTAAATGGTCCTTGTCCAGCTTCAGTTTTTTGCACCGCCACTATGTaGGACACGCCAGCGCGGCCA +
Preference number: 3 (lower is better)
Translates to: LIQFVKPSLNGPCPASVFCTATM*DTPARP
Trigger: TGGCCGCGCTGGCGTGTCCAACATAGTGGCGGTGCA...AAAAACTGAAGCTGGACAAGGACCATTTAGAGAAGGTTTTACAAATTGGATCAG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369426.9
3UTR-3UTR CAA 90 bp AGGAAAGCTGCCGTTATCAGAATGCATGGAGTGCAAGGCACAAAAGCCTTGCTGGTTCACAGCATTTTGTaGATGGGATTTGGAACACTG +
Preference number: 3 (lower is better)
Translates to: RKAAVIRMHGVQGTKALLVHSIL*MGFGTL
Trigger: CAGTGTTCCAAATCCCATCAACAAAATGCTGTGAAC...CAGCAAGGCTTTTGTGCCTTGCACTCCATGCATTCTGATAACGGCAGCTTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
3UTR GCA 72 bp CCTTACTTCAATCACATTTCTGCAGGCCAAGGAGTGTaGCTCAATAATTGGGGATTCAGACAGCTATGCCTT +
Preference number: 3 (lower is better)
Translates to: PYFNHISAGQGV*LNNWGFRQLCL
Trigger: AAGGCATAGCTGTCTGAATCCCCAATTATTGAGGCACACTCCTTGGCCTGCAGAAATGTGATTGAAGTAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
3UTR GCA 72 bp TATTGTAGACTGGCAGAACCTATTTCAAAGTATTTCTaGAATGAGCGTAGAGGAGAGAACTTGGGACCCGCC +
Preference number: 3 (lower is better)
Translates to: YCRLAEPISKYF*NERRGENLGPA
Trigger: GGCGGGTCCCAAGTTCTCTCCTCTACGCTCATTGCAGAAATACTTTGAAATAGGTTCTGCCAGTCTACAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
3UTR CCA 72 bp CTTGTCCAGCTTCAGTTTTTCAATTTCACGCTTAATTaGGGCAAACTTCTCAATCACAGCATCTGCCACGGC +
Preference number: 3 (lower is better)
Translates to: LVQLQFFNFTLN*GKLLNHSICHG
Trigger: GCCGTGGCAGATGCTGTGATTGAGAAGTTTGCCCCAATTAAGCGTGAAATTGAAAAACTGAAGCTGGACAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369426.9
3UTR TCA 72 bp AGGCAAGATGAGAAGCTGTCAGTCATTGGGAATATCTaGTTTGTCAGTCTTCACTGCTATTGTAGACTGGCA +
Preference number: 3 (lower is better)
Translates to: RQDEKLSVIGNI*FVSLHCYCRLA
Trigger: TGCCAGTCTACAATAGCAGTGAAGACTGACAAATCAGATATTCCCAATGACTGACAGCTTCTCATCTTGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
3UTR GCA 72 bp TTTTTAGGAAAGCTGCCGTTATCAGAATGCATGGAGTaGAAGGCACAAAAGCCTTGCTGTGATTCGTTGAAA +
Preference number: 3 (lower is better)
Translates to: FLGKLPLSECME*KAQKPCCDSLK
Trigger: TTTCAACGAATCACAGCAAGGCTTTTGTGCCTTGCACTCCATGCATTCTGATAACGGCAGCTTTCCTAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
3UTR-3UTR CAA 90 bp GGATGGGGCGTTTTGTGGATTAACATGTGTTCTGACACAAGGACTACTCTACTTAGCTCTGAATACAAATaGGCATCTGATCAAATGGCA +
Preference number: 3 (lower is better)
Translates to: GWGVLWINMCSDTRTTLLSSEYK*ASDQMA
Trigger: TGCCATTTGATCAGATGCCAATTTGTATTCAGAGCT...AAGTAGAGTAGTCCTTGTGTCAGAACACATGTTAATCCACAAAACGCCCCATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
3UTR-3UTR CAA 90 bp CCAAATTACTCCTTACTTCAATCACATTTCTGCAGGCCAAGGAGTGTGCCTCAAAGTTGGTGTTATCTCTaGGAAAACAAGTTAAGCAGC +
Preference number: 3 (lower is better)
Translates to: PNYSLLQSHFCRPRSVPQSWCYL*ENKLSS
Trigger: GCTGCTTAACTTGTTTTCCAAGAGATAACACCAACT...TTGAGGCACACTCCTTGGCCTGCAGAAATGTGATTGAAGTAAGGAGTAATTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
3UTR-3UTR CAA 90 bp CTGGGATGGGGCGTTTTGTGGATTAACATGTGTTCTGACACAAGGACTACTCTAATGAGCAAAAATGCTTaGCTCAACAACCTAGTTATG +
Preference number: 3 (lower is better)
Translates to: LGWGVLWINMCSDTRTTLMSKNA*LNNLVM
Trigger: CATAACTAGGTTGTTGAGCAAAGCATTTTTGCTCAT...TAGAGTAGTCCTTGTGTCAGAACACATGTTAATCCACAAAACGCCCCATCCCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
3UTR GCA 72 bp TTATCAGAATGCATGGAGTGCAAGGCACAAAAGCCTTaGTGTGATTCGTTGAAACTTCCTATAGAAAACCCA +
Preference number: 3 (lower is better)
Translates to: LSECMECKAQKP*CDSLKLPIENP
Trigger: TGGGTTTTCTATAGGAAGTTTCAACGAATCACAGCAAGGCTTTTGTGCCTTGCACTCCATGCATTCTGATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369426.9
3UTR-3UTR CAA 90 bp TCTTATGGAGTGATATCGTACAAGCTAATTGGATTCTCTCAGCCTCACTTTCCTGTTTTACTCTCAGATTaGCTTCTCTTATGGAGTGAT +
Preference number: 3 (lower is better)
Translates to: SYGVISYKLIGFSQPHFPVLLSD*LLLWSD
Trigger: ATCACTCCATAAGAGAAGCAAATCTGAGAGTAAAAC...AGGAAAGTGAGGCTGAGAGAATCCAATTAGCTTGTACGATATCACTCCATAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
3UTR-3UTR CAA 90 bp TTGGGAATATCTGATTTGTCAGTCTTCACTGCTATTGTAGACTGGCAGAACCTAGTGTATGCTAATTCTTaGGCTTTTGCTGATCCAATT +
Preference number: 3 (lower is better)
Translates to: LGISDLSVFTAIVDWQNLVYANS*AFADPI
Trigger: AATTGGATCAGCAAAAGCCAAAGAATTAGCATACAC...TAGGTTCTGCCAGTCTACAATAGCAGTGAAGACTGACAAATCAGATATTCCCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369426.9
3UTR-3UTR CAA 90 bp ATGAGCTCTGAATACAAATTGGCATCTGATCAAATGGCATCTCAAGGATTATACTTCTCTAAATGGTCCTaGTCCAGCTTCAGTTTTTCA +
Preference number: 3 (lower is better)
Translates to: MSSEYKLASDQMASQGLYFSKWS*SSFSFS
Trigger: TGAAAAACTGAAGCTGGACAAGGACCATTTAGAGAA...GTATAATCCTTGAGATGCCATTTGATCAGATGCCAATTTGTATTCAGAGCTCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369426.9
3UTR CCA 72 bp ATATCTGATTTGTCAGTCTTCACTGCTATTGTAGACTaGCAGAACCTATTTCAAAGTATTTCTGCAATGAGC +
Preference number: 3 (lower is better)
Translates to: ISDLSVFTAIVD*QNLFQSISAMS
Trigger: GCTCATTGCAGAAATACTTTGAAATAGGTTCTGCCAGTCTACAATAGCAGTGAAGACTGACAAATCAGATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
3UTR-3UTR CAA 90 bp GTACTGAATAAACAAGCACTATTCTTAAGAATAAGGGGTAAGGGTTTTACTCTCAGTTGGTGTTATCTCTaGGAAAACAAGTTAAGCAGC +
Preference number: 3 (lower is better)
Translates to: VLNKQALFLRIRGKGFTLSWCYL*ENKLSS
Trigger: GCTGCTTAACTTGTTTTCCAAGAGATAACACCAACT...GAGAGTAAAACCCTTACCCCTTATTCTTAAGAATAGTGCTTGTTTATTCAGTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR CCA 90 bp TGCCCGCGCTGCGGCGCACCACTTCCTCCACGGAGAGCCCCGTCACCGCGGCATGCACCGCCACTATGTTaGACACGCCAGCGCGGCCAG +
Preference number: 4 (lower is better)
Translates to: CPRCGAPLPPRRAPSPRHAPPLC*TRQRGQ
Trigger: CTGGCCGCGCTGGCGTGTCCAACATAGTGGCGGTGC...ATGCCGCGGTGACGGGGCTCTCCGTGGAGGAAGTGGTGCGCCGCAGCGCGGGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369426.9
CDS-3UTR CCA 90 bp GCCCGCGCTGCGGCGCACCACTTCCTCCACGGAGAGCCCCGTCACCGCGGCATGAGGACAGCTGGGTCTTaGGGGACAGTAATGGAGTGG +
Preference number: 4 (lower is better)
Translates to: ARAAAHHFLHGEPRHRGMRTAGS*GTVMEW
Trigger: CCACTCCATTACTGTCCCCCAAGACCCAGCTGTCCT...CATGCCGCGGTGACGGGGCTCTCCGTGGAGGAAGTGGTGCGCCGCAGCGCGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369426.9
CDS-3UTR CCA 90 bp TGCCCGCGCTGCGGCGCACCACTTCCTCCACGGAGAGCCCCGTCACCGCGGCATGTAGAGGAGAGAACTTaGGACCCGCCTTGGGGATTT +
Preference number: 4 (lower is better)
Translates to: CPRCGAPLPPRRAPSPRHVEERT*DPPWGF
Trigger: AAATCCCCAAGGCGGGTCCCAAGTTCTCTCCTCTAC...ATGCCGCGGTGACGGGGCTCTCCGTGGAGGAAGTGGTGCGCCGCAGCGCGGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369426.9
CDS-3UTR TCA 90 bp TGCCCGCGCTGCGGCGCACCACTTCCTCCACGGAGAGCCCCGTCACCGCGGCATCCTTGTGCTAGATCCTaGACTAGTTCCATGTGCTGG +
Preference number: 4 (lower is better)
Translates to: CPRCGAPLPPRRAPSPRHPCARS*TSSMCW
Trigger: CCAGCACATGGAACTAGTTCAGGATCTAGCACAAGG...ATGCCGCGGTGACGGGGCTCTCCGTGGAGGAAGTGGTGCGCCGCAGCGCGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369426.9
CDS-3UTR GCA 90 bp CGTCACCGCGGCATGCACCGCCACTATGTTGGACACGCCAGCGCGGCCAGCCGGCCCACCGTGCCATCGTaGTTCTGCTTGGTAGTCTTT +
Preference number: 4 (lower is better)
Translates to: RHRGMHRHYVGHASAASRPTVPS*FCLVVF
Trigger: AAAGACTACCAAGCAGAAGCACGATGGCACGGTGGG...CCGGCTGGCCGCGCTGGCGTGTCCAACATAGTGGCGGTGCATGCCGCGGTGACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369426.9
CDS-3UTR GCA 90 bp GCCCGCGCTGCGGCGCACCACTTCCTCCACGGAGAGCCCCGTCACCGCGGCATGCTTCAATCACATTTCTaGAGGCCAAGGAGTGTGCCT +
Preference number: 4 (lower is better)
Translates to: ARAAAHHFLHGEPRHRGMLQSHF*RPRSVP
Trigger: AGGCACACTCCTTGGCCTGCAGAAATGTGATTGAAG...CATGCCGCGGTGACGGGGCTCTCCGTGGAGGAAGTGGTGCGCCGCAGCGCGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369426.9
CDS-3UTR CCA 90 bp GCCCGCGCTGCGGCGCACCACTTCCTCCACGGAGAGCCCCGTCACCGCGGCATGAATGGACTCGGGCACTaGAAAGAACTCCCCATACTT +
Preference number: 4 (lower is better)
Translates to: ARAAAHHFLHGEPRHRGMNGLGH*KELPIL
Trigger: AAGTATGGGGAGTTCTTTCCAGTGCCCGAGTCCATT...CATGCCGCGGTGACGGGGCTCTCCGTGGAGGAAGTGGTGCGCCGCAGCGCGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369426.9
CDS-3UTR TCA 90 bp CGTCACCGCGGCATGCACCGCCACTATGTTGGACACGCCAGCGCGGCCAGCCGGTGTTTCCTTTACCCATaGTCCAGGCTAGCTCCAAGA +
Preference number: 4 (lower is better)
Translates to: RHRGMHRHYVGHASAASRCFLYP*SRLAPR
Trigger: TCTTGGAGCTAGCCTGGATCATGGGTAAAGGAAACA...CCGGCTGGCCGCGCTGGCGTGTCCAACATAGTGGCGGTGCATGCCGCGGTGACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369426.9
CDS-3UTR CCA 90 bp TGCCCGCGCTGCGGCGCACCACTTCCTCCACGGAGAGCCCCGTCACCGCGGCATGGATGGGGCGTTTTGTaGATTAACATGTGTTCTGAC +
Preference number: 4 (lower is better)
Translates to: CPRCGAPLPPRRAPSPRHGWGVL*INMCSD
Trigger: GTCAGAACACATGTTAATCCACAAAACGCCCCATCC...ATGCCGCGGTGACGGGGCTCTCCGTGGAGGAAGTGGTGCGCCGCAGCGCGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369426.9
CDS-3UTR TCA 90 bp GGCGCACCACTTCCTCCACGGAGAGCCCCGTCACCGCGGCATGCACCGCCACTAACAAAAGCCTTGCTGTaGTTCGTTGAAACTTCCTAT +
Preference number: 4 (lower is better)
Translates to: GAPLPPRRAPSPRHAPPLTKALL*FVETSY
Trigger: ATAGGAAGTTTCAACGAATCACAGCAAGGCTTTTGT...TAGTGGCGGTGCATGCCGCGGTGACGGGGCTCTCCGTGGAGGAAGTGGTGCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369426.9
CDS-3UTR CCA 90 bp TGCCCGCGCTGCGGCGCACCACTTCCTCCACGGAGAGCCCCGTCACCGCGGCATTTTGTTGATGGGATTTaGAACACTGTCGTATTTCAA +
Preference number: 4 (lower is better)
Translates to: CPRCGAPLPPRRAPSPRHFVDGI*NTVVFQ
Trigger: TTGAAATACGACAGTGTTCCAAATCCCATCAACAAA...ATGCCGCGGTGACGGGGCTCTCCGTGGAGGAAGTGGTGCGCCGCAGCGCGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369426.9
CDS-3UTR TCA 90 bp TGCAATGAGCGTAGAGGAGAGAACTTGGGACCCGCCTTGGGGATTTTGATGGGGTCCATGTGCTGGACTTaGTCCTCCCCAACAGGAACG +
Preference number: 4 (lower is better)
Translates to: CNERRGENLGPALGILMGSMCWT*SSPTGT
Trigger: CGTTCCTGTTGGGGAGGATCAAGTCCAGCACATGGA...CCCCATCAAAATCCCCAAGGCGGGTCCCAAGTTCTCTCCTCTACGCTCATTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR GCA 90 bp GTTATTCGGACGGTGGCCAGTTTGTCAGGGTCTGATTTCGACATTTTGGCAGAAAGCGAGCAGTGTTCATaGCCGCGCTGCGGCGCACCA +
Preference number: 4 (lower is better)
Translates to: VIRTVASLSGSDFDILAESEQCS*PRCGAP
Trigger: TGGTGCGCCGCAGCGCGGGCATGAACACTGCTCGCT...TTCTGCCAAAATGTCGAAATCAGACCCTGACAAACTGGCCACCGTCCGAATAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369426.9
CDS-3UTR GCA 90 bp GTTATTCGGACGGTGGCCAGTTTGTCAGGGTCTGATTTCGACATTTTGGCAGAACCCGTCACCGCGGCATaGACCGCCACTATGTTGGAC +
Preference number: 4 (lower is better)
Translates to: VIRTVASLSGSDFDILAEPVTAA*TATMLD
Trigger: GTCCAACATAGTGGCGGTGCATGCCGCGGTGACGGG...TTCTGCCAAAATGTCGAAATCAGACCCTGACAAACTGGCCACCGTCCGAATAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369426.9
CDS-3UTR GCA 90 bp TGCAATGAGCGTAGAGGAGAGAACTTGGGACCCGCCTTGGGGATTTTGATGGGGGTGCCATCGTGCTTCTaGTTGGTAGTCTTTGCCTTC +
Preference number: 4 (lower is better)
Translates to: CNERRGENLGPALGILMGVPSCF*LVVFAF
Trigger: GAAGGCAAAGACTACCAAGCAGAAGCACGATGGCAC...CCCCATCAAAATCCCCAAGGCGGGTCCCAAGTTCTCTCCTCTACGCTCATTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR GCA 90 bp TGGGATGGGGCGTTTTGTGGATTAACATGTGTTCTGACACAAGGACTACTCTACCCCGTCACCGCGGCATaGACCGCCACTATGTTGGAC +
Preference number: 4 (lower is better)
Translates to: WDGAFCGLTCVLTQGLLYPVTAA*TATMLD
Trigger: GTCCAACATAGTGGCGGTGCATGCCGCGGTGACGGG...GTAGAGTAGTCCTTGTGTCAGAACACATGTTAATCCACAAAACGCCCCATCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR GCA 90 bp CTGCCGTTATCAGAATGCATGGAGTGCAAGGCACAAAAGCCTTGCTGTGATTCGCAGTCATGTCCAGGATaGTCTGCCGAAGGACAGCTG +
Preference number: 4 (lower is better)
Translates to: LPLSECMECKAQKPCCDSQSCPG*SAEGQL
Trigger: CAGCTGTCCTTCGGCAGAGCATCCTGGACATGACTG...CGAATCACAGCAAGGCTTTTGTGCCTTGCACTCCATGCATTCTGATAACGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR CCA 90 bp AATTTCTGCACTATCTCCTCTGGGCTGTCTGTTATTCGGACGGTGGCCAGTTTGCTGCCGAAGGACAGCTaGGTCTTGGGGGACAGTAAT +
Preference number: 4 (lower is better)
Translates to: NFCTISSGLSVIRTVASLLPKDS*VLGDSN
Trigger: ATTACTGTCCCCCAAGACCCAGCTGTCCTTCGGCAG...CAAACTGGCCACCGTCCGAATAACAGACAGCCCAGAGGAGATAGTGCAGAAATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369426.9
CDS-3UTR CCA 90 bp TTTAGGAAAGCTGCCGTTATCAGAATGCATGGAGTGCAAGGCACAAAAGCCTTGGGCTGCCTGGAGTACTaGGTATGTGAGCAGGCCCAC +
Preference number: 4 (lower is better)
Translates to: FRKAAVIRMHGVQGTKALGCLEY*VCEQAH
Trigger: GTGGGCCTGCTCACATACCCAGTACTCCAGGCAGCC...CAAGGCTTTTGTGCCTTGCACTCCATGCATTCTGATAACGGCAGCTTTCCTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR TCA 90 bp TGGGATGGGGCGTTTTGTGGATTAACATGTGTTCTGACACAAGGACTACTCTACACGCGCTTTCCGCATTaGGTGCAGCGCCATCTTGAG +
Preference number: 4 (lower is better)
Translates to: WDGAFCGLTCVLTQGLLYTRFPH*VQRHLE
Trigger: CTCAAGATGGCGCTGCACTCAATGCGGAAAGCGCGT...GTAGAGTAGTCCTTGTGTCAGAACACATGTTAATCCACAAAACGCCCCATCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000235521.5
CDS-3UTR TCA 90 bp CCAAATTACTCCTTACTTCAATCACATTTCTGCAGGCCAAGGAGTGTGCCTCAATATGAAGTGCCCGGATaGAGCTCCAGCGCTCACGCG +
Preference number: 4 (lower is better)
Translates to: PNYSLLQSHFCRPRSVPQYEVPG*SSSAHA
Trigger: CGCGTGAGCGCTGGAGCTTCATCCGGGCACTTCATA...TTGAGGCACACTCCTTGGCCTGCAGAAATGTGATTGAAGTAAGGAGTAATTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR TCA 90 bp TGCAATGAGCGTAGAGGAGAGAACTTGGGACCCGCCTTGGGGATTTTGATGGGGCCCCATACTTCTTGTTaGAACCTTGTGCTAGATCCT +
Preference number: 4 (lower is better)
Translates to: CNERRGENLGPALGILMGPHTSC*NLVLDP
Trigger: AGGATCTAGCACAAGGTTTCAACAAGAAGTATGGGG...CCCCATCAAAATCCCCAAGGCGGGTCCCAAGTTCTCTCCTCTACGCTCATTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR GCA 90 bp CTGCCGTTATCAGAATGCATGGAGTGCAAGGCACAAAAGCCTTGCTGTGATTCGGCCTTGCGGAATTTCTaGACTATCTCCTCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: LPLSECMECKAQKPCCDSALRNF*TISSGL
Trigger: CAGCCCAGAGGAGATAGTGCAGAAATTCCGCAAGGC...CGAATCACAGCAAGGCTTTTGTGCCTTGCACTCCATGCATTCTGATAACGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR CCA 90 bp CTGCCGTTATCAGAATGCATGGAGTGCAAGGCACAAAAGCCTTGCTGTGATTCGCTGTTATTCGGACGGTaGCCAGTTTGTCAGGGTCTG +
Preference number: 4 (lower is better)
Translates to: LPLSECMECKAQKPCCDSLLFGR*PVCQGL
Trigger: CAGACCCTGACAAACTGGCCACCGTCCGAATAACAG...CGAATCACAGCAAGGCTTTTGTGCCTTGCACTCCATGCATTCTGATAACGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR CCA 90 bp CTGCCGTTATCAGAATGCATGGAGTGCAAGGCACAAAAGCCTTGCTGTGATTCGGTAGAGGAGAGAACTTaGGACCCGCCTTGGGGATTT +
Preference number: 4 (lower is better)
Translates to: LPLSECMECKAQKPCCDSVEERT*DPPWGF
Trigger: AAATCCCCAAGGCGGGTCCCAAGTTCTCTCCTCTAC...CGAATCACAGCAAGGCTTTTGTGCCTTGCACTCCATGCATTCTGATAACGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR GCA 90 bp AATTTCTGCACTATCTCCTCTGGGCTGTCTGTTATTCGGACGGTGGCCAGTTTGGTGCCATCGTGCTTCTaGTTGGTAGTCTTTGCCTTC +
Preference number: 4 (lower is better)
Translates to: NFCTISSGLSVIRTVASLVPSCF*LVVFAF
Trigger: GAAGGCAAAGACTACCAAGCAGAAGCACGATGGCAC...CAAACTGGCCACCGTCCGAATAACAGACAGCCCAGAGGAGATAGTGCAGAAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369426.9
CDS-3UTR CCA 90 bp TGGGATGGGGCGTTTTGTGGATTAACATGTGTTCTGACACAAGGACTACTCTACTTCTTGCTGTCTTTCTaGAGAGCGGGAGCAGCTGCG +
Preference number: 4 (lower is better)
Translates to: WDGAFCGLTCVLTQGLLYFLLSF*RAGAAA
Trigger: CGCAGCTGCTCCCGCTCTCCAGAAAGACAGCAAGAA...GTAGAGTAGTCCTTGTGTCAGAACACATGTTAATCCACAAAACGCCCCATCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR CCA 90 bp AAGCTGCCGTTATCAGAATGCATGGAGTGCAAGGCACAAAAGCCTTGCTGTGATTCACCCAGCTCTCAATaGCTCCCAGGTAATTGCCCA +
Preference number: 4 (lower is better)
Translates to: KLPLSECMECKAQKPCCDSPSSQ*LPGNCP
Trigger: TGGGCAATTACCTGGGAGCCATTGAGAGCTGGGTGA...ATCACAGCAAGGCTTTTGTGCCTTGCACTCCATGCATTCTGATAACGGCAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR GCA 90 bp TGGGATGGGGCGTTTTGTGGATTAACATGTGTTCTGACACAAGGACTACTCTACCCCACCGTGCCATCGTaGTTCTGCTTGGTAGTCTTT +
Preference number: 4 (lower is better)
Translates to: WDGAFCGLTCVLTQGLLYPTVPS*FCLVVF
Trigger: AAAGACTACCAAGCAGAAGCACGATGGCACGGTGGG...GTAGAGTAGTCCTTGTGTCAGAACACATGTTAATCCACAAAACGCCCCATCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR GCA 90 bp TGGGATGGGGCGTTTTGTGGATTAACATGTGTTCTGACACAAGGACTACTCTACGCCTTGCGGAATTTCTaGACTATCTCCTCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: WDGAFCGLTCVLTQGLLYALRNF*TISSGL
Trigger: CAGCCCAGAGGAGATAGTGCAGAAATTCCGCAAGGC...GTAGAGTAGTCCTTGTGTCAGAACACATGTTAATCCACAAAACGCCCCATCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR GCA 90 bp TCTGATTTGTCAGTCTTCACTGCTATTGTAGACTGGCAGAACCTATTTCAAAGTTGTTCATGCCCGCGCTaGGGCGCACCACTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: SDLSVFTAIVDWQNLFQSCSCPR*GAPLPP
Trigger: TGGAGGAAGTGGTGCGCCGCAGCGCGGGCATGAACA...ACTTTGAAATAGGTTCTGCCAGTCTACAATAGCAGTGAAGACTGACAAATCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR GCA 90 bp AGTATTTCTGCAATGAGCGTAGAGGAGAGAACTTGGGACCCGCCTTGGGGATTTTCAGAATGCATGGAGTaGAAGGCACAAAAGCCTTGC +
Preference number: 4 (lower is better)
Translates to: SISAMSVEERTWDPPWGFSECME*KAQKPC
Trigger: GCAAGGCTTTTGTGCCTTGCACTCCATGCATTCTGA...AAATCCCCAAGGCGGGTCCCAAGTTCTCTCCTCTACGCTCATTGCAGAAATACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR CCA 90 bp TGGGATGGGGCGTTTTGTGGATTAACATGTGTTCTGACACAAGGACTACTCTACTCACCCAGCTCTCAATaGCTCCCAGGTAATTGCCCA +
Preference number: 4 (lower is better)
Translates to: WDGAFCGLTCVLTQGLLYSPSSQ*LPGNCP
Trigger: TGGGCAATTACCTGGGAGCCATTGAGAGCTGGGTGA...GTAGAGTAGTCCTTGTGTCAGAACACATGTTAATCCACAAAACGCCCCATCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR CCA 90 bp AGTATTTCTGCAATGAGCGTAGAGGAGAGAACTTGGGACCCGCCTTGGGGATTTAATGGACTCGGGCACTaGAAAGAACTCCCCATACTT +
Preference number: 4 (lower is better)
Translates to: SISAMSVEERTWDPPWGFNGLGH*KELPIL
Trigger: AAGTATGGGGAGTTCTTTCCAGTGCCCGAGTCCATT...AAATCCCCAAGGCGGGTCCCAAGTTCTCTCCTCTACGCTCATTGCAGAAATACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR CCA 90 bp ATTTCAAAGTATTTCTGCAATGAGCGTAGAGGAGAGAACTTGGGACCCGCCTTGCTGTTATTCGGACGGTaGCCAGTTTGTCAGGGTCTG +
Preference number: 4 (lower is better)
Translates to: ISKYFCNERRGENLGPALLLFGR*PVCQGL
Trigger: CAGACCCTGACAAACTGGCCACCGTCCGAATAACAG...CAAGGCGGGTCCCAAGTTCTCTCCTCTACGCTCATTGCAGAAATACTTTGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR TCA 90 bp TGTTGTTCACAGCATTTTGTTGATGGGATTTGGAACACTGTCGTATTTCAAAGCTATGAAGTGCCCGGATaGAGCTCCAGCGCTCACGCG +
Preference number: 4 (lower is better)
Translates to: CCSQHFVDGIWNTVVFQSYEVPG*SSSAHA
Trigger: CGCGTGAGCGCTGGAGCTTCATCCGGGCACTTCATA...GCTTTGAAATACGACAGTGTTCCAAATCCCATCAACAAAATGCTGTGAACAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR TCA 90 bp TTGGGAATATCTGATTTGTCAGTCTTCACTGCTATTGTAGACTGGCAGAACCTAGCTGCGGATCCCTTATaGAGTGCCCGGATGAAGCTC +
Preference number: 4 (lower is better)
Translates to: LGISDLSVFTAIVDWQNLAADPL*SARMKL
Trigger: GAGCTTCATCCGGGCACTTCATAAGGGATCCGCAGC...TAGGTTCTGCCAGTCTACAATAGCAGTGAAGACTGACAAATCAGATATTCCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR TCA 90 bp TTTAGGAAAGCTGCCGTTATCAGAATGCATGGAGTGCAAGGCACAAAAGCCTTGGTAATCGAGGTAGTCTaGCCATGCAGGAAAGGATCC +
Preference number: 4 (lower is better)
Translates to: FRKAAVIRMHGVQGTKALVIEVV*PCRKGS
Trigger: GGATCCTTTCCTGCATGGTCAGACTACCTCGATTAC...CAAGGCTTTTGTGCCTTGCACTCCATGCATTCTGATAACGGCAGCTTTCCTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR TCA 90 bp AGGAAAGCTGCCGTTATCAGAATGCATGGAGTGCAAGGCACAAAAGCCTTGCTGCCCCATACTTCTTGTTaGAACCTTGTGCTAGATCCT +
Preference number: 4 (lower is better)
Translates to: RKAAVIRMHGVQGTKALLPHTSC*NLVLDP
Trigger: AGGATCTAGCACAAGGTTTCAACAAGAAGTATGGGG...CAGCAAGGCTTTTGTGCCTTGCACTCCATGCATTCTGATAACGGCAGCTTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR GCA 90 bp TTCTTTTTAGGAAAGCTGCCGTTATCAGAATGCATGGAGTGCAAGGCACAAAAGGGATCCCTTATGAAGTaGCCGGATGAAGCTCCAGCG +
Preference number: 4 (lower is better)
Translates to: FFLGKLPLSECMECKAQKGSLMK*PDEAPA
Trigger: CGCTGGAGCTTCATCCGGGCACTTCATAAGGGATCC...CTTTTGTGCCTTGCACTCCATGCATTCTGATAACGGCAGCTTTCCTAAAAAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR GCA 90 bp CAAATTACTCCTTACTTCAATCACATTTCTGCAGGCCAAGGAGTGTGCCTCAATATGTCCAGGATGCTCTaGCGAAGGACAGCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: QITPYFNHISAGQGVCLNMSRML*RRTAGS
Trigger: AGACCCAGCTGTCCTTCGGCAGAGCATCCTGGACAT...ATTGAGGCACACTCCTTGGCCTGCAGAAATGTGATTGAAGTAAGGAGTAATTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR GCA 90 bp GATGGGATTTGGAACACTGTCGTATTTCAAAGCTACAAAGCAATATTCATCAAAAGCGAGCAGTGTTCATaGCCGCGCTGCGGCGCACCA +
Preference number: 4 (lower is better)
Translates to: DGIWNTVVFQSYKAIFIKSEQCS*PRCGAP
Trigger: TGGTGCGCCGCAGCGCGGGCATGAACACTGCTCGCT...TTTGATGAATATTGCTTTGTAGCTTTGAAATACGACAGTGTTCCAAATCCCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR CCA 90 bp AAACATCATCAGTCGTTCCAACACCCACCTTCAAAATCAGAATGTTTAGAGTCTGGCTGCCTGGAGTACTaGGTATGTGAGCAGGCCCAC +
Preference number: 4 (lower is better)
Translates to: KHHQSFQHPPSKSECLESGCLEY*VCEQAH
Trigger: GTGGGCCTGCTCACATACCCAGTACTCCAGGCAGCC...AGACTCTAAACATTCTGATTTTGAAGGTGGGTGTTGGAACGACTGATGATGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR CCA 90 bp TTTATGAGCTCTGAATACAAATTGGCATCTGATCAAATGGCATCTCAAGGATTAGCACCGCCACTATGTTaGACACGCCAGCGCGGCCAG +
Preference number: 4 (lower is better)
Translates to: FMSSEYKLASDQMASQGLAPPLC*TRQRGQ
Trigger: CTGGCCGCGCTGGCGTGTCCAACATAGTGGCGGTGC...TAATCCTTGAGATGCCATTTGATCAGATGCCAATTTGTATTCAGAGCTCATAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR CCA 90 bp CTGCCGTTATCAGAATGCATGGAGTGCAAGGCACAAAAGCCTTGCTGTGATTCGGGATGGGGCGTTTTGTaGATTAACATGTGTTCTGAC +
Preference number: 4 (lower is better)
Translates to: LPLSECMECKAQKPCCDSGWGVL*INMCSD
Trigger: GTCAGAACACATGTTAATCCACAAAACGCCCCATCC...CGAATCACAGCAAGGCTTTTGTGCCTTGCACTCCATGCATTCTGATAACGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR TCA 90 bp AAGCTGCCGTTATCAGAATGCATGGAGTGCAAGGCACAAAAGCCTTGCTGTGATCAGTTTGTCAGGGTCTaGTTTCGACATTTTGGCAGA +
Preference number: 4 (lower is better)
Translates to: KLPLSECMECKAQKPCCDQFVRV*FRHFGR
Trigger: TCTGCCAAAATGTCGAAATCAGACCCTGACAAACTG...ATCACAGCAAGGCTTTTGTGCCTTGCACTCCATGCATTCTGATAACGGCAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR TCA 90 bp AGTATTTCTGCAATGAGCGTAGAGGAGAGAACTTGGGACCCGCCTTGGGGATTTGTCATTGGGAATATCTaGTTTGTCAGTCTTCACTGC +
Preference number: 4 (lower is better)
Translates to: SISAMSVEERTWDPPWGFVIGNI*FVSLHC
Trigger: GCAGTGAAGACTGACAAATCAGATATTCCCAATGAC...AAATCCCCAAGGCGGGTCCCAAGTTCTCTCCTCTACGCTCATTGCAGAAATACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR GCA 90 bp TGTTGTTCACAGCATTTTGTTGATGGGATTTGGAACACTGTCGTATTTCAAAGCGAGAGCGGGAGCAGCTaGGGATCCCTTATGAAGTGC +
Preference number: 4 (lower is better)
Translates to: CCSQHFVDGIWNTVVFQSESGSS*GSLMKC
Trigger: GCACTTCATAAGGGATCCGCAGCTGCTCCCGCTCTC...GCTTTGAAATACGACAGTGTTCCAAATCCCATCAACAAAATGCTGTGAACAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR GCA 90 bp AAAAGGGTTGAAGTAGATAACGTGTGCATCTGTTACAGTAAGTACTCCAGAGAGCAGTCATGTCCAGGATaGTCTGCCGAAGGACAGCTG +
Preference number: 4 (lower is better)
Translates to: KRVEVDNVCICYSKYSREQSCPG*SAEGQL
Trigger: CAGCTGTCCTTCGGCAGAGCATCCTGGACATGACTG...CTCTCTGGAGTACTTACTGTAACAGATGCACACGTTATCTACTTCAACCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR GCA 90 bp GATGGGATTTGGAACACTGTCGTATTTCAAAGCTACAAAGCAATATTCATCAAATGTTCATGCCCGCGCTaGGGCGCACCACTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: DGIWNTVVFQSYKAIFIKCSCPR*GAPLPP
Trigger: TGGAGGAAGTGGTGCGCCGCAGCGCGGGCATGAACA...TTTGATGAATATTGCTTTGTAGCTTTGAAATACGACAGTGTTCCAAATCCCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR GCA 90 bp TTTAGGAAAGCTGCCGTTATCAGAATGCATGGAGTGCAAGGCACAAAAGCCTTGCTTCAATCACATTTCTaGAGGCCAAGGAGTGTGCCT +
Preference number: 4 (lower is better)
Translates to: FRKAAVIRMHGVQGTKALLQSHF*RPRSVP
Trigger: AGGCACACTCCTTGGCCTGCAGAAATGTGATTGAAG...CAAGGCTTTTGTGCCTTGCACTCCATGCATTCTGATAACGGCAGCTTTCCTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR CCA 90 bp TTGGGAATATCTGATTTGTCAGTCTTCACTGCTATTGTAGACTGGCAGAACCTATTCTTGCTGTCTTTCTaGAGAGCGGGAGCAGCTGCG +
Preference number: 4 (lower is better)
Translates to: LGISDLSVFTAIVDWQNLFLLSF*RAGAAA
Trigger: CGCAGCTGCTCCCGCTCTCCAGAAAGACAGCAAGAA...TAGGTTCTGCCAGTCTACAATAGCAGTGAAGACTGACAAATCAGATATTCCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR CCA 90 bp AAGCTGCCGTTATCAGAATGCATGGAGTGCAAGGCACAAAAGCCTTGCTGTGATGGGACAGTAATGGAGTaGAGGTCAACAATGCTGTAT +
Preference number: 4 (lower is better)
Translates to: KLPLSECMECKAQKPCCDGTVME*RSTMLY
Trigger: ATACAGCATTGTTGACCTCCACTCCATTACTGTCCC...ATCACAGCAAGGCTTTTGTGCCTTGCACTCCATGCATTCTGATAACGGCAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR CCA 90 bp CCAAATTACTCCTTACTTCAATCACATTTCTGCAGGCCAAGGAGTGTGCCTCAACTGCACTATCTCCTCTaGGCTGTCTGTTATTCGGAC +
Preference number: 4 (lower is better)
Translates to: PNYSLLQSHFCRPRSVPQLHYLL*AVCYSD
Trigger: GTCCGAATAACAGACAGCCCAGAGGAGATAGTGCAG...TTGAGGCACACTCCTTGGCCTGCAGAAATGTGATTGAAGTAAGGAGTAATTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR TCA 90 bp CTGGGATGGGGCGTTTTGTGGATTAACATGTGTTCTGACACAAGGACTACTCTAGTGTGTTCAGACACCTaGGATTGTTGGAAAAGGATG +
Preference number: 4 (lower is better)
Translates to: LGWGVLWINMCSDTRTTLVCSDT*DCWKRM
Trigger: CATCCTTTTCCAACAATCTCAGGTGTCTGAACACAC...TAGAGTAGTCCTTGTGTCAGAACACATGTTAATCCACAAAACGCCCCATCCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR TCA 90 bp AAAAGGGTTGAAGTAGATAACGTGTGCATCTGTTACAGTAAGTACTCCAGAGAGCCAACACACACATACTaGGAATGGACTCGGGCACTG +
Preference number: 4 (lower is better)
Translates to: KRVEVDNVCICYSKYSREPTHTY*EWTRAL
Trigger: CAGTGCCCGAGTCCATTCTCAGTATGTGTGTGTTGG...CTCTCTGGAGTACTTACTGTAACAGATGCACACGTTATCTACTTCAACCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369426.9
CDS-3UTR GCA 90 bp CAAATTACTCCTTACTTCAATCACATTTCTGCAGGCCAAGGAGTGTGCCTCAATCAACAGAATGTCGGCTaGCTGGAGTACTGGGTATGT +
Preference number: 4 (lower is better)
Translates to: QITPYFNHISAGQGVCLNQQNVG*LEYWVC
Trigger: ACATACCCAGTACTCCAGGCAGCCGACATTCTGTTG...ATTGAGGCACACTCCTTGGCCTGCAGAAATGTGATTGAAGTAAGGAGTAATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR GCA 90 bp TCCTATAGAAAACCCACCAATTTCTTCACCTCCTGGCACACAGTGTATGCTAATCAACAGAATGTCGGCTaGCTGGAGTACTGGGTATGT +
Preference number: 4 (lower is better)
Translates to: SYRKPTNFFTSWHTVYANQQNVG*LEYWVC
Trigger: ACATACCCAGTACTCCAGGCAGCCGACATTCTGTTG...ATTAGCATACACTGTGTGCCAGGAGGTGAAGAAATTGGTGGGTTTTCTATAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369426.9
CDS-3UTR GCA 90 bp AAACATCATCAGTCGTTCCAACACCCACCTTCAAAATCAGAATGTTTAGAGTCTCTCAATCACAGCATCTaGCACGGCCAGCTTGTAGCG +
Preference number: 4 (lower is better)
Translates to: KHHQSFQHPPSKSECLESLNHSI*HGQLVA
Trigger: CGCTACAAGCTGGCCGTGGCAGATGCTGTGATTGAG...AGACTCTAAACATTCTGATTTTGAAGGTGGGTGTTGGAACGACTGATGATGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR GCA 90 bp AGGAAAGCTGCCGTTATCAGAATGCATGGAGTGCAAGGCACAAAAGCCTTGCTGAAGGCACAAAAGCCTTaGTGTGATTCGTTGAAACTT +
Preference number: 4 (lower is better)
Translates to: RKAAVIRMHGVQGTKALLKAQKP*CDSLKL
Trigger: AAGTTTCAACGAATCACAGCAAGGCTTTTGTGCCTT...CAGCAAGGCTTTTGTGCCTTGCACTCCATGCATTCTGATAACGGCAGCTTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR CCA 90 bp CTGGGATGGGGCGTTTTGTGGATTAACATGTGTTCTGACACAAGGACTACTCTACTGATTTCGACATTTTaGCAGAAGGATCACGTAGGG +
Preference number: 4 (lower is better)
Translates to: LGWGVLWINMCSDTRTTLLISTF*QKDHVG
Trigger: CCCTACGTGATCCTTCTGCCAAAATGTCGAAATCAG...TAGAGTAGTCCTTGTGTCAGAACACATGTTAATCCACAAAACGCCCCATCCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR CCA 90 bp AGGAAAGCTGCCGTTATCAGAATGCATGGAGTGCAAGGCACAAAAGCCTTGCTGAAAACCTTCTCTAAATaGTCCTTGTCCAGCTTCAGT +
Preference number: 4 (lower is better)
Translates to: RKAAVIRMHGVQGTKALLKTFSK*SLSSFS
Trigger: ACTGAAGCTGGACAAGGACCATTTAGAGAAGGTTTT...CAGCAAGGCTTTTGTGCCTTGCACTCCATGCATTCTGATAACGGCAGCTTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR CCA 90 bp TGGGATGGGGCGTTTTGTGGATTAACATGTGTTCTGACACAAGGACTACTCTACGTGTGCCTCAATAATTaGGGATTCAGACAGCTATGC +
Preference number: 4 (lower is better)
Translates to: WDGAFCGLTCVLTQGLLYVCLNN*GFRQLC
Trigger: GCATAGCTGTCTGAATCCCCAATTATTGAGGCACAC...GTAGAGTAGTCCTTGTGTCAGAACACATGTTAATCCACAAAACGCCCCATCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR TCA 90 bp TTTATGAGCTCTGAATACAAATTGGCATCTGATCAAATGGCATCTCAAGGATTAGCTGCGGATCCCTTATaGAGTGCCCGGATGAAGCTC +
Preference number: 4 (lower is better)
Translates to: FMSSEYKLASDQMASQGLAADPL*SARMKL
Trigger: GAGCTTCATCCGGGCACTTCATAAGGGATCCGCAGC...TAATCCTTGAGATGCCATTTGATCAGATGCCAATTTGTATTCAGAGCTCATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR TCA 90 bp TCTTATGGAGTGATATCGTACAAGCTAATTGGATTCTCTCAGCCTCACTTTCCTGTAATCGAGGTAGTCTaGCCATGCAGGAAAGGATCC +
Preference number: 4 (lower is better)
Translates to: SYGVISYKLIGFSQPHFPVIEVV*PCRKGS
Trigger: GGATCCTTTCCTGCATGGTCAGACTACCTCGATTAC...AGGAAAGTGAGGCTGAGAGAATCCAATTAGCTTGTACGATATCACTCCATAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR TCA 90 bp ATGAGCTCTGAATACAAATTGGCATCTGATCAAATGGCATCTCAAGGATTATACTCCATGTGCTGGACTTaGTCCTCCCCAACAGGAACG +
Preference number: 4 (lower is better)
Translates to: MSSEYKLASDQMASQGLYSMCWT*SSPTGT
Trigger: CGTTCCTGTTGGGGAGGATCAAGTCCAGCACATGGA...GTATAATCCTTGAGATGCCATTTGATCAGATGCCAATTTGTATTCAGAGCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR TCA 90 bp GGATGGGGCGTTTTGTGGATTAACATGTGTTCTGACACAAGGACTACTCTACTTGTGACCACGGTTCTGTaGATCCAGATTTTAAGTTCG +
Preference number: 4 (lower is better)
Translates to: GWGVLWINMCSDTRTTLLVTTVL*IQILSS
Trigger: CGAACTTAAAATCTGGATTCACAGAACCGTGGTCAC...AAGTAGAGTAGTCCTTGTGTCAGAACACATGTTAATCCACAAAACGCCCCATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR TCA 90 bp CAAATTACTCCTTACTTCAATCACATTTCTGCAGGCCAAGGAGTGTGCCTCAATTGTTTCCTTTACCCATaGTCCAGGCTAGCTCCAAGA +
Preference number: 4 (lower is better)
Translates to: QITPYFNHISAGQGVCLNCFLYP*SRLAPR
Trigger: TCTTGGAGCTAGCCTGGATCATGGGTAAAGGAAACA...ATTGAGGCACACTCCTTGGCCTGCAGAAATGTGATTGAAGTAAGGAGTAATTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR GCA 90 bp ATGAGCTCTGAATACAAATTGGCATCTGATCAAATGGCATCTCAAGGATTATACGGATCCCTTATGAAGTaGCCGGATGAAGCTCCAGCG +
Preference number: 4 (lower is better)
Translates to: MSSEYKLASDQMASQGLYGSLMK*PDEAPA
Trigger: CGCTGGAGCTTCATCCGGGCACTTCATAAGGGATCC...GTATAATCCTTGAGATGCCATTTGATCAGATGCCAATTTGTATTCAGAGCTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR GCA 90 bp GTACTGAATAAACAAGCACTATTCTTAAGAATAAGGGGTAAGGGTTTTACTCTCGAGAGCGGGAGCAGCTaGGGATCCCTTATGAAGTGC +
Preference number: 4 (lower is better)
Translates to: VLNKQALFLRIRGKGFTLESGSS*GSLMKC
Trigger: GCACTTCATAAGGGATCCGCAGCTGCTCCCGCTCTC...GAGAGTAAAACCCTTACCCCTTATTCTTAAGAATAGTGCTTGTTTATTCAGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR GCA 90 bp TTGGGAATATCTGATTTGTCAGTCTTCACTGCTATTGTAGACTGGCAGAACCTAGCAGGCCAAGGAGTGTaGCTCAATAATTGGGGATTC +
Preference number: 4 (lower is better)
Translates to: LGISDLSVFTAIVDWQNLAGQGV*LNNWGF
Trigger: GAATCCCCAATTATTGAGGCACACTCCTTGGCCTGC...TAGGTTCTGCCAGTCTACAATAGCAGTGAAGACTGACAAATCAGATATTCCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR GCA 90 bp AAGCTGCCGTTATCAGAATGCATGGAGTGCAAGGCACAAAAGCCTTGCTGTGATTTTGTCAGTCTTCACTaGTATTGTAGACTGGCAGAA +
Preference number: 4 (lower is better)
Translates to: KLPLSECMECKAQKPCCDFVSLH*YCRLAE
Trigger: TTCTGCCAGTCTACAATAGCAGTGAAGACTGACAAA...ATCACAGCAAGGCTTTTGTGCCTTGCACTCCATGCATTCTGATAACGGCAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR CCA 90 bp ATGAGCTCTGAATACAAATTGGCATCTGATCAAATGGCATCTCAAGGATTATACCTGCCGAAGGACAGCTaGGTCTTGGGGGACAGTAAT +
Preference number: 4 (lower is better)
Translates to: MSSEYKLASDQMASQGLYLPKDS*VLGDSN
Trigger: ATTACTGTCCCCCAAGACCCAGCTGTCCTTCGGCAG...GTATAATCCTTGAGATGCCATTTGATCAGATGCCAATTTGTATTCAGAGCTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR CCA 90 bp TGTTGTTCACAGCATTTTGTTGATGGGATTTGGAACACTGTCGTATTTCAAAGCAGAATGTCGGCTGCCTaGAGTACTGGGTATGTGAGC +
Preference number: 4 (lower is better)
Translates to: CCSQHFVDGIWNTVVFQSRMSAA*STGYVS
Trigger: GCTCACATACCCAGTACTCCAGGCAGCCGACATTCT...GCTTTGAAATACGACAGTGTTCCAAATCCCATCAACAAAATGCTGTGAACAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR CCA 90 bp AAACATCATCAGTCGTTCCAACACCCACCTTCAAAATCAGAATGTTTAGAGTCTAGAATGTCGGCTGCCTaGAGTACTGGGTATGTGAGC +
Preference number: 4 (lower is better)
Translates to: KHHQSFQHPPSKSECLESRMSAA*STGYVS
Trigger: GCTCACATACCCAGTACTCCAGGCAGCCGACATTCT...AGACTCTAAACATTCTGATTTTGAAGGTGGGTGTTGGAACGACTGATGATGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR CCA 90 bp GTTATTCGGACGGTGGCCAGTTTGTCAGGGTCTGATTTCGACATTTTGGCAGAAAACGATGTTTTAATTTaGAATCTGGGATGGGGCGTT +
Preference number: 4 (lower is better)
Translates to: VIRTVASLSGSDFDILAENDVLI*NLGWGV
Trigger: AACGCCCCATCCCAGATTCCAAATTAAAACATCGTT...TTCTGCCAAAATGTCGAAATCAGACCCTGACAAACTGGCCACCGTCCGAATAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000369426.9
CDS-3UTR TCA 90 bp AAAAGGGTTGAAGTAGATAACGTGTGCATCTGTTACAGTAAGTACTCCAGAGAGAGGATTCCTGTAGGTTaGATGCCGGAAAATACTCGC +
Preference number: 4 (lower is better)
Translates to: KRVEVDNVCICYSKYSRERIPVG*MPENTR
Trigger: GCGAGTATTTTCCGGCATTCAACCTACAGGAATCCT...CTCTCTGGAGTACTTACTGTAACAGATGCACACGTTATCTACTTCAACCCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR GCA 90 bp AAGCTGCCGTTATCAGAATGCATGGAGTGCAAGGCACAAAAGCCTTGCTGTGATAGTGGAGGTCAACAATaGTGTATAATACAGAGTCAT +
Preference number: 4 (lower is better)
Translates to: KLPLSECMECKAQKPCCDSGGQQ*CIIQSH
Trigger: ATGACTCTGTATTATACAGCATTGTTGACCTCCACT...ATCACAGCAAGGCTTTTGTGCCTTGCACTCCATGCATTCTGATAACGGCAGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR GCA 90 bp GTACTGAATAAACAAGCACTATTCTTAAGAATAAGGGGTAAGGGTTTTACTCTCATGTCCAGGATGCTCTaGCGAAGGACAGCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: VLNKQALFLRIRGKGFTLMSRML*RRTAGS
Trigger: AGACCCAGCTGTCCTTCGGCAGAGCATCCTGGACAT...GAGAGTAAAACCCTTACCCCTTATTCTTAAGAATAGTGCTTGTTTATTCAGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR GCA 90 bp TTTATGAGCTCTGAATACAAATTGGCATCTGATCAAATGGCATCTCAAGGATTACTCAATCACAGCATCTaGCACGGCCAGCTTGTAGCG +
Preference number: 4 (lower is better)
Translates to: FMSSEYKLASDQMASQGLLNHSI*HGQLVA
Trigger: CGCTACAAGCTGGCCGTGGCAGATGCTGTGATTGAG...TAATCCTTGAGATGCCATTTGATCAGATGCCAATTTGTATTCAGAGCTCATAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR GCA 90 bp TCTTATGGAGTGATATCGTACAAGCTAATTGGATTCTCTCAGCCTCACTTTCCTTCAGAATGCATGGAGTaGAAGGCACAAAAGCCTTGC +
Preference number: 4 (lower is better)
Translates to: SYGVISYKLIGFSQPHFPSECME*KAQKPC
Trigger: GCAAGGCTTTTGTGCCTTGCACTCCATGCATTCTGA...AGGAAAGTGAGGCTGAGAGAATCCAATTAGCTTGTACGATATCACTCCATAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR GCA 90 bp TTGGGAATATCTGATTTGTCAGTCTTCACTGCTATTGTAGACTGGCAGAACCTACTGCCGTTATCAGAATaGATGGAGTGCAAGGCACAA +
Preference number: 4 (lower is better)
Translates to: LGISDLSVFTAIVDWQNLLPLSE*MECKAQ
Trigger: TTGTGCCTTGCACTCCATGCATTCTGATAACGGCAG...TAGGTTCTGCCAGTCTACAATAGCAGTGAAGACTGACAAATCAGATATTCCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR GCA 90 bp AAAAGGGTTGAAGTAGATAACGTGTGCATCTGTTACAGTAAGTACTCCAGAGAGCTGCCGTTATCAGAATaGATGGAGTGCAAGGCACAA +
Preference number: 4 (lower is better)
Translates to: KRVEVDNVCICYSKYSRELPLSE*MECKAQ
Trigger: TTGTGCCTTGCACTCCATGCATTCTGATAACGGCAG...CTCTCTGGAGTACTTACTGTAACAGATGCACACGTTATCTACTTCAACCCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR GCA 90 bp AAGCTGCCGTTATCAGAATGCATGGAGTGCAAGGCACAAAAGCCTTGCTGTGATGAAGTAGATAACGTGTaGATCTGTTACAGTAAGTAC +
Preference number: 4 (lower is better)
Translates to: KLPLSECMECKAQKPCCDEVDNV*ICYSKY
Trigger: GTACTTACTGTAACAGATGCACACGTTATCTACTTC...ATCACAGCAAGGCTTTTGTGCCTTGCACTCCATGCATTCTGATAACGGCAGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR CCA 90 bp GTACTGAATAAACAAGCACTATTCTTAAGAATAAGGGGTAAGGGTTTTACTCTCAGGACAGCTGGGTCTTaGGGGACAGTAATGGAGTGG +
Preference number: 4 (lower is better)
Translates to: VLNKQALFLRIRGKGFTLRTAGS*GTVMEW
Trigger: CCACTCCATTACTGTCCCCCAAGACCCAGCTGTCCT...GAGAGTAAAACCCTTACCCCTTATTCTTAAGAATAGTGCTTGTTTATTCAGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR CCA 90 bp AAACATCATCAGTCGTTCCAACACCCACCTTCAAAATCAGAATGTTTAGAGTCTCTGCACTATCTCCTCTaGGCTGTCTGTTATTCGGAC +
Preference number: 4 (lower is better)
Translates to: KHHQSFQHPPSKSECLESLHYLL*AVCYSD
Trigger: GTCCGAATAACAGACAGCCCAGAGGAGATAGTGCAG...AGACTCTAAACATTCTGATTTTGAAGGTGGGTGTTGGAACGACTGATGATGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR CCA 90 bp TTTAGGAAAGCTGCCGTTATCAGAATGCATGGAGTGCAAGGCACAAAAGCCTTGATCGTACAAGCTAATTaGATTCTCTCAGCCTCACTT +
Preference number: 4 (lower is better)
Translates to: FRKAAVIRMHGVQGTKALIVQAN*ILSASL
Trigger: AAGTGAGGCTGAGAGAATCCAATTAGCTTGTACGAT...CAAGGCTTTTGTGCCTTGCACTCCATGCATTCTGATAACGGCAGCTTTCCTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR CCA 90 bp GTTATTCGGACGGTGGCCAGTTTGTCAGGGTCTGATTTCGACATTTTGGCAGAAACTGCTATTGTAGACTaGCAGAACCTATTTCAAAGT +
Preference number: 4 (lower is better)
Translates to: VIRTVASLSGSDFDILAETAIVD*QNLFQS
Trigger: ACTTTGAAATAGGTTCTGCCAGTCTACAATAGCAGT...TTCTGCCAAAATGTCGAAATCAGACCCTGACAAACTGGCCACCGTCCGAATAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369426.9
CDS-3UTR TCA 90 bp TCTGATTTGTCAGTCTTCACTGCTATTGTAGACTGGCAGAACCTATTTCAAAGTAGGATTCCTGTAGGTTaGATGCCGGAAAATACTCGC +
Preference number: 4 (lower is better)
Translates to: SDLSVFTAIVDWQNLFQSRIPVG*MPENTR
Trigger: GCGAGTATTTTCCGGCATTCAACCTACAGGAATCCT...ACTTTGAAATAGGTTCTGCCAGTCTACAATAGCAGTGAAGACTGACAAATCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR TCA 90 bp GGATGGGGCGTTTTGTGGATTAACATGTGTTCTGACACAAGGACTACTCTACTTATACAAATTGGCATCTaGTCAAATGGCATCTCAAGG +
Preference number: 4 (lower is better)
Translates to: GWGVLWINMCSDTRTTLLIQIGI*SNGISR
Trigger: CCTTGAGATGCCATTTGATCAGATGCCAATTTGTAT...AAGTAGAGTAGTCCTTGTGTCAGAACACATGTTAATCCACAAAACGCCCCATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR TCA 90 bp TCCTATAGAAAACCCACCAATTTCTTCACCTCCTGGCACACAGTGTATGCTAATGTCATTGGGAATATCTaGTTTGTCAGTCTTCACTGC +
Preference number: 4 (lower is better)
Translates to: SYRKPTNFFTSWHTVYANVIGNI*FVSLHC
Trigger: GCAGTGAAGACTGACAAATCAGATATTCCCAATGAC...ATTAGCATACACTGTGTGCCAGGAGGTGAAGAAATTGGTGGGTTTTCTATAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369426.9
CDS-3UTR GCA 90 bp CTGATCCAATTTGTAAAACCTTCTCTAAATGGTCCTTGTCCAGCTTCAGTTTTTGCAGGCCAAGGAGTGTaGCTCAATAATTGGGGATTC +
Preference number: 4 (lower is better)
Translates to: LIQFVKPSLNGPCPASVFAGQGV*LNNWGF
Trigger: GAATCCCCAATTATTGAGGCACACTCCTTGGCCTGC...AAAAACTGAAGCTGGACAAGGACCATTTAGAGAAGGTTTTACAAATTGGATCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369426.9
CDS-3UTR CCA 90 bp AAAAGGGTTGAAGTAGATAACGTGTGCATCTGTTACAGTAAGTACTCCAGAGAGCTGATTTCGACATTTTaGCAGAAGGATCACGTAGGG +
Preference number: 4 (lower is better)
Translates to: KRVEVDNVCICYSKYSRELISTF*QKDHVG
Trigger: CCCTACGTGATCCTTCTGCCAAAATGTCGAAATCAG...CTCTCTGGAGTACTTACTGTAACAGATGCACACGTTATCTACTTCAACCCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR CCA 90 bp TTTAGGAAAGCTGCCGTTATCAGAATGCATGGAGTGCAAGGCACAAAAGCCTTGAATTTCACGCTTAATTaGGGCAAACTTCTCAATCAC +
Preference number: 4 (lower is better)
Translates to: FRKAAVIRMHGVQGTKALNFTLN*GKLLNH
Trigger: GTGATTGAGAAGTTTGCCCCAATTAAGCGTGAAATT...CAAGGCTTTTGTGCCTTGCACTCCATGCATTCTGATAACGGCAGCTTTCCTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR CCA 90 bp TCTTATGGAGTGATATCGTACAAGCTAATTGGATTCTCTCAGCCTCACTTTCCTGTGTGCCTCAATAATTaGGGATTCAGACAGCTATGC +
Preference number: 4 (lower is better)
Translates to: SYGVISYKLIGFSQPHFPVCLNN*GFRQLC
Trigger: GCATAGCTGTCTGAATCCCCAATTATTGAGGCACAC...AGGAAAGTGAGGCTGAGAGAATCCAATTAGCTTGTACGATATCACTCCATAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR CCA 90 bp ATTTCAAAGTATTTCTGCAATGAGCGTAGAGGAGAGAACTTGGGACCCGCCTTGGCTCTGAATACAAATTaGCATCTGATCAAATGGCAT +
Preference number: 4 (lower is better)
Translates to: ISKYFCNERRGENLGPALALNTN*HLIKWH
Trigger: ATGCCATTTGATCAGATGCCAATTTGTATTCAGAGC...CAAGGCGGGTCCCAAGTTCTCTCCTCTACGCTCATTGCAGAAATACTTTGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR CCA 90 bp GGATGGGGCGTTTTGTGGATTAACATGTGTTCTGACACAAGGACTACTCTACTTATCGTACAAGCTAATTaGATTCTCTCAGCCTCACTT +
Preference number: 4 (lower is better)
Translates to: GWGVLWINMCSDTRTTLLIVQAN*ILSASL
Trigger: AAGTGAGGCTGAGAGAATCCAATTAGCTTGTACGAT...AAGTAGAGTAGTCCTTGTGTCAGAACACATGTTAATCCACAAAACGCCCCATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR CCA 90 bp TTCTTTTTAGGAAAGCTGCCGTTATCAGAATGCATGGAGTGCAAGGCACAAAAGATTTGGAATCTGGGATaGGGCGTTTTGTGGATTAAC +
Preference number: 4 (lower is better)
Translates to: FFLGKLPLSECMECKAQKIWNLG*GVLWIN
Trigger: GTTAATCCACAAAACGCCCCATCCCAGATTCCAAAT...CTTTTGTGCCTTGCACTCCATGCATTCTGATAACGGCAGCTTTCCTAAAAAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
3UTR CAA 72 bp ATGGAGTGCAAGGCACAAAAGCCTTGCTGTGATTCGTaGAAACTTCCTATAGAAAACCCACCAATTTCTTCA +
Preference number: 4 (lower is better)
Translates to: MECKAQKPCCDS*KLPIENPPISS
Trigger: TGAAGAAATTGGTGGGTTTTCTATAGGAAGTTTCAACGAATCACAGCAAGGCTTTTGTGCCTTGCACTCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369426.9
CDS-3UTR TCA 90 bp GTACTGAATAAACAAGCACTATTCTTAAGAATAAGGGGTAAGGGTTTTACTCTCCCTTGTGCTAGATCCTaGACTAGTTCCATGTGCTGG +
Preference number: 4 (lower is better)
Translates to: VLNKQALFLRIRGKGFTLPCARS*TSSMCW
Trigger: CCAGCACATGGAACTAGTTCAGGATCTAGCACAAGG...GAGAGTAAAACCCTTACCCCTTATTCTTAAGAATAGTGCTTGTTTATTCAGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR TCA 90 bp TTCTTTTTAGGAAAGCTGCCGTTATCAGAATGCATGGAGTGCAAGGCACAAAAGATACAAATTGGCATCTaGTCAAATGGCATCTCAAGG +
Preference number: 4 (lower is better)
Translates to: FFLGKLPLSECMECKAQKIQIGI*SNGISR
Trigger: CCTTGAGATGCCATTTGATCAGATGCCAATTTGTAT...CTTTTGTGCCTTGCACTCCATGCATTCTGATAACGGCAGCTTTCCTAAAAAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR TCA 90 bp TCTTATGGAGTGATATCGTACAAGCTAATTGGATTCTCTCAGCCTCACTTTCCTCAGGCACCGTCTCAGTaGCAAACAAACTATAAGAAT +
Preference number: 4 (lower is better)
Translates to: SYGVISYKLIGFSQPHFPQAPSQ*QTNYKN
Trigger: ATTCTTATAGTTTGTTTGTCACTGAGACGGTGCCTG...AGGAAAGTGAGGCTGAGAGAATCCAATTAGCTTGTACGATATCACTCCATAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR CCA 90 bp GGATGGGGCGTTTTGTGGATTAACATGTGTTCTGACACAAGGACTACTCTACTTAATTTCACGCTTAATTaGGGCAAACTTCTCAATCAC +
Preference number: 4 (lower is better)
Translates to: GWGVLWINMCSDTRTTLLNFTLN*GKLLNH
Trigger: GTGATTGAGAAGTTTGCCCCAATTAAGCGTGAAATT...AAGTAGAGTAGTCCTTGTGTCAGAACACATGTTAATCCACAAAACGCCCCATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR CCA 90 bp AGAAAACCCACCAATTTCTTCACCTCCTGGCACACAGTGTATGCTAATTCTTTGAATTTCTTCACCTCCTaGCACACAGTGTATGCTAAT +
Preference number: 4 (lower is better)
Translates to: RKPTNFFTSWHTVYANSLNFFTS*HTVYAN
Trigger: ATTAGCATACACTGTGTGCCAGGAGGTGAAGAAATT...CAAAGAATTAGCATACACTGTGTGCCAGGAGGTGAAGAAATTGGTGGGTTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369426.9
CDS-3UTR CCA 90 bp CTGGGATGGGGCGTTTTGTGGATTAACATGTGTTCTGACACAAGGACTACTCTATTTGTTGATGGGATTTaGAACACTGTCGTATTTCAA +
Preference number: 4 (lower is better)
Translates to: LGWGVLWINMCSDTRTTLFVDGI*NTVVFQ
Trigger: TTGAAATACGACAGTGTTCCAAATCCCATCAACAAA...TAGAGTAGTCCTTGTGTCAGAACACATGTTAATCCACAAAACGCCCCATCCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR TCA 90 bp TATAACTTTTTCTTTTTAGGAAAGCTGCCGTTATCAGAATGCATGGAGTGCAAGGTGTGTTCAGACACCTaGGATTGTTGGAAAAGGATG +
Preference number: 4 (lower is better)
Translates to: YNFFFLGKLPLSECMECKVCSDT*DCWKRM
Trigger: CATCCTTTTCCAACAATCTCAGGTGTCTGAACACAC...CTTGCACTCCATGCATTCTGATAACGGCAGCTTTCCTAAAAAGAAAAAGTTATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR TCA 90 bp TATAACTTTTTCTTTTTAGGAAAGCTGCCGTTATCAGAATGCATGGAGTGCAAGCAGTTTGTCAGGGTCTaGTTTCGACATTTTGGCAGA +
Preference number: 4 (lower is better)
Translates to: YNFFFLGKLPLSECMECKQFVRV*FRHFGR
Trigger: TCTGCCAAAATGTCGAAATCAGACCCTGACAAACTG...CTTGCACTCCATGCATTCTGATAACGGCAGCTTTCCTAAAAAGAAAAAGTTATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR TCA 90 bp AATACAAATTGGCATCTGATCAAATGGCATCTCAAGGATTATACATCTAAGACCTTTGATGGGGAAATGTaGCCACGGTTCTGTGAATCC +
Preference number: 4 (lower is better)
Translates to: NTNWHLIKWHLKDYTSKTFDGEM*PRFCES
Trigger: GGATTCACAGAACCGTGGTCACATTTCCCCATCAAA...GGTCTTAGATGTATAATCCTTGAGATGCCATTTGATCAGATGCCAATTTGTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR GCA 90 bp ATGAGCTCTGAATACAAATTGGCATCTGATCAAATGGCATCTCAAGGATTATACAAAATACTCGCTTCTTaGTGTCTTTCTGGAGAGCGG +
Preference number: 4 (lower is better)
Translates to: MSSEYKLASDQMASQGLYKILAS*CLSGER
Trigger: CCGCTCTCCAGAAAGACAGCAAGAAGCGAGTATTTT...GTATAATCCTTGAGATGCCATTTGATCAGATGCCAATTTGTATTCAGAGCTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR GCA 90 bp TTGGGAATATCTGATTTGTCAGTCTTCACTGCTATTGTAGACTGGCAGAACCTATTTGTCAGTCTTCACTaGTATTGTAGACTGGCAGAA +
Preference number: 4 (lower is better)
Translates to: LGISDLSVFTAIVDWQNLFVSLH*YCRLAE
Trigger: TTCTGCCAGTCTACAATAGCAGTGAAGACTGACAAA...TAGGTTCTGCCAGTCTACAATAGCAGTGAAGACTGACAAATCAGATATTCCCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR CCA 90 bp AAAAGGGTTGAAGTAGATAACGTGTGCATCTGTTACAGTAAGTACTCCAGAGAGAATTTCTTCACCTCCTaGCACACAGTGTATGCTAAT +
Preference number: 4 (lower is better)
Translates to: KRVEVDNVCICYSKYSRENFFTS*HTVYAN
Trigger: ATTAGCATACACTGTGTGCCAGGAGGTGAAGAAATT...CTCTCTGGAGTACTTACTGTAACAGATGCACACGTTATCTACTTCAACCCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR CCA 90 bp TCTTATGGAGTGATATCGTACAAGCTAATTGGATTCTCTCAGCCTCACTTTCCTAACGATGTTTTAATTTaGAATCTGGGATGGGGCGTT +
Preference number: 4 (lower is better)
Translates to: SYGVISYKLIGFSQPHFPNDVLI*NLGWGV
Trigger: AACGCCCCATCCCAGATTCCAAATTAAAACATCGTT...AGGAAAGTGAGGCTGAGAGAATCCAATTAGCTTGTACGATATCACTCCATAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
3UTR CAA 72 bp AACGATGTTTTAATTTGGAATCTGGGATGGGGCGTTTaGTGGATTAACATGTGTTCTGACACAAGGACTACT +
Preference number: 4 (lower is better)
Translates to: NDVLIWNLGWGV*WINMCSDTRTT
Trigger: AGTAGTCCTTGTGTCAGAACACATGTTAATCCACAAAACGCCCCATCCCAGATTCCAAATTAAAACATCGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR TCA 90 bp TATAACTTTTTCTTTTTAGGAAAGCTGCCGTTATCAGAATGCATGGAGTGCAAGCAGGCACCGTCTCAGTaGCAAACAAACTATAAGAAT +
Preference number: 4 (lower is better)
Translates to: YNFFFLGKLPLSECMECKQAPSQ*QTNYKN
Trigger: ATTCTTATAGTTTGTTTGTCACTGAGACGGTGCCTG...CTTGCACTCCATGCATTCTGATAACGGCAGCTTTCCTAAAAAGAAAAAGTTATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR TCA 90 bp AAAAGGGTTGAAGTAGATAACGTGTGCATCTGTTACAGTAAGTACTCCAGAGAGTTGGTGAGACTAAACTaGAATGAATGCAAGAAAGCA +
Preference number: 4 (lower is better)
Translates to: KRVEVDNVCICYSKYSRELVRLN*NECKKA
Trigger: TGCTTTCTTGCATTCATTTCAGTTTAGTCTCACCAA...CTCTCTGGAGTACTTACTGTAACAGATGCACACGTTATCTACTTCAACCCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR TCA 90 bp TTTATGAGCTCTGAATACAAATTGGCATCTGATCAAATGGCATCTCAAGGATTAGTGACCACGGTTCTGTaGATCCAGATTTTAAGTTCG +
Preference number: 4 (lower is better)
Translates to: FMSSEYKLASDQMASQGLVTTVL*IQILSS
Trigger: CGAACTTAAAATCTGGATTCACAGAACCGTGGTCAC...TAATCCTTGAGATGCCATTTGATCAGATGCCAATTTGTATTCAGAGCTCATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR GCA 90 bp TTGGGAATATCTGATTTGTCAGTCTTCACTGCTATTGTAGACTGGCAGAACCTAAGTGGAGGTCAACAATaGTGTATAATACAGAGTCAT +
Preference number: 4 (lower is better)
Translates to: LGISDLSVFTAIVDWQNLSGGQQ*CIIQSH
Trigger: ATGACTCTGTATTATACAGCATTGTTGACCTCCACT...TAGGTTCTGCCAGTCTACAATAGCAGTGAAGACTGACAAATCAGATATTCCCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR GCA 90 bp TCTTATGGAGTGATATCGTACAAGCTAATTGGATTCTCTCAGCCTCACTTTCCTATTTCAAAGTATTTCTaGAATGAGCGTAGAGGAGAG +
Preference number: 4 (lower is better)
Translates to: SYGVISYKLIGFSQPHFPISKYF*NERRGE
Trigger: CTCTCCTCTACGCTCATTGCAGAAATACTTTGAAAT...AGGAAAGTGAGGCTGAGAGAATCCAATTAGCTTGTACGATATCACTCCATAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR CCA 90 bp TATAACTTTTTCTTTTTAGGAAAGCTGCCGTTATCAGAATGCATGGAGTGCAAGATTTGGAATCTGGGATaGGGCGTTTTGTGGATTAAC +
Preference number: 4 (lower is better)
Translates to: YNFFFLGKLPLSECMECKIWNLG*GVLWIN
Trigger: GTTAATCCACAAAACGCCCCATCCCAGATTCCAAAT...CTTGCACTCCATGCATTCTGATAACGGCAGCTTTCCTAAAAAGAAAAAGTTATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR CCA 90 bp TCTGATTTGTCAGTCTTCACTGCTATTGTAGACTGGCAGAACCTATTTCAAAGTTGGCATCTGATCAAATaGCATCTCAAGGATTATACA +
Preference number: 4 (lower is better)
Translates to: SDLSVFTAIVDWQNLFQSWHLIK*HLKDYT
Trigger: TGTATAATCCTTGAGATGCCATTTGATCAGATGCCA...ACTTTGAAATAGGTTCTGCCAGTCTACAATAGCAGTGAAGACTGACAAATCAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR TCA 90 bp TTTATGAGCTCTGAATACAAATTGGCATCTGATCAAATGGCATCTCAAGGATTAACAAAAGCCTTGCTGTaGTTCGTTGAAACTTCCTAT +
Preference number: 4 (lower is better)
Translates to: FMSSEYKLASDQMASQGLTKALL*FVETSY
Trigger: ATAGGAAGTTTCAACGAATCACAGCAAGGCTTTTGT...TAATCCTTGAGATGCCATTTGATCAGATGCCAATTTGTATTCAGAGCTCATAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR GCA 90 bp GATGGGATTTGGAACACTGTCGTATTTCAAAGCTACAAAGCAATATTCATCAAAAAGGCACAAAAGCCTTaGTGTGATTCGTTGAAACTT +
Preference number: 4 (lower is better)
Translates to: DGIWNTVVFQSYKAIFIKKAQKP*CDSLKL
Trigger: AAGTTTCAACGAATCACAGCAAGGCTTTTGTGCCTT...TTTGATGAATATTGCTTTGTAGCTTTGAAATACGACAGTGTTCCAAATCCCATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR GCA 90 bp CTGATCCAATTTGTAAAACCTTCTCTAAATGGTCCTTGTCCAGCTTCAGTTTTTGAAGTAGATAACGTGTaGATCTGTTACAGTAAGTAC +
Preference number: 4 (lower is better)
Translates to: LIQFVKPSLNGPCPASVFEVDNV*ICYSKY
Trigger: GTACTTACTGTAACAGATGCACACGTTATCTACTTC...AAAAACTGAAGCTGGACAAGGACCATTTAGAGAAGGTTTTACAAATTGGATCAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369426.9
CDS-3UTR GCA 90 bp ATGAGCTCTGAATACAAATTGGCATCTGATCAAATGGCATCTCAAGGATTATACATTTCAAAGTATTTCTaGAATGAGCGTAGAGGAGAG +
Preference number: 4 (lower is better)
Translates to: MSSEYKLASDQMASQGLYISKYF*NERRGE
Trigger: CTCTCCTCTACGCTCATTGCAGAAATACTTTGAAAT...GTATAATCCTTGAGATGCCATTTGATCAGATGCCAATTTGTATTCAGAGCTCAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR CCA 90 bp TTTATGAGCTCTGAATACAAATTGGCATCTGATCAAATGGCATCTCAAGGATTAAAAACCTTCTCTAAATaGTCCTTGTCCAGCTTCAGT +
Preference number: 4 (lower is better)
Translates to: FMSSEYKLASDQMASQGLKTFSK*SLSSFS
Trigger: ACTGAAGCTGGACAAGGACCATTTAGAGAAGGTTTT...TAATCCTTGAGATGCCATTTGATCAGATGCCAATTTGTATTCAGAGCTCATAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR CCA 90 bp ATGAGCTCTGAATACAAATTGGCATCTGATCAAATGGCATCTCAAGGATTATACACTGCTATTGTAGACTaGCAGAACCTATTTCAAAGT +
Preference number: 4 (lower is better)
Translates to: MSSEYKLASDQMASQGLYTAIVD*QNLFQS
Trigger: ACTTTGAAATAGGTTCTGCCAGTCTACAATAGCAGT...GTATAATCCTTGAGATGCCATTTGATCAGATGCCAATTTGTATTCAGAGCTCAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR TCA 90 bp GATGGGATTTGGAACACTGTCGTATTTCAAAGCTACAAAGCAATATTCATCAAATTGGTGAGACTAAACTaGAATGAATGCAAGAAAGCA +
Preference number: 4 (lower is better)
Translates to: DGIWNTVVFQSYKAIFIKLVRLN*NECKKA
Trigger: TGCTTTCTTGCATTCATTTCAGTTTAGTCTCACCAA...TTTGATGAATATTGCTTTGTAGCTTTGAAATACGACAGTGTTCCAAATCCCATC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR CCA 90 bp TTTATGAGCTCTGAATACAAATTGGCATCTGATCAAATGGCATCTCAAGGATTATGGCATCTGATCAAATaGCATCTCAAGGATTATACA +
Preference number: 4 (lower is better)
Translates to: FMSSEYKLASDQMASQGLWHLIK*HLKDYT
Trigger: TGTATAATCCTTGAGATGCCATTTGATCAGATGCCA...TAATCCTTGAGATGCCATTTGATCAGATGCCAATTTGTATTCAGAGCTCATAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR CCA 90 bp AATACAAATTGGCATCTGATCAAATGGCATCTCAAGGATTATACATCTAAGACCGCTCTGAATACAAATTaGCATCTGATCAAATGGCAT +
Preference number: 4 (lower is better)
Translates to: NTNWHLIKWHLKDYTSKTALNTN*HLIKWH
Trigger: ATGCCATTTGATCAGATGCCAATTTGTATTCAGAGC...GGTCTTAGATGTATAATCCTTGAGATGCCATTTGATCAGATGCCAATTTGTATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR CAA 90 bp GCCCGCGCTGCGGCGCACCACTTCCTCCACGGAGAGCCCCGTCACCGCGGCATGCGTAGAGGAGAGAACTaGGGACCCGCCTTGGGGATT +
Preference number: 5 (lower is better)
Translates to: ARAAAHHFLHGEPRHRGMRRGEN*GPALGI
Trigger: AATCCCCAAGGCGGGTCCCAAGTTCTCTCCTCTACG...CATGCCGCGGTGACGGGGCTCTCCGTGGAGGAAGTGGTGCGCCGCAGCGCGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369426.9
CDS CCA 90 bp TCACCGCGTTGCCCGGCAACAGCGGCGGCGCTCCGCTCCCAGAACTaGAGGTGGCGGCAAGAGGTCAGAAAGCGGCGCGCTTTTTCCACC +
Preference number: 5 (lower is better)
Translates to: SPRCPATAAALRSQN*RWRQEVRKRRAFST
Trigger: GGTGGAAAAAGCGCGCCGCTTTCTGACCTCTTGCCGCCACCTCCAGTTCTGGGAGCGGAGCGCCGCCGCTGTTGCCGGGCAACGCGGTGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497761.1
CDS GCA 90 bp CAACCCGTCTCTGAAAACATCACACGCGGGGTAGGCTCACCGCGTTaGCCGGCAACAGCGGCGGCGCTCCGCTCCCAGAACTGGAGGTGG +
Preference number: 5 (lower is better)
Translates to: QPVSENITRGVGSPR*PATAAALRSQNWRW
Trigger: CCACCTCCAGTTCTGGGAGCGGAGCGCCGCCGCTGTTGCCGGGCAACGCGGTGAGCCTACCCCGCGTGTGATGTTTTCAGAGACGGGTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497761.1
CDS TCA 90 bp TCTGGAGAGCGGGAGCAGCTGCGGATCCCTTATGAAGTGCCCGGATaGAGCTCCAGCGCTCACGCGCTTTCCGCATTGAGTGCAGCGCCA +
Preference number: 5 (lower is better)
Translates to: SGEREQLRIPYEVPG*SSSAHALSALSAAP
Trigger: TGGCGCTGCACTCAATGCGGAAAGCGCGTGAGCGCTGGAGCTTCATCCGGGCACTTCATAAGGGATCCGCAGCTGCTCCCGCTCTCCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000235521.5
ENST00000369426.9
ENST00000495746.5
CDS-3UTR CAA 90 bp GGCGCACCACTTCCTCCACGGAGAGCCCCGTCACCGCGGCATGCACCGCCACTAGAAAATACTCGCTTCTaGCTGTCTTTCTGGAGAGCG +
Preference number: 5 (lower is better)
Translates to: GAPLPPRRAPSPRHAPPLENTRF*LSFWRA
Trigger: CGCTCTCCAGAAAGACAGCAAGAAGCGAGTATTTTC...TAGTGGCGGTGCATGCCGCGGTGACGGGGCTCTCCGTGGAGGAAGTGGTGCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369426.9
CDS TCA 90 bp GGCATGTACTTTCCCTGGAGAGCGGGAGCAGCTGCGGATCCCTTATaGAGTGCCCGGATGAAGCTCCAGCGCTCACGCGCTTTCCGCATT +
Preference number: 5 (lower is better)
Translates to: GMYFPWRAGAAADPL*SARMKLQRSRAFRI
Trigger: AATGCGGAAAGCGCGTGAGCGCTGGAGCTTCATCCGGGCACTTCATAAGGGATCCGCAGCTGCTCCCGCTCTCCAGGGAAAGTACATGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497761.1
CDS TCA 90 bp GCAGTGCTGTGGAGCCACCAGGAGCAACCAGAATGGAAGATGCACTaGCACTTGCTCAAGTACCACACTGCCAACCTGCTGCCCCGACCC +
Preference number: 5 (lower is better)
Translates to: AVLWSHQEQPEWKMH*HLLKYHTANLLPRP
Trigger: GGGTCGGGGCAGCAGGTTGGCAGTGTGGTACTTGAGCAAGTGTCAGTGCATCTTCCATTCTGGTTGCTCCTGGTGGCTCCACAGCACTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497761.1
CDS TCA 90 bp TTCTTGCTGTCTTTCTGGAGAGCGGGAGCAGCTGCGGATCCCTTATaGAGTGCCCGGATGAAGCTCCAGCGCTCACGCGCTTTCCGCATT +
Preference number: 5 (lower is better)
Translates to: FLLSFWRAGAAADPL*SARMKLQRSRAFRI
Trigger: AATGCGGAAAGCGCGTGAGCGCTGGAGCTTCATCCGGGCACTTCATAAGGGATCCGCAGCTGCTCCCGCTCTCCAGAAAGACAGCAAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000235521.5
ENST00000369426.9
ENST00000495746.5
CDS GCA 90 bp TGTGGAGCCACCAGGAGCAACCAGAATGGAAGATGCACTGACACTTaGTCAAGTACCACACTGCCAACCTGCTGCCCCGACCCAAGCTGC +
Preference number: 5 (lower is better)
Translates to: CGATRSNQNGRCTDT*SSTTLPTCCPDPSC
Trigger: GCAGCTTGGGTCGGGGCAGCAGGTTGGCAGTGTGGTACTTGAGCAAGTGTCAGTGCATCTTCCATTCTGGTTGCTCCTGGTGGCTCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497761.1
CDS-3UTR CAA 90 bp GGCGCACCACTTCCTCCACGGAGAGCCCCGTCACCGCGGCATGCACCGCCACTAATGAGCAAAAATGCTTaGCTCAACAACCTAGTTATG +
Preference number: 5 (lower is better)
Translates to: GAPLPPRRAPSPRHAPPLMSKNA*LNNLVM
Trigger: CATAACTAGGTTGTTGAGCAAAGCATTTTTGCTCAT...TAGTGGCGGTGCATGCCGCGGTGACGGGGCTCTCCGTGGAGGAAGTGGTGCGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369426.9
CDS GCA 90 bp ATAGAGCAGTGCTGTGGAGCCACCAGGAGCAACCAGAATGGAAGATaGACTGACACTTGCTCAAGTACCACACTGCCAACCTGCTGCCCC +
Preference number: 5 (lower is better)
Translates to: IEQCCGATRSNQNGR*TDTCSSTTLPTCCP
Trigger: GGGGCAGCAGGTTGGCAGTGTGGTACTTGAGCAAGTGTCAGTGCATCTTCCATTCTGGTTGCTCCTGGTGGCTCCACAGCACTGCTCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497761.1
CDS CCA 90 bp AACGTGTGTGGACTTGTACAACAGAATGTCGGCTGCCTGGAGTACTaGGTATGTGAGCAGGCCCACCGTGCCATCGTGCTTCTGCTTGGT +
Preference number: 5 (lower is better)
Translates to: NVCGLVQQNVGCLEY*VCEQAHRAIVLLLG
Trigger: ACCAAGCAGAAGCACGATGGCACGGTGGGCCTGCTCACATACCCAGTACTCCAGGCAGCCGACATTCTGTTGTACAAGTCCACACACGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000235521.5
ENST00000369426.9
ENST00000497402.1
CDS GCA 90 bp TTTATGCCACAGGCAAGAAGAACAGCAGTCATGTCCAGGATGCTCTaGCGAAGGACAGCTGGGTCTTGGGGGACAGTAATGGAGTGGAGG +
Preference number: 5 (lower is better)
Translates to: FMPQARRTAVMSRML*RRTAGSWGTVMEWR
Trigger: CCTCCACTCCATTACTGTCCCCCAAGACCCAGCTGTCCTTCGGCAGAGCATCCTGGACATGACTGCTGTTCTTCTTGCCTGTGGCATAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000235521.5
ENST00000369426.9
ENST00000495746.5
ENST00000497402.1
CDS-3UTR CAA 90 bp ATTTCAAAGTATTTCTGCAATGAGCGTAGAGGAGAGAACTTGGGACCCGCCTTGTGCACCGCCACTATGTaGGACACGCCAGCGCGGCCA +
Preference number: 5 (lower is better)
Translates to: ISKYFCNERRGENLGPALCTATM*DTPARP
Trigger: TGGCCGCGCTGGCGTGTCCAACATAGTGGCGGTGCA...CAAGGCGGGTCCCAAGTTCTCTCCTCTACGCTCATTGCAGAAATACTTTGAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR CAA 90 bp AAGCTGCCGTTATCAGAATGCATGGAGTGCAAGGCACAAAAGCCTTGCTGTGATCGTAGAGGAGAGAACTaGGGACCCGCCTTGGGGATT +
Preference number: 5 (lower is better)
Translates to: KLPLSECMECKAQKPCCDRRGEN*GPALGI
Trigger: AATCCCCAAGGCGGGTCCCAAGTTCTCTCCTCTACG...ATCACAGCAAGGCTTTTGTGCCTTGCACTCCATGCATTCTGATAACGGCAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS GCA 90 bp AATGGAAGATGCACTGACACTTGCTCAAGTACCACACTGCCAACCTaGTGCCCCGACCCAAGCTGCCCAATGCCTAACAAAACTTCTCTA +
Preference number: 5 (lower is better)
Translates to: NGRCTDTCSSTTLPT*CPDPSCPMPNKTSL
Trigger: TAGAGAAGTTTTGTTAGGCATTGGGCAGCTTGGGTCGGGGCAGCAGGTTGGCAGTGTGGTACTTGAGCAAGTGTCAGTGCATCTTCCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497761.1
CDS CCA 90 bp ACAGCAGTCATGTCCAGGATGCTCTGCCGAAGGACAGCTGGGTCTTaGGGGACAGTAATGGAGTGGAGGTCAACAATGCTGTATAATACA +
Preference number: 5 (lower is better)
Translates to: TAVMSRMLCRRTAGS*GTVMEWRSTMLYNT
Trigger: TGTATTATACAGCATTGTTGACCTCCACTCCATTACTGTCCCCCAAGACCCAGCTGTCCTTCGGCAGAGCATCCTGGACATGACTGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000235521.5
ENST00000369426.9
ENST00000495746.5
ENST00000497402.1
CDS-3UTR CAA 90 bp AGTATTTCTGCAATGAGCGTAGAGGAGAGAACTTGGGACCCGCCTTGGGGATTTGGAACGTGTGTGGACTaGTACAACAGAATGTCGGCT +
Preference number: 5 (lower is better)
Translates to: SISAMSVEERTWDPPWGFGTCVD*YNRMSA
Trigger: AGCCGACATTCTGTTGTACAAGTCCACACACGTTCC...AAATCCCCAAGGCGGGTCCCAAGTTCTCTCCTCTACGCTCATTGCAGAAATACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR CAA 90 bp AAACATCATCAGTCGTTCCAACACCCACCTTCAAAATCAGAATGTTTAGAGTCTTGCACCGCCACTATGTaGGACACGCCAGCGCGGCCA +
Preference number: 5 (lower is better)
Translates to: KHHQSFQHPPSKSECLESCTATM*DTPARP
Trigger: TGGCCGCGCTGGCGTGTCCAACATAGTGGCGGTGCA...AGACTCTAAACATTCTGATTTTGAAGGTGGGTGTTGGAACGACTGATGATGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR CAA 90 bp AGGAAAGCTGCCGTTATCAGAATGCATGGAGTGCAAGGCACAAAAGCCTTGCTGGAAAATACTCGCTTCTaGCTGTCTTTCTGGAGAGCG +
Preference number: 5 (lower is better)
Translates to: RKAAVIRMHGVQGTKALLENTRF*LSFWRA
Trigger: CGCTCTCCAGAAAGACAGCAAGAAGCGAGTATTTTC...CAGCAAGGCTTTTGTGCCTTGCACTCCATGCATTCTGATAACGGCAGCTTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR CAA 90 bp TGGGATGGGGCGTTTTGTGGATTAACATGTGTTCTGACACAAGGACTACTCTACTTCCATGTGCTGGACTaGATCCTCCCCAACAGGAAC +
Preference number: 5 (lower is better)
Translates to: WDGAFCGLTCVLTQGLLYFHVLD*ILPNRN
Trigger: GTTCCTGTTGGGGAGGATCAAGTCCAGCACATGGAA...GTAGAGTAGTCCTTGTGTCAGAACACATGTTAATCCACAAAACGCCCCATCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS CCA 90 bp ATGCTCTGCCGAAGGACAGCTGGGTCTTGGGGGACAGTAATGGAGTaGAGGTCAACAATGCTGTATAATACAGAGTCATATTCATCCTGT +
Preference number: 5 (lower is better)
Translates to: MLCRRTAGSWGTVME*RSTMLYNTESYSSC
Trigger: ACAGGATGAATATGACTCTGTATTATACAGCATTGTTGACCTCCACTCCATTACTGTCCCCCAAGACCCAGCTGTCCTTCGGCAGAGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000235521.5
ENST00000369426.9
ENST00000495746.5
ENST00000497402.1
CDS-3UTR CAA 90 bp CAAATTACTCCTTACTTCAATCACATTTCTGCAGGCCAAGGAGTGTGCCTCAATAAGGACAGCTGGGTCTaGGGGGACAGTAATGGAGTG +
Preference number: 5 (lower is better)
Translates to: QITPYFNHISAGQGVCLNKDSWV*GDSNGV
Trigger: CACTCCATTACTGTCCCCCAAGACCCAGCTGTCCTT...ATTGAGGCACACTCCTTGGCCTGCAGAAATGTGATTGAAGTAAGGAGTAATTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR CAA 90 bp ATTTCAAAGTATTTCTGCAATGAGCGTAGAGGAGAGAACTTGGGACCCGCCTTGGGAACGTGTGTGGACTaGTACAACAGAATGTCGGCT +
Preference number: 5 (lower is better)
Translates to: ISKYFCNERRGENLGPALGTCVD*YNRMSA
Trigger: AGCCGACATTCTGTTGTACAAGTCCACACACGTTCC...CAAGGCGGGTCCCAAGTTCTCTCCTCTACGCTCATTGCAGAAATACTTTGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR CAA 90 bp AAGCTGCCGTTATCAGAATGCATGGAGTGCAAGGCACAAAAGCCTTGCTGTGATCTGGGATGGGGCGTTTaGTGGATTAACATGTGTTCT +
Preference number: 5 (lower is better)
Translates to: KLPLSECMECKAQKPCCDLGWGV*WINMCS
Trigger: AGAACACATGTTAATCCACAAAACGCCCCATCCCAG...ATCACAGCAAGGCTTTTGTGCCTTGCACTCCATGCATTCTGATAACGGCAGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS CCA 90 bp TTATTCGGACGGTGGCCAGTTTGTCAGGGTCTGATTTCGACATTTTaGCAGAAGGATCACGTAGGGATTTTACCTTCTTCATGGATGCTA +
Preference number: 5 (lower is better)
Translates to: LFGRWPVCQGLISTF*QKDHVGILPSSWML
Trigger: TAGCATCCATGAAGAAGGTAAAATCCCTACGTGATCCTTCTGCCAAAATGTCGAAATCAGACCCTGACAAACTGGCCACCGTCCGAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369426.9
CDS-3UTR CAA 90 bp AGTATTTCTGCAATGAGCGTAGAGGAGAGAACTTGGGACCCGCCTTGGGGATTTGTTACAAAATCGATCTaGCTAACAGGTCTTGGTGTA +
Preference number: 5 (lower is better)
Translates to: SISAMSVEERTWDPPWGFVTKSI*LTGLGV
Trigger: TACACCAAGACCTGTTAGCAAGATCGATTTTGTAAC...AAATCCCCAAGGCGGGTCCCAAGTTCTCTCCTCTACGCTCATTGCAGAAATACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR CAA 90 bp AAACATCATCAGTCGTTCCAACACCCACCTTCAAAATCAGAATGTTTAGAGTCTTTCCATGTGCTGGACTaGATCCTCCCCAACAGGAAC +
Preference number: 5 (lower is better)
Translates to: KHHQSFQHPPSKSECLESFHVLD*ILPNRN
Trigger: GTTCCTGTTGGGGAGGATCAAGTCCAGCACATGGAA...AGACTCTAAACATTCTGATTTTGAAGGTGGGTGTTGGAACGACTGATGATGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR CAA 90 bp ATTTCAAAGTATTTCTGCAATGAGCGTAGAGGAGAGAACTTGGGACCCGCCTTGGTTCACAGCATTTTGTaGATGGGATTTGGAACACTG +
Preference number: 5 (lower is better)
Translates to: ISKYFCNERRGENLGPALVHSIL*MGFGTL
Trigger: CAGTGTTCCAAATCCCATCAACAAAATGCTGTGAAC...CAAGGCGGGTCCCAAGTTCTCTCCTCTACGCTCATTGCAGAAATACTTTGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR CAA 90 bp CTGCCGTTATCAGAATGCATGGAGTGCAAGGCACAAAAGCCTTGCTGTGATTCGGTTTTACTCTCAGATTaGCTTCTCTTATGGAGTGAT +
Preference number: 5 (lower is better)
Translates to: LPLSECMECKAQKPCCDSVLLSD*LLLWSD
Trigger: ATCACTCCATAAGAGAAGCAAATCTGAGAGTAAAAC...CGAATCACAGCAAGGCTTTTGTGCCTTGCACTCCATGCATTCTGATAACGGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR CAA 90 bp AAAAGGGTTGAAGTAGATAACGTGTGCATCTGTTACAGTAAGTACTCCAGAGAGAAGTCTGTCACAGCCTaGCGGAATTTCTGCACTATC +
Preference number: 5 (lower is better)
Translates to: KRVEVDNVCICYSKYSREKSVTA*RNFCTI
Trigger: GATAGTGCAGAAATTCCGCAAGGCTGTGACAGACTT...CTCTCTGGAGTACTTACTGTAACAGATGCACACGTTATCTACTTCAACCCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR CAA 90 bp CTGGGATGGGGCGTTTTGTGGATTAACATGTGTTCTGACACAAGGACTACTCTATTCTCTAAATGGTCCTaGTCCAGCTTCAGTTTTTCA +
Preference number: 5 (lower is better)
Translates to: LGWGVLWINMCSDTRTTLFSKWS*SSFSFS
Trigger: TGAAAAACTGAAGCTGGACAAGGACCATTTAGAGAA...TAGAGTAGTCCTTGTGTCAGAACACATGTTAATCCACAAAACGCCCCATCCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR CAA 90 bp GTTATTCGGACGGTGGCCAGTTTGTCAGGGTCTGATTTCGACATTTTGGCAGAAGTGTATGCTAATTCTTaGGCTTTTGCTGATCCAATT +
Preference number: 5 (lower is better)
Translates to: VIRTVASLSGSDFDILAEVYANS*AFADPI
Trigger: AATTGGATCAGCAAAAGCCAAAGAATTAGCATACAC...TTCTGCCAAAATGTCGAAATCAGACCCTGACAAACTGGCCACCGTCCGAATAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369426.9
CDS-3UTR CAA 90 bp TTTAGGAAAGCTGCCGTTATCAGAATGCATGGAGTGCAAGGCACAAAAGCCTTGCCTTGCTGTGATTCGTaGAAACTTCCTATAGAAAAC +
Preference number: 5 (lower is better)
Translates to: FRKAAVIRMHGVQGTKALPCCDS*KLPIEN
Trigger: GTTTTCTATAGGAAGTTTCAACGAATCACAGCAAGG...CAAGGCTTTTGTGCCTTGCACTCCATGCATTCTGATAACGGCAGCTTTCCTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR CAA 90 bp TTTAGGAAAGCTGCCGTTATCAGAATGCATGGAGTGCAAGGCACAAAAGCCTTGAGTTGGTGTTATCTCTaGGAAAACAAGTTAAGCAGC +
Preference number: 5 (lower is better)
Translates to: FRKAAVIRMHGVQGTKALSWCYL*ENKLSS
Trigger: GCTGCTTAACTTGTTTTCCAAGAGATAACACCAACT...CAAGGCTTTTGTGCCTTGCACTCCATGCATTCTGATAACGGCAGCTTTCCTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR CAA 90 bp TGGGATGGGGCGTTTTGTGGATTAACATGTGTTCTGACACAAGGACTACTCTACAGAAGCTGTCAGTCATaGGGAATATCTGATTTGTCA +
Preference number: 5 (lower is better)
Translates to: WDGAFCGLTCVLTQGLLYRSCQS*GISDLS
Trigger: TGACAAATCAGATATTCCCAATGACTGACAGCTTCT...GTAGAGTAGTCCTTGTGTCAGAACACATGTTAATCCACAAAACGCCCCATCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR CAA 90 bp CTGGGATGGGGCGTTTTGTGGATTAACATGTGTTCTGACACAAGGACTACTCTAAGAAGCTGTCAGTCATaGGGAATATCTGATTTGTCA +
Preference number: 5 (lower is better)
Translates to: LGWGVLWINMCSDTRTTLRSCQS*GISDLS
Trigger: TGACAAATCAGATATTCCCAATGACTGACAGCTTCT...TAGAGTAGTCCTTGTGTCAGAACACATGTTAATCCACAAAACGCCCCATCCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR CAA 90 bp AGAAAACCCACCAATTTCTTCACCTCCTGGCACACAGTGTATGCTAATTCTTTGGTTCACAGCATTTTGTaGATGGGATTTGGAACACTG +
Preference number: 5 (lower is better)
Translates to: RKPTNFFTSWHTVYANSLVHSIL*MGFGTL
Trigger: CAGTGTTCCAAATCCCATCAACAAAATGCTGTGAAC...CAAAGAATTAGCATACACTGTGTGCCAGGAGGTGAAGAAATTGGTGGGTTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369426.9
CDS-3UTR CAA 90 bp TTGGGAATATCTGATTTGTCAGTCTTCACTGCTATTGTAGACTGGCAGAACCTAAACTCCCCATACTTCTaGTTGAAACCTTGTGCTAGA +
Preference number: 5 (lower is better)
Translates to: LGISDLSVFTAIVDWQNLNSPYF*LKPCAR
Trigger: TCTAGCACAAGGTTTCAACAAGAAGTATGGGGAGTT...TAGGTTCTGCCAGTCTACAATAGCAGTGAAGACTGACAAATCAGATATTCCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR CAA 90 bp TATAACTTTTTCTTTTTAGGAAAGCTGCCGTTATCAGAATGCATGGAGTGCAAGAAGTCTGTCACAGCCTaGCGGAATTTCTGCACTATC +
Preference number: 5 (lower is better)
Translates to: YNFFFLGKLPLSECMECKKSVTA*RNFCTI
Trigger: GATAGTGCAGAAATTCCGCAAGGCTGTGACAGACTT...CTTGCACTCCATGCATTCTGATAACGGCAGCTTTCCTAAAAAGAAAAAGTTATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR CAA 90 bp GGATGGGGCGTTTTGTGGATTAACATGTGTTCTGACACAAGGACTACTCTACTTTTGGGAATATCTGATTaGTCAGTCTTCACTGCTATT +
Preference number: 5 (lower is better)
Translates to: GWGVLWINMCSDTRTTLLLGISD*SVFTAI
Trigger: AATAGCAGTGAAGACTGACAAATCAGATATTCCCAA...AAGTAGAGTAGTCCTTGTGTCAGAACACATGTTAATCCACAAAACGCCCCATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR CAA 90 bp GGATGGGGCGTTTTGTGGATTAACATGTGTTCTGACACAAGGACTACTCTACTTATGAGCAAAAATGCTTaGCTCAACAACCTAGTTATG +
Preference number: 5 (lower is better)
Translates to: GWGVLWINMCSDTRTTLLMSKNA*LNNLVM
Trigger: CATAACTAGGTTGTTGAGCAAAGCATTTTTGCTCAT...AAGTAGAGTAGTCCTTGTGTCAGAACACATGTTAATCCACAAAACGCCCCATCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR CAA 90 bp TTTATGAGCTCTGAATACAAATTGGCATCTGATCAAATGGCATCTCAAGGATTAGAGGATTCCTGTAGGTaGAATGCCGGAAAATACTCG +
Preference number: 5 (lower is better)
Translates to: FMSSEYKLASDQMASQGLEDSCR*NAGKYS
Trigger: CGAGTATTTTCCGGCATTCAACCTACAGGAATCCTC...TAATCCTTGAGATGCCATTTGATCAGATGCCAATTTGTATTCAGAGCTCATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR CAA 90 bp GTACTGAATAAACAAGCACTATTCTTAAGAATAAGGGGTAAGGGTTTTACTCTCGAGGATTCCTGTAGGTaGAATGCCGGAAAATACTCG +
Preference number: 5 (lower is better)
Translates to: VLNKQALFLRIRGKGFTLEDSCR*NAGKYS
Trigger: CGAGTATTTTCCGGCATTCAACCTACAGGAATCCTC...GAGAGTAAAACCCTTACCCCTTATTCTTAAGAATAGTGCTTGTTTATTCAGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR CAA 90 bp TTGGGAATATCTGATTTGTCAGTCTTCACTGCTATTGTAGACTGGCAGAACCTACCTTGCTGTGATTCGTaGAAACTTCCTATAGAAAAC +
Preference number: 5 (lower is better)
Translates to: LGISDLSVFTAIVDWQNLPCCDS*KLPIEN
Trigger: GTTTTCTATAGGAAGTTTCAACGAATCACAGCAAGG...TAGGTTCTGCCAGTCTACAATAGCAGTGAAGACTGACAAATCAGATATTCCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR CAA 90 bp TTGGGAATATCTGATTTGTCAGTCTTCACTGCTATTGTAGACTGGCAGAACCTAGTTGTTCACAGCATTTaGTTGATGGGATTTGGAACA +
Preference number: 5 (lower is better)
Translates to: LGISDLSVFTAIVDWQNLVVHSI*LMGFGT
Trigger: TGTTCCAAATCCCATCAACAAAATGCTGTGAACAAC...TAGGTTCTGCCAGTCTACAATAGCAGTGAAGACTGACAAATCAGATATTCCCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR CAA 90 bp TTGGGAATATCTGATTTGTCAGTCTTCACTGCTATTGTAGACTGGCAGAACCTAAGCTCTGAATACAAATaGGCATCTGATCAAATGGCA +
Preference number: 5 (lower is better)
Translates to: LGISDLSVFTAIVDWQNLSSEYK*ASDQMA
Trigger: TGCCATTTGATCAGATGCCAATTTGTATTCAGAGCT...TAGGTTCTGCCAGTCTACAATAGCAGTGAAGACTGACAAATCAGATATTCCCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR CAA 90 bp CAAATTACTCCTTACTTCAATCACATTTCTGCAGGCCAAGGAGTGTGCCTCAATTTGGGAATATCTGATTaGTCAGTCTTCACTGCTATT +
Preference number: 5 (lower is better)
Translates to: QITPYFNHISAGQGVCLNLGISD*SVFTAI
Trigger: AATAGCAGTGAAGACTGACAAATCAGATATTCCCAA...ATTGAGGCACACTCCTTGGCCTGCAGAAATGTGATTGAAGTAAGGAGTAATTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR CAA 90 bp TTGGGAATATCTGATTTGTCAGTCTTCACTGCTATTGTAGACTGGCAGAACCTAGTTACAAAATCGATCTaGCTAACAGGTCTTGGTGTA +
Preference number: 5 (lower is better)
Translates to: LGISDLSVFTAIVDWQNLVTKSI*LTGLGV
Trigger: TACACCAAGACCTGTTAGCAAGATCGATTTTGTAAC...TAGGTTCTGCCAGTCTACAATAGCAGTGAAGACTGACAAATCAGATATTCCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR CAA 90 bp TTTATGAGCTCTGAATACAAATTGGCATCTGATCAAATGGCATCTCAAGGATTACTGGGATGGGGCGTTTaGTGGATTAACATGTGTTCT +
Preference number: 5 (lower is better)
Translates to: FMSSEYKLASDQMASQGLLGWGV*WINMCS
Trigger: AGAACACATGTTAATCCACAAAACGCCCCATCCCAG...TAATCCTTGAGATGCCATTTGATCAGATGCCAATTTGTATTCAGAGCTCATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR CAA 90 bp TCTTATGGAGTGATATCGTACAAGCTAATTGGATTCTCTCAGCCTCACTTTCCTGTGTATGCTAATTCTTaGGCTTTTGCTGATCCAATT +
Preference number: 5 (lower is better)
Translates to: SYGVISYKLIGFSQPHFPVYANS*AFADPI
Trigger: AATTGGATCAGCAAAAGCCAAAGAATTAGCATACAC...AGGAAAGTGAGGCTGAGAGAATCCAATTAGCTTGTACGATATCACTCCATAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR CAA 90 bp AAACATCATCAGTCGTTCCAACACCCACCTTCAAAATCAGAATGTTTAGAGTCTAGCTCTGAATACAAATaGGCATCTGATCAAATGGCA +
Preference number: 5 (lower is better)
Translates to: KHHQSFQHPPSKSECLESSSEYK*ASDQMA
Trigger: TGCCATTTGATCAGATGCCAATTTGTATTCAGAGCT...AGACTCTAAACATTCTGATTTTGAAGGTGGGTGTTGGAACGACTGATGATGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR CAA 90 bp TTTATGAGCTCTGAATACAAATTGGCATCTGATCAAATGGCATCTCAAGGATTAAACTCCCCATACTTCTaGTTGAAACCTTGTGCTAGA +
Preference number: 5 (lower is better)
Translates to: FMSSEYKLASDQMASQGLNSPYF*LKPCAR
Trigger: TCTAGCACAAGGTTTCAACAAGAAGTATGGGGAGTT...TAATCCTTGAGATGCCATTTGATCAGATGCCAATTTGTATTCAGAGCTCATAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR CAA 90 bp TATAACTTTTTCTTTTTAGGAAAGCTGCCGTTATCAGAATGCATGGAGTGCAAGAGTTGGTGTTATCTCTaGGAAAACAAGTTAAGCAGC +
Preference number: 5 (lower is better)
Translates to: YNFFFLGKLPLSECMECKSWCYL*ENKLSS
Trigger: GCTGCTTAACTTGTTTTCCAAGAGATAACACCAACT...CTTGCACTCCATGCATTCTGATAACGGCAGCTTTCCTAAAAAGAAAAAGTTATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR CAA 90 bp TGTTGTTCACAGCATTTTGTTGATGGGATTTGGAACACTGTCGTATTTCAAAGCGTTTTACTCTCAGATTaGCTTCTCTTATGGAGTGAT +
Preference number: 5 (lower is better)
Translates to: CCSQHFVDGIWNTVVFQSVLLSD*LLLWSD
Trigger: ATCACTCCATAAGAGAAGCAAATCTGAGAGTAAAAC...GCTTTGAAATACGACAGTGTTCCAAATCCCATCAACAAAATGCTGTGAACAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR CAA 90 bp GATGGGATTTGGAACACTGTCGTATTTCAAAGCTACAAAGCAATATTCATCAAATTCTCTAAATGGTCCTaGTCCAGCTTCAGTTTTTCA +
Preference number: 5 (lower is better)
Translates to: DGIWNTVVFQSYKAIFIKFSKWS*SSFSFS
Trigger: TGAAAAACTGAAGCTGGACAAGGACCATTTAGAGAA...TTTGATGAATATTGCTTTGTAGCTTTGAAATACGACAGTGTTCCAAATCCCATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS-3UTR CAA 90 bp GATGGGATTTGGAACACTGTCGTATTTCAAAGCTACAAAGCAATATTCATCAAAGTTGTTCACAGCATTTaGTTGATGGGATTTGGAACA +
Preference number: 5 (lower is better)
Translates to: DGIWNTVVFQSYKAIFIKVVHSI*LMGFGT
Trigger: TGTTCCAAATCCCATCAACAAAATGCTGTGAACAAC...TTTGATGAATATTGCTTTGTAGCTTTGAAATACGACAGTGTTCCAAATCCCATC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000369426.9
CDS GCA 90 bp GCTTCTTGCTGTCTTTCATCCTTCTATCATGTGATGGAATGCTTTTaGACATGTATTTTCCTTCTTGTGATGAAATTTAGCTATCAGAAA +
Preference number: 5 (lower is better)
Translates to: ASCCLSSFYHVMECF*TCIFLLVMKFSYQK
Trigger: TTTCTGATAGCTAAATTTCATCACAAGAAGGAAAATACATGTGCAAAAGCATTCCATCACATGATAGAAGGATGAAAGACAGCAAGAAGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497402.1
CDS CCA 72 bp TGCCCGGCAACAGCGGCGGCGCTCCGCTCCCAGAACTaGAGGTGGCGGCAAGAGGTCAGAAAGCGGCGCGCT +
Preference number: 6 (lower is better)
Translates to: CPATAAALRSQN*RWRQEVRKRRA
Trigger: AGCGCGCCGCTTTCTGACCTCTTGCCGCCACCTCCAGTTCTGGGAGCGGAGCGCCGCCGCTGTTGCCGGGCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497761.1
CDS GCA 72 bp TCTGAAAACATCACACGCGGGGTAGGCTCACCGCGTTaGCCGGCAACAGCGGCGGCGCTCCGCTCCCAGAAC +
Preference number: 6 (lower is better)
Translates to: SENITRGVGSPR*PATAAALRSQN
Trigger: GTTCTGGGAGCGGAGCGCCGCCGCTGTTGCCGGGCAACGCGGTGAGCCTACCCCGCGTGTGATGTTTTCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497761.1
CDS GCA 72 bp CTGGAGAGCGGGAGCAGCTGCGGATCCCTTATGAAGTaGCCGGATGAAGCTCCAGCGCTCACGCGCTTTCCG +
Preference number: 6 (lower is better)
Translates to: LESGSSCGSLMK*PDEAPALTRFP
Trigger: CGGAAAGCGCGTGAGCGCTGGAGCTTCATCCGGGCACTTCATAAGGGATCCGCAGCTGCTCCCGCTCTCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000235521.5
ENST00000369426.9
ENST00000495746.5
ENST00000497761.1
CDS TCA 72 bp TTTCCCTGGAGAGCGGGAGCAGCTGCGGATCCCTTATaGAGTGCCCGGATGAAGCTCCAGCGCTCACGCGCT +
Preference number: 6 (lower is better)
Translates to: FPWRAGAAADPL*SARMKLQRSRA
Trigger: AGCGCGTGAGCGCTGGAGCTTCATCCGGGCACTTCATAAGGGATCCGCAGCTGCTCCCGCTCTCCAGGGAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497761.1
CDS TCA 72 bp CGGGAGCAGCTGCGGATCCCTTATGAAGTGCCCGGATaGAGCTCCAGCGCTCACGCGCTTTCCGCATTGAGT +
Preference number: 6 (lower is better)
Translates to: REQLRIPYEVPG*SSSAHALSALS
Trigger: ACTCAATGCGGAAAGCGCGTGAGCGCTGGAGCTTCATCCGGGCACTTCATAAGGGATCCGCAGCTGCTCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000235521.5
ENST00000369426.9
ENST00000495746.5
ENST00000497761.1
CDS TCA 72 bp TCTTTCTGGAGAGCGGGAGCAGCTGCGGATCCCTTATaGAGTGCCCGGATGAAGCTCCAGCGCTCACGCGCT +
Preference number: 6 (lower is better)
Translates to: SFWRAGAAADPL*SARMKLQRSRA
Trigger: AGCGCGTGAGCGCTGGAGCTTCATCCGGGCACTTCATAAGGGATCCGCAGCTGCTCCCGCTCTCCAGAAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000235521.5
ENST00000369426.9
ENST00000495746.5
CDS GCA 72 bp TCGCTTCTTGCTGTCTTTCTGGAGAGCGGGAGCAGCTaGGGATCCCTTATGAAGTGCCCGGATGAAGCTCCA +
Preference number: 6 (lower is better)
Translates to: SLLAVFLESGSS*GSLMKCPDEAP
Trigger: TGGAGCTTCATCCGGGCACTTCATAAGGGATCCGCAGCTGCTCCCGCTCTCCAGAAAGACAGCAAGAAGCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000235521.5
ENST00000369426.9
ENST00000495746.5
CDS CCA 72 bp GGACTTGTACAACAGAATGTCGGCTGCCTGGAGTACTaGGTATGTGAGCAGGCCCACCGTGCCATCGTGCTT +
Preference number: 6 (lower is better)
Translates to: GLVQQNVGCLEY*VCEQAHRAIVL
Trigger: AAGCACGATGGCACGGTGGGCCTGCTCACATACCCAGTACTCCAGGCAGCCGACATTCTGTTGTACAAGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000235521.5
ENST00000369426.9
ENST00000497402.1
CDS GCA 72 bp TGCACTGACACTTGCTCAAGTACCACACTGCCAACCTaGTGCCCCGACCCAAGCTGCCCAATGCCTAACAAA +
Preference number: 6 (lower is better)
Translates to: CTDTCSSTTLPT*CPDPSCPMPNK
Trigger: TTTGTTAGGCATTGGGCAGCTTGGGTCGGGGCAGCAGGTTGGCAGTGTGGTACTTGAGCAAGTGTCAGTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497761.1
CDS GCA 72 bp ACCAGGAGCAACCAGAATGGAAGATGCACTGACACTTaGTCAAGTACCACACTGCCAACCTGCTGCCCCGAC +
Preference number: 6 (lower is better)
Translates to: TRSNQNGRCTDT*SSTTLPTCCPD
Trigger: GTCGGGGCAGCAGGTTGGCAGTGTGGTACTTGAGCAAGTGTCAGTGCATCTTCCATTCTGGTTGCTCCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497761.1
CDS CCA 72 bp ATGTCCAGGATGCTCTGCCGAAGGACAGCTGGGTCTTaGGGGACAGTAATGGAGTGGAGGTCAACAATGCTG +
Preference number: 6 (lower is better)
Translates to: MSRMLCRRTAGS*GTVMEWRSTML
Trigger: CAGCATTGTTGACCTCCACTCCATTACTGTCCCCCAAGACCCAGCTGTCCTTCGGCAGAGCATCCTGGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000235521.5
ENST00000369426.9
ENST00000495746.5
ENST00000497402.1
CDS CAA 72 bp CATGTCCAGGATGCTCTGCCGAAGGACAGCTGGGTCTaGGGGGACAGTAATGGAGTGGAGGTCAACAATGCT +
Preference number: 6 (lower is better)
Translates to: HVQDALPKDSWV*GDSNGVEVNNA
Trigger: AGCATTGTTGACCTCCACTCCATTACTGTCCCCCAAGACCCAGCTGTCCTTCGGCAGAGCATCCTGGACATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000235521.5
ENST00000369426.9
ENST00000495746.5
ENST00000497402.1
CDS TCA 72 bp TGGAGCCACCAGGAGCAACCAGAATGGAAGATGCACTaGCACTTGCTCAAGTACCACACTGCCAACCTGCTG +
Preference number: 6 (lower is better)
Translates to: WSHQEQPEWKMH*HLLKYHTANLL
Trigger: CAGCAGGTTGGCAGTGTGGTACTTGAGCAAGTGTCAGTGCATCTTCCATTCTGGTTGCTCCTGGTGGCTCCA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497761.1
CDS CAA 90 bp CGGCGCGCTTTTTCCACCAAGAAACCTTTACGTCATCACGTATCCTaGCAACGTCACTACGCTCTGAGCAGGCCGACAGTCATAGACGAG +
Preference number: 6 (lower is better)
Translates to: RRAFSTKKPLRHHVS*QRHYALSRPTVIDE
Trigger: CTCGTCTATGACTGTCGGCCTGCTCAGAGCGTAGTGACGTTGCAAGGATACGTGATGACGTAAAGGTTTCTTGGTGGAAAAAGCGCGCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497761.1
CDS CAA 90 bp ACAGCAGTGTTGTCAAGCGCAGGACAGGACAAACTCTGTAGCAGCTaGCGGTCACTCTTTCACAGCCTGCTAGATAGAGCAGTGCTGTGG +
Preference number: 6 (lower is better)
Translates to: TAVLSSAGQDKLCSS*RSLFHSLLDRAVLW
Trigger: CCACAGCACTGCTCTATCTAGCAGGCTGTGAAAGAGTGACCGCAAGCTGCTACAGAGTTTGTCCTGTCCTGCGCTTGACAACACTGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497761.1
CDS CAA 90 bp CCGCGACATGGTCTCCGTACGACGAGATTAATGGTAACAGCAGTGTaGTCAAGCGCAGGACAGGACAAACTCTGTAGCAGCTTGCGGTCA +
Preference number: 6 (lower is better)
Translates to: PRHGLRTTRLMVTAV*SSAGQDKLCSSLRS
Trigger: TGACCGCAAGCTGCTACAGAGTTTGTCCTGTCCTGCGCTTGACAACACTGCTGTTACCATTAATCTCGTCGTACGGAGACCATGTCGCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497761.1
CDS TCA 72 bp ACCACAAGAAGAGCAGTCTCTAAAACAACCCGTCTCTaGAAACATCACACGCGGGGTAGGCTCACCGCGTTG +
Preference number: 6 (lower is better)
Translates to: TTRRAVSKTTRL*KHHTRGRLTAL
Trigger: CAACGCGGTGAGCCTACCCCGCGTGTGATGTTTTCAGAGACGGGTTGTTTTAGAGACTGCTCTTCTTGTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497761.1
CDS CCA 72 bp TCACTCTTTCACAGCCTGCTAGATAGAGCAGTGCTGTaGAGCCACCAGGAGCAACCAGAATGGAAGATGCAC +
Preference number: 6 (lower is better)
Translates to: SLFHSLLDRAVL*SHQEQPEWKMH
Trigger: GTGCATCTTCCATTCTGGTTGCTCCTGGTGGCTCCACAGCACTGCTCTATCTAGCAGGCTGTGAAAGAGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497761.1
CDS CAA 90 bp CTCAATGGCTCCCAGGTAATTGCCCAGGTGGAGGATTCCTGTAGGTaGAATGCCGGAAAATACTCGCTTCTTGCTGTCTTTCTGGAGAGC +
Preference number: 6 (lower is better)
Translates to: LNGSQVIAQVEDSCR*NAGKYSLLAVFLES
Trigger: GCTCTCCAGAAAGACAGCAAGAAGCGAGTATTTTCCGGCATTCAACCTACAGGAATCCTCCACCTGGGCAATTACCTGGGAGCCATTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000235521.5
ENST00000369426.9
ENST00000495746.5
CDS CCA 72 bp AGTCATATTCATCCTGTAACCTCACCCAGCTCTCAATaGCTCCCAGGTAATTGCCCAGGTGGAGGATTCCTG +
Preference number: 6 (lower is better)
Translates to: SHIHPVTSPSSQ*LPGNCPGGGFL
Trigger: CAGGAATCCTCCACCTGGGCAATTACCTGGGAGCCATTGAGAGCTGGGTGAGGTTACAGGATGAATATGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000235521.5
ENST00000369426.9
ENST00000495746.5
ENST00000497402.1
CDS CAA 72 bp TTGTCAAGCGCAGGACAGGACAAACTCTGTAGCAGCTaGCGGTCACTCTTTCACAGCCTGCTAGATAGAGCA +
Preference number: 6 (lower is better)
Translates to: LSSAGQDKLCSS*RSLFHSLLDRA
Trigger: TGCTCTATCTAGCAGGCTGTGAAAGAGTGACCGCAAGCTGCTACAGAGTTTGTCCTGTCCTGCGCTTGACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497761.1
CDS CAA 72 bp GGTCTCCGTACGACGAGATTAATGGTAACAGCAGTGTaGTCAAGCGCAGGACAGGACAAACTCTGTAGCAGC +
Preference number: 6 (lower is better)
Translates to: GLRTTRLMVTAV*SSAGQDKLCSS
Trigger: GCTGCTACAGAGTTTGTCCTGTCCTGCGCTTGACAACACTGCTGTTACCATTAATCTCGTCGTACGGAGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497761.1
CDS CAA 72 bp TTTTCCACCAAGAAACCTTTACGTCATCACGTATCCTaGCAACGTCACTACGCTCTGAGCAGGCCGACAGTC +
Preference number: 6 (lower is better)
Translates to: FSTKKPLRHHVS*QRHYALSRPTV
Trigger: GACTGTCGGCCTGCTCAGAGCGTAGTGACGTTGCAAGGATACGTGATGACGTAAAGGTTTCTTGGTGGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497761.1
CDS CAA 90 bp CTCAATGGCTCCCAGGTAATTGCCCAGGTGGAGGATTCCTGTAGGTaGAATGCCGGAAAATACTCGCTTCTTGCTGTCTTTCATCCTTCT +
Preference number: 6 (lower is better)
Translates to: LNGSQVIAQVEDSCR*NAGKYSLLAVFHPS
Trigger: AGAAGGATGAAAGACAGCAAGAAGCGAGTATTTTCCGGCATTCAACCTACAGGAATCCTCCACCTGGGCAATTACCTGGGAGCCATTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497402.1
CDS CAA 72 bp TCCCAGGTAATTGCCCAGGTGGAGGATTCCTGTAGGTaGAATGCCGGAAAATACTCGCTTCTTGCTGTCTTT +
Preference number: 6 (lower is better)
Translates to: SQVIAQVEDSCR*NAGKYSLLAVF
Trigger: AAAGACAGCAAGAAGCGAGTATTTTCCGGCATTCAACCTACAGGAATCCTCCACCTGGGCAATTACCTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000235521.5
ENST00000369426.9
ENST00000495746.5
ENST00000497402.1
CDS CCA 72 bp CACCAACACACACATACTGAGAATGGACTCGGGCACTaGAAAGAACTCCCCATACTTCTTGTTGAAACCTTG +
Preference number: 6 (lower is better)
Translates to: HQHTHTENGLGH*KELPILLVETL
Trigger: CAAGGTTTCAACAAGAAGTATGGGGAGTTCTTTCCAGTGCCCGAGTCCATTCTCAGTATGTGTGTGTTGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369426.9
CDS CCA 72 bp TACCTTCTTCATGGATGTGAGAATGGACTCGGGCACTaGAAAGAACTCCCCATACTTCTTGTTGAAACCTTG +
Preference number: 6 (lower is better)
Translates to: YLLHGCENGLGH*KELPILLVETL
Trigger: CAAGGTTTCAACAAGAAGTATGGGGAGTTCTTTCCAGTGCCCGAGTCCATTCTCACATCCATGAAGAAGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235521.5
ENST00000495746.5
CDS TCA 72 bp TCTCCCGTAGATAAAGTATGTCAAAGTGCTTGCCACTaGGACTGTACTTGGAAGACGTTTGGTAAAATCCTG +
Preference number: 6 (lower is better)
Translates to: SPVDKVCQSACH*DCTWKTFGKIL
Trigger: CAGGATTTTACCAAACGTCTTCCAAGTACAGTCTCAGTGGCAAGCACTTTGACATACTTTATCTACGGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497761.1