RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for WAPL (Homo sapiens)

Ensembl gene IDs: ENSG00000062650

Ensembl transcript IDs: ENST00000298767.10, ENST00000372075.2, ENST00000484070.1, ENST00000489996.1

Found 289 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGGTCTTCTCTAAACCAGCAATTTAAGGCTTTGCGCTTATGCAATTaGTCCTGTCACTCTATAGAAGAATATACATGTTATCTGGAAACA +
Preference number: 1 (lower is better)
Translates to: GSSLNQQFKALRLCN*SCHSIEEYTCYLET
Trigger: TGTTTCCAGATAACATGTATATTCTTCTATAGAGTGACAGGATCAATTGCATAAGCGCAAAGCCTTAAATTGCTGGTTTAGAGAAGACCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298767.10
3UTR-3UTR TCA 90 bp AGGCAGCCACTGCATTTAAAAACATTACAGCTGGCACTGATACAAGAGCCCCGATGCACCTGGCTGGCATaGCAACAGTGGCTCAACATA +
Preference number: 2 (lower is better)
Translates to: RQPLHLKTLQLALIQEPRCTWLA*QQWLNI
Trigger: TATGTTGAGCCACTGTTGTCATGCCAGCCAGGTGCA...TCGGGGCTCTTGTATCAGTGCCAGCTGTAATGTTTTTAAATGCAGTGGCTGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298767.10
3UTR-3UTR TCA 90 bp GCCTTTGCACCTGGCTGGCATGACAACAGTGGCTCAACATACACAGCAGTTGCAGAATTGTTAACAGCCTaGACCTTTTCCCCTCATTTT +
Preference number: 2 (lower is better)
Translates to: AFAPGWHDNSGSTYTAVAELLTA*TFSPHF
Trigger: AAAATGAGGGGAAAAGGTTCAGGCTGTTAACAATTC...TGCAACTGCTGTGTATGTTGAGCCACTGTTGTCATGCCAGCCAGGTGCAAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298767.10
ENST00000372075.2
3UTR-3UTR GCA 90 bp GCCTTTGCACCTGGCTGGCATGACAACAGTGGCTCAACATACACAGCAGTTGCATTAGCAAATGCCGAATaGATGACGAAGAAATCAGGT +
Preference number: 2 (lower is better)
Translates to: AFAPGWHDNSGSTYTAVALANAE*MTKKSG
Trigger: ACCTGATTTCTTCGTCATGCATTCGGCATTTGCTAA...TGCAACTGCTGTGTATGTTGAGCCACTGTTGTCATGCCAGCCAGGTGCAAAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298767.10
ENST00000372075.2
3UTR-3UTR TCA 90 bp TTAAGAGCCTCCCTAGCATTAAGTGTAAACTACCCTGGGTTTGACTATTTTGCCCAAATGCCGAATGCATaGCGAAGAAATCAGGTGGCC +
Preference number: 2 (lower is better)
Translates to: LRASLALSVNYPGFDYFAQMPNA*RRNQVA
Trigger: GGCCACCTGATTTCTTCGTCATGCATTCGGCATTTG...GGCAAAATAGTCAAACCCAGGGTAGTTTACACTTAATGCTAGGGAGGCTCTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298767.10
3UTR-3UTR CCA 90 bp GCACCTGGCTGGCATGACAACAGTGGCTCAACATACACAGCAGTTGCACTAACAACTGATGAATGTTCTTaGTATATCTTCAAGGACTTC +
Preference number: 2 (lower is better)
Translates to: APGWHDNSGSTYTAVALTTDECS*YIFKDF
Trigger: GAAGTCCTTGAAGATATACCAAGAACATTCATCAGT...TGTTAGTGCAACTGCTGTGTATGTTGAGCCACTGTTGTCATGCCAGCCAGGTGC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298767.10
ENST00000372075.2
3UTR-3UTR TCA 90 bp TTAAGAGCCTCCCTAGCATTAAGTGTAAACTACCCTGGGTTTGACTATTTTGCCGAATTGTTAACAGCCTaGACCTTTTCCCCTCATTTT +
Preference number: 2 (lower is better)
Translates to: LRASLALSVNYPGFDYFAELLTA*TFSPHF
Trigger: AAAATGAGGGGAAAAGGTTCAGGCTGTTAACAATTC...GGCAAAATAGTCAAACCCAGGGTAGTTTACACTTAATGCTAGGGAGGCTCTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000298767.10
3UTR-3UTR CCA 90 bp ACTACCCTGGGTTTGACTATTTTGCCTCCTCCTTTTAACAGGGCACATCATCTTACTGATGAATGTTCTTaGTATATCTTCAAGGACTTC +
Preference number: 2 (lower is better)
Translates to: TTLGLTILPPPFNRAHHLTDECS*YIFKDF
Trigger: GAAGTCCTTGAAGATATACCAAGAACATTCATCAGT...AAGATGATGTGCCCTGTTAAAAGGAGGAGGCAAAATAGTCAAACCCAGGGTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298767.10
3UTR-3UTR CAA 90 bp GCACCTGGCTGGCATGACAACAGTGGCTCAACATACACAGCAGTTGCACTAACAGACTTCTTTCATGACTaGACTTTTCTTTGTCTAAGG +
Preference number: 3 (lower is better)
Translates to: APGWHDNSGSTYTAVALTDFFHD*TFLCLR
Trigger: CCTTAGACAAAGAAAAGTCAAGTCATGAAAGAAGTC...TGTTAGTGCAACTGCTGTGTATGTTGAGCCACTGTTGTCATGCCAGCCAGGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298767.10
ENST00000372075.2
3UTR TCA 72 bp AGCCTCCCTAGCATTAAGTGTAAACTACCCTGGGTTTaGCTATTTTGCCTCCTCCTTTTAACAGGGCACATC +
Preference number: 3 (lower is better)
Translates to: SLPSIKCKLPWV*LFCLLLLTGHI
Trigger: GATGTGCCCTGTTAAAAGGAGGAGGCAAAATAGTCAAACCCAGGGTAGTTTACACTTAATGCTAGGGAGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298767.10
3UTR-3UTR CAA 90 bp ACTACCCTGGGTTTGACTATTTTGCCTCCTCCTTTTAACAGGGCACATCATCTTAAAGGAACTAAGCTGTaGTCTAGAATGTCCTCAGAA +
Preference number: 3 (lower is better)
Translates to: TTLGLTILPPPFNRAHHLKGTKL*SRMSSE
Trigger: TTCTGAGGACATTCTAGACAACAGCTTAGTTCCTTT...AAGATGATGTGCCCTGTTAAAAGGAGGAGGCAAAATAGTCAAACCCAGGGTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR GCA 90 bp GCCTTTGCACCTGGCTGGCATGACAACAGTGGCTCAACATACACAGCAGTTGCAGCTGGTAACAGAGCCTaGTGTGTGCCCCCGCTGGGC +
Preference number: 4 (lower is better)
Translates to: AFAPGWHDNSGSTYTAVAAGNRA*CVPPLG
Trigger: GCCCAGCGGGGGCACACAGCAGGCTCTGTTACCAGC...TGCAACTGCTGTGTATGTTGAGCCACTGTTGTCATGCCAGCCAGGTGCAAAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR TCA 90 bp GCACCTGGCTGGCATGACAACAGTGGCTCAACATACACAGCAGTTGCACTAACATCAGCGCTGTGCCTATaGGACCGTCCTGCTCTCCTG +
Preference number: 4 (lower is better)
Translates to: APGWHDNSGSTYTAVALTSALCL*DRPALL
Trigger: CAGGAGAGCAGGACGGTCTCATAGGCACAGCGCTGA...TGTTAGTGCAACTGCTGTGTATGTTGAGCCACTGTTGTCATGCCAGCCAGGTGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298767.10
ENST00000372075.2
CDS-3UTR TCA 90 bp TTAAGAGCCTCCCTAGCATTAAGTGTAAACTACCCTGGGTTTGACTATTTTGCCAGCAGGGCCGGCAGGTaGGAGCCGAGAGAGGCGAGG +
Preference number: 4 (lower is better)
Translates to: LRASLALSVNYPGFDYFASRAGR*EPREAR
Trigger: CCTCGCCTCTCTCGGCTCTCACCTGCCGGCCCTGCT...GGCAAAATAGTCAAACCCAGGGTAGTTTACACTTAATGCTAGGGAGGCTCTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR GCA 90 bp GCCTTTGCACCTGGCTGGCATGACAACAGTGGCTCAACATACACAGCAGTTGCACCGGTGAATGGTCAGTaGTGGAGTTTGAACAGGGCC +
Preference number: 4 (lower is better)
Translates to: AFAPGWHDNSGSTYTAVAPVNGQ*WSLNRA
Trigger: GGCCCTGTTCAAACTCCAGCACTGACCATTCACCGG...TGCAACTGCTGTGTATGTTGAGCCACTGTTGTCATGCCAGCCAGGTGCAAAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR GCA 90 bp TTAAGAGCCTCCCTAGCATTAAGTGTAAACTACCCTGGGTTTGACTATTTTGCCTCGGAGCCTGGCGGGTaGTTTGGCCACGGGCCGCCT +
Preference number: 4 (lower is better)
Translates to: LRASLALSVNYPGFDYFASEPGG*FGHGPP
Trigger: AGGCGGCCCGTGGCCAAAGCACCCGCCAGGCTCCGA...GGCAAAATAGTCAAACCCAGGGTAGTTTACACTTAATGCTAGGGAGGCTCTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR CCA 90 bp AGGCAGCCACTGCATTTAAAAACATTACAGCTGGCACTGATACAAGAGCCCCGAATTCTCCTCGGAGCCTaGCGGGTGCTTTGGCCACGG +
Preference number: 4 (lower is better)
Translates to: RQPLHLKTLQLALIQEPRILLGA*RVLWPR
Trigger: CCGTGGCCAAAGCACCCGCCAGGCTCCGAGGAGAAT...TCGGGGCTCTTGTATCAGTGCCAGCTGTAATGTTTTTAAATGCAGTGGCTGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR TCA 90 bp AGGCAGCCACTGCATTTAAAAACATTACAGCTGGCACTGATACAAGAGCCCCGAGCTTTGGCTAAGGCCTaGCTGGTGCCGTCCATCAGC +
Preference number: 4 (lower is better)
Translates to: RQPLHLKTLQLALIQEPRALAKA*LVPSIS
Trigger: GCTGATGGACGGCACCAGTCAGGCCTTAGCCAAAGC...TCGGGGCTCTTGTATCAGTGCCAGCTGTAATGTTTTTAAATGCAGTGGCTGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR TCA 90 bp GCCTTTGCACCTGGCTGGCATGACAACAGTGGCTCAACATACACAGCAGTTGCATGCACCTGGCTGGCATaGCAACAGTGGCTCAACATA +
Preference number: 4 (lower is better)
Translates to: AFAPGWHDNSGSTYTAVACTWLA*QQWLNI
Trigger: TATGTTGAGCCACTGTTGTCATGCCAGCCAGGTGCA...TGCAACTGCTGTGTATGTTGAGCCACTGTTGTCATGCCAGCCAGGTGCAAAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298767.10
ENST00000372075.2
CDS-3UTR CCA 90 bp GCACCTGGCTGGCATGACAACAGTGGCTCAACATACACAGCAGTTGCACTAACATTACTTTCTGCTAGCTaGGCTGCCCGCTCTCGCTCA +
Preference number: 4 (lower is better)
Translates to: APGWHDNSGSTYTAVALTLLSAS*AARSRS
Trigger: TGAGCGAGAGCGGGCAGCCCAGCTAGCAGAAAGTAA...TGTTAGTGCAACTGCTGTGTATGTTGAGCCACTGTTGTCATGCCAGCCAGGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298767.10
ENST00000372075.2
CDS-3UTR TCA 90 bp GCCTTTGCACCTGGCTGGCATGACAACAGTGGCTCAACATACACAGCAGTTGCATGTTTGCCGGCATGCTaGAGGGCTTTATTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: AFAPGWHDNSGSTYTAVACLPAC*RALLRS
Trigger: TGACCTCAATAAAGCCCTTCAGCATGCCGGCAAACA...TGCAACTGCTGTGTATGTTGAGCCACTGTTGTCATGCCAGCCAGGTGCAAAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298767.10
ENST00000372075.2
CDS-3UTR TCA 90 bp GCCTTTGCACCTGGCTGGCATGACAACAGTGGCTCAACATACACAGCAGTTGCACAAATGCCGAATGCATaGCGAAGAAATCAGGTGGCC +
Preference number: 4 (lower is better)
Translates to: AFAPGWHDNSGSTYTAVAQMPNA*RRNQVA
Trigger: GGCCACCTGATTTCTTCGTCATGCATTCGGCATTTG...TGCAACTGCTGTGTATGTTGAGCCACTGTTGTCATGCCAGCCAGGTGCAAAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298767.10
ENST00000372075.2
CDS-3UTR GCA 90 bp GCCTTTGCACCTGGCTGGCATGACAACAGTGGCTCAACATACACAGCAGTTGCACCATGTGCTCTCAGGTaGATTCGAAAACTGGGCATG +
Preference number: 4 (lower is better)
Translates to: AFAPGWHDNSGSTYTAVAPCALR*IRKLGM
Trigger: CATGCCCAGTTTTCGAATGCACCTGAGAGCACATGG...TGCAACTGCTGTGTATGTTGAGCCACTGTTGTCATGCCAGCCAGGTGCAAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR GCA 90 bp GCACCTGGCTGGCATGACAACAGTGGCTCAACATACACAGCAGTTGCACTAACACCTATGAGACCGTCCTaGTCTCCTGTTTTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: APGWHDNSGSTYTAVALTPMRPS*SPVLVL
Trigger: CAGCACCAAAACAGGAGAGCAGGACGGTCTCATAGG...TGTTAGTGCAACTGCTGTGTATGTTGAGCCACTGTTGTCATGCCAGCCAGGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298767.10
ENST00000372075.2
CDS-3UTR CCA 90 bp TTAAGAGCCTCCCTAGCATTAAGTGTAAACTACCCTGGGTTTGACTATTTTGCCAGGCCTAGCTCTCGCTaGCCGCCACTGCTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: LRASLALSVNYPGFDYFARPSSR*PPLLEL
Trigger: CAGCTCCAGCAGTGGCGGCCAGCGAGAGCTAGGCCT...GGCAAAATAGTCAAACCCAGGGTAGTTTACACTTAATGCTAGGGAGGCTCTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR TCA 90 bp GCCTTTGCACCTGGCTGGCATGACAACAGTGGCTCAACATACACAGCAGTTGCAGTGACCTCTTCCAACTaGGCAGCTTCACTAGATTCT +
Preference number: 4 (lower is better)
Translates to: AFAPGWHDNSGSTYTAVAVTSSN*AASLDS
Trigger: AGAATCTAGTGAAGCTGCTCAGTTGGAAGAGGTCAC...TGCAACTGCTGTGTATGTTGAGCCACTGTTGTCATGCCAGCCAGGTGCAAAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR TCA 90 bp GCCTTTGCACCTGGCTGGCATGACAACAGTGGCTCAACATACACAGCAGTTGCACCCAGGCAGTTCTTCTaGATCTGGATGATTCCAATG +
Preference number: 4 (lower is better)
Translates to: AFAPGWHDNSGSTYTAVAPRQFF*IWMIPM
Trigger: CATTGGAATCATCCAGATTCAGAAGAACTGCCTGGG...TGCAACTGCTGTGTATGTTGAGCCACTGTTGTCATGCCAGCCAGGTGCAAAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR TCA 90 bp GCCTTTGCACCTGGCTGGCATGACAACAGTGGCTCAACATACACAGCAGTTGCATCAAATCTCTGCTCCTaGGGTAGGTACTTTGGAACC +
Preference number: 4 (lower is better)
Translates to: AFAPGWHDNSGSTYTAVASNLCS*GRYFGT
Trigger: GGTTCCAAAGTACCTACCTCAGGAGCAGAGATTTGA...TGCAACTGCTGTGTATGTTGAGCCACTGTTGTCATGCCAGCCAGGTGCAAAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298767.10
ENST00000372075.2
CDS-3UTR TCA 90 bp GCACCTGGCTGGCATGACAACAGTGGCTCAACATACACAGCAGTTGCACTAACACCACTCTTATCATGCTaGGTGGTGGGAGCATCTTTG +
Preference number: 4 (lower is better)
Translates to: APGWHDNSGSTYTAVALTPLLSC*VVGASL
Trigger: CAAAGATGCTCCCACCACTCAGCATGATAAGAGTGG...TGTTAGTGCAACTGCTGTGTATGTTGAGCCACTGTTGTCATGCCAGCCAGGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298767.10
ENST00000372075.2
CDS-3UTR TCA 90 bp GCACCTGGCTGGCATGACAACAGTGGCTCAACATACACAGCAGTTGCACTAACAGCATTACCGAGCACCTaGAGCAAAGGTAAAGCAGCT +
Preference number: 4 (lower is better)
Translates to: APGWHDNSGSTYTAVALTALPST*SKGKAA
Trigger: AGCTGCTTTACCTTTGCTTCAGGTGCTCGGTAATGC...TGTTAGTGCAACTGCTGTGTATGTTGAGCCACTGTTGTCATGCCAGCCAGGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298767.10
ENST00000372075.2
CDS-3UTR CCA 90 bp GCCTTTGCACCTGGCTGGCATGACAACAGTGGCTCAACATACACAGCAGTTGCATATATACAGCTTTTGTaGGTGACCGTTTGGGGCCAC +
Preference number: 4 (lower is better)
Translates to: AFAPGWHDNSGSTYTAVAYIQLL*VTVWGH
Trigger: GTGGCCCCAAACGGTCACCCACAAAAGCTGTATATA...TGCAACTGCTGTGTATGTTGAGCCACTGTTGTCATGCCAGCCAGGTGCAAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR CCA 90 bp GCACCTGGCTGGCATGACAACAGTGGCTCAACATACACAGCAGTTGCACTAACACCTGCTCTCCTGTTTTaGTGCTGCCCCACTCATTAT +
Preference number: 4 (lower is better)
Translates to: APGWHDNSGSTYTAVALTPALLF*CCPTHY
Trigger: ATAATGAGTGGGGCAGCACCAAAACAGGAGAGCAGG...TGTTAGTGCAACTGCTGTGTATGTTGAGCCACTGTTGTCATGCCAGCCAGGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298767.10
ENST00000372075.2
CDS-3UTR TCA 90 bp GCACCTGGCTGGCATGACAACAGTGGCTCAACATACACAGCAGTTGCACTAACACTTGGATATCTGGTTTaGAATTGGGCCTCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: APGWHDNSGSTYTAVALTLGYLV*NWASSA
Trigger: GGCAGAAGAGGCCCAATTTCAAACCAGATATCCAAG...TGTTAGTGCAACTGCTGTGTATGTTGAGCCACTGTTGTCATGCCAGCCAGGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR TCA 90 bp GCACCTGGCTGGCATGACAACAGTGGCTCAACATACACAGCAGTTGCACTAACACTTCAAGTACTGAAGTaGCCTCTTCCAACTGAGCAG +
Preference number: 4 (lower is better)
Translates to: APGWHDNSGSTYTAVALTLQVLK*PLPTEQ
Trigger: CTGCTCAGTTGGAAGAGGTCACTTCAGTACTTGAAG...TGTTAGTGCAACTGCTGTGTATGTTGAGCCACTGTTGTCATGCCAGCCAGGTGC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR TCA 90 bp AGGCAGCCACTGCATTTAAAAACATTACAGCTGGCACTGATACAAGAGCCCCGACAGGAGTGGATGCAGTaGACTCATCCATGCTGCGTT +
Preference number: 4 (lower is better)
Translates to: RQPLHLKTLQLALIQEPRQEWMQ*THPCCV
Trigger: AACGCAGCATGGATGAGTTCACTGCATCCACTCCTG...TCGGGGCTCTTGTATCAGTGCCAGCTGTAATGTTTTTAAATGCAGTGGCTGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR TCA 90 bp GCACCTGGCTGGCATGACAACAGTGGCTCAACATACACAGCAGTTGCACTAACATACTCAGTATATACATaGGGGCAGCTGTACAGAGGG +
Preference number: 4 (lower is better)
Translates to: APGWHDNSGSTYTAVALTYSVYT*GQLYRG
Trigger: CCCTCTGTACAGCTGCCCTCATGTATATACTGAGTA...TGTTAGTGCAACTGCTGTGTATGTTGAGCCACTGTTGTCATGCCAGCCAGGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298767.10
ENST00000372075.2
CDS-3UTR TCA 90 bp GCCTTTGCACCTGGCTGGCATGACAACAGTGGCTCAACATACACAGCAGTTGCATTAGTTACATTCTGGTaGGGCAGAGGCTTACTGTCA +
Preference number: 4 (lower is better)
Translates to: AFAPGWHDNSGSTYTAVALVTFW*GRGLLS
Trigger: TGACAGTAAGCCTCTGCCTCACCAGAATGTAACTAA...TGCAACTGCTGTGTATGTTGAGCCACTGTTGTCATGCCAGCCAGGTGCAAAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298767.10
ENST00000372075.2
CDS-3UTR GCA 90 bp GCACCTGGCTGGCATGACAACAGTGGCTCAACATACACAGCAGTTGCACTAACATGTCAGCTAAGCATATaGTGTCCTCAGCACGGTTGT +
Preference number: 4 (lower is better)
Translates to: APGWHDNSGSTYTAVALTCQLSI*CPQHGC
Trigger: ACAACCGTGCTGAGGACAGCATATGCTTAGCTGACA...TGTTAGTGCAACTGCTGTGTATGTTGAGCCACTGTTGTCATGCCAGCCAGGTGC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298767.10
ENST00000372075.2
CDS-3UTR GCA 90 bp GCACCTGGCTGGCATGACAACAGTGGCTCAACATACACAGCAGTTGCACTAACACATGCAGTCCTCCACTaGTTTGCCTACATGGTTAGT +
Preference number: 4 (lower is better)
Translates to: APGWHDNSGSTYTAVALTHAVLH*FAYMVS
Trigger: ACTAACCATGTAGGCAAAGCAGTGGAGGACTGCATG...TGTTAGTGCAACTGCTGTGTATGTTGAGCCACTGTTGTCATGCCAGCCAGGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298767.10
ENST00000372075.2
CDS-3UTR GCA 90 bp GCACCTGGCTGGCATGACAACAGTGGCTCAACATACACAGCAGTTGCACTAACAGCTCTCCTGTTTTGGTaGTGCCCCACTCATTATCAT +
Preference number: 4 (lower is better)
Translates to: APGWHDNSGSTYTAVALTALLFW*CPTHYH
Trigger: ATGATAATGAGTGGGGCAGCACCAAAACAGGAGAGC...TGTTAGTGCAACTGCTGTGTATGTTGAGCCACTGTTGTCATGCCAGCCAGGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298767.10
ENST00000372075.2
CDS-3UTR GCA 90 bp AGGCAGCCACTGCATTTAAAAACATTACAGCTGGCACTGATACAAGAGCCCCGACCTATGAGACCGTCCTaGTCTCCTGTTTTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: RQPLHLKTLQLALIQEPRPMRPS*SPVLVL
Trigger: CAGCACCAAAACAGGAGAGCAGGACGGTCTCATAGG...TCGGGGCTCTTGTATCAGTGCCAGCTGTAATGTTTTTAAATGCAGTGGCTGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR GCA 90 bp GCACCTGGCTGGCATGACAACAGTGGCTCAACATACACAGCAGTTGCACTAACATGTAGGAGGCCACAATaGAATCCTCCATGTGTTTGC +
Preference number: 4 (lower is better)
Translates to: APGWHDNSGSTYTAVALTCRRPQ*NPPCVC
Trigger: GCAAACACATGGAGGATTGCATTGTGGCCTCCTACA...TGTTAGTGCAACTGCTGTGTATGTTGAGCCACTGTTGTCATGCCAGCCAGGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298767.10
ENST00000372075.2
CDS-3UTR CCA 90 bp AGGCAGCCACTGCATTTAAAAACATTACAGCTGGCACTGATACAAGAGCCCCGAGCTTCCGCCGGTGAATaGTCAGTGCTGGAGTTTGAA +
Preference number: 4 (lower is better)
Translates to: RQPLHLKTLQLALIQEPRASAGE*SVLEFE
Trigger: TTCAAACTCCAGCACTGACCATTCACCGGCGGAAGC...TCGGGGCTCTTGTATCAGTGCCAGCTGTAATGTTTTTAAATGCAGTGGCTGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR CCA 90 bp GCCTTTGCACCTGGCTGGCATGACAACAGTGGCTCAACATACACAGCAGTTGCACAGTTTTTATCACTTTaGATGGTGGTGCAGGAGCCT +
Preference number: 4 (lower is better)
Translates to: AFAPGWHDNSGSTYTAVAQFLSL*MVVQEP
Trigger: AGGCTCCTGCACCACCATCCAAAGTGATAAAAACTG...TGCAACTGCTGTGTATGTTGAGCCACTGTTGTCATGCCAGCCAGGTGCAAAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR CCA 90 bp GCCTTTGCACCTGGCTGGCATGACAACAGTGGCTCAACATACACAGCAGTTGCATTGATTGGACTTTCCTaGCAGAGACACCCAAGAAGT +
Preference number: 4 (lower is better)
Translates to: AFAPGWHDNSGSTYTAVALIGLS*QRHPRS
Trigger: ACTTCTTGGGTGTCTCTGCCAGGAAAGTCCAATCAA...TGCAACTGCTGTGTATGTTGAGCCACTGTTGTCATGCCAGCCAGGTGCAAAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298767.10
ENST00000372075.2
CDS-3UTR TCA 90 bp AGGCAGCCACTGCATTTAAAAACATTACAGCTGGCACTGATACAAGAGCCCCGACCACTCTTATCATGCTaGGTGGTGGGAGCATCTTTG +
Preference number: 4 (lower is better)
Translates to: RQPLHLKTLQLALIQEPRPLLSC*VVGASL
Trigger: CAAAGATGCTCCCACCACTCAGCATGATAAGAGTGG...TCGGGGCTCTTGTATCAGTGCCAGCTGTAATGTTTTTAAATGCAGTGGCTGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR TCA 90 bp GCCTTTGCACCTGGCTGGCATGACAACAGTGGCTCAACATACACAGCAGTTGCAATCAGTCTTTTCAGTTaGCACCCACTGTATTTCTCC +
Preference number: 4 (lower is better)
Translates to: AFAPGWHDNSGSTYTAVAISLFS*HPLYFS
Trigger: GGAGAAATACAGTGGGTGTCAACTGAAAAGACTGAT...TGCAACTGCTGTGTATGTTGAGCCACTGTTGTCATGCCAGCCAGGTGCAAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298767.10
ENST00000372075.2
CDS-3UTR TCA 90 bp GCACCTGGCTGGCATGACAACAGTGGCTCAACATACACAGCAGTTGCACTAACAGCTGAAGGGCTTTATTaGGGTCAAGTTCTTCATCCT +
Preference number: 4 (lower is better)
Translates to: APGWHDNSGSTYTAVALTAEGLY*GQVLHP
Trigger: AGGATGAAGAACTTGACCTCAATAAAGCCCTTCAGC...TGTTAGTGCAACTGCTGTGTATGTTGAGCCACTGTTGTCATGCCAGCCAGGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298767.10
ENST00000372075.2
CDS-3UTR TCA 90 bp GCCTTTGCACCTGGCTGGCATGACAACAGTGGCTCAACATACACAGCAGTTGCACATCTCTGTCATTATTaGAAAGTCTCCTTCTGGCAG +
Preference number: 4 (lower is better)
Translates to: AFAPGWHDNSGSTYTAVAHLCHY*KVSFWQ
Trigger: CTGCCAGAAGGAGACTTTTCAATAATGACAGAGATG...TGCAACTGCTGTGTATGTTGAGCCACTGTTGTCATGCCAGCCAGGTGCAAAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298767.10
ENST00000372075.2
CDS-3UTR TCA 90 bp GCACCTGGCTGGCATGACAACAGTGGCTCAACATACACAGCAGTTGCACTAACAAAACTACCCTGGGTTTaGCTATTTTGCCTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: APGWHDNSGSTYTAVALTKLPWV*LFCLLL
Trigger: AAGGAGGAGGCAAAATAGTCAAACCCAGGGTAGTTT...TGTTAGTGCAACTGCTGTGTATGTTGAGCCACTGTTGTCATGCCAGCCAGGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR TCA 90 bp AGGCAGCCACTGCATTTAAAAACATTACAGCTGGCACTGATACAAGAGCCCCGACATTACAGCTGGCACTaGTACAAGAGCCCCGATTTG +
Preference number: 4 (lower is better)
Translates to: RQPLHLKTLQLALIQEPRHYSWH*YKSPDL
Trigger: CAAATCGGGGCTCTTGTATCAGTGCCAGCTGTAATG...TCGGGGCTCTTGTATCAGTGCCAGCTGTAATGTTTTTAAATGCAGTGGCTGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR CCA 90 bp GCACCTGGCTGGCATGACAACAGTGGCTCAACATACACAGCAGTTGCACTAACACGTCCTACAGTTGGTTaGCCTAAGAACACTTTGTAC +
Preference number: 4 (lower is better)
Translates to: APGWHDNSGSTYTAVALTRPTVG*PKNTLY
Trigger: GTACAAAGTGTTCTTAGGCCAACCAACTGTAGGACG...TGTTAGTGCAACTGCTGTGTATGTTGAGCCACTGTTGTCATGCCAGCCAGGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR CCA 90 bp GCACCTGGCTGGCATGACAACAGTGGCTCAACATACACAGCAGTTGCACTAACATTGATTGGACTTTCCTaGCAGAGACACCCAAGAAGT +
Preference number: 4 (lower is better)
Translates to: APGWHDNSGSTYTAVALTLIGLS*QRHPRS
Trigger: ACTTCTTGGGTGTCTCTGCCAGGAAAGTCCAATCAA...TGTTAGTGCAACTGCTGTGTATGTTGAGCCACTGTTGTCATGCCAGCCAGGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298767.10
ENST00000372075.2
CDS-3UTR CCA 90 bp GCCTTTGCACCTGGCTGGCATGACAACAGTGGCTCAACATACACAGCAGTTGCAAGTGGTTACATTGATTaGACTTTCCTGGCAGAGACA +
Preference number: 4 (lower is better)
Translates to: AFAPGWHDNSGSTYTAVASGYID*TFLAET
Trigger: TGTCTCTGCCAGGAAAGTCCAATCAATGTAACCACT...TGCAACTGCTGTGTATGTTGAGCCACTGTTGTCATGCCAGCCAGGTGCAAAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298767.10
ENST00000372075.2
CDS-3UTR CCA 90 bp GCCTTTGCACCTGGCTGGCATGACAACAGTGGCTCAACATACACAGCAGTTGCACTAGAGATAGATTTCTaGCCAGTTGTTCCAACAGCA +
Preference number: 4 (lower is better)
Translates to: AFAPGWHDNSGSTYTAVALEIDF*PVVPTA
Trigger: TGCTGTTGGAACAACTGGCCAGAAATCTATCTCTAG...TGCAACTGCTGTGTATGTTGAGCCACTGTTGTCATGCCAGCCAGGTGCAAAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298767.10
ENST00000372075.2
CDS-3UTR CCA 90 bp ACTACCCTGGGTTTGACTATTTTGCCTCCTCCTTTTAACAGGGCACATCATCTTGCCTTTGCACCTGGCTaGCATGACAACAGTGGCTCA +
Preference number: 4 (lower is better)
Translates to: TTLGLTILPPPFNRAHHLAFAPG*HDNSGS
Trigger: TGAGCCACTGTTGTCATGCCAGCCAGGTGCAAAGGC...AAGATGATGTGCCCTGTTAAAAGGAGGAGGCAAAATAGTCAAACCCAGGGTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR TCA 90 bp GCCTTTGCACCTGGCTGGCATGACAACAGTGGCTCAACATACACAGCAGTTGCAGACTTCATCGAATTTTaGACTGCCATTTCCACCTTT +
Preference number: 4 (lower is better)
Translates to: AFAPGWHDNSGSTYTAVADFIEF*TAISTF
Trigger: AAAGGTGGAAATGGCAGTTCAAAATTCGATGAAGTC...TGCAACTGCTGTGTATGTTGAGCCACTGTTGTCATGCCAGCCAGGTGCAAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR TCA 90 bp GCCTTTGCACCTGGCTGGCATGACAACAGTGGCTCAACATACACAGCAGTTGCACATCTTCGCTTTCACTaGGATCATCAAAGCCAAAAT +
Preference number: 4 (lower is better)
Translates to: AFAPGWHDNSGSTYTAVAHLRFH*DHQSQN
Trigger: ATTTTGGCTTTGATGATCTCAGTGAAAGCGAAGATG...TGCAACTGCTGTGTATGTTGAGCCACTGTTGTCATGCCAGCCAGGTGCAAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR TCA 90 bp GCACCTGGCTGGCATGACAACAGTGGCTCAACATACACAGCAGTTGCACTAACATTGTTAGTACCAGACTaGCTGTCCTGGGAATTATCA +
Preference number: 4 (lower is better)
Translates to: APGWHDNSGSTYTAVALTLLVPD*LSWELS
Trigger: TGATAATTCCCAGGACAGTCAGTCTGGTACTAACAA...TGTTAGTGCAACTGCTGTGTATGTTGAGCCACTGTTGTCATGCCAGCCAGGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR TCA 90 bp GCCTTTGCACCTGGCTGGCATGACAACAGTGGCTCAACATACACAGCAGTTGCATCTTCTGAATCTGGATaGTTCCAATGTCTGGCATTA +
Preference number: 4 (lower is better)
Translates to: AFAPGWHDNSGSTYTAVASSESG*FQCLAL
Trigger: TAATGCCAGACATTGGAATCATCCAGATTCAGAAGA...TGCAACTGCTGTGTATGTTGAGCCACTGTTGTCATGCCAGCCAGGTGCAAAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR TCA 90 bp GCACCTGGCTGGCATGACAACAGTGGCTCAACATACACAGCAGTTGCACTAACAATTCTACAACATCGTTaGAGTGCTTCACGTGCTGAA +
Preference number: 4 (lower is better)
Translates to: APGWHDNSGSTYTAVALTILQHR*SASRAE
Trigger: TTCAGCACGTGAAGCACTTCAACGATGTTGTAGAAT...TGTTAGTGCAACTGCTGTGTATGTTGAGCCACTGTTGTCATGCCAGCCAGGTGC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR TCA 90 bp GCACCTGGCTGGCATGACAACAGTGGCTCAACATACACAGCAGTTGCACTAACAATCAGTCTTTTCAGTTaGCACCCACTGTATTTCTCC +
Preference number: 4 (lower is better)
Translates to: APGWHDNSGSTYTAVALTISLFS*HPLYFS
Trigger: GGAGAAATACAGTGGGTGTCAACTGAAAAGACTGAT...TGTTAGTGCAACTGCTGTGTATGTTGAGCCACTGTTGTCATGCCAGCCAGGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298767.10
ENST00000372075.2
CDS-3UTR GCA 90 bp AGGCAGCCACTGCATTTAAAAACATTACAGCTGGCACTGATACAAGAGCCCCGAAGCTTCTCCCAAATCTaGAGGAGTGGATGCAGTGAA +
Preference number: 4 (lower is better)
Translates to: RQPLHLKTLQLALIQEPRSFSQI*RSGCSE
Trigger: TTCACTGCATCCACTCCTGCAGATTTGGGAGAAGCT...TCGGGGCTCTTGTATCAGTGCCAGCTGTAATGTTTTTAAATGCAGTGGCTGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR GCA 90 bp AGGCAGCCACTGCATTTAAAAACATTACAGCTGGCACTGATACAAGAGCCCCGAGCTCTCCTGTTTTGGTaGTGCCCCACTCATTATCAT +
Preference number: 4 (lower is better)
Translates to: RQPLHLKTLQLALIQEPRALLFW*CPTHYH
Trigger: ATGATAATGAGTGGGGCAGCACCAAAACAGGAGAGC...TCGGGGCTCTTGTATCAGTGCCAGCTGTAATGTTTTTAAATGCAGTGGCTGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR TCA 90 bp GCACCTGGCTGGCATGACAACAGTGGCTCAACATACACAGCAGTTGCACTAACAGAATTGTTAACAGCCTaGACCTTTTCCCCTCATTTT +
Preference number: 4 (lower is better)
Translates to: APGWHDNSGSTYTAVALTELLTA*TFSPHF
Trigger: AAAATGAGGGGAAAAGGTTCAGGCTGTTAACAATTC...TGTTAGTGCAACTGCTGTGTATGTTGAGCCACTGTTGTCATGCCAGCCAGGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298767.10
ENST00000372075.2
CDS-3UTR TCA 90 bp GCCTTTGCACCTGGCTGGCATGACAACAGTGGCTCAACATACACAGCAGTTGCAAAATGCAGAGTTCTCTaGGGGTTAAAAACACACAAA +
Preference number: 4 (lower is better)
Translates to: AFAPGWHDNSGSTYTAVAKCRVL*GLKTHK
Trigger: TTTGTGTGTTTTTAACCCTCAGAGAACTCTGCATTT...TGCAACTGCTGTGTATGTTGAGCCACTGTTGTCATGCCAGCCAGGTGCAAAGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR GCA 90 bp GATACTGATGAATGTTCTTGGTATATCTTCAAGGACTTCTTTCATGACTTGACTCATCTCAACGCCATTTaGGCTCCCGGCCCCCACCTC +
Preference number: 4 (lower is better)
Translates to: DTDECSWYIFKDFFHDLTHLNAI*APGPHL
Trigger: GAGGTGGGGGCCGGGAGCGCAAATGGCGTTGAGATG...AGTCAAGTCATGAAAGAAGTCCTTGAAGATATACCAAGAACATTCATCAGTATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR GCA 90 bp GCACCTGGCTGGCATGACAACAGTGGCTCAACATACACAGCAGTTGCACTAACAAGCCACTGTAGTTTCTaGATTGGGTTTCTTAGTACT +
Preference number: 4 (lower is better)
Translates to: APGWHDNSGSTYTAVALTSHCSF*IGFLST
Trigger: AGTACTAAGAAACCCAATGCAGAAACTACAGTGGCT...TGTTAGTGCAACTGCTGTGTATGTTGAGCCACTGTTGTCATGCCAGCCAGGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR GCA 90 bp AGGCAGCCACTGCATTTAAAAACATTACAGCTGGCACTGATACAAGAGCCCCGATACACCCCCTTTCTTTaGCTGATTCAGGCCATCTTT +
Preference number: 4 (lower is better)
Translates to: RQPLHLKTLQLALIQEPRYTPFL*LIQAIF
Trigger: AAAGATGGCCTGAATCAGGCAAAGAAAGGGGGTGTA...TCGGGGCTCTTGTATCAGTGCCAGCTGTAATGTTTTTAAATGCAGTGGCTGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR GCA 90 bp ACTACCCTGGGTTTGACTATTTTGCCTCCTCCTTTTAACAGGGCACATCATCTTCCTGGGAATTATCATTaGTTTCTGGGGGAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: TTLGLTILPPPFNRAHHLPGNYH*FLGEAA
Trigger: TGCAGCCTCCCCCAGAAAGCAATGATAATTCCCAGG...AAGATGATGTGCCCTGTTAAAAGGAGGAGGCAAAATAGTCAAACCCAGGGTAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR GCA 90 bp GCCTTTGCACCTGGCTGGCATGACAACAGTGGCTCAACATACACAGCAGTTGCAAGCAATTTAAGGCTTTaGGCTTATGCAATTGATCCT +
Preference number: 4 (lower is better)
Translates to: AFAPGWHDNSGSTYTAVASNLRL*AYAIDP
Trigger: AGGATCAATTGCATAAGCGCAAAGCCTTAAATTGCT...TGCAACTGCTGTGTATGTTGAGCCACTGTTGTCATGCCAGCCAGGTGCAAAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR CCA 90 bp GCCTTTGCACCTGGCTGGCATGACAACAGTGGCTCAACATACACAGCAGTTGCACTCCTTGTTTATTTATaGGCTTCTTCACACTTTCAG +
Preference number: 4 (lower is better)
Translates to: AFAPGWHDNSGSTYTAVALLVYL*ASSHFQ
Trigger: CTGAAAGTGTGAAGAAGCCCATAAATAAACAAGGAG...TGCAACTGCTGTGTATGTTGAGCCACTGTTGTCATGCCAGCCAGGTGCAAAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR CCA 90 bp ACTACCCTGGGTTTGACTATTTTGCCTCCTCCTTTTAACAGGGCACATCATCTTCTGAGGTTTTACTACTaGTGGCCCAGGCAGTTCTTC +
Preference number: 4 (lower is better)
Translates to: TTLGLTILPPPFNRAHHLLRFYY*WPRQFF
Trigger: GAAGAACTGCCTGGGCCACCAGTAGTAAAACCTCAG...AAGATGATGTGCCCTGTTAAAAGGAGGAGGCAAAATAGTCAAACCCAGGGTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR CCA 90 bp GCCTTTGCACCTGGCTGGCATGACAACAGTGGCTCAACATACACAGCAGTTGCATTTCATTCAGTAGCTTaGCTGATGAAGCATCTTGTT +
Preference number: 4 (lower is better)
Translates to: AFAPGWHDNSGSTYTAVAFHSVA*LMKHLV
Trigger: AACAAGATGCTTCATCAGCCAAGCTACTGAATGAAA...TGCAACTGCTGTGTATGTTGAGCCACTGTTGTCATGCCAGCCAGGTGCAAAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298767.10
ENST00000372075.2
CDS-3UTR CCA 90 bp ACTACCCTGGGTTTGACTATTTTGCCTCCTCCTTTTAACAGGGCACATCATCTTCCTGCTCTCCTGTTTTaGTGCTGCCCCACTCATTAT +
Preference number: 4 (lower is better)
Translates to: TTLGLTILPPPFNRAHHLPALLF*CCPTHY
Trigger: ATAATGAGTGGGGCAGCACCAAAACAGGAGAGCAGG...AAGATGATGTGCCCTGTTAAAAGGAGGAGGCAAAATAGTCAAACCCAGGGTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR TCA 90 bp GCACCTGGCTGGCATGACAACAGTGGCTCAACATACACAGCAGTTGCACTAACAAGCTTCACTAGATTCTaGATAAGAGGAACACTTAAC +
Preference number: 4 (lower is better)
Translates to: APGWHDNSGSTYTAVALTSFTRF*IRGTLN
Trigger: GTTAAGTGTTCCTCTTATTCAGAATCTAGTGAAGCT...TGTTAGTGCAACTGCTGTGTATGTTGAGCCACTGTTGTCATGCCAGCCAGGTGC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR TCA 90 bp ACTACCCTGGGTTTGACTATTTTGCCTCCTCCTTTTAACAGGGCACATCATCTTGCACGGTTGTACTGCTaGATCAGTTCTTCACAATGC +
Preference number: 4 (lower is better)
Translates to: TTLGLTILPPPFNRAHHLARLYC*ISSSQC
Trigger: GCATTGTGAAGAACTGATTCAGCAGTACAACCGTGC...AAGATGATGTGCCCTGTTAAAAGGAGGAGGCAAAATAGTCAAACCCAGGGTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR TCA 90 bp ACTACCCTGGGTTTGACTATTTTGCCTCCTCCTTTTAACAGGGCACATCATCTTAAAGCCTGGACAGCATaGACTTGTCCACCTATCCTT +
Preference number: 4 (lower is better)
Translates to: TTLGLTILPPPFNRAHHLKAWTA*TCPPIL
Trigger: AAGGATAGGTGGACAAGTTCATGCTGTCCAGGCTTT...AAGATGATGTGCCCTGTTAAAAGGAGGAGGCAAAATAGTCAAACCCAGGGTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR TCA 90 bp TTAAGAGCCTCCCTAGCATTAAGTGTAAACTACCCTGGGTTTGACTATTTTGCCTGTTTGCCGGCATGCTaGAGGGCTTTATTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: LRASLALSVNYPGFDYFACLPAC*RALLRS
Trigger: TGACCTCAATAAAGCCCTTCAGCATGCCGGCAAACA...GGCAAAATAGTCAAACCCAGGGTAGTTTACACTTAATGCTAGGGAGGCTCTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR TCA 90 bp ACTACCCTGGGTTTGACTATTTTGCCTCCTCCTTTTAACAGGGCACATCATCTTGCACAGTGGTTACATTaGTTGGACTTTCCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: TTLGLTILPPPFNRAHHLAQWLH*LDFPGR
Trigger: TCTGCCAGGAAAGTCCAATCAATGTAACCACTGTGC...AAGATGATGTGCCCTGTTAAAAGGAGGAGGCAAAATAGTCAAACCCAGGGTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR GCA 90 bp GCACCTGGCTGGCATGACAACAGTGGCTCAACATACACAGCAGTTGCACTAACAAAATTGGGCCTCTTCTaGCCTAATTTAGCCATAAAT +
Preference number: 4 (lower is better)
Translates to: APGWHDNSGSTYTAVALTKLGLF*PNLAIN
Trigger: ATTTATGGCTAAATTAGGGCAGAAGAGGCCCAATTT...TGTTAGTGCAACTGCTGTGTATGTTGAGCCACTGTTGTCATGCCAGCCAGGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR GCA 90 bp ACTACCCTGGGTTTGACTATTTTGCCTCCTCCTTTTAACAGGGCACATCATCTTATCTGCAGGAGTGGATaGAGTGAACTCATCCATGCT +
Preference number: 4 (lower is better)
Translates to: TTLGLTILPPPFNRAHHLICRSG*SELIHA
Trigger: AGCATGGATGAGTTCACTGCATCCACTCCTGCAGAT...AAGATGATGTGCCCTGTTAAAAGGAGGAGGCAAAATAGTCAAACCCAGGGTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR GCA 90 bp ACTACCCTGGGTTTGACTATTTTGCCTCCTCCTTTTAACAGGGCACATCATCTTTGCTACCATCCCATGTaGTCTCAGGTGCATTCGAAA +
Preference number: 4 (lower is better)
Translates to: TTLGLTILPPPFNRAHHLCYHPM*SQVHSK
Trigger: TTTCGAATGCACCTGAGAGCACATGGGATGGTAGCA...AAGATGATGTGCCCTGTTAAAAGGAGGAGGCAAAATAGTCAAACCCAGGGTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR GCA 90 bp GCACCTGGCTGGCATGACAACAGTGGCTCAACATACACAGCAGTTGCACTAACAGTCTCCATAGCTAAATaGCCAGTCGTTATATTTTCT +
Preference number: 4 (lower is better)
Translates to: APGWHDNSGSTYTAVALTVSIAK*PVVIFS
Trigger: AGAAAATATAACGACTGGGCATTTAGCTATGGAGAC...TGTTAGTGCAACTGCTGTGTATGTTGAGCCACTGTTGTCATGCCAGCCAGGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298767.10
ENST00000372075.2
CDS-3UTR GCA 90 bp TTAAGAGCCTCCCTAGCATTAAGTGTAAACTACCCTGGGTTTGACTATTTTGCCAATCCTCCATGTGTTTaGCGGCATGCTGAAGGGCTT +
Preference number: 4 (lower is better)
Translates to: LRASLALSVNYPGFDYFANPPCV*RHAEGL
Trigger: AAGCCCTTCAGCATGCCGGCAAACACATGGAGGATT...GGCAAAATAGTCAAACCCAGGGTAGTTTACACTTAATGCTAGGGAGGCTCTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR CCA 90 bp AGGCAGCCACTGCATTTAAAAACATTACAGCTGGCACTGATACAAGAGCCCCGAGGCCTTTTCCCAAACTaGGAGTTCCAAGTATCATTT +
Preference number: 4 (lower is better)
Translates to: RQPLHLKTLQLALIQEPRGLFPN*EFQVSF
Trigger: AAATGATACTTGGAACTCCCAGTTTGGGAAAAGGCC...TCGGGGCTCTTGTATCAGTGCCAGCTGTAATGTTTTTAAATGCAGTGGCTGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR CCA 90 bp AGGCAGCCACTGCATTTAAAAACATTACAGCTGGCACTGATACAAGAGCCCCGATATCACTTTGGATGGTaGTGCAGGAGCCTTAAAAAC +
Preference number: 4 (lower is better)
Translates to: RQPLHLKTLQLALIQEPRYHFGW*CRSLKN
Trigger: GTTTTTAAGGCTCCTGCACCACCATCCAAAGTGATA...TCGGGGCTCTTGTATCAGTGCCAGCTGTAATGTTTTTAAATGCAGTGGCTGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR CCA 90 bp GCCTTTGCACCTGGCTGGCATGACAACAGTGGCTCAACATACACAGCAGTTGCAACAGGAATTCCACATTaGTGTTTTAGCTTCCTTATA +
Preference number: 4 (lower is better)
Translates to: AFAPGWHDNSGSTYTAVATGIPH*CFSFLI
Trigger: TATAAGGAAGCTAAAACACCAATGTGGAATTCCTGT...TGCAACTGCTGTGTATGTTGAGCCACTGTTGTCATGCCAGCCAGGTGCAAAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR TCA 90 bp ACTACCCTGGGTTTGACTATTTTGCCTCCTCCTTTTAACAGGGCACATCATCTTAAGACAGCCTCACTGTaGCACTCTGAGGTTTTACTA +
Preference number: 4 (lower is better)
Translates to: TTLGLTILPPPFNRAHHLKTASL*HSEVLL
Trigger: TAGTAAAACCTCAGAGTGTCACAGTGAGGCTGTCTT...AAGATGATGTGCCCTGTTAAAAGGAGGAGGCAAAATAGTCAAACCCAGGGTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR TCA 90 bp TTAAGAGCCTCCCTAGCATTAAGTGTAAACTACCCTGGGTTTGACTATTTTGCCCGTGTGTTTAGAGGCTaGGTGCTCTTTAAGCCACTT +
Preference number: 4 (lower is better)
Translates to: LRASLALSVNYPGFDYFARVFRG*VLFKPL
Trigger: AAGTGGCTTAAAGAGCACTCAGCCTCTAAACACACG...GGCAAAATAGTCAAACCCAGGGTAGTTTACACTTAATGCTAGGGAGGCTCTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR GCA 90 bp ACTACCCTGGGTTTGACTATTTTGCCTCCTCCTTTTAACAGGGCACATCATCTTATGTTGACAAGACAGTaGCGATTCCGAGCACTATAC +
Preference number: 4 (lower is better)
Translates to: TTLGLTILPPPFNRAHHLMLTRQ*RFRALY
Trigger: GTATAGTGCTCGGAATCGGCACTGTCTTGTCAACAT...AAGATGATGTGCCCTGTTAAAAGGAGGAGGCAAAATAGTCAAACCCAGGGTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR GCA 90 bp AGGCAGCCACTGCATTTAAAAACATTACAGCTGGCACTGATACAAGAGCCCCGAGTCTCCATAGCTAAATaGCCAGTCGTTATATTTTCT +
Preference number: 4 (lower is better)
Translates to: RQPLHLKTLQLALIQEPRVSIAK*PVVIFS
Trigger: AGAAAATATAACGACTGGGCATTTAGCTATGGAGAC...TCGGGGCTCTTGTATCAGTGCCAGCTGTAATGTTTTTAAATGCAGTGGCTGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR CCA 90 bp ACTACCCTGGGTTTGACTATTTTGCCTCCTCCTTTTAACAGGGCACATCATCTTAGGATTTCGTTTTATTaGCCCTACAGTACGTCCTAC +
Preference number: 4 (lower is better)
Translates to: TTLGLTILPPPFNRAHHLRISFY*PYSTSY
Trigger: GTAGGACGTACTGTAGGGCCAATAAAACGAAATCCT...AAGATGATGTGCCCTGTTAAAAGGAGGAGGCAAAATAGTCAAACCCAGGGTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR CCA 90 bp GATACTGATGAATGTTCTTGGTATATCTTCAAGGACTTCTTTCATGACTTGACTTTACTTTCTGCTAGCTaGGCTGCCCGCTCTCGCTCA +
Preference number: 4 (lower is better)
Translates to: DTDECSWYIFKDFFHDLTLLSAS*AARSRS
Trigger: TGAGCGAGAGCGGGCAGCCCAGCTAGCAGAAAGTAA...AGTCAAGTCATGAAAGAAGTCCTTGAAGATATACCAAGAACATTCATCAGTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298767.10
ENST00000372075.2
CDS-3UTR CCA 90 bp ACGAATGATACTGATGAATGTTCTTGGTATATCTTCAAGGACTTCTTTCATGACGCCTTTGCACCTGGCTaGCATGACAACAGTGGCTCA +
Preference number: 4 (lower is better)
Translates to: TNDTDECSWYIFKDFFHDAFAPG*HDNSGS
Trigger: TGAGCCACTGTTGTCATGCCAGCCAGGTGCAAAGGC...GTCATGAAAGAAGTCCTTGAAGATATACCAAGAACATTCATCAGTATCATTCGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298767.10
ENST00000372075.2
CDS-3UTR CCA 90 bp ACTACCCTGGGTTTGACTATTTTGCCTCCTCCTTTTAACAGGGCACATCATCTTCAAATACAATCTCAATaGTTCCCACGTTACACTGGC +
Preference number: 4 (lower is better)
Translates to: TTLGLTILPPPFNRAHHLQIQSQ*FPRYTG
Trigger: GCCAGTGTAACGTGGGAACCATTGAGATTGTATTTG...AAGATGATGTGCCCTGTTAAAAGGAGGAGGCAAAATAGTCAAACCCAGGGTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR TCA 90 bp TTAAGAGCCTCCCTAGCATTAAGTGTAAACTACCCTGGGTTTGACTATTTTGCCATTAGCTTCAAGTACTaGAGTGACCTCTTCCAACTG +
Preference number: 4 (lower is better)
Translates to: LRASLALSVNYPGFDYFAISFKY*SDLFQL
Trigger: CAGTTGGAAGAGGTCACTTCAGTACTTGAAGCTAAT...GGCAAAATAGTCAAACCCAGGGTAGTTTACACTTAATGCTAGGGAGGCTCTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR TCA 90 bp ACGAATGATACTGATGAATGTTCTTGGTATATCTTCAAGGACTTCTTTCATGACCAGAGGGACAGATTCTaGTGGTGCTGGGAATCATCC +
Preference number: 4 (lower is better)
Translates to: TNDTDECSWYIFKDFFHDQRDRF*WCWESS
Trigger: GGATGATTCCCAGCACCATCAGAATCTGTCCCTCTG...GTCATGAAAGAAGTCCTTGAAGATATACCAAGAACATTCATCAGTATCATTCGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR TCA 90 bp TTAAGAGCCTCCCTAGCATTAAGTGTAAACTACCCTGGGTTTGACTATTTTGCCCATCTCTGTCATTATTaGAAAGTCTCCTTCTGGCAG +
Preference number: 4 (lower is better)
Translates to: LRASLALSVNYPGFDYFAHLCHY*KVSFWQ
Trigger: CTGCCAGAAGGAGACTTTTCAATAATGACAGAGATG...GGCAAAATAGTCAAACCCAGGGTAGTTTACACTTAATGCTAGGGAGGCTCTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR TCA 90 bp GATACTGATGAATGTTCTTGGTATATCTTCAAGGACTTCTTTCATGACTTGACTTGCACCTGGCTGGCATaGCAACAGTGGCTCAACATA +
Preference number: 4 (lower is better)
Translates to: DTDECSWYIFKDFFHDLTCTWLA*QQWLNI
Trigger: TATGTTGAGCCACTGTTGTCATGCCAGCCAGGTGCA...AGTCAAGTCATGAAAGAAGTCCTTGAAGATATACCAAGAACATTCATCAGTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298767.10
ENST00000372075.2
CDS-3UTR GCA 90 bp TTAAGAGCCTCCCTAGCATTAAGTGTAAACTACCCTGGGTTTGACTATTTTGCCATATTCCTTACCATCTaGCACAAGTCAGGTTCACCA +
Preference number: 4 (lower is better)
Translates to: LRASLALSVNYPGFDYFAIFLTI*HKSGSP
Trigger: TGGTGAACCTGACTTGTGGCAGATGGTAAGGAATAT...GGCAAAATAGTCAAACCCAGGGTAGTTTACACTTAATGCTAGGGAGGCTCTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR CCA 90 bp GATACTGATGAATGTTCTTGGTATATCTTCAAGGACTTCTTTCATGACTTGACTGTGAATGGTCAGTGCTaGAGTTTGAACAGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: DTDECSWYIFKDFFHDLTVNGQC*SLNRAL
Trigger: CAGGGCCCTGTTCAAACTCCAGCACTGACCATTCAC...AGTCAAGTCATGAAAGAAGTCCTTGAAGATATACCAAGAACATTCATCAGTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR CCA 90 bp GATACTGATGAATGTTCTTGGTATATCTTCAAGGACTTCTTTCATGACTTGACTTGGCTAAGGCCTGACTaGTGCCGTCCATCAGCTTAT +
Preference number: 4 (lower is better)
Translates to: DTDECSWYIFKDFFHDLTWLRPD*CRPSAY
Trigger: ATAAGCTGATGGACGGCACCAGTCAGGCCTTAGCCA...AGTCAAGTCATGAAAGAAGTCCTTGAAGATATACCAAGAACATTCATCAGTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR CCA 90 bp AGGCAGCCACTGCATTTAAAAACATTACAGCTGGCACTGATACAAGAGCCCCGAGATGATTCCAATGTCTaGCATTATATACAGCTTTTG +
Preference number: 4 (lower is better)
Translates to: RQPLHLKTLQLALIQEPRDDSNV*HYIQLL
Trigger: CAAAAGCTGTATATAATGCCAGACATTGGAATCATC...TCGGGGCTCTTGTATCAGTGCCAGCTGTAATGTTTTTAAATGCAGTGGCTGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR CCA 90 bp AGGCAGCCACTGCATTTAAAAACATTACAGCTGGCACTGATACAAGAGCCCCGAAGAAAACAATTTGCCTaGAATCAGTTACTTCCTTAC +
Preference number: 4 (lower is better)
Translates to: RQPLHLKTLQLALIQEPRRKQFA*NQLLPY
Trigger: GTAAGGAAGTAACTGATTCCAGGCAAATTGTTTTCT...TCGGGGCTCTTGTATCAGTGCCAGCTGTAATGTTTTTAAATGCAGTGGCTGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR TCA 90 bp ACTACCCTGGGTTTGACTATTTTGCCTCCTCCTTTTAACAGGGCACATCATCTTATCTGGATGTCATTTTaGCACCAGTTTCATATTCTC +
Preference number: 4 (lower is better)
Translates to: TTLGLTILPPPFNRAHHLIWMSF*HQFHIL
Trigger: GAGAATATGAAACTGGTGTCAAAATGACATCCAGAT...AAGATGATGTGCCCTGTTAAAAGGAGGAGGCAAAATAGTCAAACCCAGGGTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR TCA 90 bp ACGAATGATACTGATGAATGTTCTTGGTATATCTTCAAGGACTTCTTTCATGACCCCCCTTTCTTTGCCTaGTTCAGGCCATCTTTACTC +
Preference number: 4 (lower is better)
Translates to: TNDTDECSWYIFKDFFHDPPFFA*FRPSLL
Trigger: GAGTAAAGATGGCCTGAATCAGGCAAAGAAAGGGGG...GTCATGAAAGAAGTCCTTGAAGATATACCAAGAACATTCATCAGTATCATTCGT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR TCA 90 bp ACTACCCTGGGTTTGACTATTTTGCCTCCTCCTTTTAACAGGGCACATCATCTTGTCTTTCTTTCTACTTaGCAGTCATCATCTTCATCA +
Preference number: 4 (lower is better)
Translates to: TTLGLTILPPPFNRAHHLVFLST*QSSSSS
Trigger: TGATGAAGATGATGACTGTCAAGTAGAAAGAAAGAC...AAGATGATGTGCCCTGTTAAAAGGAGGAGGCAAAATAGTCAAACCCAGGGTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR TCA 90 bp GATACTGATGAATGTTCTTGGTATATCTTCAAGGACTTCTTTCATGACTTGACTAGGCTGCAAGGAGGGTaGTGGAGCTGTTTTAGTTCT +
Preference number: 4 (lower is better)
Translates to: DTDECSWYIFKDFFHDLTRLQGG*WSCFSS
Trigger: AGAACTAAAACAGCTCCATCACCCTCCTTGCAGCCT...AGTCAAGTCATGAAAGAAGTCCTTGAAGATATACCAAGAACATTCATCAGTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR TCA 90 bp ACGAATGATACTGATGAATGTTCTTGGTATATCTTCAAGGACTTCTTTCATGACCTCACTGTGACACTCTaGGGTTTTACTACTGGTGGC +
Preference number: 4 (lower is better)
Translates to: TNDTDECSWYIFKDFFHDLTVTL*GFTTGG
Trigger: GCCACCAGTAGTAAAACCTCAGAGTGTCACAGTGAG...GTCATGAAAGAAGTCCTTGAAGATATACCAAGAACATTCATCAGTATCATTCGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR TCA 90 bp TTAAGAGCCTCCCTAGCATTAAGTGTAAACTACCCTGGGTTTGACTATTTTGCCACTTTATCTACAATATaGTCCAGACCACCCAAAAGC +
Preference number: 4 (lower is better)
Translates to: LRASLALSVNYPGFDYFATLSTI*SRPPKS
Trigger: GCTTTTGGGTGGTCTGGATCATATTGTAGATAAAGT...GGCAAAATAGTCAAACCCAGGGTAGTTTACACTTAATGCTAGGGAGGCTCTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR TCA 90 bp GATACTGATGAATGTTCTTGGTATATCTTCAAGGACTTCTTTCATGACTTGACTGCATTACCGAGCACCTaGAGCAAAGGTAAAGCAGCT +
Preference number: 4 (lower is better)
Translates to: DTDECSWYIFKDFFHDLTALPST*SKGKAA
Trigger: AGCTGCTTTACCTTTGCTTCAGGTGCTCGGTAATGC...AGTCAAGTCATGAAAGAAGTCCTTGAAGATATACCAAGAACATTCATCAGTATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298767.10
ENST00000372075.2
CDS-3UTR TCA 90 bp GATACTGATGAATGTTCTTGGTATATCTTCAAGGACTTCTTTCATGACTTGACTCAAATGCCGAATGCATaGCGAAGAAATCAGGTGGCC +
Preference number: 4 (lower is better)
Translates to: DTDECSWYIFKDFFHDLTQMPNA*RRNQVA
Trigger: GGCCACCTGATTTCTTCGTCATGCATTCGGCATTTG...AGTCAAGTCATGAAAGAAGTCCTTGAAGATATACCAAGAACATTCATCAGTATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298767.10
ENST00000372075.2
CDS-3UTR TCA 90 bp TTAAGAGCCTCCCTAGCATTAAGTGTAAACTACCCTGGGTTTGACTATTTTGCCTTGCGCTTATGCAATTaGTCCTGTCACTCTATAGAA +
Preference number: 4 (lower is better)
Translates to: LRASLALSVNYPGFDYFALRLCN*SCHSIE
Trigger: TTCTATAGAGTGACAGGATCAATTGCATAAGCGCAA...GGCAAAATAGTCAAACCCAGGGTAGTTTACACTTAATGCTAGGGAGGCTCTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR TCA 90 bp ACTACCCTGGGTTTGACTATTTTGCCTCCTCCTTTTAACAGGGCACATCATCTTTCCAATGAAGAAACATaGTGTAACTACCTGAAAGGT +
Preference number: 4 (lower is better)
Translates to: TTLGLTILPPPFNRAHHLSNEET*CNYLKG
Trigger: ACCTTTCAGGTAGTTACATCATGTTTCTTCATTGGA...AAGATGATGTGCCCTGTTAAAAGGAGGAGGCAAAATAGTCAAACCCAGGGTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR TCA 90 bp GATACTGATGAATGTTCTTGGTATATCTTCAAGGACTTCTTTCATGACTTGACTATGCACTGCAGTTGGTaGAGTGATTATCTCCCCCAC +
Preference number: 4 (lower is better)
Translates to: DTDECSWYIFKDFFHDLTMHCSW*SDYLPH
Trigger: GTGGGGGAGATAATCACTTCACCAACTGCAGTGCAT...AGTCAAGTCATGAAAGAAGTCCTTGAAGATATACCAAGAACATTCATCAGTATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR GCA 90 bp ACGAATGATACTGATGAATGTTCTTGGTATATCTTCAAGGACTTCTTTCATGACCTAAGGCCTGACTGGTaGCGTCCATCAGCTTATCAA +
Preference number: 4 (lower is better)
Translates to: TNDTDECSWYIFKDFFHDLRPDW*RPSAYQ
Trigger: TTGATAAGCTGATGGACGGCACCAGTCAGGCCTTAG...GTCATGAAAGAAGTCCTTGAAGATATACCAAGAACATTCATCAGTATCATTCGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR GCA 90 bp ACTACCCTGGGTTTGACTATTTTGCCTCCTCCTTTTAACAGGGCACATCATCTTTCGTCTGCATTTCAGTaGAGTAACTATATCTTGGTA +
Preference number: 4 (lower is better)
Translates to: TTLGLTILPPPFNRAHHLSSAFQ*SNYILV
Trigger: TACCAAGATATAGTTACTGCACTGAAATGCAGACGA...AAGATGATGTGCCCTGTTAAAAGGAGGAGGCAAAATAGTCAAACCCAGGGTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR GCA 90 bp TTAAGAGCCTCCCTAGCATTAAGTGTAAACTACCCTGGGTTTGACTATTTTGCCTGTTTAGAGGCTGAGTaGTCTTTAAGCCACTTAACA +
Preference number: 4 (lower is better)
Translates to: LRASLALSVNYPGFDYFACLEAE*SLSHLT
Trigger: TGTTAAGTGGCTTAAAGAGCACTCAGCCTCTAAACA...GGCAAAATAGTCAAACCCAGGGTAGTTTACACTTAATGCTAGGGAGGCTCTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR GCA 90 bp ACGAATGATACTGATGAATGTTCTTGGTATATCTTCAAGGACTTCTTTCATGACAATCCTCCATGTGTTTaGCGGCATGCTGAAGGGCTT +
Preference number: 4 (lower is better)
Translates to: TNDTDECSWYIFKDFFHDNPPCV*RHAEGL
Trigger: AAGCCCTTCAGCATGCCGGCAAACACATGGAGGATT...GTCATGAAAGAAGTCCTTGAAGATATACCAAGAACATTCATCAGTATCATTCGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298767.10
ENST00000372075.2
CDS-3UTR CCA 90 bp ACTACCCTGGGTTTGACTATTTTGCCTCCTCCTTTTAACAGGGCACATCATCTTGAGGAACACTTAACCTaGGCTAAATTCTTTGAAGAA +
Preference number: 4 (lower is better)
Translates to: TTLGLTILPPPFNRAHHLEEHLT*AKFFEE
Trigger: TTCTTCAAAGAATTTAGCCCAGGTTAAGTGTTCCTC...AAGATGATGTGCCCTGTTAAAAGGAGGAGGCAAAATAGTCAAACCCAGGGTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR CCA 90 bp TTAAGAGCCTCCCTAGCATTAAGTGTAAACTACCCTGGGTTTGACTATTTTGCCTTTTATCACTTTGGATaGTGGTGCAGGAGCCTTAAA +
Preference number: 4 (lower is better)
Translates to: LRASLALSVNYPGFDYFAFYHFG*WCRSLK
Trigger: TTTAAGGCTCCTGCACCACCATCCAAAGTGATAAAA...GGCAAAATAGTCAAACCCAGGGTAGTTTACACTTAATGCTAGGGAGGCTCTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR CCA 90 bp TTAAGAGCCTCCCTAGCATTAAGTGTAAACTACCCTGGGTTTGACTATTTTGCCGTTCCCACGTTACACTaGCGTACTATGTTCTTAAAA +
Preference number: 4 (lower is better)
Translates to: LRASLALSVNYPGFDYFAVPTLH*RTMFLK
Trigger: TTTTAAGAACATAGTACGCCAGTGTAACGTGGGAAC...GGCAAAATAGTCAAACCCAGGGTAGTTTACACTTAATGCTAGGGAGGCTCTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR TCA 90 bp TTAAGAGCCTCCCTAGCATTAAGTGTAAACTACCCTGGGTTTGACTATTTTGCCAAGTGCTTCACGTGCTaGACAACAGTATATAATTCT +
Preference number: 4 (lower is better)
Translates to: LRASLALSVNYPGFDYFAKCFTC*TTVYNS
Trigger: AGAATTATATACTGTTGTTCAGCACGTGAAGCACTT...GGCAAAATAGTCAAACCCAGGGTAGTTTACACTTAATGCTAGGGAGGCTCTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR TCA 90 bp GATACTGATGAATGTTCTTGGTATATCTTCAAGGACTTCTTTCATGACTTGACTTACTCAGTATATACATaGGGGCAGCTGTACAGAGGG +
Preference number: 4 (lower is better)
Translates to: DTDECSWYIFKDFFHDLTYSVYT*GQLYRG
Trigger: CCCTCTGTACAGCTGCCCTCATGTATATACTGAGTA...AGTCAAGTCATGAAAGAAGTCCTTGAAGATATACCAAGAACATTCATCAGTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298767.10
ENST00000372075.2
CDS-3UTR TCA 90 bp GATACTGATGAATGTTCTTGGTATATCTTCAAGGACTTCTTTCATGACTTGACTGCACGGTTGTACTGCTaGATCAGTTCTTCACAATGC +
Preference number: 4 (lower is better)
Translates to: DTDECSWYIFKDFFHDLTARLYC*ISSSQC
Trigger: GCATTGTGAAGAACTGATTCAGCAGTACAACCGTGC...AGTCAAGTCATGAAAGAAGTCCTTGAAGATATACCAAGAACATTCATCAGTATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298767.10
ENST00000372075.2
CDS-3UTR TCA 90 bp ACGAATGATACTGATGAATGTTCTTGGTATATCTTCAAGGACTTCTTTCATGACTCAAATCTCTGCTCCTaGGGTAGGTACTTTGGAACC +
Preference number: 4 (lower is better)
Translates to: TNDTDECSWYIFKDFFHDSNLCS*GRYFGT
Trigger: GGTTCCAAAGTACCTACCTCAGGAGCAGAGATTTGA...GTCATGAAAGAAGTCCTTGAAGATATACCAAGAACATTCATCAGTATCATTCGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298767.10
ENST00000372075.2
CDS-3UTR TCA 90 bp ACGAATGATACTGATGAATGTTCTTGGTATATCTTCAAGGACTTCTTTCATGACACGATGTTTCCATGTTaGCAAGACAGTGCCGATTCC +
Preference number: 4 (lower is better)
Translates to: TNDTDECSWYIFKDFFHDTMFPC*QDSADS
Trigger: GGAATCGGCACTGTCTTGTCAACATGGAAACATCGT...GTCATGAAAGAAGTCCTTGAAGATATACCAAGAACATTCATCAGTATCATTCGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR TCA 90 bp ACGAATGATACTGATGAATGTTCTTGGTATATCTTCAAGGACTTCTTTCATGACGCACAGTGGTTACATTaGTTGGACTTTCCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: TNDTDECSWYIFKDFFHDAQWLH*LDFPGR
Trigger: TCTGCCAGGAAAGTCCAATCAATGTAACCACTGTGC...GTCATGAAAGAAGTCCTTGAAGATATACCAAGAACATTCATCAGTATCATTCGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298767.10
ENST00000372075.2
CDS-3UTR GCA 90 bp GATACTGATGAATGTTCTTGGTATATCTTCAAGGACTTCTTTCATGACTTGACTCACTTTGGATGGTGGTaGAGGAGCCTTAAAAACTCC +
Preference number: 4 (lower is better)
Translates to: DTDECSWYIFKDFFHDLTHFGWW*RSLKNS
Trigger: GGAGTTTTTAAGGCTCCTGCACCACCATCCAAAGTG...AGTCAAGTCATGAAAGAAGTCCTTGAAGATATACCAAGAACATTCATCAGTATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR GCA 90 bp ACTACCCTGGGTTTGACTATTTTGCCTCCTCCTTTTAACAGGGCACATCATCTTATCAGTTCTTCACAATaGTGTAATGCTTTAGCTGAT +
Preference number: 4 (lower is better)
Translates to: TTLGLTILPPPFNRAHHLISSSQ*CNALAD
Trigger: ATCAGCTAAAGCATTACAGCATTGTGAAGAACTGAT...AAGATGATGTGCCCTGTTAAAAGGAGGAGGCAAAATAGTCAAACCCAGGGTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR GCA 90 bp ACGAATGATACTGATGAATGTTCTTGGTATATCTTCAAGGACTTCTTTCATGACTGTCAGCTAAGCATATaGTGTCCTCAGCACGGTTGT +
Preference number: 4 (lower is better)
Translates to: TNDTDECSWYIFKDFFHDCQLSI*CPQHGC
Trigger: ACAACCGTGCTGAGGACAGCATATGCTTAGCTGACA...GTCATGAAAGAAGTCCTTGAAGATATACCAAGAACATTCATCAGTATCATTCGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298767.10
ENST00000372075.2
CDS-3UTR GCA 90 bp ACGAATGATACTGATGAATGTTCTTGGTATATCTTCAAGGACTTCTTTCATGACCATGCAGTCCTCCACTaGTTTGCCTACATGGTTAGT +
Preference number: 4 (lower is better)
Translates to: TNDTDECSWYIFKDFFHDHAVLH*FAYMVS
Trigger: ACTAACCATGTAGGCAAAGCAGTGGAGGACTGCATG...GTCATGAAAGAAGTCCTTGAAGATATACCAAGAACATTCATCAGTATCATTCGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298767.10
ENST00000372075.2
CDS-3UTR GCA 90 bp GATACTGATGAATGTTCTTGGTATATCTTCAAGGACTTCTTTCATGACTTGACTTGTAGGAGGCCACAATaGAATCCTCCATGTGTTTGC +
Preference number: 4 (lower is better)
Translates to: DTDECSWYIFKDFFHDLTCRRPQ*NPPCVC
Trigger: GCAAACACATGGAGGATTGCATTGTGGCCTCCTACA...AGTCAAGTCATGAAAGAAGTCCTTGAAGATATACCAAGAACATTCATCAGTATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298767.10
ENST00000372075.2
CDS-3UTR CCA 90 bp ACTACCCTGGGTTTGACTATTTTGCCTCCTCCTTTTAACAGGGCACATCATCTTAAATTTGATGCTCCTTaGGAGGATTTCGTTTTATTG +
Preference number: 4 (lower is better)
Translates to: TTLGLTILPPPFNRAHHLKFDAP*EDFVLL
Trigger: CAATAAAACGAAATCCTCCCAAGGAGCATCAAATTT...AAGATGATGTGCCCTGTTAAAAGGAGGAGGCAAAATAGTCAAACCCAGGGTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR TCA 90 bp GATACTGATGAATGTTCTTGGTATATCTTCAAGGACTTCTTTCATGACTTGACTTTAGTTACATTCTGGTaGGGCAGAGGCTTACTGTCA +
Preference number: 4 (lower is better)
Translates to: DTDECSWYIFKDFFHDLTLVTFW*GRGLLS
Trigger: TGACAGTAAGCCTCTGCCTCACCAGAATGTAACTAA...AGTCAAGTCATGAAAGAAGTCCTTGAAGATATACCAAGAACATTCATCAGTATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298767.10
ENST00000372075.2
CDS-3UTR TCA 90 bp ACGAATGATACTGATGAATGTTCTTGGTATATCTTCAAGGACTTCTTTCATGACGCTGAAGGGCTTTATTaGGGTCAAGTTCTTCATCCT +
Preference number: 4 (lower is better)
Translates to: TNDTDECSWYIFKDFFHDAEGLY*GQVLHP
Trigger: AGGATGAAGAACTTGACCTCAATAAAGCCCTTCAGC...GTCATGAAAGAAGTCCTTGAAGATATACCAAGAACATTCATCAGTATCATTCGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298767.10
ENST00000372075.2
CDS-3UTR TCA 90 bp ACGAATGATACTGATGAATGTTCTTGGTATATCTTCAAGGACTTCTTTCATGACAAATGCAGTTCGCCCTaGTTGTTCTCATCCAAATGT +
Preference number: 4 (lower is better)
Translates to: TNDTDECSWYIFKDFFHDKCSSP*LFSSKC
Trigger: ACATTTGGATGAGAACAATCAGGGCGAACTGCATTT...GTCATGAAAGAAGTCCTTGAAGATATACCAAGAACATTCATCAGTATCATTCGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR GCA 90 bp ACGAATGATACTGATGAATGTTCTTGGTATATCTTCAAGGACTTCTTTCATGACGGTTTTAAAGACCATTaGTACCATCCCATGTGCTCT +
Preference number: 4 (lower is better)
Translates to: TNDTDECSWYIFKDFFHDGFKDH*YHPMCS
Trigger: AGAGCACATGGGATGGTAGCAATGGTCTTTAAAACC...GTCATGAAAGAAGTCCTTGAAGATATACCAAGAACATTCATCAGTATCATTCGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR GCA 90 bp ACGAATGATACTGATGAATGTTCTTGGTATATCTTCAAGGACTTCTTTCATGACTCTCCACTTGTTTCTTaGCACTCTCCACTCTTATCA +
Preference number: 4 (lower is better)
Translates to: TNDTDECSWYIFKDFFHDSPLVS*HSPLLS
Trigger: TGATAAGAGTGGAGAGTGGCAAGAAACAAGTGGAGA...GTCATGAAAGAAGTCCTTGAAGATATACCAAGAACATTCATCAGTATCATTCGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298767.10
ENST00000372075.2
CDS-3UTR CCA 90 bp GATACTGATGAATGTTCTTGGTATATCTTCAAGGACTTCTTTCATGACTTGACTAGTGGTTACATTGATTaGACTTTCCTGGCAGAGACA +
Preference number: 4 (lower is better)
Translates to: DTDECSWYIFKDFFHDLTSGYID*TFLAET
Trigger: TGTCTCTGCCAGGAAAGTCCAATCAATGTAACCACT...AGTCAAGTCATGAAAGAAGTCCTTGAAGATATACCAAGAACATTCATCAGTATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298767.10
ENST00000372075.2
CDS-3UTR CCA 90 bp ACGAATGATACTGATGAATGTTCTTGGTATATCTTCAAGGACTTCTTTCATGACCTAGAGATAGATTTCTaGCCAGTTGTTCCAACAGCA +
Preference number: 4 (lower is better)
Translates to: TNDTDECSWYIFKDFFHDLEIDF*PVVPTA
Trigger: TGCTGTTGGAACAACTGGCCAGAAATCTATCTCTAG...GTCATGAAAGAAGTCCTTGAAGATATACCAAGAACATTCATCAGTATCATTCGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298767.10
ENST00000372075.2
CDS-3UTR TCA 90 bp GATACTGATGAATGTTCTTGGTATATCTTCAAGGACTTCTTTCATGACTTGACTCAGCTTATCAAAATTTaGTGCTCCTTGGGAGGATTT +
Preference number: 4 (lower is better)
Translates to: DTDECSWYIFKDFFHDLTQLIKI*CSLGGF
Trigger: AAATCCTCCCAAGGAGCATCAAATTTTGATAAGCTG...AGTCAAGTCATGAAAGAAGTCCTTGAAGATATACCAAGAACATTCATCAGTATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR TCA 90 bp ACGAATGATACTGATGAATGTTCTTGGTATATCTTCAAGGACTTCTTTCATGACACTTTATCTACAATATaGTCCAGACCACCCAAAAGC +
Preference number: 4 (lower is better)
Translates to: TNDTDECSWYIFKDFFHDTLSTI*SRPPKS
Trigger: GCTTTTGGGTGGTCTGGATCATATTGTAGATAAAGT...GTCATGAAAGAAGTCCTTGAAGATATACCAAGAACATTCATCAGTATCATTCGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298767.10
ENST00000372075.2
CDS-3UTR GCA 90 bp GATACTGATGAATGTTCTTGGTATATCTTCAAGGACTTCTTTCATGACTTGACTTTTAAACCAGTCTCCTaGTCGTTTAGAAGTAAGGGA +
Preference number: 4 (lower is better)
Translates to: DTDECSWYIFKDFFHDLTFKPVS*SFRSKG
Trigger: TCCCTTACTTCTAAACGAGCAGGAGACTGGTTTAAA...AGTCAAGTCATGAAAGAAGTCCTTGAAGATATACCAAGAACATTCATCAGTATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298767.10
ENST00000372075.2
CDS-3UTR GCA 90 bp GATACTGATGAATGTTCTTGGTATATCTTCAAGGACTTCTTTCATGACTTGACTTTAGCAAATGCCGAATaGATGACGAAGAAATCAGGT +
Preference number: 4 (lower is better)
Translates to: DTDECSWYIFKDFFHDLTLANAE*MTKKSG
Trigger: ACCTGATTTCTTCGTCATGCATTCGGCATTTGCTAA...AGTCAAGTCATGAAAGAAGTCCTTGAAGATATACCAAGAACATTCATCAGTATC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298767.10
ENST00000372075.2
CDS-3UTR TCA 90 bp ACGAATGATACTGATGAATGTTCTTGGTATATCTTCAAGGACTTCTTTCATGACTCTTCAACGACCACATaGCTAATTTTGCTATTAGCT +
Preference number: 4 (lower is better)
Translates to: TNDTDECSWYIFKDFFHDSSTTT*LILLLA
Trigger: AGCTAATAGCAAAATTAGTCATGTGGTCGTTGAAGA...GTCATGAAAGAAGTCCTTGAAGATATACCAAGAACATTCATCAGTATCATTCGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR GCA 90 bp ACGAATGATACTGATGAATGTTCTTGGTATATCTTCAAGGACTTCTTTCATGACCTACAATTCGGTTTGTaGTCTTTTCTTTCCCAAGTA +
Preference number: 4 (lower is better)
Translates to: TNDTDECSWYIFKDFFHDLQFGL*SFLSQV
Trigger: TACTTGGGAAAGAAAAGAGCACAAACCGAATTGTAG...GTCATGAAAGAAGTCCTTGAAGATATACCAAGAACATTCATCAGTATCATTCGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR GCA 90 bp ACGAATGATACTGATGAATGTTCTTGGTATATCTTCAAGGACTTCTTTCATGACACAGCTACTTATGCTTaGATCATCTTCTACAATTCG +
Preference number: 4 (lower is better)
Translates to: TNDTDECSWYIFKDFFHDTATYA*IIFYNS
Trigger: CGAATTGTAGAAGATGATGCAAGCATAAGTAGCTGT...GTCATGAAAGAAGTCCTTGAAGATATACCAAGAACATTCATCAGTATCATTCGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR CCA 90 bp GATACTGATGAATGTTCTTGGTATATCTTCAAGGACTTCTTTCATGACTTGACTTTTCATTCAGTAGCTTaGCTGATGAAGCATCTTGTT +
Preference number: 4 (lower is better)
Translates to: DTDECSWYIFKDFFHDLTFHSVA*LMKHLV
Trigger: AACAAGATGCTTCATCAGCCAAGCTACTGAATGAAA...AGTCAAGTCATGAAAGAAGTCCTTGAAGATATACCAAGAACATTCATCAGTATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298767.10
ENST00000372075.2
CDS-3UTR GCA 90 bp GATACTGATGAATGTTCTTGGTATATCTTCAAGGACTTCTTTCATGACTTGACTAAAATCCAAGTTTTCTaGATTGTTAGTACCAGACTG +
Preference number: 4 (lower is better)
Translates to: DTDECSWYIFKDFFHDLTKIQVF*IVSTRL
Trigger: CAGTCTGGTACTAACAATGCAGAAAACTTGGATTTT...AGTCAAGTCATGAAAGAAGTCCTTGAAGATATACCAAGAACATTCATCAGTATC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR GCA 90 bp ACGAATGATACTGATGAATGTTCTTGGTATATCTTCAAGGACTTCTTTCATGACATCAGTTCTTCACAATaGTGTAATGCTTTAGCTGAT +
Preference number: 4 (lower is better)
Translates to: TNDTDECSWYIFKDFFHDISSSQ*CNALAD
Trigger: ATCAGCTAAAGCATTACAGCATTGTGAAGAACTGAT...GTCATGAAAGAAGTCCTTGAAGATATACCAAGAACATTCATCAGTATCATTCGT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298767.10
ENST00000372075.2
CDS-3UTR CCA 90 bp GATACTGATGAATGTTCTTGGTATATCTTCAAGGACTTCTTTCATGACTTGACTAATTTCTTGGATATCTaGTTTGAAATTGGGCCTCTT +
Preference number: 4 (lower is better)
Translates to: DTDECSWYIFKDFFHDLTNFLDI*FEIGPL
Trigger: AAGAGGCCCAATTTCAAACCAGATATCCAAGAAATT...AGTCAAGTCATGAAAGAAGTCCTTGAAGATATACCAAGAACATTCATCAGTATC
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS GCA 90 bp TCTCGCTGGCCGCCACTGCTGGAGCTGGTAACAGAGCCTGCTGTGTaGCCCCGCTGGGCCGCCGCCGCCTCCTGCGCCGCCGCTTCCGCC +
Preference number: 5 (lower is better)
Translates to: SRWPPLLELVTEPAV*PRWAAAASCAAASA
Trigger: GGCGGAAGCGGCGGCGCAGGAGGCGGCGGCGGCCCAGCGGGGGCACACAGCAGGCTCTGTTACCAGCTCCAGCAGTGGCGGCCAGCGAGA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS CCA 90 bp CCGCCACTGCTGGAGCTGGTAACAGAGCCTGCTGTGTGCCCCCGCTaGGCCGCCGCCGCCTCCTGCGCCGCCGCTTCCGCCGGTGAATGG +
Preference number: 5 (lower is better)
Translates to: PPLLELVTEPAVCPR*AAAASCAAASAGEW
Trigger: CCATTCACCGGCGGAAGCGGCGGCGCAGGAGGCGGCGGCGGCCCAGCGGGGGCACACAGCAGGCTCTGTTACCAGCTCCAGCAGTGGCGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS CCA 90 bp TCCCCGCCTCGAGCGCCGCCGGCCGGGCCCAGGCCTAGCTCTCGCTaGCCGCCACTGCTGGAGCTGGTAACAGAGCCTGCTGTGTGCCCC +
Preference number: 5 (lower is better)
Translates to: SPPRAPPAGPRPSSR*PPLLELVTEPAVCP
Trigger: GGGGCACACAGCAGGCTCTGTTACCAGCTCCAGCAGTGGCGGCCAGCGAGAGCTAGGCCTGGGCCCGGCCGGCGGCGCTCGAGGCGGGGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS CCA 90 bp CGCTGGGCCGCCGCCGCCTCCTGCGCCGCCGCTTCCGCCGGTGAATaGTCAGTGCTGGAGTTTGAACAGGGCCCTGAACCATCTCAACGC +
Preference number: 5 (lower is better)
Translates to: RWAAAASCAAASAGE*SVLEFEQGPEPSQR
Trigger: GCGTTGAGATGGTTCAGGGCCCTGTTCAAACTCCAGCACTGACCATTCACCGGCGGAAGCGGCGGCGCAGGAGGCGGCGGCGGCCCAGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS GCA 90 bp CCTGGCAGAGACACCCAAGAAGTAGTGCTGTGTAGGAGGCCACAATaGAATCCTCCATGTGTTTGCCGGCATGCTGAAGGGCTGAGAGAA +
Preference number: 5 (lower is better)
Translates to: PGRDTQEVVLCRRPQ*NPPCVCRHAEGLRE
Trigger: TTCTCTCAGCCCTTCAGCATGCCGGCAAACACATGGAGGATTGCATTGTGGCCTCCTACACAGCACTACTTCTTGGGTGTCTCTGCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484070.1
CDS-3UTR CAA 90 bp GCCTTTGCACCTGGCTGGCATGACAACAGTGGCTCAACATACACAGCAGTTGCAGGTCAGTGCTGGAGTTaGAACAGGGCCCTGAACCAT +
Preference number: 5 (lower is better)
Translates to: AFAPGWHDNSGSTYTAVAGQCWS*NRALNH
Trigger: ATGGTTCAGGGCCCTGTTCAAACTCCAGCACTGACC...TGCAACTGCTGTGTATGTTGAGCCACTGTTGTCATGCCAGCCAGGTGCAAAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR CAA 90 bp GCCTTTGCACCTGGCTGGCATGACAACAGTGGCTCAACATACACAGCAGTTGCATCCTGGGAATTATCATaGCTTTCTGGGGGAGGCTGC +
Preference number: 5 (lower is better)
Translates to: AFAPGWHDNSGSTYTAVASWELS*LSGGGC
Trigger: GCAGCCTCCCCCAGAAAGCAATGATAATTCCCAGGA...TGCAACTGCTGTGTATGTTGAGCCACTGTTGTCATGCCAGCCAGGTGCAAAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS TCA 90 bp GTAGGTACTTTGGAACCTGAAGCACACAGTTCAGCGCTGTGCCTATaGGACCGTCCTGCTCTCCTGTTTTGGTGCTGCCCCACTCATTAT +
Preference number: 5 (lower is better)
Translates to: VGTLEPEAHSSALCL*DRPALLFWCCPTHY
Trigger: ATAATGAGTGGGGCAGCACCAAAACAGGAGAGCAGGACGGTCTCATAGGCACAGCGCTGAACTGTGTGCTTCAGGTTCCAAAGTACCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298767.10
ENST00000372075.2
CDS-3UTR CAA 90 bp ACGAATGATACTGATGAATGTTCTTGGTATATCTTCAAGGACTTCTTTCATGACAGCCTGGCGGGTGCTTaGGCCACGGGCCGCCTCCGC +
Preference number: 5 (lower is better)
Translates to: TNDTDECSWYIFKDFFHDSLAGA*ATGRLR
Trigger: GCGGAGGCGGCCCGTGGCCAAAGCACCCGCCAGGCT...GTCATGAAAGAAGTCCTTGAAGATATACCAAGAACATTCATCAGTATCATTCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS CCA 90 bp GTGGGAGCATCTTTGATCAACTCATCTGTTTTACTTTCTGCTAGCTaGGCTGCCCGCTCTCGCTCAAGGAATAGCTGCACTAAAGCCTGG +
Preference number: 5 (lower is better)
Translates to: VGASLINSSVLLSAS*AARSRSRNSCTKAW
Trigger: CCAGGCTTTAGTGCAGCTATTCCTTGAGCGAGAGCGGGCAGCCCAGCTAGCAGAAAGTAAAACAGATGAGTTGATCAAAGATGCTCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR CAA 90 bp GCCTTTGCACCTGGCTGGCATGACAACAGTGGCTCAACATACACAGCAGTTGCACAGTACGTCCTACAGTaGGTTGGCCTAAGAACACTT +
Preference number: 5 (lower is better)
Translates to: AFAPGWHDNSGSTYTAVAQYVLQ*VGLRTL
Trigger: AAGTGTTCTTAGGCCAACCAACTGTAGGACGTACTG...TGCAACTGCTGTGTATGTTGAGCCACTGTTGTCATGCCAGCCAGGTGCAAAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR CAA 90 bp GCACCTGGCTGGCATGACAACAGTGGCTCAACATACACAGCAGTTGCACTAACACCTGAGGTAGGTACTTaGGAACCTGAAGCACACAGT +
Preference number: 5 (lower is better)
Translates to: APGWHDNSGSTYTAVALTPEVGT*EPEAHS
Trigger: ACTGTGTGCTTCAGGTTCCAAAGTACCTACCTCAGG...TGTTAGTGCAACTGCTGTGTATGTTGAGCCACTGTTGTCATGCCAGCCAGGTGC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298767.10
ENST00000372075.2
CDS-3UTR CAA 90 bp GCCTTTGCACCTGGCTGGCATGACAACAGTGGCTCAACATACACAGCAGTTGCACACGATGTTTCCATGTaGACAAGACAGTGCCGATTC +
Preference number: 5 (lower is better)
Translates to: AFAPGWHDNSGSTYTAVAHDVSM*TRQCRF
Trigger: GAATCGGCACTGTCTTGTCAACATGGAAACATCGTG...TGCAACTGCTGTGTATGTTGAGCCACTGTTGTCATGCCAGCCAGGTGCAAAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS TCA 90 bp CTTGCCACTCTCCACTCTTATCATGCTGAGTGGTGGGAGCATCTTTaGTCAACTCATCTGTTTTACTTTCTGCTAGCTGGGCTGCCCGCT +
Preference number: 5 (lower is better)
Translates to: LATLHSYHAEWWEHL*STHLFYFLLAGLPA
Trigger: AGCGGGCAGCCCAGCTAGCAGAAAGTAAAACAGATGAGTTGATCAAAGATGCTCCCACCACTCAGCATGATAAGAGTGGAGAGTGGCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298767.10
ENST00000372075.2
CDS TCA 90 bp ATGCAGTCCTCCACTGCTTTGCCTACATGGTTAGTTACATTCTGGTaGGGCAGAGGCTTACTGTCAGCTAAGCATATGCTGTCCTCAGCA +
Preference number: 5 (lower is better)
Translates to: MQSSTALPTWLVTFW*GRGLLSAKHMLSSA
Trigger: TGCTGAGGACAGCATATGCTTAGCTGACAGTAAGCCTCTGCCTCACCAGAATGTAACTAACCATGTAGGCAAAGCAGTGGAGGACTGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298767.10
ENST00000372075.2
CDS CCA 90 bp GTGGGAGCATCTTTGATCAACTCATCTGTTTTACTTTCTGCTAGCTaGGCTGCCCGCTCTCGCTCAAGGAATAGCAGCACTCGAATATCA +
Preference number: 5 (lower is better)
Translates to: VGASLINSSVLLSAS*AARSRSRNSSTRIS
Trigger: TGATATTCGAGTGCTGCTATTCCTTGAGCGAGAGCGGGCAGCCCAGCTAGCAGAAAGTAAAACAGATGAGTTGATCAAAGATGCTCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372075.2
CDS-3UTR CAA 90 bp GCACCTGGCTGGCATGACAACAGTGGCTCAACATACACAGCAGTTGCACTAACATCTTGGATATCTGGTTaGAAATTGGGCCTCTTCTGC +
Preference number: 5 (lower is better)
Translates to: APGWHDNSGSTYTAVALTSWISG*KLGLFC
Trigger: GCAGAAGAGGCCCAATTTCAAACCAGATATCCAAGA...TGTTAGTGCAACTGCTGTGTATGTTGAGCCACTGTTGTCATGCCAGCCAGGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR CAA 90 bp GCACCTGGCTGGCATGACAACAGTGGCTCAACATACACAGCAGTTGCACTAACAGAGGATTTCGTTTTATaGGCCCTACAGTACGTCCTA +
Preference number: 5 (lower is better)
Translates to: APGWHDNSGSTYTAVALTEDFVL*ALQYVL
Trigger: TAGGACGTACTGTAGGGCCAATAAAACGAAATCCTC...TGTTAGTGCAACTGCTGTGTATGTTGAGCCACTGTTGTCATGCCAGCCAGGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR CAA 90 bp GCACCTGGCTGGCATGACAACAGTGGCTCAACATACACAGCAGTTGCACTAACATTTGTGGGTGACCGTTaGGGGCCACTAAAAATCTTT +
Preference number: 5 (lower is better)
Translates to: APGWHDNSGSTYTAVALTFVGDR*GPLKIF
Trigger: AAAGATTTTTAGTGGCCCCAAACGGTCACCCACAAA...TGTTAGTGCAACTGCTGTGTATGTTGAGCCACTGTTGTCATGCCAGCCAGGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR CAA 90 bp GCACCTGGCTGGCATGACAACAGTGGCTCAACATACACAGCAGTTGCACTAACATTCTCCACTTGTTTCTaGCCACTCTCCACTCTTATC +
Preference number: 5 (lower is better)
Translates to: APGWHDNSGSTYTAVALTFSTCF*PLSTLI
Trigger: GATAAGAGTGGAGAGTGGCAAGAAACAAGTGGAGAA...TGTTAGTGCAACTGCTGTGTATGTTGAGCCACTGTTGTCATGCCAGCCAGGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298767.10
ENST00000372075.2
CDS-3UTR CAA 90 bp GCCTTTGCACCTGGCTGGCATGACAACAGTGGCTCAACATACACAGCAGTTGCACATCAGTCTTTTCAGTaGACACCCACTGTATTTCTC +
Preference number: 5 (lower is better)
Translates to: AFAPGWHDNSGSTYTAVAHQSFQ*TPTVFL
Trigger: GAGAAATACAGTGGGTGTCAACTGAAAAGACTGATG...TGCAACTGCTGTGTATGTTGAGCCACTGTTGTCATGCCAGCCAGGTGCAAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298767.10
ENST00000372075.2
CDS-3UTR CAA 90 bp GCACCTGGCTGGCATGACAACAGTGGCTCAACATACACAGCAGTTGCACTAACACCTGGGCTAAATTCTTaGAAGAAACTGGTAGAGACT +
Preference number: 5 (lower is better)
Translates to: APGWHDNSGSTYTAVALTPGLNS*KKLVET
Trigger: AGTCTCTACCAGTTTCTTCAAAGAATTTAGCCCAGG...TGTTAGTGCAACTGCTGTGTATGTTGAGCCACTGTTGTCATGCCAGCCAGGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR CAA 90 bp AGGCAGCCACTGCATTTAAAAACATTACAGCTGGCACTGATACAAGAGCCCCGACATTATATACAGCTTTaGTGGGTGACCGTTTGGGGC +
Preference number: 5 (lower is better)
Translates to: RQPLHLKTLQLALIQEPRHYIQL*WVTVWG
Trigger: GCCCCAAACGGTCACCCACAAAAGCTGTATATAATG...TCGGGGCTCTTGTATCAGTGCCAGCTGTAATGTTTTTAAATGCAGTGGCTGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR CAA 90 bp GCCTTTGCACCTGGCTGGCATGACAACAGTGGCTCAACATACACAGCAGTTGCATTTTCATTCAGTAGCTaGGCTGATGAAGCATCTTGT +
Preference number: 5 (lower is better)
Translates to: AFAPGWHDNSGSTYTAVAFSFSS*ADEASC
Trigger: ACAAGATGCTTCATCAGCCAAGCTACTGAATGAAAA...TGCAACTGCTGTGTATGTTGAGCCACTGTTGTCATGCCAGCCAGGTGCAAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298767.10
ENST00000372075.2
CDS-3UTR CAA 90 bp GCACCTGGCTGGCATGACAACAGTGGCTCAACATACACAGCAGTTGCACTAACAAGATCAAGATGCTTGTaGTGTACAGTTTCACAGAGC +
Preference number: 5 (lower is better)
Translates to: APGWHDNSGSTYTAVALTRSRCL*CTVSQS
Trigger: GCTCTGTGAAACTGTACACAACAAGCATCTTGATCT...TGTTAGTGCAACTGCTGTGTATGTTGAGCCACTGTTGTCATGCCAGCCAGGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298767.10
ENST00000372075.2
CDS-3UTR CAA 90 bp GCCTTTGCACCTGGCTGGCATGACAACAGTGGCTCAACATACACAGCAGTTGCATGCTATCAAGTAGCTTaGATTTTCGGGATTATGCAC +
Preference number: 5 (lower is better)
Translates to: AFAPGWHDNSGSTYTAVACYQVA*IFGIMH
Trigger: GTGCATAATCCCGAAAATCAAAGCTACTTGATAGCA...TGCAACTGCTGTGTATGTTGAGCCACTGTTGTCATGCCAGCCAGGTGCAAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298767.10
ENST00000372075.2
CDS-3UTR CAA 90 bp AGGCAGCCACTGCATTTAAAAACATTACAGCTGGCACTGATACAAGAGCCCCGACAGTCCTCCACTGCTTaGCCTACATGGTTAGTTACA +
Preference number: 5 (lower is better)
Translates to: RQPLHLKTLQLALIQEPRQSSTA*PTWLVT
Trigger: TGTAACTAACCATGTAGGCAAAGCAGTGGAGGACTG...TCGGGGCTCTTGTATCAGTGCCAGCTGTAATGTTTTTAAATGCAGTGGCTGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR CAA 90 bp GCACCTGGCTGGCATGACAACAGTGGCTCAACATACACAGCAGTTGCACTAACAGTGGTGGGAGCATCTTaGATCAACTCATCTGTTTTA +
Preference number: 5 (lower is better)
Translates to: APGWHDNSGSTYTAVALTVVGAS*INSSVL
Trigger: TAAAACAGATGAGTTGATCAAAGATGCTCCCACCAC...TGTTAGTGCAACTGCTGTGTATGTTGAGCCACTGTTGTCATGCCAGCCAGGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298767.10
ENST00000372075.2
CDS-3UTR CAA 90 bp GCCTTTGCACCTGGCTGGCATGACAACAGTGGCTCAACATACACAGCAGTTGCATTTTCCCCTTCAAACTaGCCCAGAATAAAGCAAGAA +
Preference number: 5 (lower is better)
Translates to: AFAPGWHDNSGSTYTAVAFSPSN*PRIKQE
Trigger: TTCTTGCTTTATTCTGGGCAAGTTTGAAGGGGAAAA...TGCAACTGCTGTGTATGTTGAGCCACTGTTGTCATGCCAGCCAGGTGCAAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298767.10
ENST00000372075.2
CDS TCA 90 bp TTCAGGCCATCTTTACTCGATTCACTGTTTGCTTTGGCTAAGGCCTaGCTGGTGCCGTCCATCAGCTTATCAAAATTTGATGCTCCTTGG +
Preference number: 5 (lower is better)
Translates to: FRPSLLDSLFALAKA*LVPSISLSKFDAPW
Trigger: CCAAGGAGCATCAAATTTTGATAAGCTGATGGACGGCACCAGTCAGGCCTTAGCCAAAGCAAACAGTGAATCGAGTAAAGATGGCCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS TCA 90 bp GTCCCTCTAAAACTGGTCCCACAACTTACACCCCCTTTCTTTGCCTaGTTCAGGCCATCTTTACTCGATTCACTGTTTGCTTTGGCTAAG +
Preference number: 5 (lower is better)
Translates to: VPLKLVPQLTPPFFA*FRPSLLDSLFALAK
Trigger: CTTAGCCAAAGCAAACAGTGAATCGAGTAAAGATGGCCTGAATCAGGCAAAGAAAGGGGGTGTAAGTTGTGGGACCAGTTTTAGAGGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS GCA 90 bp AACTGTCCCTCTAAAACTGGTCCCACAACTTACACCCCCTTTCTTTaGCTGATTCAGGCCATCTTTACTCGATTCACTGTTTGCTTTGGC +
Preference number: 5 (lower is better)
Translates to: NCPSKTGPTTYTPFL*LIQAIFTRFTVCFG
Trigger: GCCAAAGCAAACAGTGAATCGAGTAAAGATGGCCTGAATCAGGCAAAGAAAGGGGGTGTAAGTTGTGGGACCAGTTTTAGAGGGACAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS GCA 90 bp CTGGGAATCATCCAAGGTTTTAAAGACCATTGCTACCATCCCATGTaGTCTCAGGTGCATTCGAAAACTGGGCATGGCACATTTAGTAGC +
Preference number: 5 (lower is better)
Translates to: LGIIQGFKDHCYHPM*SQVHSKTGHGTFSS
Trigger: GCTACTAAATGTGCCATGCCCAGTTTTCGAATGCACCTGAGAGCACATGGGATGGTAGCAATGGTCTTTAAAACCTTGGATGATTCCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298767.10
ENST00000489996.1
CDS GCA 90 bp CAGATTCTGATGGTGCTGGGAATCATCCAAGGTTTTAAAGACCATTaGTACCATCCCATGTGCTCTCAGGTGCATTCGAAAACTGGGCAT +
Preference number: 5 (lower is better)
Translates to: QILMVLGIIQGFKDH*YHPMCSQVHSKTGH
Trigger: ATGCCCAGTTTTCGAATGCACCTGAGAGCACATGGGATGGTAGCAATGGTCTTTAAAACCTTGGATGATTCCCAGCACCATCAGAATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298767.10
ENST00000489996.1
CDS-3UTR CAA 90 bp GCACCTGGCTGGCATGACAACAGTGGCTCAACATACACAGCAGTTGCACTAACAACTGTAGTTTCTGCATaGGGTTTCTTAGTACTGTCA +
Preference number: 5 (lower is better)
Translates to: APGWHDNSGSTYTAVALTTVVSA*GFLVLS
Trigger: TGACAGTACTAAGAAACCCAATGCAGAAACTACAGT...TGTTAGTGCAACTGCTGTGTATGTTGAGCCACTGTTGTCATGCCAGCCAGGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR CAA 90 bp GCACCTGGCTGGCATGACAACAGTGGCTCAACATACACAGCAGTTGCACTAACACATCATCTTTTTGATTaGGTTCCTTTGAAGACAGCC +
Preference number: 5 (lower is better)
Translates to: APGWHDNSGSTYTAVALTHHLFD*VPLKTA
Trigger: GGCTGTCTTCAAAGGAACCAAATCAAAAAGATGATG...TGTTAGTGCAACTGCTGTGTATGTTGAGCCACTGTTGTCATGCCAGCCAGGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR CAA 90 bp ACTACCCTGGGTTTGACTATTTTGCCTCCTCCTTTTAACAGGGCACATCATCTTCCTGAGGTAGGTACTTaGGAACCTGAAGCACACAGT +
Preference number: 5 (lower is better)
Translates to: TTLGLTILPPPFNRAHHLPEVGT*EPEAHS
Trigger: ACTGTGTGCTTCAGGTTCCAAAGTACCTACCTCAGG...AAGATGATGTGCCCTGTTAAAAGGAGGAGGCAAAATAGTCAAACCCAGGGTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR CAA 90 bp GCACCTGGCTGGCATGACAACAGTGGCTCAACATACACAGCAGTTGCACTAACATTTTCCCCTTCAAACTaGCCCAGAATAAAGCAAGAA +
Preference number: 5 (lower is better)
Translates to: APGWHDNSGSTYTAVALTFSPSN*PRIKQE
Trigger: TTCTTGCTTTATTCTGGGCAAGTTTGAAGGGGAAAA...TGTTAGTGCAACTGCTGTGTATGTTGAGCCACTGTTGTCATGCCAGCCAGGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298767.10
ENST00000372075.2
CDS CCA 90 bp TCTTTGCCTGATTCAGGCCATCTTTACTCGATTCACTGTTTGCTTTaGCTAAGGCCTGACTGGTGCCGTCCATCAGCTTATCAAAATTTG +
Preference number: 5 (lower is better)
Translates to: SLPDSGHLYSIHCLL*LRPDWCRPSAYQNL
Trigger: CAAATTTTGATAAGCTGATGGACGGCACCAGTCAGGCCTTAGCCAAAGCAAACAGTGAATCGAGTAAAGATGGCCTGAATCAGGCAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR CAA 90 bp GCACCTGGCTGGCATGACAACAGTGGCTCAACATACACAGCAGTTGCACTAACAGTTCTAACAGATCCCTaGATTGGAGATATTTCTGAT +
Preference number: 5 (lower is better)
Translates to: APGWHDNSGSTYTAVALTVLTDP*IGDISD
Trigger: ATCAGAAATATCTCCAATCAAGGGATCTGTTAGAAC...TGTTAGTGCAACTGCTGTGTATGTTGAGCCACTGTTGTCATGCCAGCCAGGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR CAA 90 bp GCACCTGGCTGGCATGACAACAGTGGCTCAACATACACAGCAGTTGCACTAACATGTCTTTCTTTCTACTaGACAGTCATCATCTTCATC +
Preference number: 5 (lower is better)
Translates to: APGWHDNSGSTYTAVALTCLSFY*TVIIFI
Trigger: GATGAAGATGATGACTGTCAAGTAGAAAGAAAGACA...TGTTAGTGCAACTGCTGTGTATGTTGAGCCACTGTTGTCATGCCAGCCAGGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR CAA 90 bp ACTACCCTGGGTTTGACTATTTTGCCTCCTCCTTTTAACAGGGCACATCATCTTACAGTTTTTATCACTTaGGATGGTGGTGCAGGAGCC +
Preference number: 5 (lower is better)
Translates to: TTLGLTILPPPFNRAHHLTVFIT*DGGAGA
Trigger: GGCTCCTGCACCACCATCCAAAGTGATAAAAACTGT...AAGATGATGTGCCCTGTTAAAAGGAGGAGGCAAAATAGTCAAACCCAGGGTAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS TCA 90 bp CTCTATCAAGATCCATGTTCAAACGATCTCTACTCAGTATATACATaGGGGCAGCTGTACAGAGGGACAGATTCTGATGGTGCTGGGAAT +
Preference number: 5 (lower is better)
Translates to: LYQDPCSNDLYSVYT*GQLYRGTDSDGAGN
Trigger: ATTCCCAGCACCATCAGAATCTGTCCCTCTGTACAGCTGCCCTCATGTATATACTGAGTAGAGATCGTTTGAACATGGATCTTGATAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298767.10
ENST00000489996.1
CDS GCA 90 bp TCCAAGGTTTTAAAGACCATTGCTACCATCCCATGTGCTCTCAGGTaGATTCGAAAACTGGGCATGGCACATTTAGTAGCCAAGCTAATA +
Preference number: 5 (lower is better)
Translates to: SKVLKTIATIPCALR*IRKLGMAHLVAKLI
Trigger: TATTAGCTTGGCTACTAAATGTGCCATGCCCAGTTTTCGAATGCACCTGAGAGCACATGGGATGGTAGCAATGGTCTTTAAAACCTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298767.10
ENST00000489996.1
CDS-3UTR CAA 90 bp TTAAGAGCCTCCCTAGCATTAAGTGTAAACTACCCTGGGTTTGACTATTTTGCCTACTCGATTCACTGTTaGCTTTGGCTAAGGCCTGAC +
Preference number: 5 (lower is better)
Translates to: LRASLALSVNYPGFDYFAYSIHC*LWLRPD
Trigger: GTCAGGCCTTAGCCAAAGCAAACAGTGAATCGAGTA...GGCAAAATAGTCAAACCCAGGGTAGTTTACACTTAATGCTAGGGAGGCTCTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR CAA 90 bp AGGCAGCCACTGCATTTAAAAACATTACAGCTGGCACTGATACAAGAGCCCCGATACAAGAGCCCCGATTaGTCACTTTATACAAGGAAA +
Preference number: 5 (lower is better)
Translates to: RQPLHLKTLQLALIQEPRYKSPD*SLYTRK
Trigger: TTTCCTTGTATAAAGTGACAAATCGGGGCTCTTGTA...TCGGGGCTCTTGTATCAGTGCCAGCTGTAATGTTTTTAAATGCAGTGGCTGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS GCA 90 bp ATGGAAGAATCAAAAGAGCACGATGTTTCCATGTTGACAAGACAGTaGCGATTCCGAGCACTATACTCCACTAGATTTATCAGCAGACCT +
Preference number: 5 (lower is better)
Translates to: MEESKEHDVSMLTRQ*RFRALYSTRFISRP
Trigger: AGGTCTGCTGATAAATCTAGTGGAGTATAGTGCTCGGAATCGGCACTGTCTTGTCAACATGGAAACATCGTGCTCTTTTGATTCTTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR CAA 90 bp ACTACCCTGGGTTTGACTATTTTGCCTCCTCCTTTTAACAGGGCACATCATCTTGCATCTCTGTCATTATaGAAAAGTCTCCTTCTGGCA +
Preference number: 5 (lower is better)
Translates to: TTLGLTILPPPFNRAHHLASLSL*KSLLLA
Trigger: TGCCAGAAGGAGACTTTTCAATAATGACAGAGATGC...AAGATGATGTGCCCTGTTAAAAGGAGGAGGCAAAATAGTCAAACCCAGGGTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR CAA 90 bp GATACTGATGAATGTTCTTGGTATATCTTCAAGGACTTCTTTCATGACTTGACTGTAGCTAAGCTGCCTTaGCACCTGGCTGGCATGACA +
Preference number: 5 (lower is better)
Translates to: DTDECSWYIFKDFFHDLTVAKLP*HLAGMT
Trigger: TGTCATGCCAGCCAGGTGCAAAGGCAGCTTAGCTAC...AGTCAAGTCATGAAAGAAGTCCTTGAAGATATACCAAGAACATTCATCAGTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298767.10
ENST00000372075.2
CDS-3UTR CAA 90 bp ACGAATGATACTGATGAATGTTCTTGGTATATCTTCAAGGACTTCTTTCATGACGTAGCTAAGCTGCCTTaGCACCTGGCTGGCATGACA +
Preference number: 5 (lower is better)
Translates to: TNDTDECSWYIFKDFFHDVAKLP*HLAGMT
Trigger: TGTCATGCCAGCCAGGTGCAAAGGCAGCTTAGCTAC...GTCATGAAAGAAGTCCTTGAAGATATACCAAGAACATTCATCAGTATCATTCGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298767.10
ENST00000372075.2
CDS-3UTR CAA 90 bp TTAAGAGCCTCCCTAGCATTAAGTGTAAACTACCCTGGGTTTGACTATTTTGCCCTGGGTTTGACTATTTaGCCTCCTCCTTTTAACAGG +
Preference number: 5 (lower is better)
Translates to: LRASLALSVNYPGFDYFALGLTI*PPPFNR
Trigger: CCTGTTAAAAGGAGGAGGCAAAATAGTCAAACCCAG...GGCAAAATAGTCAAACCCAGGGTAGTTTACACTTAATGCTAGGGAGGCTCTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR CAA 90 bp ACTACCCTGGGTTTGACTATTTTGCCTCCTCCTTTTAACAGGGCACATCATCTTCTTCTACAATTCGGTTaGTGCTCTTTTCTTTCCCAA +
Preference number: 5 (lower is better)
Translates to: TTLGLTILPPPFNRAHHLLLQFG*CSFLSQ
Trigger: TTGGGAAAGAAAAGAGCACAAACCGAATTGTAGAAG...AAGATGATGTGCCCTGTTAAAAGGAGGAGGCAAAATAGTCAAACCCAGGGTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR CAA 90 bp ACTACCCTGGGTTTGACTATTTTGCCTCCTCCTTTTAACAGGGCACATCATCTTTCTAGATCAAGATGCTaGTTGTGTACAGTTTCACAG +
Preference number: 5 (lower is better)
Translates to: TTLGLTILPPPFNRAHHLSRSRC*LCTVSQ
Trigger: CTGTGAAACTGTACACAACAAGCATCTTGATCTAGA...AAGATGATGTGCCCTGTTAAAAGGAGGAGGCAAAATAGTCAAACCCAGGGTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR CAA 90 bp TTAAGAGCCTCCCTAGCATTAAGTGTAAACTACCCTGGGTTTGACTATTTTGCCCATCAGTCTTTTCAGTaGACACCCACTGTATTTCTC +
Preference number: 5 (lower is better)
Translates to: LRASLALSVNYPGFDYFAHQSFQ*TPTVFL
Trigger: GAGAAATACAGTGGGTGTCAACTGAAAAGACTGATG...GGCAAAATAGTCAAACCCAGGGTAGTTTACACTTAATGCTAGGGAGGCTCTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS TCA 90 bp TTAGTAGCCAAGCTAATAACACTAAGGCAACGTGTGTTTAGAGGCTaGGTGCTCTTTAAGCCACTTAACAAGTACTCAATGTCATCAGTG +
Preference number: 5 (lower is better)
Translates to: LVAKLITLRQRVFRG*VLFKPLNKYSMSSV
Trigger: CACTGATGACATTGAGTACTTGTTAAGTGGCTTAAAGAGCACTCAGCCTCTAAACACACGTTGCCTTAGTGTTATTAGCTTGGCTACTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298767.10
ENST00000489996.1
CDS TCA 90 bp TGTATTTCTCCACTTGTTTCTTGCCACTCTCCACTCTTATCATGCTaGGTGGTGGGAGCATCTTTGATCAACTCATCTGTTTTACTTTCT +
Preference number: 5 (lower is better)
Translates to: CISPLVSCHSPLLSC*VVGASLINSSVLLS
Trigger: AGAAAGTAAAACAGATGAGTTGATCAAAGATGCTCCCACCACTCAGCATGATAAGAGTGGAGAGTGGCAAGAAACAAGTGGAGAAATACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298767.10
ENST00000372075.2
CDS GCA 90 bp TTCTTCGGAATTTCTTGGATATCTGGTTTGAAATTGGGCCTCTTCTaGCCTAATTTAGCCATAAATGTGGTCTCTCCCCATTTTGTGCTA +
Preference number: 5 (lower is better)
Translates to: FFGISWISGLKLGLF*PNLAINVVSPHFVL
Trigger: TAGCACAAAATGGGGAGAGACCACATTTATGGCTAAATTAGGGCAGAAGAGGCCCAATTTCAAACCAGATATCCAAGAAATTCCGAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS CCA 90 bp TCTCCAGTACTTTCTTCTTCCACTTTAGGTTTCTTCGGAATTTCTTaGATATCTGGTTTGAAATTGGGCCTCTTCTGCCCTAATTTAGCC +
Preference number: 5 (lower is better)
Translates to: SPVLSSSTLGFFGIS*ISGLKLGLFCPNLA
Trigger: GGCTAAATTAGGGCAGAAGAGGCCCAATTTCAAACCAGATATCCAAGAAATTCCGAAGAAACCTAAAGTGGAAGAAGAAAGTACTGGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR CAA 90 bp TTAAGAGCCTCCCTAGCATTAAGTGTAAACTACCCTGGGTTTGACTATTTTGCCAGACTTCATCGAATTTaGAACTGCCATTTCCACCTT +
Preference number: 5 (lower is better)
Translates to: LRASLALSVNYPGFDYFARLHRI*NCHFHL
Trigger: AAGGTGGAAATGGCAGTTCAAAATTCGATGAAGTCT...GGCAAAATAGTCAAACCCAGGGTAGTTTACACTTAATGCTAGGGAGGCTCTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR CAA 90 bp TTAAGAGCCTCCCTAGCATTAAGTGTAAACTACCCTGGGTTTGACTATTTTGCCTGCTATCAAGTAGCTTaGATTTTCGGGATTATGCAC +
Preference number: 5 (lower is better)
Translates to: LRASLALSVNYPGFDYFACYQVA*IFGIMH
Trigger: GTGCATAATCCCGAAAATCAAAGCTACTTGATAGCA...GGCAAAATAGTCAAACCCAGGGTAGTTTACACTTAATGCTAGGGAGGCTCTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR CAA 90 bp ACTACCCTGGGTTTGACTATTTTGCCTCCTCCTTTTAACAGGGCACATCATCTTGACTTCTTTCATGACTaGACTTTTCTTTGTCTAAGG +
Preference number: 5 (lower is better)
Translates to: TTLGLTILPPPFNRAHHLDFFHD*TFLCLR
Trigger: CCTTAGACAAAGAAAAGTCAAGTCATGAAAGAAGTC...AAGATGATGTGCCCTGTTAAAAGGAGGAGGCAAAATAGTCAAACCCAGGGTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR CAA 90 bp TTAAGAGCCTCCCTAGCATTAAGTGTAAACTACCCTGGGTTTGACTATTTTGCCTTTGCGCTTATGCAATaGATCCTGTCACTCTATAGA +
Preference number: 5 (lower is better)
Translates to: LRASLALSVNYPGFDYFAFALMQ*ILSLYR
Trigger: TCTATAGAGTGACAGGATCAATTGCATAAGCGCAAA...GGCAAAATAGTCAAACCCAGGGTAGTTTACACTTAATGCTAGGGAGGCTCTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS TCA 90 bp AAAGGGAAGCATTTATCAGAAACGACAGTGTCTTCAACGACCACATaGCTAATTTTGCTATTAGCTTCAAGTACTGAAGTGACCTCTTCC +
Preference number: 5 (lower is better)
Translates to: KGKHLSETTVSSTTT*LILLLASSTEVTSS
Trigger: GGAAGAGGTCACTTCAGTACTTGAAGCTAATAGCAAAATTAGTCATGTGGTCGTTGAAGACACTGTCGTTTCTGATAAATGCTTCCCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS TCA 90 bp TTGACTTTTCTTTGTCTAAGGATAGCTCCAGCATTACCGAGCACCTaGAGCAAAGGTAAAGCAGCTAGCAATGTTCCAAATATTCAATCA +
Preference number: 5 (lower is better)
Translates to: LTFLCLRIAPALPST*SKGKAASNVPNIQS
Trigger: TGATTGAATATTTGGAACATTGCTAGCTGCTTTACCTTTGCTTCAGGTGCTCGGTAATGCTGGAGCTATCCTTAGACAAAGAAAAGTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298767.10
ENST00000372075.2
ENST00000484070.1
CDS-3UTR CAA 90 bp TTAAGAGCCTCCCTAGCATTAAGTGTAAACTACCCTGGGTTTGACTATTTTGCCTACAGCTACTTATGCTaGCATCATCTTCTACAATTC +
Preference number: 5 (lower is better)
Translates to: LRASLALSVNYPGFDYFAYSYLC*HHLLQF
Trigger: GAATTGTAGAAGATGATGCAAGCATAAGTAGCTGTA...GGCAAAATAGTCAAACCCAGGGTAGTTTACACTTAATGCTAGGGAGGCTCTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR CAA 90 bp TTAAGAGCCTCCCTAGCATTAAGTGTAAACTACCCTGGGTTTGACTATTTTGCCTGGCCTAAGAACACTTaGTACAATATCTTCCTCAAT +
Preference number: 5 (lower is better)
Translates to: LRASLALSVNYPGFDYFAWPKNT*YNIFLN
Trigger: ATTGAGGAAGATATTGTACAAAGTGTTCTTAGGCCA...GGCAAAATAGTCAAACCCAGGGTAGTTTACACTTAATGCTAGGGAGGCTCTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR CAA 90 bp GATACTGATGAATGTTCTTGGTATATCTTCAAGGACTTCTTTCATGACTTGACTTTACACCCCCTTTCTTaGCCTGATTCAGGCCATCTT +
Preference number: 5 (lower is better)
Translates to: DTDECSWYIFKDFFHDLTLHPLS*PDSGHL
Trigger: AAGATGGCCTGAATCAGGCAAAGAAAGGGGGTGTAA...AGTCAAGTCATGAAAGAAGTCCTTGAAGATATACCAAGAACATTCATCAGTATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR CAA 90 bp ACGAATGATACTGATGAATGTTCTTGGTATATCTTCAAGGACTTCTTTCATGACCAGTCCTCCACTGCTTaGCCTACATGGTTAGTTACA +
Preference number: 5 (lower is better)
Translates to: TNDTDECSWYIFKDFFHDQSSTA*PTWLVT
Trigger: TGTAACTAACCATGTAGGCAAAGCAGTGGAGGACTG...GTCATGAAAGAAGTCCTTGAAGATATACCAAGAACATTCATCAGTATCATTCGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298767.10
ENST00000372075.2
CDS GCA 90 bp TATTACAGCTACTTATGCTTGCATCATCTTCTACAATTCGGTTTGTaGTCTTTTCTTTCCCAAGTAAAGTGTCCTCCAAAGGGAAGCATT +
Preference number: 5 (lower is better)
Translates to: YYSYLCLHHLLQFGL*SFLSQVKCPPKGSI
Trigger: AATGCTTCCCTTTGGAGGACACTTTACTTGGGAAAGAAAAGAGCACAAACCGAATTGTAGAAGATGATGCAAGCATAAGTAGCTGTAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR CAA 90 bp GATACTGATGAATGTTCTTGGTATATCTTCAAGGACTTCTTTCATGACTTGACTCTAAGGGTAGTCCGTTaGTTGGAAAAGACTTCATCG +
Preference number: 5 (lower is better)
Translates to: DTDECSWYIFKDFFHDLTLRVVR*LEKTSS
Trigger: CGATGAAGTCTTTTCCAACAAACGGACTACCCTTAG...AGTCAAGTCATGAAAGAAGTCCTTGAAGATATACCAAGAACATTCATCAGTATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR CAA 90 bp ACGAATGATACTGATGAATGTTCTTGGTATATCTTCAAGGACTTCTTTCATGACTTCTCCACTTGTTTCTaGCCACTCTCCACTCTTATC +
Preference number: 5 (lower is better)
Translates to: TNDTDECSWYIFKDFFHDFSTCF*PLSTLI
Trigger: GATAAGAGTGGAGAGTGGCAAGAAACAAGTGGAGAA...GTCATGAAAGAAGTCCTTGAAGATATACCAAGAACATTCATCAGTATCATTCGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298767.10
ENST00000372075.2
CDS-3UTR CAA 90 bp GATACTGATGAATGTTCTTGGTATATCTTCAAGGACTTCTTTCATGACTTGACTAGGGTAGTCCGTTTGTaGGAAAAGACTTCATCGAAT +
Preference number: 5 (lower is better)
Translates to: DTDECSWYIFKDFFHDLTRVVRL*EKTSSN
Trigger: ATTCGATGAAGTCTTTTCCAACAAACGGACTACCCT...AGTCAAGTCATGAAAGAAGTCCTTGAAGATATACCAAGAACATTCATCAGTATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR CAA 90 bp ACGAATGATACTGATGAATGTTCTTGGTATATCTTCAAGGACTTCTTTCATGACATATCTGGTTTGAAATaGGGCCTCTTCTGCCCTAAT +
Preference number: 5 (lower is better)
Translates to: TNDTDECSWYIFKDFFHDISGLK*GLFCPN
Trigger: ATTAGGGCAGAAGAGGCCCAATTTCAAACCAGATAT...GTCATGAAAGAAGTCCTTGAAGATATACCAAGAACATTCATCAGTATCATTCGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR CAA 90 bp GATACTGATGAATGTTCTTGGTATATCTTCAAGGACTTCTTTCATGACTTGACTTGCAGTAACTATATCTaGGTAGGGCTGAGTAGGTAT +
Preference number: 5 (lower is better)
Translates to: DTDECSWYIFKDFFHDLTCSNYI*VGLSRY
Trigger: ATACCTACTCAGCCCTACCAAGATATAGTTACTGCA...AGTCAAGTCATGAAAGAAGTCCTTGAAGATATACCAAGAACATTCATCAGTATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS-3UTR CAA 90 bp ACGAATGATACTGATGAATGTTCTTGGTATATCTTCAAGGACTTCTTTCATGACGTGGTGGGAGCATCTTaGATCAACTCATCTGTTTTA +
Preference number: 5 (lower is better)
Translates to: TNDTDECSWYIFKDFFHDVVGAS*INSSVL
Trigger: TAAAACAGATGAGTTGATCAAAGATGCTCCCACCAC...GTCATGAAAGAAGTCCTTGAAGATATACCAAGAACATTCATCAGTATCATTCGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298767.10
ENST00000372075.2
CDS-3UTR CAA 90 bp GATACTGATGAATGTTCTTGGTATATCTTCAAGGACTTCTTTCATGACTTGACTGCATCTCTGTCATTATaGAAAAGTCTCCTTCTGGCA +
Preference number: 5 (lower is better)
Translates to: DTDECSWYIFKDFFHDLTASLSL*KSLLLA
Trigger: TGCCAGAAGGAGACTTTTCAATAATGACAGAGATGC...AGTCAAGTCATGAAAGAAGTCCTTGAAGATATACCAAGAACATTCATCAGTATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298767.10
ENST00000372075.2
CDS-3UTR CAA 90 bp ACGAATGATACTGATGAATGTTCTTGGTATATCTTCAAGGACTTCTTTCATGACTCTAGATCAAGATGCTaGTTGTGTACAGTTTCACAG +
Preference number: 5 (lower is better)
Translates to: TNDTDECSWYIFKDFFHDSRSRC*LCTVSQ
Trigger: CTGTGAAACTGTACACAACAAGCATCTTGATCTAGA...GTCATGAAAGAAGTCCTTGAAGATATACCAAGAACATTCATCAGTATCATTCGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298767.10
ENST00000372075.2
CDS-3UTR CAA 90 bp ACGAATGATACTGATGAATGTTCTTGGTATATCTTCAAGGACTTCTTTCATGACAAAGGAACTAAGCTGTaGTCTAGAATGTCCTCAGAA +
Preference number: 5 (lower is better)
Translates to: TNDTDECSWYIFKDFFHDKGTKL*SRMSSE
Trigger: TTCTGAGGACATTCTAGACAACAGCTTAGTTCCTTT...GTCATGAAAGAAGTCCTTGAAGATATACCAAGAACATTCATCAGTATCATTCGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298767.10
ENST00000372075.2
CDS-3UTR CAA 90 bp GATACTGATGAATGTTCTTGGTATATCTTCAAGGACTTCTTTCATGACTTGACTGACTTCTTTCATGACTaGACTTTTCTTTGTCTAAGG +
Preference number: 5 (lower is better)
Translates to: DTDECSWYIFKDFFHDLTDFFHD*TFLCLR
Trigger: CCTTAGACAAAGAAAAGTCAAGTCATGAAAGAAGTC...AGTCAAGTCATGAAAGAAGTCCTTGAAGATATACCAAGAACATTCATCAGTATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298767.10
ENST00000372075.2
CDS-3UTR CAA 90 bp ACGAATGATACTGATGAATGTTCTTGGTATATCTTCAAGGACTTCTTTCATGACAAGGAAGAAAACAATTaGCCTGGAATCAGTTACTTC +
Preference number: 5 (lower is better)
Translates to: TNDTDECSWYIFKDFFHDKEENN*PGISYF
Trigger: GAAGTAACTGATTCCAGGCAAATTGTTTTCTTCCTT...GTCATGAAAGAAGTCCTTGAAGATATACCAAGAACATTCATCAGTATCATTCGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS CCA 72 bp CGAGCGCCGCCGGCCGGGCCCAGGCCTAGCTCTCGCTaGCCGCCACTGCTGGAGCTGGTAACAGAGCCTGCT +
Preference number: 6 (lower is better)
Translates to: RAPPAGPRPSSR*PPLLELVTEPA
Trigger: AGCAGGCTCTGTTACCAGCTCCAGCAGTGGCGGCCAGCGAGAGCTAGGCCTGGGCCCGGCCGGCGGCGCTCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS TCA 72 bp CGCGGAACCCTCGCGCGGGAGAGCAGGGCCGGCAGGTaGGAGCCGAGAGAGGCGAGGGACTCTGCTTTCGGT +
Preference number: 6 (lower is better)
Translates to: RGTLARESRAGR*EPREARDSAFG
Trigger: ACCGAAAGCAGAGTCCCTCGCCTCTCTCGGCTCTCACCTGCCGGCCCTGCTCTCCCGCGCGAGGGTTCCGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS GCA 72 bp GACACCAGTTTCATATTCTCCTCGGAGCCTGGCGGGTaGTTTGGCCACGGGCCGCCTCCGCCTCTCCCGCTC +
Preference number: 6 (lower is better)
Translates to: DTSFIFSSEPGG*FGHGPPPPLPL
Trigger: GAGCGGGAGAGGCGGAGGCGGCCCGTGGCCAAAGCACCCGCCAGGCTCCGAGGAGAATATGAAACTGGTGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS CCA 72 bp CAGTTTCATATTCTCCTCGGAGCCTGGCGGGTGCTTTaGCCACGGGCCGCCTCCGCCTCTCCCGCTCCCTAC +
Preference number: 6 (lower is better)
Translates to: QFHILLGAWRVL*PRAASASPAPY
Trigger: GTAGGGAGCGGGAGAGGCGGAGGCGGCCCGTGGCCAAAGCACCCGCCAGGCTCCGAGGAGAATATGAAACTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS CAA 90 bp CCTCCTGCGCCGCCGCTTCCGCCGGTGAATGGTCAGTGCTGGAGTTaGAACAGGGCCCTGAACCATCTCAACGCCATTTGCGCTCCCGGC +
Preference number: 6 (lower is better)
Translates to: PPAPPLPPVNGQCWS*NRALNHLNAICAPG
Trigger: GCCGGGAGCGCAAATGGCGTTGAGATGGTTCAGGGCCCTGTTCAAACTCCAGCACTGACCATTCACCGGCGGAAGCGGCGGCGCAGGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS CAA 90 bp TCAGTGCTGGAGTTTGAACAGGGCCCTGAACCATCTCAACGCCATTaGCGCTCCCGGCCCCCACCTCCTTCCTCCAACAGCCGCTCGCTC +
Preference number: 6 (lower is better)
Translates to: SVLEFEQGPEPSQRH*RSRPPPPSSNSRSL
Trigger: GAGCGAGCGGCTGTTGGAGGAAGGAGGTGGGGGCCGGGAGCGCAAATGGCGTTGAGATGGTTCAGGGCCCTGTTCAAACTCCAGCACTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS GCA 72 bp CCTCCTGCGCCGCCGCTTCCGCCGGTGAATGGTCAGTaGTGGAGTTTGAACAGGGCCCTGAACCATCTCAAC +
Preference number: 6 (lower is better)
Translates to: PPAPPLPPVNGQ*WSLNRALNHLN
Trigger: GTTGAGATGGTTCAGGGCCCTGTTCAAACTCCAGCACTGACCATTCACCGGCGGAAGCGGCGGCGCAGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS TCA 72 bp TTGGAACCTGAAGCACACAGTTCAGCGCTGTGCCTATaGGACCGTCCTGCTCTCCTGTTTTGGTGCTGCCCC +
Preference number: 6 (lower is better)
Translates to: LEPEAHSSALCL*DRPALLFWCCP
Trigger: GGGGCAGCACCAAAACAGGAGAGCAGGACGGTCTCATAGGCACAGCGCTGAACTGTGTGCTTCAGGTTCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298767.10
ENST00000372075.2
CDS GCA 72 bp AGCACACAGTTCAGCGCTGTGCCTATGAGACCGTCCTaGTCTCCTGTTTTGGTGCTGCCCCACTCATTATCA +
Preference number: 6 (lower is better)
Translates to: STQFSAVPMRPS*SPVLVLPHSLS
Trigger: TGATAATGAGTGGGGCAGCACCAAAACAGGAGAGCAGGACGGTCTCATAGGCACAGCGCTGAACTGTGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298767.10
ENST00000372075.2
CDS GCA 72 bp GACACCCAAGAAGTAGTGCTGTGTAGGAGGCCACAATaGAATCCTCCATGTGTTTGCCGGCATGCTGAAGGG +
Preference number: 6 (lower is better)
Translates to: DTQEVVLCRRPQ*NPPCVCRHAEG
Trigger: CCCTTCAGCATGCCGGCAAACACATGGAGGATTGCATTGTGGCCTCCTACACAGCACTACTTCTTGGGTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298767.10
ENST00000372075.2
ENST00000484070.1
CDS GCA 72 bp CAACACCCCGATGATGGCCCTCATGCAGTCCTCCACTaGTTTGCCTACATGGTTAGTTACATTCTGGTGAGG +
Preference number: 6 (lower is better)
Translates to: QHPDDGPHAVLH*FAYMVSYILVR
Trigger: CCTCACCAGAATGTAACTAACCATGTAGGCAAAGCAGTGGAGGACTGCATGAGGGCCATCATCGGGGTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298767.10
ENST00000372075.2
CDS GCA 72 bp GAGACGACCAGCTTCTCCCAAATCTGCAGGAGTGGATaGAGTGAACTCATCCATGCTGCGTTCCATAGTATC +
Preference number: 6 (lower is better)
Translates to: ETTSFSQICRSG*SELIHAAFHSI
Trigger: GATACTATGGAACGCAGCATGGATGAGTTCACTGCATCCACTCCTGCAGATTTGGGAGAAGCTGGTCGTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS GCA 72 bp TCTGGTGAGGCAGAGGCTTACTGTCAGCTAAGCATATaGTGTCCTCAGCACGGTTGTACTGCTGAATCAGTT +
Preference number: 6 (lower is better)
Translates to: SGEAEAYCQLSI*CPQHGCTAESV
Trigger: AACTGATTCAGCAGTACAACCGTGCTGAGGACAGCATATGCTTAGCTGACAGTAAGCCTCTGCCTCACCAGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298767.10
ENST00000372075.2
CDS CAA 72 bp TTGCCTGATTCAGGCCATCTTTACTCGATTCACTGTTaGCTTTGGCTAAGGCCTGACTGGTGCCGTCCATCA +
Preference number: 6 (lower is better)
Translates to: LPDSGHLYSIHC*LWLRPDWCRPS
Trigger: TGATGGACGGCACCAGTCAGGCCTTAGCCAAAGCAAACAGTGAATCGAGTAAAGATGGCCTGAATCAGGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS CAA 90 bp CCCCTTTCTTTGCCTGATTCAGGCCATCTTTACTCGATTCACTGTTaGCTTTGGCTAAGGCCTGACTGGTGCCGTCCATCAGCTTATCAA +
Preference number: 6 (lower is better)
Translates to: PLSLPDSGHLYSIHC*LWLRPDWCRPSAYQ
Trigger: TTGATAAGCTGATGGACGGCACCAGTCAGGCCTTAGCCAAAGCAAACAGTGAATCGAGTAAAGATGGCCTGAATCAGGCAAAGAAAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS TCA 72 bp GGCCTGACTGGTGCCGTCCATCAGCTTATCAAAATTTaGTGCTCCTTGGGAGGATTTCGTTTTATTGGCCCT +
Preference number: 6 (lower is better)
Translates to: GLTGAVHQLIKI*CSLGGFRFIGP
Trigger: AGGGCCAATAAAACGAAATCCTCCCAAGGAGCATCAAATTTTGATAAGCTGATGGACGGCACCAGTCAGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS CCA 72 bp GATTCAGGCCATCTTTACTCGATTCACTGTTTGCTTTaGCTAAGGCCTGACTGGTGCCGTCCATCAGCTTAT +
Preference number: 6 (lower is better)
Translates to: DSGHLYSIHCLL*LRPDWCRPSAY
Trigger: ATAAGCTGATGGACGGCACCAGTCAGGCCTTAGCCAAAGCAAACAGTGAATCGAGTAAAGATGGCCTGAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS CCA 72 bp TCTTTGATCAACTCATCTGTTTTACTTTCTGCTAGCTaGGCTGCCCGCTCTCGCTCAAGGAATAGCTGCACT +
Preference number: 6 (lower is better)
Translates to: SLINSSVLLSAS*AARSRSRNSCT
Trigger: AGTGCAGCTATTCCTTGAGCGAGAGCGGGCAGCCCAGCTAGCAGAAAGTAAAACAGATGAGTTGATCAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS CCA 72 bp TCTTTGATCAACTCATCTGTTTTACTTTCTGCTAGCTaGGCTGCCCGCTCTCGCTCAAGGAATAGCAGCACT +
Preference number: 6 (lower is better)
Translates to: SLINSSVLLSAS*AARSRSRNSST
Trigger: AGTGCTGCTATTCCTTGAGCGAGAGCGGGCAGCCCAGCTAGCAGAAAGTAAAACAGATGAGTTGATCAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372075.2
CDS CAA 72 bp CTCGAATATCAAATCTCTGCTCCTGAGGTAGGTACTTaGGAACCTGAAGCACACAGTTCAGCGCTGTGCCTA +
Preference number: 6 (lower is better)
Translates to: LEYQISAPEVGT*EPEAHSSALCL
Trigger: TAGGCACAGCGCTGAACTGTGTGCTTCAGGTTCCAAAGTACCTACCTCAGGAGCAGAGATTTGATATTCGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298767.10
ENST00000372075.2
CDS TCA 72 bp TCCACTGCTTTGCCTACATGGTTAGTTACATTCTGGTaGGGCAGAGGCTTACTGTCAGCTAAGCATATGCTG +
Preference number: 6 (lower is better)
Translates to: STALPTWLVTFW*GRGLLSAKHML
Trigger: CAGCATATGCTTAGCTGACAGTAAGCCTCTGCCTCACCAGAATGTAACTAACCATGTAGGCAAAGCAGTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298767.10
ENST00000372075.2
CDS GCA 72 bp TTAAAGACCATTGCTACCATCCCATGTGCTCTCAGGTaGATTCGAAAACTGGGCATGGCACATTTAGTAGCC +
Preference number: 6 (lower is better)
Translates to: LKTIATIPCALR*IRKLGMAHLVA
Trigger: GGCTACTAAATGTGCCATGCCCAGTTTTCGAATGCACCTGAGAGCACATGGGATGGTAGCAATGGTCTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298767.10
ENST00000489996.1
CDS GCA 72 bp ATCCAAGGTTTTAAAGACCATTGCTACCATCCCATGTaGTCTCAGGTGCATTCGAAAACTGGGCATGGCACA +
Preference number: 6 (lower is better)
Translates to: IQGFKDHCYHPM*SQVHSKTGHGT
Trigger: TGTGCCATGCCCAGTTTTCGAATGCACCTGAGAGCACATGGGATGGTAGCAATGGTCTTTAAAACCTTGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298767.10
ENST00000489996.1
CDS CAA 72 bp AGCGCTGTGCCTATGAGACCGTCCTGCTCTCCTGTTTaGGTGCTGCCCCACTCATTATCATTAGTTAAATTA +
Preference number: 6 (lower is better)
Translates to: SAVPMRPSCSPV*VLPHSLSLVKL
Trigger: TAATTTAACTAATGATAATGAGTGGGGCAGCACCAAAACAGGAGAGCAGGACGGTCTCATAGGCACAGCGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298767.10
ENST00000372075.2
CDS CAA 90 bp TTTCCACCTTTCCTACTGTATGTTTTCCCAAATCTGGATGTCATTTaGACACCAGTTTCATATTCTCCTCGGAGCCTGGCGGGTGCTTTG +
Preference number: 6 (lower is better)
Translates to: FPPFLLYVFPNLDVI*TPVSYSPRSLAGAL
Trigger: CAAAGCACCCGCCAGGCTCCGAGGAGAATATGAAACTGGTGTCAAAATGACATCCAGATTTGGGAAAACATACAGTAGGAAAGGTGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS TCA 72 bp TCCTACTGTATGTTTTCCCAAATCTGGATGTCATTTTaGCACCAGTTTCATATTCTCCTCGGAGCCTGGCGG +
Preference number: 6 (lower is better)
Translates to: SYCMFSQIWMSF*HQFHILLGAWR
Trigger: CCGCCAGGCTCCGAGGAGAATATGAAACTGGTGTCAAAATGACATCCAGATTTGGGAAAACATACAGTAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS TCA 72 bp AAACTGGTCCCACAACTTACACCCCCTTTCTTTGCCTaGTTCAGGCCATCTTTACTCGATTCACTGTTTGCT +
Preference number: 6 (lower is better)
Translates to: KLVPQLTPPFFA*FRPSLLDSLFA
Trigger: AGCAAACAGTGAATCGAGTAAAGATGGCCTGAATCAGGCAAAGAAAGGGGGTGTAAGTTGTGGGACCAGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS TCA 72 bp CTCCACTCTTATCATGCTGAGTGGTGGGAGCATCTTTaGTCAACTCATCTGTTTTACTTTCTGCTAGCTGGG +
Preference number: 6 (lower is better)
Translates to: LHSYHAEWWEHL*STHLFYFLLAG
Trigger: CCCAGCTAGCAGAAAGTAAAACAGATGAGTTGATCAAAGATGCTCCCACCACTCAGCATGATAAGAGTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298767.10
ENST00000372075.2
CDS TCA 72 bp GCCACAATGCAATCCTCCATGTGTTTGCCGGCATGCTaGAGGGCTGAGAGAATTGAAGTAAAGAATTGTAAC +
Preference number: 6 (lower is better)
Translates to: ATMQSSMCLPAC*RAERIEVKNCN
Trigger: GTTACAATTCTTTACTTCAATTCTCTCAGCCCTTCAGCATGCCGGCAAACACATGGAGGATTGCATTGTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484070.1
CDS GCA 72 bp ATGGTGCTGGGAATCATCCAAGGTTTTAAAGACCATTaGTACCATCCCATGTGCTCTCAGGTGCATTCGAAA +
Preference number: 6 (lower is better)
Translates to: MVLGIIQGFKDH*YHPMCSQVHSK
Trigger: TTTCGAATGCACCTGAGAGCACATGGGATGGTAGCAATGGTCTTTAAAACCTTGGATGATTCCCAGCACCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298767.10
ENST00000489996.1
CDS CAA 90 bp CCTTGGGAGGATTTCGTTTTATTGGCCCTACAGTACGTCCTACAGTaGGTTGGCCTAAGAACACTTTGTACAATATCTTCCTCAATGGCT +
Preference number: 6 (lower is better)
Translates to: PWEDFVLLALQYVLQ*VGLRTLCTISSSMA
Trigger: AGCCATTGAGGAAGATATTGTACAAAGTGTTCTTAGGCCAACCAACTGTAGGACGTACTGTAGGGCCAATAAAACGAAATCCTCCCAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS TCA 72 bp GATCCATGTTCAAACGATCTCTACTCAGTATATACATaGGGGCAGCTGTACAGAGGGACAGATTCTGATGGT +
Preference number: 6 (lower is better)
Translates to: DPCSNDLYSVYT*GQLYRGTDSDG
Trigger: ACCATCAGAATCTGTCCCTCTGTACAGCTGCCCTCATGTATATACTGAGTAGAGATCGTTTGAACATGGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298767.10
ENST00000489996.1
CDS TCA 72 bp AGATGGAAGAATCAAAAGAGCACGATGTTTCCATGTTaGCAAGACAGTGCCGATTCCGAGCACTATACTCCA +
Preference number: 6 (lower is better)
Translates to: RWKNQKSTMFPC*QDSADSEHYTP
Trigger: TGGAGTATAGTGCTCGGAATCGGCACTGTCTTGTCAACATGGAAACATCGTGCTCTTTTGATTCTTCCATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS TCA 72 bp CTTTGTCTAAGGATAGCTCCAGCATTACCGAGCACCTaGAGCAAAGGTAAAGCAGCTAGCAATGTTCCAAAT +
Preference number: 6 (lower is better)
Translates to: LCLRIAPALPST*SKGKAASNVPN
Trigger: ATTTGGAACATTGCTAGCTGCTTTACCTTTGCTTCAGGTGCTCGGTAATGCTGGAGCTATCCTTAGACAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298767.10
ENST00000372075.2
ENST00000484070.1
CDS GCA 72 bp TCTAAAACTGGTCCCACAACTTACACCCCCTTTCTTTaGCTGATTCAGGCCATCTTTACTCGATTCACTGTT +
Preference number: 6 (lower is better)
Translates to: SKTGPTTYTPFL*LIQAIFTRFTV
Trigger: AACAGTGAATCGAGTAAAGATGGCCTGAATCAGGCAAAGAAAGGGGGTGTAAGTTGTGGGACCAGTTTTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS TCA 72 bp TCTTTACTCGATTCACTGTTTGCTTTGGCTAAGGCCTaGCTGGTGCCGTCCATCAGCTTATCAAAATTTGAT +
Preference number: 6 (lower is better)
Translates to: SLLDSLFALAKA*LVPSISLSKFD
Trigger: ATCAAATTTTGATAAGCTGATGGACGGCACCAGTCAGGCCTTAGCCAAAGCAAACAGTGAATCGAGTAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS GCA 72 bp TCAAAAGAGCACGATGTTTCCATGTTGACAAGACAGTaGCGATTCCGAGCACTATACTCCACTAGATTTATC +
Preference number: 6 (lower is better)
Translates to: SKEHDVSMLTRQ*RFRALYSTRFI
Trigger: GATAAATCTAGTGGAGTATAGTGCTCGGAATCGGCACTGTCTTGTCAACATGGAAACATCGTGCTCTTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS CAA 90 bp TCCACTTTAGGTTTCTTCGGAATTTCTTGGATATCTGGTTTGAAATaGGGCCTCTTCTGCCCTAATTTAGCCATAAATGTGGTCTCTCCC +
Preference number: 6 (lower is better)
Translates to: STLGFFGISWISGLK*GLFCPNLAINVVSP
Trigger: GGGAGAGACCACATTTATGGCTAAATTAGGGCAGAAGAGGCCCAATTTCAAACCAGATATCCAAGAAATTCCGAAGAAACCTAAAGTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS CAA 90 bp ATTGGCCCTACAGTACGTCCTACAGTTGGTTGGCCTAAGAACACTTaGTACAATATCTTCCTCAATGGCTTCATTCAGATTTTCCAATCG +
Preference number: 6 (lower is better)
Translates to: IGPTVRPTVGWPKNT*YNIFLNGFIQIFQS
Trigger: CGATTGGAAAATCTGAATGAAGCCATTGAGGAAGATATTGTACAAAGTGTTCTTAGGCCAACCAACTGTAGGACGTACTGTAGGGCCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS CAA 90 bp ATCAGCTTATCAAAATTTGATGCTCCTTGGGAGGATTTCGTTTTATaGGCCCTACAGTACGTCCTACAGTTGGTTGGCCTAAGAACACTT +
Preference number: 6 (lower is better)
Translates to: ISLSKFDAPWEDFVL*ALQYVLQLVGLRTL
Trigger: AAGTGTTCTTAGGCCAACCAACTGTAGGACGTACTGTAGGGCCAATAAAACGAAATCCTCCCAAGGAGCATCAAATTTTGATAAGCTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS TCA 72 bp GACCACATGACTAATTTTGCTATTAGCTTCAAGTACTaGAGTGACCTCTTCCAACTGAGCAGCTTCACTAGA +
Preference number: 6 (lower is better)
Translates to: DHMTNFAISFKY*SDLFQLSSFTR
Trigger: TCTAGTGAAGCTGCTCAGTTGGAAGAGGTCACTTCAGTACTTGAAGCTAATAGCAAAATTAGTCATGTGGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS CCA 72 bp CGTTTTATTGGCCCTACAGTACGTCCTACAGTTGGTTaGCCTAAGAACACTTTGTACAATATCTTCCTCAAT +
Preference number: 6 (lower is better)
Translates to: RFIGPTVRPTVG*PKNTLYNIFLN
Trigger: ATTGAGGAAGATATTGTACAAAGTGTTCTTAGGCCAACCAACTGTAGGACGTACTGTAGGGCCAATAAAACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS CAA 72 bp GATTTCGTTTTATTGGCCCTACAGTACGTCCTACAGTaGGTTGGCCTAAGAACACTTTGTACAATATCTTCC +
Preference number: 6 (lower is better)
Translates to: DFVLLALQYVLQ*VGLRTLCTISS
Trigger: GGAAGATATTGTACAAAGTGTTCTTAGGCCAACCAACTGTAGGACGTACTGTAGGGCCAATAAAACGAAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS CAA 90 bp TCTGGCCTTTTCCCAAACTGGGAGTTCCAAGTATCATTTGTTTCCTaGATTTCAGAAGCCACTGTAGTTTCTGCATTGGGTTTCTTAGTA +
Preference number: 6 (lower is better)
Translates to: SGLFPNWEFQVSFVS*ISEATVVSALGFLV
Trigger: TACTAAGAAACCCAATGCAGAAACTACAGTGGCTTCTGAAATCAAGGAAACAAATGATACTTGGAACTCCCAGTTTGGGAAAAGGCCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS CAA 90 bp TCTTCTTCCACTTTAGGTTTCTTCGGAATTTCTTGGATATCTGGTTaGAAATTGGGCCTCTTCTGCCCTAATTTAGCCATAAATGTGGTC +
Preference number: 6 (lower is better)
Translates to: SSSTLGFFGISWISG*KLGLFCPNLAINVV
Trigger: GACCACATTTATGGCTAAATTAGGGCAGAAGAGGCCCAATTTCAAACCAGATATCCAAGAAATTCCGAAGAAACCTAAAGTGGAAGAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS GCA 72 bp GCTAAATGCCCAGTCGTTATATTTTCTAGATCAAGATaGTTGTTGTGTACAGTTTCACAGAGCCTTCGGATT +
Preference number: 6 (lower is better)
Translates to: AKCPVVIFSRSR*LLCTVSQSLRI
Trigger: AATCCGAAGGCTCTGTGAAACTGTACACAACAAGCATCTTGATCTAGAAAATATAACGACTGGGCATTTAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298767.10
ENST00000372075.2
CDS GCA 72 bp AAGAAGGAACCCACCGTTATATTTTCTAGATCAAGATaGTTGTTGTGTACAGTTTCACAGAGCCTTCGGATT +
Preference number: 6 (lower is better)
Translates to: KKEPTVIFSRSR*LLCTVSQSLRI
Trigger: AATCCGAAGGCTCTGTGAAACTGTACACAACAAGCATCTTGATCTAGAAAATATAACGGTGGGTTCCTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489996.1
CDS CCA 72 bp CTGAGTAGGTATTGTCACAGTTTTTATCACTTTGGATaGTGGTGCAGGAGCCTTAAAAACTCCATCATCTTT +
Preference number: 6 (lower is better)
Translates to: LSRYCHSFYHFG*WCRSLKNSIIF
Trigger: AAAGATGATGGAGTTTTTAAGGCTCCTGCACCACCATCCAAAGTGATAAAAACTGTGACAATACCTACTCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS CAA 72 bp AGCTACTTATGCTTGCATCATCTTCTACAATTCGGTTaGTGCTCTTTTCTTTCCCAAGTAAAGTGTCCTCCA +
Preference number: 6 (lower is better)
Translates to: SYLCLHHLLQFG*CSFLSQVKCPP
Trigger: TGGAGGACACTTTACTTGGGAAAGAAAAGAGCACAAACCGAATTGTAGAAGATGATGCAAGCATAAGTAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS CAA 72 bp ACAGTACGTCCTACAGTTGGTTGGCCTAAGAACACTTaGTACAATATCTTCCTCAATGGCTTCATTCAGATT +
Preference number: 6 (lower is better)
Translates to: TVRPTVGWPKNT*YNIFLNGFIQI
Trigger: AATCTGAATGAAGCCATTGAGGAAGATATTGTACAAAGTGTTCTTAGGCCAACCAACTGTAGGACGTACTGT
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS CAA 72 bp GTCTTCTCGTCTGCATTTCAGTGCAGTAACTATATCTaGGTAGGGCTGAGTAGGTATTGTCACAGTTTTTAT +
Preference number: 6 (lower is better)
Translates to: VFSSAFQCSNYI*VGLSRYCHSFY
Trigger: ATAAAAACTGTGACAATACCTACTCAGCCCTACCAAGATATAGTTACTGCACTGAAATGCAGACGAGAAGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS CAA 90 bp ATTTATTACAGCTACTTATGCTTGCATCATCTTCTACAATTCGGTTaGTGCTCTTTTCTTTCCCAAGTAAAGTGTCCTCCAAAGGGAAGC +
Preference number: 6 (lower is better)
Translates to: IYYSYLCLHHLLQFG*CSFLSQVKCPPKGS
Trigger: GCTTCCCTTTGGAGGACACTTTACTTGGGAAAGAAAAGAGCACAAACCGAATTGTAGAAGATGATGCAAGCATAAGTAGCTGTAATAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS TCA 72 bp CCAAATTCTACAACATCGTTGAAGTGCTTCACGTGCTaGACAACAGTATATAATTCTTTGTCTTCTCGTCTG +
Preference number: 6 (lower is better)
Translates to: PNSTTSLKCFTC*TTVYNSLSSRL
Trigger: CAGACGAGAAGACAAAGAATTATATACTGTTGTTCAGCACGTGAAGCACTTCAACGATGTTGTAGAATTTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS CAA 72 bp ACTTTAGGTTTCTTCGGAATTTCTTGGATATCTGGTTaGAAATTGGGCCTCTTCTGCCCTAATTTAGCCATA +
Preference number: 6 (lower is better)
Translates to: TLGFFGISWISG*KLGLFCPNLAI
Trigger: TATGGCTAAATTAGGGCAGAAGAGGCCCAATTTCAAACCAGATATCCAAGAAATTCCGAAGAAACCTAAAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS CAA 90 bp TCAAAATCATTATCCCATTCAAACAAACCAGTTCTAACAGATCCCTaGATTGGAGATATTTCTGATGGTGATTCTGGCCTTTTCCCAAAC +
Preference number: 6 (lower is better)
Translates to: SKSLSHSNKPVLTDP*IGDISDGDSGLFPN
Trigger: GTTTGGGAAAAGGCCAGAATCACCATCAGAAATATCTCCAATCAAGGGATCTGTTAGAACTGGTTTGTTTGAATGGGATAATGATTTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298767.10
CDS CCA 72 bp TGTTCCAAATATTCAATCACTCTAGAGATAGATTTCTaGCCAGTTGTTCCAACAGCACAAGTGAGATTCATA +
Preference number: 6 (lower is better)
Translates to: CSKYSITLEIDF*PVVPTAQVRFI
Trigger: TATGAATCTCACTTGTGCTGTTGGAACAACTGGCCAGAAATCTATCTCTAGAGTGATTGAATATTTGGAACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298767.10
ENST00000372075.2
ENST00000484070.1