RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for VXN (Homo sapiens)

Ensembl gene IDs: ENSG00000169085

Ensembl transcript IDs: ENST00000305454.8, ENST00000450307.7, ENST00000460144.5, ENST00000480005.1, ENST00000484919.5, ENST00000485639.1, ENST00000488582.1, ENST00000521495.5, ENST00000521813.5, ENST00000522977.5

Found 434 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCGGGTGGGCTGTGGGCGGCCGCGCGGTCTGGAGCCGCCCAAACCTaGGGCGGTCGCCAGGGTCCCTGCGGTCTCCGCGGTGGGGCAGCA +
Preference number: 1 (lower is better)
Translates to: PGGLWAAARSGAAQT*GGRQGPCGLRGGAA
Trigger: TGCTGCCCCACCGCGGAGACCGCAGGGACCCTGGCGACCGCCGCAGGTTTGGGCGGCTCCAGACCGCGCGGCCGCCCACAGCCCACCCGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450307.7
ENST00000460144.5
3UTR CCA 90 bp CTGGCAGAGGCTTTGGCCGGGTGGGCTGTGGGCGGCCGCGCGGTCTaGAGCCGCCCAAACCTGCGGCGGTCGCCAGGGTCCCTGCGGTCT +
Preference number: 1 (lower is better)
Translates to: LAEALAGWAVGGRAV*SRPNLRRSPGSLRS
Trigger: AGACCGCAGGGACCCTGGCGACCGCCGCAGGTTTGGGCGGCTCCAGACCGCGCGGCCGCCCACAGCCCACCCGGCCAAAGCCTCTGCCAG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450307.7
ENST00000460144.5
3UTR CCA 90 bp CCAGGGTCCCTGCGGTCTCCGCGGTGGGGCAGCAGCTCCAGGGGCTaGTGCGTGTACAGGTCCGACTCGATCACCACCTGCCGGGCGGGG +
Preference number: 1 (lower is better)
Translates to: PGSLRSPRWGSSSRG*CVYRSDSITTCRAG
Trigger: CCCCGCCCGGCAGGTGGTGATCGAGTCGGACCTGTACACGCACCAGCCCCTGGAGCTGCTGCCCCACCGCGGAGACCGCAGGGACCCTGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460144.5
3UTR CCA 90 bp CGCCCAAACCTGCGGCGGTCGCCAGGGTCCCTGCGGTCTCCGCGGTaGGGCAGCAGCTCCAGGGGCTGGTGCGTGTACAGGTCCGACTCG +
Preference number: 1 (lower is better)
Translates to: RPNLRRSPGSLRSPR*GSSSRGWCVYRSDS
Trigger: CGAGTCGGACCTGTACACGCACCAGCCCCTGGAGCTGCTGCCCCACCGCGGAGACCGCAGGGACCCTGGCGACCGCCGCAGGTTTGGGCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450307.7
ENST00000460144.5
3UTR CCA 90 bp CAGAAATCCCCACGGGTCTGGCAGAGGCTTTGGCCGGGTGGGCTGTaGGCGGCCGCGCGGTCTGGAGCCGCCCAAACCTGCGGCGGTCGC +
Preference number: 1 (lower is better)
Translates to: QKSPRVWQRLWPGGL*AAARSGAAQTCGGR
Trigger: GCGACCGCCGCAGGTTTGGGCGGCTCCAGACCGCGCGGCCGCCCACAGCCCACCCGGCCAAAGCCTCTGCCAGACCCGTGGGGATTTCTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450307.7
ENST00000460144.5
3UTR CCA 90 bp CATGGGTTTGTGTTGGCCTCTCGAGGGTCTGTCAACCAGGCGGCCTaGTGCTCTTCTGGGGAAGGAAGGATCAGGACAGTGGGAGGCCAC +
Preference number: 1 (lower is better)
Translates to: HGFVLASRGSVNQAA*CSSGEGRIRTVGGH
Trigger: GTGGCCTCCCACTGTCCTGATCCTTCCTTCCCCAGAAGAGCACCAGGCCGCCTGGTTGACAGACCCTCGAGAGGCCAACACAAACCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480005.1
3UTR CCA 90 bp GACCCAGGATTATTGGCCTCATTAAAAGATAATTTGCAGCTGGCATaGGTTTGTGTTGGCCTCTCGAGGGTCTGTCAACCAGGCGGCCTG +
Preference number: 1 (lower is better)
Translates to: DPGLLASLKDNLQLA*VCVGLSRVCQPGGL
Trigger: CAGGCCGCCTGGTTGACAGACCCTCGAGAGGCCAACACAAACCCATGCCAGCTGCAAATTATCTTTTAATGAGGCCAATAATCCTGGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480005.1
3UTR TCA 90 bp GAGGGACATTTCTTTCCTGTGCCCTATCCCAGGGTAATCAATGAGTaGGGGAGGATAATGGGTTTGGACCAGCTACTAGCAGAGGTGCGT +
Preference number: 1 (lower is better)
Translates to: EGHFFPVPYPRVINE*GRIMGLDQLLAEVR
Trigger: ACGCACCTCTGCTAGTAGCTGGTCCAAACCCATTATCCTCCCTCACTCATTGATTACCCTGGGATAGGGCACAGGAAAGAAATGTCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
ENST00000522977.5
3UTR TCA 90 bp CTTCGAGGGACATTTCTTTCCTGTGCCCTATCCCAGGGTAATCAATaGGTGAGGGAGGATAATGGGTTTGGACCAGCTACTAGCAGAGGT +
Preference number: 1 (lower is better)
Translates to: LRGTFLSCALSQGNQ*VREDNGFGPATSRG
Trigger: ACCTCTGCTAGTAGCTGGTCCAAACCCATTATCCTCCCTCACTCATTGATTACCCTGGGATAGGGCACAGGAAAGAAATGTCCCTCGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
ENST00000522977.5
3UTR TCA 90 bp ACCTGCTGTCTGGTTCCACTACCTGGTATCTGGTCCTGTAATCTCTaGAGGCCTCCATTTCCCCCTCTGCAGATTGGGAATAATTGTGCT +
Preference number: 1 (lower is better)
Translates to: TCCLVPLPGIWSCNL*RPPFPPLQIGNNCA
Trigger: AGCACAATTATTCCCAATCTGCAGAGGGGGAAATGGAGGCCTTCAGAGATTACAGGACCAGATACCAGGTAGTGGAACCAGACAGCAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
3UTR GCA 90 bp GAAAAACCCTCCTGCTTAATCCTAGGGAAACAGTTGATGAGGCGCTaGAGAGACCCAGGATTATTGGCCTCATTAAAAGATAATTTGCAG +
Preference number: 1 (lower is better)
Translates to: EKPSCLILGKQLMRR*RDPGLLASLKDNLQ
Trigger: CTGCAAATTATCTTTTAATGAGGCCAATAATCCTGGGTCTCTGCAGCGCCTCATCAACTGTTTCCCTAGGATTAAGCAGGAGGGTTTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480005.1
3UTR GCA 90 bp GCAGGGGATCTTGAACTTACTCATGAGATATTTCTGACGCCTGCATaGCTATGGGAGGTTCTGAATATGGCTCGTGATTACATTCATCTA +
Preference number: 1 (lower is better)
Translates to: AGDLELTHEIFLTPA*LWEVLNMARDYIHL
Trigger: TAGATGAATGTAATCACGAGCCATATTCAGAACCTCCCATAGGCATGCAGGCGTCAGAAATATCTCATGAGTAAGTTCAAGATCCCCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480005.1
3UTR GCA 90 bp CGTAATTGTAGGATCCTCTGTTACGACCAGCATAGGTTACTGGTTTaGTCCCTAACTTTGTTCTGGACTCCAACATCTCTATTGAATGAG +
Preference number: 1 (lower is better)
Translates to: RNCRILCYDQHRLLV*SLTLFWTPTSLLNE
Trigger: CTCATTCAATAGAGATGTTGGAGTCCAGAACAAAGTTAGGGAGCAAACCAGTAACCTATGCTGGTCGTAACAGAGGATCCTACAATTACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
3UTR TCA 90 bp ACAAGGCATGTGTCACTAATCCCTCCATGGGCAAGAATTACTAATTaGCCACAGCATTCTTCTATCTCAGATTCCATCTTTACACAGTAC +
Preference number: 1 (lower is better)
Translates to: TRHVSLIPPWARITN*PQHSSISDSIFTQY
Trigger: GTACTGTGTAAAGATGGAATCTGAGATAGAAGAATGCTGTGGTCAATTAGTAATTCTTGCCCATGGAGGGATTAGTGACACATGCCTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
3UTR CCA 90 bp CACAGTACTTCGGGCAGCCTCTACCCATCAATCATGTTTAGTGTTTaGGATGAAAATCATTTATTAACCTTGGTCCTTCTCTATGTTCTG +
Preference number: 1 (lower is better)
Translates to: HSTSGSLYPSIMFSV*DENHLLTLVLLYVL
Trigger: CAGAACATAGAGAAGGACCAAGGTTAATAAATGATTTTCATCCCAAACACTAAACATGATTGATGGGTAGAGGCTGCCCGAAGTACTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
3UTR CCA 90 bp GATCTTGAACTTACTCATGAGATATTTCTGACGCCTGCATGCCTATaGGAGGTTCTGAATATGGCTCGTGATTACATTCATCTAATTAAC +
Preference number: 1 (lower is better)
Translates to: DLELTHEIFLTPACL*EVLNMARDYIHLIN
Trigger: GTTAATTAGATGAATGTAATCACGAGCCATATTCAGAACCTCCCATAGGCATGCAGGCGTCAGAAATATCTCATGAGTAAGTTCAAGATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480005.1
3UTR-3UTR GCA 90 bp AGGCTTTGGCCGGGTGGGCTGTGGGCGGCCGCGCGGTCTGGAGCCGCCCAAACCCTAACCCCTCTCTTCTaGAGCTTCTCAGGATTTGCT +
Preference number: 2 (lower is better)
Translates to: RLWPGGLWAAARSGAAQTLTPLF*SFSGFA
Trigger: AGCAAATCCTGAGAAGCTGCAGAAGAGAGGGGTTAG...GGTTTGGGCGGCTCCAGACCGCGCGGCCGCCCACAGCCCACCCGGCCAAAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450307.7
3UTR-3UTR GCA 90 bp CTTGTCCACATTTTCCGGAGGATGCCGGGGACGCCGCAGGAAGCACTGCCTGTCAGCTCCAGGGGCTGGTaGGTGTACAGGTCCGACTCG +
Preference number: 2 (lower is better)
Translates to: LVHIFRRMPGTPQEALPVSSRGW*VYRSDS
Trigger: CGAGTCGGACCTGTACACGCACCAGCCCCTGGAGCT...GACAGGCAGTGCTTCCTGCGGCGTCCCCGGCATCCTCCGGAAAATGTGGACAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000450307.7
ENST00000460144.5
3UTR-3UTR TCA 90 bp GGTTCAGAAATCCCCACGGGTCTGGCAGAGGCTTTGGCCGGGTGGGCTGTGGGCTCCCAGGGTAATCAATaGGTGAGGGAGGATAATGGG +
Preference number: 2 (lower is better)
Translates to: GSEIPTGLAEALAGWAVGSQGNQ*VREDNG
Trigger: CCCATTATCCTCCCTCACTCATTGATTACCCTGGGA...GCCCACAGCCCACCCGGCCAAAGCCTCTGCCAGACCCGTGGGGATTTCTGAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450307.7
ENST00000460144.5
3UTR-3UTR TCA 90 bp CTTGTCCACATTTTCCGGAGGATGCCGGGGACGCCGCAGGAAGCACTGCCTGTCTCCCAGGGTAATCAATaGGTGAGGGAGGATAATGGG +
Preference number: 2 (lower is better)
Translates to: LVHIFRRMPGTPQEALPVSQGNQ*VREDNG
Trigger: CCCATTATCCTCCCTCACTCATTGATTACCCTGGGA...GACAGGCAGTGCTTCCTGCGGCGTCCCCGGCATCCTCCGGAAAATGTGGACAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000450307.7
ENST00000460144.5
ENST00000522977.5
3UTR-3UTR GCA 90 bp ACCACAGCATTCTTCTATCTCAGATTCCATCTTTACACAGTACTTCGGGCAGCCGGAGCCGCCCAAACCTaGGGCGGTCGCCAGGGTCCC +
Preference number: 2 (lower is better)
Translates to: TTAFFYLRFHLYTVLRAAGAAQT*GGRQGP
Trigger: GGGACCCTGGCGACCGCCGCAGGTTTGGGCGGCTCC...GGCTGCCCGAAGTACTGTGTAAAGATGGAATCTGAGATAGAAGAATGCTGTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450307.7
ENST00000460144.5
3UTR-3UTR GCA 90 bp TCCAACATATCAGAGTCTTCTTTTCAATGGTTGCCCCCAGAGACACACTCTCACGGAGCCGCCCAAACCTaGGGCGGTCGCCAGGGTCCC +
Preference number: 2 (lower is better)
Translates to: SNISESSFQWLPPETHSHGAAQT*GGRQGP
Trigger: GGGACCCTGGCGACCGCCGCAGGTTTGGGCGGCTCC...GTGAGAGTGTGTCTCTGGGGGCAACCATTGAAAAGAAGACTCTGATATGTTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450307.7
ENST00000460144.5
3UTR-3UTR CCA 90 bp CTCTGTTACGACCAGCATAGGTTACTGGTTTGCTCCCTAACTTTGTTCTGGACTCTGCGGTCTCCGCGGTaGGGCAGCAGCTCCAGGGGC +
Preference number: 2 (lower is better)
Translates to: LCYDQHRLLVCSLTLFWTLRSPR*GSSSRG
Trigger: GCCCCTGGAGCTGCTGCCCCACCGCGGAGACCGCAG...AGTCCAGAACAAAGTTAGGGAGCAAACCAGTAACCTATGCTGGTCGTAACAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450307.7
ENST00000460144.5
3UTR-3UTR GCA 90 bp GTGTGGCTCAGTTTCAATCCTGAAGGTTTTTCCTCTTGTCCGGGGAACCTTGGCCGCCGCAGGAAGCACTaGCTGTCAGTGGTAGAGAGG +
Preference number: 2 (lower is better)
Translates to: VWLSFNPEGFSSCPGNLGRRRKH*LSVVER
Trigger: CCTCTCTACCACTGACAGGCAGTGCTTCCTGCGGCG...GCCAAGGTTCCCCGGACAAGAGGAAAAACCTTCAGGATTGAAACTGAGCCACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000450307.7
ENST00000460144.5
ENST00000522977.5
3UTR-3UTR CCA 90 bp AAAACTTCCCCAAGTCAGTTGCTAGAGAGTAGGCAAAGCAGGGAGTCCACTGGAAGCAGCTCCAGGGGCTaGTGCGTGTACAGGTCCGAC +
Preference number: 2 (lower is better)
Translates to: KTSPSQLLESRQSRESTGSSSRG*CVYRSD
Trigger: GTCGGACCTGTACACGCACCAGCCCCTGGAGCTGCT...TCCAGTGGACTCCCTGCTTTGCCTACTCTCTAGCAACTGACTTGGGGAAGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000450307.7
ENST00000460144.5
3UTR-3UTR GCA 90 bp CTTGTCCACATTTTCCGGAGGATGCCGGGGACGCCGCAGGAAGCACTGCCTGTCGGGGCAGTTTTATATTaGCTTCGAGGGACATTTCTT +
Preference number: 2 (lower is better)
Translates to: LVHIFRRMPGTPQEALPVGAVLY*LRGTFL
Trigger: AAGAAATGTCCCTCGAAGGCAATATAAAACTGCCCC...GACAGGCAGTGCTTCCTGCGGCGTCCCCGGCATCCTCCGGAAAATGTGGACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000450307.7
ENST00000460144.5
ENST00000522977.5
3UTR-3UTR GCA 90 bp AAAACTTCCCCAAGTCAGTTGCTAGAGAGTAGGCAAAGCAGGGAGTCCACTGGACAGCTCCCTTCTCTGTaGCCATGGCTGTCGCCTCCA +
Preference number: 2 (lower is better)
Translates to: KTSPSQLLESRQSRESTGQLPSL*PWLSPP
Trigger: TGGAGGCGACAGCCATGGGCACAGAGAAGGGAGCTG...TCCAGTGGACTCCCTGCTTTGCCTACTCTCTAGCAACTGACTTGGGGAAGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450307.7
ENST00000460144.5
3UTR-3UTR CCA 90 bp CAATGGTTGAAGAGCAGAGATAGCAAGGTGGAATCCCAGAGGCCCAGGCCTCTCCCCTCTCGCTTCTCATaGATTCACCTGGAGATATGG +
Preference number: 2 (lower is better)
Translates to: QWLKSRDSKVESQRPRPLPSRFS*IHLEIW
Trigger: CCATATCTCCAGGTGAATCCATGAGAAGCGAGAGGG...GAGAGGCCTGGGCCTCTGGGATTCCACCTTGCTATCTCTGCTCTTCAACCATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
3UTR-3UTR CCA 90 bp GCATTCTTCTATCTCAGATTCCATCTTTACACAGTACTTCGGGCAGCCTCTACCAGCAGCTCCAGGGGCTaGTGCGTGTACAGGTCCGAC +
Preference number: 2 (lower is better)
Translates to: AFFYLRFHLYTVLRAASTSSSRG*CVYRSD
Trigger: GTCGGACCTGTACACGCACCAGCCCCTGGAGCTGCT...GGTAGAGGCTGCCCGAAGTACTGTGTAAAGATGGAATCTGAGATAGAAGAATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450307.7
ENST00000460144.5
3UTR-3UTR CCA 90 bp TTAAAAACAAACGTAATTGTAGGATCCTCTGTTACGACCAGCATAGGTTACTGGCTGCGGTCTCCGCGGTaGGGCAGCAGCTCCAGGGGC +
Preference number: 2 (lower is better)
Translates to: LKTNVIVGSSVTTSIGYWLRSPR*GSSSRG
Trigger: GCCCCTGGAGCTGCTGCCCCACCGCGGAGACCGCAG...CCAGTAACCTATGCTGGTCGTAACAGAGGATCCTACAATTACGTTTGTTTTTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450307.7
ENST00000460144.5
3UTR-3UTR GCA 90 bp ACCACAGCATTCTTCTATCTCAGATTCCATCTTTACACAGTACTTCGGGCAGCCCGCCGCAGGAAGCACTaGCTGTCAGTGGTAGAGAGG +
Preference number: 2 (lower is better)
Translates to: TTAFFYLRFHLYTVLRAARRRKH*LSVVER
Trigger: CCTCTCTACCACTGACAGGCAGTGCTTCCTGCGGCG...GGCTGCCCGAAGTACTGTGTAAAGATGGAATCTGAGATAGAAGAATGCTGTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450307.7
ENST00000460144.5
3UTR-3UTR CCA 90 bp CCAGGCCTCTCAGCCACCCTCTCGCTTCTCATGGATTCACCTGGAGATATGGAATCCTTGGGGAAGGGCTaGATACTCTTCAGTCATCTT +
Preference number: 2 (lower is better)
Translates to: PGLSATLSLLMDSPGDMESLGKG*ILFSHL
Trigger: AAGATGACTGAAGAGTATCCAGCCCTTCCCCAAGGA...TTCCATATCTCCAGGTGAATCCATGAGAAGCGAGAGGGTGGCTGAGAGGCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450307.7
ENST00000460144.5
3UTR-3UTR CCA 90 bp TTGTACTTGACACACTTCTTAACCGGTGGGCAGGGGATCTTGAACTTACTCATGGTCAACCAGGCGGCCTaGTGCTCTTCTGGGGAAGGA +
Preference number: 2 (lower is better)
Translates to: LYLTHFLTGGQGILNLLMVNQAA*CSSGEG
Trigger: TCCTTCCCCAGAAGAGCACCAGGCCGCCTGGTTGAC...CATGAGTAAGTTCAAGATCCCCTGCCCACCGGTTAAGAAGTGTGTCAAGTACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480005.1
3UTR-3UTR TCA 90 bp GTTTTTCCTCTTGTCCGGGGAACCTTGGCCAACACAGGGCACTTGAAGAGGGTCGCTCAGTTTCAATCCTaGAGGTTTTTCCTCTTGTCC +
Preference number: 2 (lower is better)
Translates to: VFPLVRGTLANTGHLKRVAQFQS*RFFLLS
Trigger: GGACAAGAGGAAAAACCTTCAGGATTGAAACTGAGC...GACCCTCTTCAAGTGCCCTGTGTTGGCCAAGGTTCCCCGGACAAGAGGAAAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
ENST00000522977.5
3UTR-3UTR TCA 90 bp CACCCTCTCGCTTCTCATGGATTCACCTGGAGATATGGAAATAGGGAACTCAGCCCAACACAGGGCACTTaGAGAGGGTCACCTTTAGTC +
Preference number: 2 (lower is better)
Translates to: HPLASHGFTWRYGNRELSPTQGT*RGSPLV
Trigger: GACTAAAGGTGACCCTCTTCAAGTGCCCTGTGTTGG...GCTGAGTTCCCTATTTCCATATCTCCAGGTGAATCCATGAGAAGCGAGAGGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450307.7
ENST00000460144.5
3UTR-3UTR TCA 90 bp TGCGTGTGGCTCAGTTTCAATCCTGAAGGTTTTTCCTCTTGTCCGGGGAACCTTTCCCAGGGTAATCAATaGGTGAGGGAGGATAATGGG +
Preference number: 2 (lower is better)
Translates to: CVWLSFNPEGFSSCPGNLSQGNQ*VREDNG
Trigger: CCCATTATCCTCCCTCACTCATTGATTACCCTGGGA...AAGGTTCCCCGGACAAGAGGAAAAACCTTCAGGATTGAAACTGAGCCACACGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
ENST00000522977.5
3UTR-3UTR GCA 90 bp GGCCTCCATTTCCCCCTCTGCAGATTGGGAATAATTGTGCTTTCTTCCACAGGGGAGAAGTTAAGGACCTaGTGTCTGGTTCCACTACCT +
Preference number: 2 (lower is better)
Translates to: GLHFPLCRLGIIVLSSTGEKLRT*CLVPLP
Trigger: AGGTAGTGGAACCAGACAGCAGGTCCTTAACTTCTC...CCCTGTGGAAGAAAGCACAATTATTCCCAATCTGCAGAGGGGGAAATGGAGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
3UTR-3UTR GCA 90 bp TTCTGGACTCCAACATCTCTATTGAATGAGACTTTTGAACAGTCCTCTGGGATAAGCTCCAGGGGCTGGTaGGTGTACAGGTCCGACTCG +
Preference number: 2 (lower is better)
Translates to: FWTPTSLLNETFEQSSGISSRGW*VYRSDS
Trigger: CGAGTCGGACCTGTACACGCACCAGCCCCTGGAGCT...TATCCCAGAGGACTGTTCAAAAGTCTCATTCAATAGAGATGTTGGAGTCCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450307.7
ENST00000460144.5
3UTR-3UTR GCA 90 bp AGTACTTCGGGCAGCCTCTACCCATCAATCATGTTTAGTGTTTGGGATGAAAATCGCCGCAGGAAGCACTaGCTGTCAGTGGTAGAGAGG +
Preference number: 2 (lower is better)
Translates to: STSGSLYPSIMFSVWDENRRRKH*LSVVER
Trigger: CCTCTCTACCACTGACAGGCAGTGCTTCCTGCGGCG...ATTTTCATCCCAAACACTAAACATGATTGATGGGTAGAGGCTGCCCGAAGTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450307.7
ENST00000460144.5
3UTR-3UTR GCA 90 bp ACAAACGTAATTGTAGGATCCTCTGTTACGACCAGCATAGGTTACTGGTTTGCTACATTTTCCGGAGGATaGCGGGGACGCCGCAGGAAG +
Preference number: 2 (lower is better)
Translates to: TNVIVGSSVTTSIGYWFATFSGG*RGRRRK
Trigger: CTTCCTGCGGCGTCCCCGGCATCCTCCGGAAAATGT...AGCAAACCAGTAACCTATGCTGGTCGTAACAGAGGATCCTACAATTACGTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450307.7
ENST00000460144.5
3UTR-3UTR CCA 90 bp ACCTCCCAAATGACTTCTCCAAGCCTAAAGAGTGGCGTTAATGAAGTGGAAACCGGCATGGGTTTGTGTTaGCCTCTCGAGGGTCTGTCA +
Preference number: 2 (lower is better)
Translates to: TSQMTSPSLKSGVNEVETGMGLC*PLEGLS
Trigger: TGACAGACCCTCGAGAGGCCAACACAAACCCATGCC...GGTTTCCACTTCATTAACGCCACTCTTTAGGCTTGGAGAAGTCATTTGGGAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480005.1
3UTR-3UTR TCA 90 bp GGCCTCCATTTCCCCCTCTGCAGATTGGGAATAATTGTGCTTTCTTCCACAGGGGCTCAGTTTCAATCCTaGAGGTTTTTCCTCTTGTCC +
Preference number: 2 (lower is better)
Translates to: GLHFPLCRLGIIVLSSTGAQFQS*RFFLLS
Trigger: GGACAAGAGGAAAAACCTTCAGGATTGAAACTGAGC...CCCTGTGGAAGAAAGCACAATTATTCCCAATCTGCAGAGGGGGAAATGGAGGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
3UTR-3UTR TCA 90 bp GGCCTCCATTTCCCCCTCTGCAGATTGGGAATAATTGTGCTTTCTTCCACAGGGAGGGTAATCAATGAGTaGGGGAGGATAATGGGTTTG +
Preference number: 2 (lower is better)
Translates to: GLHFPLCRLGIIVLSSTGRVINE*GRIMGL
Trigger: CAAACCCATTATCCTCCCTCACTCATTGATTACCCT...CCCTGTGGAAGAAAGCACAATTATTCCCAATCTGCAGAGGGGGAAATGGAGGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
3UTR-3UTR TCA 90 bp CAATGGTTGAAGAGCAGAGATAGCAAGGTGGAATCCCAGAGGCCCAGGCCTCTCTGTACCTTGTCAAGGTaGAGTAAATGCAGTAATGGA +
Preference number: 2 (lower is better)
Translates to: QWLKSRDSKVESQRPRPLCTLSR*SKCSNG
Trigger: TCCATTACTGCATTTACTTCACCTTGACAAGGTACA...GAGAGGCCTGGGCCTCTGGGATTCCACCTTGCTATCTCTGCTCTTCAACCATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
3UTR-3UTR GCA 90 bp GGCCTCCATTTCCCCCTCTGCAGATTGGGAATAATTGTGCTTTCTTCCACAGGGCTCCATTTCCCCCTCTaGAGATTGGGAATAATTGTG +
Preference number: 2 (lower is better)
Translates to: GLHFPLCRLGIIVLSSTGLHFPL*RLGIIV
Trigger: CACAATTATTCCCAATCTGCAGAGGGGGAAATGGAG...CCCTGTGGAAGAAAGCACAATTATTCCCAATCTGCAGAGGGGGAAATGGAGGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
3UTR-3UTR GCA 90 bp AAATCACTTTCAGATATGAGGATCTGGTGTTCAGAGTCTAAAACAATGGTTGAAGACTCGATCACCACCTaGCGGGCGGGGGAAACGCGG +
Preference number: 2 (lower is better)
Translates to: KSLSDMRIWCSESKTMVEDSITT*RAGETR
Trigger: CCGCGTTTCCCCCGCCCGGCAGGTGGTGATCGAGTC...TTCAACCATTGTTTTAGACTCTGAACACCAGATCCTCATATCTGAAAGTGATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460144.5
3UTR-3UTR CCA 90 bp CATAGGTTACTGGTTTGCTCCCTAACTTTGTTCTGGACTCCAACATCTCTATTGGCAGAGATAGCAAGGTaGAATCCCAGAGGCCCAGGC +
Preference number: 2 (lower is better)
Translates to: HRLLVCSLTLFWTPTSLLAEIAR*NPRGPG
Trigger: GCCTGGGCCTCTGGGATTCCACCTTGCTATCTCTGC...CAATAGAGATGTTGGAGTCCAGAACAAAGTTAGGGAGCAAACCAGTAACCTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
3UTR-3UTR TCA 90 bp TCACACATAGCAGTTGAGTCTGAGACCTGTAATGTGGCCAAACACTTCTTTGTACAGCTTTCAGGAGACTaGGGTGGGAGGATGGATCTC +
Preference number: 2 (lower is better)
Translates to: SHIAVESETCNVAKHFFVQLSGD*GGRMDL
Trigger: GAGATCCATCCTCCCACCTCAGTCTCCTGAAAGCTG...TACAAAGAAGTGTTTGGCCACATTACAGGTCTCAGACTCAACTGCTATGTGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
3UTR-3UTR GCA 90 bp TTGTACTTGACACACTTCTTAACCGGTGGGCAGGGGATCTTGAACTTACTCATGCAGTTGATGAGGCGCTaGAGAGACCCAGGATTATTG +
Preference number: 2 (lower is better)
Translates to: LYLTHFLTGGQGILNLLMQLMRR*RDPGLL
Trigger: CAATAATCCTGGGTCTCTGCAGCGCCTCATCAACTG...CATGAGTAAGTTCAAGATCCCCTGCCCACCGGTTAAGAAGTGTGTCAAGTACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480005.1
3UTR-3UTR CCA 90 bp CAATGGTTGAAGAGCAGAGATAGCAAGGTGGAATCCCAGAGGCCCAGGCCTCTCCTTTGTATCAACATATaGCAATTTCCAGCACTGTCT +
Preference number: 2 (lower is better)
Translates to: QWLKSRDSKVESQRPRPLLCINI*QFPALS
Trigger: AGACAGTGCTGGAAATTGCCATATGTTGATACAAAG...GAGAGGCCTGGGCCTCTGGGATTCCACCTTGCTATCTCTGCTCTTCAACCATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
3UTR-3UTR CCA 90 bp TTCTGGACTCCAACATCTCTATTGAATGAGACTTTTGAACAGTCCTCTGGGATAGCAGAGATAGCAAGGTaGAATCCCAGAGGCCCAGGC +
Preference number: 2 (lower is better)
Translates to: FWTPTSLLNETFEQSSGIAEIAR*NPRGPG
Trigger: GCCTGGGCCTCTGGGATTCCACCTTGCTATCTCTGC...TATCCCAGAGGACTGTTCAAAAGTCTCATTCAATAGAGATGTTGGAGTCCAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
3UTR-3UTR CCA 90 bp TTAAAAACAAACGTAATTGTAGGATCCTCTGTTACGACCAGCATAGGTTACTGGAAATCCCCACGGGTCTaGCAGAGGCTTTGGCCGGGT +
Preference number: 2 (lower is better)
Translates to: LKTNVIVGSSVTTSIGYWKSPRV*QRLWPG
Trigger: ACCCGGCCAAAGCCTCTGCCAGACCCGTGGGGATTT...CCAGTAACCTATGCTGGTCGTAACAGAGGATCCTACAATTACGTTTGTTTTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450307.7
ENST00000460144.5
3UTR-3UTR CCA 90 bp CTTAAAAACAAACGTAATTGTAGGATCCTCTGTTACGACCAGCATAGGTTACTGAAATCCCCACGGGTCTaGCAGAGGCTTTGGCCGGGT +
Preference number: 2 (lower is better)
Translates to: LKNKRNCRILCYDQHRLLKSPRV*QRLWPG
Trigger: ACCCGGCCAAAGCCTCTGCCAGACCCGTGGGGATTT...CAGTAACCTATGCTGGTCGTAACAGAGGATCCTACAATTACGTTTGTTTTTAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450307.7
ENST00000460144.5
3UTR-3UTR TCA 90 bp GTTTCAATCCTGAAGGTTTTTCCTCTTGTCCGGGGAACCTTGGCCAACACAGGGTGTACCTTGTCAAGGTaGAGTAAATGCAGTAATGGA +
Preference number: 2 (lower is better)
Translates to: VSILKVFPLVRGTLANTGCTLSR*SKCSNG
Trigger: TCCATTACTGCATTTACTTCACCTTGACAAGGTACA...CCCTGTGTTGGCCAAGGTTCCCCGGACAAGAGGAAAAACCTTCAGGATTGAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
ENST00000522977.5
3UTR-3UTR TCA 90 bp AGTACTTCGGGCAGCCTCTACCCATCAATCATGTTTAGTGTTTGGGATGAAAATTGGTCCTGTAATCTCTaGAGGCCTCCATTTCCCCCT +
Preference number: 2 (lower is better)
Translates to: STSGSLYPSIMFSVWDENWSCNL*RPPFPP
Trigger: AGGGGGAAATGGAGGCCTTCAGAGATTACAGGACCA...ATTTTCATCCCAAACACTAAACATGATTGATGGGTAGAGGCTGCCCGAAGTACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
3UTR-3UTR GCA 90 bp ACCACAGCATTCTTCTATCTCAGATTCCATCTTTACACAGTACTTCGGGCAGCCGAGAAGTTAAGGACCTaGTGTCTGGTTCCACTACCT +
Preference number: 2 (lower is better)
Translates to: TTAFFYLRFHLYTVLRAAEKLRT*CLVPLP
Trigger: AGGTAGTGGAACCAGACAGCAGGTCCTTAACTTCTC...GGCTGCCCGAAGTACTGTGTAAAGATGGAATCTGAGATAGAAGAATGCTGTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
3UTR CAA 90 bp AGTGGAAACCATGAAAAACCCTCCTGCTTAATCCTAGGGAAACAGTaGATGAGGCGCTGCAGAGACCCAGGATTATTGGCCTCATTAAAA +
Preference number: 2 (lower is better)
Translates to: SGNHEKPSCLILGKQ*MRRCRDPGLLASLK
Trigger: TTTTAATGAGGCCAATAATCCTGGGTCTCTGCAGCGCCTCATCAACTGTTTCCCTAGGATTAAGCAGGAGGGTTTTTCATGGTTTCCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480005.1
3UTR-3UTR TCA 90 bp GCATTCTTCTATCTCAGATTCCATCTTTACACAGTACTTCGGGCAGCCTCTACCGCTCAGTTTCAATCCTaGAGGTTTTTCCTCTTGTCC +
Preference number: 2 (lower is better)
Translates to: AFFYLRFHLYTVLRAASTAQFQS*RFFLLS
Trigger: GGACAAGAGGAAAAACCTTCAGGATTGAAACTGAGC...GGTAGAGGCTGCCCGAAGTACTGTGTAAAGATGGAATCTGAGATAGAAGAATGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
3UTR-3UTR TCA 90 bp TCACACATAGCAGTTGAGTCTGAGACCTGTAATGTGGCCAAACACTTCTTTGTATCCCAGGGTAATCAATaGGTGAGGGAGGATAATGGG +
Preference number: 2 (lower is better)
Translates to: SHIAVESETCNVAKHFFVSQGNQ*VREDNG
Trigger: CCCATTATCCTCCCTCACTCATTGATTACCCTGGGA...TACAAAGAAGTGTTTGGCCACATTACAGGTCTCAGACTCAACTGCTATGTGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
3UTR-3UTR TCA 90 bp GTGTGGCTCAGTTTCAATCCTGAAGGTTTTTCCTCTTGTCCGGGGAACCTTGGCATAGTGCTTTGTCCTTaGAAATTGTACCTTGTCAAG +
Preference number: 2 (lower is better)
Translates to: VWLSFNPEGFSSCPGNLGIVLCP*KLYLVK
Trigger: CTTGACAAGGTACAATTTTCAAGGACAAAGCACTAT...GCCAAGGTTCCCCGGACAAGAGGAAAAACCTTCAGGATTGAAACTGAGCCACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
ENST00000522977.5
3UTR-3UTR TCA 90 bp GTTTCAATCCTGAAGGTTTTTCCTCTTGTCCGGGGAACCTTGGCCAACACAGGGATAGTGCTTTGTCCTTaGAAATTGTACCTTGTCAAG +
Preference number: 2 (lower is better)
Translates to: VSILKVFPLVRGTLANTGIVLCP*KLYLVK
Trigger: CTTGACAAGGTACAATTTTCAAGGACAAAGCACTAT...CCCTGTGTTGGCCAAGGTTCCCCGGACAAGAGGAAAAACCTTCAGGATTGAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
ENST00000522977.5
3UTR-3UTR GCA 90 bp TCCAACATATCAGAGTCTTCTTTTCAATGGTTGCCCCCAGAGACACACTCTCACCTCCATTTCCCCCTCTaGAGATTGGGAATAATTGTG +
Preference number: 2 (lower is better)
Translates to: SNISESSFQWLPPETHSHLHFPL*RLGIIV
Trigger: CACAATTATTCCCAATCTGCAGAGGGGGAAATGGAG...GTGAGAGTGTGTCTCTGGGGGCAACCATTGAAAAGAAGACTCTGATATGTTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
3UTR-3UTR GCA 90 bp AAACCTTCAGGGGCAGAGTTTAGGCCACAGATGACAAATATACAAGGCATGTGTCTTCTTTTCAATGGTTaGCCCCAGAGACACACTCTC +
Preference number: 2 (lower is better)
Translates to: KPSGAEFRPQMTNIQGMCLLFNG*PQRHTL
Trigger: GAGAGTGTGTCTCTGGGGGCAACCATTGAAAAGAAG...ACACATGCCTTGTATATTTGTCATCTGTGGCCTAAACTCTGCCCCTGAAGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
3UTR-3UTR CCA 90 bp ACAAACGTAATTGTAGGATCCTCTGTTACGACCAGCATAGGTTACTGGTTTGCTAAGCAGGGAGTCCACTaGAGAGAAGTTAAGGACCTG +
Preference number: 2 (lower is better)
Translates to: TNVIVGSSVTTSIGYWFAKQGVH*REVKDL
Trigger: CAGGTCCTTAACTTCTCTCCAGTGGACTCCCTGCTT...AGCAAACCAGTAACCTATGCTGGTCGTAACAGAGGATCCTACAATTACGTTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
3UTR-3UTR CCA 90 bp AGTACTTCGGGCAGCCTCTACCCATCAATCATGTTTAGTGTTTGGGATGAAAATCCCTCTCGCTTCTCATaGATTCACCTGGAGATATGG +
Preference number: 2 (lower is better)
Translates to: STSGSLYPSIMFSVWDENPSRFS*IHLEIW
Trigger: CCATATCTCCAGGTGAATCCATGAGAAGCGAGAGGG...ATTTTCATCCCAAACACTAAACATGATTGATGGGTAGAGGCTGCCCGAAGTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
3UTR-3UTR CCA 90 bp TTGTACTTGACACACTTCTTAACCGGTGGGCAGGGGATCTTGAACTTACTCATGAAGATAATTTGCAGCTaGCATGGGTTTGTGTTGGCC +
Preference number: 2 (lower is better)
Translates to: LYLTHFLTGGQGILNLLMKIICS*HGFVLA
Trigger: GGCCAACACAAACCCATGCCAGCTGCAAATTATCTT...CATGAGTAAGTTCAAGATCCCCTGCCCACCGGTTAAGAAGTGTGTCAAGTACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480005.1
3UTR-3UTR TCA 90 bp AAAACTTCCCCAAGTCAGTTGCTAGAGAGTAGGCAAAGCAGGGAGTCCACTGGAATAGTGCTTTGTCCTTaGAAATTGTACCTTGTCAAG +
Preference number: 2 (lower is better)
Translates to: KTSPSQLLESRQSRESTGIVLCP*KLYLVK
Trigger: CTTGACAAGGTACAATTTTCAAGGACAAAGCACTAT...TCCAGTGGACTCCCTGCTTTGCCTACTCTCTAGCAACTGACTTGGGGAAGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
3UTR-3UTR TCA 90 bp TTAAAAACAAACGTAATTGTAGGATCCTCTGTTACGACCAGCATAGGTTACTGGTGGTCCTGTAATCTCTaGAGGCCTCCATTTCCCCCT +
Preference number: 2 (lower is better)
Translates to: LKTNVIVGSSVTTSIGYWWSCNL*RPPFPP
Trigger: AGGGGGAAATGGAGGCCTTCAGAGATTACAGGACCA...CCAGTAACCTATGCTGGTCGTAACAGAGGATCCTACAATTACGTTTGTTTTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
3UTR-3UTR GCA 90 bp ACCACAGCATTCTTCTATCTCAGATTCCATCTTTACACAGTACTTCGGGCAGCCGGGGCAGTTTTATATTaGCTTCGAGGGACATTTCTT +
Preference number: 2 (lower is better)
Translates to: TTAFFYLRFHLYTVLRAAGAVLY*LRGTFL
Trigger: AAGAAATGTCCCTCGAAGGCAATATAAAACTGCCCC...GGCTGCCCGAAGTACTGTGTAAAGATGGAATCTGAGATAGAAGAATGCTGTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
3UTR-3UTR GCA 90 bp GCATTCTTCTATCTCAGATTCCATCTTTACACAGTACTTCGGGCAGCCTCTACCGGGGCAGTTTTATATTaGCTTCGAGGGACATTTCTT +
Preference number: 2 (lower is better)
Translates to: AFFYLRFHLYTVLRAASTGAVLY*LRGTFL
Trigger: AAGAAATGTCCCTCGAAGGCAATATAAAACTGCCCC...GGTAGAGGCTGCCCGAAGTACTGTGTAAAGATGGAATCTGAGATAGAAGAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
3UTR-3UTR GCA 90 bp CTCTGTTACGACCAGCATAGGTTACTGGTTTGCTCCCTAACTTTGTTCTGGACTCATAGGTTACTGGTTTaGTCCCTAACTTTGTTCTGG +
Preference number: 2 (lower is better)
Translates to: LCYDQHRLLVCSLTLFWTHRLLV*SLTLFW
Trigger: CCAGAACAAAGTTAGGGAGCAAACCAGTAACCTATG...AGTCCAGAACAAAGTTAGGGAGCAAACCAGTAACCTATGCTGGTCGTAACAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
3UTR-3UTR CCA 90 bp CATAGGTTACTGGTTTGCTCCCTAACTTTGTTCTGGACTCCAACATCTCTATTGGAGTCTTCTTTTCAATaGTTGCCCCCAGAGACACAC +
Preference number: 2 (lower is better)
Translates to: HRLLVCSLTLFWTPTSLLESSFQ*LPPETH
Trigger: GTGTGTCTCTGGGGGCAACCATTGAAAAGAAGACTC...CAATAGAGATGTTGGAGTCCAGAACAAAGTTAGGGAGCAAACCAGTAACCTATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
3UTR-3UTR TCA 90 bp CATAGGTTACTGGTTTGCTCCCTAACTTTGTTCTGGACTCCAACATCTCTATTGAGGGTAATCAATGAGTaGGGGAGGATAATGGGTTTG +
Preference number: 2 (lower is better)
Translates to: HRLLVCSLTLFWTPTSLLRVINE*GRIMGL
Trigger: CAAACCCATTATCCTCCCTCACTCATTGATTACCCT...CAATAGAGATGTTGGAGTCCAGAACAAAGTTAGGGAGCAAACCAGTAACCTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
3UTR-3UTR TCA 90 bp CTCTGTTACGACCAGCATAGGTTACTGGTTTGCTCCCTAACTTTGTTCTGGACTCTGAACTATTTTGTGTaGAGGAGTAGCTCTAACACA +
Preference number: 2 (lower is better)
Translates to: LCYDQHRLLVCSLTLFWTLNYFV*RSSSNT
Trigger: TGTGTTAGAGCTACTCCTTCACACAAAATAGTTCAG...AGTCCAGAACAAAGTTAGGGAGCAAACCAGTAACCTATGCTGGTCGTAACAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
3UTR-3UTR TCA 90 bp CTCTGTTACGACCAGCATAGGTTACTGGTTTGCTCCCTAACTTTGTTCTGGACTAGTTTAGGCCACAGATaGCAAATATACAAGGCATGT +
Preference number: 2 (lower is better)
Translates to: LCYDQHRLLVCSLTLFWTSLGHR*QIYKAC
Trigger: ACATGCCTTGTATATTTGTCATCTGTGGCCTAAACT...AGTCCAGAACAAAGTTAGGGAGCAAACCAGTAACCTATGCTGGTCGTAACAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
3UTR-3UTR TCA 90 bp ACCACAGCATTCTTCTATCTCAGATTCCATCTTTACACAGTACTTCGGGCAGCCAATCACTTTCAGATATaGGGATCTGGTGTTCAGAGT +
Preference number: 2 (lower is better)
Translates to: TTAFFYLRFHLYTVLRAANHFQI*GSGVQS
Trigger: ACTCTGAACACCAGATCCTCATATCTGAAAGTGATT...GGCTGCCCGAAGTACTGTGTAAAGATGGAATCTGAGATAGAAGAATGCTGTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
3UTR-3UTR CCA 90 bp GTTTGCTCCCTAACTTTGTTCTGGACTCCAACATCTCTATTGAATGAGACTTTTAAGCAGGGAGTCCACTaGAGAGAAGTTAAGGACCTG +
Preference number: 2 (lower is better)
Translates to: VCSLTLFWTPTSLLNETFKQGVH*REVKDL
Trigger: CAGGTCCTTAACTTCTCTCCAGTGGACTCCCTGCTT...AAAAGTCTCATTCAATAGAGATGTTGGAGTCCAGAACAAAGTTAGGGAGCAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
3UTR-3UTR CCA 90 bp TTCTGGACTCCAACATCTCTATTGAATGAGACTTTTGAACAGTCCTCTGGGATAGAGTCTTCTTTTCAATaGTTGCCCCCAGAGACACAC +
Preference number: 2 (lower is better)
Translates to: FWTPTSLLNETFEQSSGIESSFQ*LPPETH
Trigger: GTGTGTCTCTGGGGGCAACCATTGAAAAGAAGACTC...TATCCCAGAGGACTGTTCAAAAGTCTCATTCAATAGAGATGTTGGAGTCCAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
3UTR-3UTR CCA 90 bp TCCAACATATCAGAGTCTTCTTTTCAATGGTTGCCCCCAGAGACACACTCTCACTTGGCATCTATTAAGTaGATAGGGCCACCTAATAGA +
Preference number: 2 (lower is better)
Translates to: SNISESSFQWLPPETHSHLASIK*IGPPNR
Trigger: TCTATTAGGTGGCCCTATCCACTTAATAGATGCCAA...GTGAGAGTGTGTCTCTGGGGGCAACCATTGAAAAGAAGACTCTGATATGTTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
3UTR-3UTR CCA 90 bp ACCACAGCATTCTTCTATCTCAGATTCCATCTTTACACAGTACTTCGGGCAGCCTCTCATGGATTCACCTaGAGATATGGAAATAGGGAA +
Preference number: 2 (lower is better)
Translates to: TTAFFYLRFHLYTVLRAASHGFT*RYGNRE
Trigger: TTCCCTATTTCCATATCTCCAGGTGAATCCATGAGA...GGCTGCCCGAAGTACTGTGTAAAGATGGAATCTGAGATAGAAGAATGCTGTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
3UTR-3UTR CCA 90 bp GCATTCTTCTATCTCAGATTCCATCTTTACACAGTACTTCGGGCAGCCTCTACCTCTCATGGATTCACCTaGAGATATGGAAATAGGGAA +
Preference number: 2 (lower is better)
Translates to: AFFYLRFHLYTVLRAASTSHGFT*RYGNRE
Trigger: TTCCCTATTTCCATATCTCCAGGTGAATCCATGAGA...GGTAGAGGCTGCCCGAAGTACTGTGTAAAGATGGAATCTGAGATAGAAGAATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
3UTR CAA 90 bp ATCCTCTGTTACGACCAGCATAGGTTACTGGTTTGCTCCCTAACTTaGTTCTGGACTCCAACATCTCTATTGAATGAGACTTTTGAACAG +
Preference number: 2 (lower is better)
Translates to: ILCYDQHRLLVCSLT*FWTPTSLLNETFEQ
Trigger: CTGTTCAAAAGTCTCATTCAATAGAGATGTTGGAGTCCAGAACAAAGTTAGGGAGCAAACCAGTAACCTATGCTGGTCGTAACAGAGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
3UTR-3UTR TCA 90 bp GCATTCTTCTATCTCAGATTCCATCTTTACACAGTACTTCGGGCAGCCTCTACCATAGTGCTTTGTCCTTaGAAATTGTACCTTGTCAAG +
Preference number: 2 (lower is better)
Translates to: AFFYLRFHLYTVLRAASTIVLCP*KLYLVK
Trigger: CTTGACAAGGTACAATTTTCAAGGACAAAGCACTAT...GGTAGAGGCTGCCCGAAGTACTGTGTAAAGATGGAATCTGAGATAGAAGAATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
3UTR-3UTR TCA 90 bp AAACCTTCAGGGGCAGAGTTTAGGCCACAGATGACAAATATACAAGGCATGTGTCTGAACTATTTTGTGTaGAGGAGTAGCTCTAACACA +
Preference number: 2 (lower is better)
Translates to: KPSGAEFRPQMTNIQGMCLNYFV*RSSSNT
Trigger: TGTGTTAGAGCTACTCCTTCACACAAAATAGTTCAG...ACACATGCCTTGTATATTTGTCATCTGTGGCCTAAACTCTGCCCCTGAAGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
3UTR-3UTR GCA 90 bp TTAAAAACAAACGTAATTGTAGGATCCTCTGTTACGACCAGCATAGGTTACTGGGAGAAGTTAAGGACCTaGTGTCTGGTTCCACTACCT +
Preference number: 2 (lower is better)
Translates to: LKTNVIVGSSVTTSIGYWEKLRT*CLVPLP
Trigger: AGGTAGTGGAACCAGACAGCAGGTCCTTAACTTCTC...CCAGTAACCTATGCTGGTCGTAACAGAGGATCCTACAATTACGTTTGTTTTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
3UTR-3UTR GCA 90 bp AAACCTTCAGGGGCAGAGTTTAGGCCACAGATGACAAATATACAAGGCATGTGTCAGAGATTTTCCATATaGTCGATTCCCACACAGATT +
Preference number: 2 (lower is better)
Translates to: KPSGAEFRPQMTNIQGMCQRFSI*SIPTQI
Trigger: AATCTGTGTGGGAATCGAGCATATGGAAAATCTCTG...ACACATGCCTTGTATATTTGTCATCTGTGGCCTAAACTCTGCCCCTGAAGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450307.7
ENST00000460144.5
3UTR-3UTR CCA 90 bp GTTTGCTCCCTAACTTTGTTCTGGACTCCAACATCTCTATTGAATGAGACTTTTTCCTTGGGGAAGGGCTaGATACTCTTCAGTCATCTT +
Preference number: 2 (lower is better)
Translates to: VCSLTLFWTPTSLLNETFSLGKG*ILFSHL
Trigger: AAGATGACTGAAGAGTATCCAGCCCTTCCCCAAGGA...AAAAGTCTCATTCAATAGAGATGTTGGAGTCCAGAACAAAGTTAGGGAGCAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450307.7
ENST00000460144.5
3UTR-3UTR TCA 90 bp ACAAACGTAATTGTAGGATCCTCTGTTACGACCAGCATAGGTTACTGGTTTGCTTGTACCTTGTCAAGGTaGAGTAAATGCAGTAATGGA +
Preference number: 2 (lower is better)
Translates to: TNVIVGSSVTTSIGYWFACTLSR*SKCSNG
Trigger: TCCATTACTGCATTTACTTCACCTTGACAAGGTACA...AGCAAACCAGTAACCTATGCTGGTCGTAACAGAGGATCCTACAATTACGTTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
3UTR-3UTR TCA 90 bp TCACACATAGCAGTTGAGTCTGAGACCTGTAATGTGGCCAAACACTTCTTTGTATGTACCTTGTCAAGGTaGAGTAAATGCAGTAATGGA +
Preference number: 2 (lower is better)
Translates to: SHIAVESETCNVAKHFFVCTLSR*SKCSNG
Trigger: TCCATTACTGCATTTACTTCACCTTGACAAGGTACA...TACAAAGAAGTGTTTGGCCACATTACAGGTCTCAGACTCAACTGCTATGTGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
3UTR-3UTR TCA 90 bp ACAAACGTAATTGTAGGATCCTCTGTTACGACCAGCATAGGTTACTGGTTTGCTAATCACTTTCAGATATaGGGATCTGGTGTTCAGAGT +
Preference number: 2 (lower is better)
Translates to: TNVIVGSSVTTSIGYWFANHFQI*GSGVQS
Trigger: ACTCTGAACACCAGATCCTCATATCTGAAAGTGATT...AGCAAACCAGTAACCTATGCTGGTCGTAACAGAGGATCCTACAATTACGTTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
3UTR-3UTR TCA 90 bp AAACCTTCAGGGGCAGAGTTTAGGCCACAGATGACAAATATACAAGGCATGTGTCTCCAACATCTCTATTaGATGAGACTTTTGAACAGT +
Preference number: 2 (lower is better)
Translates to: KPSGAEFRPQMTNIQGMCLQHLY*MRLLNS
Trigger: ACTGTTCAAAAGTCTCATTCAATAGAGATGTTGGAG...ACACATGCCTTGTATATTTGTCATCTGTGGCCTAAACTCTGCCCCTGAAGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
3UTR-3UTR TCA 90 bp CATAGGTTACTGGTTTGCTCCCTAACTTTGTTCTGGACTCCAACATCTCTATTGTCCTTCTCTATGTTCTaGACTATTTTGTGTGAAGGA +
Preference number: 2 (lower is better)
Translates to: HRLLVCSLTLFWTPTSLLSFSMF*TILCEG
Trigger: TCCTTCACACAAAATAGTTCAGAACATAGAGAAGGA...CAATAGAGATGTTGGAGTCCAGAACAAAGTTAGGGAGCAAACCAGTAACCTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
3UTR-3UTR TCA 90 bp TCACACATAGCAGTTGAGTCTGAGACCTGTAATGTGGCCAAACACTTCTTTGTAGCAAGAATTACTAATTaGCCACAGCATTCTTCTATC +
Preference number: 2 (lower is better)
Translates to: SHIAVESETCNVAKHFFVARITN*PQHSSI
Trigger: GATAGAAGAATGCTGTGGTCAATTAGTAATTCTTGC...TACAAAGAAGTGTTTGGCCACATTACAGGTCTCAGACTCAACTGCTATGTGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
3UTR-3UTR TCA 90 bp CATAGGTTACTGGTTTGCTCCCTAACTTTGTTCTGGACTCCAACATCTCTATTGGCAAGAATTACTAATTaGCCACAGCATTCTTCTATC +
Preference number: 2 (lower is better)
Translates to: HRLLVCSLTLFWTPTSLLARITN*PQHSSI
Trigger: GATAGAAGAATGCTGTGGTCAATTAGTAATTCTTGC...CAATAGAGATGTTGGAGTCCAGAACAAAGTTAGGGAGCAAACCAGTAACCTATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
3UTR-3UTR TCA 90 bp TCACACATAGCAGTTGAGTCTGAGACCTGTAATGTGGCCAAACACTTCTTTGTAATTCCCACACAGATTTaGTGTTTTGGGTTCAGAAAT +
Preference number: 2 (lower is better)
Translates to: SHIAVESETCNVAKHFFVIPTQI*CFGFRN
Trigger: ATTTCTGAACCCAAAACATCAAATCTGTGTGGGAAT...TACAAAGAAGTGTTTGGCCACATTACAGGTCTCAGACTCAACTGCTATGTGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450307.7
ENST00000460144.5
3UTR-3UTR GCA 90 bp AGCAAGGGATTATTGATTCCACTAGACTATGCCACTTCAGAAAACATTAGCAGTGGGGCAGTTTTATATTaGCTTCGAGGGACATTTCTT +
Preference number: 2 (lower is better)
Translates to: SKGLLIPLDYATSENISSGAVLY*LRGTFL
Trigger: AAGAAATGTCCCTCGAAGGCAATATAAAACTGCCCC...ACTGCTAATGTTTTCTGAAGTGGCATAGTCTAGTGGAATCAATAATCCCTTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
ENST00000522977.5
3UTR-3UTR GCA 90 bp CATAGGTTACTGGTTTGCTCCCTAACTTTGTTCTGGACTCCAACATCTCTATTGCATTGTGTTTACAAGTaGCTCAAAGTCCATTTACAC +
Preference number: 2 (lower is better)
Translates to: HRLLVCSLTLFWTPTSLLHCVYK*LKVHLH
Trigger: GTGTAAATGGACTTTGAGGCACTTGTAAACACAATG...CAATAGAGATGTTGGAGTCCAGAACAAAGTTAGGGAGCAAACCAGTAACCTATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
3UTR-3UTR GCA 90 bp AAATCACTTTCAGATATGAGGATCTGGTGTTCAGAGTCTAAAACAATGGTTGAACTTCTTTTCAATGGTTaGCCCCAGAGACACACTCTC +
Preference number: 2 (lower is better)
Translates to: KSLSDMRIWCSESKTMVELLFNG*PQRHTL
Trigger: GAGAGTGTGTCTCTGGGGGCAACCATTGAAAAGAAG...TTCAACCATTGTTTTAGACTCTGAACACCAGATCCTCATATCTGAAAGTGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
3UTR-3UTR TCA 90 bp TTAAAAACAAACGTAATTGTAGGATCCTCTGTTACGACCAGCATAGGTTACTGGCTGAACTATTTTGTGTaGAGGAGTAGCTCTAACACA +
Preference number: 2 (lower is better)
Translates to: LKTNVIVGSSVTTSIGYWLNYFV*RSSSNT
Trigger: TGTGTTAGAGCTACTCCTTCACACAAAATAGTTCAG...CCAGTAACCTATGCTGGTCGTAACAGAGGATCCTACAATTACGTTTGTTTTTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
3UTR-3UTR TCA 90 bp TTCTGGACTCCAACATCTCTATTGAATGAGACTTTTGAACAGTCCTCTGGGATAATTCCCACACAGATTTaGTGTTTTGGGTTCAGAAAT +
Preference number: 2 (lower is better)
Translates to: FWTPTSLLNETFEQSSGIIPTQI*CFGFRN
Trigger: ATTTCTGAACCCAAAACATCAAATCTGTGTGGGAAT...TATCCCAGAGGACTGTTCAAAAGTCTCATTCAATAGAGATGTTGGAGTCCAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450307.7
ENST00000460144.5
3UTR-3UTR GCA 90 bp GTTTGCTCCCTAACTTTGTTCTGGACTCCAACATCTCTATTGAATGAGACTTTTCAGAGATTTTCCATATaGTCGATTCCCACACAGATT +
Preference number: 2 (lower is better)
Translates to: VCSLTLFWTPTSLLNETFQRFSI*SIPTQI
Trigger: AATCTGTGTGGGAATCGAGCATATGGAAAATCTCTG...AAAAGTCTCATTCAATAGAGATGTTGGAGTCCAGAACAAAGTTAGGGAGCAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450307.7
ENST00000460144.5
3UTR-3UTR CCA 90 bp TTCTGGACTCCAACATCTCTATTGAATGAGACTTTTGAACAGTCCTCTGGGATATCAGATATGAGGATCTaGTGTTCAGAGTCTAAAACA +
Preference number: 2 (lower is better)
Translates to: FWTPTSLLNETFEQSSGISDMRI*CSESKT
Trigger: TGTTTTAGACTCTGAACACCAGATCCTCATATCTGA...TATCCCAGAGGACTGTTCAAAAGTCTCATTCAATAGAGATGTTGGAGTCCAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
3UTR-3UTR TCA 90 bp GTTTGCTCCCTAACTTTGTTCTGGACTCCAACATCTCTATTGAATGAGACTTTTTCCTTCTCTATGTTCTaGACTATTTTGTGTGAAGGA +
Preference number: 2 (lower is better)
Translates to: VCSLTLFWTPTSLLNETFSFSMF*TILCEG
Trigger: TCCTTCACACAAAATAGTTCAGAACATAGAGAAGGA...AAAAGTCTCATTCAATAGAGATGTTGGAGTCCAGAACAAAGTTAGGGAGCAAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
3UTR-3UTR TCA 90 bp TTAAAAACAAACGTAATTGTAGGATCCTCTGTTACGACCAGCATAGGTTACTGGCTCCAACATCTCTATTaGATGAGACTTTTGAACAGT +
Preference number: 2 (lower is better)
Translates to: LKTNVIVGSSVTTSIGYWLQHLY*MRLLNS
Trigger: ACTGTTCAAAAGTCTCATTCAATAGAGATGTTGGAG...CCAGTAACCTATGCTGGTCGTAACAGAGGATCCTACAATTACGTTTGTTTTTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
3UTR GCA 72 bp CTGTGGGCGGCCGCGCGGTCTGGAGCCGCCCAAACCTaGGGCGGTCGCCAGGGTCCCTGCGGTCTCCGCGGT +
Preference number: 3 (lower is better)
Translates to: LWAAARSGAAQT*GGRQGPCGLRG
Trigger: ACCGCGGAGACCGCAGGGACCCTGGCGACCGCCGCAGGTTTGGGCGGCTCCAGACCGCGCGGCCGCCCACAG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450307.7
ENST00000460144.5
3UTR CCA 72 bp GCTTTGGCCGGGTGGGCTGTGGGCGGCCGCGCGGTCTaGAGCCGCCCAAACCTGCGGCGGTCGCCAGGGTCC +
Preference number: 3 (lower is better)
Translates to: ALAGWAVGGRAV*SRPNLRRSPGS
Trigger: GGACCCTGGCGACCGCCGCAGGTTTGGGCGGCTCCAGACCGCGCGGCCGCCCACAGCCCACCCGGCCAAAGC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450307.7
ENST00000460144.5
3UTR CCA 72 bp CTGCGGCGGTCGCCAGGGTCCCTGCGGTCTCCGCGGTaGGGCAGCAGCTCCAGGGGCTGGTGCGTGTACAGG +
Preference number: 3 (lower is better)
Translates to: LRRSPGSLRSPR*GSSSRGWCVYR
Trigger: CCTGTACACGCACCAGCCCCTGGAGCTGCTGCCCCACCGCGGAGACCGCAGGGACCCTGGCGACCGCCGCAG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450307.7
ENST00000460144.5
3UTR CCA 72 bp CTGCGGTCTCCGCGGTGGGGCAGCAGCTCCAGGGGCTaGTGCGTGTACAGGTCCGACTCGATCACCACCTGC +
Preference number: 3 (lower is better)
Translates to: LRSPRWGSSSRG*CVYRSDSITTC
Trigger: GCAGGTGGTGATCGAGTCGGACCTGTACACGCACCAGCCCCTGGAGCTGCTGCCCCACCGCGGAGACCGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460144.5
3UTR GCA 72 bp GGCTGGTGCGTGTACAGGTCCGACTCGATCACCACCTaGCGGGCGGGGGAAACGCGGTTAGCCCACTCCTCT +
Preference number: 3 (lower is better)
Translates to: GWCVYRSDSITT*RAGETRLAHSS
Trigger: AGAGGAGTGGGCTAACCGCGTTTCCCCCGCCCGGCAGGTGGTGATCGAGTCGGACCTGTACACGCACCAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460144.5
3UTR-3UTR CAA 90 bp CTTGTCCACATTTTCCGGAGGATGCCGGGGACGCCGCAGGAAGCACTGCCTGTCCTTGTCCGGGGAACCTaGGCCAACACAGGGCACTTG +
Preference number: 3 (lower is better)
Translates to: LVHIFRRMPGTPQEALPVLVRGT*ANTGHL
Trigger: CAAGTGCCCTGTGTTGGCCAAGGTTCCCCGGACAAG...GACAGGCAGTGCTTCCTGCGGCGTCCCCGGCATCCTCCGGAAAATGTGGACAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000450307.7
ENST00000460144.5
ENST00000522977.5
3UTR GCA 72 bp GTCTGGATCCTCTCATCAGAACAGCTCCCTTCTCTGTaGCCATGGCTGTCGCCTCCAATGAGGCAGAGGCTG +
Preference number: 3 (lower is better)
Translates to: VWILSSEQLPSL*PWLSPPMRQRL
Trigger: CAGCCTCTGCCTCATTGGAGGCGACAGCCATGGGCACAGAGAAGGGAGCTGTTCTGATGAGAGGATCCAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450307.7
ENST00000460144.5
3UTR-3UTR CAA 90 bp CTTGTCCACATTTTCCGGAGGATGCCGGGGACGCCGCAGGAAGCACTGCCTGTCAGGGGCAGTTTTATATaGCCTTCGAGGGACATTTCT +
Preference number: 3 (lower is better)
Translates to: LVHIFRRMPGTPQEALPVRGSFI*PSRDIS
Trigger: AGAAATGTCCCTCGAAGGCAATATAAAACTGCCCCT...GACAGGCAGTGCTTCCTGCGGCGTCCCCGGCATCCTCCGGAAAATGTGGACAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000450307.7
ENST00000460144.5
ENST00000522977.5
3UTR-3UTR CAA 90 bp TGCGTGTGGCTCAGTTTCAATCCTGAAGGTTTTTCCTCTTGTCCGGGGAACCTTCTTGTCCGGGGAACCTaGGCCAACACAGGGCACTTG +
Preference number: 3 (lower is better)
Translates to: CVWLSFNPEGFSSCPGNLLVRGT*ANTGHL
Trigger: CAAGTGCCCTGTGTTGGCCAAGGTTCCCCGGACAAG...AAGGTTCCCCGGACAAGAGGAAAAACCTTCAGGATTGAAACTGAGCCACACGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
ENST00000522977.5
3UTR-3UTR CAA 90 bp ACAAACGTAATTGTAGGATCCTCTGTTACGACCAGCATAGGTTACTGGTTTGCTGGTCTGGCAGAGGCTTaGGCCGGGTGGGCTGTGGGC +
Preference number: 3 (lower is better)
Translates to: TNVIVGSSVTTSIGYWFAGLAEA*AGWAVG
Trigger: GCCCACAGCCCACCCGGCCAAAGCCTCTGCCAGACC...AGCAAACCAGTAACCTATGCTGGTCGTAACAGAGGATCCTACAATTACGTTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450307.7
ENST00000460144.5
3UTR-3UTR CAA 90 bp CCAGGCCTCTCAGCCACCCTCTCGCTTCTCATGGATTCACCTGGAGATATGGAAACTTCCCCAAGTCAGTaGCTAGAGAGTAGGCAAAGC +
Preference number: 3 (lower is better)
Translates to: PGLSATLSLLMDSPGDMETSPSQ*LESRQS
Trigger: GCTTTGCCTACTCTCTAGCAACTGACTTGGGGAAGT...TTCCATATCTCCAGGTGAATCCATGAGAAGCGAGAGGGTGGCTGAGAGGCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
3UTR-3UTR CAA 90 bp CTTGTCCACATTTTCCGGAGGATGCCGGGGACGCCGCAGGAAGCACTGCCTGTCGATTCCCACACAGATTaGATGTTTTGGGTTCAGAAA +
Preference number: 3 (lower is better)
Translates to: LVHIFRRMPGTPQEALPVDSHTD*MFWVQK
Trigger: TTTCTGAACCCAAAACATCAAATCTGTGTGGGAATC...GACAGGCAGTGCTTCCTGCGGCGTCCCCGGCATCCTCCGGAAAATGTGGACAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000450307.7
ENST00000460144.5
3UTR GCA 72 bp CAAAGCAGGGAGTCCACTGGAGAGAAGTTAAGGACCTaGTGTCTGGTTCCACTACCTGGTATCTGGTCCTGT +
Preference number: 3 (lower is better)
Translates to: QSRESTGEKLRT*CLVPLPGIWSC
Trigger: ACAGGACCAGATACCAGGTAGTGGAACCAGACAGCAGGTCCTTAACTTCTCTCCAGTGGACTCCCTGCTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
3UTR-3UTR CAA 90 bp TCCAACATATCAGAGTCTTCTTTTCAATGGTTGCCCCCAGAGACACACTCTCACCTTGTCCGGGGAACCTaGGCCAACACAGGGCACTTG +
Preference number: 3 (lower is better)
Translates to: SNISESSFQWLPPETHSHLVRGT*ANTGHL
Trigger: CAAGTGCCCTGTGTTGGCCAAGGTTCCCCGGACAAG...GTGAGAGTGTGTCTCTGGGGGCAACCATTGAAAAGAAGACTCTGATATGTTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
3UTR-3UTR CAA 90 bp CCAGGCCTCTCAGCCACCCTCTCGCTTCTCATGGATTCACCTGGAGATATGGAAGCTCTAACACAGGCATaGAAGCCTGACACTCACATA +
Preference number: 3 (lower is better)
Translates to: PGLSATLSLLMDSPGDMEALTQA*KPDTHI
Trigger: TATGTGAGTGTCAGGCTTCAATGCCTGTGTTAGAGC...TTCCATATCTCCAGGTGAATCCATGAGAAGCGAGAGGGTGGCTGAGAGGCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
3UTR-3UTR CAA 90 bp CAATGGTTGAAGAGCAGAGATAGCAAGGTGGAATCCCAGAGGCCCAGGCCTCTCAGGGGCAGTTTTATATaGCCTTCGAGGGACATTTCT +
Preference number: 3 (lower is better)
Translates to: QWLKSRDSKVESQRPRPLRGSFI*PSRDIS
Trigger: AGAAATGTCCCTCGAAGGCAATATAAAACTGCCCCT...GAGAGGCCTGGGCCTCTGGGATTCCACCTTGCTATCTCTGCTCTTCAACCATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
3UTR-3UTR CAA 90 bp CCATTGTGTTTACAAGTGCCTCAAAGTCCATTTACACTAGAAAATCACACACTTGGTCTGGCAGAGGCTTaGGCCGGGTGGGCTGTGGGC +
Preference number: 3 (lower is better)
Translates to: PLCLQVPQSPFTLENHTLGLAEA*AGWAVG
Trigger: GCCCACAGCCCACCCGGCCAAAGCCTCTGCCAGACC...AAGTGTGTGATTTTCTAGTGTAAATGGACTTTGAGGCACTTGTAAACACAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450307.7
ENST00000460144.5
3UTR-3UTR CAA 90 bp CCAGGCCTCTCAGCCACCCTCTCGCTTCTCATGGATTCACCTGGAGATATGGAACACAGATTTGATGTTTaGGGTTCAGAAATCCCCACG +
Preference number: 3 (lower is better)
Translates to: PGLSATLSLLMDSPGDMEHRFDV*GSEIPT
Trigger: CGTGGGGATTTCTGAACCCAAAACATCAAATCTGTG...TTCCATATCTCCAGGTGAATCCATGAGAAGCGAGAGGGTGGCTGAGAGGCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450307.7
ENST00000460144.5
3UTR-3UTR CAA 90 bp CACCCTCTCGCTTCTCATGGATTCACCTGGAGATATGGAAATAGGGAACTCAGCGCCAACACAGGGCACTaGAAGAGGGTCACCTTTAGT +
Preference number: 3 (lower is better)
Translates to: HPLASHGFTWRYGNRELSANTGH*KRVTFS
Trigger: ACTAAAGGTGACCCTCTTCAAGTGCCCTGTGTTGGC...GCTGAGTTCCCTATTTCCATATCTCCAGGTGAATCCATGAGAAGCGAGAGGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450307.7
ENST00000460144.5
3UTR-3UTR CAA 90 bp GATCTTGAACTTACTCATGAGATATTTCTGACGCCTGCATGCCTATGGGAGGTTGCAGCTGGCATGGGTTaGTGTTGGCCTCTCGAGGGT +
Preference number: 3 (lower is better)
Translates to: DLELTHEIFLTPACLWEVAAGMG*CWPLEG
Trigger: ACCCTCGAGAGGCCAACACAAACCCATGCCAGCTGC...AACCTCCCATAGGCATGCAGGCGTCAGAAATATCTCATGAGTAAGTTCAAGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480005.1
3UTR-3UTR CAA 90 bp CCAGGCCTCTCAGCCACCCTCTCGCTTCTCATGGATTCACCTGGAGATATGGAACAAAGCAAGGGATTATaGATTCCACTAGACTATGCC +
Preference number: 3 (lower is better)
Translates to: PGLSATLSLLMDSPGDMEQSKGL*IPLDYA
Trigger: GGCATAGTCTAGTGGAATCAATAATCCCTTGCTTTG...TTCCATATCTCCAGGTGAATCCATGAGAAGCGAGAGGGTGGCTGAGAGGCCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
3UTR-3UTR CAA 90 bp CCAGGCCTCTCAGCCACCCTCTCGCTTCTCATGGATTCACCTGGAGATATGGAAGCAGCTTCTCAGGATTaGCTGATAGTATACAGTAGT +
Preference number: 3 (lower is better)
Translates to: PGLSATLSLLMDSPGDMEAASQD*LIVYSS
Trigger: ACTACTGTATACTATCAGCAAATCCTGAGAAGCTGC...TTCCATATCTCCAGGTGAATCCATGAGAAGCGAGAGGGTGGCTGAGAGGCCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450307.7
3UTR GCA 72 bp GGTCCTGTAATCTCTGAAGGCCTCCATTTCCCCCTCTaGAGATTGGGAATAATTGTGCTTTCTTCCACAGGG +
Preference number: 3 (lower is better)
Translates to: GPVISEGLHFPL*RLGIIVLSSTG
Trigger: CCCTGTGGAAGAAAGCACAATTATTCCCAATCTGCAGAGGGGGAAATGGAGGCCTTCAGAGATTACAGGACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
3UTR TCA 72 bp TTCTTTCCTGTGCCCTATCCCAGGGTAATCAATGAGTaGGGGAGGATAATGGGTTTGGACCAGCTACTAGCA +
Preference number: 3 (lower is better)
Translates to: FFPVPYPRVINE*GRIMGLDQLLA
Trigger: TGCTAGTAGCTGGTCCAAACCCATTATCCTCCCTCACTCATTGATTACCCTGGGATAGGGCACAGGAAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
ENST00000522977.5
3UTR CCA 72 bp TTCCATATGCTCGATTCCCACACAGATTTGATGTTTTaGGTTCAGAAATCCCCACGGGTCTGGCAGAGGCTT +
Preference number: 3 (lower is better)
Translates to: FHMLDSHTDLMF*VQKSPRVWQRL
Trigger: AAGCCTCTGCCAGACCCGTGGGGATTTCTGAACCCAAAACATCAAATCTGTGTGGGAATCGAGCATATGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450307.7
ENST00000460144.5
3UTR-3UTR CAA 90 bp CTTAAAAACAAACGTAATTGTAGGATCCTCTGTTACGACCAGCATAGGTTACTGCTTGTCCGGGGAACCTaGGCCAACACAGGGCACTTG +
Preference number: 3 (lower is better)
Translates to: LKNKRNCRILCYDQHRLLLVRGT*ANTGHL
Trigger: CAAGTGCCCTGTGTTGGCCAAGGTTCCCCGGACAAG...CAGTAACCTATGCTGGTCGTAACAGAGGATCCTACAATTACGTTTGTTTTTAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
3UTR-3UTR CAA 90 bp ACAAACGTAATTGTAGGATCCTCTGTTACGACCAGCATAGGTTACTGGTTTGCTGGGAGGATAATGGGTTaGGACCAGCTACTAGCAGAG +
Preference number: 3 (lower is better)
Translates to: TNVIVGSSVTTSIGYWFAGRIMG*DQLLAE
Trigger: CTCTGCTAGTAGCTGGTCCAAACCCATTATCCTCCC...AGCAAACCAGTAACCTATGCTGGTCGTAACAGAGGATCCTACAATTACGTTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
3UTR-3UTR CAA 90 bp AAACCTTCAGGGGCAGAGTTTAGGCCACAGATGACAAATATACAAGGCATGTGTACTTCCCCAAGTCAGTaGCTAGAGAGTAGGCAAAGC +
Preference number: 3 (lower is better)
Translates to: KPSGAEFRPQMTNIQGMCTSPSQ*LESRQS
Trigger: GCTTTGCCTACTCTCTAGCAACTGACTTGGGGAAGT...ACACATGCCTTGTATATTTGTCATCTGTGGCCTAAACTCTGCCCCTGAAGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
3UTR-3UTR CAA 90 bp TCACACATAGCAGTTGAGTCTGAGACCTGTAATGTGGCCAAACACTTCTTTGTAGCCAACACAGGGCACTaGAAGAGGGTCACCTTTAGT +
Preference number: 3 (lower is better)
Translates to: SHIAVESETCNVAKHFFVANTGH*KRVTFS
Trigger: ACTAAAGGTGACCCTCTTCAAGTGCCCTGTGTTGGC...TACAAAGAAGTGTTTGGCCACATTACAGGTCTCAGACTCAACTGCTATGTGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450307.7
ENST00000460144.5
3UTR TCA 72 bp ACATTTCTTTCCTGTGCCCTATCCCAGGGTAATCAATaGGTGAGGGAGGATAATGGGTTTGGACCAGCTACT +
Preference number: 3 (lower is better)
Translates to: TFLSCALSQGNQ*VREDNGFGPAT
Trigger: AGTAGCTGGTCCAAACCCATTATCCTCCCTCACTCATTGATTACCCTGGGATAGGGCACAGGAAAGAAATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
ENST00000522977.5
3UTR-3UTR CAA 90 bp CTCTGTTACGACCAGCATAGGTTACTGGTTTGCTCCCTAACTTTGTTCTGGACTAGGGGCAGTTTTATATaGCCTTCGAGGGACATTTCT +
Preference number: 3 (lower is better)
Translates to: LCYDQHRLLVCSLTLFWTRGSFI*PSRDIS
Trigger: AGAAATGTCCCTCGAAGGCAATATAAAACTGCCCCT...AGTCCAGAACAAAGTTAGGGAGCAAACCAGTAACCTATGCTGGTCGTAACAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
3UTR GCA 72 bp AGGATCCTCTGTTACGACCAGCATAGGTTACTGGTTTaGTCCCTAACTTTGTTCTGGACTCCAACATCTCTA +
Preference number: 3 (lower is better)
Translates to: RILCYDQHRLLV*SLTLFWTPTSL
Trigger: TAGAGATGTTGGAGTCCAGAACAAAGTTAGGGAGCAAACCAGTAACCTATGCTGGTCGTAACAGAGGATCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
3UTR CCA 72 bp TTATTGGCCTCATTAAAAGATAATTTGCAGCTGGCATaGGTTTGTGTTGGCCTCTCGAGGGTCTGTCAACCA +
Preference number: 3 (lower is better)
Translates to: LLASLKDNLQLA*VCVGLSRVCQP
Trigger: TGGTTGACAGACCCTCGAGAGGCCAACACAAACCCATGCCAGCTGCAAATTATCTTTTAATGAGGCCAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480005.1
3UTR-3UTR CAA 90 bp TTCTGGACTCCAACATCTCTATTGAATGAGACTTTTGAACAGTCCTCTGGGATAACTTCCCCAAGTCAGTaGCTAGAGAGTAGGCAAAGC +
Preference number: 3 (lower is better)
Translates to: FWTPTSLLNETFEQSSGITSPSQ*LESRQS
Trigger: GCTTTGCCTACTCTCTAGCAACTGACTTGGGGAAGT...TATCCCAGAGGACTGTTCAAAAGTCTCATTCAATAGAGATGTTGGAGTCCAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
3UTR-3UTR CAA 90 bp TCACACATAGCAGTTGAGTCTGAGACCTGTAATGTGGCCAAACACTTCTTTGTATCTTCTTTTCAATGGTaGCCCCCAGAGACACACTCT +
Preference number: 3 (lower is better)
Translates to: SHIAVESETCNVAKHFFVSSFQW*PPETHS
Trigger: AGAGTGTGTCTCTGGGGGCAACCATTGAAAAGAAGA...TACAAAGAAGTGTTTGGCCACATTACAGGTCTCAGACTCAACTGCTATGTGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
3UTR-3UTR CAA 90 bp CATAGGTTACTGGTTTGCTCCCTAACTTTGTTCTGGACTCCAACATCTCTATTGTCTTCTTTTCAATGGTaGCCCCCAGAGACACACTCT +
Preference number: 3 (lower is better)
Translates to: HRLLVCSLTLFWTPTSLLSSFQW*PPETHS
Trigger: AGAGTGTGTCTCTGGGGGCAACCATTGAAAAGAAGA...CAATAGAGATGTTGGAGTCCAGAACAAAGTTAGGGAGCAAACCAGTAACCTATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
3UTR-3UTR CAA 90 bp AAAACTTCCCCAAGTCAGTTGCTAGAGAGTAGGCAAAGCAGGGAGTCCACTGGAATTCAAATCCCTTACTaGTTCCAACATATCAGAGTC +
Preference number: 3 (lower is better)
Translates to: KTSPSQLLESRQSRESTGIQIPY*FQHIRV
Trigger: GACTCTGATATGTTGGAACAAGTAAGGGATTTGAAT...TCCAGTGGACTCCCTGCTTTGCCTACTCTCTAGCAACTGACTTGGGGAAGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
3UTR-3UTR CAA 90 bp ACCACAGCATTCTTCTATCTCAGATTCCATCTTTACACAGTACTTCGGGCAGCCTTCTTAAAAGAGCACTaGATGCCCAGGTCTCCAAAT +
Preference number: 3 (lower is better)
Translates to: TTAFFYLRFHLYTVLRAAFLKEH*MPRSPN
Trigger: ATTTGGAGACCTGGGCATCAAGTGCTCTTTTAAGAA...GGCTGCCCGAAGTACTGTGTAAAGATGGAATCTGAGATAGAAGAATGCTGTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
3UTR-3UTR CAA 90 bp CTCTGTTACGACCAGCATAGGTTACTGGTTTGCTCCCTAACTTTGTTCTGGACTTTCTTAAAAGAGCACTaGATGCCCAGGTCTCCAAAT +
Preference number: 3 (lower is better)
Translates to: LCYDQHRLLVCSLTLFWTFLKEH*MPRSPN
Trigger: ATTTGGAGACCTGGGCATCAAGTGCTCTTTTAAGAA...AGTCCAGAACAAAGTTAGGGAGCAAACCAGTAACCTATGCTGGTCGTAACAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
3UTR GCA 72 bp CTTGAACTTACTCATGAGATATTTCTGACGCCTGCATaGCTATGGGAGGTTCTGAATATGGCTCGTGATTAC +
Preference number: 3 (lower is better)
Translates to: LELTHEIFLTPA*LWEVLNMARDY
Trigger: GTAATCACGAGCCATATTCAGAACCTCCCATAGGCATGCAGGCGTCAGAAATATCTCATGAGTAAGTTCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480005.1
3UTR-3UTR CAA 90 bp CATAGGTTACTGGTTTGCTCCCTAACTTTGTTCTGGACTCCAACATCTCTATTGAGGGGCAGTTTTATATaGCCTTCGAGGGACATTTCT +
Preference number: 3 (lower is better)
Translates to: HRLLVCSLTLFWTPTSLLRGSFI*PSRDIS
Trigger: AGAAATGTCCCTCGAAGGCAATATAAAACTGCCCCT...CAATAGAGATGTTGGAGTCCAGAACAAAGTTAGGGAGCAAACCAGTAACCTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
3UTR-3UTR CAA 90 bp TCCAACATATCAGAGTCTTCTTTTCAATGGTTGCCCCCAGAGACACACTCTCACGATTCCCACACAGATTaGATGTTTTGGGTTCAGAAA +
Preference number: 3 (lower is better)
Translates to: SNISESSFQWLPPETHSHDSHTD*MFWVQK
Trigger: TTTCTGAACCCAAAACATCAAATCTGTGTGGGAATC...GTGAGAGTGTGTCTCTGGGGGCAACCATTGAAAAGAAGACTCTGATATGTTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000450307.7
ENST00000460144.5
3UTR CCA 72 bp CTTACTCATGAGATATTTCTGACGCCTGCATGCCTATaGGAGGTTCTGAATATGGCTCGTGATTACATTCAT +
Preference number: 3 (lower is better)
Translates to: LTHEIFLTPACL*EVLNMARDYIH
Trigger: ATGAATGTAATCACGAGCCATATTCAGAACCTCCCATAGGCATGCAGGCGTCAGAAATATCTCATGAGTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480005.1
3UTR-3UTR CAA 90 bp TCACACATAGCAGTTGAGTCTGAGACCTGTAATGTGGCCAAACACTTCTTTGTACAAAGCAAGGGATTATaGATTCCACTAGACTATGCC +
Preference number: 3 (lower is better)
Translates to: SHIAVESETCNVAKHFFVQSKGL*IPLDYA
Trigger: GGCATAGTCTAGTGGAATCAATAATCCCTTGCTTTG...TACAAAGAAGTGTTTGGCCACATTACAGGTCTCAGACTCAACTGCTATGTGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
3UTR-3UTR CAA 90 bp CATAGGTTACTGGTTTGCTCCCTAACTTTGTTCTGGACTCCAACATCTCTATTGTTCTTAAAAGAGCACTaGATGCCCAGGTCTCCAAAT +
Preference number: 3 (lower is better)
Translates to: HRLLVCSLTLFWTPTSLLFLKEH*MPRSPN
Trigger: ATTTGGAGACCTGGGCATCAAGTGCTCTTTTAAGAA...CAATAGAGATGTTGGAGTCCAGAACAAAGTTAGGGAGCAAACCAGTAACCTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
3UTR CCA 72 bp TCGGGCAGCCTCTACCCATCAATCATGTTTAGTGTTTaGGATGAAAATCATTTATTAACCTTGGTCCTTCTC +
Preference number: 3 (lower is better)
Translates to: SGSLYPSIMFSV*DENHLLTLVLL
Trigger: GAGAAGGACCAAGGTTAATAAATGATTTTCATCCCAAACACTAAACATGATTGATGGGTAGAGGCTGCCCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
3UTR-3UTR CAA 90 bp TTAAAAACAAACGTAATTGTAGGATCCTCTGTTACGACCAGCATAGGTTACTGGCACAGATTTGATGTTTaGGGTTCAGAAATCCCCACG +
Preference number: 3 (lower is better)
Translates to: LKTNVIVGSSVTTSIGYWHRFDV*GSEIPT
Trigger: CGTGGGGATTTCTGAACCCAAAACATCAAATCTGTG...CCAGTAACCTATGCTGGTCGTAACAGAGGATCCTACAATTACGTTTGTTTTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450307.7
ENST00000460144.5
3UTR TCA 72 bp GTGTCACTAATCCCTCCATGGGCAAGAATTACTAATTaGCCACAGCATTCTTCTATCTCAGATTCCATCTTT +
Preference number: 3 (lower is better)
Translates to: VSLIPPWARITN*PQHSSISDSIF
Trigger: AAAGATGGAATCTGAGATAGAAGAATGCTGTGGTCAATTAGTAATTCTTGCCCATGGAGGGATTAGTGACAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
3UTR-3UTR CAA 90 bp CTTAAAAACAAACGTAATTGTAGGATCCTCTGTTACGACCAGCATAGGTTACTGAGTCTAAAACAATGGTaGAAGAGCAGAGATAGCAAG +
Preference number: 3 (lower is better)
Translates to: LKNKRNCRILCYDQHRLLSLKQW*KSRDSK
Trigger: CTTGCTATCTCTGCTCTTCAACCATTGTTTTAGACT...CAGTAACCTATGCTGGTCGTAACAGAGGATCCTACAATTACGTTTGTTTTTAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR GCA 90 bp AGGCTTTGGCCGGGTGGGCTGTGGGCGGCCGCGCGGTCTGGAGCCGCCCAAACCGGAGCCGCCCAAACCTaGGGCGGTCGCCAGGGTCCC +
Preference number: 4 (lower is better)
Translates to: RLWPGGLWAAARSGAAQTGAAQT*GGRQGP
Trigger: GGGACCCTGGCGACCGCCGCAGGTTTGGGCGGCTCC...GGTTTGGGCGGCTCCAGACCGCGCGGCCGCCCACAGCCCACCCGGCCAAAGCCT
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450307.7
ENST00000460144.5
CDS-3UTR GCA 90 bp AGGCTTTGGCCGGGTGGGCTGTGGGCGGCCGCGCGGTCTGGAGCCGCCCAAACCACATTTTCCGGAGGATaGCGGGGACGCCGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: RLWPGGLWAAARSGAAQTTFSGG*RGRRRK
Trigger: CTTCCTGCGGCGTCCCCGGCATCCTCCGGAAAATGT...GGTTTGGGCGGCTCCAGACCGCGCGGCCGCCCACAGCCCACCCGGCCAAAGCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450307.7
ENST00000460144.5
3UTR CAA 72 bp TTGGGTTCAGAAATCCCCACGGGTCTGGCAGAGGCTTaGGCCGGGTGGGCTGTGGGCGGCCGCGCGGTCTGG +
Preference number: 4 (lower is better)
Translates to: LGSEIPTGLAEA*AGWAVGGRAVW
Trigger: CCAGACCGCGCGGCCGCCCACAGCCCACCCGGCCAAAGCCTCTGCCAGACCCGTGGGGATTTCTGAACCCAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450307.7
ENST00000460144.5
CDS-3UTR TCA 90 bp AGGCTTTGGCCGGGTGGGCTGTGGGCGGCCGCGCGGTCTGGAGCCGCCCAAACCCAGCTTTCAGGAGACTaGGGTGGGAGGATGGATCTC +
Preference number: 4 (lower is better)
Translates to: RLWPGGLWAAARSGAAQTQLSGD*GGRMDL
Trigger: GAGATCCATCCTCCCACCTCAGTCTCCTGAAAGCTG...GGTTTGGGCGGCTCCAGACCGCGCGGCCGCCCACAGCCCACCCGGCCAAAGCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450307.7
ENST00000460144.5
CDS-3UTR GCA 90 bp GGTTTGTGTTGGCCTCTCGAGGGTCTGTCAACCAGGCGGCCTGGTGCTCTTCTGGGAGCCGCCCAAACCTaGGGCGGTCGCCAGGGTCCC +
Preference number: 4 (lower is better)
Translates to: GLCWPLEGLSTRRPGALLGAAQT*GGRQGP
Trigger: GGGACCCTGGCGACCGCCGCAGGTTTGGGCGGCTCC...CAGAAGAGCACCAGGCCGCCTGGTTGACAGACCCTCGAGAGGCCAACACAAACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480005.1
CDS-3UTR CCA 90 bp GGTTTGTGTTGGCCTCTCGAGGGTCTGTCAACCAGGCGGCCTGGTGCTCTTCTGCTGCGGTCTCCGCGGTaGGGCAGCAGCTCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: GLCWPLEGLSTRRPGALLLRSPR*GSSSRG
Trigger: GCCCCTGGAGCTGCTGCCCCACCGCGGAGACCGCAG...CAGAAGAGCACCAGGCCGCCTGGTTGACAGACCCTCGAGAGGCCAACACAAACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480005.1
CDS-3UTR CCA 90 bp CGCGGTCTGGAGCCGCCCAAACCTGCGGCGGTCGCCAGGGTCCCTGCGGTCTCCCCCTCTCGCTTCTCATaGATTCACCTGGAGATATGG +
Preference number: 4 (lower is better)
Translates to: RGLEPPKPAAVARVPAVSPSRFS*IHLEIW
Trigger: CCATATCTCCAGGTGAATCCATGAGAAGCGAGAGGG...GGAGACCGCAGGGACCCTGGCGACCGCCGCAGGTTTGGGCGGCTCCAGACCGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000450307.7
ENST00000460144.5
CDS-3UTR GCA 90 bp GGTTCAGAAATCCCCACGGGTCTGGCAGAGGCTTTGGCCGGGTGGGCTGTGGGCGTTAGCCCACTCCTCTaGTCGGGCCTAGGGACCCAT +
Preference number: 4 (lower is better)
Translates to: GSEIPTGLAEALAGWAVGVSPLL*SGLGTH
Trigger: ATGGGTCCCTAGGCCCGAGCAGAGGAGTGGGCTAAC...GCCCACAGCCCACCCGGCCAAAGCCTCTGCCAGACCCGTGGGGATTTCTGAACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460144.5
CDS-3UTR CCA 90 bp AGGCTTTGGCCGGGTGGGCTGTGGGCGGCCGCGCGGTCTGGAGCCGCCCAAACCTTTTGGCTCTTCTTCTaGCTGGACTGGATACCTTGG +
Preference number: 4 (lower is better)
Translates to: RLWPGGLWAAARSGAAQTFWLFF*LDWIPW
Trigger: CCAAGGTATCCAGTCCAGCCAGAAGAAGAGCCAAAA...GGTTTGGGCGGCTCCAGACCGCGCGGCCGCCCACAGCCCACCCGGCCAAAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450307.7
ENST00000460144.5
CDS-3UTR CCA 90 bp AGGCTTTGGCCGGGTGGGCTGTGGGCGGCCGCGCGGTCTGGAGCCGCCCAAACCTCCTTGGGGAAGGGCTaGATACTCTTCAGTCATCTT +
Preference number: 4 (lower is better)
Translates to: RLWPGGLWAAARSGAAQTSLGKG*ILFSHL
Trigger: AAGATGACTGAAGAGTATCCAGCCCTTCCCCAAGGA...GGTTTGGGCGGCTCCAGACCGCGCGGCCGCCCACAGCCCACCCGGCCAAAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450307.7
ENST00000460144.5
CDS-3UTR CCA 90 bp CGCGGTCTGGAGCCGCCCAAACCTGCGGCGGTCGCCAGGGTCCCTGCGGTCTCCTTCTTCTGGCTGGACTaGATACCTTGGAAGGAATCA +
Preference number: 4 (lower is better)
Translates to: RGLEPPKPAAVARVPAVSFFWLD*IPWKES
Trigger: TGATTCCTTCCAAGGTATCCAGTCCAGCCAGAAGAA...GGAGACCGCAGGGACCCTGGCGACCGCCGCAGGTTTGGGCGGCTCCAGACCGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450307.7
ENST00000460144.5
CDS-3UTR CCA 90 bp GGTTCAGAAATCCCCACGGGTCTGGCAGAGGCTTTGGCCGGGTGGGCTGTGGGCGCAGAGATAGCAAGGTaGAATCCCAGAGGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: GSEIPTGLAEALAGWAVGAEIAR*NPRGPG
Trigger: GCCTGGGCCTCTGGGATTCCACCTTGCTATCTCTGC...GCCCACAGCCCACCCGGCCAAAGCCTCTGCCAGACCCGTGGGGATTTCTGAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450307.7
ENST00000460144.5
CDS-3UTR CCA 90 bp GGCCTCTCGAGGGTCTGTCAACCAGGCGGCCTGGTGCTCTTCTGGGGAAGGAAGGTCAACCAGGCGGCCTaGTGCTCTTCTGGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: GLSRVCQPGGLVLFWGRKVNQAA*CSSGEG
Trigger: TCCTTCCCCAGAAGAGCACCAGGCCGCCTGGTTGAC...CTTCCTTCCCCAGAAGAGCACCAGGCCGCCTGGTTGACAGACCCTCGAGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480005.1
CDS-3UTR CCA 90 bp CTTGTCCACATTTTCCGGAGGATGCCGGGGACGCCGCAGGAAGCACTGCCTGTCTGGCGGTATCGGGTCTaGCAGAGGCTTTGGCCGGGT +
Preference number: 4 (lower is better)
Translates to: LVHIFRRMPGTPQEALPVWRYRV*QRLWPG
Trigger: ACCCGGCCAAAGCCTCTGCCAGACCCGATACCGCCA...GACAGGCAGTGCTTCCTGCGGCGTCCCCGGCATCCTCCGGAAAATGTGGACAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522977.5
CDS-3UTR GCA 90 bp TGTTGGCCTCTCGAGGGTCTGTCAACCAGGCGGCCTGGTGCTCTTCTGGGGAAGCAGCTCCCTTCTCTGTaGCCATGGCTGTCGCCTCCA +
Preference number: 4 (lower is better)
Translates to: CWPLEGLSTRRPGALLGKQLPSL*PWLSPP
Trigger: TGGAGGCGACAGCCATGGGCACAGAGAAGGGAGCTG...CTTCCCCAGAAGAGCACCAGGCCGCCTGGTTGACAGACCCTCGAGAGGCCAACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480005.1
CDS-3UTR GCA 90 bp CTTGTCCACATTTTCCGGAGGATGCCGGGGACGCCGCAGGAAGCACTGCCTGTCCGCCGCAGGAAGCACTaGCTGTCAGTGGTAGAGAGG +
Preference number: 4 (lower is better)
Translates to: LVHIFRRMPGTPQEALPVRRRKH*LSVVER
Trigger: CCTCTCTACCACTGACAGGCAGTGCTTCCTGCGGCG...GACAGGCAGTGCTTCCTGCGGCGTCCCCGGCATCCTCCGGAAAATGTGGACAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000450307.7
ENST00000460144.5
ENST00000522977.5
CDS-3UTR GCA 90 bp GTGTTGGCCTCTCGAGGGTCTGTCAACCAGGCGGCCTGGTGCTCTTCTGGGGAAAACCAGGCGGCCTGGTaGTCTTCTGGGGAAGGAAGG +
Preference number: 4 (lower is better)
Translates to: VLASRGSVNQAAWCSSGENQAAW*SSGEGR
Trigger: CCTTCCTTCCCCAGAAGAGCACCAGGCCGCCTGGTT...TTCCCCAGAAGAGCACCAGGCCGCCTGGTTGACAGACCCTCGAGAGGCCAACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000480005.1
CDS-3UTR CCA 90 bp TCCACATTTTCCGGAGGATGCCGGGGACGCCGCAGGAAGCACTGCCTGTCAGTGAAATCCCCACGGGTCTaGCAGAGGCTTTGGCCGGGT +
Preference number: 4 (lower is better)
Translates to: STFSGGCRGRRRKHCLSVKSPRV*QRLWPG
Trigger: ACCCGGCCAAAGCCTCTGCCAGACCCGTGGGGATTT...CACTGACAGGCAGTGCTTCCTGCGGCGTCCCCGGCATCCTCCGGAAAATGTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000450307.7
ENST00000460144.5
CDS-3UTR GCA 90 bp GTGTGGCTCAGTTTCAATCCTGAAGGTTTTTCCTCTTGTCCGGGGAACCTTGGCGGAGCCGCCCAAACCTaGGGCGGTCGCCAGGGTCCC +
Preference number: 4 (lower is better)
Translates to: VWLSFNPEGFSSCPGNLGGAAQT*GGRQGP
Trigger: GGGACCCTGGCGACCGCCGCAGGTTTGGGCGGCTCC...GCCAAGGTTCCCCGGACAAGAGGAAAAACCTTCAGGATTGAAACTGAGCCACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
ENST00000522977.5
CDS-3UTR CCA 90 bp GTGTGGCTCAGTTTCAATCCTGAAGGTTTTTCCTCTTGTCCGGGGAACCTTGGCCTGCGGTCTCCGCGGTaGGGCAGCAGCTCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: VWLSFNPEGFSSCPGNLGLRSPR*GSSSRG
Trigger: GCCCCTGGAGCTGCTGCCCCACCGCGGAGACCGCAG...GCCAAGGTTCCCCGGACAAGAGGAAAAACCTTCAGGATTGAAACTGAGCCACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
ENST00000522977.5
CDS-3UTR CCA 90 bp TCCACATTTTCCGGAGGATGCCGGGGACGCCGCAGGAAGCACTGCCTGTCAGTGGCAGAGATAGCAAGGTaGAATCCCAGAGGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: STFSGGCRGRRRKHCLSVAEIAR*NPRGPG
Trigger: GCCTGGGCCTCTGGGATTCCACCTTGCTATCTCTGC...CACTGACAGGCAGTGCTTCCTGCGGCGTCCCCGGCATCCTCCGGAAAATGTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450307.7
ENST00000460144.5
CDS-3UTR CCA 90 bp TTGGCCTCTCGAGGGTCTGTCAACCAGGCGGCCTGGTGCTCTTCTGGGGAAGGAGGCCTGGTGCTCTTCTaGGGAAGGAAGGATCAGGAC +
Preference number: 4 (lower is better)
Translates to: LASRGSVNQAAWCSSGEGGLVLF*GRKDQD
Trigger: GTCCTGATCCTTCCTTCCCCAGAAGAGCACCAGGCC...TCCTTCCCCAGAAGAGCACCAGGCCGCCTGGTTGACAGACCCTCGAGAGGCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480005.1
CDS-3UTR GCA 90 bp GTGCGTGTACAGGTCCGACTCGATCACCACCTGCCGGGCGGGGGAAACGCGGTTCTTCTTTTCAATGGTTaGCCCCAGAGACACACTCTC +
Preference number: 4 (lower is better)
Translates to: VRVQVRLDHHLPGGGNAVLLFNG*PQRHTL
Trigger: GAGAGTGTGTCTCTGGGGGCAACCATTGAAAAGAAG...AACCGCGTTTCCCCCGCCCGGCAGGTGGTGATCGAGTCGGACCTGTACACGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000460144.5
CDS-3UTR GCA 90 bp GTTTCAATCCTGAAGGTTTTTCCTCTTGTCCGGGGAACCTTGGCCAACACAGGGGACTCGATCACCACCTaGCGGGCGGGGGAAACGCGG +
Preference number: 4 (lower is better)
Translates to: VSILKVFPLVRGTLANTGDSITT*RAGETR
Trigger: CCGCGTTTCCCCCGCCCGGCAGGTGGTGATCGAGTC...CCCTGTGTTGGCCAAGGTTCCCCGGACAAGAGGAAAAACCTTCAGGATTGAAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000460144.5
CDS-3UTR CCA 90 bp TGCAGCTGGCATGGGTTTGTGTTGGCCTCTCGAGGGTCTGTCAACCAGGCGGCCGGCTCTTCTTCTGGCTaGACTGGATACCTTGGAAGG +
Preference number: 4 (lower is better)
Translates to: CSWHGFVLASRGSVNQAAGSSSG*TGYLGR
Trigger: CCTTCCAAGGTATCCAGTCCAGCCAGAAGAAGAGCC...GGCCGCCTGGTTGACAGACCCTCGAGAGGCCAACACAAACCCATGCCAGCTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480005.1
CDS-3UTR CCA 90 bp GGTTCAGAAATCCCCACGGGTCTGGCAGAGGCTTTGGCCGGGTGGGCTGTGGGCGAGTCTTCTTTTCAATaGTTGCCCCCAGAGACACAC +
Preference number: 4 (lower is better)
Translates to: GSEIPTGLAEALAGWAVGESSFQ*LPPETH
Trigger: GTGTGTCTCTGGGGGCAACCATTGAAAAGAAGACTC...GCCCACAGCCCACCCGGCCAAAGCCTCTGCCAGACCCGTGGGGATTTCTGAACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000450307.7
ENST00000460144.5
CDS-3UTR TCA 90 bp TGTGTTGGCCTCTCGAGGGTCTGTCAACCAGGCGGCCTGGTGCTCTTCTGGGGACTCATGAGATATTTCTaGCGCCTGCATGCCTATGGG +
Preference number: 4 (lower is better)
Translates to: CVGLSRVCQPGGLVLFWGLMRYF*RLHAYG
Trigger: CCCATAGGCATGCAGGCGTCAGAAATATCTCATGAG...TCCCCAGAAGAGCACCAGGCCGCCTGGTTGACAGACCCTCGAGAGGCCAACACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480005.1
CDS-3UTR GCA 90 bp GTTTTTCCTCTTGTCCGGGGAACCTTGGCCAACACAGGGCACTTGAAGAGGGTCCAGCTCCCTTCTCTGTaGCCATGGCTGTCGCCTCCA +
Preference number: 4 (lower is better)
Translates to: VFPLVRGTLANTGHLKRVQLPSL*PWLSPP
Trigger: TGGAGGCGACAGCCATGGGCACAGAGAAGGGAGCTG...GACCCTCTTCAAGTGCCCTGTGTTGGCCAAGGTTCCCCGGACAAGAGGAAAAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
ENST00000522977.5
CDS-3UTR CCA 90 bp ACCACAGCATTCTTCTATCTCAGATTCCATCTTTACACAGTACTTCGGGCAGCCCTGCGGTCTCCGCGGTaGGGCAGCAGCTCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: TTAFFYLRFHLYTVLRAALRSPR*GSSSRG
Trigger: GCCCCTGGAGCTGCTGCCCCACCGCGGAGACCGCAG...GGCTGCCCGAAGTACTGTGTAAAGATGGAATCTGAGATAGAAGAATGCTGTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR CCA 90 bp CCAGGCCTCTCAGCCACCCTCTCGCTTCTCATGGATTCACCTGGAGATATGGAAAAATCCCCACGGGTCTaGCAGAGGCTTTGGCCGGGT +
Preference number: 4 (lower is better)
Translates to: PGLSATLSLLMDSPGDMEKSPRV*QRLWPG
Trigger: ACCCGGCCAAAGCCTCTGCCAGACCCGTGGGGATTT...TTCCATATCTCCAGGTGAATCCATGAGAAGCGAGAGGGTGGCTGAGAGGCCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR CCA 90 bp TTGGCCTCTCGAGGGTCTGTCAACCAGGCGGCCTGGTGCTCTTCTGGGGAAGGAACGCCTGCATGCCTATaGGAGGTTCTGAATATGGCT +
Preference number: 4 (lower is better)
Translates to: LASRGSVNQAAWCSSGEGTPACL*EVLNMA
Trigger: AGCCATATTCAGAACCTCCCATAGGCATGCAGGCGT...TCCTTCCCCAGAAGAGCACCAGGCCGCCTGGTTGACAGACCCTCGAGAGGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480005.1
CDS-3UTR TCA 90 bp TGTTGGCCTCTCGAGGGTCTGTCAACCAGGCGGCCTGGTGCTCTTCTGGGGAAGGCCTATGGGAGGTTCTaGATATGGCTCGTGATTACA +
Preference number: 4 (lower is better)
Translates to: CWPLEGLSTRRPGALLGKAYGRF*IWLVIT
Trigger: TGTAATCACGAGCCATATTCAGAACCTCCCATAGGC...CTTCCCCAGAAGAGCACCAGGCCGCCTGGTTGACAGACCCTCGAGAGGCCAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480005.1
CDS-3UTR GCA 90 bp GGCCTCCATTTCCCCCTCTGCAGATTGGGAATAATTGTGCTTTCTTCCACAGGGAGCTCCAGGGGCTGGTaGGTGTACAGGTCCGACTCG +
Preference number: 4 (lower is better)
Translates to: GLHFPLCRLGIIVLSSTGSSRGW*VYRSDS
Trigger: CGAGTCGGACCTGTACACGCACCAGCCCCTGGAGCT...CCCTGTGGAAGAAAGCACAATTATTCCCAATCTGCAGAGGGGGAAATGGAGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR GCA 90 bp GGTTTGTGTTGGCCTCTCGAGGGTCTGTCAACCAGGCGGCCTGGTGCTCTTCTGCAGTTGATGAGGCGCTaGAGAGACCCAGGATTATTG +
Preference number: 4 (lower is better)
Translates to: GLCWPLEGLSTRRPGALLQLMRR*RDPGLL
Trigger: CAATAATCCTGGGTCTCTGCAGCGCCTCATCAACTG...CAGAAGAGCACCAGGCCGCCTGGTTGACAGACCCTCGAGAGGCCAACACAAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480005.1
CDS-3UTR CCA 90 bp GGCCTCCATTTCCCCCTCTGCAGATTGGGAATAATTGTGCTTTCTTCCACAGGGAGCAGCTCCAGGGGCTaGTGCGTGTACAGGTCCGAC +
Preference number: 4 (lower is better)
Translates to: GLHFPLCRLGIIVLSSTGSSSRG*CVYRSD
Trigger: GTCGGACCTGTACACGCACCAGCCCCTGGAGCTGCT...CCCTGTGGAAGAAAGCACAATTATTCCCAATCTGCAGAGGGGGAAATGGAGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR CCA 90 bp TCCACATTTTCCGGAGGATGCCGGGGACGCCGCAGGAAGCACTGCCTGTCAGTGTCCTTGGGGAAGGGCTaGATACTCTTCAGTCATCTT +
Preference number: 4 (lower is better)
Translates to: STFSGGCRGRRRKHCLSVSLGKG*ILFSHL
Trigger: AAGATGACTGAAGAGTATCCAGCCCTTCCCCAAGGA...CACTGACAGGCAGTGCTTCCTGCGGCGTCCCCGGCATCCTCCGGAAAATGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000450307.7
ENST00000460144.5
ENST00000522977.5
CDS-3UTR TCA 90 bp TCCACATTTTCCGGAGGATGCCGGGGACGCCGCAGGAAGCACTGCCTGTCAGTGAGGGTAATCAATGAGTaGGGGAGGATAATGGGTTTG +
Preference number: 4 (lower is better)
Translates to: STFSGGCRGRRRKHCLSVRVINE*GRIMGL
Trigger: CAAACCCATTATCCTCCCTCACTCATTGATTACCCT...CACTGACAGGCAGTGCTTCCTGCGGCGTCCCCGGCATCCTCCGGAAAATGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000450307.7
ENST00000460144.5
ENST00000522977.5
CDS-3UTR TCA 90 bp GGTTCAGAAATCCCCACGGGTCTGGCAGAGGCTTTGGCCGGGTGGGCTGTGGGCCTGAACTATTTTGTGTaGAGGAGTAGCTCTAACACA +
Preference number: 4 (lower is better)
Translates to: GSEIPTGLAEALAGWAVGLNYFV*RSSSNT
Trigger: TGTGTTAGAGCTACTCCTTCACACAAAATAGTTCAG...GCCCACAGCCCACCCGGCCAAAGCCTCTGCCAGACCCGTGGGGATTTCTGAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450307.7
ENST00000460144.5
CDS-3UTR TCA 90 bp GTTTTTCCTCTTGTCCGGGGAACCTTGGCCAACACAGGGCACTTGAAGAGGGTCCAGCTTTCAGGAGACTaGGGTGGGAGGATGGATCTC +
Preference number: 4 (lower is better)
Translates to: VFPLVRGTLANTGHLKRVQLSGD*GGRMDL
Trigger: GAGATCCATCCTCCCACCTCAGTCTCCTGAAAGCTG...GACCCTCTTCAAGTGCCCTGTGTTGGCCAAGGTTCCCCGGACAAGAGGAAAAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR TCA 90 bp CAATGGTTGAAGAGCAGAGATAGCAAGGTGGAATCCCAGAGGCCCAGGCCTCTCCAGCTTTCAGGAGACTaGGGTGGGAGGATGGATCTC +
Preference number: 4 (lower is better)
Translates to: QWLKSRDSKVESQRPRPLQLSGD*GGRMDL
Trigger: GAGATCCATCCTCCCACCTCAGTCTCCTGAAAGCTG...GAGAGGCCTGGGCCTCTGGGATTCCACCTTGCTATCTCTGCTCTTCAACCATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR GCA 90 bp TGCGTGTGGCTCAGTTTCAATCCTGAAGGTTTTTCCTCTTGTCCGGGGAACCTTAGCTCCAGGGGCTGGTaGGTGTACAGGTCCGACTCG +
Preference number: 4 (lower is better)
Translates to: CVWLSFNPEGFSSCPGNLSSRGW*VYRSDS
Trigger: CGAGTCGGACCTGTACACGCACCAGCCCCTGGAGCT...AAGGTTCCCCGGACAAGAGGAAAAACCTTCAGGATTGAAACTGAGCCACACGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
ENST00000522977.5
CDS-3UTR GCA 90 bp GTTTCAATCCTGAAGGTTTTTCCTCTTGTCCGGGGAACCTTGGCCAACACAGGGCAGCTCCCTTCTCTGTaGCCATGGCTGTCGCCTCCA +
Preference number: 4 (lower is better)
Translates to: VSILKVFPLVRGTLANTGQLPSL*PWLSPP
Trigger: TGGAGGCGACAGCCATGGGCACAGAGAAGGGAGCTG...CCCTGTGTTGGCCAAGGTTCCCCGGACAAGAGGAAAAACCTTCAGGATTGAAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
ENST00000522977.5
CDS-3UTR GCA 90 bp GTGTGGCTCAGTTTCAATCCTGAAGGTTTTTCCTCTTGTCCGGGGAACCTTGGCCAGCTCCCTTCTCTGTaGCCATGGCTGTCGCCTCCA +
Preference number: 4 (lower is better)
Translates to: VWLSFNPEGFSSCPGNLGQLPSL*PWLSPP
Trigger: TGGAGGCGACAGCCATGGGCACAGAGAAGGGAGCTG...GCCAAGGTTCCCCGGACAAGAGGAAAAACCTTCAGGATTGAAACTGAGCCACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
ENST00000522977.5
CDS-3UTR GCA 90 bp GTGTGGCTCAGTTTCAATCCTGAAGGTTTTTCCTCTTGTCCGGGGAACCTTGGCACATTTTCCGGAGGATaGCGGGGACGCCGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: VWLSFNPEGFSSCPGNLGTFSGG*RGRRRK
Trigger: CTTCCTGCGGCGTCCCCGGCATCCTCCGGAAAATGT...GCCAAGGTTCCCCGGACAAGAGGAAAAACCTTCAGGATTGAAACTGAGCCACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
ENST00000522977.5
CDS-3UTR GCA 90 bp GAGGGTCTGTCAACCAGGCGGCCTGGTGCTCTTCTGGGGAAGGAAGGATCAGGATTTCTGACGCCTGCATaGCTATGGGAGGTTCTGAAT +
Preference number: 4 (lower is better)
Translates to: EGLSTRRPGALLGKEGSGFLTPA*LWEVLN
Trigger: ATTCAGAACCTCCCATAGGCATGCAGGCGTCAGAAA...TCCTGATCCTTCCTTCCCCAGAAGAGCACCAGGCCGCCTGGTTGACAGACCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480005.1
CDS-3UTR CCA 90 bp CTTGTCCACATTTTCCGGAGGATGCCGGGGACGCCGCAGGAAGCACTGCCTGTCTTCTTCTGGCTGGACTaGATACCTTGGAAGGAATCA +
Preference number: 4 (lower is better)
Translates to: LVHIFRRMPGTPQEALPVFFWLD*IPWKES
Trigger: TGATTCCTTCCAAGGTATCCAGTCCAGCCAGAAGAA...GACAGGCAGTGCTTCCTGCGGCGTCCCCGGCATCCTCCGGAAAATGTGGACAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000450307.7
ENST00000460144.5
ENST00000522977.5
CDS-3UTR CCA 90 bp TCACACATAGCAGTTGAGTCTGAGACCTGTAATGTGGCCAAACACTTCTTTGTACTGCGGTCTCCGCGGTaGGGCAGCAGCTCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: SHIAVESETCNVAKHFFVLRSPR*GSSSRG
Trigger: GCCCCTGGAGCTGCTGCCCCACCGCGGAGACCGCAG...TACAAAGAAGTGTTTGGCCACATTACAGGTCTCAGACTCAACTGCTATGTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR TCA 90 bp GGTTCAGAAATCCCCACGGGTCTGGCAGAGGCTTTGGCCGGGTGGGCTGTGGGCATAGTGCTTTGTCCTTaGAAATTGTACCTTGTCAAG +
Preference number: 4 (lower is better)
Translates to: GSEIPTGLAEALAGWAVGIVLCP*KLYLVK
Trigger: CTTGACAAGGTACAATTTTCAAGGACAAAGCACTAT...GCCCACAGCCCACCCGGCCAAAGCCTCTGCCAGACCCGTGGGGATTTCTGAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450307.7
ENST00000460144.5
CDS-3UTR TCA 90 bp GTTTTTCCTCTTGTCCGGGGAACCTTGGCCAACACAGGGCACTTGAAGAGGGTCTGGTCCTGTAATCTCTaGAGGCCTCCATTTCCCCCT +
Preference number: 4 (lower is better)
Translates to: VFPLVRGTLANTGHLKRVWSCNL*RPPFPP
Trigger: AGGGGGAAATGGAGGCCTTCAGAGATTACAGGACCA...GACCCTCTTCAAGTGCCCTGTGTTGGCCAAGGTTCCCCGGACAAGAGGAAAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR TCA 90 bp CAATGGTTGAAGAGCAGAGATAGCAAGGTGGAATCCCAGAGGCCCAGGCCTCTCTTGAACCCAGGAGTTTaGGACCAGTCTGGGCAACAC +
Preference number: 4 (lower is better)
Translates to: QWLKSRDSKVESQRPRPLLNPGV*DQSGQH
Trigger: GTGTTGCCCAGACTGGTCTCAAACTCCTGGGTTCAA...GAGAGGCCTGGGCCTCTGGGATTCCACCTTGCTATCTCTGCTCTTCAACCATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR CCA 90 bp GTTTTTCCTCTTGTCCGGGGAACCTTGGCCAACACAGGGCACTTGAAGAGGGTCGGCTCTTCTTCTGGCTaGACTGGATACCTTGGAAGG +
Preference number: 4 (lower is better)
Translates to: VFPLVRGTLANTGHLKRVGSSSG*TGYLGR
Trigger: CCTTCCAAGGTATCCAGTCCAGCCAGAAGAAGAGCC...GACCCTCTTCAAGTGCCCTGTGTTGGCCAAGGTTCCCCGGACAAGAGGAAAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
ENST00000522977.5
CDS-3UTR CCA 90 bp TTCTGGACTCCAACATCTCTATTGAATGAGACTTTTGAACAGTCCTCTGGGATACTGCGGTCTCCGCGGTaGGGCAGCAGCTCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: FWTPTSLLNETFEQSSGILRSPR*GSSSRG
Trigger: GCCCCTGGAGCTGCTGCCCCACCGCGGAGACCGCAG...TATCCCAGAGGACTGTTCAAAAGTCTCATTCAATAGAGATGTTGGAGTCCAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR TCA 90 bp TCCACATTTTCCGGAGGATGCCGGGGACGCCGCAGGAAGCACTGCCTGTCAGTGTGTACCTTGTCAAGGTaGAGTAAATGCAGTAATGGA +
Preference number: 4 (lower is better)
Translates to: STFSGGCRGRRRKHCLSVCTLSR*SKCSNG
Trigger: TCCATTACTGCATTTACTTCACCTTGACAAGGTACA...CACTGACAGGCAGTGCTTCCTGCGGCGTCCCCGGCATCCTCCGGAAAATGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000450307.7
ENST00000460144.5
ENST00000522977.5
CDS-3UTR TCA 90 bp CTTGTCCACATTTTCCGGAGGATGCCGGGGACGCCGCAGGAAGCACTGCCTGTCAGTTTAGGCCACAGATaGCAAATATACAAGGCATGT +
Preference number: 4 (lower is better)
Translates to: LVHIFRRMPGTPQEALPVSLGHR*QIYKAC
Trigger: ACATGCCTTGTATATTTGTCATCTGTGGCCTAAACT...GACAGGCAGTGCTTCCTGCGGCGTCCCCGGCATCCTCCGGAAAATGTGGACAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450307.7
ENST00000460144.5
CDS-3UTR GCA 90 bp CTCTGTTACGACCAGCATAGGTTACTGGTTTGCTCCCTAACTTTGTTCTGGACTAGCTCCAGGGGCTGGTaGGTGTACAGGTCCGACTCG +
Preference number: 4 (lower is better)
Translates to: LCYDQHRLLVCSLTLFWTSSRGW*VYRSDS
Trigger: CGAGTCGGACCTGTACACGCACCAGCCCCTGGAGCT...AGTCCAGAACAAAGTTAGGGAGCAAACCAGTAACCTATGCTGGTCGTAACAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR GCA 90 bp AGCAAGGGATTATTGATTCCACTAGACTATGCCACTTCAGAAAACATTAGCAGTGGAGCCGCCCAAACCTaGGGCGGTCGCCAGGGTCCC +
Preference number: 4 (lower is better)
Translates to: SKGLLIPLDYATSENISSGAAQT*GGRQGP
Trigger: GGGACCCTGGCGACCGCCGCAGGTTTGGGCGGCTCC...ACTGCTAATGTTTTCTGAAGTGGCATAGTCTAGTGGAATCAATAATCCCTTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
ENST00000522977.5
CDS-3UTR GCA 90 bp GTGTTGGCCTCTCGAGGGTCTGTCAACCAGGCGGCCTGGTGCTCTTCTGGGGAACAGAGATTTTCCATATaGTCGATTCCCACACAGATT +
Preference number: 4 (lower is better)
Translates to: VLASRGSVNQAAWCSSGEQRFSI*SIPTQI
Trigger: AATCTGTGTGGGAATCGAGCATATGGAAAATCTCTG...TTCCCCAGAAGAGCACCAGGCCGCCTGGTTGACAGACCCTCGAGAGGCCAACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480005.1
CDS-3UTR CCA 90 bp GTTTTTCCTCTTGTCCGGGGAACCTTGGCCAACACAGGGCACTTGAAGAGGGTCCGATCACCACATTCTTaGTCAAGAGGTGCTGAGAGC +
Preference number: 4 (lower is better)
Translates to: VFPLVRGTLANTGHLKRVRSPHS*SRGAES
Trigger: GCTCTCAGCACCTCTTGACCAAGAATGTGGTGATCG...GACCCTCTTCAAGTGCCCTGTGTTGGCCAAGGTTCCCCGGACAAGAGGAAAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305454.8
ENST00000522977.5
CDS-3UTR CCA 90 bp GTTTTTCCTCTTGTCCGGGGAACCTTGGCCAACACAGGGCACTTGAAGAGGGTCAAGCAGGGAGTCCACTaGAGAGAAGTTAAGGACCTG +
Preference number: 4 (lower is better)
Translates to: VFPLVRGTLANTGHLKRVKQGVH*REVKDL
Trigger: CAGGTCCTTAACTTCTCTCCAGTGGACTCCCTGCTT...GACCCTCTTCAAGTGCCCTGTGTTGGCCAAGGTTCCCCGGACAAGAGGAAAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR TCA 90 bp CTTGTCCACATTTTCCGGAGGATGCCGGGGACGCCGCAGGAAGCACTGCCTGTCATAGTGCTTTGTCCTTaGAAATTGTACCTTGTCAAG +
Preference number: 4 (lower is better)
Translates to: LVHIFRRMPGTPQEALPVIVLCP*KLYLVK
Trigger: CTTGACAAGGTACAATTTTCAAGGACAAAGCACTAT...GACAGGCAGTGCTTCCTGCGGCGTCCCCGGCATCCTCCGGAAAATGTGGACAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000450307.7
ENST00000460144.5
ENST00000522977.5
CDS-3UTR TCA 90 bp CTTGTCCACATTTTCCGGAGGATGCCGGGGACGCCGCAGGAAGCACTGCCTGTCGCAAGAATTACTAATTaGCCACAGCATTCTTCTATC +
Preference number: 4 (lower is better)
Translates to: LVHIFRRMPGTPQEALPVARITN*PQHSSI
Trigger: GATAGAAGAATGCTGTGGTCAATTAGTAATTCTTGC...GACAGGCAGTGCTTCCTGCGGCGTCCCCGGCATCCTCCGGAAAATGTGGACAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450307.7
ENST00000460144.5
CDS-3UTR TCA 90 bp GTTTCAATCCTGAAGGTTTTTCCTCTTGTCCGGGGAACCTTGGCCAACACAGGGTTGAACCCAGGAGTTTaGGACCAGTCTGGGCAACAC +
Preference number: 4 (lower is better)
Translates to: VSILKVFPLVRGTLANTGLNPGV*DQSGQH
Trigger: GTGTTGCCCAGACTGGTCTCAAACTCCTGGGTTCAA...CCCTGTGTTGGCCAAGGTTCCCCGGACAAGAGGAAAAACCTTCAGGATTGAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR GCA 90 bp CCATTGTGTTTACAAGTGCCTCAAAGTCCATTTACACTAGAAAATCACACACTTGGAGCCGCCCAAACCTaGGGCGGTCGCCAGGGTCCC +
Preference number: 4 (lower is better)
Translates to: PLCLQVPQSPFTLENHTLGAAQT*GGRQGP
Trigger: GGGACCCTGGCGACCGCCGCAGGTTTGGGCGGCTCC...AAGTGTGTGATTTTCTAGTGTAAATGGACTTTGAGGCACTTGTAAACACAATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
ENST00000522977.5
CDS-3UTR GCA 90 bp GCATTCTTCTATCTCAGATTCCATCTTTACACAGTACTTCGGGCAGCCTCTACCCGCCGCAGGAAGCACTaGCTGTCAGTGGTAGAGAGG +
Preference number: 4 (lower is better)
Translates to: AFFYLRFHLYTVLRAASTRRRKH*LSVVER
Trigger: CCTCTCTACCACTGACAGGCAGTGCTTCCTGCGGCG...GGTAGAGGCTGCCCGAAGTACTGTGTAAAGATGGAATCTGAGATAGAAGAATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR GCA 90 bp ACCACAGCATTCTTCTATCTCAGATTCCATCTTTACACAGTACTTCGGGCAGCCACATTTTCCGGAGGATaGCGGGGACGCCGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: TTAFFYLRFHLYTVLRAATFSGG*RGRRRK
Trigger: CTTCCTGCGGCGTCCCCGGCATCCTCCGGAAAATGT...GGCTGCCCGAAGTACTGTGTAAAGATGGAATCTGAGATAGAAGAATGCTGTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR GCA 90 bp CTTGTCCACATTTTCCGGAGGATGCCGGGGACGCCGCAGGAAGCACTGCCTGTCCATTGTGTTTACAAGTaGCTCAAAGTCCATTTACAC +
Preference number: 4 (lower is better)
Translates to: LVHIFRRMPGTPQEALPVHCVYK*LKVHLH
Trigger: GTGTAAATGGACTTTGAGGCACTTGTAAACACAATG...GACAGGCAGTGCTTCCTGCGGCGTCCCCGGCATCCTCCGGAAAATGTGGACAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000450307.7
ENST00000460144.5
ENST00000522977.5
CDS-3UTR GCA 90 bp CCAGGCCTCTCAGCCACCCTCTCGCTTCTCATGGATTCACCTGGAGATATGGAAGAGAAGTTAAGGACCTaGTGTCTGGTTCCACTACCT +
Preference number: 4 (lower is better)
Translates to: PGLSATLSLLMDSPGDMEEKLRT*CLVPLP
Trigger: AGGTAGTGGAACCAGACAGCAGGTCCTTAACTTCTC...TTCCATATCTCCAGGTGAATCCATGAGAAGCGAGAGGGTGGCTGAGAGGCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR CCA 90 bp TTTGTACTTGACACACTTCTTAACCGGTGGGCAGGGGATCTTGAACTTACTCATAGCAGCTCCAGGGGCTaGTGCGTGTACAGGTCCGAC +
Preference number: 4 (lower is better)
Translates to: FVLDTLLNRWAGDLELTHSSSRG*CVYRSD
Trigger: GTCGGACCTGTACACGCACCAGCCCCTGGAGCTGCT...ATGAGTAAGTTCAAGATCCCCTGCCCACCGGTTAAGAAGTGTGTCAAGTACAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480005.1
CDS-3UTR CCA 90 bp CAATGGTTGAAGAGCAGAGATAGCAAGGTGGAATCCCAGAGGCCCAGGCCTCTCTCCTTGGGGAAGGGCTaGATACTCTTCAGTCATCTT +
Preference number: 4 (lower is better)
Translates to: QWLKSRDSKVESQRPRPLSLGKG*ILFSHL
Trigger: AAGATGACTGAAGAGTATCCAGCCCTTCCCCAAGGA...GAGAGGCCTGGGCCTCTGGGATTCCACCTTGCTATCTCTGCTCTTCAACCATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR CCA 90 bp ACAAACGTAATTGTAGGATCCTCTGTTACGACCAGCATAGGTTACTGGTTTGCTGGGCCTAGGGACCCATaGAACCCCAGGGCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: TNVIVGSSVTTSIGYWFAGPRDP*NPRAGA
Trigger: AGCTCCTGCCCTGGGGTTCCATGGGTCCCTAGGCCC...AGCAAACCAGTAACCTATGCTGGTCGTAACAGAGGATCCTACAATTACGTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460144.5
CDS-3UTR CCA 90 bp GGATTATTGGCCTCATTAAAAGATAATTTGCAGCTGGCATGGGTTTGTGTTGGCGGAGGCCACAGGCAGTaGGGCCAGAGACGCAGCACT +
Preference number: 4 (lower is better)
Translates to: GLLASLKDNLQLAWVCVGGGHRQ*GQRRST
Trigger: AGTGCTGCGTCTCTGGCCCCACTGCCTGTGGCCTCC...GCCAACACAAACCCATGCCAGCTGCAAATTATCTTTTAATGAGGCCAATAATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480005.1
CDS-3UTR GCA 90 bp GACCCAGGATTATTGGCCTCATTAAAAGATAATTTGCAGCTGGCATGGGTTTGTAGCTCCAGGGGCTGGTaGGTGTACAGGTCCGACTCG +
Preference number: 4 (lower is better)
Translates to: DPGLLASLKDNLQLAWVCSSRGW*VYRSDS
Trigger: CGAGTCGGACCTGTACACGCACCAGCCCCTGGAGCT...ACAAACCCATGCCAGCTGCAAATTATCTTTTAATGAGGCCAATAATCCTGGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480005.1
CDS-3UTR GCA 90 bp AAACCTTCAGGGGCAGAGTTTAGGCCACAGATGACAAATATACAAGGCATGTGTCGCCGCAGGAAGCACTaGCTGTCAGTGGTAGAGAGG +
Preference number: 4 (lower is better)
Translates to: KPSGAEFRPQMTNIQGMCRRRKH*LSVVER
Trigger: CCTCTCTACCACTGACAGGCAGTGCTTCCTGCGGCG...ACACATGCCTTGTATATTTGTCATCTGTGGCCTAAACTCTGCCCCTGAAGGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR GCA 90 bp GGTGCGTGTGGCTCAGTTTCAATCCTGAAGGTTTTTCCTCTTGTCCGGGGAACCGAGAAGTTAAGGACCTaGTGTCTGGTTCCACTACCT +
Preference number: 4 (lower is better)
Translates to: GACGSVSILKVFPLVRGTEKLRT*CLVPLP
Trigger: AGGTAGTGGAACCAGACAGCAGGTCCTTAACTTCTC...GGTTCCCCGGACAAGAGGAAAAACCTTCAGGATTGAAACTGAGCCACACGCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR CCA 90 bp CACCCTCTCGCTTCTCATGGATTCACCTGGAGATATGGAAATAGGGAACTCAGCGGCTCTTCTTCTGGCTaGACTGGATACCTTGGAAGG +
Preference number: 4 (lower is better)
Translates to: HPLASHGFTWRYGNRELSGSSSG*TGYLGR
Trigger: CCTTCCAAGGTATCCAGTCCAGCCAGAAGAAGAGCC...GCTGAGTTCCCTATTTCCATATCTCCAGGTGAATCCATGAGAAGCGAGAGGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
3UTR CAA 72 bp TCAATCCTGAAGGTTTTTCCTCTTGTCCGGGGAACCTaGGCCAACACAGGGCACTTGAAGAGGGTCACCTTT +
Preference number: 4 (lower is better)
Translates to: SILKVFPLVRGT*ANTGHLKRVTF
Trigger: AAAGGTGACCCTCTTCAAGTGCCCTGTGTTGGCCAAGGTTCCCCGGACAAGAGGAAAAACCTTCAGGATTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000450307.7
ENST00000460144.5
ENST00000522977.5
CDS-3UTR GCA 90 bp AGTACTTCGGGCAGCCTCTACCCATCAATCATGTTTAGTGTTTGGGATGAAAATACATTTTCCGGAGGATaGCGGGGACGCCGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: STSGSLYPSIMFSVWDENTFSGG*RGRRRK
Trigger: CTTCCTGCGGCGTCCCCGGCATCCTCCGGAAAATGT...ATTTTCATCCCAAACACTAAACATGATTGATGGGTAGAGGCTGCCCGAAGTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR GCA 90 bp GTTTTTCCTCTTGTCCGGGGAACCTTGGCCAACACAGGGCACTTGAAGAGGGTCGGGGCAGTTTTATATTaGCTTCGAGGGACATTTCTT +
Preference number: 4 (lower is better)
Translates to: VFPLVRGTLANTGHLKRVGAVLY*LRGTFL
Trigger: AAGAAATGTCCCTCGAAGGCAATATAAAACTGCCCC...GACCCTCTTCAAGTGCCCTGTGTTGGCCAAGGTTCCCCGGACAAGAGGAAAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
ENST00000522977.5
CDS-3UTR GCA 90 bp GGTGCGTGTGGCTCAGTTTCAATCCTGAAGGTTTTTCCTCTTGTCCGGGGAACCCTCCATTTCCCCCTCTaGAGATTGGGAATAATTGTG +
Preference number: 4 (lower is better)
Translates to: GACGSVSILKVFPLVRGTLHFPL*RLGIIV
Trigger: CACAATTATTCCCAATCTGCAGAGGGGGAAATGGAG...GGTTCCCCGGACAAGAGGAAAAACCTTCAGGATTGAAACTGAGCCACACGCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR GCA 90 bp GTTTTTCCTCTTGTCCGGGGAACCTTGGCCAACACAGGGCACTTGAAGAGGGTCCATAGGTTACTGGTTTaGTCCCTAACTTTGTTCTGG +
Preference number: 4 (lower is better)
Translates to: VFPLVRGTLANTGHLKRVHRLLV*SLTLFW
Trigger: CCAGAACAAAGTTAGGGAGCAAACCAGTAACCTATG...GACCCTCTTCAAGTGCCCTGTGTTGGCCAAGGTTCCCCGGACAAGAGGAAAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR CCA 90 bp GTGTGGCTCAGTTTCAATCCTGAAGGTTTTTCCTCTTGTCCGGGGAACCTTGGCTTTTGGCTCTTCTTCTaGCTGGACTGGATACCTTGG +
Preference number: 4 (lower is better)
Translates to: VWLSFNPEGFSSCPGNLGFWLFF*LDWIPW
Trigger: CCAAGGTATCCAGTCCAGCCAGAAGAAGAGCCAAAA...GCCAAGGTTCCCCGGACAAGAGGAAAAACCTTCAGGATTGAAACTGAGCCACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
ENST00000522977.5
CDS-3UTR CCA 90 bp GGATTATTGGCCTCATTAAAAGATAATTTGCAGCTGGCATGGGTTTGTGTTGGCAAATCCCCACGGGTCTaGCAGAGGCTTTGGCCGGGT +
Preference number: 4 (lower is better)
Translates to: GLLASLKDNLQLAWVCVGKSPRV*QRLWPG
Trigger: ACCCGGCCAAAGCCTCTGCCAGACCCGTGGGGATTT...GCCAACACAAACCCATGCCAGCTGCAAATTATCTTTTAATGAGGCCAATAATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480005.1
CDS-3UTR CCA 90 bp TGCGTGTGGCTCAGTTTCAATCCTGAAGGTTTTTCCTCTTGTCCGGGGAACCTTCCCTCTCGCTTCTCATaGATTCACCTGGAGATATGG +
Preference number: 4 (lower is better)
Translates to: CVWLSFNPEGFSSCPGNLPSRFS*IHLEIW
Trigger: CCATATCTCCAGGTGAATCCATGAGAAGCGAGAGGG...AAGGTTCCCCGGACAAGAGGAAAAACCTTCAGGATTGAAACTGAGCCACACGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR CCA 90 bp ACCACAGCATTCTTCTATCTCAGATTCCATCTTTACACAGTACTTCGGGCAGCCCAGGAGCTTTGCAGATaGAGCTCGCATCGAGGGAGT +
Preference number: 4 (lower is better)
Translates to: TTAFFYLRFHLYTVLRAAQELCR*SSHRGS
Trigger: ACTCCCTCGATGCGAGCTCCATCTGCAAAGCTCCTG...GGCTGCCCGAAGTACTGTGTAAAGATGGAATCTGAGATAGAAGAATGCTGTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460144.5
CDS-3UTR TCA 90 bp GTTTTTCCTCTTGTCCGGGGAACCTTGGCCAACACAGGGCACTTGAAGAGGGTCAATCACTTTCAGATATaGGGATCTGGTGTTCAGAGT +
Preference number: 4 (lower is better)
Translates to: VFPLVRGTLANTGHLKRVNHFQI*GSGVQS
Trigger: ACTCTGAACACCAGATCCTCATATCTGAAAGTGATT...GACCCTCTTCAAGTGCCCTGTGTTGGCCAAGGTTCCCCGGACAAGAGGAAAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR TCA 90 bp CCAGGCCTCTCAGCCACCCTCTCGCTTCTCATGGATTCACCTGGAGATATGGAAAATCACTTTCAGATATaGGGATCTGGTGTTCAGAGT +
Preference number: 4 (lower is better)
Translates to: PGLSATLSLLMDSPGDMENHFQI*GSGVQS
Trigger: ACTCTGAACACCAGATCCTCATATCTGAAAGTGATT...TTCCATATCTCCAGGTGAATCCATGAGAAGCGAGAGGGTGGCTGAGAGGCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR GCA 90 bp AGCAAGGGATTATTGATTCCACTAGACTATGCCACTTCAGAAAACATTAGCAGTAGCTCCAGGGGCTGGTaGGTGTACAGGTCCGACTCG +
Preference number: 4 (lower is better)
Translates to: SKGLLIPLDYATSENISSSSRGW*VYRSDS
Trigger: CGAGTCGGACCTGTACACGCACCAGCCCCTGGAGCT...ACTGCTAATGTTTTCTGAAGTGGCATAGTCTAGTGGAATCAATAATCCCTTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
ENST00000522977.5
CDS-3UTR GCA 90 bp TTCTGGACTCCAACATCTCTATTGAATGAGACTTTTGAACAGTCCTCTGGGATACGCCGCAGGAAGCACTaGCTGTCAGTGGTAGAGAGG +
Preference number: 4 (lower is better)
Translates to: FWTPTSLLNETFEQSSGIRRRKH*LSVVER
Trigger: CCTCTCTACCACTGACAGGCAGTGCTTCCTGCGGCG...TATCCCAGAGGACTGTTCAAAAGTCTCATTCAATAGAGATGTTGGAGTCCAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR GCA 90 bp TCACACATAGCAGTTGAGTCTGAGACCTGTAATGTGGCCAAACACTTCTTTGTACCAGGGCAGGAGCTTTaGAGATGGAGCTCGCATCGA +
Preference number: 4 (lower is better)
Translates to: SHIAVESETCNVAKHFFVPGQEL*RWSSHR
Trigger: TCGATGCGAGCTCCATCTGCAAAGCTCCTGCCCTGG...TACAAAGAAGTGTTTGGCCACATTACAGGTCTCAGACTCAACTGCTATGTGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460144.5
CDS-3UTR CCA 90 bp GTTTCAATCCTGAAGGTTTTTCCTCTTGTCCGGGGAACCTTGGCCAACACAGGGTTCTTCTGGCTGGACTaGATACCTTGGAAGGAATCA +
Preference number: 4 (lower is better)
Translates to: VSILKVFPLVRGTLANTGFFWLD*IPWKES
Trigger: TGATTCCTTCCAAGGTATCCAGTCCAGCCAGAAGAA...CCCTGTGTTGGCCAAGGTTCCCCGGACAAGAGGAAAAACCTTCAGGATTGAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
ENST00000522977.5
CDS-3UTR CCA 90 bp TCCAACATATCAGAGTCTTCTTTTCAATGGTTGCCCCCAGAGACACACTCTCACGGCTCTTCTTCTGGCTaGACTGGATACCTTGGAAGG +
Preference number: 4 (lower is better)
Translates to: SNISESSFQWLPPETHSHGSSSG*TGYLGR
Trigger: CCTTCCAAGGTATCCAGTCCAGCCAGAAGAAGAGCC...GTGAGAGTGTGTCTCTGGGGGCAACCATTGAAAAGAAGACTCTGATATGTTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR CCA 90 bp TTGTACTTGACACACTTCTTAACCGGTGGGCAGGGGATCTTGAACTTACTCATGGGTGCTGAGAGCTTTTaGCTCTTCTTCTGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: LYLTHFLTGGQGILNLLMGAESF*LFFWLD
Trigger: GTCCAGCCAGAAGAAGAGCCAAAAGCTCTCAGCACC...CATGAGTAAGTTCAAGATCCCCTGCCCACCGGTTAAGAAGTGTGTCAAGTACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480005.1
CDS-3UTR CCA 90 bp AGCAAGGGATTATTGATTCCACTAGACTATGCCACTTCAGAAAACATTAGCAGTAGCAGCTCCAGGGGCTaGTGCGTGTACAGGTCCGAC +
Preference number: 4 (lower is better)
Translates to: SKGLLIPLDYATSENISSSSSRG*CVYRSD
Trigger: GTCGGACCTGTACACGCACCAGCCCCTGGAGCTGCT...ACTGCTAATGTTTTCTGAAGTGGCATAGTCTAGTGGAATCAATAATCCCTTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
ENST00000522977.5
CDS-3UTR CCA 90 bp TTCTGGACTCCAACATCTCTATTGAATGAGACTTTTGAACAGTCCTCTGGGATAAAATCCCCACGGGTCTaGCAGAGGCTTTGGCCGGGT +
Preference number: 4 (lower is better)
Translates to: FWTPTSLLNETFEQSSGIKSPRV*QRLWPG
Trigger: ACCCGGCCAAAGCCTCTGCCAGACCCGTGGGGATTT...TATCCCAGAGGACTGTTCAAAAGTCTCATTCAATAGAGATGTTGGAGTCCAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR CCA 90 bp TGCGTGTGGCTCAGTTTCAATCCTGAAGGTTTTTCCTCTTGTCCGGGGAACCTTCATCGAGGGAGTTTCTaGATCCTTCGTGATTCCAGT +
Preference number: 4 (lower is better)
Translates to: CVWLSFNPEGFSSCPGNLHRGSF*ILRDSS
Trigger: ACTGGAATCACGAAGGATCCAGAAACTCCCTCGATG...AAGGTTCCCCGGACAAGAGGAAAAACCTTCAGGATTGAAACTGAGCCACACGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460144.5
CDS-3UTR TCA 90 bp CAATGGTTGAAGAGCAGAGATAGCAAGGTGGAATCCCAGAGGCCCAGGCCTCTCATTCCCACACAGATTTaGTGTTTTGGGTTCAGAAAT +
Preference number: 4 (lower is better)
Translates to: QWLKSRDSKVESQRPRPLIPTQI*CFGFRN
Trigger: ATTTCTGAACCCAAAACATCAAATCTGTGTGGGAAT...GAGAGGCCTGGGCCTCTGGGATTCCACCTTGCTATCTCTGCTCTTCAACCATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR TCA 90 bp GTTTTTCCTCTTGTCCGGGGAACCTTGGCCAACACAGGGCACTTGAAGAGGGTCATTCCCACACAGATTTaGTGTTTTGGGTTCAGAAAT +
Preference number: 4 (lower is better)
Translates to: VFPLVRGTLANTGHLKRVIPTQI*CFGFRN
Trigger: ATTTCTGAACCCAAAACATCAAATCTGTGTGGGAAT...GACCCTCTTCAAGTGCCCTGTGTTGGCCAAGGTTCCCCGGACAAGAGGAAAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR TCA 90 bp AAAACTTCCCCAAGTCAGTTGCTAGAGAGTAGGCAAAGCAGGGAGTCCACTGGAGCTCAGTTTCAATCCTaGAGGTTTTTCCTCTTGTCC +
Preference number: 4 (lower is better)
Translates to: KTSPSQLLESRQSRESTGAQFQS*RFFLLS
Trigger: GGACAAGAGGAAAAACCTTCAGGATTGAAACTGAGC...TCCAGTGGACTCCCTGCTTTGCCTACTCTCTAGCAACTGACTTGGGGAAGTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR TCA 90 bp TGCGTGTGGCTCAGTTTCAATCCTGAAGGTTTTTCCTCTTGTCCGGGGAACCTTGCTCAGTTTCAATCCTaGAGGTTTTTCCTCTTGTCC +
Preference number: 4 (lower is better)
Translates to: CVWLSFNPEGFSSCPGNLAQFQS*RFFLLS
Trigger: GGACAAGAGGAAAAACCTTCAGGATTGAAACTGAGC...AAGGTTCCCCGGACAAGAGGAAAAACCTTCAGGATTGAAACTGAGCCACACGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
ENST00000522977.5
CDS-3UTR TCA 90 bp GCATTCTTCTATCTCAGATTCCATCTTTACACAGTACTTCGGGCAGCCTCTACCTCCCAGGGTAATCAATaGGTGAGGGAGGATAATGGG +
Preference number: 4 (lower is better)
Translates to: AFFYLRFHLYTVLRAASTSQGNQ*VREDNG
Trigger: CCCATTATCCTCCCTCACTCATTGATTACCCTGGGA...GGTAGAGGCTGCCCGAAGTACTGTGTAAAGATGGAATCTGAGATAGAAGAATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR TCA 90 bp CTCTGTTACGACCAGCATAGGTTACTGGTTTGCTCCCTAACTTTGTTCTGGACTTCCCAGGGTAATCAATaGGTGAGGGAGGATAATGGG +
Preference number: 4 (lower is better)
Translates to: LCYDQHRLLVCSLTLFWTSQGNQ*VREDNG
Trigger: CCCATTATCCTCCCTCACTCATTGATTACCCTGGGA...AGTCCAGAACAAAGTTAGGGAGCAAACCAGTAACCTATGCTGGTCGTAACAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR TCA 90 bp GGTGCGTGTGGCTCAGTTTCAATCCTGAAGGTTTTTCCTCTTGTCCGGGGAACCTGTACCTTGTCAAGGTaGAGTAAATGCAGTAATGGA +
Preference number: 4 (lower is better)
Translates to: GACGSVSILKVFPLVRGTCTLSR*SKCSNG
Trigger: TCCATTACTGCATTTACTTCACCTTGACAAGGTACA...GGTTCCCCGGACAAGAGGAAAAACCTTCAGGATTGAAACTGAGCCACACGCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
ENST00000522977.5
CDS-3UTR TCA 90 bp GTTTTTCCTCTTGTCCGGGGAACCTTGGCCAACACAGGGCACTTGAAGAGGGTCATAGTGCTTTGTCCTTaGAAATTGTACCTTGTCAAG +
Preference number: 4 (lower is better)
Translates to: VFPLVRGTLANTGHLKRVIVLCP*KLYLVK
Trigger: CTTGACAAGGTACAATTTTCAAGGACAAAGCACTAT...GACCCTCTTCAAGTGCCCTGTGTTGGCCAAGGTTCCCCGGACAAGAGGAAAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
ENST00000522977.5
CDS-3UTR GCA 90 bp GTTTGCTCCCTAACTTTGTTCTGGACTCCAACATCTCTATTGAATGAGACTTTTCAGCTCCCTTCTCTGTaGCCATGGCTGTCGCCTCCA +
Preference number: 4 (lower is better)
Translates to: VCSLTLFWTPTSLLNETFQLPSL*PWLSPP
Trigger: TGGAGGCGACAGCCATGGGCACAGAGAAGGGAGCTG...AAAAGTCTCATTCAATAGAGATGTTGGAGTCCAGAACAAAGTTAGGGAGCAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR GCA 90 bp GGCCTCCATTTCCCCCTCTGCAGATTGGGAATAATTGTGCTTTCTTCCACAGGGGGGGCAGTTTTATATTaGCTTCGAGGGACATTTCTT +
Preference number: 4 (lower is better)
Translates to: GLHFPLCRLGIIVLSSTGGAVLY*LRGTFL
Trigger: AAGAAATGTCCCTCGAAGGCAATATAAAACTGCCCC...CCCTGTGGAAGAAAGCACAATTATTCCCAATCTGCAGAGGGGGAAATGGAGGCC
48% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR GCA 90 bp GTGTGGCTCAGTTTCAATCCTGAAGGTTTTTCCTCTTGTCCGGGGAACCTTGGCGGGGCAGTTTTATATTaGCTTCGAGGGACATTTCTT +
Preference number: 4 (lower is better)
Translates to: VWLSFNPEGFSSCPGNLGGAVLY*LRGTFL
Trigger: AAGAAATGTCCCTCGAAGGCAATATAAAACTGCCCC...GCCAAGGTTCCCCGGACAAGAGGAAAAACCTTCAGGATTGAAACTGAGCCACAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
ENST00000522977.5
CDS-3UTR GCA 90 bp TGCGTGTGGCTCAGTTTCAATCCTGAAGGTTTTTCCTCTTGTCCGGGGAACCTTCTCCATTTCCCCCTCTaGAGATTGGGAATAATTGTG +
Preference number: 4 (lower is better)
Translates to: CVWLSFNPEGFSSCPGNLLHFPL*RLGIIV
Trigger: CACAATTATTCCCAATCTGCAGAGGGGGAAATGGAG...AAGGTTCCCCGGACAAGAGGAAAAACCTTCAGGATTGAAACTGAGCCACACGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR CCA 90 bp ACCACAGCATTCTTCTATCTCAGATTCCATCTTTACACAGTACTTCGGGCAGCCAAGCAGGGAGTCCACTaGAGAGAAGTTAAGGACCTG +
Preference number: 4 (lower is better)
Translates to: TTAFFYLRFHLYTVLRAAKQGVH*REVKDL
Trigger: CAGGTCCTTAACTTCTCTCCAGTGGACTCCCTGCTT...GGCTGCCCGAAGTACTGTGTAAAGATGGAATCTGAGATAGAAGAATGCTGTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR CCA 90 bp CCAGGCCTCTCAGCCACCCTCTCGCTTCTCATGGATTCACCTGGAGATATGGAATCAGATATGAGGATCTaGTGTTCAGAGTCTAAAACA +
Preference number: 4 (lower is better)
Translates to: PGLSATLSLLMDSPGDMESDMRI*CSESKT
Trigger: TGTTTTAGACTCTGAACACCAGATCCTCATATCTGA...TTCCATATCTCCAGGTGAATCCATGAGAAGCGAGAGGGTGGCTGAGAGGCCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR TCA 90 bp AGTACTTCGGGCAGCCTCTACCCATCAATCATGTTTAGTGTTTGGGATGAAAATCCAACACAGGGCACTTaGAGAGGGTCACCTTTAGTC +
Preference number: 4 (lower is better)
Translates to: STSGSLYPSIMFSVWDENPTQGT*RGSPLV
Trigger: GACTAAAGGTGACCCTCTTCAAGTGCCCTGTGTTGG...ATTTTCATCCCAAACACTAAACATGATTGATGGGTAGAGGCTGCCCGAAGTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR TCA 90 bp GGCCTCCATTTCCCCCTCTGCAGATTGGGAATAATTGTGCTTTCTTCCACAGGGTGTACCTTGTCAAGGTaGAGTAAATGCAGTAATGGA +
Preference number: 4 (lower is better)
Translates to: GLHFPLCRLGIIVLSSTGCTLSR*SKCSNG
Trigger: TCCATTACTGCATTTACTTCACCTTGACAAGGTACA...CCCTGTGGAAGAAAGCACAATTATTCCCAATCTGCAGAGGGGGAAATGGAGGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR TCA 90 bp GTTTCAATCCTGAAGGTTTTTCCTCTTGTCCGGGGAACCTTGGCCAACACAGGGAGTTTAGGCCACAGATaGCAAATATACAAGGCATGT +
Preference number: 4 (lower is better)
Translates to: VSILKVFPLVRGTLANTGSLGHR*QIYKAC
Trigger: ACATGCCTTGTATATTTGTCATCTGTGGCCTAAACT...CCCTGTGTTGGCCAAGGTTCCCCGGACAAGAGGAAAAACCTTCAGGATTGAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR TCA 90 bp GGTGCGTGTGGCTCAGTTTCAATCCTGAAGGTTTTTCCTCTTGTCCGGGGAACCCTCCAACATCTCTATTaGATGAGACTTTTGAACAGT +
Preference number: 4 (lower is better)
Translates to: GACGSVSILKVFPLVRGTLQHLY*MRLLNS
Trigger: ACTGTTCAAAAGTCTCATTCAATAGAGATGTTGGAG...GGTTCCCCGGACAAGAGGAAAAACCTTCAGGATTGAAACTGAGCCACACGCACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR GCA 90 bp ACCACAGCATTCTTCTATCTCAGATTCCATCTTTACACAGTACTTCGGGCAGCCCTTCTTTTCAATGGTTaGCCCCAGAGACACACTCTC +
Preference number: 4 (lower is better)
Translates to: TTAFFYLRFHLYTVLRAALLFNG*PQRHTL
Trigger: GAGAGTGTGTCTCTGGGGGCAACCATTGAAAAGAAG...GGCTGCCCGAAGTACTGTGTAAAGATGGAATCTGAGATAGAAGAATGCTGTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR GCA 90 bp ACCTCCCAAATGACTTCTCCAAGCCTAAAGAGTGGCGTTAATGAAGTGGAAACCGATATTTCTGACGCCTaGATGCCTATGGGAGGTTCT +
Preference number: 4 (lower is better)
Translates to: TSQMTSPSLKSGVNEVETDISDA*MPMGGS
Trigger: AGAACCTCCCATAGGCATGCAGGCGTCAGAAATATC...GGTTTCCACTTCATTAACGCCACTCTTTAGGCTTGGAGAAGTCATTTGGGAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480005.1
CDS-3UTR CCA 90 bp TCACACATAGCAGTTGAGTCTGAGACCTGTAATGTGGCCAAACACTTCTTTGTAGGTGCTGAGAGCTTTTaGCTCTTCTTCTGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: SHIAVESETCNVAKHFFVGAESF*LFFWLD
Trigger: GTCCAGCCAGAAGAAGAGCCAAAAGCTCTCAGCACC...TACAAAGAAGTGTTTGGCCACATTACAGGTCTCAGACTCAACTGCTATGTGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR CCA 90 bp GATCTTGAACTTACTCATGAGATATTTCTGACGCCTGCATGCCTATGGGAGGTTCGATCACCACATTCTTaGTCAAGAGGTGCTGAGAGC +
Preference number: 4 (lower is better)
Translates to: DLELTHEIFLTPACLWEVRSPHS*SRGAES
Trigger: GCTCTCAGCACCTCTTGACCAAGAATGTGGTGATCG...AACCTCCCATAGGCATGCAGGCGTCAGAAATATCTCATGAGTAAGTTCAAGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480005.1
CDS-3UTR CCA 90 bp GTGTGGCTCAGTTTCAATCCTGAAGGTTTTTCCTCTTGTCCGGGGAACCTTGGCTTGGCATCTATTAAGTaGATAGGGCCACCTAATAGA +
Preference number: 4 (lower is better)
Translates to: VWLSFNPEGFSSCPGNLGLASIK*IGPPNR
Trigger: TCTATTAGGTGGCCCTATCCACTTAATAGATGCCAA...GCCAAGGTTCCCCGGACAAGAGGAAAAACCTTCAGGATTGAAACTGAGCCACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR CCA 90 bp GTGTGGCTCAGTTTCAATCCTGAAGGTTTTTCCTCTTGTCCGGGGAACCTTGGCTCTCATGGATTCACCTaGAGATATGGAAATAGGGAA +
Preference number: 4 (lower is better)
Translates to: VWLSFNPEGFSSCPGNLGSHGFT*RYGNRE
Trigger: TTCCCTATTTCCATATCTCCAGGTGAATCCATGAGA...GCCAAGGTTCCCCGGACAAGAGGAAAAACCTTCAGGATTGAAACTGAGCCACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR CCA 90 bp ACCTCCCAAATGACTTCTCCAAGCCTAAAGAGTGGCGTTAATGAAGTGGAAACCACACTTCTTAACCGGTaGGCAGGGGATCTTGAACTT +
Preference number: 4 (lower is better)
Translates to: TSQMTSPSLKSGVNEVETTLLNR*AGDLEL
Trigger: AAGTTCAAGATCCCCTGCCCACCGGTTAAGAAGTGT...GGTTTCCACTTCATTAACGCCACTCTTTAGGCTTGGAGAAGTCATTTGGGAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480005.1
CDS-3UTR TCA 90 bp GTGTGGCTCAGTTTCAATCCTGAAGGTTTTTCCTCTTGTCCGGGGAACCTTGGCATTCCCACACAGATTTaGTGTTTTGGGTTCAGAAAT +
Preference number: 4 (lower is better)
Translates to: VWLSFNPEGFSSCPGNLGIPTQI*CFGFRN
Trigger: ATTTCTGAACCCAAAACATCAAATCTGTGTGGGAAT...GCCAAGGTTCCCCGGACAAGAGGAAAAACCTTCAGGATTGAAACTGAGCCACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR TCA 90 bp TCCAACATATCAGAGTCTTCTTTTCAATGGTTGCCCCCAGAGACACACTCTCACGCTCAGTTTCAATCCTaGAGGTTTTTCCTCTTGTCC +
Preference number: 4 (lower is better)
Translates to: SNISESSFQWLPPETHSHAQFQS*RFFLLS
Trigger: GGACAAGAGGAAAAACCTTCAGGATTGAAACTGAGC...GTGAGAGTGTGTCTCTGGGGGCAACCATTGAAAAGAAGACTCTGATATGTTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR TCA 90 bp GGCCTCCATTTCCCCCTCTGCAGATTGGGAATAATTGTGCTTTCTTCCACAGGGTCCTTCTCTATGTTCTaGACTATTTTGTGTGAAGGA +
Preference number: 4 (lower is better)
Translates to: GLHFPLCRLGIIVLSSTGSFSMF*TILCEG
Trigger: TCCTTCACACAAAATAGTTCAGAACATAGAGAAGGA...CCCTGTGGAAGAAAGCACAATTATTCCCAATCTGCAGAGGGGGAAATGGAGGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR GCA 90 bp GTGTGGCTCAGTTTCAATCCTGAAGGTTTTTCCTCTTGTCCGGGGAACCTTGGCCATTGTGTTTACAAGTaGCTCAAAGTCCATTTACAC +
Preference number: 4 (lower is better)
Translates to: VWLSFNPEGFSSCPGNLGHCVYK*LKVHLH
Trigger: GTGTAAATGGACTTTGAGGCACTTGTAAACACAATG...GCCAAGGTTCCCCGGACAAGAGGAAAAACCTTCAGGATTGAAACTGAGCCACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
ENST00000522977.5
CDS-3UTR CCA 90 bp GCATTCTTCTATCTCAGATTCCATCTTTACACAGTACTTCGGGCAGCCTCTACCTTCTTCTGGCTGGACTaGATACCTTGGAAGGAATCA +
Preference number: 4 (lower is better)
Translates to: AFFYLRFHLYTVLRAASTFFWLD*IPWKES
Trigger: TGATTCCTTCCAAGGTATCCAGTCCAGCCAGAAGAA...GGTAGAGGCTGCCCGAAGTACTGTGTAAAGATGGAATCTGAGATAGAAGAATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR CCA 90 bp TTCTGGACTCCAACATCTCTATTGAATGAGACTTTTGAACAGTCCTCTGGGATAGGTGCTGAGAGCTTTTaGCTCTTCTTCTGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: FWTPTSLLNETFEQSSGIGAESF*LFFWLD
Trigger: GTCCAGCCAGAAGAAGAGCCAAAAGCTCTCAGCACC...TATCCCAGAGGACTGTTCAAAAGTCTCATTCAATAGAGATGTTGGAGTCCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR CCA 90 bp TCACACATAGCAGTTGAGTCTGAGACCTGTAATGTGGCCAAACACTTCTTTGTACCCTCTCGCTTCTCATaGATTCACCTGGAGATATGG +
Preference number: 4 (lower is better)
Translates to: SHIAVESETCNVAKHFFVPSRFS*IHLEIW
Trigger: CCATATCTCCAGGTGAATCCATGAGAAGCGAGAGGG...TACAAAGAAGTGTTTGGCCACATTACAGGTCTCAGACTCAACTGCTATGTGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR CCA 90 bp TCCAACATATCAGAGTCTTCTTTTCAATGGTTGCCCCCAGAGACACACTCTCACCAAGTAGAGTATTCTTaGTCAAGAGGTGCTGAGAGC +
Preference number: 4 (lower is better)
Translates to: SNISESSFQWLPPETHSHQVEYS*SRGAES
Trigger: GCTCTCAGCACCTCTTGACCAAGAATACTCTACTTG...GTGAGAGTGTGTCTCTGGGGGCAACCATTGAAAAGAAGACTCTGATATGTTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450307.7
CDS-3UTR CCA 90 bp TGCCTATGGGAGGTTCTGAATATGGCTCGTGATTACATTCATCTAATTAACCAAGGCATGGGTTTGTGTTaGCCTCTCGAGGGTCTGTCA +
Preference number: 4 (lower is better)
Translates to: CLWEVLNMARDYIHLINQGMGLC*PLEGLS
Trigger: TGACAGACCCTCGAGAGGCCAACACAAACCCATGCC...TTGGTTAATTAGATGAATGTAATCACGAGCCATATTCAGAACCTCCCATAGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480005.1
CDS-3UTR CCA 90 bp GACCCAGGATTATTGGCCTCATTAAAAGATAATTTGCAGCTGGCATGGGTTTGTAATTTGCAGCTGGCATaGGTTTGTGTTGGCCTCTCG +
Preference number: 4 (lower is better)
Translates to: DPGLLASLKDNLQLAWVCNLQLA*VCVGLS
Trigger: CGAGAGGCCAACACAAACCCATGCCAGCTGCAAATT...ACAAACCCATGCCAGCTGCAAATTATCTTTTAATGAGGCCAATAATCCTGGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480005.1
CDS-3UTR TCA 90 bp AAGATAATTTGCAGCTGGCATGGGTTTGTGTTGGCCTCTCGAGGGTCTGTCAACATTCCCACACAGATTTaGTGTTTTGGGTTCAGAAAT +
Preference number: 4 (lower is better)
Translates to: KIICSWHGFVLASRGSVNIPTQI*CFGFRN
Trigger: ATTTCTGAACCCAAAACATCAAATCTGTGTGGGAAT...GTTGACAGACCCTCGAGAGGCCAACACAAACCCATGCCAGCTGCAAATTATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480005.1
CDS-3UTR TCA 90 bp CTTAAAAACAAACGTAATTGTAGGATCCTCTGTTACGACCAGCATAGGTTACTGTGGTCCTGTAATCTCTaGAGGCCTCCATTTCCCCCT +
Preference number: 4 (lower is better)
Translates to: LKNKRNCRILCYDQHRLLWSCNL*RPPFPP
Trigger: AGGGGGAAATGGAGGCCTTCAGAGATTACAGGACCA...CAGTAACCTATGCTGGTCGTAACAGAGGATCCTACAATTACGTTTGTTTTTAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR GCA 90 bp AAAACTTCCCCAAGTCAGTTGCTAGAGAGTAGGCAAAGCAGGGAGTCCACTGGACATTGTGTTTACAAGTaGCTCAAAGTCCATTTACAC +
Preference number: 4 (lower is better)
Translates to: KTSPSQLLESRQSRESTGHCVYK*LKVHLH
Trigger: GTGTAAATGGACTTTGAGGCACTTGTAAACACAATG...TCCAGTGGACTCCCTGCTTTGCCTACTCTCTAGCAACTGACTTGGGGAAGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR CCA 90 bp GATCTTGAACTTACTCATGAGATATTTCTGACGCCTGCATGCCTATGGGAGGTTTTCTTCTGGCTGGACTaGATACCTTGGAAGGAATCA +
Preference number: 4 (lower is better)
Translates to: DLELTHEIFLTPACLWEVFFWLD*IPWKES
Trigger: TGATTCCTTCCAAGGTATCCAGTCCAGCCAGAAGAA...AACCTCCCATAGGCATGCAGGCGTCAGAAATATCTCATGAGTAAGTTCAAGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480005.1
CDS-3UTR CCA 90 bp GTTTGCTCCCTAACTTTGTTCTGGACTCCAACATCTCTATTGAATGAGACTTTTGGCTCTTCTTCTGGCTaGACTGGATACCTTGGAAGG +
Preference number: 4 (lower is better)
Translates to: VCSLTLFWTPTSLLNETFGSSSG*TGYLGR
Trigger: CCTTCCAAGGTATCCAGTCCAGCCAGAAGAAGAGCC...AAAAGTCTCATTCAATAGAGATGTTGGAGTCCAGAACAAAGTTAGGGAGCAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR CCA 90 bp GACCCAGGATTATTGGCCTCATTAAAAGATAATTTGCAGCTGGCATGGGTTTGTTTTTGGCTCTTCTTCTaGCTGGACTGGATACCTTGG +
Preference number: 4 (lower is better)
Translates to: DPGLLASLKDNLQLAWVCFWLFF*LDWIPW
Trigger: CCAAGGTATCCAGTCCAGCCAGAAGAAGAGCCAAAA...ACAAACCCATGCCAGCTGCAAATTATCTTTTAATGAGGCCAATAATCCTGGGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480005.1
CDS-3UTR CCA 90 bp AGCAAGGGATTATTGATTCCACTAGACTATGCCACTTCAGAAAACATTAGCAGTGGTGCTGAGAGCTTTTaGCTCTTCTTCTGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: SKGLLIPLDYATSENISSGAESF*LFFWLD
Trigger: GTCCAGCCAGAAGAAGAGCCAAAAGCTCTCAGCACC...ACTGCTAATGTTTTCTGAAGTGGCATAGTCTAGTGGAATCAATAATCCCTTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
ENST00000522977.5
CDS-3UTR CCA 90 bp ACAAACGTAATTGTAGGATCCTCTGTTACGACCAGCATAGGTTACTGGTTTGCTGAGTCTTCTTTTCAATaGTTGCCCCCAGAGACACAC +
Preference number: 4 (lower is better)
Translates to: TNVIVGSSVTTSIGYWFAESSFQ*LPPETH
Trigger: GTGTGTCTCTGGGGGCAACCATTGAAAAGAAGACTC...AGCAAACCAGTAACCTATGCTGGTCGTAACAGAGGATCCTACAATTACGTTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR TCA 90 bp ACCACAGCATTCTTCTATCTCAGATTCCATCTTTACACAGTACTTCGGGCAGCCCTGAACTATTTTGTGTaGAGGAGTAGCTCTAACACA +
Preference number: 4 (lower is better)
Translates to: TTAFFYLRFHLYTVLRAALNYFV*RSSSNT
Trigger: TGTGTTAGAGCTACTCCTTCACACAAAATAGTTCAG...GGCTGCCCGAAGTACTGTGTAAAGATGGAATCTGAGATAGAAGAATGCTGTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR TCA 90 bp CCATTGTGTTTACAAGTGCCTCAAAGTCCATTTACACTAGAAAATCACACACTTTTGAACCCAGGAGTTTaGGACCAGTCTGGGCAACAC +
Preference number: 4 (lower is better)
Translates to: PLCLQVPQSPFTLENHTLLNPGV*DQSGQH
Trigger: GTGTTGCCCAGACTGGTCTCAAACTCCTGGGTTCAA...AAGTGTGTGATTTTCTAGTGTAAATGGACTTTGAGGCACTTGTAAACACAATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR GCA 90 bp CTCTGTTACGACCAGCATAGGTTACTGGTTTGCTCCCTAACTTTGTTCTGGACTCAGAGATTTTCCATATaGTCGATTCCCACACAGATT +
Preference number: 4 (lower is better)
Translates to: LCYDQHRLLVCSLTLFWTQRFSI*SIPTQI
Trigger: AATCTGTGTGGGAATCGAGCATATGGAAAATCTCTG...AGTCCAGAACAAAGTTAGGGAGCAAACCAGTAACCTATGCTGGTCGTAACAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR GCA 90 bp TTGTTCCAACATATCAGAGTCTTCTTTTCAATGGTTGCCCCCAGAGACACACTCCATAGGTTACTGGTTTaGTCCCTAACTTTGTTCTGG +
Preference number: 4 (lower is better)
Translates to: LFQHIRVFFSMVAPRDTLHRLLV*SLTLFW
Trigger: CCAGAACAAAGTTAGGGAGCAAACCAGTAACCTATG...GAGTGTGTCTCTGGGGGCAACCATTGAAAAGAAGACTCTGATATGTTGGAACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR CCA 90 bp CCATTGTGTTTACAAGTGCCTCAAAGTCCATTTACACTAGAAAATCACACACTTGGTGCTGAGAGCTTTTaGCTCTTCTTCTGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: PLCLQVPQSPFTLENHTLGAESF*LFFWLD
Trigger: GTCCAGCCAGAAGAAGAGCCAAAAGCTCTCAGCACC...AAGTGTGTGATTTTCTAGTGTAAATGGACTTTGAGGCACTTGTAAACACAATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
ENST00000522977.5
CDS-3UTR CCA 90 bp AGCAAGGGATTATTGATTCCACTAGACTATGCCACTTCAGAAAACATTAGCAGTAAGCAGGGAGTCCACTaGAGAGAAGTTAAGGACCTG +
Preference number: 4 (lower is better)
Translates to: SKGLLIPLDYATSENISSKQGVH*REVKDL
Trigger: CAGGTCCTTAACTTCTCTCCAGTGGACTCCCTGCTT...ACTGCTAATGTTTTCTGAAGTGGCATAGTCTAGTGGAATCAATAATCCCTTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
3UTR CAA 72 bp TACGACCAGCATAGGTTACTGGTTTGCTCCCTAACTTaGTTCTGGACTCCAACATCTCTATTGAATGAGACT +
Preference number: 4 (lower is better)
Translates to: YDQHRLLVCSLT*FWTPTSLLNET
Trigger: AGTCTCATTCAATAGAGATGTTGGAGTCCAGAACAAAGTTAGGGAGCAAACCAGTAACCTATGCTGGTCGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR TCA 90 bp CCATTGTGTTTACAAGTGCCTCAAAGTCCATTTACACTAGAAAATCACACACTTTCCCAGGGTAATCAATaGGTGAGGGAGGATAATGGG +
Preference number: 4 (lower is better)
Translates to: PLCLQVPQSPFTLENHTLSQGNQ*VREDNG
Trigger: CCCATTATCCTCCCTCACTCATTGATTACCCTGGGA...AAGTGTGTGATTTTCTAGTGTAAATGGACTTTGAGGCACTTGTAAACACAATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
ENST00000522977.5
CDS-3UTR TCA 90 bp AAATCACTTTCAGATATGAGGATCTGGTGTTCAGAGTCTAAAACAATGGTTGAATGGTCCTGTAATCTCTaGAGGCCTCCATTTCCCCCT +
Preference number: 4 (lower is better)
Translates to: KSLSDMRIWCSESKTMVEWSCNL*RPPFPP
Trigger: AGGGGGAAATGGAGGCCTTCAGAGATTACAGGACCA...TTCAACCATTGTTTTAGACTCTGAACACCAGATCCTCATATCTGAAAGTGATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR TCA 90 bp CTCTGTTACGACCAGCATAGGTTACTGGTTTGCTCCCTAACTTTGTTCTGGACTTCCTTCTCTATGTTCTaGACTATTTTGTGTGAAGGA +
Preference number: 4 (lower is better)
Translates to: LCYDQHRLLVCSLTLFWTSFSMF*TILCEG
Trigger: TCCTTCACACAAAATAGTTCAGAACATAGAGAAGGA...AGTCCAGAACAAAGTTAGGGAGCAAACCAGTAACCTATGCTGGTCGTAACAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR TCA 90 bp GCATTCTTCTATCTCAGATTCCATCTTTACACAGTACTTCGGGCAGCCTCTACCGCAAGAATTACTAATTaGCCACAGCATTCTTCTATC +
Preference number: 4 (lower is better)
Translates to: AFFYLRFHLYTVLRAASTARITN*PQHSSI
Trigger: GATAGAAGAATGCTGTGGTCAATTAGTAATTCTTGC...GGTAGAGGCTGCCCGAAGTACTGTGTAAAGATGGAATCTGAGATAGAAGAATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR TCA 90 bp TTGTTCCAACATATCAGAGTCTTCTTTTCAATGGTTGCCCCCAGAGACACACTCAATCACTTTCAGATATaGGGATCTGGTGTTCAGAGT +
Preference number: 4 (lower is better)
Translates to: LFQHIRVFFSMVAPRDTLNHFQI*GSGVQS
Trigger: ACTCTGAACACCAGATCCTCATATCTGAAAGTGATT...GAGTGTGTCTCTGGGGGCAACCATTGAAAAGAAGACTCTGATATGTTGGAACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR TCA 90 bp ACCACAGCATTCTTCTATCTCAGATTCCATCTTTACACAGTACTTCGGGCAGCCCTCCAACATCTCTATTaGATGAGACTTTTGAACAGT +
Preference number: 4 (lower is better)
Translates to: TTAFFYLRFHLYTVLRAALQHLY*MRLLNS
Trigger: ACTGTTCAAAAGTCTCATTCAATAGAGATGTTGGAG...GGCTGCCCGAAGTACTGTGTAAAGATGGAATCTGAGATAGAAGAATGCTGTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR TCA 90 bp GCATTCTTCTATCTCAGATTCCATCTTTACACAGTACTTCGGGCAGCCTCTACCCTCCAACATCTCTATTaGATGAGACTTTTGAACAGT +
Preference number: 4 (lower is better)
Translates to: AFFYLRFHLYTVLRAASTLQHLY*MRLLNS
Trigger: ACTGTTCAAAAGTCTCATTCAATAGAGATGTTGGAG...GGTAGAGGCTGCCCGAAGTACTGTGTAAAGATGGAATCTGAGATAGAAGAATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR GCA 90 bp TTCTGGACTCCAACATCTCTATTGAATGAGACTTTTGAACAGTCCTCTGGGATACTCCATTTCCCCCTCTaGAGATTGGGAATAATTGTG +
Preference number: 4 (lower is better)
Translates to: FWTPTSLLNETFEQSSGILHFPL*RLGIIV
Trigger: CACAATTATTCCCAATCTGCAGAGGGGGAAATGGAG...TATCCCAGAGGACTGTTCAAAAGTCTCATTCAATAGAGATGTTGGAGTCCAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR GCA 90 bp GTTTGCTCCCTAACTTTGTTCTGGACTCCAACATCTCTATTGAATGAGACTTTTGAGAAGTTAAGGACCTaGTGTCTGGTTCCACTACCT +
Preference number: 4 (lower is better)
Translates to: VCSLTLFWTPTSLLNETFEKLRT*CLVPLP
Trigger: AGGTAGTGGAACCAGACAGCAGGTCCTTAACTTCTC...AAAAGTCTCATTCAATAGAGATGTTGGAGTCCAGAACAAAGTTAGGGAGCAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR GCA 90 bp AGCAAGGGATTATTGATTCCACTAGACTATGCCACTTCAGAAAACATTAGCAGTCTTCTTTTCAATGGTTaGCCCCAGAGACACACTCTC +
Preference number: 4 (lower is better)
Translates to: SKGLLIPLDYATSENISSLLFNG*PQRHTL
Trigger: GAGAGTGTGTCTCTGGGGGCAACCATTGAAAAGAAG...ACTGCTAATGTTTTCTGAAGTGGCATAGTCTAGTGGAATCAATAATCCCTTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR CCA 90 bp CTTAAAAACAAACGTAATTGTAGGATCCTCTGTTACGACCAGCATAGGTTACTGTTTTGGCTCTTCTTCTaGCTGGACTGGATACCTTGG +
Preference number: 4 (lower is better)
Translates to: LKNKRNCRILCYDQHRLLFWLFF*LDWIPW
Trigger: CCAAGGTATCCAGTCCAGCCAGAAGAAGAGCCAAAA...CAGTAACCTATGCTGGTCGTAACAGAGGATCCTACAATTACGTTTGTTTTTAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR CCA 90 bp CCATTGTGTTTACAAGTGCCTCAAAGTCCATTTACACTAGAAAATCACACACTTCGATCACCACATTCTTaGTCAAGAGGTGCTGAGAGC +
Preference number: 4 (lower is better)
Translates to: PLCLQVPQSPFTLENHTLRSPHS*SRGAES
Trigger: GCTCTCAGCACCTCTTGACCAAGAATGTGGTGATCG...AAGTGTGTGATTTTCTAGTGTAAATGGACTTTGAGGCACTTGTAAACACAATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305454.8
ENST00000522977.5
CDS-3UTR CCA 90 bp AAACCTTCAGGGGCAGAGTTTAGGCCACAGATGACAAATATACAAGGCATGTGTTTGGCATCTATTAAGTaGATAGGGCCACCTAATAGA +
Preference number: 4 (lower is better)
Translates to: KPSGAEFRPQMTNIQGMCLASIK*IGPPNR
Trigger: TCTATTAGGTGGCCCTATCCACTTAATAGATGCCAA...ACACATGCCTTGTATATTTGTCATCTGTGGCCTAAACTCTGCCCCTGAAGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR CCA 90 bp TCCAACATATCAGAGTCTTCTTTTCAATGGTTGCCCCCAGAGACACACTCTCACTCAGATATGAGGATCTaGTGTTCAGAGTCTAAAACA +
Preference number: 4 (lower is better)
Translates to: SNISESSFQWLPPETHSHSDMRI*CSESKT
Trigger: TGTTTTAGACTCTGAACACCAGATCCTCATATCTGA...GTGAGAGTGTGTCTCTGGGGGCAACCATTGAAAAGAAGACTCTGATATGTTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR CCA 90 bp GCATTCTTCTATCTCAGATTCCATCTTTACACAGTACTTCGGGCAGCCTCTACCTCAGATATGAGGATCTaGTGTTCAGAGTCTAAAACA +
Preference number: 4 (lower is better)
Translates to: AFFYLRFHLYTVLRAASTSDMRI*CSESKT
Trigger: TGTTTTAGACTCTGAACACCAGATCCTCATATCTGA...GGTAGAGGCTGCCCGAAGTACTGTGTAAAGATGGAATCTGAGATAGAAGAATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR TCA 90 bp CTTAAAAACAAACGTAATTGTAGGATCCTCTGTTACGACCAGCATAGGTTACTGAGGGTAATCAATGAGTaGGGGAGGATAATGGGTTTG +
Preference number: 4 (lower is better)
Translates to: LKNKRNCRILCYDQHRLLRVINE*GRIMGL
Trigger: CAAACCCATTATCCTCCCTCACTCATTGATTACCCT...CAGTAACCTATGCTGGTCGTAACAGAGGATCCTACAATTACGTTTGTTTTTAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR TCA 90 bp AGCAAGGGATTATTGATTCCACTAGACTATGCCACTTCAGAAAACATTAGCAGTAGGGTAATCAATGAGTaGGGGAGGATAATGGGTTTG +
Preference number: 4 (lower is better)
Translates to: SKGLLIPLDYATSENISSRVINE*GRIMGL
Trigger: CAAACCCATTATCCTCCCTCACTCATTGATTACCCT...ACTGCTAATGTTTTCTGAAGTGGCATAGTCTAGTGGAATCAATAATCCCTTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
ENST00000522977.5
CDS-3UTR CCA 90 bp CCATTGTGTTTACAAGTGCCTCAAAGTCCATTTACACTAGAAAATCACACACTTTCCTTGGGGAAGGGCTaGATACTCTTCAGTCATCTT +
Preference number: 4 (lower is better)
Translates to: PLCLQVPQSPFTLENHTLSLGKG*ILFSHL
Trigger: AAGATGACTGAAGAGTATCCAGCCCTTCCCCAAGGA...AAGTGTGTGATTTTCTAGTGTAAATGGACTTTGAGGCACTTGTAAACACAATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
ENST00000522977.5
CDS-3UTR CCA 90 bp CATAGGTTACTGGTTTGCTCCCTAACTTTGTTCTGGACTCCAACATCTCTATTGTCTCATGGATTCACCTaGAGATATGGAAATAGGGAA +
Preference number: 4 (lower is better)
Translates to: HRLLVCSLTLFWTPTSLLSHGFT*RYGNRE
Trigger: TTCCCTATTTCCATATCTCCAGGTGAATCCATGAGA...CAATAGAGATGTTGGAGTCCAGAACAAAGTTAGGGAGCAAACCAGTAACCTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR CCA 90 bp TCACACATAGCAGTTGAGTCTGAGACCTGTAATGTGGCCAAACACTTCTTTGTATCTCATGGATTCACCTaGAGATATGGAAATAGGGAA +
Preference number: 4 (lower is better)
Translates to: SHIAVESETCNVAKHFFVSHGFT*RYGNRE
Trigger: TTCCCTATTTCCATATCTCCAGGTGAATCCATGAGA...TACAAAGAAGTGTTTGGCCACATTACAGGTCTCAGACTCAACTGCTATGTGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR CCA 90 bp TGCCTATGGGAGGTTCTGAATATGGCTCGTGATTACATTCATCTAATTAACCAAAAGATAATTTGCAGCTaGCATGGGTTTGTGTTGGCC +
Preference number: 4 (lower is better)
Translates to: CLWEVLNMARDYIHLINQKIICS*HGFVLA
Trigger: GGCCAACACAAACCCATGCCAGCTGCAAATTATCTT...TTGGTTAATTAGATGAATGTAATCACGAGCCATATTCAGAACCTCCCATAGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480005.1
CDS-3UTR TCA 90 bp TTCTGGACTCCAACATCTCTATTGAATGAGACTTTTGAACAGTCCTCTGGGATATGTACCTTGTCAAGGTaGAGTAAATGCAGTAATGGA +
Preference number: 4 (lower is better)
Translates to: FWTPTSLLNETFEQSSGICTLSR*SKCSNG
Trigger: TCCATTACTGCATTTACTTCACCTTGACAAGGTACA...TATCCCAGAGGACTGTTCAAAAGTCTCATTCAATAGAGATGTTGGAGTCCAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR TCA 90 bp TTCTGGACTCCAACATCTCTATTGAATGAGACTTTTGAACAGTCCTCTGGGATAAGTTTAGGCCACAGATaGCAAATATACAAGGCATGT +
Preference number: 4 (lower is better)
Translates to: FWTPTSLLNETFEQSSGISLGHR*QIYKAC
Trigger: ACATGCCTTGTATATTTGTCATCTGTGGCCTAAACT...TATCCCAGAGGACTGTTCAAAAGTCTCATTCAATAGAGATGTTGGAGTCCAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR GCA 90 bp GTTTGCTCCCTAACTTTGTTCTGGACTCCAACATCTCTATTGAATGAGACTTTTCATAGGTTACTGGTTTaGTCCCTAACTTTGTTCTGG +
Preference number: 4 (lower is better)
Translates to: VCSLTLFWTPTSLLNETFHRLLV*SLTLFW
Trigger: CCAGAACAAAGTTAGGGAGCAAACCAGTAACCTATG...AAAAGTCTCATTCAATAGAGATGTTGGAGTCCAGAACAAAGTTAGGGAGCAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR GCA 90 bp AAATCACTTTCAGATATGAGGATCTGGTGTTCAGAGTCTAAAACAATGGTTGAACTAACCCCTCTCTTCTaGAGCTTCTCAGGATTTGCT +
Preference number: 4 (lower is better)
Translates to: KSLSDMRIWCSESKTMVELTPLF*SFSGFA
Trigger: AGCAAATCCTGAGAAGCTGCAGAAGAGAGGGGTTAG...TTCAACCATTGTTTTAGACTCTGAACACCAGATCCTCATATCTGAAAGTGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450307.7
CDS-3UTR GCA 90 bp CTTAAAAACAAACGTAATTGTAGGATCCTCTGTTACGACCAGCATAGGTTACTGCAGAGATTTTCCATATaGTCGATTCCCACACAGATT +
Preference number: 4 (lower is better)
Translates to: LKNKRNCRILCYDQHRLLQRFSI*SIPTQI
Trigger: AATCTGTGTGGGAATCGAGCATATGGAAAATCTCTG...CAGTAACCTATGCTGGTCGTAACAGAGGATCCTACAATTACGTTTGTTTTTAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR TCA 90 bp TTAAAAACAAACGTAATTGTAGGATCCTCTGTTACGACCAGCATAGGTTACTGGATAGTGCTTTGTCCTTaGAAATTGTACCTTGTCAAG +
Preference number: 4 (lower is better)
Translates to: LKTNVIVGSSVTTSIGYWIVLCP*KLYLVK
Trigger: CTTGACAAGGTACAATTTTCAAGGACAAAGCACTAT...CCAGTAACCTATGCTGGTCGTAACAGAGGATCCTACAATTACGTTTGTTTTTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR GCA 90 bp GTTTGCTCCCTAACTTTGTTCTGGACTCCAACATCTCTATTGAATGAGACTTTTCATTGTGTTTACAAGTaGCTCAAAGTCCATTTACAC +
Preference number: 4 (lower is better)
Translates to: VCSLTLFWTPTSLLNETFHCVYK*LKVHLH
Trigger: GTGTAAATGGACTTTGAGGCACTTGTAAACACAATG...AAAAGTCTCATTCAATAGAGATGTTGGAGTCCAGAACAAAGTTAGGGAGCAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR CCA 90 bp CCATTGTGTTTACAAGTGCCTCAAAGTCCATTTACACTAGAAAATCACACACTTTTGGCATCTATTAAGTaGATAGGGCCACCTAATAGA +
Preference number: 4 (lower is better)
Translates to: PLCLQVPQSPFTLENHTLLASIK*IGPPNR
Trigger: TCTATTAGGTGGCCCTATCCACTTAATAGATGCCAA...AAGTGTGTGATTTTCTAGTGTAAATGGACTTTGAGGCACTTGTAAACACAATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR CCA 90 bp GTTTGCTCCCTAACTTTGTTCTGGACTCCAACATCTCTATTGAATGAGACTTTTCTTTGTATCAACATATaGCAATTTCCAGCACTGTCT +
Preference number: 4 (lower is better)
Translates to: VCSLTLFWTPTSLLNETFLCINI*QFPALS
Trigger: AGACAGTGCTGGAAATTGCCATATGTTGATACAAAG...AAAAGTCTCATTCAATAGAGATGTTGGAGTCCAGAACAAAGTTAGGGAGCAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR CCA 90 bp TTAAAAACAAACGTAATTGTAGGATCCTCTGTTACGACCAGCATAGGTTACTGGCTTTGTATCAACATATaGCAATTTCCAGCACTGTCT +
Preference number: 4 (lower is better)
Translates to: LKTNVIVGSSVTTSIGYWLCINI*QFPALS
Trigger: AGACAGTGCTGGAAATTGCCATATGTTGATACAAAG...CCAGTAACCTATGCTGGTCGTAACAGAGGATCCTACAATTACGTTTGTTTTTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS CCA 90 bp CACTGGCGGTATCGGGTCTGGCAGAGGCTTTGGCCGGGTGGGCTGTaGGCGGCCGCGCGGTCTGGAGCCGCCCAAACCTGCGGCGGTCGC +
Preference number: 5 (lower is better)
Translates to: HWRYRVWQRLWPGGL*AAARSGAAQTCGGR
Trigger: GCGACCGCCGCAGGTTTGGGCGGCTCCAGACCGCGCGGCCGCCCACAGCCCACCCGGCCAAAGCCTCTGCCAGACCCGATACCGCCAGTG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522977.5
CDS GCA 90 bp AGCTCCAGGGGCTGGTGCGTGTACAGGTCCGACTCGATCACCACCTaGCGGGCGGGGGAAACGCGGTTAGCCCACTCCTCTGCTCGGGCC +
Preference number: 5 (lower is better)
Translates to: SSRGWCVYRSDSITT*RAGETRLAHSSARA
Trigger: GGCCCGAGCAGAGGAGTGGGCTAACCGCGTTTCCCCCGCCCGGCAGGTGGTGATCGAGTCGGACCTGTACACGCACCAGCCCCTGGAGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460144.5
CDS GCA 90 bp GATCACCACCTGCCGGGCGGGGGAAACGCGGTTAGCCCACTCCTCTaGTCGGGCCTAGGGACCCATGGAACCCCAGGGCAGGAGCTTTGC +
Preference number: 5 (lower is better)
Translates to: DHHLPGGGNAVSPLL*SGLGTHGTPGQELC
Trigger: GCAAAGCTCCTGCCCTGGGGTTCCATGGGTCCCTAGGCCCGAGCAGAGGAGTGGGCTAACCGCGTTTCCCCCGCCCGGCAGGTGGTGATC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460144.5
CDS-3UTR CAA 90 bp CTTGTCCACATTTTCCGGAGGATGCCGGGGACGCCGCAGGAAGCACTGCCTGTCGGTCTGGCAGAGGCTTaGGCCGGGTGGGCTGTGGGC +
Preference number: 5 (lower is better)
Translates to: LVHIFRRMPGTPQEALPVGLAEA*AGWAVG
Trigger: GCCCACAGCCCACCCGGCCAAAGCCTCTGCCAGACC...GACAGGCAGTGCTTCCTGCGGCGTCCCCGGCATCCTCCGGAAAATGTGGACAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000450307.7
ENST00000460144.5
ENST00000522977.5
CDS GCA 90 bp GGGTCCCTGCGGTCTCCGCGGTGGGGCAGCAGCTCCAGGGGCTGGTaGGTGTACAGGTCCGACTCGATCACCACATTCTTGGTCAAGAGG +
Preference number: 5 (lower is better)
Translates to: GSLRSPRWGSSSRGW*VYRSDSITTFLVKR
Trigger: CCTCTTGACCAAGAATGTGGTGATCGAGTCGGACCTGTACACGCACCAGCCCCTGGAGCTGCTGCCCCACCGCGGAGACCGCAGGGACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000305454.8
ENST00000480005.1
ENST00000484919.5
ENST00000485639.1
ENST00000521495.5
ENST00000522977.5
CDS CCA 90 bp CCAGGGTCCCTGCGGTCTCCGCGGTGGGGCAGCAGCTCCAGGGGCTaGTGCGTGTACAGGTCCGACTCGATCACCACATTCTTGGTCAAG +
Preference number: 5 (lower is better)
Translates to: PGSLRSPRWGSSSRG*CVYRSDSITTFLVK
Trigger: CTTGACCAAGAATGTGGTGATCGAGTCGGACCTGTACACGCACCAGCCCCTGGAGCTGCTGCCCCACCGCGGAGACCGCAGGGACCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000305454.8
ENST00000480005.1
ENST00000484919.5
ENST00000485639.1
ENST00000521495.5
ENST00000522977.5
CDS-3UTR CAA 90 bp GGTTTGTGTTGGCCTCTCGAGGGTCTGTCAACCAGGCGGCCTGGTGCTCTTCTGGGTCTGGCAGAGGCTTaGGCCGGGTGGGCTGTGGGC +
Preference number: 5 (lower is better)
Translates to: GLCWPLEGLSTRRPGALLGLAEA*AGWAVG
Trigger: GCCCACAGCCCACCCGGCCAAAGCCTCTGCCAGACC...CAGAAGAGCACCAGGCCGCCTGGTTGACAGACCCTCGAGAGGCCAACACAAACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480005.1
CDS CCA 90 bp ACCAGGCGGCCTGGTGCTCTTCTGGGGAAGGAAGGATCAGGACAGTaGGAGGCCACAGGCAGTGGGGCCAGAGACGCAGCACTTACCCTC +
Preference number: 5 (lower is better)
Translates to: TRRPGALLGKEGSGQ*EATGSGARDAALTL
Trigger: GAGGGTAAGTGCTGCGTCTCTGGCCCCACTGCCTGTGGCCTCCCACTGTCCTGATCCTTCCTTCCCCAGAAGAGCACCAGGCCGCCTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480005.1
CDS-3UTR CAA 90 bp TGCAGCTGGCATGGGTTTGTGTTGGCCTCTCGAGGGTCTGTCAACCAGGCGGCCGCAGCTGGCATGGGTTaGTGTTGGCCTCTCGAGGGT +
Preference number: 5 (lower is better)
Translates to: CSWHGFVLASRGSVNQAAAAGMG*CWPLEG
Trigger: ACCCTCGAGAGGCCAACACAAACCCATGCCAGCTGC...GGCCGCCTGGTTGACAGACCCTCGAGAGGCCAACACAAACCCATGCCAGCTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480005.1
CDS GCA 90 bp CTCTGCTCGGGCCTAGGGACCCATGGAACCCCAGGGCAGGAGCTTTaGAGATGGAGCTCGCATCGAGGGAGTTTCTGGATCCTTCGTGAT +
Preference number: 5 (lower is better)
Translates to: LCSGLGTHGTPGQEL*RWSSHRGSFWILRD
Trigger: ATCACGAAGGATCCAGAAACTCCCTCGATGCGAGCTCCATCTGCAAAGCTCCTGCCCTGGGGTTCCATGGGTCCCTAGGCCCGAGCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460144.5
CDS-3UTR CAA 90 bp GTGTGGCTCAGTTTCAATCCTGAAGGTTTTTCCTCTTGTCCGGGGAACCTTGGCGGTCTGGCAGAGGCTTaGGCCGGGTGGGCTGTGGGC +
Preference number: 5 (lower is better)
Translates to: VWLSFNPEGFSSCPGNLGGLAEA*AGWAVG
Trigger: GCCCACAGCCCACCCGGCCAAAGCCTCTGCCAGACC...GCCAAGGTTCCCCGGACAAGAGGAAAAACCTTCAGGATTGAAACTGAGCCACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
ENST00000522977.5
CDS-3UTR CAA 90 bp GGCCTCCATTTCCCCCTCTGCAGATTGGGAATAATTGTGCTTTCTTCCACAGGGGGTCTGGCAGAGGCTTaGGCCGGGTGGGCTGTGGGC +
Preference number: 5 (lower is better)
Translates to: GLHFPLCRLGIIVLSSTGGLAEA*AGWAVG
Trigger: GCCCACAGCCCACCCGGCCAAAGCCTCTGCCAGACC...CCCTGTGGAAGAAAGCACAATTATTCCCAATCTGCAGAGGGGGAAATGGAGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS GCA 90 bp TATGTCCTGCAGGCTGTCTCTTTGTGGCCAAACGGAATCTCTCCCTaGCCCACTGTGCAATGGCCCTGTCAGCGGCTGACACAGGGGAAG +
Preference number: 5 (lower is better)
Translates to: YVLQAVSLWPNGISP*PTVQWPCQRLTQGK
Trigger: CTTCCCCTGTGTCAGCCGCTGACAGGGCCATTGCACAGTGGGGCAGGGAGAGATTCCGTTTGGCCACAAAGAGACAGCCTGCAGGACATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488582.1
CDS-3UTR CAA 90 bp TCCACATTTTCCGGAGGATGCCGGGGACGCCGCAGGAAGCACTGCCTGTCAGTGGCCAACACAGGGCACTaGAAGAGGGTCACCTTTAGT +
Preference number: 5 (lower is better)
Translates to: STFSGGCRGRRRKHCLSVANTGH*KRVTFS
Trigger: ACTAAAGGTGACCCTCTTCAAGTGCCCTGTGTTGGC...CACTGACAGGCAGTGCTTCCTGCGGCGTCCCCGGCATCCTCCGGAAAATGTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000450307.7
ENST00000460144.5
ENST00000522977.5
CDS-3UTR CAA 90 bp CTTGTCCACATTTTCCGGAGGATGCCGGGGACGCCGCAGGAAGCACTGCCTGTCGGGAGGATAATGGGTTaGGACCAGCTACTAGCAGAG +
Preference number: 5 (lower is better)
Translates to: LVHIFRRMPGTPQEALPVGRIMG*DQLLAE
Trigger: CTCTGCTAGTAGCTGGTCCAAACCCATTATCCTCCC...GACAGGCAGTGCTTCCTGCGGCGTCCCCGGCATCCTCCGGAAAATGTGGACAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000450307.7
ENST00000460144.5
ENST00000522977.5
CDS-3UTR CAA 90 bp TCCACATTTTCCGGAGGATGCCGGGGACGCCGCAGGAAGCACTGCCTGTCAGTGCTTGAACCCAGGAGTTaGAGACCAGTCTGGGCAACA +
Preference number: 5 (lower is better)
Translates to: STFSGGCRGRRRKHCLSVLEPRS*RPVWAT
Trigger: TGTTGCCCAGACTGGTCTCAAACTCCTGGGTTCAAG...CACTGACAGGCAGTGCTTCCTGCGGCGTCCCCGGCATCCTCCGGAAAATGTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450307.7
ENST00000460144.5
CDS-3UTR CAA 90 bp GTTTTTCCTCTTGTCCGGGGAACCTTGGCCAACACAGGGCACTTGAAGAGGGTCCTTGTCCGGGGAACCTaGGCCAACACAGGGCACTTG +
Preference number: 5 (lower is better)
Translates to: VFPLVRGTLANTGHLKRVLVRGT*ANTGHL
Trigger: CAAGTGCCCTGTGTTGGCCAAGGTTCCCCGGACAAG...GACCCTCTTCAAGTGCCCTGTGTTGGCCAAGGTTCCCCGGACAAGAGGAAAAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
ENST00000522977.5
CDS-3UTR CAA 90 bp GGTTCAGAAATCCCCACGGGTCTGGCAGAGGCTTTGGCCGGGTGGGCTGTGGGCAGGGGCAGTTTTATATaGCCTTCGAGGGACATTTCT +
Preference number: 5 (lower is better)
Translates to: GSEIPTGLAEALAGWAVGRGSFI*PSRDIS
Trigger: AGAAATGTCCCTCGAAGGCAATATAAAACTGCCCCT...GCCCACAGCCCACCCGGCCAAAGCCTCTGCCAGACCCGTGGGGATTTCTGAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000450307.7
ENST00000460144.5
CDS-3UTR CAA 90 bp TCCAACATATCAGAGTCTTCTTTTCAATGGTTGCCCCCAGAGACACACTCTCACGGTCTGGCAGAGGCTTaGGCCGGGTGGGCTGTGGGC +
Preference number: 5 (lower is better)
Translates to: SNISESSFQWLPPETHSHGLAEA*AGWAVG
Trigger: GCCCACAGCCCACCCGGCCAAAGCCTCTGCCAGACC...GTGAGAGTGTGTCTCTGGGGGCAACCATTGAAAAGAAGACTCTGATATGTTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR CAA 90 bp GGTTCAGAAATCCCCACGGGTCTGGCAGAGGCTTTGGCCGGGTGGGCTGTGGGCTTCTTAAAAGAGCACTaGATGCCCAGGTCTCCAAAT +
Preference number: 5 (lower is better)
Translates to: GSEIPTGLAEALAGWAVGFLKEH*MPRSPN
Trigger: ATTTGGAGACCTGGGCATCAAGTGCTCTTTTAAGAA...GCCCACAGCCCACCCGGCCAAAGCCTCTGCCAGACCCGTGGGGATTTCTGAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450307.7
ENST00000460144.5
CDS-3UTR CAA 90 bp TGTGTTGGCCTCTCGAGGGTCTGTCAACCAGGCGGCCTGGTGCTCTTCTGGGGAGGTGGGCAGGGGATCTaGAACTTACTCATGAGATAT +
Preference number: 5 (lower is better)
Translates to: CVGLSRVCQPGGLVLFWGGGQGI*NLLMRY
Trigger: ATATCTCATGAGTAAGTTCAAGATCCCCTGCCCACC...TCCCCAGAAGAGCACCAGGCCGCCTGGTTGACAGACCCTCGAGAGGCCAACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480005.1
CDS-3UTR CAA 90 bp CAATGGTTGAAGAGCAGAGATAGCAAGGTGGAATCCCAGAGGCCCAGGCCTCTCGCTGGACTGGATACCTaGGAAGGAATCACGGTGGTG +
Preference number: 5 (lower is better)
Translates to: QWLKSRDSKVESQRPRPLAGLDT*EGITVV
Trigger: CACCACCGTGATTCCTTCCAAGGTATCCAGTCCAGC...GAGAGGCCTGGGCCTCTGGGATTCCACCTTGCTATCTCTGCTCTTCAACCATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR CAA 90 bp GTGTGGCTCAGTTTCAATCCTGAAGGTTTTTCCTCTTGTCCGGGGAACCTTGGCCTTGTCCGGGGAACCTaGGCCAACACAGGGCACTTG +
Preference number: 5 (lower is better)
Translates to: VWLSFNPEGFSSCPGNLGLVRGT*ANTGHL
Trigger: CAAGTGCCCTGTGTTGGCCAAGGTTCCCCGGACAAG...GCCAAGGTTCCCCGGACAAGAGGAAAAACCTTCAGGATTGAAACTGAGCCACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
ENST00000522977.5
CDS GCA 90 bp AGAGACGCAGCACTTACCCTCTCATCAGAACAGCTCCCTTCTCTGTaGCCATGGCTGTCGCCTCCAATGAGGCAGAGGCTGAAGTTTTCA +
Preference number: 5 (lower is better)
Translates to: RDAALTLSSEQLPSL*PWLSPPMRQRLKFS
Trigger: TGAAAACTTCAGCCTCTGCCTCATTGGAGGCGACAGCCATGGGCACAGAGAAGGGAGCTGTTCTGATGAGAGGGTAAGTGCTGCGTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480005.1
CDS CCA 90 bp GCAGCACTTACCCTCTCATCAGAACAGCTCCCTTCTCTGTGCCCATaGCTGTCGCCTCCAATGAGGCAGAGGCTGAAGTTTTCACTGAGA +
Preference number: 5 (lower is better)
Translates to: AALTLSSEQLPSLCP*LSPPMRQRLKFSLR
Trigger: TCTCAGTGAAAACTTCAGCCTCTGCCTCATTGGAGGCGACAGCCATGGGCACAGAGAAGGGAGCTGTTCTGATGAGAGGGTAAGTGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480005.1
CDS-3UTR CAA 90 bp CCAGGCCTCTCAGCCACCCTCTCGCTTCTCATGGATTCACCTGGAGATATGGAAGCCAACACAGGGCACTaGAAGAGGGTCACCTTTAGT +
Preference number: 5 (lower is better)
Translates to: PGLSATLSLLMDSPGDMEANTGH*KRVTFS
Trigger: ACTAAAGGTGACCCTCTTCAAGTGCCCTGTGTTGGC...TTCCATATCTCCAGGTGAATCCATGAGAAGCGAGAGGGTGGCTGAGAGGCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR CAA 90 bp TCCACATTTTCCGGAGGATGCCGGGGACGCCGCAGGAAGCACTGCCTGTCAGTGCAAAGCAAGGGATTATaGATTCCACTAGACTATGCC +
Preference number: 5 (lower is better)
Translates to: STFSGGCRGRRRKHCLSVQSKGL*IPLDYA
Trigger: GGCATAGTCTAGTGGAATCAATAATCCCTTGCTTTG...CACTGACAGGCAGTGCTTCCTGCGGCGTCCCCGGCATCCTCCGGAAAATGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000450307.7
ENST00000460144.5
ENST00000522977.5
CDS TCA 90 bp TGCCTGCGGTGTGGAGGATGTAGTCCAGGGCATACAGGTATGTGCTaGATCGAGTTGAAGACTCACTGTCCTCTCATCAGAACAGCTCCC +
Preference number: 5 (lower is better)
Translates to: CLRCGGCSPGHTGMC*IELKTHCPLIRTAP
Trigger: GGGAGCTGTTCTGATGAGAGGACAGTGAGTCTTCAACTCGATTCAGCACATACCTGTATGCCCTGGACTACATCCTCCACACCGCAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485639.1
CDS GCA 90 bp GGGTCAACTTGGACTTTCAGAGTTTCCAGAGGGAATTCCAACTCCTaGACGTGGGCAGCAGACTCCCAGCTCTTTTCCCTCTCTCTGGAT +
Preference number: 5 (lower is better)
Translates to: GSTWTFRVSRGNSNS*TWAADSQLFSLSLD
Trigger: ATCCAGAGAGAGGGAAAAGAGCTGGGAGTCTGCTGCCCACGTGCAGGAGTTGGAATTCCCTCTGGAAACTCTGAAAGTCCAAGTTGACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488582.1
CDS GCA 90 bp GAGAAAATAACCCAACCCTTCACCACCCTGAAACGCCTTTTCTGCTaGCTGCGGTGTGGAGGATGTAGTCCAGGGCATACAGGTATGTGC +
Preference number: 5 (lower is better)
Translates to: EKITQPFTTLKRLFC*LRCGGCSPGHTGMC
Trigger: GCACATACCTGTATGCCCTGGACTACATCCTCCACACCGCAGGCAGCAGAAAAGGCGTTTCAGGGTGGTGAAGGGTTGGGTTATTTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485639.1
CDS-3UTR CAA 90 bp GGTGCGTGTGGCTCAGTTTCAATCCTGAAGGTTTTTCCTCTTGTCCGGGGAACCGCCAACACAGGGCACTaGAAGAGGGTCACCTTTAGT +
Preference number: 5 (lower is better)
Translates to: GACGSVSILKVFPLVRGTANTGH*KRVTFS
Trigger: ACTAAAGGTGACCCTCTTCAAGTGCCCTGTGTTGGC...GGTTCCCCGGACAAGAGGAAAAACCTTCAGGATTGAAACTGAGCCACACGCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
ENST00000522977.5
CDS-3UTR CAA 90 bp GTTTTTCCTCTTGTCCGGGGAACCTTGGCCAACACAGGGCACTTGAAGAGGGTCACTTCCCCAAGTCAGTaGCTAGAGAGTAGGCAAAGC +
Preference number: 5 (lower is better)
Translates to: VFPLVRGTLANTGHLKRVTSPSQ*LESRQS
Trigger: GCTTTGCCTACTCTCTAGCAACTGACTTGGGGAAGT...GACCCTCTTCAAGTGCCCTGTGTTGGCCAAGGTTCCCCGGACAAGAGGAAAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS GCA 90 bp TCTGAGAAAATAACCCAACCCTTCACCACCCTGAAACGCCTTTTCTaGTGCCTGCGGTGTGGAGGATGTAGTCCAGGGCATACAGGTATG +
Preference number: 5 (lower is better)
Translates to: SEKITQPFTTLKRLF*CLRCGGCSPGHTGM
Trigger: CATACCTGTATGCCCTGGACTACATCCTCCACACCGCAGGCAGCAGAAAAGGCGTTTCAGGGTGGTGAAGGGTTGGGTTATTTTCTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485639.1
CDS CCA 90 bp CCGACTCGATCACCACATTCTTGGTCAAGAGGTGCTGAGAGCTTTTaGCTCTTCTTCTGGCTGGACTGGATACCTTGGAAGGAATCACGG +
Preference number: 5 (lower is better)
Translates to: PTRSPHSWSRGAESF*LFFWLDWIPWKESR
Trigger: CCGTGATTCCTTCCAAGGTATCCAGTCCAGCCAGAAGAAGAGCCAAAAGCTCTCAGCACCTCTTGACCAAGAATGTGGTGATCGAGTCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000305454.8
ENST00000480005.1
ENST00000484919.5
ENST00000485639.1
ENST00000521495.5
ENST00000522977.5
CDS-3UTR CAA 90 bp AAAACTTCCCCAAGTCAGTTGCTAGAGAGTAGGCAAAGCAGGGAGTCCACTGGAGCTGGACTGGATACCTaGGAAGGAATCACGGTGGTG +
Preference number: 5 (lower is better)
Translates to: KTSPSQLLESRQSRESTGAGLDT*EGITVV
Trigger: CACCACCGTGATTCCTTCCAAGGTATCCAGTCCAGC...TCCAGTGGACTCCCTGCTTTGCCTACTCTCTAGCAACTGACTTGGGGAAGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR CAA 90 bp CCAGGCCTCTCAGCCACCCTCTCGCTTCTCATGGATTCACCTGGAGATATGGAAGTTTGCTCCCTAACTTaGTTCTGGACTCCAACATCT +
Preference number: 5 (lower is better)
Translates to: PGLSATLSLLMDSPGDMEVCSLT*FWTPTS
Trigger: AGATGTTGGAGTCCAGAACAAAGTTAGGGAGCAAAC...TTCCATATCTCCAGGTGAATCCATGAGAAGCGAGAGGGTGGCTGAGAGGCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR CAA 90 bp AGTACTTCGGGCAGCCTCTACCCATCAATCATGTTTAGTGTTTGGGATGAAAATCCCAGGGCAGGAGCTTaGCAGATGGAGCTCGCATCG +
Preference number: 5 (lower is better)
Translates to: STSGSLYPSIMFSVWDENPRAGA*QMELAS
Trigger: CGATGCGAGCTCCATCTGCAAAGCTCCTGCCCTGGG...ATTTTCATCCCAAACACTAAACATGATTGATGGGTAGAGGCTGCCCGAAGTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460144.5
CDS-3UTR CAA 90 bp ACCTCCCAAATGACTTCTCCAAGCCTAAAGAGTGGCGTTAATGAAGTGGAAACCTGGCATGGGTTTGTGTaGGCCTCTCGAGGGTCTGTC +
Preference number: 5 (lower is better)
Translates to: TSQMTSPSLKSGVNEVETWHGFV*ASRGSV
Trigger: GACAGACCCTCGAGAGGCCAACACAAACCCATGCCA...GGTTTCCACTTCATTAACGCCACTCTTTAGGCTTGGAGAAGTCATTTGGGAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480005.1
CDS-3UTR CAA 90 bp GGTGCGTGTGGCTCAGTTTCAATCCTGAAGGTTTTTCCTCTTGTCCGGGGAACCAGGGGCAGTTTTATATaGCCTTCGAGGGACATTTCT +
Preference number: 5 (lower is better)
Translates to: GACGSVSILKVFPLVRGTRGSFI*PSRDIS
Trigger: AGAAATGTCCCTCGAAGGCAATATAAAACTGCCCCT...GGTTCCCCGGACAAGAGGAAAAACCTTCAGGATTGAAACTGAGCCACACGCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
ENST00000522977.5
CDS-3UTR CAA 90 bp AAAACTTCCCCAAGTCAGTTGCTAGAGAGTAGGCAAAGCAGGGAGTCCACTGGAACTTCCCCAAGTCAGTaGCTAGAGAGTAGGCAAAGC +
Preference number: 5 (lower is better)
Translates to: KTSPSQLLESRQSRESTGTSPSQ*LESRQS
Trigger: GCTTTGCCTACTCTCTAGCAACTGACTTGGGGAAGT...TCCAGTGGACTCCCTGCTTTGCCTACTCTCTAGCAACTGACTTGGGGAAGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR CAA 90 bp GTTTCAATCCTGAAGGTTTTTCCTCTTGTCCGGGGAACCTTGGCCAACACAGGGGCTCTAACACAGGCATaGAAGCCTGACACTCACATA +
Preference number: 5 (lower is better)
Translates to: VSILKVFPLVRGTLANTGALTQA*KPDTHI
Trigger: TATGTGAGTGTCAGGCTTCAATGCCTGTGTTAGAGC...CCCTGTGTTGGCCAAGGTTCCCCGGACAAGAGGAAAAACCTTCAGGATTGAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR CAA 90 bp GTTTTTCCTCTTGTCCGGGGAACCTTGGCCAACACAGGGCACTTGAAGAGGGTCGCAGCTTCTCAGGATTaGCTGATAGTATACAGTAGT +
Preference number: 5 (lower is better)
Translates to: VFPLVRGTLANTGHLKRVAASQD*LIVYSS
Trigger: ACTACTGTATACTATCAGCAAATCCTGAGAAGCTGC...GACCCTCTTCAAGTGCCCTGTGTTGGCCAAGGTTCCCCGGACAAGAGGAAAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450307.7
CDS CCA 90 bp CTTGGTCAAGTAGAGTATTCTTGGTCAAGAGGTGCTGAGAGCTTTTaGCTCTTCTTCTGGCTGGACTGGATACCTTGGAAGGAATCACGG +
Preference number: 5 (lower is better)
Translates to: LGQVEYSWSRGAESF*LFFWLDWIPWKESR
Trigger: CCGTGATTCCTTCCAAGGTATCCAGTCCAGCCAGAAGAAGAGCCAAAAGCTCTCAGCACCTCTTGACCAAGAATACTCTACTTGACCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450307.7
CDS CCA 90 bp GGAACAGCGACAAAATATTCTTGGTCAAGAGGTGCTGAGAGCTTTTaGCTCTTCTTCTGGCTGGACTGGATACCTTGGAAGGAATCACGG +
Preference number: 5 (lower is better)
Translates to: GTATKYSWSRGAESF*LFFWLDWIPWKESR
Trigger: CCGTGATTCCTTCCAAGGTATCCAGTCCAGCCAGAAGAAGAGCCAAAAGCTCTCAGCACCTCTTGACCAAGAATATTTTGTCGCTGTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460144.5
CDS-3UTR CAA 90 bp TTGACACACTTCTTAACCGGTGGGCAGGGGATCTTGAACTTACTCATGAGATATGCTGGACTGGATACCTaGGAAGGAATCACGGTGGTG +
Preference number: 5 (lower is better)
Translates to: LTHFLTGGQGILNLLMRYAGLDT*EGITVV
Trigger: CACCACCGTGATTCCTTCCAAGGTATCCAGTCCAGC...ATATCTCATGAGTAAGTTCAAGATCCCCTGCCCACCGGTTAAGAAGTGTGTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480005.1
CDS-3UTR CAA 90 bp GTTTCAATCCTGAAGGTTTTTCCTCTTGTCCGGGGAACCTTGGCCAACACAGGGCACAGATTTGATGTTTaGGGTTCAGAAATCCCCACG +
Preference number: 5 (lower is better)
Translates to: VSILKVFPLVRGTLANTGHRFDV*GSEIPT
Trigger: CGTGGGGATTTCTGAACCCAAAACATCAAATCTGTG...CCCTGTGTTGGCCAAGGTTCCCCGGACAAGAGGAAAAACCTTCAGGATTGAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR CAA 90 bp CTCTGTTACGACCAGCATAGGTTACTGGTTTGCTCCCTAACTTTGTTCTGGACTGCCAACACAGGGCACTaGAAGAGGGTCACCTTTAGT +
Preference number: 5 (lower is better)
Translates to: LCYDQHRLLVCSLTLFWTANTGH*KRVTFS
Trigger: ACTAAAGGTGACCCTCTTCAAGTGCCCTGTGTTGGC...AGTCCAGAACAAAGTTAGGGAGCAAACCAGTAACCTATGCTGGTCGTAACAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR CAA 90 bp CTCTGTTACGACCAGCATAGGTTACTGGTTTGCTCCCTAACTTTGTTCTGGACTGGGAGGATAATGGGTTaGGACCAGCTACTAGCAGAG +
Preference number: 5 (lower is better)
Translates to: LCYDQHRLLVCSLTLFWTGRIMG*DQLLAE
Trigger: CTCTGCTAGTAGCTGGTCCAAACCCATTATCCTCCC...AGTCCAGAACAAAGTTAGGGAGCAAACCAGTAACCTATGCTGGTCGTAACAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR CAA 90 bp ACCACAGCATTCTTCTATCTCAGATTCCATCTTTACACAGTACTTCGGGCAGCCGGGAGGATAATGGGTTaGGACCAGCTACTAGCAGAG +
Preference number: 5 (lower is better)
Translates to: TTAFFYLRFHLYTVLRAAGRIMG*DQLLAE
Trigger: CTCTGCTAGTAGCTGGTCCAAACCCATTATCCTCCC...GGCTGCCCGAAGTACTGTGTAAAGATGGAATCTGAGATAGAAGAATGCTGTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR CAA 90 bp TGCGTGTGGCTCAGTTTCAATCCTGAAGGTTTTTCCTCTTGTCCGGGGAACCTTTCTTCTTTTCAATGGTaGCCCCCAGAGACACACTCT +
Preference number: 5 (lower is better)
Translates to: CVWLSFNPEGFSSCPGNLSSFQW*PPETHS
Trigger: AGAGTGTGTCTCTGGGGGCAACCATTGAAAAGAAGA...AAGGTTCCCCGGACAAGAGGAAAAACCTTCAGGATTGAAACTGAGCCACACGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR CAA 90 bp CACCCTCTCGCTTCTCATGGATTCACCTGGAGATATGGAAATAGGGAACTCAGCGCTCTAACACAGGCATaGAAGCCTGACACTCACATA +
Preference number: 5 (lower is better)
Translates to: HPLASHGFTWRYGNRELSALTQA*KPDTHI
Trigger: TATGTGAGTGTCAGGCTTCAATGCCTGTGTTAGAGC...GCTGAGTTCCCTATTTCCATATCTCCAGGTGAATCCATGAGAAGCGAGAGGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR CAA 90 bp GTTTTTCCTCTTGTCCGGGGAACCTTGGCCAACACAGGGCACTTGAAGAGGGTCAGTCTAAAACAATGGTaGAAGAGCAGAGATAGCAAG +
Preference number: 5 (lower is better)
Translates to: VFPLVRGTLANTGHLKRVSLKQW*KSRDSK
Trigger: CTTGCTATCTCTGCTCTTCAACCATTGTTTTAGACT...GACCCTCTTCAAGTGCCCTGTGTTGGCCAAGGTTCCCCGGACAAGAGGAAAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR CAA 90 bp GTGTGGCTCAGTTTCAATCCTGAAGGTTTTTCCTCTTGTCCGGGGAACCTTGGCGTTTGCTCCCTAACTTaGTTCTGGACTCCAACATCT +
Preference number: 5 (lower is better)
Translates to: VWLSFNPEGFSSCPGNLGVCSLT*FWTPTS
Trigger: AGATGTTGGAGTCCAGAACAAAGTTAGGGAGCAAAC...GCCAAGGTTCCCCGGACAAGAGGAAAAACCTTCAGGATTGAAACTGAGCCACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR CAA 90 bp TGCGTGTGGCTCAGTTTCAATCCTGAAGGTTTTTCCTCTTGTCCGGGGAACCTTCACAGATTTGATGTTTaGGGTTCAGAAATCCCCACG +
Preference number: 5 (lower is better)
Translates to: CVWLSFNPEGFSSCPGNLHRFDV*GSEIPT
Trigger: CGTGGGGATTTCTGAACCCAAAACATCAAATCTGTG...AAGGTTCCCCGGACAAGAGGAAAAACCTTCAGGATTGAAACTGAGCCACACGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR CAA 90 bp GCATTCTTCTATCTCAGATTCCATCTTTACACAGTACTTCGGGCAGCCTCTACCACTTCCCCAAGTCAGTaGCTAGAGAGTAGGCAAAGC +
Preference number: 5 (lower is better)
Translates to: AFFYLRFHLYTVLRAASTTSPSQ*LESRQS
Trigger: GCTTTGCCTACTCTCTAGCAACTGACTTGGGGAAGT...GGTAGAGGCTGCCCGAAGTACTGTGTAAAGATGGAATCTGAGATAGAAGAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR CAA 90 bp GGTGCGTGTGGCTCAGTTTCAATCCTGAAGGTTTTTCCTCTTGTCCGGGGAACCAGTCTAAAACAATGGTaGAAGAGCAGAGATAGCAAG +
Preference number: 5 (lower is better)
Translates to: GACGSVSILKVFPLVRGTSLKQW*KSRDSK
Trigger: CTTGCTATCTCTGCTCTTCAACCATTGTTTTAGACT...GGTTCCCCGGACAAGAGGAAAAACCTTCAGGATTGAAACTGAGCCACACGCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR CAA 90 bp AAACCTTCAGGGGCAGAGTTTAGGCCACAGATGACAAATATACAAGGCATGTGTCTTGAACCCAGGAGTTaGAGACCAGTCTGGGCAACA +
Preference number: 5 (lower is better)
Translates to: KPSGAEFRPQMTNIQGMCLEPRS*RPVWAT
Trigger: TGTTGCCCAGACTGGTCTCAAACTCCTGGGTTCAAG...ACACATGCCTTGTATATTTGTCATCTGTGGCCTAAACTCTGCCCCTGAAGGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS TCA 90 bp TTCAGTTACCCTTGGTCAAGTAGAGTATTCTTGGTCAAGAGGTGCTaGGAGCTTTTGGCTCTTCTTCTGGCTGGACTGGATACCTTGGAA +
Preference number: 5 (lower is better)
Translates to: FSYPWSSRVFLVKRC*ELLALLLAGLDTLE
Trigger: TTCCAAGGTATCCAGTCCAGCCAGAAGAAGAGCCAAAAGCTCTCAGCACCTCTTGACCAAGAATACTCTACTTGACCAAGGGTAACTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450307.7
CDS-3UTR CAA 90 bp CATAGGTTACTGGTTTGCTCCCTAACTTTGTTCTGGACTCCAACATCTCTATTGGGGAGGATAATGGGTTaGGACCAGCTACTAGCAGAG +
Preference number: 5 (lower is better)
Translates to: HRLLVCSLTLFWTPTSLLGRIMG*DQLLAE
Trigger: CTCTGCTAGTAGCTGGTCCAAACCCATTATCCTCCC...CAATAGAGATGTTGGAGTCCAGAACAAAGTTAGGGAGCAAACCAGTAACCTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR CAA 90 bp CACCCTCTCGCTTCTCATGGATTCACCTGGAGATATGGAAATAGGGAACTCAGCCAAAGCAAGGGATTATaGATTCCACTAGACTATGCC +
Preference number: 5 (lower is better)
Translates to: HPLASHGFTWRYGNRELSQSKGL*IPLDYA
Trigger: GGCATAGTCTAGTGGAATCAATAATCCCTTGCTTTG...GCTGAGTTCCCTATTTCCATATCTCCAGGTGAATCCATGAGAAGCGAGAGGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR CAA 90 bp AGTACTTCGGGCAGCCTCTACCCATCAATCATGTTTAGTGTTTGGGATGAAAATCTTGAACCCAGGAGTTaGAGACCAGTCTGGGCAACA +
Preference number: 5 (lower is better)
Translates to: STSGSLYPSIMFSVWDENLEPRS*RPVWAT
Trigger: TGTTGCCCAGACTGGTCTCAAACTCCTGGGTTCAAG...ATTTTCATCCCAAACACTAAACATGATTGATGGGTAGAGGCTGCCCGAAGTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR CAA 90 bp GACCCAGGATTATTGGCCTCATTAAAAGATAATTTGCAGCTGGCATGGGTTTGTATCCTAGGGAAACAGTaGATGAGGCGCTGCAGAGAC +
Preference number: 5 (lower is better)
Translates to: DPGLLASLKDNLQLAWVCILGKQ*MRRCRD
Trigger: GTCTCTGCAGCGCCTCATCAACTGTTTCCCTAGGAT...ACAAACCCATGCCAGCTGCAAATTATCTTTTAATGAGGCCAATAATCCTGGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480005.1
CDS CCA 90 bp CTTTCATCTATGGTTTCAGTTACCCTTGGTCAAGTAGAGTATTCTTaGTCAAGAGGTGCTGAGAGCTTTTGGCTCTTCTTCTGGCTGGAC +
Preference number: 5 (lower is better)
Translates to: LSSMVSVTLGQVEYS*SRGAESFWLFFWLD
Trigger: GTCCAGCCAGAAGAAGAGCCAAAAGCTCTCAGCACCTCTTGACCAAGAATACTCTACTTGACCAAGGGTAACTGAAACCATAGATGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450307.7
CDS-3UTR CAA 90 bp CTTAAAAACAAACGTAATTGTAGGATCCTCTGTTACGACCAGCATAGGTTACTGGCTGGACTGGATACCTaGGAAGGAATCACGGTGGTG +
Preference number: 5 (lower is better)
Translates to: LKNKRNCRILCYDQHRLLAGLDT*EGITVV
Trigger: CACCACCGTGATTCCTTCCAAGGTATCCAGTCCAGC...CAGTAACCTATGCTGGTCGTAACAGAGGATCCTACAATTACGTTTGTTTTTAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR CAA 90 bp AGCAAGGGATTATTGATTCCACTAGACTATGCCACTTCAGAAAACATTAGCAGTGCTGGACTGGATACCTaGGAAGGAATCACGGTGGTG +
Preference number: 5 (lower is better)
Translates to: SKGLLIPLDYATSENISSAGLDT*EGITVV
Trigger: CACCACCGTGATTCCTTCCAAGGTATCCAGTCCAGC...ACTGCTAATGTTTTCTGAAGTGGCATAGTCTAGTGGAATCAATAATCCCTTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
ENST00000522977.5
CDS-3UTR CAA 90 bp AAACCTTCAGGGGCAGAGTTTAGGCCACAGATGACAAATATACAAGGCATGTGTTCTTCTTTTCAATGGTaGCCCCCAGAGACACACTCT +
Preference number: 5 (lower is better)
Translates to: KPSGAEFRPQMTNIQGMCSSFQW*PPETHS
Trigger: AGAGTGTGTCTCTGGGGGCAACCATTGAAAAGAAGA...ACACATGCCTTGTATATTTGTCATCTGTGGCCTAAACTCTGCCCCTGAAGGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR CAA 90 bp GCATTCTTCTATCTCAGATTCCATCTTTACACAGTACTTCGGGCAGCCTCTACCGTTTGCTCCCTAACTTaGTTCTGGACTCCAACATCT +
Preference number: 5 (lower is better)
Translates to: AFFYLRFHLYTVLRAASTVCSLT*FWTPTS
Trigger: AGATGTTGGAGTCCAGAACAAAGTTAGGGAGCAAAC...GGTAGAGGCTGCCCGAAGTACTGTGTAAAGATGGAATCTGAGATAGAAGAATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR CAA 90 bp TGCGTGTGGCTCAGTTTCAATCCTGAAGGTTTTTCCTCTTGTCCGGGGAACCTTATTCAAATCCCTTACTaGTTCCAACATATCAGAGTC +
Preference number: 5 (lower is better)
Translates to: CVWLSFNPEGFSSCPGNLIQIPY*FQHIRV
Trigger: GACTCTGATATGTTGGAACAAGTAAGGGATTTGAAT...AAGGTTCCCCGGACAAGAGGAAAAACCTTCAGGATTGAAACTGAGCCACACGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR CAA 90 bp CACCCTCTCGCTTCTCATGGATTCACCTGGAGATATGGAAATAGGGAACTCAGCATTCAAATCCCTTACTaGTTCCAACATATCAGAGTC +
Preference number: 5 (lower is better)
Translates to: HPLASHGFTWRYGNRELSIQIPY*FQHIRV
Trigger: GACTCTGATATGTTGGAACAAGTAAGGGATTTGAAT...GCTGAGTTCCCTATTTCCATATCTCCAGGTGAATCCATGAGAAGCGAGAGGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR CAA 90 bp AGTACTTCGGGCAGCCTCTACCCATCAATCATGTTTAGTGTTTGGGATGAAAATGCTCTAACACAGGCATaGAAGCCTGACACTCACATA +
Preference number: 5 (lower is better)
Translates to: STSGSLYPSIMFSVWDENALTQA*KPDTHI
Trigger: TATGTGAGTGTCAGGCTTCAATGCCTGTGTTAGAGC...ATTTTCATCCCAAACACTAAACATGATTGATGGGTAGAGGCTGCCCGAAGTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS TCA 90 bp CAGTTATGCTTTTCTAATAATCCTCAGGCCTGGAACAAAGAACACTaGGTCTCTCTTCATGGCACAGGAGAATCAGACATGACCAGAAGT +
Preference number: 5 (lower is better)
Translates to: QLCFSNNPQAWNKEH*VSLHGTGESDMTRS
Trigger: ACTTCTGGTCATGTCTGATTCTCCTGTGCCATGAAGAGAGACTCAGTGTTCTTTGTTCCAGGCCTGAGGATTATTAGAAAAGCATAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484919.5
CDS-3UTR CAA 90 bp TCACACATAGCAGTTGAGTCTGAGACCTGTAATGTGGCCAAACACTTCTTTGTACACAGATTTGATGTTTaGGGTTCAGAAATCCCCACG +
Preference number: 5 (lower is better)
Translates to: SHIAVESETCNVAKHFFVHRFDV*GSEIPT
Trigger: CGTGGGGATTTCTGAACCCAAAACATCAAATCTGTG...TACAAAGAAGTGTTTGGCCACATTACAGGTCTCAGACTCAACTGCTATGTGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR CAA 90 bp CCAGGATTATTGGCCTCATTAAAAGATAATTTGCAGCTGGCATGGGTTTGTGTTCACAGATTTGATGTTTaGGGTTCAGAAATCCCCACG +
Preference number: 5 (lower is better)
Translates to: PGLLASLKDNLQLAWVCVHRFDV*GSEIPT
Trigger: CGTGGGGATTTCTGAACCCAAAACATCAAATCTGTG...AACACAAACCCATGCCAGCTGCAAATTATCTTTTAATGAGGCCAATAATCCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480005.1
CDS-3UTR CAA 90 bp TTTGTACTTGACACACTTCTTAACCGGTGGGCAGGGGATCTTGAACTTACTCATGATTCCCACACAGATTaGATGTTTTGGGTTCAGAAA +
Preference number: 5 (lower is better)
Translates to: FVLDTLLNRWAGDLELTHDSHTD*MFWVQK
Trigger: TTTCTGAACCCAAAACATCAAATCTGTGTGGGAATC...ATGAGTAAGTTCAAGATCCCCTGCCCACCGGTTAAGAAGTGTGTCAAGTACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480005.1
CDS-3UTR CAA 90 bp TTCTGGACTCCAACATCTCTATTGAATGAGACTTTTGAACAGTCCTCTGGGATAAGGGGCAGTTTTATATaGCCTTCGAGGGACATTTCT +
Preference number: 5 (lower is better)
Translates to: FWTPTSLLNETFEQSSGIRGSFI*PSRDIS
Trigger: AGAAATGTCCCTCGAAGGCAATATAAAACTGCCCCT...TATCCCAGAGGACTGTTCAAAAGTCTCATTCAATAGAGATGTTGGAGTCCAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR CAA 90 bp ACAAACGTAATTGTAGGATCCTCTGTTACGACCAGCATAGGTTACTGGTTTGCTCAAAGCAAGGGATTATaGATTCCACTAGACTATGCC +
Preference number: 5 (lower is better)
Translates to: TNVIVGSSVTTSIGYWFAQSKGL*IPLDYA
Trigger: GGCATAGTCTAGTGGAATCAATAATCCCTTGCTTTG...AGCAAACCAGTAACCTATGCTGGTCGTAACAGAGGATCCTACAATTACGTTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR CAA 90 bp GTTTGCTCCCTAACTTTGTTCTGGACTCCAACATCTCTATTGAATGAGACTTTTTCTTCTTTTCAATGGTaGCCCCCAGAGACACACTCT +
Preference number: 5 (lower is better)
Translates to: VCSLTLFWTPTSLLNETFSSFQW*PPETHS
Trigger: AGAGTGTGTCTCTGGGGGCAACCATTGAAAAGAAGA...AAAAGTCTCATTCAATAGAGATGTTGGAGTCCAGAACAAAGTTAGGGAGCAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR CAA 90 bp GCATTCTTCTATCTCAGATTCCATCTTTACACAGTACTTCGGGCAGCCTCTACCATTCAAATCCCTTACTaGTTCCAACATATCAGAGTC +
Preference number: 5 (lower is better)
Translates to: AFFYLRFHLYTVLRAASTIQIPY*FQHIRV
Trigger: GACTCTGATATGTTGGAACAAGTAAGGGATTTGAAT...GGTAGAGGCTGCCCGAAGTACTGTGTAAAGATGGAATCTGAGATAGAAGAATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR CAA 90 bp AGTACTTCGGGCAGCCTCTACCCATCAATCATGTTTAGTGTTTGGGATGAAAATGATTCCCACACAGATTaGATGTTTTGGGTTCAGAAA +
Preference number: 5 (lower is better)
Translates to: STSGSLYPSIMFSVWDENDSHTD*MFWVQK
Trigger: TTTCTGAACCCAAAACATCAAATCTGTGTGGGAATC...ATTTTCATCCCAAACACTAAACATGATTGATGGGTAGAGGCTGCCCGAAGTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR CAA 90 bp TTAAAAACAAACGTAATTGTAGGATCCTCTGTTACGACCAGCATAGGTTACTGGAGGGGCAGTTTTATATaGCCTTCGAGGGACATTTCT +
Preference number: 5 (lower is better)
Translates to: LKTNVIVGSSVTTSIGYWRGSFI*PSRDIS
Trigger: AGAAATGTCCCTCGAAGGCAATATAAAACTGCCCCT...CCAGTAACCTATGCTGGTCGTAACAGAGGATCCTACAATTACGTTTGTTTTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR CAA 90 bp TTCTGGACTCCAACATCTCTATTGAATGAGACTTTTGAACAGTCCTCTGGGATAGATTCCCACACAGATTaGATGTTTTGGGTTCAGAAA +
Preference number: 5 (lower is better)
Translates to: FWTPTSLLNETFEQSSGIDSHTD*MFWVQK
Trigger: TTTCTGAACCCAAAACATCAAATCTGTGTGGGAATC...TATCCCAGAGGACTGTTCAAAAGTCTCATTCAATAGAGATGTTGGAGTCCAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS-3UTR CAA 90 bp CCATTGTGTTTACAAGTGCCTCAAAGTCCATTTACACTAGAAAATCACACACTTAGTCTAAAACAATGGTaGAAGAGCAGAGATAGCAAG +
Preference number: 5 (lower is better)
Translates to: PLCLQVPQSPFTLENHTLSLKQW*KSRDSK
Trigger: CTTGCTATCTCTGCTCTTCAACCATTGTTTTAGACT...AAGTGTGTGATTTTCTAGTGTAAATGGACTTTGAGGCACTTGTAAACACAATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
CDS CAA 72 bp TCCGGGGCACTGGCGGTATCGGGTCTGGCAGAGGCTTaGGCCGGGTGGGCTGTGGGCGGCCGCGCGGTCTGG +
Preference number: 6 (lower is better)
Translates to: SGALAVSGLAEA*AGWAVGGRAVW
Trigger: CCAGACCGCGCGGCCGCCCACAGCCCACCCGGCCAAAGCCTCTGCCAGACCCGATACCGCCAGTGCCCCGGA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522977.5
CDS GCA 72 bp CTGCCGGGCGGGGGAAACGCGGTTAGCCCACTCCTCTaGTCGGGCCTAGGGACCCATGGAACCCCAGGGCAG +
Preference number: 6 (lower is better)
Translates to: LPGGGNAVSPLL*SGLGTHGTPGQ
Trigger: CTGCCCTGGGGTTCCATGGGTCCCTAGGCCCGAGCAGAGGAGTGGGCTAACCGCGTTTCCCCCGCCCGGCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460144.5
CDS CCA 72 bp CTGCGGTCTCCGCGGTGGGGCAGCAGCTCCAGGGGCTaGTGCGTGTACAGGTCCGACTCGATCACCACATTC +
Preference number: 6 (lower is better)
Translates to: LRSPRWGSSSRG*CVYRSDSITTF
Trigger: GAATGTGGTGATCGAGTCGGACCTGTACACGCACCAGCCCCTGGAGCTGCTGCCCCACCGCGGAGACCGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000305454.8
ENST00000480005.1
ENST00000484919.5
ENST00000485639.1
ENST00000521495.5
ENST00000522977.5
CDS GCA 72 bp GGCCTAGGGACCCATGGAACCCCAGGGCAGGAGCTTTaGAGATGGAGCTCGCATCGAGGGAGTTTCTGGATC +
Preference number: 6 (lower is better)
Translates to: GLGTHGTPGQEL*RWSSHRGSFWI
Trigger: GATCCAGAAACTCCCTCGATGCGAGCTCCATCTGCAAAGCTCCTGCCCTGGGGTTCCATGGGTCCCTAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460144.5
CDS GCA 72 bp CAGGCTGTCTCTTTGTGGCCAAACGGAATCTCTCCCTaGCCCACTGTGCAATGGCCCTGTCAGCGGCTGACA +
Preference number: 6 (lower is better)
Translates to: QAVSLWPNGISP*PTVQWPCQRLT
Trigger: TGTCAGCCGCTGACAGGGCCATTGCACAGTGGGGCAGGGAGAGATTCCGTTTGGCCACAAAGAGACAGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488582.1
CDS CCA 72 bp TGGCCAAACGGAATCTCTCCCTGCCCCACTGTGCAATaGCCCTGTCAGCGGCTGACACAGGGGAAGAAAGGA +
Preference number: 6 (lower is better)
Translates to: WPNGISPCPTVQ*PCQRLTQGKKG
Trigger: TCCTTTCTTCCCCTGTGTCAGCCGCTGACAGGGCCATTGCACAGTGGGGCAGGGAGAGATTCCGTTTGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488582.1
CDS GCA 72 bp GCACTTACCCTCTCATCAGAACAGCTCCCTTCTCTGTaGCCATGGCTGTCGCCTCCAATGAGGCAGAGGCTG +
Preference number: 6 (lower is better)
Translates to: ALTLSSEQLPSL*PWLSPPMRQRL
Trigger: CAGCCTCTGCCTCATTGGAGGCGACAGCCATGGGCACAGAGAAGGGAGCTGTTCTGATGAGAGGGTAAGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480005.1
CDS GCA 72 bp ACCCAACCCTTCACCACCCTGAAACGCCTTTTCTGCTaGCTGCGGTGTGGAGGATGTAGTCCAGGGCATACA +
Preference number: 6 (lower is better)
Translates to: TQPFTTLKRLFC*LRCGGCSPGHT
Trigger: TGTATGCCCTGGACTACATCCTCCACACCGCAGGCAGCAGAAAAGGCGTTTCAGGGTGGTGAAGGGTTGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485639.1
CDS GCA 72 bp ATAACCCAACCCTTCACCACCCTGAAACGCCTTTTCTaGTGCCTGCGGTGTGGAGGATGTAGTCCAGGGCAT +
Preference number: 6 (lower is better)
Translates to: ITQPFTTLKRLF*CLRCGGCSPGH
Trigger: ATGCCCTGGACTACATCCTCCACACCGCAGGCAGCAGAAAAGGCGTTTCAGGGTGGTGAAGGGTTGGGTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485639.1
CDS GCA 72 bp TGGACTTTCAGAGTTTCCAGAGGGAATTCCAACTCCTaGACGTGGGCAGCAGACTCCCAGCTCTTTTCCCTC +
Preference number: 6 (lower is better)
Translates to: WTFRVSRGNSNS*TWAADSQLFSL
Trigger: GAGGGAAAAGAGCTGGGAGTCTGCTGCCCACGTGCAGGAGTTGGAATTCCCTCTGGAAACTCTGAAAGTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488582.1
CDS CCA 72 bp TGGTCAAGAGGTGCTGAGAGCTTTTGGCTCTTCTTCTaGCTGGACTGGATACCTTGGAAGGAATCACGGTGG +
Preference number: 6 (lower is better)
Translates to: WSRGAESFWLFF*LDWIPWKESRW
Trigger: CCACCGTGATTCCTTCCAAGGTATCCAGTCCAGCCAGAAGAAGAGCCAAAAGCTCTCAGCACCTCTTGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000305454.8
ENST00000450307.7
ENST00000460144.5
ENST00000480005.1
ENST00000484919.5
ENST00000485639.1
ENST00000521495.5
ENST00000521813.5
ENST00000522977.5
CDS TCA 72 bp AGGGGTAAGAGGAGTTCCACCCAAAAGCGAAACTGCTaGTTCCGAGGGTCAACTTGGACTTTCAGAGTTTCC +
Preference number: 6 (lower is better)
Translates to: RGKRSSTQKRNC*FRGSTWTFRVS
Trigger: GGAAACTCTGAAAGTCCAAGTTGACCCTCGGAATCAGCAGTTTCGCTTTTGGGTGGAACTCCTCTTACCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488582.1
CDS CCA 72 bp TCACCACATTCTTGGTCAAGAGGTGCTGAGAGCTTTTaGCTCTTCTTCTGGCTGGACTGGATACCTTGGAAG +
Preference number: 6 (lower is better)
Translates to: SPHSWSRGAESF*LFFWLDWIPWK
Trigger: CTTCCAAGGTATCCAGTCCAGCCAGAAGAAGAGCCAAAAGCTCTCAGCACCTCTTGACCAAGAATGTGGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000305454.8
ENST00000480005.1
ENST00000484919.5
ENST00000485639.1
ENST00000521495.5
ENST00000522977.5
CDS TCA 72 bp TGTGGAGGATGTAGTCCAGGGCATACAGGTATGTGCTaGATCGAGTTGAAGACTCACTGTCCTCTCATCAGA +
Preference number: 6 (lower is better)
Translates to: CGGCSPGHTGMC*IELKTHCPLIR
Trigger: TCTGATGAGAGGACAGTGAGTCTTCAACTCGATTCAGCACATACCTGTATGCCCTGGACTACATCCTCCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485639.1
CDS CCA 72 bp GTAGAGTATTCTTGGTCAAGAGGTGCTGAGAGCTTTTaGCTCTTCTTCTGGCTGGACTGGATACCTTGGAAG +
Preference number: 6 (lower is better)
Translates to: VEYSWSRGAESF*LFFWLDWIPWK
Trigger: CTTCCAAGGTATCCAGTCCAGCCAGAAGAAGAGCCAAAAGCTCTCAGCACCTCTTGACCAAGAATACTCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450307.7
CDS CAA 90 bp ACACGGGCTAACACACAAGCCTCAGGATCCCATCTGCTGACGTCTTaGATTCACACTTCTCCTTATTTGTCACCTAGATCTATTCTTGGT +
Preference number: 6 (lower is better)
Translates to: TRANTQASGSHLLTS*IHTSPYLSPRSILG
Trigger: ACCAAGAATAGATCTAGGTGACAAATAAGGAGAAGTGTGAATCAAAGACGTCAGCAGATGGGATCCTGAGGCTTGTGTGTTAGCCCGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521813.5
CDS CCA 72 bp ACAAAATATTCTTGGTCAAGAGGTGCTGAGAGCTTTTaGCTCTTCTTCTGGCTGGACTGGATACCTTGGAAG +
Preference number: 6 (lower is better)
Translates to: TKYSWSRGAESF*LFFWLDWIPWK
Trigger: CTTCCAAGGTATCCAGTCCAGCCAGAAGAAGAGCCAAAAGCTCTCAGCACCTCTTGACCAAGAATATTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460144.5
CDS CCA 72 bp ATGGTTTCAGTTACCCTTGGTCAAGTAGAGTATTCTTaGTCAAGAGGTGCTGAGAGCTTTTGGCTCTTCTTC +
Preference number: 6 (lower is better)
Translates to: MVSVTLGQVEYS*SRGAESFWLFF
Trigger: GAAGAAGAGCCAAAAGCTCTCAGCACCTCTTGACCAAGAATACTCTACTTGACCAAGGGTAACTGAAACCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450307.7
CDS CCA 72 bp TGGTCAAGAGGTGCTGAGAGCTTTTGGCTCTTCTTCTaGCTGGACTGGATAATATATAATTTTTCAGCCTGC +
Preference number: 6 (lower is better)
Translates to: WSRGAESFWLFF*LDWIIYNFSAC
Trigger: GCAGGCTGAAAAATTATATATTATCCAGTCCAGCCAGAAGAAGAGCCAAAAGCTCTCAGCACCTCTTGACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488582.1
CDS CAA 72 bp AACACACAAGCCTCAGGATCCCATCTGCTGACGTCTTaGATTCACACTTCTCCTTATTTGTCACCTAGATCT +
Preference number: 6 (lower is better)
Translates to: NTQASGSHLLTS*IHTSPYLSPRS
Trigger: AGATCTAGGTGACAAATAAGGAGAAGTGTGAATCAAAGACGTCAGCAGATGGGATCCTGAGGCTTGTGTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521813.5
CDS TCA 72 bp TTTTCTAATAATCCTCAGGCCTGGAACAAAGAACACTaGGTCTCTCTTCATGGCACAGGAGAATCAGACATG +
Preference number: 6 (lower is better)
Translates to: FSNNPQAWNKEH*VSLHGTGESDM
Trigger: CATGTCTGATTCTCCTGTGCCATGAAGAGAGACTCAGTGTTCTTTGTTCCAGGCCTGAGGATTATTAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484919.5
CDS TCA 72 bp CCTATGTTCACAGGCATACATCTAGTTTATTCCTGTTaGCATTGTATAGTATTCCACAGCATGACAGCACCA +
Preference number: 6 (lower is better)
Translates to: PMFTGIHLVYSC*HCIVFHSMTAP
Trigger: TGGTGCTGTCATGCTGTGGAATACTATACAATGTCAACAGGAATAAACTAGATGTATGCCTGTGAACATAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488582.1
CDS CAA 72 bp ACCTATGTTCACAGGCATACATCTAGTTTATTCCTGTaGACATTGTATAGTATTCCACAGCATGACAGCACC +
Preference number: 6 (lower is better)
Translates to: TYVHRHTSSLFL*TLYSIPQHDST
Trigger: GGTGCTGTCATGCTGTGGAATACTATACAATGTCAACAGGAATAAACTAGATGTATGCCTGTGAACATAGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488582.1