RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for VWDE (Homo sapiens)

Ensembl gene IDs: ENSG00000146530

Ensembl transcript IDs: ENST00000275358.8, ENST00000326715.4, ENST00000452576.6, ENST00000485526.1, ENST00000521169.5, ENST00000614403.4, ENST00000644150.1, ENST00000649524.1

Found 704 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGTTGGCTAGAGTCTCCTGACAGAGGGTCAAGGTGCTATACTCGGTaGGGCCAGAGGGAGTGGGCCAAGAGGGGAAAAACTCTTGCTGTA +
Preference number: 1 (lower is better)
Translates to: SWLESPDRGSRCYTR*GQREWAKRGKTLAV
Trigger: TACAGCAAGAGTTTTTCCCCTCTTGGCCCACTCCCTCTGGCCTCACCGAGTATAGCACCTTGACCCTCTGTCAGGAGACTCTAGCCAACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521169.5
3UTR CCA 90 bp CCTTCAACTGCCACTTCCCAGTTGGTTTCCCACCCACCAGATCCATaGTATCAAACTGCTGAACATCAGTGGGCAGCTGACAATCAACAG +
Preference number: 1 (lower is better)
Translates to: PSTATSQLVSHPPDP*YQTAEHQWAADNQQ
Trigger: CTGTTGATTGTCAGCTGCCCACTGATGTTCAGCAGTTTGATACCATGGATCTGGTGGGTGGGAAACCAACTGGGAAGTGGCAGTTGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521169.5
3UTR GCA 90 bp GTATTTGACACCGCACTCCTTCCCAGGAGGAAGGACAATGGCATATaGTGGGCGCAATGCATTCACCACCGTTTTTACATTTCTGCAAGC +
Preference number: 1 (lower is better)
Translates to: VFDTALLPRRKDNGI*WAQCIHHRFYISAS
Trigger: GCTTGCAGAAATGTAAAAACGGTGGTGAATGCATTGCGCCCAGCATATGCCATTGTCCTTCCTCCTGGGAAGGAGTGCGGTGTCAAATAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
3UTR CCA 90 bp CACAAAGCTGTACTACAGGTGGGTCCATACCAGCCAGGTTTGCACTaGCAAATATCTGGTGTAAGACACTGGCCTCCATTTTCACAGTGC +
Preference number: 1 (lower is better)
Translates to: HKAVLQVGPYQPGLH*QISGVRHWPPFSQC
Trigger: GCACTGTGAAAATGGAGGCCAGTGTCTTACACCAGATATTTGCCAGTGCAAACCTGGCTGGTATGGACCCACCTGTAGTACAGCTTTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
3UTR TCA 90 bp CATTTGGACAGAGGCAAGTATTTGGCTTATTACACGAACCACCATTaGGGCAGACAGGGTCGCACAAAGCTGTACTACAGGTGGGTCCAT +
Preference number: 1 (lower is better)
Translates to: HLDRGKYLAYYTNHH*GRQGRTKLYYRWVH
Trigger: ATGGACCCACCTGTAGTACAGCTTTGTGCGACCCTGTCTGCCTCAATGGTGGTTCGTGTAATAAGCCAAATACTTGCCTCTGTCCAAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
3UTR GCA 90 bp CACTGTCTAATCTCTTGCCAAGAAAAGCAAGACACAGCCTTCCTATaGTGGAGTTGGCTAGAGTCTCCTGACAGAGGGTCAAGGTGCTAT +
Preference number: 1 (lower is better)
Translates to: HCLISCQEKQDTAFL*WSWLESPDRGSRCY
Trigger: ATAGCACCTTGACCCTCTGTCAGGAGACTCTAGCCAACTCCAGCATAGGAAGGCTGTGTCTTGCTTTTCTTGGCAAGAGATTAGACAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521169.5
3UTR CCA 90 bp ACTACAGGTGGGTCCATACCAGCCAGGTTTGCACTGGCAAATATCTaGTGTAAGACACTGGCCTCCATTTTCACAGTGCCTGTTACAAAC +
Preference number: 1 (lower is better)
Translates to: TTGGSIPARFALANI*CKTLASIFTVPVTN
Trigger: GTTTGTAACAGGCACTGTGAAAATGGAGGCCAGTGTCTTACACCAGATATTTGCCAGTGCAAACCTGGCTGGTATGGACCCACCTGTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
3UTR CCA 90 bp GTTGCATCGTTTCCCACTCCAACCAGAAGGACAAGAGCAAGTGCTTaGTCCCACACATTTTCCTCCATTCATGCACGTAGGATCACAGAT +
Preference number: 1 (lower is better)
Translates to: VASFPTPTRRTRASA*SHTFSSIHARRITD
Trigger: ATCTGTGATCCTACGTGCATGAATGGAGGAAAATGTGTGGGACCAAGCACTTGCTCTTGTCCTTCTGGTTGGAGTGGGAAACGATGCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
3UTR GCA 90 bp TCCTACCAGTGTATCCTTCACGACAGACGCACACATTATTTCTCATaGAGTGGCCACCATTCTTACAGGGAGGGTGACAGAAAGCATTCT +
Preference number: 1 (lower is better)
Translates to: SYQCILHDRRTHYFS*SGHHSYREGDRKHS
Trigger: AGAATGCTTTCTGTCACCCTCCCTGTAAGAATGGTGGCCACTGCATGAGAAATAATGTGTGCGTCTGTCGTGAAGGATACACTGGTAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
3UTR CCA 90 bp CTGACAGTGTTCCCCAAAGAATCCATTTGGACAGAGGCAAGTATTTaGCTTATTACACGAACCACCATTGAGGCAGACAGGGTCGCACAA +
Preference number: 1 (lower is better)
Translates to: LTVFPKESIWTEASI*LITRTTIEADRVAQ
Trigger: TTGTGCGACCCTGTCTGCCTCAATGGTGGTTCGTGTAATAAGCCAAATACTTGCCTCTGTCCAAATGGATTCTTTGGGGAACACTGTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
3UTR CCA 90 bp TGTCTAATCTCTTGCCAAGAAAAGCAAGACACAGCCTTCCTATGCTaGAGTTGGCTAGAGTCTCCTGACAGAGGGTCAAGGTGCTATACT +
Preference number: 1 (lower is better)
Translates to: CLISCQEKQDTAFLC*SWLESPDRGSRCYT
Trigger: AGTATAGCACCTTGACCCTCTGTCAGGAGACTCTAGCCAACTCCAGCATAGGAAGGCTGTGTCTTGCTTTTCTTGGCAAGAGATTAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521169.5
3UTR GCA 90 bp AAACCATTGTTTCACACCTTGGTCCTACAAAACCATAAGGACAAGTaGAGAGATTCCCAGCCAAGCATGTGCCACCATGTTGACAAGGTG +
Preference number: 1 (lower is better)
Translates to: KPLFHTLVLQNHKDK*RDSQPSMCHHVDKV
Trigger: CACCTTGTCAACATGGTGGCACATGCTTGGCTGGGAATCTCTGCACTTGTCCTTATGGTTTTGTAGGACCAAGGTGTGAAACAATGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
3UTR GCA 90 bp TATCAAACTGCTGAACATCAGTGGGCAGCTGACAATCAACAGCTCTaGTATTGTGGAAAACAGTCTGTGTATAGATGGGTTCTCCAGGCA +
Preference number: 1 (lower is better)
Translates to: YQTAEHQWAADNQQL*YCGKQSVYRWVLQA
Trigger: TGCCTGGAGAACCCATCTATACACAGACTGTTTTCCACAATAGCAGAGCTGTTGATTGTCAGCTGCCCACTGATGTTCAGCAGTTTGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521169.5
3UTR TCA 90 bp TCCGTTTGGCTGAGACTCGGGAAAGCAAACAAAGGAGGAAACTCATaGAAGTTCTGCCGTTTCCATCTGTTTTGTCGATTGTACCTCATT +
Preference number: 1 (lower is better)
Translates to: SVWLRLGKANKGGNS*KFCRFHLFCRLYLI
Trigger: AATGAGGTACAATCGACAAAACAGATGGAAACGGCAGAACTTTCATGAGTTTCCTCCTTTGTTTGCTTTCCCGAGTCTCAGCCAAACGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521169.5
3UTR CCA 90 bp AGGGTGACAGAAAGCATTCTGACAGTGTTCCCCAAAGAATCCATTTaGACAGAGGCAAGTATTTGGCTTATTACACGAACCACCATTGAG +
Preference number: 1 (lower is better)
Translates to: RVTESILTVFPKESI*TEASIWLITRTTIE
Trigger: CTCAATGGTGGTTCGTGTAATAAGCCAAATACTTGCCTCTGTCCAAATGGATTCTTTGGGGAACACTGTCAGAATGCTTTCTGTCACCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
3UTR CCA 90 bp AAGTTCTGCCGTTTCCATCTGTTTTGTCGATTGTACCTCATTTCTTaGCTGTGGCTTCCCCGGCCTTGTGTATATTTCTTATTGGCCAAA +
Preference number: 1 (lower is better)
Translates to: KFCRFHLFCRLYLIS*LWLPRPCVYFLLAK
Trigger: TTTGGCCAATAAGAAATATACACAAGGCCGGGGAAGCCACAGCCAAGAAATGAGGTACAATCGACAAAACAGATGGAAACGGCAGAACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521169.5
3UTR CCA 90 bp CCCTTCAGGACCAGAGTCCAACGTAAAATGGATGTCAGAACCTTCTaGATCGAAGGCCACGAACTGATACTCAAAGTTTTCACCATAAAA +
Preference number: 1 (lower is better)
Translates to: PFRTRVQRKMDVRTF*IEGHELILKVFTIK
Trigger: TTTTATGGTGAAAACTTTGAGTATCAGTTCGTGGCCTTCGATCCAGAAGGTTCTGACATCCATTTTACGTTGGACTCTGGTCCTGAAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521169.5
3UTR CCA 90 bp TGCCGTTTCCATCTGTTTTGTCGATTGTACCTCATTTCTTGGCTGTaGCTTCCCCGGCCTTGTGTATATTTCTTATTGGCCAAATATTGT +
Preference number: 1 (lower is better)
Translates to: CRFHLFCRLYLISWL*LPRPCVYFLLAKYC
Trigger: ACAATATTTGGCCAATAAGAAATATACACAAGGCCGGGGAAGCCACAGCCAAGAAATGAGGTACAATCGACAAAACAGATGGAAACGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521169.5
3UTR TCA 90 bp TCGGAGGTGACATCTAGTTCTGGTATCAAAGAAGATAAGCTGACATaGTTGAGGTCTTTGCAACCCAAGGCAATTTCTGATCGAGAAACA +
Preference number: 1 (lower is better)
Translates to: SEVTSSSGIKEDKLT*LRSLQPKAISDRET
Trigger: TGTTTCTCGATCAGAAATTGCCTTGGGTTGCAAAGACCTCAATCATGTCAGCTTATCTTCTTTGATACCAGAACTAGATGTCACCTCCGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521169.5
3UTR CCA 90 bp TTGGCAGTTAGAACCAATGTAACCAGGTTTACATTTGCAGATGTTTaGGGCAACACACTCCCTACTTTTTCCACATGGATATTTACAAAT +
Preference number: 1 (lower is better)
Translates to: LAVRTNVTRFTFADV*GNTLPTFSTWIFTN
Trigger: ATTTGTAAATATCCATGTGGAAAAAGTAGGGAGTGTGTTGCCCCAAACATCTGCAAATGTAAACCTGGTTACATTGGTTCTAACTGCCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
3UTR GCA 90 bp GGATATTTACAAATGGTGAAGGCATTTCCACTTGTTGGCTTAACATaGCTCTTTCTCCCTTGGGCATTTTTATCATCCTCTTCTTTATTT +
Preference number: 1 (lower is better)
Translates to: GYLQMVKAFPLVGLT*LFLPWAFLSSSSLF
Trigger: AAATAAAGAAGAGGATGATAAAAATGCCCAAGGGAGAAAGAGGCATGTTAAGCCAACAAGTGGAAATGCCTTCACCATTTGTAAATATCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
3UTR CCA 90 bp TCAGCCAAGAAGAAGAAATGTGAATTGCTTTGGCAATCGTCAGTTTaGCCGAGTATTAGTAATATGATTGGGCTAAAATTTGATGTCAAC +
Preference number: 1 (lower is better)
Translates to: SAKKKKCELLWQSSV*PSISNMIGLKFDVN
Trigger: GTTGACATCAAATTTTAGCCCAATCATATTACTAATACTCGGCCAAACTGACGATTGCCAAAGCAATTCACATTTCTTCTTCTTGGCTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326715.4
3UTR-3UTR TCA 90 bp ATCATTAGATACCTTCAACTGCCACTTCCCAGTTGGTTTCCCACCCACCAGATCAGGTGCTATACTCGGTaGGGCCAGAGGGAGTGGGCC +
Preference number: 2 (lower is better)
Translates to: IIRYLQLPLPSWFPTHQIRCYTR*GQREWA
Trigger: GGCCCACTCCCTCTGGCCTCACCGAGTATAGCACCT...GATCTGGTGGGTGGGAAACCAACTGGGAAGTGGCAGTTGAAGGTATCTAATGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521169.5
3UTR-3UTR GCA 90 bp AGGAAGGACAATGGCATATGCTGGGCGCAATGCATTCACCACCGTTTTTACATTCACACCCCCATTCCATaGACTGCCCATTGCCGCTGC +
Preference number: 2 (lower is better)
Translates to: RKDNGICWAQCIHHRFYIHTPIP*TAHCRC
Trigger: GCAGCGGCAATGGGCAGTGCATGGAATGGGGGTGTG...AATGTAAAAACGGTGGTGAATGCATTGCGCCCAGCATATGCCATTGTCCTTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000521169.5
3UTR CAA 90 bp GGGTCGCACAAAGCTGTACTACAGGTGGGTCCATACCAGCCAGGTTaGCACTGGCAAATATCTGGTGTAAGACACTGGCCTCCATTTTCA +
Preference number: 2 (lower is better)
Translates to: GSHKAVLQVGPYQPG*HWQISGVRHWPPFS
Trigger: TGAAAATGGAGGCCAGTGTCTTACACCAGATATTTGCCAGTGCAAACCTGGCTGGTATGGACCCACCTGTAGTACAGCTTTGTGCGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
3UTR-3UTR TCA 90 bp CAGCCAAGAAGAAGAAATGTGAATTGCTTTGGCAATCGTCAGTTTGGCCGAGTAAGGTGGAGGTGGCAATaGGGCAGCCAGCTGACGAAC +
Preference number: 2 (lower is better)
Translates to: QPRRRNVNCFGNRQFGRVRWRWQ*GSQLTN
Trigger: GTTCGTCAGCTGGCTGCCTCATTGCCACCTCCACCT...TACTCGGCCAAACTGACGATTGCCAAAGCAATTCACATTTCTTCTTCTTGGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326715.4
3UTR-3UTR TCA 90 bp CTACAGGTGGGTCCATACCAGCCAGGTTTGCACTGGCAAATATCTGGTGTAAGACCAGATCCGTTTGGCTaGGACTCGGGAAAGCAAACA +
Preference number: 2 (lower is better)
Translates to: LQVGPYQPGLHWQISGVRPDPFG*DSGKQT
Trigger: TGTTTGCTTTCCCGAGTCTCAGCCAAACGGATCTGG...TCTTACACCAGATATTTGCCAGTGCAAACCTGGCTGGTATGGACCCACCTGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521169.5
3UTR-3UTR TCA 90 bp AGACAGGGTCGCACAAAGCTGTACTACAGGTGGGTCCATACCAGCCAGGTTTGCACTGTGTTTCAACTTTaGGCTCAGGTGGACAATCAC +
Preference number: 2 (lower is better)
Translates to: RQGRTKLYYRWVHTSQVCTVFQL*AQVDNH
Trigger: GTGATTGTCCACCTGAGCTCAAAGTTGAAACACAGT...GCAAACCTGGCTGGTATGGACCCACCTGTAGTACAGCTTTGTGCGACCCTGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521169.5
3UTR-3UTR GCA 90 bp CAGACAGGGTCGCACAAAGCTGTACTACAGGTGGGTCCATACCAGCCAGGTTTGAAGGACAAGAGCAAGTaGTTGGTCCCACACATTTTC +
Preference number: 2 (lower is better)
Translates to: QTGSHKAVLQVGPYQPGLKDKSK*LVPHIF
Trigger: GAAAATGTGTGGGACCAAGCACTTGCTCTTGTCCTT...CAAACCTGGCTGGTATGGACCCACCTGTAGTACAGCTTTGTGCGACCCTGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
3UTR-3UTR GCA 90 bp CAGACAGGGTCGCACAAAGCTGTACTACAGGTGGGTCCATACCAGCCAGGTTTGATATGCTGGGCGCAATaGATTCACCACCGTTTTTAC +
Preference number: 2 (lower is better)
Translates to: QTGSHKAVLQVGPYQPGLICWAQ*IHHRFY
Trigger: GTAAAAACGGTGGTGAATGCATTGCGCCCAGCATAT...CAAACCTGGCTGGTATGGACCCACCTGTAGTACAGCTTTGTGCGACCCTGTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
3UTR CAA 90 bp CCATTTGGACAGAGGCAAGTATTTGGCTTATTACACGAACCACCATaGAGGCAGACAGGGTCGCACAAAGCTGTACTACAGGTGGGTCCA +
Preference number: 2 (lower is better)
Translates to: PFGQRQVFGLLHEPP*RQTGSHKAVLQVGP
Trigger: TGGACCCACCTGTAGTACAGCTTTGTGCGACCCTGTCTGCCTCAATGGTGGTTCGTGTAATAAGCCAAATACTTGCCTCTGTCCAAATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
3UTR-3UTR TCA 90 bp CTACAGGTGGGTCCATACCAGCCAGGTTTGCACTGGCAAATATCTGGTGTAAGAGGATGGCTTTCCAGGTaGTGTCATAGAAACTGGCAG +
Preference number: 2 (lower is better)
Translates to: LQVGPYQPGLHWQISGVRGWLSR*CHRNWQ
Trigger: CTGCCAGTTTCTATGACATCACCTGGAAAGCCATCC...TCTTACACCAGATATTTGCCAGTGCAAACCTGGCTGGTATGGACCCACCTGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521169.5
3UTR-3UTR GCA 90 bp AGACAGGGTCGCACAAAGCTGTACTACAGGTGGGTCCATACCAGCCAGGTTTGCTTAGATACCTTCAACTaGCACTTCCCAGTTGGTTTC +
Preference number: 2 (lower is better)
Translates to: RQGRTKLYYRWVHTSQVCLDTFN*HFPVGF
Trigger: GAAACCAACTGGGAAGTGGCAGTTGAAGGTATCTAA...GCAAACCTGGCTGGTATGGACCCACCTGTAGTACAGCTTTGTGCGACCCTGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521169.5
3UTR-3UTR CCA 90 bp TATTTGACACCGCACTCCTTCCCAGGAGGAAGGACAATGGCATATGCTGGGCGCTTATTTCTCATGCAGTaGCCACCATTCTTACAGGGA +
Preference number: 2 (lower is better)
Translates to: YLTPHSFPGGRTMAYAGRLFLMQ*PPFLQG
Trigger: TCCCTGTAAGAATGGTGGCCACTGCATGAGAAATAA...GCGCCCAGCATATGCCATTGTCCTTCCTCCTGGGAAGGAGTGCGGTGTCAAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
3UTR-3UTR CCA 90 bp CAGACAGGGTCGCACAAAGCTGTACTACAGGTGGGTCCATACCAGCCAGGTTTGGAGTCCAACGTAAAATaGATGTCAGAACCTTCTGGA +
Preference number: 2 (lower is better)
Translates to: QTGSHKAVLQVGPYQPGLESNVK*MSEPSG
Trigger: TCCAGAAGGTTCTGACATCCATTTTACGTTGGACTC...CAAACCTGGCTGGTATGGACCCACCTGTAGTACAGCTTTGTGCGACCCTGTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521169.5
3UTR CAA 90 bp ATAAGGACAAGTGCAGAGATTCCCAGCCAAGCATGTGCCACCATGTaGACAAGGTGGGTTACAATGTTCTTCATCACAGGTTGCTCCACC +
Preference number: 2 (lower is better)
Translates to: IRTSAEIPSQACATM*TRWVTMFFITGCST
Trigger: GGTGGAGCAACCTGTGATGAAGAACATTGTAACCCACCTTGTCAACATGGTGGCACATGCTTGGCTGGGAATCTCTGCACTTGTCCTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
3UTR-3UTR TCA 90 bp TATTTGACACCGCACTCCTTCCCAGGAGGAAGGACAATGGCATATGCTGGGCGCTGTCCTGGAAGACACTaGCAAATGTTAGGCTTAATA +
Preference number: 2 (lower is better)
Translates to: YLTPHSFPGGRTMAYAGRCPGRH*QMLGLI
Trigger: TATTAAGCCTAACATTTGTCAGTGTCTTCCAGGACA...GCGCCCAGCATATGCCATTGTCCTTCCTCCTGGGAAGGAGTGCGGTGTCAAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
3UTR-3UTR TCA 90 bp ATTATTTCTCATGCAGTGGCCACCATTCTTACAGGGAGGGTGACAGAAAGCATTTACACGAACCACCATTaGGGCAGACAGGGTCGCACA +
Preference number: 2 (lower is better)
Translates to: IISHAVATILTGRVTESIYTNHH*GRQGRT
Trigger: TGTGCGACCCTGTCTGCCTCAATGGTGGTTCGTGTA...AATGCTTTCTGTCACCCTCCCTGTAAGAATGGTGGCCACTGCATGAGAAATAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
3UTR-3UTR GCA 90 bp AATTGGTATTTGACACCGCACTCCTTCCCAGGAGGAAGGACAATGGCATATGCTCTGCTTCTGTCCCTTTaGTCCTGCTGTTGGTTTTGC +
Preference number: 2 (lower is better)
Translates to: NWYLTPHSFPGGRTMAYALLLSL*SCCWFC
Trigger: GCAAAACCAACAGCAGGAGCAAAGGGACAGAAGCAG...AGCATATGCCATTGTCCTTCCTCCTGGGAAGGAGTGCGGTGTCAAATACCAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452576.6
3UTR-3UTR GCA 90 bp CAGTGTATCCTTCACGACAGACGCACACATTATTTCTCATGCAGTGGCCACCATTGCTGTGATGTTGCCTaGTTCTGTCCCTTTGCTCCT +
Preference number: 2 (lower is better)
Translates to: QCILHDRRTHYFSCSGHHCCDVA*FCPFAP
Trigger: AGGAGCAAAGGGACAGAAGCAGGCAACATCACAGCA...ATGGTGGCCACTGCATGAGAAATAATGTGTGCGTCTGTCGTGAAGGATACACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452576.6
3UTR-3UTR GCA 90 bp CCCAGTTGGTTTCCCACCCACCAGATCCATGGTATCAAACTGCTGAACATCAGTTTCTTCATCACAGGTTaGTCCACCATGTCCTGGAAG +
Preference number: 2 (lower is better)
Translates to: PSWFPTHQIHGIKLLNISFFITG*STMSWK
Trigger: CTTCCAGGACATGGTGGAGCAACCTGTGATGAAGAA...ACTGATGTTCAGCAGTTTGATACCATGGATCTGGTGGGTGGGAAACCAACTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521169.5
3UTR-3UTR GCA 90 bp CAGACAGGGTCGCACAAAGCTGTACTACAGGTGGGTCCATACCAGCCAGGTTTGACACATTGGGAAATATaGATCTGCCTCCATAAAGAC +
Preference number: 2 (lower is better)
Translates to: QTGSHKAVLQVGPYQPGLTHWEI*ICLHKD
Trigger: GTCTTTATGGAGGCAGATGCATATTTCCCAATGTGT...CAAACCTGGCTGGTATGGACCCACCTGTAGTACAGCTTTGTGCGACCCTGTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
3UTR-3UTR GCA 90 bp CCCAGTTGGTTTCCCACCCACCAGATCCATGGTATCAAACTGCTGAACATCAGTGGCCACACCTGCTTCTaGCCAACTAAGATCATCTTT +
Preference number: 2 (lower is better)
Translates to: PSWFPTHQIHGIKLLNISGHTCF*PTKIIF
Trigger: AAAGATGATCTTAGTTGGGCAGAAGCAGGTGTGGCC...ACTGATGTTCAGCAGTTTGATACCATGGATCTGGTGGGTGGGAAACCAACTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521169.5
3UTR-3UTR CCA 90 bp CAGTGTATCCTTCACGACAGACGCACACATTATTTCTCATGCAGTGGCCACCATGCACTGGCAAATATCTaGTGTAAGACACTGGCCTCC +
Preference number: 2 (lower is better)
Translates to: QCILHDRRTHYFSCSGHHALANI*CKTLAS
Trigger: GGAGGCCAGTGTCTTACACCAGATATTTGCCAGTGC...ATGGTGGCCACTGCATGAGAAATAATGTGTGCGTCTGTCGTGAAGGATACACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
3UTR-3UTR TCA 90 bp GGACAATGGCATATGCTGGGCGCAATGCATTCACCACCGTTTTTACATTTCTGCCATGTGCCACCATGTTaGCAAGGTGGGTTACAATGT +
Preference number: 2 (lower is better)
Translates to: GQWHMLGAMHSPPFLHFCHVPPC*QGGLQC
Trigger: ACATTGTAACCCACCTTGTCAACATGGTGGCACATG...GCAGAAATGTAAAAACGGTGGTGAATGCATTGCGCCCAGCATATGCCATTGTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
3UTR-3UTR GCA 90 bp ATTTCTCATGCAGTGGCCACCATTCTTACAGGGAGGGTGACAGAAAGCATTCTGTTCTTCATCACAGGTTaGTCCACCATGTCCTGGAAG +
Preference number: 2 (lower is better)
Translates to: ISHAVATILTGRVTESILFFITG*STMSWK
Trigger: CTTCCAGGACATGGTGGAGCAACCTGTGATGAAGAA...CAGAATGCTTTCTGTCACCCTCCCTGTAAGAATGGTGGCCACTGCATGAGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
3UTR-3UTR GCA 90 bp GCCTCCATAAAGACATTTTGGGTTGCAAATTGGTATTTGACACCGCACTCCTTCTCCCAGCCAAGCATGTaGCACCATGTTGACAAGGTG +
Preference number: 2 (lower is better)
Translates to: ASIKTFWVANWYLTPHSFSQPSM*HHVDKV
Trigger: CACCTTGTCAACATGGTGGCACATGCTTGGCTGGGA...GAAGGAGTGCGGTGTCAAATACCAATTTGCAACCCAAAATGTCTTTATGGAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
3UTR-3UTR GCA 90 bp AGGTGGGTTACAATGTTCTTCATCACAGGTTGCTCCACCATGTCCTGGAAGACAGAGGGGAAAAACTCTTaGTGTACATCCTCAGCATGG +
Preference number: 2 (lower is better)
Translates to: RWVTMFFITGCSTMSWKTEGKNS*CTSSAW
Trigger: CCATGCTGAGGATGTACAGCAAGAGTTTTTCCCCTC...TGTCTTCCAGGACATGGTGGAGCAACCTGTGATGAAGAACATTGTAACCCACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521169.5
3UTR-3UTR GCA 90 bp TGGCAAATATCTGGTGTAAGACACTGGCCTCCATTTTCACAGTGCCTGTTACAACCCCATTCCATGCACTaGCCATTGCCGCTGCATAAA +
Preference number: 2 (lower is better)
Translates to: WQISGVRHWPPFSQCLLQPHSMH*PLPLHK
Trigger: TTTATGCAGCGGCAATGGGCAGTGCATGGAATGGGG...TTGTAACAGGCACTGTGAAAATGGAGGCCAGTGTCTTACACCAGATATTTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521169.5
3UTR-3UTR CCA 90 bp TGTATGCTTTCAGCCAAGAAGAAGAAATGTGAATTGCTTTGGCAATCGTCAGTTCTCCACCAGAACCTCTaGCCTTCCTGCAGGTGGAGG +
Preference number: 2 (lower is better)
Translates to: CMLSAKKKKCELLWQSSVLHQNL*PSCRWR
Trigger: CCTCCACCTGCAGGAAGGCCAGAGGTTCTGGTGGAG...AACTGACGATTGCCAAAGCAATTCACATTTCTTCTTCTTGGCTGAAAGCATACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326715.4
3UTR-3UTR CCA 90 bp TCTCATGCAGTGGCCACCATTCTTACAGGGAGGGTGACAGAAAGCATTCTGACACAGCCAGGTTTGCACTaGCAAATATCTGGTGTAAGA +
Preference number: 2 (lower is better)
Translates to: SHAVATILTGRVTESILTQPGLH*QISGVR
Trigger: TCTTACACCAGATATTTGCCAGTGCAAACCTGGCTG...TGTCAGAATGCTTTCTGTCACCCTCCCTGTAAGAATGGTGGCCACTGCATGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
3UTR-3UTR CCA 90 bp AGGAAGGACAATGGCATATGCTGGGCGCAATGCATTCACCACCGTTTTTACATTAAGCTGTACTACAGGTaGGTCCATACCAGCCAGGTT +
Preference number: 2 (lower is better)
Translates to: RKDNGICWAQCIHHRFYIKLYYR*VHTSQV
Trigger: AACCTGGCTGGTATGGACCCACCTGTAGTACAGCTT...AATGTAAAAACGGTGGTGAATGCATTGCGCCCAGCATATGCCATTGTCCTTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
3UTR-3UTR CCA 90 bp AATTGGTATTTGACACCGCACTCCTTCCCAGGAGGAAGGACAATGGCATATGCTACAAGAGCAAGTGCTTaGTCCCACACATTTTCCTCC +
Preference number: 2 (lower is better)
Translates to: NWYLTPHSFPGGRTMAYATRASA*SHTFSS
Trigger: GGAGGAAAATGTGTGGGACCAAGCACTTGCTCTTGT...AGCATATGCCATTGTCCTTCCTCCTGGGAAGGAGTGCGGTGTCAAATACCAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
3UTR-3UTR CCA 90 bp GACAATGGCATATGCTGGGCGCAATGCATTCACCACCGTTTTTACATTTCTGCACCACAAGGGTTGGATTaGCACCCACTAATGTCCACT +
Preference number: 2 (lower is better)
Translates to: DNGICWAQCIHHRFYISAPQGLD*HPLMST
Trigger: AGTGGACATTAGTGGGTGCCAATCCAACCCTTGTGG...TGCAGAAATGTAAAAACGGTGGTGAATGCATTGCGCCCAGCATATGCCATTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521169.5
3UTR CAA 90 bp AAACAAAGGAGGAAACTCATGAAAGTTCTGCCGTTTCCATCTGTTTaGTCGATTGTACCTCATTTCTTGGCTGTGGCTTCCCCGGCCTTG +
Preference number: 2 (lower is better)
Translates to: KQRRKLMKVLPFPSV*SIVPHFLAVASPAL
Trigger: CAAGGCCGGGGAAGCCACAGCCAAGAAATGAGGTACAATCGACAAAACAGATGGAAACGGCAGAACTTTCATGAGTTTCCTCCTTTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521169.5
3UTR-3UTR CCA 90 bp TCAATCAACTCCACCAGAACCTCTGGCCTTCCTGCAGGTGGAGGTGGCAATGAGAATCATTATGTCCAGTaGAAAAATGTGAGATGTCTG +
Preference number: 2 (lower is better)
Translates to: SINSTRTSGLPAGGGGNENHYVQ*KNVRCL
Trigger: CAGACATCTCACATTTTTCCACTGGACATAATGATT...CTCATTGCCACCTCCACCTGCAGGAAGGCCAGAGGTTCTGGTGGAGTTGATTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326715.4
3UTR-3UTR TCA 90 bp GCCTCCATAAAGACATTTTGGGTTGCAAATTGGTATTTGACACCGCACTCCTTCACCCAAGGCAATTTCTaGTCGAGAAACACTGTCCAG +
Preference number: 2 (lower is better)
Translates to: ASIKTFWVANWYLTPHSFTQGNF*SRNTVQ
Trigger: CTGGACAGTGTTTCTCGATCAGAAATTGCCTTGGGT...GAAGGAGTGCGGTGTCAAATACCAATTTGCAACCCAAAATGTCTTTATGGAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521169.5
3UTR-3UTR GCA 90 bp AATTGGTATTTGACACCGCACTCCTTCCCAGGAGGAAGGACAATGGCATATGCTAACCAGGTTTACATTTaGAGATGTTTGGGGCAACAC +
Preference number: 2 (lower is better)
Translates to: NWYLTPHSFPGGRTMAYANQVYI*RCLGQH
Trigger: GTGTTGCCCCAAACATCTGCAAATGTAAACCTGGTT...AGCATATGCCATTGTCCTTCCTCCTGGGAAGGAGTGCGGTGTCAAATACCAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
3UTR-3UTR GCA 90 bp GACAATGGCATATGCTGGGCGCAATGCATTCACCACCGTTTTTACATTTCTGCAACTGCCCATTGCCGCTaGATAAATTGGGGCATTTTA +
Preference number: 2 (lower is better)
Translates to: DNGICWAQCIHHRFYISATAHCR*INWGIL
Trigger: TAAAATGCCCCAATTTATGCAGCGGCAATGGGCAGT...TGCAGAAATGTAAAAACGGTGGTGAATGCATTGCGCCCAGCATATGCCATTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000521169.5
3UTR-3UTR CCA 90 bp CTTCTCACATTTGACTCCAGAGTATTCAGTGCGGCAGGAACACACATTGGGAAAACATTTGCAGATGTTTaGGGCAACACACTCCCTACT +
Preference number: 2 (lower is better)
Translates to: LLTFDSRVFSAAGTHIGKTFADV*GNTLPT
Trigger: AGTAGGGAGTGTGTTGCCCCAAACATCTGCAAATGT...TTTCCCAATGTGTGTTCCTGCCGCACTGAATACTCTGGAGTCAAATGTGAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
3UTR-3UTR CCA 90 bp ATTTCTCATGCAGTGGCCACCATTCTTACAGGGAGGGTGACAGAAAGCATTCTGACAGAGGCAAGTATTTaGCTTATTACACGAACCACC +
Preference number: 2 (lower is better)
Translates to: ISHAVATILTGRVTESILTEASI*LITRTT
Trigger: GGTGGTTCGTGTAATAAGCCAAATACTTGCCTCTGT...CAGAATGCTTTCTGTCACCCTCCCTGTAAGAATGGTGGCCACTGCATGAGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
3UTR-3UTR CCA 90 bp TTACATTTCTGCAAGCAGATAGGTGTGTTGCATCGTTTCCCACTCCAACCAGAAACAAGAGCAAGTGCTTaGTCCCACACATTTTCCTCC +
Preference number: 2 (lower is better)
Translates to: LHFCKQIGVLHRFPLQPETRASA*SHTFSS
Trigger: GGAGGAAAATGTGTGGGACCAAGCACTTGCTCTTGT...TTCTGGTTGGAGTGGGAAACGATGCAACACACCTATCTGCTTGCAGAAATGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
3UTR CAA 90 bp AAAGTTCTGCCGTTTCCATCTGTTTTGTCGATTGTACCTCATTTCTaGGCTGTGGCTTCCCCGGCCTTGTGTATATTTCTTATTGGCCAA +
Preference number: 2 (lower is better)
Translates to: KVLPFPSVLSIVPHF*AVASPALCIFLIGQ
Trigger: TTGGCCAATAAGAAATATACACAAGGCCGGGGAAGCCACAGCCAAGAAATGAGGTACAATCGACAAAACAGATGGAAACGGCAGAACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521169.5
3UTR-3UTR TCA 90 bp TTACATTTCTGCAAGCAGATAGGTGTGTTGCATCGTTTCCCACTCCAACCAGAATCGAAGGCCACGAACTaGTACTCAAAGTTTTCACCA +
Preference number: 2 (lower is better)
Translates to: LHFCKQIGVLHRFPLQPESKATN*YSKFSP
Trigger: TGGTGAAAACTTTGAGTATCAGTTCGTGGCCTTCGA...TTCTGGTTGGAGTGGGAAACGATGCAACACACCTATCTGCTTGCAGAAATGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521169.5
3UTR-3UTR GCA 90 bp ATTTCTCATGCAGTGGCCACCATTCTTACAGGGAGGGTGACAGAAAGCATTCTGCCTCCATTTTCACAGTaGCTGTTACAAACCATTGTT +
Preference number: 2 (lower is better)
Translates to: ISHAVATILTGRVTESILPPFSQ*LLQTIV
Trigger: AACAATGGTTTGTAACAGGCACTGTGAAAATGGAGG...CAGAATGCTTTCTGTCACCCTCCCTGTAAGAATGGTGGCCACTGCATGAGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
3UTR-3UTR GCA 90 bp TTACATTTCTGCAAGCAGATAGGTGTGTTGCATCGTTTCCCACTCCAACCAGAAAAGGACAAGAGCAAGTaGTTGGTCCCACACATTTTC +
Preference number: 2 (lower is better)
Translates to: LHFCKQIGVLHRFPLQPEKDKSK*LVPHIF
Trigger: GAAAATGTGTGGGACCAAGCACTTGCTCTTGTCCTT...TTCTGGTTGGAGTGGGAAACGATGCAACACACCTATCTGCTTGCAGAAATGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
3UTR-3UTR GCA 90 bp ATGTCTTCAATTGATGTGCCATACTCTTCTGTGTTATATTTCCCCTCCTCCACAGACACAGCCTTCCTATaGTGGAGTTGGCTAGAGTCT +
Preference number: 2 (lower is better)
Translates to: MSSIDVPYSSVLYFPSSTDTAFL*WSWLES
Trigger: AGACTCTAGCCAACTCCAGCATAGGAAGGCTGTGTC...TGTGGAGGAGGGGAAATATAACACAGAAGAGTATGGCACATCAATTGAAGACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521169.5
3UTR-3UTR CCA 90 bp ACACATTATTTCTCATGCAGTGGCCACCATTCTTACAGGGAGGGTGACAGAAAGACAGAGGCAAGTATTTaGCTTATTACACGAACCACC +
Preference number: 2 (lower is better)
Translates to: THYFSCSGHHSYREGDRKTEASI*LITRTT
Trigger: GGTGGTTCGTGTAATAAGCCAAATACTTGCCTCTGT...CTTTCTGTCACCCTCCCTGTAAGAATGGTGGCCACTGCATGAGAAATAATGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
3UTR-3UTR TCA 90 bp ATCATTAGATACCTTCAACTGCCACTTCCCAGTTGGTTTCCCACCCACCAGATCTTGAAGGTAATTCTTTaGAGCCTTTGCCAAAAACTC +
Preference number: 2 (lower is better)
Translates to: IIRYLQLPLPSWFPTHQILKVIL*SLCQKL
Trigger: GAGTTTTTGGCAAAGGCTTCAAAGAATTACCTTCAA...GATCTGGTGGGTGGGAAACCAACTGGGAAGTGGCAGTTGAAGGTATCTAATGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521169.5
3UTR-3UTR GCA 90 bp CATTTTCCATGGTTTTTGCAATCAGGGTCACAAAGAGCAGTTTGGCAGTTAGAACTTGTTGGCTTAACATaGCTCTTTCTCCCTTGGGCA +
Preference number: 2 (lower is better)
Translates to: HFPWFLQSGSQRAVWQLELVGLT*LFLPWA
Trigger: TGCCCAAGGGAGAAAGAGGCATGTTAAGCCAACAAG...TTCTAACTGCCAAACTGCTCTTTGTGACCCTGATTGCAAAAACCATGGAAAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
3UTR-3UTR GCA 90 bp CTTCTCACATTTGACTCCAGAGTATTCAGTGCGGCAGGAACACACATTGGGAAACCTCCATTTTCACAGTaGCTGTTACAAACCATTGTT +
Preference number: 2 (lower is better)
Translates to: LLTFDSRVFSAAGTHIGKPPFSQ*LLQTIV
Trigger: AACAATGGTTTGTAACAGGCACTGTGAAAATGGAGG...TTTCCCAATGTGTGTTCCTGCCGCACTGAATACTCTGGAGTCAAATGTGAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
3UTR-3UTR GCA 90 bp ATCATTAGATACCTTCAACTGCCACTTCCCAGTTGGTTTCCCACCCACCAGATCTCTTCTGGAGATGTATaGTTGTTTATCTCTCTGACA +
Preference number: 2 (lower is better)
Translates to: IIRYLQLPLPSWFPTHQISSGDV*LFISLT
Trigger: TGTCAGAGAGATAAACAAGCATACATCTCCAGAAGA...GATCTGGTGGGTGGGAAACCAACTGGGAAGTGGCAGTTGAAGGTATCTAATGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521169.5
3UTR-3UTR CCA 90 bp TGGCAAATATCTGGTGTAAGACACTGGCCTCCATTTTCACAGTGCCTGTTACAATTATTTCTCATGCAGTaGCCACCATTCTTACAGGGA +
Preference number: 2 (lower is better)
Translates to: WQISGVRHWPPFSQCLLQLFLMQ*PPFLQG
Trigger: TCCCTGTAAGAATGGTGGCCACTGCATGAGAAATAA...TTGTAACAGGCACTGTGAAAATGGAGGCCAGTGTCTTACACCAGATATTTGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
3UTR-3UTR TCA 90 bp GACAATGGCATATGCTGGGCGCAATGCATTCACCACCGTTTTTACATTTCTGCAAAGCACCATCATATATaGCCGTTATTTTGGGATTAC +
Preference number: 2 (lower is better)
Translates to: DNGICWAQCIHHRFYISAKHHHI*PLFWDY
Trigger: GTAATCCCAAAATAACGGTCATATATGATGGTGCTT...TGCAGAAATGTAAAAACGGTGGTGAATGCATTGCGCCCAGCATATGCCATTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521169.5
3UTR-3UTR GCA 90 bp AGAAAGCATTCTGACAGTGTTCCCCAAAGAATCCATTTGGACAGAGGCAAGTATAACCAGGTTTACATTTaGAGATGTTTGGGGCAACAC +
Preference number: 2 (lower is better)
Translates to: RKHSDSVPQRIHLDRGKYNQVYI*RCLGQH
Trigger: GTGTTGCCCCAAACATCTGCAAATGTAAACCTGGTT...ATACTTGCCTCTGTCCAAATGGATTCTTTGGGGAACACTGTCAGAATGCTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
3UTR-3UTR GCA 90 bp CTTCTCACATTTGACTCCAGAGTATTCAGTGCGGCAGGAACACACATTGGGAAAATTTTCCATGGTTTTTaGAATCAGGGTCACAAAGAG +
Preference number: 2 (lower is better)
Translates to: LLTFDSRVFSAAGTHIGKIFHGF*NQGHKE
Trigger: CTCTTTGTGACCCTGATTGCAAAAACCATGGAAAAT...TTTCCCAATGTGTGTTCCTGCCGCACTGAATACTCTGGAGTCAAATGTGAGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
3UTR-3UTR CCA 90 bp TTGCTTTGGCAATCGTCAGTTTGGCCGAGTATTAGTAATATGATTGGGCTAAAAAGAATGCCTGAACTGTaGTCTCTTGTGTCAGCTCCT +
Preference number: 2 (lower is better)
Translates to: LLWQSSVWPSISNMIGLKRMPEL*SLVSAP
Trigger: AGGAGCTGACACAAGAGACCACAGTTCAGGCATTCT...TTTTAGCCCAATCATATTACTAATACTCGGCCAAACTGACGATTGCCAAAGCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326715.4
3UTR-3UTR CCA 90 bp CAATGGCGTCTTATCTGTATTTTCTTCTCACATTTGACTCCAGAGTATTCAGTGACAAGAGCAAGTGCTTaGTCCCACACATTTTCCTCC +
Preference number: 2 (lower is better)
Translates to: QWRLICIFFSHLTPEYSVTRASA*SHTFSS
Trigger: GGAGGAAAATGTGTGGGACCAAGCACTTGCTCTTGT...CACTGAATACTCTGGAGTCAAATGTGAGAAGAAAATACAGATAAGACGCCATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
3UTR-3UTR CCA 90 bp GACAATGGCATATGCTGGGCGCAATGCATTCACCACCGTTTTTACATTTCTGCACTTGATGCTACTCAATaGCGTCTTATCTGTATTTTC +
Preference number: 2 (lower is better)
Translates to: DNGICWAQCIHHRFYISALDATQ*RLICIF
Trigger: GAAAATACAGATAAGACGCCATTGAGTAGCATCAAG...TGCAGAAATGTAAAAACGGTGGTGAATGCATTGCGCCCAGCATATGCCATTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
3UTR-3UTR TCA 90 bp ATCAACAGCTCTGCTATTGTGGAAAACAGTCTGTGTATAGATGGGTTCTCCAGGTCTGACAAGAGTGTCTaGATTAATATATTCGGAGGT +
Preference number: 2 (lower is better)
Translates to: INSSAIVENSLCIDGFSRSDKSV*INIFGG
Trigger: ACCTCCGAATATATTAATTCAGACACTCTTGTCAGA...CCTGGAGAACCCATCTATACACAGACTGTTTTCCACAATAGCAGAGCTGTTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521169.5
3UTR-3UTR GCA 90 bp AGTGTATCCTTCACGACAGACGCACACATTATTTCTCATGCAGTGGCCACCATTAAAGACATTTTGGGTTaGAAATTGGTATTTGACACC +
Preference number: 2 (lower is better)
Translates to: SVSFTTDAHIISHAVATIKDILG*KLVFDT
Trigger: GGTGTCAAATACCAATTTGCAACCCAAAATGTCTTT...AATGGTGGCCACTGCATGAGAAATAATGTGTGCGTCTGTCGTGAAGGATACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
3UTR-3UTR CCA 90 bp CATATACTTGATGCTACTCAATGGCGTCTTATCTGTATTTTCTTCTCACATTTGGACAATGGCATATGCTaGGCGCAATGCATTCACCAC +
Preference number: 2 (lower is better)
Translates to: HILDATQWRLICIFFSHLDNGIC*AQCIHH
Trigger: GTGGTGAATGCATTGCGCCCAGCATATGCCATTGTC...CAAATGTGAGAAGAAAATACAGATAAGACGCCATTGAGTAGCATCAAGTATATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
3UTR-3UTR TCA 90 bp CATATACTTGATGCTACTCAATGGCGTCTTATCTGTATTTTCTTCTCACATTTGTTGCAAATTGGTATTTaGCACCGCACTCCTTCCCAG +
Preference number: 2 (lower is better)
Translates to: HILDATQWRLICIFFSHLLQIGI*HRTPSQ
Trigger: CTGGGAAGGAGTGCGGTGTCAAATACCAATTTGCAA...CAAATGTGAGAAGAAAATACAGATAAGACGCCATTGAGTAGCATCAAGTATATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
3UTR-3UTR CCA 90 bp TGTATGCTTTCAGCCAAGAAGAAGAAATGTGAATTGCTTTGGCAATCGTCAGTTATTCTTGGCTTTCGATaGCTACACTTTGTACATGAG +
Preference number: 2 (lower is better)
Translates to: CMLSAKKKKCELLWQSSVILGFR*LHFVHE
Trigger: CTCATGTACAAAGTGTAGCCATCGAAAGCCAAGAAT...AACTGACGATTGCCAAAGCAATTCACATTTCTTCTTCTTGGCTGAAAGCATACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326715.4
3UTR-3UTR TCA 90 bp ACCATGTCCTGGAAGACACTGACAAATGTTAGGCTTAATACATTTTCCATGGTTGATATTTACAAATGGTaGAGGCATTTCCACTTGTTG +
Preference number: 2 (lower is better)
Translates to: TMSWKTLTNVRLNTFSMVDIYKW*RHFHLL
Trigger: CAACAAGTGGAAATGCCTTCACCATTTGTAAATATC...AACCATGGAAAATGTATTAAGCCTAACATTTGTCAGTGTCTTCCAGGACATGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
3UTR-3UTR GCA 90 bp CAATGGCGTCTTATCTGTATTTTCTTCTCACATTTGACTCCAGAGTATTCAGTGATTTTCCATGGTTTTTaGAATCAGGGTCACAAAGAG +
Preference number: 2 (lower is better)
Translates to: QWRLICIFFSHLTPEYSVIFHGF*NQGHKE
Trigger: CTCTTTGTGACCCTGATTGCAAAAACCATGGAAAAT...CACTGAATACTCTGGAGTCAAATGTGAGAAGAAAATACAGATAAGACGCCATTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
3UTR CAA 90 bp TTTGAAGCCTTTGCCAAAAACTCTCACCATCATACAATTATATTTTaGAACATCACAGAATCCAGCATTCCCAAGCTCTGTAATTTCAGG +
Preference number: 2 (lower is better)
Translates to: FEAFAKNSHHHTIIF*NITESSIPKLCNFR
Trigger: CCTGAAATTACAGAGCTTGGGAATGCTGGATTCTGTGATGTTCAAAAATATAATTGTATGATGGTGAGAGTTTTTGGCAAAGGCTTCAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521169.5
3UTR TCA 72 bp GAGTCTCCTGACAGAGGGTCAAGGTGCTATACTCGGTaGGGCCAGAGGGAGTGGGCCAAGAGGGGAAAAACT +
Preference number: 3 (lower is better)
Translates to: ESPDRGSRCYTR*GQREWAKRGKT
Trigger: AGTTTTTCCCCTCTTGGCCCACTCCCTCTGGCCTCACCGAGTATAGCACCTTGACCCTCTGTCAGGAGACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521169.5
3UTR GCA 72 bp AGTGGCTGGCTGCCCAAGGAGTGCTGTGATGTTGCCTaGTTCTGTCCCTTTGCTCCTGCTGTTGGTTTTGCC +
Preference number: 3 (lower is better)
Translates to: SGWLPKECCDVA*FCPFAPAVGFA
Trigger: GGCAAAACCAACAGCAGGAGCAAAGGGACAGAAGCAGGCAACATCACAGCACTCCTTGGGCAGCCAGCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452576.6
3UTR-3UTR CAA 90 bp AGACAGGGTCGCACAAAGCTGTACTACAGGTGGGTCCATACCAGCCAGGTTTGCTTACACGAACCACCATaGAGGCAGACAGGGTCGCAC +
Preference number: 3 (lower is better)
Translates to: RQGRTKLYYRWVHTSQVCLHEPP*RQTGSH
Trigger: GTGCGACCCTGTCTGCCTCAATGGTGGTTCGTGTAA...GCAAACCTGGCTGGTATGGACCCACCTGTAGTACAGCTTTGTGCGACCCTGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
3UTR CCA 72 bp GCCACTTCCCAGTTGGTTTCCCACCCACCAGATCCATaGTATCAAACTGCTGAACATCAGTGGGCAGCTGAC +
Preference number: 3 (lower is better)
Translates to: ATSQLVSHPPDP*YQTAEHQWAAD
Trigger: GTCAGCTGCCCACTGATGTTCAGCAGTTTGATACCATGGATCTGGTGGGTGGGAAACCAACTGGGAAGTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521169.5
3UTR-3UTR CAA 90 bp CAGGGTCGCACAAAGCTGTACTACAGGTGGGTCCATACCAGCCAGGTTTGCACTGTTCTTCATCACAGGTaGCTCCACCATGTCCTGGAA +
Preference number: 3 (lower is better)
Translates to: QGRTKLYYRWVHTSQVCTVLHHR*LHHVLE
Trigger: TTCCAGGACATGGTGGAGCAACCTGTGATGAAGAAC...AGTGCAAACCTGGCTGGTATGGACCCACCTGTAGTACAGCTTTGTGCGACCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
3UTR GCA 72 bp TATTCCAGGCACACTGAACTATTCACAGTGGCTGGCTaGCCAAGGAGTGCTGTGATGTTGCCTGCTTCTGTC +
Preference number: 3 (lower is better)
Translates to: YSRHTELFTVAG*PRSAVMLPASV
Trigger: GACAGAAGCAGGCAACATCACAGCACTCCTTGGGCAGCCAGCCACTGTGAATAGTTCAGTGTGCCTGGAATA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452576.6
3UTR GCA 72 bp ACCGCACTCCTTCCCAGGAGGAAGGACAATGGCATATaGTGGGCGCAATGCATTCACCACCGTTTTTACATT +
Preference number: 3 (lower is better)
Translates to: TALLPRRKDNGI*WAQCIHHRFYI
Trigger: AATGTAAAAACGGTGGTGAATGCATTGCGCCCAGCATATGCCATTGTCCTTCCTCCTGGGAAGGAGTGCGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
3UTR CCA 72 bp GGGTCCATACCAGCCAGGTTTGCACTGGCAAATATCTaGTGTAAGACACTGGCCTCCATTTTCACAGTGCCT +
Preference number: 3 (lower is better)
Translates to: GSIPARFALANI*CKTLASIFTVP
Trigger: AGGCACTGTGAAAATGGAGGCCAGTGTCTTACACCAGATATTTGCCAGTGCAAACCTGGCTGGTATGGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
3UTR CCA 72 bp ACACTTGCCCCTTCAGGACCAGAGTCCAACGTAAAATaGATGTCAGAACCTTCTGGATCGAAGGCCACGAAC +
Preference number: 3 (lower is better)
Translates to: TLAPSGPESNVK*MSEPSGSKATN
Trigger: GTTCGTGGCCTTCGATCCAGAAGGTTCTGACATCCATTTTACGTTGGACTCTGGTCCTGAAGGGGCAAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521169.5
3UTR-3UTR CAA 90 bp AATTGGTATTTGACACCGCACTCCTTCCCAGGAGGAAGGACAATGGCATATGCTCCTGCTTCTGTCCCTTaGCTCCTGCTGTTGGTTTTG +
Preference number: 3 (lower is better)
Translates to: NWYLTPHSFPGGRTMAYAPASVP*LLLLVL
Trigger: CAAAACCAACAGCAGGAGCAAAGGGACAGAAGCAGG...AGCATATGCCATTGTCCTTCCTCCTGGGAAGGAGTGCGGTGTCAAATACCAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452576.6
3UTR-3UTR CAA 90 bp AGACAGGGTCGCACAAAGCTGTACTACAGGTGGGTCCATACCAGCCAGGTTTGCCCATTGTTTCACACCTaGGTCCTACAAAACCATAAG +
Preference number: 3 (lower is better)
Translates to: RQGRTKLYYRWVHTSQVCPLFHT*VLQNHK
Trigger: CTTATGGTTTTGTAGGACCAAGGTGTGAAACAATGG...GCAAACCTGGCTGGTATGGACCCACCTGTAGTACAGCTTTGTGCGACCCTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
3UTR CCA 72 bp ATTCCCAGCCAAGCATGTGCCACCATGTTGACAAGGTaGGTTACAATGTTCTTCATCACAGGTTGCTCCACC +
Preference number: 3 (lower is better)
Translates to: IPSQACATMLTR*VTMFFITGCST
Trigger: GGTGGAGCAACCTGTGATGAAGAACATTGTAACCCACCTTGTCAACATGGTGGCACATGCTTGGCTGGGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
3UTR CCA 72 bp GTACTACAGGTGGGTCCATACCAGCCAGGTTTGCACTaGCAAATATCTGGTGTAAGACACTGGCCTCCATTT +
Preference number: 3 (lower is better)
Translates to: VLQVGPYQPGLH*QISGVRHWPPF
Trigger: AAATGGAGGCCAGTGTCTTACACCAGATATTTGCCAGTGCAAACCTGGCTGGTATGGACCCACCTGTAGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
3UTR CCA 72 bp GCACTCCTTCCCAGGAGGAAGGACAATGGCATATGCTaGGCGCAATGCATTCACCACCGTTTTTACATTTCT +
Preference number: 3 (lower is better)
Translates to: ALLPRRKDNGIC*AQCIHHRFYIS
Trigger: AGAAATGTAAAAACGGTGGTGAATGCATTGCGCCCAGCATATGCCATTGTCCTTCCTCCTGGGAAGGAGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
3UTR-3UTR CAA 90 bp GGACAGAGGCAAGTATTTGGCTTATTACACGAACCACCATTGAGGCAGACAGGGTACATTTGCAGATGTTaGGGGCAACACACTCCCTAC +
Preference number: 3 (lower is better)
Translates to: GQRQVFGLLHEPPLRQTGYICRC*GQHTPY
Trigger: GTAGGGAGTGTGTTGCCCCAAACATCTGCAAATGTA...CCCTGTCTGCCTCAATGGTGGTTCGTGTAATAAGCCAAATACTTGCCTCTGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
3UTR-3UTR CAA 90 bp TATTTGACACCGCACTCCTTCCCAGGAGGAAGGACAATGGCATATGCTGGGCGCATCACAGATGCTTTTTaGGAATCTCCTACCAGTGTA +
Preference number: 3 (lower is better)
Translates to: YLTPHSFPGGRTMAYAGRITDAF*ESPTSV
Trigger: TACACTGGTAGGAGATTCCAAAAAAGCATCTGTGAT...GCGCCCAGCATATGCCATTGTCCTTCCTCCTGGGAAGGAGTGCGGTGTCAAATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
3UTR-3UTR CAA 90 bp TCTCATGCAGTGGCCACCATTCTTACAGGGAGGGTGACAGAAAGCATTCTGACAAAGCAGATAGGTGTGTaGCATCGTTTCCCACTCCAA +
Preference number: 3 (lower is better)
Translates to: SHAVATILTGRVTESILTKQIGV*HRFPLQ
Trigger: TTGGAGTGGGAAACGATGCAACACACCTATCTGCTT...TGTCAGAATGCTTTCTGTCACCCTCCCTGTAAGAATGGTGGCCACTGCATGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
3UTR-3UTR CAA 90 bp CACATTATTTCTCATGCAGTGGCCACCATTCTTACAGGGAGGGTGACAGAAAGCGTGGCTTCCCCGGCCTaGTGTATATTTCTTATTGGC +
Preference number: 3 (lower is better)
Translates to: HIISHAVATILTGRVTESVASPA*CIFLIG
Trigger: GCCAATAAGAAATATACACAAGGCCGGGGAAGCCAC...GCTTTCTGTCACCCTCCCTGTAAGAATGGTGGCCACTGCATGAGAAATAATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521169.5
3UTR TCA 72 bp AGAGGCAAGTATTTGGCTTATTACACGAACCACCATTaGGGCAGACAGGGTCGCACAAAGCTGTACTACAGG +
Preference number: 3 (lower is better)
Translates to: RGKYLAYYTNHH*GRQGRTKLYYR
Trigger: CCTGTAGTACAGCTTTGTGCGACCCTGTCTGCCTCAATGGTGGTTCGTGTAATAAGCCAAATACTTGCCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
3UTR-3UTR CAA 90 bp ATCTCCTACCAGTGTATCCTTCACGACAGACGCACACATTATTTCTCATGCAGTCCTTTGCTCCTGCTGTaGGTTTTGCCTGGAATGCCT +
Preference number: 3 (lower is better)
Translates to: ISYQCILHDRRTHYFSCSPLLLL*VLPGMP
Trigger: AGGCATTCCAGGCAAAACCAACAGCAGGAGCAAAGG...ACTGCATGAGAAATAATGTGTGCGTCTGTCGTGAAGGATACACTGGTAGGAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452576.6
3UTR-3UTR CAA 90 bp AGTGTATCCTTCACGACAGACGCACACATTATTTCTCATGCAGTGGCCACCATTGCATGTGCCACCATGTaGACAAGGTGGGTTACAATG +
Preference number: 3 (lower is better)
Translates to: SVSFTTDAHIISHAVATIACATM*TRWVTM
Trigger: CATTGTAACCCACCTTGTCAACATGGTGGCACATGC...AATGGTGGCCACTGCATGAGAAATAATGTGTGCGTCTGTCGTGAAGGATACACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
3UTR-3UTR CAA 90 bp CTTCTCACATTTGACTCCAGAGTATTCAGTGCGGCAGGAACACACATTGGGAAAGACAAGAGCAAGTGCTaGGTCCCACACATTTTCCTC +
Preference number: 3 (lower is better)
Translates to: LLTFDSRVFSAAGTHIGKDKSKC*VPHIFL
Trigger: GAGGAAAATGTGTGGGACCAAGCACTTGCTCTTGTC...TTTCCCAATGTGTGTTCCTGCCGCACTGAATACTCTGGAGTCAAATGTGAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
3UTR-3UTR CAA 90 bp TGGCAAATATCTGGTGTAAGACACTGGCCTCCATTTTCACAGTGCCTGTTACAACCAAGACCACAAGGGTaGGATTGGCACCCACTAATG +
Preference number: 3 (lower is better)
Translates to: WQISGVRHWPPFSQCLLQPRPQG*DWHPLM
Trigger: CATTAGTGGGTGCCAATCCAACCCTTGTGGTCTTGG...TTGTAACAGGCACTGTGAAAATGGAGGCCAGTGTCTTACACCAGATATTTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521169.5
3UTR-3UTR CAA 90 bp TGGCAAATATCTGGTGTAAGACACTGGCCTCCATTTTCACAGTGCCTGTTACAACTCCTGCTGTTGGTTTaGCCTGGAATGCCTTTCTCT +
Preference number: 3 (lower is better)
Translates to: WQISGVRHWPPFSQCLLQLLLLV*PGMPFS
Trigger: AGAGAAAGGCATTCCAGGCAAAACCAACAGCAGGAG...TTGTAACAGGCACTGTGAAAATGGAGGCCAGTGTCTTACACCAGATATTTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452576.6
3UTR-3UTR CAA 90 bp TCTCATGCAGTGGCCACCATTCTTACAGGGAGGGTGACAGAAAGCATTCTGACACCATTGTTTCACACCTaGGTCCTACAAAACCATAAG +
Preference number: 3 (lower is better)
Translates to: SHAVATILTGRVTESILTPLFHT*VLQNHK
Trigger: CTTATGGTTTTGTAGGACCAAGGTGTGAAACAATGG...TGTCAGAATGCTTTCTGTCACCCTCCCTGTAAGAATGGTGGCCACTGCATGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
3UTR-3UTR CAA 90 bp ATCATTAGATACCTTCAACTGCCACTTCCCAGTTGGTTTCCCACCCACCAGATCGCCTGTTACAAACCATaGTTTCACACCTTGGTCCTA +
Preference number: 3 (lower is better)
Translates to: IIRYLQLPLPSWFPTHQIACYKP*FHTLVL
Trigger: TAGGACCAAGGTGTGAAACAATGGTTTGTAACAGGC...GATCTGGTGGGTGGGAAACCAACTGGGAAGTGGCAGTTGAAGGTATCTAATGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521169.5
3UTR-3UTR CAA 90 bp TTACATTTCTGCAAGCAGATAGGTGTGTTGCATCGTTTCCCACTCCAACCAGAAAAGCAGATAGGTGTGTaGCATCGTTTCCCACTCCAA +
Preference number: 3 (lower is better)
Translates to: LHFCKQIGVLHRFPLQPEKQIGV*HRFPLQ
Trigger: TTGGAGTGGGAAACGATGCAACACACCTATCTGCTT...TTCTGGTTGGAGTGGGAAACGATGCAACACACCTATCTGCTTGCAGAAATGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
3UTR-3UTR CAA 90 bp CAGTGTATCCTTCACGACAGACGCACACATTATTTCTCATGCAGTGGCCACCATTTGCCGCTGCATAAATaGGGGCATTTTAATACTGAG +
Preference number: 3 (lower is better)
Translates to: QCILHDRRTHYFSCSGHHLPLHK*GHFNTE
Trigger: CTCAGTATTAAAATGCCCCAATTTATGCAGCGGCAA...ATGGTGGCCACTGCATGAGAAATAATGTGTGCGTCTGTCGTGAAGGATACACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521169.5
3UTR GCA 72 bp GCTGAACATCAGTGGGCAGCTGACAATCAACAGCTCTaGTATTGTGGAAAACAGTCTGTGTATAGATGGGTT +
Preference number: 3 (lower is better)
Translates to: AEHQWAADNQQL*YCGKQSVYRWV
Trigger: AACCCATCTATACACAGACTGTTTTCCACAATAGCAGAGCTGTTGATTGTCAGCTGCCCACTGATGTTCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521169.5
3UTR CCA 72 bp CATCTGTTTTGTCGATTGTACCTCATTTCTTGGCTGTaGCTTCCCCGGCCTTGTGTATATTTCTTATTGGCC +
Preference number: 3 (lower is better)
Translates to: HLFCRLYLISWL*LPRPCVYFLLA
Trigger: GGCCAATAAGAAATATACACAAGGCCGGGGAAGCCACAGCCAAGAAATGAGGTACAATCGACAAAACAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521169.5
3UTR-3UTR CAA 90 bp AGTGTATCCTTCACGACAGACGCACACATTATTTCTCATGCAGTGGCCACCATTGTCACAAAGAGCAGTTaGGCAGTTAGAACCAATGTA +
Preference number: 3 (lower is better)
Translates to: SVSFTTDAHIISHAVATIVTKSS*AVRTNV
Trigger: TACATTGGTTCTAACTGCCAAACTGCTCTTTGTGAC...AATGGTGGCCACTGCATGAGAAATAATGTGTGCGTCTGTCGTGAAGGATACACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
3UTR-3UTR CAA 90 bp TGGCAAATATCTGGTGTAAGACACTGGCCTCCATTTTCACAGTGCCTGTTACAACCCCAAAGAATCCATTaGGACAGAGGCAAGTATTTG +
Preference number: 3 (lower is better)
Translates to: WQISGVRHWPPFSQCLLQPQRIH*DRGKYL
Trigger: CAAATACTTGCCTCTGTCCAAATGGATTCTTTGGGG...TTGTAACAGGCACTGTGAAAATGGAGGCCAGTGTCTTACACCAGATATTTGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
3UTR TCA 72 bp CTGAGACTCGGGAAAGCAAACAAAGGAGGAAACTCATaGAAGTTCTGCCGTTTCCATCTGTTTTGTCGATTG +
Preference number: 3 (lower is better)
Translates to: LRLGKANKGGNS*KFCRFHLFCRL
Trigger: CAATCGACAAAACAGATGGAAACGGCAGAACTTTCATGAGTTTCCTCCTTTGTTTGCTTTCCCGAGTCTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521169.5
3UTR CCA 72 bp ACCAGAGTCCAACGTAAAATGGATGTCAGAACCTTCTaGATCGAAGGCCACGAACTGATACTCAAAGTTTTC +
Preference number: 3 (lower is better)
Translates to: TRVQRKMDVRTF*IEGHELILKVF
Trigger: GAAAACTTTGAGTATCAGTTCGTGGCCTTCGATCCAGAAGGTTCTGACATCCATTTTACGTTGGACTCTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521169.5
3UTR-3UTR CAA 90 bp TTACATTTCTGCAAGCAGATAGGTGTGTTGCATCGTTTCCCACTCCAACCAGAAATTTTGGGTTGCAAATaGGTATTTGACACCGCACTC +
Preference number: 3 (lower is better)
Translates to: LHFCKQIGVLHRFPLQPEILGCK*VFDTAL
Trigger: GAGTGCGGTGTCAAATACCAATTTGCAACCCAAAAT...TTCTGGTTGGAGTGGGAAACGATGCAACACACCTATCTGCTTGCAGAAATGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
3UTR-3UTR CAA 90 bp TGGCAAATATCTGGTGTAAGACACTGGCCTCCATTTTCACAGTGCCTGTTACAAATTTTGGGTTGCAAATaGGTATTTGACACCGCACTC +
Preference number: 3 (lower is better)
Translates to: WQISGVRHWPPFSQCLLQILGCK*VFDTAL
Trigger: GAGTGCGGTGTCAAATACCAATTTGCAACCCAAAAT...TTGTAACAGGCACTGTGAAAATGGAGGCCAGTGTCTTACACCAGATATTTGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
3UTR-3UTR CAA 90 bp TGGCAAATATCTGGTGTAAGACACTGGCCTCCATTTTCACAGTGCCTGTTACAACATCTGTTTTGTCGATaGTACCTCATTTCTTGGCTG +
Preference number: 3 (lower is better)
Translates to: WQISGVRHWPPFSQCLLQHLFCR*YLISWL
Trigger: CAGCCAAGAAATGAGGTACAATCGACAAAACAGATG...TTGTAACAGGCACTGTGAAAATGGAGGCCAGTGTCTTACACCAGATATTTGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521169.5
3UTR-3UTR CAA 90 bp AGGAAGGACAATGGCATATGCTGGGCGCAATGCATTCACCACCGTTTTTACATTAGAGAATGTCTTCAATaGATGTGCCATACTCTTCTG +
Preference number: 3 (lower is better)
Translates to: RKDNGICWAQCIHHRFYIRECLQ*MCHTLL
Trigger: CAGAAGAGTATGGCACATCAATTGAAGACATTCTCT...AATGTAAAAACGGTGGTGAATGCATTGCGCCCAGCATATGCCATTGTCCTTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521169.5
3UTR GCA 72 bp CAAATGGTGAAGGCATTTCCACTTGTTGGCTTAACATaGCTCTTTCTCCCTTGGGCATTTTTATCATCCTCT +
Preference number: 3 (lower is better)
Translates to: QMVKAFPLVGLT*LFLPWAFLSSS
Trigger: AGAGGATGATAAAAATGCCCAAGGGAGAAAGAGGCATGTTAAGCCAACAAGTGGAAATGCCTTCACCATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
3UTR CCA 72 bp GAAAGCATTCTGACAGTGTTCCCCAAAGAATCCATTTaGACAGAGGCAAGTATTTGGCTTATTACACGAACC +
Preference number: 3 (lower is better)
Translates to: ESILTVFPKESI*TEASIWLITRT
Trigger: GGTTCGTGTAATAAGCCAAATACTTGCCTCTGTCCAAATGGATTCTTTGGGGAACACTGTCAGAATGCTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
3UTR CCA 72 bp CAGCTCTGCTATTGTGGAAAACAGTCTGTGTATAGATaGGTTCTCCAGGCATCCATTCACTGCTATTATACT +
Preference number: 3 (lower is better)
Translates to: QLCYCGKQSVYR*VLQASIHCYYT
Trigger: AGTATAATAGCAGTGAATGGATGCCTGGAGAACCCATCTATACACAGACTGTTTTCCACAATAGCAGAGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521169.5
3UTR-3UTR CAA 90 bp GCCTCCATAAAGACATTTTGGGTTGCAAATTGGTATTTGACACCGCACTCCTTCATCACAGATGCTTTTTaGGAATCTCCTACCAGTGTA +
Preference number: 3 (lower is better)
Translates to: ASIKTFWVANWYLTPHSFITDAF*ESPTSV
Trigger: TACACTGGTAGGAGATTCCAAAAAAGCATCTGTGAT...GAAGGAGTGCGGTGTCAAATACCAATTTGCAACCCAAAATGTCTTTATGGAGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
3UTR TCA 72 bp AGATTTATGCCATCAAGTTCTAAAAGAGAGAATGCCTaGACTGTGGTCTCTTGTGTCAGCTCCTCTTTGACT +
Preference number: 3 (lower is better)
Translates to: RFMPSSSKRENA*TVVSCVSSSLT
Trigger: AGTCAAAGAGGAGCTGACACAAGAGACCACAGTTCAGGCATTCTCTCTTTTAGAACTTGATGGCATAAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326715.4
3UTR CCA 72 bp AGAACCAATGTAACCAGGTTTACATTTGCAGATGTTTaGGGCAACACACTCCCTACTTTTTCCACATGGATA +
Preference number: 3 (lower is better)
Translates to: RTNVTRFTFADV*GNTLPTFSTWI
Trigger: TATCCATGTGGAAAAAGTAGGGAGTGTGTTGCCCCAAACATCTGCAAATGTAAACCTGGTTACATTGGTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
3UTR-3UTR CAA 90 bp CAATGGCGTCTTATCTGTATTTTCTTCTCACATTTGACTCCAGAGTATTCAGTGAATTCTTTGAAGCCTTaGCCAAAAACTCTCACCATC +
Preference number: 3 (lower is better)
Translates to: QWRLICIFFSHLTPEYSVNSLKP*PKTLTI
Trigger: GATGGTGAGAGTTTTTGGCAAAGGCTTCAAAGAATT...CACTGAATACTCTGGAGTCAAATGTGAGAAGAAAATACAGATAAGACGCCATTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521169.5
3UTR TCA 72 bp ACATCTAGTTCTGGTATCAAAGAAGATAAGCTGACATaGTTGAGGTCTTTGCAACCCAAGGCAATTTCTGAT +
Preference number: 3 (lower is better)
Translates to: TSSSGIKEDKLT*LRSLQPKAISD
Trigger: ATCAGAAATTGCCTTGGGTTGCAAAGACCTCAATCATGTCAGCTTATCTTCTTTGATACCAGAACTAGATGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521169.5
CDS-3UTR CCA 90 bp TGGTATTTGACACCGCACTCCTTCCCAGGAGGAAGGACAATGGCATATGCTGGGCGCTGCTTCCGCAGGTaGGGCGAAAGGCGTCGCAGA +
Preference number: 4 (lower is better)
Translates to: WYLTPHSFPGGRTMAYAGRCFRR*GERRRR
Trigger: TCTGCGACGCCTTTCGCCCCACCTGCGGAAGCAGCG...CCCAGCATATGCCATTGTCCTTCCTCCTGGGAAGGAGTGCGGTGTCAAATACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR GCA 90 bp TATTTGACACCGCACTCCTTCCCAGGAGGAAGGACAATGGCATATGCTGGGCGCGTCCTCGTTCTGGGGTaGACCCAGTCCTTTCGTGGG +
Preference number: 4 (lower is better)
Translates to: YLTPHSFPGGRTMAYAGRVLVLG*TQSFRG
Trigger: CCCACGAAAGGACTGGGTGCACCCCAGAACGAGGAC...GCGCCCAGCATATGCCATTGTCCTTCCTCCTGGGAAGGAGTGCGGTGTCAAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CCA 90 bp GTATTTGACACCGCACTCCTTCCCAGGAGGAAGGACAATGGCATATGCTGGGCGTCCGCGTCCTCGTTCTaGGGTGCACCCAGTCCTTTC +
Preference number: 4 (lower is better)
Translates to: VFDTALLPRRKDNGICWASASSF*GAPSPF
Trigger: GAAAGGACTGGGTGCACCCCAGAACGAGGACGCGGA...CGCCCAGCATATGCCATTGTCCTTCCTCCTGGGAAGGAGTGCGGTGTCAAATAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR GCA 90 bp ACACCGCACTCCTTCCCAGGAGGAAGGACAATGGCATATGCTGGGCGCAATGCACCATGCACTGCCCATTaGCGCTGCATAAATTGGGGC +
Preference number: 4 (lower is better)
Translates to: TPHSFPGGRTMAYAGRNAPCTAH*RCINWG
Trigger: GCCCCAATTTATGCAGCGGCAATGGGCAGTGCATGG...TGCATTGCGCCCAGCATATGCCATTGTCCTTCCTCCTGGGAAGGAGTGCGGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR TCA 90 bp CAGGGTCGCACAAAGCTGTACTACAGGTGGGTCCATACCAGCCAGGTTTGCACTAGCCAGATGGGGGCCTaGGTTCCACAATGGTTCATC +
Preference number: 4 (lower is better)
Translates to: QGRTKLYYRWVHTSQVCTSQMGA*VPQWFI
Trigger: GATGAACCATTGTGGAACTCAGGCCCCCATCTGGCT...AGTGCAAACCTGGCTGGTATGGACCCACCTGTAGTACAGCTTTGTGCGACCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR TCA 90 bp AGACAGGGTCGCACAAAGCTGTACTACAGGTGGGTCCATACCAGCCAGGTTTGCAGCCAGATGGGGGCCTaGGTTCCACAATGGTTCATC +
Preference number: 4 (lower is better)
Translates to: RQGRTKLYYRWVHTSQVCSQMGA*VPQWFI
Trigger: GATGAACCATTGTGGAACTCAGGCCCCCATCTGGCT...GCAAACCTGGCTGGTATGGACCCACCTGTAGTACAGCTTTGTGCGACCCTGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR TCA 90 bp TCTCATGCAGTGGCCACCATTCTTACAGGGAGGGTGACAGAAAGCATTCTGACAAGGTGCTATACTCGGTaGGGCCAGAGGGAGTGGGCC +
Preference number: 4 (lower is better)
Translates to: SHAVATILTGRVTESILTRCYTR*GQREWA
Trigger: GGCCCACTCCCTCTGGCCTCACCGAGTATAGCACCT...TGTCAGAATGCTTTCTGTCACCCTCCCTGTAAGAATGGTGGCCACTGCATGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR GCA 90 bp CAGACAGGGTCGCACAAAGCTGTACTACAGGTGGGTCCATACCAGCCAGGTTTGCCATGCACTGCCCATTaGCGCTGCATAAATTGGGGC +
Preference number: 4 (lower is better)
Translates to: QTGSHKAVLQVGPYQPGLPCTAH*RCINWG
Trigger: GCCCCAATTTATGCAGCGGCAATGGGCAGTGCATGG...CAAACCTGGCTGGTATGGACCCACCTGTAGTACAGCTTTGTGCGACCCTGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR CCA 90 bp TATTTGACACCGCACTCCTTCCCAGGAGGAAGGACAATGGCATATGCTGGGCGCCAGTCTGTTGCTGCTTaGAACAGGGAAGCTCCGCGT +
Preference number: 4 (lower is better)
Translates to: YLTPHSFPGGRTMAYAGRQSVAA*NREAPR
Trigger: ACGCGGAGCTTCCCTGTTCCAAGCAGCAACAGACTG...GCGCCCAGCATATGCCATTGTCCTTCCTCCTGGGAAGGAGTGCGGTGTCAAATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CCA 90 bp CAGACAGGGTCGCACAAAGCTGTACTACAGGTGGGTCCATACCAGCCAGGTTTGCTGCCACTTCCCAGTTaGTTTCCCACCCACCAGATC +
Preference number: 4 (lower is better)
Translates to: QTGSHKAVLQVGPYQPGLLPLPS*FPTHQI
Trigger: GATCTGGTGGGTGGGAAACCAACTGGGAAGTGGCAG...CAAACCTGGCTGGTATGGACCCACCTGTAGTACAGCTTTGTGCGACCCTGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR CCA 90 bp ACACCGCACTCCTTCCCAGGAGGAAGGACAATGGCATATGCTGGGCGCAATGCATCACAAAGGCTGCCATaGAAGCCAGGCAAGCAGACA +
Preference number: 4 (lower is better)
Translates to: TPHSFPGGRTMAYAGRNASQRLP*KPGKQT
Trigger: TGTCTGCTTGCCTGGCTTCCATGGCAGCCTTTGTGA...TGCATTGCGCCCAGCATATGCCATTGTCCTTCCTCCTGGGAAGGAGTGCGGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR TCA 90 bp GTATTTGACACCGCACTCCTTCCCAGGAGGAAGGACAATGGCATATGCTGGGCGCTGCTGGAGGTGCCATaGGTCAAAACGGACACTTCT +
Preference number: 4 (lower is better)
Translates to: VFDTALLPRRKDNGICWALLEVP*VKTDTS
Trigger: AGAAGTGTCCGTTTTGACTCATGGCACCTCCAGCAG...CGCCCAGCATATGCCATTGTCCTTCCTCCTGGGAAGGAGTGCGGTGTCAAATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR TCA 90 bp ATTACACGAACCACCATTGAGGCAGACAGGGTCGCACAAAGCTGTACTACAGGTAGGTGGAGGTGGCAATaGGGCAGCCAGCTGACGAAC +
Preference number: 4 (lower is better)
Translates to: ITRTTIEADRVAQSCTTGRWRWQ*GSQLTN
Trigger: GTTCGTCAGCTGGCTGCCTCATTGCCACCTCCACCT...ACCTGTAGTACAGCTTTGTGCGACCCTGTCTGCCTCAATGGTGGTTCGTGTAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR TCA 90 bp ACACCGCACTCCTTCCCAGGAGGAAGGACAATGGCATATGCTGGGCGCAATGCACGCTGCAGTGTCCAATaGACAGCTACAATAGGATGG +
Preference number: 4 (lower is better)
Translates to: TPHSFPGGRTMAYAGRNARCSVQ*TATIGW
Trigger: CCATCCTATTGTAGCTGTTCATTGGACACTGCAGCG...TGCATTGCGCCCAGCATATGCCATTGTCCTTCCTCCTGGGAAGGAGTGCGGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR GCA 90 bp GTATTTGACACCGCACTCCTTCCCAGGAGGAAGGACAATGGCATATGCTGGGCGTCCCAGCCAAGCATGTaGCACCATGTTGACAAGGTG +
Preference number: 4 (lower is better)
Translates to: VFDTALLPRRKDNGICWASQPSM*HHVDKV
Trigger: CACCTTGTCAACATGGTGGCACATGCTTGGCTGGGA...CGCCCAGCATATGCCATTGTCCTTCCTCCTGGGAAGGAGTGCGGTGTCAAATAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR GCA 90 bp ATTACACGAACCACCATTGAGGCAGACAGGGTCGCACAAAGCTGTACTACAGGTGTCCTCGTTCTGGGGTaGACCCAGTCCTTTCGTGGG +
Preference number: 4 (lower is better)
Translates to: ITRTTIEADRVAQSCTTGVLVLG*TQSFRG
Trigger: CCCACGAAAGGACTGGGTGCACCCCAGAACGAGGAC...ACCTGTAGTACAGCTTTGTGCGACCCTGTCTGCCTCAATGGTGGTTCGTGTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR CCA 90 bp AGACAGGGTCGCACAAAGCTGTACTACAGGTGGGTCCATACCAGCCAGGTTTGCTCAGAGACAGCCAGATaGGGGCCTGAGTTCCACAAT +
Preference number: 4 (lower is better)
Translates to: RQGRTKLYYRWVHTSQVCSETAR*GPEFHN
Trigger: ATTGTGGAACTCAGGCCCCCATCTGGCTGTCTCTGA...GCAAACCTGGCTGGTATGGACCCACCTGTAGTACAGCTTTGTGCGACCCTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR TCA 90 bp GTATTTGACACCGCACTCCTTCCCAGGAGGAAGGACAATGGCATATGCTGGGCGAAGCTGTCAATTGCTTaGTCTCCCCAGGAGATGGCA +
Preference number: 4 (lower is better)
Translates to: VFDTALLPRRKDNGICWAKLSIA*SPQEMA
Trigger: TGCCATCTCCTGGGGAGATCAAGCAATTGACAGCTT...CGCCCAGCATATGCCATTGTCCTTCCTCCTGGGAAGGAGTGCGGTGTCAAATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR TCA 90 bp CACATTATTTCTCATGCAGTGGCCACCATTCTTACAGGGAGGGTGACAGAAAGCAGGTGGAGGTGGCAATaGGGCAGCCAGCTGACGAAC +
Preference number: 4 (lower is better)
Translates to: HIISHAVATILTGRVTESRWRWQ*GSQLTN
Trigger: GTTCGTCAGCTGGCTGCCTCATTGCCACCTCCACCT...GCTTTCTGTCACCCTCCCTGTAAGAATGGTGGCCACTGCATGAGAAATAATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR TCA 90 bp CAGGGTCGCACAAAGCTGTACTACAGGTGGGTCCATACCAGCCAGGTTTGCACTTGGAGAAGGTCCACATaGCAGGAAGACAGTGCCAAA +
Preference number: 4 (lower is better)
Translates to: QGRTKLYYRWVHTSQVCTWRRST*QEDSAK
Trigger: TTTGGCACTGTCTTCCTGTCATGTGGACCTTCTCCA...AGTGCAAACCTGGCTGGTATGGACCCACCTGTAGTACAGCTTTGTGCGACCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452576.6
CDS-3UTR TCA 90 bp TGGTATTTGACACCGCACTCCTTCCCAGGAGGAAGGACAATGGCATATGCTGGGTTGGCTAGAGTCTCCTaGCAGAGGGTCAAGGTGCTA +
Preference number: 4 (lower is better)
Translates to: WYLTPHSFPGGRTMAYAGLARVS*QRVKVL
Trigger: TAGCACCTTGACCCTCTGTCAGGAGACTCTAGCCAA...CCCAGCATATGCCATTGTCCTTCCTCCTGGGAAGGAGTGCGGTGTCAAATACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR TCA 90 bp CAGGGTCGCACAAAGCTGTACTACAGGTGGGTCCATACCAGCCAGGTTTGCACTACATCAGTGGGCAGCTaGCAATCAACAGCTCTGCTA +
Preference number: 4 (lower is better)
Translates to: QGRTKLYYRWVHTSQVCTTSVGS*QSTALL
Trigger: TAGCAGAGCTGTTGATTGTCAGCTGCCCACTGATGT...AGTGCAAACCTGGCTGGTATGGACCCACCTGTAGTACAGCTTTGTGCGACCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR TCA 90 bp ACACCGCACTCCTTCCCAGGAGGAAGGACAATGGCATATGCTGGGCGCAATGCACATGTGCCACCATGTTaGCAAGGTGGGTTACAATGT +
Preference number: 4 (lower is better)
Translates to: TPHSFPGGRTMAYAGRNAHVPPC*QGGLQC
Trigger: ACATTGTAACCCACCTTGTCAACATGGTGGCACATG...TGCATTGCGCCCAGCATATGCCATTGTCCTTCCTCCTGGGAAGGAGTGCGGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR GCA 90 bp TATTTGACACCGCACTCCTTCCCAGGAGGAAGGACAATGGCATATGCTGGGCGCTTCTCAGTCTGTTGCTaGTTGGAACAGGGAAGCTCC +
Preference number: 4 (lower is better)
Translates to: YLTPHSFPGGRTMAYAGRFSVCC*LEQGSS
Trigger: GGAGCTTCCCTGTTCCAAGCAGCAACAGACTGAGAA...GCGCCCAGCATATGCCATTGTCCTTCCTCCTGGGAAGGAGTGCGGTGTCAAATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR GCA 90 bp GCATCTGCCTCCATAAAGACATTTTGGGTTGCAAATTGGTATTTGACACCGCACTCCGCCAGGCATCGCTaGTTCCGCAGGTGGGGCGAA +
Preference number: 4 (lower is better)
Translates to: ASASIKTFWVANWYLTPHSARHR*FRRWGE
Trigger: TTCGCCCCACCTGCGGAAGCAGCGATGCCTGGCGGA...GTGCGGTGTCAAATACCAATTTGCAACCCAAAATGTCTTTATGGAGGCAGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR GCA 90 bp ACACCGCACTCCTTCCCAGGAGGAAGGACAATGGCATATGCTGGGCGCAATGCACTTGTTGGCTTAACATaGCTCTTTCTCCCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: TPHSFPGGRTMAYAGRNALVGLT*LFLPWA
Trigger: TGCCCAAGGGAGAAAGAGGCATGTTAAGCCAACAAG...TGCATTGCGCCCAGCATATGCCATTGTCCTTCCTCCTGGGAAGGAGTGCGGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CCA 90 bp GCATCTGCCTCCATAAAGACATTTTGGGTTGCAAATTGGTATTTGACACCGCACCGCTGCTTCCGCAGGTaGGGCGAAAGGCGTCGCAGA +
Preference number: 4 (lower is better)
Translates to: ASASIKTFWVANWYLTPHRCFRR*GERRRR
Trigger: TCTGCGACGCCTTTCGCCCCACCTGCGGAAGCAGCG...GTGCGGTGTCAAATACCAATTTGCAACCCAAAATGTCTTTATGGAGGCAGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CCA 90 bp CGCACACATTATTTCTCATGCAGTGGCCACCATTCTTACAGGGAGGGTGACAGAGGACTCCGAAGAAACTaGTGTCCCCCAGGAGAGCAC +
Preference number: 4 (lower is better)
Translates to: RTHYFSCSGHHSYREGDRGLRRN*CPPGEH
Trigger: GTGCTCTCCTGGGGGACACCAGTTTCTTCGGAGTCC...TCTGTCACCCTCCCTGTAAGAATGGTGGCCACTGCATGAGAAATAATGTGTGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR CCA 90 bp CAGGGTCGCACAAAGCTGTACTACAGGTGGGTCCATACCAGCCAGGTTTGCACTATAGGAACTAAAGCTTaGGGAACACGCACACCCCCA +
Preference number: 4 (lower is better)
Translates to: QGRTKLYYRWVHTSQVCTIGTKA*GTRTPP
Trigger: TGGGGGTGTGCGTGTTCCCCAAGCTTTAGTTCCTAT...AGTGCAAACCTGGCTGGTATGGACCCACCTGTAGTACAGCTTTGTGCGACCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR CCA 90 bp ATTTCTCATGCAGTGGCCACCATTCTTACAGGGAGGGTGACAGAAAGCATTCTGTCCGCGTCCTCGTTCTaGGGTGCACCCAGTCCTTTC +
Preference number: 4 (lower is better)
Translates to: ISHAVATILTGRVTESILSASSF*GAPSPF
Trigger: GAAAGGACTGGGTGCACCCCAGAACGAGGACGCGGA...CAGAATGCTTTCTGTCACCCTCCCTGTAAGAATGGTGGCCACTGCATGAGAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR TCA 90 bp CAGGGTCGCACAAAGCTGTACTACAGGTGGGTCCATACCAGCCAGGTTTGCACTAGATGGCAGTGTTTCTaGATCTCTCAGAGACAGCCA +
Preference number: 4 (lower is better)
Translates to: QGRTKLYYRWVHTSQVCTRWQCF*ISQRQP
Trigger: TGGCTGTCTCTGAGAGATTCAGAAACACTGCCATCT...AGTGCAAACCTGGCTGGTATGGACCCACCTGTAGTACAGCTTTGTGCGACCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR TCA 90 bp AGAGAATGCCTGAACTGTGGTCTCTTGTGTCAGCTCCTCTTTGACTTCTTGAGAAGGTGGAGGTGGCAATaGGGCAGCCAGCTGACGAAC +
Preference number: 4 (lower is better)
Translates to: RECLNCGLLCQLLFDFLRRWRWQ*GSQLTN
Trigger: GTTCGTCAGCTGGCTGCCTCATTGCCACCTCCACCT...TCTCAAGAAGTCAAAGAGGAGCTGACACAAGAGACCACAGTTCAGGCATTCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326715.4
CDS-3UTR TCA 90 bp ATGGCATATGCTGGGCGCAATGCATTCACCACCGTTTTTACATTTCTGCAAGCAAGGTGGAGGTGGCAATaGGGCAGCCAGCTGACGAAC +
Preference number: 4 (lower is better)
Translates to: MAYAGRNAFTTVFTFLQARWRWQ*GSQLTN
Trigger: GTTCGTCAGCTGGCTGCCTCATTGCCACCTCCACCT...TGCTTGCAGAAATGTAAAAACGGTGGTGAATGCATTGCGCCCAGCATATGCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR TCA 90 bp AAGCCTGGACTCAATCAACTCCACCAGAACCTCTGGCCTTCCTGCAGGTGGAGGAAAAGAGAGAATGCCTaGACTGTGGTCTCTTGTGTC +
Preference number: 4 (lower is better)
Translates to: KPGLNQLHQNLWPSCRWRKRENA*TVVSCV
Trigger: GACACAAGAGACCACAGTTCAGGCATTCTCTCTTTT...CCTCCACCTGCAGGAAGGCCAGAGGTTCTGGTGGAGTTGATTGAGTCCAGGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326715.4
CDS-3UTR GCA 90 bp TGCTCCACCATGTCCTGGAAGACACTGACAAATGTTAGGCTTAATACATTTTCCTCCGCCAGGCATCGCTaGTTCCGCAGGTGGGGCGAA +
Preference number: 4 (lower is better)
Translates to: CSTMSWKTLTNVRLNTFSSARHR*FRRWGE
Trigger: TTCGCCCCACCTGCGGAAGCAGCGATGCCTGGCGGA...GGAAAATGTATTAAGCCTAACATTTGTCAGTGTCTTCCAGGACATGGTGGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR GCA 90 bp GCGTCTTATCTGTATTTTCTTCTCACATTTGACTCCAGAGTATTCAGTGCGGCATCCGCCAGGCATCGCTaGTTCCGCAGGTGGGGCGAA +
Preference number: 4 (lower is better)
Translates to: ASYLYFLLTFDSRVFSAASARHR*FRRWGE
Trigger: TTCGCCCCACCTGCGGAAGCAGCGATGCCTGGCGGA...TGCCGCACTGAATACTCTGGAGTCAAATGTGAGAAGAAAATACAGATAAGACGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR GCA 90 bp AAGCCTGGACTCAATCAACTCCACCAGAACCTCTGGCCTTCCTGCAGGTGGAGGGTGCTGAACAAAAACTaGCATGTTGCACAAGCTGTC +
Preference number: 4 (lower is better)
Translates to: KPGLNQLHQNLWPSCRWRVLNKN*HVAQAV
Trigger: GACAGCTTGTGCAACATGGCAGTTTTTGTTCAGCAC...CCTCCACCTGCAGGAAGGCCAGAGGTTCTGGTGGAGTTGATTGAGTCCAGGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326715.4
CDS-3UTR GCA 90 bp ATTACACGAACCACCATTGAGGCAGACAGGGTCGCACAAAGCTGTACTACAGGTCCATGCACTGCCCATTaGCGCTGCATAAATTGGGGC +
Preference number: 4 (lower is better)
Translates to: ITRTTIEADRVAQSCTTGPCTAH*RCINWG
Trigger: GCCCCAATTTATGCAGCGGCAATGGGCAGTGCATGG...ACCTGTAGTACAGCTTTGTGCGACCCTGTCTGCCTCAATGGTGGTTCGTGTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR GCA 90 bp TATTTGACACCGCACTCCTTCCCAGGAGGAAGGACAATGGCATATGCTGGGCGCTTCTTCATCACAGGTTaGTCCACCATGTCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: YLTPHSFPGGRTMAYAGRFFITG*STMSWK
Trigger: CTTCCAGGACATGGTGGAGCAACCTGTGATGAAGAA...GCGCCCAGCATATGCCATTGTCCTTCCTCCTGGGAAGGAGTGCGGTGTCAAATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CCA 90 bp CGCACACATTATTTCTCATGCAGTGGCCACCATTCTTACAGGGAGGGTGACAGACAGTCTGTTGCTGCTTaGAACAGGGAAGCTCCGCGT +
Preference number: 4 (lower is better)
Translates to: RTHYFSCSGHHSYREGDRQSVAA*NREAPR
Trigger: ACGCGGAGCTTCCCTGTTCCAAGCAGCAACAGACTG...TCTGTCACCCTCCCTGTAAGAATGGTGGCCACTGCATGAGAAATAATGTGTGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR CCA 90 bp GTATTTGACACCGCACTCCTTCCCAGGAGGAAGGACAATGGCATATGCTGGGCGTCGGGCCTCCTTTCTTaGATTTTCTCAGTCTGTTGC +
Preference number: 4 (lower is better)
Translates to: VFDTALLPRRKDNGICWASGLLS*IFSVCC
Trigger: GCAACAGACTGAGAAAATCCAAGAAAGGAGGCCCGA...CGCCCAGCATATGCCATTGTCCTTCCTCCTGGGAAGGAGTGCGGTGTCAAATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CCA 90 bp TGCCTCCATAAAGACATTTTGGGTTGCAAATTGGTATTTGACACCGCACTCCTTCGCTGCTTCCGCAGGTaGGGCGAAAGGCGTCGCAGA +
Preference number: 4 (lower is better)
Translates to: CLHKDILGCKLVFDTALLRCFRR*GERRRR
Trigger: TCTGCGACGCCTTTCGCCCCACCTGCGGAAGCAGCG...AAGGAGTGCGGTGTCAAATACCAATTTGCAACCCAAAATGTCTTTATGGAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CCA 90 bp GAGGAAGGACAATGGCATATGCTGGGCGCAATGCATTCACCACCGTTTTTACATGGACTCCGAAGAAACTaGTGTCCCCCAGGAGAGCAC +
Preference number: 4 (lower is better)
Translates to: EEGQWHMLGAMHSPPFLHGLRRN*CPPGEH
Trigger: GTGCTCTCCTGGGGGACACCAGTTTCTTCGGAGTCC...ATGTAAAAACGGTGGTGAATGCATTGCGCCCAGCATATGCCATTGTCCTTCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CCA 90 bp AGAAAAGCCTGGACTCAATCAACTCCACCAGAACCTCTGGCCTTCCTGCAGGTGCTCAACACATTTGGTTaGCATCTCGGCAGGTCTGTC +
Preference number: 4 (lower is better)
Translates to: RKAWTQSTPPEPLAFLQVLNTFG*HLGRSV
Trigger: GACAGACCTGCCGAGATGCCAACCAAATGTGTTGAG...CACCTGCAGGAAGGCCAGAGGTTCTGGTGGAGTTGATTGAGTCCAGGCTTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326715.4
CDS-3UTR CCA 90 bp TATTTGACACCGCACTCCTTCCCAGGAGGAAGGACAATGGCATATGCTGGGCGCTTCCTATGCTGGAGTTaGCTAGAGTCTCCTGACAGA +
Preference number: 4 (lower is better)
Translates to: YLTPHSFPGGRTMAYAGRFLCWS*LESPDR
Trigger: TCTGTCAGGAGACTCTAGCCAACTCCAGCATAGGAA...GCGCCCAGCATATGCCATTGTCCTTCCTCCTGGGAAGGAGTGCGGTGTCAAATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CCA 90 bp ACACCGCACTCCTTCCCAGGAGGAAGGACAATGGCATATGCTGGGCGCAATGCAACATTTGCAGATGTTTaGGGCAACACACTCCCTACT +
Preference number: 4 (lower is better)
Translates to: TPHSFPGGRTMAYAGRNATFADV*GNTLPT
Trigger: AGTAGGGAGTGTGTTGCCCCAAACATCTGCAAATGT...TGCATTGCGCCCAGCATATGCCATTGTCCTTCCTCCTGGGAAGGAGTGCGGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CCA 90 bp GAAGGACAATGGCATATGCTGGGCGCAATGCATTCACCACCGTTTTTACATTTCTCCGCGTCCTCGTTCTaGGGTGCACCCAGTCCTTTC +
Preference number: 4 (lower is better)
Translates to: EGQWHMLGAMHSPPFLHFSASSF*GAPSPF
Trigger: GAAAGGACTGGGTGCACCCCAGAACGAGGACGCGGA...GAAATGTAAAAACGGTGGTGAATGCATTGCGCCCAGCATATGCCATTGTCCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR TCA 90 bp ATAAGGACAAGTGCAGAGATTCCCAGCCAAGCATGTGCCACCATGTTGACAAGGCTGCTGGAGGTGCCATaGGTCAAAACGGACACTTCT +
Preference number: 4 (lower is better)
Translates to: IRTSAEIPSQACATMLTRLLEVP*VKTDTS
Trigger: AGAAGTGTCCGTTTTGACTCATGGCACCTCCAGCAG...CCTTGTCAACATGGTGGCACATGCTTGGCTGGGAATCTCTGCACTTGTCCTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR TCA 90 bp CCAGGAGGAAGGACAATGGCATATGCTGGGCGCAATGCATTCACCACCGTTTTTAAGCTGTCAATTGCTTaGTCTCCCCAGGAGATGGCA +
Preference number: 4 (lower is better)
Translates to: PGGRTMAYAGRNAFTTVFKLSIA*SPQEMA
Trigger: TGCCATCTCCTGGGGAGATCAAGCAATTGACAGCTT...AAAAACGGTGGTGAATGCATTGCGCCCAGCATATGCCATTGTCCTTCCTCCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR TCA 90 bp TATTTGACACCGCACTCCTTCCCAGGAGGAAGGACAATGGCATATGCTGGGCGCAAAAGAGAGAATGCCTaGACTGTGGTCTCTTGTGTC +
Preference number: 4 (lower is better)
Translates to: YLTPHSFPGGRTMAYAGRKRENA*TVVSCV
Trigger: GACACAAGAGACCACAGTTCAGGCATTCTCTCTTTT...GCGCCCAGCATATGCCATTGTCCTTCCTCCTGGGAAGGAGTGCGGTGTCAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR TCA 90 bp TGGTATTTGACACCGCACTCCTTCCCAGGAGGAAGGACAATGGCATATGCTGGGCATGTGCCACCATGTTaGCAAGGTGGGTTACAATGT +
Preference number: 4 (lower is better)
Translates to: WYLTPHSFPGGRTMAYAGHVPPC*QGGLQC
Trigger: ACATTGTAACCCACCTTGTCAACATGGTGGCACATG...CCCAGCATATGCCATTGTCCTTCCTCCTGGGAAGGAGTGCGGTGTCAAATACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR TCA 90 bp CAGTGTATCCTTCACGACAGACGCACACATTATTTCTCATGCAGTGGCCACCATTACACGAACCACCATTaGGGCAGACAGGGTCGCACA +
Preference number: 4 (lower is better)
Translates to: QCILHDRRTHYFSCSGHHYTNHH*GRQGRT
Trigger: TGTGCGACCCTGTCTGCCTCAATGGTGGTTCGTGTA...ATGGTGGCCACTGCATGAGAAATAATGTGTGCGTCTGTCGTGAAGGATACACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR TCA 90 bp TGGTATTTGACACCGCACTCCTTCCCAGGAGGAAGGACAATGGCATATGCTGGGTTGCAAATTGGTATTTaGCACCGCACTCCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: WYLTPHSFPGGRTMAYAGLQIGI*HRTPSQ
Trigger: CTGGGAAGGAGTGCGGTGTCAAATACCAATTTGCAA...CCCAGCATATGCCATTGTCCTTCCTCCTGGGAAGGAGTGCGGTGTCAAATACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR GCA 90 bp CTACAGGTGGGTCCATACCAGCCAGGTTTGCACTGGCAAATATCTGGTGTAAGAGCTGACTGCTGGAGGTaGCATGAGTCAAAACGGACA +
Preference number: 4 (lower is better)
Translates to: LQVGPYQPGLHWQISGVRADCWR*HESKRT
Trigger: TGTCCGTTTTGACTCATGGCACCTCCAGCAGTCAGC...TCTTACACCAGATATTTGCCAGTGCAAACCTGGCTGGTATGGACCCACCTGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR GCA 90 bp GCAGATAGGTGTGTTGCATCGTTTCCCACTCCAACCAGAAGGACAAGAGCAAGTGCTGACTGCTGGAGGTaGCATGAGTCAAAACGGACA +
Preference number: 4 (lower is better)
Translates to: ADRCVASFPTPTRRTRASADCWR*HESKRT
Trigger: TGTCCGTTTTGACTCATGGCACCTCCAGCAGTCAGC...ACTTGCTCTTGTCCTTCTGGTTGGAGTGGGAAACGATGCAACACACCTATCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR GCA 90 bp AGAAAAGCCTGGACTCAATCAACTCCACCAGAACCTCTGGCCTTCCTGCAGGTGGCACAAGCTGTCAATTaGTTGATCTCCCCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: RKAWTQSTPPEPLAFLQVAQAVN*LISPGD
Trigger: ATCTCCTGGGGAGATCAAGCAATTGACAGCTTGTGC...CACCTGCAGGAAGGCCAGAGGTTCTGGTGGAGTTGATTGAGTCCAGGCTTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326715.4
CDS-3UTR GCA 90 bp AAGCCTGGACTCAATCAACTCCACCAGAACCTCTGGCCTTCCTGCAGGTGGAGGAAAAGACAGAAGCGCTaGAGAATATCCTGTCTCCAA +
Preference number: 4 (lower is better)
Translates to: KPGLNQLHQNLWPSCRWRKRQKR*RISCLQ
Trigger: TTGGAGACAGGATATTCTGCAGCGCTTCTGTCTTTT...CCTCCACCTGCAGGAAGGCCAGAGGTTCTGGTGGAGTTGATTGAGTCCAGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326715.4
CDS-3UTR GCA 90 bp CAGGAGGAAGGACAATGGCATATGCTGGGCGCAATGCATTCACCACCGTTTTTACCCCATTCCATGCACTaGCCATTGCCGCTGCATAAA +
Preference number: 4 (lower is better)
Translates to: QEEGQWHMLGAMHSPPFLPHSMH*PLPLHK
Trigger: TTTATGCAGCGGCAATGGGCAGTGCATGGAATGGGG...TAAAAACGGTGGTGAATGCATTGCGCCCAGCATATGCCATTGTCCTTCCTCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR GCA 90 bp ATGGTGAAGGCATTTCCACTTGTTGGCTTAACATGCCTCTTTCTCCCTTGGGCACCACTTCACAAAGGCTaGCATGGAAGCCAGGCAAGC +
Preference number: 4 (lower is better)
Translates to: MVKAFPLVGLTCLFLPWAPLHKG*HGSQAS
Trigger: GCTTGCCTGGCTTCCATGGCAGCCTTTGTGAAGTGG...TGCCCAAGGGAGAAAGAGGCATGTTAAGCCAACAAGTGGAAATGCCTTCACCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR GCA 90 bp GAGGAAGGACAATGGCATATGCTGGGCGCAATGCATTCACCACCGTTTTTACATCCACTTCACAAAGGCTaGCATGGAAGCCAGGCAAGC +
Preference number: 4 (lower is better)
Translates to: EEGQWHMLGAMHSPPFLHPLHKG*HGSQAS
Trigger: GCTTGCCTGGCTTCCATGGCAGCCTTTGTGAAGTGG...ATGTAAAAACGGTGGTGAATGCATTGCGCCCAGCATATGCCATTGTCCTTCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CCA 90 bp TGTGGTCTCTTGTGTCAGCTCCTCTTTGACTTCTTGAGAAGAAAGCCTAGACCAGGACTCCGAAGAAACTaGTGTCCCCCAGGAGAGCAC +
Preference number: 4 (lower is better)
Translates to: CGLLCQLLFDFLRRKPRPGLRRN*CPPGEH
Trigger: GTGCTCTCCTGGGGGACACCAGTTTCTTCGGAGTCC...TGGTCTAGGCTTTCTTCTCAAGAAGTCAAAGAGGAGCTGACACAAGAGACCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326715.4
CDS-3UTR CCA 90 bp AACACCTACAGAAAAGCCTGGACTCAATCAACTCCACCAGAACCTCTGGCCTTCTCAGAGACAGCCAGATaGGGGCCTGAGTTCCACAAT +
Preference number: 4 (lower is better)
Translates to: NTYRKAWTQSTPPEPLAFSETAR*GPEFHN
Trigger: ATTGTGGAACTCAGGCCCCCATCTGGCTGTCTCTGA...GAAGGCCAGAGGTTCTGGTGGAGTTGATTGAGTCCAGGCTTTTCTGTAGGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326715.4
CDS-3UTR CCA 90 bp GCATCTGCCTCCATAAAGACATTTTGGGTTGCAAATTGGTATTTGACACCGCACCTCCACCAGAACCTCTaGCCTTCCTGCAGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: ASASIKTFWVANWYLTPHLHQNL*PSCRWR
Trigger: CCTCCACCTGCAGGAAGGCCAGAGGTTCTGGTGGAG...GTGCGGTGTCAAATACCAATTTGCAACCCAAAATGTCTTTATGGAGGCAGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CCA 90 bp CAGGAGGAAGGACAATGGCATATGCTGGGCGCAATGCATTCACCACCGTTTTTATCACAAAGGCTGCCATaGAAGCCAGGCAAGCAGACA +
Preference number: 4 (lower is better)
Translates to: QEEGQWHMLGAMHSPPFLSQRLP*KPGKQT
Trigger: TGTCTGCTTGCCTGGCTTCCATGGCAGCCTTTGTGA...TAAAAACGGTGGTGAATGCATTGCGCCCAGCATATGCCATTGTCCTTCCTCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CCA 90 bp GCAGATAGGTGTGTTGCATCGTTTCCCACTCCAACCAGAAGGACAAGAGCAAGTCAGGAGGAAGGACAATaGCATATGCTGGGCGCAATG +
Preference number: 4 (lower is better)
Translates to: ADRCVASFPTPTRRTRASQEEGQ*HMLGAM
Trigger: CATTGCGCCCAGCATATGCCATTGTCCTTCCTCCTG...ACTTGCTCTTGTCCTTCTGGTTGGAGTGGGAAACGATGCAACACACCTATCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CCA 90 bp ACACCGCACTCCTTCCCAGGAGGAAGGACAATGGCATATGCTGGGCGCAATGCATTTTGGGTTGCAAATTaGTATTTGACACCGCACTCC +
Preference number: 4 (lower is better)
Translates to: TPHSFPGGRTMAYAGRNAFWVAN*YLTPHS
Trigger: GGAGTGCGGTGTCAAATACCAATTTGCAACCCAAAA...TGCATTGCGCCCAGCATATGCCATTGTCCTTCCTCCTGGGAAGGAGTGCGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CCA 90 bp AGAAAAGCCTGGACTCAATCAACTCCACCAGAACCTCTGGCCTTCCTGCAGGTGGGGACTTTACAATCTTaGCAAAGAACCCTTCCGCAC +
Preference number: 4 (lower is better)
Translates to: RKAWTQSTPPEPLAFLQVGTLQS*QRTLPH
Trigger: GTGCGGAAGGGTTCTTTGCCAAGATTGTAAAGTCCC...CACCTGCAGGAAGGCCAGAGGTTCTGGTGGAGTTGATTGAGTCCAGGCTTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326715.4
CDS-3UTR CCA 90 bp CGCACACATTATTTCTCATGCAGTGGCCACCATTCTTACAGGGAGGGTGACAGAACTATTCACAGTGGCTaGCTGCCCAAGGAGTGCTGT +
Preference number: 4 (lower is better)
Translates to: RTHYFSCSGHHSYREGDRTIHSG*LPKECC
Trigger: ACAGCACTCCTTGGGCAGCCAGCCACTGTGAATAGT...TCTGTCACCCTCCCTGTAAGAATGGTGGCCACTGCATGAGAAATAATGTGTGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452576.6
CDS-3UTR TCA 90 bp TATTTGACACCGCACTCCTTCCCAGGAGGAAGGACAATGGCATATGCTGGGCGCTCCTCTTTGACTTCTTaGGAAGAAAGCCTAGACCAA +
Preference number: 4 (lower is better)
Translates to: YLTPHSFPGGRTMAYAGRSSLTS*EESLDQ
Trigger: TTGGTCTAGGCTTTCTTCTCAAGAAGTCAAAGAGGA...GCGCCCAGCATATGCCATTGTCCTTCCTCCTGGGAAGGAGTGCGGTGTCAAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR TCA 90 bp GAGGAAGGACAATGGCATATGCTGGGCGCAATGCATTCACCACCGTTTTTACATCCAGATCCGTTTGGCTaGGACTCGGGAAAGCAAACA +
Preference number: 4 (lower is better)
Translates to: EEGQWHMLGAMHSPPFLHPDPFG*DSGKQT
Trigger: TGTTTGCTTTCCCGAGTCTCAGCCAAACGGATCTGG...ATGTAAAAACGGTGGTGAATGCATTGCGCCCAGCATATGCCATTGTCCTTCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR TCA 90 bp CATTTTCCATGGTTTTTGCAATCAGGGTCACAAAGAGCAGTTTGGCAGTTAGAAAGGTGCTATACTCGGTaGGGCCAGAGGGAGTGGGCC +
Preference number: 4 (lower is better)
Translates to: HFPWFLQSGSQRAVWQLERCYTR*GQREWA
Trigger: GGCCCACTCCCTCTGGCCTCACCGAGTATAGCACCT...TTCTAACTGCCAAACTGCTCTTTGTGACCCTGATTGCAAAAACCATGGAAAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR TCA 90 bp ACACCGCACTCCTTCCCAGGAGGAAGGACAATGGCATATGCTGGGCGCAATGCAGAGAATGTCTTCAATTaGTGTGCCATACTCTTCTGT +
Preference number: 4 (lower is better)
Translates to: TPHSFPGGRTMAYAGRNAENVFN*CAILFC
Trigger: ACAGAAGAGTATGGCACATCAATTGAAGACATTCTC...TGCATTGCGCCCAGCATATGCCATTGTCCTTCCTCCTGGGAAGGAGTGCGGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR TCA 90 bp CAGGAGGAAGGACAATGGCATATGCTGGGCGCAATGCATTCACCACCGTTTTTAACATCAGTGGGCAGCTaGCAATCAACAGCTCTGCTA +
Preference number: 4 (lower is better)
Translates to: QEEGQWHMLGAMHSPPFLTSVGS*QSTALL
Trigger: TAGCAGAGCTGTTGATTGTCAGCTGCCCACTGATGT...TAAAAACGGTGGTGAATGCATTGCGCCCAGCATATGCCATTGTCCTTCCTCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR TCA 90 bp ATGGCATATGCTGGGCGCAATGCATTCACCACCGTTTTTACATTTCTGCAAGCATACACGAACCACCATTaGGGCAGACAGGGTCGCACA +
Preference number: 4 (lower is better)
Translates to: MAYAGRNAFTTVFTFLQAYTNHH*GRQGRT
Trigger: TGTGCGACCCTGTCTGCCTCAATGGTGGTTCGTGTA...TGCTTGCAGAAATGTAAAAACGGTGGTGAATGCATTGCGCCCAGCATATGCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR GCA 90 bp TGGTATTTGACACCGCACTCCTTCCCAGGAGGAAGGACAATGGCATATGCTGGGATTTTCTCAGTCTGTTaGTGCTTGGAACAGGGAAGC +
Preference number: 4 (lower is better)
Translates to: WYLTPHSFPGGRTMAYAGIFSVC*CLEQGS
Trigger: GCTTCCCTGTTCCAAGCAGCAACAGACTGAGAAAAT...CCCAGCATATGCCATTGTCCTTCCTCCTGGGAAGGAGTGCGGTGTCAAATACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR GCA 90 bp CAGTGTATCCTTCACGACAGACGCACACATTATTTCTCATGCAGTGGCCACCATGCTGACTGCTGGAGGTaGCATGAGTCAAAACGGACA +
Preference number: 4 (lower is better)
Translates to: QCILHDRRTHYFSCSGHHADCWR*HESKRT
Trigger: TGTCCGTTTTGACTCATGGCACCTCCAGCAGTCAGC...ATGGTGGCCACTGCATGAGAAATAATGTGTGCGTCTGTCGTGAAGGATACACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR GCA 90 bp ATTACACGAACCACCATTGAGGCAGACAGGGTCGCACAAAGCTGTACTACAGGTGACACAGCCTTCCTATaGTGGAGTTGGCTAGAGTCT +
Preference number: 4 (lower is better)
Translates to: ITRTTIEADRVAQSCTTGDTAFL*WSWLES
Trigger: AGACTCTAGCCAACTCCAGCATAGGAAGGCTGTGTC...ACCTGTAGTACAGCTTTGTGCGACCCTGTCTGCCTCAATGGTGGTTCGTGTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR GCA 90 bp CCAGGAGGAAGGACAATGGCATATGCTGGGCGCAATGCATTCACCACCGTTTTTGGCCACACCTGCTTCTaGCCAACTAAGATCATCTTT +
Preference number: 4 (lower is better)
Translates to: PGGRTMAYAGRNAFTTVFGHTCF*PTKIIF
Trigger: AAAGATGATCTTAGTTGGGCAGAAGCAGGTGTGGCC...AAAAACGGTGGTGAATGCATTGCGCCCAGCATATGCCATTGTCCTTCCTCCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR GCA 90 bp GCGTCTTATCTGTATTTTCTTCTCACATTTGACTCCAGAGTATTCAGTGCGGCACACACCCCCATTCCATaGACTGCCCATTGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: ASYLYFLLTFDSRVFSAAHTPIP*TAHCRC
Trigger: GCAGCGGCAATGGGCAGTGCATGGAATGGGGGTGTG...TGCCGCACTGAATACTCTGGAGTCAAATGTGAGAAGAAAATACAGATAAGACGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR GCA 90 bp TGGTCCTACAAAACCATAAGGACAAGTGCAGAGATTCCCAGCCAAGCATGTGCCCCACATAAAAAGCCCTaGAGAGGAAACACTTGCCCC +
Preference number: 4 (lower is better)
Translates to: WSYKTIRTSAEIPSQACAPHKKP*RGNTCP
Trigger: GGGGCAAGTGTTTCCTCTGCAGGGCTTTTTATGTGG...GGCACATGCTTGGCTGGGAATCTCTGCACTTGTCCTTATGGTTTTGTAGGACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR GCA 90 bp GGACAGAGGCAAGTATTTGGCTTATTACACGAACCACCATTGAGGCAGACAGGGCCACATAAAAAGCCCTaGAGAGGAAACACTTGCCCC +
Preference number: 4 (lower is better)
Translates to: GQRQVFGLLHEPPLRQTGPHKKP*RGNTCP
Trigger: GGGGCAAGTGTTTCCTCTGCAGGGCTTTTTATGTGG...CCCTGTCTGCCTCAATGGTGGTTCGTGTAATAAGCCAAATACTTGCCTCTGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR GCA 90 bp TATTTGACACCGCACTCCTTCCCAGGAGGAAGGACAATGGCATATGCTGGGCGCAACCAGGTTTACATTTaGAGATGTTTGGGGCAACAC +
Preference number: 4 (lower is better)
Translates to: YLTPHSFPGGRTMAYAGRNQVYI*RCLGQH
Trigger: GTGTTGCCCCAAACATCTGCAAATGTAAACCTGGTT...GCGCCCAGCATATGCCATTGTCCTTCCTCCTGGGAAGGAGTGCGGTGTCAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR GCA 90 bp TTCTTCCAGATCCGTTTGGCTGAGACTCGGGAAAGCAAACAAAGGAGGAAACTCTCCCAGCCAAGCATGTaGCACCATGTTGACAAGGTG +
Preference number: 4 (lower is better)
Translates to: FFQIRLAETRESKQRRKLSQPSM*HHVDKV
Trigger: CACCTTGTCAACATGGTGGCACATGCTTGGCTGGGA...GAGTTTCCTCCTTTGTTTGCTTTCCCGAGTCTCAGCCAAACGGATCTGGAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521169.5
CDS-3UTR GCA 90 bp TCAGATACACATGATCCACCATTCAAGCAATCACAAGACTTCACAGTCACCTCAGTCCTCGTTCTGGGGTaGACCCAGTCCTTTCGTGGG +
Preference number: 4 (lower is better)
Translates to: SDTHDPPFKQSQDFTVTSVLVLG*TQSFRG
Trigger: CCCACGAAAGGACTGGGTGCACCCCAGAACGAGGAC...TGAGGTGACTGTGAAGTCTTGTGATTGCTTGAATGGTGGATCATGTGTATCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521169.5
CDS-3UTR CCA 90 bp GCATCTGCCTCCATAAAGACATTTTGGGTTGCAAATTGGTATTTGACACCGCACGGACTCCGAAGAAACTaGTGTCCCCCAGGAGAGCAC +
Preference number: 4 (lower is better)
Translates to: ASASIKTFWVANWYLTPHGLRRN*CPPGEH
Trigger: GTGCTCTCCTGGGGGACACCAGTTTCTTCGGAGTCC...GTGCGGTGTCAAATACCAATTTGCAACCCAAAATGTCTTTATGGAGGCAGATGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CCA 90 bp TGCTCCACCATGTCCTGGAAGACACTGACAAATGTTAGGCTTAATACATTTTCCCTCCACCAGAACCTCTaGCCTTCCTGCAGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: CSTMSWKTLTNVRLNTFSLHQNL*PSCRWR
Trigger: CCTCCACCTGCAGGAAGGCCAGAGGTTCTGGTGGAG...GGAAAATGTATTAAGCCTAACATTTGTCAGTGTCTTCCAGGACATGGTGGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR CCA 90 bp CGCACACATTATTTCTCATGCAGTGGCCACCATTCTTACAGGGAGGGTGACAGATCTTCCAGATCCGTTTaGCTGAGACTCGGGAAAGCA +
Preference number: 4 (lower is better)
Translates to: RTHYFSCSGHHSYREGDRSSRSV*LRLGKA
Trigger: TGCTTTCCCGAGTCTCAGCCAAACGGATCTGGAAGA...TCTGTCACCCTCCCTGTAAGAATGGTGGCCACTGCATGAGAAATAATGTGTGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR CCA 90 bp ATAAGGACAAGTGCAGAGATTCCCAGCCAAGCATGTGCCACCATGTTGACAAGGACAGCCTTCCTATGCTaGAGTTGGCTAGAGTCTCCT +
Preference number: 4 (lower is better)
Translates to: IRTSAEIPSQACATMLTRTAFLC*SWLESP
Trigger: AGGAGACTCTAGCCAACTCCAGCATAGGAAGGCTGT...CCTTGTCAACATGGTGGCACATGCTTGGCTGGGAATCTCTGCACTTGTCCTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR CCA 90 bp TGGTATTTGACACCGCACTCCTTCCCAGGAGGAAGGACAATGGCATATGCTGGGCAGTCTGTGTATAGATaGGTTCTCCAGGCATCCATT +
Preference number: 4 (lower is better)
Translates to: WYLTPHSFPGGRTMAYAGQSVYR*VLQASI
Trigger: AATGGATGCCTGGAGAACCCATCTATACACAGACTG...CCCAGCATATGCCATTGTCCTTCCTCCTGGGAAGGAGTGCGGTGTCAAATACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CCA 90 bp ACACATTATTTCTCATGCAGTGGCCACCATTCTTACAGGGAGGGTGACAGAAAGCTGCCACTTCCCAGTTaGTTTCCCACCCACCAGATC +
Preference number: 4 (lower is better)
Translates to: THYFSCSGHHSYREGDRKLPLPS*FPTHQI
Trigger: GATCTGGTGGGTGGGAAACCAACTGGGAAGTGGCAG...CTTTCTGTCACCCTCCCTGTAAGAATGGTGGCCACTGCATGAGAAATAATGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR CCA 90 bp CTACAGGTGGGTCCATACCAGCCAGGTTTGCACTGGCAAATATCTGGTGTAAGAGATGTCAGAACCTTCTaGATCGAAGGCCACGAACTG +
Preference number: 4 (lower is better)
Translates to: LQVGPYQPGLHWQISGVRDVRTF*IEGHEL
Trigger: CAGTTCGTGGCCTTCGATCCAGAAGGTTCTGACATC...TCTTACACCAGATATTTGCCAGTGCAAACCTGGCTGGTATGGACCCACCTGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR CCA 90 bp TATTTGACACCGCACTCCTTCCCAGGAGGAAGGACAATGGCATATGCTGGGCGCGAGTCCAACGTAAAATaGATGTCAGAACCTTCTGGA +
Preference number: 4 (lower is better)
Translates to: YLTPHSFPGGRTMAYAGRESNVK*MSEPSG
Trigger: TCCAGAAGGTTCTGACATCCATTTTACGTTGGACTC...GCGCCCAGCATATGCCATTGTCCTTCCTCCTGGGAAGGAGTGCGGTGTCAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CCA 90 bp AATTGGTATTTGACACCGCACTCCTTCCCAGGAGGAAGGACAATGGCATATGCTTCACAAAGGCTGCCATaGAAGCCAGGCAAGCAGACA +
Preference number: 4 (lower is better)
Translates to: NWYLTPHSFPGGRTMAYASQRLP*KPGKQT
Trigger: TGTCTGCTTGCCTGGCTTCCATGGCAGCCTTTGTGA...AGCATATGCCATTGTCCTTCCTCCTGGGAAGGAGTGCGGTGTCAAATACCAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CCA 90 bp GGACAGAGGCAAGTATTTGGCTTATTACACGAACCACCATTGAGGCAGACAGGGCCACAAGGGTTGGATTaGCACCCACTAATGTCCACT +
Preference number: 4 (lower is better)
Translates to: GQRQVFGLLHEPPLRQTGPQGLD*HPLMST
Trigger: AGTGGACATTAGTGGGTGCCAATCCAACCCTTGTGG...CCCTGTCTGCCTCAATGGTGGTTCGTGTAATAAGCCAAATACTTGCCTCTGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR CCA 90 bp GCAGATAGGTGTGTTGCATCGTTTCCCACTCCAACCAGAAGGACAAGAGCAAGTCCACAAGGGTTGGATTaGCACCCACTAATGTCCACT +
Preference number: 4 (lower is better)
Translates to: ADRCVASFPTPTRRTRASPQGLD*HPLMST
Trigger: AGTGGACATTAGTGGGTGCCAATCCAACCCTTGTGG...ACTTGCTCTTGTCCTTCTGGTTGGAGTGGGAAACGATGCAACACACCTATCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CCA 90 bp GCAGATAGGTGTGTTGCATCGTTTCCCACTCCAACCAGAAGGACAAGAGCAAGTAAGCTGTACTACAGGTaGGTCCATACCAGCCAGGTT +
Preference number: 4 (lower is better)
Translates to: ADRCVASFPTPTRRTRASKLYYR*VHTSQV
Trigger: AACCTGGCTGGTATGGACCCACCTGTAGTACAGCTT...ACTTGCTCTTGTCCTTCTGGTTGGAGTGGGAAACGATGCAACACACCTATCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CCA 90 bp GTATTTGACACCGCACTCCTTCCCAGGAGGAAGGACAATGGCATATGCTGGGCGTTATTTCTCATGCAGTaGCCACCATTCTTACAGGGA +
Preference number: 4 (lower is better)
Translates to: VFDTALLPRRKDNGICWALFLMQ*PPFLQG
Trigger: TCCCTGTAAGAATGGTGGCCACTGCATGAGAAATAA...CGCCCAGCATATGCCATTGTCCTTCCTCCTGGGAAGGAGTGCGGTGTCAAATAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CCA 90 bp ACATTTCTGCAAGCAGATAGGTGTGTTGCATCGTTTCCCACTCCAACCAGAAGGCTGAACTATTCACAGTaGCTGGCTGCCCAAGGAGTG +
Preference number: 4 (lower is better)
Translates to: TFLQADRCVASFPTPTRRLNYSQ*LAAQGV
Trigger: CACTCCTTGGGCAGCCAGCCACTGTGAATAGTTCAG...CCTTCTGGTTGGAGTGGGAAACGATGCAACACACCTATCTGCTTGCAGAAATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452576.6
3UTR CAA 72 bp AAAGCTGTACTACAGGTGGGTCCATACCAGCCAGGTTaGCACTGGCAAATATCTGGTGTAAGACACTGGCCT +
Preference number: 4 (lower is better)
Translates to: KAVLQVGPYQPG*HWQISGVRHWP
Trigger: AGGCCAGTGTCTTACACCAGATATTTGCCAGTGCAAACCTGGCTGGTATGGACCCACCTGTAGTACAGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR TCA 90 bp TTACATTTCTGCAAGCAGATAGGTGTGTTGCATCGTTTCCCACTCCAACCAGAAAGCCAGATGGGGGCCTaGGTTCCACAATGGTTCATC +
Preference number: 4 (lower is better)
Translates to: LHFCKQIGVLHRFPLQPESQMGA*VPQWFI
Trigger: GATGAACCATTGTGGAACTCAGGCCCCCATCTGGCT...TTCTGGTTGGAGTGGGAAACGATGCAACACACCTATCTGCTTGCAGAAATGTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR TCA 90 bp TGGTATTTGACACCGCACTCCTTCCCAGGAGGAAGGACAATGGCATATGCTGGGACAGACACTGGGATTTaGAAGAGACAGCAGTCTTTT +
Preference number: 4 (lower is better)
Translates to: WYLTPHSFPGGRTMAYAGTDTGI*KRQQSF
Trigger: AAAAGACTGCTGTCTCTTTCAAATCCCAGTGTCTGT...CCCAGCATATGCCATTGTCCTTCCTCCTGGGAAGGAGTGCGGTGTCAAATACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR TCA 90 bp AGAAAAGCCTGGACTCAATCAACTCCACCAGAACCTCTGGCCTTCCTGCAGGTGTCCTCTTTGACTTCTTaGGAAGAAAGCCTAGACCAA +
Preference number: 4 (lower is better)
Translates to: RKAWTQSTPPEPLAFLQVSSLTS*EESLDQ
Trigger: TTGGTCTAGGCTTTCTTCTCAAGAAGTCAAAGAGGA...CACCTGCAGGAAGGCCAGAGGTTCTGGTGGAGTTGATTGAGTCCAGGCTTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326715.4
CDS-3UTR TCA 90 bp CCAGGAGGAAGGACAATGGCATATGCTGGGCGCAATGCATTCACCACCGTTTTTAAAAGAGAGAATGCCTaGACTGTGGTCTCTTGTGTC +
Preference number: 4 (lower is better)
Translates to: PGGRTMAYAGRNAFTTVFKRENA*TVVSCV
Trigger: GACACAAGAGACCACAGTTCAGGCATTCTCTCTTTT...AAAAACGGTGGTGAATGCATTGCGCCCAGCATATGCCATTGTCCTTCCTCCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR TCA 90 bp TCAATCAACTCCACCAGAACCTCTGGCCTTCCTGCAGGTGGAGGTGGCAATGAGGCTACACTTTGTACATaGGGATTCTCCAAGAAAAAG +
Preference number: 4 (lower is better)
Translates to: SINSTRTSGLPAGGGGNEATLCT*GFSKKK
Trigger: CTTTTTCTTGGAGAATCCTCATGTACAAAGTGTAGC...CTCATTGCCACCTCCACCTGCAGGAAGGCCAGAGGTTCTGGTGGAGTTGATTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326715.4
CDS-3UTR TCA 90 bp GTATTTGACACCGCACTCCTTCCCAGGAGGAAGGACAATGGCATATGCTGGGCGAGGTGCTCTCTACCTTaGCCAATAGTTTTCAGTTTT +
Preference number: 4 (lower is better)
Translates to: VFDTALLPRRKDNGICWARCSLP*PIVFSF
Trigger: AAAACTGAAAACTATTGGTCAAGGTAGAGAGCACCT...CGCCCAGCATATGCCATTGTCCTTCCTCCTGGGAAGGAGTGCGGTGTCAAATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452576.6
CDS-3UTR TCA 90 bp AATTGGTATTTGACACCGCACTCCTTCCCAGGAGGAAGGACAATGGCATATGCTGGATGGCTTTCCAGGTaGTGTCATAGAAACTGGCAG +
Preference number: 4 (lower is better)
Translates to: NWYLTPHSFPGGRTMAYAGWLSR*CHRNWQ
Trigger: CTGCCAGTTTCTATGACATCACCTGGAAAGCCATCC...AGCATATGCCATTGTCCTTCCTCCTGGGAAGGAGTGCGGTGTCAAATACCAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR TCA 90 bp ACACATTATTTCTCATGCAGTGGCCACCATTCTTACAGGGAGGGTGACAGAAAGCCAGATCCGTTTGGCTaGGACTCGGGAAAGCAAACA +
Preference number: 4 (lower is better)
Translates to: THYFSCSGHHSYREGDRKPDPFG*DSGKQT
Trigger: TGTTTGCTTTCCCGAGTCTCAGCCAAACGGATCTGG...CTTTCTGTCACCCTCCCTGTAAGAATGGTGGCCACTGCATGAGAAATAATGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR TCA 90 bp CAATGGCGTCTTATCTGTATTTTCTTCTCACATTTGACTCCAGAGTATTCAGTGAGGTGCTATACTCGGTaGGGCCAGAGGGAGTGGGCC +
Preference number: 4 (lower is better)
Translates to: QWRLICIFFSHLTPEYSVRCYTR*GQREWA
Trigger: GGCCCACTCCCTCTGGCCTCACCGAGTATAGCACCT...CACTGAATACTCTGGAGTCAAATGTGAGAAGAAAATACAGATAAGACGCCATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR TCA 90 bp GGACAATGGCATATGCTGGGCGCAATGCATTCACCACCGTTTTTACATTTCTGCACATCAGTGGGCAGCTaGCAATCAACAGCTCTGCTA +
Preference number: 4 (lower is better)
Translates to: GQWHMLGAMHSPPFLHFCTSVGS*QSTALL
Trigger: TAGCAGAGCTGTTGATTGTCAGCTGCCCACTGATGT...GCAGAAATGTAAAAACGGTGGTGAATGCATTGCGCCCAGCATATGCCATTGTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR TCA 90 bp ATTTCTCATGCAGTGGCCACCATTCTTACAGGGAGGGTGACAGAAAGCATTCTGTTGTCTTGCAATGCTTaGATCACTGGGGGCTGGTTG +
Preference number: 4 (lower is better)
Translates to: ISHAVATILTGRVTESILLSCNA*ITGGWL
Trigger: CAACCAGCCCCCAGTGATTCAAGCATTGCAAGACAA...CAGAATGCTTTCTGTCACCCTCCCTGTAAGAATGGTGGCCACTGCATGAGAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR TCA 90 bp AACAGCTCTGCTATTGTGGAAAACAGTCTGTGTATAGATGGGTTCTCCAGGCATTACACGAACCACCATTaGGGCAGACAGGGTCGCACA +
Preference number: 4 (lower is better)
Translates to: NSSAIVENSLCIDGFSRHYTNHH*GRQGRT
Trigger: TGTGCGACCCTGTCTGCCTCAATGGTGGTTCGTGTA...ATGCCTGGAGAACCCATCTATACACAGACTGTTTTCCACAATAGCAGAGCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521169.5
CDS-3UTR TCA 90 bp CTACAGGTGGGTCCATACCAGCCAGGTTTGCACTGGCAAATATCTGGTGTAAGATTGCAAATTGGTATTTaGCACCGCACTCCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: LQVGPYQPGLHWQISGVRLQIGI*HRTPSQ
Trigger: CTGGGAAGGAGTGCGGTGTCAAATACCAATTTGCAA...TCTTACACCAGATATTTGCCAGTGCAAACCTGGCTGGTATGGACCCACCTGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR TCA 90 bp ACACCGCACTCCTTCCCAGGAGGAAGGACAATGGCATATGCTGGGCGCAATGCACTACTAGCCCTTTTGTaGTTTCTATCAAAAGACACA +
Preference number: 4 (lower is better)
Translates to: TPHSFPGGRTMAYAGRNALLALL*FLSKDT
Trigger: TGTGTCTTTTGATAGAAATCACAAAAGGGCTAGTAG...TGCATTGCGCCCAGCATATGCCATTGTCCTTCCTCCTGGGAAGGAGTGCGGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452576.6
CDS-3UTR GCA 90 bp AAATTGGTATTTGACACCGCACTCCTTCCCAGGAGGAAGGACAATGGCATATGCTTCTCAGTCTGTTGCTaGTTGGAACAGGGAAGCTCC +
Preference number: 4 (lower is better)
Translates to: KLVFDTALLPRRKDNGICFSVCC*LEQGSS
Trigger: GGAGCTTCCCTGTTCCAAGCAGCAACAGACTGAGAA...GCATATGCCATTGTCCTTCCTCCTGGGAAGGAGTGCGGTGTCAAATACCAATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR GCA 90 bp ATTACACGAACCACCATTGAGGCAGACAGGGTCGCACAAAGCTGTACTACAGGTGGCCACACCTGCTTCTaGCCAACTAAGATCATCTTT +
Preference number: 4 (lower is better)
Translates to: ITRTTIEADRVAQSCTTGGHTCF*PTKIIF
Trigger: AAAGATGATCTTAGTTGGGCAGAAGCAGGTGTGGCC...ACCTGTAGTACAGCTTTGTGCGACCCTGTCTGCCTCAATGGTGGTTCGTGTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR GCA 90 bp CATTTTCCATGGTTTTTGCAATCAGGGTCACAAAGAGCAGTTTGGCAGTTAGAACACACCCCCATTCCATaGACTGCCCATTGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: HFPWFLQSGSQRAVWQLEHTPIP*TAHCRC
Trigger: GCAGCGGCAATGGGCAGTGCATGGAATGGGGGTGTG...TTCTAACTGCCAAACTGCTCTTTGTGACCCTGATTGCAAAAACCATGGAAAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR GCA 90 bp ACATTTCTGCAAGCAGATAGGTGTGTTGCATCGTTTCCCACTCCAACCAGAAGGCCACATAAAAAGCCCTaGAGAGGAAACACTTGCCCC +
Preference number: 4 (lower is better)
Translates to: TFLQADRCVASFPTPTRRPHKKP*RGNTCP
Trigger: GGGGCAAGTGTTTCCTCTGCAGGGCTTTTTATGTGG...CCTTCTGGTTGGAGTGGGAAACGATGCAACACACCTATCTGCTTGCAGAAATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR GCA 90 bp GCAGATAGGTGTGTTGCATCGTTTCCCACTCCAACCAGAAGGACAAGAGCAAGTTTCTTCATCACAGGTTaGTCCACCATGTCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: ADRCVASFPTPTRRTRASFFITG*STMSWK
Trigger: CTTCCAGGACATGGTGGAGCAACCTGTGATGAAGAA...ACTTGCTCTTGTCCTTCTGGTTGGAGTGGGAAACGATGCAACACACCTATCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR GCA 90 bp CAGGAGGAAGGACAATGGCATATGCTGGGCGCAATGCATTCACCACCGTTTTTACATACCAGCCAGGTTTaGACTGGCAAATATCTGGTG +
Preference number: 4 (lower is better)
Translates to: QEEGQWHMLGAMHSPPFLHTSQV*TGKYLV
Trigger: CACCAGATATTTGCCAGTGCAAACCTGGCTGGTATG...TAAAAACGGTGGTGAATGCATTGCGCCCAGCATATGCCATTGTCCTTCCTCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CCA 90 bp AACACCTACAGAAAAGCCTGGACTCAATCAACTCCACCAGAACCTCTGGCCTTCAGAATGCCTGAACTGTaGTCTCTTGTGTCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: NTYRKAWTQSTPPEPLAFRMPEL*SLVSAP
Trigger: AGGAGCTGACACAAGAGACCACAGTTCAGGCATTCT...GAAGGCCAGAGGTTCTGGTGGAGTTGATTGAGTCCAGGCTTTTCTGTAGGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326715.4
CDS-3UTR CCA 90 bp CAGACAGGGTCGCACAAAGCTGTACTACAGGTGGGTCCATACCAGCCAGGTTTGATTCTTGGCTTTCGATaGCTACACTTTGTACATGAG +
Preference number: 4 (lower is better)
Translates to: QTGSHKAVLQVGPYQPGLILGFR*LHFVHE
Trigger: CTCATGTACAAAGTGTAGCCATCGAAAGCCAAGAAT...CAAACCTGGCTGGTATGGACCCACCTGTAGTACAGCTTTGTGCGACCCTGTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR CCA 90 bp GGACAGAGGCAAGTATTTGGCTTATTACACGAACCACCATTGAGGCAGACAGGGACTGCTGAACATCAGTaGGCAGCTGACAATCAACAG +
Preference number: 4 (lower is better)
Translates to: GQRQVFGLLHEPPLRQTGTAEHQ*AADNQQ
Trigger: CTGTTGATTGTCAGCTGCCCACTGATGTTCAGCAGT...CCCTGTCTGCCTCAATGGTGGTTCGTGTAATAAGCCAAATACTTGCCTCTGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR CCA 90 bp GCATCTGCCTCCATAAAGACATTTTGGGTTGCAAATTGGTATTTGACACCGCACCTGCCACTTCCCAGTTaGTTTCCCACCCACCAGATC +
Preference number: 4 (lower is better)
Translates to: ASASIKTFWVANWYLTPHLPLPS*FPTHQI
Trigger: GATCTGGTGGGTGGGAAACCAACTGGGAAGTGGCAG...GTGCGGTGTCAAATACCAATTTGCAACCCAAAATGTCTTTATGGAGGCAGATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CCA 90 bp TGGTATTTGACACCGCACTCCTTCCCAGGAGGAAGGACAATGGCATATGCTGGGTTATTTCTCATGCAGTaGCCACCATTCTTACAGGGA +
Preference number: 4 (lower is better)
Translates to: WYLTPHSFPGGRTMAYAGLFLMQ*PPFLQG
Trigger: TCCCTGTAAGAATGGTGGCCACTGCATGAGAAATAA...CCCAGCATATGCCATTGTCCTTCCTCCTGGGAAGGAGTGCGGTGTCAAATACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CCA 90 bp GCAGATAGGTGTGTTGCATCGTTTCCCACTCCAACCAGAAGGACAAGAGCAAGTACAAGAGCAAGTGCTTaGTCCCACACATTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: ADRCVASFPTPTRRTRASTRASA*SHTFSS
Trigger: GGAGGAAAATGTGTGGGACCAAGCACTTGCTCTTGT...ACTTGCTCTTGTCCTTCTGGTTGGAGTGGGAAACGATGCAACACACCTATCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CCA 90 bp AAATTGGTATTTGACACCGCACTCCTTCCCAGGAGGAAGGACAATGGCATATGCGACAATGGCATATGCTaGGCGCAATGCATTCACCAC +
Preference number: 4 (lower is better)
Translates to: KLVFDTALLPRRKDNGICDNGIC*AQCIHH
Trigger: GTGGTGAATGCATTGCGCCCAGCATATGCCATTGTC...GCATATGCCATTGTCCTTCCTCCTGGGAAGGAGTGCGGTGTCAAATACCAATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
3UTR CAA 72 bp CAGAGGCAAGTATTTGGCTTATTACACGAACCACCATaGAGGCAGACAGGGTCGCACAAAGCTGTACTACAG +
Preference number: 4 (lower is better)
Translates to: QRQVFGLLHEPP*RQTGSHKAVLQ
Trigger: CTGTAGTACAGCTTTGTGCGACCCTGTCTGCCTCAATGGTGGTTCGTGTAATAAGCCAAATACTTGCCTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR TCA 90 bp ATTACACGAACCACCATTGAGGCAGACAGGGTCGCACAAAGCTGTACTACAGGTCAGGTCTGTCAAGGATaGGAAATCTATACCATCCAG +
Preference number: 4 (lower is better)
Translates to: ITRTTIEADRVAQSCTTGQVCQG*EIYTIQ
Trigger: CTGGATGGTATAGATTTCTCATCCTTGACAGACCTG...ACCTGTAGTACAGCTTTGTGCGACCCTGTCTGCCTCAATGGTGGTTCGTGTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR TCA 90 bp TTCGATGGCTACACTTTGTACATGAGGATTCTCCAAGAAAAAGACAGAAGCGCTAGCCAGATGGGGGCCTaGGTTCCACAATGGTTCATC +
Preference number: 4 (lower is better)
Translates to: FDGYTLYMRILQEKDRSASQMGA*VPQWFI
Trigger: GATGAACCATTGTGGAACTCAGGCCCCCATCTGGCT...AGCGCTTCTGTCTTTTTCTTGGAGAATCCTCATGTACAAAGTGTAGCCATCGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000326715.4
CDS-3UTR TCA 90 bp GGACAATGGCATATGCTGGGCGCAATGCATTCACCACCGTTTTTACATTTCTGCAGATGGCAGTGTTTCTaGATCTCTCAGAGACAGCCA +
Preference number: 4 (lower is better)
Translates to: GQWHMLGAMHSPPFLHFCRWQCF*ISQRQP
Trigger: TGGCTGTCTCTGAGAGATTCAGAAACACTGCCATCT...GCAGAAATGTAAAAACGGTGGTGAATGCATTGCGCCCAGCATATGCCATTGTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR TCA 90 bp TCTCATGCAGTGGCCACCATTCTTACAGGGAGGGTGACAGAAAGCATTCTGACAAAAAGAGAGAATGCCTaGACTGTGGTCTCTTGTGTC +
Preference number: 4 (lower is better)
Translates to: SHAVATILTGRVTESILTKRENA*TVVSCV
Trigger: GACACAAGAGACCACAGTTCAGGCATTCTCTCTTTT...TGTCAGAATGCTTTCTGTCACCCTCCCTGTAAGAATGGTGGCCACTGCATGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR TCA 90 bp TGGTATTTGACACCGCACTCCTTCCCAGGAGGAAGGACAATGGCATATGCTGGGGCTACACTTTGTACATaGGGATTCTCCAAGAAAAAG +
Preference number: 4 (lower is better)
Translates to: WYLTPHSFPGGRTMAYAGATLCT*GFSKKK
Trigger: CTTTTTCTTGGAGAATCCTCATGTACAAAGTGTAGC...CCCAGCATATGCCATTGTCCTTCCTCCTGGGAAGGAGTGCGGTGTCAAATACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR TCA 90 bp ACACATTATTTCTCATGCAGTGGCCACCATTCTTACAGGGAGGGTGACAGAAAGGGATGGCTTTCCAGGTaGTGTCATAGAAACTGGCAG +
Preference number: 4 (lower is better)
Translates to: THYFSCSGHHSYREGDRKGWLSR*CHRNWQ
Trigger: CTGCCAGTTTCTATGACATCACCTGGAAAGCCATCC...CTTTCTGTCACCCTCCCTGTAAGAATGGTGGCCACTGCATGAGAAATAATGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR TCA 90 bp CTTCTCACATTTGACTCCAGAGTATTCAGTGCGGCAGGAACACACATTGGGAAAGGATGGCTTTCCAGGTaGTGTCATAGAAACTGGCAG +
Preference number: 4 (lower is better)
Translates to: LLTFDSRVFSAAGTHIGKGWLSR*CHRNWQ
Trigger: CTGCCAGTTTCTATGACATCACCTGGAAAGCCATCC...TTTCCCAATGTGTGTTCCTGCCGCACTGAATACTCTGGAGTCAAATGTGAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR TCA 90 bp ACATTTCTGCAAGCAGATAGGTGTGTTGCATCGTTTCCCACTCCAACCAGAAGGACCCAAGGCAATTTCTaGTCGAGAAACACTGTCCAG +
Preference number: 4 (lower is better)
Translates to: TFLQADRCVASFPTPTRRTQGNF*SRNTVQ
Trigger: CTGGACAGTGTTTCTCGATCAGAAATTGCCTTGGGT...CCTTCTGGTTGGAGTGGGAAACGATGCAACACACCTATCTGCTTGCAGAAATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR TCA 90 bp CAGGAGGAAGGACAATGGCATATGCTGGGCGCAATGCATTCACCACCGTTTTTAGAAGATAAGCTGACATaGTTGAGGTCTTTGCAACCC +
Preference number: 4 (lower is better)
Translates to: QEEGQWHMLGAMHSPPFLEDKLT*LRSLQP
Trigger: GGGTTGCAAAGACCTCAATCATGTCAGCTTATCTTC...TAAAAACGGTGGTGAATGCATTGCGCCCAGCATATGCCATTGTCCTTCCTCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR TCA 90 bp CATTTGACTCCAGAGTATTCAGTGCGGCAGGAACACACATTGGGAAATATGCATCCAGATCCGTTTGGCTaGGACTCGGGAAAGCAAACA +
Preference number: 4 (lower is better)
Translates to: HLTPEYSVRQEHTLGNMHPDPFG*DSGKQT
Trigger: TGTTTGCTTTCCCGAGTCTCAGCCAAACGGATCTGG...ATGCATATTTCCCAATGTGTGTTCCTGCCGCACTGAATACTCTGGAGTCAAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR TCA 90 bp ATTATTTCTCATGCAGTGGCCACCATTCTTACAGGGAGGGTGACAGAAAGCATTTTGGCTAGAGTCTCCTaGCAGAGGGTCAAGGTGCTA +
Preference number: 4 (lower is better)
Translates to: IISHAVATILTGRVTESILARVS*QRVKVL
Trigger: TAGCACCTTGACCCTCTGTCAGGAGACTCTAGCCAA...AATGCTTTCTGTCACCCTCCCTGTAAGAATGGTGGCCACTGCATGAGAAATAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR TCA 90 bp TTCATCAAAGGTTCCACAAAGTCCCAGAGTGTTTCTGTAATCTACACTAGGGGCTTGGCTAGAGTCTCCTaGCAGAGGGTCAAGGTGCTA +
Preference number: 4 (lower is better)
Translates to: FIKGSTKSQSVSVIYTRGLARVS*QRVKVL
Trigger: TAGCACCTTGACCCTCTGTCAGGAGACTCTAGCCAA...GCCCCTAGTGTAGATTACAGAAACACTCTGGGACTTTGTGGAACCTTTGATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521169.5
CDS-3UTR TCA 90 bp CAGGGTCGCACAAAGCTGTACTACAGGTGGGTCCATACCAGCCAGGTTTGCACTAAGCACCATCATATATaGCCGTTATTTTGGGATTAC +
Preference number: 4 (lower is better)
Translates to: QGRTKLYYRWVHTSQVCTKHHHI*PLFWDY
Trigger: GTAATCCCAAAATAACGGTCATATATGATGGTGCTT...AGTGCAAACCTGGCTGGTATGGACCCACCTGTAGTACAGCTTTGTGCGACCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR TCA 90 bp AGACAGGGTCGCACAAAGCTGTACTACAGGTGGGTCCATACCAGCCAGGTTTGCAAGCACCATCATATATaGCCGTTATTTTGGGATTAC +
Preference number: 4 (lower is better)
Translates to: RQGRTKLYYRWVHTSQVCKHHHI*PLFWDY
Trigger: GTAATCCCAAAATAACGGTCATATATGATGGTGCTT...GCAAACCTGGCTGGTATGGACCCACCTGTAGTACAGCTTTGTGCGACCCTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR TCA 90 bp AGGAAGGACAATGGCATATGCTGGGCGCAATGCATTCACCACCGTTTTTACATTTTGTCTTGCAATGCTTaGATCACTGGGGGCTGGTTG +
Preference number: 4 (lower is better)
Translates to: RKDNGICWAQCIHHRFYILSCNA*ITGGWL
Trigger: CAACCAGCCCCCAGTGATTCAAGCATTGCAAGACAA...AATGTAAAAACGGTGGTGAATGCATTGCGCCCAGCATATGCCATTGTCCTTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR TCA 90 bp AAATTGGTATTTGACACCGCACTCCTTCCCAGGAGGAAGGACAATGGCATATGCTTGCAAATTGGTATTTaGCACCGCACTCCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: KLVFDTALLPRRKDNGICLQIGI*HRTPSQ
Trigger: CTGGGAAGGAGTGCGGTGTCAAATACCAATTTGCAA...GCATATGCCATTGTCCTTCCTCCTGGGAAGGAGTGCGGTGTCAAATACCAATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR GCA 90 bp ATGGCATATGCTGGGCGCAATGCATTCACCACCGTTTTTACATTTCTGCAAGCATTCTCAGTCTGTTGCTaGTTGGAACAGGGAAGCTCC +
Preference number: 4 (lower is better)
Translates to: MAYAGRNAFTTVFTFLQAFSVCC*LEQGSS
Trigger: GGAGCTTCCCTGTTCCAAGCAGCAACAGACTGAGAA...TGCTTGCAGAAATGTAAAAACGGTGGTGAATGCATTGCGCCCAGCATATGCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR GCA 90 bp GCAGATAGGTGTGTTGCATCGTTTCCCACTCCAACCAGAAGGACAAGAGCAAGTGTGCTGAACAAAAACTaGCATGTTGCACAAGCTGTC +
Preference number: 4 (lower is better)
Translates to: ADRCVASFPTPTRRTRASVLNKN*HVAQAV
Trigger: GACAGCTTGTGCAACATGGCAGTTTTTGTTCAGCAC...ACTTGCTCTTGTCCTTCTGGTTGGAGTGGGAAACGATGCAACACACCTATCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR GCA 90 bp GTATTTGACACCGCACTCCTTCCCAGGAGGAAGGACAATGGCATATGCTGGGCGTCTTCTGGAGATGTATaGTTGTTTATCTCTCTGACA +
Preference number: 4 (lower is better)
Translates to: VFDTALLPRRKDNGICWASSGDV*LFISLT
Trigger: TGTCAGAGAGATAAACAAGCATACATCTCCAGAAGA...CGCCCAGCATATGCCATTGTCCTTCCTCCTGGGAAGGAGTGCGGTGTCAAATAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR GCA 90 bp AATTGGTATTTGACACCGCACTCCTTCCCAGGAGGAAGGACAATGGCATATGCTGAGGGGAAAAACTCTTaGTGTACATCCTCAGCATGG +
Preference number: 4 (lower is better)
Translates to: NWYLTPHSFPGGRTMAYAEGKNS*CTSSAW
Trigger: CCATGCTGAGGATGTACAGCAAGAGTTTTTCCCCTC...AGCATATGCCATTGTCCTTCCTCCTGGGAAGGAGTGCGGTGTCAAATACCAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR GCA 90 bp ACACATTATTTCTCATGCAGTGGCCACCATTCTTACAGGGAGGGTGACAGAAAGGACACAGCCTTCCTATaGTGGAGTTGGCTAGAGTCT +
Preference number: 4 (lower is better)
Translates to: THYFSCSGHHSYREGDRKDTAFL*WSWLES
Trigger: AGACTCTAGCCAACTCCAGCATAGGAAGGCTGTGTC...CTTTCTGTCACCCTCCCTGTAAGAATGGTGGCCACTGCATGAGAAATAATGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR GCA 90 bp GACAATGGCATATGCTGGGCGCAATGCATTCACCACCGTTTTTACATTTCTGCAGACACAGCCTTCCTATaGTGGAGTTGGCTAGAGTCT +
Preference number: 4 (lower is better)
Translates to: DNGICWAQCIHHRFYISADTAFL*WSWLES
Trigger: AGACTCTAGCCAACTCCAGCATAGGAAGGCTGTGTC...TGCAGAAATGTAAAAACGGTGGTGAATGCATTGCGCCCAGCATATGCCATTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR GCA 90 bp ACATTTCTGCAAGCAGATAGGTGTGTTGCATCGTTTCCCACTCCAACCAGAAGGGGCCACACCTGCTTCTaGCCAACTAAGATCATCTTT +
Preference number: 4 (lower is better)
Translates to: TFLQADRCVASFPTPTRRGHTCF*PTKIIF
Trigger: AAAGATGATCTTAGTTGGGCAGAAGCAGGTGTGGCC...CCTTCTGGTTGGAGTGGGAAACGATGCAACACACCTATCTGCTTGCAGAAATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR GCA 90 bp CATTTGACTCCAGAGTATTCAGTGCGGCAGGAACACACATTGGGAAATATGCATCCCCATTCCATGCACTaGCCATTGCCGCTGCATAAA +
Preference number: 4 (lower is better)
Translates to: HLTPEYSVRQEHTLGNMHPHSMH*PLPLHK
Trigger: TTTATGCAGCGGCAATGGGCAGTGCATGGAATGGGG...ATGCATATTTCCCAATGTGTGTTCCTGCCGCACTGAATACTCTGGAGTCAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR GCA 90 bp CAATGGCGTCTTATCTGTATTTTCTTCTCACATTTGACTCCAGAGTATTCAGTGCACACCCCCATTCCATaGACTGCCCATTGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: QWRLICIFFSHLTPEYSVHTPIP*TAHCRC
Trigger: GCAGCGGCAATGGGCAGTGCATGGAATGGGGGTGTG...CACTGAATACTCTGGAGTCAAATGTGAGAAGAAAATACAGATAAGACGCCATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR GCA 90 bp AGAAAGCATTCTGACAGTGTTCCCCAAAGAATCCATTTGGACAGAGGCAAGTATCCACTTCACAAAGGCTaGCATGGAAGCCAGGCAAGC +
Preference number: 4 (lower is better)
Translates to: RKHSDSVPQRIHLDRGKYPLHKG*HGSQAS
Trigger: GCTTGCCTGGCTTCCATGGCAGCCTTTGTGAAGTGG...ATACTTGCCTCTGTCCAAATGGATTCTTTGGGGAACACTGTCAGAATGCTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR GCA 90 bp AAATTGGTATTTGACACCGCACTCCTTCCCAGGAGGAAGGACAATGGCATATGCCTTGTTGGCTTAACATaGCTCTTTCTCCCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: KLVFDTALLPRRKDNGICLVGLT*LFLPWA
Trigger: TGCCCAAGGGAGAAAGAGGCATGTTAAGCCAACAAG...GCATATGCCATTGTCCTTCCTCCTGGGAAGGAGTGCGGTGTCAAATACCAATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR GCA 90 bp TATTTGACACCGCACTCCTTCCCAGGAGGAAGGACAATGGCATATGCTGGGCGCATTTTCCATGGTTTTTaGAATCAGGGTCACAAAGAG +
Preference number: 4 (lower is better)
Translates to: YLTPHSFPGGRTMAYAGRIFHGF*NQGHKE
Trigger: CTCTTTGTGACCCTGATTGCAAAAACCATGGAAAAT...GCGCCCAGCATATGCCATTGTCCTTCCTCCTGGGAAGGAGTGCGGTGTCAAATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR GCA 90 bp TTCTTCCAGATCCGTTTGGCTGAGACTCGGGAAAGCAAACAAAGGAGGAAACTCTTCTTCATCACAGGTTaGTCCACCATGTCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: FFQIRLAETRESKQRRKLFFITG*STMSWK
Trigger: CTTCCAGGACATGGTGGAGCAACCTGTGATGAAGAA...GAGTTTCCTCCTTTGTTTGCTTTCCCGAGTCTCAGCCAAACGGATCTGGAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521169.5
CDS-3UTR GCA 90 bp CGCACACATTATTTCTCATGCAGTGGCCACCATTCTTACAGGGAGGGTGACAGAATATGCTGGGCGCAATaGATTCACCACCGTTTTTAC +
Preference number: 4 (lower is better)
Translates to: RTHYFSCSGHHSYREGDRICWAQ*IHHRFY
Trigger: GTAAAAACGGTGGTGAATGCATTGCGCCCAGCATAT...TCTGTCACCCTCCCTGTAAGAATGGTGGCCACTGCATGAGAAATAATGTGTGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR GCA 90 bp CACATTATTTCTCATGCAGTGGCCACCATTCTTACAGGGAGGGTGACAGAAAGCAAGGACAATGGCATATaGTGGGCGCAATGCATTCAC +
Preference number: 4 (lower is better)
Translates to: HIISHAVATILTGRVTESKDNGI*WAQCIH
Trigger: GTGAATGCATTGCGCCCAGCATATGCCATTGTCCTT...GCTTTCTGTCACCCTCCCTGTAAGAATGGTGGCCACTGCATGAGAAATAATGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR GCA 90 bp GGACAATGGCATATGCTGGGCGCAATGCATTCACCACCGTTTTTACATTTCTGCAAGGACAATGGCATATaGTGGGCGCAATGCATTCAC +
Preference number: 4 (lower is better)
Translates to: GQWHMLGAMHSPPFLHFCKDNGI*WAQCIH
Trigger: GTGAATGCATTGCGCCCAGCATATGCCATTGTCCTT...GCAGAAATGTAAAAACGGTGGTGAATGCATTGCGCCCAGCATATGCCATTGTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR GCA 90 bp ACACATTATTTCTCATGCAGTGGCCACCATTCTTACAGGGAGGGTGACAGAAAGCTCCAGAGTATTCAGTaGGGCAGGAACACACATTGG +
Preference number: 4 (lower is better)
Translates to: THYFSCSGHHSYREGDRKLQSIQ*GRNTHW
Trigger: CCAATGTGTGTTCCTGCCGCACTGAATACTCTGGAG...CTTTCTGTCACCCTCCCTGTAAGAATGGTGGCCACTGCATGAGAAATAATGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR GCA 90 bp AGGAAGGACAATGGCATATGCTGGGCGCAATGCATTCACCACCGTTTTTACATTCTCCAGAGTATTCAGTaGGGCAGGAACACACATTGG +
Preference number: 4 (lower is better)
Translates to: RKDNGICWAQCIHHRFYILQSIQ*GRNTHW
Trigger: CCAATGTGTGTTCCTGCCGCACTGAATACTCTGGAG...AATGTAAAAACGGTGGTGAATGCATTGCGCCCAGCATATGCCATTGTCCTTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR GCA 90 bp ATGGCATATGCTGGGCGCAATGCATTCACCACCGTTTTTACATTTCTGCAAGCACTCCAGAGTATTCAGTaGGGCAGGAACACACATTGG +
Preference number: 4 (lower is better)
Translates to: MAYAGRNAFTTVFTFLQALQSIQ*GRNTHW
Trigger: CCAATGTGTGTTCCTGCCGCACTGAATACTCTGGAG...TGCTTGCAGAAATGTAAAAACGGTGGTGAATGCATTGCGCCCAGCATATGCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR GCA 90 bp AAGCCTGGACTCAATCAACTCCACCAGAACCTCTGGCCTTCCTGCAGGTGGAGGAGAAGAAATGTGAATTaGTTTGGCAATCGTCAGTTT +
Preference number: 4 (lower is better)
Translates to: KPGLNQLHQNLWPSCRWRRRNVN*FGNRQF
Trigger: AAACTGACGATTGCCAAAGCAATTCACATTTCTTCT...CCTCCACCTGCAGGAAGGCCAGAGGTTCTGGTGGAGTTGATTGAGTCCAGGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326715.4
CDS-3UTR CCA 90 bp TTCTTCCAGATCCGTTTGGCTGAGACTCGGGAAAGCAAACAAAGGAGGAAACTCTCGGGCCTCCTTTCTTaGATTTTCTCAGTCTGTTGC +
Preference number: 4 (lower is better)
Translates to: FFQIRLAETRESKQRRKLSGLLS*IFSVCC
Trigger: GCAACAGACTGAGAAAATCCAAGAAAGGAGGCCCGA...GAGTTTCCTCCTTTGTTTGCTTTCCCGAGTCTCAGCCAAACGGATCTGGAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521169.5
CDS-3UTR CCA 90 bp GAAGGACAATGGCATATGCTGGGCGCAATGCATTCACCACCGTTTTTACATTTCCTCAACACATTTGGTTaGCATCTCGGCAGGTCTGTC +
Preference number: 4 (lower is better)
Translates to: EGQWHMLGAMHSPPFLHFLNTFG*HLGRSV
Trigger: GACAGACCTGCCGAGATGCCAACCAAATGTGTTGAG...GAAATGTAAAAACGGTGGTGAATGCATTGCGCCCAGCATATGCCATTGTCCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CCA 90 bp TTACATTTCTGCAAGCAGATAGGTGTGTTGCATCGTTTCCCACTCCAACCAGAATCAGAGACAGCCAGATaGGGGCCTGAGTTCCACAAT +
Preference number: 4 (lower is better)
Translates to: LHFCKQIGVLHRFPLQPESETAR*GPEFHN
Trigger: ATTGTGGAACTCAGGCCCCCATCTGGCTGTCTCTGA...TTCTGGTTGGAGTGGGAAACGATGCAACACACCTATCTGCTTGCAGAAATGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CCA 90 bp TTGCTTTGGCAATCGTCAGTTTGGCCGAGTATTAGTAATATGATTGGGCTAAAACTCCACCAGAACCTCTaGCCTTCCTGCAGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: LLWQSSVWPSISNMIGLKLHQNL*PSCRWR
Trigger: CCTCCACCTGCAGGAAGGCCAGAGGTTCTGGTGGAG...TTTTAGCCCAATCATATTACTAATACTCGGCCAAACTGACGATTGCCAAAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326715.4
CDS-3UTR CCA 90 bp AACACCTACAGAAAAGCCTGGACTCAATCAACTCCACCAGAACCTCTGGCCTTCACCTACAGAAAAGCCTaGACTCAATCAACTCCACCA +
Preference number: 4 (lower is better)
Translates to: NTYRKAWTQSTPPEPLAFTYRKA*TQSTPP
Trigger: TGGTGGAGTTGATTGAGTCCAGGCTTTTCTGTAGGT...GAAGGCCAGAGGTTCTGGTGGAGTTGATTGAGTCCAGGCTTTTCTGTAGGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326715.4
CDS-3UTR CCA 90 bp AACCATAAGGACAAGTGCAGAGATTCCCAGCCAAGCATGTGCCACCATGTTGACACCTACAGAAAAGCCTaGACTCAATCAACTCCACCA +
Preference number: 4 (lower is better)
Translates to: NHKDKCRDSQPSMCHHVDTYRKA*TQSTPP
Trigger: TGGTGGAGTTGATTGAGTCCAGGCTTTTCTGTAGGT...GTCAACATGGTGGCACATGCTTGGCTGGGAATCTCTGCACTTGTCCTTATGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR CCA 90 bp GCAGATAGGTGTGTTGCATCGTTTCCCACTCCAACCAGAAGGACAAGAGCAAGTACCTACAGAAAAGCCTaGACTCAATCAACTCCACCA +
Preference number: 4 (lower is better)
Translates to: ADRCVASFPTPTRRTRASTYRKA*TQSTPP
Trigger: TGGTGGAGTTGATTGAGTCCAGGCTTTTCTGTAGGT...ACTTGCTCTTGTCCTTCTGGTTGGAGTGGGAAACGATGCAACACACCTATCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CCA 90 bp CTTCTCACATTTGACTCCAGAGTATTCAGTGCGGCAGGAACACACATTGGGAAATCTTCCAGATCCGTTTaGCTGAGACTCGGGAAAGCA +
Preference number: 4 (lower is better)
Translates to: LLTFDSRVFSAAGTHIGKSSRSV*LRLGKA
Trigger: TGCTTTCCCGAGTCTCAGCCAAACGGATCTGGAAGA...TTTCCCAATGTGTGTTCCTGCCGCACTGAATACTCTGGAGTCAAATGTGAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CCA 90 bp ACATTTCTGCAAGCAGATAGGTGTGTTGCATCGTTTCCCACTCCAACCAGAAGGTTCCTATGCTGGAGTTaGCTAGAGTCTCCTGACAGA +
Preference number: 4 (lower is better)
Translates to: TFLQADRCVASFPTPTRRFLCWS*LESPDR
Trigger: TCTGTCAGGAGACTCTAGCCAACTCCAGCATAGGAA...CCTTCTGGTTGGAGTGGGAAACGATGCAACACACCTATCTGCTTGCAGAAATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CCA 90 bp GCAGATAGGTGTGTTGCATCGTTTCCCACTCCAACCAGAAGGACAAGAGCAAGTCACCCACCAGATCCATaGTATCAAACTGCTGAACAT +
Preference number: 4 (lower is better)
Translates to: ADRCVASFPTPTRRTRASHPPDP*YQTAEH
Trigger: ATGTTCAGCAGTTTGATACCATGGATCTGGTGGGTG...ACTTGCTCTTGTCCTTCTGGTTGGAGTGGGAAACGATGCAACACACCTATCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CCA 90 bp TCTCATGCAGTGGCCACCATTCTTACAGGGAGGGTGACAGAAAGCATTCTGACACACCCACCAGATCCATaGTATCAAACTGCTGAACAT +
Preference number: 4 (lower is better)
Translates to: SHAVATILTGRVTESILTHPPDP*YQTAEH
Trigger: ATGTTCAGCAGTTTGATACCATGGATCTGGTGGGTG...TGTCAGAATGCTTTCTGTCACCCTCCCTGTAAGAATGGTGGCCACTGCATGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR CCA 90 bp TGGTATTTGACACCGCACTCCTTCCCAGGAGGAAGGACAATGGCATATGCTGGGCATTGTTTCACACCTTaGTCCTACAAAACCATAAGG +
Preference number: 4 (lower is better)
Translates to: WYLTPHSFPGGRTMAYAGHCFTP*SYKTIR
Trigger: CCTTATGGTTTTGTAGGACCAAGGTGTGAAACAATG...CCCAGCATATGCCATTGTCCTTCCTCCTGGGAAGGAGTGCGGTGTCAAATACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CCA 90 bp CTGTGTTTCAACTCTCTAGCTCCAACTCTTGTAGCAGCTCCCCTTTCTTCCTATGCACTGGCAAATATCTaGTGTAAGACACTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: LCFNSLAPTLVAAPLSSYALANI*CKTLAS
Trigger: GGAGGCCAGTGTCTTACACCAGATATTTGCCAGTGC...ATAGGAAGAAAGGGGAGCTGCTACAAGAGTTGGAGCTAGAGAGTTGAAACACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452576.6
CDS-3UTR CCA 90 bp GACAATGGCATATGCTGGGCGCAATGCATTCACCACCGTTTTTACATTTCTGCAAAGCTGTACTACAGGTaGGTCCATACCAGCCAGGTT +
Preference number: 4 (lower is better)
Translates to: DNGICWAQCIHHRFYISAKLYYR*VHTSQV
Trigger: AACCTGGCTGGTATGGACCCACCTGTAGTACAGCTT...TGCAGAAATGTAAAAACGGTGGTGAATGCATTGCGCCCAGCATATGCCATTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CCA 90 bp AAATTGGTATTTGACACCGCACTCCTTCCCAGGAGGAAGGACAATGGCATATGCACAAGAGCAAGTGCTTaGTCCCACACATTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: KLVFDTALLPRRKDNGICTRASA*SHTFSS
Trigger: GGAGGAAAATGTGTGGGACCAAGCACTTGCTCTTGT...GCATATGCCATTGTCCTTCCTCCTGGGAAGGAGTGCGGTGTCAAATACCAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR TCA 90 bp AATTGGTATTTGACACCGCACTCCTTCCCAGGAGGAAGGACAATGGCATATGCTCAGGTCTGTCAAGGATaGGAAATCTATACCATCCAG +
Preference number: 4 (lower is better)
Translates to: NWYLTPHSFPGGRTMAYAQVCQG*EIYTIQ
Trigger: CTGGATGGTATAGATTTCTCATCCTTGACAGACCTG...AGCATATGCCATTGTCCTTCCTCCTGGGAAGGAGTGCGGTGTCAAATACCAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR TCA 90 bp GCCTCCATAAAGACATTTTGGGTTGCAAATTGGTATTTGACACCGCACTCCTTCAAGCTGTCAATTGCTTaGTCTCCCCAGGAGATGGCA +
Preference number: 4 (lower is better)
Translates to: ASIKTFWVANWYLTPHSFKLSIA*SPQEMA
Trigger: TGCCATCTCCTGGGGAGATCAAGCAATTGACAGCTT...GAAGGAGTGCGGTGTCAAATACCAATTTGCAACCCAAAATGTCTTTATGGAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR TCA 90 bp AACACCTACAGAAAAGCCTGGACTCAATCAACTCCACCAGAACCTCTGGCCTTCTTCTTTCCCATCCTCTaGTATAGTGCTCAATTCAGG +
Preference number: 4 (lower is better)
Translates to: NTYRKAWTQSTPPEPLAFFFPIL*YSAQFR
Trigger: CCTGAATTGAGCACTATATCAGAGGATGGGAAAGAA...GAAGGCCAGAGGTTCTGGTGGAGTTGATTGAGTCCAGGCTTTTCTGTAGGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326715.4
CDS-3UTR TCA 90 bp GGACAGAGGCAAGTATTTGGCTTATTACACGAACCACCATTGAGGCAGACAGGGTTCTTTCCCATCCTCTaGTATAGTGCTCAATTCAGG +
Preference number: 4 (lower is better)
Translates to: GQRQVFGLLHEPPLRQTGFFPIL*YSAQFR
Trigger: CCTGAATTGAGCACTATATCAGAGGATGGGAAAGAA...CCCTGTCTGCCTCAATGGTGGTTCGTGTAATAAGCCAAATACTTGCCTCTGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR TCA 90 bp ATTACACGAACCACCATTGAGGCAGACAGGGTCGCACAAAGCTGTACTACAGGTTTGCACTACAATGTTTaGGACTCTATCTCCATCTCG +
Preference number: 4 (lower is better)
Translates to: ITRTTIEADRVAQSCTTGLHYNV*DSISIS
Trigger: CGAGATGGAGATAGAGTCTCAAACATTGTAGTGCAA...ACCTGTAGTACAGCTTTGTGCGACCCTGTCTGCCTCAATGGTGGTTCGTGTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452576.6
CDS-3UTR TCA 90 bp ATTATTTCTCATGCAGTGGCCACCATTCTTACAGGGAGGGTGACAGAAAGCATTCGCTGCAGTGTCCAATaGACAGCTACAATAGGATGG +
Preference number: 4 (lower is better)
Translates to: IISHAVATILTGRVTESIRCSVQ*TATIGW
Trigger: CCATCCTATTGTAGCTGTTCATTGGACACTGCAGCG...AATGCTTTCTGTCACCCTCCCTGTAAGAATGGTGGCCACTGCATGAGAAATAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR TCA 90 bp AAATTGGTATTTGACACCGCACTCCTTCCCAGGAGGAAGGACAATGGCATATGCTCGAAGGCCACGAACTaGTACTCAAAGTTTTCACCA +
Preference number: 4 (lower is better)
Translates to: KLVFDTALLPRRKDNGICSKATN*YSKFSP
Trigger: TGGTGAAAACTTTGAGTATCAGTTCGTGGCCTTCGA...GCATATGCCATTGTCCTTCCTCCTGGGAAGGAGTGCGGTGTCAAATACCAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR TCA 90 bp CTTCTCACATTTGACTCCAGAGTATTCAGTGCGGCAGGAACACACATTGGGAAACATGTGCCACCATGTTaGCAAGGTGGGTTACAATGT +
Preference number: 4 (lower is better)
Translates to: LLTFDSRVFSAAGTHIGKHVPPC*QGGLQC
Trigger: ACATTGTAACCCACCTTGTCAACATGGTGGCACATG...TTTCCCAATGTGTGTTCCTGCCGCACTGAATACTCTGGAGTCAAATGTGAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR TCA 90 bp CAGCCAAGAAGAAGAAATGTGAATTGCTTTGGCAATCGTCAGTTTGGCCGAGTAGTGAGATGTCTGTTTTaGTGCTTTCACGTGTGGGGG +
Preference number: 4 (lower is better)
Translates to: QPRRRNVNCFGNRQFGRVVRCLF*CFHVWG
Trigger: CCCCCACACGTGAAAGCATCAAAACAGACATCTCAC...TACTCGGCCAAACTGACGATTGCCAAAGCAATTCACATTTCTTCTTCTTGGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326715.4
CDS-3UTR GCA 90 bp AGGTGGGTTACAATGTTCTTCATCACAGGTTGCTCCACCATGTCCTGGAAGACAATTTTCTCAGTCTGTTaGTGCTTGGAACAGGGAAGC +
Preference number: 4 (lower is better)
Translates to: RWVTMFFITGCSTMSWKTIFSVC*CLEQGS
Trigger: GCTTCCCTGTTCCAAGCAGCAACAGACTGAGAAAAT...TGTCTTCCAGGACATGGTGGAGCAACCTGTGATGAAGAACATTGTAACCCACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR GCA 90 bp CTGTGTTTCAACTCTCTAGCTCCAACTCTTGTAGCAGCTCCCCTTTCTTCCTATGCACAAGCTGTCAATTaGTTGATCTCCCCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: LCFNSLAPTLVAAPLSSYAQAVN*LISPGD
Trigger: ATCTCCTGGGGAGATCAAGCAATTGACAGCTTGTGC...ATAGGAAGAAAGGGGAGCTGCTACAAGAGTTGGAGCTAGAGAGTTGAAACACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452576.6
CDS-3UTR GCA 90 bp ATGGCATATGCTGGGCGCAATGCATTCACCACCGTTTTTACATTTCTGCAAGCAGCACAAGCTGTCAATTaGTTGATCTCCCCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: MAYAGRNAFTTVFTFLQAAQAVN*LISPGD
Trigger: ATCTCCTGGGGAGATCAAGCAATTGACAGCTTGTGC...TGCTTGCAGAAATGTAAAAACGGTGGTGAATGCATTGCGCCCAGCATATGCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR GCA 90 bp GAGGAAGGACAATGGCATATGCTGGGCGCAATGCATTCACCACCGTTTTTACATGTGCTGAACAAAAACTaGCATGTTGCACAAGCTGTC +
Preference number: 4 (lower is better)
Translates to: EEGQWHMLGAMHSPPFLHVLNKN*HVAQAV
Trigger: GACAGCTTGTGCAACATGGCAGTTTTTGTTCAGCAC...ATGTAAAAACGGTGGTGAATGCATTGCGCCCAGCATATGCCATTGTCCTTCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR GCA 90 bp AAATTGGTATTTGACACCGCACTCCTTCCCAGGAGGAAGGACAATGGCATATGCACTGCCCATTGCCGCTaGATAAATTGGGGCATTTTA +
Preference number: 4 (lower is better)
Translates to: KLVFDTALLPRRKDNGICTAHCR*INWGIL
Trigger: TAAAATGCCCCAATTTATGCAGCGGCAATGGGCAGT...GCATATGCCATTGTCCTTCCTCCTGGGAAGGAGTGCGGTGTCAAATACCAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR GCA 90 bp CGCACACATTATTTCTCATGCAGTGGCCACCATTCTTACAGGGAGGGTGACAGAAACCAGGTTTACATTTaGAGATGTTTGGGGCAACAC +
Preference number: 4 (lower is better)
Translates to: RTHYFSCSGHHSYREGDRNQVYI*RCLGQH
Trigger: GTGTTGCCCCAAACATCTGCAAATGTAAACCTGGTT...TCTGTCACCCTCCCTGTAAGAATGGTGGCCACTGCATGAGAAATAATGTGTGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR GCA 90 bp AGGAAGGACAATGGCATATGCTGGGCGCAATGCATTCACCACCGTTTTTACATTCATACCAGCCAGGTTTaGACTGGCAAATATCTGGTG +
Preference number: 4 (lower is better)
Translates to: RKDNGICWAQCIHHRFYIHTSQV*TGKYLV
Trigger: CACCAGATATTTGCCAGTGCAAACCTGGCTGGTATG...AATGTAAAAACGGTGGTGAATGCATTGCGCCCAGCATATGCCATTGTCCTTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR GCA 90 bp ATTTCTCATGCAGTGGCCACCATTCTTACAGGGAGGGTGACAGAAAGCATTCTGAAGGACAAGAGCAAGTaGTTGGTCCCACACATTTTC +
Preference number: 4 (lower is better)
Translates to: ISHAVATILTGRVTESILKDKSK*LVPHIF
Trigger: GAAAATGTGTGGGACCAAGCACTTGCTCTTGTCCTT...CAGAATGCTTTCTGTCACCCTCCCTGTAAGAATGGTGGCCACTGCATGAGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR GCA 90 bp AGGTGGGTTACAATGTTCTTCATCACAGGTTGCTCCACCATGTCCTGGAAGACAAAAGGTATTCAGGCATaGTACTCCCTCAAAGCAAGG +
Preference number: 4 (lower is better)
Translates to: RWVTMFFITGCSTMSWKTKGIQA*YSLKAR
Trigger: CCTTGCTTTGAGGGAGTAGCATGCCTGAATACCTTT...TGTCTTCCAGGACATGGTGGAGCAACCTGTGATGAAGAACATTGTAACCCACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452576.6
CDS-3UTR GCA 90 bp ATCTCCTACCAGTGTATCCTTCACGACAGACGCACACATTATTTCTCATGCAGTCTGTCCCTTTGCTCCTaGTGTTGGTTTTGCCTGGAA +
Preference number: 4 (lower is better)
Translates to: ISYQCILHDRRTHYFSCSLSLCS*CWFCLE
Trigger: TTCCAGGCAAAACCAACAGCAGGAGCAAAGGGACAG...ACTGCATGAGAAATAATGTGTGCGTCTGTCGTGAAGGATACACTGGTAGGAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452576.6
CDS-3UTR GCA 90 bp ATTATTTCTCATGCAGTGGCCACCATTCTTACAGGGAGGGTGACAGAAAGCATTCTGCTTCTGTCCCTTTaGTCCTGCTGTTGGTTTTGC +
Preference number: 4 (lower is better)
Translates to: IISHAVATILTGRVTESILLLSL*SCCWFC
Trigger: GCAAAACCAACAGCAGGAGCAAAGGGACAGAAGCAG...AATGCTTTCTGTCACCCTCCCTGTAAGAATGGTGGCCACTGCATGAGAAATAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452576.6
CDS-3UTR GCA 90 bp ATCTCCTACCAGTGTATCCTTCACGACAGACGCACACATTATTTCTCATGCAGTTGCTGTGATGTTGCCTaGTTCTGTCCCTTTGCTCCT +
Preference number: 4 (lower is better)
Translates to: ISYQCILHDRRTHYFSCSCCDVA*FCPFAP
Trigger: AGGAGCAAAGGGACAGAAGCAGGCAACATCACAGCA...ACTGCATGAGAAATAATGTGTGCGTCTGTCGTGAAGGATACACTGGTAGGAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452576.6
CDS-3UTR CCA 90 bp ATGTCTTCAATTGATGTGCCATACTCTTCTGTGTTATATTTCCCCTCCTCCACACAGTCTGTTGCTGCTTaGAACAGGGAAGCTCCGCGT +
Preference number: 4 (lower is better)
Translates to: MSSIDVPYSSVLYFPSSTQSVAA*NREAPR
Trigger: ACGCGGAGCTTCCCTGTTCCAAGCAGCAACAGACTG...TGTGGAGGAGGGGAAATATAACACAGAAGAGTATGGCACATCAATTGAAGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521169.5
CDS-3UTR CCA 90 bp GCATCTGCCTCCATAAAGACATTTTGGGTTGCAAATTGGTATTTGACACCGCACCTCAACACATTTGGTTaGCATCTCGGCAGGTCTGTC +
Preference number: 4 (lower is better)
Translates to: ASASIKTFWVANWYLTPHLNTFG*HLGRSV
Trigger: GACAGACCTGCCGAGATGCCAACCAAATGTGTTGAG...GTGCGGTGTCAAATACCAATTTGCAACCCAAAATGTCTTTATGGAGGCAGATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CCA 90 bp GCCTCCATAAAGACATTTTGGGTTGCAAATTGGTATTTGACACCGCACTCCTTCCTCAACACATTTGGTTaGCATCTCGGCAGGTCTGTC +
Preference number: 4 (lower is better)
Translates to: ASIKTFWVANWYLTPHSFLNTFG*HLGRSV
Trigger: GACAGACCTGCCGAGATGCCAACCAAATGTGTTGAG...GAAGGAGTGCGGTGTCAAATACCAATTTGCAACCCAAAATGTCTTTATGGAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CCA 90 bp TCGATTGTACCTCATTTCTTGGCTGTGGCTTCCCCGGCCTTGTGTATATTTCTTTCATCTCAACACATTTaGTTGGCATCTCGGCAGGTC +
Preference number: 4 (lower is better)
Translates to: SIVPHFLAVASPALCIFLSSQHI*LASRQV
Trigger: GACCTGCCGAGATGCCAACCAAATGTGTTGAGATGA...AAGAAATATACACAAGGCCGGGGAAGCCACAGCCAAGAAATGAGGTACAATCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521169.5
CDS-3UTR CCA 90 bp TCAGATACACATGATCCACCATTCAAGCAATCACAAGACTTCACAGTCACCTCATCAGAGACAGCCAGATaGGGGCCTGAGTTCCACAAT +
Preference number: 4 (lower is better)
Translates to: SDTHDPPFKQSQDFTVTSSETAR*GPEFHN
Trigger: ATTGTGGAACTCAGGCCCCCATCTGGCTGTCTCTGA...TGAGGTGACTGTGAAGTCTTGTGATTGCTTGAATGGTGGATCATGTGTATCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521169.5
CDS-3UTR CCA 90 bp ACACATTATTTCTCATGCAGTGGCCACCATTCTTACAGGGAGGGTGACAGAAAGAGAATGCCTGAACTGTaGTCTCTTGTGTCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: THYFSCSGHHSYREGDRKRMPEL*SLVSAP
Trigger: AGGAGCTGACACAAGAGACCACAGTTCAGGCATTCT...CTTTCTGTCACCCTCCCTGTAAGAATGGTGGCCACTGCATGAGAAATAATGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR CCA 90 bp AGTGTATCCTTCACGACAGACGCACACATTATTTCTCATGCAGTGGCCACCATTTTCCTATGCTGGAGTTaGCTAGAGTCTCCTGACAGA +
Preference number: 4 (lower is better)
Translates to: SVSFTTDAHIISHAVATIFLCWS*LESPDR
Trigger: TCTGTCAGGAGACTCTAGCCAACTCCAGCATAGGAA...AATGGTGGCCACTGCATGAGAAATAATGTGTGCGTCTGTCGTGAAGGATACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR CCA 90 bp ATCTCCTACCAGTGTATCCTTCACGACAGACGCACACATTATTTCTCATGCAGTACAGCCTTCCTATGCTaGAGTTGGCTAGAGTCTCCT +
Preference number: 4 (lower is better)
Translates to: ISYQCILHDRRTHYFSCSTAFLC*SWLESP
Trigger: AGGAGACTCTAGCCAACTCCAGCATAGGAAGGCTGT...ACTGCATGAGAAATAATGTGTGCGTCTGTCGTGAAGGATACACTGGTAGGAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR CCA 90 bp GCATCTGCCTCCATAAAGACATTTTGGGTTGCAAATTGGTATTTGACACCGCACACAGCCTTCCTATGCTaGAGTTGGCTAGAGTCTCCT +
Preference number: 4 (lower is better)
Translates to: ASASIKTFWVANWYLTPHTAFLC*SWLESP
Trigger: AGGAGACTCTAGCCAACTCCAGCATAGGAAGGCTGT...GTGCGGTGTCAAATACCAATTTGCAACCCAAAATGTCTTTATGGAGGCAGATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CCA 90 bp ATCTCCTACCAGTGTATCCTTCACGACAGACGCACACATTATTTCTCATGCAGTATAGGAACTAAAGCTTaGGGAACACGCACACCCCCA +
Preference number: 4 (lower is better)
Translates to: ISYQCILHDRRTHYFSCSIGTKA*GTRTPP
Trigger: TGGGGGTGTGCGTGTTCCCCAAGCTTTAGTTCCTAT...ACTGCATGAGAAATAATGTGTGCGTCTGTCGTGAAGGATACACTGGTAGGAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR CCA 90 bp TTACATTTCTGCAAGCAGATAGGTGTGTTGCATCGTTTCCCACTCCAACCAGAAATAGGAACTAAAGCTTaGGGAACACGCACACCCCCA +
Preference number: 4 (lower is better)
Translates to: LHFCKQIGVLHRFPLQPEIGTKA*GTRTPP
Trigger: TGGGGGTGTGCGTGTTCCCCAAGCTTTAGTTCCTAT...TTCTGGTTGGAGTGGGAAACGATGCAACACACCTATCTGCTTGCAGAAATGTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CCA 90 bp TTCATCAAAGGTTCCACAAAGTCCCAGAGTGTTTCTGTAATCTACACTAGGGGCGATGTCAGAACCTTCTaGATCGAAGGCCACGAACTG +
Preference number: 4 (lower is better)
Translates to: FIKGSTKSQSVSVIYTRGDVRTF*IEGHEL
Trigger: CAGTTCGTGGCCTTCGATCCAGAAGGTTCTGACATC...GCCCCTAGTGTAGATTACAGAAACACTCTGGGACTTTGTGGAACCTTTGATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521169.5
CDS-3UTR CCA 90 bp GCATCTGCCTCCATAAAGACATTTTGGGTTGCAAATTGGTATTTGACACCGCACGATGTCAGAACCTTCTaGATCGAAGGCCACGAACTG +
Preference number: 4 (lower is better)
Translates to: ASASIKTFWVANWYLTPHDVRTF*IEGHEL
Trigger: CAGTTCGTGGCCTTCGATCCAGAAGGTTCTGACATC...GTGCGGTGTCAAATACCAATTTGCAACCCAAAATGTCTTTATGGAGGCAGATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CCA 90 bp ATGGTGAAGGCATTTCCACTTGTTGGCTTAACATGCCTCTTTCTCCCTTGGGCAGTACACTCCACTCCCTaGAGAAAAGTTCCTATCAGA +
Preference number: 4 (lower is better)
Translates to: MVKAFPLVGLTCLFLPWAVHSTP*RKVPIR
Trigger: TCTGATAGGAACTTTTCTCCAGGGAGTGGAGTGTAC...TGCCCAAGGGAGAAAGAGGCATGTTAAGCCAACAAGTGGAAATGCCTTCACCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR CCA 90 bp AGGTGGGTTACAATGTTCTTCATCACAGGTTGCTCCACCATGTCCTGGAAGACAACATTTGCAGATGTTTaGGGCAACACACTCCCTACT +
Preference number: 4 (lower is better)
Translates to: RWVTMFFITGCSTMSWKTTFADV*GNTLPT
Trigger: AGTAGGGAGTGTGTTGCCCCAAACATCTGCAAATGT...TGTCTTCCAGGACATGGTGGAGCAACCTGTGATGAAGAACATTGTAACCCACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR CCA 90 bp TTACATTTCTGCAAGCAGATAGGTGTGTTGCATCGTTTCCCACTCCAACCAGAAGCACTGGCAAATATCTaGTGTAAGACACTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: LHFCKQIGVLHRFPLQPEALANI*CKTLAS
Trigger: GGAGGCCAGTGTCTTACACCAGATATTTGCCAGTGC...TTCTGGTTGGAGTGGGAAACGATGCAACACACCTATCTGCTTGCAGAAATGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CCA 90 bp GGACAGAGGCAAGTATTTGGCTTATTACACGAACCACCATTGAGGCAGACAGGGACAGAGGCAAGTATTTaGCTTATTACACGAACCACC +
Preference number: 4 (lower is better)
Translates to: GQRQVFGLLHEPPLRQTGTEASI*LITRTT
Trigger: GGTGGTTCGTGTAATAAGCCAAATACTTGCCTCTGT...CCCTGTCTGCCTCAATGGTGGTTCGTGTAATAAGCCAAATACTTGCCTCTGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR CCA 90 bp GGACAGAGGCAAGTATTTGGCTTATTACACGAACCACCATTGAGGCAGACAGGGCCCAAAGAATCCATTTaGACAGAGGCAAGTATTTGG +
Preference number: 4 (lower is better)
Translates to: GQRQVFGLLHEPPLRQTGPKESI*TEASIW
Trigger: CCAAATACTTGCCTCTGTCCAAATGGATTCTTTGGG...CCCTGTCTGCCTCAATGGTGGTTCGTGTAATAAGCCAAATACTTGCCTCTGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR CCA 90 bp CATTTGACTCCAGAGTATTCAGTGCGGCAGGAACACACATTGGGAAATATGCATGACAATGGCATATGCTaGGCGCAATGCATTCACCAC +
Preference number: 4 (lower is better)
Translates to: HLTPEYSVRQEHTLGNMHDNGIC*AQCIHH
Trigger: GTGGTGAATGCATTGCGCCCAGCATATGCCATTGTC...ATGCATATTTCCCAATGTGTGTTCCTGCCGCACTGAATACTCTGGAGTCAAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CCA 90 bp TTACATTTCTGCAAGCAGATAGGTGTGTTGCATCGTTTCCCACTCCAACCAGAAGACAATGGCATATGCTaGGCGCAATGCATTCACCAC +
Preference number: 4 (lower is better)
Translates to: LHFCKQIGVLHRFPLQPEDNGIC*AQCIHH
Trigger: GTGGTGAATGCATTGCGCCCAGCATATGCCATTGTC...TTCTGGTTGGAGTGGGAAACGATGCAACACACCTATCTGCTTGCAGAAATGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CCA 90 bp TGCCTCCATAAAGACATTTTGGGTTGCAAATTGGTATTTGACACCGCACTCCTTCAGGAGGAAGGACAATaGCATATGCTGGGCGCAATG +
Preference number: 4 (lower is better)
Translates to: CLHKDILGCKLVFDTALLQEEGQ*HMLGAM
Trigger: CATTGCGCCCAGCATATGCCATTGTCCTTCCTCCTG...AAGGAGTGCGGTGTCAAATACCAATTTGCAACCCAAAATGTCTTTATGGAGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CCA 90 bp TGGCGTCTTATCTGTATTTTCTTCTCACATTTGACTCCAGAGTATTCAGTGCGGCAGGAGGAAGGACAATaGCATATGCTGGGCGCAATG +
Preference number: 4 (lower is better)
Translates to: WRLICIFFSHLTPEYSVRQEEGQ*HMLGAM
Trigger: CATTGCGCCCAGCATATGCCATTGTCCTTCCTCCTG...CCGCACTGAATACTCTGGAGTCAAATGTGAGAAGAAAATACAGATAAGACGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CCA 90 bp ATTTCTCATGCAGTGGCCACCATTCTTACAGGGAGGGTGACAGAAAGCATTCTGCCTCAAAGCAAGGCTTaGAGTCACACTCATCAACAT +
Preference number: 4 (lower is better)
Translates to: ISHAVATILTGRVTESILPQSKA*SHTHQH
Trigger: ATGTTGATGAGTGTGACTCCAAGCCTTGCTTTGAGG...CAGAATGCTTTCTGTCACCCTCCCTGTAAGAATGGTGGCCACTGCATGAGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452576.6
CDS-3UTR TCA 90 bp TGTGGTCTCTTGTGTCAGCTCCTCTTTGACTTCTTGAGAAGAAAGCCTAGACCACAGGTCTGTCAAGGATaGGAAATCTATACCATCCAG +
Preference number: 4 (lower is better)
Translates to: CGLLCQLLFDFLRRKPRPQVCQG*EIYTIQ
Trigger: CTGGATGGTATAGATTTCTCATCCTTGACAGACCTG...TGGTCTAGGCTTTCTTCTCAAGAAGTCAAAGAGGAGCTGACACAAGAGACCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326715.4
CDS-3UTR TCA 90 bp CAAGTTCTAAAAGAGAGAATGCCTGAACTGTGGTCTCTTGTGTCAGCTCCTCTTAGATGGCAGTGTTTCTaGATCTCTCAGAGACAGCCA +
Preference number: 4 (lower is better)
Translates to: QVLKERMPELWSLVSAPLRWQCF*ISQRQP
Trigger: TGGCTGTCTCTGAGAGATTCAGAAACACTGCCATCT...AAGAGGAGCTGACACAAGAGACCACAGTTCAGGCATTCTCTCTTTTAGAACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326715.4
CDS-3UTR TCA 90 bp ATTTCTCATGCAGTGGCCACCATTCTTACAGGGAGGGTGACAGAAAGCATTCTGTCCTCTTTGACTTCTTaGGAAGAAAGCCTAGACCAA +
Preference number: 4 (lower is better)
Translates to: ISHAVATILTGRVTESILSSLTS*EESLDQ
Trigger: TTGGTCTAGGCTTTCTTCTCAAGAAGTCAAAGAGGA...CAGAATGCTTTCTGTCACCCTCCCTGTAAGAATGGTGGCCACTGCATGAGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR TCA 90 bp TTACATTTCTGCAAGCAGATAGGTGTGTTGCATCGTTTCCCACTCCAACCAGAACTTCTGCAGTCCCACTaGCGTACATGGACTTCAAAA +
Preference number: 4 (lower is better)
Translates to: LHFCKQIGVLHRFPLQPELLQSH*RTWTSK
Trigger: TTTTGAAGTCCATGTACGTCAGTGGGACTGCAGAAG...TTCTGGTTGGAGTGGGAAACGATGCAACACACCTATCTGCTTGCAGAAATGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452576.6
CDS-3UTR TCA 90 bp AGAAAGCATTCTGACAGTGTTCCCCAAAGAATCCATTTGGACAGAGGCAAGTATCGCTGCAGTGTCCAATaGACAGCTACAATAGGATGG +
Preference number: 4 (lower is better)
Translates to: RKHSDSVPQRIHLDRGKYRCSVQ*TATIGW
Trigger: CCATCCTATTGTAGCTGTTCATTGGACACTGCAGCG...ATACTTGCCTCTGTCCAAATGGATTCTTTGGGGAACACTGTCAGAATGCTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR TCA 90 bp CTTCTCACATTTGACTCCAGAGTATTCAGTGCGGCAGGAACACACATTGGGAAAGAAGATAAGCTGACATaGTTGAGGTCTTTGCAACCC +
Preference number: 4 (lower is better)
Translates to: LLTFDSRVFSAAGTHIGKEDKLT*LRSLQP
Trigger: GGGTTGCAAAGACCTCAATCATGTCAGCTTATCTTC...TTTCCCAATGTGTGTTCCTGCCGCACTGAATACTCTGGAGTCAAATGTGAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR TCA 90 bp AGGTGGGTTACAATGTTCTTCATCACAGGTTGCTCCACCATGTCCTGGAAGACAAAAGGAGGAAACTCATaGAAGTTCTGCCGTTTCCAT +
Preference number: 4 (lower is better)
Translates to: RWVTMFFITGCSTMSWKTKGGNS*KFCRFH
Trigger: ATGGAAACGGCAGAACTTTCATGAGTTTCCTCCTTT...TGTCTTCCAGGACATGGTGGAGCAACCTGTGATGAAGAACATTGTAACCCACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR TCA 90 bp AAATTGGTATTTGACACCGCACTCCTTCCCAGGAGGAAGGACAATGGCATATGCAAAGGAGGAAACTCATaGAAGTTCTGCCGTTTCCAT +
Preference number: 4 (lower is better)
Translates to: KLVFDTALLPRRKDNGICKGGNS*KFCRFH
Trigger: ATGGAAACGGCAGAACTTTCATGAGTTTCCTCCTTT...GCATATGCCATTGTCCTTCCTCCTGGGAAGGAGTGCGGTGTCAAATACCAATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR TCA 90 bp ATTACACGAACCACCATTGAGGCAGACAGGGTCGCACAAAGCTGTACTACAGGTGAGAATGTCTTCAATTaGTGTGCCATACTCTTCTGT +
Preference number: 4 (lower is better)
Translates to: ITRTTIEADRVAQSCTTGENVFN*CAILFC
Trigger: ACAGAAGAGTATGGCACATCAATTGAAGACATTCTC...ACCTGTAGTACAGCTTTGTGCGACCCTGTCTGCCTCAATGGTGGTTCGTGTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR TCA 90 bp AGAAAGCATTCTGACAGTGTTCCCCAAAGAATCCATTTGGACAGAGGCAAGTATTTGTCTTGCAATGCTTaGATCACTGGGGGCTGGTTG +
Preference number: 4 (lower is better)
Translates to: RKHSDSVPQRIHLDRGKYLSCNA*ITGGWL
Trigger: CAACCAGCCCCCAGTGATTCAAGCATTGCAAGACAA...ATACTTGCCTCTGTCCAAATGGATTCTTTGGGGAACACTGTCAGAATGCTTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR TCA 90 bp CTTCTCACATTTGACTCCAGAGTATTCAGTGCGGCAGGAACACACATTGGGAAAACTGTGTTTCAACTTTaGGCTCAGGTGGACAATCAC +
Preference number: 4 (lower is better)
Translates to: LLTFDSRVFSAAGTHIGKTVFQL*AQVDNH
Trigger: GTGATTGTCCACCTGAGCTCAAAGTTGAAACACAGT...TTTCCCAATGTGTGTTCCTGCCGCACTGAATACTCTGGAGTCAAATGTGAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521169.5
ENST00000614403.4
CDS-3UTR TCA 90 bp TTTGACTCCAGAGTATTCAGTGCGGCAGGAACACACATTGGGAAATATGCATCTGGCAATTTTTGCCTTTaGGCTCAGGTGGACAATCAC +
Preference number: 4 (lower is better)
Translates to: FDSRVFSAAGTHIGKYASGNFCL*AQVDNH
Trigger: GTGATTGTCCACCTGAGCTCAAAGGCAAAAATTGCC...AGATGCATATTTCCCAATGTGTGTTCCTGCCGCACTGAATACTCTGGAGTCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452576.6
CDS-3UTR GCA 90 bp GCCTCCATAAAGACATTTTGGGTTGCAAATTGGTATTTGACACCGCACTCCTTCGCACAAGCTGTCAATTaGTTGATCTCCCCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: ASIKTFWVANWYLTPHSFAQAVN*LISPGD
Trigger: ATCTCCTGGGGAGATCAAGCAATTGACAGCTTGTGC...GAAGGAGTGCGGTGTCAAATACCAATTTGCAACCCAAAATGTCTTTATGGAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR GCA 90 bp AGGTGGGTTACAATGTTCTTCATCACAGGTTGCTCCACCATGTCCTGGAAGACAATCAGCACGGATAAATaGCCCAGAAGAAAACCAGAT +
Preference number: 4 (lower is better)
Translates to: RWVTMFFITGCSTMSWKTISTDK*PRRKPD
Trigger: ATCTGGTTTTCTTCTGGGGCATTTATCCGTGCTGAT...TGTCTTCCAGGACATGGTGGAGCAACCTGTGATGAAGAACATTGTAACCCACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR GCA 90 bp GAGGAAGGACAATGGCATATGCTGGGCGCAATGCATTCACCACCGTTTTTACATGCAGTGTGTCAGACATaGTTTTTCCTGGTAAAATCC +
Preference number: 4 (lower is better)
Translates to: EEGQWHMLGAMHSPPFLHAVCQT*FFLVKS
Trigger: GGATTTTACCAGGAAAAAGCATGTCTGACACACTGC...ATGTAAAAACGGTGGTGAATGCATTGCGCCCAGCATATGCCATTGTCCTTCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR GCA 90 bp GCATCTGCCTCCATAAAGACATTTTGGGTTGCAAATTGGTATTTGACACCGCACGAGGGGAAAAACTCTTaGTGTACATCCTCAGCATGG +
Preference number: 4 (lower is better)
Translates to: ASASIKTFWVANWYLTPHEGKNS*CTSSAW
Trigger: CCATGCTGAGGATGTACAGCAAGAGTTTTTCCCCTC...GTGCGGTGTCAAATACCAATTTGCAACCCAAAATGTCTTTATGGAGGCAGATGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR GCA 90 bp GAAGGACAATGGCATATGCTGGGCGCAATGCATTCACCACCGTTTTTACATTTCACTGCCCATTGCCGCTaGATAAATTGGGGCATTTTA +
Preference number: 4 (lower is better)
Translates to: EGQWHMLGAMHSPPFLHFTAHCR*INWGIL
Trigger: TAAAATGCCCCAATTTATGCAGCGGCAATGGGCAGT...GAAATGTAAAAACGGTGGTGAATGCATTGCGCCCAGCATATGCCATTGTCCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR GCA 90 bp ATTACACGAACCACCATTGAGGCAGACAGGGTCGCACAAAGCTGTACTACAGGTGACAATCAACAGCTCTaGTATTGTGGAAAACAGTCT +
Preference number: 4 (lower is better)
Translates to: ITRTTIEADRVAQSCTTGDNQQL*YCGKQS
Trigger: AGACTGTTTTCCACAATAGCAGAGCTGTTGATTGTC...ACCTGTAGTACAGCTTTGTGCGACCCTGTCTGCCTCAATGGTGGTTCGTGTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR GCA 90 bp GGACAATGGCATATGCTGGGCGCAATGCATTCACCACCGTTTTTACATTTCTGCTTAGATACCTTCAACTaGCACTTCCCAGTTGGTTTC +
Preference number: 4 (lower is better)
Translates to: GQWHMLGAMHSPPFLHFCLDTFN*HFPVGF
Trigger: GAAACCAACTGGGAAGTGGCAGTTGAAGGTATCTAA...GCAGAAATGTAAAAACGGTGGTGAATGCATTGCGCCCAGCATATGCCATTGTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR GCA 90 bp AAATTGGTATTTGACACCGCACTCCTTCCCAGGAGGAAGGACAATGGCATATGCTTAGATACCTTCAACTaGCACTTCCCAGTTGGTTTC +
Preference number: 4 (lower is better)
Translates to: KLVFDTALLPRRKDNGICLDTFN*HFPVGF
Trigger: GAAACCAACTGGGAAGTGGCAGTTGAAGGTATCTAA...GCATATGCCATTGTCCTTCCTCCTGGGAAGGAGTGCGGTGTCAAATACCAATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR GCA 90 bp CCAGGAGGAAGGACAATGGCATATGCTGGGCGCAATGCATTCACCACCGTTTTTATTTTCCATGGTTTTTaGAATCAGGGTCACAAAGAG +
Preference number: 4 (lower is better)
Translates to: PGGRTMAYAGRNAFTTVFIFHGF*NQGHKE
Trigger: CTCTTTGTGACCCTGATTGCAAAAACCATGGAAAAT...AAAAACGGTGGTGAATGCATTGCGCCCAGCATATGCCATTGTCCTTCCTCCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR GCA 90 bp ATAAGGACAAGTGCAGAGATTCCCAGCCAAGCATGTGCCACCATGTTGACAAGGCCTCCATTTTCACAGTaGCTGTTACAAACCATTGTT +
Preference number: 4 (lower is better)
Translates to: IRTSAEIPSQACATMLTRPPFSQ*LLQTIV
Trigger: AACAATGGTTTGTAACAGGCACTGTGAAAATGGAGG...CCTTGTCAACATGGTGGCACATGCTTGGCTGGGAATCTCTGCACTTGTCCTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR GCA 90 bp GACAATGGCATATGCTGGGCGCAATGCATTCACCACCGTTTTTACATTTCTGCAATATGCTGGGCGCAATaGATTCACCACCGTTTTTAC +
Preference number: 4 (lower is better)
Translates to: DNGICWAQCIHHRFYISAICWAQ*IHHRFY
Trigger: GTAAAAACGGTGGTGAATGCATTGCGCCCAGCATAT...TGCAGAAATGTAAAAACGGTGGTGAATGCATTGCGCCCAGCATATGCCATTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR GCA 90 bp TGGCAAATATCTGGTGTAAGACACTGGCCTCCATTTTCACAGTGCCTGTTACAAAAGGACAATGGCATATaGTGGGCGCAATGCATTCAC +
Preference number: 4 (lower is better)
Translates to: WQISGVRHWPPFSQCLLQKDNGI*WAQCIH
Trigger: GTGAATGCATTGCGCCCAGCATATGCCATTGTCCTT...TTGTAACAGGCACTGTGAAAATGGAGGCCAGTGTCTTACACCAGATATTTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR GCA 90 bp AACCATAAGGACAAGTGCAGAGATTCCCAGCCAAGCATGTGCCACCATGTTGACACACATTGGGAAATATaGATCTGCCTCCATAAAGAC +
Preference number: 4 (lower is better)
Translates to: NHKDKCRDSQPSMCHHVDTHWEI*ICLHKD
Trigger: GTCTTTATGGAGGCAGATGCATATTTCCCAATGTGT...GTCAACATGGTGGCACATGCTTGGCTGGGAATCTCTGCACTTGTCCTTATGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR CCA 90 bp CATATACTTGATGCTACTCAATGGCGTCTTATCTGTATTTTCTTCTCACATTTGCTCCACCAGAACCTCTaGCCTTCCTGCAGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: HILDATQWRLICIFFSHLLHQNL*PSCRWR
Trigger: CCTCCACCTGCAGGAAGGCCAGAGGTTCTGGTGGAG...CAAATGTGAGAAGAAAATACAGATAAGACGCCATTGAGTAGCATCAAGTATATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CCA 90 bp GCATCTGCCTCCATAAAGACATTTTGGGTTGCAAATTGGTATTTGACACCGCACAGAATGCCTGAACTGTaGTCTCTTGTGTCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: ASASIKTFWVANWYLTPHRMPEL*SLVSAP
Trigger: AGGAGCTGACACAAGAGACCACAGTTCAGGCATTCT...GTGCGGTGTCAAATACCAATTTGCAACCCAAAATGTCTTTATGGAGGCAGATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CCA 90 bp CTGTGTTTCAACTCTCTAGCTCCAACTCTTGTAGCAGCTCCCCTTTCTTCCTATGATCTGGATGCTGTCTaGAATGTAGTTGTTCCACAG +
Preference number: 4 (lower is better)
Translates to: LCFNSLAPTLVAAPLSSYDLDAV*NVVVPQ
Trigger: CTGTGGAACAACTACATTCCAGACAGCATCCAGATC...ATAGGAAGAAAGGGGAGCTGCTACAAGAGTTGGAGCTAGAGAGTTGAAACACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452576.6
CDS-3UTR CCA 90 bp AGGAAGGACAATGGCATATGCTGGGCGCAATGCATTCACCACCGTTTTTACATTCACCCACCAGATCCATaGTATCAAACTGCTGAACAT +
Preference number: 4 (lower is better)
Translates to: RKDNGICWAQCIHHRFYIHPPDP*YQTAEH
Trigger: ATGTTCAGCAGTTTGATACCATGGATCTGGTGGGTG...AATGTAAAAACGGTGGTGAATGCATTGCGCCCAGCATATGCCATTGTCCTTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CCA 90 bp AATTGGTATTTGACACCGCACTCCTTCCCAGGAGGAAGGACAATGGCATATGCTCAAACAAGGGCTGGTTaGATTTTTGTCTCCTTCAAC +
Preference number: 4 (lower is better)
Translates to: NWYLTPHSFPGGRTMAYAQTRAG*IFVSFN
Trigger: GTTGAAGGAGACAAAAATCCAACCAGCCCTTGTTTG...AGCATATGCCATTGTCCTTCCTCCTGGGAAGGAGTGCGGTGTCAAATACCAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CCA 90 bp ATAAGGACAAGTGCAGAGATTCCCAGCCAAGCATGTGCCACCATGTTGACAAGGACCATGTTGACAAGGTaGGTTACAATGTTCTTCATC +
Preference number: 4 (lower is better)
Translates to: IRTSAEIPSQACATMLTRTMLTR*VTMFFI
Trigger: GATGAAGAACATTGTAACCCACCTTGTCAACATGGT...CCTTGTCAACATGGTGGCACATGCTTGGCTGGGAATCTCTGCACTTGTCCTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR CCA 90 bp ATTACACGAACCACCATTGAGGCAGACAGGGTCGCACAAAGCTGTACTACAGGTACCATGTTGACAAGGTaGGTTACAATGTTCTTCATC +
Preference number: 4 (lower is better)
Translates to: ITRTTIEADRVAQSCTTGTMLTR*VTMFFI
Trigger: GATGAAGAACATTGTAACCCACCTTGTCAACATGGT...ACCTGTAGTACAGCTTTGTGCGACCCTGTCTGCCTCAATGGTGGTTCGTGTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR CCA 90 bp TGCCTCCATAAAGACATTTTGGGTTGCAAATTGGTATTTGACACCGCACTCCTTAAGCTGTACTACAGGTaGGTCCATACCAGCCAGGTT +
Preference number: 4 (lower is better)
Translates to: CLHKDILGCKLVFDTALLKLYYR*VHTSQV
Trigger: AACCTGGCTGGTATGGACCCACCTGTAGTACAGCTT...AAGGAGTGCGGTGTCAAATACCAATTTGCAACCCAAAATGTCTTTATGGAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CCA 90 bp GGACAATGGCATATGCTGGGCGCAATGCATTCACCACCGTTTTTACATTTCTGCTTATTTCTCATGCAGTaGCCACCATTCTTACAGGGA +
Preference number: 4 (lower is better)
Translates to: GQWHMLGAMHSPPFLHFCLFLMQ*PPFLQG
Trigger: TCCCTGTAAGAATGGTGGCCACTGCATGAGAAATAA...GCAGAAATGTAAAAACGGTGGTGAATGCATTGCGCCCAGCATATGCCATTGTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CCA 90 bp ATTATTTCTCATGCAGTGGCCACCATTCTTACAGGGAGGGTGACAGAAAGCATTACAAGAGCAAGTGCTTaGTCCCACACATTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: IISHAVATILTGRVTESITRASA*SHTFSS
Trigger: GGAGGAAAATGTGTGGGACCAAGCACTTGCTCTTGT...AATGCTTTCTGTCACCCTCCCTGTAAGAATGGTGGCCACTGCATGAGAAATAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR CCA 90 bp ACATTTCTGCAAGCAGATAGGTGTGTTGCATCGTTTCCCACTCCAACCAGAAGGTTTTGGGTTGCAAATTaGTATTTGACACCGCACTCC +
Preference number: 4 (lower is better)
Translates to: TFLQADRCVASFPTPTRRFWVAN*YLTPHS
Trigger: GGAGTGCGGTGTCAAATACCAATTTGCAACCCAAAA...CCTTCTGGTTGGAGTGGGAAACGATGCAACACACCTATCTGCTTGCAGAAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
3UTR CAA 72 bp CCGTTTCCATCTGTTTTGTCGATTGTACCTCATTTCTaGGCTGTGGCTTCCCCGGCCTTGTGTATATTTCTT +
Preference number: 4 (lower is better)
Translates to: PFPSVLSIVPHF*AVASPALCIFL
Trigger: AAGAAATATACACAAGGCCGGGGAAGCCACAGCCAAGAAATGAGGTACAATCGACAAAACAGATGGAAACGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521169.5
CDS-3UTR TCA 90 bp TGCTCCACCATGTCCTGGAAGACACTGACAAATGTTAGGCTTAATACATTTTCCAGATGGCAGTGTTTCTaGATCTCTCAGAGACAGCCA +
Preference number: 4 (lower is better)
Translates to: CSTMSWKTLTNVRLNTFSRWQCF*ISQRQP
Trigger: TGGCTGTCTCTGAGAGATTCAGAAACACTGCCATCT...GGAAAATGTATTAAGCCTAACATTTGTCAGTGTCTTCCAGGACATGGTGGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR TCA 90 bp GACAATGGCATATGCTGGGCGCAATGCATTCACCACCGTTTTTACATTTCTGCAACAGACACTGGGATTTaGAAGAGACAGCAGTCTTTT +
Preference number: 4 (lower is better)
Translates to: DNGICWAQCIHHRFYISATDTGI*KRQQSF
Trigger: AAAAGACTGCTGTCTCTTTCAAATCCCAGTGTCTGT...TGCAGAAATGTAAAAACGGTGGTGAATGCATTGCGCCCAGCATATGCCATTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR TCA 90 bp AGGAAGGACAATGGCATATGCTGGGCGCAATGCATTCACCACCGTTTTTACATTACAGACACTGGGATTTaGAAGAGACAGCAGTCTTTT +
Preference number: 4 (lower is better)
Translates to: RKDNGICWAQCIHHRFYITDTGI*KRQQSF
Trigger: AAAAGACTGCTGTCTCTTTCAAATCCCAGTGTCTGT...AATGTAAAAACGGTGGTGAATGCATTGCGCCCAGCATATGCCATTGTCCTTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR TCA 90 bp TTCTTCCAGATCCGTTTGGCTGAGACTCGGGAAAGCAAACAAAGGAGGAAACTCGCTACACTTTGTACATaGGGATTCTCCAAGAAAAAG +
Preference number: 4 (lower is better)
Translates to: FFQIRLAETRESKQRRKLATLCT*GFSKKK
Trigger: CTTTTTCTTGGAGAATCCTCATGTACAAAGTGTAGC...GAGTTTCCTCCTTTGTTTGCTTTCCCGAGTCTCAGCCAAACGGATCTGGAAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521169.5
CDS-3UTR TCA 90 bp CTGTGTTTCAACTCTCTAGCTCCAACTCTTGTAGCAGCTCCCCTTTCTTCCTATTTCTTTCCCATCCTCTaGTATAGTGCTCAATTCAGG +
Preference number: 4 (lower is better)
Translates to: LCFNSLAPTLVAAPLSSYFFPIL*YSAQFR
Trigger: CCTGAATTGAGCACTATATCAGAGGATGGGAAAGAA...ATAGGAAGAAAGGGGAGCTGCTACAAGAGTTGGAGCTAGAGAGTTGAAACACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452576.6
CDS-3UTR TCA 90 bp TGCCTCCATAAAGACATTTTGGGTTGCAAATTGGTATTTGACACCGCACTCCTTACCCAAGGCAATTTCTaGTCGAGAAACACTGTCCAG +
Preference number: 4 (lower is better)
Translates to: CLHKDILGCKLVFDTALLTQGNF*SRNTVQ
Trigger: CTGGACAGTGTTTCTCGATCAGAAATTGCCTTGGGT...AAGGAGTGCGGTGTCAAATACCAATTTGCAACCCAAAATGTCTTTATGGAGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR TCA 90 bp TCAGATACACATGATCCACCATTCAAGCAATCACAAGACTTCACAGTCACCTCAACCCAAGGCAATTTCTaGTCGAGAAACACTGTCCAG +
Preference number: 4 (lower is better)
Translates to: SDTHDPPFKQSQDFTVTSTQGNF*SRNTVQ
Trigger: CTGGACAGTGTTTCTCGATCAGAAATTGCCTTGGGT...TGAGGTGACTGTGAAGTCTTGTGATTGCTTGAATGGTGGATCATGTGTATCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521169.5
CDS-3UTR TCA 90 bp TTACATTTCTGCAAGCAGATAGGTGTGTTGCATCGTTTCCCACTCCAACCAGAAGAAGATAAGCTGACATaGTTGAGGTCTTTGCAACCC +
Preference number: 4 (lower is better)
Translates to: LHFCKQIGVLHRFPLQPEEDKLT*LRSLQP
Trigger: GGGTTGCAAAGACCTCAATCATGTCAGCTTATCTTC...TTCTGGTTGGAGTGGGAAACGATGCAACACACCTATCTGCTTGCAGAAATGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR TCA 90 bp TGGTCCTACAAAACCATAAGGACAAGTGCAGAGATTCCCAGCCAAGCATGTGCCTCTGACAAGAGTGTCTaGATTAATATATTCGGAGGT +
Preference number: 4 (lower is better)
Translates to: WSYKTIRTSAEIPSQACASDKSV*INIFGG
Trigger: ACCTCCGAATATATTAATTCAGACACTCTTGTCAGA...GGCACATGCTTGGCTGGGAATCTCTGCACTTGTCCTTATGGTTTTGTAGGACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR TCA 90 bp AACCATAAGGACAAGTGCAGAGATTCCCAGCCAAGCATGTGCCACCATGTTGACTTGAAGGTAATTCTTTaGAGCCTTTGCCAAAAACTC +
Preference number: 4 (lower is better)
Translates to: NHKDKCRDSQPSMCHHVDLKVIL*SLCQKL
Trigger: GAGTTTTTGGCAAAGGCTTCAAAGAATTACCTTCAA...GTCAACATGGTGGCACATGCTTGGCTGGGAATCTCTGCACTTGTCCTTATGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR TCA 90 bp ATTATTTCTCATGCAGTGGCCACCATTCTTACAGGGAGGGTGACAGAAAGCATTTCGAAGGCCACGAACTaGTACTCAAAGTTTTCACCA +
Preference number: 4 (lower is better)
Translates to: IISHAVATILTGRVTESISKATN*YSKFSP
Trigger: TGGTGAAAACTTTGAGTATCAGTTCGTGGCCTTCGA...AATGCTTTCTGTCACCCTCCCTGTAAGAATGGTGGCCACTGCATGAGAAATAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR TCA 90 bp TCTCATGCAGTGGCCACCATTCTTACAGGGAGGGTGACAGAAAGCATTCTGACAGATATTTACAAATGGTaGAGGCATTTCCACTTGTTG +
Preference number: 4 (lower is better)
Translates to: SHAVATILTGRVTESILTDIYKW*RHFHLL
Trigger: CAACAAGTGGAAATGCCTTCACCATTTGTAAATATC...TGTCAGAATGCTTTCTGTCACCCTCCCTGTAAGAATGGTGGCCACTGCATGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR GCA 90 bp TGTATGCTTTCAGCCAAGAAGAAGAAATGTGAATTGCTTTGGCAATCGTCAGTTGCTGACTGCTGGAGGTaGCATGAGTCAAAACGGACA +
Preference number: 4 (lower is better)
Translates to: CMLSAKKKKCELLWQSSVADCWR*HESKRT
Trigger: TGTCCGTTTTGACTCATGGCACCTCCAGCAGTCAGC...AACTGACGATTGCCAAAGCAATTCACATTTCTTCTTCTTGGCTGAAAGCATACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326715.4
CDS-3UTR GCA 90 bp GACAATGGCATATGCTGGGCGCAATGCATTCACCACCGTTTTTACATTTCTGCAAAAAGACAGAAGCGCTaGAGAATATCCTGTCTCCAA +
Preference number: 4 (lower is better)
Translates to: DNGICWAQCIHHRFYISAKRQKR*RISCLQ
Trigger: TTGGAGACAGGATATTCTGCAGCGCTTCTGTCTTTT...TGCAGAAATGTAAAAACGGTGGTGAATGCATTGCGCCCAGCATATGCCATTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR GCA 90 bp AGGAAGGACAATGGCATATGCTGGGCGCAATGCATTCACCACCGTTTTTACATTATCAGCACGGATAAATaGCCCAGAAGAAAACCAGAT +
Preference number: 4 (lower is better)
Translates to: RKDNGICWAQCIHHRFYIISTDK*PRRKPD
Trigger: ATCTGGTTTTCTTCTGGGGCATTTATCCGTGCTGAT...AATGTAAAAACGGTGGTGAATGCATTGCGCCCAGCATATGCCATTGTCCTTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR GCA 90 bp AGGAAGGACAATGGCATATGCTGGGCGCAATGCATTCACCACCGTTTTTACATTGCAGTGTGTCAGACATaGTTTTTCCTGGTAAAATCC +
Preference number: 4 (lower is better)
Translates to: RKDNGICWAQCIHHRFYIAVCQT*FFLVKS
Trigger: GGATTTTACCAGGAAAAAGCATGTCTGACACACTGC...AATGTAAAAACGGTGGTGAATGCATTGCGCCCAGCATATGCCATTGTCCTTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR GCA 90 bp TGGCAAATATCTGGTGTAAGACACTGGCCTCCATTTTCACAGTGCCTGTTACAAACTGCCCATTGCCGCTaGATAAATTGGGGCATTTTA +
Preference number: 4 (lower is better)
Translates to: WQISGVRHWPPFSQCLLQTAHCR*INWGIL
Trigger: TAAAATGCCCCAATTTATGCAGCGGCAATGGGCAGT...TTGTAACAGGCACTGTGAAAATGGAGGCCAGTGTCTTACACCAGATATTTGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR GCA 90 bp CAATGGCGTCTTATCTGTATTTTCTTCTCACATTTGACTCCAGAGTATTCAGTGCCCCATTCCATGCACTaGCCATTGCCGCTGCATAAA +
Preference number: 4 (lower is better)
Translates to: QWRLICIFFSHLTPEYSVPHSMH*PLPLHK
Trigger: TTTATGCAGCGGCAATGGGCAGTGCATGGAATGGGG...CACTGAATACTCTGGAGTCAAATGTGAGAAGAAAATACAGATAAGACGCCATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR GCA 90 bp CTTCTCACATTTGACTCCAGAGTATTCAGTGCGGCAGGAACACACATTGGGAAATTAGATACCTTCAACTaGCACTTCCCAGTTGGTTTC +
Preference number: 4 (lower is better)
Translates to: LLTFDSRVFSAAGTHIGKLDTFN*HFPVGF
Trigger: GAAACCAACTGGGAAGTGGCAGTTGAAGGTATCTAA...TTTCCCAATGTGTGTTCCTGCCGCACTGAATACTCTGGAGTCAAATGTGAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR GCA 90 bp CTTCTCACATTTGACTCCAGAGTATTCAGTGCGGCAGGAACACACATTGGGAAAAACCAGGTTTACATTTaGAGATGTTTGGGGCAACAC +
Preference number: 4 (lower is better)
Translates to: LLTFDSRVFSAAGTHIGKNQVYI*RCLGQH
Trigger: GTGTTGCCCCAAACATCTGCAAATGTAAACCTGGTT...TTTCCCAATGTGTGTTCCTGCCGCACTGAATACTCTGGAGTCAAATGTGAGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR GCA 90 bp GGACAGAGGCAAGTATTTGGCTTATTACACGAACCACCATTGAGGCAGACAGGGATTTTCCATGGTTTTTaGAATCAGGGTCACAAAGAG +
Preference number: 4 (lower is better)
Translates to: GQRQVFGLLHEPPLRQTGIFHGF*NQGHKE
Trigger: CTCTTTGTGACCCTGATTGCAAAAACCATGGAAAAT...CCCTGTCTGCCTCAATGGTGGTTCGTGTAATAAGCCAAATACTTGCCTCTGTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR GCA 90 bp AAATTGGTATTTGACACCGCACTCCTTCCCAGGAGGAAGGACAATGGCATATGCCCTCCATTTTCACAGTaGCTGTTACAAACCATTGTT +
Preference number: 4 (lower is better)
Translates to: KLVFDTALLPRRKDNGICPPFSQ*LLQTIV
Trigger: AACAATGGTTTGTAACAGGCACTGTGAAAATGGAGG...GCATATGCCATTGTCCTTCCTCCTGGGAAGGAGTGCGGTGTCAAATACCAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR GCA 90 bp ATCAACAGCTCTGCTATTGTGGAAAACAGTCTGTGTATAGATGGGTTCTCCAGGAAGGACAAGAGCAAGTaGTTGGTCCCACACATTTTC +
Preference number: 4 (lower is better)
Translates to: INSSAIVENSLCIDGFSRKDKSK*LVPHIF
Trigger: GAAAATGTGTGGGACCAAGCACTTGCTCTTGTCCTT...CCTGGAGAACCCATCTATACACAGACTGTTTTCCACAATAGCAGAGCTGTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521169.5
CDS-3UTR CCA 90 bp GCGTCTTATCTGTATTTTCTTCTCACATTTGACTCCAGAGTATTCAGTGCGGCATCATCTCAACACATTTaGTTGGCATCTCGGCAGGTC +
Preference number: 4 (lower is better)
Translates to: ASYLYFLLTFDSRVFSAASSQHI*LASRQV
Trigger: GACCTGCCGAGATGCCAACCAAATGTGTTGAGATGA...TGCCGCACTGAATACTCTGGAGTCAAATGTGAGAAGAAAATACAGATAAGACGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CCA 90 bp TGCCTCCATAAAGACATTTTGGGTTGCAAATTGGTATTTGACACCGCACTCCTTTCATCTCAACACATTTaGTTGGCATCTCGGCAGGTC +
Preference number: 4 (lower is better)
Translates to: CLHKDILGCKLVFDTALLSSQHI*LASRQV
Trigger: GACCTGCCGAGATGCCAACCAAATGTGTTGAGATGA...AAGGAGTGCGGTGTCAAATACCAATTTGCAACCCAAAATGTCTTTATGGAGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CCA 90 bp AAATTGGTATTTGACACCGCACTCCTTCCCAGGAGGAAGGACAATGGCATATGCATTCTTGGCTTTCGATaGCTACACTTTGTACATGAG +
Preference number: 4 (lower is better)
Translates to: KLVFDTALLPRRKDNGICILGFR*LHFVHE
Trigger: CTCATGTACAAAGTGTAGCCATCGAAAGCCAAGAAT...GCATATGCCATTGTCCTTCCTCCTGGGAAGGAGTGCGGTGTCAAATACCAATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CCA 90 bp CATTTGACTCCAGAGTATTCAGTGCGGCAGGAACACACATTGGGAAATATGCATCAGTCTGTGTATAGATaGGTTCTCCAGGCATCCATT +
Preference number: 4 (lower is better)
Translates to: HLTPEYSVRQEHTLGNMHQSVYR*VLQASI
Trigger: AATGGATGCCTGGAGAACCCATCTATACACAGACTG...ATGCATATTTCCCAATGTGTGTTCCTGCCGCACTGAATACTCTGGAGTCAAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CCA 90 bp TGGCGTCTTATCTGTATTTTCTTCTCACATTTGACTCCAGAGTATTCAGTGCGGACTGCTGAACATCAGTaGGCAGCTGACAATCAACAG +
Preference number: 4 (lower is better)
Translates to: WRLICIFFSHLTPEYSVRTAEHQ*AADNQQ
Trigger: CTGTTGATTGTCAGCTGCCCACTGATGTTCAGCAGT...CCGCACTGAATACTCTGGAGTCAAATGTGAGAAGAAAATACAGATAAGACGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CCA 90 bp GAAGGACAATGGCATATGCTGGGCGCAATGCATTCACCACCGTTTTTACATTTCCAAACAAGGGCTGGTTaGATTTTTGTCTCCTTCAAC +
Preference number: 4 (lower is better)
Translates to: EGQWHMLGAMHSPPFLHFQTRAG*IFVSFN
Trigger: GTTGAAGGAGACAAAAATCCAACCAGCCCTTGTTTG...GAAATGTAAAAACGGTGGTGAATGCATTGCGCCCAGCATATGCCATTGTCCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CCA 90 bp CTTCTCACATTTGACTCCAGAGTATTCAGTGCGGCAGGAACACACATTGGGAAACAAACAAGGGCTGGTTaGATTTTTGTCTCCTTCAAC +
Preference number: 4 (lower is better)
Translates to: LLTFDSRVFSAAGTHIGKQTRAG*IFVSFN
Trigger: GTTGAAGGAGACAAAAATCCAACCAGCCCTTGTTTG...TTTCCCAATGTGTGTTCCTGCCGCACTGAATACTCTGGAGTCAAATGTGAGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CCA 90 bp ATCTCCTACCAGTGTATCCTTCACGACAGACGCACACATTATTTCTCATGCAGTGTACACTCCACTCCCTaGAGAAAAGTTCCTATCAGA +
Preference number: 4 (lower is better)
Translates to: ISYQCILHDRRTHYFSCSVHSTP*RKVPIR
Trigger: TCTGATAGGAACTTTTCTCCAGGGAGTGGAGTGTAC...ACTGCATGAGAAATAATGTGTGCGTCTGTCGTGAAGGATACACTGGTAGGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR CCA 90 bp CATTTGACTCCAGAGTATTCAGTGCGGCAGGAACACACATTGGGAAATATGCATGTACACTCCACTCCCTaGAGAAAAGTTCCTATCAGA +
Preference number: 4 (lower is better)
Translates to: HLTPEYSVRQEHTLGNMHVHSTP*RKVPIR
Trigger: TCTGATAGGAACTTTTCTCCAGGGAGTGGAGTGTAC...ATGCATATTTCCCAATGTGTGTTCCTGCCGCACTGAATACTCTGGAGTCAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CCA 90 bp TGGCAAATATCTGGTGTAAGACACTGGCCTCCATTTTCACAGTGCCTGTTACAAACATTTGCAGATGTTTaGGGCAACACACTCCCTACT +
Preference number: 4 (lower is better)
Translates to: WQISGVRHWPPFSQCLLQTFADV*GNTLPT
Trigger: AGTAGGGAGTGTGTTGCCCCAAACATCTGCAAATGT...TTGTAACAGGCACTGTGAAAATGGAGGCCAGTGTCTTACACCAGATATTTGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR CCA 90 bp AGGTGGGTTACAATGTTCTTCATCACAGGTTGCTCCACCATGTCCTGGAAGACACATTGTTTCACACCTTaGTCCTACAAAACCATAAGG +
Preference number: 4 (lower is better)
Translates to: RWVTMFFITGCSTMSWKTHCFTP*SYKTIR
Trigger: CCTTATGGTTTTGTAGGACCAAGGTGTGAAACAATG...TGTCTTCCAGGACATGGTGGAGCAACCTGTGATGAAGAACATTGTAACCCACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR CCA 90 bp TGGCAAATATCTGGTGTAAGACACTGGCCTCCATTTTCACAGTGCCTGTTACAACAGCCAGGTTTGCACTaGCAAATATCTGGTGTAAGA +
Preference number: 4 (lower is better)
Translates to: WQISGVRHWPPFSQCLLQQPGLH*QISGVR
Trigger: TCTTACACCAGATATTTGCCAGTGCAAACCTGGCTG...TTGTAACAGGCACTGTGAAAATGGAGGCCAGTGTCTTACACCAGATATTTGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR CCA 90 bp TTACATTTCTGCAAGCAGATAGGTGTGTTGCATCGTTTCCCACTCCAACCAGAACAGCCAGGTTTGCACTaGCAAATATCTGGTGTAAGA +
Preference number: 4 (lower is better)
Translates to: LHFCKQIGVLHRFPLQPEQPGLH*QISGVR
Trigger: TCTTACACCAGATATTTGCCAGTGCAAACCTGGCTG...TTCTGGTTGGAGTGGGAAACGATGCAACACACCTATCTGCTTGCAGAAATGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CCA 90 bp ATGGCATATGCTGGGCGCAATGCATTCACCACCGTTTTTACATTTCTGCAAGCATTTTGGGTTGCAAATTaGTATTTGACACCGCACTCC +
Preference number: 4 (lower is better)
Translates to: MAYAGRNAFTTVFTFLQAFWVAN*YLTPHS
Trigger: GGAGTGCGGTGTCAAATACCAATTTGCAACCCAAAA...TGCTTGCAGAAATGTAAAAACGGTGGTGAATGCATTGCGCCCAGCATATGCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CCA 90 bp TCTCATGCAGTGGCCACCATTCTTACAGGGAGGGTGACAGAAAGCATTCTGACACTTGATGCTACTCAATaGCGTCTTATCTGTATTTTC +
Preference number: 4 (lower is better)
Translates to: SHAVATILTGRVTESILTLDATQ*RLICIF
Trigger: GAAAATACAGATAAGACGCCATTGAGTAGCATCAAG...TGTCAGAATGCTTTCTGTCACCCTCCCTGTAAGAATGGTGGCCACTGCATGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
3UTR CAA 72 bp AACTGTGGTCTCTTGTGTCAGCTCCTCTTTGACTTCTaGAGAAGAAAGCCTAGACCAAGCTATGTGAAATCC +
Preference number: 4 (lower is better)
Translates to: NCGLLCQLLFDF*RRKPRPSYVKS
Trigger: GGATTTCACATAGCTTGGTCTAGGCTTTCTTCTCAAGAAGTCAAAGAGGAGCTGACACAAGAGACCACAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326715.4
3UTR CAA 72 bp AGGAAACTCATGAAAGTTCTGCCGTTTCCATCTGTTTaGTCGATTGTACCTCATTTCTTGGCTGTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: RKLMKVLPFPSV*SIVPHFLAVAS
Trigger: GGAAGCCACAGCCAAGAAATGAGGTACAATCGACAAAACAGATGGAAACGGCAGAACTTTCATGAGTTTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521169.5
CDS-3UTR TCA 90 bp TGGCAATCGTCAGTTTGGCCGAGTATTAGTAATATGATTGGGCTAAAATTTGATCTGCTGGAGGTGCCATaGGTCAAAACGGACACTTCT +
Preference number: 4 (lower is better)
Translates to: WQSSVWPSISNMIGLKFDLLEVP*VKTDTS
Trigger: AGAAGTGTCCGTTTTGACTCATGGCACCTCCAGCAG...ATCAAATTTTAGCCCAATCATATTACTAATACTCGGCCAAACTGACGATTGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326715.4
CDS-3UTR TCA 90 bp TTGCTTTGGCAATCGTCAGTTTGGCCGAGTATTAGTAATATGATTGGGCTAAAAAAGCTGTCAATTGCTTaGTCTCCCCAGGAGATGGCA +
Preference number: 4 (lower is better)
Translates to: LLWQSSVWPSISNMIGLKKLSIA*SPQEMA
Trigger: TGCCATCTCCTGGGGAGATCAAGCAATTGACAGCTT...TTTTAGCCCAATCATATTACTAATACTCGGCCAAACTGACGATTGCCAAAGCAA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000326715.4
CDS-3UTR TCA 90 bp ATCTCCTACCAGTGTATCCTTCACGACAGACGCACACATTATTTCTCATGCAGTAAACCCACAATTACATaGCACTGGATAGTGAAGGCT +
Preference number: 4 (lower is better)
Translates to: ISYQCILHDRRTHYFSCSKPTIT*HWIVKA
Trigger: AGCCTTCACTATCCAGTGTCATGTAATTGTGGGTTT...ACTGCATGAGAAATAATGTGTGCGTCTGTCGTGAAGGATACACTGGTAGGAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452576.6
CDS-3UTR TCA 90 bp GACAATGGCATATGCTGGGCGCAATGCATTCACCACCGTTTTTACATTTCTGCATGTGATTCACGTAGCTaGCCATTGCACATATCAAAA +
Preference number: 4 (lower is better)
Translates to: DNGICWAQCIHHRFYISACDSRS*PLHISK
Trigger: TTTTGATATGTGCAATGGTCAGCTACGTGAATCACA...TGCAGAAATGTAAAAACGGTGGTGAATGCATTGCGCCCAGCATATGCCATTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452576.6
CDS-3UTR TCA 90 bp ACATTTCTGCAAGCAGATAGGTGTGTTGCATCGTTTCCCACTCCAACCAGAAGGTCTGACAAGAGTGTCTaGATTAATATATTCGGAGGT +
Preference number: 4 (lower is better)
Translates to: TFLQADRCVASFPTPTRRSDKSV*INIFGG
Trigger: ACCTCCGAATATATTAATTCAGACACTCTTGTCAGA...CCTTCTGGTTGGAGTGGGAAACGATGCAACACACCTATCTGCTTGCAGAAATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR TCA 90 bp ATCTCCTACCAGTGTATCCTTCACGACAGACGCACACATTATTTCTCATGCAGTAAAGGAGGAAACTCATaGAAGTTCTGCCGTTTCCAT +
Preference number: 4 (lower is better)
Translates to: ISYQCILHDRRTHYFSCSKGGNS*KFCRFH
Trigger: ATGGAAACGGCAGAACTTTCATGAGTTTCCTCCTTT...ACTGCATGAGAAATAATGTGTGCGTCTGTCGTGAAGGATACACTGGTAGGAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR TCA 90 bp CTTCTCACATTTGACTCCAGAGTATTCAGTGCGGCAGGAACACACATTGGGAAAGAGAATGTCTTCAATTaGTGTGCCATACTCTTCTGT +
Preference number: 4 (lower is better)
Translates to: LLTFDSRVFSAAGTHIGKENVFN*CAILFC
Trigger: ACAGAAGAGTATGGCACATCAATTGAAGACATTCTC...TTTCCCAATGTGTGTTCCTGCCGCACTGAATACTCTGGAGTCAAATGTGAGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR TCA 90 bp TGGCGTCTTATCTGTATTTTCTTCTCACATTTGACTCCAGAGTATTCAGTGCGGACTGTGTTTCAACTTTaGGCTCAGGTGGACAATCAC +
Preference number: 4 (lower is better)
Translates to: WRLICIFFSHLTPEYSVRTVFQL*AQVDNH
Trigger: GTGATTGTCCACCTGAGCTCAAAGTTGAAACACAGT...CCGCACTGAATACTCTGGAGTCAAATGTGAGAAGAAAATACAGATAAGACGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521169.5
ENST00000614403.4
CDS-3UTR TCA 90 bp GGACAATGGCATATGCTGGGCGCAATGCATTCACCACCGTTTTTACATTTCTGCTGTAATTCATATACTTaGTGCTACTCAATGGCGTCT +
Preference number: 4 (lower is better)
Translates to: GQWHMLGAMHSPPFLHFCCNSYT*CYSMAS
Trigger: AGACGCCATTGAGTAGCATCAAGTATATGAATTACA...GCAGAAATGTAAAAACGGTGGTGAATGCATTGCGCCCAGCATATGCCATTGTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR TCA 90 bp AATTGGTATTTGACACCGCACTCCTTCCCAGGAGGAAGGACAATGGCATATGCTTGTAATTCATATACTTaGTGCTACTCAATGGCGTCT +
Preference number: 4 (lower is better)
Translates to: NWYLTPHSFPGGRTMAYACNSYT*CYSMAS
Trigger: AGACGCCATTGAGTAGCATCAAGTATATGAATTACA...AGCATATGCCATTGTCCTTCCTCCTGGGAAGGAGTGCGGTGTCAAATACCAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR GCA 90 bp AACAGCTCTGCTATTGTGGAAAACAGTCTGTGTATAGATGGGTTCTCCAGGCATGCAGTGTGTCAGACATaGTTTTTCCTGGTAAAATCC +
Preference number: 4 (lower is better)
Translates to: NSSAIVENSLCIDGFSRHAVCQT*FFLVKS
Trigger: GGATTTTACCAGGAAAAAGCATGTCTGACACACTGC...ATGCCTGGAGAACCCATCTATACACAGACTGTTTTCCACAATAGCAGAGCTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000521169.5
CDS-3UTR GCA 90 bp GGACAATGGCATATGCTGGGCGCAATGCATTCACCACCGTTTTTACATTTCTGCTCTTCTGGAGATGTATaGTTGTTTATCTCTCTGACA +
Preference number: 4 (lower is better)
Translates to: GQWHMLGAMHSPPFLHFCSSGDV*LFISLT
Trigger: TGTCAGAGAGATAAACAAGCATACATCTCCAGAAGA...GCAGAAATGTAAAAACGGTGGTGAATGCATTGCGCCCAGCATATGCCATTGTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR GCA 90 bp CTTCTCACATTTGACTCCAGAGTATTCAGTGCGGCAGGAACACACATTGGGAAAGACAATCAACAGCTCTaGTATTGTGGAAAACAGTCT +
Preference number: 4 (lower is better)
Translates to: LLTFDSRVFSAAGTHIGKDNQQL*YCGKQS
Trigger: AGACTGTTTTCCACAATAGCAGAGCTGTTGATTGTC...TTTCCCAATGTGTGTTCCTGCCGCACTGAATACTCTGGAGTCAAATGTGAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR GCA 90 bp TGCCTCCATAAAGACATTTTGGGTTGCAAATTGGTATTTGACACCGCACTCCTTAAGGACAAGAGCAAGTaGTTGGTCCCACACATTTTC +
Preference number: 4 (lower is better)
Translates to: CLHKDILGCKLVFDTALLKDKSK*LVPHIF
Trigger: GAAAATGTGTGGGACCAAGCACTTGCTCTTGTCCTT...AAGGAGTGCGGTGTCAAATACCAATTTGCAACCCAAAATGTCTTTATGGAGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR GCA 90 bp ATAAGGACAAGTGCAGAGATTCCCAGCCAAGCATGTGCCACCATGTTGACAAGGAAAGACATTTTGGGTTaGAAATTGGTATTTGACACC +
Preference number: 4 (lower is better)
Translates to: IRTSAEIPSQACATMLTRKDILG*KLVFDT
Trigger: GGTGTCAAATACCAATTTGCAACCCAAAATGTCTTT...CCTTGTCAACATGGTGGCACATGCTTGGCTGGGAATCTCTGCACTTGTCCTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR CCA 90 bp CATTTTCCATGGTTTTTGCAATCAGGGTCACAAAGAGCAGTTTGGCAGTTAGAAAGAATGCCTGAACTGTaGTCTCTTGTGTCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: HFPWFLQSGSQRAVWQLERMPEL*SLVSAP
Trigger: AGGAGCTGACACAAGAGACCACAGTTCAGGCATTCT...TTCTAACTGCCAAACTGCTCTTTGTGACCCTGATTGCAAAAACCATGGAAAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR CCA 90 bp TTTGACTCCAGAGTATTCAGTGCGGCAGGAACACACATTGGGAAATATGCATCTATATCACCTCCTTCCTaGGCAACAAACCCACAATTA +
Preference number: 4 (lower is better)
Translates to: FDSRVFSAAGTHIGKYASISPPS*ATNPQL
Trigger: TAATTGTGGGTTTGTTGCCCAGGAAGGAGGTGATAT...AGATGCATATTTCCCAATGTGTGTTCCTGCCGCACTGAATACTCTGGAGTCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452576.6
CDS-3UTR CCA 90 bp CAATGGCGTCTTATCTGTATTTTCTTCTCACATTTGACTCCAGAGTATTCAGTGTCTTCCAGATCCGTTTaGCTGAGACTCGGGAAAGCA +
Preference number: 4 (lower is better)
Translates to: QWRLICIFFSHLTPEYSVSSRSV*LRLGKA
Trigger: TGCTTTCCCGAGTCTCAGCCAAACGGATCTGGAAGA...CACTGAATACTCTGGAGTCAAATGTGAGAAGAAAATACAGATAAGACGCCATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CCA 90 bp ATGGCATATGCTGGGCGCAATGCATTCACCACCGTTTTTACATTTCTGCAAGCATGCCGCTGCATAAATTaGGGCATTTTAATACTGAGA +
Preference number: 4 (lower is better)
Translates to: MAYAGRNAFTTVFTFLQACRCIN*GILILR
Trigger: TCTCAGTATTAAAATGCCCCAATTTATGCAGCGGCA...TGCTTGCAGAAATGTAAAAACGGTGGTGAATGCATTGCGCCCAGCATATGCCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CCA 90 bp TGCTCCACCATGTCCTGGAAGACACTGACAAATGTTAGGCTTAATACATTTTCCCAGTCTGTGTATAGATaGGTTCTCCAGGCATCCATT +
Preference number: 4 (lower is better)
Translates to: CSTMSWKTLTNVRLNTFSQSVYR*VLQASI
Trigger: AATGGATGCCTGGAGAACCCATCTATACACAGACTG...GGAAAATGTATTAAGCCTAACATTTGTCAGTGTCTTCCAGGACATGGTGGAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR CCA 90 bp AAATTGGTATTTGACACCGCACTCCTTCCCAGGAGGAAGGACAATGGCATATGCAAATCAAACAAGGGCTaGTTGGATTTTTGTCTCCTT +
Preference number: 4 (lower is better)
Translates to: KLVFDTALLPRRKDNGICKSNKG*LDFCLL
Trigger: AAGGAGACAAAAATCCAACCAGCCCTTGTTTGATTT...GCATATGCCATTGTCCTTCCTCCTGGGAAGGAGTGCGGTGTCAAATACCAATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CCA 90 bp ATCAACAGCTCTGCTATTGTGGAAAACAGTCTGTGTATAGATGGGTTCTCCAGGGAGTCCAACGTAAAATaGATGTCAGAACCTTCTGGA +
Preference number: 4 (lower is better)
Translates to: INSSAIVENSLCIDGFSRESNVK*MSEPSG
Trigger: TCCAGAAGGTTCTGACATCCATTTTACGTTGGACTC...CCTGGAGAACCCATCTATACACAGACTGTTTTCCACAATAGCAGAGCTGTTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521169.5
CDS-3UTR CCA 90 bp AGGAAGGACAATGGCATATGCTGGGCGCAATGCATTCACCACCGTTTTTACATTAACTTTGAGCTCAGGTaGACAATCACAGGAATAACT +
Preference number: 4 (lower is better)
Translates to: RKDNGICWAQCIHHRFYINFELR*TITGIT
Trigger: AGTTATTCCTGTGATTGTCCACCTGAGCTCAAAGTT...AATGTAAAAACGGTGGTGAATGCATTGCGCCCAGCATATGCCATTGTCCTTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CCA 90 bp ACCATGTCCTGGAAGACACTGACAAATGTTAGGCTTAATACATTTTCCATGGTTGCACTGGCAAATATCTaGTGTAAGACACTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: TMSWKTLTNVRLNTFSMVALANI*CKTLAS
Trigger: GGAGGCCAGTGTCTTACACCAGATATTTGCCAGTGC...AACCATGGAAAATGTATTAAGCCTAACATTTGTCAGTGTCTTCCAGGACATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR CCA 90 bp TTACATTTCTGCAAGCAGATAGGTGTGTTGCATCGTTTCCCACTCCAACCAGAACCCAAAGAATCCATTTaGACAGAGGCAAGTATTTGG +
Preference number: 4 (lower is better)
Translates to: LHFCKQIGVLHRFPLQPEPKESI*TEASIW
Trigger: CCAAATACTTGCCTCTGTCCAAATGGATTCTTTGGG...TTCTGGTTGGAGTGGGAAACGATGCAACACACCTATCTGCTTGCAGAAATGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CCA 90 bp GGACAATGGCATATGCTGGGCGCAATGCATTCACCACCGTTTTTACATTTCTGCCTTGATGCTACTCAATaGCGTCTTATCTGTATTTTC +
Preference number: 4 (lower is better)
Translates to: GQWHMLGAMHSPPFLHFCLDATQ*RLICIF
Trigger: GAAAATACAGATAAGACGCCATTGAGTAGCATCAAG...GCAGAAATGTAAAAACGGTGGTGAATGCATTGCGCCCAGCATATGCCATTGTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CCA 90 bp TGCTCCACCATGTCCTGGAAGACACTGACAAATGTTAGGCTTAATACATTTTCCGCCTTTGAGCTCAGGTaGACAATCACAGGAATAACT +
Preference number: 4 (lower is better)
Translates to: CSTMSWKTLTNVRLNTFSAFELR*TITGIT
Trigger: AGTTATTCCTGTGATTGTCCACCTGAGCTCAAAGGC...GGAAAATGTATTAAGCCTAACATTTGTCAGTGTCTTCCAGGACATGGTGGAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452576.6
CDS-3UTR CCA 90 bp GACAATGGCATATGCTGGGCGCAATGCATTCACCACCGTTTTTACATTTCTGCATCATCAACATCTTCCTaGCAATTTTTGCCTTTGAGC +
Preference number: 4 (lower is better)
Translates to: DNGICWAQCIHHRFYISASSTSS*QFLPLS
Trigger: GCTCAAAGGCAAAAATTGCCAGGAAGATGTTGATGA...TGCAGAAATGTAAAAACGGTGGTGAATGCATTGCGCCCAGCATATGCCATTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000452576.6
3UTR CAA 72 bp TCCTTCACACACATCTCTATAACACTGTCTAATCTCTaGCCAAGAAAAGCAAGACACAGCCTTCCTATGCTG +
Preference number: 4 (lower is better)
Translates to: SFTHISITLSNL*PRKARHSLPML
Trigger: CAGCATAGGAAGGCTGTGTCTTGCTTTTCTTGGCAAGAGATTAGACAGTGTTATAGAGATGTGTGTGAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521169.5
CDS-3UTR TCA 90 bp AGGCTTGTAATTCATATACTTGATGCTACTCAATGGCGTCTTATCTGTATTTTCCTGCTGGAGGTGCCATaGGTCAAAACGGACACTTCT +
Preference number: 4 (lower is better)
Translates to: RLVIHILDATQWRLICIFLLEVP*VKTDTS
Trigger: AGAAGTGTCCGTTTTGACTCATGGCACCTCCAGCAG...GAAAATACAGATAAGACGCCATTGAGTAGCATCAAGTATATGAATTACAAGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR TCA 90 bp TGTATGCTTTCAGCCAAGAAGAAGAAATGTGAATTGCTTTGGCAATCGTCAGTTTCACATATTAGGTCTTaGACAGCTGACTGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: CMLSAKKKKCELLWQSSVSHIRS*TADCWR
Trigger: CCTCCAGCAGTCAGCTGTTCAAGACCTAATATGTGA...AACTGACGATTGCCAAAGCAATTCACATTTCTTCTTCTTGGCTGAAAGCATACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326715.4
CDS-3UTR TCA 90 bp TTCGATGGCTACACTTTGTACATGAGGATTCTCCAAGAAAAAGACAGAAGCGCTACAGACACTGGGATTTaGAAGAGACAGCAGTCTTTT +
Preference number: 4 (lower is better)
Translates to: FDGYTLYMRILQEKDRSATDTGI*KRQQSF
Trigger: AAAAGACTGCTGTCTCTTTCAAATCCCAGTGTCTGT...AGCGCTTCTGTCTTTTTCTTGGAGAATCCTCATGTACAAAGTGTAGCCATCGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326715.4
CDS-3UTR TCA 90 bp TGCCTCCATAAAGACATTTTGGGTTGCAAATTGGTATTTGACACCGCACTCCTTTTCTTTCCCATCCTCTaGTATAGTGCTCAATTCAGG +
Preference number: 4 (lower is better)
Translates to: CLHKDILGCKLVFDTALLFFPIL*YSAQFR
Trigger: CCTGAATTGAGCACTATATCAGAGGATGGGAAAGAA...AAGGAGTGCGGTGTCAAATACCAATTTGCAACCCAAAATGTCTTTATGGAGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR TCA 90 bp CATTTTCCATGGTTTTTGCAATCAGGGTCACAAAGAGCAGTTTGGCAGTTAGAATCGAAGGCCACGAACTaGTACTCAAAGTTTTCACCA +
Preference number: 4 (lower is better)
Translates to: HFPWFLQSGSQRAVWQLESKATN*YSKFSP
Trigger: TGGTGAAAACTTTGAGTATCAGTTCGTGGCCTTCGA...TTCTAACTGCCAAACTGCTCTTTGTGACCCTGATTGCAAAAACCATGGAAAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR TCA 90 bp TGGCAAATATCTGGTGTAAGACACTGGCCTCCATTTTCACAGTGCCTGTTACAATGTCCTGGAAGACACTaGCAAATGTTAGGCTTAATA +
Preference number: 4 (lower is better)
Translates to: WQISGVRHWPPFSQCLLQCPGRH*QMLGLI
Trigger: TATTAAGCCTAACATTTGTCAGTGTCTTCCAGGACA...TTGTAACAGGCACTGTGAAAATGGAGGCCAGTGTCTTACACCAGATATTTGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR TCA 90 bp GCCTCCATAAAGACATTTTGGGTTGCAAATTGGTATTTGACACCGCACTCCTTCTGTCCTGGAAGACACTaGCAAATGTTAGGCTTAATA +
Preference number: 4 (lower is better)
Translates to: ASIKTFWVANWYLTPHSFCPGRH*QMLGLI
Trigger: TATTAAGCCTAACATTTGTCAGTGTCTTCCAGGACA...GAAGGAGTGCGGTGTCAAATACCAATTTGCAACCCAAAATGTCTTTATGGAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR GCA 90 bp GCGTCTTATCTGTATTTTCTTCTCACATTTGACTCCAGAGTATTCAGTGCGGCAAAAAGACAGAAGCGCTaGAGAATATCCTGTCTCCAA +
Preference number: 4 (lower is better)
Translates to: ASYLYFLLTFDSRVFSAAKRQKR*RISCLQ
Trigger: TTGGAGACAGGATATTCTGCAGCGCTTCTGTCTTTT...TGCCGCACTGAATACTCTGGAGTCAAATGTGAGAAGAAAATACAGATAAGACGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR GCA 90 bp GCGTCTTATCTGTATTTTCTTCTCACATTTGACTCCAGAGTATTCAGTGCGGCAATCAGCACGGATAAATaGCCCAGAAGAAAACCAGAT +
Preference number: 4 (lower is better)
Translates to: ASYLYFLLTFDSRVFSAAISTDK*PRRKPD
Trigger: ATCTGGTTTTCTTCTGGGGCATTTATCCGTGCTGAT...TGCCGCACTGAATACTCTGGAGTCAAATGTGAGAAGAAAATACAGATAAGACGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR GCA 90 bp CAATGGCGTCTTATCTGTATTTTCTTCTCACATTTGACTCCAGAGTATTCAGTGCTTGTTGGCTTAACATaGCTCTTTCTCCCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: QWRLICIFFSHLTPEYSVLVGLT*LFLPWA
Trigger: TGCCCAAGGGAGAAAGAGGCATGTTAAGCCAACAAG...CACTGAATACTCTGGAGTCAAATGTGAGAAGAAAATACAGATAAGACGCCATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR GCA 90 bp CATATACTTGATGCTACTCAATGGCGTCTTATCTGTATTTTCTTCTCACATTTGTCCCAGCCAAGCATGTaGCACCATGTTGACAAGGTG +
Preference number: 4 (lower is better)
Translates to: HILDATQWRLICIFFSHLSQPSM*HHVDKV
Trigger: CACCTTGTCAACATGGTGGCACATGCTTGGCTGGGA...CAAATGTGAGAAGAAAATACAGATAAGACGCCATTGAGTAGCATCAAGTATATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR GCA 90 bp CATTTGACTCCAGAGTATTCAGTGCGGCAGGAACACACATTGGGAAATATGCATCCTCCATTTTCACAGTaGCTGTTACAAACCATTGTT +
Preference number: 4 (lower is better)
Translates to: HLTPEYSVRQEHTLGNMHPPFSQ*LLQTIV
Trigger: AACAATGGTTTGTAACAGGCACTGTGAAAATGGAGG...ATGCATATTTCCCAATGTGTGTTCCTGCCGCACTGAATACTCTGGAGTCAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR GCA 90 bp ATCTCCTACCAGTGTATCCTTCACGACAGACGCACACATTATTTCTCATGCAGTACACATTGGGAAATATaGATCTGCCTCCATAAAGAC +
Preference number: 4 (lower is better)
Translates to: ISYQCILHDRRTHYFSCSTHWEI*ICLHKD
Trigger: GTCTTTATGGAGGCAGATGCATATTTCCCAATGTGT...ACTGCATGAGAAATAATGTGTGCGTCTGTCGTGAAGGATACACTGGTAGGAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR CCA 90 bp TTGCTTTGGCAATCGTCAGTTTGGCCGAGTATTAGTAATATGATTGGGCTAAAATCATCTCAACACATTTaGTTGGCATCTCGGCAGGTC +
Preference number: 4 (lower is better)
Translates to: LLWQSSVWPSISNMIGLKSSQHI*LASRQV
Trigger: GACCTGCCGAGATGCCAACCAAATGTGTTGAGATGA...TTTTAGCCCAATCATATTACTAATACTCGGCCAAACTGACGATTGCCAAAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326715.4
CDS-3UTR CCA 90 bp GCATCTGCCTCCATAAAGACATTTTGGGTTGCAAATTGGTATTTGACACCGCACTGCCGCTGCATAAATTaGGGCATTTTAATACTGAGA +
Preference number: 4 (lower is better)
Translates to: ASASIKTFWVANWYLTPHCRCIN*GILILR
Trigger: TCTCAGTATTAAAATGCCCCAATTTATGCAGCGGCA...GTGCGGTGTCAAATACCAATTTGCAACCCAAAATGTCTTTATGGAGGCAGATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CCA 90 bp ACCATGTCCTGGAAGACACTGACAAATGTTAGGCTTAATACATTTTCCATGGTTACTGCTGAACATCAGTaGGCAGCTGACAATCAACAG +
Preference number: 4 (lower is better)
Translates to: TMSWKTLTNVRLNTFSMVTAEHQ*AADNQQ
Trigger: CTGTTGATTGTCAGCTGCCCACTGATGTTCAGCAGT...AACCATGGAAAATGTATTAAGCCTAACATTTGTCAGTGTCTTCCAGGACATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR CCA 90 bp GACAATGGCATATGCTGGGCGCAATGCATTCACCACCGTTTTTACATTTCTGCAAAATCAAACAAGGGCTaGTTGGATTTTTGTCTCCTT +
Preference number: 4 (lower is better)
Translates to: DNGICWAQCIHHRFYISAKSNKG*LDFCLL
Trigger: AAGGAGACAAAAATCCAACCAGCCCTTGTTTGATTT...TGCAGAAATGTAAAAACGGTGGTGAATGCATTGCGCCCAGCATATGCCATTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CCA 90 bp TCGATTGTACCTCATTTCTTGGCTGTGGCTTCCCCGGCCTTGTGTATATTTCTTAAATCAAACAAGGGCTaGTTGGATTTTTGTCTCCTT +
Preference number: 4 (lower is better)
Translates to: SIVPHFLAVASPALCIFLKSNKG*LDFCLL
Trigger: AAGGAGACAAAAATCCAACCAGCCCTTGTTTGATTT...AAGAAATATACACAAGGCCGGGGAAGCCACAGCCAAGAAATGAGGTACAATCGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521169.5
CDS-3UTR CCA 90 bp TGCCTCCATAAAGACATTTTGGGTTGCAAATTGGTATTTGACACCGCACTCCTTGAGTCCAACGTAAAATaGATGTCAGAACCTTCTGGA +
Preference number: 4 (lower is better)
Translates to: CLHKDILGCKLVFDTALLESNVK*MSEPSG
Trigger: TCCAGAAGGTTCTGACATCCATTTTACGTTGGACTC...AAGGAGTGCGGTGTCAAATACCAATTTGCAACCCAAAATGTCTTTATGGAGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CCA 90 bp ATCAACAGCTCTGCTATTGTGGAAAACAGTCTGTGTATAGATGGGTTCTCCAGGCATTGTTTCACACCTTaGTCCTACAAAACCATAAGG +
Preference number: 4 (lower is better)
Translates to: INSSAIVENSLCIDGFSRHCFTP*SYKTIR
Trigger: CCTTATGGTTTTGTAGGACCAAGGTGTGAAACAATG...CCTGGAGAACCCATCTATACACAGACTGTTTTCCACAATAGCAGAGCTGTTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521169.5
CDS-3UTR CCA 90 bp GCGTCTTATCTGTATTTTCTTCTCACATTTGACTCCAGAGTATTCAGTGCGGCAACAGAGGCAAGTATTTaGCTTATTACACGAACCACC +
Preference number: 4 (lower is better)
Translates to: ASYLYFLLTFDSRVFSAATEASI*LITRTT
Trigger: GGTGGTTCGTGTAATAAGCCAAATACTTGCCTCTGT...TGCCGCACTGAATACTCTGGAGTCAAATGTGAGAAGAAAATACAGATAAGACGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CCA 90 bp AGAAAGCATTCTGACAGTGTTCCCCAAAGAATCCATTTGGACAGAGGCAAGTATCCCAAAGAATCCATTTaGACAGAGGCAAGTATTTGG +
Preference number: 4 (lower is better)
Translates to: RKHSDSVPQRIHLDRGKYPKESI*TEASIW
Trigger: CCAAATACTTGCCTCTGTCCAAATGGATTCTTTGGG...ATACTTGCCTCTGTCCAAATGGATTCTTTGGGGAACACTGTCAGAATGCTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR TCA 90 bp ATCAACAGCTCTGCTATTGTGGAAAACAGTCTGTGTATAGATGGGTTCTCCAGGTTGAAGGTAATTCTTTaGAGCCTTTGCCAAAAACTC +
Preference number: 4 (lower is better)
Translates to: INSSAIVENSLCIDGFSRLKVIL*SLCQKL
Trigger: GAGTTTTTGGCAAAGGCTTCAAAGAATTACCTTCAA...CCTGGAGAACCCATCTATACACAGACTGTTTTCCACAATAGCAGAGCTGTTGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521169.5
CDS-3UTR TCA 90 bp TTACATTTCTGCAAGCAGATAGGTGTGTTGCATCGTTTCCCACTCCAACCAGAATTGAAGGTAATTCTTTaGAGCCTTTGCCAAAAACTC +
Preference number: 4 (lower is better)
Translates to: LHFCKQIGVLHRFPLQPELKVIL*SLCQKL
Trigger: GAGTTTTTGGCAAAGGCTTCAAAGAATTACCTTCAA...TTCTGGTTGGAGTGGGAAACGATGCAACACACCTATCTGCTTGCAGAAATGTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR TCA 90 bp GCATCTGCCTCCATAAAGACATTTTGGGTTGCAAATTGGTATTTGACACCGCACGATATTTACAAATGGTaGAGGCATTTCCACTTGTTG +
Preference number: 4 (lower is better)
Translates to: ASASIKTFWVANWYLTPHDIYKW*RHFHLL
Trigger: CAACAAGTGGAAATGCCTTCACCATTTGTAAATATC...GTGCGGTGTCAAATACCAATTTGCAACCCAAAATGTCTTTATGGAGGCAGATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR TCA 90 bp TGCCTCCATAAAGACATTTTGGGTTGCAAATTGGTATTTGACACCGCACTCCTTTGTCCTGGAAGACACTaGCAAATGTTAGGCTTAATA +
Preference number: 4 (lower is better)
Translates to: CLHKDILGCKLVFDTALLCPGRH*QMLGLI
Trigger: TATTAAGCCTAACATTTGTCAGTGTCTTCCAGGACA...AAGGAGTGCGGTGTCAAATACCAATTTGCAACCCAAAATGTCTTTATGGAGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR TCA 90 bp TGGCGTCTTATCTGTATTTTCTTCTCACATTTGACTCCAGAGTATTCAGTGCGGTTTTCTTCTCACATTTaGCTCCAGAGTATTCAGTGC +
Preference number: 4 (lower is better)
Translates to: WRLICIFFSHLTPEYSVRFSSHI*LQSIQC
Trigger: GCACTGAATACTCTGGAGTCAAATGTGAGAAGAAAA...CCGCACTGAATACTCTGGAGTCAAATGTGAGAAGAAAATACAGATAAGACGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR TCA 90 bp TTACATTTCTGCAAGCAGATAGGTGTGTTGCATCGTTTCCCACTCCAACCAGAATGTAATTCATATACTTaGTGCTACTCAATGGCGTCT +
Preference number: 4 (lower is better)
Translates to: LHFCKQIGVLHRFPLQPECNSYT*CYSMAS
Trigger: AGACGCCATTGAGTAGCATCAAGTATATGAATTACA...TTCTGGTTGGAGTGGGAAACGATGCAACACACCTATCTGCTTGCAGAAATGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR GCA 90 bp GCATCTGCCTCCATAAAGACATTTTGGGTTGCAAATTGGTATTTGACACCGCACTCTTCTGGAGATGTATaGTTGTTTATCTCTCTGACA +
Preference number: 4 (lower is better)
Translates to: ASASIKTFWVANWYLTPHSSGDV*LFISLT
Trigger: TGTCAGAGAGATAAACAAGCATACATCTCCAGAAGA...GTGCGGTGTCAAATACCAATTTGCAACCCAAAATGTCTTTATGGAGGCAGATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CCA 90 bp TGCTCCACCATGTCCTGGAAGACACTGACAAATGTTAGGCTTAATACATTTTCCATTCTTGGCTTTCGATaGCTACACTTTGTACATGAG +
Preference number: 4 (lower is better)
Translates to: CSTMSWKTLTNVRLNTFSILGFR*LHFVHE
Trigger: CTCATGTACAAAGTGTAGCCATCGAAAGCCAAGAAT...GGAAAATGTATTAAGCCTAACATTTGTCAGTGTCTTCCAGGACATGGTGGAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR CCA 90 bp CATTTGACTCCAGAGTATTCAGTGCGGCAGGAACACACATTGGGAAATATGCATATAGCAGTAAGCAGTTaGGACATCCTTTACTTTGAT +
Preference number: 4 (lower is better)
Translates to: HLTPEYSVRQEHTLGNMHIAVSS*DILYFD
Trigger: ATCAAAGTAAAGGATGTCCCAACTGCTTACTGCTAT...ATGCATATTTCCCAATGTGTGTTCCTGCCGCACTGAATACTCTGGAGTCAAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452576.6
CDS-3UTR CCA 90 bp TGCCTCCATAAAGACATTTTGGGTTGCAAATTGGTATTTGACACCGCACTCCTTACCATGTTGACAAGGTaGGTTACAATGTTCTTCATC +
Preference number: 4 (lower is better)
Translates to: CLHKDILGCKLVFDTALLTMLTR*VTMFFI
Trigger: GATGAAGAACATTGTAACCCACCTTGTCAACATGGT...AAGGAGTGCGGTGTCAAATACCAATTTGCAACCCAAAATGTCTTTATGGAGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR TCA 90 bp ACCATGTCCTGGAAGACACTGACAAATGTTAGGCTTAATACATTTTCCATGGTTTCCTCTTTGACTTCTTaGGAAGAAAGCCTAGACCAA +
Preference number: 4 (lower is better)
Translates to: TMSWKTLTNVRLNTFSMVSSLTS*EESLDQ
Trigger: TTGGTCTAGGCTTTCTTCTCAAGAAGTCAAAGAGGA...AACCATGGAAAATGTATTAAGCCTAACATTTGTCAGTGTCTTCCAGGACATGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR TCA 90 bp TGCCTCCATAAAGACATTTTGGGTTGCAAATTGGTATTTGACACCGCACTCCTTGACTTCAAAATCACGTaGCATACTCTTATAAAGCAC +
Preference number: 4 (lower is better)
Translates to: CLHKDILGCKLVFDTALLDFKIT*HTLIKH
Trigger: GTGCTTTATAAGAGTATGTCACGTGATTTTGAAGTC...AAGGAGTGCGGTGTCAAATACCAATTTGCAACCCAAAATGTCTTTATGGAGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452576.6
CDS-3UTR TCA 90 bp TCAGATACACATGATCCACCATTCAAGCAATCACAAGACTTCACAGTCACCTCAGATATTTACAAATGGTaGAGGCATTTCCACTTGTTG +
Preference number: 4 (lower is better)
Translates to: SDTHDPPFKQSQDFTVTSDIYKW*RHFHLL
Trigger: CAACAAGTGGAAATGCCTTCACCATTTGTAAATATC...TGAGGTGACTGTGAAGTCTTGTGATTGCTTGAATGGTGGATCATGTGTATCTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521169.5
CDS-3UTR GCA 90 bp CATATACTTGATGCTACTCAATGGCGTCTTATCTGTATTTTCTTCTCACATTTGCATACCAGCCAGGTTTaGACTGGCAAATATCTGGTG +
Preference number: 4 (lower is better)
Translates to: HILDATQWRLICIFFSHLHTSQV*TGKYLV
Trigger: CACCAGATATTTGCCAGTGCAAACCTGGCTGGTATG...CAAATGTGAGAAGAAAATACAGATAAGACGCCATTGAGTAGCATCAAGTATATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR GCA 90 bp TGGCAAATATCTGGTGTAAGACACTGGCCTCCATTTTCACAGTGCCTGTTACAAAAAGACATTTTGGGTTaGAAATTGGTATTTGACACC +
Preference number: 4 (lower is better)
Translates to: WQISGVRHWPPFSQCLLQKDILG*KLVFDT
Trigger: GGTGTCAAATACCAATTTGCAACCCAAAATGTCTTT...TTGTAACAGGCACTGTGAAAATGGAGGCCAGTGTCTTACACCAGATATTTGCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR GCA 90 bp GCCTCCATAAAGACATTTTGGGTTGCAAATTGGTATTTGACACCGCACTCCTTCAAAGACATTTTGGGTTaGAAATTGGTATTTGACACC +
Preference number: 4 (lower is better)
Translates to: ASIKTFWVANWYLTPHSFKDILG*KLVFDT
Trigger: GGTGTCAAATACCAATTTGCAACCCAAAATGTCTTT...GAAGGAGTGCGGTGTCAAATACCAATTTGCAACCCAAAATGTCTTTATGGAGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CCA 90 bp CATTTTCCATGGTTTTTGCAATCAGGGTCACAAAGAGCAGTTTGGCAGTTAGAAAACTTTGAGCTCAGGTaGACAATCACAGGAATAACT +
Preference number: 4 (lower is better)
Translates to: HFPWFLQSGSQRAVWQLENFELR*TITGIT
Trigger: AGTTATTCCTGTGATTGTCCACCTGAGCTCAAAGTT...TTCTAACTGCCAAACTGCTCTTTGTGACCCTGATTGCAAAAACCATGGAAAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000521169.5
CDS-3UTR CCA 90 bp TTGCTTTGGCAATCGTCAGTTTGGCCGAGTATTAGTAATATGATTGGGCTAAAAAAATGTGAATTGCTTTaGCAATCGTCAGTTTGGCCG +
Preference number: 4 (lower is better)
Translates to: LLWQSSVWPSISNMIGLKKCELL*QSSVWP
Trigger: CGGCCAAACTGACGATTGCCAAAGCAATTCACATTT...TTTTAGCCCAATCATATTACTAATACTCGGCCAAACTGACGATTGCCAAAGCAA
40% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000326715.4
CDS-3UTR TCA 90 bp CATATACTTGATGCTACTCAATGGCGTCTTATCTGTATTTTCTTCTCACATTTGCAGGTCTGTCAAGGATaGGAAATCTATACCATCCAG +
Preference number: 4 (lower is better)
Translates to: HILDATQWRLICIFFSHLQVCQG*EIYTIQ
Trigger: CTGGATGGTATAGATTTCTCATCCTTGACAGACCTG...CAAATGTGAGAAGAAAATACAGATAAGACGCCATTGAGTAGCATCAAGTATATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR TCA 90 bp CAATGGCGTCTTATCTGTATTTTCTTCTCACATTTGACTCCAGAGTATTCAGTGGCTACACTTTGTACATaGGGATTCTCCAAGAAAAAG +
Preference number: 4 (lower is better)
Translates to: QWRLICIFFSHLTPEYSVATLCT*GFSKKK
Trigger: CTTTTTCTTGGAGAATCCTCATGTACAAAGTGTAGC...CACTGAATACTCTGGAGTCAAATGTGAGAAGAAAATACAGATAAGACGCCATTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR GCA 90 bp CATATACTTGATGCTACTCAATGGCGTCTTATCTGTATTTTCTTCTCACATTTGGTGCTGAACAAAAACTaGCATGTTGCACAAGCTGTC +
Preference number: 4 (lower is better)
Translates to: HILDATQWRLICIFFSHLVLNKN*HVAQAV
Trigger: GACAGCTTGTGCAACATGGCAGTTTTTGTTCAGCAC...CAAATGTGAGAAGAAAATACAGATAAGACGCCATTGAGTAGCATCAAGTATATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR GCA 90 bp CATATACTTGATGCTACTCAATGGCGTCTTATCTGTATTTTCTTCTCACATTTGATATGCTGGGCGCAATaGATTCACCACCGTTTTTAC +
Preference number: 4 (lower is better)
Translates to: HILDATQWRLICIFFSHLICWAQ*IHHRFY
Trigger: GTAAAAACGGTGGTGAATGCATTGCGCCCAGCATAT...CAAATGTGAGAAGAAAATACAGATAAGACGCCATTGAGTAGCATCAAGTATATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CCA 90 bp CATATACTTGATGCTACTCAATGGCGTCTTATCTGTATTTTCTTCTCACATTTGACCTACAGAAAAGCCTaGACTCAATCAACTCCACCA +
Preference number: 4 (lower is better)
Translates to: HILDATQWRLICIFFSHLTYRKA*TQSTPP
Trigger: TGGTGGAGTTGATTGAGTCCAGGCTTTTCTGTAGGT...CAAATGTGAGAAGAAAATACAGATAAGACGCCATTGAGTAGCATCAAGTATATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CCA 90 bp TTGCTTTGGCAATCGTCAGTTTGGCCGAGTATTAGTAATATGATTGGGCTAAAAATTCTTGGCTTTCGATaGCTACACTTTGTACATGAG +
Preference number: 4 (lower is better)
Translates to: LLWQSSVWPSISNMIGLKILGFR*LHFVHE
Trigger: CTCATGTACAAAGTGTAGCCATCGAAAGCCAAGAAT...TTTTAGCCCAATCATATTACTAATACTCGGCCAAACTGACGATTGCCAAAGCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326715.4
CDS-3UTR CCA 90 bp CAATGGCGTCTTATCTGTATTTTCTTCTCACATTTGACTCCAGAGTATTCAGTGTGCCGCTGCATAAATTaGGGCATTTTAATACTGAGA +
Preference number: 4 (lower is better)
Translates to: QWRLICIFFSHLTPEYSVCRCIN*GILILR
Trigger: TCTCAGTATTAAAATGCCCCAATTTATGCAGCGGCA...CACTGAATACTCTGGAGTCAAATGTGAGAAGAAAATACAGATAAGACGCCATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CCA 90 bp CATATACTTGATGCTACTCAATGGCGTCTTATCTGTATTTTCTTCTCACATTTGCAGCCAGGTTTGCACTaGCAAATATCTGGTGTAAGA +
Preference number: 4 (lower is better)
Translates to: HILDATQWRLICIFFSHLQPGLH*QISGVR
Trigger: TCTTACACCAGATATTTGCCAGTGCAAACCTGGCTG...CAAATGTGAGAAGAAAATACAGATAAGACGCCATTGAGTAGCATCAAGTATATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR TCA 90 bp CATATACTTGATGCTACTCAATGGCGTCTTATCTGTATTTTCTTCTCACATTTGCTCGAGAAAAATCTGTaGCAGCAGTGTAGTACACAA +
Preference number: 4 (lower is better)
Translates to: HILDATQWRLICIFFSHLLEKNL*QQCSTQ
Trigger: TTGTGTACTACACTGCTGTCACAGATTTTTCTCGAG...CAAATGTGAGAAGAAAATACAGATAAGACGCCATTGAGTAGCATCAAGTATATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452576.6
CDS-3UTR TCA 90 bp CAATGGCGTCTTATCTGTATTTTCTTCTCACATTTGACTCCAGAGTATTCAGTGTCTGACAAGAGTGTCTaGATTAATATATTCGGAGGT +
Preference number: 4 (lower is better)
Translates to: QWRLICIFFSHLTPEYSVSDKSV*INIFGG
Trigger: ACCTCCGAATATATTAATTCAGACACTCTTGTCAGA...CACTGAATACTCTGGAGTCAAATGTGAGAAGAAAATACAGATAAGACGCCATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CCA 90 bp CATATACTTGATGCTACTCAATGGCGTCTTATCTGTATTTTCTTCTCACATTTGACAGAGGCAAGTATTTaGCTTATTACACGAACCACC +
Preference number: 4 (lower is better)
Translates to: HILDATQWRLICIFFSHLTEASI*LITRTT
Trigger: GGTGGTTCGTGTAATAAGCCAAATACTTGCCTCTGT...CAAATGTGAGAAGAAAATACAGATAAGACGCCATTGAGTAGCATCAAGTATATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR TCA 90 bp CATATACTTGATGCTACTCAATGGCGTCTTATCTGTATTTTCTTCTCACATTTGTTTTCTTCTCACATTTaGCTCCAGAGTATTCAGTGC +
Preference number: 4 (lower is better)
Translates to: HILDATQWRLICIFFSHLFSSHI*LQSIQC
Trigger: GCACTGAATACTCTGGAGTCAAATGTGAGAAGAAAA...CAAATGTGAGAAGAAAATACAGATAAGACGCCATTGAGTAGCATCAAGTATATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR GCA 90 bp CATATACTTGATGCTACTCAATGGCGTCTTATCTGTATTTTCTTCTCACATTTGACACATTGGGAAATATaGATCTGCCTCCATAAAGAC +
Preference number: 4 (lower is better)
Translates to: HILDATQWRLICIFFSHLTHWEI*ICLHKD
Trigger: GTCTTTATGGAGGCAGATGCATATTTCCCAATGTGT...CAAATGTGAGAAGAAAATACAGATAAGACGCCATTGAGTAGCATCAAGTATATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR TCA 90 bp CATATACTTGATGCTACTCAATGGCGTCTTATCTGTATTTTCTTCTCACATTTGAAGCACCATCATATATaGCCGTTATTTTGGGATTAC +
Preference number: 4 (lower is better)
Translates to: HILDATQWRLICIFFSHLKHHHI*PLFWDY
Trigger: GTAATCCCAAAATAACGGTCATATATGATGGTGCTT...CAAATGTGAGAAGAAAATACAGATAAGACGCCATTGAGTAGCATCAAGTATATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
3UTR CAA 72 bp TTTGCCAAAAACTCTCACCATCATACAATTATATTTTaGAACATCACAGAATCCAGCATTCCCAAGCTCTGT +
Preference number: 4 (lower is better)
Translates to: FAKNSHHHTIIF*NITESSIPKLC
Trigger: ACAGAGCTTGGGAATGCTGGATTCTGTGATGTTCAAAAATATAATTGTATGATGGTGAGAGTTTTTGGCAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521169.5
CDS CCA 90 bp GATCACCAGCACGCAGGCTCCGCCAGGCATCGCTGCTTCCGCAGGTaGGGCGAAAGGCGTCGCAGAGCCCGGGCCGCGGGTGCCAGGAGG +
Preference number: 5 (lower is better)
Translates to: DHQHAGSARHRCFRR*GERRRRARAAGARR
Trigger: CCTCCTGGCACCCGCGGCCCGGGCTCTGCGACGCCTTTCGCCCCACCTGCGGAAGCAGCGATGCCTGGCGGAGCCTGCGTGCTGGTGATC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275358.8
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS GCA 90 bp GAACATCAGCGCGATCACCAGCACGCAGGCTCCGCCAGGCATCGCTaGTTCCGCAGGTGGGGCGAAAGGCGTCGCAGAGCCCGGGCCGCG +
Preference number: 5 (lower is better)
Translates to: EHQRDHQHAGSARHR*FRRWGERRRRARAA
Trigger: CGCGGCCCGGGCTCTGCGACGCCTTTCGCCCCACCTGCGGAAGCAGCGATGCCTGGCGGAGCCTGCGTGCTGGTGATCGCGCTGATGTTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275358.8
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS GCA 90 bp CTGTTGCTGCTTGGAACAGGGAAGCTCCGCGTCCTCGTTCTGGGGTaGACCCAGTCCTTTCGTGGGATAGAGCCTTCGCGTAATCCGTCT +
Preference number: 5 (lower is better)
Translates to: LLLLGTGKLRVLVLG*TQSFRGIEPSRNPS
Trigger: AGACGGATTACGCGAAGGCTCTATCCCACGAAAGGACTGGGTGCACCCCAGAACGAGGACGCGGAGCTTCCCTGTTCCAAGCAGCAACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CAA 90 bp TGGTATTTGACACCGCACTCCTTCCCAGGAGGAAGGACAATGGCATATGCTGGGTCAGTCTGTTGCTGCTaGGAACAGGGAAGCTCCGCG +
Preference number: 5 (lower is better)
Translates to: WYLTPHSFPGGRTMAYAGSVCCC*EQGSSA
Trigger: CGCGGAGCTTCCCTGTTCCAAGCAGCAACAGACTGA...CCCAGCATATGCCATTGTCCTTCCTCCTGGGAAGGAGTGCGGTGTCAAATACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CAA 90 bp GTATTTGACACCGCACTCCTTCCCAGGAGGAAGGACAATGGCATATGCTGGGCGCTGCAGAGGAAACACTaGCCCCTTCAGGACCAGAGT +
Preference number: 5 (lower is better)
Translates to: VFDTALLPRRKDNGICWALQRKH*PLQDQS
Trigger: ACTCTGGTCCTGAAGGGGCAAGTGTTTCCTCTGCAG...CGCCCAGCATATGCCATTGTCCTTCCTCCTGGGAAGGAGTGCGGTGTCAAATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CAA 90 bp AAGCCTGGACTCAATCAACTCCACCAGAACCTCTGGCCTTCCTGCAGGTGGAGGTCTCAACACATTTGGTaGGCATCTCGGCAGGTCTGT +
Preference number: 5 (lower is better)
Translates to: KPGLNQLHQNLWPSCRWRSQHIW*ASRQVC
Trigger: ACAGACCTGCCGAGATGCCAACCAAATGTGTTGAGA...CCTCCACCTGCAGGAAGGCCAGAGGTTCTGGTGGAGTTGATTGAGTCCAGGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326715.4
CDS-3UTR CAA 90 bp CAGACAGGGTCGCACAAAGCTGTACTACAGGTGGGTCCATACCAGCCAGGTTTGCCAAGACCACAAGGGTaGGATTGGCACCCACTAATG +
Preference number: 5 (lower is better)
Translates to: QTGSHKAVLQVGPYQPGLPRPQG*DWHPLM
Trigger: CATTAGTGGGTGCCAATCCAACCCTTGTGGTCTTGG...CAAACCTGGCTGGTATGGACCCACCTGTAGTACAGCTTTGTGCGACCCTGTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR CAA 90 bp ACACCGCACTCCTTCCCAGGAGGAAGGACAATGGCATATGCTGGGCGCAATGCACCATACCAGCCAGGTTaGCACTGGCAAATATCTGGT +
Preference number: 5 (lower is better)
Translates to: TPHSFPGGRTMAYAGRNAPYQPG*HWQISG
Trigger: ACCAGATATTTGCCAGTGCAAACCTGGCTGGTATGG...TGCATTGCGCCCAGCATATGCCATTGTCCTTCCTCCTGGGAAGGAGTGCGGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CAA 90 bp AGAAAAGCCTGGACTCAATCAACTCCACCAGAACCTCTGGCCTTCCTGCAGGTGCAAGCTGTCAATTGCTaGATCTCCCCAGGAGATGGC +
Preference number: 5 (lower is better)
Translates to: RKAWTQSTPPEPLAFLQVQAVNC*ISPGDG
Trigger: GCCATCTCCTGGGGAGATCAAGCAATTGACAGCTTG...CACCTGCAGGAAGGCCAGAGGTTCTGGTGGAGTTGATTGAGTCCAGGCTTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326715.4
CDS-3UTR CAA 90 bp AGACAGGGTCGCACAAAGCTGTACTACAGGTGGGTCCATACCAGCCAGGTTTGCTGCACAAGCTGTCAATaGCTTGATCTCCCCAGGAGA +
Preference number: 5 (lower is better)
Translates to: RQGRTKLYYRWVHTSQVCCTSCQ*LDLPRR
Trigger: TCTCCTGGGGAGATCAAGCAATTGACAGCTTGTGCA...GCAAACCTGGCTGGTATGGACCCACCTGTAGTACAGCTTTGTGCGACCCTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR CAA 90 bp TATTTGACACCGCACTCCTTCCCAGGAGGAAGGACAATGGCATATGCTGGGCGCGTGGCTTCCCCGGCCTaGTGTATATTTCTTATTGGC +
Preference number: 5 (lower is better)
Translates to: YLTPHSFPGGRTMAYAGRVASPA*CIFLIG
Trigger: GCCAATAAGAAATATACACAAGGCCGGGGAAGCCAC...GCGCCCAGCATATGCCATTGTCCTTCCTCCTGGGAAGGAGTGCGGTGTCAAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CAA 90 bp GTATTTGACACCGCACTCCTTCCCAGGAGGAAGGACAATGGCATATGCTGGGCGCGGCAGGAACACACATaGGGAAATATGCATCTGCCT +
Preference number: 5 (lower is better)
Translates to: VFDTALLPRRKDNGICWARQEHT*GNMHLP
Trigger: AGGCAGATGCATATTTCCCAATGTGTGTTCCTGCCG...CGCCCAGCATATGCCATTGTCCTTCCTCCTGGGAAGGAGTGCGGTGTCAAATAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CAA 90 bp AGGTGGGTTACAATGTTCTTCATCACAGGTTGCTCCACCATGTCCTGGAAGACATCAGTCTGTTGCTGCTaGGAACAGGGAAGCTCCGCG +
Preference number: 5 (lower is better)
Translates to: RWVTMFFITGCSTMSWKTSVCCC*EQGSSA
Trigger: CGCGGAGCTTCCCTGTTCCAAGCAGCAACAGACTGA...TGTCTTCCAGGACATGGTGGAGCAACCTGTGATGAAGAACATTGTAACCCACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR CAA 90 bp AACCATAAGGACAAGTGCAGAGATTCCCAGCCAAGCATGTGCCACCATGTTGACTCCATGCACTGCCCATaGCCGCTGCATAAATTGGGG +
Preference number: 5 (lower is better)
Translates to: NHKDKCRDSQPSMCHHVDSMHCP*PLHKLG
Trigger: CCCCAATTTATGCAGCGGCAATGGGCAGTGCATGGA...GTCAACATGGTGGCACATGCTTGGCTGGGAATCTCTGCACTTGTCCTTATGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR CAA 90 bp CTACAGGTGGGTCCATACCAGCCAGGTTTGCACTGGCAAATATCTGGTGTAAGATTACACGAACCACCATaGAGGCAGACAGGGTCGCAC +
Preference number: 5 (lower is better)
Translates to: LQVGPYQPGLHWQISGVRLHEPP*RQTGSH
Trigger: GTGCGACCCTGTCTGCCTCAATGGTGGTTCGTGTAA...TCTTACACCAGATATTTGCCAGTGCAAACCTGGCTGGTATGGACCCACCTGTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS TCA 90 bp ACAAGCTGTCAATTGCTTGATCTCCCCAGGAGATGGCAGTGTTTCTaGATCTCTCAGAGACAGCCAGATGGGGGCCTGAGTTCCACAATG +
Preference number: 5 (lower is better)
Translates to: TSCQLLDLPRRWQCF*ISQRQPDGGLSSTM
Trigger: CATTGTGGAACTCAGGCCCCCATCTGGCTGTCTCTGAGAGATTCAGAAACACTGCCATCTCCTGGGGAGATCAAGCAATTGACAGCTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000275358.8
ENST00000326715.4
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS CCA 90 bp CCCCAGGAGATGGCAGTGTTTCTGAATCTCTCAGAGACAGCCAGATaGGGGCCTGAGTTCCACAATGGTTCATCTCAACACATTTGGTTG +
Preference number: 5 (lower is better)
Translates to: PQEMAVFLNLSETAR*GPEFHNGSSQHIWL
Trigger: CAACCAAATGTGTTGAGATGAACCATTGTGGAACTCAGGCCCCCATCTGGCTGTCTCTGAGAGATTCAGAAACACTGCCATCTCCTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000275358.8
ENST00000326715.4
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CAA 90 bp TGGTATTTGACACCGCACTCCTTCCCAGGAGGAAGGACAATGGCATATGCTGGGTTCATCTCAACACATTaGGTTGGCATCTCGGCAGGT +
Preference number: 5 (lower is better)
Translates to: WYLTPHSFPGGRTMAYAGFISTH*VGISAG
Trigger: ACCTGCCGAGATGCCAACCAAATGTGTTGAGATGAA...CCCAGCATATGCCATTGTCCTTCCTCCTGGGAAGGAGTGCGGTGTCAAATACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CAA 90 bp AAGCCTGGACTCAATCAACTCCACCAGAACCTCTGGCCTTCCTGCAGGTGGAGGACAAAAACTGCCATGTaGCACAAGCTGTCAATTGCT +
Preference number: 5 (lower is better)
Translates to: KPGLNQLHQNLWPSCRWRTKTAM*HKLSIA
Trigger: AGCAATTGACAGCTTGTGCAACATGGCAGTTTTTGT...CCTCCACCTGCAGGAAGGCCAGAGGTTCTGGTGGAGTTGATTGAGTCCAGGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326715.4
CDS-3UTR CAA 90 bp GAGGAAGGACAATGGCATATGCTGGGCGCAATGCATTCACCACCGTTTTTACATACTGCCACTTCCCAGTaGGTTTCCCACCCACCAGAT +
Preference number: 5 (lower is better)
Translates to: EEGQWHMLGAMHSPPFLHTATSQ*VSHPPD
Trigger: ATCTGGTGGGTGGGAAACCAACTGGGAAGTGGCAGT...ATGTAAAAACGGTGGTGAATGCATTGCGCCCAGCATATGCCATTGTCCTTCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CAA 90 bp AGGTGGGTTACAATGTTCTTCATCACAGGTTGCTCCACCATGTCCTGGAAGACAACTGCCACTTCCCAGTaGGTTTCCCACCCACCAGAT +
Preference number: 5 (lower is better)
Translates to: RWVTMFFITGCSTMSWKTTATSQ*VSHPPD
Trigger: ATCTGGTGGGTGGGAAACCAACTGGGAAGTGGCAGT...TGTCTTCCAGGACATGGTGGAGCAACCTGTGATGAAGAACATTGTAACCCACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR CAA 90 bp CAGACAGGGTCGCACAAAGCTGTACTACAGGTGGGTCCATACCAGCCAGGTTTGTGGCAATTTTTGCCTTaGAGCTCAGGTGGACAATCA +
Preference number: 5 (lower is better)
Translates to: QTGSHKAVLQVGPYQPGLWQFLP*SSGGQS
Trigger: TGATTGTCCACCTGAGCTCAAAGGCAAAAATTGCCA...CAAACCTGGCTGGTATGGACCCACCTGTAGTACAGCTTTGTGCGACCCTGTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452576.6
CDS-3UTR CAA 90 bp ATAAGGACAAGTGCAGAGATTCCCAGCCAAGCATGTGCCACCATGTTGACAAGGCCTTTGCTCCTGCTGTaGGTTTTGCCTGGAATGCCT +
Preference number: 5 (lower is better)
Translates to: IRTSAEIPSQACATMLTRPLLLL*VLPGMP
Trigger: AGGCATTCCAGGCAAAACCAACAGCAGGAGCAAAGG...CCTTGTCAACATGGTGGCACATGCTTGGCTGGGAATCTCTGCACTTGTCCTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452576.6
CDS-3UTR CAA 90 bp ACACCGCACTCCTTCCCAGGAGGAAGGACAATGGCATATGCTGGGCGCAATGCATCACAGATGCCTTTTTaGGAATCTCCTACCAGTGTA +
Preference number: 5 (lower is better)
Translates to: TPHSFPGGRTMAYAGRNASQMPF*ESPTSV
Trigger: TACACTGGTAGGAGATTCCAAAAAAGGCATCTGTGA...TGCATTGCGCCCAGCATATGCCATTGTCCTTCCTCCTGGGAAGGAGTGCGGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614403.4
CDS-3UTR CAA 90 bp TTTGACTCCAGAGTATTCAGTGCGGCAGGAACACACATTGGGAAATATGCATCTTCAGTCTGTTGCTGCTaGGAACAGGGAAGCTCCGCG +
Preference number: 5 (lower is better)
Translates to: FDSRVFSAAGTHIGKYASSVCCC*EQGSSA
Trigger: CGCGGAGCTTCCCTGTTCCAAGCAGCAACAGACTGA...AGATGCATATTTCCCAATGTGTGTTCCTGCCGCACTGAATACTCTGGAGTCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CAA 90 bp CCCAGTTGGTTTCCCACCCACCAGATCCATGGTATCAAACTGCTGAACATCAGTCTCGGGCCTCCTTTCTaGGATTTTCTCAGTCTGTTG +
Preference number: 5 (lower is better)
Translates to: PSWFPTHQIHGIKLLNISLGPPF*DFLSLL
Trigger: CAACAGACTGAGAAAATCCAAGAAAGGAGGCCCGAG...ACTGATGTTCAGCAGTTTGATACCATGGATCTGGTGGGTGGGAAACCAACTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521169.5
CDS-3UTR CAA 90 bp CTACAGGTGGGTCCATACCAGCCAGGTTTGCACTGGCAAATATCTGGTGTAAGACTGAACTGTGGTCTCTaGTGTCAGCTCCTCTTTGAC +
Preference number: 5 (lower is better)
Translates to: LQVGPYQPGLHWQISGVRLNCGL*CQLLFD
Trigger: GTCAAAGAGGAGCTGACACAAGAGACCACAGTTCAG...TCTTACACCAGATATTTGCCAGTGCAAACCTGGCTGGTATGGACCCACCTGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR CAA 90 bp CAGGAGGAAGGACAATGGCATATGCTGGGCGCAATGCATTCACCACCGTTTTTACTGAACTGTGGTCTCTaGTGTCAGCTCCTCTTTGAC +
Preference number: 5 (lower is better)
Translates to: QEEGQWHMLGAMHSPPFLLNCGL*CQLLFD
Trigger: GTCAAAGAGGAGCTGACACAAGAGACCACAGTTCAG...TAAAAACGGTGGTGAATGCATTGCGCCCAGCATATGCCATTGTCCTTCCTCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CAA 90 bp TATTTGACACCGCACTCCTTCCCAGGAGGAAGGACAATGGCATATGCTGGGCGCCATCTGTTTTGTCGATaGTACCTCATTTCTTGGCTG +
Preference number: 5 (lower is better)
Translates to: YLTPHSFPGGRTMAYAGRHLFCR*YLISWL
Trigger: CAGCCAAGAAATGAGGTACAATCGACAAAACAGATG...GCGCCCAGCATATGCCATTGTCCTTCCTCCTGGGAAGGAGTGCGGTGTCAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CAA 90 bp TATTTGACACCGCACTCCTTCCCAGGAGGAAGGACAATGGCATATGCTGGGCGCCCGTTTCCATCTGTTTaGTCGATTGTACCTCATTTC +
Preference number: 5 (lower is better)
Translates to: YLTPHSFPGGRTMAYAGRPFPSV*SIVPHF
Trigger: GAAATGAGGTACAATCGACAAAACAGATGGAAACGG...GCGCCCAGCATATGCCATTGTCCTTCCTCCTGGGAAGGAGTGCGGTGTCAAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CAA 90 bp ATTTCTCATGCAGTGGCCACCATTCTTACAGGGAGGGTGACAGAAAGCATTCTGTTCTTCCAGATCCGTTaGGCTGAGACTCGGGAAAGC +
Preference number: 5 (lower is better)
Translates to: ISHAVATILTGRVTESILFFQIR*AETRES
Trigger: GCTTTCCCGAGTCTCAGCCAAACGGATCTGGAAGAA...CAGAATGCTTTCTGTCACCCTCCCTGTAAGAATGGTGGCCACTGCATGAGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR CAA 90 bp GAGGAAGGACAATGGCATATGCTGGGCGCAATGCATTCACCACCGTTTTTACATTTCTTCCAGATCCGTTaGGCTGAGACTCGGGAAAGC +
Preference number: 5 (lower is better)
Translates to: EEGQWHMLGAMHSPPFLHFFQIR*AETRES
Trigger: GCTTTCCCGAGTCTCAGCCAAACGGATCTGGAAGAA...ATGTAAAAACGGTGGTGAATGCATTGCGCCCAGCATATGCCATTGTCCTTCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CAA 90 bp AAATTGGTATTTGACACCGCACTCCTTCCCAGGAGGAAGGACAATGGCATATGCTTCTTCCAGATCCGTTaGGCTGAGACTCGGGAAAGC +
Preference number: 5 (lower is better)
Translates to: KLVFDTALLPRRKDNGICFFQIR*AETRES
Trigger: GCTTTCCCGAGTCTCAGCCAAACGGATCTGGAAGAA...GCATATGCCATTGTCCTTCCTCCTGGGAAGGAGTGCGGTGTCAAATACCAATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CAA 90 bp GAGGAAGGACAATGGCATATGCTGGGCGCAATGCATTCACCACCGTTTTTACATACCACAAGGGTTGGATaGGCACCCACTAATGTCCAC +
Preference number: 5 (lower is better)
Translates to: EEGQWHMLGAMHSPPFLHTTRVG*APTNVH
Trigger: GTGGACATTAGTGGGTGCCAATCCAACCCTTGTGGT...ATGTAAAAACGGTGGTGAATGCATTGCGCCCAGCATATGCCATTGTCCTTCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CAA 90 bp CAGTGTATCCTTCACGACAGACGCACACATTATTTCTCATGCAGTGGCCACCATCCAAGACCACAAGGGTaGGATTGGCACCCACTAATG +
Preference number: 5 (lower is better)
Translates to: QCILHDRRTHYFSCSGHHPRPQG*DWHPLM
Trigger: CATTAGTGGGTGCCAATCCAACCCTTGTGGTCTTGG...ATGGTGGCCACTGCATGAGAAATAATGTGTGCGTCTGTCGTGAAGGATACACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR CAA 90 bp TGGTATTTGACACCGCACTCCTTCCCAGGAGGAAGGACAATGGCATATGCTGGGCCCCAAAGAATCCATTaGGACAGAGGCAAGTATTTG +
Preference number: 5 (lower is better)
Translates to: WYLTPHSFPGGRTMAYAGPQRIH*DRGKYL
Trigger: CAAATACTTGCCTCTGTCCAAATGGATTCTTTGGGG...CCCAGCATATGCCATTGTCCTTCCTCCTGGGAAGGAGTGCGGTGTCAAATACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CAA 90 bp GGACAGAGGCAAGTATTTGGCTTATTACACGAACCACCATTGAGGCAGACAGGGGACAAGAGCAAGTGCTaGGTCCCACACATTTTCCTC +
Preference number: 5 (lower is better)
Translates to: GQRQVFGLLHEPPLRQTGDKSKC*VPHIFL
Trigger: GAGGAAAATGTGTGGGACCAAGCACTTGCTCTTGTC...CCCTGTCTGCCTCAATGGTGGTTCGTGTAATAAGCCAAATACTTGCCTCTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR CAA 90 bp ATTACACGAACCACCATTGAGGCAGACAGGGTCGCACAAAGCTGTACTACAGGTGACAAGAGCAAGTGCTaGGTCCCACACATTTTCCTC +
Preference number: 5 (lower is better)
Translates to: ITRTTIEADRVAQSCTTGDKSKC*VPHIFL
Trigger: GAGGAAAATGTGTGGGACCAAGCACTTGCTCTTGTC...ACCTGTAGTACAGCTTTGTGCGACCCTGTCTGCCTCAATGGTGGTTCGTGTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR CAA 90 bp CCAGGAGGAAGGACAATGGCATATGCTGGGCGCAATGCATTCACCACCGTTTTTTCTTCCTGGCAATTTTaGCCTTTGAGCTCAGGTGGA +
Preference number: 5 (lower is better)
Translates to: PGGRTMAYAGRNAFTTVFSSWQF*PLSSGG
Trigger: TCCACCTGAGCTCAAAGGCAAAAATTGCCAGGAAGA...AAAAACGGTGGTGAATGCATTGCGCCCAGCATATGCCATTGTCCTTCCTCCTGG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000452576.6
CDS-3UTR CAA 90 bp AACACCTACAGAAAAGCCTGGACTCAATCAACTCCACCAGAACCTCTGGCCTTCTTCATCTCAACACATTaGGTTGGCATCTCGGCAGGT +
Preference number: 5 (lower is better)
Translates to: NTYRKAWTQSTPPEPLAFFISTH*VGISAG
Trigger: ACCTGCCGAGATGCCAACCAAATGTGTTGAGATGAA...GAAGGCCAGAGGTTCTGGTGGAGTTGATTGAGTCCAGGCTTTTCTGTAGGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326715.4
CDS-3UTR CAA 90 bp CTTCTCACATTTGACTCCAGAGTATTCAGTGCGGCAGGAACACACATTGGGAAACAAGCTGTCAATTGCTaGATCTCCCCAGGAGATGGC +
Preference number: 5 (lower is better)
Translates to: LLTFDSRVFSAAGTHIGKQAVNC*ISPGDG
Trigger: GCCATCTCCTGGGGAGATCAAGCAATTGACAGCTTG...TTTCCCAATGTGTGTTCCTGCCGCACTGAATACTCTGGAGTCAAATGTGAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CAA 90 bp GGACAATGGCATATGCTGGGCGCAATGCATTCACCACCGTTTTTACATTTCTGCCTGAACTGTGGTCTCTaGTGTCAGCTCCTCTTTGAC +
Preference number: 5 (lower is better)
Translates to: GQWHMLGAMHSPPFLHFCLNCGL*CQLLFD
Trigger: GTCAAAGAGGAGCTGACACAAGAGACCACAGTTCAG...GCAGAAATGTAAAAACGGTGGTGAATGCATTGCGCCCAGCATATGCCATTGTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CAA 90 bp TCTCATGCAGTGGCCACCATTCTTACAGGGAGGGTGACAGAAAGCATTCTGACAGGGACATCCTTTACTTaGATCTGGATGCTGTCTGGA +
Preference number: 5 (lower is better)
Translates to: SHAVATILTGRVTESILTGTSFT*IWMLSG
Trigger: TCCAGACAGCATCCAGATCAAAGTAAAGGATGTCCC...TGTCAGAATGCTTTCTGTCACCCTCCCTGTAAGAATGGTGGCCACTGCATGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452576.6
CDS-3UTR CAA 90 bp TATTTGACACCGCACTCCTTCCCAGGAGGAAGGACAATGGCATATGCTGGGCGCAGAGAATGTCTTCAATaGATGTGCCATACTCTTCTG +
Preference number: 5 (lower is better)
Translates to: YLTPHSFPGGRTMAYAGRRECLQ*MCHTLL
Trigger: CAGAAGAGTATGGCACATCAATTGAAGACATTCTCT...GCGCCCAGCATATGCCATTGTCCTTCCTCCTGGGAAGGAGTGCGGTGTCAAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CAA 90 bp AGACAGGGTCGCACAAAGCTGTACTACAGGTGGGTCCATACCAGCCAGGTTTGCAATTCTTTGAAGCCTTaGCCAAAAACTCTCACCATC +
Preference number: 5 (lower is better)
Translates to: RQGRTKLYYRWVHTSQVCNSLKP*PKTLTI
Trigger: GATGGTGAGAGTTTTTGGCAAAGGCTTCAAAGAATT...GCAAACCTGGCTGGTATGGACCCACCTGTAGTACAGCTTTGTGCGACCCTGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR CAA 90 bp TTTGACTCCAGAGTATTCAGTGCGGCAGGAACACACATTGGGAAATATGCATCTACTGCCACTTCCCAGTaGGTTTCCCACCCACCAGAT +
Preference number: 5 (lower is better)
Translates to: FDSRVFSAAGTHIGKYASTATSQ*VSHPPD
Trigger: ATCTGGTGGGTGGGAAACCAACTGGGAAGTGGCAGT...AGATGCATATTTCCCAATGTGTGTTCCTGCCGCACTGAATACTCTGGAGTCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CAA 90 bp ATTATTTCTCATGCAGTGGCCACCATTCTTACAGGGAGGGTGACAGAAAGCATTCTGCAGAGGAAACACTaGCCCCTTCAGGACCAGAGT +
Preference number: 5 (lower is better)
Translates to: IISHAVATILTGRVTESILQRKH*PLQDQS
Trigger: ACTCTGGTCCTGAAGGGGCAAGTGTTTCCTCTGCAG...AATGCTTTCTGTCACCCTCCCTGTAAGAATGGTGGCCACTGCATGAGAAATAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR CAA 90 bp GCATCTGCCTCCATAAAGACATTTTGGGTTGCAAATTGGTATTTGACACCGCACTTACACGAACCACCATaGAGGCAGACAGGGTCGCAC +
Preference number: 5 (lower is better)
Translates to: ASASIKTFWVANWYLTPHLHEPP*RQTGSH
Trigger: GTGCGACCCTGTCTGCCTCAATGGTGGTTCGTGTAA...GTGCGGTGTCAAATACCAATTTGCAACCCAAAATGTCTTTATGGAGGCAGATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CAA 90 bp TTACATTTCTGCAAGCAGATAGGTGTGTTGCATCGTTTCCCACTCCAACCAGAATTACACGAACCACCATaGAGGCAGACAGGGTCGCAC +
Preference number: 5 (lower is better)
Translates to: LHFCKQIGVLHRFPLQPELHEPP*RQTGSH
Trigger: GTGCGACCCTGTCTGCCTCAATGGTGGTTCGTGTAA...TTCTGGTTGGAGTGGGAAACGATGCAACACACCTATCTGCTTGCAGAAATGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CAA 90 bp ATAAGGACAAGTGCAGAGATTCCCAGCCAAGCATGTGCCACCATGTTGACAAGGAAGCAGATAGGTGTGTaGCATCGTTTCCCACTCCAA +
Preference number: 5 (lower is better)
Translates to: IRTSAEIPSQACATMLTRKQIGV*HRFPLQ
Trigger: TTGGAGTGGGAAACGATGCAACACACCTATCTGCTT...CCTTGTCAACATGGTGGCACATGCTTGGCTGGGAATCTCTGCACTTGTCCTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR CAA 90 bp TGGTATTTGACACCGCACTCCTTCCCAGGAGGAAGGACAATGGCATATGCTGGGATTTTGGGTTGCAAATaGGTATTTGACACCGCACTC +
Preference number: 5 (lower is better)
Translates to: WYLTPHSFPGGRTMAYAGILGCK*VFDTAL
Trigger: GAGTGCGGTGTCAAATACCAATTTGCAACCCAAAAT...CCCAGCATATGCCATTGTCCTTCCTCCTGGGAAGGAGTGCGGTGTCAAATACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CAA 90 bp AATTGGTATTTGACACCGCACTCCTTCCCAGGAGGAAGGACAATGGCATATGCTCGGCAGGAACACACATaGGGAAATATGCATCTGCCT +
Preference number: 5 (lower is better)
Translates to: NWYLTPHSFPGGRTMAYARQEHT*GNMHLP
Trigger: AGGCAGATGCATATTTCCCAATGTGTGTTCCTGCCG...AGCATATGCCATTGTCCTTCCTCCTGGGAAGGAGTGCGGTGTCAAATACCAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CAA 90 bp AAGCCTGGACTCAATCAACTCCACCAGAACCTCTGGCCTTCCTGCAGGTGGAGGAAGAAGAAATGTGAATaGCTTTGGCAATCGTCAGTT +
Preference number: 5 (lower is better)
Translates to: KPGLNQLHQNLWPSCRWRKKKCE*LWQSSV
Trigger: AACTGACGATTGCCAAAGCAATTCACATTTCTTCTT...CCTCCACCTGCAGGAAGGCCAGAGGTTCTGGTGGAGTTGATTGAGTCCAGGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326715.4
CDS TCA 90 bp AATCTATACCATCCAGGGGAGAGGGAATGGTCACATATTAGGTCTTaGACAGCTGACTGCTGGAGGTGCCATGAGTCAAAACGGACACTT +
Preference number: 5 (lower is better)
Translates to: NLYHPGEREWSHIRS*TADCWRCHESKRTL
Trigger: AAGTGTCCGTTTTGACTCATGGCACCTCCAGCAGTCAGCTGTTCAAGACCTAATATGTGACCATTCCCTCTCCCCTGGATGGTATAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000275358.8
ENST00000326715.4
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CAA 90 bp GACAATGGCATATGCTGGGCGCAATGCATTCACCACCGTTTTTACATTTCTGCATCTCAACACATTTGGTaGGCATCTCGGCAGGTCTGT +
Preference number: 5 (lower is better)
Translates to: DNGICWAQCIHHRFYISASQHIW*ASRQVC
Trigger: ACAGACCTGCCGAGATGCCAACCAAATGTGTTGAGA...TGCAGAAATGTAAAAACGGTGGTGAATGCATTGCGCCCAGCATATGCCATTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CAA 90 bp CTTCTCACATTTGACTCCAGAGTATTCAGTGCGGCAGGAACACACATTGGGAAATCTCAACACATTTGGTaGGCATCTCGGCAGGTCTGT +
Preference number: 5 (lower is better)
Translates to: LLTFDSRVFSAAGTHIGKSQHIW*ASRQVC
Trigger: ACAGACCTGCCGAGATGCCAACCAAATGTGTTGAGA...TTTCCCAATGTGTGTTCCTGCCGCACTGAATACTCTGGAGTCAAATGTGAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CAA 90 bp AGAGAATGCCTGAACTGTGGTCTCTTGTGTCAGCTCCTCTTTGACTTCTTGAGACTGAACTGTGGTCTCTaGTGTCAGCTCCTCTTTGAC +
Preference number: 5 (lower is better)
Translates to: RECLNCGLLCQLLFDFLRLNCGL*CQLLFD
Trigger: GTCAAAGAGGAGCTGACACAAGAGACCACAGTTCAG...TCTCAAGAAGTCAAAGAGGAGCTGACACAAGAGACCACAGTTCAGGCATTCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326715.4
CDS-3UTR CAA 90 bp TGCTCCACCATGTCCTGGAAGACACTGACAAATGTTAGGCTTAATACATTTTCCTCCATGCACTGCCCATaGCCGCTGCATAAATTGGGG +
Preference number: 5 (lower is better)
Translates to: CSTMSWKTLTNVRLNTFSSMHCP*PLHKLG
Trigger: CCCCAATTTATGCAGCGGCAATGGGCAGTGCATGGA...GGAAAATGTATTAAGCCTAACATTTGTCAGTGTCTTCCAGGACATGGTGGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR CAA 90 bp TGCCTCCATAAAGACATTTTGGGTTGCAAATTGGTATTTGACACCGCACTCCTTTCCATGCACTGCCCATaGCCGCTGCATAAATTGGGG +
Preference number: 5 (lower is better)
Translates to: CLHKDILGCKLVFDTALLSMHCP*PLHKLG
Trigger: CCCCAATTTATGCAGCGGCAATGGGCAGTGCATGGA...AAGGAGTGCGGTGTCAAATACCAATTTGCAACCCAAAATGTCTTTATGGAGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CAA 90 bp ATGGTGAAGGCATTTCCACTTGTTGGCTTAACATGCCTCTTTCTCCCTTGGGCATTTGTCTTGCAATGCTaGAATCACTGGGGGCTGGTT +
Preference number: 5 (lower is better)
Translates to: MVKAFPLVGLTCLFLPWAFVLQC*NHWGLV
Trigger: AACCAGCCCCCAGTGATTCAAGCATTGCAAGACAAA...TGCCCAAGGGAGAAAGAGGCATGTTAAGCCAACAAGTGGAAATGCCTTCACCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR CAA 90 bp TGCTCCACCATGTCCTGGAAGACACTGACAAATGTTAGGCTTAATACATTTTCCCTGCAGAGGAAACACTaGCCCCTTCAGGACCAGAGT +
Preference number: 5 (lower is better)
Translates to: CSTMSWKTLTNVRLNTFSLQRKH*PLQDQS
Trigger: ACTCTGGTCCTGAAGGGGCAAGTGTTTCCTCTGCAG...GGAAAATGTATTAAGCCTAACATTTGTCAGTGTCTTCCAGGACATGGTGGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR CAA 90 bp TTCATCAAAGGTTCCACAAAGTCCCAGAGTGTTTCTGTAATCTACACTAGGGGCACCACAAGGGTTGGATaGGCACCCACTAATGTCCAC +
Preference number: 5 (lower is better)
Translates to: FIKGSTKSQSVSVIYTRGTTRVG*APTNVH
Trigger: GTGGACATTAGTGGGTGCCAATCCAACCCTTGTGGT...GCCCCTAGTGTAGATTACAGAAACACTCTGGGACTTTGTGGAACCTTTGATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521169.5
CDS-3UTR CAA 90 bp GAAGGACAATGGCATATGCTGGGCGCAATGCATTCACCACCGTTTTTACATTTCGTTCTTCATCACAGGTaGCTCCACCATGTCCTGGAA +
Preference number: 5 (lower is better)
Translates to: EGQWHMLGAMHSPPFLHFVLHHR*LHHVLE
Trigger: TTCCAGGACATGGTGGAGCAACCTGTGATGAAGAAC...GAAATGTAAAAACGGTGGTGAATGCATTGCGCCCAGCATATGCCATTGTCCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CAA 90 bp GAGGAAGGACAATGGCATATGCTGGGCGCAATGCATTCACCACCGTTTTTACATGTTGCAAATTGGTATTaGACACCGCACTCCTTCCCA +
Preference number: 5 (lower is better)
Translates to: EEGQWHMLGAMHSPPFLHVANWY*TPHSFP
Trigger: TGGGAAGGAGTGCGGTGTCAAATACCAATTTGCAAC...ATGTAAAAACGGTGGTGAATGCATTGCGCCCAGCATATGCCATTGTCCTTCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CAA 90 bp TGTGGTCTCTTGTGTCAGCTCCTCTTTGACTTCTTGAGAAGAAAGCCTAGACCAGGGGACTTTACAATCTaGGCAAAGAACCCTTCCGCA +
Preference number: 5 (lower is better)
Translates to: CGLLCQLLFDFLRRKPRPGDFTI*AKNPSA
Trigger: TGCGGAAGGGTTCTTTGCCAAGATTGTAAAGTCCCC...TGGTCTAGGCTTTCTTCTCAAGAAGTCAAAGAGGAGCTGACACAAGAGACCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326715.4
CDS-3UTR CAA 90 bp ATGGCATATGCTGGGCGCAATGCATTCACCACCGTTTTTACATTTCTGCAAGCACTCCTGCTGTTGGTTTaGCCTGGAATGCCTTTCTCT +
Preference number: 5 (lower is better)
Translates to: MAYAGRNAFTTVFTFLQALLLLV*PGMPFS
Trigger: AGAGAAAGGCATTCCAGGCAAAACCAACAGCAGGAG...TGCTTGCAGAAATGTAAAAACGGTGGTGAATGCATTGCGCCCAGCATATGCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452576.6
CDS TCA 90 bp AGTAACTATATCACCTCCTTCCTGGGCAACAAACCCACAATTACATaGCACTGGATAGTGAAGGCTTCTGCAGTCCCACTGACGTACATG +
Preference number: 5 (lower is better)
Translates to: SNYITSFLGNKPTIT*HWIVKASAVPLTYM
Trigger: CATGTACGTCAGTGGGACTGCAGAAGCCTTCACTATCCAGTGTCATGTAATTGTGGGTTTGTTGCCCAGGAAGGAGGTGATATAGTTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275358.8
ENST00000452576.6
CDS GCA 90 bp GGGCAACAAACCCACAATTACATGACACTGGATAGTGAAGGCTTCTaGAGTCCCACTGACGTACATGGACTTCAAAATCACGTGACATAC +
Preference number: 5 (lower is better)
Translates to: GQQTHNYMTLDSEGF*SPTDVHGLQNHVTY
Trigger: GTATGTCACGTGATTTTGAAGTCCATGTACGTCAGTGGGACTGCAGAAGCCTTCACTATCCAGTGTCATGTAATTGTGGGTTTGTTGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275358.8
ENST00000452576.6
CDS-3UTR CAA 90 bp CTGTGTTTCAACTCTCTAGCTCCAACTCTTGTAGCAGCTCCCCTTTCTTCCTATGATTTTCTCAGTCTGTaGCTGCTTGGAACAGGGAAG +
Preference number: 5 (lower is better)
Translates to: LCFNSLAPTLVAAPLSSYDFLSL*LLGTGK
Trigger: CTTCCCTGTTCCAAGCAGCAACAGACTGAGAAAATC...ATAGGAAGAAAGGGGAGCTGCTACAAGAGTTGGAGCTAGAGAGTTGAAACACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452576.6
CDS-3UTR CAA 90 bp GAAGGACAATGGCATATGCTGGGCGCAATGCATTCACCACCGTTTTTACATTTCGATTTTCTCAGTCTGTaGCTGCTTGGAACAGGGAAG +
Preference number: 5 (lower is better)
Translates to: EGQWHMLGAMHSPPFLHFDFLSL*LLGTGK
Trigger: CTTCCCTGTTCCAAGCAGCAACAGACTGAGAAAATC...GAAATGTAAAAACGGTGGTGAATGCATTGCGCCCAGCATATGCCATTGTCCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CAA 90 bp GCCTCCATAAAGACATTTTGGGTTGCAAATTGGTATTTGACACCGCACTCCTTCCTCGGGCCTCCTTTCTaGGATTTTCTCAGTCTGTTG +
Preference number: 5 (lower is better)
Translates to: ASIKTFWVANWYLTPHSFLGPPF*DFLSLL
Trigger: CAACAGACTGAGAAAATCCAAGAAAGGAGGCCCGAG...GAAGGAGTGCGGTGTCAAATACCAATTTGCAACCCAAAATGTCTTTATGGAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CAA 90 bp AGGAAGGACAATGGCATATGCTGGGCGCAATGCATTCACCACCGTTTTTACATTTTCATCTCAACACATTaGGTTGGCATCTCGGCAGGT +
Preference number: 5 (lower is better)
Translates to: RKDNGICWAQCIHHRFYIFISTH*VGISAG
Trigger: ACCTGCCGAGATGCCAACCAAATGTGTTGAGATGAA...AATGTAAAAACGGTGGTGAATGCATTGCGCCCAGCATATGCCATTGTCCTTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CAA 90 bp TGGCGTCTTATCTGTATTTTCTTCTCACATTTGACTCCAGAGTATTCAGTGCGGCAAGCTGTCAATTGCTaGATCTCCCCAGGAGATGGC +
Preference number: 5 (lower is better)
Translates to: WRLICIFFSHLTPEYSVRQAVNC*ISPGDG
Trigger: GCCATCTCCTGGGGAGATCAAGCAATTGACAGCTTG...CCGCACTGAATACTCTGGAGTCAAATGTGAGAAGAAAATACAGATAAGACGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CAA 90 bp TCAGATACACATGATCCACCATTCAAGCAATCACAAGACTTCACAGTCACCTCACAAGCTGTCAATTGCTaGATCTCCCCAGGAGATGGC +
Preference number: 5 (lower is better)
Translates to: SDTHDPPFKQSQDFTVTSQAVNC*ISPGDG
Trigger: GCCATCTCCTGGGGAGATCAAGCAATTGACAGCTTG...TGAGGTGACTGTGAAGTCTTGTGATTGCTTGAATGGTGGATCATGTGTATCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521169.5
CDS-3UTR CAA 90 bp CAAGTTCTAAAAGAGAGAATGCCTGAACTGTGGTCTCTTGTGTCAGCTCCTCTTTGCACAAGCTGTCAATaGCTTGATCTCCCCAGGAGA +
Preference number: 5 (lower is better)
Translates to: QVLKERMPELWSLVSAPLCTSCQ*LDLPRR
Trigger: TCTCCTGGGGAGATCAAGCAATTGACAGCTTGTGCA...AAGAGGAGCTGACACAAGAGACCACAGTTCAGGCATTCTCTCTTTTAGAACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326715.4
CDS-3UTR CAA 90 bp TTTGACTCCAGAGTATTCAGTGCGGCAGGAACACACATTGGGAAATATGCATCTTGCACAAGCTGTCAATaGCTTGATCTCCCCAGGAGA +
Preference number: 5 (lower is better)
Translates to: FDSRVFSAAGTHIGKYASCTSCQ*LDLPRR
Trigger: TCTCCTGGGGAGATCAAGCAATTGACAGCTTGTGCA...AGATGCATATTTCCCAATGTGTGTTCCTGCCGCACTGAATACTCTGGAGTCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CAA 90 bp GCAGATAGGTGTGTTGCATCGTTTCCCACTCCAACCAGAAGGACAAGAGCAAGTCCATACATCCCTGAGTaGGTTGTAGTAAGTATACAG +
Preference number: 5 (lower is better)
Translates to: ADRCVASFPTPTRRTRASPYIPE*VVVSIQ
Trigger: CTGTATACTTACTACAACCAACTCAGGGATGTATGG...ACTTGCTCTTGTCCTTCTGGTTGGAGTGGGAAACGATGCAACACACCTATCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CAA 90 bp ACATTTCTGCAAGCAGATAGGTGTGTTGCATCGTTTCCCACTCCAACCAGAAGGCTCCTCTTTGACTTCTaGAGAAGAAAGCCTAGACCA +
Preference number: 5 (lower is better)
Translates to: TFLQADRCVASFPTPTRRLLFDF*RRKPRP
Trigger: TGGTCTAGGCTTTCTTCTCAAGAAGTCAAAGAGGAG...CCTTCTGGTTGGAGTGGGAAACGATGCAACACACCTATCTGCTTGCAGAAATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CAA 90 bp GGACAGAGGCAAGTATTTGGCTTATTACACGAACCACCATTGAGGCAGACAGGGTTCGATGGCTACACTTaGTACATGAGGATTCTCCAA +
Preference number: 5 (lower is better)
Translates to: GQRQVFGLLHEPPLRQTGFDGYT*YMRILQ
Trigger: TTGGAGAATCCTCATGTACAAAGTGTAGCCATCGAA...CCCTGTCTGCCTCAATGGTGGTTCGTGTAATAAGCCAAATACTTGCCTCTGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR CAA 90 bp GGACAGAGGCAAGTATTTGGCTTATTACACGAACCACCATTGAGGCAGACAGGGCATCTGTTTTGTCGATaGTACCTCATTTCTTGGCTG +
Preference number: 5 (lower is better)
Translates to: GQRQVFGLLHEPPLRQTGHLFCR*YLISWL
Trigger: CAGCCAAGAAATGAGGTACAATCGACAAAACAGATG...CCCTGTCTGCCTCAATGGTGGTTCGTGTAATAAGCCAAATACTTGCCTCTGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR CAA 90 bp ATTACACGAACCACCATTGAGGCAGACAGGGTCGCACAAAGCTGTACTACAGGTCCGTTTCCATCTGTTTaGTCGATTGTACCTCATTTC +
Preference number: 5 (lower is better)
Translates to: ITRTTIEADRVAQSCTTGPFPSV*SIVPHF
Trigger: GAAATGAGGTACAATCGACAAAACAGATGGAAACGG...ACCTGTAGTACAGCTTTGTGCGACCCTGTCTGCCTCAATGGTGGTTCGTGTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR CAA 90 bp GCCTCCATAAAGACATTTTGGGTTGCAAATTGGTATTTGACACCGCACTCCTTCGTTCTTCATCACAGGTaGCTCCACCATGTCCTGGAA +
Preference number: 5 (lower is better)
Translates to: ASIKTFWVANWYLTPHSFVLHHR*LHHVLE
Trigger: TTCCAGGACATGGTGGAGCAACCTGTGATGAAGAAC...GAAGGAGTGCGGTGTCAAATACCAATTTGCAACCCAAAATGTCTTTATGGAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CAA 90 bp ATTATTTCTCATGCAGTGGCCACCATTCTTACAGGGAGGGTGACAGAAAGCATTGCATGTGCCACCATGTaGACAAGGTGGGTTACAATG +
Preference number: 5 (lower is better)
Translates to: IISHAVATILTGRVTESIACATM*TRWVTM
Trigger: CATTGTAACCCACCTTGTCAACATGGTGGCACATGC...AATGCTTTCTGTCACCCTCCCTGTAAGAATGGTGGCCACTGCATGAGAAATAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR CAA 90 bp GGACAATGGCATATGCTGGGCGCAATGCATTCACCACCGTTTTTACATTTCTGCGCCTGTTACAAACCATaGTTTCACACCTTGGTCCTA +
Preference number: 5 (lower is better)
Translates to: GQWHMLGAMHSPPFLHFCACYKP*FHTLVL
Trigger: TAGGACCAAGGTGTGAAACAATGGTTTGTAACAGGC...GCAGAAATGTAAAAACGGTGGTGAATGCATTGCGCCCAGCATATGCCATTGTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CAA 90 bp TTACATTTCTGCAAGCAGATAGGTGTGTTGCATCGTTTCCCACTCCAACCAGAACCATACCAGCCAGGTTaGCACTGGCAAATATCTGGT +
Preference number: 5 (lower is better)
Translates to: LHFCKQIGVLHRFPLQPEPYQPG*HWQISG
Trigger: ACCAGATATTTGCCAGTGCAAACCTGGCTGGTATGG...TTCTGGTTGGAGTGGGAAACGATGCAACACACCTATCTGCTTGCAGAAATGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CAA 90 bp AGGTGGGTTACAATGTTCTTCATCACAGGTTGCTCCACCATGTCCTGGAAGACAGACAGAGGCAAGTATTaGGCTTATTACACGAACCAC +
Preference number: 5 (lower is better)
Translates to: RWVTMFFITGCSTMSWKTDRGKY*AYYTNH
Trigger: GTGGTTCGTGTAATAAGCCAAATACTTGCCTCTGTC...TGTCTTCCAGGACATGGTGGAGCAACCTGTGATGAAGAACATTGTAACCCACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR CAA 90 bp ACATTTCTGCAAGCAGATAGGTGTGTTGCATCGTTTCCCACTCCAACCAGAAGGCCCCAAAGAATCCATTaGGACAGAGGCAAGTATTTG +
Preference number: 5 (lower is better)
Translates to: TFLQADRCVASFPTPTRRPQRIH*DRGKYL
Trigger: CAAATACTTGCCTCTGTCCAAATGGATTCTTTGGGG...CCTTCTGGTTGGAGTGGGAAACGATGCAACACACCTATCTGCTTGCAGAAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS TCA 90 bp TCATCTCAACACATTTGGTTGGCATCTCGGCAGGTCTGTCAAGGATaGGAAATCTATACCATCCAGGGGAGAGGGAATGGTCACATATTA +
Preference number: 5 (lower is better)
Translates to: SSQHIWLASRQVCQG*EIYTIQGRGNGHIL
Trigger: TAATATGTGACCATTCCCTCTCCCCTGGATGGTATAGATTTCTCATCCTTGACAGACCTGCCGAGATGCCAACCAAATGTGTTGAGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000275358.8
ENST00000326715.4
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CAA 90 bp GAGGAAGGACAATGGCATATGCTGGGCGCAATGCATTCACCACCGTTTTTACATACAAAAACTGCCATGTaGCACAAGCTGTCAATTGCT +
Preference number: 5 (lower is better)
Translates to: EEGQWHMLGAMHSPPFLHTKTAM*HKLSIA
Trigger: AGCAATTGACAGCTTGTGCAACATGGCAGTTTTTGT...ATGTAAAAACGGTGGTGAATGCATTGCGCCCAGCATATGCCATTGTCCTTCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CAA 90 bp AGGTGGGTTACAATGTTCTTCATCACAGGTTGCTCCACCATGTCCTGGAAGACATTCGATGGCTACACTTaGTACATGAGGATTCTCCAA +
Preference number: 5 (lower is better)
Translates to: RWVTMFFITGCSTMSWKTFDGYT*YMRILQ
Trigger: TTGGAGAATCCTCATGTACAAAGTGTAGCCATCGAA...TGTCTTCCAGGACATGGTGGAGCAACCTGTGATGAAGAACATTGTAACCCACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR CAA 90 bp GAGGAAGGACAATGGCATATGCTGGGCGCAATGCATTCACCACCGTTTTTACATCCGTTTCCATCTGTTTaGTCGATTGTACCTCATTTC +
Preference number: 5 (lower is better)
Translates to: EEGQWHMLGAMHSPPFLHPFPSV*SIVPHF
Trigger: GAAATGAGGTACAATCGACAAAACAGATGGAAACGG...ATGTAAAAACGGTGGTGAATGCATTGCGCCCAGCATATGCCATTGTCCTTCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CAA 90 bp CTACAGGTGGGTCCATACCAGCCAGGTTTGCACTGGCAAATATCTGGTGTAAGAAGAGAATGTCTTCAATaGATGTGCCATACTCTTCTG +
Preference number: 5 (lower is better)
Translates to: LQVGPYQPGLHWQISGVRRECLQ*MCHTLL
Trigger: CAGAAGAGTATGGCACATCAATTGAAGACATTCTCT...TCTTACACCAGATATTTGCCAGTGCAAACCTGGCTGGTATGGACCCACCTGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR CAA 90 bp ATAAGGACAAGTGCAGAGATTCCCAGCCAAGCATGTGCCACCATGTTGACAAGGATAGAGACCACAAACTaGGCAAGCACCATCATATAT +
Preference number: 5 (lower is better)
Translates to: IRTSAEIPSQACATMLTRIETTN*ASTIIY
Trigger: ATATATGATGGTGCTTGCCAAGTTTGTGGTCTCTAT...CCTTGTCAACATGGTGGCACATGCTTGGCTGGGAATCTCTGCACTTGTCCTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR CAA 90 bp ACATTTCTGCAAGCAGATAGGTGTGTTGCATCGTTTCCCACTCCAACCAGAAGGAACTGTGTTTCAACTTaGAGCTCAGGTGGACAATCA +
Preference number: 5 (lower is better)
Translates to: TFLQADRCVASFPTPTRRNCVST*SSGGQS
Trigger: TGATTGTCCACCTGAGCTCAAAGTTGAAACACAGTT...CCTTCTGGTTGGAGTGGGAAACGATGCAACACACCTATCTGCTTGCAGAAATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CAA 90 bp TTACATTTCTGCAAGCAGATAGGTGTGTTGCATCGTTTCCCACTCCAACCAGAATACATTTGCAGATGTTaGGGGCAACACACTCCCTAC +
Preference number: 5 (lower is better)
Translates to: LHFCKQIGVLHRFPLQPEYICRC*GQHTPY
Trigger: GTAGGGAGTGTGTTGCCCCAAACATCTGCAAATGTA...TTCTGGTTGGAGTGGGAAACGATGCAACACACCTATCTGCTTGCAGAAATGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CAA 90 bp CACATTATTTCTCATGCAGTGGCCACCATTCTTACAGGGAGGGTGACAGAAAGCGTCACAAAGAGCAGTTaGGCAGTTAGAACCAATGTA +
Preference number: 5 (lower is better)
Translates to: HIISHAVATILTGRVTESVTKSS*AVRTNV
Trigger: TACATTGGTTCTAACTGCCAAACTGCTCTTTGTGAC...GCTTTCTGTCACCCTCCCTGTAAGAATGGTGGCCACTGCATGAGAAATAATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR CAA 90 bp GGACAATGGCATATGCTGGGCGCAATGCATTCACCACCGTTTTTACATTTCTGCGTCACAAAGAGCAGTTaGGCAGTTAGAACCAATGTA +
Preference number: 5 (lower is better)
Translates to: GQWHMLGAMHSPPFLHFCVTKSS*AVRTNV
Trigger: TACATTGGTTCTAACTGCCAAACTGCTCTTTGTGAC...GCAGAAATGTAAAAACGGTGGTGAATGCATTGCGCCCAGCATATGCCATTGTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CAA 90 bp TGGCGTCTTATCTGTATTTTCTTCTCACATTTGACTCCAGAGTATTCAGTGCGGGTTCTTCATCACAGGTaGCTCCACCATGTCCTGGAA +
Preference number: 5 (lower is better)
Translates to: WRLICIFFSHLTPEYSVRVLHHR*LHHVLE
Trigger: TTCCAGGACATGGTGGAGCAACCTGTGATGAAGAAC...CCGCACTGAATACTCTGGAGTCAAATGTGAGAAGAAAATACAGATAAGACGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CAA 90 bp TGCCTCCATAAAGACATTTTGGGTTGCAAATTGGTATTTGACACCGCACTCCTTGCATGTGCCACCATGTaGACAAGGTGGGTTACAATG +
Preference number: 5 (lower is better)
Translates to: CLHKDILGCKLVFDTALLACATM*TRWVTM
Trigger: CATTGTAACCCACCTTGTCAACATGGTGGCACATGC...AAGGAGTGCGGTGTCAAATACCAATTTGCAACCCAAAATGTCTTTATGGAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CAA 90 bp ATGGTGAAGGCATTTCCACTTGTTGGCTTAACATGCCTCTTTCTCCCTTGGGCACCATTGTTTCACACCTaGGTCCTACAAAACCATAAG +
Preference number: 5 (lower is better)
Translates to: MVKAFPLVGLTCLFLPWAPLFHT*VLQNHK
Trigger: CTTATGGTTTTGTAGGACCAAGGTGTGAAACAATGG...TGCCCAAGGGAGAAAGAGGCATGTTAAGCCAACAAGTGGAAATGCCTTCACCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR CAA 90 bp AGGAAGGACAATGGCATATGCTGGGCGCAATGCATTCACCACCGTTTTTACATTGCCTGTTACAAACCATaGTTTCACACCTTGGTCCTA +
Preference number: 5 (lower is better)
Translates to: RKDNGICWAQCIHHRFYIACYKP*FHTLVL
Trigger: TAGGACCAAGGTGTGAAACAATGGTTTGTAACAGGC...AATGTAAAAACGGTGGTGAATGCATTGCGCCCAGCATATGCCATTGTCCTTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CAA 90 bp ATGGCATATGCTGGGCGCAATGCATTCACCACCGTTTTTACATTTCTGCAAGCAGACAGAGGCAAGTATTaGGCTTATTACACGAACCAC +
Preference number: 5 (lower is better)
Translates to: MAYAGRNAFTTVFTFLQADRGKY*AYYTNH
Trigger: GTGGTTCGTGTAATAAGCCAAATACTTGCCTCTGTC...TGCTTGCAGAAATGTAAAAACGGTGGTGAATGCATTGCGCCCAGCATATGCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CAA 90 bp ATAAGGACAAGTGCAGAGATTCCCAGCCAAGCATGTGCCACCATGTTGACAAGGATCACAGATGCTTTTTaGGAATCTCCTACCAGTGTA +
Preference number: 5 (lower is better)
Translates to: IRTSAEIPSQACATMLTRITDAF*ESPTSV
Trigger: TACACTGGTAGGAGATTCCAAAAAAGCATCTGTGAT...CCTTGTCAACATGGTGGCACATGCTTGGCTGGGAATCTCTGCACTTGTCCTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR CAA 90 bp TGCCTCCATAAAGACATTTTGGGTTGCAAATTGGTATTTGACACCGCACTCCTTGACAAGAGCAAGTGCTaGGTCCCACACATTTTCCTC +
Preference number: 5 (lower is better)
Translates to: CLHKDILGCKLVFDTALLDKSKC*VPHIFL
Trigger: GAGGAAAATGTGTGGGACCAAGCACTTGCTCTTGTC...AAGGAGTGCGGTGTCAAATACCAATTTGCAACCCAAAATGTCTTTATGGAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CAA 90 bp AACAGCTCTGCTATTGTGGAAAACAGTCTGTGTATAGATGGGTTCTCCAGGCATAAGCAGATAGGTGTGTaGCATCGTTTCCCACTCCAA +
Preference number: 5 (lower is better)
Translates to: NSSAIVENSLCIDGFSRHKQIGV*HRFPLQ
Trigger: TTGGAGTGGGAAACGATGCAACACACCTATCTGCTT...ATGCCTGGAGAACCCATCTATACACAGACTGTTTTCCACAATAGCAGAGCTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521169.5
CDS-3UTR CAA 90 bp ATCTCCTACCAGTGTATCCTTCACGACAGACGCACACATTATTTCTCATGCAGTGTTGCAAATTGGTATTaGACACCGCACTCCTTCCCA +
Preference number: 5 (lower is better)
Translates to: ISYQCILHDRRTHYFSCSVANWY*TPHSFP
Trigger: TGGGAAGGAGTGCGGTGTCAAATACCAATTTGCAAC...ACTGCATGAGAAATAATGTGTGCGTCTGTCGTGAAGGATACACTGGTAGGAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR CAA 90 bp ATTATTTCTCATGCAGTGGCCACCATTCTTACAGGGAGGGTGACAGAAAGCATTGTTGCAAATTGGTATTaGACACCGCACTCCTTCCCA +
Preference number: 5 (lower is better)
Translates to: IISHAVATILTGRVTESIVANWY*TPHSFP
Trigger: TGGGAAGGAGTGCGGTGTCAAATACCAATTTGCAAC...AATGCTTTCTGTCACCCTCCCTGTAAGAATGGTGGCCACTGCATGAGAAATAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR CAA 90 bp TGGCGTCTTATCTGTATTTTCTTCTCACATTTGACTCCAGAGTATTCAGTGCGGCCCTCAAAGCAAGGCTaGGAGTCACACTCATCAACA +
Preference number: 5 (lower is better)
Translates to: WRLICIFFSHLTPEYSVRPSKQG*ESHSST
Trigger: TGTTGATGAGTGTGACTCCAAGCCTTGCTTTGAGGG...CCGCACTGAATACTCTGGAGTCAAATGTGAGAAGAAAATACAGATAAGACGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452576.6
CDS GCA 90 bp TTTGTAGTGCTGAACAAAAACTGCCATGTTGCACAAGCTGTCAATTaGTTGATCTCCCCAGGAGATGGCAGTGTTTCTGAATCTCTCAGA +
Preference number: 5 (lower is better)
Translates to: FVVLNKNCHVAQAVN*LISPGDGSVSESLR
Trigger: TCTGAGAGATTCAGAAACACTGCCATCTCCTGGGGAGATCAAGCAATTGACAGCTTGTGCAACATGGCAGTTTTTGTTCAGCACTACAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000275358.8
ENST00000326715.4
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CAA 90 bp TGCCTCCATAAAGACATTTTGGGTTGCAAATTGGTATTTGACACCGCACTCCTTTTCATCTCAACACATTaGGTTGGCATCTCGGCAGGT +
Preference number: 5 (lower is better)
Translates to: CLHKDILGCKLVFDTALLFISTH*VGISAG
Trigger: ACCTGCCGAGATGCCAACCAAATGTGTTGAGATGAA...AAGGAGTGCGGTGTCAAATACCAATTTGCAACCCAAAATGTCTTTATGGAGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CAA 90 bp AGGAAGGACAATGGCATATGCTGGGCGCAATGCATTCACCACCGTTTTTACATTCCATACATCCCTGAGTaGGTTGTAGTAAGTATACAG +
Preference number: 5 (lower is better)
Translates to: RKDNGICWAQCIHHRFYIPYIPE*VVVSIQ
Trigger: CTGTATACTTACTACAACCAACTCAGGGATGTATGG...AATGTAAAAACGGTGGTGAATGCATTGCGCCCAGCATATGCCATTGTCCTTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CAA 90 bp TTTGACTCCAGAGTATTCAGTGCGGCAGGAACACACATTGGGAAATATGCATCTCTCCTCTTTGACTTCTaGAGAAGAAAGCCTAGACCA +
Preference number: 5 (lower is better)
Translates to: FDSRVFSAAGTHIGKYASLLFDF*RRKPRP
Trigger: TGGTCTAGGCTTTCTTCTCAAGAAGTCAAAGAGGAG...AGATGCATATTTCCCAATGTGTGTTCCTGCCGCACTGAATACTCTGGAGTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CAA 90 bp GCATCTGCCTCCATAAAGACATTTTGGGTTGCAAATTGGTATTTGACACCGCACCTCCTCTTTGACTTCTaGAGAAGAAAGCCTAGACCA +
Preference number: 5 (lower is better)
Translates to: ASASIKTFWVANWYLTPHLLFDF*RRKPRP
Trigger: TGGTCTAGGCTTTCTTCTCAAGAAGTCAAAGAGGAG...GTGCGGTGTCAAATACCAATTTGCAACCCAAAATGTCTTTATGGAGGCAGATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CAA 90 bp CATTTTCCATGGTTTTTGCAATCAGGGTCACAAAGAGCAGTTTGGCAGTTAGAAGTGGCTTCCCCGGCCTaGTGTATATTTCTTATTGGC +
Preference number: 5 (lower is better)
Translates to: HFPWFLQSGSQRAVWQLEVASPA*CIFLIG
Trigger: GCCAATAAGAAATATACACAAGGCCGGGGAAGCCAC...TTCTAACTGCCAAACTGCTCTTTGTGACCCTGATTGCAAAAACCATGGAAAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR CAA 90 bp AGGTGGGTTACAATGTTCTTCATCACAGGTTGCTCCACCATGTCCTGGAAGACAAATTCTTTGAAGCCTTaGCCAAAAACTCTCACCATC +
Preference number: 5 (lower is better)
Translates to: RWVTMFFITGCSTMSWKTNSLKP*PKTLTI
Trigger: GATGGTGAGAGTTTTTGGCAAAGGCTTCAAAGAATT...TGTCTTCCAGGACATGGTGGAGCAACCTGTGATGAAGAACATTGTAACCCACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR CAA 90 bp CAATGGCGTCTTATCTGTATTTTCTTCTCACATTTGACTCCAGAGTATTCAGTGCCAAGACCACAAGGGTaGGATTGGCACCCACTAATG +
Preference number: 5 (lower is better)
Translates to: QWRLICIFFSHLTPEYSVPRPQG*DWHPLM
Trigger: CATTAGTGGGTGCCAATCCAACCCTTGTGGTCTTGG...CACTGAATACTCTGGAGTCAAATGTGAGAAGAAAATACAGATAAGACGCCATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CAA 90 bp GAAGGACAATGGCATATGCTGGGCGCAATGCATTCACCACCGTTTTTACATTTCAACTGTGTTTCAACTTaGAGCTCAGGTGGACAATCA +
Preference number: 5 (lower is better)
Translates to: EGQWHMLGAMHSPPFLHFNCVST*SSGGQS
Trigger: TGATTGTCCACCTGAGCTCAAAGTTGAAACACAGTT...GAAATGTAAAAACGGTGGTGAATGCATTGCGCCCAGCATATGCCATTGTCCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CAA 90 bp CATTTTCCATGGTTTTTGCAATCAGGGTCACAAAGAGCAGTTTGGCAGTTAGAACCATACCAGCCAGGTTaGCACTGGCAAATATCTGGT +
Preference number: 5 (lower is better)
Translates to: HFPWFLQSGSQRAVWQLEPYQPG*HWQISG
Trigger: ACCAGATATTTGCCAGTGCAAACCTGGCTGGTATGG...TTCTAACTGCCAAACTGCTCTTTGTGACCCTGATTGCAAAAACCATGGAAAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR CAA 90 bp TTACATTTCTGCAAGCAGATAGGTGTGTTGCATCGTTTCCCACTCCAACCAGAACCCCAAAGAATCCATTaGGACAGAGGCAAGTATTTG +
Preference number: 5 (lower is better)
Translates to: LHFCKQIGVLHRFPLQPEPQRIH*DRGKYL
Trigger: CAAATACTTGCCTCTGTCCAAATGGATTCTTTGGGG...TTCTGGTTGGAGTGGGAAACGATGCAACACACCTATCTGCTTGCAGAAATGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CAA 90 bp GAGGAAGGACAATGGCATATGCTGGGCGCAATGCATTCACCACCGTTTTTACATATCACAGATGCTTTTTaGGAATCTCCTACCAGTGTA +
Preference number: 5 (lower is better)
Translates to: EEGQWHMLGAMHSPPFLHITDAF*ESPTSV
Trigger: TACACTGGTAGGAGATTCCAAAAAAGCATCTGTGAT...ATGTAAAAACGGTGGTGAATGCATTGCGCCCAGCATATGCCATTGTCCTTCCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR CAA 90 bp TGCCTCCATAAAGACATTTTGGGTTGCAAATTGGTATTTGACACCGCACTCCTTAAGCAGATAGGTGTGTaGCATCGTTTCCCACTCCAA +
Preference number: 5 (lower is better)
Translates to: CLHKDILGCKLVFDTALLKQIGV*HRFPLQ
Trigger: TTGGAGTGGGAAACGATGCAACACACCTATCTGCTT...AAGGAGTGCGGTGTCAAATACCAATTTGCAACCCAAAATGTCTTTATGGAGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CAA 90 bp TTTGACTCCAGAGTATTCAGTGCGGCAGGAACACACATTGGGAAATATGCATCTACAAAAACTGCCATGTaGCACAAGCTGTCAATTGCT +
Preference number: 5 (lower is better)
Translates to: FDSRVFSAAGTHIGKYASTKTAM*HKLSIA
Trigger: AGCAATTGACAGCTTGTGCAACATGGCAGTTTTTGT...AGATGCATATTTCCCAATGTGTGTTCCTGCCGCACTGAATACTCTGGAGTCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CAA 90 bp TGGCAAATATCTGGTGTAAGACACTGGCCTCCATTTTCACAGTGCCTGTTACAAACAAAAACTGCCATGTaGCACAAGCTGTCAATTGCT +
Preference number: 5 (lower is better)
Translates to: WQISGVRHWPPFSQCLLQTKTAM*HKLSIA
Trigger: AGCAATTGACAGCTTGTGCAACATGGCAGTTTTTGT...TTGTAACAGGCACTGTGAAAATGGAGGCCAGTGTCTTACACCAGATATTTGCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR CAA 90 bp TTTGACTCCAGAGTATTCAGTGCGGCAGGAACACACATTGGGAAATATGCATCTCCATACATCCCTGAGTaGGTTGTAGTAAGTATACAG +
Preference number: 5 (lower is better)
Translates to: FDSRVFSAAGTHIGKYASPYIPE*VVVSIQ
Trigger: CTGTATACTTACTACAACCAACTCAGGGATGTATGG...AGATGCATATTTCCCAATGTGTGTTCCTGCCGCACTGAATACTCTGGAGTCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CAA 90 bp TTCGATGGCTACACTTTGTACATGAGGATTCTCCAAGAAAAAGACAGAAGCGCTCTCCTCTTTGACTTCTaGAGAAGAAAGCCTAGACCA +
Preference number: 5 (lower is better)
Translates to: FDGYTLYMRILQEKDRSALLFDF*RRKPRP
Trigger: TGGTCTAGGCTTTCTTCTCAAGAAGTCAAAGAGGAG...AGCGCTTCTGTCTTTTTCTTGGAGAATCCTCATGTACAAAGTGTAGCCATCGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326715.4
CDS-3UTR CAA 90 bp TGGCAAATATCTGGTGTAAGACACTGGCCTCCATTTTCACAGTGCCTGTTACAAGTTGCACTACAATGTTaGAGACTCTATCTCCATCTC +
Preference number: 5 (lower is better)
Translates to: WQISGVRHWPPFSQCLLQVALQC*RLYLHL
Trigger: GAGATGGAGATAGAGTCTCAAACATTGTAGTGCAAC...TTGTAACAGGCACTGTGAAAATGGAGGCCAGTGTCTTACACCAGATATTTGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452576.6
CDS-3UTR CAA 90 bp TTACATTTCTGCAAGCAGATAGGTGTGTTGCATCGTTTCCCACTCCAACCAGAAACACTGTCTAATCTCTaGCCAAGAAAAGCAAGACAC +
Preference number: 5 (lower is better)
Translates to: LHFCKQIGVLHRFPLQPETLSNL*PRKARH
Trigger: GTGTCTTGCTTTTCTTGGCAAGAGATTAGACAGTGT...TTCTGGTTGGAGTGGGAAACGATGCAACACACCTATCTGCTTGCAGAAATGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CAA 90 bp ATGGCATATGCTGGGCGCAATGCATTCACCACCGTTTTTACATTTCTGCAAGCAAGAGAATGTCTTCAATaGATGTGCCATACTCTTCTG +
Preference number: 5 (lower is better)
Translates to: MAYAGRNAFTTVFTFLQARECLQ*MCHTLL
Trigger: CAGAAGAGTATGGCACATCAATTGAAGACATTCTCT...TGCTTGCAGAAATGTAAAAACGGTGGTGAATGCATTGCGCCCAGCATATGCCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CAA 90 bp TTACATTTCTGCAAGCAGATAGGTGTGTTGCATCGTTTCCCACTCCAACCAGAATTGCCGCTGCATAAATaGGGGCATTTTAATACTGAG +
Preference number: 5 (lower is better)
Translates to: LHFCKQIGVLHRFPLQPELPLHK*GHFNTE
Trigger: CTCAGTATTAAAATGCCCCAATTTATGCAGCGGCAA...TTCTGGTTGGAGTGGGAAACGATGCAACACACCTATCTGCTTGCAGAAATGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CAA 90 bp TGGCAAATATCTGGTGTAAGACACTGGCCTCCATTTTCACAGTGCCTGTTACAATTGCCGCTGCATAAATaGGGGCATTTTAATACTGAG +
Preference number: 5 (lower is better)
Translates to: WQISGVRHWPPFSQCLLQLPLHK*GHFNTE
Trigger: CTCAGTATTAAAATGCCCCAATTTATGCAGCGGCAA...TTGTAACAGGCACTGTGAAAATGGAGGCCAGTGTCTTACACCAGATATTTGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR CAA 90 bp TTTGACTCCAGAGTATTCAGTGCGGCAGGAACACACATTGGGAAATATGCATCTTTGCCGCTGCATAAATaGGGGCATTTTAATACTGAG +
Preference number: 5 (lower is better)
Translates to: FDSRVFSAAGTHIGKYASLPLHK*GHFNTE
Trigger: CTCAGTATTAAAATGCCCCAATTTATGCAGCGGCAA...AGATGCATATTTCCCAATGTGTGTTCCTGCCGCACTGAATACTCTGGAGTCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CAA 90 bp GAAGGACAATGGCATATGCTGGGCGCAATGCATTCACCACCGTTTTTACATTTCAATTCTTTGAAGCCTTaGCCAAAAACTCTCACCATC +
Preference number: 5 (lower is better)
Translates to: EGQWHMLGAMHSPPFLHFNSLKP*PKTLTI
Trigger: GATGGTGAGAGTTTTTGGCAAAGGCTTCAAAGAATT...GAAATGTAAAAACGGTGGTGAATGCATTGCGCCCAGCATATGCCATTGTCCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CAA 90 bp CTTCTCACATTTGACTCCAGAGTATTCAGTGCGGCAGGAACACACATTGGGAAAATAGAGACCACAAACTaGGCAAGCACCATCATATAT +
Preference number: 5 (lower is better)
Translates to: LLTFDSRVFSAAGTHIGKIETTN*ASTIIY
Trigger: ATATATGATGGTGCTTGCCAAGTTTGTGGTCTCTAT...TTTCCCAATGTGTGTTCCTGCCGCACTGAATACTCTGGAGTCAAATGTGAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CAA 90 bp GACAATGGCATATGCTGGGCGCAATGCATTCACCACCGTTTTTACATTTCTGCAATAGAGACCACAAACTaGGCAAGCACCATCATATAT +
Preference number: 5 (lower is better)
Translates to: DNGICWAQCIHHRFYISAIETTN*ASTIIY
Trigger: ATATATGATGGTGCTTGCCAAGTTTGTGGTCTCTAT...TGCAGAAATGTAAAAACGGTGGTGAATGCATTGCGCCCAGCATATGCCATTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CAA 90 bp CATTTGACTCCAGAGTATTCAGTGCGGCAGGAACACACATTGGGAAATATGCATCCATTGTTTCACACCTaGGTCCTACAAAACCATAAG +
Preference number: 5 (lower is better)
Translates to: HLTPEYSVRQEHTLGNMHPLFHT*VLQNHK
Trigger: CTTATGGTTTTGTAGGACCAAGGTGTGAAACAATGG...ATGCATATTTCCCAATGTGTGTTCCTGCCGCACTGAATACTCTGGAGTCAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CAA 90 bp TGGCGTCTTATCTGTATTTTCTTCTCACATTTGACTCCAGAGTATTCAGTGCGGGCCTGTTACAAACCATaGTTTCACACCTTGGTCCTA +
Preference number: 5 (lower is better)
Translates to: WRLICIFFSHLTPEYSVRACYKP*FHTLVL
Trigger: TAGGACCAAGGTGTGAAACAATGGTTTGTAACAGGC...CCGCACTGAATACTCTGGAGTCAAATGTGAGAAGAAAATACAGATAAGACGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CAA 90 bp ACCATGTCCTGGAAGACACTGACAAATGTTAGGCTTAATACATTTTCCATGGTTCGGCAGGAACACACATaGGGAAATATGCATCTGCCT +
Preference number: 5 (lower is better)
Translates to: TMSWKTLTNVRLNTFSMVRQEHT*GNMHLP
Trigger: AGGCAGATGCATATTTCCCAATGTGTGTTCCTGCCG...AACCATGGAAAATGTATTAAGCCTAACATTTGTCAGTGTCTTCCAGGACATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR CAA 90 bp TGGCGTCTTATCTGTATTTTCTTCTCACATTTGACTCCAGAGTATTCAGTGCGGTTCGATGGCTACACTTaGTACATGAGGATTCTCCAA +
Preference number: 5 (lower is better)
Translates to: WRLICIFFSHLTPEYSVRFDGYT*YMRILQ
Trigger: TTGGAGAATCCTCATGTACAAAGTGTAGCCATCGAA...CCGCACTGAATACTCTGGAGTCAAATGTGAGAAGAAAATACAGATAAGACGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CAA 90 bp TGCCTCCATAAAGACATTTTGGGTTGCAAATTGGTATTTGACACCGCACTCCTTACACTGTCTAATCTCTaGCCAAGAAAAGCAAGACAC +
Preference number: 5 (lower is better)
Translates to: CLHKDILGCKLVFDTALLTLSNL*PRKARH
Trigger: GTGTCTTGCTTTTCTTGGCAAGAGATTAGACAGTGT...AAGGAGTGCGGTGTCAAATACCAATTTGCAACCCAAAATGTCTTTATGGAGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CAA 90 bp AGGCTTGTAATTCATATACTTGATGCTACTCAATGGCGTCTTATCTGTATTTTCACCACAAGGGTTGGATaGGCACCCACTAATGTCCAC +
Preference number: 5 (lower is better)
Translates to: RLVIHILDATQWRLICIFTTRVG*APTNVH
Trigger: GTGGACATTAGTGGGTGCCAATCCAACCCTTGTGGT...GAAAATACAGATAAGACGCCATTGAGTAGCATCAAGTATATGAATTACAAGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CAA 90 bp CAATGGCGTCTTATCTGTATTTTCTTCTCACATTTGACTCCAGAGTATTCAGTGTACATTTGCAGATGTTaGGGGCAACACACTCCCTAC +
Preference number: 5 (lower is better)
Translates to: QWRLICIFFSHLTPEYSVYICRC*GQHTPY
Trigger: GTAGGGAGTGTGTTGCCCCAAACATCTGCAAATGTA...CACTGAATACTCTGGAGTCAAATGTGAGAAGAAAATACAGATAAGACGCCATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CAA 90 bp AGAAAGCATTCTGACAGTGTTCCCCAAAGAATCCATTTGGACAGAGGCAAGTATGTCACAAAGAGCAGTTaGGCAGTTAGAACCAATGTA +
Preference number: 5 (lower is better)
Translates to: RKHSDSVPQRIHLDRGKYVTKSS*AVRTNV
Trigger: TACATTGGTTCTAACTGCCAAACTGCTCTTTGTGAC...ATACTTGCCTCTGTCCAAATGGATTCTTTGGGGAACACTGTCAGAATGCTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR CAA 90 bp CATTTTCCATGGTTTTTGCAATCAGGGTCACAAAGAGCAGTTTGGCAGTTAGAAGACAGAGGCAAGTATTaGGCTTATTACACGAACCAC +
Preference number: 5 (lower is better)
Translates to: HFPWFLQSGSQRAVWQLEDRGKY*AYYTNH
Trigger: GTGGTTCGTGTAATAAGCCAAATACTTGCCTCTGTC...TTCTAACTGCCAAACTGCTCTTTGTGACCCTGATTGCAAAAACCATGGAAAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR CAA 90 bp TGTATGCTTTCAGCCAAGAAGAAGAAATGTGAATTGCTTTGGCAATCGTCAGTTTGTGAGATGTCTGTTTaGATGCTTTCACGTGTGGGG +
Preference number: 5 (lower is better)
Translates to: CMLSAKKKKCELLWQSSVCEMSV*MLSRVG
Trigger: CCCCACACGTGAAAGCATCAAAACAGACATCTCACA...AACTGACGATTGCCAAAGCAATTCACATTTCTTCTTCTTGGCTGAAAGCATACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326715.4
CDS-3UTR CAA 90 bp AGGCTTGTAATTCATATACTTGATGCTACTCAATGGCGTCTTATCTGTATTTTCCCTGCTTCTGTCCCTTaGCTCCTGCTGTTGGTTTTG +
Preference number: 5 (lower is better)
Translates to: RLVIHILDATQWRLICIFPASVP*LLLLVL
Trigger: CAAAACCAACAGCAGGAGCAAAGGGACAGAAGCAGG...GAAAATACAGATAAGACGCCATTGAGTAGCATCAAGTATATGAATTACAAGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452576.6
CDS-3UTR CAA 90 bp AGGCTTGTAATTCATATACTTGATGCTACTCAATGGCGTCTTATCTGTATTTTCTCTCAACACATTTGGTaGGCATCTCGGCAGGTCTGT +
Preference number: 5 (lower is better)
Translates to: RLVIHILDATQWRLICIFSQHIW*ASRQVC
Trigger: ACAGACCTGCCGAGATGCCAACCAAATGTGTTGAGA...GAAAATACAGATAAGACGCCATTGAGTAGCATCAAGTATATGAATTACAAGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CAA 90 bp CATATACTTGATGCTACTCAATGGCGTCTTATCTGTATTTTCTTCTCACATTTGGTGGCTTCCCCGGCCTaGTGTATATTTCTTATTGGC +
Preference number: 5 (lower is better)
Translates to: HILDATQWRLICIFFSHLVASPA*CIFLIG
Trigger: GCCAATAAGAAATATACACAAGGCCGGGGAAGCCAC...CAAATGTGAGAAGAAAATACAGATAAGACGCCATTGAGTAGCATCAAGTATATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CAA 90 bp CATTTTCCATGGTTTTTGCAATCAGGGTCACAAAGAGCAGTTTGGCAGTTAGAACCATTGTTTCACACCTaGGTCCTACAAAACCATAAG +
Preference number: 5 (lower is better)
Translates to: HFPWFLQSGSQRAVWQLEPLFHT*VLQNHK
Trigger: CTTATGGTTTTGTAGGACCAAGGTGTGAAACAATGG...TTCTAACTGCCAAACTGCTCTTTGTGACCCTGATTGCAAAAACCATGGAAAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS-3UTR CAA 90 bp CATTTTCCATGGTTTTTGCAATCAGGGTCACAAAGAGCAGTTTGGCAGTTAGAAATTTTGGGTTGCAAATaGGTATTTGACACCGCACTC +
Preference number: 5 (lower is better)
Translates to: HFPWFLQSGSQRAVWQLEILGCK*VFDTAL
Trigger: GAGTGCGGTGTCAAATACCAATTTGCAACCCAAAAT...TTCTAACTGCCAAACTGCTCTTTGTGACCCTGATTGCAAAAACCATGGAAAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000521169.5
CDS TCA 90 bp GTTCCACAGGAAATCCTCATTAACTATTGGTTGCACTACAATGTTTaGGACTCTATCTCCATCTCGAGAAAAATCTGTGACAGCAGTGTA +
Preference number: 5 (lower is better)
Translates to: VPQEILINYWLHYNV*DSISISRKICDSSV
Trigger: TACACTGCTGTCACAGATTTTTCTCGAGATGGAGATAGAGTCTCAAACATTGTAGTGCAACCAATAGTTAATGAGGATTTCCTGTGGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275358.8
ENST00000452576.6
CDS-3UTR CAA 90 bp CATATACTTGATGCTACTCAATGGCGTCTTATCTGTATTTTCTTCTCACATTTGTTTGTCTTGCAATGCTaGAATCACTGGGGGCTGGTT +
Preference number: 5 (lower is better)
Translates to: HILDATQWRLICIFFSHLFVLQC*NHWGLV
Trigger: AACCAGCCCCCAGTGATTCAAGCATTGCAAGACAAA...CAAATGTGAGAAGAAAATACAGATAAGACGCCATTGAGTAGCATCAAGTATATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CAA 90 bp CAATGGCGTCTTATCTGTATTTTCTTCTCACATTTGACTCCAGAGTATTCAGTGATTTTGGGTTGCAAATaGGTATTTGACACCGCACTC +
Preference number: 5 (lower is better)
Translates to: QWRLICIFFSHLTPEYSVILGCK*VFDTAL
Trigger: GAGTGCGGTGTCAAATACCAATTTGCAACCCAAAAT...CACTGAATACTCTGGAGTCAAATGTGAGAAGAAAATACAGATAAGACGCCATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS-3UTR CAA 90 bp TGGCAATCGTCAGTTTGGCCGAGTATTAGTAATATGATTGGGCTAAAATTTGATCCATACATCCCTGAGTaGGTTGTAGTAAGTATACAG +
Preference number: 5 (lower is better)
Translates to: WQSSVWPSISNMIGLKFDPYIPE*VVVSIQ
Trigger: CTGTATACTTACTACAACCAACTCAGGGATGTATGG...ATCAAATTTTAGCCCAATCATATTACTAATACTCGGCCAAACTGACGATTGCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326715.4
CDS-3UTR CAA 90 bp TGGCAATCGTCAGTTTGGCCGAGTATTAGTAATATGATTGGGCTAAAATTTGATTTCGATGGCTACACTTaGTACATGAGGATTCTCCAA +
Preference number: 5 (lower is better)
Translates to: WQSSVWPSISNMIGLKFDFDGYT*YMRILQ
Trigger: TTGGAGAATCCTCATGTACAAAGTGTAGCCATCGAA...ATCAAATTTTAGCCCAATCATATTACTAATACTCGGCCAAACTGACGATTGCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326715.4
CDS TCA 90 bp ACATCTTGGCTTTTTATGAACAAATATGGTTGTGATTCACGTAGCTaGCCATTGCACATATCAAAAGTAACTATATCACCTCCTTCCTGG +
Preference number: 5 (lower is better)
Translates to: TSWLFMNKYGCDSRS*PLHISKVTISPPSW
Trigger: CCAGGAAGGAGGTGATATAGTTACTTTTGATATGTGCAATGGTCAGCTACGTGAATCACAACCATATTTGTTCATAAAAAGCCAAGATGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275358.8
ENST00000452576.6
CDS-3UTR CAA 90 bp AGGCTTGTAATTCATATACTTGATGCTACTCAATGGCGTCTTATCTGTATTTTCCATCTGTTTTGTCGATaGTACCTCATTTCTTGGCTG +
Preference number: 5 (lower is better)
Translates to: RLVIHILDATQWRLICIFHLFCR*YLISWL
Trigger: CAGCCAAGAAATGAGGTACAATCGACAAAACAGATG...GAAAATACAGATAAGACGCCATTGAGTAGCATCAAGTATATGAATTACAAGCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS CCA 90 bp AAATGTAATTATATGTGGGTCAGTAAATGTATAGCAGTAAGCAGTTaGGACATCCTTTACTTTGATCTGGATGCTGTCTGGAATGTAGTT +
Preference number: 5 (lower is better)
Translates to: KCNYMWVSKCIAVSS*DILYFDLDAVWNVV
Trigger: AACTACATTCCAGACAGCATCCAGATCAAAGTAAAGGATGTCCCAACTGCTTACTGCTATACATTTACTGACCCACATATAATTACATTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275358.8
ENST00000452576.6
CDS TCA 90 bp AGATTTGTACTGAGACTACGATCCACATGTTCAATATCTGATATCTaGTGGGAAATAGGCTTTACTGAATTATCCATTTGGGCTGTAATT +
Preference number: 5 (lower is better)
Translates to: RFVLRLRSTCSISDI*WEIGFTELSIWAVI
Trigger: AATTACAGCCCAAATGGATAATTCAGTAAAGCCTATTTCCCATCAGATATCAGATATTGAACATGTGGATCGTAGTCTCAGTACAAATCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649524.1
CDS CCA 72 bp CACGCAGGCTCCGCCAGGCATCGCTGCTTCCGCAGGTaGGGCGAAAGGCGTCGCAGAGCCCGGGCCGCGGGT +
Preference number: 6 (lower is better)
Translates to: HAGSARHRCFRR*GERRRRARAAG
Trigger: ACCCGCGGCCCGGGCTCTGCGACGCCTTTCGCCCCACCTGCGGAAGCAGCGATGCCTGGCGGAGCCTGCGTG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275358.8
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS GCA 72 bp CGCGATCACCAGCACGCAGGCTCCGCCAGGCATCGCTaGTTCCGCAGGTGGGGCGAAAGGCGTCGCAGAGCC +
Preference number: 6 (lower is better)
Translates to: RDHQHAGSARHR*FRRWGERRRRA
Trigger: GGCTCTGCGACGCCTTTCGCCCCACCTGCGGAAGCAGCGATGCCTGGCGGAGCCTGCGTGCTGGTGATCGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275358.8
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS GCA 72 bp CCCTCGGGCCTCCTTTCTTGGATTTTCTCAGTCTGTTaGTGCTTGGAACAGGGAAGCTCCGCGTCCTCGTTC +
Preference number: 6 (lower is better)
Translates to: PSGLLSWIFSVC*CLEQGSSASSF
Trigger: GAACGAGGACGCGGAGCTTCCCTGTTCCAAGCAGCAACAGACTGAGAAAATCCAAGAAAGGAGGCCCGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275358.8
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS CAA 72 bp CCCCTCGGGCCTCCTTTCTTGGATTTTCTCAGTCTGTaGCTGCTTGGAACAGGGAAGCTCCGCGTCCTCGTT +
Preference number: 6 (lower is better)
Translates to: PLGPPFLDFLSL*LLGTGKLRVLV
Trigger: AACGAGGACGCGGAGCTTCCCTGTTCCAAGCAGCAACAGACTGAGAAAATCCAAGAAAGGAGGCCCGAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275358.8
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS GCA 72 bp TCGGGCCTCCTTTCTTGGATTTTCTCAGTCTGTTGCTaGTTGGAACAGGGAAGCTCCGCGTCCTCGTTCTGG +
Preference number: 6 (lower is better)
Translates to: SGLLSWIFSVCC*LEQGSSASSFW
Trigger: CCAGAACGAGGACGCGGAGCTTCCCTGTTCCAAGCAGCAACAGACTGAGAAAATCCAAGAAAGGAGGCCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS CCA 72 bp GCCTCCTTTCTTGGATTTTCTCAGTCTGTTGCTGCTTaGAACAGGGAAGCTCCGCGTCCTCGTTCTGGGGTG +
Preference number: 6 (lower is better)
Translates to: ASFLGFSQSVAA*NREAPRPRSGV
Trigger: CACCCCAGAACGAGGACGCGGAGCTTCCCTGTTCCAAGCAGCAACAGACTGAGAAAATCCAAGAAAGGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS CAA 72 bp GGCCTCCTTTCTTGGATTTTCTCAGTCTGTTGCTGCTaGGAACAGGGAAGCTCCGCGTCCTCGTTCTGGGGT +
Preference number: 6 (lower is better)
Translates to: GLLSWIFSVCCC*EQGSSASSFWG
Trigger: ACCCCAGAACGAGGACGCGGAGCTTCCCTGTTCCAAGCAGCAACAGACTGAGAAAATCCAAGAAAGGAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS CCA 72 bp ATGGCAGTGTTTCTGAATCTCTCAGAGACAGCCAGATaGGGGCCTGAGTTCCACAATGGTTCATCTCAACAC +
Preference number: 6 (lower is better)
Translates to: MAVFLNLSETAR*GPEFHNGSSQH
Trigger: GTGTTGAGATGAACCATTGTGGAACTCAGGCCCCCATCTGGCTGTCTCTGAGAGATTCAGAAACACTGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000275358.8
ENST00000326715.4
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS CAA 90 bp GTAGTGCTGAACAAAAACTGCCATGTTGCACAAGCTGTCAATTGCTaGATCTCCCCAGGAGATGGCAGTGTTTCTGAATCTCTCAGAGAC +
Preference number: 6 (lower is better)
Translates to: VVLNKNCHVAQAVNC*ISPGDGSVSESLRD
Trigger: GTCTCTGAGAGATTCAGAAACACTGCCATCTCCTGGGGAGATCAAGCAATTGACAGCTTGTGCAACATGGCAGTTTTTGTTCAGCACTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000275358.8
ENST00000326715.4
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS TCA 72 bp GTTTCTGAATCTCTCAGAGACAGCCAGATGGGGGCCTaGGTTCCACAATGGTTCATCTCAACACATTTGGTT +
Preference number: 6 (lower is better)
Translates to: VSESLRDSQMGA*VPQWFISTHLV
Trigger: AACCAAATGTGTTGAGATGAACCATTGTGGAACTCAGGCCCCCATCTGGCTGTCTCTGAGAGATTCAGAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000275358.8
ENST00000326715.4
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS TCA 72 bp ACAAAAACTGCCATGTTGCACAAGCTGTCAATTGCTTaGTCTCCCCAGGAGATGGCAGTGTTTCTGAATCTC +
Preference number: 6 (lower is better)
Translates to: TKTAMLHKLSIA*SPQEMAVFLNL
Trigger: GAGATTCAGAAACACTGCCATCTCCTGGGGAGATCAAGCAATTGACAGCTTGTGCAACATGGCAGTTTTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000275358.8
ENST00000326715.4
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS GCA 72 bp CTGAACAAAAACTGCCATGTTGCACAAGCTGTCAATTaGTTGATCTCCCCAGGAGATGGCAGTGTTTCTGAA +
Preference number: 6 (lower is better)
Translates to: LNKNCHVAQAVN*LISPGDGSVSE
Trigger: TTCAGAAACACTGCCATCTCCTGGGGAGATCAAGCAATTGACAGCTTGTGCAACATGGCAGTTTTTGTTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000275358.8
ENST00000326715.4
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS CCA 72 bp CTGAGTTCCACAATGGTTCATCTCAACACATTTGGTTaGCATCTCGGCAGGTCTGTCAAGGATGAGAAATCT +
Preference number: 6 (lower is better)
Translates to: LSSTMVHLNTFG*HLGRSVKDEKS
Trigger: AGATTTCTCATCCTTGACAGACCTGCCGAGATGCCAACCAAATGTGTTGAGATGAACCATTGTGGAACTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000275358.8
ENST00000326715.4
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS CCA 72 bp AGGTATTCAGGCATGCTACTCCCTCAAAGCAAGGCTTaGAGTCACACTCATCAACATCTTCCTGGCAATTTT +
Preference number: 6 (lower is better)
Translates to: RYSGMLLPQSKA*SHTHQHLPGNF
Trigger: AAAATTGCCAGGAAGATGTTGATGAGTGTGACTCCAAGCCTTGCTTTGAGGGAGTAGCATGCCTGAATACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000644150.1
CDS CCA 72 bp CATGAAATGCTTGTGGCATATTCTATCCTAGTGGTCTaGGGCTATCTGGTGATTGGACACCAATGCAGTCAT +
Preference number: 6 (lower is better)
Translates to: HEMLVAYSILVV*GYLVIGHQCSH
Trigger: ATGACTGCATTGGTGTCCAATCACCAGATAGCCCCAGACCACTAGGATAGAATATGCCACAAGCATTTCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485526.1
CDS CAA 72 bp AGAACCCTTCCGCACAGTAGCCCATACATCCCTGAGTaGGTTGTAGTAAGTATACAGAAAAGTTCCCACAGT +
Preference number: 6 (lower is better)
Translates to: RTLPHSSPYIPE*VVVSIQKSSHS
Trigger: ACTGTGGGAACTTTTCTGTATACTTACTACAACCAACTCAGGGATGTATGGGCTACTGTGCGGAAGGGTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326715.4
CDS CAA 72 bp AAGGTATTCAGGCATGCTACTCCCTCAAAGCAAGGCTaGGAGTCACACTCATCAACATCTTCCTGGCAATTT +
Preference number: 6 (lower is better)
Translates to: KVFRHATPSKQG*ESHSSTSSWQF
Trigger: AAATTGCCAGGAAGATGTTGATGAGTGTGACTCCAAGCCTTGCTTTGAGGGAGTAGCATGCCTGAATACCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452576.6
ENST00000644150.1
CDS CAA 90 bp TCTTGGCAAAGAACCCTTCCGCACAGTAGCCCATACATCCCTGAGTaGGTTGTAGTAAGTATACAGAAAAGTTCCCACAGTTTCTTACAG +
Preference number: 6 (lower is better)
Translates to: SWQRTLPHSSPYIPE*VVVSIQKSSHSFLQ
Trigger: CTGTAAGAAACTGTGGGAACTTTTCTGTATACTTACTACAACCAACTCAGGGATGTATGGGCTACTGTGCGGAAGGGTTCTTTGCCAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326715.4
CDS CAA 72 bp AACAAAAACTGCCATGTTGCACAAGCTGTCAATTGCTaGATCTCCCCAGGAGATGGCAGTGTTTCTGAATCT +
Preference number: 6 (lower is better)
Translates to: NKNCHVAQAVNC*ISPGDGSVSES
Trigger: AGATTCAGAAACACTGCCATCTCCTGGGGAGATCAAGCAATTGACAGCTTGTGCAACATGGCAGTTTTTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000275358.8
ENST00000326715.4
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS TCA 72 bp TGTTTGAGACTCTATCTCCATCTCGAGAAAAATCTGTaGCAGCAGTGTAGTACACAAAAGTGTGGCTACAGG +
Preference number: 6 (lower is better)
Translates to: CLRLYLHLEKNL*QQCSTQKCGYR
Trigger: CCTGTAGCCACACTTTTGTGTACTACACTGCTGTCACAGATTTTTCTCGAGATGGAGATAGAGTCTCAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275358.8
ENST00000452576.6
CDS GCA 72 bp AAGAGACAGCAGTCTTTTGTAGTGCTGAACAAAAACTaGCATGTTGCACAAGCTGTCAATTGCTTGATCTCC +
Preference number: 6 (lower is better)
Translates to: KRQQSFVVLNKN*HVAQAVNCLIS
Trigger: GGAGATCAAGCAATTGACAGCTTGTGCAACATGGCAGTTTTTGTTCAGCACTACAAAAGACTGCTGTCTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000275358.8
ENST00000326715.4
ENST00000452576.6
ENST00000521169.5
ENST00000614403.4
CDS TCA 72 bp GCAGTCCCACTGACGTACATGGACTTCAAAATCACGTaGCATACTCTTATAAAGCACAAATGTTCCAGTCTT +
Preference number: 6 (lower is better)
Translates to: AVPLTYMDFKIT*HTLIKHKCSSL
Trigger: AAGACTGGAACATTTGTGCTTTATAAGAGTATGTCACGTGATTTTGAAGTCCATGTACGTCAGTGGGACTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275358.8
ENST00000452576.6
CDS CCA 72 bp TATATGTGGGTCAGTAAATGTATAGCAGTAAGCAGTTaGGACATCCTTTACTTTGATCTGGATGCTGTCTGG +
Preference number: 6 (lower is better)
Translates to: YMWVSKCIAVSS*DILYFDLDAVW
Trigger: CCAGACAGCATCCAGATCAAAGTAAAGGATGTCCCAACTGCTTACTGCTATACATTTACTGACCCACATATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275358.8
ENST00000452576.6
CDS CAA 72 bp GAGCGGGAGATGTTGTTAGTTGTGCTCAGTAACTTTTaGATAGTAGCGGGAGTAGGAGTAAATCTTGTACTA +
Preference number: 6 (lower is better)
Translates to: EREMLLVVLSNF*IVAGVGVNLVL
Trigger: TAGTACAAGATTTACTCCTACTCCCGCTACTATCAAAAAGTTACTGAGCACAACTAACAACATCTCCCGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649524.1
CDS CAA 90 bp TTATCCATTTGGGCTGTAATTAATTTCAGTGATGAGCGGGAGATGTaGTTAGTTGTGCTCAGTAACTTTTTGATAGTAGCGGGAGTAGGA +
Preference number: 6 (lower is better)
Translates to: LSIWAVINFSDEREM*LVVLSNFLIVAGVG
Trigger: TCCTACTCCCGCTACTATCAAAAAGTTACTGAGCACAACTAACAACATCTCCCGCTCATCACTGAAATTAATTACAGCCCAAATGGATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649524.1
CDS GCA 72 bp TTTATAGTGAAGGCATTTCCACTTGTTGGCTTAACATaGCTCTTTCTCCCTTGGGCATTTTTATCATCCTCT +
Preference number: 6 (lower is better)
Translates to: FIVKAFPLVGLT*LFLPWAFLSSS
Trigger: AGAGGATGATAAAAATGCCCAAGGGAGAAAGAGGCATGTTAAGCCAACAAGTGGAAATGCCTTCACTATAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649524.1
CDS CAA 90 bp TTCAGTGATGAGCGGGAGATGTTGTTAGTTGTGCTCAGTAACTTTTaGATAGTAGCGGGAGTAGGAGTAAATCTTGTACTAATTAGTGAA +
Preference number: 6 (lower is better)
Translates to: FSDEREMLLVVLSNF*IVAGVGVNLVLISE
Trigger: TTCACTAATTAGTACAAGATTTACTCCTACTCCCGCTACTATCAAAAAGTTACTGAGCACAACTAACAACATCTCCCGCTCATCACTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649524.1
CDS TCA 72 bp GAAATCCTCATTAACTATTGGTTGCACTACAATGTTTaGGACTCTATCTCCATCTCGAGAAAAATCTGTGAC +
Preference number: 6 (lower is better)
Translates to: EILINYWLHYNV*DSISISRKICD
Trigger: GTCACAGATTTTTCTCGAGATGGAGATAGAGTCTCAAACATTGTAGTGCAACCAATAGTTAATGAGGATTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275358.8
ENST00000452576.6
CDS TCA 72 bp CTGAGACTACGATCCACATGTTCAATATCTGATATCTaGTGGGAAATAGGCTTTACTGAATTATCCATTTGG +
Preference number: 6 (lower is better)
Translates to: LRLRSTCSISDI*WEIGFTELSIW
Trigger: CCAAATGGATAATTCAGTAAAGCCTATTTCCCATCAGATATCAGATATTGAACATGTGGATCGTAGTCTCAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649524.1
CDS TCA 72 bp CAATACACAAATTTTTACAATGACCATCCTTTGACATaGAATGCTTGTGGCATATTCTATCCTAGTGGTCTG +
Preference number: 6 (lower is better)
Translates to: QYTNFYNDHPLT*NACGIFYPSGL
Trigger: CAGACCACTAGGATAGAATATGCCACAAGCATTTCATGTCAAAGGATGGTCATTGTAAAAATTTGTGTATTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485526.1