RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for VWCE (Homo sapiens)

Ensembl gene IDs: ENSG00000167992

Ensembl transcript IDs: ENST00000301770.10, ENST00000335613.10, ENST00000398808.3, ENST00000535599.1, ENST00000535710.1, ENST00000538438.1, ENST00000538579.1, ENST00000613271.4

Found 531 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GAGCAGCCTGTCGAGGGTGTGGGCTCCTGGCAGGTGAAGCAACACTaGCCAGGGCCCAGCCGCCACTCTTCTCGGGGGCAGGCCAGCTCA +
Preference number: 1 (lower is better)
Translates to: EQPVEGVGSWQVKQH*PGPSRHSSRGQASS
Trigger: TGAGCTGGCCTGCCCCCGAGAAGAGTGGCGGCTGGGCCCTGGGCAGTGTTGCTTCACCTGCCAGGAGCCCACACCCTCGACAGGCTGCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000301770.10
3UTR TCA 90 bp GCCAGGCAGAGGAGGCCACCTGGACACTATCTGGGCCCCAGAGGCTaGGAACGAGCGCTCTGGAGTCACAGGAGGTGGCTGAGGAGCCCC +
Preference number: 1 (lower is better)
Translates to: ARQRRPPGHYLGPRG*ERALWSHRRWLRSP
Trigger: GGGGCTCCTCAGCCACCTCCTGTGACTCCAGAGCGCTCGTTCTCAGCCTCTGGGGCCCAGATAGTGTCCAGGTGGCCTCCTCTGCCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301770.10
3UTR GCA 90 bp GGCCGGCCGGCCTCAGGAAGCAACAGAAGCATCTTGGACGGGTGTTaGCGGGGTTGCAGGATGGCAGATGGGGCCAGCACGGCTTTCGGG +
Preference number: 1 (lower is better)
Translates to: GRPASGSNRSILDGC*RGCRMADGASTAFG
Trigger: CCCGAAAGCCGTGCTGGCCCCATCTGCCATCCTGCAACCCCGGCAACACCCGTCCAAGATGCTTCTGTTGCTTCCTGAGGCCGGCCGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301770.10
3UTR CCA 90 bp GGGACAGGGCAGGCCGGCCGGCCTCAGGAAGCAACAGAAGCATCTTaGACGGGTGTTGCCGGGGTTGCAGGATGGCAGATGGGGCCAGCA +
Preference number: 1 (lower is better)
Translates to: GTGQAGRPQEATEAS*TGVAGVAGWQMGPA
Trigger: TGCTGGCCCCATCTGCCATCCTGCAACCCCGGCAACACCCGTCCAAGATGCTTCTGTTGCTTCCTGAGGCCGGCCGGCCTGCCCTGTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301770.10
3UTR GCA 90 bp GAGGGAGCCCAGGCATCCCCACCAGGTTCATCCTTGGAGCTGCCCTaGACACACCCTGGGCCACTGGCAGAGGTCCTCTCTCCAGAGTCT +
Preference number: 1 (lower is better)
Translates to: EGAQASPPGSSLELP*THPGPLAEVLSPES
Trigger: AGACTCTGGAGAGAGGACCTCTGCCAGTGGCCCAGGGTGTGTGCAGGGCAGCTCCAAGGATGAACCTGGTGGGGATGCCTGGGCTCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
3UTR TCA 90 bp CCTGCTGAACAGTCTGGGCAGCACTGTCCAGGGATCCGGATCGGGTaGGGGCAGGAGTCCACACAGTCTGTCCTCTTGCAGCTCACCGAG +
Preference number: 1 (lower is better)
Translates to: PAEQSGQHCPGIRIG*GQESTQSVLLQLTE
Trigger: CTCGGTGAGCTGCAAGAGGACAGACTGTGTGGACTCCTGCCCTCACCCGATCCGGATCCCTGGACAGTGCTGCCCAGACTGTTCAGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301770.10
3UTR CCA 90 bp CAGAAGCATCTTGGACGGGTGTTGCCGGGGTTGCAGGATGGCAGATaGGGCCAGCACGGCTTTCGGGAAAGCTTCACAGGACACGCGGTC +
Preference number: 1 (lower is better)
Translates to: QKHLGRVLPGLQDGR*GQHGFRESFTGHAV
Trigger: GACCGCGTGTCCTGTGAAGCTTTCCCGAAAGCCGTGCTGGCCCCATCTGCCATCCTGCAACCCCGGCAACACCCGTCCAAGATGCTTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301770.10
3UTR TCA 90 bp CGGCTTTCGGGAAAGCTTCACAGGACACGCGGTCAGCTCGGAGCCTaGAGCCAGGTCGGCATGTGCATAGGAAGCTGCCCACGGTGTTGT +
Preference number: 1 (lower is better)
Translates to: RLSGKLHRTRGQLGA*SQVGMCIGSCPRCC
Trigger: ACAACACCGTGGGCAGCTTCCTATGCACATGCCGACCTGGCTTCAGGCTCCGAGCTGACCGCGTGTCCTGTGAAGCTTTCCCGAAAGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301770.10
3UTR GCA 90 bp AGGCATTCGTCAGTGTCTTGGCAGCTGTGGCGGTCGGCAGACAGCTaGATGCCCGGCCCACACTCGCACACAAACCCACCTTCTGTGTTC +
Preference number: 1 (lower is better)
Translates to: RHSSVSWQLWRSADS*MPGPHSHTNPPSVF
Trigger: GAACACAGAAGGTGGGTTTGTGTGCGAGTGTGGGCCGGGCATGCAGCTGTCTGCCGACCGCCACAGCTGCCAAGACACTGACGAATGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535599.1
3UTR CCA 90 bp GAGTCCACACAGTCTGTCCTCTTGCAGCTCACCGAGCCATCTGCCTaGAGGAAGGAGGAACTTCACCAAGACCCCACCGGTGACACCGGC +
Preference number: 1 (lower is better)
Translates to: ESTQSVLLQLTEPSA*RKEELHQDPTGDTG
Trigger: GCCGGTGTCACCGGTGGGGTCTTGGTGAAGTTCCTCCTTCCTCCAGGCAGATGGCTCGGTGAGCTGCAAGAGGACAGACTGTGTGGACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301770.10
3UTR TCA 90 bp CTCCCAGCTGGCACGTGCACCGGGTGCAGGGTTCATCATCCAAGGTaGACACCTGGCCATTCGCCACCTTCCTTCCCTCGTAGTTGCAGT +
Preference number: 1 (lower is better)
Translates to: LPAGTCTGCRVHHPR*TPGHSPPSFPRSCS
Trigger: ACTGCAACTACGAGGGAAGGAAGGTGGCGAATGGCCAGGTGTTCACCTTGGATGATGAACCCTGCACCCGGTGCACGTGCCAGCTGGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301770.10
3UTR GCA 90 bp GCCTCAGGAAGCAACAGAAGCATCTTGGACGGGTGTTGCCGGGGTTaGAGGATGGCAGATGGGGCCAGCACGGCTTTCGGGAAAGCTTCA +
Preference number: 1 (lower is better)
Translates to: ASGSNRSILDGCCRG*RMADGASTAFGKAS
Trigger: TGAAGCTTTCCCGAAAGCCGTGCTGGCCCCATCTGCCATCCTGCAACCCCGGCAACACCCGTCCAAGATGCTTCTGTTGCTTCCTGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301770.10
3UTR GCA 90 bp ATTCGTCAGTGTCTTGGCAGCTGTGGCGGTCGGCAGACAGCTGCATaGCCGGCCCACACTCGCACACAAACCCACCTTCTGTGTTCACAC +
Preference number: 1 (lower is better)
Translates to: IRQCLGSCGGRQTAA*PAHTRTQTHLLCSH
Trigger: GTGTGAACACAGAAGGTGGGTTTGTGTGCGAGTGTGGGCCGGGCATGCAGCTGTCTGCCGACCGCCACAGCTGCCAAGACACTGACGAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535599.1
3UTR CCA 90 bp GAAGCAACAGAAGCATCTTGGACGGGTGTTGCCGGGGTTGCAGGATaGCAGATGGGGCCAGCACGGCTTTCGGGAAAGCTTCACAGGACA +
Preference number: 1 (lower is better)
Translates to: EATEASWTGVAGVAG*QMGPARLSGKLHRT
Trigger: TGTCCTGTGAAGCTTTCCCGAAAGCCGTGCTGGCCCCATCTGCCATCCTGCAACCCCGGCAACACCCGTCCAAGATGCTTCTGTTGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301770.10
3UTR CCA 90 bp GTGAGTGGAATCCCAGCCGGACGCAACTCTTCCTCCAGGAGAACTTaGCAGTCCCAACCCTTCTCAAAAGATGAGCCAGCCACGCGGTCC +
Preference number: 1 (lower is better)
Translates to: VSGIPAGRNSSSRRT*QSQPFSKDEPATRS
Trigger: GGACCGCGTGGCTGGCTCATCTTTTGAGAAGGGTTGGGACTGCCAAGTTCTCCTGGAGGAAGAGTTGCGTCCGGCTGGGATTCCACTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
3UTR GCA 90 bp ACAGGTGGTACACTCGTCACCACCCCCACTGAACACAGCCCCGTCTaGGTACCACCGGCCGTGGAAATAGCATCTCACTGGAACACAAGT +
Preference number: 1 (lower is better)
Translates to: TGGTLVTTPTEHSPV*VPPAVEIASHWNTS
Trigger: ACTTGTGTTCCAGTGAGATGCTATTTCCACGGCCGGTGGTACGCAGACGGGGCTGTGTTCAGTGGGGGTGGTGACGAGTGTACCACCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301770.10
3UTR CCA 90 bp CAGCACATTCCAAACACTTCTTGGGAACAAGGTTACATCCAGCCTTaGGGGTCTTCCATCCTCACCAGGGCCCCTGCAGGAGGGAGCCCA +
Preference number: 1 (lower is better)
Translates to: QHIPNTSWEQGYIQP*GSSILTRAPAGGSP
Trigger: TGGGCTCCCTCCTGCAGGGGCCCTGGTGAGGATGGAAGACCCCCAAGGCTGGATGTAACCTTGTTCCCAAGAAGTGTTTGGAATGTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
3UTR CCA 90 bp AACCTCAGAGAGACGCATGACACCTGGCGGTACAGTCCCAGTGAGTaGAATCCCAGCCGGACGCAACTCTTCCTCCAGGAGAACTTGGCA +
Preference number: 1 (lower is better)
Translates to: NLRETHDTWRYSPSE*NPSRTQLFLQENLA
Trigger: TGCCAAGTTCTCCTGGAGGAAGAGTTGCGTCCGGCTGGGATTCCACTCACTGGGACTGTACCGCCAGGTGTCATGCGTCTCTCTGAGGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
3UTR CCA 90 bp CCTGTGCACGATGGGCAGCACCCACCATCTCTGGAGGGAATTGGGTaGGAACAAGCAGCTTCACACCTCACCTTTTCACAGGTCACCTTC +
Preference number: 1 (lower is better)
Translates to: PVHDGQHPPSLEGIG*EQAASHLTFSQVTF
Trigger: GAAGGTGACCTGTGAAAAGGTGAGGTGTGAAGCTGCTTGTTCCCACCCAATTCCCTCCAGAGATGGTGGGTGCTGCCCATCGTGCACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301770.10
3UTR CCA 90 bp ACAGCCTGTGCACGATGGGCAGCACCCACCATCTCTGGAGGGAATTaGGTGGGAACAAGCAGCTTCACACCTCACCTTTTCACAGGTCAC +
Preference number: 1 (lower is better)
Translates to: TACARWAAPTISGGN*VGTSSFTPHLFTGH
Trigger: GTGACCTGTGAAAAGGTGAGGTGTGAAGCTGCTTGTTCCCACCCAATTCCCTCCAGAGATGGTGGGTGCTGCCCATCGTGCACAGGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301770.10
3UTR TCA 90 bp CCTGGGAAAGTGGCTGTCAGCCCCAAAGCGAGTGAGTGTGGACCATaGGCTCCTGCCGGGCTTGTAGGTAAAGTCTGTGTTTTCATCAAG +
Preference number: 1 (lower is better)
Translates to: PGKVAVSPKASECGP*APAGLVGKVCVFIK
Trigger: CTTGATGAAAACACAGACTTTACCTACAAGCCCGGCAGGAGCTCATGGTCCACACTCACTCGCTTTGGGGCTGACAGCCACTTTCCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301770.10
3UTR CCA 90 bp CACTGTGAAAACAGCCTGTGCACGATGGGCAGCACCCACCATCTCTaGAGGGAATTGGGTGGGAACAAGCAGCTTCACACCTCACCTTTT +
Preference number: 1 (lower is better)
Translates to: HCENSLCTMGSTHHL*RELGGNKQLHTSPF
Trigger: AAAAGGTGAGGTGTGAAGCTGCTTGTTCCCACCCAATTCCCTCCAGAGATGGTGGGTGCTGCCCATCGTGCACAGGCTGTTTTCACAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301770.10
3UTR CCA 90 bp AGGACACGTTTCCAGCCAGACAGACACAGACGGTGCAGTTCTCATTaGGAGGTGAAAACACATCCCCTTCAGCTCGGACGACACCACTGT +
Preference number: 1 (lower is better)
Translates to: RTRFQPDRHRRCSSH*EVKTHPLQLGRHHC
Trigger: ACAGTGGTGTCGTCCGAGCTGAAGGGGATGTGTTTTCACCTCCCAATGAGAACTGCACCGTCTGTGTCTGTCTGGCTGGAAACGTGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301770.10
3UTR TCA 90 bp GTTTCCAGCCAGACAGACACAGACGGTGCAGTTCTCATTGGGAGGTaGAAACACATCCCCTTCAGCTCGGACGACACCACTGTGAAAACA +
Preference number: 1 (lower is better)
Translates to: VSSQTDTDGAVLIGR*KHIPFSSDDTTVKT
Trigger: TGTTTTCACAGTGGTGTCGTCCGAGCTGAAGGGGATGTGTTTTCACCTCCCAATGAGAACTGCACCGTCTGTGTCTGTCTGGCTGGAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301770.10
3UTR GCA 90 bp GGTTGCCATGAAGGTGGAAGCCAGTTCGACAGGAACACTTGTAGCTaGCAATGCTGTTTTTACATCTCTGCTGACAGGGAGTCCCTAGGC +
Preference number: 1 (lower is better)
Translates to: GCHEGGSQFDRNTCS*QCCFYISADRESLG
Trigger: GCCTAGGGACTCCCTGTCAGCAGAGATGTAAAAACAGCATTGGCAGCTACAAGTGTTCCTGTCGAACTGGCTTCCACCTTCATGGCAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535599.1
3UTR CCA 90 bp TGGAAACGACTTCCTCCATTCTTACAGCACATTCCAAACACTTCTTaGGAACAAGGTTACATCCAGCCTTGGGGGTCTTCCATCCTCACC +
Preference number: 1 (lower is better)
Translates to: WKRLPPFLQHIPNTS*EQGYIQPWGSSILT
Trigger: GGTGAGGATGGAAGACCCCCAAGGCTGGATGTAACCTTGTTCCCAAGAAGTGTTTGGAATGTGCTGTAAGAATGGAGGAAGTCGTTTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
3UTR-3UTR TCA 90 bp AAGGGCTGTGGAGAGTCTAGAGGTGGTGGGAGAAAGCACGCGAGGCCCGAGGAGCCAAGACCCCACCGGTaGCACCGGCCCCTGCCTCCC +
Preference number: 2 (lower is better)
Translates to: KGCGESRGGGRKHARPEEPRPHR*HRPLPP
Trigger: GGGAGGCAGGGGCCGGTGTCACCGGTGGGGTCTTGG...CTCCTCGGGCCTCGCGTGCTTTCTCCCACCACCTCTAGACTCTCCACAGCCCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301770.10
3UTR CAA 90 bp AGGCCGGCCGGCCTCAGGAAGCAACAGAAGCATCTTGGACGGGTGTaGCCGGGGTTGCAGGATGGCAGATGGGGCCAGCACGGCTTTCGG +
Preference number: 2 (lower is better)
Translates to: RPAGLRKQQKHLGRV*PGLQDGRWGQHGFR
Trigger: CCGAAAGCCGTGCTGGCCCCATCTGCCATCCTGCAACCCCGGCAACACCCGTCCAAGATGCTTCTGTTGCTTCCTGAGGCCGGCCGGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301770.10
3UTR-3UTR GCA 90 bp GAGGGCAGGAGTCCACACAGTCTGTCCTCTTGCAGCTCACCGAGCCATCTGCCTGGTGACACCGGCCCCTaGCTCCCCGCCCTGGCAGAT +
Preference number: 2 (lower is better)
Translates to: EGRSPHSLSSCSSPSHLPGDTGP*LPALAD
Trigger: ATCTGCCAGGGCGGGGAGGCAGGGGCCGGTGTCACC...AGGCAGATGGCTCGGTGAGCTGCAAGAGGACAGACTGTGTGGACTCCTGCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301770.10
3UTR-3UTR CCA 90 bp GCAGGAGGGAGCCCAGGCATCCCCACCAGGTTCATCCTTGGAGCTGCCCTGCACCCTGCCTCCCCGCCCTaGCAGATGCATAACTCACAG +
Preference number: 2 (lower is better)
Translates to: AGGSPGIPTRFILGAALHPASPP*QMHNSQ
Trigger: CTGTGAGTTATGCATCTGCCAGGGCGGGGAGGCAGG...GTGCAGGGCAGCTCCAAGGATGAACCTGGTGGGGATGCCTGGGCTCCCTCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301770.10
3UTR-3UTR CCA 90 bp CACGTGCACCGGGTGCAGGGTTCATCATCCAAGGTGAACACCTGGCCATTCGCCGGAGGCAGTAGGCACTaGGGTGGCCAGCAGGGTGGA +
Preference number: 2 (lower is better)
Translates to: HVHRVQGSSSKVNTWPFAGGSRH*GGQQGG
Trigger: TCCACCCTGCTGGCCACCCCAGTGCCTACTGCCTCC...GGCGAATGGCCAGGTGTTCACCTTGGATGATGAACCCTGCACCCGGTGCACGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301770.10
3UTR-3UTR GCA 90 bp ACGCATGACACCTGGCGGTACAGTCCCAGTGAGTGGAATCCCAGCCGGACGCAATCCTTGGAGCTGCCCTaGACACACCCTGGGCCACTG +
Preference number: 2 (lower is better)
Translates to: THDTWRYSPSEWNPSRTQSLELP*THPGPL
Trigger: CAGTGGCCCAGGGTGTGTGCAGGGCAGCTCCAAGGA...TTGCGTCCGGCTGGGATTCCACTCACTGGGACTGTACCGCCAGGTGTCATGCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
3UTR CAA 90 bp GGCCTCAGGAAGCAACAGAAGCATCTTGGACGGGTGTTGCCGGGGTaGCAGGATGGCAGATGGGGCCAGCACGGCTTTCGGGAAAGCTTC +
Preference number: 2 (lower is better)
Translates to: GLRKQQKHLGRVLPG*QDGRWGQHGFRESF
Trigger: GAAGCTTTCCCGAAAGCCGTGCTGGCCCCATCTGCCATCCTGCAACCCCGGCAACACCCGTCCAAGATGCTTCTGTTGCTTCCTGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301770.10
3UTR-3UTR TCA 90 bp CAGAGGTCCTCTCTCCAGAGTCTCCCGGACACAGTGACCTCCTTACATGGTGGAGGGATCCGGATCGGGTaGGGGCAGGAGTCCACACAG +
Preference number: 2 (lower is better)
Translates to: QRSSLQSLPDTVTSLHGGGIRIG*GQESTQ
Trigger: CTGTGTGGACTCCTGCCCTCACCCGATCCGGATCCC...TCCACCATGTAAGGAGGTCACTGTGTCCGGGAGACTCTGGAGAGAGGACCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301770.10
3UTR-3UTR GCA 90 bp CAGAGGTCCTCTCTCCAGAGTCTCCCGGACACAGTGACCTCCTTACATGGTGGACTTCCGTCAGGAGGGTaGCAGGCAGAGGAGGCCACC +
Preference number: 2 (lower is better)
Translates to: QRSSLQSLPDTVTSLHGGLPSGG*QAEEAT
Trigger: GGTGGCCTCCTCTGCCTGGCACCCTCCTGACGGAAG...TCCACCATGTAAGGAGGTCACTGTGTCCGGGAGACTCTGGAGAGAGGACCTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301770.10
3UTR-3UTR TCA 90 bp ACGCGGTCCAGGGAGGATGCTGACAGTGGAAACGACTTCCTCCATTCTTACAGCCGTCACCACCCCCACTaGACACAGCCCCGTCTGCGT +
Preference number: 2 (lower is better)
Translates to: TRSREDADSGNDFLHSYSRHHPH*TQPRLR
Trigger: ACGCAGACGGGGCTGTGTTCAGTGGGGGTGGTGACG...GCTGTAAGAATGGAGGAAGTCGTTTCCACTGTCAGCATCCTCCCTGGACCGCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301770.10
3UTR-3UTR TCA 90 bp AAGGGCTGTGGAGAGTCTAGAGGTGGTGGGAGAAAGCACGCGAGGCCCGAGGAGAATGCCACATTTCCGTaGGGGGAGAGCCCCTGCTTT +
Preference number: 2 (lower is better)
Translates to: KGCGESRGGGRKHARPEENATFP*GESPCF
Trigger: AAAGCAGGGGCTCTCCCCTCACGGAAATGTGGCATT...CTCCTCGGGCCTCGCGTGCTTTCTCCCACCACCTCTAGACTCTCCACAGCCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301770.10
3UTR-3UTR GCA 90 bp TGGGGTCCATCATGGAAAGTGCTGAAGCTTCCGTCAGGAGGGTGCCAGGCAGAGCCCCGCCCTGGCAGATaGATAACTCACAGGGGTCAC +
Preference number: 2 (lower is better)
Translates to: WGPSWKVLKLPSGGCQAEPRPGR*ITHRGH
Trigger: GTGACCCCTGTGAGTTATGCATCTGCCAGGGCGGGG...CTCTGCCTGGCACCCTCCTGACGGAAGCTTCAGCACTTTCCATGATGGACCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000301770.10
3UTR-3UTR CCA 90 bp GCAGGAGGGAGCCCAGGCATCCCCACCAGGTTCATCCTTGGAGCTGCCCTGCACCGGTGCAGTTCTCATTaGGAGGTGAAAACACATCCC +
Preference number: 2 (lower is better)
Translates to: AGGSPGIPTRFILGAALHRCSSH*EVKTHP
Trigger: GGGATGTGTTTTCACCTCCCAATGAGAACTGCACCG...GTGCAGGGCAGCTCCAAGGATGAACCTGGTGGGGATGCCTGGGCTCCCTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301770.10
3UTR-3UTR TCA 90 bp AAGGGCTGTGGAGAGTCTAGAGGTGGTGGGAGAAAGCACGCGAGGCCCGAGGAGTTGTGGCAGGAATGGTaGCAGACTCGCCTCTCCAAT +
Preference number: 2 (lower is better)
Translates to: KGCGESRGGGRKHARPEELWQEW*QTRLSN
Trigger: ATTGGAGAGGCGAGTCTGTCACCATTCCTGCCACAA...CTCCTCGGGCCTCGCGTGCTTTCTCCCACCACCTCTAGACTCTCCACAGCCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301770.10
3UTR-3UTR GCA 90 bp CGGAAACTCAACCCCGTTGTCGTCAAGAGAGCAGCCTGTCGAGGGTGTGGGCTCATGTGCATAGGAAGCTaGCCACGGTGTTGTGGCAGG +
Preference number: 2 (lower is better)
Translates to: RKLNPVVVKRAACRGCGLMCIGS*PRCCGR
Trigger: CCTGCCACAACACCGTGGGCAGCTTCCTATGCACAT...GAGCCCACACCCTCGACAGGCTGCTCTCTTGACGACAACGGGGTTGAGTTTCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301770.10
3UTR-3UTR GCA 90 bp GAGGAATCCTTGGGGTGTATCTACACAGGAGTGCCGGTTGCCATGAAGGTGGAACGGCAGACAGCTGCATaGCCGGCCCACACTCGCACA +
Preference number: 2 (lower is better)
Translates to: EESLGCIYTGVPVAMKVERQTAA*PAHTRT
Trigger: TGTGCGAGTGTGGGCCGGGCATGCAGCTGTCTGCCG...TTCCACCTTCATGGCAACCGGCACTCCTGTGTAGATACACCCCAAGGATTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535599.1
3UTR-3UTR GCA 90 bp TTTTACATCTCTGCTGACAGGGAGTCCCTAGGCATTCGTCAGTGTCTTGGCAGCCGGTCGGCAGACAGCTaGATGCCCGGCCCACACTCG +
Preference number: 2 (lower is better)
Translates to: FYISADRESLGIRQCLGSRSADS*MPGPHS
Trigger: CGAGTGTGGGCCGGGCATGCAGCTGTCTGCCGACCG...GCTGCCAAGACACTGACGAATGCCTAGGGACTCCCTGTCAGCAGAGATGTAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535599.1
3UTR-3UTR CCA 90 bp AATCCCAGCCGGACGCAACTCTTCCTCCAGGAGAACTTGGCAGTCCCAACCCTTTTGCAGGATGGCAGATaGGGCCAGCACGGCTTTCGG +
Preference number: 2 (lower is better)
Translates to: NPSRTQLFLQENLAVPTLLQDGR*GQHGFR
Trigger: CCGAAAGCCGTGCTGGCCCCATCTGCCATCCTGCAA...AAGGGTTGGGACTGCCAAGTTCTCCTGGAGGAAGAGTTGCGTCCGGCTGGGATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301770.10
3UTR-3UTR CCA 90 bp AAGGGCTGTGGAGAGTCTAGAGGTGGTGGGAGAAAGCACGCGAGGCCCGAGGAGTCCAAGGTGAACACCTaGCCATTCGCCACCTTCCTT +
Preference number: 2 (lower is better)
Translates to: KGCGESRGGGRKHARPEESKVNT*PFATFL
Trigger: AAGGAAGGTGGCGAATGGCCAGGTGTTCACCTTGGA...CTCCTCGGGCCTCGCGTGCTTTCTCCCACCACCTCTAGACTCTCCACAGCCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301770.10
3UTR-3UTR CCA 90 bp ACACGTTTCCAGCCAGACAGACACAGACGGTGCAGTTCTCATTGGGAGGTGAAATGGGTAGTCGTGGGGTaGGAGATGGCAGGCGGGTGG +
Preference number: 2 (lower is better)
Translates to: TRFQPDRHRRCSSHWEVKWVVVG*EMAGGW
Trigger: CCACCCGCCTGCCATCTCCCACCCCACGACTACCCA...TTTCACCTCCCAATGAGAACTGCACCGTCTGTGTCTGTCTGGCTGGAAACGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301770.10
3UTR-3UTR GCA 90 bp AGACGGGAAGGTCTCGTTGTTATAGAAGATTCTGCCTGTGTAGGTGCAGCCTGCGAACACAGCCCCGTCTaGGTACCACCGGCCGTGGAA +
Preference number: 2 (lower is better)
Translates to: RREGLVVIEDSACVGAACEHSPV*VPPAVE
Trigger: TTCCACGGCCGGTGGTACGCAGACGGGGCTGTGTTC...GCAGGCTGCACCTACACAGGCAGAATCTTCTATAACAACGAGACCTTCCCGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301770.10
3UTR-3UTR CCA 90 bp AGGTCTCGTTGTTATAGAAGATTCTGCCTGTGTAGGTGCAGCCTGCTGAACAGTGCCGGGGTTGCAGGATaGCAGATGGGGCCAGCACGG +
Preference number: 2 (lower is better)
Translates to: RSRCYRRFCLCRCSLLNSAGVAG*QMGPAR
Trigger: CCGTGCTGGCCCCATCTGCCATCCTGCAACCCCGGC...ACTGTTCAGCAGGCTGCACCTACACAGGCAGAATCTTCTATAACAACGAGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301770.10
3UTR-3UTR CCA 90 bp CAAAAGATGAGCCAGCCACGCGGTCCAGGGAGGATGCTGACAGTGGAAACGACTGCAACAGAAGCATCTTaGACGGGTGTTGCCGGGGTT +
Preference number: 2 (lower is better)
Translates to: QKMSQPRGPGRMLTVETTATEAS*TGVAGV
Trigger: AACCCCGGCAACACCCGTCCAAGATGCTTCTGTTGC...AGTCGTTTCCACTGTCAGCATCCTCCCTGGACCGCGTGGCTGGCTCATCTTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301770.10
3UTR-3UTR CCA 90 bp CCAATCGGAAACTCAACCCCGTTGTCGTCAAGAGAGCAGCCTGTCGAGGGTGTGTCTGGCAAACACAGGTaGTACACTCGTCACCACCCC +
Preference number: 2 (lower is better)
Translates to: PIGNSTPLSSREQPVEGVSGKHR*YTRHHP
Trigger: GGGGTGGTGACGAGTGTACCACCTGTGTTTGCCAGA...CACACCCTCGACAGGCTGCTCTCTTGACGACAACGGGGTTGAGTTTCCGATTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301770.10
3UTR CAA 90 bp AACAGCCTGTGCACGATGGGCAGCACCCACCATCTCTGGAGGGAATaGGGTGGGAACAAGCAGCTTCACACCTCACCTTTTCACAGGTCA +
Preference number: 2 (lower is better)
Translates to: NSLCTMGSTHHLWRE*GGNKQLHTSPFHRS
Trigger: TGACCTGTGAAAAGGTGAGGTGTGAAGCTGCTTGTTCCCACCCAATTCCCTCCAGAGATGGTGGGTGCTGCCCATCGTGCACAGGCTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301770.10
3UTR CAA 90 bp CAGGACACGTTTCCAGCCAGACAGACACAGACGGTGCAGTTCTCATaGGGAGGTGAAAACACATCCCCTTCAGCTCGGACGACACCACTG +
Preference number: 2 (lower is better)
Translates to: QDTFPARQTQTVQFS*GGENTSPSARTTPL
Trigger: CAGTGGTGTCGTCCGAGCTGAAGGGGATGTGTTTTCACCTCCCAATGAGAACTGCACCGTCTGTGTCTGTCTGGCTGGAAACGTGTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301770.10
3UTR-3UTR GCA 90 bp AGGTCTCGTTGTTATAGAAGATTCTGCCTGTGTAGGTGCAGCCTGCTGAACAGTCAGGTGAAGCAACACTaGCCAGGGCCCAGCCGCCAC +
Preference number: 2 (lower is better)
Translates to: RSRCYRRFCLCRCSLLNSQVKQH*PGPSRH
Trigger: GTGGCGGCTGGGCCCTGGGCAGTGTTGCTTCACCTG...ACTGTTCAGCAGGCTGCACCTACACAGGCAGAATCTTCTATAACAACGAGACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301770.10
3UTR-3UTR GCA 90 bp ACGCGGTCCAGGGAGGATGCTGACAGTGGAAACGACTTCCTCCATTCTTACAGCCACAGTCTGTCCTCTTaGAGCTCACCGAGCCATCTG +
Preference number: 2 (lower is better)
Translates to: TRSREDADSGNDFLHSYSHSLSS*SSPSHL
Trigger: CAGATGGCTCGGTGAGCTGCAAGAGGACAGACTGTG...GCTGTAAGAATGGAGGAAGTCGTTTCCACTGTCAGCATCCTCCCTGGACCGCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301770.10
3UTR-3UTR CCA 90 bp CAGAGGTCCTCTCTCCAGAGTCTCCCGGACACAGTGACCTCCTTACATGGTGGATCCACCTCCCCATTCTaGCAAACACAGGTGGTACAC +
Preference number: 2 (lower is better)
Translates to: QRSSLQSLPDTVTSLHGGSTSPF*QTQVVH
Trigger: GTGTACCACCTGTGTTTGCCAGAATGGGGAGGTGGA...TCCACCATGTAAGGAGGTCACTGTGTCCGGGAGACTCTGGAGAGAGGACCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301770.10
3UTR-3UTR TCA 90 bp CCAATCGGAAACTCAACCCCGTTGTCGTCAAGAGAGCAGCCTGTCGAGGGTGTGGTTCTCATTGGGAGGTaGAAACACATCCCCTTCAGC +
Preference number: 2 (lower is better)
Translates to: PIGNSTPLSSREQPVEGVVLIGR*KHIPFS
Trigger: GCTGAAGGGGATGTGTTTTCACCTCCCAATGAGAAC...CACACCCTCGACAGGCTGCTCTCTTGACGACAACGGGGTTGAGTTTCCGATTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301770.10
3UTR-3UTR CCA 90 bp ATGCTGACAGTGGAAACGACTTCCTCCATTCTTACAGCACATTCCAAACACTTCAGGAGGGCTATGTCCTaGGGACAGGGCAGGCCGGCC +
Preference number: 2 (lower is better)
Translates to: MLTVETTSSILTAHSKHFRRAMS*GQGRPA
Trigger: GGCCGGCCTGCCCTGTCCCCAGGACATAGCCCTCCT...GAAGTGTTTGGAATGTGCTGTAAGAATGGAGGAAGTCGTTTCCACTGTCAGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301770.10
3UTR-3UTR TCA 90 bp ATGCTGACAGTGGAAACGACTTCCTCCATTCTTACAGCACATTCCAAACACTTCGGTCAGCTCGGAGCCTaGAGCCAGGTCGGCATGTGC +
Preference number: 2 (lower is better)
Translates to: MLTVETTSSILTAHSKHFGQLGA*SQVGMC
Trigger: GCACATGCCGACCTGGCTTCAGGCTCCGAGCTGACC...GAAGTGTTTGGAATGTGCTGTAAGAATGGAGGAAGTCGTTTCCACTGTCAGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301770.10
3UTR-3UTR TCA 90 bp GAGGAATCCTTGGGGTGTATCTACACAGGAGTGCCGGTTGCCATGAAGGTGGAACAATGTCTGTACACCTaGTGCCAACAGCTGTCTCCG +
Preference number: 2 (lower is better)
Translates to: EESLGCIYTGVPVAMKVEQCLYT*CQQLSP
Trigger: CGGAGACAGCTGTTGGCATCAGGTGTACAGACATTG...TTCCACCTTCATGGCAACCGGCACTCCTGTGTAGATACACCCCAAGGATTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535599.1
3UTR-3UTR TCA 90 bp GTGTATCTACACAGGAGTGCCGGTTGCCATGAAGGTGGAAGCCAGTTCGACAGGTTTTTACATCTCTGCTaGCAGGGAGTCCCTAGGCAT +
Preference number: 2 (lower is better)
Translates to: VYLHRSAGCHEGGSQFDRFLHLC*QGVPRH
Trigger: ATGCCTAGGGACTCCCTGTCAGCAGAGATGTAAAAA...CCTGTCGAACTGGCTTCCACCTTCATGGCAACCGGCACTCCTGTGTAGATACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535599.1
3UTR-3UTR CCA 90 bp CGGAAACTCAACCCCGTTGTCGTCAAGAGAGCAGCCTGTCGAGGGTGTGGGCTCGAAATAGCATCTCACTaGAACACAAGTACAGCAATC +
Preference number: 2 (lower is better)
Translates to: RKLNPVVVKRAACRGCGLEIASH*NTSTAI
Trigger: GATTGCTGTACTTGTGTTCCAGTGAGATGCTATTTC...GAGCCCACACCCTCGACAGGCTGCTCTCTTGACGACAACGGGGTTGAGTTTCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301770.10
3UTR-3UTR TCA 90 bp TCCAAACACTTCTTGGGAACAAGGTTACATCCAGCCTTGGGGGTCTTCCATCCTGTTCATCATCCAAGGTaGACACCTGGCCATTCGCCA +
Preference number: 2 (lower is better)
Translates to: SKHFLGTRLHPALGVFHPVHHPR*TPGHSP
Trigger: TGGCGAATGGCCAGGTGTTCACCTTGGATGATGAAC...AGGATGGAAGACCCCCAAGGCTGGATGTAACCTTGTTCCCAAGAAGTGTTTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000301770.10
3UTR-3UTR GCA 90 bp ATGCTGACAGTGGAAACGACTTCCTCCATTCTTACAGCACATTCCAAACACTTCAGGGTGGGTGGTGGCTaGAAGGGCTGTGGAGAGTCT +
Preference number: 2 (lower is better)
Translates to: MLTVETTSSILTAHSKHFRVGGG*KGCGES
Trigger: AGACTCTCCACAGCCCTTGCAGCCACCACCCACCCT...GAAGTGTTTGGAATGTGCTGTAAGAATGGAGGAAGTCGTTTCCACTGTCAGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301770.10
3UTR-3UTR TCA 90 bp ATGCTGACAGTGGAAACGACTTCCTCCATTCTTACAGCACATTCCAAACACTTCAGTGAGTGTGGACCATaGGCTCCTGCCGGGCTTGTA +
Preference number: 2 (lower is better)
Translates to: MLTVETTSSILTAHSKHFSECGP*APAGLV
Trigger: TACAAGCCCGGCAGGAGCTCATGGTCCACACTCACT...GAAGTGTTTGGAATGTGCTGTAAGAATGGAGGAAGTCGTTTCCACTGTCAGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301770.10
3UTR CAA 90 bp GTGGAAACGACTTCCTCCATTCTTACAGCACATTCCAAACACTTCTaGGGAACAAGGTTACATCCAGCCTTGGGGGTCTTCCATCCTCAC +
Preference number: 2 (lower is better)
Translates to: VETTSSILTAHSKHF*GTRLHPALGVFHPH
Trigger: GTGAGGATGGAAGACCCCCAAGGCTGGATGTAACCTTGTTCCCAAGAAGTGTTTGGAATGTGCTGTAAGAATGGAGGAAGTCGTTTCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
3UTR TCA 72 bp GGCAAACACAGGTGGTACACTCGTCACCACCCCCACTaGACACAGCCCCGTCTGCGTACCACCGGCCGTGGA +
Preference number: 3 (lower is better)
Translates to: GKHRWYTRHHPH*TQPRLRTTGRG
Trigger: TCCACGGCCGGTGGTACGCAGACGGGGCTGTGTTCAGTGGGGGTGGTGACGAGTGTACCACCTGTGTTTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301770.10
3UTR TCA 72 bp AGGAGGCCACCTGGACACTATCTGGGCCCCAGAGGCTaGGAACGAGCGCTCTGGAGTCACAGGAGGTGGCTG +
Preference number: 3 (lower is better)
Translates to: RRPPGHYLGPRG*ERALWSHRRWL
Trigger: CAGCCACCTCCTGTGACTCCAGAGCGCTCGTTCTCAGCCTCTGGGGCCCAGATAGTGTCCAGGTGGCCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301770.10
3UTR GCA 72 bp TGTCTTGGCAGCTGTGGCGGTCGGCAGACAGCTGCATaGCCGGCCCACACTCGCACACAAACCCACCTTCTG +
Preference number: 3 (lower is better)
Translates to: CLGSCGGRQTAA*PAHTRTQTHLL
Trigger: CAGAAGGTGGGTTTGTGTGCGAGTGTGGGCCGGGCATGCAGCTGTCTGCCGACCGCCACAGCTGCCAAGACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535599.1
3UTR GCA 72 bp TCAGTGTCTTGGCAGCTGTGGCGGTCGGCAGACAGCTaGATGCCCGGCCCACACTCGCACACAAACCCACCT +
Preference number: 3 (lower is better)
Translates to: SVSWQLWRSADS*MPGPHSHTNPP
Trigger: AGGTGGGTTTGTGTGCGAGTGTGGGCCGGGCATGCAGCTGTCTGCCGACCGCCACAGCTGCCAAGACACTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535599.1
3UTR CCA 72 bp CAGGCCGGCCGGCCTCAGGAAGCAACAGAAGCATCTTaGACGGGTGTTGCCGGGGTTGCAGGATGGCAGATG +
Preference number: 3 (lower is better)
Translates to: QAGRPQEATEAS*TGVAGVAGWQM
Trigger: CATCTGCCATCCTGCAACCCCGGCAACACCCGTCCAAGATGCTTCTGTTGCTTCCTGAGGCCGGCCGGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301770.10
3UTR-3UTR CAA 90 bp CCTTCTCAAAAGATGAGCCAGCCACGCGGTCCAGGGAGGATGCTGACAGTGGAACGGGTGTTGCCGGGGTaGCAGGATGGCAGATGGGGC +
Preference number: 3 (lower is better)
Translates to: PSQKMSQPRGPGRMLTVERVLPG*QDGRWG
Trigger: GCCCCATCTGCCATCCTGCAACCCCGGCAACACCCG...TTCCACTGTCAGCATCCTCCCTGGACCGCGTGGCTGGCTCATCTTTTGAGAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000301770.10
3UTR TCA 72 bp CTCCCCTGGGAAAGTGGCTGTCAGCCCCAAAGCGAGTaGGTGTGGACCATGAGCTCCTGCCGGGCTTGTAGG +
Preference number: 3 (lower is better)
Translates to: LPWESGCQPQSE*VWTMSSCRACR
Trigger: CCTACAAGCCCGGCAGGAGCTCATGGTCCACACTCACTCGCTTTGGGGCTGACAGCCACTTTCCCAGGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301770.10
3UTR TCA 72 bp GGTCTTCGAGGGGCTGGGGTCCATCATGGAAAGTGCTaGAGCTTCCGTCAGGAGGGTGCCAGGCAGAGGAGG +
Preference number: 3 (lower is better)
Translates to: GLRGAGVHHGKC*SFRQEGARQRR
Trigger: CCTCCTCTGCCTGGCACCCTCCTGACGGAAGCTTCAGCACTTTCCATGATGGACCCCAGCCCCTCGAAGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301770.10
3UTR GCA 72 bp AGCAACAGAAGCATCTTGGACGGGTGTTGCCGGGGTTaGAGGATGGCAGATGGGGCCAGCACGGCTTTCGGG +
Preference number: 3 (lower is better)
Translates to: SNRSILDGCCRG*RMADGASTAFG
Trigger: CCCGAAAGCCGTGCTGGCCCCATCTGCCATCCTGCAACCCCGGCAACACCCGTCCAAGATGCTTCTGTTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301770.10
3UTR GCA 72 bp GCCTCAGGAAGCAACAGAAGCATCTTGGACGGGTGTTaGCGGGGTTGCAGGATGGCAGATGGGGCCAGCACG +
Preference number: 3 (lower is better)
Translates to: ASGSNRSILDGC*RGCRMADGAST
Trigger: CGTGCTGGCCCCATCTGCCATCCTGCAACCCCGGCAACACCCGTCCAAGATGCTTCTGTTGCTTCCTGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301770.10
3UTR CCA 72 bp CTTGGACGGGTGTTGCCGGGGTTGCAGGATGGCAGATaGGGCCAGCACGGCTTTCGGGAAAGCTTCACAGGA +
Preference number: 3 (lower is better)
Translates to: LGRVLPGLQDGR*GQHGFRESFTG
Trigger: TCCTGTGAAGCTTTCCCGAAAGCCGTGCTGGCCCCATCTGCCATCCTGCAACCCCGGCAACACCCGTCCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301770.10
3UTR TCA 72 bp GGAAAGCTTCACAGGACACGCGGTCAGCTCGGAGCCTaGAGCCAGGTCGGCATGTGCATAGGAAGCTGCCCA +
Preference number: 3 (lower is better)
Translates to: GKLHRTRGQLGA*SQVGMCIGSCP
Trigger: TGGGCAGCTTCCTATGCACATGCCGACCTGGCTTCAGGCTCCGAGCTGACCGCGTGTCCTGTGAAGCTTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301770.10
3UTR TCA 72 bp GCACTGGGAACACCCAGGCTCTGTCCAGCGACTCCTTaGTTCATGCATGGCTCCCAGGTGCCAGCAGGGAGA +
Preference number: 3 (lower is better)
Translates to: ALGTPRLCPATP*FMHGSQVPAGR
Trigger: TCTCCCTGCTGGCACCTGGGAGCCATGCATGAATCAAGGAGTCGCTGGACAGAGCCTGGGTGTTCCCAGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301770.10
3UTR TCA 72 bp GGCACGTGCACCGGGTGCAGGGTTCATCATCCAAGGTaGACACCTGGCCATTCGCCACCTTCCTTCCCTCGT +
Preference number: 3 (lower is better)
Translates to: GTCTGCRVHHPR*TPGHSPPSFPR
Trigger: ACGAGGGAAGGAAGGTGGCGAATGGCCAGGTGTTCACCTTGGATGATGAACCCTGCACCCGGTGCACGTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301770.10
3UTR GCA 72 bp ACACTCGTCACCACCCCCACTGAACACAGCCCCGTCTaGGTACCACCGGCCGTGGAAATAGCATCTCACTGG +
Preference number: 3 (lower is better)
Translates to: TLVTTPTEHSPV*VPPAVEIASHW
Trigger: CCAGTGAGATGCTATTTCCACGGCCGGTGGTACGCAGACGGGGCTGTGTTCAGTGGGGGTGGTGACGAGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301770.10
3UTR CCA 72 bp GAAGCATCTTGGACGGGTGTTGCCGGGGTTGCAGGATaGCAGATGGGGCCAGCACGGCTTTCGGGAAAGCTT +
Preference number: 3 (lower is better)
Translates to: EASWTGVAGVAG*QMGPARLSGKL
Trigger: AAGCTTTCCCGAAAGCCGTGCTGGCCCCATCTGCCATCCTGCAACCCCGGCAACACCCGTCCAAGATGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301770.10
3UTR CCA 72 bp GAGACGCATGACACCTGGCGGTACAGTCCCAGTGAGTaGAATCCCAGCCGGACGCAACTCTTCCTCCAGGAG +
Preference number: 3 (lower is better)
Translates to: ETHDTWRYSPSE*NPSRTQLFLQE
Trigger: CTCCTGGAGGAAGAGTTGCGTCCGGCTGGGATTCCACTCACTGGGACTGTACCGCCAGGTGTCATGCGTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
3UTR-3UTR CAA 90 bp CAGCCACGCGGTCCAGGGAGGATGCTGACAGTGGAAACGACTTCCTCCATTCTTCATCTTGGACGGGTGTaGCCGGGGTTGCAGGATGGC +
Preference number: 3 (lower is better)
Translates to: QPRGPGRMLTVETTSSILHLGRV*PGLQDG
Trigger: GCCATCCTGCAACCCCGGCAACACCCGTCCAAGATG...AAGAATGGAGGAAGTCGTTTCCACTGTCAGCATCCTCCCTGGACCGCGTGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301770.10
3UTR TCA 72 bp CCTCAGTGTCTCCATGCAGGCTCCGACCAGCTTTGCTaGATGCCACATTTCCGTGAGGGGAGAGCCCCTGCT +
Preference number: 3 (lower is better)
Translates to: PQCLHAGSDQLC*MPHFREGRAPA
Trigger: AGCAGGGGCTCTCCCCTCACGGAAATGTGGCATTCAGCAAAGCTGGTCGGAGCCTGCATGGAGACACTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301770.10
3UTR-3UTR CAA 90 bp GAGGAATCCTTGGGGTGTATCTACACAGGAGTGCCGGTTGCCATGAAGGTGGAAGCATTCGTCAGTGTCTaGGCAGCTGTGGCGGTCGGC +
Preference number: 3 (lower is better)
Translates to: EESLGCIYTGVPVAMKVEAFVSV*AAVAVG
Trigger: GCCGACCGCCACAGCTGCCAAGACACTGACGAATGC...TTCCACCTTCATGGCAACCGGCACTCCTGTGTAGATACACCCCAAGGATTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535599.1
3UTR CCA 72 bp AACAGCCTGTGCACGATGGGCAGCACCCACCATCTCTaGAGGGAATTGGGTGGGAACAAGCAGCTTCACACC +
Preference number: 3 (lower is better)
Translates to: NSLCTMGSTHHL*RELGGNKQLHT
Trigger: GGTGTGAAGCTGCTTGTTCCCACCCAATTCCCTCCAGAGATGGTGGGTGCTGCCCATCGTGCACAGGCTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301770.10
3UTR TCA 72 bp GTGGCTGTCAGCCCCAAAGCGAGTGAGTGTGGACCATaGGCTCCTGCCGGGCTTGTAGGTAAAGTCTGTGTT +
Preference number: 3 (lower is better)
Translates to: VAVSPKASECGP*APAGLVGKVCV
Trigger: AACACAGACTTTACCTACAAGCCCGGCAGGAGCTCATGGTCCACACTCACTCGCTTTGGGGCTGACAGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301770.10
3UTR CCA 72 bp GCACGATGGGCAGCACCCACCATCTCTGGAGGGAATTaGGTGGGAACAAGCAGCTTCACACCTCACCTTTTC +
Preference number: 3 (lower is better)
Translates to: ARWAAPTISGGN*VGTSSFTPHLF
Trigger: GAAAAGGTGAGGTGTGAAGCTGCTTGTTCCCACCCAATTCCCTCCAGAGATGGTGGGTGCTGCCCATCGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301770.10
3UTR CCA 72 bp ATCCCAGCCGGACGCAACTCTTCCTCCAGGAGAACTTaGCAGTCCCAACCCTTCTCAAAAGATGAGCCAGCC +
Preference number: 3 (lower is better)
Translates to: IPAGRNSSSRRT*QSQPFSKDEPA
Trigger: GGCTGGCTCATCTTTTGAGAAGGGTTGGGACTGCCAAGTTCTCCTGGAGGAAGAGTTGCGTCCGGCTGGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
3UTR TCA 72 bp TTCATCAAGTTCGTTCTTAAAAGGAGCTGGAGGAGATaGAGCACCGGCCTCGAGGGTGATGCTGTCGGGGGC +
Preference number: 3 (lower is better)
Translates to: FIKFVLKRSWRR*STGLEGDAVGG
Trigger: GCCCCCGACAGCATCACCCTCGAGGCCGGTGCTTCATCTCCTCCAGCTCCTTTTAAGAACGAACTTGATGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301770.10
3UTR GCA 72 bp CAGGAGCTACAGTTGACAGGGGCCTCAGTGTCTCCATaGAGGCTCCGACCAGCTTTGCTGAATGCCACATTT +
Preference number: 3 (lower is better)
Translates to: QELQLTGASVSP*RLRPALLNATF
Trigger: AAATGTGGCATTCAGCAAAGCTGGTCGGAGCCTGCATGGAGACACTGAGGCCCCTGTCAACTGTAGCTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301770.10
3UTR CCA 72 bp GATGGGCAGCACCCACCATCTCTGGAGGGAATTGGGTaGGAACAAGCAGCTTCACACCTCACCTTTTCACAG +
Preference number: 3 (lower is better)
Translates to: DGQHPPSLEGIG*EQAASHLTFSQ
Trigger: CTGTGAAAAGGTGAGGTGTGAAGCTGCTTGTTCCCACCCAATTCCCTCCAGAGATGGTGGGTGCTGCCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301770.10
3UTR-3UTR CAA 90 bp ACCTTTAATCAGGAAACCTCAGAGAGACGCATGACACCTGGCGGTACAGTCCCAAGCAACAGAAGCATCTaGGACGGGTGTTGCCGGGGT +
Preference number: 3 (lower is better)
Translates to: TFNQETSERRMTPGGTVPSNRSI*DGCCRG
Trigger: ACCCCGGCAACACCCGTCCAAGATGCTTCTGTTGCT...TGGGACTGTACCGCCAGGTGTCATGCGTCTCTCTGAGGTTTCCTGATTAAAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301770.10
3UTR TCA 72 bp CAGACAGACACAGACGGTGCAGTTCTCATTGGGAGGTaGAAACACATCCCCTTCAGCTCGGACGACACCACT +
Preference number: 3 (lower is better)
Translates to: QTDTDGAVLIGR*KHIPFSSDDTT
Trigger: AGTGGTGTCGTCCGAGCTGAAGGGGATGTGTTTTCACCTCCCAATGAGAACTGCACCGTCTGTGTCTGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301770.10
3UTR GCA 72 bp GCACAGACGGGAAGGTCTCGTTGTTATAGAAGATTCTaGCTGTGTAGGTGCAGCCTGCTGAACAGTCTGGGC +
Preference number: 3 (lower is better)
Translates to: AQTGRSRCYRRF*LCRCSLLNSLG
Trigger: GCCCAGACTGTTCAGCAGGCTGCACCTACACAGGCAGAATCTTCTATAACAACGAGACCTTCCCGTCTGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301770.10
3UTR GCA 72 bp GGAATCCTTGGGGTGTATCTACACAGGAGTGCCGGTTaGCATGAAGGTGGAAGCCAGTTCGACAGGAACACT +
Preference number: 3 (lower is better)
Translates to: GILGVYLHRSAG*HEGGSQFDRNT
Trigger: AGTGTTCCTGTCGAACTGGCTTCCACCTTCATGGCAACCGGCACTCCTGTGTAGATACACCCCAAGGATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535599.1
3UTR CCA 72 bp TTCCAGCCAGACAGACACAGACGGTGCAGTTCTCATTaGGAGGTGAAAACACATCCCCTTCAGCTCGGACGA +
Preference number: 3 (lower is better)
Translates to: FQPDRHRRCSSH*EVKTHPLQLGR
Trigger: TCGTCCGAGCTGAAGGGGATGTGTTTTCACCTCCCAATGAGAACTGCACCGTCTGTGTCTGTCTGGCTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301770.10
3UTR GCA 72 bp TGCAGGACACGTTTCCAGCCAGACAGACACAGACGGTaGAGTTCTCATTGGGAGGTGAAAACACATCCCCTT +
Preference number: 3 (lower is better)
Translates to: CRTRFQPDRHRR*SSHWEVKTHPL
Trigger: AAGGGGATGTGTTTTCACCTCCCAATGAGAACTGCACCGTCTGTGTCTGTCTGGCTGGAAACGTGTCCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301770.10
CDS-3UTR CCA 90 bp CGTCAGTGTCTTGGCAGCTGTGGCGGTCGGCAGACAGCTGCATGCCCGGCCCACGGTGTAGCCTCGGGCTaGTGCCCCCGGCAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: RQCLGSCGGRQTAACPAHGVASG*CPRQQE
Trigger: CTCCTGCTGCCGGGGGCACCAGCCCGAGGCTACACC...GTGGGCCGGGCATGCAGCTGTCTGCCGACCGCCACAGCTGCCAAGACACTGACG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535599.1
CDS-3UTR TCA 90 bp AGACGCATGACACCTGGCGGTACAGTCCCAGTGAGTGGAATCCCAGCCGGACGCGCAGGCGGGTGGTCCTaGCTCCGGCTGGGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: RRMTPGGTVPVSGIPAGRAGGWS*LRLGAL
Trigger: CAGGGCCCCCAGCCGGAGTCAGGACCACCCGCCTGC...GCGTCCGGCTGGGATTCCACTCACTGGGACTGTACCGCCAGGTGTCATGCGTCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR TCA 90 bp CAGGAGGGAGCCCAGGCATCCCCACCAGGTTCATCCTTGGAGCTGCCCTGCACAACGCCGCCCGCCTGCTaGTGCCTCTCCGAGAGGCGC +
Preference number: 4 (lower is better)
Translates to: QEGAQASPPGSSLELPCTTPPAC*CLSERR
Trigger: GCGCCTCTCGGAGAGGCATCAGCAGGCGGGCGGCGT...TGTGCAGGGCAGCTCCAAGGATGAACCTGGTGGGGATGCCTGGGCTCCCTCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335613.10
CDS-3UTR TCA 90 bp GGAATCCCAGCCGGACGCAACTCTTCCTCCAGGAGAACTTGGCAGTCCCAACCCGCAGGCGGGTGGTCCTaGCTCCGGCTGGGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: GIPAGRNSSSRRTWQSQPAGGWS*LRLGAL
Trigger: CAGGGCCCCCAGCCGGAGTCAGGACCACCCGCCTGC...GGGTTGGGACTGCCAAGTTCTCCTGGAGGAAGAGTTGCGTCCGGCTGGGATTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR TCA 90 bp CAGGACACGCGGTCAGCTCGGAGCCTGAAGCCAGGTCGGCATGTGCATAGGAAGCACCGGCCTCGAGGGTaGTGCTGTCGGGGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: QDTRSARSLKPGRHVHRKHRPRG*CCRGPR
Trigger: CCTGGGCCCCCGACAGCATCACCCTCGAGGCCGGTG...CTTCCTATGCACATGCCGACCTGGCTTCAGGCTCCGAGCTGACCGCGTGTCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000301770.10
CDS-3UTR GCA 90 bp AGACGCATGACACCTGGCGGTACAGTCCCAGTGAGTGGAATCCCAGCCGGACGCGTAGCCTCGGGCTGGTaGCCCCGGCAGCAGGAGCGC +
Preference number: 4 (lower is better)
Translates to: RRMTPGGTVPVSGIPAGRVASGW*PRQQER
Trigger: GCGCTCCTGCTGCCGGGGGCACCAGCCCGAGGCTAC...GCGTCCGGCTGGGATTCCACTCACTGGGACTGTACCGCCAGGTGTCATGCGTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301770.10
ENST00000335613.10
CDS-3UTR GCA 90 bp CGTCAGTGTCTTGGCAGCTGTGGCGGTCGGCAGACAGCTGCATGCCCGGCCCACCGGCAGACAGCTGCATaGCCGGCCCACACTCGCACA +
Preference number: 4 (lower is better)
Translates to: RQCLGSCGGRQTAACPAHRQTAA*PAHTRT
Trigger: TGTGCGAGTGTGGGCCGGGCATGCAGCTGTCTGCCG...GTGGGCCGGGCATGCAGCTGTCTGCCGACCGCCACAGCTGCCAAGACACTGACG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535599.1
CDS-3UTR CCA 90 bp GCAGGAGGGAGCCCAGGCATCCCCACCAGGTTCATCCTTGGAGCTGCCCTGCACGGGTGGCCAGCAGGGTaGACAGCAGCCACACAGGGG +
Preference number: 4 (lower is better)
Translates to: AGGSPGIPTRFILGAALHGWPAG*TAATQG
Trigger: CCCCTGTGTGGCTGCTGTCCACCCTGCTGGCCACCC...GTGCAGGGCAGCTCCAAGGATGAACCTGGTGGGGATGCCTGGGCTCCCTCCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR TCA 90 bp TGGCAGCTGTGGCGGTCGGCAGACAGCTGCATGCCCGGCCCACACTCGCACACAACTCGGGCCACCTCCTaGCAGCCTCCATGGTTGCAG +
Preference number: 4 (lower is better)
Translates to: WQLWRSADSCMPGPHSHTTRATS*QPPWLQ
Trigger: CTGCAACCATGGAGGCTGTCAGGAGGTGGCCCGAGT...TGTGTGCGAGTGTGGGCCGGGCATGCAGCTGTCTGCCGACCGCCACAGCTGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535599.1
CDS-3UTR TCA 90 bp TGGGGTCCATCATGGAAAGTGCTGAAGCTTCCGTCAGGAGGGTGCCAGGCAGAGGCAGGCGGGTGGTCCTaGCTCCGGCTGGGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: WGPSWKVLKLPSGGCQAEAGGWS*LRLGAL
Trigger: CAGGGCCCCCAGCCGGAGTCAGGACCACCCGCCTGC...CTCTGCCTGGCACCCTCCTGACGGAAGCTTCAGCACTTTCCATGATGGACCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301770.10
CDS-3UTR TCA 90 bp ACGCATGACACCTGGCGGTACAGTCCCAGTGAGTGGAATCCCAGCCGGACGCAACACCGGCCTCGAGGGTaGTGCTGTCGGGGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: THDTWRYSPSEWNPSRTQHRPRG*CCRGPR
Trigger: CCTGGGCCCCCGACAGCATCACCCTCGAGGCCGGTG...TTGCGTCCGGCTGGGATTCCACTCACTGGGACTGTACCGCCAGGTGTCATGCGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR GCA 90 bp ACCCAGGCTCTGTCCAGCGACTCCTTGATTCATGCATGGCTCCCAGGTGCCAGCGTAGCCTCGGGCTGGTaGCCCCGGCAGCAGGAGCGC +
Preference number: 4 (lower is better)
Translates to: TQALSSDSLIHAWLPGASVASGW*PRQQER
Trigger: GCGCTCCTGCTGCCGGGGGCACCAGCCCGAGGCTAC...GCTGGCACCTGGGAGCCATGCATGAATCAAGGAGTCGCTGGACAGAGCCTGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301770.10
CDS-3UTR CCA 90 bp TGGCAGCTGTGGCGGTCGGCAGACAGCTGCATGCCCGGCCCACACTCGCACACAGTGTCTTGGCAGCTGTaGCGGTCGGCAGACAGCTGC +
Preference number: 4 (lower is better)
Translates to: WQLWRSADSCMPGPHSHTVSWQL*RSADSC
Trigger: GCAGCTGTCTGCCGACCGCCACAGCTGCCAAGACAC...TGTGTGCGAGTGTGGGCCGGGCATGCAGCTGTCTGCCGACCGCCACAGCTGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535599.1
CDS-3UTR CCA 90 bp CAGGAGGGAGCCCAGGCATCCCCACCAGGTTCATCCTTGGAGCTGCCCTGCACAAGGAGGGCTATGTCCTaGGGACAGGGCAGGCCGGCC +
Preference number: 4 (lower is better)
Translates to: QEGAQASPPGSSLELPCTRRAMS*GQGRPA
Trigger: GGCCGGCCTGCCCTGTCCCCAGGACATAGCCCTCCT...TGTGCAGGGCAGCTCCAAGGATGAACCTGGTGGGGATGCCTGGGCTCCCTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR TCA 90 bp GAGTGGAATCCCAGCCGGACGCAACTCTTCCTCCAGGAGAACTTGGCAGTCCCACCAAGACCCCACCGGTaGCACCGGCCCCTGCCTCCC +
Preference number: 4 (lower is better)
Translates to: EWNPSRTQLFLQENLAVPPRPHR*HRPLPP
Trigger: GGGAGGCAGGGGCCGGTGTCACCGGTGGGGTCTTGG...TGGGACTGCCAAGTTCTCCTGGAGGAAGAGTTGCGTCCGGCTGGGATTCCACTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301770.10
CDS-3UTR TCA 90 bp GCAAACACAGGTGGTACACTCGTCACCACCCCCACTGAACACAGCCCCGTCTGCGGTCGAAGGCCCTGGTaGGAGTCGAGGGGAGGCCCC +
Preference number: 4 (lower is better)
Translates to: ANTGGTLVTTPTEHSPVCGRRPW*ESRGGP
Trigger: GGGGCCTCCCCTCGACTCTCACCAGGGCCTTCGACC...GCAGACGGGGCTGTGTTCAGTGGGGGTGGTGACGAGTGTACCACCTGTGTTTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000301770.10
CDS-3UTR TCA 90 bp ACGCATGACACCTGGCGGTACAGTCCCAGTGAGTGGAATCCCAGCCGGACGCAAGAGGCCCGAGGAGGGTaGTGGGGGTCTTCGAGGGGC +
Preference number: 4 (lower is better)
Translates to: THDTWRYSPSEWNPSRTQEARGG*WGSSRG
Trigger: GCCCCTCGAAGACCCCCATCACCCTCCTCGGGCCTC...TTGCGTCCGGCTGGGATTCCACTCACTGGGACTGTACCGCCAGGTGTCATGCGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301770.10
ENST00000335613.10
CDS-3UTR GCA 90 bp CAGGAGGGAGCCCAGGCATCCCCACCAGGTTCATCCTTGGAGCTGCCCTGCACACGGCAGACAGCTGCATaGCCGGCCCACACTCGCACA +
Preference number: 4 (lower is better)
Translates to: QEGAQASPPGSSLELPCTRQTAA*PAHTRT
Trigger: TGTGCGAGTGTGGGCCGGGCATGCAGCTGTCTGCCG...TGTGCAGGGCAGCTCCAAGGATGAACCTGGTGGGGATGCCTGGGCTCCCTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR GCA 90 bp CAGGAGGGAGCCCAGGCATCCCCACCAGGTTCATCCTTGGAGCTGCCCTGCACAGGGTGTTGCCGGGGTTaGAGGATGGCAGATGGGGCC +
Preference number: 4 (lower is better)
Translates to: QEGAQASPPGSSLELPCTGCCRG*RMADGA
Trigger: GGCCCCATCTGCCATCCTGCAACCCCGGCAACACCC...TGTGCAGGGCAGCTCCAAGGATGAACCTGGTGGGGATGCCTGGGCTCCCTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR GCA 90 bp CAGGAGGGAGCCCAGGCATCCCCACCAGGTTCATCCTTGGAGCTGCCCTGCACACAGGTGAAGCAACACTaGCCAGGGCCCAGCCGCCAC +
Preference number: 4 (lower is better)
Translates to: QEGAQASPPGSSLELPCTQVKQH*PGPSRH
Trigger: GTGGCGGCTGGGCCCTGGGCAGTGTTGCTTCACCTG...TGTGCAGGGCAGCTCCAAGGATGAACCTGGTGGGGATGCCTGGGCTCCCTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp AGACGCATGACACCTGGCGGTACAGTCCCAGTGAGTGGAATCCCAGCCGGACGCAGGAGGGCTATGTCCTaGGGACAGGGCAGGCCGGCC +
Preference number: 4 (lower is better)
Translates to: RRMTPGGTVPVSGIPAGRRRAMS*GQGRPA
Trigger: GGCCGGCCTGCCCTGTCCCCAGGACATAGCCCTCCT...GCGTCCGGCTGGGATTCCACTCACTGGGACTGTACCGCCAGGTGTCATGCGTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp CAGGAGGGAGCCCAGGCATCCCCACCAGGTTCATCCTTGGAGCTGCCCTGCACATGGGTAGTCGTGGGGTaGGAGATGGCAGGCGGGTGG +
Preference number: 4 (lower is better)
Translates to: QEGAQASPPGSSLELPCTWVVVG*EMAGGW
Trigger: CCACCCGCCTGCCATCTCCCACCCCACGACTACCCA...TGTGCAGGGCAGCTCCAAGGATGAACCTGGTGGGGATGCCTGGGCTCCCTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp CCTGGGCCACTGGCAGAGGTCCTCTCTCCAGAGTCTCCCGGACACAGTGACCTCCTCACCTCTCCCAGCTaGCACGTGCACCGGGTGCAG +
Preference number: 4 (lower is better)
Translates to: PGPLAEVLSPESPGHSDLLTSPS*HVHRVQ
Trigger: CTGCACCCGGTGCACGTGCCAGCTGGGAGAGGTGAG...GAGGTCACTGTGTCCGGGAGACTCTGGAGAGAGGACCTCTGCCAGTGGCCCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR TCA 90 bp AATCCCAGCCGGACGCAACTCTTCCTCCAGGAGAACTTGGCAGTCCCAACCCTTCACCGGCCTCGAGGGTaGTGCTGTCGGGGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: NPSRTQLFLQENLAVPTLHRPRG*CCRGPR
Trigger: CCTGGGCCCCCGACAGCATCACCCTCGAGGCCGGTG...AAGGGTTGGGACTGCCAAGTTCTCCTGGAGGAAGAGTTGCGTCCGGCTGGGATT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR GCA 90 bp GCCACGCGGTCCAGGGAGGATGCTGACAGTGGAAACGACTTCCTCCATTCTTACCTCTCGGCCGCGAAGTaGCCGGGCGGCTTCCTCCCG +
Preference number: 4 (lower is better)
Translates to: ATRSREDADSGNDFLHSYLSAAK*PGGFLP
Trigger: CGGGAGGAAGCCGCCCGGGCACTTCGCGGCCGAGAG...GTAAGAATGGAGGAAGTCGTTTCCACTGTCAGCATCCTCCCTGGACCGCGTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301770.10
ENST00000335613.10
CDS-3UTR GCA 90 bp CAGCCGGACGCAACTCTTCCTCCAGGAGAACTTGGCAGTCCCAACCCTTCTCAACTCTCGGCCGCGAAGTaGCCGGGCGGCTTCCTCCCG +
Preference number: 4 (lower is better)
Translates to: QPDATLPPGELGSPNPSQLSAAK*PGGFLP
Trigger: CGGGAGGAAGCCGCCCGGGCACTTCGCGGCCGAGAG...TTGAGAAGGGTTGGGACTGCCAAGTTCTCCTGGAGGAAGAGTTGCGTCCGGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301770.10
ENST00000335613.10
CDS-3UTR GCA 90 bp GGAATCCCAGCCGGACGCAACTCTTCCTCCAGGAGAACTTGGCAGTCCCAACCCCGGTCGGCAGACAGCTaGATGCCCGGCCCACACTCG +
Preference number: 4 (lower is better)
Translates to: GIPAGRNSSSRRTWQSQPRSADS*MPGPHS
Trigger: CGAGTGTGGGCCGGGCATGCAGCTGTCTGCCGACCG...GGGTTGGGACTGCCAAGTTCTCCTGGAGGAAGAGTTGCGTCCGGCTGGGATTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR GCA 90 bp TTGGACGGGTGTTGCCGGGGTTGCAGGATGGCAGATGGGGCCAGCACGGCTTTCCTCCCAGCTGGCACGTaGACCGGGTGCAGGGTTCAT +
Preference number: 4 (lower is better)
Translates to: LDGCCRGCRMADGASTAFLPAGT*TGCRVH
Trigger: ATGAACCCTGCACCCGGTGCACGTGCCAGCTGGGAG...GAAAGCCGTGCTGGCCCCATCTGCCATCCTGCAACCCCGGCAACACCCGTCCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301770.10
CDS-3UTR GCA 90 bp GCTGTGGAGAGTCTAGAGGTGGTGGGAGAAAGCACGCGAGGCCCGAGGAGGGTGTCCTTGGAGCTGCCCTaGACACACCCTGGGCCACTG +
Preference number: 4 (lower is better)
Translates to: AVESLEVVGESTRGPRRVSLELP*THPGPL
Trigger: CAGTGGCCCAGGGTGTGTGCAGGGCAGCTCCAAGGA...CACCCTCCTCGGGCCTCGCGTGCTTTCTCCCACCACCTCTAGACTCTCCACAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301770.10
CDS-3UTR CCA 90 bp GAGTGGAATCCCAGCCGGACGCAACTCTTCCTCCAGGAGAACTTGGCAGTCCCAGGTGTAGCCTCGGGCTaGTGCCCCCGGCAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: EWNPSRTQLFLQENLAVPGVASG*CPRQQE
Trigger: CTCCTGCTGCCGGGGGCACCAGCCCGAGGCTACACC...TGGGACTGCCAAGTTCTCCTGGAGGAAGAGTTGCGTCCGGCTGGGATTCCACTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301770.10
ENST00000335613.10
CDS-3UTR CCA 90 bp AGCTGTGGCGGTCGGCAGACAGCTGCATGCCCGGCCCACACTCGCACACAAACCTCCCCACATGGTCCATaGGTTTCTGGGCAGGTGGCC +
Preference number: 4 (lower is better)
Translates to: SCGGRQTAACPAHTRTQTSPHGP*VSGQVA
Trigger: GGCCACCTGCCCAGAAACCCATGGACCATGTGGGGA...GGTTTGTGTGCGAGTGTGGGCCGGGCATGCAGCTGTCTGCCGACCGCCACAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535599.1
CDS-3UTR CCA 90 bp CCAGCCACGCGGTCCAGGGAGGATGCTGACAGTGGAAACGACTTCCTCCATTCTGGTCCTGACTCCGGCTaGGGGCCCTGGAGCCCCAGA +
Preference number: 4 (lower is better)
Translates to: PATRSREDADSGNDFLHSGPDSG*GPWSPR
Trigger: TCTGGGGCTCCAGGGCCCCCAGCCGGAGTCAGGACC...AGAATGGAGGAAGTCGTTTCCACTGTCAGCATCCTCCCTGGACCGCGTGGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp CAGGAGGGAGCCCAGGCATCCCCACCAGGTTCATCCTTGGAGCTGCCCTGCACATCGGCACAGGCCCGCTaGCAGGGAACCTTCTCACAG +
Preference number: 4 (lower is better)
Translates to: QEGAQASPPGSSLELPCTSAQAR*QGTFSQ
Trigger: CTGTGAGAAGGTTCCCTGCCAGCGGGCCTGTGCCGA...TGTGCAGGGCAGCTCCAAGGATGAACCTGGTGGGGATGCCTGGGCTCCCTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp CAGCCGGACGCAACTCTTCCTCCAGGAGAACTTGGCAGTCCCAACCCTTCTCAACCTCGCCCCTCCTCCTaGCGCCGTGGGGAGCGAACC +
Preference number: 4 (lower is better)
Translates to: QPDATLPPGELGSPNPSQPRPSS*RRGERT
Trigger: GGTTCGCTCCCCACGGCGCCAGGAGGAGGGGCGAGG...TTGAGAAGGGTTGGGACTGCCAAGTTCTCCTGGAGGAAGAGTTGCGTCCGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335613.10
CDS-3UTR TCA 90 bp GAGGGCAGGAGTCCACACAGTCTGTCCTCTTGCAGCTCACCGAGCCATCTGCCTGGGATCCGGATCGGGTaGGGGCAGGAGTCCACACAG +
Preference number: 4 (lower is better)
Translates to: EGRSPHSLSSCSSPSHLPGIRIG*GQESTQ
Trigger: CTGTGTGGACTCCTGCCCTCACCCGATCCGGATCCC...AGGCAGATGGCTCGGTGAGCTGCAAGAGGACAGACTGTGTGGACTCCTGCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301770.10
CDS-3UTR TCA 90 bp AGACGCATGACACCTGGCGGTACAGTCCCAGTGAGTGGAATCCCAGCCGGACGCGCGGTACAGTCCCAGTaGGTGGAATCCCAGCCGGAC +
Preference number: 4 (lower is better)
Translates to: RRMTPGGTVPVSGIPAGRAVQSQ*VESQPD
Trigger: GTCCGGCTGGGATTCCACTCACTGGGACTGTACCGC...GCGTCCGGCTGGGATTCCACTCACTGGGACTGTACCGCCAGGTGTCATGCGTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR TCA 90 bp ATTCGTCAGTGTCTTGGCAGCTGTGGCGGTCGGCAGACAGCTGCATGCCCGGCCGAGGAGAAGTGCAGGTaGGACACGAGGAACTGGGGC +
Preference number: 4 (lower is better)
Translates to: IRQCLGSCGGRQTAACPAEEKCR*DTRNWG
Trigger: GCCCCAGTTCCTCGTGTCTCACCTGCACTTCTCCTC...GGCCGGGCATGCAGCTGTCTGCCGACCGCCACAGCTGCCAAGACACTGACGAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535599.1
CDS-3UTR GCA 90 bp GGAATCCCAGCCGGACGCAACTCTTCCTCCAGGAGAACTTGGCAGTCCCAACCCAGGGGCAGGGTGCAGTaGCCACCACCCATAGAGGGC +
Preference number: 4 (lower is better)
Translates to: GIPAGRNSSSRRTWQSQPRGRVQ*PPPIEG
Trigger: GCCCTCTATGGGTGGTGGGCACTGCACCCTGCCCCT...GGGTTGGGACTGCCAAGTTCTCCTGGAGGAAGAGTTGCGTCCGGCTGGGATTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301770.10
ENST00000335613.10
CDS-3UTR GCA 90 bp GCTGTGGAGAGTCTAGAGGTGGTGGGAGAAAGCACGCGAGGCCCGAGGAGGGTGTGGGAGCGATGCAGATaGCACTCCCACAGCCGAAGG +
Preference number: 4 (lower is better)
Translates to: AVESLEVVGESTRGPRRVWERCR*HSHSRR
Trigger: CCTTCGGCTGTGGGAGTGGCATCTGCATCGCTCCCA...CACCCTCCTCGGGCCTCGCGTGCTTTCTCCCACCACCTCTAGACTCTCCACAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301770.10
CDS-3UTR GCA 90 bp TCCCAACCCTTCTCAAAAGATGAGCCAGCCACGCGGTCCAGGGAGGATGCTGACCGGTCGGCAGACAGCTaGATGCCCGGCCCACACTCG +
Preference number: 4 (lower is better)
Translates to: SQPFSKDEPATRSREDADRSADS*MPGPHS
Trigger: CGAGTGTGGGCCGGGCATGCAGCTGTCTGCCGACCG...GTCAGCATCCTCCCTGGACCGCGTGGCTGGCTCATCTTTTGAGAAGGGTTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR GCA 90 bp CCAGCCACGCGGTCCAGGGAGGATGCTGACAGTGGAAACGACTTCCTCCATTCTCGGTCGGCAGACAGCTaGATGCCCGGCCCACACTCG +
Preference number: 4 (lower is better)
Translates to: PATRSREDADSGNDFLHSRSADS*MPGPHS
Trigger: CGAGTGTGGGCCGGGCATGCAGCTGTCTGCCGACCG...AGAATGGAGGAAGTCGTTTCCACTGTCAGCATCCTCCCTGGACCGCGTGGCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR GCA 90 bp CCTGGGCCACTGGCAGAGGTCCTCTCTCCAGAGTCTCCCGGACACAGTGACCTCCCCCGCCCTGGCAGATaGATAACTCACAGGGGTCAC +
Preference number: 4 (lower is better)
Translates to: PGPLAEVLSPESPGHSDLPRPGR*ITHRGH
Trigger: GTGACCCCTGTGAGTTATGCATCTGCCAGGGCGGGG...GAGGTCACTGTGTCCGGGAGACTCTGGAGAGAGGACCTCTGCCAGTGGCCCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301770.10
CDS-3UTR GCA 90 bp CACGTGCACCGGGTGCAGGGTTCATCATCCAAGGTGAACACCTGGCCATTCGCCCTTCCGTCAGGAGGGTaGCAGGCAGAGGAGGCCACC +
Preference number: 4 (lower is better)
Translates to: HVHRVQGSSSKVNTWPFALPSGG*QAEEAT
Trigger: GGTGGCCTCCTCTGCCTGGCACCCTCCTGACGGAAG...GGCGAATGGCCAGGTGTTCACCTTGGATGATGAACCCTGCACCCGGTGCACGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301770.10
CDS-3UTR CCA 90 bp GAGTGGAATCCCAGCCGGACGCAACTCTTCCTCCAGGAGAACTTGGCAGTCCCACCAGAGAGGCAGACGTaGGGGCCCAGTCGGCGTCTC +
Preference number: 4 (lower is better)
Translates to: EWNPSRTQLFLQENLAVPPERQT*GPSRRL
Trigger: GAGACGCCGACTGGGCCCCCACGTCTGCCTCTCTGG...TGGGACTGCCAAGTTCTCCTGGAGGAAGAGTTGCGTCCGGCTGGGATTCCACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301770.10
ENST00000335613.10
CDS-3UTR CCA 90 bp CAGGAGGGAGCCCAGGCATCCCCACCAGGTTCATCCTTGGAGCTGCCCTGCACATGGTCCATGGGTTTCTaGGCAGGTGGCCCCTTGCTC +
Preference number: 4 (lower is better)
Translates to: QEGAQASPPGSSLELPCTWSMGF*AGGPLL
Trigger: GAGCAAGGGGCCACCTGCCCAGAAACCCATGGACCA...TGTGCAGGGCAGCTCCAAGGATGAACCTGGTGGGGATGCCTGGGCTCCCTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp ACGCATGACACCTGGCGGTACAGTCCCAGTGAGTGGAATCCCAGCCGGACGCAATGGGTAGTCGTGGGGTaGGAGATGGCAGGCGGGTGG +
Preference number: 4 (lower is better)
Translates to: THDTWRYSPSEWNPSRTQWVVVG*EMAGGW
Trigger: CCACCCGCCTGCCATCTCCCACCCCACGACTACCCA...TTGCGTCCGGCTGGGATTCCACTCACTGGGACTGTACCGCCAGGTGTCATGCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp CCCAGTGAGTGGAATCCCAGCCGGACGCAACTCTTCCTCCAGGAGAACTTGGCAGGGTGGCCAGCAGGGTaGACAGCAGCCACACAGGGG +
Preference number: 4 (lower is better)
Translates to: PSEWNPSRTQLFLQENLAGWPAG*TAATQG
Trigger: CCCCTGTGTGGCTGCTGTCCACCCTGCTGGCCACCC...TGCCAAGTTCTCCTGGAGGAAGAGTTGCGTCCGGCTGGGATTCCACTCACTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp CAGGACACGCGGTCAGCTCGGAGCCTGAAGCCAGGTCGGCATGTGCATAGGAAGTCGGCACAGGCCCGCTaGCAGGGAACCTTCTCACAG +
Preference number: 4 (lower is better)
Translates to: QDTRSARSLKPGRHVHRKSAQAR*QGTFSQ
Trigger: CTGTGAGAAGGTTCCCTGCCAGCGGGCCTGTGCCGA...CTTCCTATGCACATGCCGACCTGGCTTCAGGCTCCGAGCTGACCGCGTGTCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301770.10
CDS-3UTR TCA 90 bp ATTCGTCAGTGTCTTGGCAGCTGTGGCGGTCGGCAGACAGCTGCATGCCCGGCCGAGTGCCGGTTGCCATaGAGGTGGAAGCCAGTTCGA +
Preference number: 4 (lower is better)
Translates to: IRQCLGSCGGRQTAACPAECRLP*RWKPVR
Trigger: TCGAACTGGCTTCCACCTTCATGGCAACCGGCACTC...GGCCGGGCATGCAGCTGTCTGCCGACCGCCACAGCTGCCAAGACACTGACGAAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535599.1
CDS-3UTR TCA 90 bp CCCAGTGAGTGGAATCCCAGCCGGACGCAACTCTTCCTCCAGGAGAACTTGGCAGGTCAGCTCGGAGCCTaGAGCCAGGTCGGCATGTGC +
Preference number: 4 (lower is better)
Translates to: PSEWNPSRTQLFLQENLAGQLGA*SQVGMC
Trigger: GCACATGCCGACCTGGCTTCAGGCTCCGAGCTGACC...TGCCAAGTTCTCCTGGAGGAAGAGTTGCGTCCGGCTGGGATTCCACTCACTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR TCA 90 bp CCAGCCACGCGGTCCAGGGAGGATGCTGACAGTGGAAACGACTTCCTCCATTCTCGTCACCACCCCCACTaGACACAGCCCCGTCTGCGT +
Preference number: 4 (lower is better)
Translates to: PATRSREDADSGNDFLHSRHHPH*TQPRLR
Trigger: ACGCAGACGGGGCTGTGTTCAGTGGGGGTGGTGACG...AGAATGGAGGAAGTCGTTTCCACTGTCAGCATCCTCCCTGGACCGCGTGGCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR TCA 90 bp AGCCGGACGCAACTCTTCCTCCAGGAGAACTTGGCAGTCCCAACCCTTCTCAAAGGTCGAAGGCCCTGGTaGGAGTCGAGGGGAGGCCCC +
Preference number: 4 (lower is better)
Translates to: SRTQLFLQENLAVPTLLKGRRPW*ESRGGP
Trigger: GGGGCCTCCCCTCGACTCTCACCAGGGCCTTCGACC...TTTGAGAAGGGTTGGGACTGCCAAGTTCTCCTGGAGGAAGAGTTGCGTCCGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301770.10
ENST00000335613.10
CDS-3UTR TCA 90 bp CCTGGGCCACTGGCAGAGGTCCTCTCTCCAGAGTCTCCCGGACACAGTGACCTCGACAGGAGCTACAGTTaGCAGGGGCCTCTGTCTCCA +
Preference number: 4 (lower is better)
Translates to: PGPLAEVLSPESPGHSDLDRSYS*QGPLSP
Trigger: TGGAGACAGAGGCCCCTGTCAACTGTAGCTCCTGTC...GAGGTCACTGTGTCCGGGAGACTCTGGAGAGAGGACCTCTGCCAGTGGCCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613271.4
CDS-3UTR GCA 90 bp CCCAGTGAGTGGAATCCCAGCCGGACGCAACTCTTCCTCCAGGAGAACTTGGCACGGCAGACAGCTGCATaGCCGGCCCACACTCGCACA +
Preference number: 4 (lower is better)
Translates to: PSEWNPSRTQLFLQENLARQTAA*PAHTRT
Trigger: TGTGCGAGTGTGGGCCGGGCATGCAGCTGTCTGCCG...TGCCAAGTTCTCCTGGAGGAAGAGTTGCGTCCGGCTGGGATTCCACTCACTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR GCA 90 bp GCAGGAGGGAGCCCAGGCATCCCCACCAGGTTCATCCTTGGAGCTGCCCTGCACATGTGCATAGGAAGCTaGCCACGGTGTTGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: AGGSPGIPTRFILGAALHMCIGS*PRCCGR
Trigger: CCTGCCACAACACCGTGGGCAGCTTCCTATGCACAT...GTGCAGGGCAGCTCCAAGGATGAACCTGGTGGGGATGCCTGGGCTCCCTCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR GCA 90 bp TCCCAACCCTTCTCAAAAGATGAGCCAGCCACGCGGTCCAGGGAGGATGCTGACGGGTGTTGCCGGGGTTaGAGGATGGCAGATGGGGCC +
Preference number: 4 (lower is better)
Translates to: SQPFSKDEPATRSREDADGCCRG*RMADGA
Trigger: GGCCCCATCTGCCATCCTGCAACCCCGGCAACACCC...GTCAGCATCCTCCCTGGACCGCGTGGCTGGCTCATCTTTTGAGAAGGGTTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR GCA 90 bp ACGCATGACACCTGGCGGTACAGTCCCAGTGAGTGGAATCCCAGCCGGACGCAAGAACACAGCCCCGTCTaGGTACCACCGGCCGTGGAA +
Preference number: 4 (lower is better)
Translates to: THDTWRYSPSEWNPSRTQEHSPV*VPPAVE
Trigger: TTCCACGGCCGGTGGTACGCAGACGGGGCTGTGTTC...TTGCGTCCGGCTGGGATTCCACTCACTGGGACTGTACCGCCAGGTGTCATGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR GCA 90 bp CCCAGTGAGTGGAATCCCAGCCGGACGCAACTCTTCCTCCAGGAGAACTTGGCACAGGTGAAGCAACACTaGCCAGGGCCCAGCCGCCAC +
Preference number: 4 (lower is better)
Translates to: PSEWNPSRTQLFLQENLAQVKQH*PGPSRH
Trigger: GTGGCGGCTGGGCCCTGGGCAGTGTTGCTTCACCTG...TGCCAAGTTCTCCTGGAGGAAGAGTTGCGTCCGGCTGGGATTCCACTCACTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR GCA 90 bp CCTGGGCCACTGGCAGAGGTCCTCTCTCCAGAGTCTCCCGGACACAGTGACCTCAGCCCAGCAGGCAGATaGAGCTCAGACATGGGTCCA +
Preference number: 4 (lower is better)
Translates to: PGPLAEVLSPESPGHSDLSPAGR*SSDMGP
Trigger: TGGACCCATGTCTGAGCTGCATCTGCCTGCTGGGCT...GAGGTCACTGTGTCCGGGAGACTCTGGAGAGAGGACCTCTGCCAGTGGCCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR GCA 90 bp CCGGCCGGCCTCAGGAAGCAACAGAAGCATCTTGGACGGGTGTTGCCGGGGTTGGCCTCAGTGTCTCCATaGAGGCTCCGACCAGCTTTG +
Preference number: 4 (lower is better)
Translates to: PAGLRKQQKHLGRVLPGLASVSP*RLRPAL
Trigger: CAAAGCTGGTCGGAGCCTGCATGGAGACACTGAGGC...CAACCCCGGCAACACCCGTCCAAGATGCTTCTGTTGCTTCCTGAGGCCGGCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301770.10
CDS-3UTR CCA 90 bp TTCTCAAAAGATGAGCCAGCCACGCGGTCCAGGGAGGATGCTGACAGTGGAAACGGTGTAGCCTCGGGCTaGTGCCCCCGGCAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: FSKDEPATRSREDADSGNGVASG*CPRQQE
Trigger: CTCCTGCTGCCGGGGGCACCAGCCCGAGGCTACACC...GTTTCCACTGTCAGCATCCTCCCTGGACCGCGTGGCTGGCTCATCTTTTGAGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301770.10
ENST00000335613.10
CDS-3UTR CCA 90 bp ATTCGTCAGTGTCTTGGCAGCTGTGGCGGTCGGCAGACAGCTGCATGCCCGGCCGCCGTACTCCCCACATaGTCCATGGGTTTCTGGGCA +
Preference number: 4 (lower is better)
Translates to: IRQCLGSCGGRQTAACPAAVLPT*SMGFWA
Trigger: TGCCCAGAAACCCATGGACCATGTGGGGAGTACGGC...GGCCGGGCATGCAGCTGTCTGCCGACCGCCACAGCTGCCAAGACACTGACGAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535599.1
CDS-3UTR CCA 90 bp CCTTCTCAAAAGATGAGCCAGCCACGCGGTCCAGGGAGGATGCTGACAGTGGAAAGGAGGGCTATGTCCTaGGGACAGGGCAGGCCGGCC +
Preference number: 4 (lower is better)
Translates to: PSQKMSQPRGPGRMLTVERRAMS*GQGRPA
Trigger: GGCCGGCCTGCCCTGTCCCCAGGACATAGCCCTCCT...TTCCACTGTCAGCATCCTCCCTGGACCGCGTGGCTGGCTCATCTTTTGAGAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp AATCCCAGCCGGACGCAACTCTTCCTCCAGGAGAACTTGGCAGTCCCAACCCTTGGGTGGCCAGCAGGGTaGACAGCAGCCACACAGGGG +
Preference number: 4 (lower is better)
Translates to: NPSRTQLFLQENLAVPTLGWPAG*TAATQG
Trigger: CCCCTGTGTGGCTGCTGTCCACCCTGCTGGCCACCC...AAGGGTTGGGACTGCCAAGTTCTCCTGGAGGAAGAGTTGCGTCCGGCTGGGATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp AGACGCATGACACCTGGCGGTACAGTCCCAGTGAGTGGAATCCCAGCCGGACGCTCCTCGCACCAGCACTaGGAACACCCAGGCTCTGTC +
Preference number: 4 (lower is better)
Translates to: RRMTPGGTVPVSGIPAGRSSHQH*EHPGSV
Trigger: GACAGAGCCTGGGTGTTCCCAGTGCTGGTGCGAGGA...GCGTCCGGCTGGGATTCCACTCACTGGGACTGTACCGCCAGGTGTCATGCGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp CCTGGGCCACTGGCAGAGGTCCTCTCTCCAGAGTCTCCCGGACACAGTGACCTCACAGCCTGTGCACGATaGGCAGCACCCACCATCTCT +
Preference number: 4 (lower is better)
Translates to: PGPLAEVLSPESPGHSDLTACAR*AAPTIS
Trigger: AGAGATGGTGGGTGCTGCCCATCGTGCACAGGCTGT...GAGGTCACTGTGTCCGGGAGACTCTGGAGAGAGGACCTCTGCCAGTGGCCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp CAGCCGGACGCAACTCTTCCTCCAGGAGAACTTGGCAGTCCCAACCCTTCTCAAGGCCCCAGGCTCCCCTaGGAAAGTGGCTGTCAGCCC +
Preference number: 4 (lower is better)
Translates to: QPDATLPPGELGSPNPSQGPRLP*ESGCQP
Trigger: GGGCTGACAGCCACTTTCCCAGGGGAGCCTGGGGCC...TTGAGAAGGGTTGGGACTGCCAAGTTCTCCTGGAGGAAGAGTTGCGTCCGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp CAGCCACGCGGTCCAGGGAGGATGCTGACAGTGGAAACGACTTCCTCCATTCTTGGCCCCAGGCTCCCCTaGGAAAGTGGCTGTCAGCCC +
Preference number: 4 (lower is better)
Translates to: QPRGPGRMLTVETTSSILGPRLP*ESGCQP
Trigger: GGGCTGACAGCCACTTTCCCAGGGGAGCCTGGGGCC...AAGAATGGAGGAAGTCGTTTCCACTGTCAGCATCCTCCCTGGACCGCGTGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp GCAAACACAGGTGGTACACTCGTCACCACCCCCACTGAACACAGCCCCGTCTGCCACACCCTGGGCCACTaGCAGAGGTCCTCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: ANTGGTLVTTPTEHSPVCHTLGH*QRSSLQ
Trigger: CTGGAGAGAGGACCTCTGCCAGTGGCCCAGGGTGTG...GCAGACGGGGCTGTGTTCAGTGGGGGTGGTGACGAGTGTACCACCTGTGTTTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301770.10
CDS-3UTR TCA 90 bp TCCCAACCCTTCTCAAAAGATGAGCCAGCCACGCGGTCCAGGGAGGATGCTGACACTCGGGCCACCTCCTaGCAGCCTCCATGGTTGCAG +
Preference number: 4 (lower is better)
Translates to: SQPFSKDEPATRSREDADTRATS*QPPWLQ
Trigger: CTGCAACCATGGAGGCTGTCAGGAGGTGGCCCGAGT...GTCAGCATCCTCCCTGGACCGCGTGGCTGGCTCATCTTTTGAGAAGGGTTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR TCA 90 bp CAAAAGATGAGCCAGCCACGCGGTCCAGGGAGGATGCTGACAGTGGAAACGACTGGTCAGCTCGGAGCCTaGAGCCAGGTCGGCATGTGC +
Preference number: 4 (lower is better)
Translates to: QKMSQPRGPGRMLTVETTGQLGA*SQVGMC
Trigger: GCACATGCCGACCTGGCTTCAGGCTCCGAGCTGACC...AGTCGTTTCCACTGTCAGCATCCTCCCTGGACCGCGTGGCTGGCTCATCTTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR TCA 90 bp CAGCCGGACGCAACTCTTCCTCCAGGAGAACTTGGCAGTCCCAACCCTTCTCAACGTCACCACCCCCACTaGACACAGCCCCGTCTGCGT +
Preference number: 4 (lower is better)
Translates to: QPDATLPPGELGSPNPSQRHHPH*TQPRLR
Trigger: ACGCAGACGGGGCTGTGTTCAGTGGGGGTGGTGACG...TTGAGAAGGGTTGGGACTGCCAAGTTCTCCTGGAGGAAGAGTTGCGTCCGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR TCA 90 bp CAAAAGATGAGCCAGCCACGCGGTCCAGGGAGGATGCTGACAGTGGAAACGACTGGGATCCGGATCGGGTaGGGGCAGGAGTCCACACAG +
Preference number: 4 (lower is better)
Translates to: QKMSQPRGPGRMLTVETTGIRIG*GQESTQ
Trigger: CTGTGTGGACTCCTGCCCTCACCCGATCCGGATCCC...AGTCGTTTCCACTGTCAGCATCCTCCCTGGACCGCGTGGCTGGCTCATCTTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR TCA 90 bp ACGCATGACACCTGGCGGTACAGTCCCAGTGAGTGGAATCCCAGCCGGACGCAAGTAGGTGCAGCCTGCTaGACAGTCTGGGCAGCACTG +
Preference number: 4 (lower is better)
Translates to: THDTWRYSPSEWNPSRTQVGAAC*TVWAAL
Trigger: CAGTGCTGCCCAGACTGTTCAGCAGGCTGCACCTAC...TTGCGTCCGGCTGGGATTCCACTCACTGGGACTGTACCGCCAGGTGTCATGCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR TCA 90 bp CAGTCCCAACCCTTCTCAAAAGATGAGCCAGCCACGCGGTCCAGGGAGGATGCTAGGAGCTGGAGGAGATaGAGCACCGGCCTCGAGGGT +
Preference number: 4 (lower is better)
Translates to: QSQPFSKDEPATRSREDARSWRR*STGLEG
Trigger: ACCCTCGAGGCCGGTGCTTCATCTCCTCCAGCTCCT...AGCATCCTCCCTGGACCGCGTGGCTGGCTCATCTTTTGAGAAGGGTTGGGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR GCA 90 bp CAGCCGGACGCAACTCTTCCTCCAGGAGAACTTGGCAGTCCCAACCCTTCTCAACGGCAGACAGCTGCATaGCCGGCCCACACTCGCACA +
Preference number: 4 (lower is better)
Translates to: QPDATLPPGELGSPNPSQRQTAA*PAHTRT
Trigger: TGTGCGAGTGTGGGCCGGGCATGCAGCTGTCTGCCG...TTGAGAAGGGTTGGGACTGCCAAGTTCTCCTGGAGGAAGAGTTGCGTCCGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR GCA 90 bp CCGGCCGGCCTCAGGAAGCAACAGAAGCATCTTGGACGGGTGTTGCCGGGGTTGATGTGCATAGGAAGCTaGCCACGGTGTTGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: PAGLRKQQKHLGRVLPGLMCIGS*PRCCGR
Trigger: CCTGCCACAACACCGTGGGCAGCTTCCTATGCACAT...CAACCCCGGCAACACCCGTCCAAGATGCTTCTGTTGCTTCCTGAGGCCGGCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301770.10
CDS-3UTR GCA 90 bp GCAGGAGGGAGCCCAGGCATCCCCACCAGGTTCATCCTTGGAGCTGCCCTGCACGACACTCAGGAGAGATaGAGGACACGTTTCCAGCCA +
Preference number: 4 (lower is better)
Translates to: AGGSPGIPTRFILGAALHDTQER*RTRFQP
Trigger: TGGCTGGAAACGTGTCCTGCATCTCTCCTGAGTGTC...GTGCAGGGCAGCTCCAAGGATGAACCTGGTGGGGATGCCTGGGCTCCCTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR GCA 90 bp CAAAAGATGAGCCAGCCACGCGGTCCAGGGAGGATGCTGACAGTGGAAACGACTCAGGTGAAGCAACACTaGCCAGGGCCCAGCCGCCAC +
Preference number: 4 (lower is better)
Translates to: QKMSQPRGPGRMLTVETTQVKQH*PGPSRH
Trigger: GTGGCGGCTGGGCCCTGGGCAGTGTTGCTTCACCTG...AGTCGTTTCCACTGTCAGCATCCTCCCTGGACCGCGTGGCTGGCTCATCTTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR GCA 90 bp AGTCCCAACCCTTCTCAAAAGATGAGCCAGCCACGCGGTCCAGGGAGGATGCTGTCCTTGGAGCTGCCCTaGACACACCCTGGGCCACTG +
Preference number: 4 (lower is better)
Translates to: SPNPSQKMSQPRGPGRMLSLELP*THPGPL
Trigger: CAGTGGCCCAGGGTGTGTGCAGGGCAGCTCCAAGGA...CAGCATCCTCCCTGGACCGCGTGGCTGGCTCATCTTTTGAGAAGGGTTGGGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR GCA 90 bp ACCCAGGCTCTGTCCAGCGACTCCTTGATTCATGCATGGCTCCCAGGTGCCAGCGTTCATCCTTGGAGCTaGCCTGCACACACCCTGGGC +
Preference number: 4 (lower is better)
Translates to: TQALSSDSLIHAWLPGASVHPWS*PAHTLG
Trigger: GCCCAGGGTGTGTGCAGGGCAGCTCCAAGGATGAAC...GCTGGCACCTGGGAGCCATGCATGAATCAAGGAGTCGCTGGACAGAGCCTGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301770.10
CDS-3UTR GCA 90 bp GAGGAATCCTTGGGGTGTATCTACACAGGAGTGCCGGTTGCCATGAAGGTGGAACTGGGGCCTCCCGTCTaGCCCTCGGACCAGGGACTG +
Preference number: 4 (lower is better)
Translates to: EESLGCIYTGVPVAMKVELGPPV*PSDQGL
Trigger: CAGTCCCTGGTCCGAGGGGCAGACGGGAGGCCCCAG...TTCCACCTTCATGGCAACCGGCACTCCTGTGTAGATACACCCCAAGGATTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535599.1
CDS-3UTR CCA 90 bp TTGGACGGGTGTTGCCGGGGTTGCAGGATGGCAGATGGGGCCAGCACGGCTTTCGACTCGCCTCTCCAATaGCCTCCGACACTCGTTTAC +
Preference number: 4 (lower is better)
Translates to: LDGCCRGCRMADGASTAFDSPLQ*PPTLVY
Trigger: GTAAACGAGTGTCGGAGGCCATTGGAGAGGCGAGTC...GAAAGCCGTGCTGGCCCCATCTGCCATCCTGCAACCCCGGCAACACCCGTCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301770.10
CDS-3UTR CCA 90 bp CGGAAACTCAACCCCGTTGTCGTCAAGAGAGCAGCCTGTCGAGGGTGTGGGCTCTTGCAGGATGGCAGATaGGGCCAGCACGGCTTTCGG +
Preference number: 4 (lower is better)
Translates to: RKLNPVVVKRAACRGCGLLQDGR*GQHGFR
Trigger: CCGAAAGCCGTGCTGGCCCCATCTGCCATCCTGCAA...GAGCCCACACCCTCGACAGGCTGCTCTCTTGACGACAACGGGGTTGAGTTTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301770.10
CDS-3UTR CCA 90 bp CAGCCACGCGGTCCAGGGAGGATGCTGACAGTGGAAACGACTTCCTCCATTCTTTCGTGGGGTGGGAGATaGCAGGCGGGTGGTCCTGAC +
Preference number: 4 (lower is better)
Translates to: QPRGPGRMLTVETTSSILSWGGR*QAGGPD
Trigger: GTCAGGACCACCCGCCTGCCATCTCCCACCCCACGA...AAGAATGGAGGAAGTCGTTTCCACTGTCAGCATCCTCCCTGGACCGCGTGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp GGAATCCCAGCCGGACGCAACTCTTCCTCCAGGAGAACTTGGCAGTCCCAACCCCAGAAGGGGAGGATGTaGGTAGTCGTGGGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: GIPAGRNSSSRRTWQSQPQKGRM*VVVGWE
Trigger: CTCCCACCCCACGACTACCCACATCCTCCCCTTCTG...GGGTTGGGACTGCCAAGTTCTCCTGGAGGAAGAGTTGCGTCCGGCTGGGATTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp CCTTCTCAAAAGATGAGCCAGCCACGCGGTCCAGGGAGGATGCTGACAGTGGAAGGAGGCAGTAGGCACTaGGGTGGCCAGCAGGGTGGA +
Preference number: 4 (lower is better)
Translates to: PSQKMSQPRGPGRMLTVEGGSRH*GGQQGG
Trigger: TCCACCCTGCTGGCCACCCCAGTGCCTACTGCCTCC...TTCCACTGTCAGCATCCTCCCTGGACCGCGTGGCTGGCTCATCTTTTGAGAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp CCTGGGCCACTGGCAGAGGTCCTCTCTCCAGAGTCTCCCGGACACAGTGACCTCTCCTTGATTCATGCATaGCTCCCAGGTGCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: PGPLAEVLSPESPGHSDLSLIHA*LPGASR
Trigger: CCTGCTGGCACCTGGGAGCCATGCATGAATCAAGGA...GAGGTCACTGTGTCCGGGAGACTCTGGAGAGAGGACCTCTGCCAGTGGCCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp CAGGAGGGAGCCCAGGCATCCCCACCAGGTTCATCCTTGGAGCTGCCCTGCACAAGCACCCACCATCTCTaGAGGGAATTGGGTGGGAAC +
Preference number: 4 (lower is better)
Translates to: QEGAQASPPGSSLELPCTSTHHL*RELGGN
Trigger: GTTCCCACCCAATTCCCTCCAGAGATGGTGGGTGCT...TGTGCAGGGCAGCTCCAAGGATGAACCTGGTGGGGATGCCTGGGCTCCCTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp CAGGAGGGAGCCCAGGCATCCCCACCAGGTTCATCCTTGGAGCTGCCCTGCACATCTGGCAAACACAGGTaGTACACTCGTCACCACCCC +
Preference number: 4 (lower is better)
Translates to: QEGAQASPPGSSLELPCTSGKHR*YTRHHP
Trigger: GGGGTGGTGACGAGTGTACCACCTGTGTTTGCCAGA...TGTGCAGGGCAGCTCCAAGGATGAACCTGGTGGGGATGCCTGGGCTCCCTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp AGACGCATGACACCTGGCGGTACAGTCCCAGTGAGTGGAATCCCAGCCGGACGCCACCAGGTTCATCCTTaGAGCTGCCCTGCACACACC +
Preference number: 4 (lower is better)
Translates to: RRMTPGGTVPVSGIPAGRHQVHP*SCPAHT
Trigger: GGTGTGTGCAGGGCAGCTCCAAGGATGAACCTGGTG...GCGTCCGGCTGGGATTCCACTCACTGGGACTGTACCGCCAGGTGTCATGCGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp TTGGACGGGTGTTGCCGGGGTTGCAGGATGGCAGATGGGGCCAGCACGGCTTTCTACAGTCCCAGTGAGTaGAATCCCAGCCGGACGCAA +
Preference number: 4 (lower is better)
Translates to: LDGCCRGCRMADGASTAFYSPSE*NPSRTQ
Trigger: TTGCGTCCGGCTGGGATTCCACTCACTGGGACTGTA...GAAAGCCGTGCTGGCCCCATCTGCCATCCTGCAACCCCGGCAACACCCGTCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301770.10
3UTR CAA 72 bp AGCACTGGGAACACCCAGGCTCTGTCCAGCGACTCCTaGATTCATGCATGGCTCCCAGGTGCCAGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: STGNTQALSSDS*IHAWLPGASRE
Trigger: CTCCCTGCTGGCACCTGGGAGCCATGCATGAATCAAGGAGTCGCTGGACAGAGCCTGGGTGTTCCCAGTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301770.10
CDS-3UTR TCA 90 bp GCTGTGGAGAGTCTAGAGGTGGTGGGAGAAAGCACGCGAGGCCCGAGGAGGGTGCAATGTCTGTACACCTaGTGCCAACAGCTGTCTCCG +
Preference number: 4 (lower is better)
Translates to: AVESLEVVGESTRGPRRVQCLYT*CQQLSP
Trigger: CGGAGACAGCTGTTGGCATCAGGTGTACAGACATTG...CACCCTCCTCGGGCCTCGCGTGCTTTCTCCCACCACCTCTAGACTCTCCACAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301770.10
CDS-3UTR TCA 90 bp GGAATCCCAGCCGGACGCAACTCTTCCTCCAGGAGAACTTGGCAGTCCCAACCCGAGTGCCGGTTGCCATaGAGGTGGAAGCCAGTTCGA +
Preference number: 4 (lower is better)
Translates to: GIPAGRNSSSRRTWQSQPECRLP*RWKPVR
Trigger: TCGAACTGGCTTCCACCTTCATGGCAACCGGCACTC...GGGTTGGGACTGCCAAGTTCTCCTGGAGGAAGAGTTGCGTCCGGCTGGGATTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR TCA 90 bp TCCCAACCCTTCTCAAAAGATGAGCCAGCCACGCGGTCCAGGGAGGATGCTGACGTAGGTGCAGCCTGCTaGACAGTCTGGGCAGCACTG +
Preference number: 4 (lower is better)
Translates to: SQPFSKDEPATRSREDADVGAAC*TVWAAL
Trigger: CAGTGCTGCCCAGACTGTTCAGCAGGCTGCACCTAC...GTCAGCATCCTCCCTGGACCGCGTGGCTGGCTCATCTTTTGAGAAGGGTTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR TCA 90 bp GGAAACCTCAGAGAGACGCATGACACCTGGCGGTACAGTCCCAGTGAGTGGAATCTGGGCCCCAGAGGCTaGGAACGAGCGCTCTGGAGT +
Preference number: 4 (lower is better)
Translates to: GNLRETHDTWRYSPSEWNLGPRG*ERALWS
Trigger: ACTCCAGAGCGCTCGTTCTCAGCCTCTGGGGCCCAG...ATTCCACTCACTGGGACTGTACCGCCAGGTGTCATGCGTCTCTCTGAGGTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR TCA 90 bp ACCGAGACAACCTTTAATCAGGAAACCTCAGAGAGACGCATGACACCTGGCGGTGAGGCCCGAGGAGGGTaGTGGGGGTCTTCGAGGGGC +
Preference number: 4 (lower is better)
Translates to: TETTFNQETSERRMTPGGEARGG*WGSSRG
Trigger: GCCCCTCGAAGACCCCCATCACCCTCCTCGGGCCTC...ACCGCCAGGTGTCATGCGTCTCTCTGAGGTTTCCTGATTAAAGGTTGTCTCGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301770.10
ENST00000335613.10
CDS-3UTR TCA 90 bp CCCAGTGAGTGGAATCCCAGCCGGACGCAACTCTTCCTCCAGGAGAACTTGGCACCTCAGAGAGACGCATaGCACCTGGCGGTACAGTCC +
Preference number: 4 (lower is better)
Translates to: PSEWNPSRTQLFLQENLAPQRDA*HLAVQS
Trigger: GGACTGTACCGCCAGGTGTCATGCGTCTCTCTGAGG...TGCCAAGTTCTCCTGGAGGAAGAGTTGCGTCCGGCTGGGATTCCACTCACTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR GCA 90 bp GGAATCCCAGCCGGACGCAACTCTTCCTCCAGGAGAACTTGGCAGTCCCAACCCATCTTGGACGGGTGTTaGCGGGGTTGCAGGATGGCA +
Preference number: 4 (lower is better)
Translates to: GIPAGRNSSSRRTWQSQPILDGC*RGCRMA
Trigger: TGCCATCCTGCAACCCCGGCAACACCCGTCCAAGAT...GGGTTGGGACTGCCAAGTTCTCCTGGAGGAAGAGTTGCGTCCGGCTGGGATTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR GCA 90 bp ACGCATGACACCTGGCGGTACAGTCCCAGTGAGTGGAATCCCAGCCGGACGCAAGCTCACCGAGCCATCTaGCTGGAGGAAGGAGGAACT +
Preference number: 4 (lower is better)
Translates to: THDTWRYSPSEWNPSRTQAHRAI*LEEGGT
Trigger: AGTTCCTCCTTCCTCCAGGCAGATGGCTCGGTGAGC...TTGCGTCCGGCTGGGATTCCACTCACTGGGACTGTACCGCCAGGTGTCATGCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301770.10
CDS-3UTR GCA 90 bp AGACGCATGACACCTGGCGGTACAGTCCCAGTGAGTGGAATCCCAGCCGGACGCCACAGTCTGTCCTCTTaGAGCTCACCGAGCCATCTG +
Preference number: 4 (lower is better)
Translates to: RRMTPGGTVPVSGIPAGRHSLSS*SSPSHL
Trigger: CAGATGGCTCGGTGAGCTGCAAGAGGACAGACTGTG...GCGTCCGGCTGGGATTCCACTCACTGGGACTGTACCGCCAGGTGTCATGCGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR GCA 90 bp CCTGGGCCACTGGCAGAGGTCCTCTCTCCAGAGTCTCCCGGACACAGTGACCTCTTCTGCCTGTGTAGGTaGAGCCTGCTGAACAGTCTG +
Preference number: 4 (lower is better)
Translates to: PGPLAEVLSPESPGHSDLFCLCR*SLLNSL
Trigger: CAGACTGTTCAGCAGGCTGCACCTACACAGGCAGAA...GAGGTCACTGTGTCCGGGAGACTCTGGAGAGAGGACCTCTGCCAGTGGCCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR GCA 90 bp CAAAAGATGAGCCAGCCACGCGGTCCAGGGAGGATGCTGACAGTGGAAACGACTTCCTTGGAGCTGCCCTaGACACACCCTGGGCCACTG +
Preference number: 4 (lower is better)
Translates to: QKMSQPRGPGRMLTVETTSLELP*THPGPL
Trigger: CAGTGGCCCAGGGTGTGTGCAGGGCAGCTCCAAGGA...AGTCGTTTCCACTGTCAGCATCCTCCCTGGACCGCGTGGCTGGCTCATCTTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp GCAAACACAGGTGGTACACTCGTCACCACCCCCACTGAACACAGCCCCGTCTGCGGCAGGAGCAGACATTaGGAGCGATGCAGATGCCAC +
Preference number: 4 (lower is better)
Translates to: ANTGGTLVTTPTEHSPVCGRSRH*ERCRCH
Trigger: GTGGCATCTGCATCGCTCCCAATGTCTGCTCCTGCC...GCAGACGGGGCTGTGTTCAGTGGGGGTGGTGACGAGTGTACCACCTGTGTTTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301770.10
CDS-3UTR CCA 90 bp CAGTCCCAACCCTTCTCAAAAGATGAGCCAGCCACGCGGTCCAGGGAGGATGCTTCCCCACATGGTCCATaGGTTTCTGGGCAGGTGGCC +
Preference number: 4 (lower is better)
Translates to: QSQPFSKDEPATRSREDASPHGP*VSGQVA
Trigger: GGCCACCTGCCCAGAAACCCATGGACCATGTGGGGA...AGCATCCTCCCTGGACCGCGTGGCTGGCTCATCTTTTGAGAAGGGTTGGGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp CCCAGTGAGTGGAATCCCAGCCGGACGCAACTCTTCCTCCAGGAGAACTTGGCATTGCAGGATGGCAGATaGGGCCAGCACGGCTTTCGG +
Preference number: 4 (lower is better)
Translates to: PSEWNPSRTQLFLQENLALQDGR*GQHGFR
Trigger: CCGAAAGCCGTGCTGGCCCCATCTGCCATCCTGCAA...TGCCAAGTTCTCCTGGAGGAAGAGTTGCGTCCGGCTGGGATTCCACTCACTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp ACCGAGACAACCTTTAATCAGGAAACCTCAGAGAGACGCATGACACCTGGCGGTGGTCCTGACTCCGGCTaGGGGCCCTGGAGCCCCAGA +
Preference number: 4 (lower is better)
Translates to: TETTFNQETSERRMTPGGGPDSG*GPWSPR
Trigger: TCTGGGGCTCCAGGGCCCCCAGCCGGAGTCAGGACC...ACCGCCAGGTGTCATGCGTCTCTCTGAGGTTTCCTGATTAAAGGTTGTCTCGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp TGGGGTCCATCATGGAAAGTGCTGAAGCTTCCGTCAGGAGGGTGCCAGGCAGAGCAGAAGGGGAGGATGTaGGTAGTCGTGGGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: WGPSWKVLKLPSGGCQAEQKGRM*VVVGWE
Trigger: CTCCCACCCCACGACTACCCACATCCTCCCCTTCTG...CTCTGCCTGGCACCCTCCTGACGGAAGCTTCAGCACTTTCCATGATGGACCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000301770.10
CDS-3UTR CCA 90 bp GGAAACCTCAGAGAGACGCATGACACCTGGCGGTACAGTCCCAGTGAGTGGAATGGAGGCAGTAGGCACTaGGGTGGCCAGCAGGGTGGA +
Preference number: 4 (lower is better)
Translates to: GNLRETHDTWRYSPSEWNGGSRH*GGQQGG
Trigger: TCCACCCTGCTGGCCACCCCAGTGCCTACTGCCTCC...ATTCCACTCACTGGGACTGTACCGCCAGGTGTCATGCGTCTCTCTGAGGTTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp CCTGGGCCACTGGCAGAGGTCCTCTCTCCAGAGTCTCCCGGACACAGTGACCTCCTGGAGGGAATTGGGTaGGAACAAGCAGCTTCACAC +
Preference number: 4 (lower is better)
Translates to: PGPLAEVLSPESPGHSDLLEGIG*EQAASH
Trigger: GTGTGAAGCTGCTTGTTCCCACCCAATTCCCTCCAG...GAGGTCACTGTGTCCGGGAGACTCTGGAGAGAGGACCTCTGCCAGTGGCCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp ACCCAGGCTCTGTCCAGCGACTCCTTGATTCATGCATGGCTCCCAGGTGCCAGCACAGCCTGTGCACGATaGGCAGCACCCACCATCTCT +
Preference number: 4 (lower is better)
Translates to: TQALSSDSLIHAWLPGASTACAR*AAPTIS
Trigger: AGAGATGGTGGGTGCTGCCCATCGTGCACAGGCTGT...GCTGGCACCTGGGAGCCATGCATGAATCAAGGAGTCGCTGGACAGAGCCTGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301770.10
CDS-3UTR CCA 90 bp GGAATCCCAGCCGGACGCAACTCTTCCTCCAGGAGAACTTGGCAGTCCCAACCCCACCTGGACACTATCTaGGCCCCAGAGGCTGAGAAC +
Preference number: 4 (lower is better)
Translates to: GIPAGRNSSSRRTWQSQPHLDTI*APEAEN
Trigger: GTTCTCAGCCTCTGGGGCCCAGATAGTGTCCAGGTG...GGGTTGGGACTGCCAAGTTCTCCTGGAGGAAGAGTTGCGTCCGGCTGGGATTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp AGCCGGACGCAACTCTTCCTCCAGGAGAACTTGGCAGTCCCAACCCTTCTCAAAGGCCAGGGTGGGTGGTaGCTGCAAGGGCTGTGGAGA +
Preference number: 4 (lower is better)
Translates to: SRTQLFLQENLAVPTLLKGQGGW*LQGLWR
Trigger: TCTCCACAGCCCTTGCAGCCACCACCCACCCTGGCC...TTTGAGAAGGGTTGGGACTGCCAAGTTCTCCTGGAGGAAGAGTTGCGTCCGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp CAGTCCCAACCCTTCTCAAAAGATGAGCCAGCCACGCGGTCCAGGGAGGATGCTCAGCGATCCCCGAAATaGCACGCAGAGCTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: QSQPFSKDEPATRSREDAQRSPK*HAELSR
Trigger: CCTGCTCAGCTCTGCGTGCCATTTCGGGGATCGCTG...AGCATCCTCCCTGGACCGCGTGGCTGGCTCATCTTTTGAGAAGGGTTGGGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335613.10
3UTR CAA 72 bp GGCGACCAGATCTGTCCAATCGGAAACTCAACCCCGTaGTCGTCAAGAGAGCAGCCTGTCGAGGGTGTGGGC +
Preference number: 4 (lower is better)
Translates to: GDQICPIGNSTP*SSREQPVEGVG
Trigger: GCCCACACCCTCGACAGGCTGCTCTCTTGACGACAACGGGGTTGAGTTTCCGATTGGACAGATCTGGTCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301770.10
CDS-3UTR TCA 90 bp TCCTCCAGGAGAACTTGGCAGTCCCAACCCTTCTCAAAAGATGAGCCAGCCACGACTCGGGCCACCTCCTaGCAGCCTCCATGGTTGCAG +
Preference number: 4 (lower is better)
Translates to: SSRRTWQSQPFSKDEPATTRATS*QPPWLQ
Trigger: CTGCAACCATGGAGGCTGTCAGGAGGTGGCCCGAGT...CGTGGCTGGCTCATCTTTTGAGAAGGGTTGGGACTGCCAAGTTCTCCTGGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR TCA 90 bp CAGCTGTGGCGGTCGGCAGACAGCTGCATGCCCGGCCCACACTCGCACACAAACTTTTTACATCTCTGCTaGCAGGGAGTCCCTAGGCAT +
Preference number: 4 (lower is better)
Translates to: QLWRSADSCMPGPHSHTNFLHLC*QGVPRH
Trigger: ATGCCTAGGGACTCCCTGTCAGCAGAGATGTAAAAA...GTTTGTGTGCGAGTGTGGGCCGGGCATGCAGCTGTCTGCCGACCGCCACAGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535599.1
CDS-3UTR TCA 90 bp AATCAGGAAACCTCAGAGAGACGCATGACACCTGGCGGTACAGTCCCAGTGAGTGGGGGAACAGGCCACTaGGCCCAGCAGGCAGATGCA +
Preference number: 4 (lower is better)
Translates to: NQETSERRMTPGGTVPVSGGTGH*AQQADA
Trigger: TGCATCTGCCTGCTGGGCTCAGTGGCCTGTTCCCCC...ACTCACTGGGACTGTACCGCCAGGTGTCATGCGTCTCTCTGAGGTTTCCTGATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR TCA 90 bp CCCGTCTGCGTACCACCGGCCGTGGAAATAGCATCTCACTGGAACACAAGTACAAAGGGTAGGTACAGGTaGTGGGGCAGTCCACGGGGG +
Preference number: 4 (lower is better)
Translates to: PVCVPPAVEIASHWNTSTKGRYR*WGSPRG
Trigger: CCCCCGTGGACTGCCCCATCACCTGTACCTACCCTT...TGTACTTGTGTTCCAGTGAGATGCTATTTCCACGGCCGGTGGTACGCAGACGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301770.10
CDS-3UTR TCA 90 bp GGAATCCCAGCCGGACGCAACTCTTCCTCCAGGAGAACTTGGCAGTCCCAACCCAATGCCACATTTCCGTaGGGGGAGAGCCCCTGCTTT +
Preference number: 4 (lower is better)
Translates to: GIPAGRNSSSRRTWQSQPNATFP*GESPCF
Trigger: AAAGCAGGGGCTCTCCCCTCACGGAAATGTGGCATT...GGGTTGGGACTGCCAAGTTCTCCTGGAGGAAGAGTTGCGTCCGGCTGGGATTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301770.10
ENST00000335613.10
CDS-3UTR TCA 90 bp CCAATCGGAAACTCAACCCCGTTGTCGTCAAGAGAGCAGCCTGTCGAGGGTGTGCAGCCCCAAAGCGAGTaGGTGTGGACCATGAGCTCC +
Preference number: 4 (lower is better)
Translates to: PIGNSTPLSSREQPVEGVQPQSE*VWTMSS
Trigger: GGAGCTCATGGTCCACACTCACTCGCTTTGGGGCTG...CACACCCTCGACAGGCTGCTCTCTTGACGACAACGGGGTTGAGTTTCCGATTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301770.10
CDS-3UTR TCA 90 bp CAGCCACGCGGTCCAGGGAGGATGCTGACAGTGGAAACGACTTCCTCCATTCTTCAGCCCCAAAGCGAGTaGGTGTGGACCATGAGCTCC +
Preference number: 4 (lower is better)
Translates to: QPRGPGRMLTVETTSSILQPQSE*VWTMSS
Trigger: GGAGCTCATGGTCCACACTCACTCGCTTTGGGGCTG...AAGAATGGAGGAAGTCGTTTCCACTGTCAGCATCCTCCCTGGACCGCGTGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR TCA 90 bp GCCACGCGGTCCAGGGAGGATGCTGACAGTGGAAACGACTTCCTCCATTCTTACCAGCCCCAAAGCGAGTaGGTGTGGACCATGAGCTCC +
Preference number: 4 (lower is better)
Translates to: ATRSREDADSGNDFLHSYQPQSE*VWTMSS
Trigger: GGAGCTCATGGTCCACACTCACTCGCTTTGGGGCTG...GTAAGAATGGAGGAAGTCGTTTCCACTGTCAGCATCCTCCCTGGACCGCGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR TCA 90 bp CAGTCCCAACCCTTCTCAAAAGATGAGCCAGCCACGCGGTCCAGGGAGGATGCTGTCTCCCGGACACAGTaGCCTCCTTACATGGTGGAC +
Preference number: 4 (lower is better)
Translates to: QSQPFSKDEPATRSREDAVSRTQ*PPYMVD
Trigger: GTCCACCATGTAAGGAGGTCACTGTGTCCGGGAGAC...AGCATCCTCCCTGGACCGCGTGGCTGGCTCATCTTTTGAGAAGGGTTGGGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR TCA 90 bp GGAATCCCAGCCGGACGCAACTCTTCCTCCAGGAGAACTTGGCAGTCCCAACCCGTCCAGGGAGGATGCTaGCAGTGGAAACGACTTCCT +
Preference number: 4 (lower is better)
Translates to: GIPAGRNSSSRRTWQSQPVQGGC*QWKRLP
Trigger: AGGAAGTCGTTTCCACTGTCAGCATCCTCCCTGGAC...GGGTTGGGACTGCCAAGTTCTCCTGGAGGAAGAGTTGCGTCCGGCTGGGATTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR TCA 90 bp GGAAACCTCAGAGAGACGCATGACACCTGGCGGTACAGTCCCAGTGAGTGGAATGCGGTACAGTCCCAGTaGGTGGAATCCCAGCCGGAC +
Preference number: 4 (lower is better)
Translates to: GNLRETHDTWRYSPSEWNAVQSQ*VESQPD
Trigger: GTCCGGCTGGGATTCCACTCACTGGGACTGTACCGC...ATTCCACTCACTGGGACTGTACCGCCAGGTGTCATGCGTCTCTCTGAGGTTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR TCA 90 bp CAGCCGGACGCAACTCTTCCTCCAGGAGAACTTGGCAGTCCCAACCCTTCTCAACCTCAGAGAGACGCATaGCACCTGGCGGTACAGTCC +
Preference number: 4 (lower is better)
Translates to: QPDATLPPGELGSPNPSQPQRDA*HLAVQS
Trigger: GGACTGTACCGCCAGGTGTCATGCGTCTCTCTGAGG...TTGAGAAGGGTTGGGACTGCCAAGTTCTCCTGGAGGAAGAGTTGCGTCCGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR GCA 90 bp CATGAAGGTGGAAGCCAGTTCGACAGGAACACTTGTAGCTGCCAATGCTGTTTTGTAGCCTCGGGCTGGTaGCCCCGGCAGCAGGAGCGC +
Preference number: 4 (lower is better)
Translates to: HEGGSQFDRNTCSCQCCFVASGW*PRQQER
Trigger: GCGCTCCTGCTGCCGGGGGCACCAGCCCGAGGCTAC...AAAACAGCATTGGCAGCTACAAGTGTTCCTGTCGAACTGGCTTCCACCTTCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535599.1
CDS-3UTR GCA 90 bp CCTTCTCAAAAGATGAGCCAGCCACGCGGTCCAGGGAGGATGCTGACAGTGGAATGGGAGCGATGCAGATaGCACTCCCACAGCCGAAGG +
Preference number: 4 (lower is better)
Translates to: PSQKMSQPRGPGRMLTVEWERCR*HSHSRR
Trigger: CCTTCGGCTGTGGGAGTGGCATCTGCATCGCTCCCA...TTCCACTGTCAGCATCCTCCCTGGACCGCGTGGCTGGCTCATCTTTTGAGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301770.10
ENST00000335613.10
CDS-3UTR GCA 90 bp CTCGCAGGAGGAGGTTACACATTCGTCAATGTCTGTACACCTGATGCCAACAGCCGGTCGGCAGACAGCTaGATGCCCGGCCCACACTCG +
Preference number: 4 (lower is better)
Translates to: LAGGGYTFVNVCTPDANSRSADS*MPGPHS
Trigger: CGAGTGTGGGCCGGGCATGCAGCTGTCTGCCGACCG...GCTGTTGGCATCAGGTGTACAGACATTGACGAATGTGTAACCTCCTCCTGCGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535599.1
CDS-3UTR GCA 90 bp AATCAGGAAACCTCAGAGAGACGCATGACACCTGGCGGTACAGTCCCAGTGAGTGGGTGTTGCCGGGGTTaGAGGATGGCAGATGGGGCC +
Preference number: 4 (lower is better)
Translates to: NQETSERRMTPGGTVPVSGCCRG*RMADGA
Trigger: GGCCCCATCTGCCATCCTGCAACCCCGGCAACACCC...ACTCACTGGGACTGTACCGCCAGGTGTCATGCGTCTCTCTGAGGTTTCCTGATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR GCA 90 bp ACGCATGACACCTGGCGGTACAGTCCCAGTGAGTGGAATCCCAGCCGGACGCAACACAGTCTGTCCTCTTaGAGCTCACCGAGCCATCTG +
Preference number: 4 (lower is better)
Translates to: THDTWRYSPSEWNPSRTQHSLSS*SSPSHL
Trigger: CAGATGGCTCGGTGAGCTGCAAGAGGACAGACTGTG...TTGCGTCCGGCTGGGATTCCACTCACTGGGACTGTACCGCCAGGTGTCATGCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR GCA 90 bp TTCTCAAAAGATGAGCCAGCCACGCGGTCCAGGGAGGATGCTGACAGTGGAAACCTCCCAGCTGGCACGTaGACCGGGTGCAGGGTTCAT +
Preference number: 4 (lower is better)
Translates to: FSKDEPATRSREDADSGNLPAGT*TGCRVH
Trigger: ATGAACCCTGCACCCGGTGCACGTGCCAGCTGGGAG...GTTTCCACTGTCAGCATCCTCCCTGGACCGCGTGGCTGGCTCATCTTTTGAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp GCAACTCTTCCTCCAGGAGAACTTGGCAGTCCCAACCCTTCTCAAAAGATGAGCCCAGAGAGGCAGACGTaGGGGCCCAGTCGGCGTCTC +
Preference number: 4 (lower is better)
Translates to: ATLPPGELGSPNPSQKMSPERQT*GPSRRL
Trigger: GAGACGCCGACTGGGCCCCCACGTCTGCCTCTCTGG...GCTCATCTTTTGAGAAGGGTTGGGACTGCCAAGTTCTCCTGGAGGAAGAGTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301770.10
ENST00000335613.10
CDS-3UTR CCA 90 bp ACGATGGGCAGCACCCACCATCTCTGGAGGGAATTGGGTGGGAACAAGCAGCTTTGGTCCATGGGTTTCTaGGCAGGTGGCCCCTTGCTC +
Preference number: 4 (lower is better)
Translates to: TMGSTHHLWRELGGNKQLWSMGF*AGGPLL
Trigger: GAGCAAGGGGCCACCTGCCCAGAAACCCATGGACCA...AAGCTGCTTGTTCCCACCCAATTCCCTCCAGAGATGGTGGGTGCTGCCCATCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301770.10
CDS-3UTR CCA 90 bp GCCACGCGGTCCAGGGAGGATGCTGACAGTGGAAACGACTTCCTCCATTCTTACTCCCCACATGGTCCATaGGTTTCTGGGCAGGTGGCC +
Preference number: 4 (lower is better)
Translates to: ATRSREDADSGNDFLHSYSPHGP*VSGQVA
Trigger: GGCCACCTGCCCAGAAACCCATGGACCATGTGGGGA...GTAAGAATGGAGGAAGTCGTTTCCACTGTCAGCATCCTCCCTGGACCGCGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp AGTCCCAACCCTTCTCAAAAGATGAGCCAGCCACGCGGTCCAGGGAGGATGCTGCATTCGTCAGTGTCTTaGCAGCTGTGGCGGTCGGCA +
Preference number: 4 (lower is better)
Translates to: SPNPSQKMSQPRGPGRMLHSSVS*QLWRSA
Trigger: TGCCGACCGCCACAGCTGCCAAGACACTGACGAATG...CAGCATCCTCCCTGGACCGCGTGGCTGGCTCATCTTTTGAGAAGGGTTGGGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp ACCGAGACAACCTTTAATCAGGAAACCTCAGAGAGACGCATGACACCTGGCGGTGCCGGGGTTGCAGGATaGCAGATGGGGCCAGCACGG +
Preference number: 4 (lower is better)
Translates to: TETTFNQETSERRMTPGGAGVAG*QMGPAR
Trigger: CCGTGCTGGCCCCATCTGCCATCCTGCAACCCCGGC...ACCGCCAGGTGTCATGCGTCTCTCTGAGGTTTCCTGATTAAAGGTTGTCTCGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp AATCAGGAAACCTCAGAGAGACGCATGACACCTGGCGGTACAGTCCCAGTGAGTGGAGGCAGTAGGCACTaGGGTGGCCAGCAGGGTGGA +
Preference number: 4 (lower is better)
Translates to: NQETSERRMTPGGTVPVSGGSRH*GGQQGG
Trigger: TCCACCCTGCTGGCCACCCCAGTGCCTACTGCCTCC...ACTCACTGGGACTGTACCGCCAGGTGTCATGCGTCTCTCTGAGGTTTCCTGATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp CAAAAGATGAGCCAGCCACGCGGTCCAGGGAGGATGCTGACAGTGGAAACGACTTCCTCGCACCAGCACTaGGAACACCCAGGCTCTGTC +
Preference number: 4 (lower is better)
Translates to: QKMSQPRGPGRMLTVETTSSHQH*EHPGSV
Trigger: GACAGAGCCTGGGTGTTCCCAGTGCTGGTGCGAGGA...AGTCGTTTCCACTGTCAGCATCCTCCCTGGACCGCGTGGCTGGCTCATCTTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp GAGTGGAATCCCAGCCGGACGCAACTCTTCCTCCAGGAGAACTTGGCAGTCCCAACAGCCTGTGCACGATaGGCAGCACCCACCATCTCT +
Preference number: 4 (lower is better)
Translates to: EWNPSRTQLFLQENLAVPTACAR*AAPTIS
Trigger: AGAGATGGTGGGTGCTGCCCATCGTGCACAGGCTGT...TGGGACTGCCAAGTTCTCCTGGAGGAAGAGTTGCGTCCGGCTGGGATTCCACTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp CAGGAGGGAGCCCAGGCATCCCCACCAGGTTCATCCTTGGAGCTGCCCTGCACACGGTGCAGTTCTCATTaGGAGGTGAAAACACATCCC +
Preference number: 4 (lower is better)
Translates to: QEGAQASPPGSSLELPCTRCSSH*EVKTHP
Trigger: GGGATGTGTTTTCACCTCCCAATGAGAACTGCACCG...TGTGCAGGGCAGCTCCAAGGATGAACCTGGTGGGGATGCCTGGGCTCCCTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp CAGAGGTCCTCTCTCCAGAGTCTCCCGGACACAGTGACCTCCTTACATGGTGGAGAGGGTGTGGGCTCCTaGCAGGTGAAGCAACACTGC +
Preference number: 4 (lower is better)
Translates to: QRSSLQSLPDTVTSLHGGEGVGS*QVKQHC
Trigger: GCAGTGTTGCTTCACCTGCCAGGAGCCCACACCCTC...TCCACCATGTAAGGAGGTCACTGTGTCCGGGAGACTCTGGAGAGAGGACCTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301770.10
CDS-3UTR CCA 90 bp CCTTCTCAAAAGATGAGCCAGCCACGCGGTCCAGGGAGGATGCTGACAGTGGAACCTGCCTCCCCGCCCTaGCAGATGCATAACTCACAG +
Preference number: 4 (lower is better)
Translates to: PSQKMSQPRGPGRMLTVEPASPP*QMHNSQ
Trigger: CTGTGAGTTATGCATCTGCCAGGGCGGGGAGGCAGG...TTCCACTGTCAGCATCCTCCCTGGACCGCGTGGCTGGCTCATCTTTTGAGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301770.10
CDS-3UTR CCA 90 bp GGAATCCCAGCCGGACGCAACTCTTCCTCCAGGAGAACTTGGCAGTCCCAACCCGGCTGGGGTCCATCATaGAAAGTGCTGAAGCTTCCG +
Preference number: 4 (lower is better)
Translates to: GIPAGRNSSSRRTWQSQPGWGPS*KVLKLP
Trigger: CGGAAGCTTCAGCACTTTCCATGATGGACCCCAGCC...GGGTTGGGACTGCCAAGTTCTCCTGGAGGAAGAGTTGCGTCCGGCTGGGATTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp CCCAGTGAGTGGAATCCCAGCCGGACGCAACTCTTCCTCCAGGAGAACTTGGCAGGGTCTTCGAGGGGCTaGGGTCCATCATGGAAAGTG +
Preference number: 4 (lower is better)
Translates to: PSEWNPSRTQLFLQENLAGSSRG*GPSWKV
Trigger: CACTTTCCATGATGGACCCCAGCCCCTCGAAGACCC...TGCCAAGTTCTCCTGGAGGAAGAGTTGCGTCCGGCTGGGATTCCACTCACTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp CCAGCCACGCGGTCCAGGGAGGATGCTGACAGTGGAAACGACTTCCTCCATTCTGAGACGCATGACACCTaGCGGTACAGTCCCAGTGAG +
Preference number: 4 (lower is better)
Translates to: PATRSREDADSGNDFLHSETHDT*RYSPSE
Trigger: CTCACTGGGACTGTACCGCCAGGTGTCATGCGTCTC...AGAATGGAGGAAGTCGTTTCCACTGTCAGCATCCTCCCTGGACCGCGTGGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp CCCAGTGAGTGGAATCCCAGCCGGACGCAACTCTTCCTCCAGGAGAACTTGGCATGTGGGGAGGGTCTCTaGCACCTCGAAGCGAAACAC +
Preference number: 4 (lower is better)
Translates to: PSEWNPSRTQLFLQENLACGEGL*HLEAKH
Trigger: GTGTTTCGCTTCGAGGTGCCAGAGACCCTCCCCACA...TGCCAAGTTCTCCTGGAGGAAGAGTTGCGTCCGGCTGGGATTCCACTCACTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335613.10
CDS-3UTR TCA 90 bp CAGCCGGACGCAACTCTTCCTCCAGGAGAACTTGGCAGTCCCAACCCTTCTCAAGAGTGCCGGTTGCCATaGAGGTGGAAGCCAGTTCGA +
Preference number: 4 (lower is better)
Translates to: QPDATLPPGELGSPNPSQECRLP*RWKPVR
Trigger: TCGAACTGGCTTCCACCTTCATGGCAACCGGCACTC...TTGAGAAGGGTTGGGACTGCCAAGTTCTCCTGGAGGAAGAGTTGCGTCCGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR TCA 90 bp AGTCCCAACCCTTCTCAAAAGATGAGCCAGCCACGCGGTCCAGGGAGGATGCTGTGTCCAGCGACTCCTTaGTTCATGCATGGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: SPNPSQKMSQPRGPGRMLCPATP*FMHGSQ
Trigger: CTGGGAGCCATGCATGAATCAAGGAGTCGCTGGACA...CAGCATCCTCCCTGGACCGCGTGGCTGGCTCATCTTTTGAGAAGGGTTGGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR TCA 90 bp GAGTGGAATCCCAGCCGGACGCAACTCTTCCTCCAGGAGAACTTGGCAGTCCCACGGACGACACCACTGTaGAAACAGCCTGTGCACGAT +
Preference number: 4 (lower is better)
Translates to: EWNPSRTQLFLQENLAVPRTTPL*KQPVHD
Trigger: ATCGTGCACAGGCTGTTTTCACAGTGGTGTCGTCCG...TGGGACTGCCAAGTTCTCCTGGAGGAAGAGTTGCGTCCGGCTGGGATTCCACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR TCA 90 bp ACCTTTAATCAGGAAACCTCAGAGAGACGCATGACACCTGGCGGTACAGTCCCAGGGGGAACAGGCCACTaGGCCCAGCAGGCAGATGCA +
Preference number: 4 (lower is better)
Translates to: TFNQETSERRMTPGGTVPGGTGH*AQQADA
Trigger: TGCATCTGCCTGCTGGGCTCAGTGGCCTGTTCCCCC...TGGGACTGTACCGCCAGGTGTCATGCGTCTCTCTGAGGTTTCCTGATTAAAGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR TCA 90 bp AATCAGGAAACCTCAGAGAGACGCATGACACCTGGCGGTACAGTCCCAGTGAGTAGGAGCTGGAGGAGATaGAGCACCGGCCTCGAGGGT +
Preference number: 4 (lower is better)
Translates to: NQETSERRMTPGGTVPVSRSWRR*STGLEG
Trigger: ACCCTCGAGGCCGGTGCTTCATCTCCTCCAGCTCCT...ACTCACTGGGACTGTACCGCCAGGTGTCATGCGTCTCTCTGAGGTTTCCTGATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR TCA 90 bp GCAAACACAGGTGGTACACTCGTCACCACCCCCACTGAACACAGCCCCGTCTGCCATCATGGAAAGTGCTaGAGCTTCCGTCAGGAGGGT +
Preference number: 4 (lower is better)
Translates to: ANTGGTLVTTPTEHSPVCHHGKC*SFRQEG
Trigger: ACCCTCCTGACGGAAGCTTCAGCACTTTCCATGATG...GCAGACGGGGCTGTGTTCAGTGGGGGTGGTGACGAGTGTACCACCTGTGTTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301770.10
CDS-3UTR TCA 90 bp GGAATCCCAGCCGGACGCAACTCTTCCTCCAGGAGAACTTGGCAGTCCCAACCCCATCATGGAAAGTGCTaGAGCTTCCGTCAGGAGGGT +
Preference number: 4 (lower is better)
Translates to: GIPAGRNSSSRRTWQSQPHHGKC*SFRQEG
Trigger: ACCCTCCTGACGGAAGCTTCAGCACTTTCCATGATG...GGGTTGGGACTGCCAAGTTCTCCTGGAGGAAGAGTTGCGTCCGGCTGGGATTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR TCA 90 bp GAGTGGAATCCCAGCCGGACGCAACTCTTCCTCCAGGAGAACTTGGCAGTCCCAGTCCAGGGAGGATGCTaGCAGTGGAAACGACTTCCT +
Preference number: 4 (lower is better)
Translates to: EWNPSRTQLFLQENLAVPVQGGC*QWKRLP
Trigger: AGGAAGTCGTTTCCACTGTCAGCATCCTCCCTGGAC...TGGGACTGCCAAGTTCTCCTGGAGGAAGAGTTGCGTCCGGCTGGGATTCCACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR TCA 90 bp CAGCCACGCGGTCCAGGGAGGATGCTGACAGTGGAAACGACTTCCTCCATTCTTACCCTTCTCAAAAGATaGGCCAGCCACGCGGTCCAG +
Preference number: 4 (lower is better)
Translates to: QPRGPGRMLTVETTSSILTLLKR*ASHAVQ
Trigger: CTGGACCGCGTGGCTGGCTCATCTTTTGAGAAGGGT...AAGAATGGAGGAAGTCGTTTCCACTGTCAGCATCCTCCCTGGACCGCGTGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR TCA 90 bp ACGCGGTCCAGGGAGGATGCTGACAGTGGAAACGACTTCCTCCATTCTTACAGCCCTCAGAGAGACGCATaGCACCTGGCGGTACAGTCC +
Preference number: 4 (lower is better)
Translates to: TRSREDADSGNDFLHSYSPQRDA*HLAVQS
Trigger: GGACTGTACCGCCAGGTGTCATGCGTCTCTCTGAGG...GCTGTAAGAATGGAGGAAGTCGTTTCCACTGTCAGCATCCTCCCTGGACCGCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR TCA 90 bp CACACAGTGGCCCTCGCAGGAGGAGGTTACACATTCGTCAATGTCTGTACACCTCCTCGGACCAGGGACTaGGGGCTGGCAACACACACT +
Preference number: 4 (lower is better)
Translates to: HTVALAGGGYTFVNVCTPPRTRD*GLATHT
Trigger: AGTGTGTGTTGCCAGCCCTCAGTCCCTGGTCCGAGG...AGGTGTACAGACATTGACGAATGTGTAACCTCCTCCTGCGAGGGCCACTGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535599.1
CDS-3UTR GCA 90 bp GCCACGCGGTCCAGGGAGGATGCTGACAGTGGAAACGACTTCCTCCATTCTTACATCTTGGACGGGTGTTaGCGGGGTTGCAGGATGGCA +
Preference number: 4 (lower is better)
Translates to: ATRSREDADSGNDFLHSYILDGC*RGCRMA
Trigger: TGCCATCCTGCAACCCCGGCAACACCCGTCCAAGAT...GTAAGAATGGAGGAAGTCGTTTCCACTGTCAGCATCCTCCCTGGACCGCGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR GCA 90 bp ACGCATGACACCTGGCGGTACAGTCCCAGTGAGTGGAATCCCAGCCGGACGCAATTCTGCCTGTGTAGGTaGAGCCTGCTGAACAGTCTG +
Preference number: 4 (lower is better)
Translates to: THDTWRYSPSEWNPSRTQFCLCR*SLLNSL
Trigger: CAGACTGTTCAGCAGGCTGCACCTACACAGGCAGAA...TTGCGTCCGGCTGGGATTCCACTCACTGGGACTGTACCGCCAGGTGTCATGCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR GCA 90 bp AGACGCATGACACCTGGCGGTACAGTCCCAGTGAGTGGAATCCCAGCCGGACGCACCAGCTTTGCTGAATaGCACATTTCCGTGAGGGGA +
Preference number: 4 (lower is better)
Translates to: RRMTPGGTVPVSGIPAGRTSFAE*HISVRG
Trigger: TCCCCTCACGGAAATGTGGCATTCAGCAAAGCTGGT...GCGTCCGGCTGGGATTCCACTCACTGGGACTGTACCGCCAGGTGTCATGCGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301770.10
ENST00000335613.10
CDS-3UTR GCA 90 bp TTCTCAAAAGATGAGCCAGCCACGCGGTCCAGGGAGGATGCTGACAGTGGAAACAGGGTGGGTGGTGGCTaGAAGGGCTGTGGAGAGTCT +
Preference number: 4 (lower is better)
Translates to: FSKDEPATRSREDADSGNRVGGG*KGCGES
Trigger: AGACTCTCCACAGCCCTTGCAGCCACCACCCACCCT...GTTTCCACTGTCAGCATCCTCCCTGGACCGCGTGGCTGGCTCATCTTTTGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR GCA 90 bp ACGCGGTCCAGGGAGGATGCTGACAGTGGAAACGACTTCCTCCATTCTTACAGCAGGGTGGGTGGTGGCTaGAAGGGCTGTGGAGAGTCT +
Preference number: 4 (lower is better)
Translates to: TRSREDADSGNDFLHSYSRVGGG*KGCGES
Trigger: AGACTCTCCACAGCCCTTGCAGCCACCACCCACCCT...GCTGTAAGAATGGAGGAAGTCGTTTCCACTGTCAGCATCCTCCCTGGACCGCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR GCA 90 bp GTGTATCTACACAGGAGTGCCGGTTGCCATGAAGGTGGAAGCCAGTTCGACAGGTTACGCAGGGTGCAGTaGCCACCACCCATAGAGGGC +
Preference number: 4 (lower is better)
Translates to: VYLHRSAGCHEGGSQFDRLRRVQ*PPPIEG
Trigger: GCCCTCTATGGGTGGTGGGCACTGCACCCTGCGTAA...CCTGTCGAACTGGCTTCCACCTTCATGGCAACCGGCACTCCTGTGTAGATACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535599.1
CDS-3UTR GCA 90 bp ACGCGGTCCAGGGAGGATGCTGACAGTGGAAACGACTTCCTCCATTCTTACAGCGGGCCTCTGTCTCCATaGAGGCTCCGACCAGCTTTG +
Preference number: 4 (lower is better)
Translates to: TRSREDADSGNDFLHSYSGPLSP*RLRPAL
Trigger: CAAAGCTGGTCGGAGCCTGCATGGAGACAGAGGCCC...GCTGTAAGAATGGAGGAAGTCGTTTCCACTGTCAGCATCCTCCCTGGACCGCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613271.4
CDS-3UTR CCA 90 bp CAGCCGGACGCAACTCTTCCTCCAGGAGAACTTGGCAGTCCCAACCCTTCTCAAGGCAGGAGCAGACATTaGGAGCGATGCAGATGCCAC +
Preference number: 4 (lower is better)
Translates to: QPDATLPPGELGSPNPSQGRSRH*ERCRCH
Trigger: GTGGCATCTGCATCGCTCCCAATGTCTGCTCCTGCC...TTGAGAAGGGTTGGGACTGCCAAGTTCTCCTGGAGGAAGAGTTGCGTCCGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp CCTTCTCAAAAGATGAGCCAGCCACGCGGTCCAGGGAGGATGCTGACAGTGGAACATTCGTCAGTGTCTTaGCAGCTGTGGCGGTCGGCA +
Preference number: 4 (lower is better)
Translates to: PSQKMSQPRGPGRMLTVEHSSVS*QLWRSA
Trigger: TGCCGACCGCCACAGCTGCCAAGACACTGACGAATG...TTCCACTGTCAGCATCCTCCCTGGACCGCGTGGCTGGCTCATCTTTTGAGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp AGCCGGACGCAACTCTTCCTCCAGGAGAACTTGGCAGTCCCAACCCTTCTCAAATTGCAGGATGGCAGATaGGGCCAGCACGGCTTTCGG +
Preference number: 4 (lower is better)
Translates to: SRTQLFLQENLAVPTLLKLQDGR*GQHGFR
Trigger: CCGAAAGCCGTGCTGGCCCCATCTGCCATCCTGCAA...TTTGAGAAGGGTTGGGACTGCCAAGTTCTCCTGGAGGAAGAGTTGCGTCCGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp AACTCTTCCTCCAGGAGAACTTGGCAGTCCCAACCCTTCTCAAAAGATGAGCCAGCCGGGGTTGCAGGATaGCAGATGGGGCCAGCACGG +
Preference number: 4 (lower is better)
Translates to: NSSSRRTWQSQPFSKDEPAGVAG*QMGPAR
Trigger: CCGTGCTGGCCCCATCTGCCATCCTGCAACCCCGGC...TGGCTCATCTTTTGAGAAGGGTTGGGACTGCCAAGTTCTCCTGGAGGAAGAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp TTCTCAAAAGATGAGCCAGCCACGCGGTCCAGGGAGGATGCTGACAGTGGAAACCAGAAGGGGAGGATGTaGGTAGTCGTGGGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: FSKDEPATRSREDADSGNQKGRM*VVVGWE
Trigger: CTCCCACCCCACGACTACCCACATCCTCCCCTTCTG...GTTTCCACTGTCAGCATCCTCCCTGGACCGCGTGGCTGGCTCATCTTTTGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp CAGTCCCAACCCTTCTCAAAAGATGAGCCAGCCACGCGGTCCAGGGAGGATGCTTCCTTGATTCATGCATaGCTCCCAGGTGCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: QSQPFSKDEPATRSREDASLIHA*LPGASR
Trigger: CCTGCTGGCACCTGGGAGCCATGCATGAATCAAGGA...AGCATCCTCCCTGGACCGCGTGGCTGGCTCATCTTTTGAGAAGGGTTGGGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp ACGCATGACACCTGGCGGTACAGTCCCAGTGAGTGGAATCCCAGCCGGACGCAACTGGAGGGAATTGGGTaGGAACAAGCAGCTTCACAC +
Preference number: 4 (lower is better)
Translates to: THDTWRYSPSEWNPSRTQLEGIG*EQAASH
Trigger: GTGTGAAGCTGCTTGTTCCCACCCAATTCCCTCCAG...TTGCGTCCGGCTGGGATTCCACTCACTGGGACTGTACCGCCAGGTGTCATGCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp AGCCGGACGCAACTCTTCCTCCAGGAGAACTTGGCAGTCCCAACCCTTCTCAAAGAGGGTGTGGGCTCCTaGCAGGTGAAGCAACACTGC +
Preference number: 4 (lower is better)
Translates to: SRTQLFLQENLAVPTLLKEGVGS*QVKQHC
Trigger: GCAGTGTTGCTTCACCTGCCAGGAGCCCACACCCTC...TTTGAGAAGGGTTGGGACTGCCAAGTTCTCCTGGAGGAAGAGTTGCGTCCGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp GAGTGGAATCCCAGCCGGACGCAACTCTTCCTCCAGGAGAACTTGGCAGTCCCAGATGCAGCTCAGACATaGGTCCAGCACAGACGGGAA +
Preference number: 4 (lower is better)
Translates to: EWNPSRTQLFLQENLAVPDAAQT*VQHRRE
Trigger: TTCCCGTCTGTGCTGGACCCATGTCTGAGCTGCATC...TGGGACTGCCAAGTTCTCCTGGAGGAAGAGTTGCGTCCGGCTGGGATTCCACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp CAGTCCCAACCCTTCTCAAAAGATGAGCCAGCCACGCGGTCCAGGGAGGATGCTGATGCAGCTCAGACATaGGTCCAGCACAGACGGGAA +
Preference number: 4 (lower is better)
Translates to: QSQPFSKDEPATRSREDADAAQT*VQHRRE
Trigger: TTCCCGTCTGTGCTGGACCCATGTCTGAGCTGCATC...AGCATCCTCCCTGGACCGCGTGGCTGGCTCATCTTTTGAGAAGGGTTGGGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp ACGCATGACACCTGGCGGTACAGTCCCAGTGAGTGGAATCCCAGCCGGACGCAATCCAAGGTGAACACCTaGCCATTCGCCACCTTCCTT +
Preference number: 4 (lower is better)
Translates to: THDTWRYSPSEWNPSRTQSKVNT*PFATFL
Trigger: AAGGAAGGTGGCGAATGGCCAGGTGTTCACCTTGGA...TTGCGTCCGGCTGGGATTCCACTCACTGGGACTGTACCGCCAGGTGTCATGCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp GCCACGCGGTCCAGGGAGGATGCTGACAGTGGAAACGACTTCCTCCATTCTTACCACCTGGACACTATCTaGGCCCCAGAGGCTGAGAAC +
Preference number: 4 (lower is better)
Translates to: ATRSREDADSGNDFLHSYHLDTI*APEAEN
Trigger: GTTCTCAGCCTCTGGGGCCCAGATAGTGTCCAGGTG...GTAAGAATGGAGGAAGTCGTTTCCACTGTCAGCATCCTCCCTGGACCGCGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp CAAAAGATGAGCCAGCCACGCGGTCCAGGGAGGATGCTGACAGTGGAAACGACTCACCAGGTTCATCCTTaGAGCTGCCCTGCACACACC +
Preference number: 4 (lower is better)
Translates to: QKMSQPRGPGRMLTVETTHQVHP*SCPAHT
Trigger: GGTGTGTGCAGGGCAGCTCCAAGGATGAACCTGGTG...AGTCGTTTCCACTGTCAGCATCCTCCCTGGACCGCGTGGCTGGCTCATCTTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp TCCAAACACTTCTTGGGAACAAGGTTACATCCAGCCTTGGGGGTCTTCCATCCTCTCCTCCTGGCGCCGTaGGGAGCGAACCAGCGATCC +
Preference number: 4 (lower is better)
Translates to: SKHFLGTRLHPALGVFHPLLLAP*GANQRS
Trigger: GGATCGCTGGTTCGCTCCCCACGGCGCCAGGAGGAG...AGGATGGAAGACCCCCAAGGCTGGATGTAACCTTGTTCCCAAGAAGTGTTTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000335613.10
CDS-3UTR TCA 90 bp AGTCCCAACCCTTCTCAAAAGATGAGCCAGCCACGCGGTCCAGGGAGGATGCTGTTGTGGCAGGAATGGTaGCAGACTCGCCTCTCCAAT +
Preference number: 4 (lower is better)
Translates to: SPNPSQKMSQPRGPGRMLLWQEW*QTRLSN
Trigger: ATTGGAGAGGCGAGTCTGTCACCATTCCTGCCACAA...CAGCATCCTCCCTGGACCGCGTGGCTGGCTCATCTTTTGAGAAGGGTTGGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR TCA 90 bp CCTTCTCAAAAGATGAGCCAGCCACGCGGTCCAGGGAGGATGCTGACAGTGGAATGTCCAGCGACTCCTTaGTTCATGCATGGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: PSQKMSQPRGPGRMLTVECPATP*FMHGSQ
Trigger: CTGGGAGCCATGCATGAATCAAGGAGTCGCTGGACA...TTCCACTGTCAGCATCCTCCCTGGACCGCGTGGCTGGCTCATCTTTTGAGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR TCA 90 bp CACGTGCACCGGGTGCAGGGTTCATCATCCAAGGTGAACACCTGGCCATTCGCCGTTCTCATTGGGAGGTaGAAACACATCCCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: HVHRVQGSSSKVNTWPFAVLIGR*KHIPFS
Trigger: GCTGAAGGGGATGTGTTTTCACCTCCCAATGAGAAC...GGCGAATGGCCAGGTGTTCACCTTGGATGATGAACCCTGCACCCGGTGCACGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301770.10
CDS-3UTR TCA 90 bp CCCAGTGAGTGGAATCCCAGCCGGACGCAACTCTTCCTCCAGGAGAACTTGGCAGTTCATCATCCAAGGTaGACACCTGGCCATTCGCCA +
Preference number: 4 (lower is better)
Translates to: PSEWNPSRTQLFLQENLAVHHPR*TPGHSP
Trigger: TGGCGAATGGCCAGGTGTTCACCTTGGATGATGAAC...TGCCAAGTTCTCCTGGAGGAAGAGTTGCGTCCGGCTGGGATTCCACTCACTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR TCA 90 bp AGTCCCAACCCTTCTCAAAAGATGAGCCAGCCACGCGGTCCAGGGAGGATGCTGGTTCATCATCCAAGGTaGACACCTGGCCATTCGCCA +
Preference number: 4 (lower is better)
Translates to: SPNPSQKMSQPRGPGRMLVHHPR*TPGHSP
Trigger: TGGCGAATGGCCAGGTGTTCACCTTGGATGATGAAC...CAGCATCCTCCCTGGACCGCGTGGCTGGCTCATCTTTTGAGAAGGGTTGGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR TCA 90 bp ACGATGGGCAGCACCCACCATCTCTGGAGGGAATTGGGTGGGAACAAGCAGCTTAATGCCACATTTCCGTaGGGGGAGAGCCCCTGCTTT +
Preference number: 4 (lower is better)
Translates to: TMGSTHHLWRELGGNKQLNATFP*GESPCF
Trigger: AAAGCAGGGGCTCTCCCCTCACGGAAATGTGGCATT...AAGCTGCTTGTTCCCACCCAATTCCCTCCAGAGATGGTGGGTGCTGCCCATCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301770.10
CDS-3UTR TCA 90 bp TCCCAACCCTTCTCAAAAGATGAGCCAGCCACGCGGTCCAGGGAGGATGCTGACTCCGACCAGCTTTGCTaGATGCCACATTTCCGTGAG +
Preference number: 4 (lower is better)
Translates to: SQPFSKDEPATRSREDADSDQLC*MPHFRE
Trigger: CTCACGGAAATGTGGCATTCAGCAAAGCTGGTCGGA...GTCAGCATCCTCCCTGGACCGCGTGGCTGGCTCATCTTTTGAGAAGGGTTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301770.10
ENST00000335613.10
CDS-3UTR TCA 90 bp AGACGGGAAGGTCTCGTTGTTATAGAAGATTCTGCCTGTGTAGGTGCAGCCTGCAGGAGCTGGAGGAGATaGAGCACCGGCCTCGAGGGT +
Preference number: 4 (lower is better)
Translates to: RREGLVVIEDSACVGAACRSWRR*STGLEG
Trigger: ACCCTCGAGGCCGGTGCTTCATCTCCTCCAGCTCCT...GCAGGCTGCACCTACACAGGCAGAATCTTCTATAACAACGAGACCTTCCCGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301770.10
CDS-3UTR TCA 90 bp ACGCGGTCCAGGGAGGATGCTGACAGTGGAAACGACTTCCTCCATTCTTACAGCAGTGAGTGTGGACCATaGGCTCCTGCCGGGCTTGTA +
Preference number: 4 (lower is better)
Translates to: TRSREDADSGNDFLHSYSSECGP*APAGLV
Trigger: TACAAGCCCGGCAGGAGCTCATGGTCCACACTCACT...GCTGTAAGAATGGAGGAAGTCGTTTCCACTGTCAGCATCCTCCCTGGACCGCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR TCA 90 bp AGCCGGACGCAACTCTTCCTCCAGGAGAACTTGGCAGTCCCAACCCTTCTCAAAAGTGAGTGTGGACCATaGGCTCCTGCCGGGCTTGTA +
Preference number: 4 (lower is better)
Translates to: SRTQLFLQENLAVPTLLKSECGP*APAGLV
Trigger: TACAAGCCCGGCAGGAGCTCATGGTCCACACTCACT...TTTGAGAAGGGTTGGGACTGCCAAGTTCTCCTGGAGGAAGAGTTGCGTCCGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR TCA 90 bp TCCAAACACTTCTTGGGAACAAGGTTACATCCAGCCTTGGGGGTCTTCCATCCTCTGGGCCCCAGAGGCTaGGAACGAGCGCTCTGGAGT +
Preference number: 4 (lower is better)
Translates to: SKHFLGTRLHPALGVFHPLGPRG*ERALWS
Trigger: ACTCCAGAGCGCTCGTTCTCAGCCTCTGGGGCCCAG...AGGATGGAAGACCCCCAAGGCTGGATGTAACCTTGTTCCCAAGAAGTGTTTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR TCA 90 bp GAGTGGAATCCCAGCCGGACGCAACTCTTCCTCCAGGAGAACTTGGCAGTCCCACATCATGGAAAGTGCTaGAGCTTCCGTCAGGAGGGT +
Preference number: 4 (lower is better)
Translates to: EWNPSRTQLFLQENLAVPHHGKC*SFRQEG
Trigger: ACCCTCCTGACGGAAGCTTCAGCACTTTCCATGATG...TGGGACTGCCAAGTTCTCCTGGAGGAAGAGTTGCGTCCGGCTGGGATTCCACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR TCA 90 bp CCCGTCTGCGTACCACCGGCCGTGGAAATAGCATCTCACTGGAACACAAGTACAGTCTCCCGGACACAGTaGCCTCCTTACATGGTGGAC +
Preference number: 4 (lower is better)
Translates to: PVCVPPAVEIASHWNTSTVSRTQ*PPYMVD
Trigger: GTCCACCATGTAAGGAGGTCACTGTGTCCGGGAGAC...TGTACTTGTGTTCCAGTGAGATGCTATTTCCACGGCCGGTGGTACGCAGACGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301770.10
CDS-3UTR TCA 90 bp ACATTCCAAACACTTCTTGGGAACAAGGTTACATCCAGCCTTGGGGGTCTTCCAGGTCGAAGGCCCTGGTaGGAGTCGAGGAGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: TFQTLLGNKVTSSLGGLPGRRPW*ESRRPQ
Trigger: CTGGGGCCTCCTCGACTCTCACCAGGGCCTTCGACC...TGGAAGACCCCCAAGGCTGGATGTAACCTTGTTCCCAAGAAGTGTTTGGAATGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613271.4
CDS-3UTR GCA 90 bp TCACACAGTGGCCCTCGCAGGAGGAGGTTACACATTCGTCAATGTCTGTACACCTGGGAGCGATGCAGATaGCACTCCCACAGCCGAAGG +
Preference number: 4 (lower is better)
Translates to: SHSGPRRRRLHIRQCLYTWERCR*HSHSRR
Trigger: CCTTCGGCTGTGGGAGTGGCATCTGCATCGCTCCCA...GGTGTACAGACATTGACGAATGTGTAACCTCCTCCTGCGAGGGCCACTGTGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535599.1
CDS-3UTR GCA 90 bp GCCACGCGGTCCAGGGAGGATGCTGACAGTGGAAACGACTTCCTCCATTCTTACCGACTCCTTGATTCATaGATGGCTCCCAGGTGCCAG +
Preference number: 4 (lower is better)
Translates to: ATRSREDADSGNDFLHSYRLLDS*MAPRCQ
Trigger: CTGGCACCTGGGAGCCATGCATGAATCAAGGAGTCG...GTAAGAATGGAGGAAGTCGTTTCCACTGTCAGCATCCTCCCTGGACCGCGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR GCA 90 bp AACTCTTCCTCCAGGAGAACTTGGCAGTCCCAACCCTTCTCAAAAGATGAGCCACTTCCGTCAGGAGGGTaGCAGGCAGAGGAGGCCACC +
Preference number: 4 (lower is better)
Translates to: NSSSRRTWQSQPFSKDEPLPSGG*QAEEAT
Trigger: GGTGGCCTCCTCTGCCTGGCACCCTCCTGACGGAAG...TGGCTCATCTTTTGAGAAGGGTTGGGACTGCCAAGTTCTCCTGGAGGAAGAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR GCA 90 bp CACAGGAGTGCCGGTTGCCATGAAGGTGGAAGCCAGTTCGACAGGAACACTTGTCACAGGAGTGCCGGTTaGCATGAAGGTGGAAGCCAG +
Preference number: 4 (lower is better)
Translates to: HRSAGCHEGGSQFDRNTCHRSAG*HEGGSQ
Trigger: CTGGCTTCCACCTTCATGGCAACCGGCACTCCTGTG...ACAAGTGTTCCTGTCGAACTGGCTTCCACCTTCATGGCAACCGGCACTCCTGTG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535599.1
CDS-3UTR CCA 90 bp GTGGCCCTCGCAGGAGGAGGTTACACATTCGTCAATGTCTGTACACCTGATGCCGGCAGGAGCAGACATTaGGAGCGATGCAGATGCCAC +
Preference number: 4 (lower is better)
Translates to: VALAGGGYTFVNVCTPDAGRSRH*ERCRCH
Trigger: GTGGCATCTGCATCGCTCCCAATGTCTGCTCCTGCC...GGCATCAGGTGTACAGACATTGACGAATGTGTAACCTCCTCCTGCGAGGGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535599.1
CDS-3UTR CCA 90 bp GTGGCCCTCGCAGGAGGAGGTTACACATTCGTCAATGTCTGTACACCTGATGCCCATTCGTCAGTGTCTTaGCAGCTGTGGCGGTCGGCA +
Preference number: 4 (lower is better)
Translates to: VALAGGGYTFVNVCTPDAHSSVS*QLWRSA
Trigger: TGCCGACCGCCACAGCTGCCAAGACACTGACGAATG...GGCATCAGGTGTACAGACATTGACGAATGTGTAACCTCCTCCTGCGAGGGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535599.1
CDS-3UTR CCA 90 bp AATCCCAGCCGGACGCAACTCTTCCTCCAGGAGAACTTGGCAGTCCCAACCCTTGACTCGCCTCTCCAATaGCCTCCGACACTCGTTTAC +
Preference number: 4 (lower is better)
Translates to: NPSRTQLFLQENLAVPTLDSPLQ*PPTLVY
Trigger: GTAAACGAGTGTCGGAGGCCATTGGAGAGGCGAGTC...AAGGGTTGGGACTGCCAAGTTCTCCTGGAGGAAGAGTTGCGTCCGGCTGGGATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp CCTTCTCAAAAGATGAGCCAGCCACGCGGTCCAGGGAGGATGCTGACAGTGGAAGCAACAGAAGCATCTTaGACGGGTGTTGCCGGGGTT +
Preference number: 4 (lower is better)
Translates to: PSQKMSQPRGPGRMLTVEATEAS*TGVAGV
Trigger: AACCCCGGCAACACCCGTCCAAGATGCTTCTGTTGC...TTCCACTGTCAGCATCCTCCCTGGACCGCGTGGCTGGCTCATCTTTTGAGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp TCCAAACACTTCTTGGGAACAAGGTTACATCCAGCCTTGGGGGTCTTCCATCCTTCGTGGGGTGGGAGATaGCAGGCGGGTGGTCCTGAC +
Preference number: 4 (lower is better)
Translates to: SKHFLGTRLHPALGVFHPSWGGR*QAGGPD
Trigger: GTCAGGACCACCCGCCTGCCATCTCCCACCCCACGA...AGGATGGAAGACCCCCAAGGCTGGATGTAACCTTGTTCCCAAGAAGTGTTTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp AATCAGGAAACCTCAGAGAGACGCATGACACCTGGCGGTACAGTCCCAGTGAGTTCCTCGCACCAGCACTaGGAACACCCAGGCTCTGTC +
Preference number: 4 (lower is better)
Translates to: NQETSERRMTPGGTVPVSSSHQH*EHPGSV
Trigger: GACAGAGCCTGGGTGTTCCCAGTGCTGGTGCGAGGA...ACTCACTGGGACTGTACCGCCAGGTGTCATGCGTCTCTCTGAGGTTTCCTGATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp CCTTCTCAAAAGATGAGCCAGCCACGCGGTCCAGGGAGGATGCTGACAGTGGAATCTGGCAAACACAGGTaGTACACTCGTCACCACCCC +
Preference number: 4 (lower is better)
Translates to: PSQKMSQPRGPGRMLTVESGKHR*YTRHHP
Trigger: GGGGTGGTGACGAGTGTACCACCTGTGTTTGCCAGA...TTCCACTGTCAGCATCCTCCCTGGACCGCGTGGCTGGCTCATCTTTTGAGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp AATCCCAGCCGGACGCAACTCTTCCTCCAGGAGAACTTGGCAGTCCCAACCCTTGATGCAGCTCAGACATaGGTCCAGCACAGACGGGAA +
Preference number: 4 (lower is better)
Translates to: NPSRTQLFLQENLAVPTLDAAQT*VQHRRE
Trigger: TTCCCGTCTGTGCTGGACCCATGTCTGAGCTGCATC...AAGGGTTGGGACTGCCAAGTTCTCCTGGAGGAAGAGTTGCGTCCGGCTGGGATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp CTGGCACGTGCACCGGGTGCAGGGTTCATCATCCAAGGTGAACACCTGGCCATTTCCAAGGTGAACACCTaGCCATTCGCCACCTTCCTT +
Preference number: 4 (lower is better)
Translates to: LARAPGAGFIIQGEHLAISKVNT*PFATFL
Trigger: AAGGAAGGTGGCGAATGGCCAGGTGTTCACCTTGGA...AATGGCCAGGTGTTCACCTTGGATGATGAACCCTGCACCCGGTGCACGTGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301770.10
CDS-3UTR CCA 90 bp ACCGAGACAACCTTTAATCAGGAAACCTCAGAGAGACGCATGACACCTGGCGGTCACACCCTGGGCCACTaGCAGAGGTCCTCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: TETTFNQETSERRMTPGGHTLGH*QRSSLQ
Trigger: CTGGAGAGAGGACCTCTGCCAGTGGCCCAGGGTGTG...ACCGCCAGGTGTCATGCGTCTCTCTGAGGTTTCCTGATTAAAGGTTGTCTCGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp AGCCGGACGCAACTCTTCCTCCAGGAGAACTTGGCAGTCCCAACCCTTCTCAAACACCAGGTTCATCCTTaGAGCTGCCCTGCACACACC +
Preference number: 4 (lower is better)
Translates to: SRTQLFLQENLAVPTLLKHQVHP*SCPAHT
Trigger: GGTGTGTGCAGGGCAGCTCCAAGGATGAACCTGGTG...TTTGAGAAGGGTTGGGACTGCCAAGTTCTCCTGGAGGAAGAGTTGCGTCCGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp TCCCAACCCTTCTCAAAAGATGAGCCAGCCACGCGGTCCAGGGAGGATGCTGACTCCTCCAGGAGAACTTaGCAGTCCCAACCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: SQPFSKDEPATRSREDADSSRRT*QSQPFS
Trigger: TGAGAAGGGTTGGGACTGCCAAGTTCTCCTGGAGGA...GTCAGCATCCTCCCTGGACCGCGTGGCTGGCTCATCTTTTGAGAAGGGTTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp GAGTGGAATCCCAGCCGGACGCAACTCTTCCTCCAGGAGAACTTGGCAGTCCCATCCTCCAGGAGAACTTaGCAGTCCCAACCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: EWNPSRTQLFLQENLAVPSSRRT*QSQPFS
Trigger: TGAGAAGGGTTGGGACTGCCAAGTTCTCCTGGAGGA...TGGGACTGCCAAGTTCTCCTGGAGGAAGAGTTGCGTCCGGCTGGGATTCCACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp CAAAAGATGAGCCAGCCACGCGGTCCAGGGAGGATGCTGACAGTGGAAACGACTTACAGTCCCAGTGAGTaGAATCCCAGCCGGACGCAA +
Preference number: 4 (lower is better)
Translates to: QKMSQPRGPGRMLTVETTYSPSE*NPSRTQ
Trigger: TTGCGTCCGGCTGGGATTCCACTCACTGGGACTGTA...AGTCGTTTCCACTGTCAGCATCCTCCCTGGACCGCGTGGCTGGCTCATCTTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp TGTATCTACACAGGAGTGCCGGTTGCCATGAAGGTGGAAGCCAGTTCGACAGGACCAGGGACTGAGGGCTaGCAACACACACTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: CIYTGVPVAMKVEASSTGPGTEG*QHTLLE
Trigger: CTCCAGCAGTGTGTGTTGCCAGCCCTCAGTCCCTGG...TCCTGTCGAACTGGCTTCCACCTTCATGGCAACCGGCACTCCTGTGTAGATACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535599.1
CDS-3UTR CCA 90 bp CAGCCGGACGCAACTCTTCCTCCAGGAGAACTTGGCAGTCCCAACCCTTCTCAAGGAGACAGGGAATCCTaGACAGGAAGAGCAGCAGTC +
Preference number: 4 (lower is better)
Translates to: QPDATLPPGELGSPNPSQGDRES*TGRAAV
Trigger: GACTGCTGCTCTTCCTGTCCAGGATTCCCTGTCTCC...TTGAGAAGGGTTGGGACTGCCAAGTTCTCCTGGAGGAAGAGTTGCGTCCGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613271.4
CDS-3UTR TCA 90 bp ACGCATGACACCTGGCGGTACAGTCCCAGTGAGTGGAATCCCAGCCGGACGCAATTTTTACATCTCTGCTaGCAGGGAGTCCCTAGGCAT +
Preference number: 4 (lower is better)
Translates to: THDTWRYSPSEWNPSRTQFLHLC*QGVPRH
Trigger: ATGCCTAGGGACTCCCTGTCAGCAGAGATGTAAAAA...TTGCGTCCGGCTGGGATTCCACTCACTGGGACTGTACCGCCAGGTGTCATGCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR TCA 90 bp AATCAGGAAACCTCAGAGAGACGCATGACACCTGGCGGTACAGTCCCAGTGAGTGAGTGCCGGTTGCCATaGAGGTGGAAGCCAGTTCGA +
Preference number: 4 (lower is better)
Translates to: NQETSERRMTPGGTVPVSECRLP*RWKPVR
Trigger: TCGAACTGGCTTCCACCTTCATGGCAACCGGCACTC...ACTCACTGGGACTGTACCGCCAGGTGTCATGCGTCTCTCTGAGGTTTCCTGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR TCA 90 bp AGCCGGACGCAACTCTTCCTCCAGGAGAACTTGGCAGTCCCAACCCTTCTCAAACGGACGACACCACTGTaGAAACAGCCTGTGCACGAT +
Preference number: 4 (lower is better)
Translates to: SRTQLFLQENLAVPTLLKRTTPL*KQPVHD
Trigger: ATCGTGCACAGGCTGTTTTCACAGTGGTGTCGTCCG...TTTGAGAAGGGTTGGGACTGCCAAGTTCTCCTGGAGGAAGAGTTGCGTCCGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR TCA 90 bp CAGTCCCAACCCTTCTCAAAAGATGAGCCAGCCACGCGGTCCAGGGAGGATGCTGTTCTCATTGGGAGGTaGAAACACATCCCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: QSQPFSKDEPATRSREDAVLIGR*KHIPFS
Trigger: GCTGAAGGGGATGTGTTTTCACCTCCCAATGAGAAC...AGCATCCTCCCTGGACCGCGTGGCTGGCTCATCTTTTGAGAAGGGTTGGGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR TCA 90 bp AGGTCTCGTTGTTATAGAAGATTCTGCCTGTGTAGGTGCAGCCTGCTGAACAGTCGTCACCACCCCCACTaGACACAGCCCCGTCTGCGT +
Preference number: 4 (lower is better)
Translates to: RSRCYRRFCLCRCSLLNSRHHPH*TQPRLR
Trigger: ACGCAGACGGGGCTGTGTTCAGTGGGGGTGGTGACG...ACTGTTCAGCAGGCTGCACCTACACAGGCAGAATCTTCTATAACAACGAGACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301770.10
CDS-3UTR TCA 90 bp CAGCCGGACGCAACTCTTCCTCCAGGAGAACTTGGCAGTCCCAACCCTTCTCAAGTTCATCATCCAAGGTaGACACCTGGCCATTCGCCA +
Preference number: 4 (lower is better)
Translates to: QPDATLPPGELGSPNPSQVHHPR*TPGHSP
Trigger: TGGCGAATGGCCAGGTGTTCACCTTGGATGATGAAC...TTGAGAAGGGTTGGGACTGCCAAGTTCTCCTGGAGGAAGAGTTGCGTCCGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR TCA 90 bp AATCCCAGCCGGACGCAACTCTTCCTCCAGGAGAACTTGGCAGTCCCAACCCTTTCCGACCAGCTTTGCTaGATGCCACATTTCCGTGAG +
Preference number: 4 (lower is better)
Translates to: NPSRTQLFLQENLAVPTLSDQLC*MPHFRE
Trigger: CTCACGGAAATGTGGCATTCAGCAAAGCTGGTCGGA...AAGGGTTGGGACTGCCAAGTTCTCCTGGAGGAAGAGTTGCGTCCGGCTGGGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301770.10
ENST00000335613.10
CDS-3UTR TCA 90 bp AATCAGGAAACCTCAGAGAGACGCATGACACCTGGCGGTACAGTCCCAGTGAGTGTCTCCCGGACACAGTaGCCTCCTTACATGGTGGAC +
Preference number: 4 (lower is better)
Translates to: NQETSERRMTPGGTVPVSVSRTQ*PPYMVD
Trigger: GTCCACCATGTAAGGAGGTCACTGTGTCCGGGAGAC...ACTCACTGGGACTGTACCGCCAGGTGTCATGCGTCTCTCTGAGGTTTCCTGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR TCA 90 bp ACGCGGTCCAGGGAGGATGCTGACAGTGGAAACGACTTCCTCCATTCTTACAGCGTCCAGGGAGGATGCTaGCAGTGGAAACGACTTCCT +
Preference number: 4 (lower is better)
Translates to: TRSREDADSGNDFLHSYSVQGGC*QWKRLP
Trigger: AGGAAGTCGTTTCCACTGTCAGCATCCTCCCTGGAC...GCTGTAAGAATGGAGGAAGTCGTTTCCACTGTCAGCATCCTCCCTGGACCGCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR GCA 90 bp TCCTCCAGGAGAACTTGGCAGTCCCAACCCTTCTCAAAAGATGAGCCAGCCACGTACAGGAGTGCCGGTTaGCATGAAGGTGGAAGCCAG +
Preference number: 4 (lower is better)
Translates to: SSRRTWQSQPFSKDEPATYRSAG*HEGGSQ
Trigger: CTGGCTTCCACCTTCATGGCAACCGGCACTCCTGTA...CGTGGCTGGCTCATCTTTTGAGAAGGGTTGGGACTGCCAAGTTCTCCTGGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301770.10
CDS-3UTR GCA 90 bp AGCCGGACGCAACTCTTCCTCCAGGAGAACTTGGCAGTCCCAACCCTTCTCAAAATGTGCATAGGAAGCTaGCCACGGTGTTGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: SRTQLFLQENLAVPTLLKMCIGS*PRCCGR
Trigger: CCTGCCACAACACCGTGGGCAGCTTCCTATGCACAT...TTTGAGAAGGGTTGGGACTGCCAAGTTCTCCTGGAGGAAGAGTTGCGTCCGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR GCA 90 bp AGCCGGACGCAACTCTTCCTCCAGGAGAACTTGGCAGTCCCAACCCTTCTCAAATGTGAAAACAGCCTGTaGACGATGGGCAGCACCCAC +
Preference number: 4 (lower is better)
Translates to: SRTQLFLQENLAVPTLLKCENSL*TMGSTH
Trigger: GTGGGTGCTGCCCATCGTGCACAGGCTGTTTTCACA...TTTGAGAAGGGTTGGGACTGCCAAGTTCTCCTGGAGGAAGAGTTGCGTCCGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR GCA 90 bp CAGCCGGACGCAACTCTTCCTCCAGGAGAACTTGGCAGTCCCAACCCTTCTCAAGACAGACACAGACGGTaGAGTTCTCATTGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: QPDATLPPGELGSPNPSQDRHRR*SSHWEV
Trigger: CACCTCCCAATGAGAACTGCACCGTCTGTGTCTGTC...TTGAGAAGGGTTGGGACTGCCAAGTTCTCCTGGAGGAAGAGTTGCGTCCGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR GCA 90 bp CAGCACATTCCAAACACTTCTTGGGAACAAGGTTACATCCAGCCTTGGGGGTCTGAACACAGCCCCGTCTaGGTACCACCGGCCGTGGAA +
Preference number: 4 (lower is better)
Translates to: QHIPNTSWEQGYIQPWGSEHSPV*VPPAVE
Trigger: TTCCACGGCCGGTGGTACGCAGACGGGGCTGTGTTC...AGACCCCCAAGGCTGGATGTAACCTTGTTCCCAAGAAGTGTTTGGAATGTGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR GCA 90 bp AATCAGGAAACCTCAGAGAGACGCATGACACCTGGCGGTACAGTCCCAGTGAGTAGCCCAGCAGGCAGATaGAGCTCAGACATGGGTCCA +
Preference number: 4 (lower is better)
Translates to: NQETSERRMTPGGTVPVSSPAGR*SSDMGP
Trigger: TGGACCCATGTCTGAGCTGCATCTGCCTGCTGGGCT...ACTCACTGGGACTGTACCGCCAGGTGTCATGCGTCTCTCTGAGGTTTCCTGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR GCA 90 bp TCCAAACACTTCTTGGGAACAAGGTTACATCCAGCCTTGGGGGTCTTCCATCCTCTCCCAGCTGGCACGTaGACCGGGTGCAGGGTTCAT +
Preference number: 4 (lower is better)
Translates to: SKHFLGTRLHPALGVFHPLPAGT*TGCRVH
Trigger: ATGAACCCTGCACCCGGTGCACGTGCCAGCTGGGAG...AGGATGGAAGACCCCCAAGGCTGGATGTAACCTTGTTCCCAAGAAGTGTTTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp TTTTACATCTCTGCTGACAGGGAGTCCCTAGGCATTCGTCAGTGTCTTGGCAGCTGGTCCATGGGTTTCTaGGCAGGTGGCCCCTTGCTC +
Preference number: 4 (lower is better)
Translates to: FYISADRESLGIRQCLGSWSMGF*AGGPLL
Trigger: GAGCAAGGGGCCACCTGCCCAGAAACCCATGGACCA...GCTGCCAAGACACTGACGAATGCCTAGGGACTCCCTGTCAGCAGAGATGTAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535599.1
CDS-3UTR CCA 90 bp ACCGAGACAACCTTTAATCAGGAAACCTCAGAGAGACGCATGACACCTGGCGGTTCCCCACATGGTCCATaGGTTTCTGGGCAGGTGGCC +
Preference number: 4 (lower is better)
Translates to: TETTFNQETSERRMTPGGSPHGP*VSGQVA
Trigger: GGCCACCTGCCCAGAAACCCATGGACCATGTGGGGA...ACCGCCAGGTGTCATGCGTCTCTCTGAGGTTTCCTGATTAAAGGTTGTCTCGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp CAGCACATTCCAAACACTTCTTGGGAACAAGGTTACATCCAGCCTTGGGGGTCTGTGTCTTGGCAGCTGTaGCGGTCGGCAGACAGCTGC +
Preference number: 4 (lower is better)
Translates to: QHIPNTSWEQGYIQPWGSVSWQL*RSADSC
Trigger: GCAGCTGTCTGCCGACCGCCACAGCTGCCAAGACAC...AGACCCCCAAGGCTGGATGTAACCTTGTTCCCAAGAAGTGTTTGGAATGTGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp CCTTCTCAAAAGATGAGCCAGCCACGCGGTCCAGGGAGGATGCTGACAGTGGAACTGGAGGGAATTGGGTaGGAACAAGCAGCTTCACAC +
Preference number: 4 (lower is better)
Translates to: PSQKMSQPRGPGRMLTVELEGIG*EQAASH
Trigger: GTGTGAAGCTGCTTGTTCCCACCCAATTCCCTCCAG...TTCCACTGTCAGCATCCTCCCTGGACCGCGTGGCTGGCTCATCTTTTGAGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp TTCTCAAAAGATGAGCCAGCCACGCGGTCCAGGGAGGATGCTGACAGTGGAAACAGCACCCACCATCTCTaGAGGGAATTGGGTGGGAAC +
Preference number: 4 (lower is better)
Translates to: FSKDEPATRSREDADSGNSTHHL*RELGGN
Trigger: GTTCCCACCCAATTCCCTCCAGAGATGGTGGGTGCT...GTTTCCACTGTCAGCATCCTCCCTGGACCGCGTGGCTGGCTCATCTTTTGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp GGGAGGATGCTGACAGTGGAAACGACTTCCTCCATTCTTACAGCACATTCCAAACTCACCTCTCCCAGCTaGCACGTGCACCGGGTGCAG +
Preference number: 4 (lower is better)
Translates to: GRMLTVETTSSILTAHSKLTSPS*HVHRVQ
Trigger: CTGCACCCGGTGCACGTGCCAGCTGGGAGAGGTGAG...TTTGGAATGTGCTGTAAGAATGGAGGAAGTCGTTTCCACTGTCAGCATCCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp AATCAGGAAACCTCAGAGAGACGCATGACACCTGGCGGTACAGTCCCAGTGAGTGGGTCTTCGAGGGGCTaGGGTCCATCATGGAAAGTG +
Preference number: 4 (lower is better)
Translates to: NQETSERRMTPGGTVPVSGSSRG*GPSWKV
Trigger: CACTTTCCATGATGGACCCCAGCCCCTCGAAGACCC...ACTCACTGGGACTGTACCGCCAGGTGTCATGCGTCTCTCTGAGGTTTCCTGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp GGAAACCTCAGAGAGACGCATGACACCTGGCGGTACAGTCCCAGTGAGTGGAATGGTTACATCCAGCCTTaGGGGTCTTCCATCCTCACC +
Preference number: 4 (lower is better)
Translates to: GNLRETHDTWRYSPSEWNGYIQP*GSSILT
Trigger: GGTGAGGATGGAAGACCCCCAAGGCTGGATGTAACC...ATTCCACTCACTGGGACTGTACCGCCAGGTGTCATGCGTCTCTCTGAGGTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp GGGAGGATGCTGACAGTGGAAACGACTTCCTCCATTCTTACAGCACATTCCAAACGCGGCGGACGATTGTaGGGAGGGTCTCTGGCACCT +
Preference number: 4 (lower is better)
Translates to: GRMLTVETTSSILTAHSKRGGRL*GGSLAP
Trigger: AGGTGCCAGAGACCCTCCCCACAATCGTCCGCCGCG...TTTGGAATGTGCTGTAAGAATGGAGGAAGTCGTTTCCACTGTCAGCATCCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335613.10
3UTR CAA 72 bp TGCACGATGGGCAGCACCCACCATCTCTGGAGGGAATaGGGTGGGAACAAGCAGCTTCACACCTCACCTTTT +
Preference number: 4 (lower is better)
Translates to: CTMGSTHHLWRE*GGNKQLHTSPF
Trigger: AAAAGGTGAGGTGTGAAGCTGCTTGTTCCCACCCAATTCCCTCCAGAGATGGTGGGTGCTGCCCATCGTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301770.10
CDS-3UTR TCA 90 bp ACACGTTTCCAGCCAGACAGACACAGACGGTGCAGTTCTCATTGGGAGGTGAAAACCCTTCTCAAAAGATaGGCCAGCCACGCGGTCCAG +
Preference number: 4 (lower is better)
Translates to: TRFQPDRHRRCSSHWEVKTLLKR*ASHAVQ
Trigger: CTGGACCGCGTGGCTGGCTCATCTTTTGAGAAGGGT...TTTCACCTCCCAATGAGAACTGCACCGTCTGTGTCTGTCTGGCTGGAAACGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301770.10
CDS-3UTR TCA 90 bp CAGCCACGCGGTCCAGGGAGGATGCTGACAGTGGAAACGACTTCCTCCATTCTTACCAGCTTTGCTGAATaGCATTTCCGTGAGGGGAGA +
Preference number: 4 (lower is better)
Translates to: QPRGPGRMLTVETTSSILTSFAE*HFREGR
Trigger: TCTCCCCTCACGGAAATGTCATTCAGCAAAGCTGGT...AAGAATGGAGGAAGTCGTTTCCACTGTCAGCATCCTCCCTGGACCGCGTGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613271.4
CDS-3UTR GCA 90 bp AATCAGGAAACCTCAGAGAGACGCATGACACCTGGCGGTACAGTCCCAGTGAGTTGTGAAAACAGCCTGTaGACGATGGGCAGCACCCAC +
Preference number: 4 (lower is better)
Translates to: NQETSERRMTPGGTVPVSCENSL*TMGSTH
Trigger: GTGGGTGCTGCCCATCGTGCACAGGCTGTTTTCACA...ACTCACTGGGACTGTACCGCCAGGTGTCATGCGTCTCTCTGAGGTTTCCTGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR GCA 90 bp GGAAACCTCAGAGAGACGCATGACACCTGGCGGTACAGTCCCAGTGAGTGGAATGACAGACACAGACGGTaGAGTTCTCATTGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: GNLRETHDTWRYSPSEWNDRHRR*SSHWEV
Trigger: CACCTCCCAATGAGAACTGCACCGTCTGTGTCTGTC...ATTCCACTCACTGGGACTGTACCGCCAGGTGTCATGCGTCTCTCTGAGGTTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR GCA 90 bp ACATTCCAAACACTTCTTGGGAACAAGGTTACATCCAGCCTTGGGGGTCTTCCAGAACACAGCCCCGTCTaGGTACCACCGGCCGTGGAA +
Preference number: 4 (lower is better)
Translates to: TFQTLLGNKVTSSLGGLPEHSPV*VPPAVE
Trigger: TTCCACGGCCGGTGGTACGCAGACGGGGCTGTGTTC...TGGAAGACCCCCAAGGCTGGATGTAACCTTGTTCCCAAGAAGTGTTTGGAATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR GCA 90 bp CTTCCTCCATTCTTACAGCACATTCCAAACACTTCTTGGGAACAAGGTTACATCGGTGACACCGGCCCCTaGCTCCCCGCCCTGGCAGAT +
Preference number: 4 (lower is better)
Translates to: LPPFLQHIPNTSWEQGYIGDTGP*LPALAD
Trigger: ATCTGCCAGGGCGGGGAGGCAGGGGCCGGTGTCACC...GATGTAACCTTGTTCCCAAGAAGTGTTTGGAATGTGCTGTAAGAATGGAGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301770.10
CDS-3UTR GCA 90 bp AACTCTTCCTCCAGGAGAACTTGGCAGTCCCAACCCTTCTCAAAAGATGAGCCAAGGGTGGGTGGTGGCTaGAAGGGCTGTGGAGAGTCT +
Preference number: 4 (lower is better)
Translates to: NSSSRRTWQSQPFSKDEPRVGGG*KGCGES
Trigger: AGACTCTCCACAGCCCTTGCAGCCACCACCCACCCT...TGGCTCATCTTTTGAGAAGGGTTGGGACTGCCAAGTTCTCCTGGAGGAAGAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR GCA 90 bp TCCAAACACTTCTTGGGAACAAGGTTACATCCAGCCTTGGGGGTCTTCCATCCTGTTCATCCTTGGAGCTaGCCTGCACACACCCTGGGC +
Preference number: 4 (lower is better)
Translates to: SKHFLGTRLHPALGVFHPVHPWS*PAHTLG
Trigger: GCCCAGGGTGTGTGCAGGGCAGCTCCAAGGATGAAC...AGGATGGAAGACCCCCAAGGCTGGATGTAACCTTGTTCCCAAGAAGTGTTTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR GCA 90 bp TCCTCCAGGAGAACTTGGCAGTCCCAACCCTTCTCAAAAGATGAGCCAGCCACGCATCTGCCTGGCAGATaGATAACTCACAGGGGTCAC +
Preference number: 4 (lower is better)
Translates to: SSRRTWQSQPFSKDEPATHLPGR*ITHRGH
Trigger: GTGACCCCTGTGAGTTATGCATCTGCCAGGCAGATG...CGTGGCTGGCTCATCTTTTGAGAAGGGTTGGGACTGCCAAGTTCTCCTGGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp ACCGAGACAACCTTTAATCAGGAAACCTCAGAGAGACGCATGACACCTGGCGGTGCCGTACTCCCCACATaGTCCATGGGTTTCTGGGCA +
Preference number: 4 (lower is better)
Translates to: TETTFNQETSERRMTPGGAVLPT*SMGFWA
Trigger: TGCCCAGAAACCCATGGACCATGTGGGGAGTACGGC...ACCGCCAGGTGTCATGCGTCTCTCTGAGGTTTCCTGATTAAAGGTTGTCTCGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp ACATTCCAAACACTTCTTGGGAACAAGGTTACATCCAGCCTTGGGGGTCTTCCAGTGTCTTGGCAGCTGTaGCGGTCGGCAGACAGCTGC +
Preference number: 4 (lower is better)
Translates to: TFQTLLGNKVTSSLGGLPVSWQL*RSADSC
Trigger: GCAGCTGTCTGCCGACCGCCACAGCTGCCAAGACAC...TGGAAGACCCCCAAGGCTGGATGTAACCTTGTTCCCAAGAAGTGTTTGGAATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp AATCAGGAAACCTCAGAGAGACGCATGACACCTGGCGGTACAGTCCCAGTGAGTGACTCGCCTCTCCAATaGCCTCCGACACTCGTTTAC +
Preference number: 4 (lower is better)
Translates to: NQETSERRMTPGGTVPVSDSPLQ*PPTLVY
Trigger: GTAAACGAGTGTCGGAGGCCATTGGAGAGGCGAGTC...ACTCACTGGGACTGTACCGCCAGGTGTCATGCGTCTCTCTGAGGTTTCCTGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp GAAACGACTTCCTCCATTCTTACAGCACATTCCAAACACTTCTTGGGAACAAGGGCCGGGGTTGCAGGATaGCAGATGGGGCCAGCACGG +
Preference number: 4 (lower is better)
Translates to: ETTSSILTAHSKHFLGTRAGVAG*QMGPAR
Trigger: CCGTGCTGGCCCCATCTGCCATCCTGCAACCCCGGC...CCTTGTTCCCAAGAAGTGTTTGGAATGTGCTGTAAGAATGGAGGAAGTCGTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp AATCCCAGCCGGACGCAACTCTTCCTCCAGGAGAACTTGGCAGTCCCAACCCTTCGGTGCAGTTCTCATTaGGAGGTGAAAACACATCCC +
Preference number: 4 (lower is better)
Translates to: NPSRTQLFLQENLAVPTLRCSSH*EVKTHP
Trigger: GGGATGTGTTTTCACCTCCCAATGAGAACTGCACCG...AAGGGTTGGGACTGCCAAGTTCTCCTGGAGGAAGAGTTGCGTCCGGCTGGGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp GAAACGACTTCCTCCATTCTTACAGCACATTCCAAACACTTCTTGGGAACAAGGGGCCCCAGGCTCCCCTaGGAAAGTGGCTGTCAGCCC +
Preference number: 4 (lower is better)
Translates to: ETTSSILTAHSKHFLGTRGPRLP*ESGCQP
Trigger: GGGCTGACAGCCACTTTCCCAGGGGAGCCTGGGGCC...CCTTGTTCCCAAGAAGTGTTTGGAATGTGCTGTAAGAATGGAGGAAGTCGTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp GGGAGGATGCTGACAGTGGAAACGACTTCCTCCATTCTTACAGCACATTCCAAACACACCCTGGGCCACTaGCAGAGGTCCTCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: GRMLTVETTSSILTAHSKHTLGH*QRSSLQ
Trigger: CTGGAGAGAGGACCTCTGCCAGTGGCCCAGGGTGTG...TTTGGAATGTGCTGTAAGAATGGAGGAAGTCGTTTCCACTGTCAGCATCCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp AGACGGGAAGGTCTCGTTGTTATAGAAGATTCTGCCTGTGTAGGTGCAGCCTGCGAGACGCATGACACCTaGCGGTACAGTCCCAGTGAG +
Preference number: 4 (lower is better)
Translates to: RREGLVVIEDSACVGAACETHDT*RYSPSE
Trigger: CTCACTGGGACTGTACCGCCAGGTGTCATGCGTCTC...GCAGGCTGCACCTACACAGGCAGAATCTTCTATAACAACGAGACCTTCCCGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301770.10
CDS-3UTR CCA 90 bp ATCTACACAGGAGTGCCGGTTGCCATGAAGGTGGAAGCCAGTTCGACAGGAACACTGGAGGAGAAGACTTaGGGCACAGGGACAAGCACT +
Preference number: 4 (lower is better)
Translates to: IYTGVPVAMKVEASSTGTLEEKT*GTGTST
Trigger: AGTGCTTGTCCCTGTGCCCCAAGTCTTCTCCTCCAG...TGTTCCTGTCGAACTGGCTTCCACCTTCATGGCAACCGGCACTCCTGTGTAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535599.1
3UTR CAA 72 bp TTTCCAGCCAGACAGACACAGACGGTGCAGTTCTCATaGGGAGGTGAAAACACATCCCCTTCAGCTCGGACG +
Preference number: 4 (lower is better)
Translates to: FPARQTQTVQFS*GGENTSPSART
Trigger: CGTCCGAGCTGAAGGGGATGTGTTTTCACCTCCCAATGAGAACTGCACCGTCTGTGTCTGTCTGGCTGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301770.10
CDS-3UTR TCA 90 bp GAAACGACTTCCTCCATTCTTACAGCACATTCCAAACACTTCTTGGGAACAAGGGGGATCCGGATCGGGTaGGGGCAGGAGTCCACACAG +
Preference number: 4 (lower is better)
Translates to: ETTSSILTAHSKHFLGTRGIRIG*GQESTQ
Trigger: CTGTGTGGACTCCTGCCCTCACCCGATCCGGATCCC...CCTTGTTCCCAAGAAGTGTTTGGAATGTGCTGTAAGAATGGAGGAAGTCGTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR TCA 90 bp AGTGGAAACGACTTCCTCCATTCTTACAGCACATTCCAAACACTTCTTGGGAACGGGGGAACAGGCCACTaGGCCCAGCAGGCAGATGCA +
Preference number: 4 (lower is better)
Translates to: SGNDFLHSYSTFQTLLGNGGTGH*AQQADA
Trigger: TGCATCTGCCTGCTGGGCTCAGTGGCCTGTTCCCCC...GTTCCCAAGAAGTGTTTGGAATGTGCTGTAAGAATGGAGGAAGTCGTTTCCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR TCA 90 bp ATGCTGACAGTGGAAACGACTTCCTCCATTCTTACAGCACATTCCAAACACTTCCTGGGCCCCAGAGGCTaGGAACGAGCGCTCTGGAGT +
Preference number: 4 (lower is better)
Translates to: MLTVETTSSILTAHSKHFLGPRG*ERALWS
Trigger: ACTCCAGAGCGCTCGTTCTCAGCCTCTGGGGCCCAG...GAAGTGTTTGGAATGTGCTGTAAGAATGGAGGAAGTCGTTTCCACTGTCAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR TCA 90 bp GACTTCCTCCATTCTTACAGCACATTCCAAACACTTCTTGGGAACAAGGTTACAGAGGCCCGAGGAGGGTaGTGGGGTCTTCGAGGGGCT +
Preference number: 4 (lower is better)
Translates to: DFLHSYSTFQTLLGNKVTEARGG*WGLRGA
Trigger: AGCCCCTCGAAGACCCCATCACCCTCCTCGGGCCTC...TGTAACCTTGTTCCCAAGAAGTGTTTGGAATGTGCTGTAAGAATGGAGGAAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613271.4
CDS-3UTR GCA 90 bp ATGCTGACAGTGGAAACGACTTCCTCCATTCTTACAGCACATTCCAAACACTTCAGGGGCAGGGTGCAGTaGCCACCACCCATAGAGGGC +
Preference number: 4 (lower is better)
Translates to: MLTVETTSSILTAHSKHFRGRVQ*PPPIEG
Trigger: GCCCTCTATGGGTGGTGGGCACTGCACCCTGCCCCT...GAAGTGTTTGGAATGTGCTGTAAGAATGGAGGAAGTCGTTTCCACTGTCAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301770.10
ENST00000335613.10
CDS-3UTR GCA 90 bp GCAACTCTTCCTCCAGGAGAACTTGGCAGTCCCAACCCTTCTCAAAAGATGAGCTGTGAAAACAGCCTGTaGACGATGGGCAGCACCCAC +
Preference number: 4 (lower is better)
Translates to: ATLPPGELGSPNPSQKMSCENSL*TMGSTH
Trigger: GTGGGTGCTGCCCATCGTGCACAGGCTGTTTTCACA...GCTCATCTTTTGAGAAGGGTTGGGACTGCCAAGTTCTCCTGGAGGAAGAGTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR GCA 90 bp CAGCACATTCCAAACACTTCTTGGGAACAAGGTTACATCCAGCCTTGGGGGTCTAGCCCAGCAGGCAGATaGAGCTCAGACATGGGTCCA +
Preference number: 4 (lower is better)
Translates to: QHIPNTSWEQGYIQPWGSSPAGR*SSDMGP
Trigger: TGGACCCATGTCTGAGCTGCATCTGCCTGCTGGGCT...AGACCCCCAAGGCTGGATGTAACCTTGTTCCCAAGAAGTGTTTGGAATGTGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp CAGCACATTCCAAACACTTCTTGGGAACAAGGTTACATCCAGCCTTGGGGGTCTGGCAGGAGCAGACATTaGGAGCGATGCAGATGCCAC +
Preference number: 4 (lower is better)
Translates to: QHIPNTSWEQGYIQPWGSGRSRH*ERCRCH
Trigger: GTGGCATCTGCATCGCTCCCAATGTCTGCTCCTGCC...AGACCCCCAAGGCTGGATGTAACCTTGTTCCCAAGAAGTGTTTGGAATGTGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp GCAACTCTTCCTCCAGGAGAACTTGGCAGTCCCAACCCTTCTCAAAAGATGAGCGCAACAGAAGCATCTTaGACGGGTGTTGCCGGGGTT +
Preference number: 4 (lower is better)
Translates to: ATLPPGELGSPNPSQKMSATEAS*TGVAGV
Trigger: AACCCCGGCAACACCCGTCCAAGATGCTTCTGTTGC...GCTCATCTTTTGAGAAGGGTTGGGACTGCCAAGTTCTCCTGGAGGAAGAGTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp ACACGTTTCCAGCCAGACAGACACAGACGGTGCAGTTCTCATTGGGAGGTGAAATCCTTGATTCATGCATaGCTCCCAGGTGCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: TRFQPDRHRRCSSHWEVKSLIHA*LPGASR
Trigger: CCTGCTGGCACCTGGGAGCCATGCATGAATCAAGGA...TTTCACCTCCCAATGAGAACTGCACCGTCTGTGTCTGTCTGGCTGGAAACGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301770.10
CDS-3UTR CCA 90 bp AATCAGGAAACCTCAGAGAGACGCATGACACCTGGCGGTACAGTCCCAGTGAGTTCCACCTCCCCATTCTaGCAAACACAGGTGGTACAC +
Preference number: 4 (lower is better)
Translates to: NQETSERRMTPGGTVPVSSTSPF*QTQVVH
Trigger: GTGTACCACCTGTGTTTGCCAGAATGGGGAGGTGGA...ACTCACTGGGACTGTACCGCCAGGTGTCATGCGTCTCTCTGAGGTTTCCTGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp GATGCTGACAGTGGAAACGACTTCCTCCATTCTTACAGCACATTCCAAACACTTCTCACCTCTCCCAGCTaGCACGTGCACCGGGTGCAG +
Preference number: 4 (lower is better)
Translates to: DADSGNDFLHSYSTFQTLLTSPS*HVHRVQ
Trigger: CTGCACCCGGTGCACGTGCCAGCTGGGAGAGGTGAG...AAGTGTTTGGAATGTGCTGTAAGAATGGAGGAAGTCGTTTCCACTGTCAGCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp GATGCTGACAGTGGAAACGACTTCCTCCATTCTTACAGCACATTCCAAACACTTGGCCAGGGTGGGTGGTaGCTGCAAGGGCTGTGGAGA +
Preference number: 4 (lower is better)
Translates to: DADSGNDFLHSYSTFQTLGQGGW*LQGLWR
Trigger: TCTCCACAGCCCTTGCAGCCACCACCCACCCTGGCC...AAGTGTTTGGAATGTGCTGTAAGAATGGAGGAAGTCGTTTCCACTGTCAGCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp ACCGAGACAACCTTTAATCAGGAAACCTCAGAGAGACGCATGACACCTGGCGGTGGTTACATCCAGCCTTaGGGGTCTTCCATCCTCACC +
Preference number: 4 (lower is better)
Translates to: TETTFNQETSERRMTPGGGYIQP*GSSILT
Trigger: GGTGAGGATGGAAGACCCCCAAGGCTGGATGTAACC...ACCGCCAGGTGTCATGCGTCTCTCTGAGGTTTCCTGATTAAAGGTTGTCTCGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR TCA 90 bp GACTTCCTCCATTCTTACAGCACATTCCAAACACTTCTTGGGAACAAGGTTACAGGTCAGCTCGGAGCCTaGAGCCAGGTCGGCATGTGC +
Preference number: 4 (lower is better)
Translates to: DFLHSYSTFQTLLGNKVTGQLGA*SQVGMC
Trigger: GCACATGCCGACCTGGCTTCAGGCTCCGAGCTGACC...TGTAACCTTGTTCCCAAGAAGTGTTTGGAATGTGCTGTAAGAATGGAGGAAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR TCA 90 bp GATGCTGACAGTGGAAACGACTTCCTCCATTCTTACAGCACATTCCAAACACTTAAGGGTAGGTACAGGTaGTGGGGCAGTCCACGGGGG +
Preference number: 4 (lower is better)
Translates to: DADSGNDFLHSYSTFQTLKGRYR*WGSPRG
Trigger: CCCCCGTGGACTGCCCCATCACCTGTACCTACCCTT...AAGTGTTTGGAATGTGCTGTAAGAATGGAGGAAGTCGTTTCCACTGTCAGCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR TCA 90 bp AGTGGAAACGACTTCCTCCATTCTTACAGCACATTCCAAACACTTCTTGGGAACAAGGGTAGGTACAGGTaGTGGGGCAGTCCACGGGGG +
Preference number: 4 (lower is better)
Translates to: SGNDFLHSYSTFQTLLGNKGRYR*WGSPRG
Trigger: CCCCCGTGGACTGCCCCATCACCTGTACCTACCCTT...GTTCCCAAGAAGTGTTTGGAATGTGCTGTAAGAATGGAGGAAGTCGTTTCCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR TCA 90 bp CAGTGGAAACGACTTCCTCCATTCTTACAGCACATTCCAAACACTTCTTGGGAAGCGGTACAGTCCCAGTaGGTGGAATCCCAGCCGGAC +
Preference number: 4 (lower is better)
Translates to: QWKRLPPFLQHIPNTSWEAVQSQ*VESQPD
Trigger: GTCCGGCTGGGATTCCACTCACTGGGACTGTACCGC...TTCCCAAGAAGTGTTTGGAATGTGCTGTAAGAATGGAGGAAGTCGTTTCCACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR GCA 90 bp ACGCATGACACCTGGCGGTACAGTCCCAGTGAGTGGAATCCCAGCCGGACGCAAACTTGTAGCTGCCAATaGTGTTTTTACATCTCTGCT +
Preference number: 4 (lower is better)
Translates to: THDTWRYSPSEWNPSRTQTCSCQ*CFYISA
Trigger: AGCAGAGATGTAAAAACAGCATTGGCAGCTACAAGT...TTGCGTCCGGCTGGGATTCCACTCACTGGGACTGTACCGCCAGGTGTCATGCGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp CTTCCTCCATTCTTACAGCACATTCCAAACACTTCTTGGGAACAAGGTTACATCTCGTGGGGTGGGAGATaGCAGGCGGGTGGTCCTGAC +
Preference number: 4 (lower is better)
Translates to: LPPFLQHIPNTSWEQGYISWGGR*QAGGPD
Trigger: GTCAGGACCACCCGCCTGCCATCTCCCACCCCACGA...GATGTAACCTTGTTCCCAAGAAGTGTTTGGAATGTGCTGTAAGAATGGAGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp GACTTCCTCCATTCTTACAGCACATTCCAAACACTTCTTGGGAACAAGGTTACATGGGTAGTCGTGGGGTaGGAGATGGCAGGCGGGTGG +
Preference number: 4 (lower is better)
Translates to: DFLHSYSTFQTLLGNKVTWVVVG*EMAGGW
Trigger: CCACCCGCCTGCCATCTCCCACCCCACGACTACCCA...TGTAACCTTGTTCCCAAGAAGTGTTTGGAATGTGCTGTAAGAATGGAGGAAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp GGAATCCCAGCCGGACGCAACTCTTCCTCCAGGAGAACTTGGCAGTCCCAACCCGAAATAGCATCTCACTaGAACACAAGTACAGCAATC +
Preference number: 4 (lower is better)
Translates to: GIPAGRNSSSRRTWQSQPEIASH*NTSTAI
Trigger: GATTGCTGTACTTGTGTTCCAGTGAGATGCTATTTC...GGGTTGGGACTGCCAAGTTCTCCTGGAGGAAGAGTTGCGTCCGGCTGGGATTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp ATGCTGACAGTGGAAACGACTTCCTCCATTCTTACAGCACATTCCAAACACTTCTCGGCACAGGCCCGCTaGCAGGGAACCTTCTCACAG +
Preference number: 4 (lower is better)
Translates to: MLTVETTSSILTAHSKHFSAQAR*QGTFSQ
Trigger: CTGTGAGAAGGTTCCCTGCCAGCGGGCCTGTGCCGA...GAAGTGTTTGGAATGTGCTGTAAGAATGGAGGAAGTCGTTTCCACTGTCAGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp GACTTCCTCCATTCTTACAGCACATTCCAAACACTTCTTGGGAACAAGGTTACAGGCCAGGGTGGGTGGTaGCTGCAAGGGCTGTGGAGA +
Preference number: 4 (lower is better)
Translates to: DFLHSYSTFQTLLGNKVTGQGGW*LQGLWR
Trigger: TCTCCACAGCCCTTGCAGCCACCACCCACCCTGGCC...TGTAACCTTGTTCCCAAGAAGTGTTTGGAATGTGCTGTAAGAATGGAGGAAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp GGAATCCCAGCCGGACGCAACTCTTCCTCCAGGAGAACTTGGCAGTCCCAACCCATTCCAAACACTTCTTaGGAACAAGGTTACATCCAG +
Preference number: 4 (lower is better)
Translates to: GIPAGRNSSSRRTWQSQPIPNTS*EQGYIQ
Trigger: CTGGATGTAACCTTGTTCCCAAGAAGTGTTTGGAAT...GGGTTGGGACTGCCAAGTTCTCCTGGAGGAAGAGTTGCGTCCGGCTGGGATTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp TGGCCCTCGCAGGAGGAGGTTACACATTCGTCAATGTCTGTACACCTGATGCCAGCAGAGAGGAATCCTTaGGGTGTATCTACACAGGAG +
Preference number: 4 (lower is better)
Translates to: WPSQEEVTHSSMSVHLMPAERNP*GVSTQE
Trigger: CTCCTGTGTAGATACACCCCAAGGATTCCTCTCTGC...TGGCATCAGGTGTACAGACATTGACGAATGTGTAACCTCCTCCTGCGAGGGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535599.1
CDS-3UTR TCA 90 bp GACTTCCTCCATTCTTACAGCACATTCCAAACACTTCTTGGGAACAAGGTTACAACTCGGGCCACCTCCTaGCAGCCTCCATGGTTGCAG +
Preference number: 4 (lower is better)
Translates to: DFLHSYSTFQTLLGNKVTTRATS*QPPWLQ
Trigger: CTGCAACCATGGAGGCTGTCAGGAGGTGGCCCGAGT...TGTAACCTTGTTCCCAAGAAGTGTTTGGAATGTGCTGTAAGAATGGAGGAAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR TCA 90 bp GCAACTCTTCCTCCAGGAGAACTTGGCAGTCCCAACCCTTCTCAAAAGATGAGCGTTCTCATTGGGAGGTaGAAACACATCCCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: ATLPPGELGSPNPSQKMSVLIGR*KHIPFS
Trigger: GCTGAAGGGGATGTGTTTTCACCTCCCAATGAGAAC...GCTCATCTTTTGAGAAGGGTTGGGACTGCCAAGTTCTCCTGGAGGAAGAGTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR TCA 90 bp GCTGACAGTGGAAACGACTTCCTCCATTCTTACAGCACATTCCAAACACTTCTTGTAGGTGCAGCCTGCTaGACAGTCTGGGCAGCACTG +
Preference number: 4 (lower is better)
Translates to: ADSGNDFLHSYSTFQTLLVGAAC*TVWAAL
Trigger: CAGTGCTGCCCAGACTGTTCAGCAGGCTGCACCTAC...AAGAAGTGTTTGGAATGTGCTGTAAGAATGGAGGAAGTCGTTTCCACTGTCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR GCA 90 bp GGGAGGATGCTGACAGTGGAAACGACTTCCTCCATTCTTACAGCACATTCCAAACGACTCCTTGATTCATaGATGGCTCCCAGGTGCCAG +
Preference number: 4 (lower is better)
Translates to: GRMLTVETTSSILTAHSKRLLDS*MAPRCQ
Trigger: CTGGCACCTGGGAGCCATGCATGAATCAAGGAGTCG...TTTGGAATGTGCTGTAAGAATGGAGGAAGTCGTTTCCACTGTCAGCATCCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR GCA 90 bp CAGCACATTCCAAACACTTCTTGGGAACAAGGTTACATCCAGCCTTGGGGGTCTGACACTCAGGAGAGATaGAGGACACGTTTCCAGCCA +
Preference number: 4 (lower is better)
Translates to: QHIPNTSWEQGYIQPWGSDTQER*RTRFQP
Trigger: TGGCTGGAAACGTGTCCTGCATCTCTCCTGAGTGTC...AGACCCCCAAGGCTGGATGTAACCTTGTTCCCAAGAAGTGTTTGGAATGTGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR GCA 90 bp TTCTCAAAAGATGAGCCAGCCACGCGGTCCAGGGAGGATGCTGACAGTGGAAACTGTTATAGAAGATTCTaGCTGTGTAGGTGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: FSKDEPATRSREDADSGNCYRRF*LCRCSL
Trigger: CAGGCTGCACCTACACAGGCAGAATCTTCTATAACA...GTTTCCACTGTCAGCATCCTCCCTGGACCGCGTGGCTGGCTCATCTTTTGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR GCA 90 bp AGTGGAAACGACTTCCTCCATTCTTACAGCACATTCCAAACACTTCTTGGGAACGTTCATCCTTGGAGCTaGCCTGCACACACCCTGGGC +
Preference number: 4 (lower is better)
Translates to: SGNDFLHSYSTFQTLLGNVHPWS*PAHTLG
Trigger: GCCCAGGGTGTGTGCAGGGCAGCTCCAAGGATGAAC...GTTCCCAAGAAGTGTTTGGAATGTGCTGTAAGAATGGAGGAAGTCGTTTCCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR GCA 90 bp CATGAAGGTGGAAGCCAGTTCGACAGGAACACTTGTAGCTGCCAATGCTGTTTTGCTGGCAACACACACTaGTGGAGGAGAAGACTTGGG +
Preference number: 4 (lower is better)
Translates to: HEGGSQFDRNTCSCQCCFAGNTH*WRRRLG
Trigger: CCCAAGTCTTCTCCTCCAGCAGTGTGTGTTGCCAGC...AAAACAGCATTGGCAGCTACAAGTGTTCCTGTCGAACTGGCTTCCACCTTCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535599.1
CDS-3UTR CCA 90 bp AGTGGAAACGACTTCCTCCATTCTTACAGCACATTCCAAACACTTCTTGGGAACTGGTCCATGGGTTTCTaGGCAGGTGGCCCCTTGCTC +
Preference number: 4 (lower is better)
Translates to: SGNDFLHSYSTFQTLLGNWSMGF*AGGPLL
Trigger: GAGCAAGGGGCCACCTGCCCAGAAACCCATGGACCA...GTTCCCAAGAAGTGTTTGGAATGTGCTGTAAGAATGGAGGAAGTCGTTTCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp GACTTCCTCCATTCTTACAGCACATTCCAAACACTTCTTGGGAACAAGGTTACAGTGTCTTGGCAGCTGTaGCGGTCGGCAGACAGCTGC +
Preference number: 4 (lower is better)
Translates to: DFLHSYSTFQTLLGNKVTVSWQL*RSADSC
Trigger: GCAGCTGTCTGCCGACCGCCACAGCTGCCAAGACAC...TGTAACCTTGTTCCCAAGAAGTGTTTGGAATGTGCTGTAAGAATGGAGGAAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp GGGAGGATGCTGACAGTGGAAACGACTTCCTCCATTCTTACAGCACATTCCAAATCTGGCAAACACAGGTaGTACACTCGTCACCACCCC +
Preference number: 4 (lower is better)
Translates to: GRMLTVETTSSILTAHSKSGKHR*YTRHHP
Trigger: GGGGTGGTGACGAGTGTACCACCTGTGTTTGCCAGA...TTTGGAATGTGCTGTAAGAATGGAGGAAGTCGTTTCCACTGTCAGCATCCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR TCA 90 bp AGGTCTCGTTGTTATAGAAGATTCTGCCTGTGTAGGTGCAGCCTGCTGAACAGTTTGTGGCAGGAATGGTaGCAGACTCGCCTCTCCAAT +
Preference number: 4 (lower is better)
Translates to: RSRCYRRFCLCRCSLLNSLWQEW*QTRLSN
Trigger: ATTGGAGAGGCGAGTCTGTCACCATTCCTGCCACAA...ACTGTTCAGCAGGCTGCACCTACACAGGCAGAATCTTCTATAACAACGAGACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301770.10
CDS-3UTR TCA 90 bp CAGTGGAAACGACTTCCTCCATTCTTACAGCACATTCCAAACACTTCTTGGGAAAGTGAGTGTGGACCATaGGCTCCTGCCGGGCTTGTA +
Preference number: 4 (lower is better)
Translates to: QWKRLPPFLQHIPNTSWESECGP*APAGLV
Trigger: TACAAGCCCGGCAGGAGCTCATGGTCCACACTCACT...TTCCCAAGAAGTGTTTGGAATGTGCTGTAAGAATGGAGGAAGTCGTTTCCACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR TCA 90 bp GAAACGACTTCCTCCATTCTTACAGCACATTCCAAACACTTCTTGGGAACAAGGACCCTTCTCAAAAGATaGGCCAGCCACGCGGTCCAG +
Preference number: 4 (lower is better)
Translates to: ETTSSILTAHSKHFLGTRTLLKR*ASHAVQ
Trigger: CTGGACCGCGTGGCTGGCTCATCTTTTGAGAAGGGT...CCTTGTTCCCAAGAAGTGTTTGGAATGTGCTGTAAGAATGGAGGAAGTCGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR GCA 90 bp GCTGACAGTGGAAACGACTTCCTCCATTCTTACAGCACATTCCAAACACTTCTTATCTTGGACGGGTGTTaGCGGGGTTGCAGGATGGCA +
Preference number: 4 (lower is better)
Translates to: ADSGNDFLHSYSTFQTLLILDGC*RGCRMA
Trigger: TGCCATCCTGCAACCCCGGCAACACCCGTCCAAGAT...AAGAAGTGTTTGGAATGTGCTGTAAGAATGGAGGAAGTCGTTTCCACTGTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR GCA 90 bp ACATTCCAAACACTTCTTGGGAACAAGGTTACATCCAGCCTTGGGGGTCTTCCAGACACTCAGGAGAGATaGAGGACACGTTTCCAGCCA +
Preference number: 4 (lower is better)
Translates to: TFQTLLGNKVTSSLGGLPDTQER*RTRFQP
Trigger: TGGCTGGAAACGTGTCCTGCATCTCTCCTGAGTGTC...TGGAAGACCCCCAAGGCTGGATGTAACCTTGTTCCCAAGAAGTGTTTGGAATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR GCA 90 bp CAGTGGAAACGACTTCCTCCATTCTTACAGCACATTCCAAACACTTCTTGGGAACACAGGAGTGCCGGTTaGCATGAAGGTGGAAGCCAG +
Preference number: 4 (lower is better)
Translates to: QWKRLPPFLQHIPNTSWEHRSAG*HEGGSQ
Trigger: CTGGCTTCCACCTTCATGGCAACCGGCACTCCTGTG...TTCCCAAGAAGTGTTTGGAATGTGCTGTAAGAATGGAGGAAGTCGTTTCCACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335613.10
ENST00000613271.4
CDS-3UTR GCA 90 bp ATGCTGACAGTGGAAACGACTTCCTCCATTCTTACAGCACATTCCAAACACTTCCACAGGAGTGCCGGTTaGCATGAAGGTGGAAGCCAG +
Preference number: 4 (lower is better)
Translates to: MLTVETTSSILTAHSKHFHRSAG*HEGGSQ
Trigger: CTGGCTTCCACCTTCATGGCAACCGGCACTCCTGTG...GAAGTGTTTGGAATGTGCTGTAAGAATGGAGGAAGTCGTTTCCACTGTCAGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp ATGCTGACAGTGGAAACGACTTCCTCCATTCTTACAGCACATTCCAAACACTTCGCCGTACTCCCCACATaGTCCATGGGTTTCTGGGCA +
Preference number: 4 (lower is better)
Translates to: MLTVETTSSILTAHSKHFAVLPT*SMGFWA
Trigger: TGCCCAGAAACCCATGGACCATGTGGGGAGTACGGC...GAAGTGTTTGGAATGTGCTGTAAGAATGGAGGAAGTCGTTTCCACTGTCAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp AGTGGAAACGACTTCCTCCATTCTTACAGCACATTCCAAACACTTCTTGGGAACGCCGTACTCCCCACATaGTCCATGGGTTTCTGGGCA +
Preference number: 4 (lower is better)
Translates to: SGNDFLHSYSTFQTLLGNAVLPT*SMGFWA
Trigger: TGCCCAGAAACCCATGGACCATGTGGGGAGTACGGC...GTTCCCAAGAAGTGTTTGGAATGTGCTGTAAGAATGGAGGAAGTCGTTTCCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp GAAACGACTTCCTCCATTCTTACAGCACATTCCAAACACTTCTTGGGAACAAGGCATTCGTCAGTGTCTTaGCAGCTGTGGCGGTCGGCA +
Preference number: 4 (lower is better)
Translates to: ETTSSILTAHSKHFLGTRHSSVS*QLWRSA
Trigger: TGCCGACCGCCACAGCTGCCAAGACACTGACGAATG...CCTTGTTCCCAAGAAGTGTTTGGAATGTGCTGTAAGAATGGAGGAAGTCGTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp ACATTCCAAACACTTCTTGGGAACAAGGTTACATCCAGCCTTGGGGGTCTTCCATCCACCTCCCCATTCTaGCAAACACAGGTGGTACAC +
Preference number: 4 (lower is better)
Translates to: TFQTLLGNKVTSSLGGLPSTSPF*QTQVVH
Trigger: GTGTACCACCTGTGTTTGCCAGAATGGGGAGGTGGA...TGGAAGACCCCCAAGGCTGGATGTAACCTTGTTCCCAAGAAGTGTTTGGAATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp CTTCCTCCATTCTTACAGCACATTCCAAACACTTCTTGGGAACAAGGTTACATCGAGGGTGTGGGCTCCTaGCAGGTGAAGCAACACTGC +
Preference number: 4 (lower is better)
Translates to: LPPFLQHIPNTSWEQGYIEGVGS*QVKQHC
Trigger: GCAGTGTTGCTTCACCTGCCAGGAGCCCACACCCTC...GATGTAACCTTGTTCCCAAGAAGTGTTTGGAATGTGCTGTAAGAATGGAGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp ATGCTGACAGTGGAAACGACTTCCTCCATTCTTACAGCACATTCCAAACACTTCCACCTGGACACTATCTaGGCCCCAGAGGCTGAGAAC +
Preference number: 4 (lower is better)
Translates to: MLTVETTSSILTAHSKHFHLDTI*APEAEN
Trigger: GTTCTCAGCCTCTGGGGCCCAGATAGTGTCCAGGTG...GAAGTGTTTGGAATGTGCTGTAAGAATGGAGGAAGTCGTTTCCACTGTCAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp GAAACGACTTCCTCCATTCTTACAGCACATTCCAAACACTTCTTGGGAACAAGGGGGTCTTCGAGGGGCTaGGGTCCATCATGGAAAGTG +
Preference number: 4 (lower is better)
Translates to: ETTSSILTAHSKHFLGTRGSSRG*GPSWKV
Trigger: CACTTTCCATGATGGACCCCAGCCCCTCGAAGACCC...CCTTGTTCCCAAGAAGTGTTTGGAATGTGCTGTAAGAATGGAGGAAGTCGTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp ACATTCCAAACACTTCTTGGGAACAAGGTTACATCCAGCCTTGGGGGTCTTCCAACCGAGCCATCTGCCTaGCAGATGCATAACTCACAG +
Preference number: 4 (lower is better)
Translates to: TFQTLLGNKVTSSLGGLPTEPSA*QMHNSQ
Trigger: CTGTGAGTTATGCATCTGCCAGGCAGATGGCTCGGT...TGGAAGACCCCCAAGGCTGGATGTAACCTTGTTCCCAAGAAGTGTTTGGAATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335613.10
ENST00000613271.4
CDS-3UTR TCA 90 bp GATGCTGACAGTGGAAACGACTTCCTCCATTCTTACAGCACATTCCAAACACTTTGTCCAGCGACTCCTTaGTTCATGCATGGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: DADSGNDFLHSYSTFQTLCPATP*FMHGSQ
Trigger: CTGGGAGCCATGCATGAATCAAGGAGTCGCTGGACA...AAGTGTTTGGAATGTGCTGTAAGAATGGAGGAAGTCGTTTCCACTGTCAGCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR TCA 90 bp GATGCTGACAGTGGAAACGACTTCCTCCATTCTTACAGCACATTCCAAACACTTCGGACGACACCACTGTaGAAACAGCCTGTGCACGAT +
Preference number: 4 (lower is better)
Translates to: DADSGNDFLHSYSTFQTLRTTPL*KQPVHD
Trigger: ATCGTGCACAGGCTGTTTTCACAGTGGTGTCGTCCG...AAGTGTTTGGAATGTGCTGTAAGAATGGAGGAAGTCGTTTCCACTGTCAGCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR GCA 90 bp AGTGGAAACGACTTCCTCCATTCTTACAGCACATTCCAAACACTTCTTGGGAACCGACTCCTTGATTCATaGATGGCTCCCAGGTGCCAG +
Preference number: 4 (lower is better)
Translates to: SGNDFLHSYSTFQTLLGNRLLDS*MAPRCQ
Trigger: CTGGCACCTGGGAGCCATGCATGAATCAAGGAGTCG...GTTCCCAAGAAGTGTTTGGAATGTGCTGTAAGAATGGAGGAAGTCGTTTCCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR GCA 90 bp ACCTTTAATCAGGAAACCTCAGAGAGACGCATGACACCTGGCGGTACAGTCCCATGTTATAGAAGATTCTaGCTGTGTAGGTGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: TFNQETSERRMTPGGTVPCYRRF*LCRCSL
Trigger: CAGGCTGCACCTACACAGGCAGAATCTTCTATAACA...TGGGACTGTACCGCCAGGTGTCATGCGTCTCTCTGAGGTTTCCTGATTAAAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR GCA 90 bp GACTTCCTCCATTCTTACAGCACATTCCAAACACTTCTTGGGAACAAGGTTACAGCCTCAGTGTCTCCATaGAGGCTCCGACCAGCTTTG +
Preference number: 4 (lower is better)
Translates to: DFLHSYSTFQTLLGNKVTASVSP*RLRPAL
Trigger: CAAAGCTGGTCGGAGCCTGCATGGAGACACTGAGGC...TGTAACCTTGTTCCCAAGAAGTGTTTGGAATGTGCTGTAAGAATGGAGGAAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301770.10
ENST00000335613.10
CDS-3UTR CCA 90 bp CAGTGGAAACGACTTCCTCCATTCTTACAGCACATTCCAAACACTTCTTGGGAAGCAACAGAAGCATCTTaGACGGGTGTTGCCGGGGTT +
Preference number: 4 (lower is better)
Translates to: QWKRLPPFLQHIPNTSWEATEAS*TGVAGV
Trigger: AACCCCGGCAACACCCGTCCAAGATGCTTCTGTTGC...TTCCCAAGAAGTGTTTGGAATGTGCTGTAAGAATGGAGGAAGTCGTTTCCACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp ATGCTGACAGTGGAAACGACTTCCTCCATTCTTACAGCACATTCCAAACACTTCAGCACCCACCATCTCTaGAGGGAATTGGGTGGGAAC +
Preference number: 4 (lower is better)
Translates to: MLTVETTSSILTAHSKHFSTHHL*RELGGN
Trigger: GTTCCCACCCAATTCCCTCCAGAGATGGTGGGTGCT...GAAGTGTTTGGAATGTGCTGTAAGAATGGAGGAAGTCGTTTCCACTGTCAGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp TCCTCCAGGAGAACTTGGCAGTCCCAACCCTTCTCAAAAGATGAGCCAGCCACGGAAATAGCATCTCACTaGAACACAAGTACAGCAATC +
Preference number: 4 (lower is better)
Translates to: SSRRTWQSQPFSKDEPATEIASH*NTSTAI
Trigger: GATTGCTGTACTTGTGTTCCAGTGAGATGCTATTTC...CGTGGCTGGCTCATCTTTTGAGAAGGGTTGGGACTGCCAAGTTCTCCTGGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp GATGCTGACAGTGGAAACGACTTCCTCCATTCTTACAGCACATTCCAAACACTTGGCTGGGGTCCATCATaGAAAGTGCTGAAGCTTCCG +
Preference number: 4 (lower is better)
Translates to: DADSGNDFLHSYSTFQTLGWGPS*KVLKLP
Trigger: CGGAAGCTTCAGCACTTTCCATGATGGACCCCAGCC...AAGTGTTTGGAATGTGCTGTAAGAATGGAGGAAGTCGTTTCCACTGTCAGCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp GAAACGACTTCCTCCATTCTTACAGCACATTCCAAACACTTCTTGGGAACAAGGGGCTGGGGTCCATCATaGAAAGTGCTGAAGCTTCCG +
Preference number: 4 (lower is better)
Translates to: ETTSSILTAHSKHFLGTRGWGPS*KVLKLP
Trigger: CGGAAGCTTCAGCACTTTCCATGATGGACCCCAGCC...CCTTGTTCCCAAGAAGTGTTTGGAATGTGCTGTAAGAATGGAGGAAGTCGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp GCTGACAGTGGAAACGACTTCCTCCATTCTTACAGCACATTCCAAACACTTCTTGGTTACATCCAGCCTTaGGGGTCTTCCATCCTCACC +
Preference number: 4 (lower is better)
Translates to: ADSGNDFLHSYSTFQTLLGYIQP*GSSILT
Trigger: GGTGAGGATGGAAGACCCCCAAGGCTGGATGTAACC...AAGAAGTGTTTGGAATGTGCTGTAAGAATGGAGGAAGTCGTTTCCACTGTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp CTTCCTCCATTCTTACAGCACATTCCAAACACTTCTTGGGAACAAGGTTACATCGAGACGCATGACACCTaGCGGTACAGTCCCAGTGAG +
Preference number: 4 (lower is better)
Translates to: LPPFLQHIPNTSWEQGYIETHDT*RYSPSE
Trigger: CTCACTGGGACTGTACCGCCAGGTGTCATGCGTCTC...GATGTAACCTTGTTCCCAAGAAGTGTTTGGAATGTGCTGTAAGAATGGAGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR TCA 90 bp GGGAGGATGCTGACAGTGGAAACGACTTCCTCCATTCTTACAGCACATTCCAAATTTTTACATCTCTGCTaGCAGGGAGTCCCTAGGCAT +
Preference number: 4 (lower is better)
Translates to: GRMLTVETTSSILTAHSKFLHLC*QGVPRH
Trigger: ATGCCTAGGGACTCCCTGTCAGCAGAGATGTAAAAA...TTTGGAATGTGCTGTAAGAATGGAGGAAGTCGTTTCCACTGTCAGCATCCTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR TCA 90 bp GCTGACAGTGGAAACGACTTCCTCCATTCTTACAGCACATTCCAAACACTTCTTTTGTGGCAGGAATGGTaGCAGACTCGCCTCTCCAAT +
Preference number: 4 (lower is better)
Translates to: ADSGNDFLHSYSTFQTLLLWQEW*QTRLSN
Trigger: ATTGGAGAGGCGAGTCTGTCACCATTCCTGCCACAA...AAGAAGTGTTTGGAATGTGCTGTAAGAATGGAGGAAGTCGTTTCCACTGTCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR GCA 90 bp CTTCCTCCATTCTTACAGCACATTCCAAACACTTCTTGGGAACAAGGTTACATCCACAGTCTGTCCTCTTaGAGCTCACCGAGCCATCTG +
Preference number: 4 (lower is better)
Translates to: LPPFLQHIPNTSWEQGYIHSLSS*SSPSHL
Trigger: CAGATGGCTCGGTGAGCTGCAAGAGGACAGACTGTG...GATGTAACCTTGTTCCCAAGAAGTGTTTGGAATGTGCTGTAAGAATGGAGGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR GCA 90 bp GCTGACAGTGGAAACGACTTCCTCCATTCTTACAGCACATTCCAAACACTTCTTTTCTGCCTGTGTAGGTaGAGCCTGCTGAACAGTCTG +
Preference number: 4 (lower is better)
Translates to: ADSGNDFLHSYSTFQTLLFCLCR*SLLNSL
Trigger: CAGACTGTTCAGCAGGCTGCACCTACACAGGCAGAA...AAGAAGTGTTTGGAATGTGCTGTAAGAATGGAGGAAGTCGTTTCCACTGTCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR GCA 90 bp GCTGACAGTGGAAACGACTTCCTCCATTCTTACAGCACATTCCAAACACTTCTTCATCTGCCTGGCAGATaGATAACTCACAGGGGTCAC +
Preference number: 4 (lower is better)
Translates to: ADSGNDFLHSYSTFQTLLHLPGR*ITHRGH
Trigger: GTGACCCCTGTGAGTTATGCATCTGCCAGGCAGATG...AAGAAGTGTTTGGAATGTGCTGTAAGAATGGAGGAAGTCGTTTCCACTGTCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp GCTGACAGTGGAAACGACTTCCTCCATTCTTACAGCACATTCCAAACACTTCTTTCCACCTCCCCATTCTaGCAAACACAGGTGGTACAC +
Preference number: 4 (lower is better)
Translates to: ADSGNDFLHSYSTFQTLLSTSPF*QTQVVH
Trigger: GTGTACCACCTGTGTTTGCCAGAATGGGGAGGTGGA...AAGAAGTGTTTGGAATGTGCTGTAAGAATGGAGGAAGTCGTTTCCACTGTCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp GATGCTGACAGTGGAAACGACTTCCTCCATTCTTACAGCACATTCCAAACACTTTCCAAGGTGAACACCTaGCCATTCGCCACCTTCCTT +
Preference number: 4 (lower is better)
Translates to: DADSGNDFLHSYSTFQTLSKVNT*PFATFL
Trigger: AAGGAAGGTGGCGAATGGCCAGGTGTTCACCTTGGA...AAGTGTTTGGAATGTGCTGTAAGAATGGAGGAAGTCGTTTCCACTGTCAGCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp ATGCTGACAGTGGAAACGACTTCCTCCATTCTTACAGCACATTCCAAACACTTCTCCTCCAGGAGAACTTaGCAGTCCCAACCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: MLTVETTSSILTAHSKHFSSRRT*QSQPFS
Trigger: TGAGAAGGGTTGGGACTGCCAAGTTCTCCTGGAGGA...GAAGTGTTTGGAATGTGCTGTAAGAATGGAGGAAGTCGTTTCCACTGTCAGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp CTTCCTCCATTCTTACAGCACATTCCAAACACTTCTTGGGAACAAGGTTACATCTACAGTCCCAGTGAGTaGAATCCCAGCCGGACGCAA +
Preference number: 4 (lower is better)
Translates to: LPPFLQHIPNTSWEQGYIYSPSE*NPSRTQ
Trigger: TTGCGTCCGGCTGGGATTCCACTCACTGGGACTGTA...GATGTAACCTTGTTCCCAAGAAGTGTTTGGAATGTGCTGTAAGAATGGAGGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR GCA 90 bp CTTCCTCCATTCTTACAGCACATTCCAAACACTTCTTGGGAACAAGGTTACATCGACAGACACAGACGGTaGAGTTCTCATTGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: LPPFLQHIPNTSWEQGYIDRHRR*SSHWEV
Trigger: CACCTCCCAATGAGAACTGCACCGTCTGTGTCTGTC...GATGTAACCTTGTTCCCAAGAAGTGTTTGGAATGTGCTGTAAGAATGGAGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp CTTCCTCCATTCTTACAGCACATTCCAAACACTTCTTGGGAACAAGGTTACATCACCGAGCCATCTGCCTaGCAGATGCATAACTCACAG +
Preference number: 4 (lower is better)
Translates to: LPPFLQHIPNTSWEQGYITEPSA*QMHNSQ
Trigger: CTGTGAGTTATGCATCTGCCAGGCAGATGGCTCGGT...GATGTAACCTTGTTCCCAAGAAGTGTTTGGAATGTGCTGTAAGAATGGAGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335613.10
ENST00000613271.4
3UTR CAA 72 bp ACTTCCTCCATTCTTACAGCACATTCCAAACACTTCTaGGGAACAAGGTTACATCCAGCCTTGGGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: TSSILTAHSKHF*GTRLHPALGVF
Trigger: GAAGACCCCCAAGGCTGGATGTAACCTTGTTCCCAAGAAGTGTTTGGAATGTGCTGTAAGAATGGAGGAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR TCA 90 bp CAGTGGAAACGACTTCCTCCATTCTTACAGCACATTCCAAACACTTCTTGGGAATTTTTACATCTCTGCTaGCAGGGAGTCCCTAGGCAT +
Preference number: 4 (lower is better)
Translates to: QWKRLPPFLQHIPNTSWEFLHLC*QGVPRH
Trigger: ATGCCTAGGGACTCCCTGTCAGCAGAGATGTAAAAA...TTCCCAAGAAGTGTTTGGAATGTGCTGTAAGAATGGAGGAAGTCGTTTCCACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR GCA 90 bp GACTTCCTCCATTCTTACAGCACATTCCAAACACTTCTTGGGAACAAGGTTACAACCAGCTTTGCTGAATaGCACATTTCCGTGAGGGGA +
Preference number: 4 (lower is better)
Translates to: DFLHSYSTFQTLLGNKVTTSFAE*HISVRG
Trigger: TCCCCTCACGGAAATGTGGCATTCAGCAAAGCTGGT...TGTAACCTTGTTCCCAAGAAGTGTTTGGAATGTGCTGTAAGAATGGAGGAAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301770.10
ENST00000335613.10
CDS-3UTR CCA 90 bp AACTCTTCCTCCAGGAGAACTTGGCAGTCCCAACCCTTCTCAAAAGATGAGCCAATTCCAAACACTTCTTaGGAACAAGGTTACATCCAG +
Preference number: 4 (lower is better)
Translates to: NSSSRRTWQSQPFSKDEPIPNTS*EQGYIQ
Trigger: CTGGATGTAACCTTGTTCCCAAGAAGTGTTTGGAAT...TGGCTCATCTTTTGAGAAGGGTTGGGACTGCCAAGTTCTCCTGGAGGAAGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR GCA 90 bp TGTAGCTGCCAATGCTGTTTTTACATCTCTGCTGACAGGGAGTCCCTAGGCATTACTTGTAGCTGCCAATaGTGTTTTTACATCTCTGCT +
Preference number: 4 (lower is better)
Translates to: CSCQCCFYISADRESLGITCSCQ*CFYISA
Trigger: AGCAGAGATGTAAAAACAGCATTGGCAGCTACAAGT...AATGCCTAGGGACTCCCTGTCAGCAGAGATGTAAAAACAGCATTGGCAGCTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000535599.1
CDS-3UTR GCA 90 bp AGTGGAAACGACTTCCTCCATTCTTACAGCACATTCCAAACACTTCTTGGGAACTGTTATAGAAGATTCTaGCTGTGTAGGTGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: SGNDFLHSYSTFQTLLGNCYRRF*LCRCSL
Trigger: CAGGCTGCACCTACACAGGCAGAATCTTCTATAACA...GTTCCCAAGAAGTGTTTGGAATGTGCTGTAAGAATGGAGGAAGTCGTTTCCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR GCA 90 bp CAGTGGAAACGACTTCCTCCATTCTTACAGCACATTCCAAACACTTCTTGGGAAACTTGTAGCTGCCAATaGTGTTTTTACATCTCTGCT +
Preference number: 4 (lower is better)
Translates to: QWKRLPPFLQHIPNTSWETCSCQ*CFYISA
Trigger: AGCAGAGATGTAAAAACAGCATTGGCAGCTACAAGT...TTCCCAAGAAGTGTTTGGAATGTGCTGTAAGAATGGAGGAAGTCGTTTCCACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR GCA 90 bp ATGCTGACAGTGGAAACGACTTCCTCCATTCTTACAGCACATTCCAAACACTTCACTTGTAGCTGCCAATaGTGTTTTTACATCTCTGCT +
Preference number: 4 (lower is better)
Translates to: MLTVETTSSILTAHSKHFTCSCQ*CFYISA
Trigger: AGCAGAGATGTAAAAACAGCATTGGCAGCTACAAGT...GAAGTGTTTGGAATGTGCTGTAAGAATGGAGGAAGTCGTTTCCACTGTCAGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp GATGCTGACAGTGGAAACGACTTCCTCCATTCTTACAGCACATTCCAAACACTTATTCCAAACACTTCTTaGGAACAAGGTTACATCCAG +
Preference number: 4 (lower is better)
Translates to: DADSGNDFLHSYSTFQTLIPNTS*EQGYIQ
Trigger: CTGGATGTAACCTTGTTCCCAAGAAGTGTTTGGAAT...AAGTGTTTGGAATGTGCTGTAAGAATGGAGGAAGTCGTTTCCACTGTCAGCATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CCA 90 bp GACTTCCTCCATTCTTACAGCACATTCCAAACACTTCTTGGGAACAAGGTTACAGAAATAGCATCTCACTaGAACACAAGTACAGCAATC +
Preference number: 4 (lower is better)
Translates to: DFLHSYSTFQTLLGNKVTEIASH*NTSTAI
Trigger: GATTGCTGTACTTGTGTTCCAGTGAGATGCTATTTC...TGTAACCTTGTTCCCAAGAAGTGTTTGGAATGTGCTGTAAGAATGGAGGAAGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS CCA 90 bp GGCCGCGAAGTGCCCGGGCGGCTTCCTCCCGGTGTAGCCTCGGGCTaGTGCCCCCGGCAGCAGGAGCGCGACACAGGCGGCCCGAAGGAG +
Preference number: 5 (lower is better)
Translates to: GREVPGRLPPGVASG*CPRQQERDTGGPKE
Trigger: CTCCTTCGGGCCGCCTGTGTCGCGCTCCTGCTGCCGGGGGCACCAGCCCGAGGCTACACCGGGAGGAAGCCGCCCGGGCACTTCGCGGCC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000535599.1
ENST00000538579.1
CDS GCA 90 bp CGCGAAGTGCCCGGGCGGCTTCCTCCCGGTGTAGCCTCGGGCTGGTaGCCCCGGCAGCAGGAGCGCGACACAGGCGGCCCGAAGGAGCAG +
Preference number: 5 (lower is better)
Translates to: REVPGRLPPGVASGW*PRQQERDTGGPKEQ
Trigger: CTGCTCCTTCGGGCCGCCTGTGTCGCGCTCCTGCTGCCGGGGGCACCAGCCCGAGGCTACACCGGGAGGAAGCCGCCCGGGCACTTCGCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000535599.1
ENST00000538579.1
CDS CCA 90 bp TTGACAGCACCGGAGGGAGACTGCGGCCAGCCTGAGGCCAGCCTCTaGAGGGGCCAGGACGCTTGTCTCCTCTGGGTGAGGCGGGGCAGC +
Preference number: 5 (lower is better)
Translates to: LTAPEGDCGQPEASL*RGQDACLLWVRRGS
Trigger: GCTGCCCCGCCTCACCCAGAGGAGACAAGCGTCCTGGCCCCTCCAGAGGCTGGCCTCAGGCTGGCCGCAGTCTCCCTCCGGTGCTGTCAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398808.3
CDS GCA 90 bp GGAGAAGACTTGGGGCACAGGGACAAGCACTTACGCAGGGTGCAGTaGCCACCACCCATAGAGGGCGCCCAGCCAGGGCAGCAGCCACTC +
Preference number: 5 (lower is better)
Translates to: GEDLGHRDKHLRRVQ*PPPIEGAQPGQQPL
Trigger: GAGTGGCTGCTGCCCTGGCTGGGCGCCCTCTATGGGTGGTGGGCACTGCACCCTGCGTAAGTGCTTGTCCCTGTGCCCCAAGTCTTCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535599.1
CDS TCA 90 bp GTGAAAGTGGAACTTGACAGCACCGGAGGGAGACTGCGGCCAGCCTaGGGCCAGCCTCTGGAGGGGCCAGGACGCTTGTCTCCTCTGGGT +
Preference number: 5 (lower is better)
Translates to: VKVELDSTGGRLRPA*GQPLEGPGRLSPLG
Trigger: ACCCAGAGGAGACAAGCGTCCTGGCCCCTCCAGAGGCTGGCCTCAGGCTGGCCGCAGTCTCCCTCCGGTGCTGTCAAGTTCCACTTTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398808.3
CDS GCA 90 bp AGAGGAGAAGTGCAGGTGAGACACGAGGAACTGGGGCCTCCCGTCTaGCCCTCGGACCAGGGACTGAGGGCTGGCAACACACACTGCTGG +
Preference number: 5 (lower is better)
Translates to: RGEVQVRHEELGPPV*PSDQGLRAGNTHCW
Trigger: CCAGCAGTGTGTGTTGCCAGCCCTCAGTCCCTGGTCCGAGGGGCAGACGGGAGGCCCCAGTTCCTCGTGTCTCACCTGCACTTCTCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535599.1
CDS CCA 90 bp CCATTACCCCTCCCAGAGCAGCCATTCCTTCTCTGCAGCTCACCTTaGCAGCTGTGGCGGTCGGCAGACAGCTGCATGCCCGGCCCACAC +
Preference number: 5 (lower is better)
Translates to: PLPLPEQPFLLCSSP*QLWRSADSCMPGPH
Trigger: GTGTGGGCCGGGCATGCAGCTGTCTGCCGACCGCCACAGCTGCCAAGGTGAGCTGCAGAGAAGGAATGGCTGCTCTGGGAGGGGTAATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538579.1
CDS TCA 90 bp GTCTCCGTCATCGAGAAGCCCACGGGGCACACTCGGGCCACCTCCTaGCAGCCTCCATGGTTGCAGGTAAGGTCACAGCCGTACTCCCCA +
Preference number: 5 (lower is better)
Translates to: VSVIEKPTGHTRATS*QPPWLQVRSQPYSP
Trigger: TGGGGAGTACGGCTGTGACCTTACCTGCAACCATGGAGGCTGTCAGGAGGTGGCCCGAGTGTGCCCCGTGGGCTTCTCGATGACGGAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000535599.1
ENST00000538579.1
ENST00000613271.4
CDS GCA 90 bp CCCGTCTGCCCCTCGGACCAGGGACTGAGGGCTGGCAACACACACTaGTGGAGGAGAAGACTTGGGGCACAGGGACAAGCACTTACGCAG +
Preference number: 5 (lower is better)
Translates to: PVCPSDQGLRAGNTH*WRRRLGAQGQALTQ
Trigger: CTGCGTAAGTGCTTGTCCCTGTGCCCCAAGTCTTCTCCTCCAGCAGTGTGTGTTGCCAGCCCTCAGTCCCTGGTCCGAGGGGCAGACGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535599.1
CDS CCA 90 bp GAAAGCACGCGAGGCCCGAGGAGGGTGATGGGGTCTTCGAGGGGCTaGGGTCCATCATGGAAAGTGCTGAAGCTTCCGTCAGGAGGGTGC +
Preference number: 5 (lower is better)
Translates to: ESTRGPRRVMGSSRG*GPSWKVLKLPSGGC
Trigger: GCACCCTCCTGACGGAAGCTTCAGCACTTTCCATGATGGACCCCAGCCCCTCGAAGACCCCATCACCCTCCTCGGGCCTCGCGTGCTTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613271.4
CDS-3UTR CAA 90 bp AAGGGCTGTGGAGAGTCTAGAGGTGGTGGGAGAAAGCACGCGAGGCCCGAGGAGGCATTCGTCAGTGTCTaGGCAGCTGTGGCGGTCGGC +
Preference number: 5 (lower is better)
Translates to: KGCGESRGGGRKHARPEEAFVSV*AAVAVG
Trigger: GCCGACCGCCACAGCTGCCAAGACACTGACGAATGC...CTCCTCGGGCCTCGCGTGCTTTCTCCCACCACCTCTAGACTCTCCACAGCCCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301770.10
CDS-3UTR CAA 90 bp GAGTGGAATCCCAGCCGGACGCAACTCTTCCTCCAGGAGAACTTGGCAGTCCCACGGGTGTTGCCGGGGTaGCAGGATGGCAGATGGGGC +
Preference number: 5 (lower is better)
Translates to: EWNPSRTQLFLQENLAVPRVLPG*QDGRWG
Trigger: GCCCCATCTGCCATCCTGCAACCCCGGCAACACCCG...TGGGACTGCCAAGTTCTCCTGGAGGAAGAGTTGCGTCCGGCTGGGATTCCACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CAA 90 bp AGTCCCAACCCTTCTCAAAAGATGAGCCAGCCACGCGGTCCAGGGAGGATGCTGGGACGCGGCGGACGATaGTGGGGAGGGTCTCTGGCA +
Preference number: 5 (lower is better)
Translates to: SPNPSQKMSQPRGPGRMLGRGGR*WGGSLA
Trigger: TGCCAGAGACCCTCCCCACAATCGTCCGCCGCGTCC...CAGCATCCTCCCTGGACCGCGTGGCTGGCTCATCTTTTGAGAAGGGTTGGGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335613.10
CDS GCA 90 bp TCTGCAGCTCACCTTGGCAGCTGTGGCGGTCGGCAGACAGCTGCATaGCCGGCCCACACTCGCACACAAACCCACCTTCTGTGTTCACAC +
Preference number: 5 (lower is better)
Translates to: SAAHLGSCGGRQTAA*PAHTRTQTHLLCSH
Trigger: GTGTGAACACAGAAGGTGGGTTTGTGTGCGAGTGTGGGCCGGGCATGCAGCTGTCTGCCGACCGCCACAGCTGCCAAGGTGAGCTGCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538579.1
CDS GCA 90 bp CTTCTCTGCAGCTCACCTTGGCAGCTGTGGCGGTCGGCAGACAGCTaGATGCCCGGCCCACACTCGCACACAAACCCACCTTCTGTGTTC +
Preference number: 5 (lower is better)
Translates to: LLCSSPWQLWRSADS*MPGPHSHTNPPSVF
Trigger: GAACACAGAAGGTGGGTTTGTGTGCGAGTGTGGGCCGGGCATGCAGCTGTCTGCCGACCGCCACAGCTGCCAAGGTGAGCTGCAGAGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538579.1
CDS-3UTR CAA 90 bp CAGGAGGGAGCCCAGGCATCCCCACCAGGTTCATCCTTGGAGCTGCCCTGCACATGGCAGGAGCAGACATaGGGAGCGATGCAGATGCCA +
Preference number: 5 (lower is better)
Translates to: QEGAQASPPGSSLELPCTWQEQT*GAMQMP
Trigger: TGGCATCTGCATCGCTCCCAATGTCTGCTCCTGCCA...TGTGCAGGGCAGCTCCAAGGATGAACCTGGTGGGGATGCCTGGGCTCCCTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CAA 90 bp AGACGCATGACACCTGGCGGTACAGTCCCAGTGAGTGGAATCCCAGCCGGACGCTGGCAGGAGCAGACATaGGGAGCGATGCAGATGCCA +
Preference number: 5 (lower is better)
Translates to: RRMTPGGTVPVSGIPAGRWQEQT*GAMQMP
Trigger: TGGCATCTGCATCGCTCCCAATGTCTGCTCCTGCCA...GCGTCCGGCTGGGATTCCACTCACTGGGACTGTACCGCCAGGTGTCATGCGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CAA 90 bp GAGTGGAATCCCAGCCGGACGCAACTCTTCCTCCAGGAGAACTTGGCAGTCCCACATCTTGGACGGGTGTaGCCGGGGTTGCAGGATGGC +
Preference number: 5 (lower is better)
Translates to: EWNPSRTQLFLQENLAVPHLGRV*PGLQDG
Trigger: GCCATCCTGCAACCCCGGCAACACCCGTCCAAGATG...TGGGACTGCCAAGTTCTCCTGGAGGAAGAGTTGCGTCCGGCTGGGATTCCACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CAA 90 bp CAGGAGGGAGCCCAGGCATCCCCACCAGGTTCATCCTTGGAGCTGCCCTGCACAACACAGTCTGTCCTCTaGCAGCTCACCGAGCCATCT +
Preference number: 5 (lower is better)
Translates to: QEGAQASPPGSSLELPCTTQSVL*QLTEPS
Trigger: AGATGGCTCGGTGAGCTGCAAGAGGACAGACTGTGT...TGTGCAGGGCAGCTCCAAGGATGAACCTGGTGGGGATGCCTGGGCTCCCTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CAA 90 bp CAAAAGATGAGCCAGCCACGCGGTCCAGGGAGGATGCTGACAGTGGAAACGACTCATCTTGGACGGGTGTaGCCGGGGTTGCAGGATGGC +
Preference number: 5 (lower is better)
Translates to: QKMSQPRGPGRMLTVETTHLGRV*PGLQDG
Trigger: GCCATCCTGCAACCCCGGCAACACCCGTCCAAGATG...AGTCGTTTCCACTGTCAGCATCCTCCCTGGACCGCGTGGCTGGCTCATCTTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CAA 90 bp CCTGGGCCACTGGCAGAGGTCCTCTCTCCAGAGTCTCCCGGACACAGTGACCTCCATCTCTGGAGGGAATaGGGTGGGAACAAGCAGCTT +
Preference number: 5 (lower is better)
Translates to: PGPLAEVLSPESPGHSDLHLWRE*GGNKQL
Trigger: AAGCTGCTTGTTCCCACCCAATTCCCTCCAGAGATG...GAGGTCACTGTGTCCGGGAGACTCTGGAGAGAGGACCTCTGCCAGTGGCCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS GCA 90 bp CCCGCCCTGCAAAAGAAACAGCAACGCTGCAAACTGGCCAAGGCTTaGCCTGAAAGGCAACATGACGCGGCTGGAAGATGGCAGGTCTCC +
Preference number: 5 (lower is better)
Translates to: PALQKKQQRCKLAKA*PERQHDAAGRWQVS
Trigger: GGAGACCTGCCATCTTCCAGCCGCGTCATGTTGCCTTTCAGGGCAAGCCTTGGCCAGTTTGCAGCGTTGCTGTTTCTTTTGCAGGGCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538438.1
CDS CCA 90 bp GCCCACGGTGTTGTGGCAGGAATGGTGACAGACTCGCCTCTCCAATaGCCTCCGACACTCGTTTACATCTACACAGGAGTGCCGGTTGCC +
Preference number: 5 (lower is better)
Translates to: AHGVVAGMVTDSPLQ*PPTLVYIYTGVPVA
Trigger: GGCAACCGGCACTCCTGTGTAGATGTAAACGAGTGTCGGAGGCCATTGGAGAGGCGAGTCTGTCACCATTCCTGCCACAACACCGTGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CAA 90 bp TTCTCAAAAGATGAGCCAGCCACGCGGTCCAGGGAGGATGCTGACAGTGGAAACCATCTTGGACGGGTGTaGCCGGGGTTGCAGGATGGC +
Preference number: 5 (lower is better)
Translates to: FSKDEPATRSREDADSGNHLGRV*PGLQDG
Trigger: GCCATCCTGCAACCCCGGCAACACCCGTCCAAGATG...GTTTCCACTGTCAGCATCCTCCCTGGACCGCGTGGCTGGCTCATCTTTTGAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CAA 90 bp CAGTCCCAACCCTTCTCAAAAGATGAGCCAGCCACGCGGTCCAGGGAGGATGCTAGCAACAGAAGCATCTaGGACGGGTGTTGCCGGGGT +
Preference number: 5 (lower is better)
Translates to: QSQPFSKDEPATRSREDASNRSI*DGCCRG
Trigger: ACCCCGGCAACACCCGTCCAAGATGCTTCTGTTGCT...AGCATCCTCCCTGGACCGCGTGGCTGGCTCATCTTTTGAGAAGGGTTGGGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CAA 90 bp GAGGGCAGGAGTCCACACAGTCTGTCCTCTTGCAGCTCACCGAGCCATCTGCCTCTGTCCAGCGACTCCTaGATTCATGCATGGCTCCCA +
Preference number: 5 (lower is better)
Translates to: EGRSPHSLSSCSSPSHLPLSSDS*IHAWLP
Trigger: TGGGAGCCATGCATGAATCAAGGAGTCGCTGGACAG...AGGCAGATGGCTCGGTGAGCTGCAAGAGGACAGACTGTGTGGACTCCTGCCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301770.10
CDS-3UTR CAA 90 bp CAAAAGATGAGCCAGCCACGCGGTCCAGGGAGGATGCTGACAGTGGAAACGACTGGACAGGAGCTACAGTaGACAGGGGCCTCTGTCTCC +
Preference number: 5 (lower is better)
Translates to: QKMSQPRGPGRMLTVETTGQELQ*TGASVS
Trigger: GGAGACAGAGGCCCCTGTCAACTGTAGCTCCTGTCC...AGTCGTTTCCACTGTCAGCATCCTCCCTGGACCGCGTGGCTGGCTCATCTTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613271.4
CDS-3UTR CAA 90 bp GAGTGGAATCCCAGCCGGACGCAACTCTTCCTCCAGGAGAACTTGGCAGTCCCAACACAGTCTGTCCTCTaGCAGCTCACCGAGCCATCT +
Preference number: 5 (lower is better)
Translates to: EWNPSRTQLFLQENLAVPTQSVL*QLTEPS
Trigger: AGATGGCTCGGTGAGCTGCAAGAGGACAGACTGTGT...TGGGACTGCCAAGTTCTCCTGGAGGAAGAGTTGCGTCCGGCTGGGATTCCACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS CCA 90 bp GGCAGCCAGGTAAAGCAGCTGAAGGCGAGCAGGTTGTCATTCACCTaGCAGATGCATAACTCACAGGGGTCACCAGGCGACCAGATCTGT +
Preference number: 5 (lower is better)
Translates to: GSQVKQLKASRLSFT*QMHNSQGSPGDQIC
Trigger: ACAGATCTGGTCGCCTGGTGACCCCTGTGAGTTATGCATCTGCCAGGTGAATGACAACCTGCTCGCCTTCAGCTGCTTTACCTGGCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398808.3
CDS CCA 90 bp CTGGCCAAGGCTTGCCCTGAAAGGCAACATGACGCGGCTGGAAGATaGCAGGTCTCCCCTAAAGAGGATCGGCTACTTGAGAAAGGCCAT +
Preference number: 5 (lower is better)
Translates to: LAKACPERQHDAAGR*QVSPKEDRLLEKGH
Trigger: ATGGCCTTTCTCAAGTAGCCGATCCTCTTTAGGGGAGACCTGCCATCTTCCAGCCGCGTCATGTTGCCTTTCAGGGCAAGCCTTGGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538438.1
CDS-3UTR CAA 90 bp ACGATGGGCAGCACCCACCATCTCTGGAGGGAATTGGGTGGGAACAAGCAGCTTGGAAACTCAACCCCGTaGTCGTCAAGAGAGCAGCCT +
Preference number: 5 (lower is better)
Translates to: TMGSTHHLWRELGGNKQLGNSTP*SSREQP
Trigger: AGGCTGCTCTCTTGACGACAACGGGGTTGAGTTTCC...AAGCTGCTTGTTCCCACCCAATTCCCTCCAGAGATGGTGGGTGCTGCCCATCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301770.10
CDS-3UTR CAA 90 bp CCAATCGGAAACTCAACCCCGTTGTCGTCAAGAGAGCAGCCTGTCGAGGGTGTGACACAGTCTGTCCTCTaGCAGCTCACCGAGCCATCT +
Preference number: 5 (lower is better)
Translates to: PIGNSTPLSSREQPVEGVTQSVL*QLTEPS
Trigger: AGATGGCTCGGTGAGCTGCAAGAGGACAGACTGTGT...CACACCCTCGACAGGCTGCTCTCTTGACGACAACGGGGTTGAGTTTCCGATTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301770.10
CDS-3UTR CAA 90 bp CAGCCACGCGGTCCAGGGAGGATGCTGACAGTGGAAACGACTTCCTCCATTCTTTTCCTCCAGGAGAACTaGGCAGTCCCAACCCTTCTC +
Preference number: 5 (lower is better)
Translates to: QPRGPGRMLTVETTSSILFLQEN*AVPTLL
Trigger: GAGAAGGGTTGGGACTGCCAAGTTCTCCTGGAGGAA...AAGAATGGAGGAAGTCGTTTCCACTGTCAGCATCCTCCCTGGACCGCGTGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CAA 90 bp CCCAGTGAGTGGAATCCCAGCCGGACGCAACTCTTCCTCCAGGAGAACTTGGCAACGGTGCAGTTCTCATaGGGAGGTGAAAACACATCC +
Preference number: 5 (lower is better)
Translates to: PSEWNPSRTQLFLQENLATVQFS*GGENTS
Trigger: GGATGTGTTTTCACCTCCCAATGAGAACTGCACCGT...TGCCAAGTTCTCCTGGAGGAAGAGTTGCGTCCGGCTGGGATTCCACTCACTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CAA 90 bp GGAAACCTCAGAGAGACGCATGACACCTGGCGGTACAGTCCCAGTGAGTGGAATAGGCTCCGACCAGCTTaGCTGAATGCCACATTTCCG +
Preference number: 5 (lower is better)
Translates to: GNLRETHDTWRYSPSEWNRLRPA*LNATFP
Trigger: CGGAAATGTGGCATTCAGCAAAGCTGGTCGGAGCCT...ATTCCACTCACTGGGACTGTACCGCCAGGTGTCATGCGTCTCTCTGAGGTTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301770.10
ENST00000335613.10
CDS-3UTR CAA 90 bp GCTGACAGTGGAAACGACTTCCTCCATTCTTACAGCACATTCCAAACACTTCTTCGGGTGTTGCCGGGGTaGCAGGATGGCAGATGGGGC +
Preference number: 5 (lower is better)
Translates to: ADSGNDFLHSYSTFQTLLRVLPG*QDGRWG
Trigger: GCCCCATCTGCCATCCTGCAACCCCGGCAACACCCG...AAGAAGTGTTTGGAATGTGCTGTAAGAATGGAGGAAGTCGTTTCCACTGTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CAA 90 bp ACCGAGACAACCTTTAATCAGGAAACCTCAGAGAGACGCATGACACCTGGCGGTAGCAACAGAAGCATCTaGGACGGGTGTTGCCGGGGT +
Preference number: 5 (lower is better)
Translates to: TETTFNQETSERRMTPGGSNRSI*DGCCRG
Trigger: ACCCCGGCAACACCCGTCCAAGATGCTTCTGTTGCT...ACCGCCAGGTGTCATGCGTCTCTCTGAGGTTTCCTGATTAAAGGTTGTCTCGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CAA 90 bp TTCTCAAAAGATGAGCCAGCCACGCGGTCCAGGGAGGATGCTGACAGTGGAAACAGGCTCCGACCAGCTTaGCTGAATGACATTTCCGTG +
Preference number: 5 (lower is better)
Translates to: FSKDEPATRSREDADSGNRLRPA*LNDISV
Trigger: CACGGAAATGTCATTCAGCAAAGCTGGTCGGAGCCT...GTTTCCACTGTCAGCATCCTCCCTGGACCGCGTGGCTGGCTCATCTTTTGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613271.4
CDS TCA 90 bp CACACATCTACTGAGAGCAGGATAAACTCGGTCCAACCCTTTTTGTaGAAGTGGAACTTGACAGCACCGGAGGGAGACTGCGGCCAGCCT +
Preference number: 5 (lower is better)
Translates to: HTSTESRINSVQPFL*KWNLTAPEGDCGQP
Trigger: AGGCTGGCCGCAGTCTCCCTCCGGTGCTGTCAAGTTCCACTTTCACAAAAAGGGTTGGACCGAGTTTATCCTGCTCTCAGTAGATGTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398808.3
CDS-3UTR CAA 90 bp AACTCTTCCTCCAGGAGAACTTGGCAGTCCCAACCCTTCTCAAAAGATGAGCCATGGCAGGAGCAGACATaGGGAGCGATGCAGATGCCA +
Preference number: 5 (lower is better)
Translates to: NSSSRRTWQSQPFSKDEPWQEQT*GAMQMP
Trigger: TGGCATCTGCATCGCTCCCAATGTCTGCTCCTGCCA...TGGCTCATCTTTTGAGAAGGGTTGGGACTGCCAAGTTCTCCTGGAGGAAGAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CAA 90 bp CAGCACATTCCAAACACTTCTTGGGAACAAGGTTACATCCAGCCTTGGGGGTCTAGCAACAGAAGCATCTaGGACGGGTGTTGCCGGGGT +
Preference number: 5 (lower is better)
Translates to: QHIPNTSWEQGYIQPWGSSNRSI*DGCCRG
Trigger: ACCCCGGCAACACCCGTCCAAGATGCTTCTGTTGCT...AGACCCCCAAGGCTGGATGTAACCTTGTTCCCAAGAAGTGTTTGGAATGTGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CAA 90 bp GGAAACCTCAGAGAGACGCATGACACCTGGCGGTACAGTCCCAGTGAGTGGAATACGGTGCAGTTCTCATaGGGAGGTGAAAACACATCC +
Preference number: 5 (lower is better)
Translates to: GNLRETHDTWRYSPSEWNTVQFS*GGENTS
Trigger: GGATGTGTTTTCACCTCCCAATGAGAACTGCACCGT...ATTCCACTCACTGGGACTGTACCGCCAGGTGTCATGCGTCTCTCTGAGGTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CAA 90 bp GCAACTCTTCCTCCAGGAGAACTTGGCAGTCCCAACCCTTCTCAAAAGATGAGCGGAAACTCAACCCCGTaGTCGTCAAGAGAGCAGCCT +
Preference number: 5 (lower is better)
Translates to: ATLPPGELGSPNPSQKMSGNSTP*SSREQP
Trigger: AGGCTGCTCTCTTGACGACAACGGGGTTGAGTTTCC...GCTCATCTTTTGAGAAGGGTTGGGACTGCCAAGTTCTCCTGGAGGAAGAGTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CAA 90 bp CATGAAGGTGGAAGCCAGTTCGACAGGAACACTTGTAGCTGCCAATGCTGTTTTTGGCAGGAGCAGACATaGGGAGCGATGCAGATGCCA +
Preference number: 5 (lower is better)
Translates to: HEGGSQFDRNTCSCQCCFWQEQT*GAMQMP
Trigger: TGGCATCTGCATCGCTCCCAATGTCTGCTCCTGCCA...AAAACAGCATTGGCAGCTACAAGTGTTCCTGTCGAACTGGCTTCCACCTTCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535599.1
CDS-3UTR CAA 90 bp GCAACTCTTCCTCCAGGAGAACTTGGCAGTCCCAACCCTTCTCAAAAGATGAGCCATCTCTGGAGGGAATaGGGTGGGAACAAGCAGCTT +
Preference number: 5 (lower is better)
Translates to: ATLPPGELGSPNPSQKMSHLWRE*GGNKQL
Trigger: AAGCTGCTTGTTCCCACCCAATTCCCTCCAGAGATG...GCTCATCTTTTGAGAAGGGTTGGGACTGCCAAGTTCTCCTGGAGGAAGAGTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CAA 90 bp ACCGAGACAACCTTTAATCAGGAAACCTCAGAGAGACGCATGACACCTGGCGGTCATCTCTGGAGGGAATaGGGTGGGAACAAGCAGCTT +
Preference number: 5 (lower is better)
Translates to: TETTFNQETSERRMTPGGHLWRE*GGNKQL
Trigger: AAGCTGCTTGTTCCCACCCAATTCCCTCCAGAGATG...ACCGCCAGGTGTCATGCGTCTCTCTGAGGTTTCCTGATTAAAGGTTGTCTCGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CAA 90 bp CAGCACATTCCAAACACTTCTTGGGAACAAGGTTACATCCAGCCTTGGGGGTCTGGAAACTCAACCCCGTaGTCGTCAAGAGAGCAGCCT +
Preference number: 5 (lower is better)
Translates to: QHIPNTSWEQGYIQPWGSGNSTP*SSREQP
Trigger: AGGCTGCTCTCTTGACGACAACGGGGTTGAGTTTCC...AGACCCCCAAGGCTGGATGTAACCTTGTTCCCAAGAAGTGTTTGGAATGTGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CAA 90 bp TCCAAACACTTCTTGGGAACAAGGTTACATCCAGCCTTGGGGGTCTTCCATCCTAGGCTCCGACCAGCTTaGCTGAATGCCACATTTCCG +
Preference number: 5 (lower is better)
Translates to: SKHFLGTRLHPALGVFHPRLRPA*LNATFP
Trigger: CGGAAATGTGGCATTCAGCAAAGCTGGTCGGAGCCT...AGGATGGAAGACCCCCAAGGCTGGATGTAACCTTGTTCCCAAGAAGTGTTTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301770.10
ENST00000335613.10
CDS TCA 90 bp GGCAGGTCTCCCCTAAAGAGGATCGGCTACTTGAGAAAGGCCATGTaGGCCTTCCAGGAAGTCTATGCATCTTTAAGGAGAAGGAAGGTC +
Preference number: 5 (lower is better)
Translates to: GRSPLKRIGYLRKAM*AFQEVYASLRRRKV
Trigger: GACCTTCCTTCTCCTTAAAGATGCATAGACTTCCTGGAAGGCTCACATGGCCTTTCTCAAGTAGCCGATCCTCTTTAGGGGAGACCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538438.1
CDS-3UTR CAA 90 bp ACATTCCAAACACTTCTTGGGAACAAGGTTACATCCAGCCTTGGGGGTCTTCCACTGTCCAGCGACTCCTaGATTCATGCATGGCTCCCA +
Preference number: 5 (lower is better)
Translates to: TFQTLLGNKVTSSLGGLPLSSDS*IHAWLP
Trigger: TGGGAGCCATGCATGAATCAAGGAGTCGCTGGACAG...TGGAAGACCCCCAAGGCTGGATGTAACCTTGTTCCCAAGAAGTGTTTGGAATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CAA 90 bp AATCCCAGCCGGACGCAACTCTTCCTCCAGGAGAACTTGGCAGTCCCAACCCTTCATTCCAAACACTTCTaGGGAACAAGGTTACATCCA +
Preference number: 5 (lower is better)
Translates to: NPSRTQLFLQENLAVPTLHSKHF*GTRLHP
Trigger: TGGATGTAACCTTGTTCCCAAGAAGTGTTTGGAATG...AAGGGTTGGGACTGCCAAGTTCTCCTGGAGGAAGAGTTGCGTCCGGCTGGGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS GCA 90 bp GATCGGCTACTTGAGAAAGGCCATGTGAGCCTTCCAGGAAGTCTATaGATCTTTAAGGAGAAGGAAGGTCAGGGTTGGGATTCTGGTCTC +
Preference number: 5 (lower is better)
Translates to: DRLLEKGHVSLPGSL*IFKEKEGQGWDSGL
Trigger: GAGACCAGAATCCCAACCCTGACCTTCCTTCTCCTTAAAGATGCATAGACTTCCTGGAAGGCTCACATGGCCTTTCTCAAGTAGCCGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538438.1
CDS-3UTR CAA 90 bp AACTCTTCCTCCAGGAGAACTTGGCAGTCCCAACCCTTCTCAAAAGATGAGCCAACGGTGCAGTTCTCATaGGGAGGTGAAAACACATCC +
Preference number: 5 (lower is better)
Translates to: NSSSRRTWQSQPFSKDEPTVQFS*GGENTS
Trigger: GGATGTGTTTTCACCTCCCAATGAGAACTGCACCGT...TGGCTCATCTTTTGAGAAGGGTTGGGACTGCCAAGTTCTCCTGGAGGAAGAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CAA 90 bp AGCCGGACGCAACTCTTCCTCCAGGAGAACTTGGCAGTCCCAACCCTTCTCAAACATTCCAAACACTTCTaGGGAACAAGGTTACATCCA +
Preference number: 5 (lower is better)
Translates to: SRTQLFLQENLAVPTLLKHSKHF*GTRLHP
Trigger: TGGATGTAACCTTGTTCCCAAGAAGTGTTTGGAATG...TTTGAGAAGGGTTGGGACTGCCAAGTTCTCCTGGAGGAAGAGTTGCGTCCGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CAA 90 bp AGTGGAAACGACTTCCTCCATTCTTACAGCACATTCCAAACACTTCTTGGGAACTTCCTCCAGGAGAACTaGGCAGTCCCAACCCTTCTC +
Preference number: 5 (lower is better)
Translates to: SGNDFLHSYSTFQTLLGNFLQEN*AVPTLL
Trigger: GAGAAGGGTTGGGACTGCCAAGTTCTCCTGGAGGAA...GTTCCCAAGAAGTGTTTGGAATGTGCTGTAAGAATGGAGGAAGTCGTTTCCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS TCA 90 bp CTTCTTAAGGCCAACTGCCAAGCACCATCGTCCTCACACATCTACTaGGAGCAGGATAAACTCGGTCCAACCCTTTTTGTGAAAGTGGAA +
Preference number: 5 (lower is better)
Translates to: LLKANCQAPSSSHIY*EQDKLGPTLFVKVE
Trigger: TTCCACTTTCACAAAAAGGGTTGGACCGAGTTTATCCTGCTCTCAGTAGATGTGTGAGGACGATGGTGCTTGGCAGTTGGCCTTAAGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398808.3
CDS-3UTR CAA 90 bp GACTTCCTCCATTCTTACAGCACATTCCAAACACTTCTTGGGAACAAGGTTACACTGTCCAGCGACTCCTaGATTCATGCATGGCTCCCA +
Preference number: 5 (lower is better)
Translates to: DFLHSYSTFQTLLGNKVTLSSDS*IHAWLP
Trigger: TGGGAGCCATGCATGAATCAAGGAGTCGCTGGACAG...TGTAACCTTGTTCCCAAGAAGTGTTTGGAATGTGCTGTAAGAATGGAGGAAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CAA 90 bp GACTTCCTCCATTCTTACAGCACATTCCAAACACTTCTTGGGAACAAGGTTACATTCCTCCAGGAGAACTaGGCAGTCCCAACCCTTCTC +
Preference number: 5 (lower is better)
Translates to: DFLHSYSTFQTLLGNKVTFLQEN*AVPTLL
Trigger: GAGAAGGGTTGGGACTGCCAAGTTCTCCTGGAGGAA...TGTAACCTTGTTCCCAAGAAGTGTTTGGAATGTGCTGTAAGAATGGAGGAAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS-3UTR CAA 90 bp GATGCTGACAGTGGAAACGACTTCCTCCATTCTTACAGCACATTCCAAACACTTCATTCCAAACACTTCTaGGGAACAAGGTTACATCCA +
Preference number: 5 (lower is better)
Translates to: DADSGNDFLHSYSTFQTLHSKHF*GTRLHP
Trigger: TGGATGTAACCTTGTTCCCAAGAAGTGTTTGGAATG...AAGTGTTTGGAATGTGCTGTAAGAATGGAGGAAGTCGTTTCCACTGTCAGCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000613271.4
CDS GCA 72 bp CCCGGGCGGCTTCCTCCCGGTGTAGCCTCGGGCTGGTaGCCCCGGCAGCAGGAGCGCGACACAGGCGGCCCG +
Preference number: 6 (lower is better)
Translates to: PGRLPPGVASGW*PRQQERDTGGP
Trigger: CGGGCCGCCTGTGTCGCGCTCCTGCTGCCGGGGGCACCAGCCCGAGGCTACACCGGGAGGAAGCCGCCCGGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000535599.1
ENST00000538579.1
CDS CCA 72 bp GTGCCCGGGCGGCTTCCTCCCGGTGTAGCCTCGGGCTaGTGCCCCCGGCAGCAGGAGCGCGACACAGGCGGC +
Preference number: 6 (lower is better)
Translates to: VPGRLPPGVASG*CPRQQERDTGG
Trigger: GCCGCCTGTGTCGCGCTCCTGCTGCCGGGGGCACCAGCCCGAGGCTACACCGGGAGGAAGCCGCCCGGGCAC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000535599.1
ENST00000538579.1
CDS CCA 72 bp GGGCAGCAGCCACTCCCAAACCCAGAGAGGCAGACGTaGGGGCCCAGTCGGCGTCTCTCGGCCGCGAAGTGC +
Preference number: 6 (lower is better)
Translates to: GQQPLPNPERQT*GPSRRLSAAKC
Trigger: GCACTTCGCGGCCGAGAGACGCCGACTGGGCCCCCACGTCTGCCTCTCTGGGTTTGGGAGTGGCTGCTGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000535599.1
ENST00000538579.1
CDS CCA 72 bp CCGGAGGGAGACTGCGGCCAGCCTGAGGCCAGCCTCTaGAGGGGCCAGGACGCTTGTCTCCTCTGGGTGAGG +
Preference number: 6 (lower is better)
Translates to: PEGDCGQPEASL*RGQDACLLWVR
Trigger: CCTCACCCAGAGGAGACAAGCGTCCTGGCCCCTCCAGAGGCTGGCCTCAGGCTGGCCGCAGTCTCCCTCCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398808.3
CDS GCA 72 bp TTGGGGCACAGGGACAAGCACTTACGCAGGGTGCAGTaGCCACCACCCATAGAGGGCGCCCAGCCAGGGCAG +
Preference number: 6 (lower is better)
Translates to: LGHRDKHLRRVQ*PPPIEGAQPGQ
Trigger: CTGCCCTGGCTGGGCGCCCTCTATGGGTGGTGGGCACTGCACCCTGCGTAAGTGCTTGTCCCTGTGCCCCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535599.1
CDS GCA 72 bp CTGCCAGTGGCTGACGGCAGCTGCGTCCTCCAGAGATaGCTAGATGGTCACCACCCCCACTCCCTGGGGAGC +
Preference number: 6 (lower is better)
Translates to: LPVADGSCVLQR*LDGHHPHSLGS
Trigger: GCTCCCCAGGGAGTGGGGGTGGTGACCATCTAGGCATCTCTGGAGGACGCAGCTGCCGTCAGCCACTGGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535710.1
CDS GCA 72 bp CACCTTGGCAGCTGTGGCGGTCGGCAGACAGCTGCATaGCCGGCCCACACTCGCACACAAACCCACCTTCTG +
Preference number: 6 (lower is better)
Translates to: HLGSCGGRQTAA*PAHTRTQTHLL
Trigger: CAGAAGGTGGGTTTGTGTGCGAGTGTGGGCCGGGCATGCAGCTGTCTGCCGACCGCCACAGCTGCCAAGGTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538579.1
CDS GCA 72 bp AGCTCACCTTGGCAGCTGTGGCGGTCGGCAGACAGCTaGATGCCCGGCCCACACTCGCACACAAACCCACCT +
Preference number: 6 (lower is better)
Translates to: SSPWQLWRSADS*MPGPHSHTNPP
Trigger: AGGTGGGTTTGTGTGCGAGTGTGGGCCGGGCATGCAGCTGTCTGCCGACCGCCACAGCTGCCAAGGTGAGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538579.1
CDS CAA 90 bp CCCATTACCCCTCCCAGAGCAGCCATTCCTTCTCTGCAGCTCACCTaGGCAGCTGTGGCGGTCGGCAGACAGCTGCATGCCCGGCCCACA +
Preference number: 6 (lower is better)
Translates to: PITPPRAAIPSLQLT*AAVAVGRQLHARPT
Trigger: TGTGGGCCGGGCATGCAGCTGTCTGCCGACCGCCACAGCTGCCAAGGTGAGCTGCAGAGAAGGAATGGCTGCTCTGGGAGGGGTAATGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538579.1
CDS CCA 72 bp CTCCCAGAGCAGCCATTCCTTCTCTGCAGCTCACCTTaGCAGCTGTGGCGGTCGGCAGACAGCTGCATGCCC +
Preference number: 6 (lower is better)
Translates to: LPEQPFLLCSSP*QLWRSADSCMP
Trigger: GGGCATGCAGCTGTCTGCCGACCGCCACAGCTGCCAAGGTGAGCTGCAGAGAAGGAATGGCTGCTCTGGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538579.1
CDS CAA 90 bp TCTGGGCAGGTGGCCCCTTGCTCTCCATCCTGGCAGGAGCAGACATaGGGAGCGATGCAGATGCCACTCCCACAGCCGAAGGAGCAGAGG +
Preference number: 6 (lower is better)
Translates to: SGQVAPCSPSWQEQT*GAMQMPLPQPKEQR
Trigger: CCTCTGCTCCTTCGGCTGTGGGAGTGGCATCTGCATCGCTCCCAATGTCTGCTCCTGCCAGGATGGAGAGCAAGGGGCCACCTGCCCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301770.10
ENST00000335613.10
ENST00000535599.1
ENST00000538579.1
CDS GCA 72 bp TCCCCATTACCCCTCCCAGAGCAGCCATTCCTTCTCTaGAGCTCACCTTGGCAGCTGTGGCGGTCGGCAGAC +
Preference number: 6 (lower is better)
Translates to: SPLPLPEQPFLL*SSPWQLWRSAD
Trigger: GTCTGCCGACCGCCACAGCTGCCAAGGTGAGCTGCAGAGAAGGAATGGCTGCTCTGGGAGGGGTAATGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538579.1
CDS GCA 72 bp CCCTCGGACCAGGGACTGAGGGCTGGCAACACACACTaGTGGAGGAGAAGACTTGGGGCACAGGGACAAGCA +
Preference number: 6 (lower is better)
Translates to: PSDQGLRAGNTH*WRRRLGAQGQA
Trigger: TGCTTGTCCCTGTGCCCCAAGTCTTCTCCTCCAGCAGTGTGTGTTGCCAGCCCTCAGTCCCTGGTCCGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535599.1
CDS CCA 72 bp CGAGGCCCGAGGAGGGTGATGGGGTCTTCGAGGGGCTaGGGTCCATCATGGAAAGTGCTGAAGCTTCCGTCA +
Preference number: 6 (lower is better)
Translates to: RGPRRVMGSSRG*GPSWKVLKLPS
Trigger: TGACGGAAGCTTCAGCACTTTCCATGATGGACCCCAGCCCCTCGAAGACCCCATCACCCTCCTCGGGCCTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613271.4
CDS GCA 72 bp TCCACCTCCCCATTCCAGGTCCTGTCTCCGAAGTACTaGCAGTGGCTGACGGCAGCTGCGTCCTCCAGAGAT +
Preference number: 6 (lower is better)
Translates to: STSPFQVLSPKY*QWLTAAASSRD
Trigger: ATCTCTGGAGGACGCAGCTGCCGTCAGCCACTGGCAGTACTTCGGAGACAGGACCTGGAATGGGGAGGTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535710.1
CDS CAA 90 bp TGGGTGAGGCGGGGCAGCCAGGTAAAGCAGCTGAAGGCGAGCAGGTaGTCATTCACCTGGCAGATGCATAACTCACAGGGGTCACCAGGC +
Preference number: 6 (lower is better)
Translates to: WVRRGSQVKQLKASR*SFTWQMHNSQGSPG
Trigger: GCCTGGTGACCCCTGTGAGTTATGCATCTGCCAGGTGAATGACAACCTGCTCGCCTTCAGCTGCTTTACCTGGCTGCCCCGCCTCACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398808.3
CDS CCA 72 bp TCCCCGCCCTGCAAAAGAAACAGCAACGCTGCAAACTaGCCAAGGCTTGCCCTGAAAGGCAACATGACGCGG +
Preference number: 6 (lower is better)
Translates to: SPPCKRNSNAAN*PRLALKGNMTR
Trigger: CCGCGTCATGTTGCCTTTCAGGGCAAGCCTTGGCCAGTTTGCAGCGTTGCTGTTTCTTTTGCAGGGCGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538438.1
CDS CAA 72 bp CGGGGCAGCCAGGTAAAGCAGCTGAAGGCGAGCAGGTaGTCATTCACCTGGCAGATGCATAACTCACAGGGG +
Preference number: 6 (lower is better)
Translates to: RGSQVKQLKASR*SFTWQMHNSQG
Trigger: CCCCTGTGAGTTATGCATCTGCCAGGTGAATGACAACCTGCTCGCCTTCAGCTGCTTTACCTGGCTGCCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398808.3
CDS CCA 72 bp GTTGTGGCAGGAATGGTGACAGACTCGCCTCTCCAATaGCCTCCGACACTCGTTTACATACAGGAGTGCCGG +
Preference number: 6 (lower is better)
Translates to: VVAGMVTDSPLQ*PPTLVYIQECR
Trigger: CCGGCACTCCTGTATGTAAACGAGTGTCGGAGGCCATTGGAGAGGCGAGTCTGTCACCATTCCTGCCACAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301770.10
CDS CCA 72 bp GCTTGCCCTGAAAGGCAACATGACGCGGCTGGAAGATaGCAGGTCTCCCCTAAAGAGGATCGGCTACTTGAG +
Preference number: 6 (lower is better)
Translates to: ACPERQHDAAGR*QVSPKEDRLLE
Trigger: CTCAAGTAGCCGATCCTCTTTAGGGGAGACCTGCCATCTTCCAGCCGCGTCATGTTGCCTTTCAGGGCAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538438.1
CDS GCA 72 bp GGCCTCCGACACTCGTTTACATACAGGAGTGCCGGTTaGCATGAAGGTGGAAGCCAGTTCGACAGGAACACT +
Preference number: 6 (lower is better)
Translates to: GLRHSFTYRSAG*HEGGSQFDRNT
Trigger: AGTGTTCCTGTCGAACTGGCTTCCACCTTCATGGCAACCGGCACTCCTGTATGTAAACGAGTGTCGGAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301770.10
CDS CCA 72 bp GTAAAGCAGCTGAAGGCGAGCAGGTTGTCATTCACCTaGCAGATGCATAACTCACAGGGGTCACCAGGCGAC +
Preference number: 6 (lower is better)
Translates to: VKQLKASRLSFT*QMHNSQGSPGD
Trigger: GTCGCCTGGTGACCCCTGTGAGTTATGCATCTGCCAGGTGAATGACAACCTGCTCGCCTTCAGCTGCTTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398808.3
CDS GCA 72 bp CAAAAGAAACAGCAACGCTGCAAACTGGCCAAGGCTTaGCCTGAAAGGCAACATGACGCGGCTGGAAGATGG +
Preference number: 6 (lower is better)
Translates to: QKKQQRCKLAKA*PERQHDAAGRW
Trigger: CCATCTTCCAGCCGCGTCATGTTGCCTTTCAGGGCAAGCCTTGGCCAGTTTGCAGCGTTGCTGTTTCTTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538438.1
CDS CCA 72 bp GTTGTGGCAGGAATGGTGACAGACTCGCCTCTCCAATaGCCTCCGACACTCGTTTACATCTACACAGGAGTG +
Preference number: 6 (lower is better)
Translates to: VVAGMVTDSPLQ*PPTLVYIYTGV
Trigger: CACTCCTGTGTAGATGTAAACGAGTGTCGGAGGCCATTGGAGAGGCGAGTCTGTCACCATTCCTGCCACAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335613.10
ENST00000613271.4
CDS GCA 72 bp TCCGACACTCGTTTACATCTACACAGGAGTGCCGGTTaGCATGAAGGTGGAAGCCAGTTCGACAGGAACACT +
Preference number: 6 (lower is better)
Translates to: SDTRLHLHRSAG*HEGGSQFDRNT
Trigger: AGTGTTCCTGTCGAACTGGCTTCCACCTTCATGGCAACCGGCACTCCTGTGTAGATGTAAACGAGTGTCGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335613.10
ENST00000613271.4
CDS CCA 72 bp CGTCACCACCATCCAAATCCTTTCTCAGCTTTTCCCTaGAACCCTGGCTCACCAGGAACCTACAGAGTACCA +
Preference number: 6 (lower is better)
Translates to: RHHHPNPFSAFP*NPGSPGTYRVP
Trigger: TGGTACTCTGTAGGTTCCTGGTGAGCCAGGGTTCCAGGGAAAAGCTGAGAAAGGATTTGGATGGTGGTGACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538438.1
CDS TCA 72 bp ACTGAGAGCAGGATAAACTCGGTCCAACCCTTTTTGTaGAAGTGGAACTTGACAGCACCGGAGGGAGACTGC +
Preference number: 6 (lower is better)
Translates to: TESRINSVQPFL*KWNLTAPEGDC
Trigger: GCAGTCTCCCTCCGGTGCTGTCAAGTTCCACTTTCACAAAAAGGGTTGGACCGAGTTTATCCTGCTCTCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398808.3
CDS TCA 72 bp GCCAACTGCCAAGCACCATCGTCCTCACACATCTACTaGGAGCAGGATAAACTCGGTCCAACCCTTTTTGTG +
Preference number: 6 (lower is better)
Translates to: ANCQAPSSSHIY*EQDKLGPTLFV
Trigger: CACAAAAAGGGTTGGACCGAGTTTATCCTGCTCTCAGTAGATGTGTGAGGACGATGGTGCTTGGCAGTTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398808.3
CDS CCA 72 bp CCATCCAAATCCTTTCTCAGCTTTTCCCTGGAACCCTaGCTCACCAGGAACCTACAGAGTACCATAAAACCC +
Preference number: 6 (lower is better)
Translates to: PSKSFLSFSLEP*LTRNLQSTIKP
Trigger: GGGTTTTATGGTACTCTGTAGGTTCCTGGTGAGCCAGGGTTCCAGGGAAAAGCTGAGAAAGGATTTGGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538438.1