RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for VWC2L (Homo sapiens)

Ensembl gene IDs: ENSG00000174453

Ensembl transcript IDs: ENST00000312504.10, ENST00000427124.1, ENST00000477752.1

Found 368 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGGCCCGTCTATGTGCCCACCCCTCTTTCCTTAGTCTACAGGGCATaGTTCACCCTAGGGGAGCAATTGACTGGATGCTCTTGTGTTTCC +
Preference number: 1 (lower is better)
Translates to: RPVYVPTPLSLVYRA*FTLGEQLTGCSCVS
Trigger: GGAAACACAAGAGCATCCAGTCAATTGCTCCCCTAGGGTGAATCATGCCCTGTAGACTAAGGAAAGAGGGGTGGGCACATAGACGGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
3UTR CCA 90 bp ATGAAAGGCACCAACCTTGCTGCAAATTGGTGTTCTAAGGGAAGGTaGCTTGATGCTCTTCCTCGGGATGGTGCCGGCATGGCTATTTGT +
Preference number: 1 (lower is better)
Translates to: MKGTNLAANWCSKGR*LDALPRDGAGMAIC
Trigger: ACAAATAGCCATGCCGGCACCATCCCGAGGAAGAGCATCAAGCCACCTTCCCTTAGAACACCAATTTGCAGCAAGGTTGGTGCCTTTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
3UTR TCA 90 bp GGGTGGGCCTATAGCATTAGAAGCCTCACTCTCTATGGAGAAGACTaGCCCCTTGGAAATGCTGACTGTGTATGTCCCATAGGGATCAGA +
Preference number: 1 (lower is better)
Translates to: GWAYSIRSLTLYGED*PLGNADCVCPIGIR
Trigger: TCTGATCCCTATGGGACATACACAGTCAGCATTTCCAAGGGGTCAGTCTTCTCCATAGAGAGTGAGGCTTCTAATGCTATAGGCCCACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
3UTR GCA 90 bp TCACAAAAGCCACAGGTGCTGCTAGAGCTTGCCTACTGTGTCCCCTaGCAGAAACCACTCTATACTGATTATTCTAGACCACTGGTTCTC +
Preference number: 1 (lower is better)
Translates to: SQKPQVLLELAYCVP*QKPLYTDYSRPLVL
Trigger: GAGAACCAGTGGTCTAGAATAATCAGTATAGAGTGGTTTCTGGCAGGGGACACAGTAGGCAAGCTCTAGCAGCACCTGTGGCTTTTGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
3UTR CCA 90 bp ATGTATCCATGGTGGCAAATGAAAGGCACCAACCTTGCTGCAAATTaGTGTTCTAAGGGAAGGTGGCTTGATGCTCTTCCTCGGGATGGT +
Preference number: 1 (lower is better)
Translates to: MYPWWQMKGTNLAAN*CSKGRWLDALPRDG
Trigger: ACCATCCCGAGGAAGAGCATCAAGCCACCTTCCCTTAGAACACCAATTTGCAGCAAGGTTGGTGCCTTTCATTTGCCACCATGGATACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
3UTR GCA 90 bp AATGATCTGGCCCCAAATGTCAATCCTACTAAGATTGAGACACCTTaGTCTAGAATATGGCTCTCCACAGGAGCTATGGCAAAGCCCAGG +
Preference number: 1 (lower is better)
Translates to: NDLAPNVNPTKIETP*SRIWLSTGAMAKPR
Trigger: CCTGGGCTTTGCCATAGCTCCTGTGGAGAGCCATATTCTAGAGCAAGGTGTCTCAATCTTAGTAGGATTGACATTTGGGGCCAGATCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
3UTR GCA 90 bp GGATGGTGCCGGCATGGCTATTTGTATCATAACGCAAGCACAGTGTaGATAAGAATGTCAGGTCTGACTCGTCAGCACGTTAATTTTGGA +
Preference number: 1 (lower is better)
Translates to: GWCRHGYLYHNASTV*IRMSGLTRQHVNFG
Trigger: TCCAAAATTAACGTGCTGACGAGTCAGACCTGACATTCTTATGCACACTGTGCTTGCGTTATGATACAAATAGCCATGCCGGCACCATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
3UTR GCA 90 bp CCTCTCTCTAGCTGGTTATCAGAGGCCACAGAACAGCCTGCTTTCTaGAAACTCTCTGAAGAGAGATCCTTAATGGATGTCCCATTCAAT +
Preference number: 1 (lower is better)
Translates to: PLSSWLSEATEQPAF*KLSEERSLMDVPFN
Trigger: ATTGAATGGGACATCCATTAAGGATCTCTCTTCAGAGAGTTTGCAGAAAGCAGGCTGTTCTGTGGCCTCTGATAACCAGCTAGAGAGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
3UTR CCA 90 bp GGTGGAAAGGGTGTCCTGAATCTGTGTTTCAGACATAGGGCTGAGTaGTTGTTACTACAACATGGCAAACACAGTCCCGAACCACAAAAA +
Preference number: 1 (lower is better)
Translates to: GGKGVLNLCFRHRAE*LLLQHGKHSPEPQK
Trigger: TTTTTGTGGTTCGGGACTGTGTTTGCCATGTTGTAGTAACAACCACTCAGCCCTATGTCTGAAACACAGATTCAGGACACCCTTTCCACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
3UTR CCA 90 bp AGATTGAGACACCTTGCTCTAGAATATGGCTCTCCACAGGAGCTATaGCAAAGCCCAGGTTGGGGGAGCAGAAAAAGAAAGAACATTGAT +
Preference number: 1 (lower is better)
Translates to: RLRHLALEYGSPQEL*QSPGWGSRKRKNID
Trigger: ATCAATGTTCTTTCTTTTTCTGCTCCCCCAACCTGGGCTTTGCCATAGCTCCTGTGGAGAGCCATATTCTAGAGCAAGGTGTCTCAATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
3UTR TCA 90 bp TTAAAGCCGAGAACCAAAGGCGGAGGAGAAATAGGAGTACAGAGATaGCAGTGTGGCTGCAAACAAAGACTTCACAAGAAACAAACAACA +
Preference number: 1 (lower is better)
Translates to: LKPRTKGGGEIGVQR*QCGCKQRLHKKQTT
Trigger: TGTTGTTTGTTTCTTGTGAAGTCTTTGTTTGCAGCCACACTGTCATCTCTGTACTCCTATTTCTCCTCCGCCTTTGGTTCTCGGCTTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
3UTR CCA 90 bp CTGAACTCAAAAGCCAGAGATGTTCATAAGGATTTGGATTCACAGTaGGTTTTCTCACCCTGGTTCTGGTATTTATATTGCCTGATGACA +
Preference number: 1 (lower is better)
Translates to: LNSKARDVHKDLDSQ*VFSPWFWYLYCLMT
Trigger: TGTCATCAGGCAATATAAATACCAGAACCAGGGTGAGAAAACCCACTGTGAATCCAAATCCTTATGAACATCTCTGGCTTTTGAGTTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
3UTR TCA 90 bp AGATCCTTAATGGATGTCCCATTCAATTCTAGTAAATTCTTGCTGTaGCTCTCGCTGTGCCAATGCTTTGATGCAAAATTTCTGCACTTC +
Preference number: 1 (lower is better)
Translates to: RSLMDVPFNSSKFLL*LSLCQCFDAKFLHF
Trigger: GAAGTGCAGAAATTTTGCATCAAAGCATTGGCACAGCGAGAGTCACAGCAAGAATTTACTAGAATTGAATGGGACATCCATTAAGGATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
3UTR CCA 90 bp AGAGATGTTCATAAGGATTTGGATTCACAGTGGGTTTTCTCACCCTaGTTCTGGTATTTATATTGCCTGATGACAGTGAGTTTAGAGTGT +
Preference number: 1 (lower is better)
Translates to: RDVHKDLDSQWVFSP*FWYLYCLMTVSLEC
Trigger: ACACTCTAAACTCACTGTCATCAGGCAATATAAATACCAGAACCAGGGTGAGAAAACCCACTGTGAATCCAAATCCTTATGAACATCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
3UTR-3UTR GCA 90 bp CTTGATGCTCTTCCTCGGGATGGTGCCGGCATGGCTATTTGTATCATAACGCAAGGTGCTGCTAGAGCTTaGCTACTGTGTCCCCTGCCA +
Preference number: 2 (lower is better)
Translates to: LDALPRDGAGMAICIITQGAARA*LLCPLP
Trigger: TGGCAGGGGACACAGTAGGCAAGCTCTAGCAGCACC...TTGCGTTATGATACAAATAGCCATGCCGGCACCATCCCGAGGAAGAGCATCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
3UTR CAA 90 bp GAACTCATCATTGGGTGGAAGTTTGTCCTACACAGTCTGCTTGCCTaGGCATTCACGTTTCGAACACTGAGCAGGCTTCCACCAGTCCCC +
Preference number: 2 (lower is better)
Translates to: ELIIGWKFVLHSLLA*AFTFRTLSRLPPVP
Trigger: GGGGACTGGTGGAAGCCTGCTCAGTGTTCGAAACGTGAATGCCAAGGCAAGCAGACTGTGTAGGACAAACTTCCACCCAATGATGAGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427124.1
3UTR-3UTR CCA 90 bp TGGTGTTCTAAGGGAAGGTGGCTTGATGCTCTTCCTCGGGATGGTGCCGGCATGAATCAGCACTTGAGGTaGAAAGGGTGTCCTGAATCT +
Preference number: 2 (lower is better)
Translates to: WCSKGRWLDALPRDGAGMNQHLR*KGCPES
Trigger: AGATTCAGGACACCCTTTCCACCTCAAGTGCTGATT...CATGCCGGCACCATCCCGAGGAAGAGCATCAAGCCACCTTCCCTTAGAACACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
3UTR CAA 90 bp AAGGCACCAACCTTGCTGCAAATTGGTGTTCTAAGGGAAGGTGGCTaGATGCTCTTCCTCGGGATGGTGCCGGCATGGCTATTTGTATCA +
Preference number: 2 (lower is better)
Translates to: KAPTLLQIGVLREGG*MLFLGMVPAWLFVS
Trigger: TGATACAAATAGCCATGCCGGCACCATCCCGAGGAAGAGCATCAAGCCACCTTCCCTTAGAACACCAATTTGCAGCAAGGTTGGTGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
3UTR-3UTR TCA 90 bp TGGTGTTCTAAGGGAAGGTGGCTTGATGCTCTTCCTCGGGATGGTGCCGGCATGGCCAGTGTGTACTACTaGCTTTTAGCCAAATCTGAA +
Preference number: 2 (lower is better)
Translates to: WCSKGRWLDALPRDGAGMASVYY*LLAKSE
Trigger: TTCAGATTTGGCTAAAAGTCAGTAGTACACACTGGC...CATGCCGGCACCATCCCGAGGAAGAGCATCAAGCCACCTTCCCTTAGAACACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
3UTR-3UTR TCA 90 bp CTGGATGCTCTTGTGTTTCCCAGCTCGGGAAAGATATTTCCCCTGACATTCCTTTCACGTTTCGAACACTaGGCAGGCTTCCACCAGTCC +
Preference number: 2 (lower is better)
Translates to: LDALVFPSSGKIFPLTFLSRFEH*AGFHQS
Trigger: GGACTGGTGGAAGCCTGCTCAGTGTTCGAAACGTGA...AAGGAATGTCAGGGGAAATATCTTTCCCGAGCTGGGAAACACAAGAGCATCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427124.1
3UTR-3UTR GCA 90 bp CCACTGGTTCTCAACGAGGTGAAATTAGGCCCCTCACTCCCACTCCTTAGGGACCCGAACCACAAAAACTaGCAGTGTGTACTACTGACT +
Preference number: 2 (lower is better)
Translates to: PLVLNEVKLGPSLPLLRDPNHKN*QCVLLT
Trigger: AGTCAGTAGTACACACTGGCAGTTTTTGTGGTTCGG...GTCCCTAAGGAGTGGGAGTGAGGGGCCTAATTTCACCTCGTTGAGAACCAGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
3UTR-3UTR GCA 90 bp GCTGCAAATTGGTGTTCTAAGGGAAGGTGGCTTGATGCTCTTCCTCGGGATGGTCCTACACAGTCTGCTTaGCTTGGCATTCACGTTTCG +
Preference number: 2 (lower is better)
Translates to: AANWCSKGRWLDALPRDGPTQSA*LGIHVS
Trigger: CGAAACGTGAATGCCAAGGCAAGCAGACTGTGTAGG...ACCATCCCGAGGAAGAGCATCAAGCCACCTTCCCTTAGAACACCAATTTGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427124.1
3UTR-3UTR CCA 90 bp GCTGCAAATTGGTGTTCTAAGGGAAGGTGGCTTGATGCTCTTCCTCGGGATGGTGCACTTGAATCGAGGTaGCATCAGATACCCTGTGTG +
Preference number: 2 (lower is better)
Translates to: AANWCSKGRWLDALPRDGALESR*HQIPCV
Trigger: CACACAGGGTATCTGATGCCACCTCGATTCAAGTGC...ACCATCCCGAGGAAGAGCATCAAGCCACCTTCCCTTAGAACACCAATTTGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
3UTR-3UTR CCA 90 bp GCAAATTGGTGTTCTAAGGGAAGGTGGCTTGATGCTCTTCCTCGGGATGGTGCCGATTTGGATTCACAGTaGGTTTTCTCACCCTGGTTC +
Preference number: 2 (lower is better)
Translates to: ANWCSKGRWLDALPRDGADLDSQ*VFSPWF
Trigger: GAACCAGGGTGAGAAAACCCACTGTGAATCCAAATC...GGCACCATCCCGAGGAAGAGCATCAAGCCACCTTCCCTTAGAACACCAATTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
3UTR-3UTR GCA 90 bp GCTGCAAATTGGTGTTCTAAGGGAAGGTGGCTTGATGCTCTTCCTCGGGATGGTCCGAACCACAAAAACTaGCAGTGTGTACTACTGACT +
Preference number: 2 (lower is better)
Translates to: AANWCSKGRWLDALPRDGPNHKN*QCVLLT
Trigger: AGTCAGTAGTACACACTGGCAGTTTTTGTGGTTCGG...ACCATCCCGAGGAAGAGCATCAAGCCACCTTCCCTTAGAACACCAATTTGCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
3UTR-3UTR CCA 90 bp CCACTGGTTCTCAACGAGGTGAAATTAGGCCCCTCACTCCCACTCCTTAGGGACTTCTCACCCTGGTTCTaGTATTTATATTGCCTGATG +
Preference number: 2 (lower is better)
Translates to: PLVLNEVKLGPSLPLLRDFSPWF*YLYCLM
Trigger: CATCAGGCAATATAAATACCAGAACCAGGGTGAGAA...GTCCCTAAGGAGTGGGAGTGAGGGGCCTAATTTCACCTCGTTGAGAACCAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
3UTR-3UTR TCA 90 bp AAATCCCTCTCTCTAGCTGGTTATCAGAGGCCACAGAACAGCCTGCTTTCTGCAAAACATGTGCAGTGTTaGAGCCATAGCATCCTTTCC +
Preference number: 2 (lower is better)
Translates to: KSLSLAGYQRPQNSLLSAKHVQC*SHSILS
Trigger: GGAAAGGATGCTATGGCTTCAACACTGCACATGTTT...TGCAGAAAGCAGGCTGTTCTGTGGCCTCTGATAACCAGCTAGAGAGAGGGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
3UTR-3UTR TCA 90 bp AAATCCCTCTCTCTAGCTGGTTATCAGAGGCCACAGAACAGCCTGCTTTCTGCAAAGAGTGTGGATTTTTaGAGTTGGCAACAGGCAACC +
Preference number: 2 (lower is better)
Translates to: KSLSLAGYQRPQNSLLSAKSVDF*SWQQAT
Trigger: GGTTGCCTGTTGCCAACTTCAAAAATCCACACTCTT...TGCAGAAAGCAGGCTGTTCTGTGGCCTCTGATAACCAGCTAGAGAGAGGGATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
3UTR-3UTR CCA 90 bp GATGGTGCTAAACATCCTAAAAGCACACAGGACAGCCCCCACCAACGAATAATGAGGGGAGCAATTGACTaGATGCTCTTGTGTTTCCCA +
Preference number: 2 (lower is better)
Translates to: DGAKHPKSTQDSPHQRIMRGAID*MLLCFP
Trigger: TGGGAAACACAAGAGCATCCAGTCAATTGCTCCCCT...CATTATTCGTTGGTGGGGGCTGTCCTGTGTGCTTTTAGGATGTTTAGCACCATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
3UTR-3UTR CCA 90 bp GCACCAACCTTGCTGCAAATTGGTGTTCTAAGGGAAGGTGGCTTGATGCTCTTCGTTGTTACTACAACATaGCAAACACAGTCCCGAACC +
Preference number: 2 (lower is better)
Translates to: APTLLQIGVLREGGLMLFVVTTT*QTQSRT
Trigger: GGTTCGGGACTGTGTTTGCCATGTTGTAGTAACAAC...GAAGAGCATCAAGCCACCTTCCCTTAGAACACCAATTTGCAGCAAGGTTGGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
3UTR CAA 90 bp GGAAAGGGTGTCCTGAATCTGTGTTTCAGACATAGGGCTGAGTGGTaGTTACTACAACATGGCAAACACAGTCCCGAACCACAAAAACTG +
Preference number: 2 (lower is better)
Translates to: GKGVLNLCFRHRAEW*LLQHGKHSPEPQKL
Trigger: CAGTTTTTGTGGTTCGGGACTGTGTTTGCCATGTTGTAGTAACAACCACTCAGCCCTATGTCTGAAACACAGATTCAGGACACCCTTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
3UTR-3UTR CCA 90 bp GCTGCAAATTGGTGTTCTAAGGGAAGGTGGCTTGATGCTCTTCCTCGGGATGGTACATTAGGCAATGTCTaGAGAAATTTGGTTGTCACC +
Preference number: 2 (lower is better)
Translates to: AANWCSKGRWLDALPRDGTLGNV*RNLVVT
Trigger: GGTGACAACCAAATTTCTCCAGACATTGCCTAATGT...ACCATCCCGAGGAAGAGCATCAAGCCACCTTCCCTTAGAACACCAATTTGCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
3UTR-3UTR TCA 90 bp GTCTATATGATGTATCCATGGTGGCAAATGAAAGGCACCAACCTTGCTGCAAATCTCTATGGAGAAGACTaGCCCCTTGGAAATGCTGAC +
Preference number: 2 (lower is better)
Translates to: VYMMYPWWQMKGTNLAANLYGED*PLGNAD
Trigger: GTCAGCATTTCCAAGGGGTCAGTCTTCTCCATAGAG...ATTTGCAGCAAGGTTGGTGCCTTTCATTTGCCACCATGGATACATCATATAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
3UTR-3UTR GCA 90 bp AACATGGCAAACACAGTCCCGAACCACAAAAACTGCCAGTGTGTACTACTGACTCAGGGAAGGAGCCTGTaGAAGGCTATTTCTTTCTTT +
Preference number: 2 (lower is better)
Translates to: NMANTVPNHKNCQCVLLTQGRSL*KAISFF
Trigger: AAAGAAAGAAATAGCCTTGCACAGGCTCCTTCCCTG...AGTCAGTAGTACACACTGGCAGTTTTTGTGGTTCGGGACTGTGTTTGCCATGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
3UTR-3UTR CCA 90 bp ATGAAAGGCACCAACCTTGCTGCAAATTGGTGTTCTAAGGGAAGGTGGCTTGATAGACATAGGGCTGAGTaGTTGTTACTACAACATGGC +
Preference number: 2 (lower is better)
Translates to: MKGTNLAANWCSKGRWLDRHRAE*LLLQHG
Trigger: GCCATGTTGTAGTAACAACCACTCAGCCCTATGTCT...ATCAAGCCACCTTCCCTTAGAACACCAATTTGCAGCAAGGTTGGTGCCTTTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
3UTR-3UTR CCA 90 bp AAATCCCTCTCTCTAGCTGGTTATCAGAGGCCACAGAACAGCCTGCTTTCTGCATATATGATGTATCCATaGTGGCAAATGAAAGGCACC +
Preference number: 2 (lower is better)
Translates to: KSLSLAGYQRPQNSLLSAYMMYP*WQMKGT
Trigger: GGTGCCTTTCATTTGCCACCATGGATACATCATATA...TGCAGAAAGCAGGCTGTTCTGTGGCCTCTGATAACCAGCTAGAGAGAGGGATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
3UTR-3UTR CCA 90 bp GATGGTGCTAAACATCCTAAAAGCACACAGGACAGCCCCCACCAACGAATAATGGAACTCATCATTGGGTaGAAGTTTGTCCTACACAGT +
Preference number: 2 (lower is better)
Translates to: DGAKHPKSTQDSPHQRIMELIIG*KFVLHS
Trigger: ACTGTGTAGGACAAACTTCCACCCAATGATGAGTTC...CATTATTCGTTGGTGGGGGCTGTCCTGTGTGCTTTTAGGATGTTTAGCACCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427124.1
3UTR-3UTR TCA 90 bp CTTGATGCTCTTCCTCGGGATGGTGCCGGCATGGCTATTTGTATCATAACGCAATCGAGGTTTTCCATATaGAATGTGTGGTTTGTAAGA +
Preference number: 2 (lower is better)
Translates to: LDALPRDGAGMAICIITQSRFSI*NVWFVR
Trigger: TCTTACAAACCACACATTTCATATGGAAAACCTCGA...TTGCGTTATGATACAAATAGCCATGCCGGCACCATCCCGAGGAAGAGCATCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
3UTR-3UTR GCA 90 bp GAGATGTTCATAAGGATTTGGATTCACAGTGGGTTTTCTCACCCTGGTTCTGGTCAGGGAAGGAGCCTGTaGAAGGCTATTTCTTTCTTT +
Preference number: 2 (lower is better)
Translates to: EMFIRIWIHSGFSHPGSGQGRSL*KAISFF
Trigger: AAAGAAAGAAATAGCCTTGCACAGGCTCCTTCCCTG...ACCAGAACCAGGGTGAGAAAACCCACTGTGAATCCAAATCCTTATGAACATCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
3UTR-3UTR GCA 90 bp CTTGATGCTCTTCCTCGGGATGGTGCCGGCATGGCTATTTGTATCATAACGCAAAATGGAATTGTATTGTaGAAGACTCACTCTACCCTA +
Preference number: 2 (lower is better)
Translates to: LDALPRDGAGMAICIITQNGIVL*KTHSTL
Trigger: TAGGGTAGAGTGAGTCTTGCACAATACAATTCCATT...TTGCGTTATGATACAAATAGCCATGCCGGCACCATCCCGAGGAAGAGCATCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
3UTR-3UTR CCA 90 bp CCTACTGTGTCCCCTGCCAGAAACCACTCTATACTGATTATTCTAGACCACTGGACATTAGGCAATGTCTaGAGAAATTTGGTTGTCACC +
Preference number: 2 (lower is better)
Translates to: PTVSPARNHSILIILDHWTLGNV*RNLVVT
Trigger: GGTGACAACCAAATTTCTCCAGACATTGCCTAATGT...CCAGTGGTCTAGAATAATCAGTATAGAGTGGTTTCTGGCAGGGGACACAGTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
3UTR-3UTR TCA 90 bp AACATGTGCAGTGTTGAAGCCATAGCATCCTTTCCTAAGAACTCATCATTGGGTAAACATGTGCAGTGTTaGAGCCATAGCATCCTTTCC +
Preference number: 2 (lower is better)
Translates to: NMCSVEAIASFPKNSSLGKHVQC*SHSILS
Trigger: GGAAAGGATGCTATGGCTTCAACACTGCACATGTTT...ACCCAATGATGAGTTCTTAGGAAAGGATGCTATGGCTTCAACACTGCACATGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
3UTR-3UTR GCA 90 bp ATGTCAGGTCTGACTCGTCAGCACGTTAATTTTGGAAATGACAACTCTTTCTTGTTGTCCTACACAGTCTaGTTGCCTTGGCATTCACGT +
Preference number: 2 (lower is better)
Translates to: MSGLTRQHVNFGNDNSFLLSYTV*LPWHSR
Trigger: ACGTGAATGCCAAGGCAAGCAGACTGTGTAGGACAA...CAAGAAAGAGTTGTCATTTCCAAAATTAACGTGCTGACGAGTCAGACCTGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427124.1
3UTR-3UTR CCA 90 bp ATAAGAATGTCAGGTCTGACTCGTCAGCACGTTAATTTTGGAAATGACAACTCTGCACTTGAATCGAGGTaGCATCAGATACCCTGTGTG +
Preference number: 2 (lower is better)
Translates to: IRMSGLTRQHVNFGNDNSALESR*HQIPCV
Trigger: CACACAGGGTATCTGATGCCACCTCGATTCAAGTGC...AGAGTTGTCATTTCCAAAATTAACGTGCTGACGAGTCAGACCTGACATTCTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
3UTR-3UTR TCA 90 bp GCTGAGTGGTTGTTACTACAACATGGCAAACACAGTCCCGAACCACAAAAACTGTCGAGGTTTTCCATATaGAATGTGTGGTTTGTAAGA +
Preference number: 2 (lower is better)
Translates to: AEWLLLQHGKHSPEPQKLSRFSI*NVWFVR
Trigger: TCTTACAAACCACACATTTCATATGGAAAACCTCGA...CAGTTTTTGTGGTTCGGGACTGTGTTTGCCATGTTGTAGTAACAACCACTCAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
3UTR-3UTR GCA 90 bp AACATGGCAAACACAGTCCCGAACCACAAAAACTGCCAGTGTGTACTACTGACTTTTGTGTTAAACATGTaGAGTGTTGAAGCCATAGCA +
Preference number: 2 (lower is better)
Translates to: NMANTVPNHKNCQCVLLTFVLNM*SVEAIA
Trigger: TGCTATGGCTTCAACACTGCACATGTTTAACACAAA...AGTCAGTAGTACACACTGGCAGTTTTTGTGGTTCGGGACTGTGTTTGCCATGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
3UTR-3UTR GCA 90 bp TCGGGGCAAAGAAAGCTCTATAATACATCTCTGTCTAGACATAAGCTAAAGTGTGAGCAATTGACTGGATaGTCTTGTGTTTCCCAGCTC +
Preference number: 2 (lower is better)
Translates to: SGQRKLYNTSLSRHKLKCEQLTG*SCVSQL
Trigger: GAGCTGGGAAACACAAGAGCATCCAGTCAATTGCTC...ACACTTTAGCTTATGTCTAGACAGAGATGTATTATAGAGCTTTCTTTGCCCCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
3UTR-3UTR CCA 90 bp TTCAGAATTGTTAATTTTGCACTTGAATCGAGGTGGCATCAGATACCCTGTGTGGTTGTTACTACAACATaGCAAACACAGTCCCGAACC +
Preference number: 2 (lower is better)
Translates to: FRIVNFALESRWHQIPCVVVTTT*QTQSRT
Trigger: GGTTCGGGACTGTGTTTGCCATGTTGTAGTAACAAC...CACACAGGGTATCTGATGCCACCTCGATTCAAGTGCAAAATTAACAATTCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
3UTR-3UTR CCA 90 bp TCGGGGCAAAGAAAGCTCTATAATACATCTCTGTCTAGACATAAGCTAAAGTGTCCTTGCTCTAGAATATaGCTCTCCACAGGAGCTATG +
Preference number: 2 (lower is better)
Translates to: SGQRKLYNTSLSRHKLKCPCSRI*LSTGAM
Trigger: CATAGCTCCTGTGGAGAGCCATATTCTAGAGCAAGG...ACACTTTAGCTTATGTCTAGACAGAGATGTATTATAGAGCTTTCTTTGCCCCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
3UTR-3UTR CCA 90 bp ATTGTTAATTTTGCACTTGAATCGAGGTGGCATCAGATACCCTGTGTGTTTTGTACAGTCTGCTTGCCTTaGCATTCACGTTTCGAACAC +
Preference number: 2 (lower is better)
Translates to: IVNFALESRWHQIPCVFCTVCLP*HSRFEH
Trigger: GTGTTCGAAACGTGAATGCCAAGGCAAGCAGACTGT...ACAAAACACACAGGGTATCTGATGCCACCTCGATTCAAGTGCAAAATTAACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427124.1
3UTR-3UTR TCA 90 bp GTCTATATGATGTATCCATGGTGGCAAATGAAAGGCACCAACCTTGCTGCAAATACTTTTAGCCAAATCTaGACTCAAAAGCCAGAGATG +
Preference number: 2 (lower is better)
Translates to: VYMMYPWWQMKGTNLAANTFSQI*TQKPEM
Trigger: CATCTCTGGCTTTTGAGTTCAGATTTGGCTAAAAGT...ATTTGCAGCAAGGTTGGTGCCTTTCATTTGCCACCATGGATACATCATATAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
3UTR-3UTR GCA 90 bp TCGGGGCAAAGAAAGCTCTATAATACATCTCTGTCTAGACATAAGCTAAAGTGTAACGCAAGCACAGTGTaGATAAGAATGTCAGGTCTG +
Preference number: 2 (lower is better)
Translates to: SGQRKLYNTSLSRHKLKCNASTV*IRMSGL
Trigger: CAGACCTGACATTCTTATGCACACTGTGCTTGCGTT...ACACTTTAGCTTATGTCTAGACAGAGATGTATTATAGAGCTTTCTTTGCCCCGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
3UTR-3UTR GCA 90 bp AGAAAGCTCTATAATACATCTCTGTCTAGACATAAGCTAAAGTGTGGAATTCCTTCTTCCTCGGGATGGTaGCGGCATGGCTATTTGTAT +
Preference number: 2 (lower is better)
Translates to: RKLYNTSLSRHKLKCGIPSSSGW*RHGYLY
Trigger: ATACAAATAGCCATGCCGGCACCATCCCGAGGAAGA...AGGAATTCCACACTTTAGCTTATGTCTAGACAGAGATGTATTATAGAGCTTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
3UTR-3UTR CCA 90 bp TTGCCTGATGACAGTGAGTTTAGAGTGTGTTTAGCTACAAACCAAACTCAAATTAGGGGAGCAATTGACTaGATGCTCTTGTGTTTCCCA +
Preference number: 2 (lower is better)
Translates to: LPDDSEFRVCLATNQTQIRGAID*MLLCFP
Trigger: TGGGAAACACAAGAGCATCCAGTCAATTGCTCCCCT...AATTTGAGTTTGGTTTGTAGCTAAACACACTCTAAACTCACTGTCATCAGGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
3UTR-3UTR CCA 90 bp GATTCACAGTGGGTTTTCTCACCCTGGTTCTGGTATTTATATTGCCTGATGACATTCTCACCCTGGTTCTaGTATTTATATTGCCTGATG +
Preference number: 2 (lower is better)
Translates to: DSQWVFSPWFWYLYCLMTFSPWF*YLYCLM
Trigger: CATCAGGCAATATAAATACCAGAACCAGGGTGAGAA...TGTCATCAGGCAATATAAATACCAGAACCAGGGTGAGAAAACCCACTGTGAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
3UTR-3UTR CCA 90 bp AGCCCCCACCAACGAATAATGATCTGGCCCCAAATGTCAATCCTACTAAGATTGATGTTCATAAGGATTTaGATTCACAGTGGGTTTTCT +
Preference number: 2 (lower is better)
Translates to: SPHQRIMIWPQMSILLRLMFIRI*IHSGFS
Trigger: AGAAAACCCACTGTGAATCCAAATCCTTATGAACAT...CAATCTTAGTAGGATTGACATTTGGGGCCAGATCATTATTCGTTGGTGGGGGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
3UTR-3UTR CCA 90 bp ATAAGAATGTCAGGTCTGACTCGTCAGCACGTTAATTTTGGAAATGACAACTCTAGACATAGGGCTGAGTaGTTGTTACTACAACATGGC +
Preference number: 2 (lower is better)
Translates to: IRMSGLTRQHVNFGNDNSRHRAE*LLLQHG
Trigger: GCCATGTTGTAGTAACAACCACTCAGCCCTATGTCT...AGAGTTGTCATTTCCAAAATTAACGTGCTGACGAGTCAGACCTGACATTCTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
3UTR-3UTR CCA 90 bp TCGGGGCAAAGAAAGCTCTATAATACATCTCTGTCTAGACATAAGCTAAAGTGTAATCAGCACTTGAGGTaGAAAGGGTGTCCTGAATCT +
Preference number: 2 (lower is better)
Translates to: SGQRKLYNTSLSRHKLKCNQHLR*KGCPES
Trigger: AGATTCAGGACACCCTTTCCACCTCAAGTGCTGATT...ACACTTTAGCTTATGTCTAGACAGAGATGTATTATAGAGCTTTCTTTGCCCCGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
3UTR CAA 90 bp TTTGGATTCACAGTGGGTTTTCTCACCCTGGTTCTGGTATTTATATaGCCTGATGACAGTGAGTTTAGAGTGTGTTTAGCTACAAACCAA +
Preference number: 2 (lower is better)
Translates to: FGFTVGFLTLVLVFI*PDDSEFRVCLATNQ
Trigger: TTGGTTTGTAGCTAAACACACTCTAAACTCACTGTCATCAGGCAATATAAATACCAGAACCAGGGTGAGAAAACCCACTGTGAATCCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
3UTR-3UTR GCA 90 bp ATGTCAGGTCTGACTCGTCAGCACGTTAATTTTGGAAATGACAACTCTTTCTTGTTTGTGTTAAACATGTaGAGTGTTGAAGCCATAGCA +
Preference number: 2 (lower is better)
Translates to: MSGLTRQHVNFGNDNSFLFVLNM*SVEAIA
Trigger: TGCTATGGCTTCAACACTGCACATGTTTAACACAAA...CAAGAAAGAGTTGTCATTTCCAAAATTAACGTGCTGACGAGTCAGACCTGACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
3UTR CAA 90 bp ACATCTCTGTCTAGACATAAGCTAAAGTGTGGAATTCCTTTACTTTaGAGTGCAGACATAAATCATGCAGCATTGCTCATGAATGATTCA +
Preference number: 2 (lower is better)
Translates to: TSLSRHKLKCGIPLL*SADINHAALLMNDS
Trigger: TGAATCATTCATGAGCAATGCTGCATGATTTATGTCTGCACTCAAAAGTAAAGGAATTCCACACTTTAGCTTATGTCTAGACAGAGATGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
3UTR-3UTR GCA 90 bp AGAAAGCTCTATAATACATCTCTGTCTAGACATAAGCTAAAGTGTGGAATTCCTAATGGAATTGTATTGTaGAAGACTCACTCTACCCTA +
Preference number: 2 (lower is better)
Translates to: RKLYNTSLSRHKLKCGIPNGIVL*KTHSTL
Trigger: TAGGGTAGAGTGAGTCTTGCACAATACAATTCCATT...AGGAATTCCACACTTTAGCTTATGTCTAGACAGAGATGTATTATAGAGCTTTCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
3UTR CCA 72 bp ACCAACCTTGCTGCAAATTGGTGTTCTAAGGGAAGGTaGCTTGATGCTCTTCCTCGGGATGGTGCCGGCATG +
Preference number: 3 (lower is better)
Translates to: TNLAANWCSKGR*LDALPRDGAGM
Trigger: CATGCCGGCACCATCCCGAGGAAGAGCATCAAGCCACCTTCCCTTAGAACACCAATTTGCAGCAAGGTTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
3UTR GCA 72 bp CAGAAGCTCACAAAAGCCACAGGTGCTGCTAGAGCTTaGCTACTGTGTCCCCTGCCAGAAACCACTCTATAC +
Preference number: 3 (lower is better)
Translates to: QKLTKATGAARA*LLCPLPETTLY
Trigger: GTATAGAGTGGTTTCTGGCAGGGGACACAGTAGGCAAGCTCTAGCAGCACCTGTGGCTTTTGTGAGCTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
3UTR TCA 72 bp TATGTGCCCACCCCTCTTTCCTTAGTCTACAGGGCATaGTTCACCCTAGGGGAGCAATTGACTGGATGCTCT +
Preference number: 3 (lower is better)
Translates to: YVPTPLSLVYRA*FTLGEQLTGCS
Trigger: AGAGCATCCAGTCAATTGCTCCCCTAGGGTGAATCATGCCCTGTAGACTAAGGAAAGAGGGGTGGGCACATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
3UTR CCA 72 bp CACCTTGCTCTAGAATATGGCTCTCCACAGGAGCTATaGCAAAGCCCAGGTTGGGGGAGCAGAAAAAGAAAG +
Preference number: 3 (lower is better)
Translates to: HLALEYGSPQEL*QSPGWGSRKRK
Trigger: CTTTCTTTTTCTGCTCCCCCAACCTGGGCTTTGCCATAGCTCCTGTGGAGAGCCATATTCTAGAGCAAGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
3UTR GCA 72 bp CCACAGGTGCTGCTAGAGCTTGCCTACTGTGTCCCCTaGCAGAAACCACTCTATACTGATTATTCTAGACCA +
Preference number: 3 (lower is better)
Translates to: PQVLLELAYCVP*QKPLYTDYSRP
Trigger: TGGTCTAGAATAATCAGTATAGAGTGGTTTCTGGCAGGGGACACAGTAGGCAAGCTCTAGCAGCACCTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
3UTR CCA 72 bp CTACAGGGCATGATTCACCCTAGGGGAGCAATTGACTaGATGCTCTTGTGTTTCCCAGCTCGGGAAAGATAT +
Preference number: 3 (lower is better)
Translates to: LQGMIHPRGAID*MLLCFPARERY
Trigger: ATATCTTTCCCGAGCTGGGAAACACAAGAGCATCCAGTCAATTGCTCCCCTAGGGTGAATCATGCCCTGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
3UTR-3UTR CAA 90 bp GATGGTGCTAAACATCCTAAAAGCACACAGGACAGCCCCCACCAACGAATAATGATTGACTGGATGCTCTaGTGTTTCCCAGCTCGGGAA +
Preference number: 3 (lower is better)
Translates to: DGAKHPKSTQDSPHQRIMIDWML*CFPARE
Trigger: TTCCCGAGCTGGGAAACACAAGAGCATCCAGTCAAT...CATTATTCGTTGGTGGGGGCTGTCCTGTGTGCTTTTAGGATGTTTAGCACCATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
3UTR-3UTR CAA 90 bp CCACTGGTTCTCAACGAGGTGAAATTAGGCCCCTCACTCCCACTCCTTAGGGACTCAATCCTACTAAGATaGAGACACCTTGCTCTAGAA +
Preference number: 3 (lower is better)
Translates to: PLVLNEVKLGPSLPLLRDSILLR*RHLALE
Trigger: TTCTAGAGCAAGGTGTCTCAATCTTAGTAGGATTGA...GTCCCTAAGGAGTGGGAGTGAGGGGCCTAATTTCACCTCGTTGAGAACCAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
3UTR-3UTR CAA 90 bp GCTGCAAATTGGTGTTCTAAGGGAAGGTGGCTTGATGCTCTTCCTCGGGATGGTAATGTCTGGAGAAATTaGGTTGTCACCAGTTGCTGG +
Preference number: 3 (lower is better)
Translates to: AANWCSKGRWLDALPRDGNVWRN*VVTSCW
Trigger: CCAGCAACTGGTGACAACCAAATTTCTCCAGACATT...ACCATCCCGAGGAAGAGCATCAAGCCACCTTCCCTTAGAACACCAATTTGCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
3UTR-3UTR CAA 90 bp GCAAATTGGTGTTCTAAGGGAAGGTGGCTTGATGCTCTTCCTCGGGATGGTGCCAATGACAACTCTTTCTaGATGACAGCAGATGCTTCC +
Preference number: 3 (lower is better)
Translates to: ANWCSKGRWLDALPRDGANDNSF*MTADAS
Trigger: GGAAGCATCTGCTGTCATCAAGAAAGAGTTGTCATT...GGCACCATCCCGAGGAAGAGCATCAAGCCACCTTCCCTTAGAACACCAATTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
3UTR TCA 72 bp CACTCTCTATGGAGAAGACTGACCCCTTGGAAATGCTaGCTGTGTATGTCCCATAGGGATCAGAAGCTCACA +
Preference number: 3 (lower is better)
Translates to: HSLWRRLTPWKC*LCMSHRDQKLT
Trigger: TGTGAGCTTCTGATCCCTATGGGACATACACAGTCAGCATTTCCAAGGGGTCAGTCTTCTCCATAGAGAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
3UTR GCA 72 bp CTGGTAGGTCAGAGGCATTACCAGGGAAGGAGCCTGTaGAAGGCTATTTCTTTCTTTTTGTTCCAGCAATCC +
Preference number: 3 (lower is better)
Translates to: LVGQRHYQGRSL*KAISFFLFQQS
Trigger: GGATTGCTGGAACAAAAAGAAAGAAATAGCCTTGCACAGGCTCCTTCCCTGGTAATGCCTCTGACCTACCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
3UTR CCA 72 bp TGGTGGCAAATGAAAGGCACCAACCTTGCTGCAAATTaGTGTTCTAAGGGAAGGTGGCTTGATGCTCTTCCT +
Preference number: 3 (lower is better)
Translates to: WWQMKGTNLAAN*CSKGRWLDALP
Trigger: AGGAAGAGCATCAAGCCACCTTCCCTTAGAACACCAATTTGCAGCAAGGTTGGTGCCTTTCATTTGCCACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
3UTR-3UTR CAA 90 bp CATGGCAAACACAGTCCCGAACCACAAAAACTGCCAGTGTGTACTACTGACTTTATTGACTGGATGCTCTaGTGTTTCCCAGCTCGGGAA +
Preference number: 3 (lower is better)
Translates to: HGKHSPEPQKLPVCTTDFIDWML*CFPARE
Trigger: TTCCCGAGCTGGGAAACACAAGAGCATCCAGTCAAT...AAAGTCAGTAGTACACACTGGCAGTTTTTGTGGTTCGGGACTGTGTTTGCCATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
3UTR-3UTR CAA 90 bp GCAAATTGGTGTTCTAAGGGAAGGTGGCTTGATGCTCTTCCTCGGGATGGTGCCACAAATGGAATTGTATaGTGCAAGACTCACTCTACC +
Preference number: 3 (lower is better)
Translates to: ANWCSKGRWLDALPRDGATNGIV*CKTHST
Trigger: GGTAGAGTGAGTCTTGCACAATACAATTCCATTTGT...GGCACCATCCCGAGGAAGAGCATCAAGCCACCTTCCCTTAGAACACCAATTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
3UTR-3UTR CAA 90 bp GCAAATTGGTGTTCTAAGGGAAGGTGGCTTGATGCTCTTCCTCGGGATGGTGCCTTGTTAATTTTGCACTaGAATCGAGGTGGCATCAGA +
Preference number: 3 (lower is better)
Translates to: ANWCSKGRWLDALPRDGALLILH*NRGGIR
Trigger: TCTGATGCCACCTCGATTCAAGTGCAAAATTAACAA...GGCACCATCCCGAGGAAGAGCATCAAGCCACCTTCCCTTAGAACACCAATTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
3UTR-3UTR CAA 90 bp GCTGAGTGGTTGTTACTACAACATGGCAAACACAGTCCCGAACCACAAAAACTGTCCTACACAGTCTGCTaGCCTTGGCATTCACGTTTC +
Preference number: 3 (lower is better)
Translates to: AEWLLLQHGKHSPEPQKLSYTVC*PWHSRF
Trigger: GAAACGTGAATGCCAAGGCAAGCAGACTGTGTAGGA...CAGTTTTTGTGGTTCGGGACTGTGTTTGCCATGTTGTAGTAACAACCACTCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427124.1
3UTR-3UTR CAA 90 bp AAATCCCTCTCTCTAGCTGGTTATCAGAGGCCACAGAACAGCCTGCTTTCTGCACCTAAGAACTCATCATaGGGTGGAAGTTTGTCCTAC +
Preference number: 3 (lower is better)
Translates to: KSLSLAGYQRPQNSLLSAPKNSS*GGSLSY
Trigger: GTAGGACAAACTTCCACCCAATGATGAGTTCTTAGG...TGCAGAAAGCAGGCTGTTCTGTGGCCTCTGATAACCAGCTAGAGAGAGGGATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427124.1
3UTR-3UTR CAA 90 bp CTGAGTGGTTGTTACTACAACATGGCAAACACAGTCCCGAACCACAAAAACTGCTCATTGGGTGGAAGTTaGTCCTACACAGTCTGCTTG +
Preference number: 3 (lower is better)
Translates to: LSGCYYNMANTVPNHKNCSLGGS*SYTVCL
Trigger: CAAGCAGACTGTGTAGGACAAACTTCCACCCAATGA...GCAGTTTTTGTGGTTCGGGACTGTGTTTGCCATGTTGTAGTAACAACCACTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427124.1
3UTR GCA 72 bp CGGCATGGCTATTTGTATCATAACGCAAGCACAGTGTaGATAAGAATGTCAGGTCTGACTCGTCAGCACGTT +
Preference number: 3 (lower is better)
Translates to: RHGYLYHNASTV*IRMSGLTRQHV
Trigger: AACGTGCTGACGAGTCAGACCTGACATTCTTATGCACACTGTGCTTGCGTTATGATACAAATAGCCATGCCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
3UTR GCA 72 bp AGCTGGTTATCAGAGGCCACAGAACAGCCTGCTTTCTaGAAACTCTCTGAAGAGAGATCCTTAATGGATGTC +
Preference number: 3 (lower is better)
Translates to: SWLSEATEQPAF*KLSEERSLMDV
Trigger: GACATCCATTAAGGATCTCTCTTCAGAGAGTTTGCAGAAAGCAGGCTGTTCTGTGGCCTCTGATAACCAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
3UTR CCA 72 bp AATCCTACTAAGATTGAGACACCTTGCTCTAGAATATaGCTCTCCACAGGAGCTATGGCAAAGCCCAGGTTG +
Preference number: 3 (lower is better)
Translates to: NPTKIETPCSRI*LSTGAMAKPRL
Trigger: CAACCTGGGCTTTGCCATAGCTCCTGTGGAGAGCCATATTCTAGAGCAAGGTGTCTCAATCTTAGTAGGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
3UTR-3UTR CAA 90 bp GCTGCAAATTGGTGTTCTAAGGGAAGGTGGCTTGATGCTCTTCCTCGGGATGGTGTTCAACAAATGGAATaGTATTGTGCAAGACTCACT +
Preference number: 3 (lower is better)
Translates to: AANWCSKGRWLDALPRDGVQQME*YCARLT
Trigger: AGTGAGTCTTGCACAATACAATTCCATTTGTTGAAC...ACCATCCCGAGGAAGAGCATCAAGCCACCTTCCCTTAGAACACCAATTTGCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
3UTR-3UTR CAA 90 bp TACTACAACATGGCAAACACAGTCCCGAACCACAAAAACTGCCAGTGTGTACTACATAGGGCTGAGTGGTaGTTACTACAACATGGCAAA +
Preference number: 3 (lower is better)
Translates to: YYNMANTVPNHKNCQCVLHRAEW*LLQHGK
Trigger: TTTGCCATGTTGTAGTAACAACCACTCAGCCCTATG...TAGTACACACTGGCAGTTTTTGTGGTTCGGGACTGTGTTTGCCATGTTGTAGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
3UTR-3UTR CAA 90 bp GCTGAGTGGTTGTTACTACAACATGGCAAACACAGTCCCGAACCACAAAAACTGAATTTAAATCAGCACTaGAGGTGGAAAGGGTGTCCT +
Preference number: 3 (lower is better)
Translates to: AEWLLLQHGKHSPEPQKLNLNQH*RWKGCP
Trigger: AGGACACCCTTTCCACCTCAAGTGCTGATTTAAATT...CAGTTTTTGTGGTTCGGGACTGTGTTTGCCATGTTGTAGTAACAACCACTCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
3UTR TCA 72 bp TATAGCATTAGAAGCCTCACTCTCTATGGAGAAGACTaGCCCCTTGGAAATGCTGACTGTGTATGTCCCATA +
Preference number: 3 (lower is better)
Translates to: YSIRSLTLYGED*PLGNADCVCPI
Trigger: TATGGGACATACACAGTCAGCATTTCCAAGGGGTCAGTCTTCTCCATAGAGAGTGAGGCTTCTAATGCTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
3UTR TCA 72 bp AGAACCAAAGGCGGAGGAGAAATAGGAGTACAGAGATaGCAGTGTGGCTGCAAACAAAGACTTCACAAGAAA +
Preference number: 3 (lower is better)
Translates to: RTKGGGEIGVQR*QCGCKQRLHKK
Trigger: TTTCTTGTGAAGTCTTTGTTTGCAGCCACACTGTCATCTCTGTACTCCTATTTCTCCTCCGCCTTTGGTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
3UTR-3UTR CAA 90 bp CCTACTGTGTCCCCTGCCAGAAACCACTCTATACTGATTATTCTAGACCACTGGAGTCACCATCAAGCATaGGTAAATACAAAAGCGATT +
Preference number: 3 (lower is better)
Translates to: PTVSPARNHSILIILDHWSHHQA*VNTKAI
Trigger: AATCGCTTTTGTATTTACCAATGCTTGATGGTGACT...CCAGTGGTCTAGAATAATCAGTATAGAGTGGTTTCTGGCAGGGGACACAGTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
3UTR-3UTR CAA 90 bp TCGGGGCAAAGAAAGCTCTATAATACATCTCTGTCTAGACATAAGCTAAAGTGTACCCTAGGGGAGCAATaGACTGGATGCTCTTGTGTT +
Preference number: 3 (lower is better)
Translates to: SGQRKLYNTSLSRHKLKCTLGEQ*TGCSCV
Trigger: AACACAAGAGCATCCAGTCAATTGCTCCCCTAGGGT...ACACTTTAGCTTATGTCTAGACAGAGATGTATTATAGAGCTTTCTTTGCCCCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
3UTR-3UTR CAA 90 bp CCTACTGTGTCCCCTGCCAGAAACCACTCTATACTGATTATTCTAGACCACTGGGTTCTGGTATTTATATaGCCTGATGACAGTGAGTTT +
Preference number: 3 (lower is better)
Translates to: PTVSPARNHSILIILDHWVLVFI*PDDSEF
Trigger: AAACTCACTGTCATCAGGCAATATAAATACCAGAAC...CCAGTGGTCTAGAATAATCAGTATAGAGTGGTTTCTGGCAGGGGACACAGTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
3UTR-3UTR CAA 90 bp GCTGAGTGGTTGTTACTACAACATGGCAAACACAGTCCCGAACCACAAAAACTGGATGTTCATAAGGATTaGGATTCACAGTGGGTTTTC +
Preference number: 3 (lower is better)
Translates to: AEWLLLQHGKHSPEPQKLDVHKD*DSQWVF
Trigger: GAAAACCCACTGTGAATCCAAATCCTTATGAACATC...CAGTTTTTGTGGTTCGGGACTGTGTTTGCCATGTTGTAGTAACAACCACTCAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
3UTR-3UTR CAA 90 bp ATGAAAGGCACCAACCTTGCTGCAAATTGGTGTTCTAAGGGAAGGTGGCTTGATTCAGAATTGTTAATTTaGCACTTGAATCGAGGTGGC +
Preference number: 3 (lower is better)
Translates to: MKGTNLAANWCSKGRWLDSELLI*HLNRGG
Trigger: GCCACCTCGATTCAAGTGCAAAATTAACAATTCTGA...ATCAAGCCACCTTCCCTTAGAACACCAATTTGCAGCAAGGTTGGTGCCTTTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
3UTR-3UTR CAA 90 bp TTTTGTTCCAGCAATCCAGTCGTCAAGTCACCATCAAGCATTGGTAAATACAAACACAGTCTGCTTGCCTaGGCATTCACGTTTCGAACA +
Preference number: 3 (lower is better)
Translates to: FCSSNPVVKSPSSIGKYKHSLLA*AFTFRT
Trigger: TGTTCGAAACGTGAATGCCAAGGCAAGCAGACTGTG...TTTGTATTTACCAATGCTTGATGGTGACTTGACGACTGGATTGCTGGAACAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427124.1
3UTR-3UTR CAA 90 bp TACTACAACATGGCAAACACAGTCCCGAACCACAAAAACTGCCAGTGTGTACTAGATGTTCATAAGGATTaGGATTCACAGTGGGTTTTC +
Preference number: 3 (lower is better)
Translates to: YYNMANTVPNHKNCQCVLDVHKD*DSQWVF
Trigger: GAAAACCCACTGTGAATCCAAATCCTTATGAACATC...TAGTACACACTGGCAGTTTTTGTGGTTCGGGACTGTGTTTGCCATGTTGTAGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
3UTR-3UTR CAA 90 bp GAGATGTTCATAAGGATTTGGATTCACAGTGGGTTTTCTCACCCTGGTTCTGGTAGTCACCATCAAGCATaGGTAAATACAAAAGCGATT +
Preference number: 3 (lower is better)
Translates to: EMFIRIWIHSGFSHPGSGSHHQA*VNTKAI
Trigger: AATCGCTTTTGTATTTACCAATGCTTGATGGTGACT...ACCAGAACCAGGGTGAGAAAACCCACTGTGAATCCAAATCCTTATGAACATCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
3UTR-3UTR CAA 90 bp ATGTCAGGTCTGACTCGTCAGCACGTTAATTTTGGAAATGACAACTCTTTCTTGAATGACAACTCTTTCTaGATGACAGCAGATGCTTCC +
Preference number: 3 (lower is better)
Translates to: MSGLTRQHVNFGNDNSFLNDNSF*MTADAS
Trigger: GGAAGCATCTGCTGTCATCAAGAAAGAGTTGTCATT...CAAGAAAGAGTTGTCATTTCCAAAATTAACGTGCTGACGAGTCAGACCTGACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
3UTR-3UTR CAA 90 bp GATTCACAGTGGGTTTTCTCACCCTGGTTCTGGTATTTATATTGCCTGATGACAGTTCTGGTATTTATATaGCCTGATGACAGTGAGTTT +
Preference number: 3 (lower is better)
Translates to: DSQWVFSPWFWYLYCLMTVLVFI*PDDSEF
Trigger: AAACTCACTGTCATCAGGCAATATAAATACCAGAAC...TGTCATCAGGCAATATAAATACCAGAACCAGGGTGAGAAAACCCACTGTGAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
3UTR CCA 72 bp AAAGCCAGAGATGTTCATAAGGATTTGGATTCACAGTaGGTTTTCTCACCCTGGTTCTGGTATTTATATTGC +
Preference number: 3 (lower is better)
Translates to: KARDVHKDLDSQ*VFSPWFWYLYC
Trigger: GCAATATAAATACCAGAACCAGGGTGAGAAAACCCACTGTGAATCCAAATCCTTATGAACATCTCTGGCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
3UTR-3UTR CAA 90 bp AGAAAGCTCTATAATACATCTCTGTCTAGACATAAGCTAAAGTGTGGAATTCCTCATAGGGCTGAGTGGTaGTTACTACAACATGGCAAA +
Preference number: 3 (lower is better)
Translates to: RKLYNTSLSRHKLKCGIPHRAEW*LLQHGK
Trigger: TTTGCCATGTTGTAGTAACAACCACTCAGCCCTATG...AGGAATTCCACACTTTAGCTTATGTCTAGACAGAGATGTATTATAGAGCTTTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
3UTR TCA 72 bp ATGGATGTCCCATTCAATTCTAGTAAATTCTTGCTGTaGCTCTCGCTGTGCCAATGCTTTGATGCAAAATTT +
Preference number: 3 (lower is better)
Translates to: MDVPFNSSKFLL*LSLCQCFDAKF
Trigger: AAATTTTGCATCAAAGCATTGGCACAGCGAGAGTCACAGCAAGAATTTACTAGAATTGAATGGGACATCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
3UTR CCA 72 bp TGTTGTTCAGAGTCTGGAAAGAATTTCTCAATGACCTaGGTAGAAGGAAGTTGTAAAATGTTTATCAGTTTA +
Preference number: 3 (lower is better)
Translates to: CCSESGKNFSMT*VEGSCKMFISL
Trigger: TAAACTGATAAACATTTTACAACTTCCTTCTACCCAGGTCATTGAGAAATTCTTTCCAGACTCTGAACAACA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CCA 90 bp CCACTGGTTCTCAACGAGGTGAAATTAGGCCCCTCACTCCCACTCCTTAGGGACGACAGCGCCAACAACTaGCTTCTGAGCCCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: PLVLNEVKLGPSLPLLRDDSANN*LLSPAL
Trigger: CAGAGCTGGGCTCAGAAGCCAGTTGTTGGCGCTGTC...GTCCCTAAGGAGTGGGAGTGAGGGGCCTAATTTCACCTCGTTGAGAACCAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR TCA 90 bp TGGTGTTCTAAGGGAAGGTGGCTTGATGCTCTTCCTCGGGATGGTGCCGGCATGCCACAGTGTGTTGCTTaGATCCCCTCTTACACACCG +
Preference number: 4 (lower is better)
Translates to: WCSKGRWLDALPRDGAGMPQCVA*IPSYTP
Trigger: CGGTGTGTAAGAGGGGATTCAAGCAACACACTGTGG...CATGCCGGCACCATCCCGAGGAAGAGCATCAAGCCACCTTCCCTTAGAACACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR TCA 90 bp CAAAGTACTTGTTCCCAACCCTGTCCAGCAATAGGCCCGTCTATGTGCCCACCCTCACGTTTCGAACACTaGGCAGGCTTCCACCAGTCC +
Preference number: 4 (lower is better)
Translates to: QSTCSQPCPAIGPSMCPPSRFEH*AGFHQS
Trigger: GGACTGGTGGAAGCCTGCTCAGTGTTCGAAACGTGA...GGGTGGGCACATAGACGGGCCTATTGCTGGACAGGGTTGGGAACAAGTACTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR GCA 90 bp TGGTGTTCTAAGGGAAGGTGGCTTGATGCTCTTCCTCGGGATGGTGCCGGCATGATTTGGAGCTCATTCTaGCGGCAGCCGGGAATTCCT +
Preference number: 4 (lower is better)
Translates to: WCSKGRWLDALPRDGAGMIWSSF*RQPGIP
Trigger: AGGAATTCCCGGCTGCCGGCAGAATGAGCTCCAAAT...CATGCCGGCACCATCCCGAGGAAGAGCATCAAGCCACCTTCCCTTAGAACACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CCA 90 bp GCAAATTGGTGTTCTAAGGGAAGGTGGCTTGATGCTCTTCCTCGGGATGGTGCCTCTCCACAGGAGCTATaGCAAAGCCCAGGTTGGGGG +
Preference number: 4 (lower is better)
Translates to: ANWCSKGRWLDALPRDGASPQEL*QSPGWG
Trigger: CCCCCAACCTGGGCTTTGCCATAGCTCCTGTGGAGA...GGCACCATCCCGAGGAAGAGCATCAAGCCACCTTCCCTTAGAACACCAATTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CCA 90 bp TGGTGTTCTAAGGGAAGGTGGCTTGATGCTCTTCCTCGGGATGGTGCCGGCATGAAGCCTCACTCTCTATaGAGAAGACTGACCCCTTGG +
Preference number: 4 (lower is better)
Translates to: WCSKGRWLDALPRDGAGMKPHSL*RRLTPW
Trigger: CCAAGGGGTCAGTCTTCTCCATAGAGAGTGAGGCTT...CATGCCGGCACCATCCCGAGGAAGAGCATCAAGCCACCTTCCCTTAGAACACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
3UTR CAA 72 bp ACCTTGCTGCAAATTGGTGTTCTAAGGGAAGGTGGCTaGATGCTCTTCCTCGGGATGGTGCCGGCATGGCTA +
Preference number: 4 (lower is better)
Translates to: TLLQIGVLREGG*MLFLGMVPAWL
Trigger: TAGCCATGCCGGCACCATCCCGAGGAAGAGCATCAAGCCACCTTCCCTTAGAACACCAATTTGCAGCAAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR TCA 90 bp CCACTGGTTCTCAACGAGGTGAAATTAGGCCCCTCACTCCCACTCCTTAGGGACCGCCTCCTCCACACATaGGTTCACTTACACAGTGTT +
Preference number: 4 (lower is better)
Translates to: PLVLNEVKLGPSLPLLRDRLLHT*VHLHSV
Trigger: AACACTGTGTAAGTGAACTCATGTGTGGAGGAGGCG...GTCCCTAAGGAGTGGGAGTGAGGGGCCTAATTTCACCTCGTTGAGAACCAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR GCA 90 bp CAAAGTACTTGTTCCCAACCCTGTCCAGCAATAGGCCCGTCTATGTGCCCACCCCCTACACAGTCTGCTTaGCTTGGCATTCACGTTTCG +
Preference number: 4 (lower is better)
Translates to: QSTCSQPCPAIGPSMCPPPTQSA*LGIHVS
Trigger: CGAAACGTGAATGCCAAGGCAAGCAGACTGTGTAGG...GGGTGGGCACATAGACGGGCCTATTGCTGGACAGGGTTGGGAACAAGTACTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR GCA 90 bp GGAGCAATTGACTGGATGCTCTTGTGTTTCCCAGCTCGGGAAAGATATTTCCCCGGTGCTGCTAGAGCTTaGCTACTGTGTCCCCTGCCA +
Preference number: 4 (lower is better)
Translates to: GAIDWMLLCFPARERYFPGAARA*LLCPLP
Trigger: TGGCAGGGGACACAGTAGGCAAGCTCTAGCAGCACC...GGGGAAATATCTTTCCCGAGCTGGGAAACACAAGAGCATCCAGTCAATTGCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CCA 90 bp CCACTGGTTCTCAACGAGGTGAAATTAGGCCCCTCACTCCCACTCCTTAGGGACACTCAGCTCCTTCCATaGGAATACAAGAGGGGTAGG +
Preference number: 4 (lower is better)
Translates to: PLVLNEVKLGPSLPLLRDTQLLP*EYKRGR
Trigger: CCTACCCCTCTTGTATTCCCATGGAAGGAGCTGAGT...GTCCCTAAGGAGTGGGAGTGAGGGGCCTAATTTCACCTCGTTGAGAACCAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CCA 90 bp CAAAGTACTTGTTCCCAACCCTGTCCAGCAATAGGCCCGTCTATGTGCCCACCCACTCAGCTCCTTCCATaGGAATACAAGAGGGGTAGG +
Preference number: 4 (lower is better)
Translates to: QSTCSQPCPAIGPSMCPPTQLLP*EYKRGR
Trigger: CCTACCCCTCTTGTATTCCCATGGAAGGAGCTGAGT...GGGTGGGCACATAGACGGGCCTATTGCTGGACAGGGTTGGGAACAAGTACTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR TCA 90 bp GCAAATTGGTGTTCTAAGGGAAGGTGGCTTGATGCTCTTCCTCGGGATGGTGCCATGAAATTTCCCGGCTaGTTACGCCTCCTCCACACA +
Preference number: 4 (lower is better)
Translates to: ANWCSKGRWLDALPRDGAMKFPG*LRLLHT
Trigger: TGTGTGGAGGAGGCGTAATCAGCCGGGAAATTTCAT...GGCACCATCCCGAGGAAGAGCATCAAGCCACCTTCCCTTAGAACACCAATTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR TCA 90 bp GCAAATTGGTGTTCTAAGGGAAGGTGGCTTGATGCTCTTCCTCGGGATGGTGCCCTCTATGGAGAAGACTaGCCCCTTGGAAATGCTGAC +
Preference number: 4 (lower is better)
Translates to: ANWCSKGRWLDALPRDGALYGED*PLGNAD
Trigger: GTCAGCATTTCCAAGGGGTCAGTCTTCTCCATAGAG...GGCACCATCCCGAGGAAGAGCATCAAGCCACCTTCCCTTAGAACACCAATTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR GCA 90 bp TGGTGTTCTAAGGGAAGGTGGCTTGATGCTCTTCCTCGGGATGGTGCCGGCATGCACTTACACAGTGTTTaGTACGGCAGTAGAGGTGAT +
Preference number: 4 (lower is better)
Translates to: WCSKGRWLDALPRDGAGMHLHSV*YGSRGD
Trigger: ATCACCTCTACTGCCGTAGCAAACACTGTGTAAGTG...CATGCCGGCACCATCCCGAGGAAGAGCATCAAGCCACCTTCCCTTAGAACACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR GCA 90 bp ATGGCTCTCCACAGGAGCTATGGCAAAGCCCAGGTTGGGGGAGCAGAAAAAGAAGACACACTCAGGAACTaGGCAGTCTGCTACAACACA +
Preference number: 4 (lower is better)
Translates to: MALHRSYGKAQVGGAEKEDTLRN*AVCYNT
Trigger: TGTGTTGTAGCAGACTGCGCAGTTCCTGAGTGTGTC...TTCTTTTTCTGCTCCCCCAACCTGGGCTTTGCCATAGCTCCTGTGGAGAGCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000312504.10
CDS-3UTR CCA 90 bp ATGGCTCTCCACAGGAGCTATGGCAAAGCCCAGGTTGGGGGAGCAGAAAAAGAATGCAGATTGCTGATTTaGAGCTCATTCTGCCGGCAG +
Preference number: 4 (lower is better)
Translates to: MALHRSYGKAQVGGAEKECRLLI*SSFCRQ
Trigger: CTGCCGGCAGAATGAGCTCCAAATCAGCAATCTGCA...TTCTTTTTCTGCTCCCCCAACCTGGGCTTTGCCATAGCTCCTGTGGAGAGCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CCA 90 bp CTGGATGCTCTTGTGTTTCCCAGCTCGGGAAAGATATTTCCCCTGACATTCCTTTCTCCACAGGAGCTATaGCAAAGCCCAGGTTGGGGG +
Preference number: 4 (lower is better)
Translates to: LDALVFPSSGKIFPLTFLSPQEL*QSPGWG
Trigger: CCCCCAACCTGGGCTTTGCCATAGCTCCTGTGGAGA...AAGGAATGTCAGGGGAAATATCTTTCCCGAGCTGGGAAACACAAGAGCATCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR TCA 90 bp CCACTGGTTCTCAACGAGGTGAAATTAGGCCCCTCACTCCCACTCCTTAGGGACGTGGAAAGGGTGTCCTaGATCTGTGTTTCAGACATA +
Preference number: 4 (lower is better)
Translates to: PLVLNEVKLGPSLPLLRDVERVS*ICVSDI
Trigger: TATGTCTGAAACACAGATTCAGGACACCCTTTCCAC...GTCCCTAAGGAGTGGGAGTGAGGGGCCTAATTTCACCTCGTTGAGAACCAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR GCA 90 bp ATGGCTCTCCACAGGAGCTATGGCAAAGCCCAGGTTGGGGGAGCAGAAAAAGAAGAGCAATTGACTGGATaGTCTTGTGTTTCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: MALHRSYGKAQVGGAEKEEQLTG*SCVSQL
Trigger: GAGCTGGGAAACACAAGAGCATCCAGTCAATTGCTC...TTCTTTTTCTGCTCCCCCAACCTGGGCTTTGCCATAGCTCCTGTGGAGAGCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CCA 90 bp AACATGGCAAACACAGTCCCGAACCACAAAAACTGCCAGTGTGTACTACTGACTGACAGCGCCAACAACTaGCTTCTGAGCCCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: NMANTVPNHKNCQCVLLTDSANN*LLSPAL
Trigger: CAGAGCTGGGCTCAGAAGCCAGTTGTTGGCGCTGTC...AGTCAGTAGTACACACTGGCAGTTTTTGTGGTTCGGGACTGTGTTTGCCATGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CCA 90 bp CAAAGTACTTGTTCCCAACCCTGTCCAGCAATAGGCCCGTCTATGTGCCCACCCTCATTACTGGAGATCTaGTCACCTTCATCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: QSTCSQPCPAIGPSMCPPSLLEI*SPSSAG
Trigger: TCCTGCTGATGAAGGTGACCAGATCTCCAGTAATGA...GGGTGGGCACATAGACGGGCCTATTGCTGGACAGGGTTGGGAACAAGTACTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CCA 90 bp ATGGCTCTCCACAGGAGCTATGGCAAAGCCCAGGTTGGGGGAGCAGAAAAAGAACACTTCAATGCCAGCTaGAATTATCGTCGTTCCTGC +
Preference number: 4 (lower is better)
Translates to: MALHRSYGKAQVGGAEKEHFNAS*NYRRSC
Trigger: GCAGGAACGACGATAATTCCAGCTGGCATTGAAGTG...TTCTTTTTCTGCTCCCCCAACCTGGGCTTTGCCATAGCTCCTGTGGAGAGCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CCA 90 bp CAAAGTACTTGTTCCCAACCCTGTCCAGCAATAGGCCCGTCTATGTGCCCACCCAATCAGCACTTGAGGTaGAAAGGGTGTCCTGAATCT +
Preference number: 4 (lower is better)
Translates to: QSTCSQPCPAIGPSMCPPNQHLR*KGCPES
Trigger: AGATTCAGGACACCCTTTCCACCTCAAGTGCTGATT...GGGTGGGCACATAGACGGGCCTATTGCTGGACAGGGTTGGGAACAAGTACTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CCA 90 bp CTGGATGCTCTTGTGTTTCCCAGCTCGGGAAAGATATTTCCCCTGACATTCCTTTGCTCTTCCTCGGGATaGTGCCGGCATGGCTATTTG +
Preference number: 4 (lower is better)
Translates to: LDALVFPSSGKIFPLTFLCSSSG*CRHGYL
Trigger: CAAATAGCCATGCCGGCACCATCCCGAGGAAGAGCA...AAGGAATGTCAGGGGAAATATCTTTCCCGAGCTGGGAAACACAAGAGCATCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR TCA 90 bp GATGGTGCTAAACATCCTAAAAGCACACAGGACAGCCCCCACCAACGAATAATGCCACAGTGTGTTGCTTaGATCCCCTCTTACACACCG +
Preference number: 4 (lower is better)
Translates to: DGAKHPKSTQDSPHQRIMPQCVA*IPSYTP
Trigger: CGGTGTGTAAGAGGGGATTCAAGCAACACACTGTGG...CATTATTCGTTGGTGGGGGCTGTCCTGTGTGCTTTTAGGATGTTTAGCACCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR TCA 90 bp AGCCCCCACCAACGAATAATGATCTGGCCCCAAATGTCAATCCTACTAAGATTGTCACGTTTCGAACACTaGGCAGGCTTCCACCAGTCC +
Preference number: 4 (lower is better)
Translates to: SPHQRIMIWPQMSILLRLSRFEH*AGFHQS
Trigger: GGACTGGTGGAAGCCTGCTCAGTGTTCGAAACGTGA...CAATCTTAGTAGGATTGACATTTGGGGCCAGATCATTATTCGTTGGTGGGGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR GCA 90 bp ATGGCTCTCCACAGGAGCTATGGCAAAGCCCAGGTTGGGGGAGCAGAAAAAGAACCGAACCACAAAAACTaGCAGTGTGTACTACTGACT +
Preference number: 4 (lower is better)
Translates to: MALHRSYGKAQVGGAEKEPNHKN*QCVLLT
Trigger: AGTCAGTAGTACACACTGGCAGTTTTTGTGGTTCGG...TTCTTTTTCTGCTCCCCCAACCTGGGCTTTGCCATAGCTCCTGTGGAGAGCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR GCA 90 bp AAATCCCTCTCTCTAGCTGGTTATCAGAGGCCACAGAACAGCCTGCTTTCTGCATCTTCCTCGGGATGGTaGCGGCATGGCTATTTGTAT +
Preference number: 4 (lower is better)
Translates to: KSLSLAGYQRPQNSLLSASSSGW*RHGYLY
Trigger: ATACAAATAGCCATGCCGGCACCATCCCGAGGAAGA...TGCAGAAAGCAGGCTGTTCTGTGGCCTCTGATAACCAGCTAGAGAGAGGGATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR GCA 90 bp CAAAGTACTTGTTCCCAACCCTGTCCAGCAATAGGCCCGTCTATGTGCCCACCCCTCTCGCTGTGCCAATaGTTTGATGCAAAATTTCTG +
Preference number: 4 (lower is better)
Translates to: QSTCSQPCPAIGPSMCPPLSLCQ*FDAKFL
Trigger: CAGAAATTTTGCATCAAAGCATTGGCACAGCGAGAG...GGGTGGGCACATAGACGGGCCTATTGCTGGACAGGGTTGGGAACAAGTACTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
3UTR CAA 72 bp ATTGGGTGGAAGTTTGTCCTACACAGTCTGCTTGCCTaGGCATTCACGTTTCGAACACTGAGCAGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: IGWKFVLHSLLA*AFTFRTLSRLP
Trigger: TGGAAGCCTGCTCAGTGTTCGAAACGTGAATGCCAAGGCAAGCAGACTGTGTAGGACAAACTTCCACCCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427124.1
CDS-3UTR TCA 90 bp AACATGGCAAACACAGTCCCGAACCACAAAAACTGCCAGTGTGTACTACTGACTCCAACAACTGGCTTCTaGGCCCAGCTCTGTCGAAAT +
Preference number: 4 (lower is better)
Translates to: NMANTVPNHKNCQCVLLTPTTGF*AQLCRN
Trigger: ATTTCGACAGAGCTGGGCTCAGAAGCCAGTTGTTGG...AGTCAGTAGTACACACTGGCAGTTTTTGTGGTTCGGGACTGTGTTTGCCATGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR TCA 90 bp CTGGATGCTCTTGTGTTTCCCAGCTCGGGAAAGATATTTCCCCTGACATTCCTTCGCCTCCTCCACACATaGGTTCACTTACACAGTGTT +
Preference number: 4 (lower is better)
Translates to: LDALVFPSSGKIFPLTFLRLLHT*VHLHSV
Trigger: AACACTGTGTAAGTGAACTCATGTGTGGAGGAGGCG...AAGGAATGTCAGGGGAAATATCTTTCCCGAGCTGGGAAACACAAGAGCATCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR TCA 90 bp CTTGATGCTCTTCCTCGGGATGGTGCCGGCATGGCTATTTGTATCATAACGCAATCTGCTACAACACAGTaGACTTCATTGCTGGGCTCA +
Preference number: 4 (lower is better)
Translates to: LDALPRDGAGMAICIITQSATTQ*TSLLGS
Trigger: TGAGCCCAGCAATGAAGTTCACTGTGTTGTAGCAGA...TTGCGTTATGATACAAATAGCCATGCCGGCACCATCCCGAGGAAGAGCATCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312504.10
CDS-3UTR TCA 90 bp GATGGTGCTAAACATCCTAAAAGCACACAGGACAGCCCCCACCAACGAATAATGATCCATGGTGGCAAATaGAAGGCACCAACCTTGCTG +
Preference number: 4 (lower is better)
Translates to: DGAKHPKSTQDSPHQRIMIHGGK*KAPTLL
Trigger: CAGCAAGGTTGGTGCCTTTCATTTGCCACCATGGAT...CATTATTCGTTGGTGGGGGCTGTCCTGTGTGCTTTTAGGATGTTTAGCACCATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR GCA 90 bp AACATGGCAAACACAGTCCCGAACCACAAAAACTGCCAGTGTGTACTACTGACTATTTGGAGCTCATTCTaGCGGCAGCCGGGAATTCCT +
Preference number: 4 (lower is better)
Translates to: NMANTVPNHKNCQCVLLTIWSSF*RQPGIP
Trigger: AGGAATTCCCGGCTGCCGGCAGAATGAGCTCCAAAT...AGTCAGTAGTACACACTGGCAGTTTTTGTGGTTCGGGACTGTGTTTGCCATGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR GCA 90 bp GCAAATTGGTGTTCTAAGGGAAGGTGGCTTGATGCTCTTCCTCGGGATGGTGCCTCAGTAAGAGCAGTTTaGAGATTGCTGATTTGGAGC +
Preference number: 4 (lower is better)
Translates to: ANWCSKGRWLDALPRDGASVRAV*RLLIWS
Trigger: GCTCCAAATCAGCAATCTGCAAACTGCTCTTACTGA...GGCACCATCCCGAGGAAGAGCATCAAGCCACCTTCCCTTAGAACACCAATTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR GCA 90 bp GCACCAACCTTGCTGCAAATTGGTGTTCTAAGGGAAGGTGGCTTGATGCTCTTCTCGTCCACAGTGTGTTaGTTGAATCCCCTCTTACAC +
Preference number: 4 (lower is better)
Translates to: APTLLQIGVLREGGLMLFSSTVC*LNPLLH
Trigger: GTGTAAGAGGGGATTCAAGCAACACACTGTGGACGA...GAAGAGCATCAAGCCACCTTCCCTTAGAACACCAATTTGCAGCAAGGTTGGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR GCA 90 bp ATGGCTCTCCACAGGAGCTATGGCAAAGCCCAGGTTGGGGGAGCAGAAAAAGAAAAGATTGAGACACCTTaGTCTAGAATATGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: MALHRSYGKAQVGGAEKEKIETP*SRIWLS
Trigger: GGAGAGCCATATTCTAGAGCAAGGTGTCTCAATCTT...TTCTTTTTCTGCTCCCCCAACCTGGGCTTTGCCATAGCTCCTGTGGAGAGCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR GCA 90 bp CCTACTGTGTCCCCTGCCAGAAACCACTCTATACTGATTATTCTAGACCACTGGGCCTACTGTGTCCCCTaGCAGAAACCACTCTATACT +
Preference number: 4 (lower is better)
Translates to: PTVSPARNHSILIILDHWAYCVP*QKPLYT
Trigger: AGTATAGAGTGGTTTCTGGCAGGGGACACAGTAGGC...CCAGTGGTCTAGAATAATCAGTATAGAGTGGTTTCTGGCAGGGGACACAGTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR GCA 90 bp GTCTATATGATGTATCCATGGTGGCAAATGAAAGGCACCAACCTTGCTGCAAATGGTGCTGCTAGAGCTTaGCTACTGTGTCCCCTGCCA +
Preference number: 4 (lower is better)
Translates to: VYMMYPWWQMKGTNLAANGAARA*LLCPLP
Trigger: TGGCAGGGGACACAGTAGGCAAGCTCTAGCAGCACC...ATTTGCAGCAAGGTTGGTGCCTTTCATTTGCCACCATGGATACATCATATAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR GCA 90 bp ATGGCTCTCCACAGGAGCTATGGCAAAGCCCAGGTTGGGGGAGCAGAAAAAGAAATTCTAGTAAATTCTTaGTGTGACTCTCGCTGTGCC +
Preference number: 4 (lower is better)
Translates to: MALHRSYGKAQVGGAEKEILVNS*CDSRCA
Trigger: GGCACAGCGAGAGTCACAGCAAGAATTTACTAGAAT...TTCTTTTTCTGCTCCCCCAACCTGGGCTTTGCCATAGCTCCTGTGGAGAGCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CCA 90 bp CTTGATGCTCTTCCTCGGGATGGTGCCGGCATGGCTATTTGTATCATAACGCAATTAGGGCATTCTGGTTaGTCGCAAACAGGTCCATCT +
Preference number: 4 (lower is better)
Translates to: LDALPRDGAGMAICIITQLGHSG*SQTGPS
Trigger: AGATGGACCTGTTTGCGACCAACCAGAATGCCCTAA...TTGCGTTATGATACAAATAGCCATGCCGGCACCATCCCGAGGAAGAGCATCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CCA 90 bp CTTGATGCTCTTCCTCGGGATGGTGCCGGCATGGCTATTTGTATCATAACGCAAGCGACACCATTCACATaGAGAGGGCTTAAATTCCTC +
Preference number: 4 (lower is better)
Translates to: LDALPRDGAGMAICIITQATPFT*RGLKFL
Trigger: GAGGAATTTAAGCCCTCTCCATGTGAATGGTGTCGC...TTGCGTTATGATACAAATAGCCATGCCGGCACCATCCCGAGGAAGAGCATCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312504.10
CDS-3UTR CCA 90 bp AAATCCCTCTCTCTAGCTGGTTATCAGAGGCCACAGAACAGCCTGCTTTCTGCAACAGTCTGCTTGCCTTaGCATTCACGTTTCGAACAC +
Preference number: 4 (lower is better)
Translates to: KSLSLAGYQRPQNSLLSATVCLP*HSRFEH
Trigger: GTGTTCGAAACGTGAATGCCAAGGCAAGCAGACTGT...TGCAGAAAGCAGGCTGTTCTGTGGCCTCTGATAACCAGCTAGAGAGAGGGATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CCA 90 bp CAAAGTACTTGTTCCCAACCCTGTCCAGCAATAGGCCCGTCTATGTGCCCACCCTTCTCACCCTGGTTCTaGTATTTATATTGCCTGATG +
Preference number: 4 (lower is better)
Translates to: QSTCSQPCPAIGPSMCPPFSPWF*YLYCLM
Trigger: CATCAGGCAATATAAATACCAGAACCAGGGTGAGAA...GGGTGGGCACATAGACGGGCCTATTGCTGGACAGGGTTGGGAACAAGTACTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CCA 90 bp GCAAATTGGTGTTCTAAGGGAAGGTGGCTTGATGCTCTTCCTCGGGATGGTGCCTTTAGGGCAGGAGCATaGAATAAGCGACTAACTATG +
Preference number: 4 (lower is better)
Translates to: ANWCSKGRWLDALPRDGAFRAGA*NKRLTM
Trigger: CATAGTTAGTCGCTTATTCCATGCTCCTGCCCTAAA...GGCACCATCCCGAGGAAGAGCATCAAGCCACCTTCCCTTAGAACACCAATTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR TCA 90 bp CTTGATGCTCTTCCTCGGGATGGTGCCGGCATGGCTATTTGTATCATAACGCAAAAGAGTGTGGATTTTTaGAGTTGGCAACAGGCAACC +
Preference number: 4 (lower is better)
Translates to: LDALPRDGAGMAICIITQKSVDF*SWQQAT
Trigger: GGTTGCCTGTTGCCAACTTCAAAAATCCACACTCTT...TTGCGTTATGATACAAATAGCCATGCCGGCACCATCCCGAGGAAGAGCATCAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR GCA 90 bp GAGATGTTCATAAGGATTTGGATTCACAGTGGGTTTTCTCACCCTGGTTCTGGTCACAGTGAACTTCATTaGTGGGCTCACAGCGACACC +
Preference number: 4 (lower is better)
Translates to: EMFIRIWIHSGFSHPGSGHSELH*WAHSDT
Trigger: GGTGTCGCTGTGAGCCCAGCAATGAAGTTCACTGTG...ACCAGAACCAGGGTGAGAAAACCCACTGTGAATCCAAATCCTTATGAACATCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312504.10
CDS-3UTR GCA 90 bp GATGGTGCTAAACATCCTAAAAGCACACAGGACAGCCCCCACCAACGAATAATGTTGTCCTACACAGTCTaGTTGCCTTGGCATTCACGT +
Preference number: 4 (lower is better)
Translates to: DGAKHPKSTQDSPHQRIMLSYTV*LPWHSR
Trigger: ACGTGAATGCCAAGGCAAGCAGACTGTGTAGGACAA...CATTATTCGTTGGTGGGGGCTGTCCTGTGTGCTTTTAGGATGTTTAGCACCATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CCA 90 bp CTGAGTGGTTGTTACTACAACATGGCAAACACAGTCCCGAACCACAAAAACTGCGCAGTAGAGGTGATTTaGCTAGGCTCTGAGGATCAC +
Preference number: 4 (lower is better)
Translates to: LSGCYYNMANTVPNHKNCAVEVI*LGSEDH
Trigger: GTGATCCTCAGAGCCTAGCCAAATCACCTCTACTGC...GCAGTTTTTGTGGTTCGGGACTGTGTTTGCCATGTTGTAGTAACAACCACTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CCA 90 bp CAAAGTACTTGTTCCCAACCCTGTCCAGCAATAGGCCCGTCTATGTGCCCACCCCACTTTAGTACACTTTaGGTGAATTTTAGGGCATTC +
Preference number: 4 (lower is better)
Translates to: QSTCSQPCPAIGPSMCPPHFSTL*VNFRAF
Trigger: GAATGCCCTAAAATTCACCCAAAGTGTACTAAAGTG...GGGTGGGCACATAGACGGGCCTATTGCTGGACAGGGTTGGGAACAAGTACTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CCA 90 bp AAATCCCTCTCTCTAGCTGGTTATCAGAGGCCACAGAACAGCCTGCTTTCTGCAGATTTGGATTCACAGTaGGTTTTCTCACCCTGGTTC +
Preference number: 4 (lower is better)
Translates to: KSLSLAGYQRPQNSLLSADLDSQ*VFSPWF
Trigger: GAACCAGGGTGAGAAAACCCACTGTGAATCCAAATC...TGCAGAAAGCAGGCTGTTCTGTGGCCTCTGATAACCAGCTAGAGAGAGGGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CCA 90 bp GCTGCAAATTGGTGTTCTAAGGGAAGGTGGCTTGATGCTCTTCCTCGGGATGGTATGATGTATCCATGGTaGCAAATGAAAGGCACCAAC +
Preference number: 4 (lower is better)
Translates to: AANWCSKGRWLDALPRDGMMYPW*QMKGTN
Trigger: GTTGGTGCCTTTCATTTGCCACCATGGATACATCAT...ACCATCCCGAGGAAGAGCATCAAGCCACCTTCCCTTAGAACACCAATTTGCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR TCA 90 bp AGCCCCCACCAACGAATAATGATCTGGCCCCAAATGTCAATCCTACTAAGATTGGATTTGGCTAGGCTCTaGGGATCACAAACAGCAACA +
Preference number: 4 (lower is better)
Translates to: SPHQRIMIWPQMSILLRLDLARL*GSQTAT
Trigger: TGTTGCTGTTTGTGATCCTCAGAGCCTAGCCAAATC...CAATCTTAGTAGGATTGACATTTGGGGCCAGATCATTATTCGTTGGTGGGGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR TCA 90 bp GAGATGTTCATAAGGATTTGGATTCACAGTGGGTTTTCTCACCCTGGTTCTGGTACCCCTTGGAAATGCTaGCTGTGTATGTCCCATAGG +
Preference number: 4 (lower is better)
Translates to: EMFIRIWIHSGFSHPGSGTPWKC*LCMSHR
Trigger: CCTATGGGACATACACAGTCAGCATTTCCAAGGGGT...ACCAGAACCAGGGTGAGAAAACCCACTGTGAATCCAAATCCTTATGAACATCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR TCA 90 bp CCTACTGTGTCCCCTGCCAGAAACCACTCTATACTGATTATTCTAGACCACTGGAAGAGTGTGGATTTTTaGAGTTGGCAACAGGCAACC +
Preference number: 4 (lower is better)
Translates to: PTVSPARNHSILIILDHWKSVDF*SWQQAT
Trigger: GGTTGCCTGTTGCCAACTTCAAAAATCCACACTCTT...CCAGTGGTCTAGAATAATCAGTATAGAGTGGTTTCTGGCAGGGGACACAGTAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR GCA 90 bp ATGGCTCTCCACAGGAGCTATGGCAAAGCCCAGGTTGGGGGAGCAGAAAAAGAATTTGTGTTAAACATGTaGAGTGTTGAAGCCATAGCA +
Preference number: 4 (lower is better)
Translates to: MALHRSYGKAQVGGAEKEFVLNM*SVEAIA
Trigger: TGCTATGGCTTCAACACTGCACATGTTTAACACAAA...TTCTTTTTCTGCTCCCCCAACCTGGGCTTTGCCATAGCTCCTGTGGAGAGCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR GCA 90 bp CCTACTGTGTCCCCTGCCAGAAACCACTCTATACTGATTATTCTAGACCACTGGCAGGGAAGGAGCCTGTaGAAGGCTATTTCTTTCTTT +
Preference number: 4 (lower is better)
Translates to: PTVSPARNHSILIILDHWQGRSL*KAISFF
Trigger: AAAGAAAGAAATAGCCTTGCACAGGCTCCTTCCCTG...CCAGTGGTCTAGAATAATCAGTATAGAGTGGTTTCTGGCAGGGGACACAGTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR GCA 90 bp AACATGGCAAACACAGTCCCGAACCACAAAAACTGCCAGTGTGTACTACTGACTGAGCAATTGACTGGATaGTCTTGTGTTTCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: NMANTVPNHKNCQCVLLTEQLTG*SCVSQL
Trigger: GAGCTGGGAAACACAAGAGCATCCAGTCAATTGCTC...AGTCAGTAGTACACACTGGCAGTTTTTGTGGTTCGGGACTGTGTTTGCCATGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR GCA 90 bp GAGATGTTCATAAGGATTTGGATTCACAGTGGGTTTTCTCACCCTGGTTCTGGTGCCTACTGTGTCCCCTaGCAGAAACCACTCTATACT +
Preference number: 4 (lower is better)
Translates to: EMFIRIWIHSGFSHPGSGAYCVP*QKPLYT
Trigger: AGTATAGAGTGGTTTCTGGCAGGGGACACAGTAGGC...ACCAGAACCAGGGTGAGAAAACCCACTGTGAATCCAAATCCTTATGAACATCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR GCA 90 bp CTGGATGCTCTTGTGTTTCCCAGCTCGGGAAAGATATTTCCCCTGACATTCCTTAACGCAAGCACAGTGTaGATAAGAATGTCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: LDALVFPSSGKIFPLTFLNASTV*IRMSGL
Trigger: CAGACCTGACATTCTTATGCACACTGTGCTTGCGTT...AAGGAATGTCAGGGGAAATATCTTTCCCGAGCTGGGAAACACAAGAGCATCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR GCA 90 bp AAATCCCTCTCTCTAGCTGGTTATCAGAGGCCACAGAACAGCCTGCTTTCTGCAATTCTAGTAAATTCTTaGTGTGACTCTCGCTGTGCC +
Preference number: 4 (lower is better)
Translates to: KSLSLAGYQRPQNSLLSAILVNS*CDSRCA
Trigger: GGCACAGCGAGAGTCACAGCAAGAATTTACTAGAAT...TGCAGAAAGCAGGCTGTTCTGTGGCCTCTGATAACCAGCTAGAGAGAGGGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CCA 90 bp CCTACTGTGTCCCCTGCCAGAAACCACTCTATACTGATTATTCTAGACCACTGGTTCTGGTTCATAGACTaGGTTGACACACTCAGGAAC +
Preference number: 4 (lower is better)
Translates to: PTVSPARNHSILIILDHWFWFID*VDTLRN
Trigger: GTTCCTGAGTGTGTCAACCCAGTCTATGAACCAGAA...CCAGTGGTCTAGAATAATCAGTATAGAGTGGTTTCTGGCAGGGGACACAGTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312504.10
CDS-3UTR CCA 90 bp AGCCCCCACCAACGAATAATGATCTGGCCCCAAATGTCAATCCTACTAAGATTGACAGTCTGCTTGCCTTaGCATTCACGTTTCGAACAC +
Preference number: 4 (lower is better)
Translates to: SPHQRIMIWPQMSILLRLTVCLP*HSRFEH
Trigger: GTGTTCGAAACGTGAATGCCAAGGCAAGCAGACTGT...CAATCTTAGTAGGATTGACATTTGGGGCCAGATCATTATTCGTTGGTGGGGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CCA 90 bp TACTACAACATGGCAAACACAGTCCCGAACCACAAAAACTGCCAGTGTGTACTAGCACTTGAATCGAGGTaGCATCAGATACCCTGTGTG +
Preference number: 4 (lower is better)
Translates to: YYNMANTVPNHKNCQCVLALESR*HQIPCV
Trigger: CACACAGGGTATCTGATGCCACCTCGATTCAAGTGC...TAGTACACACTGGCAGTTTTTGTGGTTCGGGACTGTGTTTGCCATGTTGTAGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CCA 90 bp ATGTCAGGTCTGACTCGTCAGCACGTTAATTTTGGAAATGACAACTCTTTCTTGTGCTCTTCCTCGGGATaGTGCCGGCATGGCTATTTG +
Preference number: 4 (lower is better)
Translates to: MSGLTRQHVNFGNDNSFLCSSSG*CRHGYL
Trigger: CAAATAGCCATGCCGGCACCATCCCGAGGAAGAGCA...CAAGAAAGAGTTGTCATTTCCAAAATTAACGTGCTGACGAGTCAGACCTGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CCA 90 bp CCACTGGTTCTCAACGAGGTGAAATTAGGCCCCTCACTCCCACTCCTTAGGGACAATTTCTCAATGACCTaGGTAGAAGGAAGTTGTAAA +
Preference number: 4 (lower is better)
Translates to: PLVLNEVKLGPSLPLLRDNFSMT*VEGSCK
Trigger: TTTACAACTTCCTTCTACCCAGGTCATTGAGAAATT...GTCCCTAAGGAGTGGGAGTGAGGGGCCTAATTTCACCTCGTTGAGAACCAGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
3UTR CAA 72 bp GTCCTGAATCTGTGTTTCAGACATAGGGCTGAGTGGTaGTTACTACAACATGGCAAACACAGTCCCGAACCA +
Preference number: 4 (lower is better)
Translates to: VLNLCFRHRAEW*LLQHGKHSPEP
Trigger: TGGTTCGGGACTGTGTTTGCCATGTTGTAGTAACAACCACTCAGCCCTATGTCTGAAACACAGATTCAGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
3UTR CAA 72 bp CACTCCTTAGGGACATTAGGCAATGTCTGGAGAAATTaGGTTGTCACCAGTTGCTGGGATGTTGCTAGTGGA +
Preference number: 4 (lower is better)
Translates to: HSLGTLGNVWRN*VVTSCWDVASG
Trigger: TCCACTAGCAACATCCCAGCAACTGGTGACAACCAAATTTCTCCAGACATTGCCTAATGTCCCTAAGGAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
3UTR CAA 72 bp GCATCCTTTCCTAAGAACTCATCATTGGGTGGAAGTTaGTCCTACACAGTCTGCTTGCCTTGGCATTCACGT +
Preference number: 4 (lower is better)
Translates to: ASFPKNSSLGGS*SYTVCLPWHSR
Trigger: ACGTGAATGCCAAGGCAAGCAGACTGTGTAGGACAAACTTCCACCCAATGATGAGTTCTTAGGAAAGGATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427124.1
CDS-3UTR TCA 90 bp AACATGTGCAGTGTTGAAGCCATAGCATCCTTTCCTAAGAACTCATCATTGGGTATGAAATTTCCCGGCTaGTTACGCCTCCTCCACACA +
Preference number: 4 (lower is better)
Translates to: NMCSVEAIASFPKNSSLGMKFPG*LRLLHT
Trigger: TGTGTGGAGGAGGCGTAATCAGCCGGGAAATTTCAT...ACCCAATGATGAGTTCTTAGGAAAGGATGCTATGGCTTCAACACTGCACATGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR TCA 90 bp ATGAAAGGCACCAACCTTGCTGCAAATTGGTGTTCTAAGGGAAGGTGGCTTGATGGTCACAGCCCAAAATaGACTAAAAGGTCAGGTATG +
Preference number: 4 (lower is better)
Translates to: MKGTNLAANWCSKGRWLDGHSPK*TKRSGM
Trigger: CATACCTGACCTTTTAGTTCATTTTGGGCTGTGACC...ATCAAGCCACCTTCCCTTAGAACACCAATTTGCAGCAAGGTTGGTGCCTTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR TCA 90 bp AAATCCCTCTCTCTAGCTGGTTATCAGAGGCCACAGAACAGCCTGCTTTCTGCAACTTTTAGCCAAATCTaGACTCAAAAGCCAGAGATG +
Preference number: 4 (lower is better)
Translates to: KSLSLAGYQRPQNSLLSATFSQI*TQKPEM
Trigger: CATCTCTGGCTTTTGAGTTCAGATTTGGCTAAAAGT...TGCAGAAAGCAGGCTGTTCTGTGGCCTCTGATAACCAGCTAGAGAGAGGGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR TCA 90 bp GCTGAGTGGTTGTTACTACAACATGGCAAACACAGTCCCGAACCACAAAAACTGGTGGAAAGGGTGTCCTaGATCTGTGTTTCAGACATA +
Preference number: 4 (lower is better)
Translates to: AEWLLLQHGKHSPEPQKLVERVS*ICVSDI
Trigger: TATGTCTGAAACACAGATTCAGGACACCCTTTCCAC...CAGTTTTTGTGGTTCGGGACTGTGTTTGCCATGTTGTAGTAACAACCACTCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR TCA 90 bp GTCTATATGATGTATCCATGGTGGCAAATGAAAGGCACCAACCTTGCTGCAAATACCCCTTGGAAATGCTaGCTGTGTATGTCCCATAGG +
Preference number: 4 (lower is better)
Translates to: VYMMYPWWQMKGTNLAANTPWKC*LCMSHR
Trigger: CCTATGGGACATACACAGTCAGCATTTCCAAGGGGT...ATTTGCAGCAAGGTTGGTGCCTTTCATTTGCCACCATGGATACATCATATAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR TCA 90 bp GATTCACAGTGGGTTTTCTCACCCTGGTTCTGGTATTTATATTGCCTGATGACAATCCATGGTGGCAAATaGAAGGCACCAACCTTGCTG +
Preference number: 4 (lower is better)
Translates to: DSQWVFSPWFWYLYCLMTIHGGK*KAPTLL
Trigger: CAGCAAGGTTGGTGCCTTTCATTTGCCACCATGGAT...TGTCATCAGGCAATATAAATACCAGAACCAGGGTGAGAAAACCCACTGTGAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR TCA 90 bp CTTGATGCTCTTCCTCGGGATGGTGCCGGCATGGCTATTTGTATCATAACGCAAATGCAGCATTGCTCATaGATGATTCATGACTGTCTA +
Preference number: 4 (lower is better)
Translates to: LDALPRDGAGMAICIITQMQHCS*MIHDCL
Trigger: TAGACAGTCATGAATCATTCATGAGCAATGCTGCAT...TTGCGTTATGATACAAATAGCCATGCCGGCACCATCCCGAGGAAGAGCATCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR TCA 90 bp AAATCCCTCTCTCTAGCTGGTTATCAGAGGCCACAGAACAGCCTGCTTTCTGCAGGAAACAGCCTGCAGTaGAACTTTGAGAAAAAGAAA +
Preference number: 4 (lower is better)
Translates to: KSLSLAGYQRPQNSLLSAGNSLQ*NFEKKK
Trigger: TTTCTTTTTCTCAAAGTTTCACTGCAGGCTGTTTCC...TGCAGAAAGCAGGCTGTTCTGTGGCCTCTGATAACCAGCTAGAGAGAGGGATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR GCA 90 bp GATGGTGCTAAACATCCTAAAAGCACACAGGACAGCCCCCACCAACGAATAATGTCAGTAAGAGCAGTTTaGAGATTGCTGATTTGGAGC +
Preference number: 4 (lower is better)
Translates to: DGAKHPKSTQDSPHQRIMSVRAV*RLLIWS
Trigger: GCTCCAAATCAGCAATCTGCAAACTGCTCTTACTGA...CATTATTCGTTGGTGGGGGCTGTCCTGTGTGCTTTTAGGATGTTTAGCACCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR GCA 90 bp CTGAGTGGTTGTTACTACAACATGGCAAACACAGTCCCGAACCACAAAAACTGCCAAACAGCAACAGCATaGTGTAGCTTAAAGCCCACT +
Preference number: 4 (lower is better)
Translates to: LSGCYYNMANTVPNHKNCQTATA*CSLKPT
Trigger: AGTGGGCTTTAAGCTACAGCATGCTGTTGCTGTTTG...GCAGTTTTTGTGGTTCGGGACTGTGTTTGCCATGTTGTAGTAACAACCACTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR GCA 90 bp GTCTATATGATGTATCCATGGTGGCAAATGAAAGGCACCAACCTTGCTGCAAATCCTACACAGTCTGCTTaGCTTGGCATTCACGTTTCG +
Preference number: 4 (lower is better)
Translates to: VYMMYPWWQMKGTNLAANPTQSA*LGIHVS
Trigger: CGAAACGTGAATGCCAAGGCAAGCAGACTGTGTAGG...ATTTGCAGCAAGGTTGGTGCCTTTCATTTGCCACCATGGATACATCATATAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR GCA 90 bp ATGTCAGGTCTGACTCGTCAGCACGTTAATTTTGGAAATGACAACTCTTTCTTGCTTGATGACAGCAGATaGTTCCAGGGAGGAGAGGCT +
Preference number: 4 (lower is better)
Translates to: MSGLTRQHVNFGNDNSFLLDDSR*FQGGEA
Trigger: AGCCTCTCCTCCCTGGAAGCATCTGCTGTCATCAAG...CAAGAAAGAGTTGTCATTTCCAAAATTAACGTGCTGACGAGTCAGACCTGACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR GCA 90 bp CTGGATGCTCTTGTGTTTCCCAGCTCGGGAAAGATATTTCCCCTGACATTCCTTCTCTCGCTGTGCCAATaGTTTGATGCAAAATTTCTG +
Preference number: 4 (lower is better)
Translates to: LDALVFPSSGKIFPLTFLLSLCQ*FDAKFL
Trigger: CAGAAATTTTGCATCAAAGCATTGGCACAGCGAGAG...AAGGAATGTCAGGGGAAATATCTTTCCCGAGCTGGGAAACACAAGAGCATCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR GCA 90 bp GCAAATTGGTGTTCTAAGGGAAGGTGGCTTGATGCTCTTCCTCGGGATGGTGCCTTAAAGGAAACAGCCTaGAGTGAAACTTTGAGAAAA +
Preference number: 4 (lower is better)
Translates to: ANWCSKGRWLDALPRDGALKETA*SETLRK
Trigger: TTTTCTCAAAGTTTCACTGCAGGCTGTTTCCTTTAA...GGCACCATCCCGAGGAAGAGCATCAAGCCACCTTCCCTTAGAACACCAATTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CCA 90 bp GTCTATATGATGTATCCATGGTGGCAAATGAAAGGCACCAACCTTGCTGCAAATTGCAGATTGCTGATTTaGAGCTCATTCTGCCGGCAG +
Preference number: 4 (lower is better)
Translates to: VYMMYPWWQMKGTNLAANCRLLI*SSFCRQ
Trigger: CTGCCGGCAGAATGAGCTCCAAATCAGCAATCTGCA...ATTTGCAGCAAGGTTGGTGCCTTTCATTTGCCACCATGGATACATCATATAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CCA 90 bp AGCCCCCACCAACGAATAATGATCTGGCCCCAAATGTCAATCCTACTAAGATTGAATTTTAGGGCATTCTaGTTGGTCGCAAACAGGTCC +
Preference number: 4 (lower is better)
Translates to: SPHQRIMIWPQMSILLRLNFRAF*LVANRS
Trigger: GGACCTGTTTGCGACCAACCAGAATGCCCTAAAATT...CAATCTTAGTAGGATTGACATTTGGGGCCAGATCATTATTCGTTGGTGGGGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CCA 90 bp GAGATGTTCATAAGGATTTGGATTCACAGTGGGTTTTCTCACCCTGGTTCTGGTAGGGGAGCAATTGACTaGATGCTCTTGTGTTTCCCA +
Preference number: 4 (lower is better)
Translates to: EMFIRIWIHSGFSHPGSGRGAID*MLLCFP
Trigger: TGGGAAACACAAGAGCATCCAGTCAATTGCTCCCCT...ACCAGAACCAGGGTGAGAAAACCCACTGTGAATCCAAATCCTTATGAACATCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CCA 90 bp CTGAGTGGTTGTTACTACAACATGGCAAACACAGTCCCGAACCACAAAAACTGCAGACATAGGGCTGAGTaGTTGTTACTACAACATGGC +
Preference number: 4 (lower is better)
Translates to: LSGCYYNMANTVPNHKNCRHRAE*LLLQHG
Trigger: GCCATGTTGTAGTAACAACCACTCAGCCCTATGTCT...GCAGTTTTTGTGGTTCGGGACTGTGTTTGCCATGTTGTAGTAACAACCACTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CCA 90 bp GATGGTGCTAAACATCCTAAAAGCACACAGGACAGCCCCCACCAACGAATAATGTTTAGGGCAGGAGCATaGAATAAGCGACTAACTATG +
Preference number: 4 (lower is better)
Translates to: DGAKHPKSTQDSPHQRIMFRAGA*NKRLTM
Trigger: CATAGTTAGTCGCTTATTCCATGCTCCTGCCCTAAA...CATTATTCGTTGGTGGGGGCTGTCCTGTGTGCTTTTAGGATGTTTAGCACCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CCA 90 bp GCACCAACCTTGCTGCAAATTGGTGTTCTAAGGGAAGGTGGCTTGATGCTCTTCACATTAGGCAATGTCTaGAGAAATTTGGTTGTCACC +
Preference number: 4 (lower is better)
Translates to: APTLLQIGVLREGGLMLFTLGNV*RNLVVT
Trigger: GGTGACAACCAAATTTCTCCAGACATTGCCTAATGT...GAAGAGCATCAAGCCACCTTCCCTTAGAACACCAATTTGCAGCAAGGTTGGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CCA 90 bp GGAGCAATTGACTGGATGCTCTTGTGTTTCCCAGCTCGGGAAAGATATTTCCCCTATATGATGTATCCATaGTGGCAAATGAAAGGCACC +
Preference number: 4 (lower is better)
Translates to: GAIDWMLLCFPARERYFPYMMYP*WQMKGT
Trigger: GGTGCCTTTCATTTGCCACCATGGATACATCATATA...GGGGAAATATCTTTCCCGAGCTGGGAAACACAAGAGCATCCAGTCAATTGCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR TCA 90 bp ATTGTTAATTTTGCACTTGAATCGAGGTGGCATCAGATACCCTGTGTGTTTTGTGTTCATAGACTGGGTTaGCACACTCAGGAACTGCGC +
Preference number: 4 (lower is better)
Translates to: IVNFALESRWHQIPCVFCVHRLG*HTQELR
Trigger: GCGCAGTTCCTGAGTGTGTCAACCCAGTCTATGAAC...ACAAAACACACAGGGTATCTGATGCCACCTCGATTCAAGTGCAAAATTAACAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312504.10
CDS-3UTR TCA 90 bp CATGGCAAACACAGTCCCGAACCACAAAAACTGCCAGTGTGTACTACTGACTTTGCCAGTGTGTACTACTaGCTTTTAGCCAAATCTGAA +
Preference number: 4 (lower is better)
Translates to: HGKHSPEPQKLPVCTTDFASVYY*LLAKSE
Trigger: TTCAGATTTGGCTAAAAGTCAGTAGTACACACTGGC...AAAGTCAGTAGTACACACTGGCAGTTTTTGTGGTTCGGGACTGTGTTTGCCATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR TCA 90 bp CATGGCAAACACAGTCCCGAACCACAAAAACTGCCAGTGTGTACTACTGACTTTGCTGTGCCAATGCTTTaGTGCAAAATTTCTGCACTT +
Preference number: 4 (lower is better)
Translates to: HGKHSPEPQKLPVCTTDFAVPML*CKISAL
Trigger: AAGTGCAGAAATTTTGCATCAAAGCATTGGCACAGC...AAAGTCAGTAGTACACACTGGCAGTTTTTGTGGTTCGGGACTGTGTTTGCCATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR TCA 90 bp AACATGGCAAACACAGTCCCGAACCACAAAAACTGCCAGTGTGTACTACTGACTGCTGTGCCAATGCTTTaGTGCAAAATTTCTGCACTT +
Preference number: 4 (lower is better)
Translates to: NMANTVPNHKNCQCVLLTAVPML*CKISAL
Trigger: AAGTGCAGAAATTTTGCATCAAAGCATTGGCACAGC...AGTCAGTAGTACACACTGGCAGTTTTTGTGGTTCGGGACTGTGTTTGCCATGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR TCA 90 bp GATTCACAGTGGGTTTTCTCACCCTGGTTCTGGTATTTATATTGCCTGATGACAAGTAAATTCTTGCTGTaGCTCTCGCTGTGCCAATGC +
Preference number: 4 (lower is better)
Translates to: DSQWVFSPWFWYLYCLMTSKFLL*LSLCQC
Trigger: GCATTGGCACAGCGAGAGTCACAGCAAGAATTTACT...TGTCATCAGGCAATATAAATACCAGAACCAGGGTGAGAAAACCCACTGTGAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR TCA 90 bp ATGAAAGGCACCAACCTTGCTGCAAATTGGTGTTCTAAGGGAAGGTGGCTTGATGAAACAAACAACAGATaGGACCAGAGCTCTGTTGTT +
Preference number: 4 (lower is better)
Translates to: MKGTNLAANWCSKGRWLDETNNR*DQSSVV
Trigger: AACAACAGAGCTCTGGTCTCATCTGTTGTTTGTTTC...ATCAAGCCACCTTCCCTTAGAACACCAATTTGCAGCAAGGTTGGTGCCTTTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR TCA 90 bp CTGAGTGGTTGTTACTACAACATGGCAAACACAGTCCCGAACCACAAAAACTGCGAAACAAACAACAGATaGGACCAGAGCTCTGTTGTT +
Preference number: 4 (lower is better)
Translates to: LSGCYYNMANTVPNHKNCETNNR*DQSSVV
Trigger: AACAACAGAGCTCTGGTCTCATCTGTTGTTTGTTTC...GCAGTTTTTGTGGTTCGGGACTGTGTTTGCCATGTTGTAGTAACAACCACTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR GCA 90 bp TACTACAACATGGCAAACACAGTCCCGAACCACAAAAACTGCCAGTGTGTACTACAAACAGCAACAGCATaGTGTAGCTTAAAGCCCACT +
Preference number: 4 (lower is better)
Translates to: YYNMANTVPNHKNCQCVLQTATA*CSLKPT
Trigger: AGTGGGCTTTAAGCTACAGCATGCTGTTGCTGTTTG...TAGTACACACTGGCAGTTTTTGTGGTTCGGGACTGTGTTTGCCATGTTGTAGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR GCA 90 bp AACATGTGCAGTGTTGAAGCCATAGCATCCTTTCCTAAGAACTCATCATTGGGTAGGAACTGCGCAGTCTaGTACAACACAGTGAACTTC +
Preference number: 4 (lower is better)
Translates to: NMCSVEAIASFPKNSSLGRNCAV*YNTVNF
Trigger: GAAGTTCACTGTGTTGTAGCAGACTGCGCAGTTCCT...ACCCAATGATGAGTTCTTAGGAAAGGATGCTATGGCTTCAACACTGCACATGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312504.10
CDS-3UTR GCA 90 bp GCTGCAAATTGGTGTTCTAAGGGAAGGTGGCTTGATGCTCTTCCTCGGGATGGTATTACAGGAGAACAATaGCATGTACAATGTACAGAA +
Preference number: 4 (lower is better)
Translates to: AANWCSKGRWLDALPRDGITGEQ*HVQCTE
Trigger: TTCTGTACATTGTACATGGCATTGTTCTCCTGTAAT...ACCATCCCGAGGAAGAGCATCAAGCCACCTTCCCTTAGAACACCAATTTGCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR GCA 90 bp TTTTGTTCCAGCAATCCAGTCGTCAAGTCACCATCAAGCATTGGTAAATACAAACTTGATGACAGCAGATaGTTCCAGGGAGGAGAGGCT +
Preference number: 4 (lower is better)
Translates to: FCSSNPVVKSPSSIGKYKLDDSR*FQGGEA
Trigger: AGCCTCTCCTCCCTGGAAGCATCTGCTGTCATCAAG...TTTGTATTTACCAATGCTTGATGGTGACTTGACGACTGGATTGCTGGAACAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CCA 90 bp AAATCCCTCTCTCTAGCTGGTTATCAGAGGCCACAGAACAGCCTGCTTTCTGCACACTTTAGTACACTTTaGGTGAATTTTAGGGCATTC +
Preference number: 4 (lower is better)
Translates to: KSLSLAGYQRPQNSLLSAHFSTL*VNFRAF
Trigger: GAATGCCCTAAAATTCACCCAAAGTGTACTAAAGTG...TGCAGAAAGCAGGCTGTTCTGTGGCCTCTGATAACCAGCTAGAGAGAGGGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CCA 90 bp GATGGTGCTAAACATCCTAAAAGCACACAGGACAGCCCCCACCAACGAATAATGTTCTCACCCTGGTTCTaGTATTTATATTGCCTGATG +
Preference number: 4 (lower is better)
Translates to: DGAKHPKSTQDSPHQRIMFSPWF*YLYCLM
Trigger: CATCAGGCAATATAAATACCAGAACCAGGGTGAGAA...CATTATTCGTTGGTGGGGGCTGTCCTGTGTGCTTTTAGGATGTTTAGCACCATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CCA 90 bp TACTACAACATGGCAAACACAGTCCCGAACCACAAAAACTGCCAGTGTGTACTAGTTGTTACTACAACATaGCAAACACAGTCCCGAACC +
Preference number: 4 (lower is better)
Translates to: YYNMANTVPNHKNCQCVLVVTTT*QTQSRT
Trigger: GGTTCGGGACTGTGTTTGCCATGTTGTAGTAACAAC...TAGTACACACTGGCAGTTTTTGTGGTTCGGGACTGTGTTTGCCATGTTGTAGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CCA 90 bp TTCAGAATTGTTAATTTTGCACTTGAATCGAGGTGGCATCAGATACCCTGTGTGGCACTTGAATCGAGGTaGCATCAGATACCCTGTGTG +
Preference number: 4 (lower is better)
Translates to: FRIVNFALESRWHQIPCVALESR*HQIPCV
Trigger: CACACAGGGTATCTGATGCCACCTCGATTCAAGTGC...CACACAGGGTATCTGATGCCACCTCGATTCAAGTGCAAAATTAACAATTCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CCA 90 bp TTTGGATTCACAGTGGGTTTTCTCACCCTGGTTCTGGTATTTATATTGCCTGATAAGCCTCACTCTCTATaGAGAAGACTGACCCCTTGG +
Preference number: 4 (lower is better)
Translates to: FGFTVGFLTLVLVFILPDKPHSL*RRLTPW
Trigger: CCAAGGGGTCAGTCTTCTCCATAGAGAGTGAGGCTT...ATCAGGCAATATAAATACCAGAACCAGGGTGAGAAAACCCACTGTGAATCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CCA 90 bp GATGGTGCTAAACATCCTAAAAGCACACAGGACAGCCCCCACCAACGAATAATGTATATGATGTATCCATaGTGGCAAATGAAAGGCACC +
Preference number: 4 (lower is better)
Translates to: DGAKHPKSTQDSPHQRIMYMMYP*WQMKGT
Trigger: GGTGCCTTTCATTTGCCACCATGGATACATCATATA...CATTATTCGTTGGTGGGGGCTGTCCTGTGTGCTTTTAGGATGTTTAGCACCATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CCA 90 bp GCTGCAAATTGGTGTTCTAAGGGAAGGTGGCTTGATGCTCTTCCTCGGGATGGTAATTTCTCAATGACCTaGGTAGAAGGAAGTTGTAAA +
Preference number: 4 (lower is better)
Translates to: AANWCSKGRWLDALPRDGNFSMT*VEGSCK
Trigger: TTTACAACTTCCTTCTACCCAGGTCATTGAGAAATT...ACCATCCCGAGGAAGAGCATCAAGCCACCTTCCCTTAGAACACCAATTTGCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR TCA 90 bp CCAGCAATCCAGTCGTCAAGTCACCATCAAGCATTGGTAAATACAAAAGCGATTAAACATGTGCAGTGTTaGAGCCATAGCATCCTTTCC +
Preference number: 4 (lower is better)
Translates to: PAIQSSSHHQALVNTKAIKHVQC*SHSILS
Trigger: GGAAAGGATGCTATGGCTTCAACACTGCACATGTTT...AATCGCTTTTGTATTTACCAATGCTTGATGGTGACTTGACGACTGGATTGCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR TCA 90 bp ATGAAAGGCACCAACCTTGCTGCAAATTGGTGTTCTAAGGGAAGGTGGCTTGATACTTTTAGCCAAATCTaGACTCAAAAGCCAGAGATG +
Preference number: 4 (lower is better)
Translates to: MKGTNLAANWCSKGRWLDTFSQI*TQKPEM
Trigger: CATCTCTGGCTTTTGAGTTCAGATTTGGCTAAAAGT...ATCAAGCCACCTTCCCTTAGAACACCAATTTGCAGCAAGGTTGGTGCCTTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR TCA 90 bp ATTGTTAATTTTGCACTTGAATCGAGGTGGCATCAGATACCCTGTGTGTTTTGTCTCTATGGAGAAGACTaGCCCCTTGGAAATGCTGAC +
Preference number: 4 (lower is better)
Translates to: IVNFALESRWHQIPCVFCLYGED*PLGNAD
Trigger: GTCAGCATTTCCAAGGGGTCAGTCTTCTCCATAGAG...ACAAAACACACAGGGTATCTGATGCCACCTCGATTCAAGTGCAAAATTAACAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR GCA 90 bp CCAGCAATCCAGTCGTCAAGTCACCATCAAGCATTGGTAAATACAAAAGCGATTCCACTTTCACTTCAATaGCAGCTGGAATTATCGTCG +
Preference number: 4 (lower is better)
Translates to: PAIQSSSHHQALVNTKAIPLSLQ*QLELSS
Trigger: CGACGATAATTCCAGCTGGCATTGAAGTGAAAGTGG...AATCGCTTTTGTATTTACCAATGCTTGATGGTGACTTGACGACTGGATTGCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR GCA 90 bp CCTACTGTGTCCCCTGCCAGAAACCACTCTATACTGATTATTCTAGACCACTGGAATGGAATTGTATTGTaGAAGACTCACTCTACCCTA +
Preference number: 4 (lower is better)
Translates to: PTVSPARNHSILIILDHWNGIVL*KTHSTL
Trigger: TAGGGTAGAGTGAGTCTTGCACAATACAATTCCATT...CCAGTGGTCTAGAATAATCAGTATAGAGTGGTTTCTGGCAGGGGACACAGTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR GCA 90 bp ATAAGAATGTCAGGTCTGACTCGTCAGCACGTTAATTTTGGAAATGACAACTCTTCTTCCTCGGGATGGTaGCGGCATGGCTATTTGTAT +
Preference number: 4 (lower is better)
Translates to: IRMSGLTRQHVNFGNDNSSSSGW*RHGYLY
Trigger: ATACAAATAGCCATGCCGGCACCATCCCGAGGAAGA...AGAGTTGTCATTTCCAAAATTAACGTGCTGACGAGTCAGACCTGACATTCTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR GCA 90 bp CTTGATGCTCTTCCTCGGGATGGTGCCGGCATGGCTATTTGTATCATAACGCAATTAAAGGAAACAGCCTaGAGTGAAACTTTGAGAAAA +
Preference number: 4 (lower is better)
Translates to: LDALPRDGAGMAICIITQLKETA*SETLRK
Trigger: TTTTCTCAAAGTTTCACTGCAGGCTGTTTCCTTTAA...TTGCGTTATGATACAAATAGCCATGCCGGCACCATCCCGAGGAAGAGCATCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CCA 90 bp GAGATGTTCATAAGGATTTGGATTCACAGTGGGTTTTCTCACCCTGGTTCTGGTGAACTCATCATTGGGTaGAAGTTTGTCCTACACAGT +
Preference number: 4 (lower is better)
Translates to: EMFIRIWIHSGFSHPGSGELIIG*KFVLHS
Trigger: ACTGTGTAGGACAAACTTCCACCCAATGATGAGTTC...ACCAGAACCAGGGTGAGAAAACCCACTGTGAATCCAAATCCTTATGAACATCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CCA 90 bp CCAGCAATCCAGTCGTCAAGTCACCATCAAGCATTGGTAAATACAAAAGCGATTGATTTGGATTCACAGTaGGTTTTCTCACCCTGGTTC +
Preference number: 4 (lower is better)
Translates to: PAIQSSSHHQALVNTKAIDLDSQ*VFSPWF
Trigger: GAACCAGGGTGAGAAAACCCACTGTGAATCCAAATC...AATCGCTTTTGTATTTACCAATGCTTGATGGTGACTTGACGACTGGATTGCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CCA 90 bp GCACCAACCTTGCTGCAAATTGGTGTTCTAAGGGAAGGTGGCTTGATGCTCTTCATGTTCATAAGGATTTaGATTCACAGTGGGTTTTCT +
Preference number: 4 (lower is better)
Translates to: APTLLQIGVLREGGLMLFMFIRI*IHSGFS
Trigger: AGAAAACCCACTGTGAATCCAAATCCTTATGAACAT...GAAGAGCATCAAGCCACCTTCCCTTAGAACACCAATTTGCAGCAAGGTTGGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CCA 90 bp GATTCACAGTGGGTTTTCTCACCCTGGTTCTGGTATTTATATTGCCTGATGACAGTTGTTACTACAACATaGCAAACACAGTCCCGAACC +
Preference number: 4 (lower is better)
Translates to: DSQWVFSPWFWYLYCLMTVVTTT*QTQSRT
Trigger: GGTTCGGGACTGTGTTTGCCATGTTGTAGTAACAAC...TGTCATCAGGCAATATAAATACCAGAACCAGGGTGAGAAAACCCACTGTGAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CCA 90 bp GATTCACAGTGGGTTTTCTCACCCTGGTTCTGGTATTTATATTGCCTGATGACAAGACATAGGGCTGAGTaGTTGTTACTACAACATGGC +
Preference number: 4 (lower is better)
Translates to: DSQWVFSPWFWYLYCLMTRHRAE*LLLQHG
Trigger: GCCATGTTGTAGTAACAACCACTCAGCCCTATGTCT...TGTCATCAGGCAATATAAATACCAGAACCAGGGTGAGAAAACCCACTGTGAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CCA 90 bp CCAGCAATCCAGTCGTCAAGTCACCATCAAGCATTGGTAAATACAAAAGCGATTAATCAGCACTTGAGGTaGAAAGGGTGTCCTGAATCT +
Preference number: 4 (lower is better)
Translates to: PAIQSSSHHQALVNTKAINQHLR*KGCPES
Trigger: AGATTCAGGACACCCTTTCCACCTCAAGTGCTGATT...AATCGCTTTTGTATTTACCAATGCTTGATGGTGACTTGACGACTGGATTGCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CCA 90 bp ATTGTTAATTTTGCACTTGAATCGAGGTGGCATCAGATACCCTGTGTGTTTTGTTGTTCTAAGGGAAGGTaGCTTGATGCTCTTCCTCGG +
Preference number: 4 (lower is better)
Translates to: IVNFALESRWHQIPCVFCCSKGR*LDALPR
Trigger: CCGAGGAAGAGCATCAAGCCACCTTCCCTTAGAACA...ACAAAACACACAGGGTATCTGATGCCACCTCGATTCAAGTGCAAAATTAACAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR TCA 90 bp AGAAAGCTCTATAATACATCTCTGTCTAGACATAAGCTAAAGTGTGGAATTCCTCCAACAACTGGCTTCTaGGCCCAGCTCTGTCGAAAT +
Preference number: 4 (lower is better)
Translates to: RKLYNTSLSRHKLKCGIPPTTGF*AQLCRN
Trigger: ATTTCGACAGAGCTGGGCTCAGAAGCCAGTTGTTGG...AGGAATTCCACACTTTAGCTTATGTCTAGACAGAGATGTATTATAGAGCTTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR TCA 90 bp GAGATGTTCATAAGGATTTGGATTCACAGTGGGTTTTCTCACCCTGGTTCTGGTTTAGTACACTTTGGGTaGATTTTAGGGCATTCTGGT +
Preference number: 4 (lower is better)
Translates to: EMFIRIWIHSGFSHPGSGLVHFG*ILGHSG
Trigger: ACCAGAATGCCCTAAAATTCACCCAAAGTGTACTAA...ACCAGAACCAGGGTGAGAAAACCCACTGTGAATCCAAATCCTTATGAACATCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR TCA 90 bp ATTGTTAATTTTGCACTTGAATCGAGGTGGCATCAGATACCCTGTGTGTTTTGTAGTAAATTCTTGCTGTaGCTCTCGCTGTGCCAATGC +
Preference number: 4 (lower is better)
Translates to: IVNFALESRWHQIPCVFCSKFLL*LSLCQC
Trigger: GCATTGGCACAGCGAGAGTCACAGCAAGAATTTACT...ACAAAACACACAGGGTATCTGATGCCACCTCGATTCAAGTGCAAAATTAACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR GCA 90 bp ATGTCAGGTCTGACTCGTCAGCACGTTAATTTTGGAAATGACAACTCTTTCTTGCACTTACACAGTGTTTaGTACGGCAGTAGAGGTGAT +
Preference number: 4 (lower is better)
Translates to: MSGLTRQHVNFGNDNSFLHLHSV*YGSRGD
Trigger: ATCACCTCTACTGCCGTAGCAAACACTGTGTAAGTG...CAAGAAAGAGTTGTCATTTCCAAAATTAACGTGCTGACGAGTCAGACCTGACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR GCA 90 bp TCGGGGCAAAGAAAGCTCTATAATACATCTCTGTCTAGACATAAGCTAAAGTGTTTGTCCTACACAGTCTaGTTGCCTTGGCATTCACGT +
Preference number: 4 (lower is better)
Translates to: SGQRKLYNTSLSRHKLKCLSYTV*LPWHSR
Trigger: ACGTGAATGCCAAGGCAAGCAGACTGTGTAGGACAA...ACACTTTAGCTTATGTCTAGACAGAGATGTATTATAGAGCTTTCTTTGCCCCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR GCA 90 bp TTCAGAATTGTTAATTTTGCACTTGAATCGAGGTGGCATCAGATACCCTGTGTGCAGGGAAGGAGCCTGTaGAAGGCTATTTCTTTCTTT +
Preference number: 4 (lower is better)
Translates to: FRIVNFALESRWHQIPCVQGRSL*KAISFF
Trigger: AAAGAAAGAAATAGCCTTGCACAGGCTCCTTCCCTG...CACACAGGGTATCTGATGCCACCTCGATTCAAGTGCAAAATTAACAATTCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR GCA 90 bp GTCTATATGATGTATCCATGGTGGCAAATGAAAGGCACCAACCTTGCTGCAAATAAGATTGAGACACCTTaGTCTAGAATATGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: VYMMYPWWQMKGTNLAANKIETP*SRIWLS
Trigger: GGAGAGCCATATTCTAGAGCAAGGTGTCTCAATCTT...ATTTGCAGCAAGGTTGGTGCCTTTCATTTGCCACCATGGATACATCATATAGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CCA 90 bp ATAAGAATGTCAGGTCTGACTCGTCAGCACGTTAATTTTGGAAATGACAACTCTTTAGGGCATTCTGGTTaGTCGCAAACAGGTCCATCT +
Preference number: 4 (lower is better)
Translates to: IRMSGLTRQHVNFGNDNSLGHSG*SQTGPS
Trigger: AGATGGACCTGTTTGCGACCAACCAGAATGCCCTAA...AGAGTTGTCATTTCCAAAATTAACGTGCTGACGAGTCAGACCTGACATTCTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CCA 90 bp ATAAGAATGTCAGGTCTGACTCGTCAGCACGTTAATTTTGGAAATGACAACTCTAGTGAACTTCATTGCTaGGCTCACAGCGACACCATT +
Preference number: 4 (lower is better)
Translates to: IRMSGLTRQHVNFGNDNSSELHC*AHSDTI
Trigger: AATGGTGTCGCTGTGAGCCCAGCAATGAAGTTCACT...AGAGTTGTCATTTCCAAAATTAACGTGCTGACGAGTCAGACCTGACATTCTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312504.10
CDS-3UTR CCA 90 bp AACATGTGCAGTGTTGAAGCCATAGCATCCTTTCCTAAGAACTCATCATTGGGTAGGACAACATTGTTCTaGTTCATAGACTGGGTTGAC +
Preference number: 4 (lower is better)
Translates to: NMCSVEAIASFPKNSSLGRTTLF*FIDWVD
Trigger: GTCAACCCAGTCTATGAACCAGAACAATGTTGTCCT...ACCCAATGATGAGTTCTTAGGAAAGGATGCTATGGCTTCAACACTGCACATGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312504.10
CDS-3UTR CCA 90 bp TTTGGATTCACAGTGGGTTTTCTCACCCTGGTTCTGGTATTTATATTGCCTGATTCCTGCAAAGCAGTTTaGACCATTTTTGCAGACAGG +
Preference number: 4 (lower is better)
Translates to: FGFTVGFLTLVLVFILPDSCKAV*TIFADR
Trigger: CCTGTCTGCAAAAATGGTCCAAACTGCTTTGCAGGA...ATCAGGCAATATAAATACCAGAACCAGGGTGAGAAAACCCACTGTGAATCCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312504.10
CDS-3UTR CCA 90 bp ATTGTTAATTTTGCACTTGAATCGAGGTGGCATCAGATACCCTGTGTGTTTTGTCACTTCAATGCCAGCTaGAATTATCGTCGTTCCTGC +
Preference number: 4 (lower is better)
Translates to: IVNFALESRWHQIPCVFCHFNAS*NYRRSC
Trigger: GCAGGAACGACGATAATTCCAGCTGGCATTGAAGTG...ACAAAACACACAGGGTATCTGATGCCACCTCGATTCAAGTGCAAAATTAACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CCA 90 bp ATAAGAATGTCAGGTCTGACTCGTCAGCACGTTAATTTTGGAAATGACAACTCTAGGGGAGCAATTGACTaGATGCTCTTGTGTTTCCCA +
Preference number: 4 (lower is better)
Translates to: IRMSGLTRQHVNFGNDNSRGAID*MLLCFP
Trigger: TGGGAAACACAAGAGCATCCAGTCAATTGCTCCCCT...AGAGTTGTCATTTCCAAAATTAACGTGCTGACGAGTCAGACCTGACATTCTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CCA 90 bp ATAAGAATGTCAGGTCTGACTCGTCAGCACGTTAATTTTGGAAATGACAACTCTCCTTGCTCTAGAATATaGCTCTCCACAGGAGCTATG +
Preference number: 4 (lower is better)
Translates to: IRMSGLTRQHVNFGNDNSPCSRI*LSTGAM
Trigger: CATAGCTCCTGTGGAGAGCCATATTCTAGAGCAAGG...AGAGTTGTCATTTCCAAAATTAACGTGCTGACGAGTCAGACCTGACATTCTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CCA 90 bp TTGCCTGATGACAGTGAGTTTAGAGTGTGTTTAGCTACAAACCAAACTCAAATTTGTTCTAAGGGAAGGTaGCTTGATGCTCTTCCTCGG +
Preference number: 4 (lower is better)
Translates to: LPDDSEFRVCLATNQTQICSKGR*LDALPR
Trigger: CCGAGGAAGAGCATCAAGCCACCTTCCCTTAGAACA...AATTTGAGTTTGGTTTGTAGCTAAACACACTCTAAACTCACTGTCATCAGGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CCA 90 bp GATTCACAGTGGGTTTTCTCACCCTGGTTCTGGTATTTATATTGCCTGATGACAATGATGTATCCATGGTaGCAAATGAAAGGCACCAAC +
Preference number: 4 (lower is better)
Translates to: DSQWVFSPWFWYLYCLMTMMYPW*QMKGTN
Trigger: GTTGGTGCCTTTCATTTGCCACCATGGATACATCAT...TGTCATCAGGCAATATAAATACCAGAACCAGGGTGAGAAAACCCACTGTGAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
3UTR CAA 72 bp ACAGTGGGTTTTCTCACCCTGGTTCTGGTATTTATATaGCCTGATGACAGTGAGTTTAGAGTGTGTTTAGCT +
Preference number: 4 (lower is better)
Translates to: TVGFLTLVLVFI*PDDSEFRVCLA
Trigger: AGCTAAACACACTCTAAACTCACTGTCATCAGGCAATATAAATACCAGAACCAGGGTGAGAAAACCCACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR TCA 90 bp ATAAGAATGTCAGGTCTGACTCGTCAGCACGTTAATTTTGGAAATGACAACTCTGGTCACAGCCCAAAATaGACTAAAAGGTCAGGTATG +
Preference number: 4 (lower is better)
Translates to: IRMSGLTRQHVNFGNDNSGHSPK*TKRSGM
Trigger: CATACCTGACCTTTTAGTTCATTTTGGGCTGTGACC...AGAGTTGTCATTTCCAAAATTAACGTGCTGACGAGTCAGACCTGACATTCTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR TCA 90 bp ATAAGAATGTCAGGTCTGACTCGTCAGCACGTTAATTTTGGAAATGACAACTCTAAACATGTGCAGTGTTaGAGCCATAGCATCCTTTCC +
Preference number: 4 (lower is better)
Translates to: IRMSGLTRQHVNFGNDNSKHVQC*SHSILS
Trigger: GGAAAGGATGCTATGGCTTCAACACTGCACATGTTT...AGAGTTGTCATTTCCAAAATTAACGTGCTGACGAGTCAGACCTGACATTCTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR TCA 90 bp AACATGTGCAGTGTTGAAGCCATAGCATCCTTTCCTAAGAACTCATCATTGGGTATGCAGCATTGCTCATaGATGATTCATGACTGTCTA +
Preference number: 4 (lower is better)
Translates to: NMCSVEAIASFPKNSSLGMQHCS*MIHDCL
Trigger: TAGACAGTCATGAATCATTCATGAGCAATGCTGCAT...ACCCAATGATGAGTTCTTAGGAAAGGATGCTATGGCTTCAACACTGCACATGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR TCA 90 bp GATTCACAGTGGGTTTTCTCACCCTGGTTCTGGTATTTATATTGCCTGATGACATTTCTGCAAACTCTCTaGAGAGAGATCCTTAATGGA +
Preference number: 4 (lower is better)
Translates to: DSQWVFSPWFWYLYCLMTFLQTL*REILNG
Trigger: TCCATTAAGGATCTCTCTTCAGAGAGTTTGCAGAAA...TGTCATCAGGCAATATAAATACCAGAACCAGGGTGAGAAAACCCACTGTGAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR TCA 90 bp CCAGCAATCCAGTCGTCAAGTCACCATCAAGCATTGGTAAATACAAAAGCGATTGGAAACAGCCTGCAGTaGAACTTTGAGAAAAAGAAA +
Preference number: 4 (lower is better)
Translates to: PAIQSSSHHQALVNTKAIGNSLQ*NFEKKK
Trigger: TTTCTTTTTCTCAAAGTTTCACTGCAGGCTGTTTCC...AATCGCTTTTGTATTTACCAATGCTTGATGGTGACTTGACGACTGGATTGCTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR GCA 90 bp TACTACAACATGGCAAACACAGTCCCGAACCACAAAAACTGCCAGTGTGTACTAAGTTTGGACCATTTTTaGAGACAGGACAACATTGTT +
Preference number: 4 (lower is better)
Translates to: YYNMANTVPNHKNCQCVLSLDHF*RQDNIV
Trigger: AACAATGTTGTCCTGTCTGCAAAAATGGTCCAAACT...TAGTACACACTGGCAGTTTTTGTGGTTCGGGACTGTGTTTGCCATGTTGTAGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000312504.10
CDS-3UTR GCA 90 bp TTTTGTTCCAGCAATCCAGTCGTCAAGTCACCATCAAGCATTGGTAAATACAAACCACTTTCACTTCAATaGCAGCTGGAATTATCGTCG +
Preference number: 4 (lower is better)
Translates to: FCSSNPVVKSPSSIGKYKPLSLQ*QLELSS
Trigger: CGACGATAATTCCAGCTGGCATTGAAGTGAAAGTGG...TTTGTATTTACCAATGCTTGATGGTGACTTGACGACTGGATTGCTGGAACAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR GCA 90 bp CATGGCAAACACAGTCCCGAACCACAAAAACTGCCAGTGTGTACTACTGACTTTATTACAGGAGAACAATaGCATGTACAATGTACAGAA +
Preference number: 4 (lower is better)
Translates to: HGKHSPEPQKLPVCTTDFITGEQ*HVQCTE
Trigger: TTCTGTACATTGTACATGGCATTGTTCTCCTGTAAT...AAAGTCAGTAGTACACACTGGCAGTTTTTGTGGTTCGGGACTGTGTTTGCCATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR GCA 90 bp ATTGTTAATTTTGCACTTGAATCGAGGTGGCATCAGATACCCTGTGTGTTTTGTCCGAACCACAAAAACTaGCAGTGTGTACTACTGACT +
Preference number: 4 (lower is better)
Translates to: IVNFALESRWHQIPCVFCPNHKN*QCVLLT
Trigger: AGTCAGTAGTACACACTGGCAGTTTTTGTGGTTCGG...ACAAAACACACAGGGTATCTGATGCCACCTCGATTCAAGTGCAAAATTAACAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR GCA 90 bp ATAAGAATGTCAGGTCTGACTCGTCAGCACGTTAATTTTGGAAATGACAACTCTAACGCAAGCACAGTGTaGATAAGAATGTCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: IRMSGLTRQHVNFGNDNSNASTV*IRMSGL
Trigger: CAGACCTGACATTCTTATGCACACTGTGCTTGCGTT...AGAGTTGTCATTTCCAAAATTAACGTGCTGACGAGTCAGACCTGACATTCTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR GCA 90 bp ATGAAAGGCACCAACCTTGCTGCAAATTGGTGTTCTAAGGGAAGGTGGCTTGATGATAAGGTACTATGCTaGATGGCTCTATTAATGATA +
Preference number: 4 (lower is better)
Translates to: MKGTNLAANWCSKGRWLDDKVLC*MALLMI
Trigger: TATCATTAATAGAGCCATGCAGCATAGTACCTTATC...ATCAAGCCACCTTCCCTTAGAACACCAATTTGCAGCAAGGTTGGTGCCTTTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR GCA 90 bp GTCTATATGATGTATCCATGGTGGCAAATGAAAGGCACCAACCTTGCTGCAAATAATTATCGTCGTTCCTaGAAAGCAGTTTGGACCTTA +
Preference number: 4 (lower is better)
Translates to: VYMMYPWWQMKGTNLAANNYRRS*KAVWTL
Trigger: TAAGGTCCAAACTGCTTTGCAGGAACGACGATAATT...ATTTGCAGCAAGGTTGGTGCCTTTCATTTGCCACCATGGATACATCATATAGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427124.1
CDS-3UTR CCA 90 bp ATTGTTAATTTTGCACTTGAATCGAGGTGGCATCAGATACCCTGTGTGTTTTGTTCATTACTGGAGATCTaGTCACCTTCATCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: IVNFALESRWHQIPCVFCSLLEI*SPSSAG
Trigger: TCCTGCTGATGAAGGTGACCAGATCTCCAGTAATGA...ACAAAACACACAGGGTATCTGATGCCACCTCGATTCAAGTGCAAAATTAACAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CCA 90 bp GATTCACAGTGGGTTTTCTCACCCTGGTTCTGGTATTTATATTGCCTGATGACATCAGATTGTCATTACTaGAGATCTGGTCACCTTCAT +
Preference number: 4 (lower is better)
Translates to: DSQWVFSPWFWYLYCLMTSDCHY*RSGHLH
Trigger: ATGAAGGTGACCAGATCTCCAGTAATGACAATCTGA...TGTCATCAGGCAATATAAATACCAGAACCAGGGTGAGAAAACCCACTGTGAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CCA 90 bp AACATGTGCAGTGTTGAAGCCATAGCATCCTTTCCTAAGAACTCATCATTGGGTTCAGATTGTCATTACTaGAGATCTGGTCACCTTCAT +
Preference number: 4 (lower is better)
Translates to: NMCSVEAIASFPKNSSLGSDCHY*RSGHLH
Trigger: ATGAAGGTGACCAGATCTCCAGTAATGACAATCTGA...ACCCAATGATGAGTTCTTAGGAAAGGATGCTATGGCTTCAACACTGCACATGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR TCA 90 bp TCGGGGCAAAGAAAGCTCTATAATACATCTCTGTCTAGACATAAGCTAAAGTGTGCCAGTGTGTACTACTaGCTTTTAGCCAAATCTGAA +
Preference number: 4 (lower is better)
Translates to: SGQRKLYNTSLSRHKLKCASVYY*LLAKSE
Trigger: TTCAGATTTGGCTAAAAGTCAGTAGTACACACTGGC...ACACTTTAGCTTATGTCTAGACAGAGATGTATTATAGAGCTTTCTTTGCCCCGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR TCA 90 bp TTTGGATTCACAGTGGGTTTTCTCACCCTGGTTCTGGTATTTATATTGCCTGATTTTCTGCAAACTCTCTaGAGAGAGATCCTTAATGGA +
Preference number: 4 (lower is better)
Translates to: FGFTVGFLTLVLVFILPDFLQTL*REILNG
Trigger: TCCATTAAGGATCTCTCTTCAGAGAGTTTGCAGAAA...ATCAGGCAATATAAATACCAGAACCAGGGTGAGAAAACCCACTGTGAATCCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR GCA 90 bp TTTGGATTCACAGTGGGTTTTCTCACCCTGGTTCTGGTATTTATATTGCCTGATAATTATCGTCGTTCCTaGAAAGCAGTTTGGACCATT +
Preference number: 4 (lower is better)
Translates to: FGFTVGFLTLVLVFILPDNYRRS*KAVWTI
Trigger: AATGGTCCAAACTGCTTTGCAGGAACGACGATAATT...ATCAGGCAATATAAATACCAGAACCAGGGTGAGAAAACCCACTGTGAATCCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312504.10
CDS-3UTR GCA 90 bp AACATGTGCAGTGTTGAAGCCATAGCATCCTTTCCTAAGAACTCATCATTGGGTAATGGAATTGTATTGTaGAAGACTCACTCTACCCTA +
Preference number: 4 (lower is better)
Translates to: NMCSVEAIASFPKNSSLGNGIVL*KTHSTL
Trigger: TAGGGTAGAGTGAGTCTTGCACAATACAATTCCATT...ACCCAATGATGAGTTCTTAGGAAAGGATGCTATGGCTTCAACACTGCACATGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CCA 90 bp ATTGTTAATTTTGCACTTGAATCGAGGTGGCATCAGATACCCTGTGTGTTTTGTGAACTCATCATTGGGTaGAAGTTTGTCCTACACAGT +
Preference number: 4 (lower is better)
Translates to: IVNFALESRWHQIPCVFCELIIG*KFVLHS
Trigger: ACTGTGTAGGACAAACTTCCACCCAATGATGAGTTC...ACAAAACACACAGGGTATCTGATGCCACCTCGATTCAAGTGCAAAATTAACAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CCA 90 bp GAGATGTTCATAAGGATTTGGATTCACAGTGGGTTTTCTCACCCTGGTTCTGGTATGTTCATAAGGATTTaGATTCACAGTGGGTTTTCT +
Preference number: 4 (lower is better)
Translates to: EMFIRIWIHSGFSHPGSGMFIRI*IHSGFS
Trigger: AGAAAACCCACTGTGAATCCAAATCCTTATGAACAT...ACCAGAACCAGGGTGAGAAAACCCACTGTGAATCCAAATCCTTATGAACATCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CCA 90 bp TTCAGAATTGTTAATTTTGCACTTGAATCGAGGTGGCATCAGATACCCTGTGTGACATTAGGCAATGTCTaGAGAAATTTGGTTGTCACC +
Preference number: 4 (lower is better)
Translates to: FRIVNFALESRWHQIPCVTLGNV*RNLVVT
Trigger: GGTGACAACCAAATTTCTCCAGACATTGCCTAATGT...CACACAGGGTATCTGATGCCACCTCGATTCAAGTGCAAAATTAACAATTCTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CCA 90 bp TCGGGGCAAAGAAAGCTCTATAATACATCTCTGTCTAGACATAAGCTAAAGTGTTCCTGCAAAGCAGTTTaGACCTTAAATTCCTCCAAG +
Preference number: 4 (lower is better)
Translates to: SGQRKLYNTSLSRHKLKCSCKAV*TLNSSK
Trigger: CTTGGAGGAATTTAAGGTCCAAACTGCTTTGCAGGA...ACACTTTAGCTTATGTCTAGACAGAGATGTATTATAGAGCTTTCTTTGCCCCGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427124.1
3UTR CAA 72 bp ACTCACTCTACCCTAATCTTTAATTTAAATCAGCACTaGAGGTGGAAAGGGTGTCCTGAATCTGTGTTTCAG +
Preference number: 4 (lower is better)
Translates to: THSTLIFNLNQH*RWKGCPESVFQ
Trigger: CTGAAACACAGATTCAGGACACCCTTTCCACCTCAAGTGCTGATTTAAATTAAAGATTAGGGTAGAGTGAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR TCA 90 bp TTTTGTTCCAGCAATCCAGTCGTCAAGTCACCATCAAGCATTGGTAAATACAAATTAGTACACTTTGGGTaGATTTTAGGGCATTCTGGT +
Preference number: 4 (lower is better)
Translates to: FCSSNPVVKSPSSIGKYKLVHFG*ILGHSG
Trigger: ACCAGAATGCCCTAAAATTCACCCAAAGTGTACTAA...TTTGTATTTACCAATGCTTGATGGTGACTTGACGACTGGATTGCTGGAACAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR TCA 90 bp ATGTCAGGTCTGACTCGTCAGCACGTTAATTTTGGAAATGACAACTCTTTCTTGTCGAGGTTTTCCATATaGAATGTGTGGTTTGTAAGA +
Preference number: 4 (lower is better)
Translates to: MSGLTRQHVNFGNDNSFLSRFSI*NVWFVR
Trigger: TCTTACAAACCACACATTTCATATGGAAAACCTCGA...CAAGAAAGAGTTGTCATTTCCAAAATTAACGTGCTGACGAGTCAGACCTGACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR TCA 90 bp ATAAGAATGTCAGGTCTGACTCGTCAGCACGTTAATTTTGGAAATGACAACTCTTCGAGGTTTTCCATATaGAATGTGTGGTTTGTAAGA +
Preference number: 4 (lower is better)
Translates to: IRMSGLTRQHVNFGNDNSSRFSI*NVWFVR
Trigger: TCTTACAAACCACACATTTCATATGGAAAACCTCGA...AGAGTTGTCATTTCCAAAATTAACGTGCTGACGAGTCAGACCTGACATTCTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR GCA 90 bp TTTGGATTCACAGTGGGTTTTCTCACCCTGGTTCTGGTATTTATATTGCCTGATATAGATAAGGTACTATaGTGCATGGCTCTATTAATG +
Preference number: 4 (lower is better)
Translates to: FGFTVGFLTLVLVFILPDIDKVL*CMALLM
Trigger: CATTAATAGAGCCATGCAGCATAGTACCTTATCTAT...ATCAGGCAATATAAATACCAGAACCAGGGTGAGAAAACCCACTGTGAATCCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CCA 90 bp TTGCCTGATGACAGTGAGTTTAGAGTGTGTTTAGCTACAAACCAAACTCAAATTCTAAGAACTCATCATTaGGTGGAAGTTTGTCCTACA +
Preference number: 4 (lower is better)
Translates to: LPDDSEFRVCLATNQTQILRTHH*VEVCPT
Trigger: TGTAGGACAAACTTCCACCCAATGATGAGTTCTTAG...AATTTGAGTTTGGTTTGTAGCTAAACACACTCTAAACTCACTGTCATCAGGCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
3UTR CAA 72 bp TCTAGACATAAGCTAAAGTGTGGAATTCCTTTACTTTaGAGTGCAGACATAAATCATGCAGCATTGCTCATG +
Preference number: 4 (lower is better)
Translates to: SRHKLKCGIPLL*SADINHAALLM
Trigger: CATGAGCAATGCTGCATGATTTATGTCTGCACTCAAAAGTAAAGGAATTCCACACTTTAGCTTATGTCTAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR GCA 90 bp TCGGGGCAAAGAAAGCTCTATAATACATCTCTGTCTAGACATAAGCTAAAGTGTATAGATAAGGTACTATaGTGCATGGCTCTATTAATG +
Preference number: 4 (lower is better)
Translates to: SGQRKLYNTSLSRHKLKCIDKVL*CMALLM
Trigger: CATTAATAGAGCCATGCAGCATAGTACCTTATCTAT...ACACTTTAGCTTATGTCTAGACAGAGATGTATTATAGAGCTTTCTTTGCCCCGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR GCA 90 bp AGAAAGCTCTATAATACATCTCTGTCTAGACATAAGCTAAAGTGTGGAATTCCTTTTGTGTTAAACATGTaGAGTGTTGAAGCCATAGCA +
Preference number: 4 (lower is better)
Translates to: RKLYNTSLSRHKLKCGIPFVLNM*SVEAIA
Trigger: TGCTATGGCTTCAACACTGCACATGTTTAACACAAA...AGGAATTCCACACTTTAGCTTATGTCTAGACAGAGATGTATTATAGAGCTTTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR GCA 90 bp TTGCCTGATGACAGTGAGTTTAGAGTGTGTTTAGCTACAAACCAAACTCAAATTGATAAGGTACTATGCTaGATGGCTCTATTAATGATA +
Preference number: 4 (lower is better)
Translates to: LPDDSEFRVCLATNQTQIDKVLC*MALLMI
Trigger: TATCATTAATAGAGCCATGCAGCATAGTACCTTATC...AATTTGAGTTTGGTTTGTAGCTAAACACACTCTAAACTCACTGTCATCAGGCAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS GCA 90 bp GCATCAGTAAGAGCAGTTTGCAGATTGCTGATTTGGAGCTCATTCTaGCGGCAGCCGGGAATTCCTCAGCACCACGGACAGCGCCAACAA +
Preference number: 5 (lower is better)
Translates to: ASVRAVCRLLIWSSF*RQPGIPQHHGQRQQ
Trigger: TTGTTGGCGCTGTCCGTGGTGCTGAGGAATTCCCGGCTGCCGGCAGAATGAGCTCCAAATCAGCAATCTGCAAACTGCTCTTACTGATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312504.10
ENST00000427124.1
ENST00000477752.1
CDS-3UTR CAA 90 bp CAAAGTACTTGTTCCCAACCCTGTCCAGCAATAGGCCCGTCTATGTGCCCACCCTCCTACACAGTCTGCTaGCCTTGGCATTCACGTTTC +
Preference number: 5 (lower is better)
Translates to: QSTCSQPCPAIGPSMCPPSYTVC*PWHSRF
Trigger: GAAACGTGAATGCCAAGGCAAGCAGACTGTGTAGGA...GGGTGGGCACATAGACGGGCCTATTGCTGGACAGGGTTGGGAACAAGTACTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS TCA 90 bp ACTGGGTTGACACACTCAGGAACTGCGCAGTCTGCTACAACACAGTaGACTTCATTGCTGGGCTCACAGCGACACCATTCACATGGAGAG +
Preference number: 5 (lower is better)
Translates to: TGLTHSGTAQSATTQ*TSLLGSQRHHSHGE
Trigger: CTCTCCATGTGAATGGTGTCGCTGTGAGCCCAGCAATGAAGTTCACTGTGTTGTAGCAGACTGCGCAGTTCCTGAGTGTGTCAACCCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312504.10
CDS-3UTR CAA 90 bp ATGGCTCTCCACAGGAGCTATGGCAAAGCCCAGGTTGGGGGAGCAGAAAAAGAACAGACACATGGACAGTaGGAATGCCCAGGGAAAAAT +
Preference number: 5 (lower is better)
Translates to: MALHRSYGKAQVGGAEKEQTHGQ*ECPGKN
Trigger: ATTTTTCCCTGGGCATTCCAACTGTCCATGTGTCTG...TTCTTTTTCTGCTCCCCCAACCTGGGCTTTGCCATAGCTCCTGTGGAGAGCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CAA 90 bp CTTGATGCTCTTCCTCGGGATGGTGCCGGCATGGCTATTTGTATCATAACGCAATTGCAGATTGCTGATTaGGAGCTCATTCTGCCGGCA +
Preference number: 5 (lower is better)
Translates to: LDALPRDGAGMAICIITQLQIAD*ELILPA
Trigger: TGCCGGCAGAATGAGCTCCAAATCAGCAATCTGCAA...TTGCGTTATGATACAAATAGCCATGCCGGCACCATCCCGAGGAAGAGCATCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CAA 90 bp GGAGCAATTGACTGGATGCTCTTGTGTTTCCCAGCTCGGGAAAGATATTTCCCCACCCTAGGGGAGCAATaGACTGGATGCTCTTGTGTT +
Preference number: 5 (lower is better)
Translates to: GAIDWMLLCFPARERYFPTLGEQ*TGCSCV
Trigger: AACACAAGAGCATCCAGTCAATTGCTCCCCTAGGGT...GGGGAAATATCTTTCCCGAGCTGGGAAACACAAGAGCATCCAGTCAATTGCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CAA 90 bp CAAAGTACTTGTTCCCAACCCTGTCCAGCAATAGGCCCGTCTATGTGCCCACCCAATTTAAATCAGCACTaGAGGTGGAAAGGGTGTCCT +
Preference number: 5 (lower is better)
Translates to: QSTCSQPCPAIGPSMCPPNLNQH*RWKGCP
Trigger: AGGACACCCTTTCCACCTCAAGTGCTGATTTAAATT...GGGTGGGCACATAGACGGGCCTATTGCTGGACAGGGTTGGGAACAAGTACTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CAA 90 bp CCACTGGTTCTCAACGAGGTGAAATTAGGCCCCTCACTCCCACTCCTTAGGGACAATGACAACTCTTTCTaGATGACAGCAGATGCTTCC +
Preference number: 5 (lower is better)
Translates to: PLVLNEVKLGPSLPLLRDNDNSF*MTADAS
Trigger: GGAAGCATCTGCTGTCATCAAGAAAGAGTTGTCATT...GTCCCTAAGGAGTGGGAGTGAGGGGCCTAATTTCACCTCGTTGAGAACCAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS TCA 90 bp CCACTCCGCTGGCAATACCATCACCATCGTCCACAGTGTGTTGCTTaGATCCCCTCTTACACACCGGAAAATACTAACTGTGGATGTGAA +
Preference number: 5 (lower is better)
Translates to: PLRWQYHHHRPQCVA*IPSYTPENTNCGCE
Trigger: TTCACATCCACAGTTAGTATTTTCCGGTGTGTAAGAGGGGATTCAAGCAACACACTGTGGACGATGGTGATGGTATTGCCAGCGGAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312504.10
ENST00000427124.1
ENST00000477752.1
CDS-3UTR CAA 90 bp GATGGTGCTAAACATCCTAAAAGCACACAGGACAGCCCCCACCAACGAATAATGTTGCAGATTGCTGATTaGGAGCTCATTCTGCCGGCA +
Preference number: 5 (lower is better)
Translates to: DGAKHPKSTQDSPHQRIMLQIAD*ELILPA
Trigger: TGCCGGCAGAATGAGCTCCAAATCAGCAATCTGCAA...CATTATTCGTTGGTGGGGGCTGTCCTGTGTGCTTTTAGGATGTTTAGCACCATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CAA 90 bp CTGGATGCTCTTGTGTTTCCCAGCTCGGGAAAGATATTTCCCCTGACATTCCTTTTTAGGGCATTCTGGTaGGTCGCAAACAGGTCCATC +
Preference number: 5 (lower is better)
Translates to: LDALVFPSSGKIFPLTFLFRAFW*VANRSI
Trigger: GATGGACCTGTTTGCGACCAACCAGAATGCCCTAAA...AAGGAATGTCAGGGGAAATATCTTTCCCGAGCTGGGAAACACAAGAGCATCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CAA 90 bp GGAGCAATTGACTGGATGCTCTTGTGTTTCCCAGCTCGGGAAAGATATTTCCCCGCAGACAGGACAACATaGTTCTGGTTCATAGACTGG +
Preference number: 5 (lower is better)
Translates to: GAIDWMLLCFPARERYFPADRTT*FWFIDW
Trigger: CCAGTCTATGAACCAGAACAATGTTGTCCTGTCTGC...GGGGAAATATCTTTCCCGAGCTGGGAAACACAAGAGCATCCAGTCAATTGCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312504.10
CDS-3UTR CAA 90 bp AAATCCCTCTCTCTAGCTGGTTATCAGAGGCCACAGAACAGCCTGCTTTCTGCATCATTGGGTGGAAGTTaGTCCTACACAGTCTGCTTG +
Preference number: 5 (lower is better)
Translates to: KSLSLAGYQRPQNSLLSASLGGS*SYTVCL
Trigger: CAAGCAGACTGTGTAGGACAAACTTCCACCCAATGA...TGCAGAAAGCAGGCTGTTCTGTGGCCTCTGATAACCAGCTAGAGAGAGGGATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CAA 90 bp GCTGCAAATTGGTGTTCTAAGGGAAGGTGGCTTGATGCTCTTCCTCGGGATGGTCATAGGGCTGAGTGGTaGTTACTACAACATGGCAAA +
Preference number: 5 (lower is better)
Translates to: AANWCSKGRWLDALPRDGHRAEW*LLQHGK
Trigger: TTTGCCATGTTGTAGTAACAACCACTCAGCCCTATG...ACCATCCCGAGGAAGAGCATCAAGCCACCTTCCCTTAGAACACCAATTTGCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS TCA 90 bp TTACACAGTGTTTGCTACGGCAGTAGAGGTGATTTGGCTAGGCTCTaGGGATCACAAACAGCAACAGCATGCTGTAGCTTAAAGCCCACT +
Preference number: 5 (lower is better)
Translates to: LHSVCYGSRGDLARL*GSQTATACCSLKPT
Trigger: AGTGGGCTTTAAGCTACAGCATGCTGTTGCTGTTTGTGATCCTCAGAGCCTAGCCAAATCACCTCTACTGCCGTAGCAAACACTGTGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312504.10
ENST00000427124.1
ENST00000477752.1
CDS GCA 90 bp ACAACATTGTTCTGGTTCATAGACTGGGTTGACACACTCAGGAACTaGGCAGTCTGCTACAACACAGTGAACTTCATTGCTGGGCTCACA +
Preference number: 5 (lower is better)
Translates to: TTLFWFIDWVDTLRN*AVCYNTVNFIAGLT
Trigger: TGTGAGCCCAGCAATGAAGTTCACTGTGTTGTAGCAGACTGCGCAGTTCCTGAGTGTGTCAACCCAGTCTATGAACCAGAACAATGTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312504.10
CDS CCA 90 bp CATGAGTTCACTTACACAGTGTTTGCTACGGCAGTAGAGGTGATTTaGCTAGGCTCTGAGGATCACAAACAGCAACAGCATGCTGTAGCT +
Preference number: 5 (lower is better)
Translates to: HEFTYTVFATAVEVI*LGSEDHKQQQHAVA
Trigger: AGCTACAGCATGCTGTTGCTGTTTGTGATCCTCAGAGCCTAGCCAAATCACCTCTACTGCCGTAGCAAACACTGTGTAAGTGAACTCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312504.10
ENST00000427124.1
ENST00000477752.1
CDS CCA 90 bp GTTGGTCGCAAACAGGTCCATCTAGAGCACAGACACATGGACAGTTaGAATGCCCAGGGAAAAATCGTTCTCCCAACTTGTATACAAAGC +
Preference number: 5 (lower is better)
Translates to: VGRKQVHLEHRHMDS*NAQGKIVLPTCIQS
Trigger: GCTTTGTATACAAGTTGGGAGAACGATTTTTCCCTGGGCATTCCAACTGTCCATGTGTCTGTGCTCTAGATGGACCTGTTTGCGACCAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312504.10
ENST00000427124.1
ENST00000477752.1
CDS-3UTR CAA 90 bp ATGAAAGGCACCAACCTTGCTGCAAATTGGTGTTCTAAGGGAAGGTGGCTTGATTCCACAGTGTGTTGCTaGAATCCCCTCTTACACACC +
Preference number: 5 (lower is better)
Translates to: MKGTNLAANWCSKGRWLDSTVCC*NPLLHT
Trigger: GGTGTGTAAGAGGGGATTCAAGCAACACACTGTGGA...ATCAAGCCACCTTCCCTTAGAACACCAATTTGCAGCAAGGTTGGTGCCTTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CAA 90 bp CTTGATGCTCTTCCTCGGGATGGTGCCGGCATGGCTATTTGTATCATAACGCAAAATCGTTCTCCCAACTaGTATACAAAGCCGCTGTCA +
Preference number: 5 (lower is better)
Translates to: LDALPRDGAGMAICIITQNRSPN*YTKPLS
Trigger: TGACAGCGGCTTTGTATACAAGTTGGGAGAACGATT...TTGCGTTATGATACAAATAGCCATGCCGGCACCATCCCGAGGAAGAGCATCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CAA 90 bp AGCCCCCACCAACGAATAATGATCTGGCCCCAAATGTCAATCCTACTAAGATTGTTTAGGGCATTCTGGTaGGTCGCAAACAGGTCCATC +
Preference number: 5 (lower is better)
Translates to: SPHQRIMIWPQMSILLRLFRAFW*VANRSI
Trigger: GATGGACCTGTTTGCGACCAACCAGAATGCCCTAAA...CAATCTTAGTAGGATTGACATTTGGGGCCAGATCATTATTCGTTGGTGGGGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CAA 90 bp CTGAGTGGTTGTTACTACAACATGGCAAACACAGTCCCGAACCACAAAAACTGCATTGACTGGATGCTCTaGTGTTTCCCAGCTCGGGAA +
Preference number: 5 (lower is better)
Translates to: LSGCYYNMANTVPNHKNCIDWML*CFPARE
Trigger: TTCCCGAGCTGGGAAACACAAGAGCATCCAGTCAAT...GCAGTTTTTGTGGTTCGGGACTGTGTTTGCCATGTTGTAGTAACAACCACTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CAA 90 bp CAGGCTTCCACCAGTCCCCGTTGTGACAATGACAGATGTTACATTCGTCCACTTAATGTCTGGAGAAATTaGGTTGTCACCAGTTGCTGG +
Preference number: 5 (lower is better)
Translates to: QASTSPRCDNDRCYIRPLNVWRN*VVTSCW
Trigger: CCAGCAACTGGTGACAACCAAATTTCTCCAGACATT...AAGTGGACGAATGTAACATCTGTCATTGTCACAACGGGGACTGGTGGAAGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427124.1
CDS-3UTR CAA 90 bp AAATCCCTCTCTCTAGCTGGTTATCAGAGGCCACAGAACAGCCTGCTTTCTGCACAAGAGTGTGGATTTTaGAAGTTGGCAACAGGCAAC +
Preference number: 5 (lower is better)
Translates to: KSLSLAGYQRPQNSLLSAQECGF*KLATGN
Trigger: GTTGCCTGTTGCCAACTTCAAAAATCCACACTCTTG...TGCAGAAAGCAGGCTGTTCTGTGGCCTCTGATAACCAGCTAGAGAGAGGGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CAA 90 bp CAGGCTTCCACCAGTCCCCGTTGTGACAATGACAGATGTTACATTCGTCCACTTCAAGAGTGTGGATTTTaGAAGTTGGCAACAGGCAAC +
Preference number: 5 (lower is better)
Translates to: QASTSPRCDNDRCYIRPLQECGF*KLATGN
Trigger: GTTGCCTGTTGCCAACTTCAAAAATCCACACTCTTG...AAGTGGACGAATGTAACATCTGTCATTGTCACAACGGGGACTGGTGGAAGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427124.1
CDS-3UTR CAA 90 bp GCAAATTGGTGTTCTAAGGGAAGGTGGCTTGATGCTCTTCCTCGGGATGGTGCCACACATATAAGAAATTaGCTTTGGACCTGTCTTCAG +
Preference number: 5 (lower is better)
Translates to: ANWCSKGRWLDALPRDGATHIRN*LWTCLQ
Trigger: CTGAAGACAGGTCCAAAGCAAATTTCTTATATGTGT...GGCACCATCCCGAGGAAGAGCATCAAGCCACCTTCCCTTAGAACACCAATTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CAA 90 bp AAATCCCTCTCTCTAGCTGGTTATCAGAGGCCACAGAACAGCCTGCTTTCTGCACAGTTTGGACCATTTTaGCAGACAGGACAACATTGT +
Preference number: 5 (lower is better)
Translates to: KSLSLAGYQRPQNSLLSAQFGPF*QTGQHC
Trigger: ACAATGTTGTCCTGTCTGCAAAAATGGTCCAAACTG...TGCAGAAAGCAGGCTGTTCTGTGGCCTCTGATAACCAGCTAGAGAGAGGGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312504.10
CDS-3UTR CAA 90 bp TACTACAACATGGCAAACACAGTCCCGAACCACAAAAACTGCCAGTGTGTACTACACAGTCTGCTTGCCTaGGCATTCACGTTTCGAACA +
Preference number: 5 (lower is better)
Translates to: YYNMANTVPNHKNCQCVLHSLLA*AFTFRT
Trigger: TGTTCGAAACGTGAATGCCAAGGCAAGCAGACTGTG...TAGTACACACTGGCAGTTTTTGTGGTTCGGGACTGTGTTTGCCATGTTGTAGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CAA 90 bp ATGGCTCTCCACAGGAGCTATGGCAAAGCCCAGGTTGGGGGAGCAGAAAAAGAAAGTCACCATCAAGCATaGGTAAATACAAAAGCGATT +
Preference number: 5 (lower is better)
Translates to: MALHRSYGKAQVGGAEKESHHQA*VNTKAI
Trigger: AATCGCTTTTGTATTTACCAATGCTTGATGGTGACT...TTCTTTTTCTGCTCCCCCAACCTGGGCTTTGCCATAGCTCCTGTGGAGAGCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CAA 90 bp AAATCCCTCTCTCTAGCTGGTTATCAGAGGCCACAGAACAGCCTGCTTTCTGCAAATTTAAATCAGCACTaGAGGTGGAAAGGGTGTCCT +
Preference number: 5 (lower is better)
Translates to: KSLSLAGYQRPQNSLLSANLNQH*RWKGCP
Trigger: AGGACACCCTTTCCACCTCAAGTGCTGATTTAAATT...TGCAGAAAGCAGGCTGTTCTGTGGCCTCTGATAACCAGCTAGAGAGAGGGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CAA 90 bp GCTGCAAATTGGTGTTCTAAGGGAAGGTGGCTTGATGCTCTTCCTCGGGATGGTTCAGAATTGTTAATTTaGCACTTGAATCGAGGTGGC +
Preference number: 5 (lower is better)
Translates to: AANWCSKGRWLDALPRDGSELLI*HLNRGG
Trigger: GCCACCTCGATTCAAGTGCAAAATTAACAATTCTGA...ACCATCCCGAGGAAGAGCATCAAGCCACCTTCCCTTAGAACACCAATTTGCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CAA 90 bp GCTGAGTGGTTGTTACTACAACATGGCAAACACAGTCCCGAACCACAAAAACTGTCTGGAGAAATTTGGTaGTCACCAGTTGCTGGGATG +
Preference number: 5 (lower is better)
Translates to: AEWLLLQHGKHSPEPQKLSGEIW*SPVAGM
Trigger: CATCCCAGCAACTGGTGACAACCAAATTTCTCCAGA...CAGTTTTTGTGGTTCGGGACTGTGTTTGCCATGTTGTAGTAACAACCACTCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS TCA 90 bp CACTCAGGACAGCATCCATTGTGTTCCACTTTAGTACACTTTGGGTaGATTTTAGGGCATTCTGGTTGGTCGCAAACAGGTCCATCTAGA +
Preference number: 5 (lower is better)
Translates to: HSGQHPLCSTLVHFG*ILGHSGWSQTGPSR
Trigger: TCTAGATGGACCTGTTTGCGACCAACCAGAATGCCCTAAAATTCACCCAAAGTGTACTAAAGTGGAACACAATGGATGCTGTCCTGAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312504.10
ENST00000427124.1
ENST00000477752.1
CDS CCA 90 bp TTTGCACTCAGGACAGCATCCATTGTGTTCCACTTTAGTACACTTTaGGTGAATTTTAGGGCATTCTGGTTGGTCGCAAACAGGTCCATC +
Preference number: 5 (lower is better)
Translates to: FALRTASIVFHFSTL*VNFRAFWLVANRSI
Trigger: GATGGACCTGTTTGCGACCAACCAGAATGCCCTAAAATTCACCCAAAGTGTACTAAAGTGGAACACAATGGATGCTGTCCTGAGTGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312504.10
ENST00000427124.1
ENST00000477752.1
CDS-3UTR CAA 90 bp CATGGCAAACACAGTCCCGAACCACAAAAACTGCCAGTGTGTACTACTGACTTTAGAGCAGTTTGCAGATaGCTGATTTGGAGCTCATTC +
Preference number: 5 (lower is better)
Translates to: HGKHSPEPQKLPVCTTDFRAVCR*LIWSSF
Trigger: GAATGAGCTCCAAATCAGCAATCTGCAAACTGCTCT...AAAGTCAGTAGTACACACTGGCAGTTTTTGTGGTTCGGGACTGTGTTTGCCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CAA 90 bp GAGATGTTCATAAGGATTTGGATTCACAGTGGGTTTTCTCACCCTGGTTCTGGTCAGACACATGGACAGTaGGAATGCCCAGGGAAAAAT +
Preference number: 5 (lower is better)
Translates to: EMFIRIWIHSGFSHPGSGQTHGQ*ECPGKN
Trigger: ATTTTTCCCTGGGCATTCCAACTGTCCATGTGTCTG...ACCAGAACCAGGGTGAGAAAACCCACTGTGAATCCAAATCCTTATGAACATCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CAA 90 bp CTTGATGCTCTTCCTCGGGATGGTGCCGGCATGGCTATTTGTATCATAACGCAAACAAATGGAATTGTATaGTGCAAGACTCACTCTACC +
Preference number: 5 (lower is better)
Translates to: LDALPRDGAGMAICIITQTNGIV*CKTHST
Trigger: GGTAGAGTGAGTCTTGCACAATACAATTCCATTTGT...TTGCGTTATGATACAAATAGCCATGCCGGCACCATCCCGAGGAAGAGCATCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CAA 90 bp GGAGCAATTGACTGGATGCTCTTGTGTTTCCCAGCTCGGGAAAGATATTTCCCCTTGTTAATTTTGCACTaGAATCGAGGTGGCATCAGA +
Preference number: 5 (lower is better)
Translates to: GAIDWMLLCFPARERYFPLLILH*NRGGIR
Trigger: TCTGATGCCACCTCGATTCAAGTGCAAAATTAACAA...GGGGAAATATCTTTCCCGAGCTGGGAAACACAAGAGCATCCAGTCAATTGCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CAA 90 bp CCAGCAATCCAGTCGTCAAGTCACCATCAAGCATTGGTAAATACAAAAGCGATTTGTGGATTTTTGAAGTaGGCAACAGGCAACCTCGGG +
Preference number: 5 (lower is better)
Translates to: PAIQSSSHHQALVNTKAICGFLK*ATGNLG
Trigger: CCCGAGGTTGCCTGTTGCCAACTTCAAAAATCCACA...AATCGCTTTTGTATTTACCAATGCTTGATGGTGACTTGACGACTGGATTGCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CAA 90 bp AACATGGCAAACACAGTCCCGAACCACAAAAACTGCCAGTGTGTACTACTGACTCGCTGTGCCAATGCTTaGATGCAAAATTTCTGCACT +
Preference number: 5 (lower is better)
Translates to: NMANTVPNHKNCQCVLLTRCANA*MQNFCT
Trigger: AGTGCAGAAATTTTGCATCAAAGCATTGGCACAGCG...AGTCAGTAGTACACACTGGCAGTTTTTGTGGTTCGGGACTGTGTTTGCCATGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CAA 90 bp TACTACAACATGGCAAACACAGTCCCGAACCACAAAAACTGCCAGTGTGTACTAAGAGCAGTTTGCAGATaGCTGATTTGGAGCTCATTC +
Preference number: 5 (lower is better)
Translates to: YYNMANTVPNHKNCQCVLRAVCR*LIWSSF
Trigger: GAATGAGCTCCAAATCAGCAATCTGCAAACTGCTCT...TAGTACACACTGGCAGTTTTTGTGGTTCGGGACTGTGTTTGCCATGTTGTAGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CAA 90 bp TTTGGATTCACAGTGGGTTTTCTCACCCTGGTTCTGGTATTTATATTGCCTGATTCCACAGTGTGTTGCTaGAATCCCCTCTTACACACC +
Preference number: 5 (lower is better)
Translates to: FGFTVGFLTLVLVFILPDSTVCC*NPLLHT
Trigger: GGTGTGTAAGAGGGGATTCAAGCAACACACTGTGGA...ATCAGGCAATATAAATACCAGAACCAGGGTGAGAAAACCCACTGTGAATCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CAA 90 bp GATTCACAGTGGGTTTTCTCACCCTGGTTCTGGTATTTATATTGCCTGATGACATCATTGGGTGGAAGTTaGTCCTACACAGTCTGCTTG +
Preference number: 5 (lower is better)
Translates to: DSQWVFSPWFWYLYCLMTSLGGS*SYTVCL
Trigger: CAAGCAGACTGTGTAGGACAAACTTCCACCCAATGA...TGTCATCAGGCAATATAAATACCAGAACCAGGGTGAGAAAACCCACTGTGAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CAA 90 bp TTTGGATTCACAGTGGGTTTTCTCACCCTGGTTCTGGTATTTATATTGCCTGATATTGACTGGATGCTCTaGTGTTTCCCAGCTCGGGAA +
Preference number: 5 (lower is better)
Translates to: FGFTVGFLTLVLVFILPDIDWML*CFPARE
Trigger: TTCCCGAGCTGGGAAACACAAGAGCATCCAGTCAAT...ATCAGGCAATATAAATACCAGAACCAGGGTGAGAAAACCCACTGTGAATCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CAA 90 bp GCACCAACCTTGCTGCAAATTGGTGTTCTAAGGGAAGGTGGCTTGATGCTCTTCAAGATCTGTCTCTCTTaGGATTCTTTAGTTGAGCTT +
Preference number: 5 (lower is better)
Translates to: APTLLQIGVLREGGLMLFKICLS*DSLVEL
Trigger: AAGCTCAACTAAAGAATCCAAAGAGAGACAGATCTT...GAAGAGCATCAAGCCACCTTCCCTTAGAACACCAATTTGCAGCAAGGTTGGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CAA 90 bp CTTGATGCTCTTCCTCGGGATGGTGCCGGCATGGCTATTTGTATCATAACGCAAGTTCTGGTATTTATATaGCCTGATGACAGTGAGTTT +
Preference number: 5 (lower is better)
Translates to: LDALPRDGAGMAICIITQVLVFI*PDDSEF
Trigger: AAACTCACTGTCATCAGGCAATATAAATACCAGAAC...TTGCGTTATGATACAAATAGCCATGCCGGCACCATCCCGAGGAAGAGCATCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CAA 90 bp AACATGTGCAGTGTTGAAGCCATAGCATCCTTTCCTAAGAACTCATCATTGGGTTGCCGGCATGGCTATTaGTATCATAACGCAAGCACA +
Preference number: 5 (lower is better)
Translates to: NMCSVEAIASFPKNSSLGCRHGY*YHNAST
Trigger: TGTGCTTGCGTTATGATACAAATAGCCATGCCGGCA...ACCCAATGATGAGTTCTTAGGAAAGGATGCTATGGCTTCAACACTGCACATGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CAA 90 bp CCAGCAATCCAGTCGTCAAGTCACCATCAAGCATTGGTAAATACAAAAGCGATTTCAGGACAGCATCCATaGTGTTCCACTTTAGTACAC +
Preference number: 5 (lower is better)
Translates to: PAIQSSSHHQALVNTKAISGQHP*CSTLVH
Trigger: GTGTACTAAAGTGGAACACAATGGATGCTGTCCTGA...AATCGCTTTTGTATTTACCAATGCTTGATGGTGACTTGACGACTGGATTGCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CAA 90 bp GTCTATATGATGTATCCATGGTGGCAAATGAAAGGCACCAACCTTGCTGCAAATTCAGGACAGCATCCATaGTGTTCCACTTTAGTACAC +
Preference number: 5 (lower is better)
Translates to: VYMMYPWWQMKGTNLAANSGQHP*CSTLVH
Trigger: GTGTACTAAAGTGGAACACAATGGATGCTGTCCTGA...ATTTGCAGCAAGGTTGGTGCCTTTCATTTGCCACCATGGATACATCATATAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CAA 90 bp GTCTATATGATGTATCCATGGTGGCAAATGAAAGGCACCAACCTTGCTGCAAATCCTAAGAACTCATCATaGGGTGGAAGTTTGTCCTAC +
Preference number: 5 (lower is better)
Translates to: VYMMYPWWQMKGTNLAANPKNSS*GGSLSY
Trigger: GTAGGACAAACTTCCACCCAATGATGAGTTCTTAGG...ATTTGCAGCAAGGTTGGTGCCTTTCATTTGCCACCATGGATACATCATATAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CAA 90 bp GATGGTGCTAAACATCCTAAAAGCACACAGGACAGCCCCCACCAACGAATAATGAGTCACCATCAAGCATaGGTAAATACAAAAGCGATT +
Preference number: 5 (lower is better)
Translates to: DGAKHPKSTQDSPHQRIMSHHQA*VNTKAI
Trigger: AATCGCTTTTGTATTTACCAATGCTTGATGGTGACT...CATTATTCGTTGGTGGGGGCTGTCCTGTGTGCTTTTAGGATGTTTAGCACCATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CAA 90 bp AGCCCCCACCAACGAATAATGATCTGGCCCCAAATGTCAATCCTACTAAGATTGGATGTTCATAAGGATTaGGATTCACAGTGGGTTTTC +
Preference number: 5 (lower is better)
Translates to: SPHQRIMIWPQMSILLRLDVHKD*DSQWVF
Trigger: GAAAACCCACTGTGAATCCAAATCCTTATGAACATC...CAATCTTAGTAGGATTGACATTTGGGGCCAGATCATTATTCGTTGGTGGGGGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CAA 90 bp AACATGGCAAACACAGTCCCGAACCACAAAAACTGCCAGTGTGTACTACTGACTTCAATCCTACTAAGATaGAGACACCTTGCTCTAGAA +
Preference number: 5 (lower is better)
Translates to: NMANTVPNHKNCQCVLLTSILLR*RHLALE
Trigger: TTCTAGAGCAAGGTGTCTCAATCTTAGTAGGATTGA...AGTCAGTAGTACACACTGGCAGTTTTTGTGGTTCGGGACTGTGTTTGCCATGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CAA 90 bp TTCAGAATTGTTAATTTTGCACTTGAATCGAGGTGGCATCAGATACCCTGTGTGTGCCGGCATGGCTATTaGTATCATAACGCAAGCACA +
Preference number: 5 (lower is better)
Translates to: FRIVNFALESRWHQIPCVCRHGY*YHNAST
Trigger: TGTGCTTGCGTTATGATACAAATAGCCATGCCGGCA...CACACAGGGTATCTGATGCCACCTCGATTCAAGTGCAAAATTAACAATTCTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CAA 90 bp ATTGTTAATTTTGCACTTGAATCGAGGTGGCATCAGATACCCTGTGTGTTTTGTTGTGGATTTTTGAAGTaGGCAACAGGCAACCTCGGG +
Preference number: 5 (lower is better)
Translates to: IVNFALESRWHQIPCVFCCGFLK*ATGNLG
Trigger: CCCGAGGTTGCCTGTTGCCAACTTCAAAAATCCACA...ACAAAACACACAGGGTATCTGATGCCACCTCGATTCAAGTGCAAAATTAACAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS CCA 90 bp ACTTCTGGATGTGCTCCTAATATTAAATATACTCAGCTCCTTCCATaGGAATACAAGAGGGGTAGGCTAATCACTCTGGAGGTTAATGGT +
Preference number: 5 (lower is better)
Translates to: TSGCAPNIKYTQLLP*EYKRGRLITLEVNG
Trigger: ACCATTAACCTCCAGAGTGATTAGCCTACCCCTCTTGTATTCCCATGGAAGGAGCTGAGTATATTTAATATTAGGAGCACATCCAGAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312504.10
ENST00000427124.1
ENST00000477752.1
CDS-3UTR CAA 90 bp TTTGGATTCACAGTGGGTTTTCTCACCCTGGTTCTGGTATTTATATTGCCTGATAATCGTTCTCCCAACTaGTATACAAAGCCGCTGTCA +
Preference number: 5 (lower is better)
Translates to: FGFTVGFLTLVLVFILPDNRSPN*YTKPLS
Trigger: TGACAGCGGCTTTGTATACAAGTTGGGAGAACGATT...ATCAGGCAATATAAATACCAGAACCAGGGTGAGAAAACCCACTGTGAATCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CAA 90 bp TTCAGAATTGTTAATTTTGCACTTGAATCGAGGTGGCATCAGATACCCTGTGTGTTCCTGCAAAGCAGTTaGGACCATTTTTGCAGACAG +
Preference number: 5 (lower is better)
Translates to: FRIVNFALESRWHQIPCVFLQSS*DHFCRQ
Trigger: CTGTCTGCAAAAATGGTCCAAACTGCTTTGCAGGAA...CACACAGGGTATCTGATGCCACCTCGATTCAAGTGCAAAATTAACAATTCTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312504.10
CDS-3UTR CAA 90 bp TACTACAACATGGCAAACACAGTCCCGAACCACAAAAACTGCCAGTGTGTACTAACAAATGGAATTGTATaGTGCAAGACTCACTCTACC +
Preference number: 5 (lower is better)
Translates to: YYNMANTVPNHKNCQCVLTNGIV*CKTHST
Trigger: GGTAGAGTGAGTCTTGCACAATACAATTCCATTTGT...TAGTACACACTGGCAGTTTTTGTGGTTCGGGACTGTGTTTGCCATGTTGTAGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CAA 90 bp AGCCCCCACCAACGAATAATGATCTGGCCCCAAATGTCAATCCTACTAAGATTGGTTCAACAAATGGAATaGTATTGTGCAAGACTCACT +
Preference number: 5 (lower is better)
Translates to: SPHQRIMIWPQMSILLRLVQQME*YCARLT
Trigger: AGTGAGTCTTGCACAATACAATTCCATTTGTTGAAC...CAATCTTAGTAGGATTGACATTTGGGGCCAGATCATTATTCGTTGGTGGGGGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CAA 90 bp TCGGGGCAAAGAAAGCTCTATAATACATCTCTGTCTAGACATAAGCTAAAGTGTTCTGGAGAAATTTGGTaGTCACCAGTTGCTGGGATG +
Preference number: 5 (lower is better)
Translates to: SGQRKLYNTSLSRHKLKCSGEIW*SPVAGM
Trigger: CATCCCAGCAACTGGTGACAACCAAATTTCTCCAGA...ACACTTTAGCTTATGTCTAGACAGAGATGTATTATAGAGCTTTCTTTGCCCCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CAA 90 bp GTCTATATGATGTATCCATGGTGGCAAATGAAAGGCACCAACCTTGCTGCAAATAATGACAACTCTTTCTaGATGACAGCAGATGCTTCC +
Preference number: 5 (lower is better)
Translates to: VYMMYPWWQMKGTNLAANNDNSF*MTADAS
Trigger: GGAAGCATCTGCTGTCATCAAGAAAGAGTTGTCATT...ATTTGCAGCAAGGTTGGTGCCTTTCATTTGCCACCATGGATACATCATATAGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CAA 90 bp ATGTCAGGTCTGACTCGTCAGCACGTTAATTTTGGAAATGACAACTCTTTCTTGATCAGTAAGAGCAGTTaGCAGATTGCTGATTTGGAG +
Preference number: 5 (lower is better)
Translates to: MSGLTRQHVNFGNDNSFLISKSS*QIADLE
Trigger: CTCCAAATCAGCAATCTGCAAACTGCTCTTACTGAT...CAAGAAAGAGTTGTCATTTCCAAAATTAACGTGCTGACGAGTCAGACCTGACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CAA 90 bp GATTCACAGTGGGTTTTCTCACCCTGGTTCTGGTATTTATATTGCCTGATGACATCATCAAAGATCAGATaGTCATTACTGGAGATCTGG +
Preference number: 5 (lower is better)
Translates to: DSQWVFSPWFWYLYCLMTSSKIR*SLLEIW
Trigger: CCAGATCTCCAGTAATGACAATCTGATCTTTGATGA...TGTCATCAGGCAATATAAATACCAGAACCAGGGTGAGAAAACCCACTGTGAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CAA 90 bp AGAAAGCTCTATAATACATCTCTGTCTAGACATAAGCTAAAGTGTGGAATTCCTTCCTACACAGTCTGCTaGCCTTGGCATTCACGTTTC +
Preference number: 5 (lower is better)
Translates to: RKLYNTSLSRHKLKCGIPSYTVC*PWHSRF
Trigger: GAAACGTGAATGCCAAGGCAAGCAGACTGTGTAGGA...AGGAATTCCACACTTTAGCTTATGTCTAGACAGAGATGTATTATAGAGCTTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CAA 90 bp TCGGGGCAAAGAAAGCTCTATAATACATCTCTGTCTAGACATAAGCTAAAGTGTCCTAAGAACTCATCATaGGGTGGAAGTTTGTCCTAC +
Preference number: 5 (lower is better)
Translates to: SGQRKLYNTSLSRHKLKCPKNSS*GGSLSY
Trigger: GTAGGACAAACTTCCACCCAATGATGAGTTCTTAGG...ACACTTTAGCTTATGTCTAGACAGAGATGTATTATAGAGCTTTCTTTGCCCCGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CAA 90 bp AGAAAGCTCTATAATACATCTCTGTCTAGACATAAGCTAAAGTGTGGAATTCCTACCCTAGGGGAGCAATaGACTGGATGCTCTTGTGTT +
Preference number: 5 (lower is better)
Translates to: RKLYNTSLSRHKLKCGIPTLGEQ*TGCSCV
Trigger: AACACAAGAGCATCCAGTCAATTGCTCCCCTAGGGT...AGGAATTCCACACTTTAGCTTATGTCTAGACAGAGATGTATTATAGAGCTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CAA 90 bp GAGATGTTCATAAGGATTTGGATTCACAGTGGGTTTTCTCACCCTGGTTCTGGTAAGATCTGTCTCTCTTaGGATTCTTTAGTTGAGCTT +
Preference number: 5 (lower is better)
Translates to: EMFIRIWIHSGFSHPGSGKICLS*DSLVEL
Trigger: AAGCTCAACTAAAGAATCCAAAGAGAGACAGATCTT...ACCAGAACCAGGGTGAGAAAACCCACTGTGAATCCAAATCCTTATGAACATCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CAA 90 bp ATTGTTAATTTTGCACTTGAATCGAGGTGGCATCAGATACCCTGTGTGTTTTGTCATAGGGCTGAGTGGTaGTTACTACAACATGGCAAA +
Preference number: 5 (lower is better)
Translates to: IVNFALESRWHQIPCVFCHRAEW*LLQHGK
Trigger: TTTGCCATGTTGTAGTAACAACCACTCAGCCCTATG...ACAAAACACACAGGGTATCTGATGCCACCTCGATTCAAGTGCAAAATTAACAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CAA 90 bp TACTACAACATGGCAAACACAGTCCCGAACCACAAAAACTGCCAGTGTGTACTAGTTCAACAAATGGAATaGTATTGTGCAAGACTCACT +
Preference number: 5 (lower is better)
Translates to: YYNMANTVPNHKNCQCVLVQQME*YCARLT
Trigger: AGTGAGTCTTGCACAATACAATTCCATTTGTTGAAC...TAGTACACACTGGCAGTTTTTGTGGTTCGGGACTGTGTTTGCCATGTTGTAGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CAA 90 bp GTCTATATGATGTATCCATGGTGGCAAATGAAAGGCACCAACCTTGCTGCAAATTTGTTAATTTTGCACTaGAATCGAGGTGGCATCAGA +
Preference number: 5 (lower is better)
Translates to: VYMMYPWWQMKGTNLAANLLILH*NRGGIR
Trigger: TCTGATGCCACCTCGATTCAAGTGCAAAATTAACAA...ATTTGCAGCAAGGTTGGTGCCTTTCATTTGCCACCATGGATACATCATATAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CAA 90 bp ATTGTTAATTTTGCACTTGAATCGAGGTGGCATCAGATACCCTGTGTGTTTTGTCGCTGTGCCAATGCTTaGATGCAAAATTTCTGCACT +
Preference number: 5 (lower is better)
Translates to: IVNFALESRWHQIPCVFCRCANA*MQNFCT
Trigger: AGTGCAGAAATTTTGCATCAAAGCATTGGCACAGCG...ACAAAACACACAGGGTATCTGATGCCACCTCGATTCAAGTGCAAAATTAACAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CAA 90 bp AACATGTGCAGTGTTGAAGCCATAGCATCCTTTCCTAAGAACTCATCATTGGGTACACATATAAGAAATTaGCTTTGGACCTGTCTTCAG +
Preference number: 5 (lower is better)
Translates to: NMCSVEAIASFPKNSSLGTHIRN*LWTCLQ
Trigger: CTGAAGACAGGTCCAAAGCAAATTTCTTATATGTGT...ACCCAATGATGAGTTCTTAGGAAAGGATGCTATGGCTTCAACACTGCACATGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CAA 90 bp GTCTATATGATGTATCCATGGTGGCAAATGAAAGGCACCAACCTTGCTGCAAATGTTCTGGTATTTATATaGCCTGATGACAGTGAGTTT +
Preference number: 5 (lower is better)
Translates to: VYMMYPWWQMKGTNLAANVLVFI*PDDSEF
Trigger: AAACTCACTGTCATCAGGCAATATAAATACCAGAAC...ATTTGCAGCAAGGTTGGTGCCTTTCATTTGCCACCATGGATACATCATATAGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CAA 90 bp TTCAGAATTGTTAATTTTGCACTTGAATCGAGGTGGCATCAGATACCCTGTGTGGATGTTCATAAGGATTaGGATTCACAGTGGGTTTTC +
Preference number: 5 (lower is better)
Translates to: FRIVNFALESRWHQIPCVDVHKD*DSQWVF
Trigger: GAAAACCCACTGTGAATCCAAATCCTTATGAACATC...CACACAGGGTATCTGATGCCACCTCGATTCAAGTGCAAAATTAACAATTCTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CAA 90 bp TTTTGTTCCAGCAATCCAGTCGTCAAGTCACCATCAAGCATTGGTAAATACAAATCATCAAAGATCAGATaGTCATTACTGGAGATCTGG +
Preference number: 5 (lower is better)
Translates to: FCSSNPVVKSPSSIGKYKSSKIR*SLLEIW
Trigger: CCAGATCTCCAGTAATGACAATCTGATCTTTGATGA...TTTGTATTTACCAATGCTTGATGGTGACTTGACGACTGGATTGCTGGAACAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS-3UTR CAA 90 bp AGAAAGCTCTATAATACATCTCTGTCTAGACATAAGCTAAAGTGTGGAATTCCTTCAGAATTGTTAATTTaGCACTTGAATCGAGGTGGC +
Preference number: 5 (lower is better)
Translates to: RKLYNTSLSRHKLKCGIPSELLI*HLNRGG
Trigger: GCCACCTCGATTCAAGTGCAAAATTAACAATTCTGA...AGGAATTCCACACTTTAGCTTATGTCTAGACAGAGATGTATTATAGAGCTTTCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312504.10
ENST00000427124.1
CDS GCA 72 bp AGAGCAGTTTGCAGATTGCTGATTTGGAGCTCATTCTaGCGGCAGCCGGGAATTCCTCAGCACCACGGACAG +
Preference number: 6 (lower is better)
Translates to: RAVCRLLIWSSF*RQPGIPQHHGQ
Trigger: CTGTCCGTGGTGCTGAGGAATTCCCGGCTGCCGGCAGAATGAGCTCCAAATCAGCAATCTGCAAACTGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312504.10
ENST00000427124.1
ENST00000477752.1
CDS GCA 72 bp GAACTGCGCAGTCTGCTACAACACAGTGAACTTCATTaGTGGGCTCACAGCGACACCATTCACATGGAGAGG +
Preference number: 6 (lower is better)
Translates to: ELRSLLQHSELH*WAHSDTIHMER
Trigger: CCTCTCCATGTGAATGGTGTCGCTGTGAGCCCAGCAATGAAGTTCACTGTGTTGTAGCAGACTGCGCAGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312504.10
CDS TCA 72 bp ACACACTCAGGAACTGCGCAGTCTGCTACAACACAGTaGACTTCATTGCTGGGCTCACAGCGACACCATTCA +
Preference number: 6 (lower is better)
Translates to: THSGTAQSATTQ*TSLLGSQRHHS
Trigger: TGAATGGTGTCGCTGTGAGCCCAGCAATGAAGTTCACTGTGTTGTAGCAGACTGCGCAGTTCCTGAGTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312504.10
CDS CAA 72 bp TTCTGCATCAGTAAGAGCAGTTTGCAGATTGCTGATTaGGAGCTCATTCTGCCGGCAGCCGGGAATTCCTCA +
Preference number: 6 (lower is better)
Translates to: FCISKSSLQIAD*ELILPAAGNSS
Trigger: TGAGGAATTCCCGGCTGCCGGCAGAATGAGCTCCAAATCAGCAATCTGCAAACTGCTCTTACTGATGCAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312504.10
ENST00000427124.1
ENST00000477752.1
CDS CAA 90 bp AAAGCCCACTCCGCTGGCAATACCATCACCATCGTCCACAGTGTGTaGCTTGAATCCCCTCTTACACACCGGAAAATACTAACTGTGGAT +
Preference number: 6 (lower is better)
Translates to: KAHSAGNTITIVHSV*LESPLTHRKILTVD
Trigger: ATCCACAGTTAGTATTTTCCGGTGTGTAAGAGGGGATTCAAGCAACACACTGTGGACGATGGTGATGGTATTGCCAGCGGAGTGGGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312504.10
ENST00000427124.1
ENST00000477752.1
CDS TCA 72 bp GTTTGCTACGGCAGTAGAGGTGATTTGGCTAGGCTCTaGGGATCACAAACAGCAACAGCATGCTGTAGCTTA +
Preference number: 6 (lower is better)
Translates to: VCYGSRGDLARL*GSQTATACCSL
Trigger: TAAGCTACAGCATGCTGTTGCTGTTTGTGATCCTCAGAGCCTAGCCAAATCACCTCTACTGCCGTAGCAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312504.10
ENST00000427124.1
ENST00000477752.1
CDS TCA 72 bp AGACAGGACAACATTGTTCTGGTTCATAGACTGGGTTaGCACACTCAGGAACTGCGCAGTCTGCTACAACAC +
Preference number: 6 (lower is better)
Translates to: RQDNIVLVHRLG*HTQELRSLLQH
Trigger: GTGTTGTAGCAGACTGCGCAGTTCCTGAGTGTGTCAACCCAGTCTATGAACCAGAACAATGTTGTCCTGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312504.10
CDS CCA 72 bp TTTGCAGACAGGACAACATTGTTCTGGTTCATAGACTaGGTTGACACACTCAGGAACTGCGCAGTCTGCTAC +
Preference number: 6 (lower is better)
Translates to: FADRTTLFWFID*VDTLRNCAVCY
Trigger: GTAGCAGACTGCGCAGTTCCTGAGTGTGTCAACCCAGTCTATGAACCAGAACAATGTTGTCCTGTCTGCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312504.10
CDS GCA 72 bp TTCTGGTTCATAGACTGGGTTGACACACTCAGGAACTaGGCAGTCTGCTACAACACAGTGAACTTCATTGCT +
Preference number: 6 (lower is better)
Translates to: FWFIDWVDTLRN*AVCYNTVNFIA
Trigger: AGCAATGAAGTTCACTGTGTTGTAGCAGACTGCGCAGTTCCTGAGTGTGTCAACCCAGTCTATGAACCAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312504.10
CDS CCA 72 bp AAACAGGTCCATCTAGAGCACAGACACATGGACAGTTaGAATGCCCAGGGAAAAATCGTTCTCCCAACTTGT +
Preference number: 6 (lower is better)
Translates to: KQVHLEHRHMDS*NAQGKIVLPTC
Trigger: ACAAGTTGGGAGAACGATTTTTCCCTGGGCATTCCAACTGTCCATGTGTCTGTGCTCTAGATGGACCTGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312504.10
ENST00000427124.1
ENST00000477752.1
CDS TCA 72 bp TGGCAATACCATCACCATCGTCCACAGTGTGTTGCTTaGATCCCCTCTTACACACCGGAAAATACTAACTGT +
Preference number: 6 (lower is better)
Translates to: WQYHHHRPQCVA*IPSYTPENTNC
Trigger: ACAGTTAGTATTTTCCGGTGTGTAAGAGGGGATTCAAGCAACACACTGTGGACGATGGTGATGGTATTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312504.10
ENST00000427124.1
ENST00000477752.1
CDS TCA 72 bp CAGCATCCATTGTGTTCCACTTTAGTACACTTTGGGTaGATTTTAGGGCATTCTGGTTGGTCGCAAACAGGT +
Preference number: 6 (lower is better)
Translates to: QHPLCSTLVHFG*ILGHSGWSQTG
Trigger: ACCTGTTTGCGACCAACCAGAATGCCCTAAAATTCACCCAAAGTGTACTAAAGTGGAACACAATGGATGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312504.10
ENST00000427124.1
ENST00000477752.1
CDS CAA 90 bp CTCCCGCCCTTCCAGAAAGAAACACAGCAGACACATATAAGAAATTaGCTTTGGACCTGTCTTCAGAATTCAAAGCAAGAAGCAAAGCTG +
Preference number: 6 (lower is better)
Translates to: LPPFQKETQQTHIRN*LWTCLQNSKQEAKL
Trigger: CAGCTTTGCTTCTTGCTTTGAATTCTGAAGACAGGTCCAAAGCAAATTTCTTATATGTGTCTGCTGTGTTTCTTTCTGGAAGGGCGGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312504.10
ENST00000427124.1
ENST00000477752.1
CDS CCA 72 bp TCCCTCGATAGTCATCAAAGATCAGATTGTCATTACTaGAGATCTGGTCACCTTCATCAGCAGGATAGTCTT +
Preference number: 6 (lower is better)
Translates to: SLDSHQRSDCHY*RSGHLHQQDSL
Trigger: AAGACTATCCTGCTGATGAAGGTGACCAGATCTCCAGTAATGACAATCTGATCTTTGATGACTATCGAGGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312504.10
ENST00000427124.1
ENST00000477752.1