RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for VWC2 (Homo sapiens)

Ensembl gene IDs: ENSG00000188730

Ensembl transcript IDs: ENST00000340652.5

Found 318 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGGCTTACAGACCCCTTGATGTCAAGGACACTGTGCCTCTCCATCTaGACTAGCTGCAACATTATAGCAGGACTTGCCTGGACTGGAGTG +
Preference number: 1 (lower is better)
Translates to: RLTDPLMSRTLCLSI*TSCNIIAGLAWTGV
Trigger: CACTCCAGTCCAGGCAAGTCCTGCTATAATGTTGCAGCTAGTGCAGATGGAGAGGCACAGTGTCCTTGACATCAAGGGGTCTGTAAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR GCA 90 bp AGGGATGGGAACAACTCACCTATGCCTTTTAACTCCTATCATCTCTaGTGGAAACCAGACCCATCCTCCAGCCAGCATGTTCTCACCCTG +
Preference number: 1 (lower is better)
Translates to: RDGNNSPMPFNSYHL*WKPDPSSSQHVLTL
Trigger: CAGGGTGAGAACATGCTGGCTGGAGGATGGGTCTGGTTTCCAGCAGAGATGATAGGAGTTAAAAGGCATAGGTGAGTTGTTCCCATCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR GCA 90 bp GACCCCTTGATGTCAAGGACACTGTGCCTCTCCATCTGCACTAGCTaGAACATTATAGCAGGACTTGCCTGGACTGGAGTGCATCTAATA +
Preference number: 1 (lower is better)
Translates to: DPLMSRTLCLSICTS*NIIAGLAWTGVHLI
Trigger: TATTAGATGCACTCCAGTCCAGGCAAGTCCTGCTATAATGTTGCAGCTAGTGCAGATGGAGAGGCACAGTGTCCTTGACATCAAGGGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR GCA 90 bp AACTCGGCCAAGCAGAGTCTCTCTCTGTTCCCTTACATCCTTCACTaGTTAGGTCCAGCTTTCCGTGGACTTAAGTCTGACTTAAAAGGA +
Preference number: 1 (lower is better)
Translates to: NSAKQSLSLFPYILH*LGPAFRGLKSDLKG
Trigger: TCCTTTTAAGTCAGACTTAAGTCCACGGAAAGCTGGACCTAAGCAGTGAAGGATGTAAGGGAACAGAGAGAGACTCTGCTTGGCCGAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR GCA 90 bp AAATTAGTTTCAAGGCTTACAGACCCCTTGATGTCAAGGACACTGTaGCTCTCCATCTGCACTAGCTGCAACATTATAGCAGGACTTGCC +
Preference number: 1 (lower is better)
Translates to: KLVSRLTDPLMSRTL*LSICTSCNIIAGLA
Trigger: GGCAAGTCCTGCTATAATGTTGCAGCTAGTGCAGATGGAGAGGCACAGTGTCCTTGACATCAAGGGGTCTGTAAGCCTTGAAACTAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR CCA 90 bp TGCCTCTCCATCTGCACTAGCTGCAACATTATAGCAGGACTTGCCTaGACTGGAGTGCATCTAATACTTCTTGCATGCAGGGATGAAATA +
Preference number: 1 (lower is better)
Translates to: CLSICTSCNIIAGLA*TGVHLILLACRDEI
Trigger: TATTTCATCCCTGCATGCAAGAAGTATTAGATGCACTCCAGTCCAGGCAAGTCCTGCTATAATGTTGCAGCTAGTGCAGATGGAGAGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR TCA 90 bp TTGGTCCTAATATCTTATGATCCATTCATGCGTGACTCTGCCCTGTaGAAATGTGCAGGGGGAACATTCCTGGGTGATGGAATCAGAACT +
Preference number: 1 (lower is better)
Translates to: LVLISYDPFMRDSAL*KCAGGTFLGDGIRT
Trigger: AGTTCTGATTCCATCACCCAGGAATGTTCCCCCTGCACATTTTCACAGGGCAGAGTCACGCATGAATGGATCATAAGATATTAGGACCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR TCA 90 bp ACTCTATCACCCAGGTCTAAATTGCAGTTGACACATAGAATGCAATaGATAAATCGATTCAGTAAGACTCACAGCTGCTCCCCAGGGAAG +
Preference number: 1 (lower is better)
Translates to: TLSPRSKLQLTHRMQ*INRFSKTHSCSPGK
Trigger: CTTCCCTGGGGAGCAGCTGTGAGTCTTACTGAATCGATTTATTCATTGCATTCTATGTGTCAACTGCAATTTAGACCTGGGTGATAGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR TCA 90 bp TATGGTGTACAATACAGGAGCTTAGGGGAAAGAACTGAGAAAGTGTaGGTTAGTGATCTTTACACCTGCATTTCACAAGTGACTGAGAAT +
Preference number: 1 (lower is better)
Translates to: YGVQYRSLGERTEKV*VSDLYTCISQVTEN
Trigger: ATTCTCAGTCACTTGTGAAATGCAGGTGTAAAGATCACTAACTCACACTTTCTCAGTTCTTTCCCCTAAGCTCCTGTATTGTACACCATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR GCA 90 bp TGCAGGTACACGGTGAGGACGGTTGACAACACAGCATTTTTAATCTaGATCTATAGAAAACACTTATATAAGCTCTCTAATGGAGGGATT +
Preference number: 1 (lower is better)
Translates to: CRYTVRTVDNTAFLI*IYRKHLYKLSNGGI
Trigger: AATCCCTCCATTAGAGAGCTTATATAAGTGTTTTCTATAGATGCAGATTAAAAATGCTGTGTTGTCAACCGTCCTCACCGTGTACCTGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR TCA 90 bp GGTCAAACTAAGTTTAGAGCAAGTGAGTCAGTTAACTTCCCAAGATaGTACTGGGTTCATTCTCTCTATATGCAACAAAATACTAGGTTT +
Preference number: 1 (lower is better)
Translates to: GQTKFRASESVNFPR*YWVHSLYMQQNTRF
Trigger: AAACCTAGTATTTTGTTGCATATAGAGAGAATGAACCCAGTATCATCTTGGGAAGTTAACTGACTCACTTGCTCTAAACTTAGTTTGACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR CCA 90 bp GTGGCTAATTCAAGGTTATCAGTCAAGATTTTACTGTGTAGTTTATaGAGGATAGATGACTCAAGTCTGATGACAAATATGATTCCACTG +
Preference number: 1 (lower is better)
Translates to: VANSRLSVKILLCSL*RIDDSSLMTNMIPL
Trigger: CAGTGGAATCATATTTGTCATCAGACTTGAGTCATCTATCCTCCATAAACTACACAGTAAAATCTTGACTGATAACCTTGAATTAGCCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR-3UTR CCA 90 bp GATGAGTGGGACTACCTCTGTCCACCCACAACCTTCACCATTGCTGTTATTGTTCCAGCCACAGGGGCCTaGGTCATGGTGTTGTCCATG +
Preference number: 2 (lower is better)
Translates to: DEWDYLCPPTTFTIAVIVPATGA*VMVLSM
Trigger: CATGGACAACACCATGACCCAGGCCCCTGTGGCTGG...AACAATAACAGCAATGGTGAAGGTTGTGGGTGGACAGAGGTAGTCCCACTCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR-3UTR TCA 90 bp CAGCTGCTCCCCAGGGAAGAATATTTGGAAGCAGGTAGAGCTATCCATTCCAGTGGCTTACAGACCCCTTaGTGTCAAGGACACTGTGCC +
Preference number: 2 (lower is better)
Translates to: QLLPREEYLEAGRAIHSSGLQTP*CQGHCA
Trigger: GGCACAGTGTCCTTGACATCAAGGGGTCTGTAAGCC...ACTGGAATGGATAGCTCTACCTGCTTCCAAATATTCTTCCCTGGGGAGCAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR-3UTR CCA 90 bp CAGCTGCTCCCCAGGGAAGAATATTTGGAAGCAGGTAGAGCTATCCATTCCAGTTGGCCCACCTACCCATaGGGGCTAGGGCCATTTATT +
Preference number: 2 (lower is better)
Translates to: QLLPREEYLEAGRAIHSSWPTYP*GLGPFI
Trigger: AATAAATGGCCCTAGCCCCCATGGGTAGGTGGGCCA...ACTGGAATGGATAGCTCTACCTGCTTCCAAATATTCTTCCCTGGGGAGCAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR-3UTR TCA 90 bp GATGAGTGGGACTACCTCTGTCCACCCACAACCTTCACCATTGCTGTTATTGTTTCCTCACTCTGCTTGTaGAGGGTGGCTAATTCAAGG +
Preference number: 2 (lower is better)
Translates to: DEWDYLCPPTTFTIAVIVSSLCL*RVANSR
Trigger: CCTTGAATTAGCCACCCTTCACAAGCAGAGTGAGGA...AACAATAACAGCAATGGTGAAGGTTGTGGGTGGACAGAGGTAGTCCCACTCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR-3UTR TCA 90 bp CAGCTGCTCCCCAGGGAAGAATATTTGGAAGCAGGTAGAGCTATCCATTCCAGTTGTGCTACGGAGCAATaGGAACCTGATCTTTGGAAG +
Preference number: 2 (lower is better)
Translates to: QLLPREEYLEAGRAIHSSCATEQ*EPDLWK
Trigger: CTTCCAAAGATCAGGTTCTCATTGCTCCGTAGCACA...ACTGGAATGGATAGCTCTACCTGCTTCCAAATATTCTTCCCTGGGGAGCAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR-3UTR TCA 90 bp GATGAGTGGGACTACCTCTGTCCACCCACAACCTTCACCATTGCTGTTATTGTTTTGAGCTGCATGGACTaGGTCTCTAACTGCATCATG +
Preference number: 2 (lower is better)
Translates to: DEWDYLCPPTTFTIAVIVLSCMD*VSNCIM
Trigger: CATGATGCAGTTAGAGACTCAGTCCATGCAGCTCAA...AACAATAACAGCAATGGTGAAGGTTGTGGGTGGACAGAGGTAGTCCCACTCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR-3UTR TCA 90 bp GATGAGTGGGACTACCTCTGTCCACCCACAACCTTCACCATTGCTGTTATTGTTCAGCAAAGAGTTCTCTaGCAACAGAGGGGAGGAAAA +
Preference number: 2 (lower is better)
Translates to: DEWDYLCPPTTFTIAVIVQQRVL*QQRGGK
Trigger: TTTTCCTCCCCTCTGTTGTCAGAGAACTCTTTGCTG...AACAATAACAGCAATGGTGAAGGTTGTGGGTGGACAGAGGTAGTCCCACTCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR-3UTR GCA 90 bp CAGCTGCTCCCCAGGGAAGAATATTTGGAAGCAGGTAGAGCTATCCATTCCAGTCTTATGATCCATTCATaGGTGACTCTGCCCTGTGAA +
Preference number: 2 (lower is better)
Translates to: QLLPREEYLEAGRAIHSSLMIHS*VTLPCE
Trigger: TTCACAGGGCAGAGTCACGCATGAATGGATCATAAG...ACTGGAATGGATAGCTCTACCTGCTTCCAAATATTCTTCCCTGGGGAGCAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR-3UTR CCA 90 bp CAGCTGCTCCCCAGGGAAGAATATTTGGAAGCAGGTAGAGCTATCCATTCCAGTGCAGTTTACTTCTCTTaGCTCCAGAAAAACTGGGTC +
Preference number: 2 (lower is better)
Translates to: QLLPREEYLEAGRAIHSSAVYFS*LQKNWV
Trigger: GACCCAGTTTTTCTGGAGCCAAGAGAAGTAAACTGC...ACTGGAATGGATAGCTCTACCTGCTTCCAAATATTCTTCCCTGGGGAGCAGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR-3UTR TCA 90 bp CAGCTGCTCCCCAGGGAAGAATATTTGGAAGCAGGTAGAGCTATCCATTCCAGTGAAGTTGGTGTGAAGTaGGGATATGACATAAGTAGG +
Preference number: 2 (lower is better)
Translates to: QLLPREEYLEAGRAIHSSEVGVK*GYDISR
Trigger: CCTACTTATGTCATATCCTCACTTCACACCAACTTC...ACTGGAATGGATAGCTCTACCTGCTTCCAAATATTCTTCCCTGGGGAGCAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR-3UTR GCA 90 bp TGGGTCCAAAGACCATATATGACTCTATCACCCAGGTCTAAATTGCAGTTGACATGCCCTGTGAAAATGTaGAGGGGGAACATTCCTGGG +
Preference number: 2 (lower is better)
Translates to: WVQRPYMTLSPRSKLQLTCPVKM*RGNIPG
Trigger: CCCAGGAATGTTCCCCCTGCACATTTTCACAGGGCA...TGTCAACTGCAATTTAGACCTGGGTGATAGAGTCATATATGGTCTTTGGACCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR-3UTR GCA 90 bp CAGCTGCTCCCCAGGGAAGAATATTTGGAAGCAGGTAGAGCTATCCATTCCAGTTCCATCTGCACTAGCTaGAACATTATAGCAGGACTT +
Preference number: 2 (lower is better)
Translates to: QLLPREEYLEAGRAIHSSSICTS*NIIAGL
Trigger: AAGTCCTGCTATAATGTTGCAGCTAGTGCAGATGGA...ACTGGAATGGATAGCTCTACCTGCTTCCAAATATTCTTCCCTGGGGAGCAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR-3UTR GCA 90 bp GATGAGTGGGACTACCTCTGTCCACCCACAACCTTCACCATTGCTGTTATTGTTCTGTGCCTCTCCATCTaGACTAGCTGCAACATTATA +
Preference number: 2 (lower is better)
Translates to: DEWDYLCPPTTFTIAVIVLCLSI*TSCNII
Trigger: TATAATGTTGCAGCTAGTGCAGATGGAGAGGCACAG...AACAATAACAGCAATGGTGAAGGTTGTGGGTGGACAGAGGTAGTCCCACTCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR-3UTR CCA 90 bp CAGCTGCTCCCCAGGGAAGAATATTTGGAAGCAGGTAGAGCTATCCATTCCAGTCTAATCTCCATTTGCTaGTCTCTAGTTTGGCTCCTA +
Preference number: 2 (lower is better)
Translates to: QLLPREEYLEAGRAIHSSLISIC*SLVWLL
Trigger: TAGGAGCCAAACTAGAGACCAGCAAATGGAGATTAG...ACTGGAATGGATAGCTCTACCTGCTTCCAAATATTCTTCCCTGGGGAGCAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR-3UTR CCA 90 bp GATGAGTGGGACTACCTCTGTCCACCCACAACCTTCACCATTGCTGTTATTGTTAGGACTTGCCTGGACTaGAGTGCATCTAATACTTCT +
Preference number: 2 (lower is better)
Translates to: DEWDYLCPPTTFTIAVIVRTCLD*SASNTS
Trigger: AGAAGTATTAGATGCACTCCAGTCCAGGCAAGTCCT...AACAATAACAGCAATGGTGAAGGTTGTGGGTGGACAGAGGTAGTCCCACTCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR-3UTR CCA 90 bp GATGAGTGGGACTACCTCTGTCCACCCACAACCTTCACCATTGCTGTTATTGTTATAGCAGGACTTGCCTaGACTGGAGTGCATCTAATA +
Preference number: 2 (lower is better)
Translates to: DEWDYLCPPTTFTIAVIVIAGLA*TGVHLI
Trigger: TATTAGATGCACTCCAGTCCAGGCAAGTCCTGCTAT...AACAATAACAGCAATGGTGAAGGTTGTGGGTGGACAGAGGTAGTCCCACTCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR-3UTR TCA 90 bp GATGAGTGGGACTACCTCTGTCCACCCACAACCTTCACCATTGCTGTTATTGTTGTTAACTTCCCAAGATaGTACTGGGTTCATTCTCTC +
Preference number: 2 (lower is better)
Translates to: DEWDYLCPPTTFTIAVIVVNFPR*YWVHSL
Trigger: GAGAGAATGAACCCAGTATCATCTTGGGAAGTTAAC...AACAATAACAGCAATGGTGAAGGTTGTGGGTGGACAGAGGTAGTCCCACTCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR-3UTR TCA 90 bp CAGCTGCTCCCCAGGGAAGAATATTTGGAAGCAGGTAGAGCTATCCATTCCAGTACCAGTCTTCCATGTTaGGGAGTTTGGATGTTATTT +
Preference number: 2 (lower is better)
Translates to: QLLPREEYLEAGRAIHSSTSLPC*GVWMLF
Trigger: AAATAACATCCAAACTCCTCAACATGGAAGACTGGT...ACTGGAATGGATAGCTCTACCTGCTTCCAAATATTCTTCCCTGGGGAGCAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR-3UTR GCA 90 bp CAGCTGCTCCCCAGGGAAGAATATTTGGAAGCAGGTAGAGCTATCCATTCCAGTTTTCTAATCTCCATTTaGTGGTCTCTAGTTTGGCTC +
Preference number: 2 (lower is better)
Translates to: QLLPREEYLEAGRAIHSSFLISI*WSLVWL
Trigger: GAGCCAAACTAGAGACCAGCAAATGGAGATTAGAAA...ACTGGAATGGATAGCTCTACCTGCTTCCAAATATTCTTCCCTGGGGAGCAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR-3UTR GCA 90 bp TGGGTCCAAAGACCATATATGACTCTATCACCCAGGTCTAAATTGCAGTTGACAATGTCAAGGACACTGTaGCTCTCCATCTGCACTAGC +
Preference number: 2 (lower is better)
Translates to: WVQRPYMTLSPRSKLQLTMSRTL*LSICTS
Trigger: GCTAGTGCAGATGGAGAGGCACAGTGTCCTTGACAT...TGTCAACTGCAATTTAGACCTGGGTGATAGAGTCATATATGGTCTTTGGACCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR-3UTR CCA 90 bp GATGAGTGGGACTACCTCTGTCCACCCACAACCTTCACCATTGCTGTTATTGTTACTATAGGAAAGTTGTaGAGTGCACTTGGTCTTCAG +
Preference number: 2 (lower is better)
Translates to: DEWDYLCPPTTFTIAVIVTIGKL*SALGLQ
Trigger: CTGAAGACCAAGTGCACTCCACAACTTTCCTATAGT...AACAATAACAGCAATGGTGAAGGTTGTGGGTGGACAGAGGTAGTCCCACTCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR-3UTR CCA 90 bp CAGCTGCTCCCCAGGGAAGAATATTTGGAAGCAGGTAGAGCTATCCATTCCAGTAGCAGGACTTTGCAGTaGCTTTTTATGTTCTCTGTT +
Preference number: 2 (lower is better)
Translates to: QLLPREEYLEAGRAIHSSSRTLQ*LFMFSV
Trigger: AACAGAGAACATAAAAAGCCACTGCAAAGTCCTGCT...ACTGGAATGGATAGCTCTACCTGCTTCCAAATATTCTTCCCTGGGGAGCAGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR-3UTR TCA 90 bp ACTGGAGTGCATCTAATACTTCTTGCATGCAGGGATGAAATACAAGTTTTTGAACGTGACTCTGCCCTGTaGAAATGTGCAGGGGGAACA +
Preference number: 2 (lower is better)
Translates to: TGVHLILLACRDEIQVFERDSAL*KCAGGT
Trigger: TGTTCCCCCTGCACATTTTCACAGGGCAGAGTCACG...TTCAAAAACTTGTATTTCATCCCTGCATGCAAGAAGTATTAGATGCACTCCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR-3UTR TCA 90 bp GATGAGTGGGACTACCTCTGTCCACCCACAACCTTCACCATTGCTGTTATTGTTTTGTCTGCTTCAGCTTaGTGGAACAGTAATGCAAAT +
Preference number: 2 (lower is better)
Translates to: DEWDYLCPPTTFTIAVIVLSASA*WNSNAN
Trigger: ATTTGCATTACTGTTCCATCAAGCTGAAGCAGACAA...AACAATAACAGCAATGGTGAAGGTTGTGGGTGGACAGAGGTAGTCCCACTCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR-3UTR TCA 90 bp CAGCTGCTCCCCAGGGAAGAATATTTGGAAGCAGGTAGAGCTATCCATTCCAGTCTTCAGAATAGTTACTaGCTGTATCAACCATCAGAT +
Preference number: 2 (lower is better)
Translates to: QLLPREEYLEAGRAIHSSLQNSY*LYQPSD
Trigger: ATCTGATGGTTGATACAGTCAGTAACTATTCTGAAG...ACTGGAATGGATAGCTCTACCTGCTTCCAAATATTCTTCCCTGGGGAGCAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR-3UTR TCA 90 bp GATGAGTGGGACTACCTCTGTCCACCCACAACCTTCACCATTGCTGTTATTGTTTCAAATCACGGGCTCTaGTATAAAGCAGATTTGGAT +
Preference number: 2 (lower is better)
Translates to: DEWDYLCPPTTFTIAVIVSNHGL*YKADLD
Trigger: ATCCAAATCTGCTTTATATCAGAGCCCGTGATTTGA...AACAATAACAGCAATGGTGAAGGTTGTGGGTGGACAGAGGTAGTCCCACTCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR-3UTR GCA 90 bp CAGCTGCTCCCCAGGGAAGAATATTTGGAAGCAGGTAGAGCTATCCATTCCAGTAGATTAGCAGGACTTTaGAGTGGCTTTTTATGTTCT +
Preference number: 2 (lower is better)
Translates to: QLLPREEYLEAGRAIHSSRLAGL*SGFLCS
Trigger: AGAACATAAAAAGCCACTGCAAAGTCCTGCTAATCT...ACTGGAATGGATAGCTCTACCTGCTTCCAAATATTCTTCCCTGGGGAGCAGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR-3UTR GCA 90 bp CAGCTGCTCCCCAGGGAAGAATATTTGGAAGCAGGTAGAGCTATCCATTCCAGTTTCATATACTTCTTATaGCAGAGACCGAAAGTCCAA +
Preference number: 2 (lower is better)
Translates to: QLLPREEYLEAGRAIHSSFIYFL*QRPKVQ
Trigger: TTGGACTTTCGGTCTCTGGCATAAGAAGTATATGAA...ACTGGAATGGATAGCTCTACCTGCTTCCAAATATTCTTCCCTGGGGAGCAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR-3UTR GCA 90 bp CAGCTGCTCCCCAGGGAAGAATATTTGGAAGCAGGTAGAGCTATCCATTCCAGTCTTAGCATGTTTTACTaGACAAAGCAGGTGATGAAA +
Preference number: 2 (lower is better)
Translates to: QLLPREEYLEAGRAIHSSLSMFY*TKQVMK
Trigger: TTTCATCACCTGCTTTGTGCAGTAAAACATGCTAAG...ACTGGAATGGATAGCTCTACCTGCTTCCAAATATTCTTCCCTGGGGAGCAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR-3UTR CCA 90 bp CAGCTGCTCCCCAGGGAAGAATATTTGGAAGCAGGTAGAGCTATCCATTCCAGTTGGCTCCAGAAAAACTaGGTCACAATATTTGGTTAT +
Preference number: 2 (lower is better)
Translates to: QLLPREEYLEAGRAIHSSWLQKN*VTIFGY
Trigger: ATAACCAAATATTGTGACCCAGTTTTTCTGGAGCCA...ACTGGAATGGATAGCTCTACCTGCTTCCAAATATTCTTCCCTGGGGAGCAGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR-3UTR CCA 90 bp GATGAGTGGGACTACCTCTGTCCACCCACAACCTTCACCATTGCTGTTATTGTTTGCAAAAGTTCAAAATaGCATGTGATGCCATCGCTT +
Preference number: 2 (lower is better)
Translates to: DEWDYLCPPTTFTIAVIVCKSSK*HVMPSL
Trigger: AAGCGATGGCATCACATGCCATTTTGAACTTTTGCA...AACAATAACAGCAATGGTGAAGGTTGTGGGTGGACAGAGGTAGTCCCACTCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR-3UTR TCA 90 bp ACTGGAGTGCATCTAATACTTCTTGCATGCAGGGATGAAATACAAGTTTTTGAATATGCAGGTACACGGTaGGGACGGTTGACAACACAG +
Preference number: 2 (lower is better)
Translates to: TGVHLILLACRDEIQVFEYAGTR*GRLTTQ
Trigger: CTGTGTTGTCAACCGTCCTCACCGTGTACCTGCATA...TTCAAAAACTTGTATTTCATCCCTGCATGCAAGAAGTATTAGATGCACTCCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR-3UTR TCA 90 bp GATGAGTGGGACTACCTCTGTCCACCCACAACCTTCACCATTGCTGTTATTGTTTTTATGGAGGATAGATaGCTCAAGTCTGATGACAAA +
Preference number: 2 (lower is better)
Translates to: DEWDYLCPPTTFTIAVIVFMEDR*LKSDDK
Trigger: TTTGTCATCAGACTTGAGTCATCTATCCTCCATAAA...AACAATAACAGCAATGGTGAAGGTTGTGGGTGGACAGAGGTAGTCCCACTCATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR-3UTR TCA 90 bp TGGGTCCAAAGACCATATATGACTCTATCACCCAGGTCTAAATTGCAGTTGACACAAACAATCCATCCTTaGATAAAGGAGGGATGGCCA +
Preference number: 2 (lower is better)
Translates to: WVQRPYMTLSPRSKLQLTQTIHP*IKEGWP
Trigger: TGGCCATCCCTCCTTTATTCAAGGATGGATTGTTTG...TGTCAACTGCAATTTAGACCTGGGTGATAGAGTCATATATGGTCTTTGGACCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR-3UTR TCA 90 bp TCACCTAATAAATGGCAGTTTACTTCTCTTGGCTCCAGAAAAACTGGGTCACAAGGAGCAATGAGAACCTaGTCTTTGGAAGTTGCAGCT +
Preference number: 2 (lower is better)
Translates to: SPNKWQFTSLGSRKTGSQGAMRT*SLEVAA
Trigger: AGCTGCAACTTCCAAAGATCAGGTTCTCATTGCTCC...TTGTGACCCAGTTTTTCTGGAGCCAAGAGAAGTAAACTGCCATTTATTAGGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR-3UTR TCA 90 bp GATGAGTGGGACTACCTCTGTCCACCCACAACCTTCACCATTGCTGTTATTGTTTGTCTCTGGGTTCTGTaGCTTAGATATTTGATACTT +
Preference number: 2 (lower is better)
Translates to: DEWDYLCPPTTFTIAVIVCLWVL*LRYLIL
Trigger: AAGTATCAAATATCTAAGTCACAGAACCCAGAGACA...AACAATAACAGCAATGGTGAAGGTTGTGGGTGGACAGAGGTAGTCCCACTCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR-3UTR GCA 90 bp CAGCTGCTCCCCAGGGAAGAATATTTGGAAGCAGGTAGAGCTATCCATTCCAGTTTCCCTTGTTGTCAATaGTTTGTACTTAATAGGTTC +
Preference number: 2 (lower is better)
Translates to: QLLPREEYLEAGRAIHSSFPCCQ*FVLNRF
Trigger: GAACCTATTAAGTACAAAGCATTGACAACAAGGGAA...ACTGGAATGGATAGCTCTACCTGCTTCCAAATATTCTTCCCTGGGGAGCAGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR-3UTR GCA 90 bp TCACCTAATAAATGGCAGTTTACTTCTCTTGGCTCCAGAAAAACTGGGTCACAACATTATAGCAGGACTTaGCTGGACTGGAGTGCATCT +
Preference number: 2 (lower is better)
Translates to: SPNKWQFTSLGSRKTGSQHYSRT*LDWSAS
Trigger: AGATGCACTCCAGTCCAGGCAAGTCCTGCTATAATG...TTGTGACCCAGTTTTTCTGGAGCCAAGAGAAGTAAACTGCCATTTATTAGGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR-3UTR GCA 90 bp TGGGTCCAAAGACCATATATGACTCTATCACCCAGGTCTAAATTGCAGTTGACAAGGCTGTTTAATCTGTaGTACGGAGCAATGAGAACC +
Preference number: 2 (lower is better)
Translates to: WVQRPYMTLSPRSKLQLTRLFNL*YGAMRT
Trigger: GGTTCTCATTGCTCCGTAGCACAGATTAAACAGCCT...TGTCAACTGCAATTTAGACCTGGGTGATAGAGTCATATATGGTCTTTGGACCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR-3UTR CCA 90 bp GATGAGTGGGACTACCTCTGTCCACCCACAACCTTCACCATTGCTGTTATTGTTTGCTGGTCTCTAGTTTaGCTCCTAATACAATACATT +
Preference number: 2 (lower is better)
Translates to: DEWDYLCPPTTFTIAVIVCWSLV*LLIQYI
Trigger: AATGTATTGTATTAGGAGCCAAACTAGAGACCAGCA...AACAATAACAGCAATGGTGAAGGTTGTGGGTGGACAGAGGTAGTCCCACTCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR-3UTR CCA 90 bp TGGGTCCAAAGACCATATATGACTCTATCACCCAGGTCTAAATTGCAGTTGACAAAGCCTTACCAGCAATaGCACTTGAACTGGACATTG +
Preference number: 2 (lower is better)
Translates to: WVQRPYMTLSPRSKLQLTKPYQQ*HLNWTL
Trigger: CAATGTCCAGTTCAAGTGCCATTGCTGGTAAGGCTT...TGTCAACTGCAATTTAGACCTGGGTGATAGAGTCATATATGGTCTTTGGACCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR CAA 90 bp AGTATTATAATCAAACCTAAATTAGTTTCAAGGCTTACAGACCCCTaGATGTCAAGGACACTGTGCCTCTCCATCTGCACTAGCTGCAAC +
Preference number: 2 (lower is better)
Translates to: SIIIKPKLVSRLTDP*MSRTLCLSICTSCN
Trigger: GTTGCAGCTAGTGCAGATGGAGAGGCACAGTGTCCTTGACATCAAGGGGTCTGTAAGCCTTGAAACTAATTTAGGTTTGATTATAATACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR-3UTR TCA 90 bp TCACCTAATAAATGGCAGTTTACTTCTCTTGGCTCCAGAAAAACTGGGTCACAATCTATACTTGAATTCTaGGGCCCCCTTTTCTGTGCT +
Preference number: 2 (lower is better)
Translates to: SPNKWQFTSLGSRKTGSQSILEF*GPLFCA
Trigger: AGCACAGAAAAGGGGGCCTCAGAATTCAAGTATAGA...TTGTGACCCAGTTTTTCTGGAGCCAAGAGAAGTAAACTGCCATTTATTAGGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR-3UTR GCA 90 bp TCACCTAATAAATGGCAGTTTACTTCTCTTGGCTCCAGAAAAACTGGGTCACAAGAACTGAAAAAGATATaGAGGTACACGGTGAGGACG +
Preference number: 2 (lower is better)
Translates to: SPNKWQFTSLGSRKTGSQELKKI*RYTVRT
Trigger: CGTCCTCACCGTGTACCTGCATATCTTTTTCAGTTC...TTGTGACCCAGTTTTTCTGGAGCCAAGAGAAGTAAACTGCCATTTATTAGGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR-3UTR GCA 90 bp TGGGTCCAAAGACCATATATGACTCTATCACCCAGGTCTAAATTGCAGTTGACACCCTATTTTGTTGTCTaGTTCAGCTTGATGGAACAG +
Preference number: 2 (lower is better)
Translates to: WVQRPYMTLSPRSKLQLTPYFVV*FSLMEQ
Trigger: CTGTTCCATCAAGCTGAAGCAGACAACAAAATAGGG...TGTCAACTGCAATTTAGACCTGGGTGATAGAGTCATATATGGTCTTTGGACCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR-3UTR GCA 90 bp TCACCTAATAAATGGCAGTTTACTTCTCTTGGCTCCAGAAAAACTGGGTCACAATCTCTAACTGCATCATaGCTGATGGAGAGAGAAGAG +
Preference number: 2 (lower is better)
Translates to: SPNKWQFTSLGSRKTGSQSLTAS*LMEREE
Trigger: CTCTTCTCTCTCCATCAGGCATGATGCAGTTAGAGA...TTGTGACCCAGTTTTTCTGGAGCCAAGAGAAGTAAACTGCCATTTATTAGGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR-3UTR GCA 90 bp TGGGTCCAAAGACCATATATGACTCTATCACCCAGGTCTAAATTGCAGTTGACAAGGCCCCCTTTTCTGTaGTATCTCCAAACCATATTA +
Preference number: 2 (lower is better)
Translates to: WVQRPYMTLSPRSKLQLTRPPFL*YLQTIL
Trigger: TAATATGGTTTGGAGATAGCACAGAAAAGGGGGCCT...TGTCAACTGCAATTTAGACCTGGGTGATAGAGTCATATATGGTCTTTGGACCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR-3UTR GCA 90 bp GATGAGTGGGACTACCTCTGTCCACCCACAACCTTCACCATTGCTGTTATTGTTTATTTTGTGTGTGATTaGGATCCTCAAAGAATTCAG +
Preference number: 2 (lower is better)
Translates to: DEWDYLCPPTTFTIAVIVYFVCD*DPQRIQ
Trigger: CTGAATTCTTTGAGGATCGCAATCACACACAAAATA...AACAATAACAGCAATGGTGAAGGTTGTGGGTGGACAGAGGTAGTCCCACTCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR-3UTR CCA 90 bp TGGGTCCAAAGACCATATATGACTCTATCACCCAGGTCTAAATTGCAGTTGACATCTGCTTGTGAAGGGTaGCTAATTCAAGGTTATCAG +
Preference number: 2 (lower is better)
Translates to: WVQRPYMTLSPRSKLQLTSACEG*LIQGYQ
Trigger: CTGATAACCTTGAATTAGCCACCCTTCACAAGCAGA...TGTCAACTGCAATTTAGACCTGGGTGATAGAGTCATATATGGTCTTTGGACCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR-3UTR CCA 90 bp TCACCTAATAAATGGCAGTTTACTTCTCTTGGCTCCAGAAAAACTGGGTCACAAGACTTGCACCAGAAATaGCCAATAGCTGTCAGAGTT +
Preference number: 2 (lower is better)
Translates to: SPNKWQFTSLGSRKTGSQDLHQK*PIAVRV
Trigger: AACTCTGACAGCTATTGGCCATTTCTGGTGCAAGTC...TTGTGACCCAGTTTTTCTGGAGCCAAGAGAAGTAAACTGCCATTTATTAGGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR-3UTR TCA 90 bp TCACCTAATAAATGGCAGTTTACTTCTCTTGGCTCCAGAAAAACTGGGTCACAATCATGGTGTTGTCCATaGTCTAATTGTGAAGACACC +
Preference number: 2 (lower is better)
Translates to: SPNKWQFTSLGSRKTGSQSWCCP*SNCEDT
Trigger: GGTGTCTTCACAATTAGATCATGGACAACACCATGA...TTGTGACCCAGTTTTTCTGGAGCCAAGAGAAGTAAACTGCCATTTATTAGGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR-3UTR TCA 90 bp ACTGGAGTGCATCTAATACTTCTTGCATGCAGGGATGAAATACAAGTTTTTGAACACGGTGAGGACGGTTaGCAACACAGCATTTTTAAT +
Preference number: 2 (lower is better)
Translates to: TGVHLILLACRDEIQVFEHGEDG*QHSIFN
Trigger: ATTAAAAATGCTGTGTTGTCAACCGTCCTCACCGTG...TTCAAAAACTTGTATTTCATCCCTGCATGCAAGAAGTATTAGATGCACTCCAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR-3UTR TCA 90 bp TCACCTAATAAATGGCAGTTTACTTCTCTTGGCTCCAGAAAAACTGGGTCACAATGTAATAACAGCCATTaGGCTTTAGCTCTTAGGAGT +
Preference number: 2 (lower is better)
Translates to: SPNKWQFTSLGSRKTGSQCNNSH*ALALRS
Trigger: ACTCCTAAGAGCTAAAGCTCAATGGCTGTTATTACA...TTGTGACCCAGTTTTTCTGGAGCCAAGAGAAGTAAACTGCCATTTATTAGGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR-3UTR TCA 90 bp TGGGTCCAAAGACCATATATGACTCTATCACCCAGGTCTAAATTGCAGTTGACAAGAACAGTTTGTTGTTaGCAATCTCAGCAAAGAGTT +
Preference number: 2 (lower is better)
Translates to: WVQRPYMTLSPRSKLQLTRTVCC*QSQQRV
Trigger: AACTCTTTGCTGAGATTGTCAACAACAAACTGTTCT...TGTCAACTGCAATTTAGACCTGGGTGATAGAGTCATATATGGTCTTTGGACCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR-3UTR TCA 90 bp TGGGTCCAAAGACCATATATGACTCTATCACCCAGGTCTAAATTGCAGTTGACATTACCCACCATATGTTaGCTTCTTCATCAATATAGC +
Preference number: 2 (lower is better)
Translates to: WVQRPYMTLSPRSKLQLTLPTIC*LLHQYS
Trigger: GCTATATTGATGAAGAAGTCAACATATGGTGGGTAA...TGTCAACTGCAATTTAGACCTGGGTGATAGAGTCATATATGGTCTTTGGACCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR-3UTR GCA 90 bp ACTGGAGTGCATCTAATACTTCTTGCATGCAGGGATGAAATACAAGTTTTTGAAAGGAAAGTTGTGGAGTaGACTTGGTCTTCAGCTTTG +
Preference number: 2 (lower is better)
Translates to: TGVHLILLACRDEIQVFERKVVE*TWSSAL
Trigger: CAAAGCTGAAGACCAAGTGCACTCCACAACTTTCCT...TTCAAAAACTTGTATTTCATCCCTGCATGCAAGAAGTATTAGATGCACTCCAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR-3UTR CCA 90 bp TGGGTCCAAAGACCATATATGACTCTATCACCCAGGTCTAAATTGCAGTTGACAATGCAACATTTATGTTaGAGAACGAGGGAAGAAAGT +
Preference number: 2 (lower is better)
Translates to: WVQRPYMTLSPRSKLQLTMQHLC*RTREES
Trigger: ACTTTCTTCCCTCGTTCTCCAACATAAATGTTGCAT...TGTCAACTGCAATTTAGACCTGGGTGATAGAGTCATATATGGTCTTTGGACCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR-3UTR TCA 90 bp TCACCTAATAAATGGCAGTTTACTTCTCTTGGCTCCAGAAAAACTGGGTCACAAACTGCAAGAAGAAGTTaGTCTTGGACAAAAATGCAA +
Preference number: 2 (lower is better)
Translates to: SPNKWQFTSLGSRKTGSQTARRS*SWTKMQ
Trigger: TTGCATTTTTGTCCAAGATCAACTTCTTCTTGCAGT...TTGTGACCCAGTTTTTCTGGAGCCAAGAGAAGTAAACTGCCATTTATTAGGTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR-3UTR CCA 90 bp TGGGTCCAAAGACCATATATGACTCTATCACCCAGGTCTAAATTGCAGTTGACATTACTGTGTAGTTTATaGAGGATAGATGACTCAAGT +
Preference number: 2 (lower is better)
Translates to: WVQRPYMTLSPRSKLQLTLLCSL*RIDDSS
Trigger: ACTTGAGTCATCTATCCTCCATAAACTACACAGTAA...TGTCAACTGCAATTTAGACCTGGGTGATAGAGTCATATATGGTCTTTGGACCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR CAA 90 bp TCTGTAGCACATTTAGATTTCAGGTATATAAACTTGTTTAGGAGTTaGATTTTCCTTAACTATCCTAGGAGAATCGAAGGACTCCTCCCC +
Preference number: 2 (lower is better)
Translates to: SVAHLDFRYINLFRS*IFLNYPRRIEGLLP
Trigger: GGGGAGGAGTCCTTCGATTCTCCTAGGATAGTTAAGGAAAATCAAACTCCTAAACAAGTTTATATACCTGAAATCTAAATGTGCTACAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR-3UTR TCA 90 bp ACTGGAGTGCATCTAATACTTCTTGCATGCAGGGATGAAATACAAGTTTTTGAACACCGCATGCTGATATaGTTGATAAAGGTAGAACTA +
Preference number: 2 (lower is better)
Translates to: TGVHLILLACRDEIQVFEHRMLI*LIKVEL
Trigger: TAGTTCTACCTTTATCAATCATATCAGCATGCGGTG...TTCAAAAACTTGTATTTCATCCCTGCATGCAAGAAGTATTAGATGCACTCCAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR-3UTR CCA 90 bp ACTGGAGTGCATCTAATACTTCTTGCATGCAGGGATGAAATACAAGTTTTTGAAGTATGTGCTTACCTATaGTGTACAATACAGGAGCTT +
Preference number: 2 (lower is better)
Translates to: TGVHLILLACRDEIQVFEVCAYL*CTIQEL
Trigger: AAGCTCCTGTATTGTACACCATAGGTAAGCACATAC...TTCAAAAACTTGTATTTCATCCCTGCATGCAAGAAGTATTAGATGCACTCCAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR CAA 90 bp TTCATGTTCTCCATCTTCTCATTAGGAAGGCTTTCTAATCTCCATTaGCTGGTCTCTAGTTTGGCTCCTAATACAATACATTATGATTTC +
Preference number: 2 (lower is better)
Translates to: FMFSIFSLGRLSNLH*LVSSLAPNTIHYDF
Trigger: GAAATCATAATGTATTGTATTAGGAGCCAAACTAGAGACCAGCAAATGGAGATTAGAAAGCCTTCCTAATGAGAAGATGGAGAACATGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR CAA 90 bp AGCAAAACGACAACTTTAAATAACTGTGTCTCAAACAATCCATCCTaGAATAAAGGAGGGATGGCCAATGTCTACCAGTCTTTAATACAA +
Preference number: 2 (lower is better)
Translates to: SKTTTLNNCVSNNPS*NKGGMANVYQSLIQ
Trigger: TTGTATTAAAGACTGGTAGACATTGGCCATCCCTCCTTTATTCAAGGATGGATTGTTTGAGACACAGTTATTTAAAGTTGTCGTTTTGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR CCA 72 bp ACCTGGCCGGTGGCAGCTGAGCCCCCTGGGGATGAGTaGGACTACCTCTGTCCACCCACAACCTTCACCATT +
Preference number: 3 (lower is better)
Translates to: TWPVAAEPPGDE*DYLCPPTTFTI
Trigger: AATGGTGAAGGTTGTGGGTGGACAGAGGTAGTCCCACTCATCCCCAGGGGGCTCAGCTGCCACCGGCCAGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR GCA 72 bp ATGTCAAGGACACTGTGCCTCTCCATCTGCACTAGCTaGAACATTATAGCAGGACTTGCCTGGACTGGAGTG +
Preference number: 3 (lower is better)
Translates to: MSRTLCLSICTS*NIIAGLAWTGV
Trigger: CACTCCAGTCCAGGCAAGTCCTGCTATAATGTTGCAGCTAGTGCAGATGGAGAGGCACAGTGTCCTTGACAT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR GCA 72 bp TCAAGGCTTACAGACCCCTTGATGTCAAGGACACTGTaGCTCTCCATCTGCACTAGCTGCAACATTATAGCA +
Preference number: 3 (lower is better)
Translates to: SRLTDPLMSRTL*LSICTSCNIIA
Trigger: TGCTATAATGTTGCAGCTAGTGCAGATGGAGAGGCACAGTGTCCTTGACATCAAGGGGTCTGTAAGCCTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR GCA 72 bp AAGCAGAGTCTCTCTCTGTTCCCTTACATCCTTCACTaGTTAGGTCCAGCTTTCCGTGGACTTAAGTCTGAC +
Preference number: 3 (lower is better)
Translates to: KQSLSLFPYILH*LGPAFRGLKSD
Trigger: GTCAGACTTAAGTCCACGGAAAGCTGGACCTAAGCAGTGAAGGATGTAAGGGAACAGAGAGAGACTCTGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR-3UTR CAA 90 bp CAGCTGCTCCCCAGGGAAGAATATTTGGAAGCAGGTAGAGCTATCCATTCCAGTGTACTGGTAGTTCCTTaGGCTCAAGGTGTTCTTTAT +
Preference number: 3 (lower is better)
Translates to: QLLPREEYLEAGRAIHSSVLVVP*AQGVLY
Trigger: ATAAAGAACACCTTGAGCCAAAGGAACTACCAGTAC...ACTGGAATGGATAGCTCTACCTGCTTCCAAATATTCTTCCCTGGGGAGCAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR-3UTR CAA 90 bp GATGAGTGGGACTACCTCTGTCCACCCACAACCTTCACCATTGCTGTTATTGTTTCAAACAATCCATCCTaGAATAAAGGAGGGATGGCC +
Preference number: 3 (lower is better)
Translates to: DEWDYLCPPTTFTIAVIVSNNPS*NKGGMA
Trigger: GGCCATCCCTCCTTTATTCAAGGATGGATTGTTTGA...AACAATAACAGCAATGGTGAAGGTTGTGGGTGGACAGAGGTAGTCCCACTCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR-3UTR CAA 90 bp CAGCTGCTCCCCAGGGAAGAATATTTGGAAGCAGGTAGAGCTATCCATTCCAGTCACCAGTCTTCCATGTaGAGGAGTTTGGATGTTATT +
Preference number: 3 (lower is better)
Translates to: QLLPREEYLEAGRAIHSSHQSSM*RSLDVI
Trigger: AATAACATCCAAACTCCTCAACATGGAAGACTGGTG...ACTGGAATGGATAGCTCTACCTGCTTCCAAATATTCTTCCCTGGGGAGCAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR TCA 72 bp ATATCTTATGATCCATTCATGCGTGACTCTGCCCTGTaGAAATGTGCAGGGGGAACATTCCTGGGTGATGGA +
Preference number: 3 (lower is better)
Translates to: ISYDPFMRDSAL*KCAGGTFLGDG
Trigger: TCCATCACCCAGGAATGTTCCCCCTGCACATTTTCACAGGGCAGAGTCACGCATGAATGGATCATAAGATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR GCA 72 bp CATTCCTGGGTGATGGAATCAGAACTGAAAAAGATATaGAGGTACACGGTGAGGACGGTTGACAACACAGCA +
Preference number: 3 (lower is better)
Translates to: HSWVMESELKKI*RYTVRTVDNTA
Trigger: TGCTGTGTTGTCAACCGTCCTCACCGTGTACCTGCATATCTTTTTCAGTTCTGATTCCATCACCCAGGAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR GCA 72 bp GTGGGACTACCTCTGTCCACCCACAACCTTCACCATTaGTGTTATTGTTTGGAGTGGGGACAATCTTTGTTT +
Preference number: 3 (lower is better)
Translates to: VGLPLSTHNLHH*CYCLEWGQSLF
Trigger: AAACAAAGATTGTCCCCACTCCAAACAATAACAGCAATGGTGAAGGTTGTGGGTGGACAGAGGTAGTCCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR GCA 72 bp AACAACTCACCTATGCCTTTTAACTCCTATCATCTCTaGTGGAAACCAGACCCATCCTCCAGCCAGCATGTT +
Preference number: 3 (lower is better)
Translates to: NNSPMPFNSYHL*WKPDPSSSQHV
Trigger: AACATGCTGGCTGGAGGATGGGTCTGGTTTCCAGCAGAGATGATAGGAGTTAAAAGGCATAGGTGAGTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR CCA 72 bp ATCTGCACTAGCTGCAACATTATAGCAGGACTTGCCTaGACTGGAGTGCATCTAATACTTCTTGCATGCAGG +
Preference number: 3 (lower is better)
Translates to: ICTSCNIIAGLA*TGVHLILLACR
Trigger: CCTGCATGCAAGAAGTATTAGATGCACTCCAGTCCAGGCAAGTCCTGCTATAATGTTGCAGCTAGTGCAGAT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR CCA 72 bp CCAGCATGTTCTCACCCTGGTTTCCTGAAAGCATCATaGGCATTCCCTTTTGATCAGTTTGCTCTCCTCTTT +
Preference number: 3 (lower is better)
Translates to: PACSHPGFLKAS*AFPFDQFALLF
Trigger: AAAGAGGAGAGCAAACTGATCAAAAGGGAATGCCCATGATGCTTTCAGGAAACCAGGGTGAGAACATGCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR-3UTR CAA 90 bp CAGCTGCTCCCCAGGGAAGAATATTTGGAAGCAGGTAGAGCTATCCATTCCAGTCATCAAAAGTCTTCTTaGACTGATAGTTCCCAGAGT +
Preference number: 3 (lower is better)
Translates to: QLLPREEYLEAGRAIHSSHQKSS*TDSSQS
Trigger: ACTCTGGGAACTATCAGTCAAAGAAGACTTTTGATG...ACTGGAATGGATAGCTCTACCTGCTTCCAAATATTCTTCCCTGGGGAGCAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR-3UTR CAA 90 bp GATGAGTGGGACTACCTCTGTCCACCCACAACCTTCACCATTGCTGTTATTGTTAGTTGTGGAGTGCACTaGGTCTTCAGCTTTGTTTTA +
Preference number: 3 (lower is better)
Translates to: DEWDYLCPPTTFTIAVIVSCGVH*VFSFVL
Trigger: TAAAACAAAGCTGAAGACCAAGTGCACTCCACAACT...AACAATAACAGCAATGGTGAAGGTTGTGGGTGGACAGAGGTAGTCCCACTCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR-3UTR CAA 90 bp CAGCTGCTCCCCAGGGAAGAATATTTGGAAGCAGGTAGAGCTATCCATTCCAGTTTGCTGGTCTCTAGTTaGGCTCCTAATACAATACAT +
Preference number: 3 (lower is better)
Translates to: QLLPREEYLEAGRAIHSSLLVSS*APNTIH
Trigger: ATGTATTGTATTAGGAGCCAAACTAGAGACCAGCAA...ACTGGAATGGATAGCTCTACCTGCTTCCAAATATTCTTCCCTGGGGAGCAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR-3UTR CAA 90 bp GATGAGTGGGACTACCTCTGTCCACCCACAACCTTCACCATTGCTGTTATTGTTCTTTCTAATCTCCATTaGCTGGTCTCTAGTTTGGCT +
Preference number: 3 (lower is better)
Translates to: DEWDYLCPPTTFTIAVIVLSNLH*LVSSLA
Trigger: AGCCAAACTAGAGACCAGCAAATGGAGATTAGAAAG...AACAATAACAGCAATGGTGAAGGTTGTGGGTGGACAGAGGTAGTCCCACTCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR-3UTR CAA 90 bp CAGCTGCTCCCCAGGGAAGAATATTTGGAAGCAGGTAGAGCTATCCATTCCAGTAATGCAACATTTATGTaGGAGAACGAGGGAAGAAAG +
Preference number: 3 (lower is better)
Translates to: QLLPREEYLEAGRAIHSSNATFM*ENEGRK
Trigger: CTTTCTTCCCTCGTTCTCCAACATAAATGTTGCATT...ACTGGAATGGATAGCTCTACCTGCTTCCAAATATTCTTCCCTGGGGAGCAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR-3UTR CAA 90 bp GATGAGTGGGACTACCTCTGTCCACCCACAACCTTCACCATTGCTGTTATTGTTTCAAGCCTTATTCCCTaGTTGTCAATGCTTTGTACT +
Preference number: 3 (lower is better)
Translates to: DEWDYLCPPTTFTIAVIVSSLIP*LSMLCT
Trigger: AGTACAAAGCATTGACAACAAGGGAATAAGGCTTGA...AACAATAACAGCAATGGTGAAGGTTGTGGGTGGACAGAGGTAGTCCCACTCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR-3UTR CAA 90 bp TGGGTCCAAAGACCATATATGACTCTATCACCCAGGTCTAAATTGCAGTTGACAGGGTATTTGGGGTATTaGATGTGTCTCTGGGTTCTG +
Preference number: 3 (lower is better)
Translates to: WVQRPYMTLSPRSKLQLTGYLGY*MCLWVL
Trigger: CAGAACCCAGAGACACATCAAATACCCCAAATACCC...TGTCAACTGCAATTTAGACCTGGGTGATAGAGTCATATATGGTCTTTGGACCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR-3UTR CAA 90 bp GATGAGTGGGACTACCTCTGTCCACCCACAACCTTCACCATTGCTGTTATTGTTTCGCAATATTTGCAATaGTGTTTAGTCATCAGGCTG +
Preference number: 3 (lower is better)
Translates to: DEWDYLCPPTTFTIAVIVSQYLQ*CLVIRL
Trigger: CAGCCTGATGACTAAACACAATTGCAAATATTGCGA...AACAATAACAGCAATGGTGAAGGTTGTGGGTGGACAGAGGTAGTCCCACTCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR-3UTR CAA 90 bp TGGGTCCAAAGACCATATATGACTCTATCACCCAGGTCTAAATTGCAGTTGACACCATGTAGGATAGCTTaGGAACCAGACAGATTTGGC +
Preference number: 3 (lower is better)
Translates to: WVQRPYMTLSPRSKLQLTPCRIA*EPDRFG
Trigger: GCCAAATCTGTCTGGTTCCAAAGCTATCCTACATGG...TGTCAACTGCAATTTAGACCTGGGTGATAGAGTCATATATGGTCTTTGGACCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR-3UTR CAA 90 bp TCACCTAATAAATGGCAGTTTACTTCTCTTGGCTCCAGAAAAACTGGGTCACAAACTACCATGGGGTATTaGGGGTATTTGATGTGTCTC +
Preference number: 3 (lower is better)
Translates to: SPNKWQFTSLGSRKTGSQTTMGY*GYLMCL
Trigger: GAGACACATCAAATACCCCAAATACCCCATGGTAGT...TTGTGACCCAGTTTTTCTGGAGCCAAGAGAAGTAAACTGCCATTTATTAGGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR TCA 72 bp CAATACAGGAGCTTAGGGGAAAGAACTGAGAAAGTGTaGGTTAGTGATCTTTACACCTGCATTTCACAAGTG +
Preference number: 3 (lower is better)
Translates to: QYRSLGERTEKV*VSDLYTCISQV
Trigger: CACTTGTGAAATGCAGGTGTAAAGATCACTAACTCACACTTTCTCAGTTCTTTCCCCTAAGCTCCTGTATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR TCA 72 bp CCCAGGTCTAAATTGCAGTTGACACATAGAATGCAATaGATAAATCGATTCAGTAAGACTCACAGCTGCTCC +
Preference number: 3 (lower is better)
Translates to: PRSKLQLTHRMQ*INRFSKTHSCS
Trigger: GGAGCAGCTGTGAGTCTTACTGAATCGATTTATTCATTGCATTCTATGTGTCAACTGCAATTTAGACCTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR-3UTR CAA 90 bp TGGGTCCAAAGACCATATATGACTCTATCACCCAGGTCTAAATTGCAGTTGACAATAACTATAGGAAAGTaGTGGAGTGCACTTGGTCTT +
Preference number: 3 (lower is better)
Translates to: WVQRPYMTLSPRSKLQLTITIGK*WSALGL
Trigger: AAGACCAAGTGCACTCCACAACTTTCCTATAGTTAT...TGTCAACTGCAATTTAGACCTGGGTGATAGAGTCATATATGGTCTTTGGACCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR-3UTR CAA 90 bp TCACCTAATAAATGGCAGTTTACTTCTCTTGGCTCCAGAAAAACTGGGTCACAATACCAGCAATGGCACTaGAACTGGACATTGAAAATG +
Preference number: 3 (lower is better)
Translates to: SPNKWQFTSLGSRKTGSQYQQWH*NWTLKM
Trigger: CATTTTCAATGTCCAGTTCAAGTGCCATTGCTGGTA...TTGTGACCCAGTTTTTCTGGAGCCAAGAGAAGTAAACTGCCATTTATTAGGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR-3UTR CAA 90 bp TGGGTCCAAAGACCATATATGACTCTATCACCCAGGTCTAAATTGCAGTTGACAATAGAGCAGGCCTATTaGAATTTTAGTGATTATGGC +
Preference number: 3 (lower is better)
Translates to: WVQRPYMTLSPRSKLQLTIEQAY*NFSDYG
Trigger: GCCATAATCACTAAAATTCAAATAGGCCTGCTCTAT...TGTCAACTGCAATTTAGACCTGGGTGATAGAGTCATATATGGTCTTTGGACCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR-3UTR CAA 90 bp TCACCTAATAAATGGCAGTTTACTTCTCTTGGCTCCAGAAAAACTGGGTCACAACCTGATCTTTGGAAGTaGCAGCTGAAATGTGAAAAA +
Preference number: 3 (lower is better)
Translates to: SPNKWQFTSLGSRKTGSQPDLWK*QLKCEK
Trigger: TTTTTCACATTTCAGCTGCAACTTCCAAAGATCAGG...TTGTGACCCAGTTTTTCTGGAGCCAAGAGAAGTAAACTGCCATTTATTAGGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR-3UTR CAA 90 bp TGGGTCCAAAGACCATATATGACTCTATCACCCAGGTCTAAATTGCAGTTGACAGTGATGTTTTGGGAATaGAATATTTCACAGCCCAAA +
Preference number: 3 (lower is better)
Translates to: WVQRPYMTLSPRSKLQLTVMFWE*NISQPK
Trigger: TTTGGGCTGTGAAATATTCAATTCCCAAAACATCAC...TGTCAACTGCAATTTAGACCTGGGTGATAGAGTCATATATGGTCTTTGGACCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR TCA 72 bp TGTTTTAACAAAATAACTGCTTCCTCACTCTGCTTGTaGAGGGTGGCTAATTCAAGGTTATCAGTCAAGATT +
Preference number: 3 (lower is better)
Translates to: CFNKITASSLCL*RVANSRLSVKI
Trigger: AATCTTGACTGATAACCTTGAATTAGCCACCCTTCACAAGCAGAGTGAGGAAGCAGTTATTTTGTTAAAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR TCA 72 bp ATTTGGATTCTTAACTCAGCCTCTCATTCACTAGACTaGATCTTAAGGCAGTTTTTAAATTTCCCTGAGCCT +
Preference number: 3 (lower is better)
Translates to: IWILNSASHSLD*ILRQFLNFPEP
Trigger: AGGCTCAGGGAAATTTAAAAACTGCCTTAAGATTCAGTCTAGTGAATGAGAGGCTGAGTTAAGAATCCAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR TCA 72 bp AAGTTTAGAGCAAGTGAGTCAGTTAACTTCCCAAGATaGTACTGGGTTCATTCTCTCTATATGCAACAAAAT +
Preference number: 3 (lower is better)
Translates to: KFRASESVNFPR*YWVHSLYMQQN
Trigger: ATTTTGTTGCATATAGAGAGAATGAACCCAGTATCATCTTGGGAAGTTAACTGACTCACTTGCTCTAAACTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR TCA 72 bp TTGTTCTCTCTTAATCTGATTCTTCAGAATAGTTACTaGCTGTATCAACCATCAGATGCTACTAGTGAGGAA +
Preference number: 3 (lower is better)
Translates to: LFSLNLILQNSY*LYQPSDATSEE
Trigger: TTCCTCACTAGTAGCATCTGATGGTTGATACAGTCAGTAACTATTCTGAAGAATCAGATTAAGAGAGAACAA
36% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR TCA 72 bp TTTACAAATATTCACTCATTTAATCCTCTTAGTGGTTaGTACCACTCTCCCCATGTTACTGATGAGCAATCT +
Preference number: 3 (lower is better)
Translates to: FTNIHSFNPLSG*YHSPHVTDEQS
Trigger: AGATTGCTCATCAGTAACATGGGGAGAGTGGTATCAACCACTAAGAGGATTAAATGAGTGAATATTTGTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR CCA 72 bp AGAAGTTGGTTTGGAATTATAACTATAGGAAAGTTGTaGAGTGCACTTGGTCTTCAGCTTTGTTTTAACAAA +
Preference number: 3 (lower is better)
Translates to: RSWFGIITIGKL*SALGLQLCFNK
Trigger: TTTGTTAAAACAAAGCTGAAGACCAAGTGCACTCCACAACTTTCCTATAGTTATAATTCCAAACCAACTTCT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR CCA 90 bp GATGAGTGGGACTACCTCTGTCCACCCACAACCTTCACCATTGCTGTTATTGTTGGCCGGCGACCCGCGTaGGGCGGACCACTAACAGCC +
Preference number: 4 (lower is better)
Translates to: DEWDYLCPPTTFTIAVIVGRRPA*GGPLTA
Trigger: GGCTGTTAGTGGTCCGCCCCACGCGGGTCGCCGGCC...AACAATAACAGCAATGGTGAAGGTTGTGGGTGGACAGAGGTAGTCCCACTCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR CCA 90 bp CAGCTGCTCCCCAGGGAAGAATATTTGGAAGCAGGTAGAGCTATCCATTCCAGTTTGGCGCCCCCGCCCTaGGAGACCCAGGCCTGCTTC +
Preference number: 4 (lower is better)
Translates to: QLLPREEYLEAGRAIHSSLAPPP*ETQACF
Trigger: GAAGCAGGCCTGGGTCTCCCAGGGCGGGGGCGCCAA...ACTGGAATGGATAGCTCTACCTGCTTCCAAATATTCTTCCCTGGGGAGCAGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR CCA 90 bp GATGAGTGGGACTACCTCTGTCCACCCACAACCTTCACCATTGCTGTTATTGTTCGGGTGGCTCGGGCGTaGGCGCGAGTTCCGGGCCAA +
Preference number: 4 (lower is better)
Translates to: DEWDYLCPPTTFTIAVIVRVARA*ARVPGQ
Trigger: TTGGCCCGGAACTCGCGCCCACGCCCGAGCCACCCG...AACAATAACAGCAATGGTGAAGGTTGTGGGTGGACAGAGGTAGTCCCACTCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR GCA 90 bp CAGCTGCTCCCCAGGGAAGAATATTTGGAAGCAGGTAGAGCTATCCATTCCAGTCCGTCCCGAGAGGCGTaGTCACGCTTCTCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: QLLPREEYLEAGRAIHSSPSREA*SRFSWP
Trigger: GGGCCAGGAGAAGCGTGAGCACGCCTCTCGGGACGG...ACTGGAATGGATAGCTCTACCTGCTTCCAAATATTCTTCCCTGGGGAGCAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR GCA 90 bp GATGAGTGGGACTACCTCTGTCCACCCACAACCTTCACCATTGCTGTTATTGTTTGGATGCAGCGCGGGTaGAGCCTCGGGCACTCGGGC +
Preference number: 4 (lower is better)
Translates to: DEWDYLCPPTTFTIAVIVWMQRG*SLGHSG
Trigger: GCCCGAGTGCCCGAGGCTGCACCCGCGCTGCATCCA...AACAATAACAGCAATGGTGAAGGTTGTGGGTGGACAGAGGTAGTCCCACTCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR GCA 90 bp GATGAGTGGGACTACCTCTGTCCACCCACAACCTTCACCATTGCTGTTATTGTTCCCAACTCGCGTCAGTaGCCGCGTCGCCCTCAGTCG +
Preference number: 4 (lower is better)
Translates to: DEWDYLCPPTTFTIAVIVPNSRQ*PRRPQS
Trigger: CGACTGAGGGCGACGCGGGCACTGACGCGAGTTGGG...AACAATAACAGCAATGGTGAAGGTTGTGGGTGGACAGAGGTAGTCCCACTCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR GCA 90 bp CAGCTGCTCCCCAGGGAAGAATATTTGGAAGCAGGTAGAGCTATCCATTCCAGTGGAGAGCGCGCCAACTaGCATCGCAGTGGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: QLLPREEYLEAGRAIHSSGERAN*HRSGAG
Trigger: CCCAGCTCCACTGCGATGGCAGTTGGCGCGCTCTCC...ACTGGAATGGATAGCTCTACCTGCTTCCAAATATTCTTCCCTGGGGAGCAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR GCA 90 bp GATGAGTGGGACTACCTCTGTCCACCCACAACCTTCACCATTGCTGTTATTGTTTTCTCCTGGCCCGGCTaGTCTGGTGCCTGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: DEWDYLCPPTTFTIAVIVFSWPG*SGAWAS
Trigger: GCTGGCCCAGGCACCAGAGCAGCCGGGCCAGGAGAA...AACAATAACAGCAATGGTGAAGGTTGTGGGTGGACAGAGGTAGTCCCACTCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR GCA 90 bp CAGCTGCTCCCCAGGGAAGAATATTTGGAAGCAGGTAGAGCTATCCATTCCAGTTCGTGTCGACGTGGATaGAGCGCGGGTGCAGCCTCG +
Preference number: 4 (lower is better)
Translates to: QLLPREEYLEAGRAIHSSSCRRG*SAGAAS
Trigger: CGAGGCTGCACCCGCGCTGCATCCACGTCGACACGA...ACTGGAATGGATAGCTCTACCTGCTTCCAAATATTCTTCCCTGGGGAGCAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR CCA 90 bp GATGAGTGGGACTACCTCTGTCCACCCACAACCTTCACCATTGCTGTTATTGTTGATAGACCTGGCCGGTaGCAGCTGAGCCCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: DEWDYLCPPTTFTIAVIVDRPGR*QLSPLG
Trigger: CCCCAGGGGGCTCAGCTGCCACCGGCCAGGTCTATC...AACAATAACAGCAATGGTGAAGGTTGTGGGTGGACAGAGGTAGTCCCACTCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR CCA 90 bp GATGAGTGGGACTACCTCTGTCCACCCACAACCTTCACCATTGCTGTTATTGTTGGGCTAGGGCGTCTCTaGGGAGTCGCTCATCGCGCT +
Preference number: 4 (lower is better)
Translates to: DEWDYLCPPTTFTIAVIVGLGRL*GVAHRA
Trigger: AGCGCGATGAGCGACTCCCCAGAGACGCCCTAGCCC...AACAATAACAGCAATGGTGAAGGTTGTGGGTGGACAGAGGTAGTCCCACTCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR CCA 90 bp TGGGTCCAAAGACCATATATGACTCTATCACCCAGGTCTAAATTGCAGTTGACAGGGCCAATCGCGTCCTaGGCGGCTGCGGCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: WVQRPYMTLSPRSKLQLTGPIAS*AAAARA
Trigger: AGCCCTGGCCGCAGCCGCCCAGGACGCGATTGGCCC...TGTCAACTGCAATTTAGACCTGGGTGATAGAGTCATATATGGTCTTTGGACCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR CCA 90 bp CAGCTGCTCCCCAGGGAAGAATATTTGGAAGCAGGTAGAGCTATCCATTCCAGTCACTGCGGGCAGCACTaGCTCGTGTCGACGTGGATG +
Preference number: 4 (lower is better)
Translates to: QLLPREEYLEAGRAIHSSHCGQH*LVSTWM
Trigger: CATCCACGTCGACACGAGCCAGTGCTGCCCGCAGTG...ACTGGAATGGATAGCTCTACCTGCTTCCAAATATTCTTCCCTGGGGAGCAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR GCA 90 bp TGGGTCCAAAGACCATATATGACTCTATCACCCAGGTCTAAATTGCAGTTGACAGCCCACGGCCGCTCTTaGTCTTCCAGTCCCGGCCGC +
Preference number: 4 (lower is better)
Translates to: WVQRPYMTLSPRSKLQLTAHGRS*SSSPGR
Trigger: GCGGCCGGGACTGGAAGAGCAAGAGCGGCCGTGGGC...TGTCAACTGCAATTTAGACCTGGGTGATAGAGTCATATATGGTCTTTGGACCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR GCA 90 bp GATGAGTGGGACTACCTCTGTCCACCCACAACCTTCACCATTGCTGTTATTGTTCGTCCACGCAGCCCTTaGCACGGTAGTCCGGGTACA +
Preference number: 4 (lower is better)
Translates to: DEWDYLCPPTTFTIAVIVRPRSP*HGSPGT
Trigger: TGTACCCGGACTACCGTGGCAAGGGCTGCGTGGACG...AACAATAACAGCAATGGTGAAGGTTGTGGGTGGACAGAGGTAGTCCCACTCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR CCA 90 bp TGGGTCCAAAGACCATATATGACTCTATCACCCAGGTCTAAATTGCAGTTGACAGGCAGCCGGAATGTCTaGGCAGCCGTGGCGCGTCGG +
Preference number: 4 (lower is better)
Translates to: WVQRPYMTLSPRSKLQLTGSRNV*AAVARR
Trigger: CCGACGCGCCACGGCTGCCCAGACATTCCGGCTGCC...TGTCAACTGCAATTTAGACCTGGGTGATAGAGTCATATATGGTCTTTGGACCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR CCA 90 bp GATGAGTGGGACTACCTCTGTCCACCCACAACCTTCACCATTGCTGTTATTGTTCAACTGCCATCGCAGTaGAGCTGGGCATCCCCTACC +
Preference number: 4 (lower is better)
Translates to: DEWDYLCPPTTFTIAVIVQLPSQ*SWASPT
Trigger: GGTAGGGGATGCCCAGCTCCACTGCGATGGCAGTTG...AACAATAACAGCAATGGTGAAGGTTGTGGGTGGACAGAGGTAGTCCCACTCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR CCA 90 bp TCACCTAATAAATGGCAGTTTACTTCTCTTGGCTCCAGAAAAACTGGGTCACAACACGTACTCCTCGGGTaGCTCGGGCGTGGGCGCGAG +
Preference number: 4 (lower is better)
Translates to: SPNKWQFTSLGSRKTGSQHVLLG*LGRGRE
Trigger: CTCGCGCCCACGCCCGAGCCACCCGAGGAGTACGTG...TTGTGACCCAGTTTTTCTGGAGCCAAGAGAAGTAAACTGCCATTTATTAGGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR TCA 90 bp GATGAGTGGGACTACCTCTGTCCACCCACAACCTTCACCATTGCTGTTATTGTTCAGATGGGACAGCACTaGTCAGGCTCGTACACAGGG +
Preference number: 4 (lower is better)
Translates to: DEWDYLCPPTTFTIAVIVQMGQH*SGSYTG
Trigger: CCCTGTGTACGAGCCTGATCAGTGCTGTCCCATCTG...AACAATAACAGCAATGGTGAAGGTTGTGGGTGGACAGAGGTAGTCCCACTCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR GCA 90 bp CAGCTGCTCCCCAGGGAAGAATATTTGGAAGCAGGTAGAGCTATCCATTCCAGTGACACGCTGACACTGTaGATAGCACCTCACCGTTGG +
Preference number: 4 (lower is better)
Translates to: QLLPREEYLEAGRAIHSSDTLTL*IAPHRW
Trigger: CCAACGGTGAGGTGCTATGCACAGTGTCAGCGTGTC...ACTGGAATGGATAGCTCTACCTGCTTCCAAATATTCTTCCCTGGGGAGCAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR GCA 90 bp GATGAGTGGGACTACCTCTGTCCACCCACAACCTTCACCATTGCTGTTATTGTTCTCGTGCACATGGCCTaGCGCTCGATTCTCCATGTG +
Preference number: 4 (lower is better)
Translates to: DEWDYLCPPTTFTIAVIVLVHMA*RSILHV
Trigger: CACATGGAGAATCGAGCGGCAGGCCATGTGCACGAG...AACAATAACAGCAATGGTGAAGGTTGTGGGTGGACAGAGGTAGTCCCACTCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR CCA 90 bp GATGAGTGGGACTACCTCTGTCCACCCACAACCTTCACCATTGCTGTTATTGTTGCGACACCTCTCGCATaGAGACACCACGAACTCCTC +
Preference number: 4 (lower is better)
Translates to: DEWDYLCPPTTFTIAVIVATPLA*RHHELL
Trigger: GAGGAGTTCGTGGTGTCTCCATGCGAGAGGTGTCGC...AACAATAACAGCAATGGTGAAGGTTGTGGGTGGACAGAGGTAGTCCCACTCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR CCA 90 bp GATGAGTGGGACTACCTCTGTCCACCCACAACCTTCACCATTGCTGTTATTGTTTCCACACACTCCGTCTaGGGACACGCTGACACTGTG +
Preference number: 4 (lower is better)
Translates to: DEWDYLCPPTTFTIAVIVSTHSV*GHADTV
Trigger: CACAGTGTCAGCGTGTCCCCAGACGGAGTGTGTGGA...AACAATAACAGCAATGGTGAAGGTTGTGGGTGGACAGAGGTAGTCCCACTCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR TCA 90 bp CAGCTGCTCCCCAGGGAAGAATATTTGGAAGCAGGTAGAGCTATCCATTCCAGTTATGCAGGTACACGGTaGGGACGGTTGACAACACAG +
Preference number: 4 (lower is better)
Translates to: QLLPREEYLEAGRAIHSSYAGTR*GRLTTQ
Trigger: CTGTGTTGTCAACCGTCCTCACCGTGTACCTGCATA...ACTGGAATGGATAGCTCTACCTGCTTCCAAATATTCTTCCCTGGGGAGCAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR TCA 90 bp GATGAGTGGGACTACCTCTGTCCACCCACAACCTTCACCATTGCTGTTATTGTTCGTGACTCTGCCCTGTaGAAATGTGCAGGGGGAACA +
Preference number: 4 (lower is better)
Translates to: DEWDYLCPPTTFTIAVIVRDSAL*KCAGGT
Trigger: TGTTCCCCCTGCACATTTTCACAGGGCAGAGTCACG...AACAATAACAGCAATGGTGAAGGTTGTGGGTGGACAGAGGTAGTCCCACTCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR GCA 90 bp TCACCTAATAAATGGCAGTTTACTTCTCTTGGCTCCAGAAAAACTGGGTCACAAAGGCCTGCTTCAGCTTaGTCCACGGCTCACGGCCGG +
Preference number: 4 (lower is better)
Translates to: SPNKWQFTSLGSRKTGSQRPASA*STAHGR
Trigger: CCGGCCGTGAGCCGTGGAGCAAGCTGAAGCAGGCCT...TTGTGACCCAGTTTTTCTGGAGCCAAGAGAAGTAAACTGCCATTTATTAGGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR CCA 90 bp TCACCTAATAAATGGCAGTTTACTTCTCTTGGCTCCAGAAAAACTGGGTCACAATGGCTCGTGTCGACGTaGATGCAGCGCGGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: SPNKWQFTSLGSRKTGSQWLVST*MQRGCS
Trigger: GCTGCACCCGCGCTGCATCCACGTCGACACGAGCCA...TTGTGACCCAGTTTTTCTGGAGCCAAGAGAAGTAAACTGCCATTTATTAGGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR CCA 90 bp TGGGTCCAAAGACCATATATGACTCTATCACCCAGGTCTAAATTGCAGTTGACACCCCCTGGGGATGAGTaGGACTACCTCTGTCCACCC +
Preference number: 4 (lower is better)
Translates to: WVQRPYMTLSPRSKLQLTPPGDE*DYLCPP
Trigger: GGGTGGACAGAGGTAGTCCCACTCATCCCCAGGGGG...TGTCAACTGCAATTTAGACCTGGGTGATAGAGTCATATATGGTCTTTGGACCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR GCA 90 bp TCACCTAATAAATGGCAGTTTACTTCTCTTGGCTCCAGAAAAACTGGGTCACAATGGGAGACCCAGGCCTaGTTCAGCTTGCTCCACGGC +
Preference number: 4 (lower is better)
Translates to: SPNKWQFTSLGSRKTGSQWETQA*FSLLHG
Trigger: GCCGTGGAGCAAGCTGAAGCAGGCCTGGGTCTCCCA...TTGTGACCCAGTTTTTCTGGAGCCAAGAGAAGTAAACTGCCATTTATTAGGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR CAA 72 bp CATTCCAGTCCTGACTGTGCCCCATGTAGGATAGCTTaGGAACCAGACAGATTTGGCCTCAGTTCCATCACT +
Preference number: 4 (lower is better)
Translates to: HSSPDCAPCRIA*EPDRFGLSSIT
Trigger: AGTGATGGAACTGAGGCCAAATCTGTCTGGTTCCAAAGCTATCCTACATGGGGCACAGTCAGGACTGGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR TCA 90 bp CAGCTGCTCCCCAGGGAAGAATATTTGGAAGCAGGTAGAGCTATCCATTCCAGTCAGCAAAGAGTTCTCTaGCAACAGAGGGGAGGAAAA +
Preference number: 4 (lower is better)
Translates to: QLLPREEYLEAGRAIHSSQQRVL*QQRGGK
Trigger: TTTTCCTCCCCTCTGTTGTCAGAGAACTCTTTGCTG...ACTGGAATGGATAGCTCTACCTGCTTCCAAATATTCTTCCCTGGGGAGCAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR GCA 90 bp TCACCTAATAAATGGCAGTTTACTTCTCTTGGCTCCAGAAAAACTGGGTCACAAGCTTCTCCAGCGGGATaGTCGGACTGCACAGAGCCA +
Preference number: 4 (lower is better)
Translates to: SPNKWQFTSLGSRKTGSQASPAG*SDCTEP
Trigger: TGGCTCTGTGCAGTCCGAGCATCCCGCTGGAGAAGC...TTGTGACCCAGTTTTTCTGGAGCCAAGAGAAGTAAACTGCCATTTATTAGGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR GCA 90 bp TCACCTAATAAATGGCAGTTTACTTCTCTTGGCTCCAGAAAAACTGGGTCACAATTCCTCTCCTTGCACTaGGGGCAGCACTGGCTCGTG +
Preference number: 4 (lower is better)
Translates to: SPNKWQFTSLGSRKTGSQFLSLH*GQHWLV
Trigger: CACGAGCCAGTGCTGCCCGCAGTGCAAGGAGAGGAA...TTGTGACCCAGTTTTTCTGGAGCCAAGAGAAGTAAACTGCCATTTATTAGGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR GCA 90 bp TGGGTCCAAAGACCATATATGACTCTATCACCCAGGTCTAAATTGCAGTTGACACAGTCTTCACTTCTCTaGCAGCAGGGATCACCGCGG +
Preference number: 4 (lower is better)
Translates to: WVQRPYMTLSPRSKLQLTQSSLL*QQGSPR
Trigger: CCGCGGTGATCCCTGCTGGCAGAGAAGTGAAGACTG...TGTCAACTGCAATTTAGACCTGGGTGATAGAGTCATATATGGTCTTTGGACCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR GCA 90 bp CAGCTGCTCCCCAGGGAAGAATATTTGGAAGCAGGTAGAGCTATCCATTCCAGTAACTCCTATCATCTCTaGTGGAAACCAGACCCATCC +
Preference number: 4 (lower is better)
Translates to: QLLPREEYLEAGRAIHSSNSYHL*WKPDPS
Trigger: GGATGGGTCTGGTTTCCAGCAGAGATGATAGGAGTT...ACTGGAATGGATAGCTCTACCTGCTTCCAAATATTCTTCCCTGGGGAGCAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR CCA 90 bp TGGGTCCAAAGACCATATATGACTCTATCACCCAGGTCTAAATTGCAGTTGACACATGTCTCGTGCACATaGCCTGCCGCTCGATTCTCC +
Preference number: 4 (lower is better)
Translates to: WVQRPYMTLSPRSKLQLTHVSCT*PAARFS
Trigger: GGAGAATCGAGCGGCAGGCCATGTGCACGAGACATG...TGTCAACTGCAATTTAGACCTGGGTGATAGAGTCATATATGGTCTTTGGACCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR CCA 90 bp CAGCTGCTCCCCAGGGAAGAATATTTGGAAGCAGGTAGAGCTATCCATTCCAGTTTAGAGTATAGTCTGTaGTACCCAGGGCCCAGAAGT +
Preference number: 4 (lower is better)
Translates to: QLLPREEYLEAGRAIHSSLEYSL*YPGPRS
Trigger: ACTTCTGGGCCCTGGGTACCACAGACTATACTCTAA...ACTGGAATGGATAGCTCTACCTGCTTCCAAATATTCTTCCCTGGGGAGCAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR TCA 90 bp CAGCTGCTCCCCAGGGAAGAATATTTGGAAGCAGGTAGAGCTATCCATTCCAGTCACGGTGAGGACGGTTaGCAACACAGCATTTTTAAT +
Preference number: 4 (lower is better)
Translates to: QLLPREEYLEAGRAIHSSHGEDG*QHSIFN
Trigger: ATTAAAAATGCTGTGTTGTCAACCGTCCTCACCGTG...ACTGGAATGGATAGCTCTACCTGCTTCCAAATATTCTTCCCTGGGGAGCAGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR TCA 90 bp GATGAGTGGGACTACCTCTGTCCACCCACAACCTTCACCATTGCTGTTATTGTTGGAGCAATGAGAACCTaGTCTTTGGAAGTTGCAGCT +
Preference number: 4 (lower is better)
Translates to: DEWDYLCPPTTFTIAVIVGAMRT*SLEVAA
Trigger: AGCTGCAACTTCCAAAGATCAGGTTCTCATTGCTCC...AACAATAACAGCAATGGTGAAGGTTGTGGGTGGACAGAGGTAGTCCCACTCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR TCA 90 bp CAGCTGCTCCCCAGGGAAGAATATTTGGAAGCAGGTAGAGCTATCCATTCCAGTATGGGCATTCCCTTTTaGTCAGTTTGCTCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: QLLPREEYLEAGRAIHSSMGIPF*SVCSPL
Trigger: AAGAGGAGAGCAAACTGATCAAAAGGGAATGCCCAT...ACTGGAATGGATAGCTCTACCTGCTTCCAAATATTCTTCCCTGGGGAGCAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR GCA 90 bp CAGCTGCTCCCCAGGGAAGAATATTTGGAAGCAGGTAGAGCTATCCATTCCAGTGCTCGATTCTCCATGTaGCTTCCTCATAAGTACAGT +
Preference number: 4 (lower is better)
Translates to: QLLPREEYLEAGRAIHSSARFSM*LPHKYS
Trigger: ACTGTACTTATGAGGAAGGCACATGGAGAATCGAGC...ACTGGAATGGATAGCTCTACCTGCTTCCAAATATTCTTCCCTGGGGAGCAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR GCA 90 bp GATGAGTGGGACTACCTCTGTCCACCCACAACCTTCACCATTGCTGTTATTGTTGGAAGCGTCTACATTTaGCTGCATTCATGTCTCGTG +
Preference number: 4 (lower is better)
Translates to: DEWDYLCPPTTFTIAVIVGSVYI*LHSCLV
Trigger: CACGAGACATGAATGCAGGCAAATGTAGACGCTTCC...AACAATAACAGCAATGGTGAAGGTTGTGGGTGGACAGAGGTAGTCCCACTCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR GCA 90 bp CAGCTGCTCCCCAGGGAAGAATATTTGGAAGCAGGTAGAGCTATCCATTCCAGTCTGTGCCTCTCCATCTaGACTAGCTGCAACATTATA +
Preference number: 4 (lower is better)
Translates to: QLLPREEYLEAGRAIHSSLCLSI*TSCNII
Trigger: TATAATGTTGCAGCTAGTGCAGATGGAGAGGCACAG...ACTGGAATGGATAGCTCTACCTGCTTCCAAATATTCTTCCCTGGGGAGCAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR CCA 90 bp CAGCTGCTCCCCAGGGAAGAATATTTGGAAGCAGGTAGAGCTATCCATTCCAGTATAGCAGGACTTGCCTaGACTGGAGTGCATCTAATA +
Preference number: 4 (lower is better)
Translates to: QLLPREEYLEAGRAIHSSIAGLA*TGVHLI
Trigger: TATTAGATGCACTCCAGTCCAGGCAAGTCCTGCTAT...ACTGGAATGGATAGCTCTACCTGCTTCCAAATATTCTTCCCTGGGGAGCAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR CCA 90 bp CAGCTGCTCCCCAGGGAAGAATATTTGGAAGCAGGTAGAGCTATCCATTCCAGTGACTTGCACCAGAAATaGCCAATAGCTGTCAGAGTT +
Preference number: 4 (lower is better)
Translates to: QLLPREEYLEAGRAIHSSDLHQK*PIAVRV
Trigger: AACTCTGACAGCTATTGGCCATTTCTGGTGCAAGTC...ACTGGAATGGATAGCTCTACCTGCTTCCAAATATTCTTCCCTGGGGAGCAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR CCA 90 bp CAGCTGCTCCCCAGGGAAGAATATTTGGAAGCAGGTAGAGCTATCCATTCCAGTAGCATGTTCTCACCCTaGTTTCCTGAAAGCATCATG +
Preference number: 4 (lower is better)
Translates to: QLLPREEYLEAGRAIHSSSMFSP*FPESIM
Trigger: CATGATGCTTTCAGGAAACCAGGGTGAGAACATGCT...ACTGGAATGGATAGCTCTACCTGCTTCCAAATATTCTTCCCTGGGGAGCAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR TCA 90 bp CAGCTGCTCCCCAGGGAAGAATATTTGGAAGCAGGTAGAGCTATCCATTCCAGTGTTAACTTCCCAAGATaGTACTGGGTTCATTCTCTC +
Preference number: 4 (lower is better)
Translates to: QLLPREEYLEAGRAIHSSVNFPR*YWVHSL
Trigger: GAGAGAATGAACCCAGTATCATCTTGGGAAGTTAAC...ACTGGAATGGATAGCTCTACCTGCTTCCAAATATTCTTCCCTGGGGAGCAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR GCA 90 bp GATGAGTGGGACTACCTCTGTCCACCCACAACCTTCACCATTGCTGTTATTGTTTACAGTGGCATATGGTaGACTCGTCAGTCTTCACTT +
Preference number: 4 (lower is better)
Translates to: DEWDYLCPPTTFTIAVIVYSGIW*TRQSSL
Trigger: AAGTGAAGACTGACGAGTGCACCATATGCCACTGTA...AACAATAACAGCAATGGTGAAGGTTGTGGGTGGACAGAGGTAGTCCCACTCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR GCA 90 bp CAGCTGCTCCCCAGGGAAGAATATTTGGAAGCAGGTAGAGCTATCCATTCCAGTAGGCCCCCTTTTCTGTaGTATCTCCAAACCATATTA +
Preference number: 4 (lower is better)
Translates to: QLLPREEYLEAGRAIHSSRPPFL*YLQTIL
Trigger: TAATATGGTTTGGAGATAGCACAGAAAAGGGGGCCT...ACTGGAATGGATAGCTCTACCTGCTTCCAAATATTCTTCCCTGGGGAGCAGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR GCA 90 bp GATGAGTGGGACTACCTCTGTCCACCCACAACCTTCACCATTGCTGTTATTGTTAGTAAGACTCACAGCTaGTCCCCAGGGAAGAATATT +
Preference number: 4 (lower is better)
Translates to: DEWDYLCPPTTFTIAVIVSKTHS*SPGKNI
Trigger: AATATTCTTCCCTGGGGAGCAGCTGTGAGTCTTACT...AACAATAACAGCAATGGTGAAGGTTGTGGGTGGACAGAGGTAGTCCCACTCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR CCA 90 bp ACTGGAGTGCATCTAATACTTCTTGCATGCAGGGATGAAATACAAGTTTTTGAAATGTCTGGGCAGCCGTaGCGCGTCGGAGGGAAAAGA +
Preference number: 4 (lower is better)
Translates to: TGVHLILLACRDEIQVFEMSGQP*RVGGKR
Trigger: TCTTTTCCCTCCGACGCGCCACGGCTGCCCAGACAT...TTCAAAAACTTGTATTTCATCCCTGCATGCAAGAAGTATTAGATGCACTCCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR CCA 90 bp GATGAGTGGGACTACCTCTGTCCACCCACAACCTTCACCATTGCTGTTATTGTTAAGCCTTACCAGCAATaGCACTTGAACTGGACATTG +
Preference number: 4 (lower is better)
Translates to: DEWDYLCPPTTFTIAVIVKPYQQ*HLNWTL
Trigger: CAATGTCCAGTTCAAGTGCCATTGCTGGTAAGGCTT...AACAATAACAGCAATGGTGAAGGTTGTGGGTGGACAGAGGTAGTCCCACTCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR CAA 72 bp AGTGGGACTACCTCTGTCCACCCACAACCTTCACCATaGCTGTTATTGTTTGGAGTGGGGACAATCTTTGTT +
Preference number: 4 (lower is better)
Translates to: SGTTSVHPQPSP*LLLFGVGTIFV
Trigger: AACAAAGATTGTCCCCACTCCAAACAATAACAGCAATGGTGAAGGTTGTGGGTGGACAGAGGTAGTCCCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR TCA 90 bp GATGAGTGGGACTACCTCTGTCCACCCACAACCTTCACCATTGCTGTTATTGTTTCATGGTGTTGTCCATaGTCTAATTGTGAAGACACC +
Preference number: 4 (lower is better)
Translates to: DEWDYLCPPTTFTIAVIVSWCCP*SNCEDT
Trigger: GGTGTCTTCACAATTAGATCATGGACAACACCATGA...AACAATAACAGCAATGGTGAAGGTTGTGGGTGGACAGAGGTAGTCCCACTCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR TCA 90 bp TGGGTCCAAAGACCATATATGACTCTATCACCCAGGTCTAAATTGCAGTTGACAATCTGCTGGTATCCTTaGCTCAGAGCTTCATGGGTC +
Preference number: 4 (lower is better)
Translates to: WVQRPYMTLSPRSKLQLTICWYP*LRASWV
Trigger: GACCCATGAAGCTCTGAGTCAAGGATACCAGCAGAT...TGTCAACTGCAATTTAGACCTGGGTGATAGAGTCATATATGGTCTTTGGACCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR TCA 90 bp GATGAGTGGGACTACCTCTGTCCACCCACAACCTTCACCATTGCTGTTATTGTTTCTTTTCCCCTCACTTaGATTCCCTTTGGTATCTTC +
Preference number: 4 (lower is better)
Translates to: DEWDYLCPPTTFTIAVIVSFPLT*IPFGIF
Trigger: GAAGATACCAAAGGGAATTCAAGTGAGGGGAAAAGA...AACAATAACAGCAATGGTGAAGGTTGTGGGTGGACAGAGGTAGTCCCACTCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR GCA 90 bp ACTGGAGTGCATCTAATACTTCTTGCATGCAGGGATGAAATACAAGTTTTTGAAAGTTCTTCCTCTCCTTaGACTGCGGGCAGCACTGGC +
Preference number: 4 (lower is better)
Translates to: TGVHLILLACRDEIQVFESSSSP*TAGSTG
Trigger: GCCAGTGCTGCCCGCAGTGCAAGGAGAGGAAGAACT...TTCAAAAACTTGTATTTCATCCCTGCATGCAAGAAGTATTAGATGCACTCCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR GCA 90 bp TGGGTCCAAAGACCATATATGACTCTATCACCCAGGTCTAAATTGCAGTTGACAAAGTCTGATAGGTCTTaGCCCGGAACTCGCAGTAGT +
Preference number: 4 (lower is better)
Translates to: WVQRPYMTLSPRSKLQLTKSDRS*PGTRSS
Trigger: ACTACTGCGAGTTCCGGGGCAAGACCTATCAGACTT...TGTCAACTGCAATTTAGACCTGGGTGATAGAGTCATATATGGTCTTTGGACCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR GCA 90 bp GATGAGTGGGACTACCTCTGTCCACCCACAACCTTCACCATTGCTGTTATTGTTTCCATCTGCACTAGCTaGAACATTATAGCAGGACTT +
Preference number: 4 (lower is better)
Translates to: DEWDYLCPPTTFTIAVIVSICTS*NIIAGL
Trigger: AAGTCCTGCTATAATGTTGCAGCTAGTGCAGATGGA...AACAATAACAGCAATGGTGAAGGTTGTGGGTGGACAGAGGTAGTCCCACTCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR CCA 90 bp TCACCTAATAAATGGCAGTTTACTTCTCTTGGCTCCAGAAAAACTGGGTCACAAATAGCACCTCACCGTTaGCTTCACAGCGACACCTCT +
Preference number: 4 (lower is better)
Translates to: SPNKWQFTSLGSRKTGSQIAPHR*LHSDTS
Trigger: AGAGGTGTCGCTGTGAAGCCAACGGTGAGGTGCTAT...TTGTGACCCAGTTTTTCTGGAGCCAAGAGAAGTAAACTGCCATTTATTAGGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR CCA 90 bp CAGCTGCTCCCCAGGGAAGAATATTTGGAAGCAGGTAGAGCTATCCATTCCAGTGTATGTGCTTACCTATaGTGTACAATACAGGAGCTT +
Preference number: 4 (lower is better)
Translates to: QLLPREEYLEAGRAIHSSVCAYL*CTIQEL
Trigger: AAGCTCCTGTATTGTACACCATAGGTAAGCACATAC...ACTGGAATGGATAGCTCTACCTGCTTCCAAATATTCTTCCCTGGGGAGCAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR CCA 90 bp ACTGGAGTGCATCTAATACTTCTTGCATGCAGGGATGAAATACAAGTTTTTGAAGGCTCAGGCCAGGGATaGGAACAACTCACCTATGCC +
Preference number: 4 (lower is better)
Translates to: TGVHLILLACRDEIQVFEGSGQG*EQLTYA
Trigger: GGCATAGGTGAGTTGTTCCCATCCCTGGCCTGAGCC...TTCAAAAACTTGTATTTCATCCCTGCATGCAAGAAGTATTAGATGCACTCCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR CCA 90 bp CAGCTGCTCCCCAGGGAAGAATATTTGGAAGCAGGTAGAGCTATCCATTCCAGTGTTAAAAGGATGCTCTaGCCTTTGTTTCTAGAGACT +
Preference number: 4 (lower is better)
Translates to: QLLPREEYLEAGRAIHSSVKRML*PLFLET
Trigger: AGTCTCTAGAAACAAAGGCCAGAGCATCCTTTTAAC...ACTGGAATGGATAGCTCTACCTGCTTCCAAATATTCTTCCCTGGGGAGCAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR TCA 90 bp GATGAGTGGGACTACCTCTGTCCACCCACAACCTTCACCATTGCTGTTATTGTTCACCGCATGCTGATATaGTTGATAAAGGTAGAACTA +
Preference number: 4 (lower is better)
Translates to: DEWDYLCPPTTFTIAVIVHRMLI*LIKVEL
Trigger: TAGTTCTACCTTTATCAATCATATCAGCATGCGGTG...AACAATAACAGCAATGGTGAAGGTTGTGGGTGGACAGAGGTAGTCCCACTCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR TCA 90 bp GATGAGTGGGACTACCTCTGTCCACCCACAACCTTCACCATTGCTGTTATTGTTACCAGTCTTCCATGTTaGGGAGTTTGGATGTTATTT +
Preference number: 4 (lower is better)
Translates to: DEWDYLCPPTTFTIAVIVTSLPC*GVWMLF
Trigger: AAATAACATCCAAACTCCTCAACATGGAAGACTGGT...AACAATAACAGCAATGGTGAAGGTTGTGGGTGGACAGAGGTAGTCCCACTCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR TCA 90 bp GATGAGTGGGACTACCTCTGTCCACCCACAACCTTCACCATTGCTGTTATTGTTGCATGTATAGAAAGATaGCCTTCCAGCTGGAAAATT +
Preference number: 4 (lower is better)
Translates to: DEWDYLCPPTTFTIAVIVACIER*PSSWKI
Trigger: AATTTTCCAGCTGGAAGGTCATCTTTCTATACATGC...AACAATAACAGCAATGGTGAAGGTTGTGGGTGGACAGAGGTAGTCCCACTCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR GCA 90 bp ACTGGAGTGCATCTAATACTTCTTGCATGCAGGGATGAAATACAAGTTTTTGAATGCATTCATGTCTCGTaGACATGGCCTGCCGCTCGA +
Preference number: 4 (lower is better)
Translates to: TGVHLILLACRDEIQVFECIHVS*TWPAAR
Trigger: TCGAGCGGCAGGCCATGTGCACGAGACATGAATGCA...TTCAAAAACTTGTATTTCATCCCTGCATGCAAGAAGTATTAGATGCACTCCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR GCA 90 bp CAGCTGCTCCCCAGGGAAGAATATTTGGAAGCAGGTAGAGCTATCCATTCCAGTTTGCCAACAATGCAGTaGTTCTCTTGTCTTTTGTTT +
Preference number: 4 (lower is better)
Translates to: QLLPREEYLEAGRAIHSSLPTMQ*FSCLLF
Trigger: AAACAAAAGACAAGAGAAGCACTGCATTGTTGGCAA...ACTGGAATGGATAGCTCTACCTGCTTCCAAATATTCTTCCCTGGGGAGCAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR GCA 90 bp TGGGTCCAAAGACCATATATGACTCTATCACCCAGGTCTAAATTGCAGTTGACACCTTACATCCTTCACTaGTTAGGTCCAGCTTTCCGT +
Preference number: 4 (lower is better)
Translates to: WVQRPYMTLSPRSKLQLTPYILH*LGPAFR
Trigger: ACGGAAAGCTGGACCTAAGCAGTGAAGGATGTAAGG...TGTCAACTGCAATTTAGACCTGGGTGATAGAGTCATATATGGTCTTTGGACCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR CCA 90 bp CAGCTGCTCCCCAGGGAAGAATATTTGGAAGCAGGTAGAGCTATCCATTCCAGTTGCTGGTCTCTAGTTTaGCTCCTAATACAATACATT +
Preference number: 4 (lower is better)
Translates to: QLLPREEYLEAGRAIHSSCWSLV*LLIQYI
Trigger: AATGTATTGTATTAGGAGCCAAACTAGAGACCAGCA...ACTGGAATGGATAGCTCTACCTGCTTCCAAATATTCTTCCCTGGGGAGCAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR CCA 90 bp ACTGGAGTGCATCTAATACTTCTTGCATGCAGGGATGAAATACAAGTTTTTGAATGGCCCACCTACCCATaGGGGCTAGGGCCATTTATT +
Preference number: 4 (lower is better)
Translates to: TGVHLILLACRDEIQVFEWPTYP*GLGPFI
Trigger: AATAAATGGCCCTAGCCCCCATGGGTAGGTGGGCCA...TTCAAAAACTTGTATTTCATCCCTGCATGCAAGAAGTATTAGATGCACTCCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR CCA 90 bp CAGCTGCTCCCCAGGGAAGAATATTTGGAAGCAGGTAGAGCTATCCATTCCAGTATGCAACATTTATGTTaGAGAACGAGGGAAGAAAGT +
Preference number: 4 (lower is better)
Translates to: QLLPREEYLEAGRAIHSSMQHLC*RTREES
Trigger: ACTTTCTTCCCTCGTTCTCCAACATAAATGTTGCAT...ACTGGAATGGATAGCTCTACCTGCTTCCAAATATTCTTCCCTGGGGAGCAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR CCA 90 bp CAGCTGCTCCCCAGGGAAGAATATTTGGAAGCAGGTAGAGCTATCCATTCCAGTATTGCTGTTATTGTTTaGAGTGGGGACAATCTTTGT +
Preference number: 4 (lower is better)
Translates to: QLLPREEYLEAGRAIHSSIAVIV*SGDNLC
Trigger: ACAAAGATTGTCCCCACTCCAAACAATAACAGCAAT...ACTGGAATGGATAGCTCTACCTGCTTCCAAATATTCTTCCCTGGGGAGCAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR CAA 72 bp ATCAAACCTAAATTAGTTTCAAGGCTTACAGACCCCTaGATGTCAAGGACACTGTGCCTCTCCATCTGCACT +
Preference number: 4 (lower is better)
Translates to: IKPKLVSRLTDP*MSRTLCLSICT
Trigger: AGTGCAGATGGAGAGGCACAGTGTCCTTGACATCAAGGGGTCTGTAAGCCTTGAAACTAATTTAGGTTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR TCA 90 bp TCACCTAATAAATGGCAGTTTACTTCTCTTGGCTCCAGAAAAACTGGGTCACAATTGAGCTGCATGGACTaGGTCTCTAACTGCATCATG +
Preference number: 4 (lower is better)
Translates to: SPNKWQFTSLGSRKTGSQLSCMD*VSNCIM
Trigger: CATGATGCAGTTAGAGACTCAGTCCATGCAGCTCAA...TTGTGACCCAGTTTTTCTGGAGCCAAGAGAAGTAAACTGCCATTTATTAGGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR GCA 90 bp TCACCTAATAAATGGCAGTTTACTTCTCTTGGCTCCAGAAAAACTGGGTCACAAGCGTCTACATTTGCCTaGATTCATGTCTCGTGCACA +
Preference number: 4 (lower is better)
Translates to: SPNKWQFTSLGSRKTGSQASTFA*IHVSCT
Trigger: TGTGCACGAGACATGAATGCAGGCAAATGTAGACGC...TTGTGACCCAGTTTTTCTGGAGCCAAGAGAAGTAAACTGCCATTTATTAGGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR GCA 90 bp TGGGTCCAAAGACCATATATGACTCTATCACCCAGGTCTAAATTGCAGTTGACAGAACTGAAAAAGATATaGAGGTACACGGTGAGGACG +
Preference number: 4 (lower is better)
Translates to: WVQRPYMTLSPRSKLQLTELKKI*RYTVRT
Trigger: CGTCCTCACCGTGTACCTGCATATCTTTTTCAGTTC...TGTCAACTGCAATTTAGACCTGGGTGATAGAGTCATATATGGTCTTTGGACCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR GCA 90 bp TGGGTCCAAAGACCATATATGACTCTATCACCCAGGTCTAAATTGCAGTTGACATCTCTAACTGCATCATaGCTGATGGAGAGAGAAGAG +
Preference number: 4 (lower is better)
Translates to: WVQRPYMTLSPRSKLQLTSLTAS*LMEREE
Trigger: CTCTTCTCTCTCCATCAGGCATGATGCAGTTAGAGA...TGTCAACTGCAATTTAGACCTGGGTGATAGAGTCATATATGGTCTTTGGACCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR GCA 90 bp CAGCTGCTCCCCAGGGAAGAATATTTGGAAGCAGGTAGAGCTATCCATTCCAGTTTAAAAGGAATTTCTTaGCAACAATGCAGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: QLLPREEYLEAGRAIHSSLKGIS*QQCSAS
Trigger: AGAAGCACTGCATTGTTGGCAAGAAATTCCTTTTAA...ACTGGAATGGATAGCTCTACCTGCTTCCAAATATTCTTCCCTGGGGAGCAGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR CCA 90 bp TGGGTCCAAAGACCATATATGACTCTATCACCCAGGTCTAAATTGCAGTTGACAGCAGTTTACTTCTCTTaGCTCCAGAAAAACTGGGTC +
Preference number: 4 (lower is better)
Translates to: WVQRPYMTLSPRSKLQLTAVYFS*LQKNWV
Trigger: GACCCAGTTTTTCTGGAGCCAAGAGAAGTAAACTGC...TGTCAACTGCAATTTAGACCTGGGTGATAGAGTCATATATGGTCTTTGGACCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR CCA 90 bp GATGAGTGGGACTACCTCTGTCCACCCACAACCTTCACCATTGCTGTTATTGTTTCATCACCTAATAAATaGCAGTTTACTTCTCTTGGC +
Preference number: 4 (lower is better)
Translates to: DEWDYLCPPTTFTIAVIVSSPNK*QFTSLG
Trigger: GCCAAGAGAAGTAAACTGCCATTTATTAGGTGATGA...AACAATAACAGCAATGGTGAAGGTTGTGGGTGGACAGAGGTAGTCCCACTCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR CCA 90 bp CAGCTGCTCCCCAGGGAAGAATATTTGGAAGCAGGTAGAGCTATCCATTCCAGTTGTTATTGTTTGGAGTaGGGACAATCTTTGTTTTTG +
Preference number: 4 (lower is better)
Translates to: QLLPREEYLEAGRAIHSSCYCLE*GQSLFL
Trigger: CAAAAACAAAGATTGTCCCCACTCCAAACAATAACA...ACTGGAATGGATAGCTCTACCTGCTTCCAAATATTCTTCCCTGGGGAGCAGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR TCA 90 bp ACTGGAGTGCATCTAATACTTCTTGCATGCAGGGATGAAATACAAGTTTTTGAATCCTCACTCTGCTTGTaGAGGGTGGCTAATTCAAGG +
Preference number: 4 (lower is better)
Translates to: TGVHLILLACRDEIQVFESSLCL*RVANSR
Trigger: CCTTGAATTAGCCACCCTTCACAAGCAGAGTGAGGA...TTCAAAAACTTGTATTTCATCCCTGCATGCAAGAAGTATTAGATGCACTCCAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR GCA 90 bp TGGGTCCAAAGACCATATATGACTCTATCACCCAGGTCTAAATTGCAGTTGACAAGTTTGGACCATTTTTaGAGATGGGACAGCACTGAT +
Preference number: 4 (lower is better)
Translates to: WVQRPYMTLSPRSKLQLTSLDHF*RWDSTD
Trigger: ATCAGTGCTGTCCCATCTGCAAAAATGGTCCAAACT...TGTCAACTGCAATTTAGACCTGGGTGATAGAGTCATATATGGTCTTTGGACCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR GCA 90 bp ACTGGAGTGCATCTAATACTTCTTGCATGCAGGGATGAAATACAAGTTTTTGAAATGTCAAGGACACTGTaGCTCTCCATCTGCACTAGC +
Preference number: 4 (lower is better)
Translates to: TGVHLILLACRDEIQVFEMSRTL*LSICTS
Trigger: GCTAGTGCAGATGGAGAGGCACAGTGTCCTTGACAT...TTCAAAAACTTGTATTTCATCCCTGCATGCAAGAAGTATTAGATGCACTCCAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR GCA 90 bp TGGGTCCAAAGACCATATATGACTCTATCACCCAGGTCTAAATTGCAGTTGACACACAACCTTCACCATTaGTGTTATTGTTTGGAGTGG +
Preference number: 4 (lower is better)
Translates to: WVQRPYMTLSPRSKLQLTHNLHH*CYCLEW
Trigger: CCACTCCAAACAATAACAGCAATGGTGAAGGTTGTG...TGTCAACTGCAATTTAGACCTGGGTGATAGAGTCATATATGGTCTTTGGACCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR CCA 90 bp TCACCTAATAAATGGCAGTTTACTTCTCTTGGCTCCAGAAAAACTGGGTCACAATCAGAGTTTGTGTTCTaGGAAGCGTCTACATTTGCC +
Preference number: 4 (lower is better)
Translates to: SPNKWQFTSLGSRKTGSQSEFVF*EASTFA
Trigger: GGCAAATGTAGACGCTTCCCAGAACACAAACTCTGA...TTGTGACCCAGTTTTTCTGGAGCCAAGAGAAGTAAACTGCCATTTATTAGGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR CCA 90 bp TGGGTCCAAAGACCATATATGACTCTATCACCCAGGTCTAAATTGCAGTTGACAACTATAGGAAAGTTGTaGAGTGCACTTGGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: WVQRPYMTLSPRSKLQLTTIGKL*SALGLQ
Trigger: CTGAAGACCAAGTGCACTCCACAACTTTCCTATAGT...TGTCAACTGCAATTTAGACCTGGGTGATAGAGTCATATATGGTCTTTGGACCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR CCA 90 bp TGGGTCCAAAGACCATATATGACTCTATCACCCAGGTCTAAATTGCAGTTGACACTAATCTCCATTTGCTaGTCTCTAGTTTGGCTCCTA +
Preference number: 4 (lower is better)
Translates to: WVQRPYMTLSPRSKLQLTLISIC*SLVWLL
Trigger: TAGGAGCCAAACTAGAGACCAGCAAATGGAGATTAG...TGTCAACTGCAATTTAGACCTGGGTGATAGAGTCATATATGGTCTTTGGACCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR CCA 90 bp TGGGTCCAAAGACCATATATGACTCTATCACCCAGGTCTAAATTGCAGTTGACATTCCTGAAAGCATCATaGGCATTCCCTTTTGATCAG +
Preference number: 4 (lower is better)
Translates to: WVQRPYMTLSPRSKLQLTFLKAS*AFPFDQ
Trigger: CTGATCAAAAGGGAATGCCCATGATGCTTTCAGGAA...TGTCAACTGCAATTTAGACCTGGGTGATAGAGTCATATATGGTCTTTGGACCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR TCA 90 bp TGGGTCCAAAGACCATATATGACTCTATCACCCAGGTCTAAATTGCAGTTGACATTGTCTGCTTCAGCTTaGTGGAACAGTAATGCAAAT +
Preference number: 4 (lower is better)
Translates to: WVQRPYMTLSPRSKLQLTLSASA*WNSNAN
Trigger: ATTTGCATTACTGTTCCATCAAGCTGAAGCAGACAA...TGTCAACTGCAATTTAGACCTGGGTGATAGAGTCATATATGGTCTTTGGACCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR TCA 90 bp TGGGTCCAAAGACCATATATGACTCTATCACCCAGGTCTAAATTGCAGTTGACATGTAATAACAGCCATTaGGCTTTAGCTCTTAGGAGT +
Preference number: 4 (lower is better)
Translates to: WVQRPYMTLSPRSKLQLTCNNSH*ALALRS
Trigger: ACTCCTAAGAGCTAAAGCTCAATGGCTGTTATTACA...TGTCAACTGCAATTTAGACCTGGGTGATAGAGTCATATATGGTCTTTGGACCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR GCA 90 bp ACTGGAGTGCATCTAATACTTCTTGCATGCAGGGATGAAATACAAGTTTTTGAAGATCACCGCGGTTTCTaGAAAGCAGTTTGGACCATT +
Preference number: 4 (lower is better)
Translates to: TGVHLILLACRDEIQVFEDHRGF*KAVWTI
Trigger: AATGGTCCAAACTGCTTTGCAGAAACCGCGGTGATC...TTCAAAAACTTGTATTTCATCCCTGCATGCAAGAAGTATTAGATGCACTCCAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR GCA 90 bp TCACCTAATAAATGGCAGTTTACTTCTCTTGGCTCCAGAAAAACTGGGTCACAACCCTATTTTGTTGTCTaGTTCAGCTTGATGGAACAG +
Preference number: 4 (lower is better)
Translates to: SPNKWQFTSLGSRKTGSQPYFVV*FSLMEQ
Trigger: CTGTTCCATCAAGCTGAAGCAGACAACAAAATAGGG...TTGTGACCCAGTTTTTCTGGAGCCAAGAGAAGTAAACTGCCATTTATTAGGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR GCA 90 bp ACTGGAGTGCATCTAATACTTCTTGCATGCAGGGATGAAATACAAGTTTTTGAACATTATAGCAGGACTTaGCTGGACTGGAGTGCATCT +
Preference number: 4 (lower is better)
Translates to: TGVHLILLACRDEIQVFEHYSRT*LDWSAS
Trigger: AGATGCACTCCAGTCCAGGCAAGTCCTGCTATAATG...TTCAAAAACTTGTATTTCATCCCTGCATGCAAGAAGTATTAGATGCACTCCAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR GCA 90 bp TGGGTCCAAAGACCATATATGACTCTATCACCCAGGTCTAAATTGCAGTTGACAGACAAACCTCTGTTTTaGTCTATATTGCTCTGTTCC +
Preference number: 4 (lower is better)
Translates to: WVQRPYMTLSPRSKLQLTDKPLF*SILLCS
Trigger: GGAACAGAGCAATATAGAGCAAAACAGAGGTTTGTC...TGTCAACTGCAATTTAGACCTGGGTGATAGAGTCATATATGGTCTTTGGACCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR CCA 90 bp TCACCTAATAAATGGCAGTTTACTTCTCTTGGCTCCAGAAAAACTGGGTCACAATTCTGCAAAGCAGTTTaGACCATTTTTGCAGATGGG +
Preference number: 4 (lower is better)
Translates to: SPNKWQFTSLGSRKTGSQFCKAV*TIFADG
Trigger: CCCATCTGCAAAAATGGTCCAAACTGCTTTGCAGAA...TTGTGACCCAGTTTTTCTGGAGCCAAGAGAAGTAAACTGCCATTTATTAGGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR CCA 90 bp TCACCTAATAAATGGCAGTTTACTTCTCTTGGCTCCAGAAAAACTGGGTCACAATCTGCTTGTGAAGGGTaGCTAATTCAAGGTTATCAG +
Preference number: 4 (lower is better)
Translates to: SPNKWQFTSLGSRKTGSQSACEG*LIQGYQ
Trigger: CTGATAACCTTGAATTAGCCACCCTTCACAAGCAGA...TTGTGACCCAGTTTTTCTGGAGCCAAGAGAAGTAAACTGCCATTTATTAGGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR CCA 90 bp TGGGTCCAAAGACCATATATGACTCTATCACCCAGGTCTAAATTGCAGTTGACAAGCAGGACTTTGCAGTaGCTTTTTATGTTCTCTGTT +
Preference number: 4 (lower is better)
Translates to: WVQRPYMTLSPRSKLQLTSRTLQ*LFMFSV
Trigger: AACAGAGAACATAAAAAGCCACTGCAAAGTCCTGCT...TGTCAACTGCAATTTAGACCTGGGTGATAGAGTCATATATGGTCTTTGGACCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR TCA 90 bp ACTGGAGTGCATCTAATACTTCTTGCATGCAGGGATGAAATACAAGTTTTTGAACAAACAATCCATCCTTaGATAAAGGAGGGATGGCCA +
Preference number: 4 (lower is better)
Translates to: TGVHLILLACRDEIQVFEQTIHP*IKEGWP
Trigger: TGGCCATCCCTCCTTTATTCAAGGATGGATTGTTTG...TTCAAAAACTTGTATTTCATCCCTGCATGCAAGAAGTATTAGATGCACTCCAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR TCA 90 bp TGGGTCCAAAGACCATATATGACTCTATCACCCAGGTCTAAATTGCAGTTGACAACTGCAAGAAGAAGTTaGTCTTGGACAAAAATGCAA +
Preference number: 4 (lower is better)
Translates to: WVQRPYMTLSPRSKLQLTTARRS*SWTKMQ
Trigger: TTGCATTTTTGTCCAAGATCAACTTCTTCTTGCAGT...TGTCAACTGCAATTTAGACCTGGGTGATAGAGTCATATATGGTCTTTGGACCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR TCA 90 bp TGGGTCCAAAGACCATATATGACTCTATCACCCAGGTCTAAATTGCAGTTGACACTTCAGAATAGTTACTaGCTGTATCAACCATCAGAT +
Preference number: 4 (lower is better)
Translates to: WVQRPYMTLSPRSKLQLTLQNSY*LYQPSD
Trigger: ATCTGATGGTTGATACAGTCAGTAACTATTCTGAAG...TGTCAACTGCAATTTAGACCTGGGTGATAGAGTCATATATGGTCTTTGGACCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR TCA 90 bp TGGGTCCAAAGACCATATATGACTCTATCACCCAGGTCTAAATTGCAGTTGACATGTCTCTGGGTTCTGTaGCTTAGATATTTGATACTT +
Preference number: 4 (lower is better)
Translates to: WVQRPYMTLSPRSKLQLTCLWVL*LRYLIL
Trigger: AAGTATCAAATATCTAAGTCACAGAACCCAGAGACA...TGTCAACTGCAATTTAGACCTGGGTGATAGAGTCATATATGGTCTTTGGACCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR TCA 90 bp TGGGTCCAAAGACCATATATGACTCTATCACCCAGGTCTAAATTGCAGTTGACAGAATACTTTTCAGGGTaGTTGTCAGTGTCACTTAAT +
Preference number: 4 (lower is better)
Translates to: WVQRPYMTLSPRSKLQLTEYFSG*LSVSLN
Trigger: ATTAAGTGACACTGACAATCACCCTGAAAAGTATTC...TGTCAACTGCAATTTAGACCTGGGTGATAGAGTCATATATGGTCTTTGGACCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR TCA 90 bp TGGGTCCAAAGACCATATATGACTCTATCACCCAGGTCTAAATTGCAGTTGACAGGTCTAAATTGCAGTTaGCACATAGAATGCAATGAA +
Preference number: 4 (lower is better)
Translates to: WVQRPYMTLSPRSKLQLTGLNCS*HIECNE
Trigger: TTCATTGCATTCTATGTGTCAACTGCAATTTAGACC...TGTCAACTGCAATTTAGACCTGGGTGATAGAGTCATATATGGTCTTTGGACCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR GCA 90 bp ACTGGAGTGCATCTAATACTTCTTGCATGCAGGGATGAAATACAAGTTTTTGAACTTATGATCCATTCATaGGTGACTCTGCCCTGTGAA +
Preference number: 4 (lower is better)
Translates to: TGVHLILLACRDEIQVFELMIHS*VTLPCE
Trigger: TTCACAGGGCAGAGTCACGCATGAATGGATCATAAG...TTCAAAAACTTGTATTTCATCCCTGCATGCAAGAAGTATTAGATGCACTCCAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR GCA 90 bp TGGGTCCAAAGACCATATATGACTCTATCACCCAGGTCTAAATTGCAGTTGACAATTTCTTGCCAACAATaGAGTGCTTCTCTTGTCTTT +
Preference number: 4 (lower is better)
Translates to: WVQRPYMTLSPRSKLQLTISCQQ*SASLVF
Trigger: AAAGACAAGAGAAGCACTGCATTGTTGGCAAGAAAT...TGTCAACTGCAATTTAGACCTGGGTGATAGAGTCATATATGGTCTTTGGACCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR GCA 90 bp TGGGTCCAAAGACCATATATGACTCTATCACCCAGGTCTAAATTGCAGTTGACAGGCCAAAGTCTTTACTaGCAAGTTACATTAAAGCAA +
Preference number: 4 (lower is better)
Translates to: WVQRPYMTLSPRSKLQLTGQSLY*QVTLKQ
Trigger: TTGCTTTAATGTAACTTGGCAGTAAAGACTTTGGCC...TGTCAACTGCAATTTAGACCTGGGTGATAGAGTCATATATGGTCTTTGGACCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR CCA 90 bp ACTGGAGTGCATCTAATACTTCTTGCATGCAGGGATGAAATACAAGTTTTTGAAAAGTACAGTGGCATATaGTGCACTCGTCAGTCTTCA +
Preference number: 4 (lower is better)
Translates to: TGVHLILLACRDEIQVFEKYSGI*CTRQSS
Trigger: TGAAGACTGACGAGTGCACCATATGCCACTGTACTT...TTCAAAAACTTGTATTTCATCCCTGCATGCAAGAAGTATTAGATGCACTCCAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR CCA 90 bp ACTGGAGTGCATCTAATACTTCTTGCATGCAGGGATGAAATACAAGTTTTTGAAAGGACTTGCCTGGACTaGAGTGCATCTAATACTTCT +
Preference number: 4 (lower is better)
Translates to: TGVHLILLACRDEIQVFERTCLD*SASNTS
Trigger: AGAAGTATTAGATGCACTCCAGTCCAGGCAAGTCCT...TTCAAAAACTTGTATTTCATCCCTGCATGCAAGAAGTATTAGATGCACTCCAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR CCA 90 bp TCACCTAATAAATGGCAGTTTACTTCTCTTGGCTCCAGAAAAACTGGGTCACAAAAAAGACAACTGGGTTaGCAAACAGTAATGGGAGTT +
Preference number: 4 (lower is better)
Translates to: SPNKWQFTSLGSRKTGSQKRQLG*QTVMGV
Trigger: AACTCCCATTACTGTTTGCCAACCCAGTTGTCTTTT...TTGTGACCCAGTTTTTCTGGAGCCAAGAGAAGTAAACTGCCATTTATTAGGTGA
40% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR TCA 90 bp TCACCTAATAAATGGCAGTTTACTTCTCTTGGCTCCAGAAAAACTGGGTCACAAAGAACAGTTTGTTGTTaGCAATCTCAGCAAAGAGTT +
Preference number: 4 (lower is better)
Translates to: SPNKWQFTSLGSRKTGSQRTVCC*QSQQRV
Trigger: AACTCTTTGCTGAGATTGTCAACAACAAACTGTTCT...TTGTGACCCAGTTTTTCTGGAGCCAAGAGAAGTAAACTGCCATTTATTAGGTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR TCA 90 bp ACTGGAGTGCATCTAATACTTCTTGCATGCAGGGATGAAATACAAGTTTTTGAAGAAGTTGGTGTGAAGTaGGGATATGACATAAGTAGG +
Preference number: 4 (lower is better)
Translates to: TGVHLILLACRDEIQVFEEVGVK*GYDISR
Trigger: CCTACTTATGTCATATCCTCACTTCACACCAACTTC...TTCAAAAACTTGTATTTCATCCCTGCATGCAAGAAGTATTAGATGCACTCCAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR TCA 90 bp TCACCTAATAAATGGCAGTTTACTTCTCTTGGCTCCAGAAAAACTGGGTCACAATTACCCACCATATGTTaGCTTCTTCATCAATATAGC +
Preference number: 4 (lower is better)
Translates to: SPNKWQFTSLGSRKTGSQLPTIC*LLHQYS
Trigger: GCTATATTGATGAAGAAGTCAACATATGGTGGGTAA...TTGTGACCCAGTTTTTCTGGAGCCAAGAGAAGTAAACTGCCATTTATTAGGTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR GCA 90 bp TGGGTCCAAAGACCATATATGACTCTATCACCCAGGTCTAAATTGCAGTTGACACTAATACTTCTTGCATaGAGGGATGAAATACAAGTT +
Preference number: 4 (lower is better)
Translates to: WVQRPYMTLSPRSKLQLTLILLA*RDEIQV
Trigger: AACTTGTATTTCATCCCTGCATGCAAGAAGTATTAG...TGTCAACTGCAATTTAGACCTGGGTGATAGAGTCATATATGGTCTTTGGACCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR GCA 90 bp TCACCTAATAAATGGCAGTTTACTTCTCTTGGCTCCAGAAAAACTGGGTCACAACTTAGCATGTTTTACTaGACAAAGCAGGTGATGAAA +
Preference number: 4 (lower is better)
Translates to: SPNKWQFTSLGSRKTGSQLSMFY*TKQVMK
Trigger: TTTCATCACCTGCTTTGTGCAGTAAAACATGCTAAG...TTGTGACCCAGTTTTTCTGGAGCCAAGAGAAGTAAACTGCCATTTATTAGGTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR GCA 90 bp TGGGTCCAAAGACCATATATGACTCTATCACCCAGGTCTAAATTGCAGTTGACATATTTTGTGTGTGATTaGGATCCTCAAAGAATTCAG +
Preference number: 4 (lower is better)
Translates to: WVQRPYMTLSPRSKLQLTYFVCD*DPQRIQ
Trigger: CTGAATTCTTTGAGGATCGCAATCACACACAAAATA...TGTCAACTGCAATTTAGACCTGGGTGATAGAGTCATATATGGTCTTTGGACCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340652.5
3UTR CAA 72 bp TCCATCTTCTCATTAGGAAGGCTTTCTAATCTCCATTaGCTGGTCTCTAGTTTGGCTCCTAATACAATACAT +
Preference number: 4 (lower is better)
Translates to: SIFSLGRLSNLH*LVSSLAPNTIH
Trigger: ATGTATTGTATTAGGAGCCAAACTAGAGACCAGCAAATGGAGATTAGAAAGCCTTCCTAATGAGAAGATGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR GCA 90 bp TCACCTAATAAATGGCAGTTTACTTCTCTTGGCTCCAGAAAAACTGGGTCACAAATCAAGCTCCTTTATTaGACTGATGCCTATCTTAAA +
Preference number: 4 (lower is better)
Translates to: SPNKWQFTSLGSRKTGSQIKLLY*TDAYLK
Trigger: TTTAAGATAGGCATCAGTGCAATAAAGGAGCTTGAT...TTGTGACCCAGTTTTTCTGGAGCCAAGAGAAGTAAACTGCCATTTATTAGGTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR GCA 90 bp ACTGGAGTGCATCTAATACTTCTTGCATGCAGGGATGAAATACAAGTTTTTGAAGGAACAACTCACCTATaGCTTTTAACTCCTATCATC +
Preference number: 4 (lower is better)
Translates to: TGVHLILLACRDEIQVFEGTTHL*LLTPII
Trigger: GATGATAGGAGTTAAAAGGCATAGGTGAGTTGTTCC...TTCAAAAACTTGTATTTCATCCCTGCATGCAAGAAGTATTAGATGCACTCCAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR CCA 90 bp ACTGGAGTGCATCTAATACTTCTTGCATGCAGGGATGAAATACAAGTTTTTGAATGCAAAAGTTCAAAATaGCATGTGATGCCATCGCTT +
Preference number: 4 (lower is better)
Translates to: TGVHLILLACRDEIQVFECKSSK*HVMPSL
Trigger: AAGCGATGGCATCACATGCCATTTTGAACTTTTGCA...TTCAAAAACTTGTATTTCATCCCTGCATGCAAGAAGTATTAGATGCACTCCAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR GCA 90 bp ACTGGAGTGCATCTAATACTTCTTGCATGCAGGGATGAAATACAAGTTTTTGAAAGATTAGCAGGACTTTaGAGTGGCTTTTTATGTTCT +
Preference number: 4 (lower is better)
Translates to: TGVHLILLACRDEIQVFERLAGL*SGFLCS
Trigger: AGAACATAAAAAGCCACTGCAAAGTCCTGCTAATCT...TTCAAAAACTTGTATTTCATCCCTGCATGCAAGAAGTATTAGATGCACTCCAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR GCA 90 bp ACTGGAGTGCATCTAATACTTCTTGCATGCAGGGATGAAATACAAGTTTTTGAATTCATATACTTCTTATaGCAGAGACCGAAAGTCCAA +
Preference number: 4 (lower is better)
Translates to: TGVHLILLACRDEIQVFEFIYFL*QRPKVQ
Trigger: TTGGACTTTCGGTCTCTGGCATAAGAAGTATATGAA...TTCAAAAACTTGTATTTCATCCCTGCATGCAAGAAGTATTAGATGCACTCCAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR CCA 90 bp ACTGGAGTGCATCTAATACTTCTTGCATGCAGGGATGAAATACAAGTTTTTGAATGGCTCCAGAAAAACTaGGTCACAATATTTGGTTAT +
Preference number: 4 (lower is better)
Translates to: TGVHLILLACRDEIQVFEWLQKN*VTIFGY
Trigger: ATAACCAAATATTGTGACCCAGTTTTTCTGGAGCCA...TTCAAAAACTTGTATTTCATCCCTGCATGCAAGAAGTATTAGATGCACTCCAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS CCA 90 bp GGGGTAGCAGCGGCGGGCGCGGGCCCGGGTTGCCAGCGCCCATCCTaGGCCGGCCGGCGACCCGCGTGGGGCGGACCACTAACAGCCCAG +
Preference number: 5 (lower is better)
Translates to: GVAAAGAGPGCQRPS*AGRRPAWGGPLTAQ
Trigger: CTGGGCTGTTAGTGGTCCGCCCCACGCGGGTCGCCGGCCGGCCCAGGATGGGCGCTGGCAACCCGGGCCCGCGCCCGCCGCTGCTACCCC
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS CCA 90 bp GGCCCGGGTTGCCAGCGCCCATCCTGGGCCGGCCGGCGACCCGCGTaGGGCGGACCACTAACAGCCCAGCCCCACCTGCGCGCTCCGCCT +
Preference number: 5 (lower is better)
Translates to: GPGCQRPSWAGRRPA*GGPLTAQPHLRAPP
Trigger: AGGCGGAGCGCGCAGGTGGGGCTGGGCTGTTAGTGGTCCGCCCCACGCGGGTCGCCGGCCGGCCCAGGATGGGCGCTGGCAACCCGGGCC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS GCA 90 bp GCAGCCTCGGGCACTCGGGCTGCGCGCACAGCGGCCCCTCCTCGGTaGACAGGCACGGGCAGGCCGAGGGGCCCGGCGCGAACTTCTCCC +
Preference number: 5 (lower is better)
Translates to: AASGTRAARTAAPPR*TGTGRPRGPARTSP
Trigger: GGGAGAAGTTCGCGCCGGGCCCCTCGGCCTGCCCGTGCCTGTGCACCGAGGAGGGGCCGCTGTGCGCGCAGCCCGAGTGCCCGAGGCTGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS GCA 90 bp GGGCGCCCGAGCTCGTTCACCCGCCCCGGGCCGTCCCGAGAGGCGTaGTCACGCTTCTCCTGGCCCGGCTGCTCTGGTGCCTGGGCCAGC +
Preference number: 5 (lower is better)
Translates to: GRPSSFTRPGPSREA*SRFSWPGCSGAWAS
Trigger: GCTGGCCCAGGCACCAGAGCAGCCGGGCCAGGAGAAGCGTGAGCACGCCTCTCGGGACGGCCCGGGGCGGGTGAACGAGCTCGGGCGCCC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS GCA 90 bp GTGTCGACGTGGATGCAGCGCGGGTGCAGCCTCGGGCACTCGGGCTaGGCGCACAGCGGCCCCTCCTCGGTGCACAGGCACGGGCAGGCC +
Preference number: 5 (lower is better)
Translates to: VSTWMQRGCSLGHSG*AHSGPSSVHRHGQA
Trigger: GGCCTGCCCGTGCCTGTGCACCGAGGAGGGGCCGCTGTGCGCGCAGCCCGAGTGCCCGAGGCTGCACCCGCGCTGCATCCACGTCGACAC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS GCA 90 bp CACTGCGGGCAGCACTGGCTCGTGTCGACGTGGATGCAGCGCGGGTaGAGCCTCGGGCACTCGGGCTGCGCGCACAGCGGCCCCTCCTCG +
Preference number: 5 (lower is better)
Translates to: HCGQHWLVSTWMQRG*SLGHSGCAHSGPSS
Trigger: CGAGGAGGGGCCGCTGTGCGCGCAGCCCGAGTGCCCGAGGCTGCACCCGCGCTGCATCCACGTCGACACGAGCCAGTGCTGCCCGCAGTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS GCA 90 bp ATCGCGCTGTCAGCTGCCGGTAGTCGCGGCCCCAACTCGCGTCAGTaGCCGCGTCGCCCTCAGTCGCTCATCCTCCGGCCTCGTCCCCGC +
Preference number: 5 (lower is better)
Translates to: IALSAAGSRGPNSRQ*PRRPQSLILRPRPR
Trigger: GCGGGGACGAGGCCGGAGGATGAGCGACTGAGGGCGACGCGGGCACTGACGCGAGTTGGGGCCGCGACTACCGGCAGCTGACAGCGCGAT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS CCA 90 bp TGCCACGGTAGTCCGGGTACACGTACTCCTCGGGTGGCTCGGGCGTaGGCGCGAGTTCCGGGCCAATCGCGTCCTGGGCGGCTGCGGCCA +
Preference number: 5 (lower is better)
Translates to: CHGSPGTRTPRVARA*ARVPGQSRPGRLRP
Trigger: TGGCCGCAGCCGCCCAGGACGCGATTGGCCCGGAACTCGCGCCCACGCCCGAGCCACCCGAGGAGTACGTGTACCCGGACTACCGTGGCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS CCA 90 bp CACGCAGCCCTTGCCACGGTAGTCCGGGTACACGTACTCCTCGGGTaGCTCGGGCGTGGGCGCGAGTTCCGGGCCAATCGCGTCCTGGGC +
Preference number: 5 (lower is better)
Translates to: HAALATVVRVHVLLG*LGRGREFRANRVLG
Trigger: GCCCAGGACGCGATTGGCCCGGAACTCGCGCCCACGCCCGAGCCACCCGAGGAGTACGTGTACCCGGACTACCGTGGCAAGGGCTGCGTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS GCA 90 bp GTCCCGAGAGGCGTGCTCACGCTTCTCCTGGCCCGGCTGCTCTGGTaGCTGGGCCAGCTTCTCCAGCGGGATGCTCGGACTGCACAGAGC +
Preference number: 5 (lower is better)
Translates to: VPRGVLTLLLARLLW*LGQLLQRDARTAQS
Trigger: GCTCTGTGCAGTCCGAGCATCCCGCTGGAGAAGCTGGCCCAGGCACCAGAGCAGCCGGGCCAGGAGAAGCGTGAGCACGCCTCTCGGGAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS GCA 90 bp CATCAGGCAGCAGGTGACCAGGAGGGAACTGGAGAGCGCGCCAACTaGCATCGCAGTGGAGCTGGGCATCCCCTACCACGTCCCGGCGGG +
Preference number: 5 (lower is better)
Translates to: HQAAGDQEGTGERAN*HRSGAGHPLPRPGG
Trigger: CCCGCCGGGACGTGGTAGGGGATGCCCAGCTCCACTGCGATGGCAGTTGGCGCGCTCTCCAGTTCCCTCCTGGTCACCTGCTGCCTGATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS GCA 90 bp TCTCCCCGATCGCGTACACGAAGCCGCTCTCGTCCACGCAGCCCTTaGCACGGTAGTCCGGGTACACGTACTCCTCGGGTGGCTCGGGCG +
Preference number: 5 (lower is better)
Translates to: SPRSRTRSRSRPRSP*HGSPGTRTPRVARA
Trigger: CGCCCGAGCCACCCGAGGAGTACGTGTACCCGGACTACCGTGGCAAGGGCTGCGTGGACGAGAGCGGCTTCGTGTACGCGATCGGGGAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS GCA 90 bp TCTGATAGGTCTTGCCCCGGAACTCGCAGTAGTTCTTCCTCTCCTTaGACTGCGGGCAGCACTGGCTCGTGTCGACGTGGATGCAGCGCG +
Preference number: 5 (lower is better)
Translates to: SDRSCPGTRSSSSSP*TAGSTGSCRRGCSA
Trigger: CGCGCTGCATCCACGTCGACACGAGCCAGTGCTGCCCGCAGTGCAAGGAGAGGAAGAACTACTGCGAGTTCCGGGGCAAGACCTATCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS GCA 90 bp CGTACACAGGGTCCACACACTCCGTCTGGGGACACGCTGACACTGTaGATAGCACCTCACCGTTGGCTTCACAGCGACACCTCTCGCATG +
Preference number: 5 (lower is better)
Translates to: RTQGPHTPSGDTLTL*IAPHRWLHSDTSRM
Trigger: CATGCGAGAGGTGTCGCTGTGAAGCCAACGGTGAGGTGCTATGCACAGTGTCAGCGTGTCCCCAGACGGAGTGTGTGGACCCTGTGTACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS CCA 90 bp ACTCCGTCTGGGGACACGCTGACACTGTGCATAGCACCTCACCGTTaGCTTCACAGCGACACCTCTCGCATGGAGACACCACGAACTCCT +
Preference number: 5 (lower is better)
Translates to: TPSGDTLTLCIAPHR*LHSDTSRMETPRTP
Trigger: AGGAGTTCGTGGTGTCTCCATGCGAGAGGTGTCGCTGTGAAGCCAACGGTGAGGTGCTATGCACAGTGTCAGCGTGTCCCCAGACGGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS GCA 90 bp TCTCGCATGGAGACACCACGAACTCCTCCAAAGTCTGATAGGTCTTaGCCCGGAACTCGCAGTAGTTCTTCCTCTCCTTGCACTGCGGGC +
Preference number: 5 (lower is better)
Translates to: SRMETPRTPPKSDRS*PGTRSSSSSPCTAG
Trigger: GCCCGCAGTGCAAGGAGAGGAAGAACTACTGCGAGTTCCGGGGCAAGACCTATCAGACTTTGGAGGAGTTCGTGGTGTCTCCATGCGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS GCA 90 bp GCTCGATTCTCCATGTGCCTTCCTCATAAGTACAGTGGCATATGGTaGACTCGTCAGTCTTCACTTCTCTGCCAGCAGGGATCACCGCGG +
Preference number: 5 (lower is better)
Translates to: ARFSMCLPHKYSGIW*TRQSSLLCQQGSPR
Trigger: CCGCGGTGATCCCTGCTGGCAGAGAAGTGAAGACTGACGAGTGCACCATATGCCACTGTACTTATGAGGAAGGCACATGGAGAATCGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS CCA 90 bp GCCGCTCGATTCTCCATGTGCCTTCCTCATAAGTACAGTGGCATATaGTGCACTCGTCAGTCTTCACTTCTCTGCCAGCAGGGATCACCG +
Preference number: 5 (lower is better)
Translates to: AARFSMCLPHKYSGI*CTRQSSLLCQQGSP
Trigger: CGGTGATCCCTGCTGGCAGAGAAGTGAAGACTGACGAGTGCACCATATGCCACTGTACTTATGAGGAAGGCACATGGAGAATCGAGCGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR CAA 90 bp TGGGTCCAAAGACCATATATGACTCTATCACCCAGGTCTAAATTGCAGTTGACAAGCCCACGGCCGCTCTaGCTCTTCCAGTCCCGGCCG +
Preference number: 5 (lower is better)
Translates to: WVQRPYMTLSPRSKLQLTSPRPL*LFQSRP
Trigger: CGGCCGGGACTGGAAGAGCAAGAGCGGCCGTGGGCT...TGTCAACTGCAATTTAGACCTGGGTGATAGAGTCATATATGGTCTTTGGACCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR CAA 90 bp ACTGGAGTGCATCTAATACTTCTTGCATGCAGGGATGAAATACAAGTTTTTGAATGCAGATCCCCGGCCTaGGCGCCCCCGCCCTGGGAG +
Preference number: 5 (lower is better)
Translates to: TGVHLILLACRDEIQVFECRSPA*APPPWE
Trigger: CTCCCAGGGCGGGGGCGCCAAGGCCGGGGATCTGCA...TTCAAAAACTTGTATTTCATCCCTGCATGCAAGAAGTATTAGATGCACTCCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS GCA 90 bp TGCATTCATGTCTCGTGCACATGGCCTGCCGCTCGATTCTCCATGTaGCTTCCTCATAAGTACAGTGGCATATGGTGCACTCGTCAGTCT +
Preference number: 5 (lower is better)
Translates to: CIHVSCTWPAARFSM*LPHKYSGIWCTRQS
Trigger: AGACTGACGAGTGCACCATATGCCACTGTACTTATGAGGAAGGCACATGGAGAATCGAGCGGCAGGCCATGTGCACGAGACATGAATGCA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS GCA 90 bp TTTGTGTTCTGGGAAGCGTCTACATTTGCCTGCATTCATGTCTCGTaGACATGGCCTGCCGCTCGATTCTCCATGTGCCTTCCTCATAAG +
Preference number: 5 (lower is better)
Translates to: FVFWEASTFACIHVS*TWPAARFSMCLPHK
Trigger: CTTATGAGGAAGGCACATGGAGAATCGAGCGGCAGGCCATGTGCACGAGACATGAATGCAGGCAAATGTAGACGCTTCCCAGAACACAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS CCA 90 bp TTCTGGGAAGCGTCTACATTTGCCTGCATTCATGTCTCGTGCACATaGCCTGCCGCTCGATTCTCCATGTGCCTTCCTCATAAGTACAGT +
Preference number: 5 (lower is better)
Translates to: FWEASTFACIHVSCT*PAARFSMCLPHKYS
Trigger: ACTGTACTTATGAGGAAGGCACATGGAGAATCGAGCGGCAGGCCATGTGCACGAGACATGAATGCAGGCAAATGTAGACGCTTCCCAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR CAA 90 bp GATGAGTGGGACTACCTCTGTCCACCCACAACCTTCACCATTGCTGTTATTGTTAGGCTTACAGACCCCTaGATGTCAAGGACACTGTGC +
Preference number: 5 (lower is better)
Translates to: DEWDYLCPPTTFTIAVIVRLTDP*MSRTLC
Trigger: GCACAGTGTCCTTGACATCAAGGGGTCTGTAAGCCT...AACAATAACAGCAATGGTGAAGGTTGTGGGTGGACAGAGGTAGTCCCACTCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS GCA 90 bp GTTCTAGAAAAAGTCAGAGTTTGTGTTCTGGGAAGCGTCTACATTTaGCTGCATTCATGTCTCGTGCACATGGCCTGCCGCTCGATTCTC +
Preference number: 5 (lower is better)
Translates to: VLEKVRVCVLGSVYI*LHSCLVHMACRSIL
Trigger: GAGAATCGAGCGGCAGGCCATGTGCACGAGACATGAATGCAGGCAAATGTAGACGCTTCCCAGAACACAAACTCTGACTTTTTCTAGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR CAA 90 bp CAGCTGCTCCCCAGGGAAGAATATTTGGAAGCAGGTAGAGCTATCCATTCCAGTCCCAGGGAAGAATATTaGGAAGCAGGTAGAGCTATC +
Preference number: 5 (lower is better)
Translates to: QLLPREEYLEAGRAIHSSPREEY*EAGRAI
Trigger: GATAGCTCTACCTGCTTCCAAATATTCTTCCCTGGG...ACTGGAATGGATAGCTCTACCTGCTTCCAAATATTCTTCCCTGGGGAGCAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR CAA 90 bp CAGCTGCTCCCCAGGGAAGAATATTTGGAAGCAGGTAGAGCTATCCATTCCAGTTATCTGCTGGTATCCTaGACTCAGAGCTTCATGGGT +
Preference number: 5 (lower is better)
Translates to: QLLPREEYLEAGRAIHSSYLLVS*TQSFMG
Trigger: ACCCATGAAGCTCTGAGTCAAGGATACCAGCAGATA...ACTGGAATGGATAGCTCTACCTGCTTCCAAATATTCTTCCCTGGGGAGCAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR CAA 90 bp GATGAGTGGGACTACCTCTGTCCACCCACAACCTTCACCATTGCTGTTATTGTTCCACAACCTTCACCATaGCTGTTATTGTTTGGAGTG +
Preference number: 5 (lower is better)
Translates to: DEWDYLCPPTTFTIAVIVPQPSP*LLLFGV
Trigger: CACTCCAAACAATAACAGCAATGGTGAAGGTTGTGG...AACAATAACAGCAATGGTGAAGGTTGTGGGTGGACAGAGGTAGTCCCACTCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR CAA 90 bp ACTGGAGTGCATCTAATACTTCTTGCATGCAGGGATGAAATACAAGTTTTTGAACATAGCACCTCACCGTaGGCTTCACAGCGACACCTC +
Preference number: 5 (lower is better)
Translates to: TGVHLILLACRDEIQVFEHSTSP*ASQRHL
Trigger: GAGGTGTCGCTGTGAAGCCAACGGTGAGGTGCTATG...TTCAAAAACTTGTATTTCATCCCTGCATGCAAGAAGTATTAGATGCACTCCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR CAA 90 bp TGGGTCCAAAGACCATATATGACTCTATCACCCAGGTCTAAATTGCAGTTGACAGGGAAGCGTCTACATTaGCCTGCATTCATGTCTCGT +
Preference number: 5 (lower is better)
Translates to: WVQRPYMTLSPRSKLQLTGKRLH*PAFMSR
Trigger: ACGAGACATGAATGCAGGCAAATGTAGACGCTTCCC...TGTCAACTGCAATTTAGACCTGGGTGATAGAGTCATATATGGTCTTTGGACCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR CAA 90 bp GATGAGTGGGACTACCTCTGTCCACCCACAACCTTCACCATTGCTGTTATTGTTCATTGCTGTTATTGTTaGGAGTGGGGACAATCTTTG +
Preference number: 5 (lower is better)
Translates to: DEWDYLCPPTTFTIAVIVHCCYC*EWGQSL
Trigger: CAAAGATTGTCCCCACTCCAAACAATAACAGCAATG...AACAATAACAGCAATGGTGAAGGTTGTGGGTGGACAGAGGTAGTCCCACTCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR CAA 90 bp CAGCTGCTCCCCAGGGAAGAATATTTGGAAGCAGGTAGAGCTATCCATTCCAGTATAGAGCAGGCCTATTaGAATTTTAGTGATTATGGC +
Preference number: 5 (lower is better)
Translates to: QLLPREEYLEAGRAIHSSIEQAY*NFSDYG
Trigger: GCCATAATCACTAAAATTCAAATAGGCCTGCTCTAT...ACTGGAATGGATAGCTCTACCTGCTTCCAAATATTCTTCCCTGGGGAGCAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR CAA 90 bp GATGAGTGGGACTACCTCTGTCCACCCACAACCTTCACCATTGCTGTTATTGTTAATGCAACATTTATGTaGGAGAACGAGGGAAGAAAG +
Preference number: 5 (lower is better)
Translates to: DEWDYLCPPTTFTIAVIVNATFM*ENEGRK
Trigger: CTTTCTTCCCTCGTTCTCCAACATAAATGTTGCATT...AACAATAACAGCAATGGTGAAGGTTGTGGGTGGACAGAGGTAGTCCCACTCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR CAA 90 bp GATGAGTGGGACTACCTCTGTCCACCCACAACCTTCACCATTGCTGTTATTGTTCCTGATCTTTGGAAGTaGCAGCTGAAATGTGAAAAA +
Preference number: 5 (lower is better)
Translates to: DEWDYLCPPTTFTIAVIVPDLWK*QLKCEK
Trigger: TTTTTCACATTTCAGCTGCAACTTCCAAAGATCAGG...AACAATAACAGCAATGGTGAAGGTTGTGGGTGGACAGAGGTAGTCCCACTCATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR CAA 90 bp GATGAGTGGGACTACCTCTGTCCACCCACAACCTTCACCATTGCTGTTATTGTTAGTTTGGATGTTATTTaGTGTGTGATTGCGATCCTC +
Preference number: 5 (lower is better)
Translates to: DEWDYLCPPTTFTIAVIVSLDVI*CVIAIL
Trigger: GAGGATCGCAATCACACACAAAATAACATCCAAACT...AACAATAACAGCAATGGTGAAGGTTGTGGGTGGACAGAGGTAGTCCCACTCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR CAA 90 bp CAGCTGCTCCCCAGGGAAGAATATTTGGAAGCAGGTAGAGCTATCCATTCCAGTCTGTTTTGCTCTATATaGCTCTGTTCCATTTTGCTT +
Preference number: 5 (lower is better)
Translates to: QLLPREEYLEAGRAIHSSLFCSI*LCSILL
Trigger: AAGCAAAATGGAACAGAGCAATATAGAGCAAAACAG...ACTGGAATGGATAGCTCTACCTGCTTCCAAATATTCTTCCCTGGGGAGCAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR CAA 90 bp TGGGTCCAAAGACCATATATGACTCTATCACCCAGGTCTAAATTGCAGTTGACACAAAAGACAACTGGGTaGGCAAACAGTAATGGGAGT +
Preference number: 5 (lower is better)
Translates to: WVQRPYMTLSPRSKLQLTQKTTG*ANSNGS
Trigger: ACTCCCATTACTGTTTGCCAACCCAGTTGTCTTTTG...TGTCAACTGCAATTTAGACCTGGGTGATAGAGTCATATATGGTCTTTGGACCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR CAA 90 bp TGGGTCCAAAGACCATATATGACTCTATCACCCAGGTCTAAATTGCAGTTGACAACTACCATGGGGTATTaGGGGTATTTGATGTGTCTC +
Preference number: 5 (lower is better)
Translates to: WVQRPYMTLSPRSKLQLTTTMGY*GYLMCL
Trigger: GAGACACATCAAATACCCCAAATACCCCATGGTAGT...TGTCAACTGCAATTTAGACCTGGGTGATAGAGTCATATATGGTCTTTGGACCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR CAA 90 bp TCACCTAATAAATGGCAGTTTACTTCTCTTGGCTCCAGAAAAACTGGGTCACAACATGGGCATTCCCTTTaGATCAGTTTGCTCTCCTCT +
Preference number: 5 (lower is better)
Translates to: SPNKWQFTSLGSRKTGSQHGHSL*ISLLSS
Trigger: AGAGGAGAGCAAACTGATCAAAAGGGAATGCCCATG...TTGTGACCCAGTTTTTCTGGAGCCAAGAGAAGTAAACTGCCATTTATTAGGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR CAA 90 bp TGGGTCCAAAGACCATATATGACTCTATCACCCAGGTCTAAATTGCAGTTGACATTTCTGCAAAGCAGTTaGGACCATTTTTGCAGATGG +
Preference number: 5 (lower is better)
Translates to: WVQRPYMTLSPRSKLQLTFLQSS*DHFCRW
Trigger: CCATCTGCAAAAATGGTCCAAACTGCTTTGCAGAAA...TGTCAACTGCAATTTAGACCTGGGTGATAGAGTCATATATGGTCTTTGGACCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR CAA 90 bp TGGGTCCAAAGACCATATATGACTCTATCACCCAGGTCTAAATTGCAGTTGACACTTTCTAATCTCCATTaGCTGGTCTCTAGTTTGGCT +
Preference number: 5 (lower is better)
Translates to: WVQRPYMTLSPRSKLQLTLSNLH*LVSSLA
Trigger: AGCCAAACTAGAGACCAGCAAATGGAGATTAGAAAG...TGTCAACTGCAATTTAGACCTGGGTGATAGAGTCATATATGGTCTTTGGACCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR CAA 90 bp TGGGTCCAAAGACCATATATGACTCTATCACCCAGGTCTAAATTGCAGTTGACAGTACTGGTAGTTCCTTaGGCTCAAGGTGTTCTTTAT +
Preference number: 5 (lower is better)
Translates to: WVQRPYMTLSPRSKLQLTVLVVP*AQGVLY
Trigger: ATAAAGAACACCTTGAGCCAAAGGAACTACCAGTAC...TGTCAACTGCAATTTAGACCTGGGTGATAGAGTCATATATGGTCTTTGGACCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR CAA 90 bp TCACCTAATAAATGGCAGTTTACTTCTCTTGGCTCCAGAAAAACTGGGTCACAAAGGATGCTCTGGCCTTaGTTTCTAGAGACTATGTCT +
Preference number: 5 (lower is better)
Translates to: SPNKWQFTSLGSRKTGSQRMLWP*FLETMS
Trigger: AGACATAGTCTCTAGAAACAAAGGCCAGAGCATCCT...TTGTGACCCAGTTTTTCTGGAGCCAAGAGAAGTAAACTGCCATTTATTAGGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR CAA 90 bp TGGGTCCAAAGACCATATATGACTCTATCACCCAGGTCTAAATTGCAGTTGACACATCAAAAGTCTTCTTaGACTGATAGTTCCCAGAGT +
Preference number: 5 (lower is better)
Translates to: WVQRPYMTLSPRSKLQLTHQKSS*TDSSQS
Trigger: ACTCTGGGAACTATCAGTCAAAGAAGACTTTTGATG...TGTCAACTGCAATTTAGACCTGGGTGATAGAGTCATATATGGTCTTTGGACCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR CAA 90 bp TCACCTAATAAATGGCAGTTTACTTCTCTTGGCTCCAGAAAAACTGGGTCACAAAGTTGTGGAGTGCACTaGGTCTTCAGCTTTGTTTTA +
Preference number: 5 (lower is better)
Translates to: SPNKWQFTSLGSRKTGSQSCGVH*VFSFVL
Trigger: TAAAACAAAGCTGAAGACCAAGTGCACTCCACAACT...TTGTGACCCAGTTTTTCTGGAGCCAAGAGAAGTAAACTGCCATTTATTAGGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR CAA 90 bp TGGGTCCAAAGACCATATATGACTCTATCACCCAGGTCTAAATTGCAGTTGACATCAAGCCTTATTCCCTaGTTGTCAATGCTTTGTACT +
Preference number: 5 (lower is better)
Translates to: WVQRPYMTLSPRSKLQLTSSLIP*LSMLCT
Trigger: AGTACAAAGCATTGACAACAAGGGAATAAGGCTTGA...TGTCAACTGCAATTTAGACCTGGGTGATAGAGTCATATATGGTCTTTGGACCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR CAA 90 bp TGGGTCCAAAGACCATATATGACTCTATCACCCAGGTCTAAATTGCAGTTGACAAGACAAACCTCTGTTTaGCTCTATATTGCTCTGTTC +
Preference number: 5 (lower is better)
Translates to: WVQRPYMTLSPRSKLQLTRQTSV*LYIALF
Trigger: GAACAGAGCAATATAGAGCAAAACAGAGGTTTGTCT...TGTCAACTGCAATTTAGACCTGGGTGATAGAGTCATATATGGTCTTTGGACCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR CAA 90 bp TGGGTCCAAAGACCATATATGACTCTATCACCCAGGTCTAAATTGCAGTTGACACTTAAAAGGAATTTCTaGCCAACAATGCAGTGCTTC +
Preference number: 5 (lower is better)
Translates to: WVQRPYMTLSPRSKLQLTLKRNF*PTMQCF
Trigger: GAAGCACTGCATTGTTGGCAAGAAATTCCTTTTAAG...TGTCAACTGCAATTTAGACCTGGGTGATAGAGTCATATATGGTCTTTGGACCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR CAA 90 bp TCACCTAATAAATGGCAGTTTACTTCTCTTGGCTCCAGAAAAACTGGGTCACAAATAACTATAGGAAAGTaGTGGAGTGCACTTGGTCTT +
Preference number: 5 (lower is better)
Translates to: SPNKWQFTSLGSRKTGSQITIGK*WSALGL
Trigger: AAGACCAAGTGCACTCCACAACTTTCCTATAGTTAT...TTGTGACCCAGTTTTTCTGGAGCCAAGAGAAGTAAACTGCCATTTATTAGGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR CAA 90 bp TCACCTAATAAATGGCAGTTTACTTCTCTTGGCTCCAGAAAAACTGGGTCACAATCACTTGAATTCCCTTaGGTATCTTCAACACTAAGC +
Preference number: 5 (lower is better)
Translates to: SPNKWQFTSLGSRKTGSQSLEFP*VSSTLS
Trigger: GCTTAGTGTTGAAGATACCAAAGGGAATTCAAGTGA...TTGTGACCCAGTTTTTCTGGAGCCAAGAGAAGTAAACTGCCATTTATTAGGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR CAA 90 bp ACTGGAGTGCATCTAATACTTCTTGCATGCAGGGATGAAATACAAGTTTTTGAATACCAGCAATGGCACTaGAACTGGACATTGAAAATG +
Preference number: 5 (lower is better)
Translates to: TGVHLILLACRDEIQVFEYQQWH*NWTLKM
Trigger: CATTTTCAATGTCCAGTTCAAGTGCCATTGCTGGTA...TTCAAAAACTTGTATTTCATCCCTGCATGCAAGAAGTATTAGATGCACTCCAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR CAA 90 bp ACTGGAGTGCATCTAATACTTCTTGCATGCAGGGATGAAATACAAGTTTTTGAATCACCCAGGTCTAAATaGCAGTTGACACATAGAATG +
Preference number: 5 (lower is better)
Translates to: TGVHLILLACRDEIQVFESPRSK*QLTHRM
Trigger: CATTCTATGTGTCAACTGCAATTTAGACCTGGGTGA...TTCAAAAACTTGTATTTCATCCCTGCATGCAAGAAGTATTAGATGCACTCCAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS-3UTR CAA 90 bp ACTGGAGTGCATCTAATACTTCTTGCATGCAGGGATGAAATACAAGTTTTTGAATCGCAATATTTGCAATaGTGTTTAGTCATCAGGCTG +
Preference number: 5 (lower is better)
Translates to: TGVHLILLACRDEIQVFESQYLQ*CLVIRL
Trigger: CAGCCTGATGACTAAACACAATTGCAAATATTGCGA...TTCAAAAACTTGTATTTCATCCCTGCATGCAAGAAGTATTAGATGCACTCCAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS CCA 72 bp TGCCAGCGCCCATCCTGGGCCGGCCGGCGACCCGCGTaGGGCGGACCACTAACAGCCCAGCCCCACCTGCGC +
Preference number: 6 (lower is better)
Translates to: CQRPSWAGRRPA*GGPLTAQPHLR
Trigger: GCGCAGGTGGGGCTGGGCTGTTAGTGGTCCGCCCCACGCGGGTCGCCGGCCGGCCCAGGATGGGCGCTGGCA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS GCA 72 bp TCCACGGCTCACGGCCGGCGAGCCCACGGCCGCTCTTaGTCTTCCAGTCCCGGCCGCTGCCGCCCTCGTCCC +
Preference number: 6 (lower is better)
Translates to: STAHGRRAHGRS*SSSPGRCRPRP
Trigger: GGGACGAGGGCGGCAGCGGCCGGGACTGGAAGAGCAAGAGCGGCCGTGGGCTCGCCGGCCGTGAGCCGTGGA
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS CAA 72 bp CTCCACGGCTCACGGCCGGCGAGCCCACGGCCGCTCTaGCTCTTCCAGTCCCGGCCGCTGCCGCCCTCGTCC +
Preference number: 6 (lower is better)
Translates to: LHGSRPASPRPL*LFQSRPLPPSS
Trigger: GGACGAGGGCGGCAGCGGCCGGGACTGGAAGAGCAAGAGCGGCCGTGGGCTCGCCGGCCGTGAGCCGTGGAG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS GCA 72 bp TGGATGCAGCGCGGGTGCAGCCTCGGGCACTCGGGCTaGGCGCACAGCGGCCCCTCCTCGGTGCACAGGCAC +
Preference number: 6 (lower is better)
Translates to: WMQRGCSLGHSG*AHSGPSSVHRH
Trigger: GTGCCTGTGCACCGAGGAGGGGCCGCTGTGCGCGCAGCCCGAGTGCCCGAGGCTGCACCCGCGCTGCATCCA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS GCA 72 bp TGCACTGCGGGCAGCACTGGCTCGTGTCGACGTGGATaGAGCGCGGGTGCAGCCTCGGGCACTCGGGCTGCG +
Preference number: 6 (lower is better)
Translates to: CTAGSTGSCRRG*SAGAASGTRAA
Trigger: CGCAGCCCGAGTGCCCGAGGCTGCACCCGCGCTGCATCCACGTCGACACGAGCCAGTGCTGCCCGCAGTGCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS CCA 72 bp ACCACTAACAGCCCAGCCCCACCTGCGCGCTCCGCCTaGCGCGCACACCGGGCTAGGGCGTCTCTGGGGAGT +
Preference number: 6 (lower is better)
Translates to: TTNSPAPPARSA*RAHRARASLGS
Trigger: ACTCCCCAGAGACGCCCTAGCCCGGTGTGCGCGCCAGGCGGAGCGCGCAGGTGGGGCTGGGCTGTTAGTGGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS CCA 72 bp AACTGGAGAGCGCGCCAACTGCCATCGCAGTGGAGCTaGGCATCCCCTACCACGTCCCGGCGGGCGGGCGGG +
Preference number: 6 (lower is better)
Translates to: NWRARQLPSQWS*ASPTTSRRAGG
Trigger: CCCGCCCGCCCGCCGGGACGTGGTAGGGGATGCCCAGCTCCACTGCGATGGCAGTTGGCGCGCTCTCCAGTT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS GCA 72 bp TCAGCTGCCGGTAGTCGCGGCCCCAACTCGCGTCAGTaGCCGCGTCGCCCTCAGTCGCTCATCCTCCGGCCT +
Preference number: 6 (lower is better)
Translates to: SAAGSRGPNSRQ*PRRPQSLILRP
Trigger: AGGCCGGAGGATGAGCGACTGAGGGCGACGCGGGCACTGACGCGAGTTGGGGCCGCGACTACCGGCAGCTGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS CCA 72 bp GGAGGGAACTGGAGAGCGCGCCAACTGCCATCGCAGTaGAGCTGGGCATCCCCTACCACGTCCCGGCGGGCG +
Preference number: 6 (lower is better)
Translates to: GGNWRARQLPSQ*SWASPTTSRRA
Trigger: CGCCCGCCGGGACGTGGTAGGGGATGCCCAGCTCCACTGCGATGGCAGTTGGCGCGCTCTCCAGTTCCCTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS CCA 72 bp TCCTTGCACTGCGGGCAGCACTGGCTCGTGTCGACGTaGATGCAGCGCGGGTGCAGCCTCGGGCACTCGGGC +
Preference number: 6 (lower is better)
Translates to: SLHCGQHWLVST*MQRGCSLGHSG
Trigger: GCCCGAGTGCCCGAGGCTGCACCCGCGCTGCATCCACGTCGACACGAGCCAGTGCTGCCCGCAGTGCAAGGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS CCA 72 bp CTTGCCACGGTAGTCCGGGTACACGTACTCCTCGGGTaGCTCGGGCGTGGGCGCGAGTTCCGGGCCAATCGC +
Preference number: 6 (lower is better)
Translates to: LATVVRVHVLLG*LGRGREFRANR
Trigger: GCGATTGGCCCGGAACTCGCGCCCACGCCCGAGCCACCCGAGGAGTACGTGTACCCGGACTACCGTGGCAAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS CCA 72 bp TTCGGGGAGCTCTCCAGACCCGGCAGCCGGAATGTCTaGGCAGCCGTGGCGCGTCGGAGGGAAAAGAGAAGC +
Preference number: 6 (lower is better)
Translates to: FGELSRPGSRNV*AAVARRREKRS
Trigger: GCTTCTCTTTTCCCTCCGACGCGCCACGGCTGCCCAGACATTCCGGCTGCCGGGTCTGGAGAGCTCCCCGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS GCA 72 bp GCAGGTGACCAGGAGGGAACTGGAGAGCGCGCCAACTaGCATCGCAGTGGAGCTGGGCATCCCCTACCACGT +
Preference number: 6 (lower is better)
Translates to: AGDQEGTGERAN*HRSGAGHPLPR
Trigger: ACGTGGTAGGGGATGCCCAGCTCCACTGCGATGGCAGTTGGCGCGCTCTCCAGTTCCCTCCTGGTCACCTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS GCA 72 bp TCGCGTACACGAAGCCGCTCTCGTCCACGCAGCCCTTaGCACGGTAGTCCGGGTACACGTACTCCTCGGGTG +
Preference number: 6 (lower is better)
Translates to: SRTRSRSRPRSP*HGSPGTRTPRV
Trigger: CACCCGAGGAGTACGTGTACCCGGACTACCGTGGCAAGGGCTGCGTGGACGAGAGCGGCTTCGTGTACGCGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS GCA 72 bp TCTTGCCCCGGAACTCGCAGTAGTTCTTCCTCTCCTTaGACTGCGGGCAGCACTGGCTCGTGTCGACGTGGA +
Preference number: 6 (lower is better)
Translates to: SCPGTRSSSSSP*TAGSTGSCRRG
Trigger: TCCACGTCGACACGAGCCAGTGCTGCCCGCAGTGCAAGGAGAGGAAGAACTACTGCGAGTTCCGGGGCAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS GCA 72 bp GGTCCACACACTCCGTCTGGGGACACGCTGACACTGTaGATAGCACCTCACCGTTGGCTTCACAGCGACACC +
Preference number: 6 (lower is better)
Translates to: GPHTPSGDTLTL*IAPHRWLHSDT
Trigger: GGTGTCGCTGTGAAGCCAACGGTGAGGTGCTATGCACAGTGTCAGCGTGTCCCCAGACGGAGTGTGTGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS CAA 90 bp CACTCCGTCTGGGGACACGCTGACACTGTGCATAGCACCTCACCGTaGGCTTCACAGCGACACCTCTCGCATGGAGACACCACGAACTCC +
Preference number: 6 (lower is better)
Translates to: HSVWGHADTVHSTSP*ASQRHLSHGDTTNS
Trigger: GGAGTTCGTGGTGTCTCCATGCGAGAGGTGTCGCTGTGAAGCCAACGGTGAGGTGCTATGCACAGTGTCAGCGTGTCCCCAGACGGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS CCA 72 bp GGGGACACGCTGACACTGTGCATAGCACCTCACCGTTaGCTTCACAGCGACACCTCTCGCATGGAGACACCA +
Preference number: 6 (lower is better)
Translates to: GDTLTLCIAPHR*LHSDTSRMETP
Trigger: TGGTGTCTCCATGCGAGAGGTGTCGCTGTGAAGCCAACGGTGAGGTGCTATGCACAGTGTCAGCGTGTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS CAA 72 bp TGGGGACACGCTGACACTGTGCATAGCACCTCACCGTaGGCTTCACAGCGACACCTCTCGCATGGAGACACC +
Preference number: 6 (lower is better)
Translates to: WGHADTVHSTSP*ASQRHLSHGDT
Trigger: GGTGTCTCCATGCGAGAGGTGTCGCTGTGAAGCCAACGGTGAGGTGCTATGCACAGTGTCAGCGTGTCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS GCA 72 bp GAGACACCACGAACTCCTCCAAAGTCTGATAGGTCTTaGCCCGGAACTCGCAGTAGTTCTTCCTCTCCTTGC +
Preference number: 6 (lower is better)
Translates to: ETPRTPPKSDRS*PGTRSSSSSPC
Trigger: GCAAGGAGAGGAAGAACTACTGCGAGTTCCGGGGCAAGACCTATCAGACTTTGGAGGAGTTCGTGGTGTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS GCA 72 bp GTCTCGTGCACATGGCCTGCCGCTCGATTCTCCATGTaGCTTCCTCATAAGTACAGTGGCATATGGTGCACT +
Preference number: 6 (lower is better)
Translates to: VSCTWPAARFSM*LPHKYSGIWCT
Trigger: AGTGCACCATATGCCACTGTACTTATGAGGAAGGCACATGGAGAATCGAGCGGCAGGCCATGTGCACGAGAC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS GCA 72 bp TGGGAAGCGTCTACATTTGCCTGCATTCATGTCTCGTaGACATGGCCTGCCGCTCGATTCTCCATGTGCCTT +
Preference number: 6 (lower is better)
Translates to: WEASTFACIHVS*TWPAARFSMCL
Trigger: AAGGCACATGGAGAATCGAGCGGCAGGCCATGTGCACGAGACATGAATGCAGGCAAATGTAGACGCTTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS GCA 72 bp TCAGAGTTTGTGTTCTGGGAAGCGTCTACATTTGCCTaGATTCATGTCTCGTGCACATGGCCTGCCGCTCGA +
Preference number: 6 (lower is better)
Translates to: SEFVFWEASTFA*IHVSCTWPAAR
Trigger: TCGAGCGGCAGGCCATGTGCACGAGACATGAATGCAGGCAAATGTAGACGCTTCCCAGAACACAAACTCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS GCA 72 bp TCCATGTGCCTTCCTCATAAGTACAGTGGCATATGGTaGACTCGTCAGTCTTCACTTCTCTGCCAGCAGGGA +
Preference number: 6 (lower is better)
Translates to: SMCLPHKYSGIW*TRQSSLLCQQG
Trigger: TCCCTGCTGGCAGAGAAGTGAAGACTGACGAGTGCACCATATGCCACTGTACTTATGAGGAAGGCACATGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS GCA 72 bp AAAGTCAGAGTTTGTGTTCTGGGAAGCGTCTACATTTaGCTGCATTCATGTCTCGTGCACATGGCCTGCCGC +
Preference number: 6 (lower is better)
Translates to: KVRVCVLGSVYI*LHSCLVHMACR
Trigger: GCGGCAGGCCATGTGCACGAGACATGAATGCAGGCAAATGTAGACGCTTCCCAGAACACAAACTCTGACTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS CCA 72 bp TTCTCCATGTGCCTTCCTCATAAGTACAGTGGCATATaGTGCACTCGTCAGTCTTCACTTCTCTGCCAGCAG +
Preference number: 6 (lower is better)
Translates to: FSMCLPHKYSGI*CTRQSSLLCQQ
Trigger: CTGCTGGCAGAGAAGTGAAGACTGACGAGTGCACCATATGCCACTGTACTTATGAGGAAGGCACATGGAGAA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS CAA 72 bp AAAAGTCAGAGTTTGTGTTCTGGGAAGCGTCTACATTaGCCTGCATTCATGTCTCGTGCACATGGCCTGCCG +
Preference number: 6 (lower is better)
Translates to: KSQSLCSGKRLH*PAFMSRAHGLP
Trigger: CGGCAGGCCATGTGCACGAGACATGAATGCAGGCAAATGTAGACGCTTCCCAGAACACAAACTCTGACTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS CAA 90 bp TGTTCTAGAAAAAGTCAGAGTTTGTGTTCTGGGAAGCGTCTACATTaGCCTGCATTCATGTCTCGTGCACATGGCCTGCCGCTCGATTCT +
Preference number: 6 (lower is better)
Translates to: CSRKSQSLCSGKRLH*PAFMSRAHGLPLDS
Trigger: AGAATCGAGCGGCAGGCCATGTGCACGAGACATGAATGCAGGCAAATGTAGACGCTTCCCAGAACACAAACTCTGACTTTTTCTAGAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340652.5
CDS CAA 72 bp TTCACATCAGTAAAATGTTCTAGAAAAAGTCAGAGTTaGTGTTCTGGGAAGCGTCTACATTTGCCTGCATTC +
Preference number: 6 (lower is better)
Translates to: FTSVKCSRKSQS*CSGKRLHLPAF
Trigger: GAATGCAGGCAAATGTAGACGCTTCCCAGAACACAAACTCTGACTTTTTCTAGAACATTTTACTGATGTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340652.5