RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for VWA5B2 (Homo sapiens)

Ensembl gene IDs: ENSG00000145198

Ensembl transcript IDs: ENST00000273794.5, ENST00000426955.6, ENST00000461141.5, ENST00000474580.1, ENST00000493493.1, ENST00000497229.1

Found 408 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ACCCTTCCACTGTGTTGCAGGGAGCTCAGAGGATGGAGGGGAGTGTaGGTGGGGTGGGAGGAGAGGGAGAGAGCACAGGCAGGCACTTTT +
Preference number: 1 (lower is better)
Translates to: TLPLCCRELRGWRGV*VGWEERERAQAGTF
Trigger: AAAAGTGCCTGCCTGTGCTCTCTCCCTCTCCTCCCACCCCACTCACACTCCCCTCCATCCTCTGAGCTCCCTGCAACACAGTGGAAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
3UTR CCA 90 bp TTCCACTGTGTTGCAGGGAGCTCAGAGGATGGAGGGGAGTGTGAGTaGGGTGGGAGGAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTG +
Preference number: 1 (lower is better)
Translates to: FHCVAGSSEDGGECE*GGRRGREHRQALFV
Trigger: CACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTCCTCCCACCCCACTCACACTCCCCTCCATCCTCTGAGCTCCCTGCAACACAGTGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
3UTR-3UTR TCA 90 bp GAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGTGGGCGGCAGTGACTTaGGTGTGTTGGGTGGGGCGC +
Preference number: 2 (lower is better)
Translates to: ERERAQAGTFCGGKRALGWAAVT*VCWVGR
Trigger: GCGCCCCACCCAACACACTCAAGTCACTGCCGCCCA...CCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
3UTR-3UTR CCA 90 bp GAGGAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTACTTGAGTGTGTTGGGTaGGGCGCCAGCCCAAGCAGC +
Preference number: 2 (lower is better)
Translates to: EERERAQAGTFCGGKRALLECVG*GASPSS
Trigger: GCTGCTTGGGCTGGCGCCCCACCCAACACACTCAAG...TAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
3UTR-3UTR CCA 90 bp GGAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGCAGTGGGGGACAGGCTaGCACCAGCCTACACTTTCC +
Preference number: 2 (lower is better)
Translates to: GEGESTGRHFLWGQEGSRQWGTG*HQPTLS
Trigger: GGAAAGTGTAGGCTGGTGCCAGCCTGTCCCCCACTG...CCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
3UTR-3UTR CCA 90 bp AGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGAGGGAGTAAGAAGCAGTGGGCTTGAGTGTGTTGGGTaGGGCGCCAGCCCAAGCAGC +
Preference number: 2 (lower is better)
Translates to: RHFLWGQEGSREGVRSSGLECVG*GASPSS
Trigger: GCTGCTTGGGCTGGCGCCCCACCCAACACACTCAAG...CCCACTGCTTCTTACTCCCTCCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
3UTR-3UTR CCA 90 bp GAGGAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGAGTAAGAAGCAGTaGGGGACAGGCTGGCACCAG +
Preference number: 2 (lower is better)
Translates to: EERERAQAGTFCGGKRALGSKKQ*GTGWHQ
Trigger: CTGGTGCCAGCCTGTCCCCCACTGCTTCTTACTCCC...TAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
3UTR-3UTR TCA 90 bp ACTTTATTGCATAGGATTTGGGGACTGTGGCTCTCTACCCTTCCACTGTGTTGCTGGGCGGCAGTGACTTaGGTGTGTTGGGTGGGGCGC +
Preference number: 2 (lower is better)
Translates to: TLLHRIWGLWLSTLPLCCWAAVT*VCWVGR
Trigger: GCGCCCCACCCAACACACTCAAGTCACTGCCGCCCA...GCAACACAGTGGAAGGGTAGAGAGCCACAGTCCCCAAATCCTATGCAATAAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426955.6
3UTR CCA 72 bp GTTGCAGGGAGCTCAGAGGATGGAGGGGAGTGTGAGTaGGGTGGGAGGAGAGGGAGAGAGCACAGGCAGGCA +
Preference number: 3 (lower is better)
Translates to: VAGSSEDGGECE*GGRRGREHRQA
Trigger: TGCCTGCCTGTGCTCTCTCCCTCTCCTCCCACCCCACTCACACTCCCCTCCATCCTCTGAGCTCCCTGCAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
3UTR-3UTR CAA 90 bp GGAGGGGAGTGTGAGTGGGGTGGGAGGAGAGGGAGAGAGCACAGGCAGGCACTTAGTGACTTGAGTGTGTaGGGTGGGGCGCCAGCCCAA +
Preference number: 3 (lower is better)
Translates to: GGECEWGGRRGREHRQALSDLSV*GGAPAQ
Trigger: TTGGGCTGGCGCCCCACCCAACACACTCAAGTCACT...AAGTGCCTGCCTGTGCTCTCTCCCTCTCCTCCCACCCCACTCACACTCCCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
3UTR-3UTR CAA 90 bp GAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGCTGGGCGGCAGTGACTaGAGTGTGTTGGGTGGGGCG +
Preference number: 3 (lower is better)
Translates to: ERERAQAGTFCGGKRALGLGGSD*SVLGGA
Trigger: CGCCCCACCCAACACACTCAAGTCACTGCCGCCCAG...CCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
3UTR-3UTR CAA 90 bp GAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGAGAGTGACTTGAGTGTGTaGGGTGGGGCGCCAGCCCAA +
Preference number: 3 (lower is better)
Translates to: EGESTGRHFLWGQEGSRESDLSV*GGAPAQ
Trigger: TTGGGCTGGCGCCCCACCCAACACACTCAAGTCACT...CTCCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
3UTR-3UTR CAA 90 bp AGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGAGGGAGTAAGAAGCAGTGGGCTGGGCGGCAGTGACTaGAGTGTGTTGGGTGGGGCG +
Preference number: 3 (lower is better)
Translates to: RHFLWGQEGSREGVRSSGLGGSD*SVLGGA
Trigger: CGCCCCACCCAACACACTCAAGTCACTGCCGCCCAG...CCCACTGCTTCTTACTCCCTCCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
3UTR CCA 72 bp GGAGGAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTaGGGGCAAGAGGGCTCTAGGGAGGGAGTAAGAAGC +
Preference number: 3 (lower is better)
Translates to: GGEGESTGRHFL*GQEGSREGVRS
Trigger: GCTTCTTACTCCCTCCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
3UTR CCA 72 bp CTAAGAGGCACTTTATTGCATAGGATTTGGGGACTGTaGCTCTCTACCCTTCCACTGTGTTGCAGGGAGCTC +
Preference number: 3 (lower is better)
Translates to: LRGTLLHRIWGL*LSTLPLCCREL
Trigger: GAGCTCCCTGCAACACAGTGGAAGGGTAGAGAGCCACAGTCCCCAAATCCTATGCAATAAAGTGCCTCTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426955.6
CDS-3UTR TCA 90 bp GGAGGGGAGTGTGAGTGGGGTGGGAGGAGAGGGAGAGAGCACAGGCAGGCACTTGCAGCGGGCAGGGCCTaGGAACACGTCCCGAGGGGC +
Preference number: 4 (lower is better)
Translates to: GGECEWGGRRGREHRQALAAGRA*EHVPRG
Trigger: GCCCCTCGGGACGTGTTCTCAGGCCCTGCCCGCTGC...AAGTGCCTGCCTGTGCTCTCTCCCTCTCCTCCCACCCCACTCACACTCCCCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR TCA 90 bp GGAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGAGGCCGAGGTGGGGCTaGGGCTGGCGCGGTGCACGG +
Preference number: 4 (lower is better)
Translates to: GEGESTGRHFLWGQEGSRRPRWG*GWRGAR
Trigger: CCGTGCACCGCGCCAGCCTCAGCCCCACCTCGGCCT...CCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CCA 90 bp GGAGGGGAGTGTGAGTGGGGTGGGAGGAGAGGGAGAGAGCACAGGCAGGCACTTCGAGTGCTACGGCAGTaGCCCAGGTCCGGCCCCGCA +
Preference number: 4 (lower is better)
Translates to: GGECEWGGRRGREHRQALRVLRQ*PRSGPA
Trigger: TGCGGGGCCGGACCTGGGCCACTGCCGTAGCACTCG...AAGTGCCTGCCTGTGCTCTCTCCCTCTCCTCCCACCCCACTCACACTCCCCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
3UTR CAA 72 bp CCCAGCACCAAGAGGCCAGCCCTGGGCGGCAGTGACTaGAGTGTGTTGGGTGGGGCGCCAGCCCAAGCAGCA +
Preference number: 4 (lower is better)
Translates to: PSTKRPALGGSD*SVLGGAPAQAA
Trigger: TGCTGCTTGGGCTGGCGCCCCACCCAACACACTCAAGTCACTGCCGCCCAGGGCTGGCCTCTTGGTGCTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR TCA 90 bp GGAGGGGAGTGTGAGTGGGGTGGGAGGAGAGGGAGAGAGCACAGGCAGGCACTTCTGCGGCAGCCCTGCTaGGAAGGGGGCTCCAAGGGA +
Preference number: 4 (lower is better)
Translates to: GGECEWGGRRGREHRQALLRQPC*EGGSKG
Trigger: TCCCTTGGAGCCCCCTTCTCAGCAGGGCTGCCGCAG...AAGTGCCTGCCTGTGCTCTCTCCCTCTCCTCCCACCCCACTCACACTCCCCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR TCA 90 bp GGAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGACGGCGGCCCATGCTaGGCCGACAGGGAGGACGGG +
Preference number: 4 (lower is better)
Translates to: GEGESTGRHFLWGQEGSRDGGPC*ADREDG
Trigger: CCCGTCCTCCCTGTCGGCTCAGCATGGGCCGCCGTC...CCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR TCA 90 bp GAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGAGCTCGGGCTGCGGCCTTaGGGGCGGCCAGGTCAAGGC +
Preference number: 4 (lower is better)
Translates to: EGESTGRHFLWGQEGSRELGLRP*GRPGQG
Trigger: GCCTTGACCTGGCCGCCCTCAAGGCCGCAGCCCGAG...CTCCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR TCA 90 bp GGAGGAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTCTCGGGCTGCGGCCTTaGGGGCGGCCAGGTCAAGGC +
Preference number: 4 (lower is better)
Translates to: GGEGESTGRHFLWGQEGSLGLRP*GRPGQG
Trigger: GCCTTGACCTGGCCGCCCTCAAGGCCGCAGCCCGAG...AGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTCCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR GCA 90 bp GGAGGGGAGTGTGAGTGGGGTGGGAGGAGAGGGAGAGAGCACAGGCAGGCACTTAGCTGGGGGACGGGCTaGAGGAGGCCGTGGCACTGT +
Preference number: 4 (lower is better)
Translates to: GGECEWGGRRGREHRQALSWGTG*RRPWHC
Trigger: ACAGTGCCACGGCCTCCTGCAGCCCGTCCCCCAGCT...AAGTGCCTGCCTGTGCTCTCTCCCTCTCCTCCCACCCCACTCACACTCCCCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CCA 90 bp GGAGGGGAGTGTGAGTGGGGTGGGAGGAGAGGGAGAGAGCACAGGCAGGCACTTGGCCCCGGTCAGCTGTaGTCTCTGCCCCTCCTCGGA +
Preference number: 4 (lower is better)
Translates to: GGECEWGGRRGREHRQALGPGQL*SLPLLG
Trigger: TCCGAGGAGGGGCAGAGACCACAGCTGACCGGGGCC...AAGTGCCTGCCTGTGCTCTCTCCCTCTCCTCCCACCCCACTCACACTCCCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CCA 90 bp GGAGGAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGTACAGGCCGGGCATaGCGCCGGGAGGCCGGCCCT +
Preference number: 4 (lower is better)
Translates to: GGEGESTGRHFLWGQEGSSTGRA*RREAGP
Trigger: AGGGCCGGCCTCCCGGCGCCATGCCCGGCCTGTACT...AGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTCCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000426955.6
CDS-3UTR TCA 90 bp GAGGAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGCAGCGGGCAGGGCCTaGGAACACGTCCCGAGGGGC +
Preference number: 4 (lower is better)
Translates to: EERERAQAGTFCGGKRALAAGRA*EHVPRG
Trigger: GCCCCTCGGGACGTGTTCTCAGGCCCTGCCCGCTGC...TAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR TCA 90 bp ACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGAGGGAGTAAGAAGCAGGCCGAGGTGGGGCTaGGGCTGGCGCGGTGCACGG +
Preference number: 4 (lower is better)
Translates to: TGRHFLWGQEGSREGVRSRPRWG*GWRGAR
Trigger: CCGTGCACCGCGCCAGCCTCAGCCCCACCTCGGCCT...GCTTCTTACTCCCTCCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR TCA 90 bp GGAGGGGAGTGTGAGTGGGGTGGGAGGAGAGGGAGAGAGCACAGGCAGGCACTTTGGGCGGCAGTGACTTaGGTGTGTTGGGTGGGGCGC +
Preference number: 4 (lower is better)
Translates to: GGECEWGGRRGREHRQALWAAVT*VCWVGR
Trigger: GCGCCCCACCCAACACACTCAAGTCACTGCCGCCCA...AAGTGCCTGCCTGTGCTCTCTCCCTCTCCTCCCACCCCACTCACACTCCCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR GCA 90 bp GGAGGGGAGTGTGAGTGGGGTGGGAGGAGAGGGAGAGAGCACAGGCAGGCACTTAGCCTGGGGACTCACTaGTGCCTGTGGAGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: GGECEWGGRRGREHRQALSLGTH*CLWSLG
Trigger: GCCCAGGCTCCACAGGCAGCAGTGAGTCCCCAGGCT...AAGTGCCTGCCTGTGCTCTCTCCCTCTCCTCCCACCCCACTCACACTCCCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR GCA 90 bp GAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGAGCGGCAGAGGCGCTCCTaGGAGATGCGCACAGCGGCG +
Preference number: 4 (lower is better)
Translates to: EGESTGRHFLWGQEGSRERQRRS*EMRTAA
Trigger: CGCCGCTGTGCGCATCTCGCAGGAGCGCCTCTGCCG...CTCCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR GCA 90 bp GGAGGGGAGTGTGAGTGGGGTGGGAGGAGAGGGAGAGAGCACAGGCAGGCACTTCTCCAGCCAGGCGAGTaGTACGGCAGTGGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: GGECEWGGRRGREHRQALLQPGE*YGSGPG
Trigger: ACCTGGGCCACTGCCGTAGCACTCGCCTGGCTGGAG...AAGTGCCTGCCTGTGCTCTCTCCCTCTCCTCCCACCCCACTCACACTCCCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR GCA 90 bp GGAGGAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTGAGCGGCGCCGGCTCTaGAGCTGGAAGGAGACGCGC +
Preference number: 4 (lower is better)
Translates to: GGEGESTGRHFLWGQEGSERRRL*SWKETR
Trigger: GCGCGTCTCCTTCCAGCTGCAGAGCCGGCGCCGCTC...AGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTCCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000426955.6
CDS-3UTR CCA 90 bp GGAGGGGAGTGTGAGTGGGGTGGGAGGAGAGGGAGAGAGCACAGGCAGGCACTTGCAGCTGGTGGCAGGTaGGCCCCAGCCCAAAGGAGA +
Preference number: 4 (lower is better)
Translates to: GGECEWGGRRGREHRQALAAGGR*APAQRR
Trigger: TCTCCTTTGGGCTGGGGCCCACCTGCCACCAGCTGC...AAGTGCCTGCCTGTGCTCTCTCCCTCTCCTCCCACCCCACTCACACTCCCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CCA 90 bp GAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGAGAGGCTCTTGGCCCCCTaGTGGGCGGGACCGGAAGCC +
Preference number: 4 (lower is better)
Translates to: EGESTGRHFLWGQEGSRERLLAP*WAGPEA
Trigger: GGCTTCCGGTCCCGCCCACCAGGGGGCCAAGAGCCT...CTCCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CCA 90 bp GGAGGAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTGGTCGGCCGGGGACTTaGTTTGCCCGGCCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: GGEGESTGRHFLWGQEGSGRPGT*FARPGG
Trigger: CCCTCCAGGCCGGGCAAACCAAGTCCCCGGCCGACC...AGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTCCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CCA 90 bp TTTCCCAGCACCAAGAGGCCAGCCCTGGGCGGCAGTGACTTGAGTGTGTTGGGTGGTCGGCCGGGGACTTaGTTTGCCCGGCCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: FPSTKRPALGGSDLSVLGGRPGT*FARPGG
Trigger: CCCTCCAGGCCGGGCAAACCAAGTCCCCGGCCGACC...ACCCAACACACTCAAGTCACTGCCGCCCAGGGCTGGCCTCTTGGTGCTGGGAAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CCA 90 bp GGAGGAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTGGGAGGACGGGGAGGTaGGCGGCGAGGACCTTCCGT +
Preference number: 4 (lower is better)
Translates to: GGEGESTGRHFLWGQEGSGRTGR*AARTFR
Trigger: ACGGAAGGTCCTCGCCGCCCACCTCCCCGTCCTCCC...AGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTCCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CCA 90 bp GAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGAGCGAGTGCTACGGCAGTaGCCCAGGTCCGGCCCCGCA +
Preference number: 4 (lower is better)
Translates to: EGESTGRHFLWGQEGSRERVLRQ*PRSGPA
Trigger: TGCGGGGCCGGACCTGGGCCACTGCCGTAGCACTCG...CTCCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CCA 90 bp GAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGAGGCAGCGGCGTCCAGCTaGAGGGGCAGTACAGGCCGG +
Preference number: 4 (lower is better)
Translates to: EGESTGRHFLWGQEGSREAAASS*RGSTGR
Trigger: CCGGCCTGTACTGCCCCTCCAGCTGGACGCCGCTGC...CTCCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000426955.6
CDS-3UTR TCA 90 bp GGAGGGGAGTGTGAGTGGGGTGGGAGGAGAGGGAGAGAGCACAGGCAGGCACTTAGAGCCGCTCTGTGCTaGCGGCCCAGCACCTCAGTA +
Preference number: 4 (lower is better)
Translates to: GGECEWGGRRGREHRQALRAALC*RPSTSV
Trigger: TACTGAGGTGCTGGGCCGTCAGCACAGAGCGGCTCT...AAGTGCCTGCCTGTGCTCTCTCCCTCTCCTCCCACCCCACTCACACTCCCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR TCA 90 bp GAGGAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGCTCAGCGGGCTCTaGGCTGCACACCTGCAGGGC +
Preference number: 4 (lower is better)
Translates to: EERERAQAGTFCGGKRALGLSGL*AAHLQG
Trigger: GCCCTGCAGGTGTGCAGCTCAGAGCCCGCTGAGCCC...TAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR TCA 90 bp ACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGAGGGAGTAAGAAGCGACGGCGGCCCATGCTaGGCCGACAGGGAGGACGGG +
Preference number: 4 (lower is better)
Translates to: TGRHFLWGQEGSREGVRSDGGPC*ADREDG
Trigger: CCCGTCCTCCCTGTCGGCTCAGCATGGGCCGCCGTC...GCTTCTTACTCCCTCCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR TCA 90 bp GGAGGGGAGTGTGAGTGGGGTGGGAGGAGAGGGAGAGAGCACAGGCAGGCACTTGGGCTACAGAGTTTGTaGCGGCGGCCCATGCTGAGC +
Preference number: 4 (lower is better)
Translates to: GGECEWGGRRGREHRQALGLQSL*RRPMLS
Trigger: GCTCAGCATGGGCCGCCGTCACAAACTCTGTAGCCC...AAGTGCCTGCCTGTGCTCTCTCCCTCTCCTCCCACCCCACTCACACTCCCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR GCA 90 bp GGAGGAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTGACCCACCCGAGCTCTaGCAGCCAGGCTCTTGGCCC +
Preference number: 4 (lower is better)
Translates to: GGEGESTGRHFLWGQEGSDPPEL*QPGSWP
Trigger: GGGCCAAGAGCCTGGCTGGCAGAGCTCGGGTGGGTC...AGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTCCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR GCA 90 bp GGAGGGGAGTGTGAGTGGGGTGGGAGGAGAGGGAGAGAGCACAGGCAGGCACTTCCTCGGAGGGCCAGCTaGTCATTGTCCCGGACCACA +
Preference number: 4 (lower is better)
Translates to: GGECEWGGRRGREHRQALPRRAS*SLSRTT
Trigger: TGTGGTCCGGGACAATGAGCAGCTGGCCCTCCGAGG...AAGTGCCTGCCTGTGCTCTCTCCCTCTCCTCCCACCCCACTCACACTCCCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR GCA 90 bp GAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGAGGGCGCTCCTGCGAGATaGGCACAGCGGCGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: EGESTGRHFLWGQEGSREGAPAR*AQRRRR
Trigger: CCTTCTGCGCCGCTGTGCGCATCTCGCAGGAGCGCC...CTCCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR GCA 90 bp TTTCCCAGCACCAAGAGGCCAGCCCTGGGCGGCAGTGACTTGAGTGTGTTGGGTCTGAGGCTGGCGCGGTaGACGGCAAAGGGCGAGGCA +
Preference number: 4 (lower is better)
Translates to: FPSTKRPALGGSDLSVLGLRLAR*TAKGEA
Trigger: TGCCTCGCCCTTTGCCGTGCACCGCGCCAGCCTCAG...ACCCAACACACTCAAGTCACTGCCGCCCAGGGCTGGCCTCTTGGTGCTGGGAAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR GCA 90 bp GAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGAGAGCTGGGGGACGGGCTaGAGGAGGCCGTGGCACTGT +
Preference number: 4 (lower is better)
Translates to: EGESTGRHFLWGQEGSRESWGTG*RRPWHC
Trigger: ACAGTGCCACGGCCTCCTGCAGCCCGTCCCCCAGCT...CTCCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR GCA 90 bp GGAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGCAGCGGCGCATCGGTaGTCCAGCCAGGCGAGTGCT +
Preference number: 4 (lower is better)
Translates to: GEGESTGRHFLWGQEGSRAAAHR*SSQASA
Trigger: AGCACTCGCCTGGCTGGAGCACCGATGCGCCGCTGC...CCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR GCA 90 bp GAGGAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGAAGAGCCCTCGGGCTaGGGCCTTGAGGGCGGCCAG +
Preference number: 4 (lower is better)
Translates to: EERERAQAGTFCGGKRALEEPSG*GLEGGQ
Trigger: CTGGCCGCCCTCAAGGCCGCAGCCCGAGGGCTCTTC...TAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CCA 90 bp GGAGGAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTCTCTTGGCCCCCTGGTaGGCGGGACCGGAAGCCATC +
Preference number: 4 (lower is better)
Translates to: GGEGESTGRHFLWGQEGSLLAPW*AGPEAI
Trigger: GATGGCTTCCGGTCCCGCCCACCAGGGGGCCAAGAG...AGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTCCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CCA 90 bp GAGGAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAAGGCTCTTGGCCCCCTaGTGGGCGGGACCGGAAGCC +
Preference number: 4 (lower is better)
Translates to: EERERAQAGTFCGGKRALRLLAP*WAGPEA
Trigger: GGCTTCCGGTCCCGCCCACCAGGGGGCCAAGAGCCT...TAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CCA 90 bp GGAGGGGAGTGTGAGTGGGGTGGGAGGAGAGGGAGAGAGCACAGGCAGGCACTTTCTGCTCCGAGTCCCTaGCAGCCCATGGGCTGGACA +
Preference number: 4 (lower is better)
Translates to: GGECEWGGRRGREHRQALSAPSP*QPMGWT
Trigger: TGTCCAGCCCATGGGCTGCCAGGGACTCGGAGCAGA...AAGTGCCTGCCTGTGCTCTCTCCCTCTCCTCCCACCCCACTCACACTCCCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CCA 90 bp GAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGGGCCCCGGTCAGCTGTaGTCTCTGCCCCTCCTCGGA +
Preference number: 4 (lower is better)
Translates to: ERERAQAGTFCGGKRALGGPGQL*SLPLLG
Trigger: TCCGAGGAGGGGCAGAGACCACAGCTGACCGGGGCC...CCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CCA 90 bp GGAGGGGAGTGTGAGTGGGGTGGGAGGAGAGGGAGAGAGCACAGGCAGGCACTTGACCTTCCGTGGGAGTaGCAGGGTCCCCCAAAGCAC +
Preference number: 4 (lower is better)
Translates to: GGECEWGGRRGREHRQALDLPWE*QGPPKH
Trigger: GTGCTTTGGGGGACCCTGCCACTCCCACGGAAGGTC...AAGTGCCTGCCTGTGCTCTCTCCCTCTCCTCCCACCCCACTCACACTCCCCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CCA 90 bp GGAGGAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTGGCGAGGACCTTCCGTaGGAGTGGCAGGGTCCCCCA +
Preference number: 4 (lower is better)
Translates to: GGEGESTGRHFLWGQEGSGEDLP*EWQGPP
Trigger: TGGGGGACCCTGCCACTCCCACGGAAGGTCCTCGCC...AGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTCCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CCA 90 bp GAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGCAGGCGGAAGGAGCCTaGTGCCTCCTGCAGCCGCAC +
Preference number: 4 (lower is better)
Translates to: ERERAQAGTFCGGKRALGQAEGA*CLLQPH
Trigger: GTGCGGCTGCAGGAGGCACCAGGCTCCTTCCGCCTG...CCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR TCA 90 bp TTTCCCAGCACCAAGAGGCCAGCCCTGGGCGGCAGTGACTTGAGTGTGTTGGGTTCTGCCCGCAGAGCATaGGAGGGGCTCTCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: FPSTKRPALGGSDLSVLGSARRA*EGLSRP
Trigger: AGGCCTGGAGAGCCCCTCTCATGCTCTGCGGGCAGA...ACCCAACACACTCAAGTCACTGCCGCCCAGGGCTGGCCTCTTGGTGCTGGGAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR TCA 90 bp GAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGAGTCTGCCCGCAGAGCATaGGAGGGGCTCTCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: EGESTGRHFLWGQEGSRESARRA*EGLSRP
Trigger: AGGCCTGGAGAGCCCCTCTCATGCTCTGCGGGCAGA...CTCCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR TCA 90 bp GAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGCCCTGTGCCACCTCATaGGCTCCAGGGTTCGGTGGG +
Preference number: 4 (lower is better)
Translates to: ERERAQAGTFCGGKRALGPCATS*APGFGG
Trigger: CCCACCGAACCCTGGAGCTCATGAGGTGGCACAGGG...CCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR TCA 90 bp TTTCCCAGCACCAAGAGGCCAGCCCTGGGCGGCAGTGACTTGAGTGTGTTGGGTCCCTGTGCCACCTCATaGGCTCCAGGGTTCGGTGGG +
Preference number: 4 (lower is better)
Translates to: FPSTKRPALGGSDLSVLGPCATS*APGFGG
Trigger: CCCACCGAACCCTGGAGCTCATGAGGTGGCACAGGG...ACCCAACACACTCAAGTCACTGCCGCCCAGGGCTGGCCTCTTGGTGCTGGGAAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR TCA 90 bp GGAGGGGAGTGTGAGTGGGGTGGGAGGAGAGGGAGAGAGCACAGGCAGGCACTTAGGCCTGGCCTCTGCTaGGGGCAGATAAACCCTGGA +
Preference number: 4 (lower is better)
Translates to: GGECEWGGRRGREHRQALRPGLC*GQINPG
Trigger: TCCAGGGTTTATCTGCCCTCAGCAGAGGCCAGGCCT...AAGTGCCTGCCTGTGCTCTCTCCCTCTCCTCCCACCCCACTCACACTCCCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR TCA 90 bp GGAGGAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAAGTGCCCAGGGCAATaGGGCCGAGGTGGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: GGEGESTGRHFLWGQEGSKCPGQ*GRGGAE
Trigger: CTCAGCCCCACCTCGGCCTCATTGCCCTGGGCACTT...AGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR TCA 90 bp TTTCCCAGCACCAAGAGGCCAGCCCTGGGCGGCAGTGACTTGAGTGTGTTGGGTAAGTGCCCAGGGCAATaGGGCCGAGGTGGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: FPSTKRPALGGSDLSVLGKCPGQ*GRGGAE
Trigger: CTCAGCCCCACCTCGGCCTCATTGCCCTGGGCACTT...ACCCAACACACTCAAGTCACTGCCGCCCAGGGCTGGCCTCTTGGTGCTGGGAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR TCA 90 bp GAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGAGTGGGCGGCAGTGACTTaGGTGTGTTGGGTGGGGCGC +
Preference number: 4 (lower is better)
Translates to: EGESTGRHFLWGQEGSREWAAVT*VCWVGR
Trigger: GCGCCCCACCCAACACACTCAAGTCACTGCCGCCCA...CTCCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR GCA 90 bp GAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGAGCCTGGGGACTCACTaGTGCCTGTGGAGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: ERERAQAGTFCGGKRALGSLGTH*CLWSLG
Trigger: GCCCAGGCTCCACAGGCAGCAGTGAGTCCCCAGGCT...CCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR GCA 90 bp TTTCCCAGCACCAAGAGGCCAGCCCTGGGCGGCAGTGACTTGAGTGTGTTGGGTGCGGAAGGAGCCTGGTaGCTCCTGCAGCCGCACCAA +
Preference number: 4 (lower is better)
Translates to: FPSTKRPALGGSDLSVLGAEGAW*LLQPHQ
Trigger: TTGGTGCGGCTGCAGGAGGCACCAGGCTCCTTCCGC...ACCCAACACACTCAAGTCACTGCCGCCCAGGGCTGGCCTCTTGGTGCTGGGAAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR GCA 90 bp GAGGAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGCGCTCCTGCGAGATaGGCACAGCGGCGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: EERERAQAGTFCGGKRALGAPAR*AQRRRR
Trigger: CCTTCTGCGCCGCTGTGCGCATCTCGCAGGAGCGCC...TAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR GCA 90 bp ACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGAGGGAGTAAGAAGCCGGCAGAGGCGCTCCTaGGAGATGCGCACAGCGGCG +
Preference number: 4 (lower is better)
Translates to: TGRHFLWGQEGSREGVRSRQRRS*EMRTAA
Trigger: CGCCGCTGTGCGCATCTCGCAGGAGCGCCTCTGCCG...GCTTCTTACTCCCTCCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR GCA 90 bp GAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGCTCCAGCCAGGCGAGTaGTACGGCAGTGGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: ERERAQAGTFCGGKRALGLQPGE*YGSGPG
Trigger: ACCTGGGCCACTGCCGTAGCACTCGCCTGGCTGGAG...CCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR GCA 90 bp GAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGAGGCCGTCAGGCAAGTaGTGGGCCCGCAGCCAGCAA +
Preference number: 4 (lower is better)
Translates to: ERERAQAGTFCGGKRALGRPSGK*WARSQQ
Trigger: TTGCTGGCTGCGGGCCCAGCACTTGCCTGACGGCCT...CCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR GCA 90 bp GGAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGTGGGCAGGGCCACATaGAGCACCCCGTCAGGCCTT +
Preference number: 4 (lower is better)
Translates to: GEGESTGRHFLWGQEGSRVGRAT*STPSGL
Trigger: AAGGCCTGACGGGGTGCTGCATGTGGCCCTGCCCAC...CCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000426955.6
CDS-3UTR CCA 90 bp GGAGGGGAGTGTGAGTGGGGTGGGAGGAGAGGGAGAGAGCACAGGCAGGCACTTGCTGATGGGGCTCACTaGGGTGCAGCAGGATCTCCA +
Preference number: 4 (lower is better)
Translates to: GGECEWGGRRGREHRQALADGAH*GAAGSP
Trigger: TGGAGATCCTGCTGCACCCCAGTGAGCCCCATCAGC...AAGTGCCTGCCTGTGCTCTCTCCCTCTCCTCCCACCCCACTCACACTCCCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CCA 90 bp GAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGAGAGCAGCCAGCACGTCTaGGGGCCCACTCGGAACCTG +
Preference number: 4 (lower is better)
Translates to: EGESTGRHFLWGQEGSRESSQHV*GPTRNL
Trigger: CAGGTTCCGAGTGGGCCCCCAGACGTGCTGGCTGCT...CTCCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CCA 90 bp GGAGGAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGCAGCCAGCACGTCTaGGGGCCCACTCGGAACCTG +
Preference number: 4 (lower is better)
Translates to: GGEGESTGRHFLWGQEGSSSQHV*GPTRNL
Trigger: CAGGTTCCGAGTGGGCCCCCAGACGTGCTGGCTGCT...AGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CCA 90 bp ACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGAGGGAGTAAGAAGCTGCCAGCCAGGCTCTTaGCCCCCTGGTGGGCGGGAC +
Preference number: 4 (lower is better)
Translates to: TGRHFLWGQEGSREGVRSCQPGS*PPGGRD
Trigger: GTCCCGCCCACCAGGGGGCCAAGAGCCTGGCTGGCA...GCTTCTTACTCCCTCCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CCA 90 bp GGAGGAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTGCTCAGTGCCAGGGCTaGCAGCAGACGGGGCCTCTT +
Preference number: 4 (lower is better)
Translates to: GGEGESTGRHFLWGQEGSAQCQG*QQTGPL
Trigger: AAGAGGCCCCGTCTGCTGCCAGCCCTGGCACTGAGC...AGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CCA 90 bp GAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGAGGCTCAGTGCCAGGGCTaGCAGCAGACGGGGCCTCTT +
Preference number: 4 (lower is better)
Translates to: EGESTGRHFLWGQEGSREAQCQG*QQTGPL
Trigger: AAGAGGCCCCGTCTGCTGCCAGCCCTGGCACTGAGC...CTCCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CCA 90 bp GGAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGTGGGCAGCACCAACGTaGACCGGGCCTGGGCCAGAT +
Preference number: 4 (lower is better)
Translates to: GEGESTGRHFLWGQEGSRWAAPT*TGPGPD
Trigger: ATCTGGCCCAGGCCCGGTCCACGTTGGTGCTGCCCA...CCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000426955.6
CDS-3UTR CCA 90 bp GGAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGCCCCGAAGCAGCTGGTaGGGCTGTCGTCACAGAGCC +
Preference number: 4 (lower is better)
Translates to: GEGESTGRHFLWGQEGSRPRSSW*GCRHRA
Trigger: GGCTCTGTGACGACAGCCCCACCAGCTGCTTCGGGG...CCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000426955.6
CDS-3UTR TCA 90 bp TTTCCCAGCACCAAGAGGCCAGCCCTGGGCGGCAGTGACTTGAGTGTGTTGGGTGGCCCTCTGCCAGTGTaGCACAGATGGTGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: FPSTKRPALGGSDLSVLGGPLPV*HRWWLQ
Trigger: CTGCAGCCACCATCTGTGTCACACTGGCAGAGGGCC...ACCCAACACACTCAAGTCACTGCCGCCCAGGGCTGGCCTCTTGGTGCTGGGAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR TCA 90 bp GAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGAGAGCATCAGGTGTGGCTaGTGGGGCTCACTGGGGTGC +
Preference number: 4 (lower is better)
Translates to: EGESTGRHFLWGQEGSRESIRCG*WGSLGC
Trigger: GCACCCCAGTGAGCCCCATCAGCCACACCTGATGCT...CTCCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR TCA 90 bp GAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGAGGGCCTCATATTCTGCTaGGCTCAGGCTGCCGCCCTC +
Preference number: 4 (lower is better)
Translates to: EGESTGRHFLWGQEGSREGLIFC*AQAAAL
Trigger: GAGGGCGGCAGCCTGAGCTCAGCAGAATATGAGGCC...CTCCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR TCA 90 bp GGAGGAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTGGCCTCATATTCTGCTaGGCTCAGGCTGCCGCCCTC +
Preference number: 4 (lower is better)
Translates to: GGEGESTGRHFLWGQEGSGLIFC*AQAAAL
Trigger: GAGGGCGGCAGCCTGAGCTCAGCAGAATATGAGGCC...AGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR TCA 90 bp TTTCCCAGCACCAAGAGGCCAGCCCTGGGCGGCAGTGACTTGAGTGTGTTGGGTTGGGTGAGGCAGCAGTaGGCAGGAACAGCTGCCGAG +
Preference number: 4 (lower is better)
Translates to: FPSTKRPALGGSDLSVLGWVRQQ*AGTAAE
Trigger: CTCGGCAGCTGTTCCTGCTCACTGCTGCCTCACCCA...ACCCAACACACTCAAGTCACTGCCGCCCAGGGCTGGCCTCTTGGTGCTGGGAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR TCA 90 bp GGAGGGGAGTGTGAGTGGGGTGGGAGGAGAGGGAGAGAGCACAGGCAGGCACTTTGGGTCCAGGATCCGTaGCTGGGTCTGTCAGAGCAT +
Preference number: 4 (lower is better)
Translates to: GGECEWGGRRGREHRQALWVQDP*LGLSEH
Trigger: ATGCTCTGACAGACCCAGTCACGGATCCTGGACCCA...AAGTGCCTGCCTGTGCTCTCTCCCTCTCCTCCCACCCCACTCACACTCCCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR GCA 90 bp GAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGCTTCCTCCTGAAGGCTaGCCACCCCGAAGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: ERERAQAGTFCGGKRALGLPPEG*PPRSSW
Trigger: CCAGCTGCTTCGGGGTGGGCAGCCTTCAGGAGGAAG...CCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR GCA 90 bp GAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGTGGGGCTCACTGGGGTaGAGCAGGATCTCCAAGGCC +
Preference number: 4 (lower is better)
Translates to: ERERAQAGTFCGGKRALGWGSLG*SRISKA
Trigger: GGCCTTGGAGATCCTGCTGCACCCCAGTGAGCCCCA...CCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR GCA 90 bp GGAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGCTGGCTGTCCCCCTGTaGCACCTCATGAGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: GEGESTGRHFLWGQEGSRLAVPL*HLMSSR
Trigger: CCTGGAGCTCATGAGGTGGCACAGGGGGACAGCCAG...CCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR GCA 90 bp GAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGAGCTGGCTGTCCCCCTGTaGCACCTCATGAGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: EGESTGRHFLWGQEGSRELAVPL*HLMSSR
Trigger: CCTGGAGCTCATGAGGTGGCACAGGGGGACAGCCAG...CTCCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR GCA 90 bp GGAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGTGTACCAGCATGGGCTaGAGCCTCTGCCCAGGCCTC +
Preference number: 4 (lower is better)
Translates to: GEGESTGRHFLWGQEGSRCTSMG*SLCPGL
Trigger: GAGGCCTGGGCAGAGGCTGCAGCCCATGCTGGTACA...CCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR GCA 90 bp GGAGGGGAGTGTGAGTGGGGTGGGAGGAGAGGGAGAGAGCACAGGCAGGCACTTCAAAGCAGGCTCCAGTaGCTTCCGCAGAGCCTGTAC +
Preference number: 4 (lower is better)
Translates to: GGECEWGGRRGREHRQALQSRLQ*LPQSLY
Trigger: GTACAGGCTCTGCGGAAGGCACTGGAGCCTGCTTTG...AAGTGCCTGCCTGTGCTCTCTCCCTCTCCTCCCACCCCACTCACACTCCCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR GCA 90 bp GGAGGAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTCCGGACCACAGAGGCTaGTGTCAGCCGATGGAGTGC +
Preference number: 4 (lower is better)
Translates to: GGEGESTGRHFLWGQEGSPDHRG*CQPMEC
Trigger: GCACTCCATCGGCTGACAGCAGCCTCTGTGGTCCGG...AGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR GCA 90 bp GGAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGCCGGACCACAGAGGCTaGTGTCAGCCGATGGAGTGC +
Preference number: 4 (lower is better)
Translates to: GEGESTGRHFLWGQEGSRPDHRG*CQPMEC
Trigger: GCACTCCATCGGCTGACAGCAGCCTCTGTGGTCCGG...CCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR GCA 90 bp GAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGAGCCTCGGAGGGCCAGCTaGTCATTGTCCCGGACCACA +
Preference number: 4 (lower is better)
Translates to: EGESTGRHFLWGQEGSREPRRAS*SLSRTT
Trigger: TGTGGTCCGGGACAATGAGCAGCTGGCCCTCCGAGG...CTCCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR GCA 90 bp GAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGAGCGAGTCCCAGGCGCCTaGTGGAGAGCCTCTCTGAAG +
Preference number: 4 (lower is better)
Translates to: EGESTGRHFLWGQEGSRERVPGA*WRASLK
Trigger: CTTCAGAGAGGCTCTCCAGCAGGCGCCTGGGACTCG...CTCCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR GCA 90 bp GGAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGCGAGTCCCAGGCGCCTaGTGGAGAGCCTCTCTGAAG +
Preference number: 4 (lower is better)
Translates to: GEGESTGRHFLWGQEGSRRVPGA*WRASLK
Trigger: CTTCAGAGAGGCTCTCCAGCAGGCGCCTGGGACTCG...CCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR GCA 90 bp CATAGGATTTGGGGACTGTGGCTCTCTACCCTTCCACTGTGTTGCAGGGAGCTCGAAGAGCCCTCGGGCTaGGGCCTTGAGGGCGGCCAG +
Preference number: 4 (lower is better)
Translates to: HRIWGLWLSTLPLCCRELEEPSG*GLEGGQ
Trigger: CTGGCCGCCCTCAAGGCCGCAGCCCGAGGGCTCTTC...GAGCTCCCTGCAACACAGTGGAAGGGTAGAGAGCCACAGTCCCCAAATCCTATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426955.6
CDS-3UTR GCA 90 bp GGAGGGGAGTGTGAGTGGGGTGGGAGGAGAGGGAGAGAGCACAGGCAGGCACTTAGAGCATCAGTACTCTaGTCCGAGTCCCTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: GGECEWGGRRGREHRQALRASVL*SESLAA
Trigger: GGCTGCCAGGGACTCGGAGCAGAGTACTGATGCTCT...AAGTGCCTGCCTGTGCTCTCTCCCTCTCCTCCCACCCCACTCACACTCCCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426955.6
CDS-3UTR CCA 90 bp ACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGAGGGAGTAAGAAGCCCACCCCGAAGCAGCTaGTGGGGCCGCACTAGACCC +
Preference number: 4 (lower is better)
Translates to: TGRHFLWGQEGSREGVRSPPRSS*WGRTRP
Trigger: GGGTCTAGTGCGGCCCCACCAGCTGCTTCGGGGTGG...GCTTCTTACTCCCTCCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000273794.5
CDS-3UTR CCA 90 bp GGAGGAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTGCCCGGTCACAGTGGTaGCCCTCTGCCAGTGTGACA +
Preference number: 4 (lower is better)
Translates to: GGEGESTGRHFLWGQEGSARSQW*PSASVT
Trigger: TGTCACACTGGCAGAGGGCCACCACTGTGACCGGGC...AGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CCA 90 bp GGAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGCCCGGTCACAGTGGTaGCCCTCTGCCAGTGTGACA +
Preference number: 4 (lower is better)
Translates to: GEGESTGRHFLWGQEGSRARSQW*PSASVT
Trigger: TGTCACACTGGCAGAGGGCCACCACTGTGACCGGGC...CCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CCA 90 bp TTTCCCAGCACCAAGAGGCCAGCCCTGGGCGGCAGTGACTTGAGTGTGTTGGGTCCAGGTGTCCGGGCTTaGAGCTCAGGTCTGGGCAGA +
Preference number: 4 (lower is better)
Translates to: FPSTKRPALGGSDLSVLGPGVRA*SSGLGR
Trigger: TCTGCCCAGACCTGAGCTCCAAGCCCGGACACCTGG...ACCCAACACACTCAAGTCACTGCCGCCCAGGGCTGGCCTCTTGGTGCTGGGAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CCA 90 bp GGAGGAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTCCAGGTGTCCGGGCTTaGAGCTCAGGTCTGGGCAGA +
Preference number: 4 (lower is better)
Translates to: GGEGESTGRHFLWGQEGSPGVRA*SSGLGR
Trigger: TCTGCCCAGACCTGAGCTCCAAGCCCGGACACCTGG...AGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CCA 90 bp TTTCCCAGCACCAAGAGGCCAGCCCTGGGCGGCAGTGACTTGAGTGTGTTGGGTAGCTCCAGGGTTCGGTaGGTAGTGGCGGCCATGGGT +
Preference number: 4 (lower is better)
Translates to: FPSTKRPALGGSDLSVLGSSRVR*VVAAMG
Trigger: ACCCATGGCCGCCACTACCCACCGAACCCTGGAGCT...ACCCAACACACTCAAGTCACTGCCGCCCAGGGCTGGCCTCTTGGTGCTGGGAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CCA 90 bp GGAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGAGCTCCAGGGTTCGGTaGGTAGTGGCGGCCATGGGT +
Preference number: 4 (lower is better)
Translates to: GEGESTGRHFLWGQEGSRSSRVR*VVAAMG
Trigger: ACCCATGGCCGCCACTACCCACCGAACCCTGGAGCT...CCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CCA 90 bp GGAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGAGCCTGTACCAGCATaGGCTGCAGCCTCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: GEGESTGRHFLWGQEGSREPVPA*AAASAQ
Trigger: CTGGGCAGAGGCTGCAGCCCATGCTGGTACAGGCTC...CCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CCA 90 bp GGAGGAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTGAGCCTGTACCAGCATaGGCTGCAGCCTCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: GGEGESTGRHFLWGQEGSEPVPA*AAASAQ
Trigger: CTGGGCAGAGGCTGCAGCCCATGCTGGTACAGGCTC...AGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CCA 90 bp GGAGGGGAGTGTGAGTGGGGTGGGAGGAGAGGGAGAGAGCACAGGCAGGCACTTTGGCAGCCCATGGGCTaGACAGTTCTGCTGAGACAG +
Preference number: 4 (lower is better)
Translates to: GGECEWGGRRGREHRQALWQPMG*TVLLRQ
Trigger: CTGTCTCAGCAGAACTGTCCAGCCCATGGGCTGCCA...AAGTGCCTGCCTGTGCTCTCTCCCTCTCCTCCCACCCCACTCACACTCCCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CCA 90 bp GGAGGGGAGTGTGAGTGGGGTGGGAGGAGAGGGAGAGAGCACAGGCAGGCACTTTCCCAACTGTTGGCCTaGCTCAGGACTTGGGCCATC +
Preference number: 4 (lower is better)
Translates to: GGECEWGGRRGREHRQALSQLLA*LRTWAI
Trigger: GATGGCCCAAGTCCTGAGCCAGGCCAACAGTTGGGA...AAGTGCCTGCCTGTGCTCTCTCCCTCTCCTCCCACCCCACTCACACTCCCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CCA 90 bp GAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGGTCCCAGGCGCCTGCTaGAGAGCCTCTCTGAAGTCC +
Preference number: 4 (lower is better)
Translates to: ERERAQAGTFCGGKRALGVPGAC*RASLKS
Trigger: GGACTTCAGAGAGGCTCTCCAGCAGGCGCCTGGGAC...CCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CCA 90 bp GGAGGAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTGTCCCAGGCGCCTGCTaGAGAGCCTCTCTGAAGTCC +
Preference number: 4 (lower is better)
Translates to: GGEGESTGRHFLWGQEGSVPGAC*RASLKS
Trigger: GGACTTCAGAGAGGCTCTCCAGCAGGCGCCTGGGAC...AGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CCA 90 bp GGAGGAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTGACCTTCCGTGGGAGTaGCAGGGTCCCCCAAAGCAC +
Preference number: 4 (lower is better)
Translates to: GGEGESTGRHFLWGQEGSDLPWE*QGPPKH
Trigger: GTGCTTTGGGGGACCCTGCCACTCCCACGGAAGGTC...AGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CCA 90 bp ACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGAGGGAGTAAGAAGCCAGGCGGAAGGAGCCTaGTGCCTCCTGCAGCCGCAC +
Preference number: 4 (lower is better)
Translates to: TGRHFLWGQEGSREGVRSQAEGA*CLLQPH
Trigger: GTGCGGCTGCAGGAGGCACCAGGCTCCTTCCGCCTG...GCTTCTTACTCCCTCCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CCA 90 bp GGAGGAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTGTGGCACTGTCACCCTaGCCAACACCAGGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: GGEGESTGRHFLWGQEGSVALSP*PTPGPR
Trigger: TCTGGGCCCTGGTGTTGGCCAGGGTGACAGTGCCAC...AGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CCA 90 bp TTTCCCAGCACCAAGAGGCCAGCCCTGGGCGGCAGTGACTTGAGTGTGTTGGGTGTGGCACTGTCACCCTaGCCAACACCAGGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: FPSTKRPALGGSDLSVLGVALSP*PTPGPR
Trigger: TCTGGGCCCTGGTGTTGGCCAGGGTGACAGTGCCAC...ACCCAACACACTCAAGTCACTGCCGCCCAGGGCTGGCCTCTTGGTGCTGGGAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CCA 90 bp GGAGGGGAGTGTGAGTGGGGTGGGAGGAGAGGGAGAGAGCACAGGCAGGCACTTGCCAGCAATCAGCCTTaGCCGCTGTCAGTTCCCACT +
Preference number: 4 (lower is better)
Translates to: GGECEWGGRRGREHRQALASNQP*PLSVPT
Trigger: AGTGGGAACTGACAGCGGCCAAGGCTGATTGCTGGC...AAGTGCCTGCCTGTGCTCTCTCCCTCTCCTCCCACCCCACTCACACTCCCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CCA 90 bp GGAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGCCGTCAGGCAAGTGCTaGGCCCGCAGCCAGCAATCA +
Preference number: 4 (lower is better)
Translates to: GEGESTGRHFLWGQEGSRPSGKC*ARSQQS
Trigger: TGATTGCTGGCTGCGGGCCCAGCACTTGCCTGACGG...CCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CCA 90 bp GAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGCCGTCAGGCAAGTGCTaGGCCCGCAGCCAGCAATCA +
Preference number: 4 (lower is better)
Translates to: ERERAQAGTFCGGKRALGPSGKC*ARSQQS
Trigger: TGATTGCTGGCTGCGGGCCCAGCACTTGCCTGACGG...CCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CCA 90 bp GGAGGGGAGTGTGAGTGGGGTGGGAGGAGAGGGAGAGAGCACAGGCAGGCACTTGGCAGGCACTTTTTGTaGGGGCAAGAGGGCTCTAGG +
Preference number: 4 (lower is better)
Translates to: GGECEWGGRRGREHRQALGRHFL*GQEGSR
Trigger: CCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCC...AAGTGCCTGCCTGTGCTCTCTCCCTCTCCTCCCACCCCACTCACACTCCCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CCA 90 bp GAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGCCACCCCGAAGCAGCTaGTGGGGCTGTCGTCACAGA +
Preference number: 4 (lower is better)
Translates to: ERERAQAGTFCGGKRALGPPRSS*WGCRHR
Trigger: TCTGTGACGACAGCCCCACCAGCTGCTTCGGGGTGG...CCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000426955.6
CDS-3UTR TCA 90 bp GAGGAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAAGCATCAGGTGTGGCTaGTGGGGCTCACTGGGGTGC +
Preference number: 4 (lower is better)
Translates to: EERERAQAGTFCGGKRALSIRCG*WGSLGC
Trigger: GCACCCCAGTGAGCCCCATCAGCCACACCTGATGCT...TAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR TCA 90 bp GGAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGCTTCGCTGTAGCCTCTaGAAATCTCGGCGGGCCCTC +
Preference number: 4 (lower is better)
Translates to: GEGESTGRHFLWGQEGSRLRCSL*KSRRAL
Trigger: GAGGGCCCGCCGAGATTTTCAGAGGCTACAGCGAAG...CCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR TCA 90 bp GAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGAGCTTCGCTGTAGCCTCTaGAAATCTCGGCGGGCCCTC +
Preference number: 4 (lower is better)
Translates to: EGESTGRHFLWGQEGSRELRCSL*KSRRAL
Trigger: GAGGGCCCGCCGAGATTTTCAGAGGCTACAGCGAAG...CTCCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR TCA 90 bp GGAGGGGAGTGTGAGTGGGGTGGGAGGAGAGGGAGAGAGCACAGGCAGGCACTTGGAAGCCATCCACCCTaGAGAGTGAGCAGTAACCGA +
Preference number: 4 (lower is better)
Translates to: GGECEWGGRRGREHRQALGSHPP*RVSSNR
Trigger: TCGGTTACTGCTCACTCTTCAGGGTGGATGGCTTCC...AAGTGCCTGCCTGTGCTCTCTCCCTCTCCTCCCACCCCACTCACACTCCCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR TCA 90 bp GGAGGAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTTCAAGGCCCCCACCTTaGATGGAGCTGGTGTGGGTG +
Preference number: 4 (lower is better)
Translates to: GGEGESTGRHFLWGQEGSSRPPP*MELVWV
Trigger: CACCCACACCAGCTCCATTCAAGGTGGGGGCCTTGA...AGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR GCA 90 bp AGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGAGGGAGTAAGAAGCAGTGGGGGGGCTCTCCAGGCCTaGAAGCAGGCATGGCCCAGT +
Preference number: 4 (lower is better)
Translates to: RHFLWGQEGSREGVRSSGGALQA*KQAWPS
Trigger: ACTGGGCCATGCCTGCTTGCAGGCCTGGAGAGCCCC...CCCACTGCTTCTTACTCCCTCCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCT
61% GC, longest homopolymer 7 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR GCA 90 bp GAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGGACACAGATGGTGGCTaGAGAGCTGGCATGAGGGGG +
Preference number: 4 (lower is better)
Translates to: ERERAQAGTFCGGKRALGDTDGG*RAGMRG
Trigger: CCCCCTCATGCCAGCTCTGCAGCCACCATCTGTGTC...CCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR GCA 90 bp GAGGAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTATGGGGCTCACTGGGGTaGAGCAGGATCTCCAAGGCC +
Preference number: 4 (lower is better)
Translates to: EERERAQAGTFCGGKRALWGSLG*SRISKA
Trigger: GGCCTTGGAGATCCTGCTGCACCCCAGTGAGCCCCA...TAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR GCA 90 bp GGAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGTGCAGGAACCACACCTaGCGGTCCCCATCACTGTCC +
Preference number: 4 (lower is better)
Translates to: GEGESTGRHFLWGQEGSRCRNHT*RSPSLS
Trigger: GGACAGTGATGGGGACCGGCAGGTGTGGTTCCTGCA...CCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR GCA 90 bp GAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGAGGGCCCACTCGGAACCTaGAGGGTCTCAATGCTCTCG +
Preference number: 4 (lower is better)
Translates to: EGESTGRHFLWGQEGSREGPLGT*RVSMLS
Trigger: CGAGAGCATTGAGACCCTGCAGGTTCCGAGTGGGCC...CTCCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR GCA 90 bp TTTCCCAGCACCAAGAGGCCAGCCCTGGGCGGCAGTGACTTGAGTGTGTTGGGTGGCCCACTCGGAACCTaGAGGGTCTCAATGCTCTCG +
Preference number: 4 (lower is better)
Translates to: FPSTKRPALGGSDLSVLGGPLGT*RVSMLS
Trigger: CGAGAGCATTGAGACCCTGCAGGTTCCGAGTGGGCC...ACCCAACACACTCAAGTCACTGCCGCCCAGGGCTGGCCTCTTGGTGCTGGGAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR GCA 90 bp CATAGGATTTGGGGACTGTGGCTCTCTACCCTTCCACTGTGTTGCAGGGAGCTCGACCCACCCGAGCTCTaGCAGCCAGGCTCTTGGCCC +
Preference number: 4 (lower is better)
Translates to: HRIWGLWLSTLPLCCRELDPPEL*QPGSWP
Trigger: GGGCCAAGAGCCTGGCTGGCAGAGCTCGGGTGGGTC...GAGCTCCCTGCAACACAGTGGAAGGGTAGAGAGCCACAGTCCCCAAATCCTATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426955.6
CDS-3UTR GCA 90 bp GGAGGGGAGTGTGAGTGGGGTGGGAGGAGAGGGAGAGAGCACAGGCAGGCACTTGTTCTGCTGAGACAGTaGCTGTTCCCAGTGGCTCTG +
Preference number: 4 (lower is better)
Translates to: GGECEWGGRRGREHRQALVLLRQ*LFPVAL
Trigger: CAGAGCCACTGGGAACAGGCACTGTCTCAGCAGAAC...AAGTGCCTGCCTGTGCTCTCTCCCTCTCCTCCCACCCCACTCACACTCCCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR GCA 90 bp ACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGAGGGAGTAAGAAGCGCGGAAGGAGCCTGGTaGCTCCTGCAGCCGCACCAA +
Preference number: 4 (lower is better)
Translates to: TGRHFLWGQEGSREGVRSAEGAW*LLQPHQ
Trigger: TTGGTGCGGCTGCAGGAGGCACCAGGCTCCTTCCGC...GCTTCTTACTCCCTCCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR GCA 90 bp CATAGGATTTGGGGACTGTGGCTCTCTACCCTTCCACTGTGTTGCAGGGAGCTCGCAGCGGCGCATCGGTaGTCCAGCCAGGCGAGTGCT +
Preference number: 4 (lower is better)
Translates to: HRIWGLWLSTLPLCCRELAAAHR*SSQASA
Trigger: AGCACTCGCCTGGCTGGAGCACCGATGCGCCGCTGC...GAGCTCCCTGCAACACAGTGGAAGGGTAGAGAGCCACAGTCCCCAAATCCTATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426955.6
CDS-3UTR GCA 90 bp ACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGAGGGAGTAAGAAGCAGGCCGTCAGGCAAGTaGTGGGCCCGCAGCCAGCAA +
Preference number: 4 (lower is better)
Translates to: TGRHFLWGQEGSREGVRSRPSGK*WARSQQ
Trigger: TTGCTGGCTGCGGGCCCAGCACTTGCCTGACGGCCT...GCTTCTTACTCCCTCCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CCA 90 bp GGAGGAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTGAAGGAGAAGGTATATaGGGCAGGGCAGCGGGCAGG +
Preference number: 4 (lower is better)
Translates to: GGEGESTGRHFLWGQEGSEGEGI*GRAAGR
Trigger: CCTGCCCGCTGCCCTGCCCCATATACCTTCTCCTTC...AGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CCA 90 bp GAGGAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAAAGGCCCGGTCACAGTaGTGGCCCTCTGCCAGTGTG +
Preference number: 4 (lower is better)
Translates to: EERERAQAGTFCGGKRALKARSQ*WPSASV
Trigger: CACACTGGCAGAGGGCCACCACTGTGACCGGGCCTT...TAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CCA 90 bp GAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGGCTGATGGGGCTCACTaGGGTGCAGCAGGATCTCCA +
Preference number: 4 (lower is better)
Translates to: ERERAQAGTFCGGKRALGADGAH*GAAGSP
Trigger: TGGAGATCCTGCTGCACCCCAGTGAGCCCCATCAGC...CCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CCA 90 bp GAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGAGGCAAGGCCGGCTCTCTaGGAAGAGTGGCTGCACCAA +
Preference number: 4 (lower is better)
Translates to: EGESTGRHFLWGQEGSREARPAL*EEWLHQ
Trigger: TTGGTGCAGCCACTCTTCCCAGAGAGCCGGCCTTGC...CTCCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CCA 90 bp CATAGGATTTGGGGACTGTGGCTCTCTACCCTTCCACTGTGTTGCAGGGAGCTCCTCTTGGCCCCCTGGTaGGCGGGACCGGAAGCCATC +
Preference number: 4 (lower is better)
Translates to: HRIWGLWLSTLPLCCRELLLAPW*AGPEAI
Trigger: GATGGCTTCCGGTCCCGCCCACCAGGGGGCCAAGAG...GAGCTCCCTGCAACACAGTGGAAGGGTAGAGAGCCACAGTCCCCAAATCCTATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426955.6
CDS-3UTR CCA 90 bp GGAGGAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGACGGGGCCTCTTCTaGGGATGGAAACACGGACCC +
Preference number: 4 (lower is better)
Translates to: GGEGESTGRHFLWGQEGSRRGLF*GWKHGP
Trigger: GGGTCCGTGTTTCCATCCCCAGAAGAGGCCCCGTCT...AGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CCA 90 bp GAGGAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTATCTGCTCCGAGTCCCTaGCAGCCCATGGGCTGGACA +
Preference number: 4 (lower is better)
Translates to: EERERAQAGTFCGGKRALSAPSP*QPMGWT
Trigger: TGTCCAGCCCATGGGCTGCCAGGGACTCGGAGCAGA...TAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CCA 90 bp GAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGGGGCTGGCAGAGCAGTaGGTGAGCACATACTGCTCC +
Preference number: 4 (lower is better)
Translates to: ERERAQAGTFCGGKRALGGLAEQ*VSTYCS
Trigger: GGAGCAGTATGTGCTCACCCACTGCTCTGCCAGCCC...CCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CCA 90 bp CATAGGATTTGGGGACTGTGGCTCTCTACCCTTCCACTGTGTTGCAGGGAGCTCGGCGAGGACCTTCCGTaGGAGTGGCAGGGTCCCCCA +
Preference number: 4 (lower is better)
Translates to: HRIWGLWLSTLPLCCRELGEDLP*EWQGPP
Trigger: TGGGGGACCCTGCCACTCCCACGGAAGGTCCTCGCC...GAGCTCCCTGCAACACAGTGGAAGGGTAGAGAGCCACAGTCCCCAAATCCTATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426955.6
CDS-3UTR CCA 90 bp GGAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGTCACTGTTGTTGGCCTaGCCCGGGTCAGGGCTACAG +
Preference number: 4 (lower is better)
Translates to: GEGESTGRHFLWGQEGSRSLLLA*PGSGLQ
Trigger: CTGTAGCCCTGACCCGGGCCAGGCCAACAACAGTGA...CCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CCA 90 bp GAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGAGTCACTGTTGTTGGCCTaGCCCGGGTCAGGGCTACAG +
Preference number: 4 (lower is better)
Translates to: EGESTGRHFLWGQEGSRESLLLA*PGSGLQ
Trigger: CTGTAGCCCTGACCCGGGCCAGGCCAACAACAGTGA...CTCCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CCA 90 bp GAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGCAGTGGGGGACAGGCTaGCACCAGCCTACACTTTCC +
Preference number: 4 (lower is better)
Translates to: ERERAQAGTFCGGKRALGQWGTG*HQPTLS
Trigger: GGAAAGTGTAGGCTGGTGCCAGCCTGTCCCCCACTG...CCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CCA 90 bp GAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGAGGGGAGTAAGAAGCAGTaGGGGACAGGCTGGCACCAG +
Preference number: 4 (lower is better)
Translates to: EGESTGRHFLWGQEGSREGSKKQ*GTGWHQ
Trigger: CTGGTGCCAGCCTGTCCCCCACTGCTTCTTACTCCC...CTCCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR TCA 90 bp ACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGAGGGAGTAAGAAGCAGTGGCGGCCATGGGTaGGGCAGCAGTGAGCAGGAA +
Preference number: 4 (lower is better)
Translates to: TGRHFLWGQEGSREGVRSSGGHG*GSSEQE
Trigger: TTCCTGCTCACTGCTGCCTCACCCATGGCCGCCACT...GCTTCTTACTCCCTCCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR TCA 90 bp AGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGAGGGAGTAAGAAGCAGTGGGAGTGGCGGCCATGGGTaGGGCAGCAGTGAGCAGGAA +
Preference number: 4 (lower is better)
Translates to: RHFLWGQEGSREGVRSSGSGGHG*GSSEQE
Trigger: TTCCTGCTCACTGCTGCCTCACCCATGGCCGCCACT...CCCACTGCTTCTTACTCCCTCCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR TCA 90 bp GAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGTGGCAGAGCAGTGGGTaGGCACATACTGCTCCCGAA +
Preference number: 4 (lower is better)
Translates to: ERERAQAGTFCGGKRALGWQSSG*AHTAPE
Trigger: TTCGGGAGCAGTATGTGCTCACCCACTGCTCTGCCA...CCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR TCA 90 bp AGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGAGGGAGTAAGAAGCAGTGGGAGAGCCGCTCTGTGCTaGCGGCCCAGCACCTCAGTA +
Preference number: 4 (lower is better)
Translates to: RHFLWGQEGSREGVRSSGRAALC*RPSTSV
Trigger: TACTGAGGTGCTGGGCCGTCAGCACAGAGCGGCTCT...CCCACTGCTTCTTACTCCCTCCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR TCA 90 bp GAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGAGGGAGAGCAGGTTTCCTaGGTCATCCAGGCCTTGTCC +
Preference number: 4 (lower is better)
Translates to: EGESTGRHFLWGQEGSREGEQVS*VIQALS
Trigger: GGACAAGGCCTGGATGACTCAGGAAACCTGCTCTCC...CTCCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR TCA 90 bp AGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGAGGGAGTAAGAAGCAGTGGGGGGCTACAGAGTTTGTaGCGGCGGCCCATGCTGAGC +
Preference number: 4 (lower is better)
Translates to: RHFLWGQEGSREGVRSSGGLQSL*RRPMLS
Trigger: GCTCAGCATGGGCCGCCGTCACAAACTCTGTAGCCC...CCCACTGCTTCTTACTCCCTCCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR GCA 90 bp ACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGAGGGAGTAAGAAGCCTTCCTCCTGAAGGCTaGCCACCCCGAAGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: TGRHFLWGQEGSREGVRSLPPEG*PPRSSW
Trigger: CCAGCTGCTTCGGGGTGGGCAGCCTTCAGGAGGAAG...GCTTCTTACTCCCTCCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR GCA 90 bp CATAGGATTTGGGGACTGTGGCTCTCTACCCTTCCACTGTGTTGCAGGGAGCTCGGGGCTCTCCAGGCCTaGAAGCAGGCATGGCCCAGT +
Preference number: 4 (lower is better)
Translates to: HRIWGLWLSTLPLCCRELGALQA*KQAWPS
Trigger: ACTGGGCCATGCCTGCTTGCAGGCCTGGAGAGCCCC...GAGCTCCCTGCAACACAGTGGAAGGGTAGAGAGCCACAGTCCCCAAATCCTATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426955.6
CDS-3UTR GCA 90 bp ACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGAGGGAGTAAGAAGCCTGCTGAGCTCAGGCTaGCGCCCTCCAGCATCAGGT +
Preference number: 4 (lower is better)
Translates to: TGRHFLWGQEGSREGVRSLLSSG*RPPASG
Trigger: ACCTGATGCTGGAGGGCGGCAGCCTGAGCTCAGCAG...GCTTCTTACTCCCTCCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR GCA 90 bp GAGGAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTATGCAGGAACCACACCTaGCGGTCCCCATCACTGTCC +
Preference number: 4 (lower is better)
Translates to: EERERAQAGTFCGGKRALCRNHT*RSPSLS
Trigger: GGACAGTGATGGGGACCGGCAGGTGTGGTTCCTGCA...TAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR GCA 90 bp GAGGAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTATTGTGGAAGCGTCGCTaGAGGAACCACACCTGCCGG +
Preference number: 4 (lower is better)
Translates to: EERERAQAGTFCGGKRALLWKRR*RNHTCR
Trigger: CCGGCAGGTGTGGTTCCTGCAGCGACGCTTCCACAA...TAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR GCA 90 bp GGAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGCACAGCATCATCACTaGAAGGCCGGCTCTCTGGGA +
Preference number: 4 (lower is better)
Translates to: GEGESTGRHFLWGQEGSRAQHHH*KAGSLG
Trigger: TCCCAGAGAGCCGGCCTTGCAGTGATGATGCTGTGC...CCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR GCA 90 bp TTTCCCAGCACCAAGAGGCCAGCCCTGGGCGGCAGTGACTTGAGTGTGTTGGGTGCACAGCATCATCACTaGAAGGCCGGCTCTCTGGGA +
Preference number: 4 (lower is better)
Translates to: FPSTKRPALGGSDLSVLGAQHHH*KAGSLG
Trigger: TCCCAGAGAGCCGGCCTTGCAGTGATGATGCTGTGC...ACCCAACACACTCAAGTCACTGCCGCCCAGGGCTGGCCTCTTGGTGCTGGGAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR GCA 90 bp AGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGAGGGAGTAAGAAGCAGTGGGTGTACCAGCATGGGCTaGAGCCTCTGCCCAGGCCTC +
Preference number: 4 (lower is better)
Translates to: RHFLWGQEGSREGVRSSGCTSMG*SLCPGL
Trigger: GAGGCCTGGGCAGAGGCTGCAGCCCATGCTGGTACA...CCCACTGCTTCTTACTCCCTCCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR GCA 90 bp GAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGAGCAAAGCAGGCTCCAGTaGCTTCCGCAGAGCCTGTAC +
Preference number: 4 (lower is better)
Translates to: EGESTGRHFLWGQEGSREQSRLQ*LPQSLY
Trigger: GTACAGGCTCTGCGGAAGGCACTGGAGCCTGCTTTG...CTCCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR GCA 90 bp ACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGAGGGAGTAAGAAGCAGCTCCCGGCTGCTGTaGAGGGTCACCGTCATGGTG +
Preference number: 4 (lower is better)
Translates to: TGRHFLWGQEGSREGVRSSSRLL*RVTVMV
Trigger: CACCATGACGGTGACCCTGCACAGCAGCCGGGAGCT...GCTTCTTACTCCCTCCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000426955.6
CDS-3UTR CCA 90 bp GAGGAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGCCTGCAAGCAGGCATaGCCCAGTCACCAGCATCTC +
Preference number: 4 (lower is better)
Translates to: EERERAQAGTFCGGKRALACKQA*PSHQHL
Trigger: GAGATGCTGGTGACTGGGCCATGCCTGCTTGCAGGC...TAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CCA 90 bp AGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGAGGGAGTAAGAAGCAGTGGGAAGGCCCGGTCACAGTaGTGGCCCTCTGCCAGTGTG +
Preference number: 4 (lower is better)
Translates to: RHFLWGQEGSREGVRSSGKARSQ*WPSASV
Trigger: CACACTGGCAGAGGGCCACCACTGTGACCGGGCCTT...CCCACTGCTTCTTACTCCCTCCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CCA 90 bp GAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGCAAAGGAGAAGCATCTaGCTGTCCCCCTGTGCCACC +
Preference number: 4 (lower is better)
Translates to: ERERAQAGTFCGGKRALGQRRSI*LSPCAT
Trigger: GGTGGCACAGGGGGACAGCCAGATGCTTCTCCTTTG...CCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CCA 90 bp GAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGAGGGCAGATAAACCCTaGAGCAGCTGGTGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: ERERAQAGTFCGGKRALGRADKP*SSWWQV
Trigger: CACCTGCCACCAGCTGCTCCAGGGTTTATCTGCCCT...CCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CCA 90 bp TTTCCCAGCACCAAGAGGCCAGCCCTGGGCGGCAGTGACTTGAGTGTGTTGGGTAGATGCGGCGCCATATaGCTGTGTCAGAGGGGTTGG +
Preference number: 4 (lower is better)
Translates to: FPSTKRPALGGSDLSVLGRCGAI*LCQRGW
Trigger: CCAACCCCTCTGACACAGCCATATGGCGCCGCATCT...ACCCAACACACTCAAGTCACTGCCGCCCAGGGCTGGCCTCTTGGTGCTGGGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CCA 90 bp AGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGAGGGAGTAAGAAGCAGTGGGGGCCCCCACCTTGAATaGAGCTGGTGTGGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: RHFLWGQEGSREGVRSSGGPHLE*SWCGCR
Trigger: CCTGCACCCACACCAGCTCCATTCAAGGTGGGGGCC...CCCACTGCTTCTTACTCCCTCCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CCA 90 bp ACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGAGGGAGTAAGAAGCGGCCCCCACCTTGAATaGAGCTGGTGTGGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: TGRHFLWGQEGSREGVRSGPHLE*SWCGCR
Trigger: CCTGCACCCACACCAGCTCCATTCAAGGTGGGGGCC...GCTTCTTACTCCCTCCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CCA 90 bp GAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGGGCAGGCACTTTTTGTaGGGGCAAGAGGGCTCTAGG +
Preference number: 4 (lower is better)
Translates to: ERERAQAGTFCGGKRALGGRHFL*GQEGSR
Trigger: CCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCC...CCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 24 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR TCA 90 bp AGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGAGGGAGTAAGAAGCAGTGGGAGGCCTGGCCTCTGCTaGGGGCAGATAAACCCTGGA +
Preference number: 4 (lower is better)
Translates to: RHFLWGQEGSREGVRSSGRPGLC*GQINPG
Trigger: TCCAGGGTTTATCTGCCCTCAGCAGAGGCCAGGCCT...CCCACTGCTTCTTACTCCCTCCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR TCA 90 bp TTTCCCAGCACCAAGAGGCCAGCCCTGGGCGGCAGTGACTTGAGTGTGTTGGGTATCCACCCTGAAGAGTaGGCAGTAACCGAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: FPSTKRPALGGSDLSVLGIHPEE*AVTEQL
Trigger: CAGCTGCTCGGTTACTGCTCACTCTTCAGGGTGGAT...ACCCAACACACTCAAGTCACTGCCGCCCAGGGCTGGCCTCTTGGTGCTGGGAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR TCA 90 bp GGAGGAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTATCCACCCTGAAGAGTaGGCAGTAACCGAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: GGEGESTGRHFLWGQEGSIHPEE*AVTEQL
Trigger: CAGCTGCTCGGTTACTGCTCACTCTTCAGGGTGGAT...AGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR TCA 90 bp ACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGAGGGAGTAAGAAGCTGTTCCCAGTGGCTCTaGGGTGCCAGTGGGCTCAGT +
Preference number: 4 (lower is better)
Translates to: TGRHFLWGQEGSREGVRSCSQWL*GASGLS
Trigger: ACTGAGCCCACTGGCACCTCAGAGCCACTGGGAACA...GCTTCTTACTCCCTCCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR TCA 90 bp AGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGAGGGAGTAAGAAGCAGTGGGTCAAGGCCCCCACCTTaGATGGAGCTGGTGTGGGTG +
Preference number: 4 (lower is better)
Translates to: RHFLWGQEGSREGVRSSGSRPPP*MELVWV
Trigger: CACCCACACCAGCTCCATTCAAGGTGGGGGCCTTGA...CCCACTGCTTCTTACTCCCTCCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR GCA 90 bp GGAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGACAGTGGTGGCCCTCTaGCAGTGTGACACAGATGGT +
Preference number: 4 (lower is better)
Translates to: GEGESTGRHFLWGQEGSRTVVAL*QCDTDG
Trigger: ACCATCTGTGTCACACTGGCAGAGGGCCACCACTGT...CCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR GCA 90 bp GGAGGGGAGTGTGAGTGGGGTGGGAGGAGAGGGAGAGAGCACAGGCAGGCACTTAATGGCATCCTTGTGTaGCACGCTGCTGCTATCCAA +
Preference number: 4 (lower is better)
Translates to: GGECEWGGRRGREHRQALNGILV*HAAAIQ
Trigger: TTGGATAGCAGCAGCGTGGCACACAAGGATGCCATT...AAGTGCCTGCCTGTGCTCTCTCCCTCTCCTCCCACCCCACTCACACTCCCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR GCA 90 bp GGAGGAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTTCTGGGAAGAGTGGCTaGACCAACGTCCCAAACACG +
Preference number: 4 (lower is better)
Translates to: GGEGESTGRHFLWGQEGSSGKSG*TNVPNT
Trigger: CGTGTTTGGGACGTTGGTGCAGCCACTCTTCCCAGA...AGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR GCA 90 bp TTTCCCAGCACCAAGAGGCCAGCCCTGGGCGGCAGTGACTTGAGTGTGTTGGGTCCTGCAGGGTCTCAATaGTCTCGCAGATCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: FPSTKRPALGGSDLSVLGPAGSQ*SRRSAA
Trigger: TGCAGCTGATCTGCGAGAGCATTGAGACCCTGCAGG...ACCCAACACACTCAAGTCACTGCCGCCCAGGGCTGGCCTCTTGGTGCTGGGAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR GCA 90 bp GGAGGAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTCCTGCAGGGTCTCAATaGTCTCGCAGATCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: GGEGESTGRHFLWGQEGSPAGSQ*SRRSAA
Trigger: TGCAGCTGATCTGCGAGAGCATTGAGACCCTGCAGG...AGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR GCA 90 bp GAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGCACAGCAGGTGTAGCTaGAGGTTTTGGTCCCAGTGG +
Preference number: 4 (lower is better)
Translates to: ERERAQAGTFCGGKRALGHSRCS*RFWSQW
Trigger: CCACTGGGACCAAAACCTGCAGCTACACCTGCTGTG...CCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CCA 90 bp ACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGAGGGAGTAAGAAGCGAAGGAGAAGGTATATaGGGCAGGGCAGCGGGCAGG +
Preference number: 4 (lower is better)
Translates to: TGRHFLWGQEGSREGVRSEGEGI*GRAAGR
Trigger: CCTGCCCGCTGCCCTGCCCCATATACCTTCTCCTTC...GCTTCTTACTCCCTCCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CCA 90 bp ACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGAGGGAGTAAGAAGCGCCTGCAAGCAGGCATaGCCCAGTCACCAGCATCTC +
Preference number: 4 (lower is better)
Translates to: TGRHFLWGQEGSREGVRSACKQA*PSHQHL
Trigger: GAGATGCTGGTGACTGGGCCATGCCTGCTTGCAGGC...GCTTCTTACTCCCTCCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CCA 90 bp GGAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGAGCAGGATGTCCTTGTaGAAGCGTCGCTGCAGGAAC +
Preference number: 4 (lower is better)
Translates to: GEGESTGRHFLWGQEGSRSRMSL*KRRCRN
Trigger: GTTCCTGCAGCGACGCTTCCACAAGGACATCCTGCT...CCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CCA 90 bp TTTCCCAGCACCAAGAGGCCAGCCCTGGGCGGCAGTGACTTGAGTGTGTTGGGTAGCAGGATGTCCTTGTaGAAGCGTCGCTGCAGGAAC +
Preference number: 4 (lower is better)
Translates to: FPSTKRPALGGSDLSVLGSRMSL*KRRCRN
Trigger: GTTCCTGCAGCGACGCTTCCACAAGGACATCCTGCT...ACCCAACACACTCAAGTCACTGCCGCCCAGGGCTGGCCTCTTGGTGCTGGGAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CCA 90 bp GAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGAGAGGTTGATAAGCGTCTaGGGCGGGAGGGACTTCACA +
Preference number: 4 (lower is better)
Translates to: EGESTGRHFLWGQEGSRERLISV*GGRDFT
Trigger: TGTGAAGTCCCTCCCGCCCCAGACGCTTATCAACCT...CTCCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CCA 90 bp GGAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGCTCTCTGGGAAGAGTaGCTGCACCAACGTCCCAAA +
Preference number: 4 (lower is better)
Translates to: GEGESTGRHFLWGQEGSRALWEE*LHQRPK
Trigger: TTTGGGACGTTGGTGCAGCCACTCTTCCCAGAGAGC...CCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CCA 90 bp ACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGAGGGAGTAAGAAGCGCAAGGCCGGCTCTCTaGGAAGAGTGGCTGCACCAA +
Preference number: 4 (lower is better)
Translates to: TGRHFLWGQEGSREGVRSARPAL*EEWLHQ
Trigger: TTGGTGCAGCCACTCTTCCCAGAGAGCCGGCCTTGC...GCTTCTTACTCCCTCCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CCA 90 bp GAGGAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAAGGGCAGATAAACCCTaGAGCAGCTGGTGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: EERERAQAGTFCGGKRALRADKP*SSWWQV
Trigger: CACCTGCCACCAGCTGCTCCAGGGTTTATCTGCCCT...TAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CCA 90 bp ACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGAGGGAGTAAGAAGCGGCCTCTTCTGGGGATaGAAACACGGACCCACCCGA +
Preference number: 4 (lower is better)
Translates to: TGRHFLWGQEGSREGVRSGLFWG*KHGPTR
Trigger: TCGGGTGGGTCCGTGTTTCCATCCCCAGAAGAGGCC...GCTTCTTACTCCCTCCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CCA 90 bp ACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGAGGGAGTAAGAAGCAGACGGGGCCTCTTCTaGGGATGGAAACACGGACCC +
Preference number: 4 (lower is better)
Translates to: TGRHFLWGQEGSREGVRSRRGLF*GWKHGP
Trigger: GGGTCCGTGTTTCCATCCCCAGAAGAGGCCCCGTCT...GCTTCTTACTCCCTCCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CCA 90 bp ACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGAGGGAGTAAGAAGCCACCTTGAATGGAGCTaGTGTGGGTGCAGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: TGRHFLWGQEGSREGVRSHLEWS*CGCRQG
Trigger: CCCCTGCCTGCACCCACACCAGCTCCATTCAAGGTG...GCTTCTTACTCCCTCCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CCA 90 bp GGAGGAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTTTGGAGTTGCCATTTTaGTCCGAGTCCCAGGCGCCT +
Preference number: 4 (lower is better)
Translates to: GGEGESTGRHFLWGQEGSLELPF*SESQAP
Trigger: AGGCGCCTGGGACTCGGACCAAAATGGCAACTCCAA...AGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CCA 90 bp TTTCCCAGCACCAAGAGGCCAGCCCTGGGCGGCAGTGACTTGAGTGTGTTGGGTCCCCCAAAGCACGCTTaGAGTTGCCATTTTGGTCCG +
Preference number: 4 (lower is better)
Translates to: FPSTKRPALGGSDLSVLGPPKHA*SCHFGP
Trigger: CGGACCAAAATGGCAACTCCAAGCGTGCTTTGGGGG...ACCCAACACACTCAAGTCACTGCCGCCCAGGGCTGGCCTCTTGGTGCTGGGAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CCA 90 bp GGAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGAGGTTTTGGTCCCAGTaGCGCAGTAGCAGGAAGAGC +
Preference number: 4 (lower is better)
Translates to: GEGESTGRHFLWGQEGSRRFWSQ*RSSRKS
Trigger: GCTCTTCCTGCTACTGCGCCACTGGGACCAAAACCT...CCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CCA 90 bp GAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGAGAGGTTTTGGTCCCAGTaGCGCAGTAGCAGGAAGAGC +
Preference number: 4 (lower is better)
Translates to: EGESTGRHFLWGQEGSRERFWSQ*RSSRKS
Trigger: GCTCTTCCTGCTACTGCGCCACTGGGACCAAAACCT...CTCCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CCA 90 bp ACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGAGGGAGTAAGAAGCCAGTGGGGGACAGGCTaGCACCAGCCTACACTTTCC +
Preference number: 4 (lower is better)
Translates to: TGRHFLWGQEGSREGVRSQWGTG*HQPTLS
Trigger: GGAAAGTGTAGGCTGGTGCCAGCCTGTCCCCCACTG...GCTTCTTACTCCCTCCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR TCA 90 bp ACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGAGGGAGTAAGAAGCTGGGTCCAGGATCCGTaGCTGGGTCTGTCAGAGCAT +
Preference number: 4 (lower is better)
Translates to: TGRHFLWGQEGSREGVRSWVQDP*LGLSEH
Trigger: ATGCTCTGACAGACCCAGTCACGGATCCTGGACCCA...GCTTCTTACTCCCTCCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR TCA 90 bp GGAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGCGAATGTACGAGGACTaGAAGATGCGGCGCCATATG +
Preference number: 4 (lower is better)
Translates to: GEGESTGRHFLWGQEGSRRMYED*KMRRHM
Trigger: CATATGGCGCCGCATCTTTCAGTCCTCGTACATTCG...CCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR TCA 90 bp TTTCCCAGCACCAAGAGGCCAGCCCTGGGCGGCAGTGACTTGAGTGTGTTGGGTCGAATGTACGAGGACTaGAAGATGCGGCGCCATATG +
Preference number: 4 (lower is better)
Translates to: FPSTKRPALGGSDLSVLGRMYED*KMRRHM
Trigger: CATATGGCGCCGCATCTTTCAGTCCTCGTACATTCG...ACCCAACACACTCAAGTCACTGCCGCCCAGGGCTGGCCTCTTGGTGCTGGGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR TCA 90 bp ACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGAGGGAGTAAGAAGCGGAGAGCAGGTTTCCTaGGTCATCCAGGCCTTGTCC +
Preference number: 4 (lower is better)
Translates to: TGRHFLWGQEGSREGVRSGEQVS*VIQALS
Trigger: GGACAAGGCCTGGATGACTCAGGAAACCTGCTCTCC...GCTTCTTACTCCCTCCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR TCA 90 bp ACTTTATTGCATAGGATTTGGGGACTGTGGCTCTCTACCCTTCCACTGTGTTGCGGGCTCAGCGGGCTCTaGGCTGCACACCTGCAGGGC +
Preference number: 4 (lower is better)
Translates to: TLLHRIWGLWLSTLPLCCGLSGL*AAHLQG
Trigger: GCCCTGCAGGTGTGCAGCTCAGAGCCCGCTGAGCCC...GCAACACAGTGGAAGGGTAGAGAGCCACAGTCCCCAAATCCTATGCAATAAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426955.6
CDS-3UTR GCA 90 bp GAGGAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAACAGTGGTGGCCCTCTaGCAGTGTGACACAGATGGT +
Preference number: 4 (lower is better)
Translates to: EERERAQAGTFCGGKRALTVVAL*QCDTDG
Trigger: ACCATCTGTGTCACACTGGCAGAGGGCCACCACTGT...TAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR GCA 90 bp CATAGGATTTGGGGACTGTGGCTCTCTACCCTTCCACTGTGTTGCAGGGAGCTCTTGTGGAAGCGTCGCTaGAGGAACCACACCTGCCGG +
Preference number: 4 (lower is better)
Translates to: HRIWGLWLSTLPLCCRELLWKRR*RNHTCR
Trigger: CCGGCAGGTGTGGTTCCTGCAGCGACGCTTCCACAA...GAGCTCCCTGCAACACAGTGGAAGGGTAGAGAGCCACAGTCCCCAAATCCTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426955.6
CDS-3UTR GCA 90 bp GAGGAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGTTCTGCTGAGACAGTaGCTGTTCCCAGTGGCTCTG +
Preference number: 4 (lower is better)
Translates to: EERERAQAGTFCGGKRALVLLRQ*LFPVAL
Trigger: CAGAGCCACTGGGAACAGGCACTGTCTCAGCAGAAC...TAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR GCA 90 bp GAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGAAGCACGCTTGGAGTTaGCATTTTGGTCCGAGTCCC +
Preference number: 4 (lower is better)
Translates to: ERERAQAGTFCGGKRALGKHAWS*HFGPSP
Trigger: GGGACTCGGACCAAAATGGCAACTCCAAGCGTGCTT...CCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR GCA 90 bp GGAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGGTAGTCATGGTCGCTaGCTTCACTGTTGTTGGCCT +
Preference number: 4 (lower is better)
Translates to: GEGESTGRHFLWGQEGSRGSHGR*LHCCWP
Trigger: AGGCCAACAACAGTGAAGGCAGCGACCATGACTACC...CCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR GCA 90 bp GAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGGGTAGTCATGGTCGCTaGCTTCACTGTTGTTGGCCT +
Preference number: 4 (lower is better)
Translates to: ERERAQAGTFCGGKRALGGSHGR*LHCCWP
Trigger: AGGCCAACAACAGTGAAGGCAGCGACCATGACTACC...CCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR GCA 90 bp GAGGAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTACACAGCAGGTGTAGCTaGAGGTTTTGGTCCCAGTGG +
Preference number: 4 (lower is better)
Translates to: EERERAQAGTFCGGKRALHSRCS*RFWSQW
Trigger: CCACTGGGACCAAAACCTGCAGCTACACCTGCTGTG...TAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CCA 90 bp ACTTTATTGCATAGGATTTGGGGACTGTGGCTCTCTACCCTTCCACTGTGTTGCTGCCAGCCAGGCTCTTaGCCCCCTGGTGGGCGGGAC +
Preference number: 4 (lower is better)
Translates to: TLLHRIWGLWLSTLPLCCCQPGS*PPGGRD
Trigger: GTCCCGCCCACCAGGGGGCCAAGAGCCTGGCTGGCA...GCAACACAGTGGAAGGGTAGAGAGCCACAGTCCCCAAATCCTATGCAATAAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426955.6
CDS-3UTR CCA 90 bp TTTCCCAGCACCAAGAGGCCAGCCCTGGGCGGCAGTGACTTGAGTGTGTTGGGTTCCAGGATCCGTGACTaGGTCTGTCAGAGCATCAGT +
Preference number: 4 (lower is better)
Translates to: FPSTKRPALGGSDLSVLGSRIRD*VCQSIS
Trigger: ACTGATGCTCTGACAGACCCAGTCACGGATCCTGGA...ACCCAACACACTCAAGTCACTGCCGCCCAGGGCTGGCCTCTTGGTGCTGGGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CCA 90 bp CATAGGATTTGGGGACTGTGGCTCTCTACCCTTCCACTGTGTTGCAGGGAGCTCGGGCTGGCAGAGCAGTaGGTGAGCACATACTGCTCC +
Preference number: 4 (lower is better)
Translates to: HRIWGLWLSTLPLCCRELGLAEQ*VSTYCS
Trigger: GGAGCAGTATGTGCTCACCCACTGCTCTGCCAGCCC...GAGCTCCCTGCAACACAGTGGAAGGGTAGAGAGCCACAGTCCCCAAATCCTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426955.6
CDS-3UTR CCA 90 bp AGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGAGGGAGTAAGAAGCAGTGGGTCCCAACTGTTGGCCTaGCTCAGGACTTGGGCCATC +
Preference number: 4 (lower is better)
Translates to: RHFLWGQEGSREGVRSSGSQLLA*LRTWAI
Trigger: GATGGCCCAAGTCCTGAGCCAGGCCAACAGTTGGGA...CCCACTGCTTCTTACTCCCTCCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CCA 90 bp ACTTTATTGCATAGGATTTGGGGACTGTGGCTCTCTACCCTTCCACTGTGTTGCGGGAGGACGGGGAGGTaGGCGGCGAGGACCTTCCGT +
Preference number: 4 (lower is better)
Translates to: TLLHRIWGLWLSTLPLCCGRTGR*AARTFR
Trigger: ACGGAAGGTCCTCGCCGCCCACCTCCCCGTCCTCCC...GCAACACAGTGGAAGGGTAGAGAGCCACAGTCCCCAAATCCTATGCAATAAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426955.6
CDS-3UTR CCA 90 bp ACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGAGGGAGTAAGAAGCGCCAGCAATCAGCCTTaGCCGCTGTCAGTTCCCACT +
Preference number: 4 (lower is better)
Translates to: TGRHFLWGQEGSREGVRSASNQP*PLSVPT
Trigger: AGTGGGAACTGACAGCGGCCAAGGCTGATTGCTGGC...GCTTCTTACTCCCTCCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CCA 90 bp GAGGAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTATGTAGCTGCAGGTTTTaGTCCCAGTGGCGCAGTAGC +
Preference number: 4 (lower is better)
Translates to: EERERAQAGTFCGGKRALCSCRF*SQWRSS
Trigger: GCTACTGCGCCACTGGGACCAAAACCTGCAGCTACA...TAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CCA 90 bp AGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGAGGGAGTAAGAAGCAGTGGGCCTTCACACGTTCGCTaGGCTGTAGCACAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: RHFLWGQEGSREGVRSSGPSHVR*AVAQQV
Trigger: CACCTGCTGTGCTACAGCCCAGCGAACGTGTGAAGG...CCCACTGCTTCTTACTCCCTCCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CCA 90 bp CATAGGATTTGGGGACTGTGGCTCTCTACCCTTCCACTGTGTTGCAGGGAGCTCGGGAGTAAGAAGCAGTaGGGGACAGGCTGGCACCAG +
Preference number: 4 (lower is better)
Translates to: HRIWGLWLSTLPLCCRELGSKKQ*GTGWHQ
Trigger: CTGGTGCCAGCCTGTCCCCCACTGCTTCTTACTCCC...GAGCTCCCTGCAACACAGTGGAAGGGTAGAGAGCCACAGTCCCCAAATCCTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426955.6
CDS-3UTR CCA 90 bp ACTTTATTGCATAGGATTTGGGGACTGTGGCTCTCTACCCTTCCACTGTGTTGCCGCCGGCTCTGCAGCTaGAAGGAGACGCGCCGTCCG +
Preference number: 4 (lower is better)
Translates to: TLLHRIWGLWLSTLPLCCRRLCS*KETRRP
Trigger: CGGACGGCGCGTCTCCTTCCAGCTGCAGAGCCGGCG...GCAACACAGTGGAAGGGTAGAGAGCCACAGTCCCCAAATCCTATGCAATAAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426955.6
CDS-3UTR CCA 90 bp ACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGAGGGAGTAAGAAGCAACGTGGACCGGGCCTaGGCCAGATCCAAGACAAGA +
Preference number: 4 (lower is better)
Translates to: TGRHFLWGQEGSREGVRSNVDRA*ARSKTR
Trigger: TCTTGTCTTGGATCTGGCCCAGGCCCGGTCCACGTT...GCTTCTTACTCCCTCCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000426955.6
CDS-3UTR TCA 90 bp AGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGAGGGAGTAAGAAGCAGTGGGGGAAGCCATCCACCCTaGAGAGTGAGCAGTAACCGA +
Preference number: 4 (lower is better)
Translates to: RHFLWGQEGSREGVRSSGGSHPP*RVSSNR
Trigger: TCGGTTACTGCTCACTCTTCAGGGTGGATGGCTTCC...CCCACTGCTTCTTACTCCCTCCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR TCA 90 bp ACTTTATTGCATAGGATTTGGGGACTGTGGCTCTCTACCCTTCCACTGTGTTGCCTGCGGCAGCCCTGCTaGGAAGGGGGCTCCAAGGGA +
Preference number: 4 (lower is better)
Translates to: TLLHRIWGLWLSTLPLCCLRQPC*EGGSKG
Trigger: TCCCTTGGAGCCCCCTTCTCAGCAGGGCTGCCGCAG...GCAACACAGTGGAAGGGTAGAGAGCCACAGTCCCCAAATCCTATGCAATAAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426955.6
CDS-3UTR GCA 90 bp TTTCCCAGCACCAAGAGGCCAGCCCTGGGCGGCAGTGACTTGAGTGTGTTGGGTCCTTGTGTGCCACGCTaGTGCTATCCAAAAGGAAGA +
Preference number: 4 (lower is better)
Translates to: FPSTKRPALGGSDLSVLGPCVPR*CYPKGR
Trigger: TCTTCCTTTTGGATAGCAGCAGCGTGGCACACAAGG...ACCCAACACACTCAAGTCACTGCCGCCCAGGGCTGGCCTCTTGGTGCTGGGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR GCA 90 bp ACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGAGGGAGTAAGAAGCTCTGGGAAGAGTGGCTaGACCAACGTCCCAAACACG +
Preference number: 4 (lower is better)
Translates to: TGRHFLWGQEGSREGVRSSGKSG*TNVPNT
Trigger: CGTGTTTGGGACGTTGGTGCAGCCACTCTTCCCAGA...GCTTCTTACTCCCTCCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR GCA 90 bp TTTCCCAGCACCAAGAGGCCAGCCCTGGGCGGCAGTGACTTGAGTGTGTTGGGTCTCTCGCAGATCAGCTaGACAGCATCATCACTGCAA +
Preference number: 4 (lower is better)
Translates to: FPSTKRPALGGSDLSVLGLSQIS*TASSLQ
Trigger: TTGCAGTGATGATGCTGTGCAGCTGATCTGCGAGAG...ACCCAACACACTCAAGTCACTGCCGCCCAGGGCTGGCCTCTTGGTGCTGGGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR GCA 90 bp GAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGCTCTCGCAGATCAGCTaGACAGCATCATCACTGCAA +
Preference number: 4 (lower is better)
Translates to: ERERAQAGTFCGGKRALGLSQIS*TASSLQ
Trigger: TTGCAGTGATGATGCTGTGCAGCTGATCTGCGAGAG...CCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR GCA 90 bp CTAAGAGGCACTTTATTGCATAGGATTTGGGGACTGTGGCTCTCTACCCTTCCACTGAGGCTGGCGCGGTaGACGGCAAAGGGCGAGGCA +
Preference number: 4 (lower is better)
Translates to: LRGTLLHRIWGLWLSTLPLRLAR*TAKGEA
Trigger: TGCCTCGCCCTTTGCCGTGCACCGCGCCAGCCTCAG...TGGAAGGGTAGAGAGCCACAGTCCCCAAATCCTATGCAATAAAGTGCCTCTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426955.6
CDS-3UTR CCA 90 bp GAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGAGTCACAGCCAAAACAATaGCATCCTTGTGTGCCACGC +
Preference number: 4 (lower is better)
Translates to: EGESTGRHFLWGQEGSRESQPKQ*HPCVPR
Trigger: GCGTGGCACACAAGGATGCCATTGTTTTGGCTGTGA...CTCCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CCA 90 bp AGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGAGGGAGTAAGAAGCAGTGGGAGGTTGATAAGCGTCTaGGGCGGGAGGGACTTCACA +
Preference number: 4 (lower is better)
Translates to: RHFLWGQEGSREGVRSSGRLISV*GGRDFT
Trigger: TGTGAAGTCCCTCCCGCCCCAGACGCTTATCAACCT...CCCACTGCTTCTTACTCCCTCCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CCA 90 bp CATAGGATTTGGGGACTGTGGCTCTCTACCCTTCCACTGTGTTGCAGGGAGCTCCAAAGGAGAAGCATCTaGCTGTCCCCCTGTGCCACC +
Preference number: 4 (lower is better)
Translates to: HRIWGLWLSTLPLCCRELQRRSI*LSPCAT
Trigger: GGTGGCACAGGGGGACAGCCAGATGCTTCTCCTTTG...GAGCTCCCTGCAACACAGTGGAAGGGTAGAGAGCCACAGTCCCCAAATCCTATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426955.6
CDS-3UTR CCA 90 bp GAGGAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTATCCAGGATCCGTGACTaGGTCTGTCAGAGCATCAGT +
Preference number: 4 (lower is better)
Translates to: EERERAQAGTFCGGKRALSRIRD*VCQSIS
Trigger: ACTGATGCTCTGACAGACCCAGTCACGGATCCTGGA...TAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CCA 90 bp ACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGAGGGAGTAAGAAGCCCCCCAAAGCACGCTTaGAGTTGCCATTTTGGTCCG +
Preference number: 4 (lower is better)
Translates to: TGRHFLWGQEGSREGVRSPPKHA*SCHFGP
Trigger: CGGACCAAAATGGCAACTCCAAGCGTGCTTTGGGGG...GCTTCTTACTCCCTCCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR GCA 90 bp GAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGTGTGTGCCACGCTGCTaGTATCCAAAAGGAAGAGTA +
Preference number: 4 (lower is better)
Translates to: ERERAQAGTFCGGKRALGCVPRC*YPKGRV
Trigger: TACTCTTCCTTTTGGATAGCAGCAGCGTGGCACACA...CCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR GCA 90 bp ACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGAGGGAGTAAGAAGCACGAGGACTGAAAGATaGGGCGCCATATGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: TGRHFLWGQEGSREGVRSTRTER*GAIWLC
Trigger: ACACAGCCATATGGCGCCGCATCTTTCAGTCCTCGT...GCTTCTTACTCCCTCCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR GCA 90 bp AGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGAGGGAGTAAGAAGCAGTGGGAAGCACGCTTGGAGTTaGCATTTTGGTCCGAGTCCC +
Preference number: 4 (lower is better)
Translates to: RHFLWGQEGSREGVRSSGKHAWS*HFGPSP
Trigger: GGGACTCGGACCAAAATGGCAACTCCAAGCGTGCTT...CCCACTGCTTCTTACTCCCTCCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR GCA 90 bp ACTTTATTGCATAGGATTTGGGGACTGTGGCTCTCTACCCTTCCACTGTGTTGCAGGGCAGCTCCCGGCTaGTGTGCAGGGTCACCGTCA +
Preference number: 4 (lower is better)
Translates to: TLLHRIWGLWLSTLPLCCRAAPG*CAGSPS
Trigger: TGACGGTGACCCTGCACAGCAGCCGGGAGCTGCCCT...GCAACACAGTGGAAGGGTAGAGAGCCACAGTCCCCAAATCCTATGCAATAAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426955.6
CDS-3UTR CCA 90 bp GAGGAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTATCACAGCCAAAACAATaGCATCCTTGTGTGCCACGC +
Preference number: 4 (lower is better)
Translates to: EERERAQAGTFCGGKRALSQPKQ*HPCVPR
Trigger: GCGTGGCACACAAGGATGCCATTGTTTTGGCTGTGA...TAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CCA 90 bp CTAAGAGGCACTTTATTGCATAGGATTTGGGGACTGTGGCTCTCTACCCTTCCAGCAGCTGGTGGCAGGTaGGCCCCAGCCCAAAGGAGA +
Preference number: 4 (lower is better)
Translates to: LRGTLLHRIWGLWLSTLPAAGGR*APAQRR
Trigger: TCTCCTTTGGGCTGGGGCCCACCTGCCACCAGCTGC...TGGAAGGGTAGAGAGCCACAGTCCCCAAATCCTATGCAATAAAGTGCCTCTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426955.6
CDS-3UTR CCA 90 bp CATAGGATTTGGGGACTGTGGCTCTCTACCCTTCCACTGTGTTGCAGGGAGCTCTGTAGCTGCAGGTTTTaGTCCCAGTGGCGCAGTAGC +
Preference number: 4 (lower is better)
Translates to: HRIWGLWLSTLPLCCRELCSCRF*SQWRSS
Trigger: GCTACTGCGCCACTGGGACCAAAACCTGCAGCTACA...GAGCTCCCTGCAACACAGTGGAAGGGTAGAGAGCCACAGTCCCCAAATCCTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426955.6
CDS-3UTR TCA 90 bp CTAAGAGGCACTTTATTGCATAGGATTTGGGGACTGTGGCTCTCTACCCTTCCATGGGTGAGGCAGCAGTaGGCAGGAACAGCTGCCGAG +
Preference number: 4 (lower is better)
Translates to: LRGTLLHRIWGLWLSTLPWVRQQ*AGTAAE
Trigger: CTCGGCAGCTGTTCCTGCTCACTGCTGCCTCACCCA...TGGAAGGGTAGAGAGCCACAGTCCCCAAATCCTATGCAATAAAGTGCCTCTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426955.6
CDS-3UTR GCA 90 bp GAGGAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTATGTGTGCCACGCTGCTaGTATCCAAAAGGAAGAGTA +
Preference number: 4 (lower is better)
Translates to: EERERAQAGTFCGGKRALCVPRC*YPKGRV
Trigger: TACTCTTCCTTTTGGATAGCAGCAGCGTGGCACACA...TAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR GCA 90 bp CATAGGATTTGGGGACTGTGGCTCTCTACCCTTCCACTGTGTTGCAGGGAGCTCACGAGGACTGAAAGATaGGGCGCCATATGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: HRIWGLWLSTLPLCCRELTRTER*GAIWLC
Trigger: ACACAGCCATATGGCGCCGCATCTTTCAGTCCTCGT...GAGCTCCCTGCAACACAGTGGAAGGGTAGAGAGCCACAGTCCCCAAATCCTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426955.6
CDS-3UTR CCA 90 bp GGAGGAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTTTATTGCATAGGATTTaGGGACTGTGGCTCTCTACC +
Preference number: 4 (lower is better)
Translates to: GGEGESTGRHFLWGQEGSLLHRI*GLWLST
Trigger: GGTAGAGAGCCACAGTCCCCAAATCCTATGCAATAA...AGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTCCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000426955.6
CDS-3UTR TCA 90 bp ACTTTATTGCATAGGATTTGGGGACTGTGGCTCTCTACCCTTCCACTGTGTTGCTGTTCCCAGTGGCTCTaGGGTGCCAGTGGGCTCAGT +
Preference number: 4 (lower is better)
Translates to: TLLHRIWGLWLSTLPLCCCSQWL*GASGLS
Trigger: ACTGAGCCCACTGGCACCTCAGAGCCACTGGGAACA...GCAACACAGTGGAAGGGTAGAGAGCCACAGTCCCCAAATCCTATGCAATAAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426955.6
CDS-3UTR CCA 90 bp CTAAGAGGCACTTTATTGCATAGGATTTGGGGACTGTGGCTCTCTACCCTTCCAGGCCTCTTCTGGGGATaGAAACACGGACCCACCCGA +
Preference number: 4 (lower is better)
Translates to: LRGTLLHRIWGLWLSTLPGLFWG*KHGPTR
Trigger: TCGGGTGGGTCCGTGTTTCCATCCCCAGAAGAGGCC...TGGAAGGGTAGAGAGCCACAGTCCCCAAATCCTATGCAATAAAGTGCCTCTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426955.6
CDS-3UTR TCA 90 bp ACTTTATTGCATAGGATTTGGGGACTGTGGCTCTCTACCCTTCCACTGTGTTGCTGGCAGAGCAGTGGGTaGGCACATACTGCTCCCGAA +
Preference number: 4 (lower is better)
Translates to: TLLHRIWGLWLSTLPLCCWQSSG*AHTAPE
Trigger: TTCGGGAGCAGTATGTGCTCACCCACTGCTCTGCCA...GCAACACAGTGGAAGGGTAGAGAGCCACAGTCCCCAAATCCTATGCAATAAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426955.6
CDS-3UTR CCA 90 bp CTAAGAGGCACTTTATTGCATAGGATTTGGGGACTGTGGCTCTCTACCCTTCCAAGATGCGGCGCCATATaGCTGTGTCAGAGGGGTTGG +
Preference number: 4 (lower is better)
Translates to: LRGTLLHRIWGLWLSTLPRCGAI*LCQRGW
Trigger: CCAACCCCTCTGACACAGCCATATGGCGCCGCATCT...TGGAAGGGTAGAGAGCCACAGTCCCCAAATCCTATGCAATAAAGTGCCTCTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426955.6
CDS-3UTR CCA 90 bp CTAAGAGGCACTTTATTGCATAGGATTTGGGGACTGTGGCTCTCTACCCTTCCACCTTCACACGTTCGCTaGGCTGTAGCACAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: LRGTLLHRIWGLWLSTLPPSHVR*AVAQQV
Trigger: CACCTGCTGTGCTACAGCCCAGCGAACGTGTGAAGG...TGGAAGGGTAGAGAGCCACAGTCCCCAAATCCTATGCAATAAAGTGCCTCTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426955.6
CDS-3UTR CCA 90 bp CTAAGAGGCACTTTATTGCATAGGATTTGGGGACTGTGGCTCTCTACCCTTCCAGCTCTCTGGGAAGAGTaGCTGCACCAACGTCCCAAA +
Preference number: 4 (lower is better)
Translates to: LRGTLLHRIWGLWLSTLPALWEE*LHQRPK
Trigger: TTTGGGACGTTGGTGCAGCCACTCTTCCCAGAGAGC...TGGAAGGGTAGAGAGCCACAGTCCCCAAATCCTATGCAATAAAGTGCCTCTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426955.6
CDS-3UTR CCA 90 bp CTAAGAGGCACTTTATTGCATAGGATTTGGGGACTGTGGCTCTCTACCCTTCCATTGGAGTTGCCATTTTaGTCCGAGTCCCAGGCGCCT +
Preference number: 4 (lower is better)
Translates to: LRGTLLHRIWGLWLSTLPLELPF*SESQAP
Trigger: AGGCGCCTGGGACTCGGACCAAAATGGCAACTCCAA...TGGAAGGGTAGAGAGCCACAGTCCCCAAATCCTATGCAATAAAGTGCCTCTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426955.6
CDS-3UTR CCA 90 bp ACTTTATTGCATAGGATTTGGGGACTGTGGCTCTCTACCCTTCCACTGTGTTGCAGGATTTGGGGACTGTaGCTCTCTACCCTTCCACTG +
Preference number: 4 (lower is better)
Translates to: TLLHRIWGLWLSTLPLCCRIWGL*LSTLPL
Trigger: CAGTGGAAGGGTAGAGAGCCACAGTCCCCAAATCCT...GCAACACAGTGGAAGGGTAGAGAGCCACAGTCCCCAAATCCTATGCAATAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426955.6
CDS-3UTR GCA 90 bp ACTTTATTGCATAGGATTTGGGGACTGTGGCTCTCTACCCTTCCACTGTGTTGCCCTTGTGTGCCACGCTaGTGCTATCCAAAAGGAAGA +
Preference number: 4 (lower is better)
Translates to: TLLHRIWGLWLSTLPLCCPCVPR*CYPKGR
Trigger: TCTTCCTTTTGGATAGCAGCAGCGTGGCACACAAGG...GCAACACAGTGGAAGGGTAGAGAGCCACAGTCCCCAAATCCTATGCAATAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426955.6
CDS-3UTR GCA 90 bp CTAAGAGGCACTTTATTGCATAGGATTTGGGGACTGTGGCTCTCTACCCTTCCAAATGGCATCCTTGTGTaGCACGCTGCTGCTATCCAA +
Preference number: 4 (lower is better)
Translates to: LRGTLLHRIWGLWLSTLPNGILV*HAAAIQ
Trigger: TTGGATAGCAGCAGCGTGGCACACAAGGATGCCATT...TGGAAGGGTAGAGAGCCACAGTCCCCAAATCCTATGCAATAAAGTGCCTCTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426955.6
CDS GCA 90 bp AGGCGAGTGCTACGGCAGTGGCCCAGGTCCGGCCCCGCAGGTCGGTaGCGCCCAGCCCTTCCGCCCCCTCGGAGGCCTCGGTGTCTGAGC +
Preference number: 5 (lower is better)
Translates to: RRVLRQWPRSGPAGR*RPALPPPRRPRCLS
Trigger: GCTCAGACACCGAGGCCTCCGAGGGGGCGGAAGGGCTGGGCGGCACCGACCTGCGGGGCCGGACCTGGGCCACTGCCGTAGCACTCGCCT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273794.5
ENST00000426955.6
ENST00000461141.5
CDS CCA 90 bp AGGCAGCGGCGCATCGGTGCTCCAGCCAGGCGAGTGCTACGGCAGTaGCCCAGGTCCGGCCCCGCAGGTCGGTGCCGCCCAGCCCTTCCG +
Preference number: 5 (lower is better)
Translates to: RQRRIGAPARRVLRQ*PRSGPAGRCRPALP
Trigger: CGGAAGGGCTGGGCGGCACCGACCTGCGGGGCCGGACCTGGGCCACTGCCGTAGCACTCGCCTGGCTGGAGCACCGATGCGCCGCTGCCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273794.5
ENST00000426955.6
ENST00000461141.5
CDS GCA 90 bp CCACTCGTCGAAGGCAGCGGCGCATCGGTGCTCCAGCCAGGCGAGTaGTACGGCAGTGGCCCAGGTCCGGCCCCGCAGGTCGGTGCCGCC +
Preference number: 5 (lower is better)
Translates to: PLVEGSGASVLQPGE*YGSGPGPAPQVGAA
Trigger: GGCGGCACCGACCTGCGGGGCCGGACCTGGGCCACTGCCGTAGCACTCGCCTGGCTGGAGCACCGATGCGCCGCTGCCTTCGACGAGTGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273794.5
ENST00000426955.6
ENST00000461141.5
CDS GCA 90 bp CTGGCGCGGTGCACGGCAAAGGGCGAGGCACGGCAGAGGCGCTCCTaGGAGATGCGCACAGCGGCGCAGAAGGGCGCGTCCAGGCGGAAG +
Preference number: 5 (lower is better)
Translates to: LARCTAKGEARQRRS*EMRTAAQKGASRRK
Trigger: CTTCCGCCTGGACGCGCCCTTCTGCGCCGCTGTGCGCATCTCGCAGGAGCGCCTCTGCCGTGCCTCGCCCTTTGCCGTGCACCGCGCCAG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273794.5
ENST00000426955.6
ENST00000461141.5
CDS GCA 90 bp GGTGCACGGCAAAGGGCGAGGCACGGCAGAGGCGCTCCTGCGAGATaGGCACAGCGGCGCAGAAGGGCGCGTCCAGGCGGAAGGAGCCTG +
Preference number: 5 (lower is better)
Translates to: GARQRARHGRGAPAR*AQRRRRARPGGRSL
Trigger: CAGGCTCCTTCCGCCTGGACGCGCCCTTCTGCGCCGCTGTGCGCATCTCGCAGGAGCGCCTCTGCCGTGCCTCGCCCTTTGCCGTGCACC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273794.5
ENST00000426955.6
ENST00000461141.5
CDS TCA 90 bp GGTCCCAGTGGCGCAGTAGCAGGAAGAGCCCTCGGGCTGCGGCCTTaGGGGCGGCCAGGTCAAGGCCGTCAGGCAAGTGCTGGGCCCGCA +
Preference number: 5 (lower is better)
Translates to: GPSGAVAGRALGLRP*GRPGQGRQASAGPA
Trigger: TGCGGGCCCAGCACTTGCCTGACGGCCTTGACCTGGCCGCCCTCAAGGCCGCAGCCCGAGGGCTCTTCCTGCTACTGCGCCACTGGGACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273794.5
ENST00000426955.6
ENST00000461141.5
CDS GCA 90 bp AGTGCCCAGGGCAATGAGGCCGAGGTGGGGCTGAGGCTGGCGCGGTaGACGGCAAAGGGCGAGGCACGGCAGAGGCGCTCCTGCGAGATG +
Preference number: 5 (lower is better)
Translates to: SAQGNEAEVGLRLAR*TAKGEARQRRSCEM
Trigger: CATCTCGCAGGAGCGCCTCTGCCGTGCCTCGCCCTTTGCCGTGCACCGCGCCAGCCTCAGCCCCACCTCGGCCTCATTGCCCTGGGCACT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273794.5
ENST00000426955.6
ENST00000461141.5
CDS CCA 90 bp CCCGAGCTGGGGGACGGGCTGCAGGAGGCCGTGGCACTGTCACCCTaGCCAACACCAGGGCCCAGAAGTGCCCAGGGCAATGAGGCCGAG +
Preference number: 5 (lower is better)
Translates to: PELGDGLQEAVALSP*PTPGPRSAQGNEAE
Trigger: CTCGGCCTCATTGCCCTGGGCACTTCTGGGCCCTGGTGTTGGCCAGGGTGACAGTGCCACGGCCTCCTGCAGCCCGTCCCCCAGCTCGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273794.5
ENST00000426955.6
ENST00000461141.5
CDS GCA 90 bp TTGGCCGCTGTCAGTTCCCACTCGTCGAAGGCAGCGGCGCATCGGTaGTCCAGCCAGGCGAGTGCTACGGCAGTGGCCCAGGTCCGGCCC +
Preference number: 5 (lower is better)
Translates to: LAAVSSHSSKAAAHR*SSQASATAVAQVRP
Trigger: GGGCCGGACCTGGGCCACTGCCGTAGCACTCGCCTGGCTGGAGCACCGATGCGCCGCTGCCTTCGACGAGTGGGAACTGACAGCGGCCAA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273794.5
ENST00000426955.6
ENST00000461141.5
CDS GCA 90 bp CGGGCTGCGGCCTTGAGGGCGGCCAGGTCAAGGCCGTCAGGCAAGTaGTGGGCCCGCAGCCAGCAATCAGCCTTGGCCGCTGTCAGTTCC +
Preference number: 5 (lower is better)
Translates to: RAAALRAARSRPSGK*WARSQQSALAAVSS
Trigger: GGAACTGACAGCGGCCAAGGCTGATTGCTGGCTGCGGGCCCAGCACTTGCCTGACGGCCTTGACCTGGCCGCCCTCAAGGCCGCAGCCCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273794.5
ENST00000426955.6
ENST00000461141.5
CDS CCA 90 bp TTTGTGACGGCGGCCCATGCTGAGCCGACAGGGAGGACGGGGAGGTaGGCGGCGAGGACCTTCCGTGGGAGTGGCAGGGTCCCCCAAAGC +
Preference number: 5 (lower is better)
Translates to: FVTAAHAEPTGRTGR*AARTFRGSGRVPQS
Trigger: GCTTTGGGGGACCCTGCCACTCCCACGGAAGGTCCTCGCCGCCCACCTCCCCGTCCTCCCTGTCGGCTCAGCATGGGCCGCCGTCACAAA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000273794.5
ENST00000426955.6
ENST00000461141.5
ENST00000493493.1
CDS TCA 90 bp ACTGTCACCCTGGCCAACACCAGGGCCCAGAAGTGCCCAGGGCAATaGGGCCGAGGTGGGGCTGAGGCTGGCGCGGTGCACGGCAAAGGG +
Preference number: 5 (lower is better)
Translates to: TVTLANTRAQKCPGQ*GRGGAEAGAVHGKG
Trigger: CCCTTTGCCGTGCACCGCGCCAGCCTCAGCCCCACCTCGGCCTCATTGCCCTGGGCACTTCTGGGCCCTGGTGTTGGCCAGGGTGACAGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273794.5
ENST00000426955.6
ENST00000461141.5
CDS CCA 90 bp GCTGCGGCCTTGAGGGCGGCCAGGTCAAGGCCGTCAGGCAAGTGCTaGGCCCGCAGCCAGCAATCAGCCTTGGCCGCTGTCAGTTCCCAC +
Preference number: 5 (lower is better)
Translates to: AAALRAARSRPSGKC*ARSQQSALAAVSSH
Trigger: GTGGGAACTGACAGCGGCCAAGGCTGATTGCTGGCTGCGGGCCCAGCACTTGCCTGACGGCCTTGACCTGGCCGCCCTCAAGGCCGCAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273794.5
ENST00000426955.6
ENST00000461141.5
CDS GCA 90 bp CTCGGCGGGCCCTCACCCGGGCCTCATATTCTGCTGAGCTCAGGCTaGCGCCCTCCAGCATCAGGTGTGGCTGATGGGGCTCACTGGGGT +
Preference number: 5 (lower is better)
Translates to: LGGPSPGPHILLSSG*RPPASGVADGAHWG
Trigger: ACCCCAGTGAGCCCCATCAGCCACACCTGATGCTGGAGGGCGGCAGCCTGAGCTCAGCAGAATATGAGGCCCGGGTGAGGGCCCGCCGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273794.5
ENST00000426955.6
ENST00000497229.1
CDS-3UTR CAA 90 bp GGAGGAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTCTGAGGCAGGGGCCGTaGGCGCAGGCCCGGACCCAG +
Preference number: 5 (lower is better)
Translates to: GGEGESTGRHFLWGQEGSLRQGP*AQARTQ
Trigger: CTGGGTCCGGGCCTGCGCCAACGGCCCCTGCCTCAG...AGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTCCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000426955.6
CDS TCA 90 bp CCTTCACTGTTGTTGGCCTGGCCCGGGTCAGGGCTACAGAGTTTGTaGCGGCGGCCCATGCTGAGCCGACAGGGAGGACGGGGAGGTGGG +
Preference number: 5 (lower is better)
Translates to: PSLLLAWPGSGLQSL*RRPMLSRQGGRGGG
Trigger: CCCACCTCCCCGTCCTCCCTGTCGGCTCAGCATGGGCCGCCGTCACAAACTCTGTAGCCCTGACCCGGGCCAGGCCAACAACAGTGAAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273794.5
ENST00000426955.6
ENST00000461141.5
ENST00000493493.1
CDS GCA 90 bp ACATGCAGCACCCCGTCAGGCCTTGAGGGCAGCTCCCGGCTGCTGTaGAGGGTCACCGTCATGGTGCCAGCCGCGGCGATAATGCCTGTG +
Preference number: 5 (lower is better)
Translates to: TCSTPSGLEGSSRLL*RVTVMVPAAAIMPV
Trigger: CACAGGCATTATCGCCGCGGCTGGCACCATGACGGTGACCCTGCACAGCAGCCGGGAGCTGCCCTCAAGGCCTGACGGGGTGCTGCATGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426955.6
ENST00000497229.1
CDS CCA 90 bp CAAGGCCGTCAGGCAAGTGCTGGGCCCGCAGCCAGCAATCAGCCTTaGCCGCTGTCAGTTCCCACTCGTCGAAGGCAGCGGCGCATCGGT +
Preference number: 5 (lower is better)
Translates to: QGRQASAGPAASNQP*PLSVPTRRRQRRIG
Trigger: ACCGATGCGCCGCTGCCTTCGACGAGTGGGAACTGACAGCGGCCAAGGCTGATTGCTGGCTGCGGGCCCAGCACTTGCCTGACGGCCTTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273794.5
ENST00000426955.6
ENST00000461141.5
CDS-3UTR CAA 90 bp GAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGAGGGGTCGGCCGGGGACTaGGTTTGCCCGGCCTGGAGG +
Preference number: 5 (lower is better)
Translates to: EGESTGRHFLWGQEGSREGSAGD*VCPAWR
Trigger: CCTCCAGGCCGGGCAAACCAAGTCCCCGGCCGACCC...CTCCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CAA 90 bp GGAGGAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTGCACCCCGTCAGGCCTaGAGGGCAGCTCCCGGCTGC +
Preference number: 5 (lower is better)
Translates to: GGEGESTGRHFLWGQEGSAPRQA*RAAPGC
Trigger: GCAGCCGGGAGCTGCCCTCAAGGCCTGACGGGGTGC...AGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTCCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000426955.6
CDS TCA 90 bp CCACCTCATGAGCTCCAGGGTTCGGTGGGTAGTGGCGGCCATGGGTaGGGCAGCAGTGAGCAGGAACAGCTGCCGAGGGTAGGCCCTGTG +
Preference number: 5 (lower is better)
Translates to: PPHELQGSVGSGGHG*GSSEQEQLPRVGPV
Trigger: CACAGGGCCTACCCTCGGCAGCTGTTCCTGCTCACTGCTGCCTCACCCATGGCCGCCACTACCCACCGAACCCTGGAGCTCATGAGGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273794.5
ENST00000426955.6
ENST00000461141.5
ENST00000474580.1
CDS TCA 90 bp CAGGCTCTTGGCCCCCTGGTGGGCGGGACCGGAAGCCATCCACCCTaGAGAGTGAGCAGTAACCGAGCAGCTGGTCCCCAGGGTAGAGTG +
Preference number: 5 (lower is better)
Translates to: QALGPLVGGTGSHPP*RVSSNRAAGPQGRV
Trigger: CACTCTACCCTGGGGACCAGCTGCTCGGTTACTGCTCACTCTTCAGGGTGGATGGCTTCCGGTCCCGCCCACCAGGGGGCCAAGAGCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273794.5
ENST00000426955.6
ENST00000461141.5
CDS GCA 90 bp GGGGTGCAGCAGGATCTCCAAGGCCCGGTCACAGTGGTGGCCCTCTaGCAGTGTGACACAGATGGTGGCTGCAGAGCTGGCATGAGGGGG +
Preference number: 5 (lower is better)
Translates to: GVQQDLQGPVTVVAL*QCDTDGGCRAGMRG
Trigger: CCCCCTCATGCCAGCTCTGCAGCCACCATCTGTGTCACACTGGCAGAGGGCCACCACTGTGACCGGGCCTTGGAGATCCTGCTGCACCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273794.5
ENST00000426955.6
ENST00000497229.1
CDS CCA 90 bp GGCGAGGACCTTCCGTGGGAGTGGCAGGGTCCCCCAAAGCACGCTTaGAGTTGCCATTTTGGTCCGAGTCCCAGGCGCCTGCTGGAGAGC +
Preference number: 5 (lower is better)
Translates to: GEDLPWEWQGPPKHA*SCHFGPSPRRLLES
Trigger: GCTCTCCAGCAGGCGCCTGGGACTCGGACCAAAATGGCAACTCCAAGCGTGCTTTGGGGGACCCTGCCACTCCCACGGAAGGTCCTCGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000273794.5
ENST00000426955.6
ENST00000461141.5
ENST00000493493.1
CDS TCA 90 bp CCTCTGAAAATCTCGGCGGGCCCTCACCCGGGCCTCATATTCTGCTaGGCTCAGGCTGCCGCCCTCCAGCATCAGGTGTGGCTGATGGGG +
Preference number: 5 (lower is better)
Translates to: PLKISAGPHPGLIFC*AQAAALQHQVWLMG
Trigger: CCCCATCAGCCACACCTGATGCTGGAGGGCGGCAGCCTGAGCTCAGCAGAATATGAGGCCCGGGTGAGGGCCCGCCGAGATTTTCAGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273794.5
ENST00000426955.6
ENST00000461141.5
ENST00000497229.1
CDS CCA 90 bp GGCTCACTGGGGTGCAGCAGGATCTCCAAGGCCCGGTCACAGTGGTaGCCCTCTGCCAGTGTGACACAGATGGTGGCTGCAGAGCTGGCA +
Preference number: 5 (lower is better)
Translates to: GSLGCSRISKARSQW*PSASVTQMVAAELA
Trigger: TGCCAGCTCTGCAGCCACCATCTGTGTCACACTGGCAGAGGGCCACCACTGTGACCGGGCCTTGGAGATCCTGCTGCACCCCAGTGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273794.5
ENST00000426955.6
ENST00000497229.1
CDS CCA 90 bp TGGGGCTCACTGGGGTGCAGCAGGATCTCCAAGGCCCGGTCACAGTaGTGGCCCTCTGCCAGTGTGACACAGATGGTGGCTGCAGAGCTG +
Preference number: 5 (lower is better)
Translates to: WGSLGCSRISKARSQ*WPSASVTQMVAAEL
Trigger: CAGCTCTGCAGCCACCATCTGTGTCACACTGGCAGAGGGCCACCACTGTGACCGGGCCTTGGAGATCCTGCTGCACCCCAGTGAGCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273794.5
ENST00000426955.6
ENST00000497229.1
CDS CCA 90 bp GGGCAGAAGCTCAGCGCCAGCACGGGGTTCAGCAGGATGTCCTTGTaGAAGCGTCGCTGCAGGAACCACACCTGCCGGTCCCCATCACTG +
Preference number: 5 (lower is better)
Translates to: GQKLSASTGFSRMSL*KRRCRNHTCRSPSL
Trigger: CAGTGATGGGGACCGGCAGGTGTGGTTCCTGCAGCGACGCTTCCACAAGGACATCCTGCTGAACCCCGTGCTGGCGCTGAGCTTCTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273794.5
ENST00000426955.6
ENST00000461141.5
CDS CCA 90 bp CTCCCGAGTAGCTGTCCCCAGGTGTCCGGGCTTGGAGCTCAGGTCTaGGCAGAAGCTCAGCGCCAGCACGGGGTTCAGCAGGATGTCCTT +
Preference number: 5 (lower is better)
Translates to: LPSSCPQVSGLGAQV*AEAQRQHGVQQDVL
Trigger: AAGGACATCCTGCTGAACCCCGTGCTGGCGCTGAGCTTCTGCCCAGACCTGAGCTCCAAGCCCGGACACCTGGGGACAGCTACTCGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273794.5
ENST00000426955.6
ENST00000461141.5
ENST00000474580.1
CDS CCA 90 bp GCCGCACCAAGGGCAGGTAGTCATGGTCGCTGCCTTCACTGTTGTTaGCCTGGCCCGGGTCAGGGCTACAGAGTTTGTGACGGCGGCCCA +
Preference number: 5 (lower is better)
Translates to: AAPRAGSHGRCLHCC*PGPGQGYRVCDGGP
Trigger: TGGGCCGCCGTCACAAACTCTGTAGCCCTGACCCGGGCCAGGCCAACAACAGTGAAGGCAGCGACCATGACTACCTGCCCTTGGTGCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273794.5
ENST00000426955.6
ENST00000461141.5
CDS-3UTR CAA 90 bp TTTCCCAGCACCAAGAGGCCAGCCCTGGGCGGCAGTGACTTGAGTGTGTTGGGTCCCAGGTGTCCGGGCTaGGAGCTCAGGTCTGGGCAG +
Preference number: 5 (lower is better)
Translates to: FPSTKRPALGGSDLSVLGPRCPG*ELRSGQ
Trigger: CTGCCCAGACCTGAGCTCCAAGCCCGGACACCTGGG...ACCCAACACACTCAAGTCACTGCCGCCCAGGGCTGGCCTCTTGGTGCTGGGAAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CAA 90 bp GAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGCCCAGGTGTCCGGGCTaGGAGCTCAGGTCTGGGCAG +
Preference number: 5 (lower is better)
Translates to: ERERAQAGTFCGGKRALGPRCPG*ELRSGQ
Trigger: CTGCCCAGACCTGAGCTCCAAGCCCGGACACCTGGG...CCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CAA 90 bp AGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGAGGGAGTAAGAAGCAGTGGGCTGCCAGCCAGGCTCTaGGCCCCCTGGTGGGCGGGA +
Preference number: 5 (lower is better)
Translates to: RHFLWGQEGSREGVRSSGLPARL*APWWAG
Trigger: TCCCGCCCACCAGGGGGCCAAGAGCCTGGCTGGCAG...CCCACTGCTTCTTACTCCCTCCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CAA 90 bp ACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGAGGGAGTAAGAAGCCTGCCAGCCAGGCTCTaGGCCCCCTGGTGGGCGGGA +
Preference number: 5 (lower is better)
Translates to: TGRHFLWGQEGSREGVRSLPARL*APWWAG
Trigger: TCCCGCCCACCAGGGGGCCAAGAGCCTGGCTGGCAG...GCTTCTTACTCCCTCCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS GCA 90 bp CAGCCAGCACGTCTGGGGGCCCACTCGGAACCTGCAGGGTCTCAATaGTCTCGCAGATCAGCTGCACAGCATCATCACTGCAAGGCCGGC +
Preference number: 5 (lower is better)
Translates to: QPARLGAHSEPAGSQ*SRRSAAQHHHCKAG
Trigger: GCCGGCCTTGCAGTGATGATGCTGTGCAGCTGATCTGCGAGAGCATTGAGACCCTGCAGGTTCCGAGTGGGCCCCCAGACGTGCTGGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000273794.5
ENST00000426955.6
ENST00000461141.5
ENST00000474580.1
CDS GCA 90 bp AGACAGTGCCTGTTCCCAGTGGCTCTGAGGTGCCAGTGGGCTCAGTaGCAGGGCTGGCAGCAGACGGGGCCTCTTCTGGGGATGGAAACA +
Preference number: 5 (lower is better)
Translates to: RQCLFPVALRCQWAQ*QGWQQTGPLLGMET
Trigger: TGTTTCCATCCCCAGAAGAGGCCCCGTCTGCTGCCAGCCCTGGCACTGAGCCCACTGGCACCTCAGAGCCACTGGGAACAGGCACTGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273794.5
ENST00000426955.6
ENST00000461141.5
CDS GCA 90 bp GACCTTCCGTGGGAGTGGCAGGGTCCCCCAAAGCACGCTTGGAGTTaGCATTTTGGTCCGAGTCCCAGGCGCCTGCTGGAGAGCCTCTCT +
Preference number: 5 (lower is better)
Translates to: DLPWEWQGPPKHAWS*HFGPSPRRLLESLS
Trigger: AGAGAGGCTCTCCAGCAGGCGCCTGGGACTCGGACCAAAATGGCAACTCCAAGCGTGCTTTGGGGGACCCTGCCACTCCCACGGAAGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000273794.5
ENST00000426955.6
ENST00000461141.5
ENST00000493493.1
CDS GCA 90 bp CTGGTGCCTCCTGCAGCCGCACCAAGGGCAGGTAGTCATGGTCGCTaGCTTCACTGTTGTTGGCCTGGCCCGGGTCAGGGCTACAGAGTT +
Preference number: 5 (lower is better)
Translates to: LVPPAAAPRAGSHGR*LHCCWPGPGQGYRV
Trigger: AACTCTGTAGCCCTGACCCGGGCCAGGCCAACAACAGTGAAGGCAGCGACCATGACTACCTGCCCTTGGTGCGGCTGCAGGAGGCACCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273794.5
ENST00000426955.6
ENST00000461141.5
CDS-3UTR CAA 90 bp GGAGGGGAGTGTGAGTGGGGTGGGAGGAGAGGGAGAGAGCACAGGCAGGCACTTGCTGTGTCAGAGGGGTaGGGTCCAGGATCCGTGACT +
Preference number: 5 (lower is better)
Translates to: GGECEWGGRRGREHRQALAVSEG*GPGSVT
Trigger: AGTCACGGATCCTGGACCCAACCCCTCTGACACAGC...AAGTGCCTGCCTGTGCTCTCTCCCTCTCCTCCCACCCCACTCACACTCCCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CAA 90 bp CATAGGATTTGGGGACTGTGGCTCTCTACCCTTCCACTGTGTTGCAGGGAGCTCGGGTCGGCCGGGGACTaGGTTTGCCCGGCCTGGAGG +
Preference number: 5 (lower is better)
Translates to: HRIWGLWLSTLPLCCRELGSAGD*VCPAWR
Trigger: CCTCCAGGCCGGGCAAACCAAGTCCCCGGCCGACCC...GAGCTCCCTGCAACACAGTGGAAGGGTAGAGAGCCACAGTCCCCAAATCCTATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426955.6
CDS-3UTR CAA 90 bp GGAGGGGAGTGTGAGTGGGGTGGGAGGAGAGGGAGAGAGCACAGGCAGGCACTTGCCTTGTCCCAACTGTaGGCCTGGCTCAGGACTTGG +
Preference number: 5 (lower is better)
Translates to: GGECEWGGRRGREHRQALALSQL*AWLRTW
Trigger: CCAAGTCCTGAGCCAGGCCAACAGTTGGGACAAGGC...AAGTGCCTGCCTGTGCTCTCTCCCTCTCCTCCCACCCCACTCACACTCCCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CAA 90 bp GGAGGAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTCTGGGCGGCAGTGACTaGAGTGTGTTGGGTGGGGCG +
Preference number: 5 (lower is better)
Translates to: GGEGESTGRHFLWGQEGSLGGSD*SVLGGA
Trigger: CGCCCCACCCAACACACTCAAGTCACTGCCGCCCAG...AGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CAA 90 bp GGAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGCCAAACACGGCCAGGTaGATAAGCGTCTGGGGCGGG +
Preference number: 5 (lower is better)
Translates to: GEGESTGRHFLWGQEGSRPNTAR*ISVWGG
Trigger: CCCGCCCCAGACGCTTATCAACCTGGCCGTGTTTGG...CCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CAA 90 bp GGAGGAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTTCGCTGCCTTCACTGTaGTTGGCCTGGCCCGGGTCA +
Preference number: 5 (lower is better)
Translates to: GGEGESTGRHFLWGQEGSSLPSL*LAWPGS
Trigger: TGACCCGGGCCAGGCCAACAACAGTGAAGGCAGCGA...AGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS TCA 90 bp TGCGGCGCCATATGGCTGTGTCAGAGGGGTTGGGTCCAGGATCCGTaGCTGGGTCTGTCAGAGCATCAGTACCTGTCTGCTCCGAGTCCC +
Preference number: 5 (lower is better)
Translates to: CGAIWLCQRGWVQDP*LGLSEHQYLSAPSP
Trigger: GGGACTCGGAGCAGACAGGTACTGATGCTCTGACAGACCCAGTCACGGATCCTGGACCCAACCCCTCTGACACAGCCATATGGCGCCGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273794.5
CDS TCA 90 bp TGCGGCGCCATATGGCTGTGTCAGAGGGGTTGGGTCCAGGATCCGTaGCTGGGTCTGTCAGAGCATCAGTACTCTGCTCCGAGTCCCTGG +
Preference number: 5 (lower is better)
Translates to: CGAIWLCQRGWVQDP*LGLSEHQYSAPSPW
Trigger: CCAGGGACTCGGAGCAGAGTACTGATGCTCTGACAGACCCAGTCACGGATCCTGGACCCAACCCCTCTGACACAGCCATATGGCGCCGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426955.6
ENST00000461141.5
CDS CCA 90 bp GAGCATCAGTACCTGTCTGCTCCGAGTCCCTGGCAGCCCATGGGCTaGACAGTTCTGCTGAGACAGTGCCTGTTCCCAGTGGCTCTGAGG +
Preference number: 5 (lower is better)
Translates to: EHQYLSAPSPWQPMG*TVLLRQCLFPVALR
Trigger: CCTCAGAGCCACTGGGAACAGGCACTGTCTCAGCAGAACTGTCCAGCCCATGGGCTGCCAGGGACTCGGAGCAGACAGGTACTGATGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273794.5
CDS CCA 90 bp GCGCCATATGGCTGTGTCAGAGGGGTTGGGTCCAGGATCCGTGACTaGGTCTGTCAGAGCATCAGTACCTGTCTGCTCCGAGTCCCTGGC +
Preference number: 5 (lower is better)
Translates to: APYGCVRGVGSRIRD*VCQSISTCLLRVPG
Trigger: GCCAGGGACTCGGAGCAGACAGGTACTGATGCTCTGACAGACCCAGTCACGGATCCTGGACCCAACCCCTCTGACACAGCCATATGGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273794.5
CDS CCA 90 bp GCGCCATATGGCTGTGTCAGAGGGGTTGGGTCCAGGATCCGTGACTaGGTCTGTCAGAGCATCAGTACTCTGCTCCGAGTCCCTGGCAGC +
Preference number: 5 (lower is better)
Translates to: APYGCVRGVGSRIRD*VCQSISTLLRVPGS
Trigger: GCTGCCAGGGACTCGGAGCAGAGTACTGATGCTCTGACAGACCCAGTCACGGATCCTGGACCCAACCCCTCTGACACAGCCATATGGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426955.6
ENST00000461141.5
CDS CCA 90 bp GTCGCTGCAGGAACCACACCTGAGCGGGGGAGTCCCAAGTCAGCCTaGGCAAGGCTTAGTGCTACTTTGTTGAGGGTGGGCAGTGGGACT +
Preference number: 5 (lower is better)
Translates to: VAAGTTPERGSPKSA*ARLSATLLRVGSGT
Trigger: AGTCCCACTGCCCACCCTCAACAAAGTAGCACTAAGCCTTGCCCAGGCTGACTTGGGACTCCCCCGCTCAGGTGTGGTTCCTGCAGCGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474580.1
CDS-3UTR CAA 90 bp GGAGGAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTCTCAAGGCCCCCACCTaGAATGGAGCTGGTGTGGGT +
Preference number: 5 (lower is better)
Translates to: GGEGESTGRHFLWGQEGSLKAPT*NGAGVG
Trigger: ACCCACACCAGCTCCATTCAAGGTGGGGGCCTTGAG...AGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CAA 90 bp GGAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGCTTGGAGTTGCCATTTaGGTCCGAGTCCCAGGCGCC +
Preference number: 5 (lower is better)
Translates to: GEGESTGRHFLWGQEGSRLGVAI*VRVPGA
Trigger: GGCGCCTGGGACTCGGACCAAAATGGCAACTCCAAG...CCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CAA 90 bp GGAGGAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGCCAGCAATCAGCCTaGGCCGCTGTCAGTTCCCAC +
Preference number: 5 (lower is better)
Translates to: GGEGESTGRHFLWGQEGSSQQSA*AAVSSH
Trigger: GTGGGAACTGACAGCGGCCAAGGCTGATTGCTGGCT...AGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CAA 90 bp GAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGAGTGACTTGAGTGTGTaGGGTGGGGCGCCAGCCCAA +
Preference number: 5 (lower is better)
Translates to: ERERAQAGTFCGGKRALGSDLSV*GGAPAQ
Trigger: TTGGGCTGGCGCCCCACCCAACACACTCAAGTCACT...CCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS GCA 90 bp TGCACAGCATCATCACTGCAAGGCCGGCTCTCTGGGAAGAGTGGCTaGACCAACGTCCCAAACACGGCCAGGTTGATAAGCGTCTGGGGC +
Preference number: 5 (lower is better)
Translates to: CTASSLQGRLSGKSG*TNVPNTARLISVWG
Trigger: GCCCCAGACGCTTATCAACCTGGCCGTGTTTGGGACGTTGGTGCAGCCACTCTTCCCAGAGAGCCGGCCTTGCAGTGATGATGCTGTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273794.5
ENST00000426955.6
ENST00000461141.5
ENST00000474580.1
CDS CCA 90 bp TCAGAGCATCAGTACTCTGCTCCGAGTCCCTGGCAGCCCATGGGCTaGACAGTTCTGCTGAGACAGTGCCTGTTCCCAGTGGCTCTGAGG +
Preference number: 5 (lower is better)
Translates to: SEHQYSAPSPWQPMG*TVLLRQCLFPVALR
Trigger: CCTCAGAGCCACTGGGAACAGGCACTGTCTCAGCAGAACTGTCCAGCCCATGGGCTGCCAGGGACTCGGAGCAGAGTACTGATGCTCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426955.6
ENST00000461141.5
CDS-3UTR CAA 90 bp GGAGGAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTTTCAGCAGGATGTCCTaGTGGAAGCGTCGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: GGEGESTGRHFLWGQEGSFSRMS*WKRRCR
Trigger: CCTGCAGCGACGCTTCCACAAGGACATCCTGCTGAA...AGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CAA 90 bp TTTCCCAGCACCAAGAGGCCAGCCCTGGGCGGCAGTGACTTGAGTGTGTTGGGTTTCAGCAGGATGTCCTaGTGGAAGCGTCGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: FPSTKRPALGGSDLSVLGFSRMS*WKRRCR
Trigger: CCTGCAGCGACGCTTCCACAAGGACATCCTGCTGAA...ACCCAACACACTCAAGTCACTGCCGCCCAGGGCTGGCCTCTTGGTGCTGGGAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CAA 90 bp GAGGAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGCTGTGTCAGAGGGGTaGGGTCCAGGATCCGTGACT +
Preference number: 5 (lower is better)
Translates to: EERERAQAGTFCGGKRALAVSEG*GPGSVT
Trigger: AGTCACGGATCCTGGACCCAACCCCTCTGACACAGC...TAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS CCA 90 bp CAGCTGCACAGCATCATCACTGCAAGGCCGGCTCTCTGGGAAGAGTaGCTGCACCAACGTCCCAAACACGGCCAGGTTGATAAGCGTCTG +
Preference number: 5 (lower is better)
Translates to: QLHSIITARPALWEE*LHQRPKHGQVDKRL
Trigger: CAGACGCTTATCAACCTGGCCGTGTTTGGGACGTTGGTGCAGCCACTCTTCCCAGAGAGCCGGCCTTGCAGTGATGATGCTGTGCAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273794.5
ENST00000426955.6
ENST00000461141.5
ENST00000474580.1
CDS CCA 90 bp CTCGCAGATCAGCTGCACAGCATCATCACTGCAAGGCCGGCTCTCTaGGAAGAGTGGCTGCACCAACGTCCCAAACACGGCCAGGTTGAT +
Preference number: 5 (lower is better)
Translates to: LADQLHSIITARPAL*EEWLHQRPKHGQVD
Trigger: ATCAACCTGGCCGTGTTTGGGACGTTGGTGCAGCCACTCTTCCCAGAGAGCCGGCCTTGCAGTGATGATGCTGTGCAGCTGATCTGCGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273794.5
ENST00000426955.6
ENST00000461141.5
ENST00000474580.1
CDS-3UTR CAA 90 bp GGAGGGGAGTGTGAGTGGGGTGGGAGGAGAGGGAGAGAGCACAGGCAGGCACTTTTGGGCCATCTAGTATaGCACCCAAAGAGGGTTTCC +
Preference number: 5 (lower is better)
Translates to: GGECEWGGRRGREHRQALLGHLV*HPKRVS
Trigger: GGAAACCCTCTTTGGGTGCAATACTAGATGGCCCAA...AAGTGCCTGCCTGTGCTCTCTCCCTCTCCTCCCACCCCACTCACACTCCCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CAA 90 bp AGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGAGGGAGTAAGAAGCAGTGGGCTTGGAGTTGCCATTTaGGTCCGAGTCCCAGGCGCC +
Preference number: 5 (lower is better)
Translates to: RHFLWGQEGSREGVRSSGLGVAI*VRVPGA
Trigger: GGCGCCTGGGACTCGGACCAAAATGGCAACTCCAAG...CCCACTGCTTCTTACTCCCTCCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CAA 90 bp GGAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGTCCCCCAAAGCACGCTaGGAGTTGCCATTTTGGTCC +
Preference number: 5 (lower is better)
Translates to: GEGESTGRHFLWGQEGSRSPKAR*ELPFWS
Trigger: GGACCAAAATGGCAACTCCAAGCGTGCTTTGGGGGA...CCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CAA 90 bp ACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGAGGGAGTAAGAAGCAGCCAGCAATCAGCCTaGGCCGCTGTCAGTTCCCAC +
Preference number: 5 (lower is better)
Translates to: TGRHFLWGQEGSREGVRSSQQSA*AAVSSH
Trigger: GTGGGAACTGACAGCGGCCAAGGCTGATTGCTGGCT...GCTTCTTACTCCCTCCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CAA 90 bp ACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGAGGGAGTAAGAAGCAGTGACTTGAGTGTGTaGGGTGGGGCGCCAGCCCAA +
Preference number: 5 (lower is better)
Translates to: TGRHFLWGQEGSREGVRSSDLSV*GGAPAQ
Trigger: TTGGGCTGGCGCCCCACCCAACACACTCAAGTCACT...GCTTCTTACTCCCTCCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CAA 90 bp GAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGTACCCTTCCACTGTGTaGCAGGGAGCTCAGAGGATG +
Preference number: 5 (lower is better)
Translates to: ERERAQAGTFCGGKRALGYPSTV*QGAQRM
Trigger: CATCCTCTGAGCTCCCTGCAACACAGTGGAAGGGTA...CCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS TCA 90 bp GCAGAGCAGTGGGTGAGCACATACTGCTCCCGAATGTACGAGGACTaGAAGATGCGGCGCCATATGGCTGTGTCAGAGGGGTTGGGTCCA +
Preference number: 5 (lower is better)
Translates to: AEQWVSTYCSRMYED*KMRRHMAVSEGLGP
Trigger: TGGACCCAACCCCTCTGACACAGCCATATGGCGCCGCATCTTTCAGTCCTCGTACATTCGGGAGCAGTATGTGCTCACCCACTGCTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273794.5
ENST00000426955.6
ENST00000461141.5
CDS-3UTR CAA 90 bp AGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGAGGGAGTAAGAAGCAGTGGGGGCCTGGCTCAGGACTaGGGCCATCTAGTATTGCAC +
Preference number: 5 (lower is better)
Translates to: RHFLWGQEGSREGVRSSGGLAQD*GHLVLH
Trigger: GTGCAATACTAGATGGCCCAAGTCCTGAGCCAGGCC...CCCACTGCTTCTTACTCCCTCCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CAA 90 bp GGAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGAAAGCACGCTTGGAGTaGCCATTTTGGTCCGAGTCC +
Preference number: 5 (lower is better)
Translates to: GEGESTGRHFLWGQEGSRKARLE*PFWSES
Trigger: GGACTCGGACCAAAATGGCAACTCCAAGCGTGCTTT...CCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS CCA 90 bp AGTGGCTGCACCAACGTCCCAAACACGGCCAGGTTGATAAGCGTCTaGGGCGGGAGGGACTTCACAGCCAAAACAATGGCATCCTTGTGT +
Preference number: 5 (lower is better)
Translates to: SGCTNVPNTARLISV*GGRDFTAKTMASLC
Trigger: ACACAAGGATGCCATTGTTTTGGCTGTGAAGTCCCTCCCGCCCCAGACGCTTATCAACCTGGCCGTGTTTGGGACGTTGGTGCAGCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273794.5
ENST00000426955.6
ENST00000461141.5
ENST00000474580.1
CDS-3UTR CAA 90 bp GAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAGGGAGAAAACAATGGCATCCTaGTGTGCCACGCTGCTGCTA +
Preference number: 5 (lower is better)
Translates to: EGESTGRHFLWGQEGSREKTMAS*CATLLL
Trigger: TAGCAGCAGCGTGGCACACAAGGATGCCATTGTTTT...CTCCCTAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CAA 90 bp GAGGAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTAAAAGCACGCTTGGAGTaGCCATTTTGGTCCGAGTCC +
Preference number: 5 (lower is better)
Translates to: EERERAQAGTFCGGKRALKARLE*PFWSES
Trigger: GGACTCGGACCAAAATGGCAACTCCAAGCGTGCTTT...TAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS GCA 90 bp CTGCTCATAAATTTCCTGCTCCTGAACCATCAGGAGCTCCCCCATTaGCCACTAAGGTGGCTCCAGAATTCTCTACTCCTCCCGGGCAGG +
Preference number: 5 (lower is better)
Translates to: LLINFLLLNHQELPH*PLRWLQNSLLLPGR
Trigger: CCTGCCCGGGAGGAGTAGAGAATTCTGGAGCCACCTTAGTGGGCAATGGGGGAGCTCCTGATGGTTCAGGAGCAGGAAATTTATGAGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497229.1
CDS CCA 90 bp TTCCTGCTCCTGAACCATCAGGAGCTCCCCCATTGCCCACTAAGGTaGCTCCAGAATTCTCTACTCCTCCCGGGCAGGAGGAATAGAGAA +
Preference number: 5 (lower is better)
Translates to: FLLLNHQELPHCPLR*LQNSLLLPGRRNRE
Trigger: TTCTCTATTCCTCCTGCCCGGGAGGAGTAGAGAATTCTGGAGCCACCTTAGTGGGCAATGGGGGAGCTCCTGATGGTTCAGGAGCAGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497229.1
CDS-3UTR CAA 90 bp GAGGAGAGGGAGAGAGCACAGGCAGGCACTTTTTGTGGGGGCAAGAGGGCTCTATTGGGCCATCTAGTATaGCACCCAAAGAGGGTTTCC +
Preference number: 5 (lower is better)
Translates to: EERERAQAGTFCGGKRALLGHLV*HPKRVS
Trigger: GGAAACCCTCTTTGGGTGCAATACTAGATGGCCCAA...TAGAGCCCTCTTGCCCCCACAAAAAGTGCCTGCCTGTGCTCTCTCCCTCTCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273794.5
ENST00000426955.6
CDS-3UTR CAA 90 bp CATAGGATTTGGGGACTGTGGCTCTCTACCCTTCCACTGTGTTGCAGGGAGCTCTCCCCCAAAGCACGCTaGGAGTTGCCATTTTGGTCC +
Preference number: 5 (lower is better)
Translates to: HRIWGLWLSTLPLCCRELSPKAR*ELPFWS
Trigger: GGACCAAAATGGCAACTCCAAGCGTGCTTTGGGGGA...GAGCTCCCTGCAACACAGTGGAAGGGTAGAGAGCCACAGTCCCCAAATCCTATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000426955.6
CDS-3UTR CAA 90 bp CATAGGATTTGGGGACTGTGGCTCTCTACCCTTCCACTGTGTTGCAGGGAGCTCTACCCTTCCACTGTGTaGCAGGGAGCTCAGAGGATG +
Preference number: 5 (lower is better)
Translates to: HRIWGLWLSTLPLCCRELYPSTV*QGAQRM
Trigger: CATCCTCTGAGCTCCCTGCAACACAGTGGAAGGGTA...GAGCTCCCTGCAACACAGTGGAAGGGTAGAGAGCCACAGTCCCCAAATCCTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426955.6
CDS-3UTR CAA 90 bp ACTTTATTGCATAGGATTTGGGGACTGTGGCTCTCTACCCTTCCACTGTGTTGCCCAAACACGGCCAGGTaGATAAGCGTCTGGGGCGGG +
Preference number: 5 (lower is better)
Translates to: TLLHRIWGLWLSTLPLCCPNTAR*ISVWGG
Trigger: CCCGCCCCAGACGCTTATCAACCTGGCCGTGTTTGG...GCAACACAGTGGAAGGGTAGAGAGCCACAGTCCCCAAATCCTATGCAATAAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426955.6
CDS-3UTR CAA 90 bp ACTTTATTGCATAGGATTTGGGGACTGTGGCTCTCTACCCTTCCACTGTGTTGCTCGCTGCCTTCACTGTaGTTGGCCTGGCCCGGGTCA +
Preference number: 5 (lower is better)
Translates to: TLLHRIWGLWLSTLPLCCSLPSL*LAWPGS
Trigger: TGACCCGGGCCAGGCCAACAACAGTGAAGGCAGCGA...GCAACACAGTGGAAGGGTAGAGAGCCACAGTCCCCAAATCCTATGCAATAAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426955.6
CDS TCA 90 bp CATCCTCTGAGACACACCCCAGAGAGATTCACATCGGCCCTCCAATaGCAATACTCATCTGTCCTCTGTGATGGTTGGTGGCAGCTGTGG +
Preference number: 5 (lower is better)
Translates to: HPLRHTPERFTSALQ*QYSSVLCDGWWQLW
Trigger: CCACAGCTGCCACCAACCATCACAGAGGACAGATGAGTATTGTCATTGGAGGGCCGATGTGAATCTCTCTGGGGTGTGTCTCAGAGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497229.1
CDS-3UTR CAA 90 bp ACTTTATTGCATAGGATTTGGGGACTGTGGCTCTCTACCCTTCCACTGTGTTGCCTCAAGGCCCCCACCTaGAATGGAGCTGGTGTGGGT +
Preference number: 5 (lower is better)
Translates to: TLLHRIWGLWLSTLPLCCLKAPT*NGAGVG
Trigger: ACCCACACCAGCTCCATTCAAGGTGGGGGCCTTGAG...GCAACACAGTGGAAGGGTAGAGAGCCACAGTCCCCAAATCCTATGCAATAAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426955.6
CDS-3UTR CAA 90 bp CTAAGAGGCACTTTATTGCATAGGATTTGGGGACTGTGGCTCTCTACCCTTCCAGCCTTGTCCCAACTGTaGGCCTGGCTCAGGACTTGG +
Preference number: 5 (lower is better)
Translates to: LRGTLLHRIWGLWLSTLPALSQL*AWLRTW
Trigger: CCAAGTCCTGAGCCAGGCCAACAGTTGGGACAAGGC...TGGAAGGGTAGAGAGCCACAGTCCCCAAATCCTATGCAATAAAGTGCCTCTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426955.6
CDS TCA 90 bp GAGATTCACATCGGCCCTCCAATGACAATACTCATCTGTCCTCTGTaGTGGTTGGTGGCAGCTGTGGAGAGATCTTACCGAGAAAAGAGG +
Preference number: 5 (lower is better)
Translates to: EIHIGPPMTILICPL*WLVAAVERSYREKR
Trigger: CCTCTTTTCTCGGTAAGATCTCTCCACAGCTGCCACCAACCATCACAGAGGACAGATGAGTATTGTCATTGGAGGGCCGATGTGAATCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497229.1
CDS CCA 72 bp CAGCAGGCGGCCTGCGAGCGGCGCCGGCTCTGCAGCTaGAAGGAGACGCGCCGTCCGGCGGCCTCGGCCTCG +
Preference number: 6 (lower is better)
Translates to: QQAACERRRLCS*KETRRPAASAS
Trigger: CGAGGCCGAGGCCGCCGGACGGCGCGTCTCCTTCCAGCTGCAGAGCCGGCGCCGCTCGCAGGCCGCCTGCTG
79% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426955.6
CDS CCA 72 bp CGCATCGGTGCTCCAGCCAGGCGAGTGCTACGGCAGTaGCCCAGGTCCGGCCCCGCAGGTCGGTGCCGCCCA +
Preference number: 6 (lower is better)
Translates to: RIGAPARRVLRQ*PRSGPAGRCRP
Trigger: TGGGCGGCACCGACCTGCGGGGCCGGACCTGGGCCACTGCCGTAGCACTCGCCTGGCTGGAGCACCGATGCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273794.5
ENST00000426955.6
ENST00000461141.5
CDS TCA 72 bp AGGGGCCGTTGGCGCAGGCCCGGACCCAGGAGTCCGTaGGCGGCAGCGGCGTCCAGCTGGAGGGGCAGTACA +
Preference number: 6 (lower is better)
Translates to: RGRWRRPGPRSP*AAAASSWRGST
Trigger: TGTACTGCCCCTCCAGCTGGACGCCGCTGCCGCTCACGGACTCCTGGGTCCGGGCCTGCGCCAACGGCCCCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426955.6
CDS GCA 72 bp CAAAGGGCGAGGCACGGCAGAGGCGCTCCTGCGAGATaGGCACAGCGGCGCAGAAGGGCGCGTCCAGGCGGA +
Preference number: 6 (lower is better)
Translates to: QRARHGRGAPAR*AQRRRRARPGG
Trigger: TCCGCCTGGACGCGCCCTTCTGCGCCGCTGTGCGCATCTCGCAGGAGCGCCTCTGCCGTGCCTCGCCCTTTG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273794.5
ENST00000426955.6
ENST00000461141.5
CDS GCA 72 bp TGCACGGCAAAGGGCGAGGCACGGCAGAGGCGCTCCTaGGAGATGCGCACAGCGGCGCAGAAGGGCGCGTCC +
Preference number: 6 (lower is better)
Translates to: CTAKGEARQRRS*EMRTAAQKGAS
Trigger: GGACGCGCCCTTCTGCGCCGCTGTGCGCATCTCGCAGGAGCGCCTCTGCCGTGCCTCGCCCTTTGCCGTGCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273794.5
ENST00000426955.6
ENST00000461141.5
CDS GCA 72 bp GCAGCACCCCGTCAGGCCTTGAGGGCAGCTCCCGGCTaGTGTGCAGGGTCACCGTCATGGTGCCAGCCGCGG +
Preference number: 6 (lower is better)
Translates to: AAPRQALRAAPG*CAGSPSWCQPR
Trigger: CCGCGGCTGGCACCATGACGGTGACCCTGCACAGCAGCCGGGAGCTGCCCTCAAGGCCTGACGGGGTGCTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426955.6
ENST00000497229.1
CDS CCA 72 bp AGCGGCGCAGAAGGGCGCGTCCAGGCGGAAGGAGCCTaGTGCCTCCTGCAGCCGCACCAAGGGCAGGTAGTC +
Preference number: 6 (lower is better)
Translates to: SGAEGRVQAEGA*CLLQPHQGQVV
Trigger: GACTACCTGCCCTTGGTGCGGCTGCAGGAGGCACCAGGCTCCTTCCGCCTGGACGCGCCCTTCTGCGCCGCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273794.5
ENST00000426955.6
ENST00000461141.5
CDS CCA 72 bp GCCAGGGCTGGCAGCAGACGGGGCCTCTTCTGGGGATaGAAACACGGACCCACCCGAGCTCTGCCAGCCAGG +
Preference number: 6 (lower is better)
Translates to: ARAGSRRGLFWG*KHGPTRALPAR
Trigger: CCTGGCTGGCAGAGCTCGGGTGGGTCCGTGTTTCCATCCCCAGAAGAGGCCCCGTCTGCTGCCAGCCCTGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273794.5
ENST00000426955.6
ENST00000461141.5
CDS CCA 72 bp GGGGACGGGCTGCAGGAGGCCGTGGCACTGTCACCCTaGCCAACACCAGGGCCCAGAAGTGCCCAGGGCAAT +
Preference number: 6 (lower is better)
Translates to: GDGLQEAVALSP*PTPGPRSAQGN
Trigger: ATTGCCCTGGGCACTTCTGGGCCCTGGTGTTGGCCAGGGTGACAGTGCCACGGCCTCCTGCAGCCCGTCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273794.5
ENST00000426955.6
ENST00000461141.5
CDS TCA 72 bp GGCCCCCTGGTGGGCGGGACCGGAAGCCATCCACCCTaGAGAGTGAGCAGTAACCGAGCAGCTGGTCCCCAG +
Preference number: 6 (lower is better)
Translates to: GPLVGGTGSHPP*RVSSNRAAGPQ
Trigger: CTGGGGACCAGCTGCTCGGTTACTGCTCACTCTTCAGGGTGGATGGCTTCCGGTCCCGCCCACCAGGGGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273794.5
ENST00000426955.6
ENST00000461141.5
CDS TCA 72 bp GCAGGTTCTCCCCAGGCCAGACTGCGGCAGCCCTGCTaGGAAGGGGGCTCCAAGGGAGCACTACCTTCGGGG +
Preference number: 6 (lower is better)
Translates to: AGSPQARLRQPC*EGGSKGALPSG
Trigger: CCCCGAAGGTAGTGCTCCCTTGGAGCCCCCTTCTCAGCAGGGCTGCCGCAGTCTGGCCTGGGGAGAACCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273794.5
ENST00000426955.6
ENST00000461141.5
CDS GCA 72 bp GTCAGTTCCCACTCGTCGAAGGCAGCGGCGCATCGGTaGTCCAGCCAGGCGAGTGCTACGGCAGTGGCCCAG +
Preference number: 6 (lower is better)
Translates to: VSSHSSKAAAHR*SSQASATAVAQ
Trigger: CTGGGCCACTGCCGTAGCACTCGCCTGGCTGGAGCACCGATGCGCCGCTGCCTTCGACGAGTGGGAACTGAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273794.5
ENST00000426955.6
ENST00000461141.5
CDS GCA 72 bp AGGCCAGGGGCCAGGCCAGGCTCCTATGGCGGTACCTaGCGGTCCCCATCACTGTCCCTTCGCTGTAGCCTC +
Preference number: 6 (lower is better)
Translates to: RPGARPGSYGGT*RSPSLSLRCSL
Trigger: GAGGCTACAGCGAAGGGACAGTGATGGGGACCGGCAGGTACCGCCATAGGAGCCTGGCCTGGCCCCTGGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497229.1
CDS CCA 72 bp CTGCCCCACGGCCCAGTCCAGAGCAGCCAGCACGTCTaGGGGCCCACTCGGAACCTGCAGGGTCTCAATGCT +
Preference number: 6 (lower is better)
Translates to: LPHGPVQSSQHV*GPTRNLQGLNA
Trigger: AGCATTGAGACCCTGCAGGTTCCGAGTGGGCCCCCAGACGTGCTGGCTGCTCTGGACTGGGCCGTGGGGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273794.5
ENST00000426955.6
ENST00000461141.5
ENST00000474580.1
CDS CCA 72 bp GACGGGGAGGTGGGCGGCGAGGACCTTCCGTGGGAGTaGCAGGGTCCCCCAAAGCACGCTTGGAGTTGCCAT +
Preference number: 6 (lower is better)
Translates to: DGEVGGEDLPWE*QGPPKHAWSCH
Trigger: ATGGCAACTCCAAGCGTGCTTTGGGGGACCCTGCCACTCCCACGGAAGGTCCTCGCCGCCCACCTCCCCGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000273794.5
ENST00000426955.6
ENST00000461141.5
ENST00000493493.1
CDS CAA 90 bp TCAAGGCCGTCAGGCAAGTGCTGGGCCCGCAGCCAGCAATCAGCCTaGGCCGCTGTCAGTTCCCACTCGTCGAAGGCAGCGGCGCATCGG +
Preference number: 6 (lower is better)
Translates to: SRPSGKCWARSQQSA*AAVSSHSSKAAAHR
Trigger: CCGATGCGCCGCTGCCTTCGACGAGTGGGAACTGACAGCGGCCAAGGCTGATTGCTGGCTGCGGGCCCAGCACTTGCCTGACGGCCTTGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273794.5
ENST00000426955.6
ENST00000461141.5
CDS TCA 72 bp TTGTTGGCCTGGCCCGGGTCAGGGCTACAGAGTTTGTaGCGGCGGCCCATGCTGAGCCGACAGGGAGGACGG +
Preference number: 6 (lower is better)
Translates to: LLAWPGSGLQSL*RRPMLSRQGGR
Trigger: CCGTCCTCCCTGTCGGCTCAGCATGGGCCGCCGTCACAAACTCTGTAGCCCTGACCCGGGCCAGGCCAACAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273794.5
ENST00000426955.6
ENST00000461141.5
ENST00000493493.1
CDS CCA 72 bp CTCAGTGCCAGGGCTGGCAGCAGACGGGGCCTCTTCTaGGGATGGAAACACGGACCCACCCGAGCTCTGCCA +
Preference number: 6 (lower is better)
Translates to: LSARAGSRRGLF*GWKHGPTRALP
Trigger: TGGCAGAGCTCGGGTGGGTCCGTGTTTCCATCCCCAGAAGAGGCCCCGTCTGCTGCCAGCCCTGGCACTGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273794.5
ENST00000426955.6
ENST00000461141.5
CDS CCA 72 bp CAGGCAAGTGCTGGGCCCGCAGCCAGCAATCAGCCTTaGCCGCTGTCAGTTCCCACTCGTCGAAGGCAGCGG +
Preference number: 6 (lower is better)
Translates to: QASAGPAASNQP*PLSVPTRRRQR
Trigger: CCGCTGCCTTCGACGAGTGGGAACTGACAGCGGCCAAGGCTGATTGCTGGCTGCGGGCCCAGCACTTGCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273794.5
ENST00000426955.6
ENST00000461141.5
CDS CCA 72 bp AATGCAGCCAAGGCCAGGGGCCAGGCCAGGCTCCTATaGCGGTACCTGCCGGTCCCCATCACTGTCCCTTCG +
Preference number: 6 (lower is better)
Translates to: NAAKARGQARLL*RYLPVPITVPS
Trigger: CGAAGGGACAGTGATGGGGACCGGCAGGTACCGCCATAGGAGCCTGGCCTGGCCCCTGGCCTTGGCTGCATT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497229.1
CDS CAA 90 bp CGGCGAGGACCTTCCGTGGGAGTGGCAGGGTCCCCCAAAGCACGCTaGGAGTTGCCATTTTGGTCCGAGTCCCAGGCGCCTGCTGGAGAG +
Preference number: 6 (lower is better)
Translates to: RRGPSVGVAGSPKAR*ELPFWSESQAPAGE
Trigger: CTCTCCAGCAGGCGCCTGGGACTCGGACCAAAATGGCAACTCCAAGCGTGCTTTGGGGGACCCTGCCACTCCCACGGAAGGTCCTCGCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000273794.5
ENST00000426955.6
ENST00000461141.5
ENST00000493493.1
CDS TCA 72 bp CCAAGGCCCGGTCACAGTGGTGGCCCTCTGCCAGTGTaGCACAGATGGTGGCTGCAGAGCTGGCATGAGGGG +
Preference number: 6 (lower is better)
Translates to: PRPGHSGGPLPV*HRWWLQSWHEG
Trigger: CCCCTCATGCCAGCTCTGCAGCCACCATCTGTGTCACACTGGCAGAGGGCCACCACTGTGACCGGGCCTTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273794.5
ENST00000426955.6
ENST00000497229.1
CDS TCA 72 bp CTGGAAGGGAGCATGAGGAGGGTCACTGGGCCACTGTaGAGGCCCCTAAACCCTCCGGCTGACTGGCCCCAG +
Preference number: 6 (lower is better)
Translates to: LEGSMRRVTGPL*RPLNPPADWPQ
Trigger: CTGGGGCCAGTCAGCCGGAGGGTTTAGGGGCCTTCACAGTGGCCCAGTGACCCTCCTCATGCTCCCTTCCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497229.1
CDS GCA 72 bp CCCTCACCCGGGCCTCATATTCTGCTGAGCTCAGGCTaGCGCCCTCCAGCATCAGGTGTGGCTGATGGGGCT +
Preference number: 6 (lower is better)
Translates to: PSPGPHILLSSG*RPPASGVADGA
Trigger: AGCCCCATCAGCCACACCTGATGCTGGAGGGCGGCAGCCTGAGCTCAGCAGAATATGAGGCCCGGGTGAGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273794.5
ENST00000426955.6
ENST00000461141.5
ENST00000497229.1
CDS CCA 72 bp CTCAGCGCCAGCACGGGGTTCAGCAGGATGTCCTTGTaGAAGCGTCGCTGCAGGAACCACACCTGCCGGTCC +
Preference number: 6 (lower is better)
Translates to: LSASTGFSRMSL*KRRCRNHTCRS
Trigger: GGACCGGCAGGTGTGGTTCCTGCAGCGACGCTTCCACAAGGACATCCTGCTGAACCCCGTGCTGGCGCTGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273794.5
ENST00000426955.6
ENST00000461141.5
CDS CAA 72 bp AGTAGCTCCCGAGTAGCTGTCCCCAGGTGTCCGGGCTaGGAGCTCAGGTCTGGGCAGAAGCTCAGCGCCAGC +
Preference number: 6 (lower is better)
Translates to: SSSRVAVPRCPG*ELRSGQKLSAS
Trigger: GCTGGCGCTGAGCTTCTGCCCAGACCTGAGCTCCAAGCCCGGACACCTGGGGACAGCTACTCGGGAGCTACT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273794.5
ENST00000426955.6
ENST00000461141.5
ENST00000474580.1
CDS CAA 72 bp TCAGGCAAGTGCTGGGCCCGCAGCCAGCAATCAGCCTaGGCCGCTGTCAGTTCCCACTCGTCGAAGGCAGCG +
Preference number: 6 (lower is better)
Translates to: SGKCWARSQQSA*AAVSSHSSKAA
Trigger: CGCTGCCTTCGACGAGTGGGAACTGACAGCGGCCAAGGCTGATTGCTGGCTGCGGGCCCAGCACTTGCCTGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273794.5
ENST00000426955.6
ENST00000461141.5
CDS CAA 90 bp GGACCTTCCGTGGGAGTGGCAGGGTCCCCCAAAGCACGCTTGGAGTaGCCATTTTGGTCCGAGTCCCAGGCGCCTGCTGGAGAGCCTCTC +
Preference number: 6 (lower is better)
Translates to: GPSVGVAGSPKARLE*PFWSESQAPAGEPL
Trigger: GAGAGGCTCTCCAGCAGGCGCCTGGGACTCGGACCAAAATGGCAACTCCAAGCGTGCTTTGGGGGACCCTGCCACTCCCACGGAAGGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000273794.5
ENST00000426955.6
ENST00000461141.5
ENST00000493493.1
CDS TCA 72 bp TGGTGGGCGGGACCGGAAGCCATCCACCCTGAAGAGTaGGCAGTAACCGAGCAGCTGGTCCCCAGGGTAGAG +
Preference number: 6 (lower is better)
Translates to: WWAGPEAIHPEE*AVTEQLVPRVE
Trigger: CTCTACCCTGGGGACCAGCTGCTCGGTTACTGCTCACTCTTCAGGGTGGATGGCTTCCGGTCCCGCCCACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273794.5
ENST00000426955.6
ENST00000461141.5
CDS GCA 72 bp CAGGATCTCCAAGGCCCGGTCACAGTGGTGGCCCTCTaGCAGTGTGACACAGATGGTGGCTGCAGAGCTGGC +
Preference number: 6 (lower is better)
Translates to: QDLQGPVTVVAL*QCDTDGGCRAG
Trigger: GCCAGCTCTGCAGCCACCATCTGTGTCACACTGGCAGAGGGCCACCACTGTGACCGGGCCTTGGAGATCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273794.5
ENST00000426955.6
ENST00000497229.1
CDS GCA 72 bp TGGGAGTGGCAGGGTCCCCCAAAGCACGCTTGGAGTTaGCATTTTGGTCCGAGTCCCAGGCGCCTGCTGGAG +
Preference number: 6 (lower is better)
Translates to: WEWQGPPKHAWS*HFGPSPRRLLE
Trigger: CTCCAGCAGGCGCCTGGGACTCGGACCAAAATGGCAACTCCAAGCGTGCTTTGGGGGACCCTGCCACTCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000273794.5
ENST00000426955.6
ENST00000461141.5
ENST00000493493.1
CDS CCA 72 bp GGGTGCAGCAGGATCTCCAAGGCCCGGTCACAGTGGTaGCCCTCTGCCAGTGTGACACAGATGGTGGCTGCA +
Preference number: 6 (lower is better)
Translates to: GCSRISKARSQW*PSASVTQMVAA
Trigger: TGCAGCCACCATCTGTGTCACACTGGCAGAGGGCCACCACTGTGACCGGGCCTTGGAGATCCTGCTGCACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273794.5
ENST00000426955.6
ENST00000497229.1
CDS CCA 72 bp CTGGGGTGCAGCAGGATCTCCAAGGCCCGGTCACAGTaGTGGCCCTCTGCCAGTGTGACACAGATGGTGGCT +
Preference number: 6 (lower is better)
Translates to: LGCSRISKARSQ*WPSASVTQMVA
Trigger: AGCCACCATCTGTGTCACACTGGCAGAGGGCCACCACTGTGACCGGGCCTTGGAGATCCTGCTGCACCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273794.5
ENST00000426955.6
ENST00000497229.1
CDS CCA 72 bp GCAGGGTCCCCCAAAGCACGCTTGGAGTTGCCATTTTaGTCCGAGTCCCAGGCGCCTGCTGGAGAGCCTCTC +
Preference number: 6 (lower is better)
Translates to: AGSPKARLELPF*SESQAPAGEPL
Trigger: GAGAGGCTCTCCAGCAGGCGCCTGGGACTCGGACCAAAATGGCAACTCCAAGCGTGCTTTGGGGGACCCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000273794.5
ENST00000426955.6
ENST00000461141.5
ENST00000493493.1
CDS CCA 72 bp CTTCCGTGGGAGTGGCAGGGTCCCCCAAAGCACGCTTaGAGTTGCCATTTTGGTCCGAGTCCCAGGCGCCTG +
Preference number: 6 (lower is better)
Translates to: LPWEWQGPPKHA*SCHFGPSPRRL
Trigger: CAGGCGCCTGGGACTCGGACCAAAATGGCAACTCCAAGCGTGCTTTGGGGGACCCTGCCACTCCCACGGAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000273794.5
ENST00000426955.6
ENST00000461141.5
ENST00000493493.1
CDS CAA 72 bp AAGCTCAGCGCCAGCACGGGGTTCAGCAGGATGTCCTaGTGGAAGCGTCGCTGCAGGAACCACACCTGCCGG +
Preference number: 6 (lower is better)
Translates to: KLSASTGFSRMS*WKRRCRNHTCR
Trigger: CCGGCAGGTGTGGTTCCTGCAGCGACGCTTCCACAAGGACATCCTGCTGAACCCCGTGCTGGCGCTGAGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273794.5
ENST00000426955.6
ENST00000461141.5
CDS CAA 72 bp GTGGGAGTGGCAGGGTCCCCCAAAGCACGCTTGGAGTaGCCATTTTGGTCCGAGTCCCAGGCGCCTGCTGGA +
Preference number: 6 (lower is better)
Translates to: VGVAGSPKARLE*PFWSESQAPAG
Trigger: TCCAGCAGGCGCCTGGGACTCGGACCAAAATGGCAACTCCAAGCGTGCTTTGGGGGACCCTGCCACTCCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000273794.5
ENST00000426955.6
ENST00000461141.5
ENST00000493493.1
CDS CAA 72 bp CCTTCCGTGGGAGTGGCAGGGTCCCCCAAAGCACGCTaGGAGTTGCCATTTTGGTCCGAGTCCCAGGCGCCT +
Preference number: 6 (lower is better)
Translates to: PSVGVAGSPKAR*ELPFWSESQAP
Trigger: AGGCGCCTGGGACTCGGACCAAAATGGCAACTCCAAGCGTGCTTTGGGGGACCCTGCCACTCCCACGGAAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000273794.5
ENST00000426955.6
ENST00000461141.5
ENST00000493493.1
CDS CAA 90 bp TCTGGGCAGAAGCTCAGCGCCAGCACGGGGTTCAGCAGGATGTCCTaGTGGAAGCGTCGCTGCAGGAACCACACCTGCCGGTCCCCATCA +
Preference number: 6 (lower is better)
Translates to: SGQKLSASTGFSRMS*WKRRCRNHTCRSPS
Trigger: TGATGGGGACCGGCAGGTGTGGTTCCTGCAGCGACGCTTCCACAAGGACATCCTGCTGAACCCCGTGCTGGCGCTGAGCTTCTGCCCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273794.5
ENST00000426955.6
ENST00000461141.5
CDS CAA 90 bp CGTGGGAGTGGCAGGGTCCCCCAAAGCACGCTTGGAGTTGCCATTTaGGTCCGAGTCCCAGGCGCCTGCTGGAGAGCCTCTCTGAAGTCC +
Preference number: 6 (lower is better)
Translates to: RGSGRVPQSTLGVAI*VRVPGACWRASLKS
Trigger: GGACTTCAGAGAGGCTCTCCAGCAGGCGCCTGGGACTCGGACCAAAATGGCAACTCCAAGCGTGCTTTGGGGGACCCTGCCACTCCCACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000273794.5
ENST00000426955.6
ENST00000461141.5
ENST00000493493.1
CDS TCA 72 bp TGCCGGTCCCCATCACTGTCCCTTCGCTGTAGCCTCTaGAAATCTCGGCGGGCCCTCACCCGGGCCTCATAT +
Preference number: 6 (lower is better)
Translates to: CRSPSLSLRCSL*KSRRALTRASY
Trigger: ATATGAGGCCCGGGTGAGGGCCCGCCGAGATTTTCAGAGGCTACAGCGAAGGGACAGTGATGGGGACCGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273794.5
ENST00000426955.6
ENST00000461141.5
ENST00000497229.1
CDS TCA 72 bp ATGTCCTTGTGGAAGCGTCGCTGCAGGAACCACACCTaGGCGGGGGAGTCCCAAGTCAGCCTGGGCAAGGCT +
Preference number: 6 (lower is better)
Translates to: MSLWKRRCRNHT*AGESQVSLGKA
Trigger: AGCCTTGCCCAGGCTGACTTGGGACTCCCCCGCTCAGGTGTGGTTCCTGCAGCGACGCTTCCACAAGGACAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474580.1
CDS GCA 72 bp AGAGCAGCCAGCACGTCTGGGGGCCCACTCGGAACCTaGAGGGTCTCAATGCTCTCGCAGATCAGCTGCACA +
Preference number: 6 (lower is better)
Translates to: RAASTSGGPLGT*RVSMLSQISCT
Trigger: TGTGCAGCTGATCTGCGAGAGCATTGAGACCCTGCAGGTTCCGAGTGGGCCCCCAGACGTGCTGGCTGCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000273794.5
ENST00000426955.6
ENST00000461141.5
ENST00000474580.1
CDS GCA 72 bp CCTCCCCGCACCCATTCCAATGTAAGCCTGCTTGCCTaGTCCTTGTGCACAAATGCAGCCAAGGCCAGGGGC +
Preference number: 6 (lower is better)
Translates to: PPRTHSNVSLLA*SLCTNAAKARG
Trigger: GCCCCTGGCCTTGGCTGCATTTGTGCACAAGGAGCAGGCAAGCAGGCTTACATTGGAATGGGTGCGGGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497229.1
CDS CCA 72 bp CAGCTGCACAGCATCATCACTGCAAGGCCGGCTCTCTaGGAAGAGTGGCTGCACCAACGTCCCAAACACGGC +
Preference number: 6 (lower is better)
Translates to: QLHSIITARPAL*EEWLHQRPKHG
Trigger: GCCGTGTTTGGGACGTTGGTGCAGCCACTCTTCCCAGAGAGCCGGCCTTGCAGTGATGATGCTGTGCAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273794.5
ENST00000426955.6
ENST00000461141.5
ENST00000474580.1
CDS CCA 72 bp GGAACCACACCTGAGCGGGGGAGTCCCAAGTCAGCCTaGGCAAGGCTTAGTGCTACTTTGTTGAGGGTGGGC +
Preference number: 6 (lower is better)
Translates to: GTTPERGSPKSA*ARLSATLLRVG
Trigger: GCCCACCCTCAACAAAGTAGCACTAAGCCTTGCCCAGGCTGACTTGGGACTCCCCCGCTCAGGTGTGGTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474580.1
CDS CCA 72 bp GGCTGTGTCAGAGGGGTTGGGTCCAGGATCCGTGACTaGGTCTGTCAGAGCATCAGTACCTGTCTGCTCCGA +
Preference number: 6 (lower is better)
Translates to: GCVRGVGSRIRD*VCQSISTCLLR
Trigger: TCGGAGCAGACAGGTACTGATGCTCTGACAGACCCAGTCACGGATCCTGGACCCAACCCCTCTGACACAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273794.5
CDS CCA 72 bp GGCTGTGTCAGAGGGGTTGGGTCCAGGATCCGTGACTaGGTCTGTCAGAGCATCAGTACTCTGCTCCGAGTC +
Preference number: 6 (lower is better)
Translates to: GCVRGVGSRIRD*VCQSISTLLRV
Trigger: GACTCGGAGCAGAGTACTGATGCTCTGACAGACCCAGTCACGGATCCTGGACCCAACCCCTCTGACACAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426955.6
ENST00000461141.5
CDS CCA 72 bp CTGAACCATCAGGAGCTCCCCCATTGCCCACTAAGGTaGCTCCAGAATTCTCTACTCCTCCCGGGCAGGAGG +
Preference number: 6 (lower is better)
Translates to: LNHQELPHCPLR*LQNSLLLPGRR
Trigger: CCTCCTGCCCGGGAGGAGTAGAGAATTCTGGAGCCACCTTAGTGGGCAATGGGGGAGCTCCTGATGGTTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497229.1
CDS CAA 90 bp CTCTCTGGGAAGAGTGGCTGCACCAACGTCCCAAACACGGCCAGGTaGATAAGCGTCTGGGGCGGGAGGGACTTCACAGCCAAAACAATG +
Preference number: 6 (lower is better)
Translates to: LSGKSGCTNVPNTAR*ISVWGGRDFTAKTM
Trigger: CATTGTTTTGGCTGTGAAGTCCCTCCCGCCCCAGACGCTTATCAACCTGGCCGTGTTTGGGACGTTGGTGCAGCCACTCTTCCCAGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273794.5
ENST00000426955.6
ENST00000461141.5
ENST00000474580.1
CDS GCA 72 bp TCATCACTGCAAGGCCGGCTCTCTGGGAAGAGTGGCTaGACCAACGTCCCAAACACGGCCAGGTTGATAAGC +
Preference number: 6 (lower is better)
Translates to: SSLQGRLSGKSG*TNVPNTARLIS
Trigger: GCTTATCAACCTGGCCGTGTTTGGGACGTTGGTGCAGCCACTCTTCCCAGAGAGCCGGCCTTGCAGTGATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273794.5
ENST00000426955.6
ENST00000461141.5
ENST00000474580.1
CDS CCA 72 bp AGCATCATCACTGCAAGGCCGGCTCTCTGGGAAGAGTaGCTGCACCAACGTCCCAAACACGGCCAGGTTGAT +
Preference number: 6 (lower is better)
Translates to: SIITARPALWEE*LHQRPKHGQVD
Trigger: ATCAACCTGGCCGTGTTTGGGACGTTGGTGCAGCCACTCTTCCCAGAGAGCCGGCCTTGCAGTGATGATGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273794.5
ENST00000426955.6
ENST00000461141.5
ENST00000474580.1
CDS CCA 72 bp GCCTCTTTCCATTCAACCCTTGGCCACCATCCCTTGTaGATAGACATCTCCCTGTGGCCTGGGACCCCACTC +
Preference number: 6 (lower is better)
Translates to: ASFHSTLGHHPL*IDISLWPGTPL
Trigger: GAGTGGGGTCCCAGGCCACAGGGAGATGTCTATCCACAAGGGATGGTGGCCAAGGGTTGAATGGAAAGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497229.1
CDS CAA 72 bp CCTGCCTCTTTCCATTCAACCCTTGGCCACCATCCCTaGTGGATAGACATCTCCCTGTGGCCTGGGACCCCA +
Preference number: 6 (lower is better)
Translates to: PASFHSTLGHHP*WIDISLWPGTP
Trigger: TGGGGTCCCAGGCCACAGGGAGATGTCTATCCACAAGGGATGGTGGCCAAGGGTTGAATGGAAAGAGGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497229.1
CDS TCA 72 bp TGGGTGAGCACATACTGCTCCCGAATGTACGAGGACTaGAAGATGCGGCGCCATATGGCTGTGTCAGAGGGG +
Preference number: 6 (lower is better)
Translates to: WVSTYCSRMYED*KMRRHMAVSEG
Trigger: CCCCTCTGACACAGCCATATGGCGCCGCATCTTTCAGTCCTCGTACATTCGGGAGCAGTATGTGCTCACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273794.5
ENST00000426955.6
ENST00000461141.5
CDS TCA 72 bp ATATGGCTGTGTCAGAGGGGTTGGGTCCAGGATCCGTaGCTGGGTCTGTCAGAGCATCAGTACTCTGCTCCG +
Preference number: 6 (lower is better)
Translates to: IWLCQRGWVQDP*LGLSEHQYSAP
Trigger: CGGAGCAGAGTACTGATGCTCTGACAGACCCAGTCACGGATCCTGGACCCAACCCCTCTGACACAGCCATAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426955.6
ENST00000461141.5
CDS GCA 72 bp GCACATACTGCTCCCGAATGTACGAGGACTGAAAGATaGGGCGCCATATGGCTGTGTCAGAGGGGTTGGGTC +
Preference number: 6 (lower is better)
Translates to: AHTAPECTRTER*GAIWLCQRGWV
Trigger: GACCCAACCCCTCTGACACAGCCATATGGCGCCGCATCTTTCAGTCCTCGTACATTCGGGAGCAGTATGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273794.5
ENST00000426955.6
ENST00000461141.5
CDS CCA 72 bp ACCAACGTCCCAAACACGGCCAGGTTGATAAGCGTCTaGGGCGGGAGGGACTTCACAGCCAAAACAATGGCA +
Preference number: 6 (lower is better)
Translates to: TNVPNTARLISV*GGRDFTAKTMA
Trigger: TGCCATTGTTTTGGCTGTGAAGTCCCTCCCGCCCCAGACGCTTATCAACCTGGCCGTGTTTGGGACGTTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273794.5
ENST00000426955.6
ENST00000461141.5
ENST00000474580.1
CDS CCA 72 bp GAGAGGACACAATTCTGTCAAGGAAGGCCCTGCCTCTaGACCCCAAGTGCCCAGTTTCACTGTCCAGGAGGA +
Preference number: 6 (lower is better)
Translates to: ERTQFCQGRPCL*TPSAQFHCPGG
Trigger: TCCTCCTGGACAGTGAAACTGGGCACTTGGGGTCCAGAGGCAGGGCCTTCCTTGACAGAATTGTGTCCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461141.5
CDS TCA 72 bp ATATGGCTGTGTCAGAGGGGTTGGGTCCAGGATCCGTaGCTGGGTCTGTCAGAGCATCAGTACCTGTCTGCT +
Preference number: 6 (lower is better)
Translates to: IWLCQRGWVQDP*LGLSEHQYLSA
Trigger: AGCAGACAGGTACTGATGCTCTGACAGACCCAGTCACGGATCCTGGACCCAACCCCTCTGACACAGCCATAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273794.5
CDS CAA 90 bp TCTGCTCATAAATTTCCTGCTCCTGAACCATCAGGAGCTCCCCCATaGCCCACTAAGGTGGCTCCAGAATTCTCTACTCCTCCCGGGCAG +
Preference number: 6 (lower is better)
Translates to: SAHKFPAPEPSGAPP*PTKVAPEFSTPPGQ
Trigger: CTGCCCGGGAGGAGTAGAGAATTCTGGAGCCACCTTAGTGGGCAATGGGGGAGCTCCTGATGGTTCAGGAGCAGGAAATTTATGAGCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497229.1
CDS GCA 72 bp AATTTCCTGCTCCTGAACCATCAGGAGCTCCCCCATTaGCCACTAAGGTGGCTCCAGAATTCTCTACTCCTC +
Preference number: 6 (lower is better)
Translates to: NFLLLNHQELPH*PLRWLQNSLLL
Trigger: GAGGAGTAGAGAATTCTGGAGCCACCTTAGTGGGCAATGGGGGAGCTCCTGATGGTTCAGGAGCAGGAAATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497229.1
CDS TCA 72 bp ATCGGCCCTCCAATGACAATACTCATCTGTCCTCTGTaGTGGTTGGTGGCAGCTGTGGAGAGATCTTACCGA +
Preference number: 6 (lower is better)
Translates to: IGPPMTILICPL*WLVAAVERSYR
Trigger: TCGGTAAGATCTCTCCACAGCTGCCACCAACCATCACAGAGGACAGATGAGTATTGTCATTGGAGGGCCGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497229.1
CDS TCA 72 bp AGACACACCCCAGAGAGATTCACATCGGCCCTCCAATaGCAATACTCATCTGTCCTCTGTGATGGTTGGTGG +
Preference number: 6 (lower is better)
Translates to: RHTPERFTSALQ*QYSSVLCDGWW
Trigger: CCACCAACCATCACAGAGGACAGATGAGTATTGTCATTGGAGGGCCGATGTGAATCTCTCTGGGGTGTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497229.1
CDS TCA 72 bp TGTCTTCTGTTTATATCAGACCTAGCCTCCATCCTCTaGGACACACCCCAGAGAGATTCACATCGGCCCTCC +
Preference number: 6 (lower is better)
Translates to: CLLFISDLASIL*DTPQRDSHRPS
Trigger: GGAGGGCCGATGTGAATCTCTCTGGGGTGTGTCTCAGAGGATGGAGGCTAGGTCTGATATAAACAGAAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497229.1
CDS CAA 72 bp AAATTTCCTGCTCCTGAACCATCAGGAGCTCCCCCATaGCCCACTAAGGTGGCTCCAGAATTCTCTACTCCT +
Preference number: 6 (lower is better)
Translates to: KFPAPEPSGAPP*PTKVAPEFSTP
Trigger: AGGAGTAGAGAATTCTGGAGCCACCTTAGTGGGCAATGGGGGAGCTCCTGATGGTTCAGGAGCAGGAAATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497229.1