RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for VWA5A (Homo sapiens)

Ensembl gene IDs: ENSG00000110002

Ensembl transcript IDs: ENST00000361352.9, ENST00000392744.4, ENST00000392748.5, ENST00000449321.5, ENST00000456829.7, ENST00000533623.1

Found 538 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGGAATAGGTTCTGGGACCACTGTCACTTTTCTGAGGGCATATGTTaGGAAAAGAAAGATCATATCCAAAGTGAACCTGGAGCAGAGAAG +
Preference number: 1 (lower is better)
Translates to: GNRFWDHCHFSEGIC*EKKDHIQSEPGAEK
Trigger: CTTCTCTGCTCCAGGTTCACTTTGGATATGATCTTTCTTTTCCCAACATATGCCCTCAGAAAAGTGACAGTGGTCCCAGAACCTATTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
3UTR TCA 90 bp TGTTCCGCAGATCACATTCAGCATAAACAAACTTGGAAGAAAGACTaGGAGATTAGAGTCCACTATGCAAGTCACACAAGTCTTCCTAAT +
Preference number: 1 (lower is better)
Translates to: CSADHIQHKQTWKKD*EIRVHYASHTSLPN
Trigger: ATTAGGAAGACTTGTGTGACTTGCATAGTGGACTCTAATCTCTCAGTCTTTCTTCCAAGTTTGTTTATGCTGAATGTGATCTGCGGAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456829.7
3UTR CCA 90 bp GAGGGTGAAATCATTTGCCCATCATCACATAACTATTTAAGGGTATaGTCAGGATTCTACAGTGGTATTCTTATTAGTATCCTTTACTTG +
Preference number: 1 (lower is better)
Translates to: EGEIICPSSHNYLRV*SGFYSGILISILYL
Trigger: CAAGTAAAGGATACTAATAAGAATACCACTGTAGAATCCTGACCATACCCTTAAATAGTTATGTGATGATGGGCAAATGATTTCACCCTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456829.7
3UTR-3UTR CCA 90 bp TCAGGAAGGTCCCCAACAGTGTCACCTCTCACAGTGGACCCCTGCAGTCTCTGTAAAGGGAATAGGTTCTaGGACCACTGTCACTTTTCT +
Preference number: 2 (lower is better)
Translates to: SGRSPTVSPLTVDPCSLCKGNRF*DHCHFS
Trigger: AGAAAAGTGACAGTGGTCCCAGAACCTATTCCCTTT...ACAGAGACTGCAGGGGTCCACTGTGAGAGGTGACACTGTTGGGGACCTTCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
3UTR-3UTR CCA 90 bp AGGGTATATGAGACACAAGGGTCAGGAACGATTACGGGGAGCTCCTTTCTTCCTTTCATGTTGTTTCCCTaGAAACCCTGGGAGGAACAT +
Preference number: 2 (lower is better)
Translates to: RVYETQGSGTITGSSFLPFMLFP*KPWEEH
Trigger: ATGTTCCTCCCAGGGTTTCCAGGGAAACAACATGAA...AGGAAGAAAGGAGCTCCCCGTAATCGTTCCTGACCCTTGTGTCTCATATACCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
3UTR-3UTR CCA 90 bp GACAGCATATCAAATAGGGTCATTTCCACCAGGATAGGGTATATGAGACACAAGTGTCACCTCTCACAGTaGACCCCTGCAGTCTCTGTC +
Preference number: 2 (lower is better)
Translates to: DSISNRVISTRIGYMRHKCHLSQ*TPAVSV
Trigger: GACAGAGACTGCAGGGGTCCACTGTGAGAGGTGACA...CTTGTGTCTCATATACCCTATCCTGGTGGAAATGACCCTATTTGATATGCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
3UTR CAA 90 bp ACAGTGGACCCCTGCAGTCTCTGTCTTTGTGATCTTGACATTACATaGATCCAGATGTTGGCTTTCAACTTCCCTCTAACTCCTCCTACG +
Preference number: 2 (lower is better)
Translates to: TVDPCSLCLCDLDIT*IQMLAFNFPLTPPT
Trigger: CGTAGGAGGAGTTAGAGGGAAGTTGAAAGCCAACATCTGGATCAATGTAATGTCAAGATCACAAAGACAGAGACTGCAGGGGTCCACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
3UTR-3UTR CCA 90 bp CAGGCAGTGGAAGAAAAGACATGTAGGTTGTACAGGCTAGCAAAGCCCAAGAAGTTCATGTTGTTTCCCTaGAAACCCTGGGAGGAACAT +
Preference number: 2 (lower is better)
Translates to: QAVEEKTCRLYRLAKPKKFMLFP*KPWEEH
Trigger: ATGTTCCTCCCAGGGTTTCCAGGGAAACAACATGAA...CTTCTTGGGCTTTGCTAGCCTGTACAACCTACATGTCTTTTCTTCCACTGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
3UTR CAA 90 bp AGTTCAACCCAAGTCTTTCAGGCAGTGGAAGAAAAGACATGTAGGTaGTACAGGCTAGCAAAGCCCAAGAAGAATGAATCAGGAAGGTCC +
Preference number: 2 (lower is better)
Translates to: SSTQVFQAVEEKTCR*YRLAKPKKNESGRS
Trigger: GGACCTTCCTGATTCATTCTTCTTGGGCTTTGCTAGCCTGTACAACCTACATGTCTTTTCTTCCACTGCCTGAAAGACTTGGGTTGAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
3UTR-3UTR CCA 90 bp CAGGCAGTGGAAGAAAAGACATGTAGGTTGTACAGGCTAGCAAAGCCCAAGAAGAGCAGAGAAGCGAAGTaGAGTAAGCATCCTTTACTT +
Preference number: 2 (lower is better)
Translates to: QAVEEKTCRLYRLAKPKKSREAK*SKHPLL
Trigger: AAGTAAAGGATGCTTACTCCACTTCGCTTCTCTGCT...CTTCTTGGGCTTTGCTAGCCTGTACAACCTACATGTCTTTTCTTCCACTGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
3UTR-3UTR CCA 90 bp GGTCAGGATACCATGGGAACAGTGGAGGCATCAGAAAAGCTGGAACAGAAAACAAGCAGAGAAGCGAAGTaGAGTAAGCATCCTTTACTT +
Preference number: 2 (lower is better)
Translates to: GQDTMGTVEASEKLEQKTSREAK*SKHPLL
Trigger: AAGTAAAGGATGCTTACTCCACTTCGCTTCTCTGCT...TGTTTTCTGTTCCAGCTTTTCTGATGCCTCCACTGTTCCCATGGTATCCTGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456829.7
3UTR-3UTR CCA 90 bp GCAGTGGAAGAAAAGACATGTAGGTTGTACAGGCTAGCAAAGCCCAAGAAGAATTTTCCCTGGAAACCCTaGGAGGAACATTACTGCCTA +
Preference number: 2 (lower is better)
Translates to: AVEEKTCRLYRLAKPKKNFPWKP*EEHYCL
Trigger: TAGGCAGTAATGTTCCTCCCAGGGTTTCCAGGGAAA...ATTCTTCTTGGGCTTTGCTAGCCTGTACAACCTACATGTCTTTTCTTCCACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
3UTR CAA 90 bp TGCAGTCTCTGTCTTTGTGATCTTGACATTACATTGATCCAGATGTaGGCTTTCAACTTCCCTCTAACTCCTCCTACGCAAGCTTACCAG +
Preference number: 2 (lower is better)
Translates to: CSLCLCDLDITLIQM*AFNFPLTPPTQAYQ
Trigger: CTGGTAAGCTTGCGTAGGAGGAGTTAGAGGGAAGTTGAAAGCCAACATCTGGATCAATGTAATGTCAAGATCACAAAGACAGAGACTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
3UTR-3UTR TCA 90 bp TCTCTCTCCAACAGTTATAGTTCAACCCAAGTCTTTCAGGCAGTGGAAGAAAAGAAAGCCCAAGAAGAATaGATCAGGAAGGTCCCCAAC +
Preference number: 2 (lower is better)
Translates to: SLSNSYSSTQVFQAVEEKKAQEE*IRKVPN
Trigger: GTTGGGGACCTTCCTGATTCATTCTTCTTGGGCTTT...CTTTTCTTCCACTGCCTGAAAGACTTGGGTTGAACTATAACTGTTGGAGAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
3UTR-3UTR CCA 90 bp GAGTCCACTATGCAAGTCACACAAGTCTTCCTAATACCAGGTAACTCAACAACTATACCATGGGAACAGTaGAGGCATCAGAAAAGCTGG +
Preference number: 2 (lower is better)
Translates to: ESTMQVTQVFLIPGNSTTIPWEQ*RHQKSW
Trigger: CCAGCTTTTCTGATGCCTCCACTGTTCCCATGGTAT...AGTTGTTGAGTTACCTGGTATTAGGAAGACTTGTGTGACTTGCATAGTGGACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456829.7
3UTR-3UTR TCA 90 bp GACAGCATATCAAATAGGGTCATTTCCACCAGGATAGGGTATATGAGACACAAGCCACTGTCACTTTTCTaGGGGCATATGTTGGGAAAA +
Preference number: 2 (lower is better)
Translates to: DSISNRVISTRIGYMRHKPLSLF*GHMLGK
Trigger: TTTTCCCAACATATGCCCTCAGAAAAGTGACAGTGG...CTTGTGTCTCATATACCCTATCCTGGTGGAAATGACCCTATTTGATATGCTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
3UTR-3UTR TCA 90 bp CAGGCAGTGGAAGAAAAGACATGTAGGTTGTACAGGCTAGCAAAGCCCAAGAAGATCTTGACATTACATTaGTCCAGATGTTGGCTTTCA +
Preference number: 2 (lower is better)
Translates to: QAVEEKTCRLYRLAKPKKILTLH*SRCWLS
Trigger: TGAAAGCCAACATCTGGATCAATGTAATGTCAAGAT...CTTCTTGGGCTTTGCTAGCCTGTACAACCTACATGTCTTTTCTTCCACTGCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
3UTR-3UTR TCA 90 bp CAAGTTATTTTAAGGGACAGCATATCAAATAGGGTCATTTCCACCAGGATAGGGCCACTGTCACTTTTCTaGGGGCATATGTTGGGAAAA +
Preference number: 2 (lower is better)
Translates to: QVILRDSISNRVISTRIGPLSLF*GHMLGK
Trigger: TTTTCCCAACATATGCCCTCAGAAAAGTGACAGTGG...CCCTATCCTGGTGGAAATGACCCTATTTGATATGCTGTCCCTTAAAATAACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
3UTR-3UTR CCA 90 bp AGTATCCTTTACTTGCTTCATATAAAAGAAGTCAGCCTACAACAGAAGATAGAGAAAGGGAATAGGTTCTaGGACCACTGTCACTTTTCT +
Preference number: 2 (lower is better)
Translates to: SILYLLHIKEVSLQQKIEKGNRF*DHCHFS
Trigger: AGAAAAGTGACAGTGGTCCCAGAACCTATTCCCTTT...CTCTATCTTCTGTTGTAGGCTGACTTCTTTTATATGAAGCAAGTAAAGGATACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456829.7
3UTR CCA 72 bp AATCAGGAAGGTCCCCAACAGTGTCACCTCTCACAGTaGACCCCTGCAGTCTCTGTCTTTGTGATCTTGACA +
Preference number: 3 (lower is better)
Translates to: NQEGPQQCHLSQ*TPAVSVFVILT
Trigger: TGTCAAGATCACAAAGACAGAGACTGCAGGGGTCCACTGTGAGAGGTGACACTGTTGGGGACCTTCCTGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
3UTR-3UTR CAA 90 bp GGTCAGGATACCATGGGAACAGTGGAGGCATCAGAAAAGCTGGAACAGAAAACACTGCCTATGAATGTTTaGAACTCCCTCAAGAAAGGG +
Preference number: 3 (lower is better)
Translates to: GQDTMGTVEASEKLEQKTLPMNV*NSLKKG
Trigger: CCCTTTCTTGAGGGAGTTCAAAACATTCATAGGCAG...TGTTTTCTGTTCCAGCTTTTCTGATGCCTCCACTGTTCCCATGGTATCCTGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456829.7
3UTR-3UTR CAA 90 bp TATGAGACACAAGGGTCAGGAACGATTACGGGGAGCTCCTTTCTTCCTAATGCGACATTGATCCAGATGTaGGCTTTCAACTTCCCTCTA +
Preference number: 3 (lower is better)
Translates to: YETQGSGTITGSSFLPNATLIQM*AFNFPL
Trigger: TAGAGGGAAGTTGAAAGCCAACATCTGGATCAATGT...CGCATTAGGAAGAAAGGAGCTCCCCGTAATCGTTCCTGACCCTTGTGTCTCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
3UTR-3UTR CAA 90 bp ATTACATTGATCCAGATGTTGGCTTTCAACTTCCCTCTAACTCCTCCTACGCAACTGCCTATGAATGTTTaGAACTCCCTCAAGAAAGGG +
Preference number: 3 (lower is better)
Translates to: ITLIQMLAFNFPLTPPTQLPMNV*NSLKKG
Trigger: CCCTTTCTTGAGGGAGTTCAAAACATTCATAGGCAG...TTGCGTAGGAGGAGTTAGAGGGAAGTTGAAAGCCAACATCTGGATCAATGTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
3UTR TCA 72 bp AACTTAAAGAAACTCAGGCCTAGTCCACCCACTTTCTaGGTGAAAAGTCACCGATGTTCCTCTAGGAATTCT +
Preference number: 3 (lower is better)
Translates to: NLKKLRPSPPTF*VKSHRCSSRNS
Trigger: AGAATTCCTAGAGGAACATCGGTGACTTTTCACTCAGAAAGTGGGTGGACTAGGCCTGAGTTTCTTTAAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456829.7
3UTR CCA 72 bp TTCTGGGACCACTGTCACTTTTCTGAGGGCATATGTTaGGAAAAGAAAGATCATATCCAAAGTGAACCTGGA +
Preference number: 3 (lower is better)
Translates to: FWDHCHFSEGIC*EKKDHIQSEPG
Trigger: TCCAGGTTCACTTTGGATATGATCTTTCTTTTCCCAACATATGCCCTCAGAAAAGTGACAGTGGTCCCAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
3UTR CCA 72 bp ATCATTTGCCCATCATCACATAACTATTTAAGGGTATaGTCAGGATTCTACAGTGGTATTCTTATTAGTATC +
Preference number: 3 (lower is better)
Translates to: IICPSSHNYLRV*SGFYSGILISI
Trigger: GATACTAATAAGAATACCACTGTAGAATCCTGACCATACCCTTAAATAGTTATGTGATGATGGGCAAATGAT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456829.7
CDS-3UTR GCA 90 bp TCAGGAAGGTCCCCAACAGTGTCACCTCTCACAGTGGACCCCTGCAGTCTCTGTCCCCCTAGGTCGGCCTaGATAAGCTTCACTCTCCCC +
Preference number: 4 (lower is better)
Translates to: SGRSPTVSPLTVDPCSLCPPRSA*ISFTLP
Trigger: GGGGAGAGTGAAGCTTATGCAGGCCGACCTAGGGGG...ACAGAGACTGCAGGGGTCCACTGTGAGAGGTGACACTGTTGGGGACCTTCCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CCA 90 bp TGTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACAGGGTGGGAGGGGAGCTaGGTGGCACCACCGGCCACA +
Preference number: 4 (lower is better)
Translates to: CSTRVCVSLLSTNHPEITGWEGS*VAPPAT
Trigger: TGTGGCCGGTGGTGCCACCCAGCTCCCCTCCCACCC...TGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392744.4
CDS-3UTR TCA 90 bp TCAGGAAGGTCCCCAACAGTGTCACCTCTCACAGTGGACCCCTGCAGTCTCTGTAGCGTTTCAGAGTCCTaGGAGCCTTGGACTGCATCC +
Preference number: 4 (lower is better)
Translates to: SGRSPTVSPLTVDPCSLCSVSES*EPWTAS
Trigger: GGATGCAGTCCAAGGCTCTCAGGACTCTGAAACGCT...ACAGAGACTGCAGGGGTCCACTGTGAGAGGTGACACTGTTGGGGACCTTCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR GCA 90 bp TCAGGAAGGTCCCCAACAGTGTCACCTCTCACAGTGGACCCCTGCAGTCTCTGTATACTTCAGGGTGACTaGCGCCTTCGACCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: SGRSPTVSPLTVDPCSLCILQGD*RLRPRL
Trigger: CAACCTGGGTCGAAGGCGGCAGTCACCCTGAAGTAT...ACAGAGACTGCAGGGGTCCACTGTGAGAGGTGACACTGTTGGGGACCTTCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CCA 90 bp GTCCTCTTGAAGGAAGGTCAACACCGGCATCATGTAGCACTAGAGTCTGTGTGTGGCACTGGCTCCCGGTaGAGGGTGAGTAGGCCACAG +
Preference number: 4 (lower is better)
Translates to: VLLKEGQHRHHVALESVCGTGSR*RVSRPQ
Trigger: CTGTGGCCTACTCACCCTCCACCGGGAGCCAGTGCC...ACACACAGACTCTAGTGCTACATGATGCCGGTGTTGACCTTCCTTCAAGAGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361352.9
ENST00000449321.5
CDS-3UTR CCA 90 bp CAACAGTGTCACCTCTCACAGTGGACCCCTGCAGTCTCTGTCTTTGTGATCTTGACTCTTCAGCGGCACTaGCTCCCGGTGGAGGGTGAG +
Preference number: 4 (lower is better)
Translates to: QQCHLSQWTPAVSVFVILTLQRH*LPVEGE
Trigger: CTCACCCTCCACCGGGAGCCAGTGCCGCTGAAGAGT...CAAGATCACAAAGACAGAGACTGCAGGGGTCCACTGTGAGAGGTGACACTGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR GCA 90 bp TCAGGAAGGTCCCCAACAGTGTCACCTCTCACAGTGGACCCCTGCAGTCTCTGTTCCAGAGGCAGCTCCTaGACATACTTCAGGGTGACT +
Preference number: 4 (lower is better)
Translates to: SGRSPTVSPLTVDPCSLCSRGSS*TYFRVT
Trigger: AGTCACCCTGAAGTATGTGCAGGAGCTGCCTCTGGA...ACAGAGACTGCAGGGGTCCACTGTGAGAGGTGACACTGTTGGGGACCTTCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CCA 90 bp CATGTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCAGGCACTGGCTCCCGGTaGAGGGTGAGTAGGCCACAG +
Preference number: 4 (lower is better)
Translates to: HVALESVCHYSAPITRKSGTGSR*RVSRPQ
Trigger: CTGTGGCCTACTCACCCTCCACCGGGAGCCAGTGCC...TGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTACATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR CCA 90 bp TCATTTGGTCCTCTTGAAGGAAGGTCAACACCGGCATCATGTAGCACTAGAGTCGGCACTGGCTCCCGGTaGAGGGTGAGTAGGCCACAG +
Preference number: 4 (lower is better)
Translates to: SFGPLEGRSTPASCSTRVGTGSR*RVSRPQ
Trigger: CTGTGGCCTACTCACCCTCCACCGGGAGCCAGTGCC...GACTCTAGTGCTACATGATGCCGGTGTTGACCTTCCTTCAAGAGGACCAAATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361352.9
ENST00000449321.5
CDS-3UTR TCA 90 bp TTGAAGGAAGGTCAACACCGGCATCATGTAGCACTAGAGTCTGTGTGTCACTACGCTCCCGGTGGAGGGTaGGTAGGCCACAGAAGTGCA +
Preference number: 4 (lower is better)
Translates to: LKEGQHRHHVALESVCHYAPGGG*VGHRSA
Trigger: TGCACTTCTGTGGCCTACTCACCCTCCACCGGGAGC...GTAGTGACACACAGACTCTAGTGCTACATGATGCCGGTGTTGACCTTCCTTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361352.9
ENST00000449321.5
CDS-3UTR TCA 90 bp TGTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACAGGCCTGTGGCAGGGGTaGAGTGGAGAACTCGGAACC +
Preference number: 4 (lower is better)
Translates to: CSTRVCVSLLSTNHPEITGLWQG*SGELGT
Trigger: GGTTCCGAGTTCTCCACTTCACCCCTGCCACAGGCC...TGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392744.4
CDS-3UTR GCA 90 bp GCATCATGTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAACCCCCTAGGTCGGCCTaGATAAGCTTCACTCTCCCC +
Preference number: 4 (lower is better)
Translates to: ASCSTRVCVSLLSTNHPEPPRSA*ISFTLP
Trigger: GGGGAGAGTGAAGCTTATGCAGGCCGACCTAGGGGG...TTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTACATGATGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361352.9
ENST00000449321.5
CDS-3UTR GCA 90 bp TCATGTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCCCTACCTTCCTCTCCTaGAGCCCGGAGCGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: SCSTRVCVSLLSTNHPEIPTFLS*SPERSE
Trigger: CTCAGAGCGCTCCGGGCTGCAGGAGAGGAAGGTAGG...GATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTACATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392744.4
CDS-3UTR GCA 90 bp AGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACATTTCTGGGCTTCCTCTCCTaGAGCCCGGAGCGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: STRVCVSLLSTNHPEITFLGFLS*SPERSE
Trigger: CTCAGAGCGCTCCGGGCTGCAGGAGAGGAAGCCCAG...AAATGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449321.5
CDS-3UTR GCA 90 bp ACAGTGGACCCCTGCAGTCTCTGTCTTTGTGATCTTGACATTACATTGATCCAGCTGGGCTTCCTCTCCTaGAGCCCGGAGCGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: TVDPCSLCLCDLDITLIQLGFLS*SPERSE
Trigger: CTCAGAGCGCTCCGGGCTGCAGGAGAGGAAGCCCAG...CTGGATCAATGTAATGTCAAGATCACAAAGACAGAGACTGCAGGGGTCCACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456829.7
CDS-3UTR CCA 90 bp TTGAAGGAAGGTCAACACCGGCATCATGTAGCACTAGAGTCTGTGTGTCACTACACTCTTCAGCGGCACTaGCTCCCGGTGGAGGGTGAG +
Preference number: 4 (lower is better)
Translates to: LKEGQHRHHVALESVCHYTLQRH*LPVEGE
Trigger: CTCACCCTCCACCGGGAGCCAGTGCCGCTGAAGAGT...GTAGTGACACACAGACTCTAGTGCTACATGATGCCGGTGTTGACCTTCCTTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361352.9
ENST00000449321.5
CDS-3UTR CCA 90 bp TCAGGAAGGTCCCCAACAGTGTCACCTCTCACAGTGGACCCCTGCAGTCTCTGTAAGGGGCAGTTGGATTaGACCTTCTCAATGCCATGC +
Preference number: 4 (lower is better)
Translates to: SGRSPTVSPLTVDPCSLCKGQLD*TFSMPC
Trigger: GCATGGCATTGAGAAGGTCCAATCCAACTGCCCCTT...ACAGAGACTGCAGGGGTCCACTGTGAGAGGTGACACTGTTGGGGACCTTCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CCA 90 bp TCATGTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCTTCCAGAGCAGGGGTTaGATCCAGGCCCTGCACCGG +
Preference number: 4 (lower is better)
Translates to: SCSTRVCVSLLSTNHPEIFQSRG*IQALHR
Trigger: CCGGTGCAGGGCCTGGATCCAACCCCTGCTCTGGAA...GATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTACATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392744.4
CDS-3UTR TCA 90 bp CATGTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCAGCACATACTTCAGGGTaGCTGCCGCCTTCGACCCAG +
Preference number: 4 (lower is better)
Translates to: HVALESVCHYSAPITRKSAHTSG*LPPSTQ
Trigger: CTGGGTCGAAGGCGGCAGTCACCCTGAAGTATGTGC...TGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTACATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR TCA 90 bp CATCATGTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAAGCACATACTTCAGGGTaGCTGCCGCCTTCGACCCAG +
Preference number: 4 (lower is better)
Translates to: HHVALESVCHYSAPITRKAHTSG*LPPSTQ
Trigger: CTGGGTCGAAGGCGGCAGTCACCCTGAAGTATGTGC...TTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTACATGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR TCA 90 bp TGTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACATGGTGGCGACCATGCTaGGTGTGTAGGGCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: CSTRVCVSLLSTNHPEITWWRPC*VCRAGP
Trigger: AGGACCTGCCCTACACACTCAGCATGGTCGCCACCA...TGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR TCA 90 bp CATGTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCATGGTGGCGACCATGCTaGGTGTGTAGGGCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: HVALESVCHYSAPITRKSWWRPC*VCRAGP
Trigger: AGGACCTGCCCTACACACTCAGCATGGTCGCCACCA...TGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTACATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR TCA 90 bp GGTCAGGATACCATGGGAACAGTGGAGGCATCAGAAAAGCTGGAACAGAAAACAAGTTCCCCTCTGGGCTaGGATGCAGAAGGAGGACGG +
Preference number: 4 (lower is better)
Translates to: GQDTMGTVEASEKLEQKTSSPLG*DAEGGR
Trigger: CCGTCCTCCTTCTGCATCTCAGCCCAGAGGGGAACT...TGTTTTCTGTTCCAGCTTTTCTGATGCCTCCACTGTTCCCATGGTATCCTGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000456829.7
CDS-3UTR TCA 90 bp TCAGGAAGGTCCCCAACAGTGTCACCTCTCACAGTGGACCCCTGCAGTCTCTGTAGTCCACCCACTTTCTaGGTGAAAAGTCACCGATGT +
Preference number: 4 (lower is better)
Translates to: SGRSPTVSPLTVDPCSLCSPPTF*VKSHRC
Trigger: ACATCGGTGACTTTTCACTCAGAAAGTGGGTGGACT...ACAGAGACTGCAGGGGTCCACTGTGAGAGGTGACACTGTTGGGGACCTTCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000456829.7
CDS-3UTR GCA 90 bp GAAGGAAGGTCAACACCGGCATCATGTAGCACTAGAGTCTGTGTGTCACTACTCCTACTCATGGGGCTCTaGATACTTCCCGAGCGGTCC +
Preference number: 4 (lower is better)
Translates to: EGRSTPASCSTRVCVSLLLLMGL*ILPERS
Trigger: GGACCGCTCGGGAAGTATGCAGAGCCCCATGAGTAG...GAGTAGTGACACACAGACTCTAGTGCTACATGATGCCGGTGTTGACCTTCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361352.9
ENST00000449321.5
CDS-3UTR GCA 90 bp ACACCGGCATCATGTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCTACTCATGGGGCTCTaGATACTTCCCGAGCGGTCC +
Preference number: 4 (lower is better)
Translates to: TPASCSTRVCVSLLSTNHLLMGL*ILPERS
Trigger: GGACCGCTCGGGAAGTATGCAGAGCCCCATGAGTAG...GTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTACATGATGCCGGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361352.9
ENST00000449321.5
CDS-3UTR GCA 90 bp CAGGCAGTGGAAGAAAAGACATGTAGGTTGTACAGGCTAGCAAAGCCCAAGAAGCCCCCTAGGTCGGCCTaGATAAGCTTCACTCTCCCC +
Preference number: 4 (lower is better)
Translates to: QAVEEKTCRLYRLAKPKKPPRSA*ISFTLP
Trigger: GGGGAGAGTGAAGCTTATGCAGGCCGACCTAGGGGG...CTTCTTGGGCTTTGCTAGCCTGTACAACCTACATGTCTTTTCTTCCACTGCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR GCA 90 bp GCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACATTTTGTTGGATCCAGGCCCTaGACCGGTAGCTTGGTCCCC +
Preference number: 4 (lower is better)
Translates to: ALESVCHYSAPITRKSHFVGSRP*TGSLVP
Trigger: GGGGACCAAGCTACCGGTGCAGGGCCTGGATCCAAC...AAAATGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392744.4
CDS-3UTR CCA 90 bp GCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACATTTTACTCTTCAGCGGCACTaGCTCCCGGTGGAGGGTGAG +
Preference number: 4 (lower is better)
Translates to: ALESVCHYSAPITRKSHFTLQRH*LPVEGE
Trigger: CTCACCCTCCACCGGGAGCCAGTGCCGCTGAAGAGT...AAAATGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR CCA 90 bp TCAGGAAGGTCCCCAACAGTGTCACCTCTCACAGTGGACCCCTGCAGTCTCTGTTCCCATCAAATGACCTaGCTTCATGTTAGGCATCCC +
Preference number: 4 (lower is better)
Translates to: SGRSPTVSPLTVDPCSLCSHQMT*LHVRHP
Trigger: GGGATGCCTAACATGAAGCCAGGTCATTTGATGGGA...ACAGAGACTGCAGGGGTCCACTGTGAGAGGTGACACTGTTGGGGACCTTCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CCA 90 bp CATGTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACCTGCACCGGTAGCTTaGTCCCCTACCTTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: HVALESVCHYSAPITRKSPAPVA*SPTFLS
Trigger: GGAGAGGAAGGTAGGGGACCAAGCTACCGGTGCAGG...TGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392744.4
CDS-3UTR CCA 90 bp AATGAATCAGGAAGGTCCCCAACAGTGTCACCTCTCACAGTGGACCCCTGCAGTCGCAGACCTCTGACCTaGGCAAGTTCTCTGGTAGAA +
Preference number: 4 (lower is better)
Translates to: NESGRSPTVSPLTVDPCSRRPLT*ASSLVE
Trigger: TTCTACCAGAGAACTTGCCCAGGTCAGAGGTCTGCG...ACTGCAGGGGTCCACTGTGAGAGGTGACACTGTTGGGGACCTTCCTGATTCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456829.7
CDS-3UTR CCA 90 bp TATGAGACACAAGGGTCAGGAACGATTACGGGGAGCTCCTTTCTTCCTAATGCGTGTTGTCTCTGCTGCTaGCATCCTCCCGGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: YETQGSGTITGSSFLPNACCLCC*HPPGQL
Trigger: CAGCTGACCGGGAGGATGCCAGCAGCAGAGACAACA...CGCATTAGGAAGAAAGGAGCTCCCCGTAATCGTTCCTGACCCTTGTGTCTCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CCA 90 bp AGGGTATATGAGACACAAGGGTCAGGAACGATTACGGGGAGCTCCTTTCTTCCTTCACAACCGAAGGCATaGTGGAGCCTGCATGGGCAC +
Preference number: 4 (lower is better)
Translates to: RVYETQGSGTITGSSFLPSQPKA*WSLHGH
Trigger: GTGCCCATGCAGGCTCCACCATGCCTTCGGTTGTGA...AGGAAGAAAGGAGCTCCCCGTAATCGTTCCTGACCCTTGTGTCTCATATACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CCA 90 bp TATGAGACACAAGGGTCAGGAACGATTACGGGGAGCTCCTTTCTTCCTAATGCGTCTGGTAGAACAGGCTaGGCTTCCTCTCCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: YETQGSGTITGSSFLPNASGRTG*ASSPAA
Trigger: GGCTGCAGGAGAGGAAGCCCAGCCTGTTCTACCAGA...CGCATTAGGAAGAAAGGAGCTCCCCGTAATCGTTCCTGACCCTTGTGTCTCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456829.7
CDS-3UTR TCA 90 bp ACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACATTTTCTGCTCCCGGTGGAGGGTaGGTAGGCCACAGAAGTGCA +
Preference number: 4 (lower is better)
Translates to: TRVCVSLLSTNHPEITFSAPGGG*VGHRSA
Trigger: TGCACTTCTGTGGCCTACTCACCCTCCACCGGGAGC...AGAAAATGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR TCA 90 bp GCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACATTTTGCACATACTTCAGGGTaGCTGCCGCCTTCGACCCAG +
Preference number: 4 (lower is better)
Translates to: ALESVCHYSAPITRKSHFAHTSG*LPPSTQ
Trigger: CTGGGTCGAAGGCGGCAGTCACCCTGAAGTATGTGC...AAAATGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR TCA 90 bp GCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACATTTTTGGTGGCGACCATGCTaGGTGTGTAGGGCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: ALESVCHYSAPITRKSHFWWRPC*VCRAGP
Trigger: AGGACCTGCCCTACACACTCAGCATGGTCGCCACCA...AAAATGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR TCA 90 bp ACAGTGGACCCCTGCAGTCTCTGTCTTTGTGATCTTGACATTACATTGATCCAGTGGTGGCGACCATGCTaGGTGTGTAGGGCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: TVDPCSLCLCDLDITLIQWWRPC*VCRAGP
Trigger: AGGACCTGCCCTACACACTCAGCATGGTCGCCACCA...CTGGATCAATGTAATGTCAAGATCACAAAGACAGAGACTGCAGGGGTCCACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR TCA 90 bp GAAGGAAGGTCAACACCGGCATCATGTAGCACTAGAGTCTGTGTGTCACTACTCTTCTACGCAGACCTCTaGCCTGGGCAAGTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: EGRSTPASCSTRVCVSLLFYADL*PGQVLW
Trigger: CCAGAGAACTTGCCCAGGTCAGAGGTCTGCGTAGAA...GAGTAGTGACACACAGACTCTAGTGCTACATGATGCCGGTGTTGACCTTCCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449321.5
CDS-3UTR TCA 90 bp TCAGGAAGGTCCCCAACAGTGTCACCTCTCACAGTGGACCCCTGCAGTCTCTGTCCTGGAGTGTATATTTaGGGCATACTTCTCCTGTTG +
Preference number: 4 (lower is better)
Translates to: SGRSPTVSPLTVDPCSLCPGVYI*GILLLL
Trigger: CAACAGGAGAAGTATGCCTCAAATATACACTCCAGG...ACAGAGACTGCAGGGGTCCACTGTGAGAGGTGACACTGTTGGGGACCTTCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR GCA 90 bp GTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACATCTACTCATGGGGCTCTaGATACTTCCCGAGCGGTCC +
Preference number: 4 (lower is better)
Translates to: VALESVCHYSAPITRKSHLLMGL*ILPERS
Trigger: GGACCGCTCGGGAAGTATGCAGAGCCCCATGAGTAG...ATGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR GCA 90 bp GCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACATTTTCCCCCTAGGTCGGCCTaGATAAGCTTCACTCTCCCC +
Preference number: 4 (lower is better)
Translates to: ALESVCHYSAPITRKSHFPPRSA*ISFTLP
Trigger: GGGGAGAGTGAAGCTTATGCAGGCCGACCTAGGGGG...AAAATGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR GCA 90 bp AGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACATTTCCCCCTAGGTCGGCCTaGATAAGCTTCACTCTCCCC +
Preference number: 4 (lower is better)
Translates to: STRVCVSLLSTNHPEITFPPRSA*ISFTLP
Trigger: GGGGAGAGTGAAGCTTATGCAGGCCGACCTAGGGGG...AAATGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR GCA 90 bp TTGAAGGAAGGTCAACACCGGCATCATGTAGCACTAGAGTCTGTGTGTCACTACGTGCCAAGATTTCAGTaGCCCCTAGGTCGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: LKEGQHRHHVALESVCHYVPRFQ*PLGRPA
Trigger: TGCAGGCCGACCTAGGGGGCACTGAAATCTTGGCAC...GTAGTGACACACAGACTCTAGTGCTACATGATGCCGGTGTTGACCTTCCTTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361352.9
ENST00000449321.5
CDS-3UTR GCA 90 bp TGTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACAGTGCCAAGATTTCAGTaGCCCCTAGGTCGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: CSTRVCVSLLSTNHPEITVPRFQ*PLGRPA
Trigger: TGCAGGCCGACCTAGGGGGCACTGAAATCTTGGCAC...TGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR GCA 90 bp CAACAGTGTCACCTCTCACAGTGGACCCCTGCAGTCTCTGTCTTTGTGATCTTGCACCCTTCCCTTTACTaGACTAGATCAGGGCCTGAC +
Preference number: 4 (lower is better)
Translates to: QQCHLSQWTPAVSVFVILHPSLY*TRSGPD
Trigger: GTCAGGCCCTGATCTAGTGCAGTAAAGGGAAGGGTG...CAAGATCACAAAGACAGAGACTGCAGGGGTCCACTGTGAGAGGTGACACTGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CCA 90 bp TCTGGGACCACTGTCACTTTTCTGAGGGCATATGTTGGGAAAAGAAAGATCATAGGCACTGGCTCCCGGTaGAGGGTGAGTAGGCCACAG +
Preference number: 4 (lower is better)
Translates to: SGTTVTFLRAYVGKRKIIGTGSR*RVSRPQ
Trigger: CTGTGGCCTACTCACCCTCCACCGGGAGCCAGTGCC...TATGATCTTTCTTTTCCCAACATATGCCCTCAGAAAAGTGACAGTGGTCCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CCA 90 bp ACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACATTTTCTACTCTTCAGCGGCACTaGCTCCCGGTGGAGGGTGAG +
Preference number: 4 (lower is better)
Translates to: TRVCVSLLSTNHPEITFSTLQRH*LPVEGE
Trigger: CTCACCCTCCACCGGGAGCCAGTGCCGCTGAAGAGT...AGAAAATGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR CCA 90 bp TCAGGAAGGTCCCCAACAGTGTCACCTCTCACAGTGGACCCCTGCAGTCTCTGTACTCACCATTGCAGATaGATCTCCCATCAAATGACC +
Preference number: 4 (lower is better)
Translates to: SGRSPTVSPLTVDPCSLCTHHCR*ISHQMT
Trigger: GGTCATTTGATGGGAGATCCATCTGCAATGGTGAGT...ACAGAGACTGCAGGGGTCCACTGTGAGAGGTGACACTGTTGGGGACCTTCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CCA 90 bp GGTCAGGATACCATGGGAACAGTGGAGGCATCAGAAAAGCTGGAACAGAAAACATGTTGTCTCTGCTGCTaGCATCCTCCCGGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: GQDTMGTVEASEKLEQKTCCLCC*HPPGQL
Trigger: CAGCTGACCGGGAGGATGCCAGCAGCAGAGACAACA...TGTTTTCTGTTCCAGCTTTTCTGATGCCTCCACTGTTCCCATGGTATCCTGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456829.7
CDS-3UTR CCA 90 bp AATGAATCAGGAAGGTCCCCAACAGTGTCACCTCTCACAGTGGACCCCTGCAGTATTCTCTCCAAAGCCTaGACTGTGCTGGTCCTTGTG +
Preference number: 4 (lower is better)
Translates to: NESGRSPTVSPLTVDPCSILSKA*TVLVLV
Trigger: CACAAGGACCAGCACAGTCCAGGCTTTGGAGAGAAT...ACTGCAGGGGTCCACTGTGAGAGGTGACACTGTTGGGGACCTTCCTGATTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CCA 90 bp CATCATGTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCTGGTAGAACAGGCTaGGCTTCCTCTCCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: HHVALESVCHYSAPITRKSGRTG*ASSPAA
Trigger: GGCTGCAGGAGAGGAAGCCCAGCCTGTTCTACCAGA...TTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTACATGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449321.5
CDS-3UTR TCA 90 bp GACAGCATATCAAATAGGGTCATTTCCACCAGGATAGGGTATATGAGACACAAGGCTCCCGGTGGAGGGTaGGTAGGCCACAGAAGTGCA +
Preference number: 4 (lower is better)
Translates to: DSISNRVISTRIGYMRHKAPGGG*VGHRSA
Trigger: TGCACTTCTGTGGCCTACTCACCCTCCACCGGGAGC...CTTGTGTCTCATATACCCTATCCTGGTGGAAATGACCCTATTTGATATGCTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR TCA 90 bp GCAGTGGAAGAAAAGACATGTAGGTTGTACAGGCTAGCAAAGCCCAAGAAGAATTGGTGGCGACCATGCTaGGTGTGTAGGGCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: AVEEKTCRLYRLAKPKKNWWRPC*VCRAGP
Trigger: AGGACCTGCCCTACACACTCAGCATGGTCGCCACCA...ATTCTTCTTGGGCTTTGCTAGCCTGTACAACCTACATGTCTTTTCTTCCACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR TCA 90 bp TCATTTGGTCCTCTTGAAGGAAGGTCAACACCGGCATCATGTAGCACTAGAGTCGCAGCCAGGGAAACCTaGGCAGAAGTCTTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: SFGPLEGRSTPASCSTRVAARET*AEVLSS
Trigger: AGAGGACAAGACTTCTGCTCAGGTTTCCCTGGCTGC...GACTCTAGTGCTACATGATGCCGGTGTTGACCTTCCTTCAAGAGGACCAAATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361352.9
ENST00000449321.5
CDS-3UTR TCA 90 bp CATGTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCAGCAGCCAGGGAAACCTaGGCAGAAGTCTTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: HVALESVCHYSAPITRKSAARET*AEVLSS
Trigger: AGAGGACAAGACTTCTGCTCAGGTTTCCCTGGCTGC...TGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTACATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR TCA 90 bp AATGAATCAGGAAGGTCCCCAACAGTGTCACCTCTCACAGTGGACCCCTGCAGTTCCTCCATTGTTTGCTaGGTGTACTTCACACTCTCC +
Preference number: 4 (lower is better)
Translates to: NESGRSPTVSPLTVDPCSSSIVC*VYFTLS
Trigger: GGAGAGTGTGAAGTACACTCAGCAAACAATGGAGGA...ACTGCAGGGGTCCACTGTGAGAGGTGACACTGTTGGGGACCTTCCTGATTCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR TCA 90 bp ATTACATTGATCCAGATGTTGGCTTTCAACTTCCCTCTAACTCCTCCTACGCAAGATGGTGGCCCAGCCTaGGGAATCCACAAGCTCGGC +
Preference number: 4 (lower is better)
Translates to: ITLIQMLAFNFPLTPPTQDGGPA*GIHKLG
Trigger: GCCGAGCTTGTGGATTCCTCAGGCTGGGCCACCATC...TTGCGTAGGAGGAGTTAGAGGGAAGTTGAAAGCCAACATCTGGATCAATGTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR GCA 90 bp GTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACATATACTTCAGGGTGACTaGCGCCTTCGACCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: VALESVCHYSAPITRKSHILQGD*RLRPRL
Trigger: CAACCTGGGTCGAAGGCGGCAGTCACCCTGAAGTAT...ATGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR GCA 90 bp ACAGTGGACCCCTGCAGTCTCTGTCTTTGTGATCTTGACATTACATTGATCCAGGTGCCAAGATTTCAGTaGCCCCTAGGTCGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: TVDPCSLCLCDLDITLIQVPRFQ*PLGRPA
Trigger: TGCAGGCCGACCTAGGGGGCACTGAAATCTTGGCAC...CTGGATCAATGTAATGTCAAGATCACAAAGACAGAGACTGCAGGGGTCCACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR GCA 90 bp GCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACATTTTTCCACCCATGGGGCGTaGAATTCAAGGAGCCCCTAC +
Preference number: 4 (lower is better)
Translates to: ALESVCHYSAPITRKSHFSTHGA*NSRSPY
Trigger: GTAGGGGCTCCTTGAATTGCACGCCCCATGGGTGGA...AAAATGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000392744.4
CDS-3UTR GCA 90 bp CAGGCAGTGGAAGAAAAGACATGTAGGTTGTACAGGCTAGCAAAGCCCAAGAAGTTCTCCTGTTGTCTCTaGTGCTGGCATCCTCCCGGT +
Preference number: 4 (lower is better)
Translates to: QAVEEKTCRLYRLAKPKKFSCCL*CWHPPG
Trigger: ACCGGGAGGATGCCAGCAGCAGAGACAACAGGAGAA...CTTCTTGGGCTTTGCTAGCCTGTACAACCTACATGTCTTTTCTTCCACTGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CCA 90 bp GTCCTCTTGAAGGAAGGTCAACACCGGCATCATGTAGCACTAGAGTCTGTGTGTAATAAGAAGGCCTGGTaGCCCTGGGAGATGGCTTTC +
Preference number: 4 (lower is better)
Translates to: VLLKEGQHRHHVALESVCNKKAW*PWEMAF
Trigger: GAAAGCCATCTCCCAGGGCCACCAGGCCTTCTTATT...ACACACAGACTCTAGTGCTACATGATGCCGGTGTTGACCTTCCTTCAAGAGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361352.9
ENST00000449321.5
CDS-3UTR CCA 90 bp TCATGTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCTCCAATAAGAAGGCCTaGTGGCCCTGGGAGATGGCT +
Preference number: 4 (lower is better)
Translates to: SCSTRVCVSLLSTNHPEISNKKA*WPWEMA
Trigger: AGCCATCTCCCAGGGCCACCAGGCCTTCTTATTGGA...GATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTACATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR CCA 90 bp CATCATGTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCCAATAAGAAGGCCTaGTGGCCCTGGGAGATGGCT +
Preference number: 4 (lower is better)
Translates to: HHVALESVCHYSAPITRKSNKKA*WPWEMA
Trigger: AGCCATCTCCCAGGGCCACCAGGCCTTCTTATTGGA...TTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTACATGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR CCA 90 bp GCATCATGTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAGCCTTCGACCCAGGTTaGAGGTTACCCACATTGCAA +
Preference number: 4 (lower is better)
Translates to: ASCSTRVCVSLLSTNHPEAFDPG*RLPTLQ
Trigger: TTGCAATGTGGGTAACCTCCAACCTGGGTCGAAGGC...TTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTACATGATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361352.9
ENST00000449321.5
CDS-3UTR CCA 90 bp ACACCGGCATCATGTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACTATCCTGGCTACTCATaGGGCTCTGCATACTTCCCG +
Preference number: 4 (lower is better)
Translates to: TPASCSTRVCVSLLSTNHYPGYS*GSAYFP
Trigger: CGGGAAGTATGCAGAGCCCCATGAGTAGCCAGGATA...GTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTACATGATGCCGGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361352.9
ENST00000449321.5
CDS-3UTR CCA 90 bp GAAGGAAGGTCAACACCGGCATCATGTAGCACTAGAGTCTGTGTGTCACTACTCCGCAGACCTCTGACCTaGGCAAGTTCTCTGGTAGAA +
Preference number: 4 (lower is better)
Translates to: EGRSTPASCSTRVCVSLLRRPLT*ASSLVE
Trigger: TTCTACCAGAGAACTTGCCCAGGTCAGAGGTCTGCG...GAGTAGTGACACACAGACTCTAGTGCTACATGATGCCGGTGTTGACCTTCCTTC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449321.5
CDS-3UTR CCA 90 bp CAACAGTGTCACCTCTCACAGTGGACCCCTGCAGTCTCTGTCTTTGTGATCTTGATTCTCTCCAAAGCCTaGACTGTGCTGGTCCTTGTG +
Preference number: 4 (lower is better)
Translates to: QQCHLSQWTPAVSVFVILILSKA*TVLVLV
Trigger: CACAAGGACCAGCACAGTCCAGGCTTTGGAGAGAAT...CAAGATCACAAAGACAGAGACTGCAGGGGTCCACTGTGAGAGGTGACACTGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CCA 90 bp TCTGGGACCACTGTCACTTTTCTGAGGGCATATGTTGGGAAAAGAAAGATCATAATGGTGGAGCCTGCATaGGCACGCATCCAGGCCACG +
Preference number: 4 (lower is better)
Translates to: SGTTVTFLRAYVGKRKIIMVEPA*ARIQAT
Trigger: CGTGGCCTGGATGCGTGCCCATGCAGGCTCCACCAT...TATGATCTTTCTTTTCCCAACATATGCCCTCAGAAAAGTGACAGTGGTCCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CCA 90 bp TGTTTTTCATGTTGTTTCCCTGGAAACCCTGGGAGGAACATTACTGCCTATGAAATGGTGGAGCCTGCATaGGCACGCATCCAGGCCACG +
Preference number: 4 (lower is better)
Translates to: CFSCCFPGNPGRNITAYEMVEPA*ARIQAT
Trigger: CGTGGCCTGGATGCGTGCCCATGCAGGCTCCACCAT...TTCATAGGCAGTAATGTTCCTCCCAGGGTTTCCAGGGAAACAACATGAAAAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CCA 90 bp GCAGTGGAAGAAAAGACATGTAGGTTGTACAGGCTAGCAAAGCCCAAGAAGAATCAACCGAAGGCATGGTaGAGCCTGCATGGGCACGCA +
Preference number: 4 (lower is better)
Translates to: AVEEKTCRLYRLAKPKKNQPKAW*SLHGHA
Trigger: TGCGTGCCCATGCAGGCTCCACCATGCCTTCGGTTG...ATTCTTCTTGGGCTTTGCTAGCCTGTACAACCTACATGTCTTTTCTTCCACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CCA 90 bp AGGGTATATGAGACACAAGGGTCAGGAACGATTACGGGGAGCTCCTTTCTTCCTAGGGTCAGGATACCATaGGAACAGTGGAGGCATCAG +
Preference number: 4 (lower is better)
Translates to: RVYETQGSGTITGSSFLPRVRIP*EQWRHQ
Trigger: CTGATGCCTCCACTGTTCCCATGGTATCCTGACCCT...AGGAAGAAAGGAGCTCCCCGTAATCGTTCCTGACCCTTGTGTCTCATATACCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456829.7
CDS-3UTR TCA 90 bp TCTGGGACCACTGTCACTTTTCTGAGGGCATATGTTGGGAAAAGAAAGATCATAGCACATACTTCAGGGTaGCTGCCGCCTTCGACCCAG +
Preference number: 4 (lower is better)
Translates to: SGTTVTFLRAYVGKRKIIAHTSG*LPPSTQ
Trigger: CTGGGTCGAAGGCGGCAGTCACCCTGAAGTATGTGC...TATGATCTTTCTTTTCCCAACATATGCCCTCAGAAAAGTGACAGTGGTCCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR TCA 90 bp AGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACATTTGCAGCCAGGGAAACCTaGGCAGAAGTCTTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: STRVCVSLLSTNHPEITFAARET*AEVLSS
Trigger: AGAGGACAAGACTTCTGCTCAGGTTTCCCTGGCTGC...AAATGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR TCA 90 bp GTATATGAGACACAAGGGTCAGGAACGATTACGGGGAGCTCCTTTCTTCCTAATGCAGCCAGGGAAACCTaGGCAGAAGTCTTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: VYETQGSGTITGSSFLPNAARET*AEVLSS
Trigger: AGAGGACAAGACTTCTGCTCAGGTTTCCCTGGCTGC...ATTAGGAAGAAAGGAGCTCCCCGTAATCGTTCCTGACCCTTGTGTCTCATATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR TCA 90 bp ACACCGGCATCATGTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACGGATCTCCCATCAAATaGCCTGGCTTCATGTTAGGC +
Preference number: 4 (lower is better)
Translates to: TPASCSTRVCVSLLSTNHGSPIK*PGFMLG
Trigger: GCCTAACATGAAGCCAGGTCATTTGATGGGAGATCC...GTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTACATGATGCCGGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361352.9
ENST00000449321.5
CDS-3UTR TCA 90 bp TCATGTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCGCCTGTATTCGCAGCTaGGATGTATCCTGGCTACTC +
Preference number: 4 (lower is better)
Translates to: SCSTRVCVSLLSTNHPEIACIRS*DVSWLL
Trigger: GAGTAGCCAGGATACATCTCAGCTGCGAATACAGGC...GATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTACATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR TCA 90 bp GTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACATGCCTGTATTCGCAGCTaGGATGTATCCTGGCTACTC +
Preference number: 4 (lower is better)
Translates to: VALESVCHYSAPITRKSHACIRS*DVSWLL
Trigger: GAGTAGCCAGGATACATCTCAGCTGCGAATACAGGC...ATGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR TCA 90 bp CAGGCAGTGGAAGAAAAGACATGTAGGTTGTACAGGCTAGCAAAGCCCAAGAAGGCCTGTATTCGCAGCTaGGATGTATCCTGGCTACTC +
Preference number: 4 (lower is better)
Translates to: QAVEEKTCRLYRLAKPKKACIRS*DVSWLL
Trigger: GAGTAGCCAGGATACATCTCAGCTGCGAATACAGGC...CTTCTTGGGCTTTGCTAGCCTGTACAACCTACATGTCTTTTCTTCCACTGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR TCA 90 bp CATCATGTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAAGCCTGTATTCGCAGCTaGGATGTATCCTGGCTACTC +
Preference number: 4 (lower is better)
Translates to: HHVALESVCHYSAPITRKACIRS*DVSWLL
Trigger: GAGTAGCCAGGATACATCTCAGCTGCGAATACAGGC...TTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTACATGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR TCA 90 bp AGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACATTTTTCTACGCAGACCTCTaGCCTGGGCAAGTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: STRVCVSLLSTNHPEITFFYADL*PGQVLW
Trigger: CCAGAGAACTTGCCCAGGTCAGAGGTCTGCGTAGAA...AAATGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392744.4
ENST00000449321.5
CDS-3UTR TCA 90 bp AGGGTATATGAGACACAAGGGTCAGGAACGATTACGGGGAGCTCCTTTCTTCCTCTGTGCTGGTCCTTGTaGCTTATCAACCCACAGAGA +
Preference number: 4 (lower is better)
Translates to: RVYETQGSGTITGSSFLPLCWSL*LINPQR
Trigger: TCTCTGTGGGTTGATAAGTCACAAGGACCAGCACAG...AGGAAGAAAGGAGCTCCCCGTAATCGTTCCTGACCCTTGTGTCTCATATACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR TCA 90 bp GACCACTGTCACTTTTCTGAGGGCATATGTTGGGAAAAGAAAGATCATATCCAAGATGGTGGCCCAGCCTaGGGAATCCACAAGCTCGGC +
Preference number: 4 (lower is better)
Translates to: DHCHFSEGICWEKKDHIQDGGPA*GIHKLG
Trigger: GCCGAGCTTGTGGATTCCTCAGGCTGGGCCACCATC...TTGGATATGATCTTTCTTTTCCCAACATATGCCCTCAGAAAAGTGACAGTGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR GCA 90 bp CATCATGTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAAAGACATCCCTGGAGCTaGTGTCCCCCTCCAATAAGA +
Preference number: 4 (lower is better)
Translates to: HHVALESVCHYSAPITRKRHPWS*CPPPIR
Trigger: TCTTATTGGAGGGGGACAGCAGCTCCAGGGATGTCT...TTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTACATGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR GCA 90 bp TCATGTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCAGACATCCCTGGAGCTaGTGTCCCCCTCCAATAAGA +
Preference number: 4 (lower is better)
Translates to: SCSTRVCVSLLSTNHPEIRHPWS*CPPPIR
Trigger: TCTTATTGGAGGGGGACAGCAGCTCCAGGGATGTCT...GATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTACATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR GCA 90 bp GATCCAGATGTTGGCTTTCAACTTCCCTCTAACTCCTCCTACGCAAGCTTACCAAGACATCCCTGGAGCTaGTGTCCCCCTCCAATAAGA +
Preference number: 4 (lower is better)
Translates to: DPDVGFQLPSNSSYASLPRHPWS*CPPPIR
Trigger: TCTTATTGGAGGGGGACAGCAGCTCCAGGGATGTCT...TGGTAAGCTTGCGTAGGAGGAGTTAGAGGGAAGTTGAAAGCCAACATCTGGATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR GCA 90 bp AGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACATTTATACTTCAGGGTGACTaGCGCCTTCGACCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: STRVCVSLLSTNHPEITFILQGD*RLRPRL
Trigger: CAACCTGGGTCGAAGGCGGCAGTCACCCTGAAGTAT...AAATGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR GCA 90 bp TGTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACATCCAGAGGCAGCTCCTaGACATACTTCAGGGTGACT +
Preference number: 4 (lower is better)
Translates to: CSTRVCVSLLSTNHPEITSRGSS*TYFRVT
Trigger: AGTCACCCTGAAGTATGTGCAGGAGCTGCCTCTGGA...TGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR GCA 90 bp GTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACATTCCAGAGGCAGCTCCTaGACATACTTCAGGGTGACT +
Preference number: 4 (lower is better)
Translates to: VALESVCHYSAPITRKSHSRGSS*TYFRVT
Trigger: AGTCACCCTGAAGTATGTGCAGGAGCTGCCTCTGGA...ATGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR GCA 90 bp GAAGGAAGGTCAACACCGGCATCATGTAGCACTAGAGTCTGTGTGTCACTACTCCAGTGTTTCCTTGGCTaGCTGTATTCGCAGCTGAGA +
Preference number: 4 (lower is better)
Translates to: EGRSTPASCSTRVCVSLLQCFLG*LYSQLR
Trigger: TCTCAGCTGCGAATACAGGCAGCCAAGGAAACACTG...GAGTAGTGACACACAGACTCTAGTGCTACATGATGCCGGTGTTGACCTTCCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361352.9
ENST00000449321.5
CDS-3UTR GCA 90 bp CTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACATTTTCTTGTGCCAAGATTTCAGTaGCCCCTAGGTCGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: LESVCHYSAPITRKSHFLVPRFQ*PLGRPA
Trigger: TGCAGGCCGACCTAGGGGGCACTGAAATCTTGGCAC...AAGAAAATGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR GCA 90 bp GTCCTCTTGAAGGAAGGTCAACACCGGCATCATGTAGCACTAGAGTCTGTGTGTAATGTTCTGGAGTGGTaGCAAGATTTCAGTGCCCCC +
Preference number: 4 (lower is better)
Translates to: VLLKEGQHRHHVALESVCNVLEW*QDFSAP
Trigger: GGGGGCACTGAAATCTTGGCACCACTCCAGAACATT...ACACACAGACTCTAGTGCTACATGATGCCGGTGTTGACCTTCCTTCAAGAGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361352.9
ENST00000449321.5
CDS-3UTR GCA 90 bp CAGGCAGTGGAAGAAAAGACATGTAGGTTGTACAGGCTAGCAAAGCCCAAGAAGTCCTCTACCACAGGCTaGAGAGAGCGTTTCAGAGTC +
Preference number: 4 (lower is better)
Translates to: QAVEEKTCRLYRLAKPKKSSTTG*RERFRV
Trigger: GACTCTGAAACGCTCTCTGCAGCCTGTGGTAGAGGA...CTTCTTGGGCTTTGCTAGCCTGTACAACCTACATGTCTTTTCTTCCACTGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR GCA 90 bp ACAGTGGACCCCTGCAGTCTCTGTCTTTGTGATCTTGACATTACATTGATCCAGTCCTTACCATTGCTGTaGAGCCAGATCACGGCCAGG +
Preference number: 4 (lower is better)
Translates to: TVDPCSLCLCDLDITLIQSLPLL*SQITAR
Trigger: CCTGGCCGTGATCTGGCTGCACAGCAATGGTAAGGA...CTGGATCAATGTAATGTCAAGATCACAAAGACAGAGACTGCAGGGGTCCACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR GCA 90 bp AGGGTATATGAGACACAAGGGTCAGGAACGATTACGGGGAGCTCCTTTCTTCCTTCAAGTCCTTACCATTaGTGTGCAGCCAGATCACGG +
Preference number: 4 (lower is better)
Translates to: RVYETQGSGTITGSSFLPSSPYH*CAARSR
Trigger: CCGTGATCTGGCTGCACAGCAATGGTAAGGACTTGA...AGGAAGAAAGGAGCTCCCCGTAATCGTTCCTGACCCTTGTGTCTCATATACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CCA 90 bp AGTCTCTGTCTTTGTGATCTTGACATTACATTGATCCAGATGTTGGCTTTCAACGGCACTGGCTCCCGGTaGAGGGTGAGTAGGCCACAG +
Preference number: 4 (lower is better)
Translates to: SLCLCDLDITLIQMLAFNGTGSR*RVSRPQ
Trigger: CTGTGGCCTACTCACCCTCCACCGGGAGCCAGTGCC...GTTGAAAGCCAACATCTGGATCAATGTAATGTCAAGATCACAAAGACAGAGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CCA 90 bp GAAGAAAAGACATGTAGGTTGTACAGGCTAGCAAAGCCCAAGAAGAATGAATCAACTCTTCAGCGGCACTaGCTCCCGGTGGAGGGTGAG +
Preference number: 4 (lower is better)
Translates to: EEKTCRLYRLAKPKKNESTLQRH*LPVEGE
Trigger: CTCACCCTCCACCGGGAGCCAGTGCCGCTGAAGAGT...TGATTCATTCTTCTTGGGCTTTGCTAGCCTGTACAACCTACATGTCTTTTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CCA 90 bp AGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACATTTGGTGGCCCTGGGAGATaGCTTTCTCATAGTTGGTGC +
Preference number: 4 (lower is better)
Translates to: STRVCVSLLSTNHPEITFGGPGR*LSHSWC
Trigger: GCACCAACTATGAGAAAGCCATCTCCCAGGGCCACC...AAATGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR CCA 90 bp GTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACATAATAAGAAGGCCTGGTaGCCCTGGGAGATGGCTTTC +
Preference number: 4 (lower is better)
Translates to: VALESVCHYSAPITRKSHNKKAW*PWEMAF
Trigger: GAAAGCCATCTCCCAGGGCCACCAGGCCTTCTTATT...ATGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR CCA 90 bp TCATTTGGTCCTCTTGAAGGAAGGTCAACACCGGCATCATGTAGCACTAGAGTCAATAAGAAGGCCTGGTaGCCCTGGGAGATGGCTTTC +
Preference number: 4 (lower is better)
Translates to: SFGPLEGRSTPASCSTRVNKKAW*PWEMAF
Trigger: GAAAGCCATCTCCCAGGGCCACCAGGCCTTCTTATT...GACTCTAGTGCTACATGATGCCGGTGTTGACCTTCCTTCAAGAGGACCAAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361352.9
ENST00000449321.5
CDS-3UTR CCA 90 bp AGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACATTTTCCAATAAGAAGGCCTaGTGGCCCTGGGAGATGGCT +
Preference number: 4 (lower is better)
Translates to: STRVCVSLLSTNHPEITFSNKKA*WPWEMA
Trigger: AGCCATCTCCCAGGGCCACCAGGCCTTCTTATTGGA...AAATGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR CCA 90 bp ACAGTGGACCCCTGCAGTCTCTGTCTTTGTGATCTTGACATTACATTGATCCAGTCCAATAAGAAGGCCTaGTGGCCCTGGGAGATGGCT +
Preference number: 4 (lower is better)
Translates to: TVDPCSLCLCDLDITLIQSNKKA*WPWEMA
Trigger: AGCCATCTCCCAGGGCCACCAGGCCTTCTTATTGGA...CTGGATCAATGTAATGTCAAGATCACAAAGACAGAGACTGCAGGGGTCCACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CCA 90 bp CATCATGTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAAGCCTTCGACCCAGGTTaGAGGTTACCCACATTGCAA +
Preference number: 4 (lower is better)
Translates to: HHVALESVCHYSAPITRKAFDPG*RLPTLQ
Trigger: TTGCAATGTGGGTAACCTCCAACCTGGGTCGAAGGC...TTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTACATGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR CCA 90 bp CAACAGTGTCACCTCTCACAGTGGACCCCTGCAGTCTCTGTCTTTGTGATCTTGGACGACCCAGAGAACTaGTATCTAGGATTCAGGACA +
Preference number: 4 (lower is better)
Translates to: QQCHLSQWTPAVSVFVILDDPEN*YLGFRT
Trigger: TGTCCTGAATCCTAGATACCAGTTCTCTGGGTCGTC...CAAGATCACAAAGACAGAGACTGCAGGGGTCCACTGTGAGAGGTGACACTGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CCA 90 bp AGGGTATATGAGACACAAGGGTCAGGAACGATTACGGGGAGCTCCTTTCTTCCTTTCTCAATGCCATGCTaGGAATCTATGGTGGCGACC +
Preference number: 4 (lower is better)
Translates to: RVYETQGSGTITGSSFLPFSMPC*ESMVAT
Trigger: GGTCGCCACCATAGATTCCCAGCATGGCATTGAGAA...AGGAAGAAAGGAGCTCCCCGTAATCGTTCCTGACCCTTGTGTCTCATATACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CCA 90 bp GAAGGAAGGTCAACACCGGCATCATGTAGCACTAGAGTCTGTGTGTCACTACTCTTCTCAATGCCATGCTaGGAATCTATGGTGGCGACC +
Preference number: 4 (lower is better)
Translates to: EGRSTPASCSTRVCVSLLFSMPC*ESMVAT
Trigger: GGTCGCCACCATAGATTCCCAGCATGGCATTGAGAA...GAGTAGTGACACACAGACTCTAGTGCTACATGATGCCGGTGTTGACCTTCCTTC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361352.9
ENST00000449321.5
CDS-3UTR CCA 90 bp ACACCGGCATCATGTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACAAGGGGCAGTTGGATTaGACCTTCTCAATGCCATGC +
Preference number: 4 (lower is better)
Translates to: TPASCSTRVCVSLLSTNHKGQLD*TFSMPC
Trigger: GCATGGCATTGAGAAGGTCCAATCCAACTGCCCCTT...GTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTACATGATGCCGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361352.9
ENST00000449321.5
CDS-3UTR CCA 90 bp GTCCTCTTGAAGGAAGGTCAACACCGGCATCATGTAGCACTAGAGTCTGTGTGTTCTCCAAAACCACGCTaGGGGTATGCACCTCATTGT +
Preference number: 4 (lower is better)
Translates to: VLLKEGQHRHHVALESVCSPKPR*GYAPHC
Trigger: ACAATGAGGTGCATACCCCCAGCGTGGTTTTGGAGA...ACACACAGACTCTAGTGCTACATGATGCCGGTGTTGACCTTCCTTCAAGAGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361352.9
ENST00000449321.5
CDS-3UTR CCA 90 bp ACACCGGCATCATGTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACTCTCCAAAACCACGCTaGGGGTATGCACCTCATTGT +
Preference number: 4 (lower is better)
Translates to: TPASCSTRVCVSLLSTNHSPKPR*GYAPHC
Trigger: ACAATGAGGTGCATACCCCCAGCGTGGTTTTGGAGA...GTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTACATGATGCCGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361352.9
ENST00000449321.5
CDS-3UTR CCA 90 bp CATCATGTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATATCCTGGCTACTCATaGGGCTCTGCATACTTCCCG +
Preference number: 4 (lower is better)
Translates to: HHVALESVCHYSAPITRKYPGYS*GSAYFP
Trigger: CGGGAAGTATGCAGAGCCCCATGAGTAGCCAGGATA...TTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTACATGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR CCA 90 bp TCATGTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCGAAATCCTCCACCCATaGGGCGTGCAATTCAAGGAG +
Preference number: 4 (lower is better)
Translates to: SCSTRVCVSLLSTNHPEIEILHP*GVQFKE
Trigger: CTCCTTGAATTGCACGCCCCATGGGTGGAGGATTTC...GATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTACATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392744.4
CDS-3UTR CCA 90 bp AGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACATTTGTGGCAGGGGTGAAGTaGAGAACTCGGAACCAGACA +
Preference number: 4 (lower is better)
Translates to: STRVCVSLLSTNHPEITFVAGVK*RTRNQT
Trigger: TGTCTGGTTCCGAGTTCTCCACTTCACCCCTGCCAC...AAATGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392744.4
CDS-3UTR CCA 90 bp GTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACATGAGAAGCTCTCAGGCTaGGCAATACTCACCAAGGTG +
Preference number: 4 (lower is better)
Translates to: VALESVCHYSAPITRKSHEKLSG*AILTKV
Trigger: CACCTTGGTGAGTATTGCCCAGCCTGAGAGCTTCTC...ATGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392744.4
CDS-3UTR CCA 90 bp GGTCAGGATACCATGGGAACAGTGGAGGCATCAGAAAAGCTGGAACAGAAAACAAGCACCCAACAGAATTaGCCTTGGGACGTCCCTATG +
Preference number: 4 (lower is better)
Translates to: GQDTMGTVEASEKLEQKTSTQQN*PWDVPM
Trigger: CATAGGGACGTCCCAAGGCCAATTCTGTTGGGTGCT...TGTTTTCTGTTCCAGCTTTTCTGATGCCTCCACTGTTCCCATGGTATCCTGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456829.7
CDS-3UTR TCA 90 bp GAAGAAAAGACATGTAGGTTGTACAGGCTAGCAAAGCCCAAGAAGAATGAATCAGCACATACTTCAGGGTaGCTGCCGCCTTCGACCCAG +
Preference number: 4 (lower is better)
Translates to: EEKTCRLYRLAKPKKNESAHTSG*LPPSTQ
Trigger: CTGGGTCGAAGGCGGCAGTCACCCTGAAGTATGTGC...TGATTCATTCTTCTTGGGCTTTGCTAGCCTGTACAACCTACATGTCTTTTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR TCA 90 bp CATCATGTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAAGGATCTCCCATCAAATaGCCTGGCTTCATGTTAGGC +
Preference number: 4 (lower is better)
Translates to: HHVALESVCHYSAPITRKGSPIK*PGFMLG
Trigger: GCCTAACATGAAGCCAGGTCATTTGATGGGAGATCC...TTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTACATGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR TCA 90 bp CATGTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCAATCATTTGGTCCTCTTaGAGGAAGGTCAACACCGGC +
Preference number: 4 (lower is better)
Translates to: HVALESVCHYSAPITRKSIIWSS*RKVNTG
Trigger: GCCGGTGTTGACCTTCCTTCAAGAGGACCAAATGAT...TGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361352.9
ENST00000449321.5
CDS-3UTR TCA 90 bp TCATTTGGTCCTCTTGAAGGAAGGTCAACACCGGCATCATGTAGCACTAGAGTCATCATTTGGTCCTCTTaGAGGAAGGTCAACACCGGC +
Preference number: 4 (lower is better)
Translates to: SFGPLEGRSTPASCSTRVIIWSS*RKVNTG
Trigger: GCCGGTGTTGACCTTCCTTCAAGAGGACCAAATGAT...GACTCTAGTGCTACATGATGCCGGTGTTGACCTTCCTTCAAGAGGACCAAATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361352.9
ENST00000449321.5
CDS-3UTR TCA 90 bp CATCATGTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAAGATCATACATCAGGATaGAATCCTCCACCCATGGGG +
Preference number: 4 (lower is better)
Translates to: HHVALESVCHYSAPITRKDHTSG*NPPPMG
Trigger: CCCCATGGGTGGAGGATTTCATCCTGATGTATGATC...TTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTACATGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392744.4
CDS-3UTR TCA 90 bp GACCACTGTCACTTTTCTGAGGGCATATGTTGGGAAAAGAAAGATCATATCCAAAGTTCCCCTCTGGGCTaGGATGCAGAAGGAGGACGG +
Preference number: 4 (lower is better)
Translates to: DHCHFSEGICWEKKDHIQSSPLG*DAEGGR
Trigger: CCGTCCTCCTTCTGCATCTCAGCCCAGAGGGGAACT...TTGGATATGATCTTTCTTTTCCCAACATATGCCCTCAGAAAAGTGACAGTGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR GCA 90 bp GAAGGAAGGTCAACACCGGCATCATGTAGCACTAGAGTCTGTGTGTCACTACTCAGTAGGCCACAGAAGTaGACCATGGTGATGCAAGAT +
Preference number: 4 (lower is better)
Translates to: EGRSTPASCSTRVCVSLLSRPQK*TMVMQD
Trigger: ATCTTGCATCACCATGGTGCACTTCTGTGGCCTACT...GAGTAGTGACACACAGACTCTAGTGCTACATGATGCCGGTGTTGACCTTCCTTC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361352.9
ENST00000449321.5
CDS-3UTR GCA 90 bp AGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACATTTAGACATCCCTGGAGCTaGTGTCCCCCTCCAATAAGA +
Preference number: 4 (lower is better)
Translates to: STRVCVSLLSTNHPEITFRHPWS*CPPPIR
Trigger: TCTTATTGGAGGGGGACAGCAGCTCCAGGGATGTCT...AAATGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR GCA 90 bp CATCATGTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAAGGAGGTTACCCACATTaGAAGAGAAGACATCCCTGG +
Preference number: 4 (lower is better)
Translates to: HHVALESVCHYSAPITRKGGYPH*KRRHPW
Trigger: CCAGGGATGTCTTCTCTTGCAATGTGGGTAACCTCC...TTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTACATGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR GCA 90 bp GTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACATGGAGGTTACCCACATTaGAAGAGAAGACATCCCTGG +
Preference number: 4 (lower is better)
Translates to: VALESVCHYSAPITRKSHGGYPH*KRRHPW
Trigger: CCAGGGATGTCTTCTCTTGCAATGTGGGTAACCTCC...ATGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR GCA 90 bp CATGTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCAGGAGGTTACCCACATTaGAAGAGAAGACATCCCTGG +
Preference number: 4 (lower is better)
Translates to: HVALESVCHYSAPITRKSGGYPH*KRRHPW
Trigger: CCAGGGATGTCTTCTCTTGCAATGTGGGTAACCTCC...TGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR GCA 90 bp TCATGTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACCTTCTCAATGCCATaGTGGGAATCTATGGTGGCG +
Preference number: 4 (lower is better)
Translates to: SCSTRVCVSLLSTNHPEITFSMP*WESMVA
Trigger: CGCCACCATAGATTCCCAGCATGGCATTGAGAAGGT...GATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTACATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR GCA 90 bp ACCTGGAGCAGAGAAGCGAAGTGGAGTAAGCATCCTTTACTTTTATGGCAAAAACTACTCATGGGGCTCTaGATACTTCCCGAGCGGTCC +
Preference number: 4 (lower is better)
Translates to: TWSREAKWSKHPLLLWQKLLMGL*ILPERS
Trigger: GGACCGCTCGGGAAGTATGCAGAGCCCCATGAGTAG...TTTTTGCCATAAAAGTAAAGGATGCTTACTCCACTTCGCTTCTCTGCTCCAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR GCA 90 bp TCTGGGACCACTGTCACTTTTCTGAGGGCATATGTTGGGAAAAGAAAGATCATACTACTCATGGGGCTCTaGATACTTCCCGAGCGGTCC +
Preference number: 4 (lower is better)
Translates to: SGTTVTFLRAYVGKRKIILLMGL*ILPERS
Trigger: GGACCGCTCGGGAAGTATGCAGAGCCCCATGAGTAG...TATGATCTTTCTTTTCCCAACATATGCCCTCAGAAAAGTGACAGTGGTCCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR GCA 90 bp CATGTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACAGTGTTTCCTTGGCTaGCTGTATTCGCAGCTGAGA +
Preference number: 4 (lower is better)
Translates to: HVALESVCHYSAPITRKSQCFLG*LYSQLR
Trigger: TCTCAGCTGCGAATACAGGCAGCCAAGGAAACACTG...TGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR GCA 90 bp TCATGTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCCAGTGTTTCCTTGGCTaGCTGTATTCGCAGCTGAGA +
Preference number: 4 (lower is better)
Translates to: SCSTRVCVSLLSTNHPEIQCFLG*LYSQLR
Trigger: TCTCAGCTGCGAATACAGGCAGCCAAGGAAACACTG...GATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTACATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR GCA 90 bp GAGTCCACTATGCAAGTCACACAAGTCTTCCTAATACCAGGTAACTCAACAACTGTGCCAAGATTTCAGTaGCCCCTAGGTCGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: ESTMQVTQVFLIPGNSTTVPRFQ*PLGRPA
Trigger: TGCAGGCCGACCTAGGGGGCACTGAAATCTTGGCAC...AGTTGTTGAGTTACCTGGTATTAGGAAGACTTGTGTGACTTGCATAGTGGACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456829.7
CDS-3UTR GCA 90 bp GTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACATAATGTTCTGGAGTGGTaGCAAGATTTCAGTGCCCCC +
Preference number: 4 (lower is better)
Translates to: VALESVCHYSAPITRKSHNVLEW*QDFSAP
Trigger: GGGGGCACTGAAATCTTGGCACCACTCCAGAACATT...ATGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR GCA 90 bp TGTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACAAATGTTCTGGAGTGGTaGCAAGATTTCAGTGCCCCC +
Preference number: 4 (lower is better)
Translates to: CSTRVCVSLLSTNHPEITNVLEW*QDFSAP
Trigger: GGGGGCACTGAAATCTTGGCACCACTCCAGAACATT...TGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR GCA 90 bp TCAGGAAGGTCCCCAACAGTGTCACCTCTCACAGTGGACCCCTGCAGTCTCTGTGAGGGTGAAATCATTTaGCCATCATCACATAACTAT +
Preference number: 4 (lower is better)
Translates to: SGRSPTVSPLTVDPCSLCEGEII*PSSHNY
Trigger: ATAGTTATGTGATGATGGGCAAATGATTTCACCCTC...ACAGAGACTGCAGGGGTCCACTGTGAGAGGTGACACTGTTGGGGACCTTCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456829.7
CDS-3UTR CCA 90 bp AGGGTATATGAGACACAAGGGTCAGGAACGATTACGGGGAGCTCCTTTCTTCCTCAGAGTCTTCATCCATaGGGAACACAAAGAAGGCCT +
Preference number: 4 (lower is better)
Translates to: RVYETQGSGTITGSSFLPQSLHP*GTQRRP
Trigger: AGGCCTTCTTTGTGTTCCCCATGGATGAAGACTCTG...AGGAAGAAAGGAGCTCCCCGTAATCGTTCCTGACCCTTGTGTCTCATATACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CCA 90 bp CTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACATTTTCTTGGTGGCCCTGGGAGATaGCTTTCTCATAGTTGGTGC +
Preference number: 4 (lower is better)
Translates to: LESVCHYSAPITRKSHFLGGPGR*LSHSWC
Trigger: GCACCAACTATGAGAAAGCCATCTCCCAGGGCCACC...AAGAAAATGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR CCA 90 bp AAAAGAAGTCAGCCTACAACAGAAGATAGAGGGTCAGGATACCATGGGAACAGTGGTGGCCCTGGGAGATaGCTTTCTCATAGTTGGTGC +
Preference number: 4 (lower is better)
Translates to: KRSQPTTEDRGSGYHGNSGGPGR*LSHSWC
Trigger: GCACCAACTATGAGAAAGCCATCTCCCAGGGCCACC...ACTGTTCCCATGGTATCCTGACCCTCTATCTTCTGTTGTAGGCTGACTTCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456829.7
CDS-3UTR CCA 90 bp ACAGTGGACCCCTGCAGTCTCTGTCTTTGTGATCTTGACATTACATTGATCCAGAATAAGAAGGCCTGGTaGCCCTGGGAGATGGCTTTC +
Preference number: 4 (lower is better)
Translates to: TVDPCSLCLCDLDITLIQNKKAW*PWEMAF
Trigger: GAAAGCCATCTCCCAGGGCCACCAGGCCTTCTTATT...CTGGATCAATGTAATGTCAAGATCACAAAGACAGAGACTGCAGGGGTCCACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CCA 90 bp GCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACATTTTGCCTTCGACCCAGGTTaGAGGTTACCCACATTGCAA +
Preference number: 4 (lower is better)
Translates to: ALESVCHYSAPITRKSHFAFDPG*RLPTLQ
Trigger: TTGCAATGTGGGTAACCTCCAACCTGGGTCGAAGGC...AAAATGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR CCA 90 bp ACACCGGCATCATGTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACGACGACCCAGAGAACTaGTATCTAGGATTCAGGACA +
Preference number: 4 (lower is better)
Translates to: TPASCSTRVCVSLLSTNHDDPEN*YLGFRT
Trigger: TGTCCTGAATCCTAGATACCAGTTCTCTGGGTCGTC...GTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTACATGATGCCGGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361352.9
ENST00000449321.5
CDS-3UTR CCA 90 bp CATCATGTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATTCTCAATGCCATGCTaGGAATCTATGGTGGCGACC +
Preference number: 4 (lower is better)
Translates to: HHVALESVCHYSAPITRKFSMPC*ESMVAT
Trigger: GGTCGCCACCATAGATTCCCAGCATGGCATTGAGAA...TTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTACATGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR CCA 90 bp CATGTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCATTCTCAATGCCATGCTaGGAATCTATGGTGGCGACC +
Preference number: 4 (lower is better)
Translates to: HVALESVCHYSAPITRKSFSMPC*ESMVAT
Trigger: GGTCGCCACCATAGATTCCCAGCATGGCATTGAGAA...TGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR CCA 90 bp TCATTTGGTCCTCTTGAAGGAAGGTCAACACCGGCATCATGTAGCACTAGAGTCAAGGGGCAGTTGGATTaGACCTTCTCAATGCCATGC +
Preference number: 4 (lower is better)
Translates to: SFGPLEGRSTPASCSTRVKGQLD*TFSMPC
Trigger: GCATGGCATTGAGAAGGTCCAATCCAACTGCCCCTT...GACTCTAGTGCTACATGATGCCGGTGTTGACCTTCCTTCAAGAGGACCAAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361352.9
ENST00000449321.5
CDS-3UTR CCA 90 bp TTGAAGGAAGGTCAACACCGGCATCATGTAGCACTAGAGTCTGTGTGTCACTACGACTCAAGGGGCAGTTaGATTGGACCTTCTCAATGC +
Preference number: 4 (lower is better)
Translates to: LKEGQHRHHVALESVCHYDSRGS*IGPSQC
Trigger: GCATTGAGAAGGTCCAATCCAACTGCCCCTTGAGTC...GTAGTGACACACAGACTCTAGTGCTACATGATGCCGGTGTTGACCTTCCTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361352.9
ENST00000449321.5
CDS-3UTR CCA 90 bp TCATGTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCGACTCAAGGGGCAGTTaGATTGGACCTTCTCAATGC +
Preference number: 4 (lower is better)
Translates to: SCSTRVCVSLLSTNHPEIDSRGS*IGPSQC
Trigger: GCATTGAGAAGGTCCAATCCAACTGCCCCTTGAGTC...GATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTACATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR CCA 90 bp GTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACATTCTCCAAAACCACGCTaGGGGTATGCACCTCATTGT +
Preference number: 4 (lower is better)
Translates to: VALESVCHYSAPITRKSHSPKPR*GYAPHC
Trigger: ACAATGAGGTGCATACCCCCAGCGTGGTTTTGGAGA...ATGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR CCA 90 bp ACACCGGCATCATGTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACTCCCATCAAATGACCTaGCTTCATGTTAGGCATCCC +
Preference number: 4 (lower is better)
Translates to: TPASCSTRVCVSLLSTNHSHQMT*LHVRHP
Trigger: GGGATGCCTAACATGAAGCCAGGTCATTTGATGGGA...GTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTACATGATGCCGGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361352.9
ENST00000449321.5
CDS-3UTR CCA 90 bp GTCCTCTTGAAGGAAGGTCAACACCGGCATCATGTAGCACTAGAGTCTGTGTGTTCCCATCAAATGACCTaGCTTCATGTTAGGCATCCC +
Preference number: 4 (lower is better)
Translates to: VLLKEGQHRHHVALESVCSHQMT*LHVRHP
Trigger: GGGATGCCTAACATGAAGCCAGGTCATTTGATGGGA...ACACACAGACTCTAGTGCTACATGATGCCGGTGTTGACCTTCCTTCAAGAGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361352.9
ENST00000449321.5
CDS-3UTR CCA 90 bp GCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACATTTTTATCCTGGCTACTCATaGGGCTCTGCATACTTCCCG +
Preference number: 4 (lower is better)
Translates to: ALESVCHYSAPITRKSHFYPGYS*GSAYFP
Trigger: CGGGAAGTATGCAGAGCCCCATGAGTAGCCAGGATA...AAAATGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR CCA 90 bp CTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACATTTTCTTGAGCCCCTACAAATTTaGGGACTGGGGAAAGGGAGC +
Preference number: 4 (lower is better)
Translates to: LESVCHYSAPITRKSHFLEPLQI*GLGKGS
Trigger: GCTCCCTTTCCCCAGTCCCCAAATTTGTAGGGGCTC...AAGAAAATGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000392744.4
CDS-3UTR CCA 90 bp GCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACATTTTCGCAGACCTCTGACCTaGGCAAGTTCTCTGGTAGAA +
Preference number: 4 (lower is better)
Translates to: ALESVCHYSAPITRKSHFRRPLT*ASSLVE
Trigger: TTCTACCAGAGAACTTGCCCAGGTCAGAGGTCTGCG...AAAATGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392744.4
ENST00000449321.5
CDS-3UTR CCA 90 bp GCAGTGGAAGAAAAGACATGTAGGTTGTACAGGCTAGCAAAGCCCAAGAAGAATTCTGGAGCAAGGACTTaGCAGCAAGGCGGTGAATGG +
Preference number: 4 (lower is better)
Translates to: AVEEKTCRLYRLAKPKKNSGART*QQGGEW
Trigger: CCATTCACCGCCTTGCTGCCAAGTCCTTGCTCCAGA...ATTCTTCTTGGGCTTTGCTAGCCTGTACAACCTACATGTCTTTTCTTCCACTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CCA 90 bp GAAGAAAAGACATGTAGGTTGTACAGGCTAGCAAAGCCCAAGAAGAATGAATCACAACCGAAGGCATGGTaGAGCCTGCATGGGCACGCA +
Preference number: 4 (lower is better)
Translates to: EEKTCRLYRLAKPKKNESQPKAW*SLHGHA
Trigger: TGCGTGCCCATGCAGGCTCCACCATGCCTTCGGTTG...TGATTCATTCTTCTTGGGCTTTGCTAGCCTGTACAACCTACATGTCTTTTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR TCA 90 bp GCATCATGTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAACTCTCCACAGGTATTTaGTGGTTGATCTTCTGGGAT +
Preference number: 4 (lower is better)
Translates to: ASCSTRVCVSLLSTNHPELSTGI*WLIFWD
Trigger: ATCCCAGAAGATCAACCATCAAATACCTGTGGAGAG...TTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTACATGATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361352.9
ENST00000449321.5
CDS-3UTR TCA 90 bp GCAGTGGAAGAAAAGACATGTAGGTTGTACAGGCTAGCAAAGCCCAAGAAGAATGCCTGTATTCGCAGCTaGGATGTATCCTGGCTACTC +
Preference number: 4 (lower is better)
Translates to: AVEEKTCRLYRLAKPKKNACIRS*DVSWLL
Trigger: GAGTAGCCAGGATACATCTCAGCTGCGAATACAGGC...ATTCTTCTTGGGCTTTGCTAGCCTGTACAACCTACATGTCTTTTCTTCCACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR TCA 90 bp TTGAAGGAAGGTCAACACCGGCATCATGTAGCACTAGAGTCTGTGTGTCACTACTCCTCCATTGTTTGCTaGGTGTACTTCACACTCTCC +
Preference number: 4 (lower is better)
Translates to: LKEGQHRHHVALESVCHYSSIVC*VYFTLS
Trigger: GGAGAGTGTGAAGTACACTCAGCAAACAATGGAGGA...GTAGTGACACACAGACTCTAGTGCTACATGATGCCGGTGTTGACCTTCCTTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361352.9
ENST00000449321.5
CDS-3UTR TCA 90 bp TGTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACATCCTCCATTGTTTGCTaGGTGTACTTCACACTCTCC +
Preference number: 4 (lower is better)
Translates to: CSTRVCVSLLSTNHPEITSSIVC*VYFTLS
Trigger: GGAGAGTGTGAAGTACACTCAGCAAACAATGGAGGA...TGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR TCA 90 bp TCTGGGACCACTGTCACTTTTCTGAGGGCATATGTTGGGAAAAGAAAGATCATATTCTACGCAGACCTCTaGCCTGGGCAAGTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: SGTTVTFLRAYVGKRKIIFYADL*PGQVLW
Trigger: CCAGAGAACTTGCCCAGGTCAGAGGTCTGCGTAGAA...TATGATCTTTCTTTTCCCAACATATGCCCTCAGAAAAGTGACAGTGGTCCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456829.7
CDS-3UTR TCA 90 bp TCTGGGACCACTGTCACTTTTCTGAGGGCATATGTTGGGAAAAGAAAGATCATAAGCGTTTCAGAGTCCTaGGAGCCTTGGACTGCATCC +
Preference number: 4 (lower is better)
Translates to: SGTTVTFLRAYVGKRKIISVSES*EPWTAS
Trigger: GGATGCAGTCCAAGGCTCTCAGGACTCTGAAACGCT...TATGATCTTTCTTTTCCCAACATATGCCCTCAGAAAAGTGACAGTGGTCCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR TCA 90 bp TATGAGACACAAGGGTCAGGAACGATTACGGGGAGCTCCTTTCTTCCTAATGCGAGCAGGATCCACAGATaGCTTCAGGAAAGTAATAGC +
Preference number: 4 (lower is better)
Translates to: YETQGSGTITGSSFLPNASRIHR*LQESNS
Trigger: GCTATTACTTTCCTGAAGTCATCTGTGGATCCTGCT...CGCATTAGGAAGAAAGGAGCTCCCCGTAATCGTTCCTGACCCTTGTGTCTCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR GCA 90 bp TCATGTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCAGTAGGCCACAGAAGTaGACCATGGTGATGCAAGAT +
Preference number: 4 (lower is better)
Translates to: SCSTRVCVSLLSTNHPEISRPQK*TMVMQD
Trigger: ATCTTGCATCACCATGGTGCACTTCTGTGGCCTACT...GATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTACATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR GCA 90 bp AGGGTATATGAGACACAAGGGTCAGGAACGATTACGGGGAGCTCCTTTCTTCCTCTTTCTCATAGTTGGTaGGGGCCTTCATCTTGTCTT +
Preference number: 4 (lower is better)
Translates to: RVYETQGSGTITGSSFLPLSHSW*GPSSCL
Trigger: AAGACAAGATGAAGGCCCGCACCAACTATGAGAAAG...AGGAAGAAAGGAGCTCCCCGTAATCGTTCCTGACCCTTGTGTCTCATATACCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR GCA 90 bp GCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACATTTTACCTTCTCAATGCCATaGTGGGAATCTATGGTGGCG +
Preference number: 4 (lower is better)
Translates to: ALESVCHYSAPITRKSHFTFSMP*WESMVA
Trigger: CGCCACCATAGATTCCCAGCATGGCATTGAGAAGGT...AAAATGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR GCA 90 bp AGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACATTTACCTTCTCAATGCCATaGTGGGAATCTATGGTGGCG +
Preference number: 4 (lower is better)
Translates to: STRVCVSLLSTNHPEITFTFSMP*WESMVA
Trigger: CGCCACCATAGATTCCCAGCATGGCATTGAGAAGGT...AAATGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR GCA 90 bp GTATATGAGACACAAGGGTCAGGAACGATTACGGGGAGCTCCTTTCTTCCTAATACCTTCTCAATGCCATaGTGGGAATCTATGGTGGCG +
Preference number: 4 (lower is better)
Translates to: VYETQGSGTITGSSFLPNTFSMP*WESMVA
Trigger: CGCCACCATAGATTCCCAGCATGGCATTGAGAAGGT...ATTAGGAAGAAAGGAGCTCCCCGTAATCGTTCCTGACCCTTGTGTCTCATATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR GCA 90 bp AGGGTATATGAGACACAAGGGTCAGGAACGATTACGGGGAGCTCCTTTCTTCCTATTGGACCTTCTCAATaGCATGCTGGGAATCTATGG +
Preference number: 4 (lower is better)
Translates to: RVYETQGSGTITGSSFLPIGPSQ*HAGNLW
Trigger: CCATAGATTCCCAGCATGGCATTGAGAAGGTCCAAT...AGGAAGAAAGGAGCTCCCCGTAATCGTTCCTGACCCTTGTGTCTCATATACCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR GCA 90 bp GTCCTCTTGAAGGAAGGTCAACACCGGCATCATGTAGCACTAGAGTCTGTGTGTATTGGACCTTCTCAATaGCATGCTGGGAATCTATGG +
Preference number: 4 (lower is better)
Translates to: VLLKEGQHRHHVALESVCIGPSQ*HAGNLW
Trigger: CCATAGATTCCCAGCATGGCATTGAGAAGGTCCAAT...ACACACAGACTCTAGTGCTACATGATGCCGGTGTTGACCTTCCTTCAAGAGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361352.9
ENST00000449321.5
CDS-3UTR GCA 90 bp TCATGTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCCTAAACTGCCAAACTTaGAGGAACCTTCCTGGGGAT +
Preference number: 4 (lower is better)
Translates to: SCSTRVCVSLLSTNHPEILNCQT*RNLPGD
Trigger: ATCCCCAGGAAGGTTCCTGCAAGTTTGGCAGTTTAG...GATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTACATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392744.4
CDS-3UTR GCA 90 bp TGTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACAGAAAACTTGCTATTCTaGACCCTTGCCCCCACTCTT +
Preference number: 4 (lower is better)
Translates to: CSTRVCVSLLSTNHPEITENLLF*TLAPTL
Trigger: AAGAGTGGGGGCAAGGGTGCAGAATAGCAAGTTTTC...TGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392744.4
CDS-3UTR GCA 90 bp CAGGCAGTGGAAGAAAAGACATGTAGGTTGTACAGGCTAGCAAAGCCCAAGAAGAAGCTCGGCAGGCTGTaGAGCCATTATTTCTTCCAA +
Preference number: 4 (lower is better)
Translates to: QAVEEKTCRLYRLAKPKKKLGRL*SHYFFQ
Trigger: TTGGAAGAAATAATGGCTGCACAGCCTGCCGAGCTT...CTTCTTGGGCTTTGCTAGCCTGTACAACCTACATGTCTTTTCTTCCACTGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CCA 90 bp TCATTTGGTCCTCTTGAAGGAAGGTCAACACCGGCATCATGTAGCACTAGAGTCTGGCTTTCTCATAGTTaGTGCGGGCCTTCATCTTGT +
Preference number: 4 (lower is better)
Translates to: SFGPLEGRSTPASCSTRVWLSHS*CGPSSC
Trigger: ACAAGATGAAGGCCCGCACCAACTATGAGAAAGCCA...GACTCTAGTGCTACATGATGCCGGTGTTGACCTTCCTTCAAGAGGACCAAATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361352.9
ENST00000449321.5
CDS-3UTR CCA 90 bp GATCCAGATGTTGGCTTTCAACTTCCCTCTAACTCCTCCTACGCAAGCTTACCATGGCTTTCTCATAGTTaGTGCGGGCCTTCATCTTGT +
Preference number: 4 (lower is better)
Translates to: DPDVGFQLPSNSSYASLPWLSHS*CGPSSC
Trigger: ACAAGATGAAGGCCCGCACCAACTATGAGAAAGCCA...TGGTAAGCTTGCGTAGGAGGAGTTAGAGGGAAGTTGAAAGCCAACATCTGGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CCA 90 bp TGTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACATGGCTTTCTCATAGTTaGTGCGGGCCTTCATCTTGT +
Preference number: 4 (lower is better)
Translates to: CSTRVCVSLLSTNHPEITWLSHS*CGPSSC
Trigger: ACAAGATGAAGGCCCGCACCAACTATGAGAAAGCCA...TGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR CCA 90 bp GGTCAGGATACCATGGGAACAGTGGAGGCATCAGAAAAGCTGGAACAGAAAACATGGCTTTCTCATAGTTaGTGCGGGCCTTCATCTTGT +
Preference number: 4 (lower is better)
Translates to: GQDTMGTVEASEKLEQKTWLSHS*CGPSSC
Trigger: ACAAGATGAAGGCCCGCACCAACTATGAGAAAGCCA...TGTTTTCTGTTCCAGCTTTTCTGATGCCTCCACTGTTCCCATGGTATCCTGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456829.7
CDS-3UTR CCA 90 bp ATTACATTGATCCAGATGTTGGCTTTCAACTTCCCTCTAACTCCTCCTACGCAAGGTGGCCCTGGGAGATaGCTTTCTCATAGTTGGTGC +
Preference number: 4 (lower is better)
Translates to: ITLIQMLAFNFPLTPPTQGGPGR*LSHSWC
Trigger: GCACCAACTATGAGAAAGCCATCTCCCAGGGCCACC...TTGCGTAGGAGGAGTTAGAGGGAAGTTGAAAGCCAACATCTGGATCAATGTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CCA 90 bp TGTTTTTCATGTTGTTTCCCTGGAAACCCTGGGAGGAACATTACTGCCTATGAATCCAATAAGAAGGCCTaGTGGCCCTGGGAGATGGCT +
Preference number: 4 (lower is better)
Translates to: CFSCCFPGNPGRNITAYESNKKA*WPWEMA
Trigger: AGCCATCTCCCAGGGCCACCAGGCCTTCTTATTGGA...TTCATAGGCAGTAATGTTCCTCCCAGGGTTTCCAGGGAAACAACATGAAAAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CCA 90 bp TCATGTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCGACGACCCAGAGAACTaGTATCTAGGATTCAGGACA +
Preference number: 4 (lower is better)
Translates to: SCSTRVCVSLLSTNHPEIDDPEN*YLGFRT
Trigger: TGTCCTGAATCCTAGATACCAGTTCTCTGGGTCGTC...GATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTACATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR CCA 90 bp CAGGCAGTGGAAGAAAAGACATGTAGGTTGTACAGGCTAGCAAAGCCCAAGAAGGACGACCCAGAGAACTaGTATCTAGGATTCAGGACA +
Preference number: 4 (lower is better)
Translates to: QAVEEKTCRLYRLAKPKKDDPEN*YLGFRT
Trigger: TGTCCTGAATCCTAGATACCAGTTCTCTGGGTCGTC...CTTCTTGGGCTTTGCTAGCCTGTACAACCTACATGTCTTTTCTTCCACTGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CCA 90 bp AGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACATTTGACTCAAGGGGCAGTTaGATTGGACCTTCTCAATGC +
Preference number: 4 (lower is better)
Translates to: STRVCVSLLSTNHPEITFDSRGS*IGPSQC
Trigger: GCATTGAGAAGGTCCAATCCAACTGCCCCTTGAGTC...AAATGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR CCA 90 bp CATGTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCATCCCATCAAATGACCTaGCTTCATGTTAGGCATCCC +
Preference number: 4 (lower is better)
Translates to: HVALESVCHYSAPITRKSSHQMT*LHVRHP
Trigger: GGGATGCCTAACATGAAGCCAGGTCATTTGATGGGA...TGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTACATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR CCA 90 bp CATGTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCAAAGGGAGCTAGAATGTaGAGCTCTCAGTCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: HVALESVCHYSAPITRKSKGARM*SSQSSR
Trigger: TCTGGAAGACTGAGAGCTCCACATTCTAGCTCCCTT...TGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTACATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392744.4
CDS-3UTR CCA 90 bp ACCTGGAGCAGAGAAGCGAAGTGGAGTAAGCATCCTTTACTTTTATGGCAAAAATCTGGAGCAAGGACTTaGCAGCAAGGCGGTGAATGG +
Preference number: 4 (lower is better)
Translates to: TWSREAKWSKHPLLLWQKSGART*QQGGEW
Trigger: CCATTCACCGCCTTGCTGCCAAGTCCTTGCTCCAGA...TTTTTGCCATAAAAGTAAAGGATGCTTACTCCACTTCGCTTCTCTGCTCCAGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CCA 90 bp TGTTTTTCATGTTGTTTCCCTGGAAACCCTGGGAGGAACATTACTGCCTATGAATGTCACCTCTCACAGTaGACCCCTGCAGTCTCTGTC +
Preference number: 4 (lower is better)
Translates to: CFSCCFPGNPGRNITAYECHLSQ*TPAVSV
Trigger: GACAGAGACTGCAGGGGTCCACTGTGAGAGGTGACA...TTCATAGGCAGTAATGTTCCTCCCAGGGTTTCCAGGGAAACAACATGAAAAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR TCA 90 bp TCATTTGGTCCTCTTGAAGGAAGGTCAACACCGGCATCATGTAGCACTAGAGTCAGAAGTGCACCATGGTaGTGCAAGATTTCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: SFGPLEGRSTPASCSTRVRSAPW*CKISSS
Trigger: AGAGGAAGAAATCTTGCATCACCATGGTGCACTTCT...GACTCTAGTGCTACATGATGCCGGTGTTGACCTTCCTTCAAGAGGACCAAATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361352.9
CDS-3UTR TCA 90 bp GACCACTGTCACTTTTCTGAGGGCATATGTTGGGAAAAGAAAGATCATATCCAAGCAGCCAGGGAAACCTaGGCAGAAGTCTTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: DHCHFSEGICWEKKDHIQAARET*AEVLSS
Trigger: AGAGGACAAGACTTCTGCTCAGGTTTCCCTGGCTGC...TTGGATATGATCTTTCTTTTCCCAACATATGCCCTCAGAAAAGTGACAGTGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR TCA 90 bp CTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACATTTTCTTGGATCTCCCATCAAATaGCCTGGCTTCATGTTAGGC +
Preference number: 4 (lower is better)
Translates to: LESVCHYSAPITRKSHFLGSPIK*PGFMLG
Trigger: GCCTAACATGAAGCCAGGTCATTTGATGGGAGATCC...AAGAAAATGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR TCA 90 bp TCATGTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCCTCTCCACAGGTATTTaGTGGTTGATCTTCTGGGAT +
Preference number: 4 (lower is better)
Translates to: SCSTRVCVSLLSTNHPEILSTGI*WLIFWD
Trigger: ATCCCAGAAGATCAACCATCAAATACCTGTGGAGAG...GATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTACATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR TCA 90 bp CATCATGTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAAACAGGGAATAGGACATaGTGGAAAAGGGTACAGATG +
Preference number: 4 (lower is better)
Translates to: HHVALESVCHYSAPITRKTGNRT*WKRVQM
Trigger: CATCTGTACCCTTTTCCATCATGTCCTATTCCCTGT...TTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTACATGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361352.9
ENST00000449321.5
CDS-3UTR TCA 90 bp GTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACATACAGGGAATAGGACATaGTGGAAAAGGGTACAGATG +
Preference number: 4 (lower is better)
Translates to: VALESVCHYSAPITRKSHTGNRT*WKRVQM
Trigger: CATCTGTACCCTTTTCCATCATGTCCTATTCCCTGT...ATGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361352.9
ENST00000449321.5
CDS-3UTR TCA 90 bp TGTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACAAGAAGTGCACCATGGTaGTGCAAGATTTCTGCAGAA +
Preference number: 4 (lower is better)
Translates to: CSTRVCVSLLSTNHPEITRSAPW*CKISAE
Trigger: TTCTGCAGAAATCTTGCATCACCATGGTGCACTTCT...TGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392744.4
CDS-3UTR TCA 90 bp GACAGCATATCAAATAGGGTCATTTCCACCAGGATAGGGTATATGAGACACAAGTTGGCAGCAAGGCGGTaGATGGTGAGGTTGACATCA +
Preference number: 4 (lower is better)
Translates to: DSISNRVISTRIGYMRHKLAARR*MVRLTS
Trigger: TGATGTCAACCTCACCATTCACCGCCTTGCTGCCAA...CTTGTGTCTCATATACCCTATCCTGGTGGAAATGACCCTATTTGATATGCTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR TCA 90 bp ATTACATTGATCCAGATGTTGGCTTTCAACTTCCCTCTAACTCCTCCTACGCAATTGGCAGCAAGGCGGTaGATGGTGAGGTTGACATCA +
Preference number: 4 (lower is better)
Translates to: ITLIQMLAFNFPLTPPTQLAARR*MVRLTS
Trigger: TGATGTCAACCTCACCATTCACCGCCTTGCTGCCAA...TTGCGTAGGAGGAGTTAGAGGGAAGTTGAAAGCCAACATCTGGATCAATGTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR TCA 90 bp ACAGTGGACCCCTGCAGTCTCTGTCTTTGTGATCTTGACATTACATTGATCCAGCACCCACTTTCTGAGTaGAAAGTCACCGATGTTCCT +
Preference number: 4 (lower is better)
Translates to: TVDPCSLCLCDLDITLIQHPLSE*KVTDVP
Trigger: AGGAACATCGGTGACTTTTCACTCAGAAAGTGGGTG...CTGGATCAATGTAATGTCAAGATCACAAAGACAGAGACTGCAGGGGTCCACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456829.7
CDS-3UTR TCA 90 bp CAGGCAGTGGAAGAAAAGACATGTAGGTTGTACAGGCTAGCAAAGCCCAAGAAGTTCAATGTGCATGCATaGTACCTGGGAGCCTTGTTA +
Preference number: 4 (lower is better)
Translates to: QAVEEKTCRLYRLAKPKKFNVHA*YLGALL
Trigger: TAACAAGGCTCCCAGGTATCATGCATGCACATTGAA...CTTCTTGGGCTTTGCTAGCCTGTACAACCTACATGTCTTTTCTTCCACTGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456829.7
CDS-3UTR GCA 90 bp GTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACATCTCGTAGTTCAAAGTTaGAGACACACCAGCCACAAA +
Preference number: 4 (lower is better)
Translates to: VALESVCHYSAPITRKSHLVVQS*RHTSHK
Trigger: TTTGTGGCTGGTGTGTCTGCAACTTTGAACTACGAG...ATGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR GCA 90 bp TCATGTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCCTCGTAGTTCAAAGTTaGAGACACACCAGCCACAAA +
Preference number: 4 (lower is better)
Translates to: SCSTRVCVSLLSTNHPEILVVQS*RHTSHK
Trigger: TTTGTGGCTGGTGTGTCTGCAACTTTGAACTACGAG...GATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTACATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR GCA 90 bp GGTCAGGATACCATGGGAACAGTGGAGGCATCAGAAAAGCTGGAACAGAAAACACTCGTAGTTCAAAGTTaGAGACACACCAGCCACAAA +
Preference number: 4 (lower is better)
Translates to: GQDTMGTVEASEKLEQKTLVVQS*RHTSHK
Trigger: TTTGTGGCTGGTGTGTCTGCAACTTTGAACTACGAG...TGTTTTCTGTTCCAGCTTTTCTGATGCCTCCACTGTTCCCATGGTATCCTGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456829.7
CDS-3UTR GCA 90 bp TGTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACACTTTCTCATAGTTGGTaGGGGCCTTCATCTTGTCTT +
Preference number: 4 (lower is better)
Translates to: CSTRVCVSLLSTNHPEITLSHSW*GPSSCL
Trigger: AAGACAAGATGAAGGCCCGCACCAACTATGAGAAAG...TGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR GCA 90 bp TCATTTGGTCCTCTTGAAGGAAGGTCAACACCGGCATCATGTAGCACTAGAGTCCTTTCTCATAGTTGGTaGGGGCCTTCATCTTGTCTT +
Preference number: 4 (lower is better)
Translates to: SFGPLEGRSTPASCSTRVLSHSW*GPSSCL
Trigger: AAGACAAGATGAAGGCCCGCACCAACTATGAGAAAG...GACTCTAGTGCTACATGATGCCGGTGTTGACCTTCCTTCAAGAGGACCAAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361352.9
ENST00000449321.5
CDS-3UTR GCA 90 bp TGTTTTTCATGTTGTTTCCCTGGAAACCCTGGGAGGAACATTACTGCCTATGAAAGACATCCCTGGAGCTaGTGTCCCCCTCCAATAAGA +
Preference number: 4 (lower is better)
Translates to: CFSCCFPGNPGRNITAYERHPWS*CPPPIR
Trigger: TCTTATTGGAGGGGGACAGCAGCTCCAGGGATGTCT...TTCATAGGCAGTAATGTTCCTCCCAGGGTTTCCAGGGAAACAACATGAAAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR GCA 90 bp GAAGAAAAGACATGTAGGTTGTACAGGCTAGCAAAGCCCAAGAAGAATGAATCAATACTTCAGGGTGACTaGCGCCTTCGACCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: EEKTCRLYRLAKPKKNESILQGD*RLRPRL
Trigger: CAACCTGGGTCGAAGGCGGCAGTCACCCTGAAGTAT...TGATTCATTCTTCTTGGGCTTTGCTAGCCTGTACAACCTACATGTCTTTTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR GCA 90 bp GCAGTGGAAGAAAAGACATGTAGGTTGTACAGGCTAGCAAAGCCCAAGAAGAATACCTTCTCAATGCCATaGTGGGAATCTATGGTGGCG +
Preference number: 4 (lower is better)
Translates to: AVEEKTCRLYRLAKPKKNTFSMP*WESMVA
Trigger: CGCCACCATAGATTCCCAGCATGGCATTGAGAAGGT...ATTCTTCTTGGGCTTTGCTAGCCTGTACAACCTACATGTCTTTTCTTCCACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR GCA 90 bp GTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACATATTGGACCTTCTCAATaGCATGCTGGGAATCTATGG +
Preference number: 4 (lower is better)
Translates to: VALESVCHYSAPITRKSHIGPSQ*HAGNLW
Trigger: CCATAGATTCCCAGCATGGCATTGAGAAGGTCCAAT...ATGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR GCA 90 bp GGTCAGGATACCATGGGAACAGTGGAGGCATCAGAAAAGCTGGAACAGAAAACAATTGGACCTTCTCAATaGCATGCTGGGAATCTATGG +
Preference number: 4 (lower is better)
Translates to: GQDTMGTVEASEKLEQKTIGPSQ*HAGNLW
Trigger: CCATAGATTCCCAGCATGGCATTGAGAAGGTCCAAT...TGTTTTCTGTTCCAGCTTTTCTGATGCCTCCACTGTTCCCATGGTATCCTGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456829.7
CDS-3UTR GCA 90 bp GCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACATTTTACTCTCCGGAAAGCATaGCTCATAGGAAGAGCCAAA +
Preference number: 4 (lower is better)
Translates to: ALESVCHYSAPITRKSHFTLRKA*LIGRAK
Trigger: TTTGGCTCTTCCTATGAGGCATGCTTTCCGGAGAGT...AAAATGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR GCA 90 bp AGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACATTTACTCTCCGGAAAGCATaGCTCATAGGAAGAGCCAAA +
Preference number: 4 (lower is better)
Translates to: STRVCVSLLSTNHPEITFTLRKA*LIGRAK
Trigger: TTTGGCTCTTCCTATGAGGCATGCTTTCCGGAGAGT...AAATGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR GCA 90 bp ACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACATTTTCTCCGTTGAGGAAAACTTaGTATTCTGCACCCTTGCCC +
Preference number: 4 (lower is better)
Translates to: TRVCVSLLSTNHPEITFSPLRKT*YSAPLP
Trigger: GGGCAAGGGTGCAGAATAGCAAGTTTTCCTCAACGG...AGAAAATGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392744.4
CDS-3UTR GCA 90 bp ATTACATTGATCCAGATGTTGGCTTTCAACTTCCCTCTAACTCCTCCTACGCAACTGAGAGCCTTGGACTaGATCCTGTCTTTGCCTGTG +
Preference number: 4 (lower is better)
Translates to: ITLIQMLAFNFPLTPPTQLRALD*ILSLPV
Trigger: CACAGGCAAAGACAGGATGCAGTCCAAGGCTCTCAG...TTGCGTAGGAGGAGTTAGAGGGAAGTTGAAAGCCAACATCTGGATCAATGTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR GCA 90 bp TCTGGGACCACTGTCACTTTTCTGAGGGCATATGTTGGGAAAAGAAAGATCATACTGAGAGCCTTGGACTaGATCCTGTCTTTGCCTGTG +
Preference number: 4 (lower is better)
Translates to: SGTTVTFLRAYVGKRKIILRALD*ILSLPV
Trigger: CACAGGCAAAGACAGGATGCAGTCCAAGGCTCTCAG...TATGATCTTTCTTTTCCCAACATATGCCCTCAGAAAAGTGACAGTGGTCCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR GCA 90 bp GACAGCATATCAAATAGGGTCATTTCCACCAGGATAGGGTATATGAGACACAAGTCCTCTACCACAGGCTaGAGAGAGCGTTTCAGAGTC +
Preference number: 4 (lower is better)
Translates to: DSISNRVISTRIGYMRHKSSTTG*RERFRV
Trigger: GACTCTGAAACGCTCTCTGCAGCCTGTGGTAGAGGA...CTTGTGTCTCATATACCCTATCCTGGTGGAAATGACCCTATTTGATATGCTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR GCA 90 bp GACCACTGTCACTTTTCTGAGGGCATATGTTGGGAAAAGAAAGATCATATCCAATTCTCCTGTTGTCTCTaGTGCTGGCATCCTCCCGGT +
Preference number: 4 (lower is better)
Translates to: DHCHFSEGICWEKKDHIQFSCCL*CWHPPG
Trigger: ACCGGGAGGATGCCAGCAGCAGAGACAACAGGAGAA...TTGGATATGATCTTTCTTTTCCCAACATATGCCCTCAGAAAAGTGACAGTGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR GCA 90 bp ATTACATTGATCCAGATGTTGGCTTTCAACTTCCCTCTAACTCCTCCTACGCAACACCCTTCCCTTTACTaGACTAGATCAGGGCCTGAC +
Preference number: 4 (lower is better)
Translates to: ITLIQMLAFNFPLTPPTQHPSLY*TRSGPD
Trigger: GTCAGGCCCTGATCTAGTGCAGTAAAGGGAAGGGTG...TTGCGTAGGAGGAGTTAGAGGGAAGTTGAAAGCCAACATCTGGATCAATGTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CCA 90 bp GCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACATTTTCAGAGTCTTCATCCATaGGGAACACAAAGAAGGCCT +
Preference number: 4 (lower is better)
Translates to: ALESVCHYSAPITRKSHFQSLHP*GTQRRP
Trigger: AGGCCTTCTTTGTGTTCCCCATGGATGAAGACTCTG...AAAATGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR CCA 90 bp AGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACATTTTGGCTTTCTCATAGTTaGTGCGGGCCTTCATCTTGT +
Preference number: 4 (lower is better)
Translates to: STRVCVSLLSTNHPEITFWLSHS*CGPSSC
Trigger: ACAAGATGAAGGCCCGCACCAACTATGAGAAAGCCA...AAATGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR CCA 90 bp ATTACATTGATCCAGATGTTGGCTTTCAACTTCCCTCTAACTCCTCCTACGCAAGCCTTCGACCCAGGTTaGAGGTTACCCACATTGCAA +
Preference number: 4 (lower is better)
Translates to: ITLIQMLAFNFPLTPPTQAFDPG*RLPTLQ
Trigger: TTGCAATGTGGGTAACCTCCAACCTGGGTCGAAGGC...TTGCGTAGGAGGAGTTAGAGGGAAGTTGAAAGCCAACATCTGGATCAATGTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CCA 90 bp CTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACATTTTCTTAAGGGGCAGTTGGATTaGACCTTCTCAATGCCATGC +
Preference number: 4 (lower is better)
Translates to: LESVCHYSAPITRKSHFLKGQLD*TFSMPC
Trigger: GCATGGCATTGAGAAGGTCCAATCCAACTGCCCCTT...AAGAAAATGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR CCA 90 bp CATCATGTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAAACTCACCATTGCAGATaGATCTCCCATCAAATGACC +
Preference number: 4 (lower is better)
Translates to: HHVALESVCHYSAPITRKTHHCR*ISHQMT
Trigger: GGTCATTTGATGGGAGATCCATCTGCAATGGTGAGT...TTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTACATGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR CCA 90 bp CATGTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCAACTCACCATTGCAGATaGATCTCCCATCAAATGACC +
Preference number: 4 (lower is better)
Translates to: HVALESVCHYSAPITRKSTHHCR*ISHQMT
Trigger: GGTCATTTGATGGGAGATCCATCTGCAATGGTGAGT...TGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTACATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR CCA 90 bp TCATGTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACTCACCATTGCAGATaGATCTCCCATCAAATGACC +
Preference number: 4 (lower is better)
Translates to: SCSTRVCVSLLSTNHPEITHHCR*ISHQMT
Trigger: GGTCATTTGATGGGAGATCCATCTGCAATGGTGAGT...GATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTACATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR CCA 90 bp CATGTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCAAAATCAGTGTTTCCTTaGCTGCCTGTATTCGCAGCT +
Preference number: 4 (lower is better)
Translates to: HVALESVCHYSAPITRKSKSVFP*LPVFAA
Trigger: AGCTGCGAATACAGGCAGCCAAGGAAACACTGATTT...TGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTACATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR CCA 90 bp CATCATGTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAAAAATCAGTGTTTCCTTaGCTGCCTGTATTCGCAGCT +
Preference number: 4 (lower is better)
Translates to: HHVALESVCHYSAPITRKKSVFP*LPVFAA
Trigger: AGCTGCGAATACAGGCAGCCAAGGAAACACTGATTT...TTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTACATGATG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR CCA 90 bp TGTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACAAAATCAGTGTTTCCTTaGCTGCCTGTATTCGCAGCT +
Preference number: 4 (lower is better)
Translates to: CSTRVCVSLLSTNHPEITKSVFP*LPVFAA
Trigger: AGCTGCGAATACAGGCAGCCAAGGAAACACTGATTT...TGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR CCA 90 bp TCATGTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCGTAAATGTTCTGGAGTaGTGCCAAGATTTCAGTGCC +
Preference number: 4 (lower is better)
Translates to: SCSTRVCVSLLSTNHPEIVNVLE*CQDFSA
Trigger: GGCACTGAAATCTTGGCACCACTCCAGAACATTTAC...GATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTACATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR CCA 90 bp CATCATGTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAAGTAAATGTTCTGGAGTaGTGCCAAGATTTCAGTGCC +
Preference number: 4 (lower is better)
Translates to: HHVALESVCHYSAPITRKVNVLE*CQDFSA
Trigger: GGCACTGAAATCTTGGCACCACTCCAGAACATTTAC...TTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTACATGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR CCA 90 bp CATGTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCATACAAATTTGGGGACTaGGGAAAGGGAGCTAGAATG +
Preference number: 4 (lower is better)
Translates to: HVALESVCHYSAPITRKSYKFGD*GKGARM
Trigger: CATTCTAGCTCCCTTTCCCCAGTCCCCAAATTTGTA...TGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTACATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392744.4
CDS-3UTR CCA 90 bp ACCTGGAGCAGAGAAGCGAAGTGGAGTAAGCATCCTTTACTTTTATGGCAAAAACAACAGAATTGGCCTTaGGACGTCCCTATGAGCCAG +
Preference number: 4 (lower is better)
Translates to: TWSREAKWSKHPLLLWQKQQNWP*DVPMSQ
Trigger: CTGGCTCATAGGGACGTCCCAAGGCCAATTCTGTTG...TTTTTGCCATAAAAGTAAAGGATGCTTACTCCACTTCGCTTCTCTGCTCCAGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CCA 90 bp ATTAAAGAGGAACATCTCTCTCCAACAGTTATAGTTCAACCCAAGTCTTTCAGGAGATCACGGCCAGGATaGTGGCCCAGCCTGAGGAAT +
Preference number: 4 (lower is better)
Translates to: IKEEHLSPTVIVQPKSFRRSRPG*WPSLRN
Trigger: ATTCCTCAGGCTGGGCCACCATCCTGGCCGTGATCT...CCTGAAAGACTTGGGTTGAACTATAACTGTTGGAGAGAGATGTTCCTCTTTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CCA 90 bp AGTCTCTGTCTTTGTGATCTTGACATTACATTGATCCAGATGTTGGCTTTCAACTCACAACCGAAGGCATaGTGGAGCCTGCATGGGCAC +
Preference number: 4 (lower is better)
Translates to: SLCLCDLDITLIQMLAFNSQPKA*WSLHGH
Trigger: GTGCCCATGCAGGCTCCACCATGCCTTCGGTTGTGA...GTTGAAAGCCAACATCTGGATCAATGTAATGTCAAGATCACAAAGACAGAGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CCA 90 bp AGGGTATATGAGACACAAGGGTCAGGAACGATTACGGGGAGCTCCTTTCTTCCTAGCAGAGAAGCGAAGTaGAGTAAGCATCCTTTACTT +
Preference number: 4 (lower is better)
Translates to: RVYETQGSGTITGSSFLPSREAK*SKHPLL
Trigger: AAGTAAAGGATGCTTACTCCACTTCGCTTCTCTGCT...AGGAAGAAAGGAGCTCCCCGTAATCGTTCCTGACCCTTGTGTCTCATATACCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR TCA 90 bp TGTTTTTCATGTTGTTTCCCTGGAAACCCTGGGAGGAACATTACTGCCTATGAAGGATCTCCCATCAAATaGCCTGGCTTCATGTTAGGC +
Preference number: 4 (lower is better)
Translates to: CFSCCFPGNPGRNITAYEGSPIK*PGFMLG
Trigger: GCCTAACATGAAGCCAGGTCATTTGATGGGAGATCC...TTCATAGGCAGTAATGTTCCTCCCAGGGTTTCCAGGGAAACAACATGAAAAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR TCA 90 bp ACCTGGAGCAGAGAAGCGAAGTGGAGTAAGCATCCTTTACTTTTATGGCAAAAAGGATCTCCCATCAAATaGCCTGGCTTCATGTTAGGC +
Preference number: 4 (lower is better)
Translates to: TWSREAKWSKHPLLLWQKGSPIK*PGFMLG
Trigger: GCCTAACATGAAGCCAGGTCATTTGATGGGAGATCC...TTTTTGCCATAAAAGTAAAGGATGCTTACTCCACTTCGCTTCTCTGCTCCAGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR TCA 90 bp GCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACATTTTCTCTCCACAGGTATTTaGTGGTTGATCTTCTGGGAT +
Preference number: 4 (lower is better)
Translates to: ALESVCHYSAPITRKSHFLSTGI*WLIFWD
Trigger: ATCCCAGAAGATCAACCATCAAATACCTGTGGAGAG...AAAATGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR TCA 90 bp TCATGTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCGAACAAATCCTCCGTTaGGGAAAACTTGCTATTCTG +
Preference number: 4 (lower is better)
Translates to: SCSTRVCVSLLSTNHPEIEQILR*GKLAIL
Trigger: CAGAATAGCAAGTTTTCCTCAACGGAGGATTTGTTC...GATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTACATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392744.4
CDS-3UTR GCA 90 bp TCATTTGGTCCTCTTGAAGGAAGGTCAACACCGGCATCATGTAGCACTAGAGTCCGGAGTGAAAACAGCTaGAGTCATAATTTCCGGAAA +
Preference number: 4 (lower is better)
Translates to: SFGPLEGRSTPASCSTRVRSENS*SHNFRK
Trigger: TTTCCGGAAATTATGACTGCAGCTGTTTTCACTCCG...GACTCTAGTGCTACATGATGCCGGTGTTGACCTTCCTTCAAGAGGACCAAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361352.9
ENST00000449321.5
CDS-3UTR GCA 90 bp ACAGTGGACCCCTGCAGTCTCTGTCTTTGTGATCTTGACATTACATTGATCCAGCTTTCTCATAGTTGGTaGGGGCCTTCATCTTGTCTT +
Preference number: 4 (lower is better)
Translates to: TVDPCSLCLCDLDITLIQLSHSW*GPSSCL
Trigger: AAGACAAGATGAAGGCCCGCACCAACTATGAGAAAG...CTGGATCAATGTAATGTCAAGATCACAAAGACAGAGACTGCAGGGGTCCACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR GCA 90 bp GACAGCATATCAAATAGGGTCATTTCCACCAGGATAGGGTATATGAGACACAAGGGAGGTTACCCACATTaGAAGAGAAGACATCCCTGG +
Preference number: 4 (lower is better)
Translates to: DSISNRVISTRIGYMRHKGGYPH*KRRHPW
Trigger: CCAGGGATGTCTTCTCTTGCAATGTGGGTAACCTCC...CTTGTGTCTCATATACCCTATCCTGGTGGAAATGACCCTATTTGATATGCTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR GCA 90 bp TCTCTCTCCAACAGTTATAGTTCAACCCAAGTCTTTCAGGCAGTGGAAGAAAAGGGAGGTTACCCACATTaGAAGAGAAGACATCCCTGG +
Preference number: 4 (lower is better)
Translates to: SLSNSYSSTQVFQAVEEKGGYPH*KRRHPW
Trigger: CCAGGGATGTCTTCTCTTGCAATGTGGGTAACCTCC...CTTTTCTTCCACTGCCTGAAAGACTTGGGTTGAACTATAACTGTTGGAGAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR GCA 90 bp GAAGAAAAGACATGTAGGTTGTACAGGCTAGCAAAGCCCAAGAAGAATGAATCATCCAGAGGCAGCTCCTaGACATACTTCAGGGTGACT +
Preference number: 4 (lower is better)
Translates to: EEKTCRLYRLAKPKKNESSRGSS*TYFRVT
Trigger: AGTCACCCTGAAGTATGTGCAGGAGCTGCCTCTGGA...TGATTCATTCTTCTTGGGCTTTGCTAGCCTGTACAACCTACATGTCTTTTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR GCA 90 bp TATGAGACACAAGGGTCAGGAACGATTACGGGGAGCTCCTTTCTTCCTAATGCGATAGAAACTCACCATTaGAGATGGATCTCCCATCAA +
Preference number: 4 (lower is better)
Translates to: YETQGSGTITGSSFLPNAIETHH*RWISHQ
Trigger: TTGATGGGAGATCCATCTGCAATGGTGAGTTTCTAT...CGCATTAGGAAGAAAGGAGCTCCCCGTAATCGTTCCTGACCCTTGTGTCTCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR GCA 90 bp GCATCATGTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATAGAAACTCACCATTaGAGATGGATCTCCCATCAA +
Preference number: 4 (lower is better)
Translates to: ASCSTRVCVSLLSTNHPEIETHH*RWISHQ
Trigger: TTGATGGGAGATCCATCTGCAATGGTGAGTTTCTAT...TTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTACATGATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361352.9
ENST00000449321.5
CDS-3UTR GCA 90 bp CTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACATTTTCTTACTCTCCGGAAAGCATaGCTCATAGGAAGAGCCAAA +
Preference number: 4 (lower is better)
Translates to: LESVCHYSAPITRKSHFLTLRKA*LIGRAK
Trigger: TTTGGCTCTTCCTATGAGGCATGCTTTCCGGAGAGT...AAGAAAATGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR GCA 90 bp GACAGCATATCAAATAGGGTCATTTCCACCAGGATAGGGTATATGAGACACAAGAATGTTCTGGAGTGGTaGCAAGATTTCAGTGCCCCC +
Preference number: 4 (lower is better)
Translates to: DSISNRVISTRIGYMRHKNVLEW*QDFSAP
Trigger: GGGGGCACTGAAATCTTGGCACCACTCCAGAACATT...CTTGTGTCTCATATACCCTATCCTGGTGGAAATGACCCTATTTGATATGCTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CCA 90 bp CTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACATTTTCTTCAGAGTCTTCATCCATaGGGAACACAAAGAAGGCCT +
Preference number: 4 (lower is better)
Translates to: LESVCHYSAPITRKSHFLQSLHP*GTQRRP
Trigger: AGGCCTTCTTTGTGTTCCCCATGGATGAAGACTCTG...AAGAAAATGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR CCA 90 bp ACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACATTTTCTCAGAGTCTTCATCCATaGGGAACACAAAGAAGGCCT +
Preference number: 4 (lower is better)
Translates to: TRVCVSLLSTNHPEITFSQSLHP*GTQRRP
Trigger: AGGCCTTCTTTGTGTTCCCCATGGATGAAGACTCTG...AGAAAATGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR CCA 90 bp CAAGTTATTTTAAGGGACAGCATATCAAATAGGGTCATTTCCACCAGGATAGGGAATAAGAAGGCCTGGTaGCCCTGGGAGATGGCTTTC +
Preference number: 4 (lower is better)
Translates to: QVILRDSISNRVISTRIGNKKAW*PWEMAF
Trigger: GAAAGCCATCTCCCAGGGCCACCAGGCCTTCTTATT...CCCTATCCTGGTGGAAATGACCCTATTTGATATGCTGTCCCTTAAAATAACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CCA 90 bp GACCACTGTCACTTTTCTGAGGGCATATGTTGGGAAAAGAAAGATCATATCCAAGCCTTCGACCCAGGTTaGAGGTTACCCACATTGCAA +
Preference number: 4 (lower is better)
Translates to: DHCHFSEGICWEKKDHIQAFDPG*RLPTLQ
Trigger: TTGCAATGTGGGTAACCTCCAACCTGGGTCGAAGGC...TTGGATATGATCTTTCTTTTCCCAACATATGCCCTCAGAAAAGTGACAGTGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CCA 90 bp TGTTTTTCATGTTGTTTCCCTGGAAACCCTGGGAGGAACATTACTGCCTATGAATTCTCAATGCCATGCTaGGAATCTATGGTGGCGACC +
Preference number: 4 (lower is better)
Translates to: CFSCCFPGNPGRNITAYEFSMPC*ESMVAT
Trigger: GGTCGCCACCATAGATTCCCAGCATGGCATTGAGAA...TTCATAGGCAGTAATGTTCCTCCCAGGGTTTCCAGGGAAACAACATGAAAAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CCA 90 bp ATTACATTGATCCAGATGTTGGCTTTCAACTTCCCTCTAACTCCTCCTACGCAAAAGGGGCAGTTGGATTaGACCTTCTCAATGCCATGC +
Preference number: 4 (lower is better)
Translates to: ITLIQMLAFNFPLTPPTQKGQLD*TFSMPC
Trigger: GCATGGCATTGAGAAGGTCCAATCCAACTGCCCCTT...TTGCGTAGGAGGAGTTAGAGGGAAGTTGAAAGCCAACATCTGGATCAATGTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CCA 90 bp TGTTTTTCATGTTGTTTCCCTGGAAACCCTGGGAGGAACATTACTGCCTATGAAGACTCAAGGGGCAGTTaGATTGGACCTTCTCAATGC +
Preference number: 4 (lower is better)
Translates to: CFSCCFPGNPGRNITAYEDSRGS*IGPSQC
Trigger: GCATTGAGAAGGTCCAATCCAACTGCCCCTTGAGTC...TTCATAGGCAGTAATGTTCCTCCCAGGGTTTCCAGGGAAACAACATGAAAAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CCA 90 bp GAGTCCACTATGCAAGTCACACAAGTCTTCCTAATACCAGGTAACTCAACAACTGACTCAAGGGGCAGTTaGATTGGACCTTCTCAATGC +
Preference number: 4 (lower is better)
Translates to: ESTMQVTQVFLIPGNSTTDSRGS*IGPSQC
Trigger: GCATTGAGAAGGTCCAATCCAACTGCCCCTTGAGTC...AGTTGTTGAGTTACCTGGTATTAGGAAGACTTGTGTGACTTGCATAGTGGACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456829.7
CDS-3UTR CCA 90 bp ATTACATTGATCCAGATGTTGGCTTTCAACTTCCCTCTAACTCCTCCTACGCAATCTCCAAAACCACGCTaGGGGTATGCACCTCATTGT +
Preference number: 4 (lower is better)
Translates to: ITLIQMLAFNFPLTPPTQSPKPR*GYAPHC
Trigger: ACAATGAGGTGCATACCCCCAGCGTGGTTTTGGAGA...TTGCGTAGGAGGAGTTAGAGGGAAGTTGAAAGCCAACATCTGGATCAATGTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CCA 90 bp GACCACTGTCACTTTTCTGAGGGCATATGTTGGGAAAAGAAAGATCATATCCAATATCCTGGCTACTCATaGGGCTCTGCATACTTCCCG +
Preference number: 4 (lower is better)
Translates to: DHCHFSEGICWEKKDHIQYPGYS*GSAYFP
Trigger: CGGGAAGTATGCAGAGCCCCATGAGTAGCCAGGATA...TTGGATATGATCTTTCTTTTCCCAACATATGCCCTCAGAAAAGTGACAGTGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CCA 90 bp ACAGTGGACCCCTGCAGTCTCTGTCTTTGTGATCTTGACATTACATTGATCCAGAAATCAGTGTTTCCTTaGCTGCCTGTATTCGCAGCT +
Preference number: 4 (lower is better)
Translates to: TVDPCSLCLCDLDITLIQKSVFP*LPVFAA
Trigger: AGCTGCGAATACAGGCAGCCAAGGAAACACTGATTT...CTGGATCAATGTAATGTCAAGATCACAAAGACAGAGACTGCAGGGGTCCACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CCA 90 bp CTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACATTTTCTTTTGCAGGAACCTTCCTaGGGATCATACATCAGGATG +
Preference number: 4 (lower is better)
Translates to: LESVCHYSAPITRKSHFLLQEPS*GSYIRM
Trigger: CATCCTGATGTATGATCCCCAGGAAGGTTCCTGCAA...AAGAAAATGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392744.4
CDS-3UTR CCA 90 bp CATGTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACTTGAGATTAGGAGATaGCTAAATCCCTCCTTCAAC +
Preference number: 4 (lower is better)
Translates to: HVALESVCHYSAPITRKSLEIRR*LNPSFN
Trigger: GTTGAAGGAGGGATTTAGCCATCTCCTAATCTCAAG...TGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTACATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392744.4
CDS-3UTR CCA 90 bp GCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACATTTTTTCTGTCTCTCAGGATaGCACTTCAGAAAGGCAACT +
Preference number: 4 (lower is better)
Translates to: ALESVCHYSAPITRKSHFFCLSG*HFRKAT
Trigger: AGTTGCCTTTCTGAAGTGCCATCCTGAGAGACAGAA...AAAATGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000392744.4
CDS-3UTR CCA 90 bp GAAGAAAAGACATGTAGGTTGTACAGGCTAGCAAAGCCCAAGAAGAATGAATCACAACAGAATTGGCCTTaGGACGTCCCTATGAGCCAG +
Preference number: 4 (lower is better)
Translates to: EEKTCRLYRLAKPKKNESQQNWP*DVPMSQ
Trigger: CTGGCTCATAGGGACGTCCCAAGGCCAATTCTGTTG...TGATTCATTCTTCTTGGGCTTTGCTAGCCTGTACAACCTACATGTCTTTTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CCA 90 bp GACCACTGTCACTTTTCTGAGGGCATATGTTGGGAAAAGAAAGATCATATCCAAAGCACCCAACAGAATTaGCCTTGGGACGTCCCTATG +
Preference number: 4 (lower is better)
Translates to: DHCHFSEGICWEKKDHIQSTQQN*PWDVPM
Trigger: CATAGGGACGTCCCAAGGCCAATTCTGTTGGGTGCT...TTGGATATGATCTTTCTTTTCCCAACATATGCCCTCAGAAAAGTGACAGTGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CCA 90 bp CAGGCAGTGGAAGAAAAGACATGTAGGTTGTACAGGCTAGCAAAGCCCAAGAAGAAAGGGAATAGGTTCTaGGACCACTGTCACTTTTCT +
Preference number: 4 (lower is better)
Translates to: QAVEEKTCRLYRLAKPKKKGNRF*DHCHFS
Trigger: AGAAAAGTGACAGTGGTCCCAGAACCTATTCCCTTT...CTTCTTGGGCTTTGCTAGCCTGTACAACCTACATGTCTTTTCTTCCACTGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CCA 90 bp GTATATGAGACACAAGGGTCAGGAACGATTACGGGGAGCTCCTTTCTTCCTAATTTCATGTTGTTTCCCTaGAAACCCTGGGAGGAACAT +
Preference number: 4 (lower is better)
Translates to: VYETQGSGTITGSSFLPNFMLFP*KPWEEH
Trigger: ATGTTCCTCCCAGGGTTTCCAGGGAAACAACATGAA...ATTAGGAAGAAAGGAGCTCCCCGTAATCGTTCCTGACCCTTGTGTCTCATATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR TCA 90 bp GTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACATCAGGTATTTGATGGTTaGTCTTCTGGGATATTTGGA +
Preference number: 4 (lower is better)
Translates to: VALESVCHYSAPITRKSHQVFDG*SSGIFG
Trigger: TCCAAATATCCCAGAAGATCAACCATCAAATACCTG...ATGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR TCA 90 bp TCATGTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCCAGGTATTTGATGGTTaGTCTTCTGGGATATTTGGA +
Preference number: 4 (lower is better)
Translates to: SCSTRVCVSLLSTNHPEIQVFDG*SSGIFG
Trigger: TCCAAATATCCCAGAAGATCAACCATCAAATACCTG...GATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTACATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR TCA 90 bp TTGAAGGAAGGTCAACACCGGCATCATGTAGCACTAGAGTCTGTGTGTCACTACCAGGTATTTGATGGTTaGTCTTCTGGGATATTTGGA +
Preference number: 4 (lower is better)
Translates to: LKEGQHRHHVALESVCHYQVFDG*SSGIFG
Trigger: TCCAAATATCCCAGAAGATCAACCATCAAATACCTG...GTAGTGACACACAGACTCTAGTGCTACATGATGCCGGTGTTGACCTTCCTTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361352.9
ENST00000449321.5
CDS-3UTR TCA 90 bp GCAGTGGAAGAAAAGACATGTAGGTTGTACAGGCTAGCAAAGCCCAAGAAGAATCCTGGAGTGTATATTTaGGGCATACTTCTCCTGTTG +
Preference number: 4 (lower is better)
Translates to: AVEEKTCRLYRLAKPKKNPGVYI*GILLLL
Trigger: CAACAGGAGAAGTATGCCTCAAATATACACTCCAGG...ATTCTTCTTGGGCTTTGCTAGCCTGTACAACCTACATGTCTTTTCTTCCACTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR TCA 90 bp AGGGTATATGAGACACAAGGGTCAGGAACGATTACGGGGAGCTCCTTTCTTCCTATCTTGACATTACATTaGTCCAGATGTTGGCTTTCA +
Preference number: 4 (lower is better)
Translates to: RVYETQGSGTITGSSFLPILTLH*SRCWLS
Trigger: TGAAAGCCAACATCTGGATCAATGTAATGTCAAGAT...AGGAAGAAAGGAGCTCCCCGTAATCGTTCCTGACCCTTGTGTCTCATATACCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR TCA 90 bp TCTGGGACCACTGTCACTTTTCTGAGGGCATATGTTGGGAAAAGAAAGATCATAAAAGCCCAAGAAGAATaGATCAGGAAGGTCCCCAAC +
Preference number: 4 (lower is better)
Translates to: SGTTVTFLRAYVGKRKIIKAQEE*IRKVPN
Trigger: GTTGGGGACCTTCCTGATTCATTCTTCTTGGGCTTT...TATGATCTTTCTTTTCCCAACATATGCCCTCAGAAAAGTGACAGTGGTCCCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR GCA 90 bp AGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACATTTCGGAGTGAAAACAGCTaGAGTCATAATTTCCGGAAA +
Preference number: 4 (lower is better)
Translates to: STRVCVSLLSTNHPEITFRSENS*SHNFRK
Trigger: TTTCCGGAAATTATGACTGCAGCTGTTTTCACTCCG...AAATGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361352.9
ENST00000449321.5
CDS-3UTR GCA 90 bp ACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACATTTTCTCTCGTAGTTCAAAGTTaGAGACACACCAGCCACAAA +
Preference number: 4 (lower is better)
Translates to: TRVCVSLLSTNHPEITFSLVVQS*RHTSHK
Trigger: TTTGTGGCTGGTGTGTCTGCAACTTTGAACTACGAG...AGAAAATGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR GCA 90 bp CTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACATTTTCTTCTTTCTCATAGTTGGTaGGGGCCTTCATCTTGTCTT +
Preference number: 4 (lower is better)
Translates to: LESVCHYSAPITRKSHFLLSHSW*GPSSCL
Trigger: AAGACAAGATGAAGGCCCGCACCAACTATGAGAAAG...AAGAAAATGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR GCA 90 bp CTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACATTTTCTTATTGGACCTTCTCAATaGCATGCTGGGAATCTATGG +
Preference number: 4 (lower is better)
Translates to: LESVCHYSAPITRKSHFLIGPSQ*HAGNLW
Trigger: CCATAGATTCCCAGCATGGCATTGAGAAGGTCCAAT...AAGAAAATGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR GCA 90 bp GTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACATATAGAAACTCACCATTaGAGATGGATCTCCCATCAA +
Preference number: 4 (lower is better)
Translates to: VALESVCHYSAPITRKSHIETHH*RWISHQ
Trigger: TTGATGGGAGATCCATCTGCAATGGTGAGTTTCTAT...ATGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR GCA 90 bp CAAGTTATTTTAAGGGACAGCATATCAAATAGGGTCATTTCCACCAGGATAGGGCAGTGTTTCCTTGGCTaGCTGTATTCGCAGCTGAGA +
Preference number: 4 (lower is better)
Translates to: QVILRDSISNRVISTRIGQCFLG*LYSQLR
Trigger: TCTCAGCTGCGAATACAGGCAGCCAAGGAAACACTG...CCCTATCCTGGTGGAAATGACCCTATTTGATATGCTGTCCCTTAAAATAACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR GCA 90 bp GACCACTGTCACTTTTCTGAGGGCATATGTTGGGAAAAGAAAGATCATATCCAACAGTGTTTCCTTGGCTaGCTGTATTCGCAGCTGAGA +
Preference number: 4 (lower is better)
Translates to: DHCHFSEGICWEKKDHIQQCFLG*LYSQLR
Trigger: TCTCAGCTGCGAATACAGGCAGCCAAGGAAACACTG...TTGGATATGATCTTTCTTTTCCCAACATATGCCCTCAGAAAAGTGACAGTGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR GCA 90 bp GACAGCATATCAAATAGGGTCATTTCCACCAGGATAGGGTATATGAGACACAAGACTCTCCGGAAAGCATaGCTCATAGGAAGAGCCAAA +
Preference number: 4 (lower is better)
Translates to: DSISNRVISTRIGYMRHKTLRKA*LIGRAK
Trigger: TTTGGCTCTTCCTATGAGGCATGCTTTCCGGAGAGT...CTTGTGTCTCATATACCCTATCCTGGTGGAAATGACCCTATTTGATATGCTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR GCA 90 bp TGTTTTTCATGTTGTTTCCCTGGAAACCCTGGGAGGAACATTACTGCCTATGAAACTCTCCGGAAAGCATaGCTCATAGGAAGAGCCAAA +
Preference number: 4 (lower is better)
Translates to: CFSCCFPGNPGRNITAYETLRKA*LIGRAK
Trigger: TTTGGCTCTTCCTATGAGGCATGCTTTCCGGAGAGT...TTCATAGGCAGTAATGTTCCTCCCAGGGTTTCCAGGGAAACAACATGAAAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR GCA 90 bp CATCATGTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAAATTTACAGAAGAGACTaGGTCGGTCTCTTACATTTC +
Preference number: 4 (lower is better)
Translates to: HHVALESVCHYSAPITRKIYRRD*VGLLHF
Trigger: GAAATGTAAGAGACCGACGCAGTCTCTTCTGTAAAT...TTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTACATGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392744.4
CDS-3UTR GCA 90 bp TCTGGGACCACTGTCACTTTTCTGAGGGCATATGTTGGGAAAAGAAAGATCATAAAGCTCGGCAGGCTGTaGAGCCATTATTTCTTCCAA +
Preference number: 4 (lower is better)
Translates to: SGTTVTFLRAYVGKRKIIKLGRL*SHYFFQ
Trigger: TTGGAAGAAATAATGGCTGCACAGCCTGCCGAGCTT...TATGATCTTTCTTTTCCCAACATATGCCCTCAGAAAAGTGACAGTGGTCCCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CCA 90 bp TCTGGGACCACTGTCACTTTTCTGAGGGCATATGTTGGGAAAAGAAAGATCATACAGAGTCTTCATCCATaGGGAACACAAAGAAGGCCT +
Preference number: 4 (lower is better)
Translates to: SGTTVTFLRAYVGKRKIIQSLHP*GTQRRP
Trigger: AGGCCTTCTTTGTGTTCCCCATGGATGAAGACTCTG...TATGATCTTTCTTTTCCCAACATATGCCCTCAGAAAAGTGACAGTGGTCCCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CCA 90 bp GTCCTCTTGAAGGAAGGTCAACACCGGCATCATGTAGCACTAGAGTCTGTGTGTATCTTCTGGGATATTTaGATAGAAACTCACCATTGC +
Preference number: 4 (lower is better)
Translates to: VLLKEGQHRHHVALESVCIFWDI*IETHHC
Trigger: GCAATGGTGAGTTTCTATCCAAATATCCCAGAAGAT...ACACACAGACTCTAGTGCTACATGATGCCGGTGTTGACCTTCCTTCAAGAGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361352.9
ENST00000449321.5
CDS-3UTR CCA 90 bp AGTCTCTGTCTTTGTGATCTTGACATTACATTGATCCAGATGTTGGCTTTCAACTATCCTGGCTACTCATaGGGCTCTGCATACTTCCCG +
Preference number: 4 (lower is better)
Translates to: SLCLCDLDITLIQMLAFNYPGYS*GSAYFP
Trigger: CGGGAAGTATGCAGAGCCCCATGAGTAGCCAGGATA...GTTGAAAGCCAACATCTGGATCAATGTAATGTCAAGATCACAAAGACAGAGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CCA 90 bp ACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACATTTTCTGTAAATGTTCTGGAGTaGTGCCAAGATTTCAGTGCC +
Preference number: 4 (lower is better)
Translates to: TRVCVSLLSTNHPEITFSVNVLE*CQDFSA
Trigger: GGCACTGAAATCTTGGCACCACTCCAGAACATTTAC...AGAAAATGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR CCA 90 bp GCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACATTTTCAGTTTTTACCTATGTaGCGATCACACAGTGCATTC +
Preference number: 4 (lower is better)
Translates to: ALESVCHYSAPITRKSHFQFLPM*RSHSAF
Trigger: GAATGCACTGTGTGATCGCCACATAGGTAAAAACTG...AAAATGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361352.9
ENST00000449321.5
CDS-3UTR CCA 90 bp TATGAGACACAAGGGTCAGGAACGATTACGGGGAGCTCCTTTCTTCCTAATGCGTCATACCTAGGATCTTaGCTAGATCTTCATTCAGAT +
Preference number: 4 (lower is better)
Translates to: YETQGSGTITGSSFLPNASYLGS*LDLHSD
Trigger: ATCTGAATGAAGATCTAGCCAAGATCCTAGGTATGA...CGCATTAGGAAGAAAGGAGCTCCCCGTAATCGTTCCTGACCCTTGTGTCTCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CCA 90 bp ACCTGGAGCAGAGAAGCGAAGTGGAGTAAGCATCCTTTACTTTTATGGCAAAAATTTCCCTGGAAACCCTaGGAGGAACATTACTGCCTA +
Preference number: 4 (lower is better)
Translates to: TWSREAKWSKHPLLLWQKFPWKP*EEHYCL
Trigger: TAGGCAGTAATGTTCCTCCCAGGGTTTCCAGGGAAA...TTTTTGCCATAAAAGTAAAGGATGCTTACTCCACTTCGCTTCTCTGCTCCAGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CCA 90 bp ACCTGGAGCAGAGAAGCGAAGTGGAGTAAGCATCCTTTACTTTTATGGCAAAAAATACCATGGGAACAGTaGAGGCATCAGAAAAGCTGG +
Preference number: 4 (lower is better)
Translates to: TWSREAKWSKHPLLLWQKIPWEQ*RHQKSW
Trigger: CCAGCTTTTCTGATGCCTCCACTGTTCCCATGGTAT...TTTTTGCCATAAAAGTAAAGGATGCTTACTCCACTTCGCTTCTCTGCTCCAGGT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000456829.7
CDS-3UTR TCA 90 bp ACAGTGGACCCCTGCAGTCTCTGTCTTTGTGATCTTGACATTACATTGATCCAGGGCCTTTCGAAAACCTaGTTGGCATTTTATCTTCAA +
Preference number: 4 (lower is better)
Translates to: TVDPCSLCLCDLDITLIQGLSKT*LAFYLQ
Trigger: TTGAAGATAAAATGCCAATCAGGTTTTCGAAAGGCC...CTGGATCAATGTAATGTCAAGATCACAAAGACAGAGACTGCAGGGGTCCACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR TCA 90 bp ATTAAAGAGGAACATCTCTCTCCAACAGTTATAGTTCAACCCAAGTCTTTCAGGCTGTGCTGGTCCTTGTaGCTTATCAACCCACAGAGA +
Preference number: 4 (lower is better)
Translates to: IKEEHLSPTVIVQPKSFRLCWSL*LINPQR
Trigger: TCTCTGTGGGTTGATAAGTCACAAGGACCAGCACAG...CCTGAAAGACTTGGGTTGAACTATAACTGTTGGAGAGAGATGTTCCTCTTTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR TCA 90 bp TCTCTCTCCAACAGTTATAGTTCAACCCAAGTCTTTCAGGCAGTGGAAGAAAAGCCACTGTCACTTTTCTaGGGGCATATGTTGGGAAAA +
Preference number: 4 (lower is better)
Translates to: SLSNSYSSTQVFQAVEEKPLSLF*GHMLGK
Trigger: TTTTCCCAACATATGCCCTCAGAAAAGTGACAGTGG...CTTTTCTTCCACTGCCTGAAAGACTTGGGTTGAACTATAACTGTTGGAGAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR GCA 90 bp TGTTTTTCATGTTGTTTCCCTGGAAACCCTGGGAGGAACATTACTGCCTATGAACTCGTAGTTCAAAGTTaGAGACACACCAGCCACAAA +
Preference number: 4 (lower is better)
Translates to: CFSCCFPGNPGRNITAYELVVQS*RHTSHK
Trigger: TTTGTGGCTGGTGTGTCTGCAACTTTGAACTACGAG...TTCATAGGCAGTAATGTTCCTCCCAGGGTTTCCAGGGAAACAACATGAAAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR GCA 90 bp AGTCTCTGTCTTTGTGATCTTGACATTACATTGATCCAGATGTTGGCTTTCAACAATGTTCTGGAGTGGTaGCAAGATTTCAGTGCCCCC +
Preference number: 4 (lower is better)
Translates to: SLCLCDLDITLIQMLAFNNVLEW*QDFSAP
Trigger: GGGGGCACTGAAATCTTGGCACCACTCCAGAACATT...GTTGAAAGCCAACATCTGGATCAATGTAATGTCAAGATCACAAAGACAGAGACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR GCA 90 bp ACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACATTTTCTAAGATTCCCCTAAACTaGCAAACTTGCAGGAACCTT +
Preference number: 4 (lower is better)
Translates to: TRVCVSLLSTNHPEITFSKIPLN*QTCRNL
Trigger: AAGGTTCCTGCAAGTTTGGCAGTTTAGGGGAATCTT...AGAAAATGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392744.4
CDS-3UTR GCA 90 bp GAAGAAAAGACATGTAGGTTGTACAGGCTAGCAAAGCCCAAGAAGAATGAATCATTAGGCTGGTGGAGGTaGCTTCTCCAATACCAAATG +
Preference number: 4 (lower is better)
Translates to: EEKTCRLYRLAKPKKNESLGWWR*LLQYQM
Trigger: CATTTGGTATTGGAGAAGGCACCTCCACCAGCCTAA...TGATTCATTCTTCTTGGGCTTTGCTAGCCTGTACAACCTACATGTCTTTTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR GCA 90 bp ATTAAAGAGGAACATCTCTCTCCAACAGTTATAGTTCAACCCAAGTCTTTCAGGTCAAGTCCTTACCATTaGTGTGCAGCCAGATCACGG +
Preference number: 4 (lower is better)
Translates to: IKEEHLSPTVIVQPKSFRSSPYH*CAARSR
Trigger: CCGTGATCTGGCTGCACAGCAATGGTAAGGACTTGA...CCTGAAAGACTTGGGTTGAACTATAACTGTTGGAGAGAGATGTTCCTCTTTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CCA 90 bp GAAGAAAAGACATGTAGGTTGTACAGGCTAGCAAAGCCCAAGAAGAATGAATCATCCCATCAAATGACCTaGCTTCATGTTAGGCATCCC +
Preference number: 4 (lower is better)
Translates to: EEKTCRLYRLAKPKKNESSHQMT*LHVRHP
Trigger: GGGATGCCTAACATGAAGCCAGGTCATTTGATGGGA...TGATTCATTCTTCTTGGGCTTTGCTAGCCTGTACAACCTACATGTCTTTTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CCA 90 bp TGTTTTTCATGTTGTTTCCCTGGAAACCCTGGGAGGAACATTACTGCCTATGAAACTCACCATTGCAGATaGATCTCCCATCAAATGACC +
Preference number: 4 (lower is better)
Translates to: CFSCCFPGNPGRNITAYETHHCR*ISHQMT
Trigger: GGTCATTTGATGGGAGATCCATCTGCAATGGTGAGT...TTCATAGGCAGTAATGTTCCTCCCAGGGTTTCCAGGGAAACAACATGAAAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CCA 90 bp CATCATGTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAAATCTTCTGGGATATTTaGATAGAAACTCACCATTGC +
Preference number: 4 (lower is better)
Translates to: HHVALESVCHYSAPITRKIFWDI*IETHHC
Trigger: GCAATGGTGAGTTTCTATCCAAATATCCCAGAAGAT...TTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTACATGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR CCA 90 bp TGTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACAATCTTCTGGGATATTTaGATAGAAACTCACCATTGC +
Preference number: 4 (lower is better)
Translates to: CSTRVCVSLLSTNHPEITIFWDI*IETHHC
Trigger: GCAATGGTGAGTTTCTATCCAAATATCCCAGAAGAT...TGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR CCA 90 bp TCTGGGACCACTGTCACTTTTCTGAGGGCATATGTTGGGAAAAGAAAGATCATAAAATCAGTGTTTCCTTaGCTGCCTGTATTCGCAGCT +
Preference number: 4 (lower is better)
Translates to: SGTTVTFLRAYVGKRKIIKSVFP*LPVFAA
Trigger: AGCTGCGAATACAGGCAGCCAAGGAAACACTGATTT...TATGATCTTTCTTTTCCCAACATATGCCCTCAGAAAAGTGACAGTGGTCCCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CCA 90 bp ACCTGGAGCAGAGAAGCGAAGTGGAGTAAGCATCCTTTACTTTTATGGCAAAAAGTAAATGTTCTGGAGTaGTGCCAAGATTTCAGTGCC +
Preference number: 4 (lower is better)
Translates to: TWSREAKWSKHPLLLWQKVNVLE*CQDFSA
Trigger: GGCACTGAAATCTTGGCACCACTCCAGAACATTTAC...TTTTTGCCATAAAAGTAAAGGATGCTTACTCCACTTCGCTTCTCTGCTCCAGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CCA 90 bp ACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACATTTTCTCAGTTTTTACCTATGTaGCGATCACACAGTGCATTC +
Preference number: 4 (lower is better)
Translates to: TRVCVSLLSTNHPEITFSQFLPM*RSHSAF
Trigger: GAATGCACTGTGTGATCGCCACATAGGTAAAAACTG...AGAAAATGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361352.9
ENST00000449321.5
CDS-3UTR CCA 90 bp CATCATGTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAAGTAAGAAGTGGGGCTTaGATAAAATCAGAGATTGAT +
Preference number: 4 (lower is better)
Translates to: HHVALESVCHYSAPITRKVRSGA*IKSEID
Trigger: ATCAATCTCTGATTTTATCCAAGCCCCACTTCTTAC...TTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTACATGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392744.4
CDS-3UTR CCA 90 bp GACAGCATATCAAATAGGGTCATTTCCACCAGGATAGGGTATATGAGACACAAGCTTTTATTAGGCTGGTaGAGGTGCCTTCTCCAATAC +
Preference number: 4 (lower is better)
Translates to: DSISNRVISTRIGYMRHKLLLGW*RCLLQY
Trigger: GTATTGGAGAAGGCACCTCCACCAGCCTAATAAAAG...CTTGTGTCTCATATACCCTATCCTGGTGGAAATGACCCTATTTGATATGCTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CCA 90 bp ACCTGGAGCAGAGAAGCGAAGTGGAGTAAGCATCCTTTACTTTTATGGCAAAAATACCTTTTATTAGGCTaGTGGAGGTGCCTTCTCCAA +
Preference number: 4 (lower is better)
Translates to: TWSREAKWSKHPLLLWQKYLLLG*WRCLLQ
Trigger: TTGGAGAAGGCACCTCCACCAGCCTAATAAAAGGTA...TTTTTGCCATAAAAGTAAAGGATGCTTACTCCACTTCGCTTCTCTGCTCCAGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CCA 90 bp TCTGGGACCACTGTCACTTTTCTGAGGGCATATGTTGGGAAAAGAAAGATCATAGCATTTTATCTTCAATaGGGCAGAAGCACCCAACAG +
Preference number: 4 (lower is better)
Translates to: SGTTVTFLRAYVGKRKIIAFYLQ*GRSTQQ
Trigger: CTGTTGGGTGCTTCTGCCCCATTGAAGATAAAATGC...TATGATCTTTCTTTTCCCAACATATGCCCTCAGAAAAGTGACAGTGGTCCCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CCA 90 bp TATGAGACACAAGGGTCAGGAACGATTACGGGGAGCTCCTTTCTTCCTAATGCGTTTCGAAAACCTGATTaGCATTTTATCTTCAATGGG +
Preference number: 4 (lower is better)
Translates to: YETQGSGTITGSSFLPNAFRKPD*HFIFNG
Trigger: CCCATTGAAGATAAAATGCCAATCAGGTTTTCGAAA...CGCATTAGGAAGAAAGGAGCTCCCCGTAATCGTTCCTGACCCTTGTGTCTCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CCA 90 bp GACCACTGTCACTTTTCTGAGGGCATATGTTGGGAAAAGAAAGATCATATCCAATTTCCCTGGAAACCCTaGGAGGAACATTACTGCCTA +
Preference number: 4 (lower is better)
Translates to: DHCHFSEGICWEKKDHIQFPWKP*EEHYCL
Trigger: TAGGCAGTAATGTTCCTCCCAGGGTTTCCAGGGAAA...TTGGATATGATCTTTCTTTTCCCAACATATGCCCTCAGAAAAGTGACAGTGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CCA 90 bp GCAGTGGAAGAAAAGACATGTAGGTTGTACAGGCTAGCAAAGCCCAAGAAGAATAGGCATCAGAAAAGCTaGAACAGAAAACAAGGGACA +
Preference number: 4 (lower is better)
Translates to: AVEEKTCRLYRLAKPKKNRHQKS*NRKQGT
Trigger: TGTCCCTTGTTTTCTGTTCCAGCTTTTCTGATGCCT...ATTCTTCTTGGGCTTTGCTAGCCTGTACAACCTACATGTCTTTTCTTCCACTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000456829.7
CDS-3UTR CCA 90 bp TATGAGACACAAGGGTCAGGAACGATTACGGGGAGCTCCTTTCTTCCTAATGCGTCTAGGAATTCTGAGTaGAACTCGAAAGTGTTAATA +
Preference number: 4 (lower is better)
Translates to: YETQGSGTITGSSFLPNASRNSE*NSKVLI
Trigger: TATTAACACTTTCGAGTTCCACTCAGAATTCCTAGA...CGCATTAGGAAGAAAGGAGCTCCCCGTAATCGTTCCTGACCCTTGTGTCTCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456829.7
3UTR CAA 72 bp CAAGTCTTTCAGGCAGTGGAAGAAAAGACATGTAGGTaGTACAGGCTAGCAAAGCCCAAGAAGAATGAATCA +
Preference number: 4 (lower is better)
Translates to: QVFQAVEEKTCR*YRLAKPKKNES
Trigger: TGATTCATTCTTCTTGGGCTTTGCTAGCCTGTACAACCTACATGTCTTTTCTTCCACTGCCTGAAAGACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR TCA 90 bp GACCACTGTCACTTTTCTGAGGGCATATGTTGGGAAAAGAAAGATCATATCCAAAGAAGTGCACCATGGTaGTGCAAGATTTCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: DHCHFSEGICWEKKDHIQRSAPW*CKISSS
Trigger: AGAGGAAGAAATCTTGCATCACCATGGTGCACTTCT...TTGGATATGATCTTTCTTTTCCCAACATATGCCCTCAGAAAAGTGACAGTGGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392748.5
CDS-3UTR TCA 90 bp CAAGTTATTTTAAGGGACAGCATATCAAATAGGGTCATTTCCACCAGGATAGGGCTCTCCACAGGTATTTaGTGGTTGATCTTCTGGGAT +
Preference number: 4 (lower is better)
Translates to: QVILRDSISNRVISTRIGLSTGI*WLIFWD
Trigger: ATCCCAGAAGATCAACCATCAAATACCTGTGGAGAG...CCCTATCCTGGTGGAAATGACCCTATTTGATATGCTGTCCCTTAAAATAACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR TCA 90 bp ACCACTGTCACTTTTCTGAGGGCATATGTTGGGAAAAGAAAGATCATATCCAAATCCTCCATTGTTTGCTaGGTGTACTTCACACTCTCC +
Preference number: 4 (lower is better)
Translates to: TTVTFLRAYVGKRKIISKSSIVC*VYFTLS
Trigger: GGAGAGTGTGAAGTACACTCAGCAAACAATGGAGGA...TTTGGATATGATCTTTCTTTTCCCAACATATGCCCTCAGAAAAGTGACAGTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR TCA 90 bp AGTCTCTGTCTTTGTGATCTTGACATTACATTGATCCAGATGTTGGCTTTCAACAAAGCCCAAGAAGAATaGATCAGGAAGGTCCCCAAC +
Preference number: 4 (lower is better)
Translates to: SLCLCDLDITLIQMLAFNKAQEE*IRKVPN
Trigger: GTTGGGGACCTTCCTGATTCATTCTTCTTGGGCTTT...GTTGAAAGCCAACATCTGGATCAATGTAATGTCAAGATCACAAAGACAGAGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR GCA 90 bp GACAGCATATCAAATAGGGTCATTTCCACCAGGATAGGGTATATGAGACACAAGCGGAGTGAAAACAGCTaGAGTCATAATTTCCGGAAA +
Preference number: 4 (lower is better)
Translates to: DSISNRVISTRIGYMRHKRSENS*SHNFRK
Trigger: TTTCCGGAAATTATGACTGCAGCTGTTTTCACTCCG...CTTGTGTCTCATATACCCTATCCTGGTGGAAATGACCCTATTTGATATGCTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392748.5
CDS-3UTR GCA 90 bp ACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACATTTTCTATAGAAACTCACCATTaGAGATGGATCTCCCATCAA +
Preference number: 4 (lower is better)
Translates to: TRVCVSLLSTNHPEITFSIETHH*RWISHQ
Trigger: TTGATGGGAGATCCATCTGCAATGGTGAGTTTCTAT...AGAAAATGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR CCA 90 bp ACAGTGGACCCCTGCAGTCTCTGTCTTTGTGATCTTGACATTACATTGATCCAGATCTTCTGGGATATTTaGATAGAAACTCACCATTGC +
Preference number: 4 (lower is better)
Translates to: TVDPCSLCLCDLDITLIQIFWDI*IETHHC
Trigger: GCAATGGTGAGTTTCTATCCAAATATCCCAGAAGAT...CTGGATCAATGTAATGTCAAGATCACAAAGACAGAGACTGCAGGGGTCCACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CCA 90 bp GACCACTGTCACTTTTCTGAGGGCATATGTTGGGAAAAGAAAGATCATATCCAAGTAAATGTTCTGGAGTaGTGCCAAGATTTCAGTGCC +
Preference number: 4 (lower is better)
Translates to: DHCHFSEGICWEKKDHIQVNVLE*CQDFSA
Trigger: GGCACTGAAATCTTGGCACCACTCCAGAACATTTAC...TTGGATATGATCTTTCTTTTCCCAACATATGCCCTCAGAAAAGTGACAGTGGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CCA 90 bp CATGTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCAAGCATAAATAACCCATaGTATTGTAAGTCAGGAAAG +
Preference number: 4 (lower is better)
Translates to: HVALESVCHYSAPITRKSSINNP*YCKSGK
Trigger: CTTTCCTGACTTACAATACCATGGGTTATTTATGCT...TGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTACATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361352.9
ENST00000449321.5
CDS-3UTR CCA 90 bp TCATTTGGTCCTCTTGAAGGAAGGTCAACACCGGCATCATGTAGCACTAGAGTCAGCATAAATAACCCATaGTATTGTAAGTCAGGAAAG +
Preference number: 4 (lower is better)
Translates to: SFGPLEGRSTPASCSTRVSINNP*YCKSGK
Trigger: CTTTCCTGACTTACAATACCATGGGTTATTTATGCT...GACTCTAGTGCTACATGATGCCGGTGTTGACCTTCCTTCAAGAGGACCAAATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361352.9
ENST00000449321.5
CDS-3UTR CCA 90 bp GAAGAAAAGACATGTAGGTTGTACAGGCTAGCAAAGCCCAAGAAGAATGAATCATACCTTTTATTAGGCTaGTGGAGGTGCCTTCTCCAA +
Preference number: 4 (lower is better)
Translates to: EEKTCRLYRLAKPKKNESYLLLG*WRCLLQ
Trigger: TTGGAGAAGGCACCTCCACCAGCCTAATAAAAGGTA...TGATTCATTCTTCTTGGGCTTTGCTAGCCTGTACAACCTACATGTCTTTTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CCA 90 bp CAAGTTATTTTAAGGGACAGCATATCAAATAGGGTCATTTCCACCAGGATAGGGGCATTTTATCTTCAATaGGGCAGAAGCACCCAACAG +
Preference number: 4 (lower is better)
Translates to: QVILRDSISNRVISTRIGAFYLQ*GRSTQQ
Trigger: CTGTTGGGTGCTTCTGCCCCATTGAAGATAAAATGC...CCCTATCCTGGTGGAAATGACCCTATTTGATATGCTGTCCCTTAAAATAACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CCA 90 bp ACAGTGGACCCCTGCAGTCTCTGTCTTTGTGATCTTGACATTACATTGATCCAGTCATACCTAGGATCTTaGCTAGATCTTCATTCAGAT +
Preference number: 4 (lower is better)
Translates to: TVDPCSLCLCDLDITLIQSYLGS*LDLHSD
Trigger: ATCTGAATGAAGATCTAGCCAAGATCCTAGGTATGA...CTGGATCAATGTAATGTCAAGATCACAAAGACAGAGACTGCAGGGGTCCACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CCA 90 bp TCTCTCTCCAACAGTTATAGTTCAACCCAAGTCTTTCAGGCAGTGGAAGAAAAGAGCAGAGAAGCGAAGTaGAGTAAGCATCCTTTACTT +
Preference number: 4 (lower is better)
Translates to: SLSNSYSSTQVFQAVEEKSREAK*SKHPLL
Trigger: AAGTAAAGGATGCTTACTCCACTTCGCTTCTCTGCT...CTTTTCTTCCACTGCCTGAAAGACTTGGGTTGAACTATAACTGTTGGAGAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR TCA 90 bp TCTGGGACCACTGTCACTTTTCTGAGGGCATATGTTGGGAAAAGAAAGATCATACAGGTATTTGATGGTTaGTCTTCTGGGATATTTGGA +
Preference number: 4 (lower is better)
Translates to: SGTTVTFLRAYVGKRKIIQVFDG*SSGIFG
Trigger: TCCAAATATCCCAGAAGATCAACCATCAAATACCTG...TATGATCTTTCTTTTCCCAACATATGCCCTCAGAAAAGTGACAGTGGTCCCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR TCA 90 bp GACAGCATATCAAATAGGGTCATTTCCACCAGGATAGGGTATATGAGACACAAGCAGGTATTTGATGGTTaGTCTTCTGGGATATTTGGA +
Preference number: 4 (lower is better)
Translates to: DSISNRVISTRIGYMRHKQVFDG*SSGIFG
Trigger: TCCAAATATCCCAGAAGATCAACCATCAAATACCTG...CTTGTGTCTCATATACCCTATCCTGGTGGAAATGACCCTATTTGATATGCTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR TCA 90 bp ATTAAAGAGGAACATCTCTCTCCAACAGTTATAGTTCAACCCAAGTCTTTCAGGCTCTCCACAGGTATTTaGTGGTTGATCTTCTGGGAT +
Preference number: 4 (lower is better)
Translates to: IKEEHLSPTVIVQPKSFRLSTGI*WLIFWD
Trigger: ATCCCAGAAGATCAACCATCAAATACCTGTGGAGAG...CCTGAAAGACTTGGGTTGAACTATAACTGTTGGAGAGAGATGTTCCTCTTTAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR TCA 90 bp AGTCTCTGTCTTTGTGATCTTGACATTACATTGATCCAGATGTTGGCTTTCAACAGCAGGATCCACAGATaGCTTCAGGAAAGTAATAGC +
Preference number: 4 (lower is better)
Translates to: SLCLCDLDITLIQMLAFNSRIHR*LQESNS
Trigger: GCTATTACTTTCCTGAAGTCATCTGTGGATCCTGCT...GTTGAAAGCCAACATCTGGATCAATGTAATGTCAAGATCACAAAGACAGAGACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR TCA 90 bp TCTGGGACCACTGTCACTTTTCTGAGGGCATATGTTGGGAAAAGAAAGATCATAACTTGGAAGAAAGACTaGGAGATTAGAGTCCACTAT +
Preference number: 4 (lower is better)
Translates to: SGTTVTFLRAYVGKRKIITWKKD*EIRVHY
Trigger: ATAGTGGACTCTAATCTCTCAGTCTTTCTTCCAAGT...TATGATCTTTCTTTTCCCAACATATGCCCTCAGAAAAGTGACAGTGGTCCCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456829.7
CDS-3UTR CCA 90 bp AGTCTCTGTCTTTGTGATCTTGACATTACATTGATCCAGATGTTGGCTTTCAACCTTTTATTAGGCTGGTaGAGGTGCCTTCTCCAATAC +
Preference number: 4 (lower is better)
Translates to: SLCLCDLDITLIQMLAFNLLLGW*RCLLQY
Trigger: GTATTGGAGAAGGCACCTCCACCAGCCTAATAAAAG...GTTGAAAGCCAACATCTGGATCAATGTAATGTCAAGATCACAAAGACAGAGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CCA 90 bp CAAGTTATTTTAAGGGACAGCATATCAAATAGGGTCATTTCCACCAGGATAGGGAAAGGGAATAGGTTCTaGGACCACTGTCACTTTTCT +
Preference number: 4 (lower is better)
Translates to: QVILRDSISNRVISTRIGKGNRF*DHCHFS
Trigger: AGAAAAGTGACAGTGGTCCCAGAACCTATTCCCTTT...CCCTATCCTGGTGGAAATGACCCTATTTGATATGCTGTCCCTTAAAATAACTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CCA 90 bp AAAAGAAGTCAGCCTACAACAGAAGATAGAGGGTCAGGATACCATGGGAACAGTAACTATTTAAGGGTATaGTCAGGATTCTACAGTGGT +
Preference number: 4 (lower is better)
Translates to: KRSQPTTEDRGSGYHGNSNYLRV*SGFYSG
Trigger: ACCACTGTAGAATCCTGACCATACCCTTAAATAGTT...ACTGTTCCCATGGTATCCTGACCCTCTATCTTCTGTTGTAGGCTGACTTCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456829.7
CDS-3UTR TCA 90 bp TCTCTCTCCAACAGTTATAGTTCAACCCAAGTCTTTCAGGCAGTGGAAGAAAAGATCTTGACATTACATTaGTCCAGATGTTGGCTTTCA +
Preference number: 4 (lower is better)
Translates to: SLSNSYSSTQVFQAVEEKILTLH*SRCWLS
Trigger: TGAAAGCCAACATCTGGATCAATGTAATGTCAAGAT...CTTTTCTTCCACTGCCTGAAAGACTTGGGTTGAACTATAACTGTTGGAGAGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR GCA 90 bp AGTCACCGATGTTCCTCTAGGAATTCTGAGTGGAACTCGAAAGTGTTAATAAAGATAGAAACTCACCATTaGAGATGGATCTCCCATCAA +
Preference number: 4 (lower is better)
Translates to: SHRCSSRNSEWNSKVLIKIETHH*RWISHQ
Trigger: TTGATGGGAGATCCATCTGCAATGGTGAGTTTCTAT...CTTTATTAACACTTTCGAGTTCCACTCAGAATTCCTAGAGGAACATCGGTGACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456829.7
CDS-3UTR GCA 90 bp AGTATCCTTTACTTGCTTCATATAAAAGAAGTCAGCCTACAACAGAAGATAGAGTTAGGCTGGTGGAGGTaGCTTCTCCAATACCAAATG +
Preference number: 4 (lower is better)
Translates to: SILYLLHIKEVSLQQKIELGWWR*LLQYQM
Trigger: CATTTGGTATTGGAGAAGGCACCTCCACCAGCCTAA...CTCTATCTTCTGTTGTAGGCTGACTTCTTTTATATGAAGCAAGTAAAGGATACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456829.7
CDS-3UTR CCA 90 bp CTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACATTTTCTTAAACAGAGGACATGTTaGAAGTTATCTGTTCAAACA +
Preference number: 4 (lower is better)
Translates to: LESVCHYSAPITRKSHFLKQRTC*KLSVQT
Trigger: TGTTTGAACAGATAACTTCCAACATGTCCTCTGTTT...AAGAAAATGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392744.4
CDS-3UTR TCA 90 bp ACCACTGTCACTTTTCTGAGGGCATATGTTGGGAAAAGAAAGATCATATCCAAAGGCCTTTCGAAAACCTaGTTGGCATTTTATCTTCAA +
Preference number: 4 (lower is better)
Translates to: TTVTFLRAYVGKRKIISKGLSKT*LAFYLQ
Trigger: TTGAAGATAAAATGCCAATCAGGTTTTCGAAAGGCC...TTTGGATATGATCTTTCTTTTCCCAACATATGCCCTCAGAAAAGTGACAGTGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CCA 90 bp CAAGTTATTTTAAGGGACAGCATATCAAATAGGGTCATTTCCACCAGGATAGGGATCTTCTGGGATATTTaGATAGAAACTCACCATTGC +
Preference number: 4 (lower is better)
Translates to: QVILRDSISNRVISTRIGIFWDI*IETHHC
Trigger: GCAATGGTGAGTTTCTATCCAAATATCCCAGAAGAT...CCCTATCCTGGTGGAAATGACCCTATTTGATATGCTGTCCCTTAAAATAACTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CCA 90 bp AGTCTCTGTCTTTGTGATCTTGACATTACATTGATCCAGATGTTGGCTTTCAACTTTCGAAAACCTGATTaGCATTTTATCTTCAATGGG +
Preference number: 4 (lower is better)
Translates to: SLCLCDLDITLIQMLAFNFRKPD*HFIFNG
Trigger: CCCATTGAAGATAAAATGCCAATCAGGTTTTCGAAA...GTTGAAAGCCAACATCTGGATCAATGTAATGTCAAGATCACAAAGACAGAGACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS GCA 90 bp GGGAGCACAAAGCGCAGAGCCCCATCTGCTTCCAGAGGCAGCTCCTaGACATACTTCAGGGTGACTGCCGCCTTCGACCCAGGTTGGAGG +
Preference number: 5 (lower is better)
Translates to: GSTKRRAPSASRGSS*TYFRVTAAFDPGWR
Trigger: CCTCCAACCTGGGTCGAAGGCGGCAGTCACCCTGAAGTATGTGCAGGAGCTGCCTCTGGAAGCAGATGGGGCTCTGCGCTTTGTGCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000392748.5
ENST00000449321.5
ENST00000456829.7
CDS GCA 90 bp ATGTGGAGCTCTCAGTCTTCCAGAGCAGGGGTTGGATCCAGGCCCTaGACCGGTAGCTTGGTCCCCTACCTTCCTCTCCTGCAGCCCGGA +
Preference number: 5 (lower is better)
Translates to: MWSSQSSRAGVGSRP*TGSLVPYLPLLQPG
Trigger: TCCGGGCTGCAGGAGAGGAAGGTAGGGGACCAAGCTACCGGTGCAGGGCCTGGATCCAACCCCTGCTCTGGAAGACTGAGAGCTCCACAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392744.4
CDS GCA 90 bp TTCAGCGGCACTGGCTCCCGGTGGAGGGTGAGTAGGCCACAGAAGTaGACCATGGTGATGCAAGATTTCTTCCTCTCCTGCAGCCCGGAG +
Preference number: 5 (lower is better)
Translates to: FSGTGSRWRVSRPQK*TMVMQDFFLSCSPE
Trigger: CTCCGGGCTGCAGGAGAGGAAGAAATCTTGCATCACCATGGTGCACTTCTGTGGCCTACTCACCCTCCACCGGGAGCCAGTGCCGCTGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361352.9
ENST00000392748.5
CDS TCA 90 bp GAGCCCCATCTGCTTCCAGAGGCAGCTCCTGCACATACTTCAGGGTaGCTGCCGCCTTCGACCCAGGTTGGAGGTTACCCACATTGCAAG +
Preference number: 5 (lower is better)
Translates to: EPHLLPEAAPAHTSG*LPPSTQVGGYPHCK
Trigger: CTTGCAATGTGGGTAACCTCCAACCTGGGTCGAAGGCGGCAGTCACCCTGAAGTATGTGCAGGAGCTGCCTCTGGAAGCAGATGGGGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000392748.5
ENST00000449321.5
ENST00000456829.7
CDS CCA 90 bp ACTTCAAGTCCTTACCATTGCTGTGCAGCCAGATCACGGCCAGGATaGTGGCCCAGCCTGAGGAATCCACAAGCTCGGCAGGCTGTGCAG +
Preference number: 5 (lower is better)
Translates to: TSSPYHCCAARSRPG*WPSLRNPQARQAVQ
Trigger: CTGCACAGCCTGCCGAGCTTGTGGATTCCTCAGGCTGGGCCACCATCCTGGCCGTGATCTGGCTGCACAGCAATGGTAAGGACTTGAAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS GCA 90 bp CCCATCTGCTTCCAGAGGCAGCTCCTGCACATACTTCAGGGTGACTaGCGCCTTCGACCCAGGTTGGAGGTTACCCACATTGCAAGAGAA +
Preference number: 5 (lower is better)
Translates to: PICFQRQLLHILQGD*RLRPRLEVTHIARE
Trigger: TTCTCTTGCAATGTGGGTAACCTCCAACCTGGGTCGAAGGCGGCAGTCACCCTGAAGTATGTGCAGGAGCTGCCTCTGGAAGCAGATGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000392748.5
ENST00000449321.5
ENST00000456829.7
CDS GCA 90 bp CCAGGAGGCAAATGCCAGCTCAGAGAGACATCCTCTACCACAGGCTaGAGAGAGCGTTTCAGAGTCCTGAGAGCCTTGGACTGCATCCTG +
Preference number: 5 (lower is better)
Translates to: PGGKCQLRETSSTTG*RERFRVLRALDCIL
Trigger: CAGGATGCAGTCCAAGGCTCTCAGGACTCTGAAACGCTCTCTGCAGCCTGTGGTAGAGGATGTCTCTCTGAGCTGGCATTTGCCTCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS CCA 90 bp GTCCTTAGACGACCCAGAGAACTGGTATCTAGGATTCAGGACAGCTaGGAGCACAAAGCGCAGAGCCCCATCTGCTTCCAGAGGCAGCTC +
Preference number: 5 (lower is better)
Translates to: VLRRPRELVSRIQDS*EHKAQSPICFQRQL
Trigger: GAGCTGCCTCTGGAAGCAGATGGGGCTCTGCGCTTTGTGCTCCCAGCTGTCCTGAATCCTAGATACCAGTTCTCTGGGTCGTCTAAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000392748.5
ENST00000449321.5
ENST00000456829.7
CDS CCA 90 bp GAGGAGAGGATGCTCAGAAAAGGGCTTCTACGCAGACCTCTGACCTaGGCAAGTTCTCTGGTAGAACAGGCTGGGCTTCCTCTCCTGCAG +
Preference number: 5 (lower is better)
Translates to: EERMLRKGLLRRPLT*ASSLVEQAGLPLLQ
Trigger: CTGCAGGAGAGGAAGCCCAGCCTGTTCTACCAGAGAACTTGCCCAGGTCAGAGGTCTGCGTAGAAGCCCTTTTCTGAGCATCCTCTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449321.5
ENST00000456829.7
CDS-3UTR CAA 90 bp TCAGGAAGGTCCCCAACAGTGTCACCTCTCACAGTGGACCCCTGCAGTCTCTGTACGTCCCGATCAAACTaGTGTCCAGCAGCCAGGGAA +
Preference number: 5 (lower is better)
Translates to: SGRSPTVSPLTVDPCSLCTSRSN*CPAARE
Trigger: TTCCCTGGCTGCTGGACACAAGTTTGATCGGGACGT...ACAGAGACTGCAGGGGTCCACTGTGAGAGGTGACACTGTTGGGGACCTTCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CAA 90 bp CATCATGTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAACCCTGCACCGGTAGCTaGGTCCCCTACCTTCCTCTC +
Preference number: 5 (lower is better)
Translates to: HHVALESVCHYSAPITRKPCTGS*VPYLPL
Trigger: GAGAGGAAGGTAGGGGACCAAGCTACCGGTGCAGGG...TTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTACATGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392744.4
CDS-3UTR CAA 90 bp AGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACATTTCTTCCAGAGCAGGGGTaGGATCCAGGCCCTGCACCG +
Preference number: 5 (lower is better)
Translates to: STRVCVSLLSTNHPEITFLPEQG*DPGPAP
Trigger: CGGTGCAGGGCCTGGATCCAACCCCTGCTCTGGAAG...AAATGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392744.4
CDS CCA 90 bp AGCTGCTGTCCCCCTCCAATAAGAAGGCCTGGTGGCCCTGGGAGATaGCTTTCTCATAGTTGGTGCGGGCCTTCATCTTGTCTTGTAATT +
Preference number: 5 (lower is better)
Translates to: SCCPPPIRRPGGPGR*LSHSWCGPSSCLVI
Trigger: AATTACAAGACAAGATGAAGGCCCGCACCAACTATGAGAAAGCCATCTCCCAGGGCCACCAGGCCTTCTTATTGGAGGGGGACAGCAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000392748.5
ENST00000449321.5
ENST00000456829.7
CDS CCA 90 bp TTGTCCTCTCCTAGGTACTCGGTAGGACTCAAGGGGCAGTTGGATTaGACCTTCTCAATGCCATGCTGGGAATCTATGGTGGCGACCATG +
Preference number: 5 (lower is better)
Translates to: LSSPRYSVGLKGQLD*TFSMPCWESMVATM
Trigger: CATGGTCGCCACCATAGATTCCCAGCATGGCATTGAGAAGGTCCAATCCAACTGCCCCTTGAGTCCTACCGAGTACCTAGGAGAGGACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000392748.5
ENST00000449321.5
ENST00000456829.7
CDS-3UTR CAA 90 bp AATGAATCAGGAAGGTCCCCAACAGTGTCACCTCTCACAGTGGACCCCTGCAGTCAAGGGGCAGTTGGATaGGACCTTCTCAATGCCATG +
Preference number: 5 (lower is better)
Translates to: NESGRSPTVSPLTVDPCSQGAVG*DLLNAM
Trigger: CATGGCATTGAGAAGGTCCAATCCAACTGCCCCTTG...ACTGCAGGGGTCCACTGTGAGAGGTGACACTGTTGGGGACCTTCCTGATTCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CAA 90 bp TCAGGAAGGTCCCCAACAGTGTCACCTCTCACAGTGGACCCCTGCAGTCTCTGTAGCCTCCTCCATTGTTaGCTGAGTGTACTTCACACT +
Preference number: 5 (lower is better)
Translates to: SGRSPTVSPLTVDPCSLCSLLHC*LSVLHT
Trigger: AGTGTGAAGTACACTCAGCAAACAATGGAGGAGGCT...ACAGAGACTGCAGGGGTCCACTGTGAGAGGTGACACTGTTGGGGACCTTCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CAA 90 bp TATGAGACACAAGGGTCAGGAACGATTACGGGGAGCTCCTTTCTTCCTAATGCGCTGAGGCCCATGTCCTaGGTCTGGAGCAAGGACTTG +
Preference number: 5 (lower is better)
Translates to: YETQGSGTITGSSFLPNALRPMS*VWSKDL
Trigger: CAAGTCCTTGCTCCAGACCAAGGACATGGGCCTCAG...CGCATTAGGAAGAAAGGAGCTCCCCGTAATCGTTCCTGACCCTTGTGTCTCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS GCA 90 bp TTCAGCGGCACTGGCTCCCGGTGGAGGGTGAGTAGGCCACAGAAGTaGACCATGGTGATGCAAGATTTCTGCAGAAAAGACATATCACAA +
Preference number: 5 (lower is better)
Translates to: FSGTGSRWRVSRPQK*TMVMQDFCRKDISQ
Trigger: TTGTGATATGTCTTTTCTGCAGAAATCTTGCATCACCATGGTGCACTTCTGTGGCCTACTCACCCTCCACCGGGAGCCAGTGCCGCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392744.4
CDS-3UTR CAA 90 bp GTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACATCGCCTTCGACCCAGGTaGGAGGTTACCCACATTGCA +
Preference number: 5 (lower is better)
Translates to: VALESVCHYSAPITRKSHRLRPR*EVTHIA
Trigger: TGCAATGTGGGTAACCTCCAACCTGGGTCGAAGGCG...ATGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR CAA 90 bp GCATCATGTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAACAAGGGGCAGTTGGATaGGACCTTCTCAATGCCATG +
Preference number: 5 (lower is better)
Translates to: ASCSTRVCVSLLSTNHPEQGAVG*DLLNAM
Trigger: CATGGCATTGAGAAGGTCCAATCCAACTGCCCCTTG...TTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTACATGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361352.9
ENST00000449321.5
CDS-3UTR CAA 90 bp CATGTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCAACGTCCCGATCAAACTaGTGTCCAGCAGCCAGGGAA +
Preference number: 5 (lower is better)
Translates to: HVALESVCHYSAPITRKSTSRSN*CPAARE
Trigger: TTCCCTGGCTGCTGGACACAAGTTTGATCGGGACGT...TGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTACATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR CAA 90 bp CATCATGTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAAACGTCCCGATCAAACTaGTGTCCAGCAGCCAGGGAA +
Preference number: 5 (lower is better)
Translates to: HHVALESVCHYSAPITRKTSRSN*CPAARE
Trigger: TTCCCTGGCTGCTGGACACAAGTTTGATCGGGACGT...TTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTACATGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR CAA 90 bp AATGAATCAGGAAGGTCCCCAACAGTGTCACCTCTCACAGTGGACCCCTGCAGTAAAATCAGTGTTTCCTaGGCTGCCTGTATTCGCAGC +
Preference number: 5 (lower is better)
Translates to: NESGRSPTVSPLTVDPCSKISVS*AACIRS
Trigger: GCTGCGAATACAGGCAGCCAAGGAAACACTGATTTT...ACTGCAGGGGTCCACTGTGAGAGGTGACACTGTTGGGGACCTTCCTGATTCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CAA 90 bp AATGAATCAGGAAGGTCCCCAACAGTGTCACCTCTCACAGTGGACCCCTGCAGTAGCCTCCTCCATTGTTaGCTGAGTGTACTTCACACT +
Preference number: 5 (lower is better)
Translates to: NESGRSPTVSPLTVDPCSSLLHC*LSVLHT
Trigger: AGTGTGAAGTACACTCAGCAAACAATGGAGGAGGCT...ACTGCAGGGGTCCACTGTGAGAGGTGACACTGTTGGGGACCTTCCTGATTCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS CCA 90 bp ATTCTGAGGTGCCCCCTGATGCCCGGGCAATACCTTTTATTAGGCTaGTGGAGGTGCCTTCTCCAATACCAAATGAGAAACACCTGTGTT +
Preference number: 5 (lower is better)
Translates to: ILRCPLMPGQYLLLG*WRCLLQYQMRNTCV
Trigger: AACACAGGTGTTTCTCATTTGGTATTGGAGAAGGCACCTCCACCAGCCTAATAAAAGGTATTGCCCGGGCATCAGGGGGCACCTCAGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CAA 90 bp ACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACATTTTCTCGCCTTCGACCCAGGTaGGAGGTTACCCACATTGCA +
Preference number: 5 (lower is better)
Translates to: TRVCVSLLSTNHPEITFSRLRPR*EVTHIA
Trigger: TGCAATGTGGGTAACCTCCAACCTGGGTCGAAGGCG...AGAAAATGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR CAA 90 bp CATCATGTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAAGGACTCAAGGGGCAGTaGGATTGGACCTTCTCAATG +
Preference number: 5 (lower is better)
Translates to: HHVALESVCHYSAPITRKGLKGQ*DWTFSM
Trigger: CATTGAGAAGGTCCAATCCAACTGCCCCTTGAGTCC...TTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTACATGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR CAA 90 bp GGTCAGGATACCATGGGAACAGTGGAGGCATCAGAAAAGCTGGAACAGAAAACAGGACTCAAGGGGCAGTaGGATTGGACCTTCTCAATG +
Preference number: 5 (lower is better)
Translates to: GQDTMGTVEASEKLEQKTGLKGQ*DWTFSM
Trigger: CATTGAGAAGGTCCAATCCAACTGCCCCTTGAGTCC...TGTTTTCTGTTCCAGCTTTTCTGATGCCTCCACTGTTCCCATGGTATCCTGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000456829.7
CDS-3UTR CAA 90 bp TCAGGAAGGTCCCCAACAGTGTCACCTCTCACAGTGGACCCCTGCAGTCTCTGTGATCTTCTGGGATATTaGGATAGAAACTCACCATTG +
Preference number: 5 (lower is better)
Translates to: SGRSPTVSPLTVDPCSLCDLLGY*DRNSPL
Trigger: CAATGGTGAGTTTCTATCCAAATATCCCAGAAGATC...ACAGAGACTGCAGGGGTCCACTGTGAGAGGTGACACTGTTGGGGACCTTCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CAA 90 bp CATCATGTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAACCTAAACTGCCAAACTaGCAGGAACCTTCCTGGGGA +
Preference number: 5 (lower is better)
Translates to: HHVALESVCHYSAPITRKPKLPN*QEPSWG
Trigger: TCCCCAGGAAGGTTCCTGCAAGTTTGGCAGTTTAGG...TTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTACATGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392744.4
CDS-3UTR CAA 90 bp CAGGCAGTGGAAGAAAAGACATGTAGGTTGTACAGGCTAGCAAAGCCCAAGAAGAGAGTCCTGAGAGCCTaGGACTGCATCCTGTCTTTG +
Preference number: 5 (lower is better)
Translates to: QAVEEKTCRLYRLAKPKKRVLRA*DCILSL
Trigger: CAAAGACAGGATGCAGTCCAAGGCTCTCAGGACTCT...CTTCTTGGGCTTTGCTAGCCTGTACAACCTACATGTCTTTTCTTCCACTGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS TCA 90 bp AATAGCCTTCGCTTCCTGATTCTAAGCTCAGAACAAATCCTCCGTTaGGGAAAACTTGCTATTCTGCACCCTTGCCCCCACTCTTCCCAG +
Preference number: 5 (lower is better)
Translates to: NSLRFLILSSEQILR*GKLAILHPCPHSSQ
Trigger: CTGGGAAGAGTGGGGGCAAGGGTGCAGAATAGCAAGTTTTCCTCAACGGAGGATTTGTTCTGAGCTTAGAATCAGGAAGCGAAGGCTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392744.4
CDS TCA 90 bp GAAATGTCACCTTATCCTCAAAAGTCTTGCCCTGGAGTGTATATTTaGGGCATACTTCTCCTGTTGTCTCTGCTGCTGGCATCCTCCCGG +
Preference number: 5 (lower is better)
Translates to: EMSPYPQKSCPGVYI*GILLLLSLLLASSR
Trigger: CCGGGAGGATGCCAGCAGCAGAGACAACAGGAGAAGTATGCCTCAAATATACACTCCAGGGCAAGACTTTTGAGGATAAGGTGACATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CAA 90 bp AGGGTATATGAGACACAAGGGTCAGGAACGATTACGGGGAGCTCCTTTCTTCCTTCTCGTAGTTCAAAGTaGCAGACACACCAGCCACAA +
Preference number: 5 (lower is better)
Translates to: RVYETQGSGTITGSSFLPSRSSK*QTHQPQ
Trigger: TTGTGGCTGGTGTGTCTGCAACTTTGAACTACGAGA...AGGAAGAAAGGAGCTCCCCGTAATCGTTCCTGACCCTTGTGTCTCATATACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CAA 90 bp GTCCTCTTGAAGGAAGGTCAACACCGGCATCATGTAGCACTAGAGTCTGTGTGTTCTCGTAGTTCAAAGTaGCAGACACACCAGCCACAA +
Preference number: 5 (lower is better)
Translates to: VLLKEGQHRHHVALESVCSRSSK*QTHQPQ
Trigger: TTGTGGCTGGTGTGTCTGCAACTTTGAACTACGAGA...ACACACAGACTCTAGTGCTACATGATGCCGGTGTTGACCTTCCTTCAAGAGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361352.9
ENST00000449321.5
CDS-3UTR CAA 90 bp CATCATGTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATGGAGGTTACCCACATaGCAAGAGAAGACATCCCTG +
Preference number: 5 (lower is better)
Translates to: HHVALESVCHYSAPITRKWRLPT*QEKTSL
Trigger: CAGGGATGTCTTCTCTTGCAATGTGGGTAACCTCCA...TTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTACATGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR CAA 90 bp TCATGTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCTGGAGGTTACCCACATaGCAAGAGAAGACATCCCTG +
Preference number: 5 (lower is better)
Translates to: SCSTRVCVSLLSTNHPEIWRLPT*QEKTSL
Trigger: CAGGGATGTCTTCTCTTGCAATGTGGGTAACCTCCA...GATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTACATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR CAA 90 bp GTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACATTGGAGGTTACCCACATaGCAAGAGAAGACATCCCTG +
Preference number: 5 (lower is better)
Translates to: VALESVCHYSAPITRKSHWRLPT*QEKTSL
Trigger: CAGGGATGTCTTCTCTTGCAATGTGGGTAACCTCCA...ATGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR CAA 90 bp TCTGGGACCACTGTCACTTTTCTGAGGGCATATGTTGGGAAAAGAAAGATCATACGCCTTCGACCCAGGTaGGAGGTTACCCACATTGCA +
Preference number: 5 (lower is better)
Translates to: SGTTVTFLRAYVGKRKIIRLRPR*EVTHIA
Trigger: TGCAATGTGGGTAACCTCCAACCTGGGTCGAAGGCG...TATGATCTTTCTTTTCCCAACATATGCCCTCAGAAAAGTGACAGTGGTCCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CAA 90 bp AGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACATTTCAAGGGGCAGTTGGATaGGACCTTCTCAATGCCATG +
Preference number: 5 (lower is better)
Translates to: STRVCVSLLSTNHPEITFQGAVG*DLLNAM
Trigger: CATGGCATTGAGAAGGTCCAATCCAACTGCCCCTTG...AAATGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR CAA 90 bp AGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACATTTGGACTCAAGGGGCAGTaGGATTGGACCTTCTCAATG +
Preference number: 5 (lower is better)
Translates to: STRVCVSLLSTNHPEITFGLKGQ*DWTFSM
Trigger: CATTGAGAAGGTCCAATCCAACTGCCCCTTGAGTCC...AAATGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR CAA 90 bp CAACAGTGTCACCTCTCACAGTGGACCCCTGCAGTCTCTGTCTTTGTGATCTTGGATAGAAACTCACCATaGCAGATGGATCTCCCATCA +
Preference number: 5 (lower is better)
Translates to: QQCHLSQWTPAVSVFVILDRNSP*QMDLPS
Trigger: TGATGGGAGATCCATCTGCAATGGTGAGTTTCTATC...CAAGATCACAAAGACAGAGACTGCAGGGGTCCACTGTGAGAGGTGACACTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CAA 90 bp TCATGTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCCCAGAGCCTCCTCCATaGTTTGCTGAGTGTACTTCA +
Preference number: 5 (lower is better)
Translates to: SCSTRVCVSLLSTNHPEIPEPPP*FAECTS
Trigger: TGAAGTACACTCAGCAAACAATGGAGGAGGCTCTGG...GATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTACATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR CAA 90 bp CAGGCAGTGGAAGAAAAGACATGTAGGTTGTACAGGCTAGCAAAGCCCAAGAAGCCAGAGCCTCCTCCATaGTTTGCTGAGTGTACTTCA +
Preference number: 5 (lower is better)
Translates to: QAVEEKTCRLYRLAKPKKPEPPP*FAECTS
Trigger: TGAAGTACACTCAGCAAACAATGGAGGAGGCTCTGG...CTTCTTGGGCTTTGCTAGCCTGTACAACCTACATGTCTTTTCTTCCACTGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CAA 90 bp TGTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACACCAGAGCCTCCTCCATaGTTTGCTGAGTGTACTTCA +
Preference number: 5 (lower is better)
Translates to: CSTRVCVSLLSTNHPEITPEPPP*FAECTS
Trigger: TGAAGTACACTCAGCAAACAATGGAGGAGGCTCTGG...TGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR CAA 90 bp GGTCAGGATACCATGGGAACAGTGGAGGCATCAGAAAAGCTGGAACAGAAAACACCAGAGCCTCCTCCATaGTTTGCTGAGTGTACTTCA +
Preference number: 5 (lower is better)
Translates to: GQDTMGTVEASEKLEQKTPEPPP*FAECTS
Trigger: TGAAGTACACTCAGCAAACAATGGAGGAGGCTCTGG...TGTTTTCTGTTCCAGCTTTTCTGATGCCTCCACTGTTCCCATGGTATCCTGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456829.7
CDS-3UTR CAA 90 bp GAAGGAAGGTCAACACCGGCATCATGTAGCACTAGAGTCTGTGTGTCACTACTCAATCATTTGGTCCTCTaGAAGGAAGGTCAACACCGG +
Preference number: 5 (lower is better)
Translates to: EGRSTPASCSTRVCVSLLNHLVL*KEGQHR
Trigger: CCGGTGTTGACCTTCCTTCAAGAGGACCAAATGATT...GAGTAGTGACACACAGACTCTAGTGCTACATGATGCCGGTGTTGACCTTCCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361352.9
ENST00000449321.5
CDS-3UTR CAA 90 bp TGTTTTTCATGTTGTTTCCCTGGAAACCCTGGGAGGAACATTACTGCCTATGAACTGAGGCCCATGTCCTaGGTCTGGAGCAAGGACTTG +
Preference number: 5 (lower is better)
Translates to: CFSCCFPGNPGRNITAYELRPMS*VWSKDL
Trigger: CAAGTCCTTGCTCCAGACCAAGGACATGGGCCTCAG...TTCATAGGCAGTAATGTTCCTCCCAGGGTTTCCAGGGAAACAACATGAAAAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CAA 90 bp AATGAATCAGGAAGGTCCCCAACAGTGTCACCTCTCACAGTGGACCCCTGCAGTCTCATACCTAGGATCTaGGCTAGATCTTCATTCAGA +
Preference number: 5 (lower is better)
Translates to: NESGRSPTVSPLTVDPCSLIPRI*ARSSFR
Trigger: TCTGAATGAAGATCTAGCCAAGATCCTAGGTATGAG...ACTGCAGGGGTCCACTGTGAGAGGTGACACTGTTGGGGACCTTCCTGATTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS CCA 90 bp CATCCACCAAGGCCTCAAAGCTGTAAACAGCAGAGTCTTCATCCATaGGGAACACAAAGAAGGCCTCCAAAGGAACTTTCTCCTCATTCT +
Preference number: 5 (lower is better)
Translates to: HPPRPQSCKQQSLHP*GTQRRPPKELSPHS
Trigger: AGAATGAGGAGAAAGTTCCTTTGGAGGCCTTCTTTGTGTTCCCCATGGATGAAGACTCTGCTGTTTACAGCTTTGAGGCCTTGGTGGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000392748.5
ENST00000449321.5
ENST00000456829.7
ENST00000533623.1
CDS-3UTR CAA 90 bp GGTCAGGATACCATGGGAACAGTGGAGGCATCAGAAAAGCTGGAACAGAAAACATCTCGTAGTTCAAAGTaGCAGACACACCAGCCACAA +
Preference number: 5 (lower is better)
Translates to: GQDTMGTVEASEKLEQKTSRSSK*QTHQPQ
Trigger: TTGTGGCTGGTGTGTCTGCAACTTTGAACTACGAGA...TGTTTTCTGTTCCAGCTTTTCTGATGCCTCCACTGTTCCCATGGTATCCTGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456829.7
CDS-3UTR CAA 90 bp ACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACATTTTCTCAAGGGGCAGTTGGATaGGACCTTCTCAATGCCATG +
Preference number: 5 (lower is better)
Translates to: TRVCVSLLSTNHPEITFSQGAVG*DLLNAM
Trigger: CATGGCATTGAGAAGGTCCAATCCAACTGCCCCTTG...AGAAAATGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR CAA 90 bp GCAGTGGAAGAAAAGACATGTAGGTTGTACAGGCTAGCAAAGCCCAAGAAGAATCAAGGGGCAGTTGGATaGGACCTTCTCAATGCCATG +
Preference number: 5 (lower is better)
Translates to: AVEEKTCRLYRLAKPKKNQGAVG*DLLNAM
Trigger: CATGGCATTGAGAAGGTCCAATCCAACTGCCCCTTG...ATTCTTCTTGGGCTTTGCTAGCCTGTACAACCTACATGTCTTTTCTTCCACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CAA 90 bp CTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACATTTTCTTGGACTCAAGGGGCAGTaGGATTGGACCTTCTCAATG +
Preference number: 5 (lower is better)
Translates to: LESVCHYSAPITRKSHFLGLKGQ*DWTFSM
Trigger: CATTGAGAAGGTCCAATCCAACTGCCCCTTGAGTCC...AAGAAAATGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR CAA 90 bp ATTACATTGATCCAGATGTTGGCTTTCAACTTCCCTCTAACTCCTCCTACGCAAACGTCCCGATCAAACTaGTGTCCAGCAGCCAGGGAA +
Preference number: 5 (lower is better)
Translates to: ITLIQMLAFNFPLTPPTQTSRSN*CPAARE
Trigger: TTCCCTGGCTGCTGGACACAAGTTTGATCGGGACGT...TTGCGTAGGAGGAGTTAGAGGGAAGTTGAAAGCCAACATCTGGATCAATGTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CAA 90 bp GTCCTCTTGAAGGAAGGTCAACACCGGCATCATGTAGCACTAGAGTCTGTGTGTGATAGAAACTCACCATaGCAGATGGATCTCCCATCA +
Preference number: 5 (lower is better)
Translates to: VLLKEGQHRHHVALESVCDRNSP*QMDLPS
Trigger: TGATGGGAGATCCATCTGCAATGGTGAGTTTCTATC...ACACACAGACTCTAGTGCTACATGATGCCGGTGTTGACCTTCCTTCAAGAGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361352.9
ENST00000449321.5
CDS-3UTR CAA 90 bp GAAGGAAGGTCAACACCGGCATCATGTAGCACTAGAGTCTGTGTGTCACTACTCACTCTCCACAGGTATTaGATGGTTGATCTTCTGGGA +
Preference number: 5 (lower is better)
Translates to: EGRSTPASCSTRVCVSLLTLHRY*MVDLLG
Trigger: TCCCAGAAGATCAACCATCAAATACCTGTGGAGAGT...GAGTAGTGACACACAGACTCTAGTGCTACATGATGCCGGTGTTGACCTTCCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361352.9
ENST00000449321.5
CDS-3UTR CAA 90 bp GTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACATAAAATCAGTGTTTCCTaGGCTGCCTGTATTCGCAGC +
Preference number: 5 (lower is better)
Translates to: VALESVCHYSAPITRKSHKISVS*AACIRS
Trigger: GCTGCGAATACAGGCAGCCAAGGAAACACTGATTTT...ATGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR CAA 90 bp CATCATGTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAAAAAATCAGTGTTTCCTaGGCTGCCTGTATTCGCAGC +
Preference number: 5 (lower is better)
Translates to: HHVALESVCHYSAPITRKKISVS*AACIRS
Trigger: GCTGCGAATACAGGCAGCCAAGGAAACACTGATTTT...TTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTACATGATG
48% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR CAA 90 bp GTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACATAGCCTCCTCCATTGTTaGCTGAGTGTACTTCACACT +
Preference number: 5 (lower is better)
Translates to: VALESVCHYSAPITRKSHSLLHC*LSVLHT
Trigger: AGTGTGAAGTACACTCAGCAAACAATGGAGGAGGCT...ATGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR CAA 90 bp TCATGTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCAGCCTCCTCCATTGTTaGCTGAGTGTACTTCACACT +
Preference number: 5 (lower is better)
Translates to: SCSTRVCVSLLSTNHPEISLLHC*LSVLHT
Trigger: AGTGTGAAGTACACTCAGCAAACAATGGAGGAGGCT...GATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTACATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR CAA 90 bp GTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACATAATCATTTGGTCCTCTaGAAGGAAGGTCAACACCGG +
Preference number: 5 (lower is better)
Translates to: VALESVCHYSAPITRKSHNHLVL*KEGQHR
Trigger: CCGGTGTTGACCTTCCTTCAAGAGGACCAAATGATT...ATGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361352.9
ENST00000449321.5
CDS-3UTR CAA 90 bp CATCATGTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAACTTCAGAAAGGCAACTaGCAAGGCTTAGGTAGAGAC +
Preference number: 5 (lower is better)
Translates to: HHVALESVCHYSAPITRKLQKGN*QGLGRD
Trigger: GTCTCTACCTAAGCCTTGCAAGTTGCCTTTCTGAAG...TTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTACATGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392744.4
CDS-3UTR CAA 90 bp GCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACATTTTTCCGTTGAGGAAAACTaGCTATTCTGCACCCTTGCC +
Preference number: 5 (lower is better)
Translates to: ALESVCHYSAPITRKSHFSVEEN*LFCTLA
Trigger: GGCAAGGGTGCAGAATAGCAAGTTTTCCTCAACGGA...AAAATGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392744.4
CDS-3UTR CAA 90 bp TGTTTTTCATGTTGTTTCCCTGGAAACCCTGGGAGGAACATTACTGCCTATGAACCAACAGAATTGGCCTaGGGACGTCCCTATGAGCCA +
Preference number: 5 (lower is better)
Translates to: CFSCCFPGNPGRNITAYEPTELA*GRPYEP
Trigger: TGGCTCATAGGGACGTCCCAAGGCCAATTCTGTTGG...TTCATAGGCAGTAATGTTCCTCCCAGGGTTTCCAGGGAAACAACATGAAAAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CAA 90 bp TCTGGGACCACTGTCACTTTTCTGAGGGCATATGTTGGGAAAAGAAAGATCATACCAACAGAATTGGCCTaGGGACGTCCCTATGAGCCA +
Preference number: 5 (lower is better)
Translates to: SGTTVTFLRAYVGKRKIIPTELA*GRPYEP
Trigger: TGGCTCATAGGGACGTCCCAAGGCCAATTCTGTTGG...TATGATCTTTCTTTTCCCAACATATGCCCTCAGAAAAGTGACAGTGGTCCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS GCA 90 bp GAAGGCCTCCAAAGGAACTTTCTCCTCATTCTCGTAGTTCAAAGTTaGAGACACACCAGCCACAAACTCGTAAATGTTCACGCTCACAGA +
Preference number: 5 (lower is better)
Translates to: EGLQRNFLLILVVQS*RHTSHKLVNVHAHR
Trigger: TCTGTGAGCGTGAACATTTACGAGTTTGTGGCTGGTGTGTCTGCAACTTTGAACTACGAGAATGAGGAGAAAGTTCCTTTGGAGGCCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000392748.5
ENST00000449321.5
ENST00000456829.7
ENST00000533623.1
CDS-3UTR CAA 90 bp ACCACTGTCACTTTTCTGAGGGCATATGTTGGGAAAAGAAAGATCATATCCAAACGCCTTCGACCCAGGTaGGAGGTTACCCACATTGCA +
Preference number: 5 (lower is better)
Translates to: TTVTFLRAYVGKRKIISKRLRPR*EVTHIA
Trigger: TGCAATGTGGGTAACCTCCAACCTGGGTCGAAGGCG...TTTGGATATGATCTTTCTTTTCCCAACATATGCCCTCAGAAAAGTGACAGTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CAA 90 bp CATCATGTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAAGATAGAAACTCACCATaGCAGATGGATCTCCCATCA +
Preference number: 5 (lower is better)
Translates to: HHVALESVCHYSAPITRKDRNSP*QMDLPS
Trigger: TGATGGGAGATCCATCTGCAATGGTGAGTTTCTATC...TTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTACATGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR CAA 90 bp GTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACATACTCTCCACAGGTATTaGATGGTTGATCTTCTGGGA +
Preference number: 5 (lower is better)
Translates to: VALESVCHYSAPITRKSHTLHRY*MVDLLG
Trigger: TCCCAGAAGATCAACCATCAAATACCTGTGGAGAGT...ATGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR CAA 90 bp GATCCAGATGTTGGCTTTCAACTTCCCTCTAACTCCTCCTACGCAAGCTTACCAACTCTCCACAGGTATTaGATGGTTGATCTTCTGGGA +
Preference number: 5 (lower is better)
Translates to: DPDVGFQLPSNSSYASLPTLHRY*MVDLLG
Trigger: TCCCAGAAGATCAACCATCAAATACCTGTGGAGAGT...TGGTAAGCTTGCGTAGGAGGAGTTAGAGGGAAGTTGAAAGCCAACATCTGGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CAA 90 bp ACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACATTTTCTCCAGAGCCTCCTCCATaGTTTGCTGAGTGTACTTCA +
Preference number: 5 (lower is better)
Translates to: TRVCVSLLSTNHPEITFSPEPPP*FAECTS
Trigger: TGAAGTACACTCAGCAAACAATGGAGGAGGCTCTGG...AGAAAATGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR CAA 90 bp GTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACATGTTGGAGTTAGGAAGTaGGAACAATTCGACAGCAAC +
Preference number: 5 (lower is better)
Translates to: VALESVCHYSAPITRKSHVGVRK*EQFDSN
Trigger: GTTGCTGTCGAATTGTTCCAACTTCCTAACTCCAAC...ATGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392744.4
CDS-3UTR CAA 90 bp TGTTTTTCATGTTGTTTCCCTGGAAACCCTGGGAGGAACATTACTGCCTATGAAAGAGTCCTGAGAGCCTaGGACTGCATCCTGTCTTTG +
Preference number: 5 (lower is better)
Translates to: CFSCCFPGNPGRNITAYERVLRA*DCILSL
Trigger: CAAAGACAGGATGCAGTCCAAGGCTCTCAGGACTCT...TTCATAGGCAGTAATGTTCCTCCCAGGGTTTCCAGGGAAACAACATGAAAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CAA 90 bp ACAGTGGACCCCTGCAGTCTCTGTCTTTGTGATCTTGACATTACATTGATCCAGAGGTTGACATCAGGCTaGGGTTGTAGAGGAAATGTC +
Preference number: 5 (lower is better)
Translates to: TVDPCSLCLCDLDITLIQRLTSG*GCRGNV
Trigger: GACATTTCCTCTACAACCCAAGCCTGATGTCAACCT...CTGGATCAATGTAATGTCAAGATCACAAAGACAGAGACTGCAGGGGTCCACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CAA 90 bp TGTTTTTCATGTTGTTTCCCTGGAAACCCTGGGAGGAACATTACTGCCTATGAAAAGCACCCAACAGAATaGGCCTTGGGACGTCCCTAT +
Preference number: 5 (lower is better)
Translates to: CFSCCFPGNPGRNITAYEKHPTE*ALGRPY
Trigger: ATAGGGACGTCCCAAGGCCAATTCTGTTGGGTGCTT...TTCATAGGCAGTAATGTTCCTCCCAGGGTTTCCAGGGAAACAACATGAAAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CAA 90 bp ACCTGGAGCAGAGAAGCGAAGTGGAGTAAGCATCCTTTACTTTTATGGCAAAAAAAGCACCCAACAGAATaGGCCTTGGGACGTCCCTAT +
Preference number: 5 (lower is better)
Translates to: TWSREAKWSKHPLLLWQKKHPTE*ALGRPY
Trigger: ATAGGGACGTCCCAAGGCCAATTCTGTTGGGTGCTT...TTTTTGCCATAAAAGTAAAGGATGCTTACTCCACTTCGCTTCTCTGCTCCAGGT
47% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CAA 90 bp CAGGCAGTGGAAGAAAAGACATGTAGGTTGTACAGGCTAGCAAAGCCCAAGAAGGGAACCATTTGCATTTaGGTGGTAAATCAGCTGCAC +
Preference number: 5 (lower is better)
Translates to: QAVEEKTCRLYRLAKPKKGTICI*VVNQLH
Trigger: GTGCAGCTGATTTACCACCAAAATGCAAATGGTTCC...CTTCTTGGGCTTTGCTAGCCTGTACAACCTACATGTCTTTTCTTCCACTGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS GCA 90 bp CATTCAGTCCTAGATTTCCAATGTCCACGTATTTACAGAAGAGACTaGGTCGGTCTCTTACATTTCTATAGAGAAGGGCTTAGGGGCTGC +
Preference number: 5 (lower is better)
Translates to: HSVLDFQCPRIYRRD*VGLLHFYREGLRGC
Trigger: GCAGCCCCTAAGCCCTTCTCTATAGAAATGTAAGAGACCGACGCAGTCTCTTCTGTAAATACGTGGACATTGGAAATCTAGGACTGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392744.4
CDS GCA 90 bp CTTCCTGATTCTAAGCTCAGAACAAATCCTCCGTTGAGGAAAACTTaGTATTCTGCACCCTTGCCCCCACTCTTCCCAGTACAAACAAAA +
Preference number: 5 (lower is better)
Translates to: LPDSKLRTNPPLRKT*YSAPLPPLFPVQTK
Trigger: TTTTGTTTGTACTGGGAAGAGTGGGGGCAAGGGTGCAGAATAGCAAGTTTTCCTCAACGGAGGATTTGTTCTGAGCTTAGAATCAGGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392744.4
CDS-3UTR CAA 90 bp CTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACATTTTCTTTCTCGTAGTTCAAAGTaGCAGACACACCAGCCACAA +
Preference number: 5 (lower is better)
Translates to: LESVCHYSAPITRKSHFLSRSSK*QTHQPQ
Trigger: TTGTGGCTGGTGTGTCTGCAACTTTGAACTACGAGA...AAGAAAATGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR CAA 90 bp CTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACATTTTCTTGTGCGGGCCTTCATCTaGTCTTGTAATTCTGCTACA +
Preference number: 5 (lower is better)
Translates to: LESVCHYSAPITRKSHFLVRAFI*SCNSAT
Trigger: TGTAGCAGAATTACAAGACAAGATGAAGGCCCGCAC...AAGAAAATGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR CAA 90 bp TCTCTCTCCAACAGTTATAGTTCAACCCAAGTCTTTCAGGCAGTGGAAGAAAAGTGGAGGTTACCCACATaGCAAGAGAAGACATCCCTG +
Preference number: 5 (lower is better)
Translates to: SLSNSYSSTQVFQAVEEKWRLPT*QEKTSL
Trigger: CAGGGATGTCTTCTCTTGCAATGTGGGTAACCTCCA...CTTTTCTTCCACTGCCTGAAAGACTTGGGTTGAACTATAACTGTTGGAGAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CAA 90 bp GCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACATTTTGATAGAAACTCACCATaGCAGATGGATCTCCCATCA +
Preference number: 5 (lower is better)
Translates to: ALESVCHYSAPITRKSHFDRNSP*QMDLPS
Trigger: TGATGGGAGATCCATCTGCAATGGTGAGTTTCTATC...AAAATGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR CAA 90 bp GCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACATTTTACTCTCCACAGGTATTaGATGGTTGATCTTCTGGGA +
Preference number: 5 (lower is better)
Translates to: ALESVCHYSAPITRKSHFTLHRY*MVDLLG
Trigger: TCCCAGAAGATCAACCATCAAATACCTGTGGAGAGT...AAAATGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR CAA 90 bp AAAAGAAGTCAGCCTACAACAGAAGATAGAGGGTCAGGATACCATGGGAACAGTAAAATCAGTGTTTCCTaGGCTGCCTGTATTCGCAGC +
Preference number: 5 (lower is better)
Translates to: KRSQPTTEDRGSGYHGNSKISVS*AACIRS
Trigger: GCTGCGAATACAGGCAGCCAAGGAAACACTGATTTT...ACTGTTCCCATGGTATCCTGACCCTCTATCTTCTGTTGTAGGCTGACTTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456829.7
CDS-3UTR CAA 90 bp ACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACATTTTCTAGCCTCCTCCATTGTTaGCTGAGTGTACTTCACACT +
Preference number: 5 (lower is better)
Translates to: TRVCVSLLSTNHPEITFSSLLHC*LSVLHT
Trigger: AGTGTGAAGTACACTCAGCAAACAATGGAGGAGGCT...AGAAAATGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR CAA 90 bp TCTGGGACCACTGTCACTTTTCTGAGGGCATATGTTGGGAAAAGAAAGATCATATTCAAGTCCTTACCATaGCTGTGCAGCCAGATCACG +
Preference number: 5 (lower is better)
Translates to: SGTTVTFLRAYVGKRKIIFKSLP*LCSQIT
Trigger: CGTGATCTGGCTGCACAGCAATGGTAAGGACTTGAA...TATGATCTTTCTTTTCCCAACATATGCCCTCAGAAAAGTGACAGTGGTCCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CAA 90 bp ATTACATTGATCCAGATGTTGGCTTTCAACTTCCCTCTAACTCCTCCTACGCAATTCAAGTCCTTACCATaGCTGTGCAGCCAGATCACG +
Preference number: 5 (lower is better)
Translates to: ITLIQMLAFNFPLTPPTQFKSLP*LCSQIT
Trigger: CGTGATCTGGCTGCACAGCAATGGTAAGGACTTGAA...TTGCGTAGGAGGAGTTAGAGGGAAGTTGAAAGCCAACATCTGGATCAATGTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CAA 90 bp GTATATGAGACACAAGGGTCAGGAACGATTACGGGGAGCTCCTTTCTTCCTAATCTGCCTATGAATGTTTaGAACTCCCTCAAGAAAGGG +
Preference number: 5 (lower is better)
Translates to: VYETQGSGTITGSSFLPNLPMNV*NSLKKG
Trigger: CCCTTTCTTGAGGGAGTTCAAAACATTCATAGGCAG...ATTAGGAAGAAAGGAGCTCCCCGTAATCGTTCCTGACCCTTGTGTCTCATATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CAA 90 bp CAGGCAGTGGAAGAAAAGACATGTAGGTTGTACAGGCTAGCAAAGCCCAAGAAGACATTGATCCAGATGTaGGCTTTCAACTTCCCTCTA +
Preference number: 5 (lower is better)
Translates to: QAVEEKTCRLYRLAKPKKTLIQM*AFNFPL
Trigger: TAGAGGGAAGTTGAAAGCCAACATCTGGATCAATGT...CTTCTTGGGCTTTGCTAGCCTGTACAACCTACATGTCTTTTCTTCCACTGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS GCA 90 bp AGGGTGAGTAGGCCACAGAAGTGCACCATGGTGATGCAAGATTTCTaGAGAAAAGACATATCACAAACAGAGGACATGTTGGAAGTTATC +
Preference number: 5 (lower is better)
Translates to: RVSRPQKCTMVMQDF*RKDISQTEDMLEVI
Trigger: GATAACTTCCAACATGTCCTCTGTTTGTGATATGTCTTTTCTGCAGAAATCTTGCATCACCATGGTGCACTTCTGTGGCCTACTCACCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392744.4
CDS-3UTR CAA 90 bp GACCACTGTCACTTTTCTGAGGGCATATGTTGGGAAAAGAAAGATCATATCCAATGGAGGTTACCCACATaGCAAGAGAAGACATCCCTG +
Preference number: 5 (lower is better)
Translates to: DHCHFSEGICWEKKDHIQWRLPT*QEKTSL
Trigger: CAGGGATGTCTTCTCTTGCAATGTGGGTAACCTCCA...TTGGATATGATCTTTCTTTTCCCAACATATGCCCTCAGAAAAGTGACAGTGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CAA 90 bp AGTCTCTGTCTTTGTGATCTTGACATTACATTGATCCAGATGTTGGCTTTCAACGGACTCAAGGGGCAGTaGGATTGGACCTTCTCAATG +
Preference number: 5 (lower is better)
Translates to: SLCLCDLDITLIQMLAFNGLKGQ*DWTFSM
Trigger: CATTGAGAAGGTCCAATCCAACTGCCCCTTGAGTCC...GTTGAAAGCCAACATCTGGATCAATGTAATGTCAAGATCACAAAGACAGAGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CAA 90 bp TGTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACAGATCTTCTGGGATATTaGGATAGAAACTCACCATTG +
Preference number: 5 (lower is better)
Translates to: CSTRVCVSLLSTNHPEITDLLGY*DRNSPL
Trigger: CAATGGTGAGTTTCTATCCAAATATCCCAGAAGATC...TGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR CAA 90 bp TCATGTAGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCCAAACAGAGGACATGTaGGAAGTTATCTGTTCAAAC +
Preference number: 5 (lower is better)
Translates to: SCSTRVCVSLLSTNHPEIQTEDM*EVICSN
Trigger: GTTTGAACAGATAACTTCCAACATGTCCTCTGTTTG...GATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCTACATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392744.4
CDS-3UTR CAA 90 bp CAGGCAGTGGAAGAAAAGACATGTAGGTTGTACAGGCTAGCAAAGCCCAAGAAGTTATCCTCAAAAGTCTaGCCCTGGAGTGTATATTTG +
Preference number: 5 (lower is better)
Translates to: QAVEEKTCRLYRLAKPKKLSSKV*PWSVYL
Trigger: CAAATATACACTCCAGGGCAAGACTTTTGAGGATAA...CTTCTTGGGCTTTGCTAGCCTGTACAACCTACATGTCTTTTCTTCCACTGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS TCA 90 bp ACTTCCCGAGCGGTCCATGAGAAAGATAAACTCTCCACAGGTATTTaGTGGTTGATCTTCTGGGATATTTGGATAGAAACTCACCATTGC +
Preference number: 5 (lower is better)
Translates to: TSRAVHEKDKLSTGI*WLIFWDIWIETHHC
Trigger: GCAATGGTGAGTTTCTATCCAAATATCCCAGAAGATCAACCATCAAATACCTGTGGAGAGTTTATCTTTCTCATGGACCGCTCGGGAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000392748.5
ENST00000449321.5
ENST00000456829.7
CDS TCA 90 bp TTCTGGATGGTATCTTCAAAAGGCAAAGATAGCAGGATCCACAGATaGCTTCAGGAAAGTAATAGCAGCTTTCACAACCGAAGGCATGGT +
Preference number: 5 (lower is better)
Translates to: FWMVSSKGKDSRIHR*LQESNSSFHNRRHG
Trigger: ACCATGCCTTCGGTTGTGAAAGCTGCTATTACTTTCCTGAAGTCATCTGTGGATCCTGCTATCTTTGCCTTTTGAAGATACCATCCAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS CCA 90 bp CAGGCTGTGCAGCCATTATTTCTTCCAAACTCATACCTAGGATCTTaGCTAGATCTTCATTCAGATCCCAGGAACCATTTGCATTTTGGT +
Preference number: 5 (lower is better)
Translates to: QAVQPLFLPNSYLGS*LDLHSDPRNHLHFG
Trigger: ACCAAAATGCAAATGGTTCCTGGGATCTGAATGAAGATCTAGCCAAGATCCTAGGTATGAGTTTGGAAGAAATAATGGCTGCACAGCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CAA 90 bp AGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACATTTGATCTTCTGGGATATTaGGATAGAAACTCACCATTG +
Preference number: 5 (lower is better)
Translates to: STRVCVSLLSTNHPEITFDLLGY*DRNSPL
Trigger: CAATGGTGAGTTTCTATCCAAATATCCCAGAAGATC...AAATGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR CAA 90 bp AGCACTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACATTTAGAACAAATCCTCCGTaGAGGAAAACTTGCTATTCT +
Preference number: 5 (lower is better)
Translates to: STRVCVSLLSTNHPEITFRTNPP*RKTCYS
Trigger: AGAATAGCAAGTTTTCCTCAACGGAGGATTTGTTCT...AAATGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392744.4
CDS-3UTR CAA 90 bp TCTCTCTCCAACAGTTATAGTTCAACCCAAGTCTTTCAGGCAGTGGAAGAAAAGGACTGCATCCTGTCTTaGCCTGTGATAAATTCTGAG +
Preference number: 5 (lower is better)
Translates to: SLSNSYSSTQVFQAVEEKDCILS*PVINSE
Trigger: CTCAGAATTTATCACAGGCAAAGACAGGATGCAGTC...CTTTTCTTCCACTGCCTGAAAGACTTGGGTTGAACTATAACTGTTGGAGAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CAA 90 bp TGTTTTTCATGTTGTTTCCCTGGAAACCCTGGGAGGAACATTACTGCCTATGAAGACTGCATCCTGTCTTaGCCTGTGATAAATTCTGAG +
Preference number: 5 (lower is better)
Translates to: CFSCCFPGNPGRNITAYEDCILS*PVINSE
Trigger: CTCAGAATTTATCACAGGCAAAGACAGGATGCAGTC...TTCATAGGCAGTAATGTTCCTCCCAGGGTTTCCAGGGAAACAACATGAAAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CAA 90 bp GACAGCATATCAAATAGGGTCATTTCCACCAGGATAGGGTATATGAGACACAAGCCCTGGAGTGTATATTaGAGGCATACTTCTCCTGTT +
Preference number: 5 (lower is better)
Translates to: DSISNRVISTRIGYMRHKPWSVY*RHTSPV
Trigger: AACAGGAGAAGTATGCCTCAAATATACACTCCAGGG...CTTGTGTCTCATATACCCTATCCTGGTGGAAATGACCCTATTTGATATGCTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CAA 90 bp ATTACATTGATCCAGATGTTGGCTTTCAACTTCCCTCTAACTCCTCCTACGCAAGGAACCATTTGCATTTaGGTGGTAAATCAGCTGCAC +
Preference number: 5 (lower is better)
Translates to: ITLIQMLAFNFPLTPPTQGTICI*VVNQLH
Trigger: GTGCAGCTGATTTACCACCAAAATGCAAATGGTTCC...TTGCGTAGGAGGAGTTAGAGGGAAGTTGAAAGCCAACATCTGGATCAATGTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CAA 90 bp GCAGTGGAAGAAAAGACATGTAGGTTGTACAGGCTAGCAAAGCCCAAGAAGAATGATCCCAGGAACCATTaGCATTTTGGTGGTAAATCA +
Preference number: 5 (lower is better)
Translates to: AVEEKTCRLYRLAKPKKNDPRNH*HFGGKS
Trigger: TGATTTACCACCAAAATGCAAATGGTTCCTGGGATC...ATTCTTCTTGGGCTTTGCTAGCCTGTACAACCTACATGTCTTTTCTTCCACTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CAA 90 bp CAAGTTATTTTAAGGGACAGCATATCAAATAGGGTCATTTCCACCAGGATAGGGGAAAAGACATGTAGGTaGTACAGGCTAGCAAAGCCC +
Preference number: 5 (lower is better)
Translates to: QVILRDSISNRVISTRIGEKTCR*YRLAKP
Trigger: GGGCTTTGCTAGCCTGTACAACCTACATGTCTTTTC...CCCTATCCTGGTGGAAATGACCCTATTTGATATGCTGTCCCTTAAAATAACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CAA 90 bp CTAGAGTCTGTGTGTCACTACTCAGCACCAATCACCCGGAAATCACATTTTCTTGATCTTCTGGGATATTaGGATAGAAACTCACCATTG +
Preference number: 5 (lower is better)
Translates to: LESVCHYSAPITRKSHFLDLLGY*DRNSPL
Trigger: CAATGGTGAGTTTCTATCCAAATATCCCAGAAGATC...AAGAAAATGTGATTTCCGGGTGATTGGTGCTGAGTAGTGACACACAGACTCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000449321.5
CDS-3UTR CAA 90 bp GCAGTGGAAGAAAAGACATGTAGGTTGTACAGGCTAGCAAAGCCCAAGAAGAATGATCTTCTGGGATATTaGGATAGAAACTCACCATTG +
Preference number: 5 (lower is better)
Translates to: AVEEKTCRLYRLAKPKKNDLLGY*DRNSPL
Trigger: CAATGGTGAGTTTCTATCCAAATATCCCAGAAGATC...ATTCTTCTTGGGCTTTGCTAGCCTGTACAACCTACATGTCTTTTCTTCCACTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CAA 90 bp CAAGTTATTTTAAGGGACAGCATATCAAATAGGGTCATTTCCACCAGGATAGGGCCCTGGAGTGTATATTaGAGGCATACTTCTCCTGTT +
Preference number: 5 (lower is better)
Translates to: QVILRDSISNRVISTRIGPWSVY*RHTSPV
Trigger: AACAGGAGAAGTATGCCTCAAATATACACTCCAGGG...CCCTATCCTGGTGGAAATGACCCTATTTGATATGCTGTCCCTTAAAATAACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CAA 90 bp ATTAAAGAGGAACATCTCTCTCCAACAGTTATAGTTCAACCCAAGTCTTTCAGGAGGTTGACATCAGGCTaGGGTTGTAGAGGAAATGTC +
Preference number: 5 (lower is better)
Translates to: IKEEHLSPTVIVQPKSFRRLTSG*GCRGNV
Trigger: GACATTTCCTCTACAACCCAAGCCTGATGTCAACCT...CCTGAAAGACTTGGGTTGAACTATAACTGTTGGAGAGAGATGTTCCTCTTTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CAA 90 bp TCTGGGACCACTGTCACTTTTCTGAGGGCATATGTTGGGAAAAGAAAGATCATAGATCCCAGGAACCATTaGCATTTTGGTGGTAAATCA +
Preference number: 5 (lower is better)
Translates to: SGTTVTFLRAYVGKRKIIDPRNH*HFGGKS
Trigger: TGATTTACCACCAAAATGCAAATGGTTCCTGGGATC...TATGATCTTTCTTTTCCCAACATATGCCCTCAGAAAAGTGACAGTGGTCCCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CAA 90 bp GACCACTGTCACTTTTCTGAGGGCATATGTTGGGAAAAGAAAGATCATATCCAACTGCCTATGAATGTTTaGAACTCCCTCAAGAAAGGG +
Preference number: 5 (lower is better)
Translates to: DHCHFSEGICWEKKDHIQLPMNV*NSLKKG
Trigger: CCCTTTCTTGAGGGAGTTCAAAACATTCATAGGCAG...TTGGATATGATCTTTCTTTTCCCAACATATGCCCTCAGAAAAGTGACAGTGGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CAA 90 bp ACCACTGTCACTTTTCTGAGGGCATATGTTGGGAAAAGAAAGATCATATCCAAAGAAAAGACATGTAGGTaGTACAGGCTAGCAAAGCCC +
Preference number: 5 (lower is better)
Translates to: TTVTFLRAYVGKRKIISKEKTCR*YRLAKP
Trigger: GGGCTTTGCTAGCCTGTACAACCTACATGTCTTTTC...TTTGGATATGATCTTTCTTTTCCCAACATATGCCCTCAGAAAAGTGACAGTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CAA 90 bp ACCACTGTCACTTTTCTGAGGGCATATGTTGGGAAAAGAAAGATCATATCCAAAACTCTCCACAGGTATTaGATGGTTGATCTTCTGGGA +
Preference number: 5 (lower is better)
Translates to: TTVTFLRAYVGKRKIISKTLHRY*MVDLLG
Trigger: TCCCAGAAGATCAACCATCAAATACCTGTGGAGAGT...TTTGGATATGATCTTTCTTTTCCCAACATATGCCCTCAGAAAAGTGACAGTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CAA 90 bp GACAGCATATCAAATAGGGTCATTTCCACCAGGATAGGGTATATGAGACACAAGTTATCCTCAAAAGTCTaGCCCTGGAGTGTATATTTG +
Preference number: 5 (lower is better)
Translates to: DSISNRVISTRIGYMRHKLSSKV*PWSVYL
Trigger: CAAATATACACTCCAGGGCAAGACTTTTGAGGATAA...CTTGTGTCTCATATACCCTATCCTGGTGGAAATGACCCTATTTGATATGCTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CAA 90 bp ACCTGGAGCAGAGAAGCGAAGTGGAGTAAGCATCCTTTACTTTTATGGCAAAAATTGTTGAGCTCCTTATaGATAGCAATGAAAGCTGTG +
Preference number: 5 (lower is better)
Translates to: TWSREAKWSKHPLLLWQKLLSSL*IAMKAV
Trigger: CACAGCTTTCATTGCTATCAATAAGGAGCTCAACAA...TTTTTGCCATAAAAGTAAAGGATGCTTACTCCACTTCGCTTCTCTGCTCCAGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CAA 90 bp AGTCACCGATGTTCCTCTAGGAATTCTGAGTGGAACTCGAAAGTGTTAATAAAGCTCATACCTAGGATCTaGGCTAGATCTTCATTCAGA +
Preference number: 5 (lower is better)
Translates to: SHRCSSRNSEWNSKVLIKLIPRI*ARSSFR
Trigger: TCTGAATGAAGATCTAGCCAAGATCCTAGGTATGAG...CTTTATTAACACTTTCGAGTTCCACTCAGAATTCCTAGAGGAACATCGGTGACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456829.7
CDS-3UTR CAA 90 bp GAAGAAAAGACATGTAGGTTGTACAGGCTAGCAAAGCCCAAGAAGAATGAATCATTGTTGAGCTCCTTATaGATAGCAATGAAAGCTGTG +
Preference number: 5 (lower is better)
Translates to: EEKTCRLYRLAKPKKNESLLSSL*IAMKAV
Trigger: CACAGCTTTCATTGCTATCAATAAGGAGCTCAACAA...TGATTCATTCTTCTTGGGCTTTGCTAGCCTGTACAACCTACATGTCTTTTCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS-3UTR CAA 90 bp ATTAAAGAGGAACATCTCTCTCCAACAGTTATAGTTCAACCCAAGTCTTTCAGGACATTGATCCAGATGTaGGCTTTCAACTTCCCTCTA +
Preference number: 5 (lower is better)
Translates to: IKEEHLSPTVIVQPKSFRTLIQM*AFNFPL
Trigger: TAGAGGGAAGTTGAAAGCCAACATCTGGATCAATGT...CCTGAAAGACTTGGGTTGAACTATAACTGTTGGAGAGAGATGTTCCTCTTTAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS TCA 90 bp GCAGAGCGACTGTGTGATTGGTCTTGTCTAATCACAGCTATACTCTaGATGCCTCTGATTGATTTCTTTCCCCAAATGATTTTAGAAAAA +
Preference number: 5 (lower is better)
Translates to: AERLCDWSCLITAIL*MPLIDFFPQMILEK
Trigger: TTTTTCTAAAATCATTTGGGGAAAGAAATCAATCAGAGGCATTCAGAGTATAGCTGTGATTAGACAAGACCAATCACACAGTCGCTCTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533623.1
CDS CCA 90 bp TGCAAGATTTCTGCAGAAAAGACATATCACAAACAGAGGACATGTTaGAAGTTATCTGTTCAAACACCAGTACTTTATGTGCCTTTCTCT +
Preference number: 5 (lower is better)
Translates to: CKISAEKTYHKQRTC*KLSVQTPVLYVPFS
Trigger: AGAGAAAGGCACATAAAGTACTGGTGTTTGAACAGATAACTTCCAACATGTCCTCTGTTTGTGATATGTCTTTTCTGCAGAAATCTTGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392744.4
CDS CAA 72 bp AGAGCAGGGGTTGGATCCAGGCCCTGCACCGGTAGCTaGGTCCCCTACCTTCCTCTCCTGCAGCCCGGAGCG +
Preference number: 6 (lower is better)
Translates to: RAGVGSRPCTGS*VPYLPLLQPGA
Trigger: CGCTCCGGGCTGCAGGAGAGGAAGGTAGGGGACCAAGCTACCGGTGCAGGGCCTGGATCCAACCCCTGCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392744.4
CDS TCA 72 bp GTGCAGCCAGATCACGGCCAGGATGGTGGCCCAGCCTaGGGAATCCACAAGCTCGGCAGGCTGTGCAGCCAT +
Preference number: 6 (lower is better)
Translates to: VQPDHGQDGGPA*GIHKLGRLCSH
Trigger: ATGGCTGCACAGCCTGCCGAGCTTGTGGATTCCTCAGGCTGGGCCACCATCCTGGCCGTGATCTGGCTGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS GCA 72 bp TCTCAGTCTTCCAGAGCAGGGGTTGGATCCAGGCCCTaGACCGGTAGCTTGGTCCCCTACCTTCCTCTCCTG +
Preference number: 6 (lower is better)
Translates to: SQSSRAGVGSRP*TGSLVPYLPLL
Trigger: CAGGAGAGGAAGGTAGGGGACCAAGCTACCGGTGCAGGGCCTGGATCCAACCCCTGCTCTGGAAGACTGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392744.4
CDS CCA 72 bp CCTTACCATTGCTGTGCAGCCAGATCACGGCCAGGATaGTGGCCCAGCCTGAGGAATCCACAAGCTCGGCAG +
Preference number: 6 (lower is better)
Translates to: PYHCCAARSRPG*WPSLRNPQARQ
Trigger: CTGCCGAGCTTGTGGATTCCTCAGGCTGGGCCACCATCCTGGCCGTGATCTGGCTGCACAGCAATGGTAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS TCA 72 bp CTGCTTCCAGAGGCAGCTCCTGCACATACTTCAGGGTaGCTGCCGCCTTCGACCCAGGTTGGAGGTTACCCA +
Preference number: 6 (lower is better)
Translates to: LLPEAAPAHTSG*LPPSTQVGGYP
Trigger: TGGGTAACCTCCAACCTGGGTCGAAGGCGGCAGTCACCCTGAAGTATGTGCAGGAGCTGCCTCTGGAAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000392748.5
ENST00000449321.5
ENST00000456829.7
CDS CCA 72 bp CTTCAATGGGGCAGAAGCACCCAACAGAATTGGCCTTaGGACGTCCCTATGAGCCAGAGGCCCCTGAACCGG +
Preference number: 6 (lower is better)
Translates to: LQWGRSTQQNWP*DVPMSQRPLNR
Trigger: CCGGTTCAGGGGCCTCTGGCTCATAGGGACGTCCCAAGGCCAATTCTGTTGGGTGCTTCTGCCCCATTGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS CAA 72 bp CTAGAATGTGGAGCTCTCAGTCTTCCAGAGCAGGGGTaGGATCCAGGCCCTGCACCGGTAGCTTGGTCCCCT +
Preference number: 6 (lower is better)
Translates to: LECGALSLPEQG*DPGPAPVAWSP
Trigger: AGGGGACCAAGCTACCGGTGCAGGGCCTGGATCCAACCCCTGCTCTGGAAGACTGAGAGCTCCACATTCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392744.4
CDS CAA 90 bp GAAAGGGAGCTAGAATGTGGAGCTCTCAGTCTTCCAGAGCAGGGGTaGGATCCAGGCCCTGCACCGGTAGCTTGGTCCCCTACCTTCCTC +
Preference number: 6 (lower is better)
Translates to: ERELECGALSLPEQG*DPGPAPVAWSPTFL
Trigger: GAGGAAGGTAGGGGACCAAGCTACCGGTGCAGGGCCTGGATCCAACCCCTGCTCTGGAAGACTGAGAGCTCCACATTCTAGCTCCCTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392744.4
CDS CAA 72 bp TCTTCAATGGGGCAGAAGCACCCAACAGAATTGGCCTaGGGACGTCCCTATGAGCCAGAGGCCCCTGAACCG +
Preference number: 6 (lower is better)
Translates to: SSMGQKHPTELA*GRPYEPEAPEP
Trigger: CGGTTCAGGGGCCTCTGGCTCATAGGGACGTCCCAAGGCCAATTCTGTTGGGTGCTTCTGCCCCATTGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS GCA 72 bp CCAGAAGCTCCCATTCACACTTCAAGTCCTTACCATTaGTGTGCAGCCAGATCACGGCCAGGATGGTGGCCC +
Preference number: 6 (lower is better)
Translates to: PEAPIHTSSPYH*CAARSRPGWWP
Trigger: GGGCCACCATCCTGGCCGTGATCTGGCTGCACAGCAATGGTAAGGACTTGAAGTGTGAATGGGAGCTTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS CCA 72 bp CCCCCTCCAATAAGAAGGCCTGGTGGCCCTGGGAGATaGCTTTCTCATAGTTGGTGCGGGCCTTCATCTTGT +
Preference number: 6 (lower is better)
Translates to: PPPIRRPGGPGR*LSHSWCGPSSC
Trigger: ACAAGATGAAGGCCCGCACCAACTATGAGAAAGCCATCTCCCAGGGCCACCAGGCCTTCTTATTGGAGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000392748.5
ENST00000449321.5
ENST00000456829.7
CDS CCA 72 bp CGACCCAGAGAACTGGTATCTAGGATTCAGGACAGCTaGGAGCACAAAGCGCAGAGCCCCATCTGCTTCCAG +
Preference number: 6 (lower is better)
Translates to: RPRELVSRIQDS*EHKAQSPICFQ
Trigger: CTGGAAGCAGATGGGGCTCTGCGCTTTGTGCTCCCAGCTGTCCTGAATCCTAGATACCAGTTCTCTGGGTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000392748.5
ENST00000449321.5
ENST00000456829.7
CDS CAA 72 bp TCCAGAAGCTCCCATTCACACTTCAAGTCCTTACCATaGCTGTGCAGCCAGATCACGGCCAGGATGGTGGCC +
Preference number: 6 (lower is better)
Translates to: SRSSHSHFKSLP*LCSQITARMVA
Trigger: GGCCACCATCCTGGCCGTGATCTGGCTGCACAGCAATGGTAAGGACTTGAAGTGTGAATGGGAGCTTCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS GCA 72 bp CTCAAGGGGCAGTTGGATTGGACCTTCTCAATGCCATaGTGGGAATCTATGGTGGCGACCATGCTGAGTGTG +
Preference number: 6 (lower is better)
Translates to: LKGQLDWTFSMP*WESMVATMLSV
Trigger: CACACTCAGCATGGTCGCCACCATAGATTCCCAGCATGGCATTGAGAAGGTCCAATCCAACTGCCCCTTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000392748.5
ENST00000449321.5
ENST00000456829.7
CDS GCA 72 bp ACTGGCTCCCGGTGGAGGGTGAGTAGGCCACAGAAGTaGACCATGGTGATGCAAGATTTCTGCAGAAAAGAC +
Preference number: 6 (lower is better)
Translates to: TGSRWRVSRPQK*TMVMQDFCRKD
Trigger: GTCTTTTCTGCAGAAATCTTGCATCACCATGGTGCACTTCTGTGGCCTACTCACCCTCCACCGGGAGCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392744.4
CDS CAA 90 bp GAAGTCTTGTCCTCTCCTAGGTACTCGGTAGGACTCAAGGGGCAGTaGGATTGGACCTTCTCAATGCCATGCTGGGAATCTATGGTGGCG +
Preference number: 6 (lower is better)
Translates to: EVLSSPRYSVGLKGQ*DWTFSMPCWESMVA
Trigger: CGCCACCATAGATTCCCAGCATGGCATTGAGAAGGTCCAATCCAACTGCCCCTTGAGTCCTACCGAGTACCTAGGAGAGGACAAGACTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000392748.5
ENST00000449321.5
ENST00000456829.7
CDS CAA 90 bp GTCGGCCTGCATAAGCTTCACTCTCCCCAGAGCCTCCTCCATTGTTaGCTGAGTGTACTTCACACTCTCCGGAAAGCATGCCTCATAGGA +
Preference number: 6 (lower is better)
Translates to: VGLHKLHSPQSLLHC*LSVLHTLRKACLIG
Trigger: TCCTATGAGGCATGCTTTCCGGAGAGTGTGAAGTACACTCAGCAAACAATGGAGGAGGCTCTGGGGAGAGTGAAGCTTATGCAGGCCGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000392748.5
ENST00000449321.5
ENST00000456829.7
CDS TCA 72 bp AGCTTCACTCTCCCCAGAGCCTCCTCCATTGTTTGCTaGGTGTACTTCACACTCTCCGGAAAGCATGCCTCA +
Preference number: 6 (lower is better)
Translates to: SFTLPRASSIVC*VYFTLSGKHAS
Trigger: TGAGGCATGCTTTCCGGAGAGTGTGAAGTACACTCAGCAAACAATGGAGGAGGCTCTGGGGAGAGTGAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000392748.5
ENST00000449321.5
ENST00000456829.7
CDS CCA 72 bp CCTAGGTACTCGGTAGGACTCAAGGGGCAGTTGGATTaGACCTTCTCAATGCCATGCTGGGAATCTATGGTG +
Preference number: 6 (lower is better)
Translates to: PRYSVGLKGQLD*TFSMPCWESMV
Trigger: CACCATAGATTCCCAGCATGGCATTGAGAAGGTCCAATCCAACTGCCCCTTGAGTCCTACCGAGTACCTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000392748.5
ENST00000449321.5
ENST00000456829.7
CDS CCA 72 bp GCGTGCAATTCAAGGAGCCCCTACAAATTTGGGGACTaGGGAAAGGGAGCTAGAATGTGGAGCTCTCAGTCT +
Preference number: 6 (lower is better)
Translates to: ACNSRSPYKFGD*GKGARMWSSQS
Trigger: AGACTGAGAGCTCCACATTCTAGCTCCCTTTCCCCAGTCCCCAAATTTGTAGGGGCTCCTTGAATTGCACGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392744.4
CDS CAA 72 bp TCCTCTCCTAGGTACTCGGTAGGACTCAAGGGGCAGTaGGATTGGACCTTCTCAATGCCATGCTGGGAATCT +
Preference number: 6 (lower is better)
Translates to: SSPRYSVGLKGQ*DWTFSMPCWES
Trigger: AGATTCCCAGCATGGCATTGAGAAGGTCCAATCCAACTGCCCCTTGAGTCCTACCGAGTACCTAGGAGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000392748.5
ENST00000449321.5
ENST00000456829.7
CDS TCA 72 bp ACTTGCAGGAACCTTCCTGGGGATCATACATCAGGATaGAATCCTCCACCCATGGGGCGTGCAATTCAAGGA +
Preference number: 6 (lower is better)
Translates to: TCRNLPGDHTSG*NPPPMGRAIQG
Trigger: TCCTTGAATTGCACGCCCCATGGGTGGAGGATTTCATCCTGATGTATGATCCCCAGGAAGGTTCCTGCAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392744.4
CDS CCA 72 bp CTGGGGATCATACATCAGGATGAAATCCTCCACCCATaGGGCGTGCAATTCAAGGAGCCCCTACAAATTTGG +
Preference number: 6 (lower is better)
Translates to: LGIIHQDEILHP*GVQFKEPLQIW
Trigger: CCAAATTTGTAGGGGCTCCTTGAATTGCACGCCCCATGGGTGGAGGATTTCATCCTGATGTATGATCCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392744.4
CDS CCA 72 bp CCCCTGATGCCCGGGCAATACCTTTTATTAGGCTGGTaGAGGTGCCTTCTCCAATACCAAATGAGAAACACC +
Preference number: 6 (lower is better)
Translates to: PLMPGQYLLLGW*RCLLQYQMRNT
Trigger: GGTGTTTCTCATTTGGTATTGGAGAAGGCACCTCCACCAGCCTAATAAAAGGTATTGCCCGGGCATCAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS CCA 72 bp TGCCCCCTGATGCCCGGGCAATACCTTTTATTAGGCTaGTGGAGGTGCCTTCTCCAATACCAAATGAGAAAC +
Preference number: 6 (lower is better)
Translates to: CPLMPGQYLLLG*WRCLLQYQMRN
Trigger: GTTTCTCATTTGGTATTGGAGAAGGCACCTCCACCAGCCTAATAAAAGGTATTGCCCGGGCATCAGGGGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS CAA 90 bp GGAAATGTCACCTTATCCTCAAAAGTCTTGCCCTGGAGTGTATATTaGAGGCATACTTCTCCTGTTGTCTCTGCTGCTGGCATCCTCCCG +
Preference number: 6 (lower is better)
Translates to: GNVTLSSKVLPWSVY*RHTSPVVSAAGILP
Trigger: CGGGAGGATGCCAGCAGCAGAGACAACAGGAGAAGTATGCCTCAAATATACACTCCAGGGCAAGACTTTTGAGGATAAGGTGACATTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS TCA 72 bp AAAATCAGTGTTTCCTTGGCTGCCTGTATTCGCAGCTaGGATGTATCCTGGCTACTCATGGGGCTCTGCATA +
Preference number: 6 (lower is better)
Translates to: KISVSLAACIRS*DVSWLLMGLCI
Trigger: TATGCAGAGCCCCATGAGTAGCCAGGATACATCTCAGCTGCGAATACAGGCAGCCAAGGAAACACTGATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000392748.5
ENST00000449321.5
ENST00000456829.7
CDS TCA 72 bp GAGAAGGGCTTAGGGGCTGCAACTGATTGGAGTAGATaGGGCTTACAGCCTCATTTCCTCAGCTTACACTAT +
Preference number: 6 (lower is better)
Translates to: EKGLGAATDWSR*GLQPHFLSLHY
Trigger: ATAGTGTAAGCTGAGGAAATGAGGCTGTAAGCCTCATCTACTCCAATCAGTTGCAGCCCCTAAGCCCTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392744.4
CDS CCA 72 bp GATTCCCCTAAACTGCCAAACTTGCAGGAACCTTCCTaGGGATCATACATCAGGATGAAATCCTCCACCCAT +
Preference number: 6 (lower is better)
Translates to: DSPKLPNLQEPS*GSYIRMKSSTH
Trigger: ATGGGTGGAGGATTTCATCCTGATGTATGATCCCCAGGAAGGTTCCTGCAAGTTTGGCAGTTTAGGGGAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392744.4
CDS CAA 90 bp AGAAGGCCTCCAAAGGAACTTTCTCCTCATTCTCGTAGTTCAAAGTaGCAGACACACCAGCCACAAACTCGTAAATGTTCACGCTCACAG +
Preference number: 6 (lower is better)
Translates to: RRPPKELSPHSRSSK*QTHQPQTRKCSRSQ
Trigger: CTGTGAGCGTGAACATTTACGAGTTTGTGGCTGGTGTGTCTGCAACTTTGAACTACGAGAATGAGGAGAAAGTTCCTTTGGAGGCCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000392748.5
ENST00000449321.5
ENST00000456829.7
ENST00000533623.1
CDS TCA 72 bp CCTTATCCTCAAAAGTCTTGCCCTGGAGTGTATATTTaGGGCATACTTCTCCTGTTGTCTCTGCTGCTGGCA +
Preference number: 6 (lower is better)
Translates to: PYPQKSCPGVYI*GILLLLSLLLA
Trigger: TGCCAGCAGCAGAGACAACAGGAGAAGTATGCCTCAAATATACACTCCAGGGCAAGACTTTTGAGGATAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS GCA 72 bp CAGAACAAATCCTCCGTTGAGGAAAACTTGCTATTCTaGACCCTTGCCCCCACTCTTCCCAGTACAAACAAA +
Preference number: 6 (lower is better)
Translates to: QNKSSVEENLLF*TLAPTLPSTNK
Trigger: TTTGTTTGTACTGGGAAGAGTGGGGGCAAGGGTGCAGAATAGCAAGTTTTCCTCAACGGAGGATTTGTTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392744.4
CDS GCA 72 bp ATGCCCGGGCAATACCTTTTATTAGGCTGGTGGAGGTaGCTTCTCCAATACCAAATGAGAAACACCTGTGTT +
Preference number: 6 (lower is better)
Translates to: MPGQYLLLGWWR*LLQYQMRNTCV
Trigger: AACACAGGTGTTTCTCATTTGGTATTGGAGAAGGCACCTCCACCAGCCTAATAAAAGGTATTGCCCGGGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS CAA 72 bp ACCTTATCCTCAAAAGTCTTGCCCTGGAGTGTATATTaGAGGCATACTTCTCCTGTTGTCTCTGCTGCTGGC +
Preference number: 6 (lower is better)
Translates to: TLSSKVLPWSVY*RHTSPVVSAAG
Trigger: GCCAGCAGCAGAGACAACAGGAGAAGTATGCCTCAAATATACACTCCAGGGCAAGACTTTTGAGGATAAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS CAA 90 bp TCAGGCTTGGGTTGTAGAGGAAATGTCACCTTATCCTCAAAAGTCTaGCCCTGGAGTGTATATTTGAGGCATACTTCTCCTGTTGTCTCT +
Preference number: 6 (lower is better)
Translates to: SGLGCRGNVTLSSKV*PWSVYLRHTSPVVS
Trigger: AGAGACAACAGGAGAAGTATGCCTCAAATATACACTCCAGGGCAAGACTTTTGAGGATAAGGTGACATTTCCTCTACAACCCAAGCCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS GCA 72 bp AGGCCACAGAAGTGCACCATGGTGATGCAAGATTTCTaGAGAAAAGACATATCACAAACAGAGGACATGTTG +
Preference number: 6 (lower is better)
Translates to: RPQKCTMVMQDF*RKDISQTEDML
Trigger: CAACATGTCCTCTGTTTGTGATATGTCTTTTCTGCAGAAATCTTGCATCACCATGGTGCACTTCTGTGGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392744.4
CDS CAA 90 bp TACCTAGGATCTTGGCTAGATCTTCATTCAGATCCCAGGAACCATTaGCATTTTGGTGGTAAATCAGCTGCACAAGGTGATTCTCTCCAA +
Preference number: 6 (lower is better)
Translates to: YLGSWLDLHSDPRNH*HFGGKSAAQGDSLQ
Trigger: TTGGAGAGAATCACCTTGTGCAGCTGATTTACCACCAAAATGCAAATGGTTCCTGGGATCTGAATGAAGATCTAGCCAAGATCCTAGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS GCA 72 bp CAAAGGAACTTTCTCCTCATTCTCGTAGTTCAAAGTTaGAGACACACCAGCCACAAACTCGTAAATGTTCAC +
Preference number: 6 (lower is better)
Translates to: QRNFLLILVVQS*RHTSHKLVNVH
Trigger: GTGAACATTTACGAGTTTGTGGCTGGTGTGTCTGCAACTTTGAACTACGAGAATGAGGAGAAAGTTCCTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000392748.5
ENST00000449321.5
ENST00000456829.7
ENST00000533623.1
CDS CCA 72 bp TTCTGGGATATTTGGATAGAAACTCACCATTGCAGATaGATCTCCCATCAAATGACCTGGCTTCATGTTAGG +
Preference number: 6 (lower is better)
Translates to: FWDIWIETHHCR*ISHQMTWLHVR
Trigger: CCTAACATGAAGCCAGGTCATTTGATGGGAGATCCATCTGCAATGGTGAGTTTCTATCCAAATATCCCAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000392748.5
ENST00000449321.5
ENST00000456829.7
CDS CAA 72 bp CCAAAGGAACTTTCTCCTCATTCTCGTAGTTCAAAGTaGCAGACACACCAGCCACAAACTCGTAAATGTTCA +
Preference number: 6 (lower is better)
Translates to: PKELSPHSRSSK*QTHQPQTRKCS
Trigger: TGAACATTTACGAGTTTGTGGCTGGTGTGTCTGCAACTTTGAACTACGAGAATGAGGAGAAAGTTCCTTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000392748.5
ENST00000449321.5
ENST00000456829.7
ENST00000533623.1
CDS CAA 72 bp GTTGATCTTCTGGGATATTTGGATAGAAACTCACCATaGCAGATGGATCTCCCATCAAATGACCTGGCTTCA +
Preference number: 6 (lower is better)
Translates to: VDLLGYLDRNSP*QMDLPSNDLAS
Trigger: TGAAGCCAGGTCATTTGATGGGAGATCCATCTGCAATGGTGAGTTTCTATCCAAATATCCCAGAAGATCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000392748.5
ENST00000449321.5
ENST00000456829.7
CDS CAA 72 bp GGTTGTAGAGGAAATGTCACCTTATCCTCAAAAGTCTaGCCCTGGAGTGTATATTTGAGGCATACTTCTCCT +
Preference number: 6 (lower is better)
Translates to: GCRGNVTLSSKV*PWSVYLRHTSP
Trigger: AGGAGAAGTATGCCTCAAATATACACTCCAGGGCAAGACTTTTGAGGATAAGGTGACATTTCCTCTACAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS TCA 72 bp GTATCTTCAAAAGGCAAAGATAGCAGGATCCACAGATaGCTTCAGGAAAGTAATAGCAGCTTTCACAACCGA +
Preference number: 6 (lower is better)
Translates to: VSSKGKDSRIHR*LQESNSSFHNR
Trigger: TCGGTTGTGAAAGCTGCTATTACTTTCCTGAAGTCATCTGTGGATCCTGCTATCTTTGCCTTTTGAAGATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS GCA 72 bp TTGATCTTCTGGGATATTTGGATAGAAACTCACCATTaGAGATGGATCTCCCATCAAATGACCTGGCTTCAT +
Preference number: 6 (lower is better)
Translates to: LIFWDIWIETHH*RWISHQMTWLH
Trigger: ATGAAGCCAGGTCATTTGATGGGAGATCCATCTGCAATGGTGAGTTTCTATCCAAATATCCCAGAAGATCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361352.9
ENST00000392744.4
ENST00000392748.5
ENST00000449321.5
ENST00000456829.7
CDS GCA 72 bp CTAGATTTCCAATGTCCACGTATTTACAGAAGAGACTaGGTCGGTCTCTTACATTTCTATAGAGAAGGGCTT +
Preference number: 6 (lower is better)
Translates to: LDFQCPRIYRRD*VGLLHFYREGL
Trigger: AAGCCCTTCTCTATAGAAATGTAAGAGACCGACGCAGTCTCTTCTGTAAATACGTGGACATTGGAAATCTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392744.4
CDS CCA 72 bp CAGCCATTATTTCTTCCAAACTCATACCTAGGATCTTaGCTAGATCTTCATTCAGATCCCAGGAACCATTTG +
Preference number: 6 (lower is better)
Translates to: QPLFLPNSYLGS*LDLHSDPRNHL
Trigger: CAAATGGTTCCTGGGATCTGAATGAAGATCTAGCCAAGATCCTAGGTATGAGTTTGGAAGAAATAATGGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392748.5
ENST00000456829.7
CDS CAA 90 bp ATGCAAGATTTCTGCAGAAAAGACATATCACAAACAGAGGACATGTaGGAAGTTATCTGTTCAAACACCAGTACTTTATGTGCCTTTCTC +
Preference number: 6 (lower is better)
Translates to: MQDFCRKDISQTEDM*EVICSNTSTLCAFL
Trigger: GAGAAAGGCACATAAAGTACTGGTGTTTGAACAGATAACTTCCAACATGTCCTCTGTTTGTGATATGTCTTTTCTGCAGAAATCTTGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392744.4
CDS CCA 72 bp ATCTGTTCAAACACCAGTACTTTATGTGCCTTTCTCTaGCATAAGAATACATTCAAAGGGTTAATGTTGGAG +
Preference number: 6 (lower is better)
Translates to: ICSNTSTLCAFL*HKNTFKGLMLE
Trigger: CTCCAACATTAACCCTTTGAATGTATTCTTATGCCAGAGAAAGGCACATAAAGTACTGGTGTTTGAACAGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392744.4
CDS CAA 72 bp TTCTGCAGAAAAGACATATCACAAACAGAGGACATGTaGGAAGTTATCTGTTCAAACACCAGTACTTTATGT +
Preference number: 6 (lower is better)
Translates to: FCRKDISQTEDM*EVICSNTSTLC
Trigger: ACATAAAGTACTGGTGTTTGAACAGATAACTTCCAACATGTCCTCTGTTTGTGATATGTCTTTTCTGCAGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392744.4