RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for VWA3B (Homo sapiens)

Ensembl gene IDs: ENSG00000168658

Ensembl transcript IDs: ENST00000409460.5, ENST00000416277.5, ENST00000422503.6, ENST00000432242.5, ENST00000433678.5, ENST00000448079.5, ENST00000448638.5, ENST00000463635.1, ENST00000465555.1, ENST00000465930.1, ENST00000466852.1, ENST00000473149.5, ENST00000477737.6, ENST00000483669.5, ENST00000484571.5, ENST00000485216.1, ENST00000489630.5, ENST00000489968.5, ENST00000490947.2, ENST00000495571.5, ENST00000614454.1

Found 1443 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGCTCGGGGTGTGTCCCCTGGCAGGACCCATGGGAGCTGATGCCGTaGGAGGAGCCGTCCGAGTCCGAGGGCGCCGCCTGCTGGAGTGGC +
Preference number: 1 (lower is better)
Translates to: GSGCVPWQDPWELMP*EEPSESEGAACWSG
Trigger: GCCACTCCAGCAGGCGGCGCCCTCGGACTCGGACGGCTCCTCCCACGGCATCAGCTCCCATGGGTCCTGCCAGGGGACACACCCCGAGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
3UTR TCA 90 bp CTGTCCTGGGCTCGGGGTGTGTCCCCTGGCAGGACCCATGGGAGCTaGTGCCGTGGGAGGAGCCGTCCGAGTCCGAGGGCGCCGCCTGCT +
Preference number: 1 (lower is better)
Translates to: LSWARGVSPGRTHGS*CRGRSRPSPRAPPA
Trigger: AGCAGGCGGCGCCCTCGGACTCGGACGGCTCCTCCCACGGCATCAGCTCCCATGGGTCCTGCCAGGGGACACACCCCGAGCCCAGGACAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
3UTR CCA 90 bp AGGTGGGCTGTCCTGGGCTCGGGGTGTGTCCCCTGGCAGGACCCATaGGAGCTGATGCCGTGGGAGGAGCCGTCCGAGTCCGAGGGCGCC +
Preference number: 1 (lower is better)
Translates to: RWAVLGSGCVPWQDP*ELMPWEEPSESEGA
Trigger: GGCGCCCTCGGACTCGGACGGCTCCTCCCACGGCATCAGCTCCCATGGGTCCTGCCAGGGGACACACCCCGAGCCCAGGACAGCCCACCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
3UTR GCA 90 bp GAGCTGATGCCGTGGGAGGAGCCGTCCGAGTCCGAGGGCGCCGCCTaGTGGAGTGGCTGCTTGGCGGGCCTCTTTTTCCTCCTGGGCTTC +
Preference number: 1 (lower is better)
Translates to: ELMPWEEPSESEGAA*WSGCLAGLFFLLGF
Trigger: GAAGCCCAGGAGGAAAAAGAGGCCCGCCAAGCAGCCACTCCAGCAGGCGGCGCCCTCGGACTCGGACGGCTCCTCCCACGGCATCAGCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
3UTR CCA 90 bp GCCGTGGGAGGAGCCGTCCGAGTCCGAGGGCGCCGCCTGCTGGAGTaGCTGCTTGGCGGGCCTCTTTTTCCTCCTGGGCTTCTCTCGTCT +
Preference number: 1 (lower is better)
Translates to: AVGGAVRVRGRRLLE*LLGGPLFPPGLLSS
Trigger: AGACGAGAGAAGCCCAGGAGGAAAAAGAGGCCCGCCAAGCAGCCACTCCAGCAGGCGGCGCCCTCGGACTCGGACGGCTCCTCCCACGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
3UTR GCA 90 bp TGGGAGGAGCCGTCCGAGTCCGAGGGCGCCGCCTGCTGGAGTGGCTaGTTGGCGGGCCTCTTTTTCCTCCTGGGCTTCTCTCGTCTTGGC +
Preference number: 1 (lower is better)
Translates to: WEEPSESEGAACWSG*LAGLFFLLGFSRLG
Trigger: GCCAAGACGAGAGAAGCCCAGGAGGAAAAAGAGGCCCGCCAAGCAGCCACTCCAGCAGGCGGCGCCCTCGGACTCGGACGGCTCCTCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
3UTR CCA 90 bp CTGATGCCGTGGGAGGAGCCGTCCGAGTCCGAGGGCGCCGCCTGCTaGAGTGGCTGCTTGGCGGGCCTCTTTTTCCTCCTGGGCTTCTCT +
Preference number: 1 (lower is better)
Translates to: LMPWEEPSESEGAAC*SGCLAGLFFLLGFS
Trigger: AGAGAAGCCCAGGAGGAAAAAGAGGCCCGCCAAGCAGCCACTCCAGCAGGCGGCGCCCTCGGACTCGGACGGCTCCTCCCACGGCATCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
3UTR CCA 90 bp GTACAGGGCAGGGCTGCTCGAGGTGGAGGTGTGGCAATGATGGCGTaGCTGCTGAGTCCTAGACGCCCGGCCGCGGGGAAGTGGAGGTGG +
Preference number: 1 (lower is better)
Translates to: VQGRAARGGGVAMMA*LLSPRRPAAGKWRW
Trigger: CCACCTCCACTTCCCCGCGGCCGGGCGTCTAGGACTCAGCAGCCACGCCATCATTGCCACACCTCCACCTCGAGCAGCCCTGCCCTGTAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
3UTR CCA 90 bp AGGAGCCGTCCGAGTCCGAGGGCGCCGCCTGCTGGAGTGGCTGCTTaGCGGGCCTCTTTTTCCTCCTGGGCTTCTCTCGTCTTGGCTCTC +
Preference number: 1 (lower is better)
Translates to: RSRPSPRAPPAGVAA*RASFSSWASLVLAL
Trigger: GAGAGCCAAGACGAGAGAAGCCCAGGAGGAAAAAGAGGCCCGCCAAGCAGCCACTCCAGCAGGCGGCGCCCTCGGACTCGGACGGCTCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
3UTR CCA 90 bp TCCACAGTGGCCACGTCGGGCTTGGGAGGCTCGGCCACCAGCCTCTaGATCTGGGCCAGCGTGCTGCAGGCTTCCTCCATCTCTTGCCAA +
Preference number: 1 (lower is better)
Translates to: STVATSGLGGSATSL*IWASVLQASSISCQ
Trigger: TTGGCAAGAGATGGAGGAAGCCTGCAGCACGCTGGCCCAGATCCAGAGGCTGGTGGCCGAGCCTCCCAAGCCCGACGTGGCCACTGTGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422503.6
ENST00000432242.5
3UTR CCA 90 bp GCGCCGCCTGCTGGAGTGGCTGCTTGGCGGGCCTCTTTTTCCTCCTaGGCTTCTCTCGTCTTGGCTCTCTGGAATCCTGCGTGTCCGCTT +
Preference number: 1 (lower is better)
Translates to: APPAGVAAWRASFSS*ASLVLALWNPACPL
Trigger: AAGCGGACACGCAGGATTCCAGAGAGCCAAGACGAGAGAAGCCCAGGAGGAAAAAGAGGCCCGCCAAGCAGCCACTCCAGCAGGCGGCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
3UTR CCA 90 bp AGTGTCTCAGGGACGCTCCTCAGCCCTTTGCTGCTGTGGGTGGCTTaGAGAGTACAGGGCAGGGCTGCTCGAGGTGGAGGTGTGGCAATG +
Preference number: 1 (lower is better)
Translates to: SVSGTLLSPLLLWVA*RVQGRAARGGGVAM
Trigger: CATTGCCACACCTCCACCTCGAGCAGCCCTGCCCTGTACTCTCCAAGCCACCCACAGCAGCAAAGGGCTGAGGAGCGTCCCTGAGACACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000489630.5
ENST00000495571.5
3UTR CCA 90 bp CTTAAAGTGTCTCAGGGACGCTCCTCAGCCCTTTGCTGCTGTGGGTaGCTTGGAGAGTACAGGGCAGGGCTGCTCGAGGTGGAGGTGTGG +
Preference number: 1 (lower is better)
Translates to: LKVSQGRSSALCCCG*LGEYRAGLLEVEVW
Trigger: CCACACCTCCACCTCGAGCAGCCCTGCCCTGTACTCTCCAAGCCACCCACAGCAGCAAAGGGCTGAGGAGCGTCCCTGAGACACTTTAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000489630.5
ENST00000495571.5
3UTR GCA 90 bp AGCCTCTGGATCTGGGCCAGCGTGCTGCAGGCTTCCTCCATCTCTTaGCAAACGAGAAACACGTCCTCTCTGACTCCAGCTCCTGGAGGG +
Preference number: 1 (lower is better)
Translates to: SLWIWASVLQASSIS*QTRNTSSLTPAPGG
Trigger: CCCTCCAGGAGCTGGAGTCAGAGAGGACGTGTTTCTCGTTTGGCAAGAGATGGAGGAAGCCTGCAGCACGCTGGCCCAGATCCAGAGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422503.6
ENST00000432242.5
3UTR TCA 90 bp AGGGCGGCCTTACCTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTaGGGTCTGAACAGCCTGGAAGGACGCTGGTCTCTTAAACATAGC +
Preference number: 1 (lower is better)
Translates to: RAALPPRRGQFQCQR*GLNSLEGRWSLKHS
Trigger: GCTATGTTTAAGAGACCAGCGTCCTTCCAGGCTGTTCAGACCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGGTAAGGCCGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
3UTR TCA 90 bp GTCCAGGACGGGAACATAGGTGGAGCTGTGCGGGACTGCTGCCACTaGCAAGGCATCCATGAGGGTGAGTTTCTTGGCGACCAAGCCATA +
Preference number: 1 (lower is better)
Translates to: VQDGNIGGAVRDCCH*QGIHEGEFLGDQAI
Trigger: TATGGCTTGGTCGCCAAGAAACTCACCCTCATGGATGCCTTGTCAGTGGCAGCAGTCCCGCACAGCTCCACCTATGTTCCCGTCCTGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
ENST00000489630.5
ENST00000495571.5
3UTR TCA 90 bp CCTTACCTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCTaGACAGCCTGGAAGGACGCTGGTCTCTTAAACATAGCTGCCACC +
Preference number: 1 (lower is better)
Translates to: PYLRGGASFSVNAEV*TAWKDAGLLNIAAT
Trigger: GGTGGCAGCTATGTTTAAGAGACCAGCGTCCTTCCAGGCTGTTCAGACCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGGTAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
3UTR CCA 90 bp TGGCTGCTTGGCGGGCCTCTTTTTCCTCCTGGGCTTCTCTCGTCTTaGCTCTCTGGAATCCTGCGTGTCCGCTTCTTTCAGTGGCCAGAA +
Preference number: 1 (lower is better)
Translates to: WLLGGPLFPPGLLSS*LSGILRVRFFQWPE
Trigger: TTCTGGCCACTGAAAGAAGCGGACACGCAGGATTCCAGAGAGCCAAGACGAGAGAAGCCCAGGAGGAAAAAGAGGCCCGCCAAGCAGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
3UTR TCA 90 bp AACAGACTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCTaGACAGCCTGGAAGGACGCTGGTCTCTTAAACATAGCTGCCACC +
Preference number: 1 (lower is better)
Translates to: NRLRGGASFSVNAEV*TAWKDAGLLNIAAT
Trigger: GGTGGCAGCTATGTTTAAGAGACCAGCGTCCTTCCAGGCTGTTCAGACCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGTCTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495571.5
ENST00000614454.1
3UTR CCA 90 bp TGGCGGGCCTCTTTTTCCTCCTGGGCTTCTCTCGTCTTGGCTCTCTaGAATCCTGCGTGTCCGCTTCTTTCAGTGGCCAGAAGAGGAAAG +
Preference number: 1 (lower is better)
Translates to: WRASFSSWASLVLAL*NPACPLLSVARRGK
Trigger: CTTTCCTCTTCTGGCCACTGAAAGAAGCGGACACGCAGGATTCCAGAGAGCCAAGACGAGAGAAGCCCAGGAGGAAAAAGAGGCCCGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
3UTR GCA 90 bp GGAGGTGGACACGACCTTGGTGTCTCCGTAACTGAAGCCCACCAGTaGTTGGGTGCGGCTCACACACTTCTTCACAACCCCTGGAAAATA +
Preference number: 1 (lower is better)
Translates to: GGGHDLGVSVTEAHQ*LGAAHTLLHNPWKI
Trigger: TATTTTCCAGGGGTTGTGAAGAAGTGTGTGAGCCGCACCCAAGCACTGGTGGGCTTCAGTTACGGAGACACCAAGGTCGTGTCCACCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
3UTR CCA 90 bp CTCTCGTCTTGGCTCTCTGGAATCCTGCGTGTCCGCTTCTTTCAGTaGCCAGAAGAGGAAAGCAGAGTTCCTCGCCTCCACATCCTCTAC +
Preference number: 1 (lower is better)
Translates to: LSSWLSGILRVRFFQ*PEEESRVPRLHILY
Trigger: GTAGAGGATGTGGAGGCGAGGAACTCTGCTTTCCTCTTCTGGCCACTGAAAGAAGCGGACACGCAGGATTCCAGAGAGCCAAGACGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
3UTR TCA 90 bp TACCTACAACAGACTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTaGGGTCTGAACAGCCTGGAAGGACGCTGGTCTCTTAAACATAGC +
Preference number: 1 (lower is better)
Translates to: YLQQTPRRGQFQCQR*GLNSLEGRWSLKHS
Trigger: GCTATGTTTAAGAGACCAGCGTCCTTCCAGGCTGTTCAGACCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGTCTGTTGTAGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495571.5
ENST00000614454.1
3UTR TCA 90 bp CTGTATGGAATGAAGGAAACAGCTCCAGAGCGAGAGACTTGGGCTTaGAGCTCATCCAGCACTGCCCATCTGAATGGCCTAGGGCATGTC +
Preference number: 1 (lower is better)
Translates to: LYGMKETAPERETWA*SSSSTAHLNGLGHV
Trigger: GACATGCCCTAGGCCATTCAGATGGGCAGTGCTGGATGAGCTTCAAGCCCAAGTCTCTCGCTCTGGAGCTGTTTCCTTCATTCCATACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000422503.6
ENST00000432242.5
ENST00000433678.5
ENST00000495571.5
3UTR GCA 90 bp CCAGCAAGATGCTCATTTCTTTGTCACTTAGAGCAGTCCTCCGGCTaGTGGCATTGGAGAGGCCATCCTTCCTTTCACTGCAAGCTGAGC +
Preference number: 1 (lower is better)
Translates to: PARCSFLCHLEQSSG*WHWRGHPSFHCKLS
Trigger: GCTCAGCTTGCAGTGAAAGGAAGGATGGCCTCTCCAATGCCAGCAGCCGGAGGACTGCTCTAAGTGACAAAGAAATGAGCATCTTGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
ENST00000489630.5
ENST00000495571.5
3UTR GCA 90 bp GCTCCCATCCTTCCAGGGAGCATGGACAAACCTGCTGCAATATTTTaGATGGACTGTCTTCTTGTTCGTCTCCGCACTGGTCTGCACGGA +
Preference number: 1 (lower is better)
Translates to: APILPGSMDKPAAIF*MDCLLVRLRTGLHG
Trigger: TCCGTGCAGACCAGTGCGGAGACGAACAAGAAGACAGTCCATGCAAAATATTGCAGCAGGTTTGTCCATGCTCCCTGGAAGGATGGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422503.6
3UTR GCA 90 bp CGTGGACCAAGCTCCCATCCTTCCAGGGAGCATGGACAAACCTGCTaGAATATTTTGCATGGACTGTCTTCTTGTTCGTCTCCGCACTGG +
Preference number: 1 (lower is better)
Translates to: RGPSSHPSREHGQTC*NILHGLSSCSSPHW
Trigger: CCAGTGCGGAGACGAACAAGAAGACAGTCCATGCAAAATATTGCAGCAGGTTTGTCCATGCTCCCTGGAAGGATGGGAGCTTGGTCCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422503.6
3UTR GCA 90 bp CTCTTTTTCCTCCTGGGCTTCTCTCGTCTTGGCTCTCTGGAATCCTaGGTGTCCGCTTCTTTCAGTGGCCAGAAGAGGAAAGCAGAGTTC +
Preference number: 1 (lower is better)
Translates to: LFFLLGFSRLGSLES*VSASFSGQKRKAEF
Trigger: GAACTCTGCTTTCCTCTTCTGGCCACTGAAAGAAGCGGACACGCAGGATTCCAGAGAGCCAAGACGAGAGAAGCCCAGGAGGAAAAAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
3UTR CCA 90 bp GCAAGATGCTCATTTCTTTGTCACTTAGAGCAGTCCTCCGGCTGCTaGCATTGGAGAGGCCATCCTTCCTTTCACTGCAAGCTGAGCTCC +
Preference number: 1 (lower is better)
Translates to: ARCSFLCHLEQSSGC*HWRGHPSFHCKLSS
Trigger: GGAGCTCAGCTTGCAGTGAAAGGAAGGATGGCCTCTCCAATGCCAGCAGCCGGAGGACTGCTCTAAGTGACAAAGAAATGAGCATCTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
ENST00000489630.5
ENST00000495571.5
3UTR CCA 90 bp TCTTGTTCGTCTCCGCACTGGTCTGCACGGACTCATTCTCCGGTTTaGCTTTTATATCCACAACCCCATCAGCGTGGCGGAAAGAGCAGT +
Preference number: 1 (lower is better)
Translates to: SCSSPHWSARTHSPV*LLYPQPHQRGGKSS
Trigger: ACTGCTCTTTCCGCCACGCTGATGGGGTTGTGGATATAAAAGCCAAACCGGAGAATGAGTCCGTGCAGACCAGTGCGGAGACGAACAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422503.6
3UTR CCA 90 bp CCATCCTTCCAGGGAGCATGGACAAACCTGCTGCAATATTTTGCATaGACTGTCTTCTTGTTCGTCTCCGCACTGGTCTGCACGGACTCA +
Preference number: 1 (lower is better)
Translates to: PSFQGAWTNLLQYFA*TVFLFVSALVCTDS
Trigger: TGAGTCCGTGCAGACCAGTGCGGAGACGAACAAGAAGACAGTCCATGCAAAATATTGCAGCAGGTTTGTCCATGCTCCCTGGAAGGATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422503.6
3UTR CCA 90 bp AGACTGGACACGGGATCTCCAAGGCCCTCTGGAGGAGAAGCTCCTTaGATTCTTCAGGAACATCCCCCACCACAAAGTAGTAAATGGATT +
Preference number: 1 (lower is better)
Translates to: RLDTGSPRPSGGEAP*ILQEHPPPQSSKWI
Trigger: AATCCATTTACTACTTTGTGGTGGGGGATGTTCCTGAAGAATCCAAGGAGCTTCTCCTCCAGAGGGCCTTGGAGATCCCGTGTCCAGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422503.6
ENST00000432242.5
3UTR CCA 90 bp TGGCGGAAAGAGCAGTCGGCAAGCACATCATACAAGGATAGCTTCTaGGCCTTCAAGCCATATTTCTGCAGCCATGTCTTAGAGTCCCAG +
Preference number: 1 (lower is better)
Translates to: WRKEQSASTSYKDSF*AFKPYFCSHVLESQ
Trigger: CTGGGACTCTAAGACATGGCTGCAGAAATATGGCTTGAAGGCCCAGAAGCTATCCTTGTATGATGTGCTTGCCGACTGCTCTTTCCGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422503.6
ENST00000432242.5
3UTR CCA 90 bp GCAATTTCTGTTGCTCTCCCGGGGCCTTGTTTGCATAATTCTTCTTaGCAGCCTCCTGGAGTTCCATGGCCTGCTGGATGTACATTTTCC +
Preference number: 1 (lower is better)
Translates to: AISVALPGPCLHNSS*QPPGVPWPAGCTFS
Trigger: GGAAAATGTACATCCAGCAGGCCATGGAACTCCAGGAGGCTGCCAAGAAGAATTATGCAAACAAGGCCCCGGGAGAGCAACAGAAATTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
3UTR TCA 90 bp CACATGACAGTCTCTCCCACTCATGCTGTCTTCAGCTGTATGGAATaGAGGAAACAGCTCCAGAGCGAGAGACTTGGGCTTGAAGCTCAT +
Preference number: 1 (lower is better)
Translates to: HMTVSPTHAVFSCME*RKQLQSERLGLEAH
Trigger: ATGAGCTTCAAGCCCAAGTCTCTCGCTCTGGAGCTGTTTCCTTCATTCCATACAGCTGAAGACAGCATGAGTGGGAGAGACTGTCATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000433678.5
ENST00000495571.5
3UTR CCA 90 bp GACTCATTCTCCGGTTTGGCTTTTATATCCACAACCCCATCAGCGTaGCGGAAAGAGCAGTCGGCAAGCACATCATACAAGGATAGCTTC +
Preference number: 1 (lower is better)
Translates to: DSFSGLAFISTTPSA*RKEQSASTSYKDSF
Trigger: GAAGCTATCCTTGTATGATGTGCTTGCCGACTGCTCTTTCCGCCACGCTGATGGGGTTGTGGATATAAAAGCCAAACCGGAGAATGAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000422503.6
ENST00000432242.5
ENST00000448638.5
3UTR CCA 90 bp GGGCCTTGTTTGCATAATTCTTCTTGGCAGCCTCCTGGAGTTCCATaGCCTGCTGGATGTACATTTTCCCAGCTAGGATTTCACTTTCCA +
Preference number: 1 (lower is better)
Translates to: GPCLHNSSWQPPGVP*PAGCTFSQLGFHFP
Trigger: TGGAAAGTGAAATCCTAGCTGGGAAAATGTACATCCAGCAGGCCATGGAACTCCAGGAGGCTGCCAAGAAGAATTATGCAAACAAGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
3UTR GCA 90 bp AGCACATCATACAAGGATAGCTTCTGGGCCTTCAAGCCATATTTCTaGAGCCATGTCTTAGAGTCCCAGGTGTCTTCTGGATTCGATGCA +
Preference number: 1 (lower is better)
Translates to: STSYKDSFWAFKPYF*SHVLESQVSSGFDA
Trigger: TGCATCGAATCCAGAAGACACCTGGGACTCTAAGACATGGCTGCAGAAATATGGCTTGAAGGCCCAGAAGCTATCCTTGTATGATGTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422503.6
ENST00000432242.5
3UTR TCA 90 bp GATGCTTGCTGTCTCCATCCTTTTCTGCATTGTACCACCAGTCCATaGTCAAGGACTCAGAATAAAGGTCTTGCATCTTCTCCAGATCAC +
Preference number: 1 (lower is better)
Translates to: DACCLHPFLHCTTSP*SRTQNKGLASSPDH
Trigger: GTGATCTGGAGAAGATGCAAGACCTTTATTCTGAGTCCTTGATCATGGACTGGTGGTACAATGCAGAAAAGGATGGAGACAGCAAGCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
ENST00000495571.5
3UTR TCA 90 bp CTGTGTAGAATTTTTCTGTGGCCACATGCTTATTGGGAAGTGCTATaGCAATGGCAGGGACATAGAAGTCAAATCCTTTGGGTATCACAA +
Preference number: 1 (lower is better)
Translates to: LCRIFLWPHAYWEVL*QWQGHRSQILWVSQ
Trigger: TTGTGATACCCAAAGGATTTGACTTCTATGTCCCTGCCATTGTCATAGCACTTCCCAATAAGCATGTGGCCACAGAAAAATTCTACACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
3UTR TCA 90 bp ACATCCTCTACTTCTGGATCCTCAGGAATTGGGGGTGACTTTATATaGGAGCAAGAGAGCGCATACTTGTTTTGGCTGATCTTAATAAGT +
Preference number: 1 (lower is better)
Translates to: TSSTSGSSGIGGDFI*EQESAYLFWLILIS
Trigger: ACTTATTAAGATCAGCCAAAACAAGTATGCGCTCTCTTGCTCTCATATAAAGTCACCCCCAATTCCTGAGGATCCAGAAGTAGAGGATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
3UTR CCA 90 bp TCAGTTTCCTTGAATTCCAAGTCATCACATTGTCACCATCCTTTGTaGAGAATGCAGGAAATTCTACACACTCTGTTCTCTCGGCAAATG +
Preference number: 1 (lower is better)
Translates to: SVSLNSKSSHCHHPL*RMQEILHTLFSRQM
Trigger: CATTTGCCGAGAGAACAGAGTGTGTAGAATTTCCTGCATTCTCCACAAAGGATGGTGACAATGTGATGACTTGGAATTCAAGGAAACTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422503.6
ENST00000432242.5
3UTR CCA 90 bp CAGCTAGGATTTCACTTTCCAGCATCGACAGCTCTTTCAGTGAAATaGGCCAATTCAACCGTTCTAAAGCCTGGTTTAAAACTGTTTTGT +
Preference number: 1 (lower is better)
Translates to: QLGFHFPASTALSVK*ANSTVLKPGLKLFC
Trigger: ACAAAACAGTTTTAAACCAGGCTTTAGAACGGTTGAATTGGCCCATTTCACTGAAAGAGCTGTCGATGCTGGAAAGTGAAATCCTAGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
3UTR TCA 90 bp CCTTCACCAAGTCCAGTTTGCTCTTCATTGAGTGAGACGTGTCAATaGGAATGTAGATGCAATCATTATGCAATCTTCCAAAGAGGCTTT +
Preference number: 1 (lower is better)
Translates to: PSPSPVCSSLSETCQ*ECRCNHYAIFQRGF
Trigger: AAAGCCTCTTTGGAAGATTGCATAATGATTGCATCTACATTCTCATTGACACGTCTCACTCAATGAAGAGCAAACTGGACTTGGTGAAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000422503.6
ENST00000432242.5
ENST00000448638.5
3UTR TCA 90 bp GTAGGGGATGTTCAGTCTTGCAGATCTCAGACAAGTTACCGAGTCTaGATTTCAGTCCTAATATTGGGTGACAAATTCTCTAATTTAGAT +
Preference number: 1 (lower is better)
Translates to: VGDVQSCRSQTSYRV*ISVLILGDKFSNLD
Trigger: ATCTAAATTAGAGAATTTGTCACCCAATATTAGGACTGAAATTCAGACTCGGTAACTTGTCTGAGATCTGCAAGACTGAACATCCCCTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
3UTR GCA 90 bp GAACTCTCCTCCAGTCAAAGCAGCAACCTCTTTCAAAAACCTGTTTaGAATCTCATCATTGTAATTGAAGGAGATGGTATAAATAGGAAT +
Preference number: 1 (lower is better)
Translates to: ELSSSQSSNLFQKPV*NLIIVIEGDGINRN
Trigger: ATTCCTATTTATACCATCTCCTTCAATTACAATGATGAGATTGCAAACAGGTTTTTGAAAGAGGTTGCTGCTTTGACTGGAGGAGAGTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000433678.5
ENST00000448638.5
ENST00000495571.5
3UTR TCA 90 bp TTCAACATATTCAGAGATGAAGTTTGTGTTGAATCGACATCAGATTaGGGCTTTGCACACTTTTCTGGGGTTGAAATCATAGAACAGATT +
Preference number: 1 (lower is better)
Translates to: FNIFRDEVCVESTSD*GFAHFSGVEIIEQI
Trigger: AATCTGTTCTATGATTTCAACCCCAGAAAAGTGTGCAAAGCCTCAATCTGATGTCGATTCAACACAAACTTCATCTCTGAATATGTTGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
ENST00000495571.5
3UTR CAA 90 bp GAGGAGCCGTCCGAGTCCGAGGGCGCCGCCTGCTGGAGTGGCTGCTaGGCGGGCCTCTTTTTCCTCCTGGGCTTCTCTCGTCTTGGCTCT +
Preference number: 2 (lower is better)
Translates to: EEPSESEGAACWSGC*AGLFFLLGFSRLGS
Trigger: AGAGCCAAGACGAGAGAAGCCCAGGAGGAAAAAGAGGCCCGCCAAGCAGCCACTCCAGCAGGCGGCGCCCTCGGACTCGGACGGCTCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
3UTR-3UTR TCA 90 bp GACCCATGGGAGCTGATGCCGTGGGAGGAGCCGTCCGAGTCCGAGGGCGCCGCCCCTTTCACTGCAAGCTaGGCTCCTGAGGGAGGACAT +
Preference number: 2 (lower is better)
Translates to: DPWELMPWEEPSESEGAAPFTAS*APEGGH
Trigger: ATGTCCTCCCTCAGGAGCTCAGCTTGCAGTGAAAGG...GGCGGCGCCCTCGGACTCGGACGGCTCCTCCCACGGCATCAGCTCCCATGGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
3UTR-3UTR CCA 90 bp GACAGGGCAGGCATAGGCGGCGCGGAGGGCGGCCTTACCTCCGCGGAGGGGCCAATCTCCAAGGCCCTCTaGAGGAGAAGCTCCTTGGAT +
Preference number: 2 (lower is better)
Translates to: DRAGIGGAEGGLTSAEGPISKAL*RRSSLD
Trigger: ATCCAAGGAGCTTCTCCTCCAGAGGGCCTTGGAGAT...TGGCCCCTCCGCGGAGGTAAGGCCGCCCTCCGCGCCGCCTATGCCTGCCCTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432242.5
3UTR-3UTR TCA 90 bp CTGCTGAGTCCTAGACGCCCGGCCGCGGGGAAGTGGAGGTGGGCTGTCCTGGGCCCTTTCACTGCAAGCTaGGCTCCTGAGGGAGGACAT +
Preference number: 2 (lower is better)
Translates to: LLSPRRPAAGKWRWAVLGPFTAS*APEGGH
Trigger: ATGTCCTCCCTCAGGAGCTCAGCTTGCAGTGAAAGG...GCCCAGGACAGCCCACCTCCACTTCCCCGCGGCCGGGCGTCTAGGACTCAGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
3UTR-3UTR CCA 90 bp GAGGGCGGCCTTACCTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCTTCGGGGTGTGTCCCCTaGCAGGACCCATGGGAGCTG +
Preference number: 2 (lower is better)
Translates to: EGGLTSAEGPVSVSTLRSSGCVP*QDPWEL
Trigger: CAGCTCCCATGGGTCCTGCCAGGGGACACACCCCGA...AGACCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGGTAAGGCCGCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000489630.5
3UTR-3UTR CCA 90 bp GAGGGCGGCCTTACCTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCTCAGGGCTGCTCGAGGTaGAGGTGTGGCAATGATGGC +
Preference number: 2 (lower is better)
Translates to: EGGLTSAEGPVSVSTLRSQGCSR*RCGNDG
Trigger: GCCATCATTGCCACACCTCCACCTCGAGCAGCCCTG...AGACCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGGTAAGGCCGCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000489630.5
3UTR CAA 90 bp AAGTGTCTCAGGGACGCTCCTCAGCCCTTTGCTGCTGTGGGTGGCTaGGAGAGTACAGGGCAGGGCTGCTCGAGGTGGAGGTGTGGCAAT +
Preference number: 2 (lower is better)
Translates to: KCLRDAPQPFAAVGG*ESTGQGCSRWRCGN
Trigger: ATTGCCACACCTCCACCTCGAGCAGCCCTGCCCTGTACTCTCCAAGCCACCCACAGCAGCAAAGGGCTGAGGAGCGTCCCTGAGACACTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000489630.5
ENST00000495571.5
3UTR-3UTR TCA 90 bp GCGGAGGGCGGCCTTACCTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGCTGAACCTTTTGATCTaGAAGGCCCCATGGTCCCTT +
Preference number: 2 (lower is better)
Translates to: AEGGLTSAEGPVSVSTLRLNLLI*KAPWSL
Trigger: AAGGGACCATGGGGCCTTTCAGATCAAAAGGTTCAG...CCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGGTAAGGCCGCCCTCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000489630.5
3UTR-3UTR TCA 90 bp CTGCTGAGTCCTAGACGCCCGGCCGCGGGGAAGTGGAGGTGGGCTGTCCTGGGCCACTTCACAGGCTCTTaGGAAACCCGTATGATATTG +
Preference number: 2 (lower is better)
Translates to: LLSPRRPAAGKWRWAVLGHFTGS*ETRMIL
Trigger: CAATATCATACGGGTTTCTCAAGAGCCTGTGAAGTG...GCCCAGGACAGCCCACCTCCACTTCCCCGCGGCCGGGCGTCTAGGACTCAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432242.5
3UTR-3UTR CCA 90 bp CCGTGGGAGGAGCCGTCCGAGTCCGAGGGCGCCGCCTGCTGGAGTGGCTGCTTGCACTCAGGGTGTTTGTaGAGCTTCCAATCTTTATGT +
Preference number: 2 (lower is better)
Translates to: PWEEPSESEGAACWSGCLHSGCL*SFQSLC
Trigger: ACATAAAGATTGGAAGCTCCACAAACACCCTGAGTG...CAAGCAGCCACTCCAGCAGGCGGCGCCCTCGGACTCGGACGGCTCCTCCCACGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432242.5
3UTR-3UTR CCA 90 bp GCGGAGGGCGGCCTTACCTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGAGCCTGGAAGGACGCTaGTCTCTTAAACATAGCTGC +
Preference number: 2 (lower is better)
Translates to: AEGGLTSAEGPVSVSTLRSLEGR*SLKHSC
Trigger: GCAGCTATGTTTAAGAGACCAGCGTCCTTCCAGGCT...CCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGGTAAGGCCGCCCTCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
3UTR CAA 90 bp CAGCCTCTGGATCTGGGCCAGCGTGCTGCAGGCTTCCTCCATCTCTaGCCAAACGAGAAACACGTCCTCTCTGACTCCAGCTCCTGGAGG +
Preference number: 2 (lower is better)
Translates to: QPLDLGQRAAGFLHL*PNEKHVLSDSSSWR
Trigger: CCTCCAGGAGCTGGAGTCAGAGAGGACGTGTTTCTCGTTTGGCAAGAGATGGAGGAAGCCTGCAGCACGCTGGCCCAGATCCAGAGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422503.6
ENST00000432242.5
3UTR-3UTR GCA 90 bp ACAGACAGGGCAGGCATAGGCGGCGCGGAGGGCGGCCTTACCTCCGCGGAGGGGATCCTTTGTGGAGAATaGAGGAAATTCTACACACTC +
Preference number: 2 (lower is better)
Translates to: TDRAGIGGAEGGLTSAEGILCGE*RKFYTL
Trigger: GAGTGTGTAGAATTTCCTGCATTCTCCACAAAGGAT...CCCCTCCGCGGAGGTAAGGCCGCCCTCCGCGCCGCCTATGCCTGCCCTGTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432242.5
3UTR-3UTR CCA 90 bp TCAACAGAGGTTGTTTCTGACTCGCAGTCCACAGTGGCCACGTCGGGCTTGGGAACTCGCAGTCCACAGTaGCCACGTCGGGCTTGGGAG +
Preference number: 2 (lower is better)
Translates to: STEVVSDSQSTVATSGLGTRSPQ*PRRAWE
Trigger: CTCCCAAGCCCGACGTGGCCACTGTGGACTGCGAGT...TCCCAAGCCCGACGTGGCCACTGTGGACTGCGAGTCAGAAACAACCTCTGTTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422503.6
ENST00000432242.5
3UTR CAA 90 bp GTGGCTGCTTGGCGGGCCTCTTTTTCCTCCTGGGCTTCTCTCGTCTaGGCTCTCTGGAATCCTGCGTGTCCGCTTCTTTCAGTGGCCAGA +
Preference number: 2 (lower is better)
Translates to: VAAWRASFSSWASLV*ALWNPACPLLSVAR
Trigger: TCTGGCCACTGAAAGAAGCGGACACGCAGGATTCCAGAGAGCCAAGACGAGAGAAGCCCAGGAGGAAAAAGAGGCCCGCCAAGCAGCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
3UTR-3UTR TCA 90 bp ATAGTCTTGTCTCTCCCGGCTTCCAGCAGAGCATCCAGGCGGCCAGCCTCGCTCCTTCTCCTCTGGCGTTaGAGGACACTGTGTAGACTG +
Preference number: 2 (lower is better)
Translates to: IVLSLPASSRASRRPASLLLLWR*RTLCRL
Trigger: CAGTCTACACAGTGTCCTTCAACGCCAGAGGAGAAG...GAGCGAGGCTGGCCGCCTGGATGCTCTGCTGGAAGCCGGGAGAGACAAGACTAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422503.6
ENST00000432242.5
3UTR-3UTR GCA 90 bp CGGGGCCTTGTTTGCATAATTCTTCTTGGCAGCCTCCTGGAGTTCCATGGCCTGGAGCAGTCCTCCGGCTaGTGGCATTGGAGAGGCCAT +
Preference number: 2 (lower is better)
Translates to: RGLVCIILLGSLLEFHGLEQSSG*WHWRGH
Trigger: ATGGCCTCTCCAATGCCAGCAGCCGGAGGACTGCTC...CAGGCCATGGAACTCCAGGAGGCTGCCAAGAAGAATTATGCAAACAAGGCCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
3UTR-3UTR CCA 90 bp TGGCCAGAAGAGGAAAGCAGAGTTCCTCGCCTCCACATCCTCTACTTCTGGATCACTCGCAGTCCACAGTaGCCACGTCGGGCTTGGGAG +
Preference number: 2 (lower is better)
Translates to: WPEEESRVPRLHILYFWITRSPQ*PRRAWE
Trigger: CTCCCAAGCCCGACGTGGCCACTGTGGACTGCGAGT...GATCCAGAAGTAGAGGATGTGGAGGCGAGGAACTCTGCTTTCCTCTTCTGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432242.5
3UTR-3UTR GCA 90 bp CTTCTTGTTCGTCTCCGCACTGGTCTGCACGGACTCATTCTCCGGTTTGGCTTTGGATCTGGGCCAGCGTaGTGCAGGCTTCCTCCATCT +
Preference number: 2 (lower is better)
Translates to: LLVRLRTGLHGLILRFGFGSGPA*CRLPPS
Trigger: AGATGGAGGAAGCCTGCAGCACGCTGGCCCAGATCC...AAAGCCAAACCGGAGAATGAGTCCGTGCAGACCAGTGCGGAGACGAACAAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422503.6
3UTR-3UTR CCA 90 bp GACCTTAGACACGACATGCTTGTCCAGGACGGGAACATAGGTGGAGCTGTGCGGTCCGGCTGCTGGCATTaGAGAGGCCATCCTTCCTTT +
Preference number: 2 (lower is better)
Translates to: DLRHDMLVQDGNIGGAVRSGCWH*RGHPSF
Trigger: AAAGGAAGGATGGCCTCTCCAATGCCAGCAGCCGGA...CCGCACAGCTCCACCTATGTTCCCGTCCTGGACAAGCATGTCGTGTCTAAGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
ENST00000489630.5
ENST00000495571.5
3UTR-3UTR CCA 90 bp CTTTCAGTGGCCAGAAGAGGAAAGCAGAGTTCCTCGCCTCCACATCCTCTACTTACCAGCCTCTGGATCTaGGCCAGCGTGCTGCAGGCT +
Preference number: 2 (lower is better)
Translates to: LSVARRGKQSSSPPHPLLTSLWI*ASVLQA
Trigger: AGCCTGCAGCACGCTGGCCCAGATCCAGAGGCTGGT...AAGTAGAGGATGTGGAGGCGAGGAACTCTGCTTTCCTCTTCTGGCCACTGAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432242.5
3UTR-3UTR TCA 90 bp ATAGTCTTGTCTCTCCCGGCTTCCAGCAGAGCATCCAGGCGGCCAGCCTCGCTCCAGTTTGCTCTTCATTaGGTGAGACGTGTCAATGAG +
Preference number: 2 (lower is better)
Translates to: IVLSLPASSRASRRPASLQFALH*VRRVNE
Trigger: CTCATTGACACGTCTCACTCAATGAAGAGCAAACTG...GAGCGAGGCTGGCCGCCTGGATGCTCTGCTGGAAGCCGGGAGAGACAAGACTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422503.6
ENST00000432242.5
3UTR-3UTR TCA 90 bp GATGAAGGAGGTGGACACGACCTTGGTGTCTCCGTAACTGAAGCCCACCAGTGCAGGACATCTGGCTTCTaGGCAGGCTGGTTTTGGTTG +
Preference number: 2 (lower is better)
Translates to: DEGGGHDLGVSVTEAHQCRTSGF*AGWFWL
Trigger: CAACCAAAACCAGCCTGCTCAGAAGCCAGATGTCCT...GCACTGGTGGGCTTCAGTTACGGAGACACCAAGGTCGTGTCCACCTCCTTCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
3UTR-3UTR TCA 90 bp ACCATTGTTAGAGCCTCTCGGCACAGATCAAGCTCCCCCTCCAGAATGCCGCCACGCACTGTTCCAAGATaGCACCAAAAATCTGCCGGC +
Preference number: 2 (lower is better)
Translates to: TIVRASRHRSSSPSRMPPRTVPR*HQKSAG
Trigger: GCCGGCAGATTTTTGGTGTCATCTTGGAACAGTGCG...TGGCGGCATTCTGGAGGGGGAGCTTGATCTGTGCCGAGAGGCTCTAACAATGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000432242.5
3UTR-3UTR CCA 90 bp CTGGGCCAGCGTGCTGCAGGCTTCCTCCATCTCTTGCCAAACGAGAAACACGTCTCTGACTCCAGCTCCTaGAGGGAGTTTTCCTTTCAG +
Preference number: 2 (lower is better)
Translates to: LGQRAAGFLHLLPNEKHVSDSSS*REFSFQ
Trigger: CTGAAAGGAAAACTCCCTCCAGGAGCTGGAGTCAGA...GACGTGTTTCTCGTTTGGCAAGAGATGGAGGAAGCCTGCAGCACGCTGGCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422503.6
ENST00000432242.5
3UTR CAA 90 bp CTTCGGATCCGGGCCAGGGCTGTGTGGATTCTCTCACTGTACCACTaGCACTTCTCTTTGGTAATGTTGACGTGGACCAAGCTCCCATCC +
Preference number: 2 (lower is better)
Translates to: LRIRARAVWILSLYH*HFSLVMLTWTKLPS
Trigger: GGATGGGAGCTTGGTCCACGTCAACATTACCAAAGAGAAGTGCAAGTGGTACAGTGAGAGAATCCACACAGCCCTGGCCCGGATCCGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422503.6
3UTR-3UTR TCA 90 bp CTCGTCTTGGCTCTCTGGAATCCTGCGTGTCCGCTTCTTTCAGTGGCCAGAAGATTGAACTCGGTTATGTaGGCCACCTGCTCCTGGAGA +
Preference number: 2 (lower is better)
Translates to: LVLALWNPACPLLSVARRLNSVM*ATCSWR
Trigger: TCTCCAGGAGCAGGTGGCTCACATAACCGAGTTCAA...TCTTCTGGCCACTGAAAGAAGCGGACACGCAGGATTCCAGAGAGCCAAGACGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432242.5
3UTR-3UTR GCA 90 bp CTTCTCTCGTCTTGGCTCTCTGGAATCCTGCGTGTCCGCTTCTTTCAGTGGCCAGTCGTTGCACACATGTaGCAGAGGGAACACCTCATC +
Preference number: 2 (lower is better)
Translates to: LLSSWLSGILRVRFFQWPVVAHM*QREHLI
Trigger: GATGAGGTGTTCCCTCTGGCACATGTGTGCAACGAC...TGGCCACTGAAAGAAGCGGACACGCAGGATTCCAGAGAGCCAAGACGAGAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
3UTR-3UTR CCA 90 bp TCCTCCGGCTGCTGGCATTGGAGAGGCCATCCTTCCTTTCACTGCAAGCTGAGCCCATTTAATCCGCACTaGTCTGCACGGACTCATTCT +
Preference number: 2 (lower is better)
Translates to: SSGCWHWRGHPSFHCKLSPFNPH*SARTHS
Trigger: AGAATGAGTCCGTGCAGACCAGTGCGGATTAAATGG...GCTCAGCTTGCAGTGAAAGGAAGGATGGCCTCTCCAATGCCAGCAGCCGGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
3UTR-3UTR CCA 90 bp CGGGGCCTTGTTTGCATAATTCTTCTTGGCAGCCTCCTGGAGTTCCATGGCCTGATTCTGAACAGCCTCTaGGGGAGTGGGATCCTTGCA +
Preference number: 2 (lower is better)
Translates to: RGLVCIILLGSLLEFHGLILNSL*GSGILA
Trigger: TGCAAGGATCCCACTCCCCCAGAGGCTGTTCAGAAT...CAGGCCATGGAACTCCAGGAGGCTGCCAAGAAGAATTATGCAAACAAGGCCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000495571.5
3UTR CAA 90 bp ATGCTCATTTCTTTGTCACTTAGAGCAGTCCTCCGGCTGCTGGCATaGGAGAGGCCATCCTTCCTTTCACTGCAAGCTGAGCTCCTGAGG +
Preference number: 2 (lower is better)
Translates to: MLISLSLRAVLRLLA*ERPSFLSLQAELLR
Trigger: CCTCAGGAGCTCAGCTTGCAGTGAAAGGAAGGATGGCCTCTCCAATGCCAGCAGCCGGAGGACTGCTCTAAGTGACAAAGAAATGAGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
ENST00000489630.5
ENST00000495571.5
3UTR CAA 90 bp TTCTTGTTCGTCTCCGCACTGGTCTGCACGGACTCATTCTCCGGTTaGGCTTTTATATCCACAACCCCATCAGCGTGGCGGAAAGAGCAG +
Preference number: 2 (lower is better)
Translates to: FLFVSALVCTDSFSG*AFISTTPSAWRKEQ
Trigger: CTGCTCTTTCCGCCACGCTGATGGGGTTGTGGATATAAAAGCCAAACCGGAGAATGAGTCCGTGCAGACCAGTGCGGAGACGAACAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422503.6
3UTR CAA 90 bp AGCTCCCATCCTTCCAGGGAGCATGGACAAACCTGCTGCAATATTTaGCATGGACTGTCTTCTTGTTCGTCTCCGCACTGGTCTGCACGG +
Preference number: 2 (lower is better)
Translates to: SSHPSREHGQTCCNI*HGLSSCSSPHWSAR
Trigger: CCGTGCAGACCAGTGCGGAGACGAACAAGAAGACAGTCCATGCAAAATATTGCAGCAGGTTTGTCCATGCTCCCTGGAAGGATGGGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422503.6
3UTR CAA 90 bp GCCAGGGCTGTGTGGATTCTCTCACTGTACCACTTGCACTTCTCTTaGGTAATGTTGACGTGGACCAAGCTCCCATCCTTCCAGGGAGCA +
Preference number: 2 (lower is better)
Translates to: ARAVWILSLYHLHFS*VMLTWTKLPSFQGA
Trigger: TGCTCCCTGGAAGGATGGGAGCTTGGTCCACGTCAACATTACCAAAGAGAAGTGCAAGTGGTACAGTGAGAGAATCCACACAGCCCTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422503.6
3UTR CAA 90 bp GCTGTATGGAATGAAGGAAACAGCTCCAGAGCGAGAGACTTGGGCTaGAAGCTCATCCAGCACTGCCCATCTGAATGGCCTAGGGCATGT +
Preference number: 2 (lower is better)
Translates to: AVWNEGNSSRARDLG*KLIQHCPSEWPRAC
Trigger: ACATGCCCTAGGCCATTCAGATGGGCAGTGCTGGATGAGCTTCAAGCCCAAGTCTCTCGCTCTGGAGCTGTTTCCTTCATTCCATACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000422503.6
ENST00000432242.5
ENST00000433678.5
ENST00000495571.5
3UTR CAA 90 bp GGTGGACACGACCTTGGTGTCTCCGTAACTGAAGCCCACCAGTGCTaGGGTGCGGCTCACACACTTCTTCACAACCCCTGGAAAATAAAA +
Preference number: 2 (lower is better)
Translates to: GGHDLGVSVTEAHQC*GAAHTLLHNPWKIK
Trigger: TTTTATTTTCCAGGGGTTGTGAAGAAGTGTGTGAGCCGCACCCAAGCACTGGTGGGCTTCAGTTACGGAGACACCAAGGTCGTGTCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
3UTR-3UTR TCA 90 bp GAGGGCGGCCTTACCTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCTTTTTCTTTTTCCTCTTaGGATAATGCTCGCCAAACA +
Preference number: 2 (lower is better)
Translates to: EGGLTSAEGPVSVSTLRSFSFSS*DNARQT
Trigger: TGTTTGGCGAGCATTATCTCAAGAGGAAAAAGAAAA...AGACCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGGTAAGGCCGCCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000489630.5
3UTR-3UTR CCA 90 bp TTGGCTTTTATATCCACAACCCCATCAGCGTGGCGGAAAGAGCAGTCGGCAAGCATCTCCAAGGCCCTCTaGAGGAGAAGCTCCTTGGAT +
Preference number: 2 (lower is better)
Translates to: LAFISTTPSAWRKEQSASISKAL*RRSSLD
Trigger: ATCCAAGGAGCTTCTCCTCCAGAGGGCCTTGGAGAT...GCTTGCCGACTGCTCTTTCCGCCACGCTGATGGGGTTGTGGATATAAAAGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422503.6
ENST00000432242.5
3UTR-3UTR CCA 90 bp TTGGCTTTTATATCCACAACCCCATCAGCGTGGCGGAAAGAGCAGTCGGCAAGCCTCTCGGCAAATGCGTaGAATCTGCTGTGGGTCTTG +
Preference number: 2 (lower is better)
Translates to: LAFISTTPSAWRKEQSASLSANA*NLLWVL
Trigger: CAAGACCCACAGCAGATTCCACGCATTTGCCGAGAG...GCTTGCCGACTGCTCTTTCCGCCACGCTGATGGGGTTGTGGATATAAAAGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422503.6
ENST00000432242.5
3UTR-3UTR CCA 90 bp TCAACAGAGGTTGTTTCTGACTCGCAGTCCACAGTGGCCACGTCGGGCTTGGGATCCTTCCAGGGAGCATaGACAAACCTGCTGCAATAT +
Preference number: 2 (lower is better)
Translates to: STEVVSDSQSTVATSGLGSFQGA*TNLLQY
Trigger: ATATTGCAGCAGGTTTGTCCATGCTCCCTGGAAGGA...TCCCAAGCCCGACGTGGCCACTGTGGACTGCGAGTCAGAAACAACCTCTGTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422503.6
3UTR-3UTR TCA 90 bp CTCTGGAATCCTGCGTGTCCGCTTCTTTCAGTGGCCAGAAGAGGAAAGCAGAGTTCGCGTCACCTTTTCTaGCGATTTGTCATCCAGCCA +
Preference number: 2 (lower is better)
Translates to: LWNPACPLLSVARRGKQSSRHLF*RFVIQP
Trigger: TGGCTGGATGACAAATCGTCAGAAAAGGTGACGCGA...ACTCTGCTTTCCTCTTCTGGCCACTGAAAGAAGCGGACACGCAGGATTCCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
3UTR-3UTR CCA 90 bp GACCTTAGACACGACATGCTTGTCCAGGACGGGAACATAGGTGGAGCTGTGCGGTATAACTGTTTCAGGTaGCTGATCAGGTCTCCCATC +
Preference number: 2 (lower is better)
Translates to: DLRHDMLVQDGNIGGAVRYNCFR*LIRSPI
Trigger: GATGGGAGACCTGATCAGCCACCTGAAACAGTTATA...CCGCACAGCTCCACCTATGTTCCCGTCCTGGACAAGCATGTCGTGTCTAAGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416277.5
ENST00000448638.5
3UTR-3UTR TCA 90 bp CAACAGAGGTTGTTTCTGACTCGCAGTCCACAGTGGCCACGTCGGGCTTGGGAGAGTGAGACGTGTCAATaGGAATGTAGATGCAATCAT +
Preference number: 2 (lower is better)
Translates to: QQRLFLTRSPQWPRRAWESETCQ*ECRCNH
Trigger: ATGATTGCATCTACATTCTCATTGACACGTCTCACT...CTCCCAAGCCCGACGTGGCCACTGTGGACTGCGAGTCAGAAACAACCTCTGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422503.6
ENST00000432242.5
3UTR-3UTR TCA 90 bp ATTTCTGTTGCTCTCCCGGGGCCTTGTTTGCATAATTCTTCTTGGCAGCCTCCTGTCAGATCTTCATTCTaGACAGCCTCTGGGGGAGTG +
Preference number: 2 (lower is better)
Translates to: ISVALPGPCLHNSSWQPPVRSSF*TASGGV
Trigger: CACTCCCCCAGAGGCTGTTCAGAATGAAGATCTGAC...AGGAGGCTGCCAAGAAGAATTATGCAAACAAGGCCCCGGGAGAGCAACAGAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000495571.5
3UTR-3UTR TCA 90 bp CTTCTCTCGTCTTGGCTCTCTGGAATCCTGCGTGTCCGCTTCTTTCAGTGGCCATTCTCCAGATCACTGTaGCCCTGTTCCATTTCCTTA +
Preference number: 2 (lower is better)
Translates to: LLSSWLSGILRVRFFQWPFSRSL*PCSISL
Trigger: TAAGGAAATGGAACAGGGTCACAGTGATCTGGAGAA...TGGCCACTGAAAGAAGCGGACACGCAGGATTCCAGAGAGCCAAGACGAGAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000495571.5
3UTR-3UTR TCA 90 bp GATGAAGGAGGTGGACACGACCTTGGTGTCTCCGTAACTGAAGCCCACCAGTGCTGTACCACCAGTCCATaGTCAAGGACTCAGAATAAA +
Preference number: 2 (lower is better)
Translates to: DEGGGHDLGVSVTEAHQCCTTSP*SRTQNK
Trigger: TTTATTCTGAGTCCTTGATCATGGACTGGTGGTACA...GCACTGGTGGGCTTCAGTTACGGAGACACCAAGGTCGTGTCCACCTCCTTCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000495571.5
3UTR-3UTR TCA 90 bp TCAAGGACTCAGAATAAAGGTCTTGCATCTTCTCCAGATCACTGTGACCCTGTTCGGGACTGCTGCCACTaGCAAGGCATCCATGAGGGT +
Preference number: 2 (lower is better)
Translates to: SRTQNKGLASSPDHCDPVRDCCH*QGIHEG
Trigger: ACCCTCATGGATGCCTTGTCAGTGGCAGCAGTCCCG...AACAGGGTCACAGTGATCTGGAGAAGATGCAAGACCTTTATTCTGAGTCCTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
ENST00000495571.5
3UTR-3UTR CCA 90 bp CTTTATCAGCAAAAGCAGTTTTCAGGGCACTCAGGGTGTTTGTGGAGCTTCCAAACAACCCCATCAGCGTaGCGGAAAGAGCAGTCGGCA +
Preference number: 2 (lower is better)
Translates to: LYQQKQFSGHSGCLWSFQTTPSA*RKEQSA
Trigger: TGCCGACTGCTCTTTCCGCCACGCTGATGGGGTTGT...TTGGAAGCTCCACAAACACCCTGAGTGCCCTGAAAACTGCTTTTGCTGATAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000422503.6
ENST00000432242.5
ENST00000448638.5
3UTR-3UTR CCA 90 bp TGTGTAGACTGGACACGGGATCTCCAAGGCCCTCTGGAGGAGAAGCTCCTTGGAACTCATTCTCCGGTTTaGCTTTTATATCCACAACCC +
Preference number: 2 (lower is better)
Translates to: CVDWTRDLQGPLEEKLLGTHSPV*LLYPQP
Trigger: GGGTTGTGGATATAAAAGCCAAACCGGAGAATGAGT...TCCAAGGAGCTTCTCCTCCAGAGGGCCTTGGAGATCCCGTGTCCAGTCTACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422503.6
ENST00000432242.5
3UTR-3UTR CCA 90 bp AAGACACATCTGAAGAATCGTGGTCATAAACCTGGCTTCCTTCTCGCGTCACCTTCCGGCTGCTGGCATTaGAGAGGCCATCCTTCCTTT +
Preference number: 2 (lower is better)
Translates to: KTHLKNRGHKPGFLLASPSGCWH*RGHPSF
Trigger: AAAGGAAGGATGGCCTCTCCAATGCCAGCAGCCGGA...AGGTGACGCGAGAAGGAAGCCAGGTTTATGACCACGATTCTTCAGATGTGTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
ENST00000489630.5
ENST00000495571.5
3UTR-3UTR TCA 90 bp GATCAGGTCTCCCATCGGTCAGAAGGTAGATTGCCTGTGTTTCTTTATCAGCAAACTGTTTCAGGTGGCTaGTCAGGTCTCCCATCGGTC +
Preference number: 2 (lower is better)
Translates to: DQVSHRSEGRLPVFLYQQTVSGG*SGLPSV
Trigger: GACCGATGGGAGACCTGATCAGCCACCTGAAACAGT...TTGCTGATAAAGAAACACAGGCAATCTACCTTCTGACCGATGGGAGACCTGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416277.5
ENST00000448638.5
3UTR-3UTR TCA 90 bp TGTCATCCAGCCACTCCTCAGCCAGCAAGATGCTCATTTCTTTGTCACTTAGAGCTTCTCCTCTGGCGTTaGAGGACACTGTGTAGACTG +
Preference number: 2 (lower is better)
Translates to: CHPATPQPARCSFLCHLELLLWR*RTLCRL
Trigger: CAGTCTACACAGTGTCCTTCAACGCCAGAGGAGAAG...CTCTAAGTGACAAAGAAATGAGCATCTTGCTGGCTGAGGAGTGGCTGGATGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432242.5
3UTR-3UTR TCA 90 bp TGGCCAGAAGAGGAAAGCAGAGTTCCTCGCCTCCACATCCTCTACTTCTGGATCATGTCCTGTCTAATGTaGGTTTCCTCATCTGTGGCT +
Preference number: 2 (lower is better)
Translates to: WPEEESRVPRLHILYFWIMSCLM*VSSSVA
Trigger: AGCCACAGATGAGGAAACTCACATTAGACAGGACAT...GATCCAGAAGTAGAGGATGTGGAGGCGAGGAACTCTGCTTTCCTCTTCTGGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000495571.5
3UTR-3UTR CCA 90 bp AGATGCAATCATTATGCAATCTTCCAAAGAGGCTTTGACTCCCATCCTGTAGCCACAACCCCATCAGCGTaGCGGAAAGAGCAGTCGGCA +
Preference number: 2 (lower is better)
Translates to: RCNHYAIFQRGFDSHPVATTPSA*RKEQSA
Trigger: TGCCGACTGCTCTTTCCGCCACGCTGATGGGGTTGT...GGCTACAGGATGGGAGTCAAAGCCTCTTTGGAAGATTGCATAATGATTGCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000422503.6
ENST00000432242.5
ENST00000448638.5
3UTR-3UTR CCA 90 bp AAGACACATCTGAAGAATCGTGGTCATAAACCTGGCTTCCTTCTCGCGTCACCTCAGCCTCTGGGGGAGTaGGATCCTTGCAACCAAAAT +
Preference number: 2 (lower is better)
Translates to: KTHLKNRGHKPGFLLASPQPLGE*DPCNQN
Trigger: ATTTTGGTTGCAAGGATCCCACTCCCCCAGAGGCTG...AGGTGACGCGAGAAGGAAGCCAGGTTTATGACCACGATTCTTCAGATGTGTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
ENST00000495571.5
3UTR-3UTR CCA 90 bp CTTCTCTCGTCTTGGCTCTCTGGAATCCTGCGTGTCCGCTTCTTTCAGTGGCCAGCTCTTTCAGTGAAATaGGCCAATTCAACCGTTCTA +
Preference number: 2 (lower is better)
Translates to: LLSSWLSGILRVRFFQWPALSVK*ANSTVL
Trigger: TAGAACGGTTGAATTGGCCCATTTCACTGAAAGAGC...TGGCCACTGAAAGAAGCGGACACGCAGGATTCCAGAGAGCCAAGACGAGAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
3UTR-3UTR TCA 90 bp TCCCGGGGCCTTGTTTGCATAATTCTTCTTGGCAGCCTCCTGGAGTTCCATGGCAGTGAGACGTGTCAATaGGAATGTAGATGCAATCAT +
Preference number: 2 (lower is better)
Translates to: SRGLVCIILLGSLLEFHGSETCQ*ECRCNH
Trigger: ATGATTGCATCTACATTCTCATTGACACGTCTCACT...GCCATGGAACTCCAGGAGGCTGCCAAGAAGAATTATGCAAACAAGGCCCCGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432242.5
3UTR-3UTR GCA 90 bp AGTCAGAAAAAGCCAGAACCAAGTCGTCAAACGGGTAGGGGAGGCAGCAGGGATCCTCAGCCAGCAAGATaGTCATTTCTTTGTCACTTA +
Preference number: 2 (lower is better)
Translates to: SQKKPEPSRQTGRGGSRDPQPAR*SFLCHL
Trigger: TAAGTGACAAAGAAATGAGCATCTTGCTGGCTGAGG...ATCCCTGCTGCCTCCCCTACCCGTTTGACGACTTGGTTCTGGCTTTTTCTGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000489630.5
3UTR-3UTR CCA 90 bp CAAGGACTCAGAATAAAGGTCTTGCATCTTCTCCAGATCACTGTGACCCTGTTCATTCTGAACAGCCTCTaGGGGAGTGGGATCCTTGCA +
Preference number: 2 (lower is better)
Translates to: QGLRIKVLHLLQITVTLFILNSL*GSGILA
Trigger: TGCAAGGATCCCACTCCCCCAGAGGCTGTTCAGAAT...GAACAGGGTCACAGTGATCTGGAGAAGATGCAAGACCTTTATTCTGAGTCCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000433678.5
ENST00000448638.5
ENST00000495571.5
3UTR-3UTR TCA 90 bp CTTTATCAGCAAAAGCAGTTTTCAGGGCACTCAGGGTGTTTGTGGAGCTTCCAACTTCCAAAGAGGCTTTaGCTCCCATCCTGTAGCCAT +
Preference number: 2 (lower is better)
Translates to: LYQQKQFSGHSGCLWSFQLPKRL*LPSCSH
Trigger: ATGGCTACAGGATGGGAGTCAAAGCCTCTTTGGAAG...TTGGAAGCTCCACAAACACCCTGAGTGCCCTGAAAACTGCTTTTGCTGATAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000422503.6
ENST00000432242.5
ENST00000448638.5
3UTR-3UTR TCA 90 bp TCAAGGACTCAGAATAAAGGTCTTGCATCTTCTCCAGATCACTGTGACCCTGTTGTCAGATCTTCATTCTaGACAGCCTCTGGGGGAGTG +
Preference number: 2 (lower is better)
Translates to: SRTQNKGLASSPDHCDPVVRSSF*TASGGV
Trigger: CACTCCCCCAGAGGCTGTTCAGAATGAAGATCTGAC...AACAGGGTCACAGTGATCTGGAGAAGATGCAAGACCTTTATTCTGAGTCCTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000433678.5
ENST00000448638.5
ENST00000495571.5
3UTR-3UTR GCA 90 bp GATCCTCAGGAATTGGGGGTGACTTTATATGAGAGCAAGAGAGCGCATACTTGTGCTTCCTCCATCTCTTaGCAAACGAGAAACACGTCC +
Preference number: 2 (lower is better)
Translates to: DPQELGVTLYESKRAHTCASSIS*QTRNTS
Trigger: GGACGTGTTTCTCGTTTGGCAAGAGATGGAGGAAGC...ACAAGTATGCGCTCTCTTGCTCTCATATAAAGTCACCCCCAATTCCTGAGGATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432242.5
3UTR-3UTR CCA 90 bp TATTTCTGCAGCCATGTCTTAGAGTCCCAGGTGTCTTCTGGATTCGATGCAATCGGAGGAGAAGCTCCTTaGATTCTTCAGGAACATCCC +
Preference number: 2 (lower is better)
Translates to: YFCSHVLESQVSSGFDAIGGEAP*ILQEHP
Trigger: GGGATGTTCCTGAAGAATCCAAGGAGCTTCTCCTCC...GATTGCATCGAATCCAGAAGACACCTGGGACTCTAAGACATGGCTGCAGAAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422503.6
ENST00000432242.5
3UTR-3UTR TCA 90 bp TGGAGTTCCATGGCCTGCTGGATGTACATTTTCCCAGCTAGGATTTCACTTTCCGAACAGATTTCCTTTTaGTGCTTGCTGTCTCCATCC +
Preference number: 2 (lower is better)
Translates to: WSSMACWMYIFPARISLSEQISF*CLLSPS
Trigger: GGATGGAGACAGCAAGCATCAAAAGGAAATCTGTTC...GGAAAGTGAAATCCTAGCTGGGAAAATGTACATCCAGCAGGCCATGGAACTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000495571.5
3UTR-3UTR TCA 90 bp GGATTGAATTGCCTGTTCCACTTTTCGCTTGTAGATATTGAGTTTGGCTCCTTGAGGACATCTGGCTTCTaGGCAGGCTGGTTTTGGTTG +
Preference number: 2 (lower is better)
Translates to: GLNCLFHFSLVDIEFGSLRTSGF*AGWFWL
Trigger: CAACCAAAACCAGCCTGCTCAGAAGCCAGATGTCCT...CAAGGAGCCAAACTCAATATCTACAAGCGAAAAGTGGAACAGGCAATTCAATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
3UTR-3UTR GCA 90 bp CAAGGACTCAGAATAAAGGTCTTGCATCTTCTCCAGATCACTGTGACCCTGTTCTTCCCGCCAAGCAACTaGTTGACCATCAAACTTCAC +
Preference number: 2 (lower is better)
Translates to: QGLRIKVLHLLQITVTLFFPPSN*LTIKLH
Trigger: GTGAAGTTTGATGGTCAAGCAGTTGCTTGGCGGGAA...GAACAGGGTCACAGTGATCTGGAGAAGATGCAAGACCTTTATTCTGAGTCCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
3UTR-3UTR CCA 90 bp CCCATGGTCCCTTCAACATATTCAGAGATGAAGTTTGTGTTGAATCGACATCAGATTCTGAACAGCCTCTaGGGGAGTGGGATCCTTGCA +
Preference number: 2 (lower is better)
Translates to: PMVPSTYSEMKFVLNRHQILNSL*GSGILA
Trigger: TGCAAGGATCCCACTCCCCCAGAGGCTGTTCAGAAT...CTGATGTCGATTCAACACAAACTTCATCTCTGAATATGTTGAAGGGACCATGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
ENST00000495571.5
3UTR-3UTR CCA 90 bp TTTGATCTGAAAGGCCCCATGGTCCCTTCAACATATTCAGAGATGAAGTTTGTGCTCTCGGCAAATGCGTaGAATCTGCTGTGGGTCTTG +
Preference number: 2 (lower is better)
Translates to: FDLKGPMVPSTYSEMKFVLSANA*NLLWVL
Trigger: CAAGACCCACAGCAGATTCCACGCATTTGCCGAGAG...CACAAACTTCATCTCTGAATATGTTGAAGGGACCATGGGGCCTTTCAGATCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432242.5
3UTR-3UTR TCA 90 bp CTGAAGACACATCTGAAGAATCGTGGTCATAAACCTGGCTTCCTTCTCGCGTCATTGCTCTTCATTGAGTaGGACGTGTCAATGAGAATG +
Preference number: 2 (lower is better)
Translates to: LKTHLKNRGHKPGFLLASLLFIE*DVSMRM
Trigger: CATTCTCATTGACACGTCTCACTCAATGAAGAGCAA...TGACGCGAGAAGGAAGCCAGGTTTATGACCACGATTCTTCAGATGTGTCTTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
3UTR-3UTR TCA 90 bp TTTGACCTGGTCTATAACTGTTTCAGGTGGCTGATCAGGTCTCCCATCGGTCAGCCAAATTATCTTCATTaGCTTCAGCAAGTTGTTCCC +
Preference number: 2 (lower is better)
Translates to: FDLVYNCFRWLIRSPIGQPNYLH*LQQVVP
Trigger: GGGAACAACTTGCTGAAGTCAATGAAGATAATTTGG...CTGACCGATGGGAGACCTGATCAGCCACCTGAAACAGTTATAGACCAGGTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416277.5
ENST00000448638.5
3UTR-3UTR TCA 90 bp TCAGTTTACCTCATCAAAGACCTTAGACACGACATGCTTGTCCAGGACGGGAACTGTACCACCAGTCCATaGTCAAGGACTCAGAATAAA +
Preference number: 2 (lower is better)
Translates to: SVYLIKDLRHDMLVQDGNCTTSP*SRTQNK
Trigger: TTTATTCTGAGTCCTTGATCATGGACTGGTGGTACA...GTTCCCGTCCTGGACAAGCATGTCGTGTCTAAGGTCTTTGATGAGGTAAACTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416277.5
ENST00000448638.5
3UTR-3UTR TCA 90 bp GATCAAGGACTCAGAATAAAGGTCTTGCATCTTCTCCAGATCACTGTGACCCTGTGGCAGGGTAGGCTGTaGTACTTGAATATTTGCTGT +
Preference number: 2 (lower is better)
Translates to: DQGLRIKVLHLLQITVTLWQGRL*YLNICC
Trigger: ACAGCAAATATTCAAGTATCACAGCCTACCCTGCCA...CAGGGTCACAGTGATCTGGAGAAGATGCAAGACCTTTATTCTGAGTCCTTGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433678.5
3UTR-3UTR GCA 90 bp AAGACACATCTGAAGAATCGTGGTCATAAACCTGGCTTCCTTCTCGCGTCACCTGGTCAGAAGGTAGATTaGCTGTGTTTCTTTATCAGC +
Preference number: 2 (lower is better)
Translates to: KTHLKNRGHKPGFLLASPGQKVD*LCFFIS
Trigger: GCTGATAAAGAAACACAGGCAATCTACCTTCTGACC...AGGTGACGCGAGAAGGAAGCCAGGTTTATGACCACGATTCTTCAGATGTGTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
3UTR-3UTR GCA 90 bp ATTTTCCCAGCTAGGATTTCACTTTCCAGCATCGACAGCTCTTTCAGTGAAATGACCTTAGACACGACATaGTTGTCCAGGACGGGAACA +
Preference number: 2 (lower is better)
Translates to: IFPARISLSSIDSSFSEMTLDTT*LSRTGT
Trigger: TGTTCCCGTCCTGGACAAGCATGTCGTGTCTAAGGT...CATTTCACTGAAAGAGCTGTCGATGCTGGAAAGTGAAATCCTAGCTGGGAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
3UTR-3UTR GCA 90 bp TCAGTCTTGCAGATCTCAGACAAGTTACCGAGTCTGAATTTCAGTCCTAATATTGCTCCCCCTCCAGAATaGCGCCAAAATCCAGCACTA +
Preference number: 2 (lower is better)
Translates to: SVLQISDKLPSLNFSPNIAPPPE*RQNPAL
Trigger: TAGTGCTGGATTTTGGCGGCATTCTGGAGGGGGAGC...AATATTAGGACTGAAATTCAGACTCGGTAACTTGTCTGAGATCTGCAAGACTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432242.5
3UTR-3UTR CCA 90 bp CTTTTCTGCATTGTACCACCAGTCCATGATCAAGGACTCAGAATAAAGGTCTTGGGAGGAGAAGCTCCTTaGATTCTTCAGGAACATCCC +
Preference number: 2 (lower is better)
Translates to: LFCIVPPVHDQGLRIKVLGGEAP*ILQEHP
Trigger: GGGATGTTCCTGAAGAATCCAAGGAGCTTCTCCTCC...CAAGACCTTTATTCTGAGTCCTTGATCATGGACTGGTGGTACAATGCAGAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432242.5
3UTR-3UTR CCA 90 bp TTCATAGGATTGAATTGCCTGTTCCACTTTTCGCTTGTAGATATTGAGTTTGGCGCGTGGAATCTGCTGTaGGTCTTGGCACTCAGATCC +
Preference number: 2 (lower is better)
Translates to: FIGLNCLFHFSLVDIEFGAWNLL*VLALRS
Trigger: GGATCTGAGTGCCAAGACCCACAGCAGATTCCACGC...GCCAAACTCAATATCTACAAGCGAAAAGTGGAACAGGCAATTCAATCCTATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432242.5
3UTR-3UTR CCA 90 bp TGGCCAGAAGAGGAAAGCAGAGTTCCTCGCCTCCACATCCTCTACTTCTGGATCTATAACTGTTTCAGGTaGAATGATACACATGACAGT +
Preference number: 2 (lower is better)
Translates to: WPEEESRVPRLHILYFWIYNCFR*NDTHDS
Trigger: ACTGTCATGTGTATCATTCCACCTGAAACAGTTATA...GATCCAGAAGTAGAGGATGTGGAGGCGAGGAACTCTGCTTTCCTCTTCTGGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000495571.5
3UTR CAA 90 bp CCAGGACTGAGCCTGTTCCAAATTATCTTCATTGACTTCAGCAAGTaGTTCCCGCCAAGCAACTGCTTGACCATCAAACTTCACAAAGTT +
Preference number: 2 (lower is better)
Translates to: PGLSLFQIIFIDFSK*FPPSNCLTIKLHKV
Trigger: AACTTTGTGAAGTTTGATGGTCAAGCAGTTGCTTGGCGGGAACAACTTGCTGAAGTCAATGAAGATAATTTGGAACAGGCTCAGTCCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000422503.6
ENST00000432242.5
ENST00000448638.5
3UTR CAA 90 bp TGCATTGTACCACCAGTCCATGATCAAGGACTCAGAATAAAGGTCTaGCATCTTCTCCAGATCACTGTGACCCTGTTCCATTTCCTTAAC +
Preference number: 2 (lower is better)
Translates to: CIVPPVHDQGLRIKV*HLLQITVTLFHFLN
Trigger: GTTAAGGAAATGGAACAGGGTCACAGTGATCTGGAGAAGATGCAAGACCTTTATTCTGAGTCCTTGATCATGGACTGGTGGTACAATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000433678.5
ENST00000448638.5
ENST00000495571.5
3UTR CAA 90 bp AGTTTGGCTCCTTGGGGGTTAATTAATGTCATCTTATTTGTGTCGTaGCACACATGTGCCAGAGGGAACACCTCATCAAAGACCTTAGAC +
Preference number: 2 (lower is better)
Translates to: SLAPWGLINVILFVS*HTCARGNTSSKTLD
Trigger: GTCTAAGGTCTTTGATGAGGTGTTCCCTCTGGCACATGTGTGCAACGACACAAATAAGATGACATTAATTAACCCCCAAGGAGCCAAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
3UTR-3UTR GCA 90 bp TTGGCTCCTTGGGGGTTAATTAATGTCATCTTATTTGTGTCGTTGCACACATGTTGTTCTCTCGGCAAATaGGTGGAATCTGCTGTGGGT +
Preference number: 2 (lower is better)
Translates to: LAPWGLINVILFVSLHTCCSLGK*VESAVG
Trigger: ACCCACAGCAGATTCCACGCATTTGCCGAGAGAACA...ACATGTGTGCAACGACACAAATAAGATGACATTAATTAACCCCCAAGGAGCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432242.5
3UTR-3UTR GCA 90 bp TTAATTAATGTCATCTTATTTGTGTCGTTGCACACATGTGCCAGAGGGAACACCATGACACCAAAAATCTaGCGGCTCTTGCTGGTGAGC +
Preference number: 2 (lower is better)
Translates to: LINVILFVSLHTCARGNTMTPKI*RLLLVS
Trigger: GCTCACCAGCAAGAGCCGGCAGATTTTTGGTGTCAT...GGTGTTCCCTCTGGCACATGTGTGCAACGACACAAATAAGATGACATTAATTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432242.5
3UTR-3UTR CCA 90 bp CAAAATTATAAAAATGGAACTCTCCTCCAGTCAAAGCAGCAACCTCTTTCAAAAACAACCCCATCAGCGTaGCGGAAAGAGCAGTCGGCA +
Preference number: 2 (lower is better)
Translates to: QNYKNGTLLQSKQQPLSKTTPSA*RKEQSA
Trigger: TGCCGACTGCTCTTTCCGCCACGCTGATGGGGTTGT...TTTTGAAAGAGGTTGCTGCTTTGACTGGAGGAGAGTTCCATTTTTATAATTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
3UTR-3UTR CCA 90 bp ACACATCTGAAGAATCGTGGTCATAAACCTGGCTTCCTTCTCGCGTCACCTTTTACTCATTCTCCGGTTTaGCTTTTATATCCACAACCC +
Preference number: 2 (lower is better)
Translates to: THLKNRGHKPGFLLASPFTHSPV*LLYPQP
Trigger: GGGTTGTGGATATAAAAGCCAAACCGGAGAATGAGT...AAAAGGTGACGCGAGAAGGAAGCCAGGTTTATGACCACGATTCTTCAGATGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
3UTR-3UTR CCA 90 bp CCACCAGTCCATGATCAAGGACTCAGAATAAAGGTCTTGCATCTTCTCCAGATCCACTCAGGGTGTTTGTaGAGCTTCCAATCTTTATGT +
Preference number: 2 (lower is better)
Translates to: PPVHDQGLRIKVLHLLQIHSGCL*SFQSLC
Trigger: ACATAAAGATTGGAAGCTCCACAAACACCCTGAGTG...GATCTGGAGAAGATGCAAGACCTTTATTCTGAGTCCTTGATCATGGACTGGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
3UTR-3UTR CCA 90 bp TTAGAGTCCCAGGTGTCTTCTGGATTCGATGCAATCTCAACAGAGGTTGTTTCTATCTGCTGTGGGTCTTaGCACTCAGATCCTTTAGAA +
Preference number: 2 (lower is better)
Translates to: LESQVSSGFDAISTEVVSICCGS*HSDPLE
Trigger: TTCTAAAGGATCTGAGTGCCAAGACCCACAGCAGAT...AGAAACAACCTCTGTTGAGATTGCATCGAATCCAGAAGACACCTGGGACTCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422503.6
ENST00000432242.5
3UTR-3UTR CCA 90 bp GGATGTACATTTTCCCAGCTAGGATTTCACTTTCCAGCATCGACAGCTCTTTCAATCTGCTGTGGGTCTTaGCACTCAGATCCTTTAGAA +
Preference number: 2 (lower is better)
Translates to: GCTFSQLGFHFPASTALSICCGS*HSDPLE
Trigger: TTCTAAAGGATCTGAGTGCCAAGACCCACAGCAGAT...TGAAAGAGCTGTCGATGCTGGAAAGTGAAATCCTAGCTGGGAAAATGTACATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432242.5
3UTR-3UTR TCA 90 bp AGATTGCGGGCTTGGATCCTGACTATGCTGACTGCTAAACAATTTGAAAGTCCTTTGCTCTTCATTGAGTaGGACGTGTCAATGAGAATG +
Preference number: 2 (lower is better)
Translates to: RLRAWILTMLTAKQFESPLLFIE*DVSMRM
Trigger: CATTCTCATTGACACGTCTCACTCAATGAAGAGCAA...AGGACTTTCAAATTGTTTAGCAGTCAGCATAGTCAGGATCCAAGCCCGCAATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432242.5
3UTR-3UTR TCA 90 bp AGAATAAAGGTCTTGCATCTTCTCCAGATCACTGTGACCCTGTTCCATTTCCTTCAGTTTGCTCTTCATTaGGTGAGACGTGTCAATGAG +
Preference number: 2 (lower is better)
Translates to: RIKVLHLLQITVTLFHFLQFALH*VRRVNE
Trigger: CTCATTGACACGTCTCACTCAATGAAGAGCAAACTG...AAGGAAATGGAACAGGGTCACAGTGATCTGGAGAAGATGCAAGACCTTTATTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
3UTR-3UTR TCA 90 bp AATTTCCTGAAAACGTTTGACCTGGTCTATAACTGTTTCAGGTGGCTGATCAGGCAGTTTGCTCTTCATTaGGTGAGACGTGTCAATGAG +
Preference number: 2 (lower is better)
Translates to: NFLKTFDLVYNCFRWLIRQFALH*VRRVNE
Trigger: CTCATTGACACGTCTCACTCAATGAAGAGCAAACTG...CCTGATCAGCCACCTGAAACAGTTATAGACCAGGTCAAACGTTTTCAGGAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416277.5
ENST00000448638.5
3UTR-3UTR TCA 90 bp AGGCCCCATGGTCCCTTCAACATATTCAGAGATGAAGTTTGTGTTGAATCGACATGTTCCTGTATGAACTaGATGATCTTGTCCTTCACC +
Preference number: 2 (lower is better)
Translates to: RPHGPFNIFRDEVCVESTCSCMN*MILSFT
Trigger: GGTGAAGGACAAGATCATTCAGTTCATACAGGAACA...TGTCGATTCAACACAAACTTCATCTCTGAATATGTTGAAGGGACCATGGGGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
3UTR-3UTR TCA 90 bp CTTCAAGCCATATTTCTGCAGCCATGTCTTAGAGTCCCAGGTGTCTTCTGGATTCCAAATTATCTTCATTaGCTTCAGCAAGTTGTTCCC +
Preference number: 2 (lower is better)
Translates to: LQAIFLQPCLRVPGVFWIPNYLH*LQQVVP
Trigger: GGGAACAACTTGCTGAAGTCAATGAAGATAATTTGG...AATCCAGAAGACACCTGGGACTCTAAGACATGGCTGCAGAAATATGGCTTGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422503.6
ENST00000432242.5
3UTR-3UTR TCA 90 bp TTAGAGTCCCAGGTGTCTTCTGGATTCGATGCAATCTCAACAGAGGTTGTTTCTTCTCTAATCCAGGACTaGGCCTGTTCCAAATTATCT +
Preference number: 2 (lower is better)
Translates to: LESQVSSGFDAISTEVVSSLIQD*ACSKLS
Trigger: AGATAATTTGGAACAGGCTCAGTCCTGGATTAGAGA...AGAAACAACCTCTGTTGAGATTGCATCGAATCCAGAAGACACCTGGGACTCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422503.6
ENST00000432242.5
3UTR-3UTR TCA 90 bp TTTGATCTGAAAGGCCCCATGGTCCCTTCAACATATTCAGAGATGAAGTTTGTGTTCTCCAGATCACTGTaGCCCTGTTCCATTTCCTTA +
Preference number: 2 (lower is better)
Translates to: FDLKGPMVPSTYSEMKFVFSRSL*PCSISL
Trigger: TAAGGAAATGGAACAGGGTCACAGTGATCTGGAGAA...CACAAACTTCATCTCTGAATATGTTGAAGGGACCATGGGGCCTTTCAGATCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
ENST00000495571.5
3UTR-3UTR TCA 90 bp AACCTGATTCAGAATGCTGATGAGAACAGTGGCATATTTTGCAGGTCAGGTTGGTGTACCACCAGTCCATaGTCAAGGACTCAGAATAAA +
Preference number: 2 (lower is better)
Translates to: NLIQNADENSGIFCRSGWCTTSP*SRTQNK
Trigger: TTTATTCTGAGTCCTTGATCATGGACTGGTGGTACA...CCAACCTGACCTGCAAAATATGCCACTGTTCTCATCAGCATTCTGAATCAGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432242.5
3UTR-3UTR GCA 90 bp AATGGAACTCTCCTCCAGTCAAAGCAGCAACCTCTTTCAAAAACCTGTTTGCAATCACCAAGTCCAGTTTaGTCTTCATTGAGTGAGACG +
Preference number: 2 (lower is better)
Translates to: NGTLLQSKQQPLSKTCLQSPSPV*SSLSET
Trigger: CGTCTCACTCAATGAAGAGCAAACTGGACTTGGTGA...TTGCAAACAGGTTTTTGAAAGAGGTTGCTGCTTTGACTGGAGGAGAGTTCCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
3UTR-3UTR GCA 90 bp GGATTGAATTGCCTGTTCCACTTTTCGCTTGTAGATATTGAGTTTGGCTCCTTGTCACCAAGTCCAGTTTaGTCTTCATTGAGTGAGACG +
Preference number: 2 (lower is better)
Translates to: GLNCLFHFSLVDIEFGSLSPSPV*SSLSET
Trigger: CGTCTCACTCAATGAAGAGCAAACTGGACTTGGTGA...CAAGGAGCCAAACTCAATATCTACAAGCGAAAAGTGGAACAGGCAATTCAATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432242.5
3UTR-3UTR GCA 90 bp CCCATGGTCCCTTCAACATATTCAGAGATGAAGTTTGTGTTGAATCGACATCAGTCACCAAGTCCAGTTTaGTCTTCATTGAGTGAGACG +
Preference number: 2 (lower is better)
Translates to: PMVPSTYSEMKFVLNRHQSPSPV*SSLSET
Trigger: CGTCTCACTCAATGAAGAGCAAACTGGACTTGGTGA...CTGATGTCGATTCAACACAAACTTCATCTCTGAATATGTTGAAGGGACCATGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
3UTR-3UTR GCA 90 bp TTAGAGTCCCAGGTGTCTTCTGGATTCGATGCAATCTCAACAGAGGTTGTTTCTGGTCAGAAGGTAGATTaGCTGTGTTTCTTTATCAGC +
Preference number: 2 (lower is better)
Translates to: LESQVSSGFDAISTEVVSGQKVD*LCFFIS
Trigger: GCTGATAAAGAAACACAGGCAATCTACCTTCTGACC...AGAAACAACCTCTGTTGAGATTGCATCGAATCCAGAAGACACCTGGGACTCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422503.6
ENST00000432242.5
3UTR-3UTR GCA 90 bp GATCCTCAGGAATTGGGGGTGACTTTATATGAGAGCAAGAGAGCGCATACTTGTTTTCCTTTTGATGCTTaGTGTCTCCATCCTTTTCTG +
Preference number: 2 (lower is better)
Translates to: DPQELGVTLYESKRAHTCFPFDA*CLHPFL
Trigger: CAGAAAAGGATGGAGACAGCAAGCATCAAAAGGAAA...ACAAGTATGCGCTCTCTTGCTCTCATATAAAGTCACCCCCAATTCCTGAGGATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000495571.5
3UTR-3UTR GCA 90 bp CTTCAAGCCATATTTCTGCAGCCATGTCTTAGAGTCCCAGGTGTCTTCTGGATTATCCTTTGTGGAGAATaGAGGAAATTCTACACACTC +
Preference number: 2 (lower is better)
Translates to: LQAIFLQPCLRVPGVFWIILCGE*RKFYTL
Trigger: GAGTGTGTAGAATTTCCTGCATTCTCCACAAAGGAT...AATCCAGAAGACACCTGGGACTCTAAGACATGGCTGCAGAAATATGGCTTGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422503.6
ENST00000432242.5
3UTR-3UTR CCA 90 bp TTCCTGTATGAACTGAATGATCTTGTCCTTCACCAAGTCCAGTTTGCTCTTCATCCATTTAATCCGCACTaGTCTGCACGGACTCATTCT +
Preference number: 2 (lower is better)
Translates to: FLYELNDLVLHQVQFALHPFNPH*SARTHS
Trigger: AGAATGAGTCCGTGCAGACCAGTGCGGATTAAATGG...ATGAAGAGCAAACTGGACTTGGTGAAGGACAAGATCATTCAGTTCATACAGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
3UTR-3UTR CCA 90 bp ATTTTCCCAGCTAGGATTTCACTTTCCAGCATCGACAGCTCTTTCAGTGAAATGCTGTCTTCAGCTGTATaGAATGAAGGAAACAGCTCC +
Preference number: 2 (lower is better)
Translates to: IFPARISLSSIDSSFSEMLSSAV*NEGNSS
Trigger: GGAGCTGTTTCCTTCATTCCATACAGCTGAAGACAG...CATTTCACTGAAAGAGCTGTCGATGCTGGAAAGTGAAATCCTAGCTGGGAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000495571.5
3UTR CAA 90 bp CTTTCAGTTTCCTTGAATTCCAAGTCATCACATTGTCACCATCCTTaGTGGAGAATGCAGGAAATTCTACACACTCTGTTCTCTCGGCAA +
Preference number: 2 (lower is better)
Translates to: LSVSLNSKSSHCHHP*WRMQEILHTLFSRQ
Trigger: TTGCCGAGAGAACAGAGTGTGTAGAATTTCCTGCATTCTCCACAAAGGATGGTGACAATGTGATGACTTGGAATTCAAGGAAACTGAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422503.6
ENST00000432242.5
3UTR CAA 90 bp GGAGGGAGTTTTCCTTTCAGTTTCCTTGAATTCCAAGTCATCACATaGTCACCATCCTTTGTGGAGAATGCAGGAAATTCTACACACTCT +
Preference number: 2 (lower is better)
Translates to: GGSFPFSFLEFQVIT*SPSFVENAGNSTHS
Trigger: AGAGTGTGTAGAATTTCCTGCATTCTCCACAAAGGATGGTGACAATGTGATGACTTGGAATTCAAGGAAACTGAAAGGAAAACTCCCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422503.6
ENST00000432242.5
3UTR-3UTR TCA 90 bp AATTATAAAAATGGAACTCTCCTCCAGTCAAAGCAGCAACCTCTTTCAAAAACCCTTCCAAAGAGGCTTTaGCTCCCATCCTGTAGCCAT +
Preference number: 2 (lower is better)
Translates to: NYKNGTLLQSKQQPLSKTLPKRL*LPSCSH
Trigger: ATGGCTACAGGATGGGAGTCAAAGCCTCTTTGGAAG...GGTTTTTGAAAGAGGTTGCTGCTTTGACTGGAGGAGAGTTCCATTTTTATAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
3UTR-3UTR TCA 90 bp GAGAATGTAGATGCAATCATTATGCAATCTTCCAAAGAGGCTTTGACTCCCATCGAACAGATTTCCTTTTaGTGCTTGCTGTCTCCATCC +
Preference number: 2 (lower is better)
Translates to: ENVDAIIMQSSKEALTPIEQISF*CLLSPS
Trigger: GGATGGAGACAGCAAGCATCAAAAGGAAATCTGTTC...GATGGGAGTCAAAGCCTCTTTGGAAGATTGCATAATGATTGCATCTACATTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
3UTR-3UTR TCA 90 bp TATTTCTGCAGCCATGTCTTAGAGTCCCAGGTGTCTTCTGGATTCGATGCAATCTCCTTTCAGTTTCCTTaGATTCCAAGTCATCACATT +
Preference number: 2 (lower is better)
Translates to: YFCSHVLESQVSSGFDAISFQFP*IPSHHI
Trigger: AATGTGATGACTTGGAATTCAAGGAAACTGAAAGGA...GATTGCATCGAATCCAGAAGACACCTGGGACTCTAAGACATGGCTGCAGAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422503.6
ENST00000432242.5
3UTR-3UTR GCA 90 bp CTTTATGTCTCTAATCCAGGACTGAGCCTGTTCCAAATTATCTTCATTGACTTCTTCCCGCCAAGCAACTaGTTGACCATCAAACTTCAC +
Preference number: 2 (lower is better)
Translates to: LYVSNPGLSLFQIIFIDFFPPSN*LTIKLH
Trigger: GTGAAGTTTGATGGTCAAGCAGTTGCTTGGCGGGAA...GAAGTCAATGAAGATAATTTGGAACAGGCTCAGTCCTGGATTAGAGACATAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000422503.6
ENST00000432242.5
ENST00000448638.5
3UTR-3UTR GCA 90 bp TCAAGGACTCAGAATAAAGGTCTTGCATCTTCTCCAGATCACTGTGACCCTGTTTTTCCTTTTGATGCTTaGTGTCTCCATCCTTTTCTG +
Preference number: 2 (lower is better)
Translates to: SRTQNKGLASSPDHCDPVFPFDA*CLHPFL
Trigger: CAGAAAAGGATGGAGACAGCAAGCATCAAAAGGAAA...AACAGGGTCACAGTGATCTGGAGAAGATGCAAGACCTTTATTCTGAGTCCTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
ENST00000495571.5
3UTR-3UTR TCA 90 bp AAACGTTTGACCTGGTCTATAACTGTTTCAGGTGGAATGATACACATGACAGTCTGTACCACCAGTCCATaGTCAAGGACTCAGAATAAA +
Preference number: 2 (lower is better)
Translates to: KRLTWSITVSGGMIHMTVCTTSP*SRTQNK
Trigger: TTTATTCTGAGTCCTTGATCATGGACTGGTGGTACA...GACTGTCATGTGTATCATTCCACCTGAAACAGTTATAGACCAGGTCAAACGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000433678.5
ENST00000495571.5
3UTR-3UTR TCA 90 bp TTGTTTTCCAAGTACTGTATTGGTTTGTTTGCATCTAACCTGATTCAGAATGCTTCGCGTCACCTTTTCTaGCGATTTGTCATCCAGCCA +
Preference number: 2 (lower is better)
Translates to: LFSKYCIGLFASNLIQNASRHLF*RFVIQP
Trigger: TGGCTGGATGACAAATCGTCAGAAAAGGTGACGCGA...AGCATTCTGAATCAGGTTAGATGCAAACAAACCAATACAGTACTTGGAAAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432242.5
3UTR-3UTR TCA 90 bp TTCCTGTATGAACTGAATGATCTTGTCCTTCACCAAGTCCAGTTTGCTCTTCATAGTGAGACGTGTCAATaGGAATGTAGATGCAATCAT +
Preference number: 2 (lower is better)
Translates to: FLYELNDLVLHQVQFALHSETCQ*ECRCNH
Trigger: ATGATTGCATCTACATTCTCATTGACACGTCTCACT...ATGAAGAGCAAACTGGACTTGGTGAAGGACAAGATCATTCAGTTCATACAGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000422503.6
ENST00000432242.5
ENST00000448638.5
3UTR-3UTR TCA 90 bp TATAAAAATGGAACTCTCCTCCAGTCAAAGCAGCAACCTCTTTCAAAAACCTGTTTGCTCTTCATTGAGTaGGACGTGTCAATGAGAATG +
Preference number: 2 (lower is better)
Translates to: YKNGTLLQSKQQPLSKTCLLFIE*DVSMRM
Trigger: CATTCTCATTGACACGTCTCACTCAATGAAGAGCAA...ACAGGTTTTTGAAAGAGGTTGCTGCTTTGACTGGAGGAGAGTTCCATTTTTATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
3UTR-3UTR TCA 90 bp GTGAGACGTGTCAATGAGAATGTAGATGCAATCATTATGCAATCTTCCAAAGAGTCTCTAATCCAGGACTaGGCCTGTTCCAAATTATCT +
Preference number: 2 (lower is better)
Translates to: VRRVNENVDAIIMQSSKESLIQD*ACSKLS
Trigger: AGATAATTTGGAACAGGCTCAGTCCTGGATTAGAGA...CTCTTTGGAAGATTGCATAATGATTGCATCTACATTCTCATTGACACGTCTCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000422503.6
ENST00000432242.5
ENST00000448638.5
3UTR-3UTR TCA 90 bp TCAGTCTTGCAGATCTCAGACAAGTTACCGAGTCTGAATTTCAGTCCTAATATTTCTCTAATCCAGGACTaGGCCTGTTCCAAATTATCT +
Preference number: 2 (lower is better)
Translates to: SVLQISDKLPSLNFSPNISLIQD*ACSKLS
Trigger: AGATAATTTGGAACAGGCTCAGTCCTGGATTAGAGA...AATATTAGGACTGAAATTCAGACTCGGTAACTTGTCTGAGATCTGCAAGACTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432242.5
3UTR-3UTR TCA 90 bp GTGAGACGTGTCAATGAGAATGTAGATGCAATCATTATGCAATCTTCCAAAGAGGAATCGACATCAGATTaGGGCTTTGCACACTTTTCT +
Preference number: 2 (lower is better)
Translates to: VRRVNENVDAIIMQSSKEESTSD*GFAHFS
Trigger: AGAAAAGTGTGCAAAGCCTCAATCTGATGTCGATTC...CTCTTTGGAAGATTGCATAATGATTGCATCTACATTCTCATTGACACGTCTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
3UTR CAA 90 bp CTAAATGAAAATGTCAGGAAACTATACAGTAGGGGATGTTCAGTCTaGCAGATCTCAGACAAGTTACCGAGTCTGAATTTCAGTCCTAAT +
Preference number: 2 (lower is better)
Translates to: LNENVRKLYSRGCSV*QISDKLPSLNFSPN
Trigger: ATTAGGACTGAAATTCAGACTCGGTAACTTGTCTGAGATCTGCAAGACTGAACATCCCCTACTGTATAGTTTCCTGACATTTTCATTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
3UTR-3UTR TCA 90 bp TTAATTAATGTCATCTTATTTGTGTCGTTGCACACATGTGCCAGAGGGAACACCTCCTTTCAGTTTCCTTaGATTCCAAGTCATCACATT +
Preference number: 2 (lower is better)
Translates to: LINVILFVSLHTCARGNTSFQFP*IPSHHI
Trigger: AATGTGATGACTTGGAATTCAAGGAAACTGAAAGGA...GGTGTTCCCTCTGGCACATGTGTGCAACGACACAAATAAGATGACATTAATTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432242.5
3UTR-3UTR CCA 90 bp TTCATAGGATTGAATTGCCTGTTCCACTTTTCGCTTGTAGATATTGAGTTTGGCTGTCACCATCCTTTGTaGAGAATGCAGGAAATTCTA +
Preference number: 2 (lower is better)
Translates to: FIGLNCLFHFSLVDIEFGCHHPL*RMQEIL
Trigger: TAGAATTTCCTGCATTCTCCACAAAGGATGGTGACA...GCCAAACTCAATATCTACAAGCGAAAAGTGGAACAGGCAATTCAATCCTATGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432242.5
3UTR TCA 72 bp GCTCGGGGTGTGTCCCCTGGCAGGACCCATGGGAGCTaGTGCCGTGGGAGGAGCCGTCCGAGTCCGAGGGCG +
Preference number: 3 (lower is better)
Translates to: ARGVSPGRTHGS*CRGRSRPSPRA
Trigger: CGCCCTCGGACTCGGACGGCTCCTCCCACGGCATCAGCTCCCATGGGTCCTGCCAGGGGACACACCCCGAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
3UTR GCA 72 bp CCGTGGGAGGAGCCGTCCGAGTCCGAGGGCGCCGCCTaGTGGAGTGGCTGCTTGGCGGGCCTCTTTTTCCTC +
Preference number: 3 (lower is better)
Translates to: PWEEPSESEGAA*WSGCLAGLFFL
Trigger: GAGGAAAAAGAGGCCCGCCAAGCAGCCACTCCAGCAGGCGGCGCCCTCGGACTCGGACGGCTCCTCCCACGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
3UTR CCA 72 bp GTCCTGGGCTCGGGGTGTGTCCCCTGGCAGGACCCATaGGAGCTGATGCCGTGGGAGGAGCCGTCCGAGTCC +
Preference number: 3 (lower is better)
Translates to: VLGSGCVPWQDP*ELMPWEEPSES
Trigger: GGACTCGGACGGCTCCTCCCACGGCATCAGCTCCCATGGGTCCTGCCAGGGGACACACCCCGAGCCCAGGAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
3UTR CCA 72 bp GGAGCCGTCCGAGTCCGAGGGCGCCGCCTGCTGGAGTaGCTGCTTGGCGGGCCTCTTTTTCCTCCTGGGCTT +
Preference number: 3 (lower is better)
Translates to: GAVRVRGRRLLE*LLGGPLFPPGL
Trigger: AAGCCCAGGAGGAAAAAGAGGCCCGCCAAGCAGCCACTCCAGCAGGCGGCGCCCTCGGACTCGGACGGCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
3UTR CCA 72 bp TGGGAGGAGCCGTCCGAGTCCGAGGGCGCCGCCTGCTaGAGTGGCTGCTTGGCGGGCCTCTTTTTCCTCCTG +
Preference number: 3 (lower is better)
Translates to: WEEPSESEGAAC*SGCLAGLFFLL
Trigger: CAGGAGGAAAAAGAGGCCCGCCAAGCAGCCACTCCAGCAGGCGGCGCCCTCGGACTCGGACGGCTCCTCCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
3UTR-3UTR CAA 90 bp GACCCATGGGAGCTGATGCCGTGGGAGGAGCCGTCCGAGTCCGAGGGCGCCGCCTGGGCTTCTCTCGTCTaGGCTCTCTGGAATCCTGCG +
Preference number: 3 (lower is better)
Translates to: DPWELMPWEEPSESEGAAWASLV*ALWNPA
Trigger: CGCAGGATTCCAGAGAGCCAAGACGAGAGAAGCCCA...GGCGGCGCCCTCGGACTCGGACGGCTCCTCCCACGGCATCAGCTCCCATGGGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
3UTR CCA 72 bp CCGAGTCCGAGGGCGCCGCCTGCTGGAGTGGCTGCTTaGCGGGCCTCTTTTTCCTCCTGGGCTTCTCTCGTC +
Preference number: 3 (lower is better)
Translates to: PSPRAPPAGVAA*RASFSSWASLV
Trigger: GACGAGAGAAGCCCAGGAGGAAAAAGAGGCCCGCCAAGCAGCCACTCCAGCAGGCGGCGCCCTCGGACTCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
3UTR CCA 72 bp AGGGCTGCTCGAGGTGGAGGTGTGGCAATGATGGCGTaGCTGCTGAGTCCTAGACGCCCGGCCGCGGGGAAG +
Preference number: 3 (lower is better)
Translates to: RAARGGGVAMMA*LLSPRRPAAGK
Trigger: CTTCCCCGCGGCCGGGCGTCTAGGACTCAGCAGCCACGCCATCATTGCCACACCTCCACCTCGAGCAGCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
3UTR CCA 72 bp GGGACGCTCCTCAGCCCTTTGCTGCTGTGGGTGGCTTaGAGAGTACAGGGCAGGGCTGCTCGAGGTGGAGGT +
Preference number: 3 (lower is better)
Translates to: GTLLSPLLLWVA*RVQGRAARGGG
Trigger: ACCTCCACCTCGAGCAGCCCTGCCCTGTACTCTCCAAGCCACCCACAGCAGCAAAGGGCTGAGGAGCGTCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000489630.5
ENST00000495571.5
3UTR-3UTR CAA 90 bp CCGTGGGAGGAGCCGTCCGAGTCCGAGGGCGCCGCCTGCTGGAGTGGCTGCTTGGCAGGCTGGTTTTGGTaGATTCTGCGTGAAGGACTT +
Preference number: 3 (lower is better)
Translates to: PWEEPSESEGAACWSGCLAGWFW*ILREGL
Trigger: AAGTCCTTCACGCAGAATCAACCAAAACCAGCCTGC...CAAGCAGCCACTCCAGCAGGCGGCGCCCTCGGACTCGGACGGCTCCTCCCACGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
3UTR CCA 72 bp TCTCAGGGACGCTCCTCAGCCCTTTGCTGCTGTGGGTaGCTTGGAGAGTACAGGGCAGGGCTGCTCGAGGTG +
Preference number: 3 (lower is better)
Translates to: SQGRSSALCCCG*LGEYRAGLLEV
Trigger: CACCTCGAGCAGCCCTGCCCTGTACTCTCCAAGCCACCCACAGCAGCAAAGGGCTGAGGAGCGTCCCTGAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000489630.5
ENST00000495571.5
3UTR-3UTR CAA 90 bp GCGGAGGGCGGCCTTACCTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGCTCCCGGGGCCTTGTTaGCATAATTCTTCTTGGCAG +
Preference number: 3 (lower is better)
Translates to: AEGGLTSAEGPVSVSTLRLPGPC*HNSSWQ
Trigger: CTGCCAAGAAGAATTATGCAAACAAGGCCCCGGGAG...CCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGGTAAGGCCGCCCTCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000489630.5
3UTR-3UTR CAA 90 bp ATAGTCTTGTCTCTCCCGGCTTCCAGCAGAGCATCCAGGCGGCCAGCCTCGCTCGCTCCTGGAGAACCATaGTTAGAGCCTCTCGGCACA +
Preference number: 3 (lower is better)
Translates to: IVLSLPASSRASRRPASLAPGEP*LEPLGT
Trigger: TGTGCCGAGAGGCTCTAACAATGGTTCTCCAGGAGC...GAGCGAGGCTGGCCGCCTGGATGCTCTGCTGGAAGCCGGGAGAGACAAGACTAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432242.5
3UTR TCA 72 bp CAGACTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTaGGGTCTGAACAGCCTGGAAGGACGCTGGTCTCTT +
Preference number: 3 (lower is better)
Translates to: QTPRRGQFQCQR*GLNSLEGRWSL
Trigger: AAGAGACCAGCGTCCTTCCAGGCTGTTCAGACCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495571.5
ENST00000614454.1
3UTR-3UTR CAA 90 bp GCGGAGGGCGGCCTTACCTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGAAGATGCTCATTTCTTaGTCACTTAGAGCAGTCCTC +
Preference number: 3 (lower is better)
Translates to: AEGGLTSAEGPVSVSTLRKMLIS*SLRAVL
Trigger: GAGGACTGCTCTAAGTGACAAAGAAATGAGCATCTT...CCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGGTAAGGCCGCCCTCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000489630.5
3UTR-3UTR CAA 90 bp GAGGGCGGCCTTACCTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCTATTTTGCAGGTCAGGTaGGGACCTCTGAGAACAGAA +
Preference number: 3 (lower is better)
Translates to: EGGLTSAEGPVSVSTLRSILQVR*GPLRTE
Trigger: TTCTGTTCTCAGAGGTCCCAACCTGACCTGCAAAAT...AGACCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGGTAAGGCCGCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432242.5
3UTR TCA 72 bp GGGAACATAGGTGGAGCTGTGCGGGACTGCTGCCACTaGCAAGGCATCCATGAGGGTGAGTTTCTTGGCGAC +
Preference number: 3 (lower is better)
Translates to: GNIGGAVRDCCH*QGIHEGEFLGD
Trigger: GTCGCCAAGAAACTCACCCTCATGGATGCCTTGTCAGTGGCAGCAGTCCCGCACAGCTCCACCTATGTTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
ENST00000489630.5
ENST00000495571.5
3UTR TCA 72 bp TTACCTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTaGGGTCTGAACAGCCTGGAAGGACGCTGGTCTCTT +
Preference number: 3 (lower is better)
Translates to: LPPRRGQFQCQR*GLNSLEGRWSL
Trigger: AAGAGACCAGCGTCCTTCCAGGCTGTTCAGACCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
3UTR GCA 72 bp CACGACCTTGGTGTCTCCGTAACTGAAGCCCACCAGTaGTTGGGTGCGGCTCACACACTTCTTCACAACCCC +
Preference number: 3 (lower is better)
Translates to: HDLGVSVTEAHQ*LGAAHTLLHNP
Trigger: GGGGTTGTGAAGAAGTGTGTGAGCCGCACCCAAGCACTGGTGGGCTTCAGTTACGGAGACACCAAGGTCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
3UTR CCA 72 bp GGCGGGCCTCTTTTTCCTCCTGGGCTTCTCTCGTCTTaGCTCTCTGGAATCCTGCGTGTCCGCTTCTTTCAG +
Preference number: 3 (lower is better)
Translates to: GGPLFPPGLLSS*LSGILRVRFFQ
Trigger: CTGAAAGAAGCGGACACGCAGGATTCCAGAGAGCCAAGACGAGAGAAGCCCAGGAGGAAAAAGAGGCCCGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
3UTR-3UTR CAA 90 bp CTCTGGATCTGGGCCAGCGTGCTGCAGGCTTCCTCCATCTCTTGCCAAACGAGAAAAATCTGCCGGCTCTaGCTGGTGAGCCAGTCCATT +
Preference number: 3 (lower is better)
Translates to: LWIWASVLQASSISCQTRKICRL*LVSQSI
Trigger: AATGGACTGGCTCACCAGCAAGAGCCGGCAGATTTT...TCTCGTTTGGCAAGAGATGGAGGAAGCCTGCAGCACGCTGGCCCAGATCCAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432242.5
3UTR GCA 72 bp ATCTGGGCCAGCGTGCTGCAGGCTTCCTCCATCTCTTaGCAAACGAGAAACACGTCCTCTCTGACTCCAGCT +
Preference number: 3 (lower is better)
Translates to: IWASVLQASSIS*QTRNTSSLTPA
Trigger: AGCTGGAGTCAGAGAGGACGTGTTTCTCGTTTGGCAAGAGATGGAGGAAGCCTGCAGCACGCTGGCCCAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422503.6
ENST00000432242.5
3UTR CCA 72 bp TGGCTCTCTGGAATCCTGCGTGTCCGCTTCTTTCAGTaGCCAGAAGAGGAAAGCAGAGTTCCTCGCCTCCAC +
Preference number: 3 (lower is better)
Translates to: WLSGILRVRFFQ*PEEESRVPRLH
Trigger: GTGGAGGCGAGGAACTCTGCTTTCCTCTTCTGGCCACTGAAAGAAGCGGACACGCAGGATTCCAGAGAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
3UTR GCA 72 bp CTCCTGGGCTTCTCTCGTCTTGGCTCTCTGGAATCCTaGGTGTCCGCTTCTTTCAGTGGCCAGAAGAGGAAA +
Preference number: 3 (lower is better)
Translates to: LLGFSRLGSLES*VSASFSGQKRK
Trigger: TTTCCTCTTCTGGCCACTGAAAGAAGCGGACACGCAGGATTCCAGAGAGCCAAGACGAGAGAAGCCCAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
3UTR CCA 72 bp CTTTGTCACTTAGAGCAGTCCTCCGGCTGCTGGCATTaGAGAGGCCATCCTTCCTTTCACTGCAAGCTGAGC +
Preference number: 3 (lower is better)
Translates to: LCHLEQSSGCWH*RGHPSFHCKLS
Trigger: GCTCAGCTTGCAGTGAAAGGAAGGATGGCCTCTCCAATGCCAGCAGCCGGAGGACTGCTCTAAGTGACAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
ENST00000489630.5
ENST00000495571.5
3UTR CCA 72 bp TCTCCGCACTGGTCTGCACGGACTCATTCTCCGGTTTaGCTTTTATATCCACAACCCCATCAGCGTGGCGGA +
Preference number: 3 (lower is better)
Translates to: SPHWSARTHSPV*LLYPQPHQRGG
Trigger: TCCGCCACGCTGATGGGGTTGTGGATATAAAAGCCAAACCGGAGAATGAGTCCGTGCAGACCAGTGCGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422503.6
3UTR CCA 72 bp GTTGCTCTCCCGGGGCCTTGTTTGCATAATTCTTCTTaGCAGCCTCCTGGAGTTCCATGGCCTGCTGGATGT +
Preference number: 3 (lower is better)
Translates to: VALPGPCLHNSS*QPPGVPWPAGC
Trigger: ACATCCAGCAGGCCATGGAACTCCAGGAGGCTGCCAAGAAGAATTATGCAAACAAGGCCCCGGGAGAGCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
3UTR-3UTR CAA 90 bp GAGGGCGGCCTTACCTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCTTTTCATAGGATTGAATaGCCTGTTCCACTTTTCGCT +
Preference number: 3 (lower is better)
Translates to: EGGLTSAEGPVSVSTLRSFHRIE*PVPLFA
Trigger: AGCGAAAAGTGGAACAGGCAATTCAATCCTATGAAA...AGACCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGGTAAGGCCGCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000489630.5
3UTR GCA 72 bp ATGGTGACGCACTGTTCCAAGATGACACCAAAAATCTaGCGGCTCTTGCTGGTGAGCCAGTCCATTCGCTGC +
Preference number: 3 (lower is better)
Translates to: MVTHCSKMTPKI*RLLLVSQSIRC
Trigger: GCAGCGAATGGACTGGCTCACCAGCAAGAGCCGGCAGATTTTTGGTGTCATCTTGGAACAGTGCGTCACCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432242.5
3UTR GCA 72 bp AACAGCCTGGAAGGACGCTGGTCTCTTAAACATAGCTaGCACCAGACGGCCTTAAAGTGTCTCAGGGACGCT +
Preference number: 3 (lower is better)
Translates to: NSLEGRWSLKHS*HQTALKCLRDA
Trigger: AGCGTCCCTGAGACACTTTAAGGCCGTCTGGTGGCAGCTATGTTTAAGAGACCAGCGTCCTTCCAGGCTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000489630.5
ENST00000495571.5
3UTR CCA 72 bp AATCCGCACTGGTCTGCACGGACTCATTCTCCGGTTTaGCTTTTATATCCACAACCCCATCAGCGTGGCGGA +
Preference number: 3 (lower is better)
Translates to: NPHWSARTHSPV*LLYPQPHQRGG
Trigger: TCCGCCACGCTGATGGGGTTGTGGATATAAAAGCCAAACCGGAGAATGAGTCCGTGCAGACCAGTGCGGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
3UTR CCA 72 bp CTTTCACTGCAAGCTGAGCTCCTGAGGGAGGACATCTaGCTTCTGAGCAGGCTGGTTTTGGTTGATTCTGCG +
Preference number: 3 (lower is better)
Translates to: LSLQAELLREDI*LLSRLVLVDSA
Trigger: CGCAGAATCAACCAAAACCAGCCTGCTCAGAAGCCAGATGTCCTCCCTCAGGAGCTCAGCTTGCAGTGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
ENST00000489630.5
ENST00000495571.5
3UTR CCA 72 bp ACGGGATCTCCAAGGCCCTCTGGAGGAGAAGCTCCTTaGATTCTTCAGGAACATCCCCCACCACAAAGTAGT +
Preference number: 3 (lower is better)
Translates to: TGSPRPSGGEAP*ILQEHPPPQSS
Trigger: ACTACTTTGTGGTGGGGGATGTTCCTGAAGAATCCAAGGAGCTTCTCCTCCAGAGGGCCTTGGAGATCCCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422503.6
ENST00000432242.5
3UTR-3UTR CAA 90 bp GACCTTAGACACGACATGCTTGTCCAGGACGGGAACATAGGTGGAGCTGTGCGGCCATCCTTTTCTGCATaGTACCACCAGTCCATGATC +
Preference number: 3 (lower is better)
Translates to: DLRHDMLVQDGNIGGAVRPSFSA*YHQSMI
Trigger: GATCATGGACTGGTGGTACAATGCAGAAAAGGATGG...CCGCACAGCTCCACCTATGTTCCCGTCCTGGACAAGCATGTCGTGTCTAAGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
ENST00000495571.5
3UTR-3UTR CAA 90 bp CTTCTCTCGTCTTGGCTCTCTGGAATCCTGCGTGTCCGCTTCTTTCAGTGGCCAATGGATTCAATAGTCTaGTCTCTCCCGGCTTCCAGC +
Preference number: 3 (lower is better)
Translates to: LLSSWLSGILRVRFFQWPMDSIV*SLPASS
Trigger: GCTGGAAGCCGGGAGAGACAAGACTATTGAATCCAT...TGGCCACTGAAAGAAGCGGACACGCAGGATTCCAGAGAGCCAAGACGAGAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432242.5
3UTR-3UTR CAA 90 bp CTCTGGATCTGGGCCAGCGTGCTGCAGGCTTCCTCCATCTCTTGCCAAACGAGACCACTTCACAGGCTCTaGAGAAACCCGTATGATATT +
Preference number: 3 (lower is better)
Translates to: LWIWASVLQASSISCQTRPLHRL*RNPYDI
Trigger: AATATCATACGGGTTTCTCAAGAGCCTGTGAAGTGG...TCTCGTTTGGCAAGAGATGGAGGAAGCCTGCAGCACGCTGGCCCAGATCCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432242.5
3UTR-3UTR CAA 90 bp CCCCACAGGCGTGATGAAGGAGGTGGACACGACCTTGGTGTCTCCGTAACTGAAATCTTATTTGTGTCGTaGCACACATGTGCCAGAGGG +
Preference number: 3 (lower is better)
Translates to: PHRRDEGGGHDLGVSVTEILFVS*HTCARG
Trigger: CCCTCTGGCACATGTGTGCAACGACACAAATAAGAT...TTCAGTTACGGAGACACCAAGGTCGTGTCCACCTCCTTCATCACGCCTGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
3UTR TCA 72 bp ATGAAGGAAACAGCTCCAGAGCGAGAGACTTGGGCTTaGAGCTCATCCAGCACTGCCCATCTGAATGGCCTA +
Preference number: 3 (lower is better)
Translates to: MKETAPERETWA*SSSSTAHLNGL
Trigger: TAGGCCATTCAGATGGGCAGTGCTGGATGAGCTTCAAGCCCAAGTCTCTCGCTCTGGAGCTGTTTCCTTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000422503.6
ENST00000432242.5
ENST00000433678.5
ENST00000495571.5
3UTR GCA 72 bp TGCTCATTTCTTTGTCACTTAGAGCAGTCCTCCGGCTaGTGGCATTGGAGAGGCCATCCTTCCTTTCACTGC +
Preference number: 3 (lower is better)
Translates to: CSFLCHLEQSSG*WHWRGHPSFHC
Trigger: GCAGTGAAAGGAAGGATGGCCTCTCCAATGCCAGCAGCCGGAGGACTGCTCTAAGTGACAAAGAAATGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
ENST00000489630.5
ENST00000495571.5
3UTR-3UTR CAA 90 bp TCAACAGAGGTTGTTTCTGACTCGCAGTCCACAGTGGCCACGTCGGGCTTGGGAGACTCATTCTCCGGTTaGGCTTTTATATCCACAACC +
Preference number: 3 (lower is better)
Translates to: STEVVSDSQSTVATSGLGDSFSG*AFISTT
Trigger: GGTTGTGGATATAAAAGCCAAACCGGAGAATGAGTC...TCCCAAGCCCGACGTGGCCACTGTGGACTGCGAGTCAGAAACAACCTCTGTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422503.6
ENST00000432242.5
3UTR-3UTR CAA 90 bp TTGGCTTTTATATCCACAACCCCATCAGCGTGGCGGAAAGAGCAGTCGGCAAGCTGGAGGAGAAGCTCCTaGGATTCTTCAGGAACATCC +
Preference number: 3 (lower is better)
Translates to: LAFISTTPSAWRKEQSASWRRSS*DSSGTS
Trigger: GGATGTTCCTGAAGAATCCAAGGAGCTTCTCCTCCA...GCTTGCCGACTGCTCTTTCCGCCACGCTGATGGGGTTGTGGATATAAAAGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422503.6
ENST00000432242.5
3UTR-3UTR CAA 90 bp CTTCTCTCGTCTTGGCTCTCTGGAATCCTGCGTGTCCGCTTCTTTCAGTGGCCAGTGGCCACATGCTTATaGGGAAGTGCTATGACAATG +
Preference number: 3 (lower is better)
Translates to: LLSSWLSGILRVRFFQWPVATCL*GSAMTM
Trigger: CATTGTCATAGCACTTCCCAATAAGCATGTGGCCAC...TGGCCACTGAAAGAAGCGGACACGCAGGATTCCAGAGAGCCAAGACGAGAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
3UTR-3UTR CAA 90 bp GACCTTAGACACGACATGCTTGTCCAGGACGGGAACATAGGTGGAGCTGTGCGGCTCAGAATAAAGGTCTaGCATCTTCTCCAGATCACT +
Preference number: 3 (lower is better)
Translates to: DLRHDMLVQDGNIGGAVRLRIKV*HLLQIT
Trigger: AGTGATCTGGAGAAGATGCAAGACCTTTATTCTGAG...CCGCACAGCTCCACCTATGTTCCCGTCCTGGACAAGCATGTCGTGTCTAAGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
ENST00000495571.5
3UTR-3UTR CAA 90 bp CTCTGGAATCCTGCGTGTCCGCTTCTTTCAGTGGCCAGAAGAGGAAAGCAGAGTACCTTTTCTGACGATTaGTCATCCAGCCACTCCTCA +
Preference number: 3 (lower is better)
Translates to: LWNPACPLLSVARRGKQSTFSDD*SSSHSS
Trigger: TGAGGAGTGGCTGGATGACAAATCGTCAGAAAAGGT...ACTCTGCTTTCCTCTTCTGGCCACTGAAAGAAGCGGACACGCAGGATTCCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
3UTR-3UTR CAA 90 bp TGGCCAGAAGAGGAAAGCAGAGTTCCTCGCCTCCACATCCTCTACTTCTGGATCACCTTTTCTGACGATTaGTCATCCAGCCACTCCTCA +
Preference number: 3 (lower is better)
Translates to: WPEEESRVPRLHILYFWITFSDD*SSSHSS
Trigger: TGAGGAGTGGCTGGATGACAAATCGTCAGAAAAGGT...GATCCAGAAGTAGAGGATGTGGAGGCGAGGAACTCTGCTTTCCTCTTCTGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
3UTR-3UTR CAA 90 bp TCTTTGGTAATGTTGACGTGGACCAAGCTCCCATCCTTCCAGGGAGCATGGACATGGAGGAGAAGCTCCTaGGATTCTTCAGGAACATCC +
Preference number: 3 (lower is better)
Translates to: SLVMLTWTKLPSFQGAWTWRRSS*DSSGTS
Trigger: GGATGTTCCTGAAGAATCCAAGGAGCTTCTCCTCCA...TGTCCATGCTCCCTGGAAGGATGGGAGCTTGGTCCACGTCAACATTACCAAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422503.6
3UTR-3UTR CAA 90 bp TCTTCTTGTTCGTCTCCGCACTGGTCTGCACGGACTCATTCTCCGGTTTGGCTTAATCTGCTGTGGGTCTaGGCACTCAGATCCTTTAGA +
Preference number: 3 (lower is better)
Translates to: SSCSSPHWSARTHSPVWLNLLWV*ALRSFR
Trigger: TCTAAAGGATCTGAGTGCCAAGACCCACAGCAGATT...AAGCCAAACCGGAGAATGAGTCCGTGCAGACCAGTGCGGAGACGAACAAGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422503.6
3UTR CCA 72 bp TCCGGTTTGGCTTTTATATCCACAACCCCATCAGCGTaGCGGAAAGAGCAGTCGGCAAGCACATCATACAAG +
Preference number: 3 (lower is better)
Translates to: SGLAFISTTPSA*RKEQSASTSYK
Trigger: CTTGTATGATGTGCTTGCCGACTGCTCTTTCCGCCACGCTGATGGGGTTGTGGATATAAAAGCCAAACCGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000422503.6
ENST00000432242.5
ENST00000448638.5
3UTR CCA 72 bp TCATTTCTTTGTCACTTAGAGCAGTCCTCCGGCTGCTaGCATTGGAGAGGCCATCCTTCCTTTCACTGCAAG +
Preference number: 3 (lower is better)
Translates to: SFLCHLEQSSGC*HWRGHPSFHCK
Trigger: CTTGCAGTGAAAGGAAGGATGGCCTCTCCAATGCCAGCAGCCGGAGGACTGCTCTAAGTGACAAAGAAATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
ENST00000489630.5
ENST00000495571.5
3UTR CCA 72 bp CTGTACCACTTGCACTTCTCTTTGGTAATGTTGACGTaGACCAAGCTCCCATCCTTCCAGGGAGCATGGACA +
Preference number: 3 (lower is better)
Translates to: LYHLHFSLVMLT*TKLPSFQGAWT
Trigger: TGTCCATGCTCCCTGGAAGGATGGGAGCTTGGTCCACGTCAACATTACCAAAGAGAAGTGCAAGTGGTACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422503.6
3UTR CCA 72 bp CATTTAATCCTCCTTCGGATCCGGGCCAGGGCTGTGTaGATTCTCTCACTGTACCACTTGCACTTCTCTTTG +
Preference number: 3 (lower is better)
Translates to: HLILLRIRARAV*ILSLYHLHFSL
Trigger: CAAAGAGAAGTGCAAGTGGTACAGTGAGAGAATCCACACAGCCCTGGCCCGGATCCGAAGGAGGATTAAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422503.6
3UTR-3UTR CAA 90 bp TCCTCCGGCTGCTGGCATTGGAGAGGCCATCCTTCCTTTCACTGCAAGCTGAGCTCCAAATTATCTTCATaGACTTCAGCAAGTTGTTCC +
Preference number: 3 (lower is better)
Translates to: SSGCWHWRGHPSFHCKLSSKLSS*TSASCS
Trigger: GGAACAACTTGCTGAAGTCAATGAAGATAATTTGGA...GCTCAGCTTGCAGTGAAAGGAAGGATGGCCTCTCCAATGCCAGCAGCCGGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
3UTR-3UTR CAA 90 bp TTGGCTTTTATATCCACAACCCCATCAGCGTGGCGGAAAGAGCAGTCGGCAAGCCGGTCAGAAGGTAGATaGCCTGTGTTTCTTTATCAG +
Preference number: 3 (lower is better)
Translates to: LAFISTTPSAWRKEQSASRSEGR*PVFLYQ
Trigger: CTGATAAAGAAACACAGGCAATCTACCTTCTGACCG...GCTTGCCGACTGCTCTTTCCGCCACGCTGATGGGGTTGTGGATATAAAAGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000422503.6
ENST00000432242.5
ENST00000448638.5
3UTR-3UTR CAA 90 bp AAGCCCACCAGTGCTTGGGTGCGGCTCACACACTTCTTCACAACCCCTGGAAAACTCAGAATAAAGGTCTaGCATCTTCTCCAGATCACT +
Preference number: 3 (lower is better)
Translates to: KPTSAWVRLTHFFTTPGKLRIKV*HLLQIT
Trigger: AGTGATCTGGAGAAGATGCAAGACCTTTATTCTGAG...TTTTCCAGGGGTTGTGAAGAAGTGTGTGAGCCGCACCCAAGCACTGGTGGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000495571.5
3UTR-3UTR CAA 90 bp GCTCTCCCGGGGCCTTGTTTGCATAATTCTTCTTGGCAGCCTCCTGGAGTTCCACTCAGAATAAAGGTCTaGCATCTTCTCCAGATCACT +
Preference number: 3 (lower is better)
Translates to: ALPGPCLHNSSWQPPGVPLRIKV*HLLQIT
Trigger: AGTGATCTGGAGAAGATGCAAGACCTTTATTCTGAG...TGGAACTCCAGGAGGCTGCCAAGAAGAATTATGCAAACAAGGCCCCGGGAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000495571.5
3UTR-3UTR CAA 90 bp CTTTCAGTGGCCAGAAGAGGAAAGCAGAGTTCCTCGCCTCCACATCCTCTACTTCCATCCTTTTCTGCATaGTACCACCAGTCCATGATC +
Preference number: 3 (lower is better)
Translates to: LSVARRGKQSSSPPHPLLPSFSA*YHQSMI
Trigger: GATCATGGACTGGTGGTACAATGCAGAAAAGGATGG...AAGTAGAGGATGTGGAGGCGAGGAACTCTGCTTTCCTCTTCTGGCCACTGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000495571.5
3UTR-3UTR CAA 90 bp CCACTCATGCTGTCTTCAGCTGTATGGAATGAAGGAAACAGCTCCAGAGCGAGAATGGATTCAATAGTCTaGTCTCTCCCGGCTTCCAGC +
Preference number: 3 (lower is better)
Translates to: PLMLSSAVWNEGNSSRARMDSIV*SLPASS
Trigger: GCTGGAAGCCGGGAGAGACAAGACTATTGAATCCAT...TCTCGCTCTGGAGCTGTTTCCTTCATTCCATACAGCTGAAGACAGCATGAGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422503.6
ENST00000432242.5
3UTR-3UTR CAA 90 bp CTTCTTGTTCGTCTCCGCACTGGTCTGCACGGACTCATTCTCCGGTTTGGCTTTTTCCAAGTCATCACATaGTCACCATCCTTTGTGGAG +
Preference number: 3 (lower is better)
Translates to: LLVRLRTGLHGLILRFGFFQVIT*SPSFVE
Trigger: CTCCACAAAGGATGGTGACAATGTGATGACTTGGAA...AAAGCCAAACCGGAGAATGAGTCCGTGCAGACCAGTGCGGAGACGAACAAGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422503.6
3UTR CCA 72 bp GAGCAGTCGGCAAGCACATCATACAAGGATAGCTTCTaGGCCTTCAAGCCATATTTCTGCAGCCATGTCTTA +
Preference number: 3 (lower is better)
Translates to: EQSASTSYKDSF*AFKPYFCSHVL
Trigger: TAAGACATGGCTGCAGAAATATGGCTTGAAGGCCCAGAAGCTATCCTTGTATGATGTGCTTGCCGACTGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422503.6
ENST00000432242.5
3UTR-3UTR CAA 90 bp CTGTACCACTTGCACTTCTCTTTGGTAATGTTGACGTGGACCAAGCTCCCATCCCGGTCAGAAGGTAGATaGCCTGTGTTTCTTTATCAG +
Preference number: 3 (lower is better)
Translates to: LYHLHFSLVMLTWTKLPSRSEGR*PVFLYQ
Trigger: CTGATAAAGAAACACAGGCAATCTACCTTCTGACCG...GGATGGGAGCTTGGTCCACGTCAACATTACCAAAGAGAAGTGCAAGTGGTACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422503.6
3UTR-3UTR CAA 90 bp CTGAAGACACATCTGAAGAATCGTGGTCATAAACCTGGCTTCCTTCTCGCGTCAGACTCATTCTCCGGTTaGGCTTTTATATCCACAACC +
Preference number: 3 (lower is better)
Translates to: LKTHLKNRGHKPGFLLASDSFSG*AFISTT
Trigger: GGTTGTGGATATAAAAGCCAAACCGGAGAATGAGTC...TGACGCGAGAAGGAAGCCAGGTTTATGACCACGATTCTTCAGATGTGTCTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
3UTR-3UTR CAA 90 bp TGTCATCCAGCCACTCCTCAGCCAGCAAGATGCTCATTTCTTTGTCACTTAGAGGACTCATTCTCCGGTTaGGCTTTTATATCCACAACC +
Preference number: 3 (lower is better)
Translates to: CHPATPQPARCSFLCHLEDSFSG*AFISTT
Trigger: GGTTGTGGATATAAAAGCCAAACCGGAGAATGAGTC...CTCTAAGTGACAAAGAAATGAGCATCTTGCTGGCTGAGGAGTGGCTGGATGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
3UTR-3UTR CAA 90 bp AGGCCCCATGGTCCCTTCAACATATTCAGAGATGAAGTTTGTGTTGAATCGACAGGGCACTCAGGGTGTTaGTGGAGCTTCCAATCTTTA +
Preference number: 3 (lower is better)
Translates to: RPHGPFNIFRDEVCVESTGHSGC*WSFQSL
Trigger: TAAAGATTGGAAGCTCCACAAACACCCTGAGTGCCC...TGTCGATTCAACACAAACTTCATCTCTGAATATGTTGAAGGGACCATGGGGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
3UTR-3UTR CAA 90 bp TCAAGGACTCAGAATAAAGGTCTTGCATCTTCTCCAGATCACTGTGACCCTGTTGCAGGCTGGTTTTGGTaGATTCTGCGTGAAGGACTT +
Preference number: 3 (lower is better)
Translates to: SRTQNKGLASSPDHCDPVAGWFW*ILREGL
Trigger: AAGTCCTTCACGCAGAATCAACCAAAACCAGCCTGC...AACAGGGTCACAGTGATCTGGAGAAGATGCAAGACCTTTATTCTGAGTCCTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
ENST00000495571.5
3UTR-3UTR CAA 90 bp GATCAGGTCTCCCATCGGTCAGAAGGTAGATTGCCTGTGTTTCTTTATCAGCAAAATCTGCTGTGGGTCTaGGCACTCAGATCCTTTAGA +
Preference number: 3 (lower is better)
Translates to: DQVSHRSEGRLPVFLYQQNLLWV*ALRSFR
Trigger: TCTAAAGGATCTGAGTGCCAAGACCCACAGCAGATT...TTGCTGATAAAGAAACACAGGCAATCTACCTTCTGACCGATGGGAGACCTGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422503.6
ENST00000432242.5
3UTR CCA 72 bp TTGCATAATTCTTCTTGGCAGCCTCCTGGAGTTCCATaGCCTGCTGGATGTACATTTTCCCAGCTAGGATTT +
Preference number: 3 (lower is better)
Translates to: LHNSSWQPPGVP*PAGCTFSQLGF
Trigger: AAATCCTAGCTGGGAAAATGTACATCCAGCAGGCCATGGAACTCCAGGAGGCTGCCAAGAAGAATTATGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
3UTR-3UTR CAA 90 bp AGGCCCCATGGTCCCTTCAACATATTCAGAGATGAAGTTTGTGTTGAATCGACACCGCCAAGCAACTGCTaGACCATCAAACTTCACAAA +
Preference number: 3 (lower is better)
Translates to: RPHGPFNIFRDEVCVESTPPSNC*TIKLHK
Trigger: TTTGTGAAGTTTGATGGTCAAGCAGTTGCTTGGCGG...TGTCGATTCAACACAAACTTCATCTCTGAATATGTTGAAGGGACCATGGGGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
3UTR-3UTR CAA 90 bp GATCAAGGACTCAGAATAAAGGTCTTGCATCTTCTCCAGATCACTGTGACCCTGCGGTCAGAAGGTAGATaGCCTGTGTTTCTTTATCAG +
Preference number: 3 (lower is better)
Translates to: DQGLRIKVLHLLQITVTLRSEGR*PVFLYQ
Trigger: CTGATAAAGAAACACAGGCAATCTACCTTCTGACCG...CAGGGTCACAGTGATCTGGAGAAGATGCAAGACCTTTATTCTGAGTCCTTGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
3UTR-3UTR CAA 90 bp TCAAGGACTCAGAATAAAGGTCTTGCATCTTCTCCAGATCACTGTGACCCTGTTACCTTTTCTGACGATTaGTCATCCAGCCACTCCTCA +
Preference number: 3 (lower is better)
Translates to: SRTQNKGLASSPDHCDPVTFSDD*SSSHSS
Trigger: TGAGGAGTGGCTGGATGACAAATCGTCAGAAAAGGT...AACAGGGTCACAGTGATCTGGAGAAGATGCAAGACCTTTATTCTGAGTCCTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
ENST00000495571.5
3UTR-3UTR CAA 90 bp GAGAATGTAGATGCAATCATTATGCAATCTTCCAAAGAGGCTTTGACTCCCATCGGCTTCCTCCATCTCTaGCCAAACGAGAAACACGTC +
Preference number: 3 (lower is better)
Translates to: ENVDAIIMQSSKEALTPIGFLHL*PNEKHV
Trigger: GACGTGTTTCTCGTTTGGCAAGAGATGGAGGAAGCC...GATGGGAGTCAAAGCCTCTTTGGAAGATTGCATAATGATTGCATCTACATTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422503.6
ENST00000432242.5
3UTR TCA 72 bp CACATCCTCTACTTCTGGATCCTCAGGAATTGGGGGTaGCTTTATATGAGAGCAAGAGAGCGCATACTTGTT +
Preference number: 3 (lower is better)
Translates to: HILYFWILRNWG*LYMRARERILV
Trigger: AACAAGTATGCGCTCTCTTGCTCTCATATAAAGTCACCCCCAATTCCTGAGGATCCAGAAGTAGAGGATGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
3UTR-3UTR CAA 90 bp ACACATCTGAAGAATCGTGGTCATAAACCTGGCTTCCTTCTCGCGTCACCTTTTAAGATGCTCATTTCTTaGTCACTTAGAGCAGTCCTC +
Preference number: 3 (lower is better)
Translates to: THLKNRGHKPGFLLASPFKMLIS*SLRAVL
Trigger: GAGGACTGCTCTAAGTGACAAAGAAATGAGCATCTT...AAAAGGTGACGCGAGAAGGAAGCCAGGTTTATGACCACGATTCTTCAGATGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
ENST00000489630.5
ENST00000495571.5
3UTR GCA 72 bp CCAAGTCATCACATTGTCACCATCCTTTGTGGAGAATaGAGGAAATTCTACACACTCTGTTCTCTCGGCAAA +
Preference number: 3 (lower is better)
Translates to: PSHHIVTILCGE*RKFYTLCSLGK
Trigger: TTTGCCGAGAGAACAGAGTGTGTAGAATTTCCTGCATTCTCCACAAAGGATGGTGACAATGTGATGACTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422503.6
ENST00000432242.5
3UTR GCA 72 bp AGAGAGCGCATACTTGTTTTGGCTGATCTTAATAAGTaGACTCCGAGGGCAAAATTCTCTCCGGTTGTTACA +
Preference number: 3 (lower is better)
Translates to: RERILVLADLNK*TPRAKFSPVVT
Trigger: TGTAACAACCGGAGAGAATTTTGCCCTCGGAGTGCACTTATTAAGATCAGCCAAAACAAGTATGCGCTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
3UTR-3UTR CAA 90 bp AATGGAACTCTCCTCCAGTCAAAGCAGCAACCTCTTTCAAAAACCTGTTTGCAAGACTCATTCTCCGGTTaGGCTTTTATATCCACAACC +
Preference number: 3 (lower is better)
Translates to: NGTLLQSKQQPLSKTCLQDSFSG*AFISTT
Trigger: GGTTGTGGATATAAAAGCCAAACCGGAGAATGAGTC...TTGCAAACAGGTTTTTGAAAGAGGTTGCTGCTTTGACTGGAGGAGAGTTCCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
3UTR-3UTR CAA 90 bp TCCTGGAGTTCCATGGCCTGCTGGATGTACATTTTCCCAGCTAGGATTTCACTTTTCCTTTCAGTTTCCTaGAATTCCAAGTCATCACAT +
Preference number: 3 (lower is better)
Translates to: SWSSMACWMYIFPARISLFLSVS*NSKSSH
Trigger: ATGTGATGACTTGGAATTCAAGGAAACTGAAAGGAA...AAGTGAAATCCTAGCTGGGAAAATGTACATCCAGCAGGCCATGGAACTCCAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432242.5
3UTR TCA 72 bp GATCTTGTCCTTCACCAAGTCCAGTTTGCTCTTCATTaGGTGAGACGTGTCAATGAGAATGTAGATGCAATC +
Preference number: 3 (lower is better)
Translates to: DLVLHQVQFALH*VRRVNENVDAI
Trigger: GATTGCATCTACATTCTCATTGACACGTCTCACTCAATGAAGAGCAAACTGGACTTGGTGAAGGACAAGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000422503.6
ENST00000432242.5
ENST00000448638.5
3UTR TCA 72 bp TGTCTCCATCCTTTTCTGCATTGTACCACCAGTCCATaGTCAAGGACTCAGAATAAAGGTCTTGCATCTTCT +
Preference number: 3 (lower is better)
Translates to: CLHPFLHCTTSP*SRTQNKGLASS
Trigger: AGAAGATGCAAGACCTTTATTCTGAGTCCTTGATCATGGACTGGTGGTACAATGCAGAAAAGGATGGAGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000433678.5
ENST00000448638.5
ENST00000495571.5
3UTR-3UTR CAA 90 bp TATTTCTGCAGCCATGTCTTAGAGTCCCAGGTGTCTTCTGGATTCGATGCAATCTCCAAATTATCTTCATaGACTTCAGCAAGTTGTTCC +
Preference number: 3 (lower is better)
Translates to: YFCSHVLESQVSSGFDAISKLSS*TSASCS
Trigger: GGAACAACTTGCTGAAGTCAATGAAGATAATTTGGA...GATTGCATCGAATCCAGAAGACACCTGGGACTCTAAGACATGGCTGCAGAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422503.6
ENST00000432242.5
3UTR-3UTR CAA 90 bp TCAAGGACTCAGAATAAAGGTCTTGCATCTTCTCCAGATCACTGTGACCCTGTTGAGATGAAGTTTGTGTaGAATCGACATCAGATTGAG +
Preference number: 3 (lower is better)
Translates to: SRTQNKGLASSPDHCDPVEMKFV*NRHQIE
Trigger: CTCAATCTGATGTCGATTCAACACAAACTTCATCTC...AACAGGGTCACAGTGATCTGGAGAAGATGCAAGACCTTTATTCTGAGTCCTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
ENST00000495571.5
3UTR CCA 72 bp TTTCACTTTCCAGCATCGACAGCTCTTTCAGTGAAATaGGCCAATTCAACCGTTCTAAAGCCTGGTTTAAAA +
Preference number: 3 (lower is better)
Translates to: FHFPASTALSVK*ANSTVLKPGLK
Trigger: TTTTAAACCAGGCTTTAGAACGGTTGAATTGGCCCATTTCACTGAAAGAGCTGTCGATGCTGGAAAGTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
3UTR-3UTR CAA 90 bp GTGAGACGTGTCAATGAGAATGTAGATGCAATCATTATGCAATCTTCCAAAGAGCGGTCAGAAGGTAGATaGCCTGTGTTTCTTTATCAG +
Preference number: 3 (lower is better)
Translates to: VRRVNENVDAIIMQSSKERSEGR*PVFLYQ
Trigger: CTGATAAAGAAACACAGGCAATCTACCTTCTGACCG...CTCTTTGGAAGATTGCATAATGATTGCATCTACATTCTCATTGACACGTCTCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000422503.6
ENST00000432242.5
ENST00000448638.5
3UTR-3UTR CAA 90 bp ATGGAACTCTCCTCCAGTCAAAGCAGCAACCTCTTTCAAAAACCTGTTTGCAATTCCAAATTATCTTCATaGACTTCAGCAAGTTGTTCC +
Preference number: 3 (lower is better)
Translates to: MELSSSQSSNLFQKPVCNSKLSS*TSASCS
Trigger: GGAACAACTTGCTGAAGTCAATGAAGATAATTTGGA...ATTGCAAACAGGTTTTTGAAAGAGGTTGCTGCTTTGACTGGAGGAGAGTTCCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
3UTR-3UTR CAA 90 bp AATGGAACTCTCCTCCAGTCAAAGCAGCAACCTCTTTCAAAAACCTGTTTGCAAGTGATACTTGAATATTaGCTGTCTCCATCCTTTTCT +
Preference number: 3 (lower is better)
Translates to: NGTLLQSKQQPLSKTCLQVILEY*LSPSFS
Trigger: AGAAAAGGATGGAGACAGCAAATATTCAAGTATCAC...TTGCAAACAGGTTTTTGAAAGAGGTTGCTGCTTTGACTGGAGGAGAGTTCCATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433678.5
3UTR GCA 72 bp TTCATTGACTTCAGCAAGTTGTTCCCGCCAAGCAACTaGTTGACCATCAAACTTCACAAAGTTAAACTTACT +
Preference number: 3 (lower is better)
Translates to: FIDFSKLFPPSN*LTIKLHKVKLT
Trigger: AGTAAGTTTAACTTTGTGAAGTTTGATGGTCAAGCAGTTGCTTGGCGGGAACAACTTGCTGAAGTCAATGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000422503.6
ENST00000432242.5
ENST00000448638.5
3UTR CCA 72 bp TTGAATTCCAAGTCATCACATTGTCACCATCCTTTGTaGAGAATGCAGGAAATTCTACACACTCTGTTCTCT +
Preference number: 3 (lower is better)
Translates to: LNSKSSHCHHPL*RMQEILHTLFS
Trigger: AGAGAACAGAGTGTGTAGAATTTCCTGCATTCTCCACAAAGGATGGTGACAATGTGATGACTTGGAATTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422503.6
ENST00000432242.5
3UTR TCA 72 bp AGTCCAGTTTGCTCTTCATTGAGTGAGACGTGTCAATaGGAATGTAGATGCAATCATTATGCAATCTTCCAA +
Preference number: 3 (lower is better)
Translates to: SPVCSSLSETCQ*ECRCNHYAIFQ
Trigger: TTGGAAGATTGCATAATGATTGCATCTACATTCTCATTGACACGTCTCACTCAATGAAGAGCAAACTGGACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000422503.6
ENST00000432242.5
ENST00000448638.5
3UTR TCA 72 bp TTCAGAGATGAAGTTTGTGTTGAATCGACATCAGATTaGGGCTTTGCACACTTTTCTGGGGTTGAAATCATA +
Preference number: 3 (lower is better)
Translates to: FRDEVCVESTSD*GFAHFSGVEII
Trigger: TATGATTTCAACCCCAGAAAAGTGTGCAAAGCCTCAATCTGATGTCGATTCAACACAAACTTCATCTCTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
ENST00000495571.5
3UTR GCA 72 bp TCCAGTCAAAGCAGCAACCTCTTTCAAAAACCTGTTTaGAATCTCATCATTGTAATTGAAGGAGATGGTATA +
Preference number: 3 (lower is better)
Translates to: SSQSSNLFQKPV*NLIIVIEGDGI
Trigger: TATACCATCTCCTTCAATTACAATGATGAGATTGCAAACAGGTTTTTGAAAGAGGTTGCTGCTTTGACTGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000433678.5
ENST00000448638.5
ENST00000495571.5
CDS-3UTR CCA 90 bp GACAGGGCAGGCATAGGCGGCGCGGAGGGCGGCCTTACCTCCGCGGAGGGGCCAGAGGGCGCCGCCTGCTaGAGTGGCTGCTTGGCGGGC +
Preference number: 4 (lower is better)
Translates to: DRAGIGGAEGGLTSAEGPEGAAC*SGCLAG
Trigger: GCCCGCCAAGCAGCCACTCCAGCAGGCGGCGCCCTC...TGGCCCCTCCGCGGAGGTAAGGCCGCCCTCCGCGCCGCCTATGCCTGCCCTGTC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CCA 90 bp ACAGACAGGGCAGGCATAGGCGGCGCGGAGGGCGGCCTTACCTCCGCGGAGGGGCCGGCCGCGGGGAAGTaGAGGTGGGCTGTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: TDRAGIGGAEGGLTSAEGPAAGK*RWAVLG
Trigger: GCCCAGGACAGCCCACCTCCACTTCCCCGCGGCCGG...CCCCTCCGCGGAGGTAAGGCCGCCCTCCGCGCCGCCTATGCCTGCCCTGTCTGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CCA 90 bp CAGGGCAGGCATAGGCGGCGCGGAGGGCGGCCTTACCTCCGCGGAGGGGCCAGTCGCCGCCTGCTGGAGTaGCTGCTTGGCGGGCCTCTT +
Preference number: 4 (lower is better)
Translates to: QGRHRRRGGRPYLRGGASRRLLE*LLGGPL
Trigger: AAGAGGCCCGCCAAGCAGCCACTCCAGCAGGCGGCG...ACTGGCCCCTCCGCGGAGGTAAGGCCGCCCTCCGCGCCGCCTATGCCTGCCCTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CCA 90 bp CTGCTGAGTCCTAGACGCCCGGCCGCGGGGAAGTGGAGGTGGGCTGTCCTGGGCGAGGGCGCCGCCTGCTaGAGTGGCTGCTTGGCGGGC +
Preference number: 4 (lower is better)
Translates to: LLSPRRPAAGKWRWAVLGEGAAC*SGCLAG
Trigger: GCCCGCCAAGCAGCCACTCCAGCAGGCGGCGCCCTC...GCCCAGGACAGCCCACCTCCACTTCCCCGCGGCCGGGCGTCTAGGACTCAGCAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR CCA 90 bp GGCAGGCATAGGCGGCGCGGAGGGCGGCCTTACCTCCGCGGAGGGGCCAGTTTCGCGGGGAAGTGGAGGTaGGCTGTCCTGGGCTCGGGG +
Preference number: 4 (lower is better)
Translates to: GRHRRRGGRPYLRGGASFAGKWR*AVLGSG
Trigger: CCCCGAGCCCAGGACAGCCCACCTCCACTTCCCCGC...GAAACTGGCCCCTCCGCGGAGGTAAGGCCGCCCTCCGCGCCGCCTATGCCTGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CCA 90 bp TACAGACAGGGCAGGCATAGGCGGCGCGGAGGGCGGCCTTACCTCCGCGGAGGGTGGCCACGTCGGGCTTaGGAGGCTCGGCCACCAGCC +
Preference number: 4 (lower is better)
Translates to: YRQGRHRRRGGRPYLRGGWPRRA*EARPPA
Trigger: GGCTGGTGGCCGAGCCTCCCAAGCCCGACGTGGCCA...CCCTCCGCGGAGGTAAGGCCGCCCTCCGCGCCGCCTATGCCTGCCCTGTCTGTA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000477737.6
CDS-3UTR CCA 90 bp TACAGACAGGGCAGGCATAGGCGGCGCGGAGGGCGGCCTTACCTCCGCGGAGGGCGCCGCCTGCTGGAGTaGCTGCTTGGCGGGCCTCTT +
Preference number: 4 (lower is better)
Translates to: YRQGRHRRRGGRPYLRGGRRLLE*LLGGPL
Trigger: AAGAGGCCCGCCAAGCAGCCACTCCAGCAGGCGGCG...CCCTCCGCGGAGGTAAGGCCGCCCTCCGCGCCGCCTATGCCTGCCCTGTCTGTA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CCA 90 bp ACAGACAGGGCAGGCATAGGCGGCGCGGAGGGCGGCCTTACCTCCGCGGAGGGGTGGGAGCTGATGCCGTaGGAGGAGCCGTCCGAGTCC +
Preference number: 4 (lower is better)
Translates to: TDRAGIGGAEGGLTSAEGWELMP*EEPSES
Trigger: GGACTCGGACGGCTCCTCCCACGGCATCAGCTCCCA...CCCCTCCGCGGAGGTAAGGCCGCCCTCCGCGCCGCCTATGCCTGCCCTGTCTGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CCA 90 bp GACAGGGCAGGCATAGGCGGCGCGGAGGGCGGCCTTACCTCCGCGGAGGGGCCACAGTCCTCCGGCTGCTaGCATTGGAGAGGCCATCCT +
Preference number: 4 (lower is better)
Translates to: DRAGIGGAEGGLTSAEGPQSSGC*HWRGHP
Trigger: AGGATGGCCTCTCCAATGCCAGCAGCCGGAGGACTG...TGGCCCCTCCGCGGAGGTAAGGCCGCCCTCCGCGCCGCCTATGCCTGCCCTGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CCA 90 bp TACAGACAGGGCAGGCATAGGCGGCGCGGAGGGCGGCCTTACCTCCGCGGAGGGTCGGGGTGTGTCCCCTaGCAGGACCCATGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: YRQGRHRRRGGRPYLRGGSGCVP*QDPWEL
Trigger: CAGCTCCCATGGGTCCTGCCAGGGGACACACCCCGA...CCCTCCGCGGAGGTAAGGCCGCCCTCCGCGCCGCCTATGCCTGCCCTGTCTGTA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CCA 90 bp GACAGGGCAGGCATAGGCGGCGCGGAGGGCGGCCTTACCTCCGCGGAGGGGCCACTGCTGTGGGTGGCTTaGAGAGTACAGGGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: DRAGIGGAEGGLTSAEGPLLWVA*RVQGRA
Trigger: AGCCCTGCCCTGTACTCTCCAAGCCACCCACAGCAG...TGGCCCCTCCGCGGAGGTAAGGCCGCCCTCCGCGCCGCCTATGCCTGCCCTGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR TCA 90 bp GACAGGGCAGGCATAGGCGGCGCGGAGGGCGGCCTTACCTCCGCGGAGGGGCCAGAAACACGTCCTCTCTaGCTCCAGCTCCTGGAGGGA +
Preference number: 4 (lower is better)
Translates to: DRAGIGGAEGGLTSAEGPETRPL*LQLLEG
Trigger: TCCCTCCAGGAGCTGGAGTCAGAGAGGACGTGTTTC...TGGCCCCTCCGCGGAGGTAAGGCCGCCCTCCGCGCCGCCTATGCCTGCCCTGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000477737.6
CDS-3UTR TCA 90 bp GGCAGGCATAGGCGGCGCGGAGGGCGGCCTTACCTCCGCGGAGGGGCCAGTTTCCGGGACTGCTGCCACTaGCAAGGCATCCATGAGGGT +
Preference number: 4 (lower is better)
Translates to: GRHRRRGGRPYLRGGASFRDCCH*QGIHEG
Trigger: ACCCTCATGGATGCCTTGTCAGTGGCAGCAGTCCCG...GAAACTGGCCCCTCCGCGGAGGTAAGGCCGCCCTCCGCGCCGCCTATGCCTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR TCA 90 bp CAGGGCAGGCATAGGCGGCGCGGAGGGCGGCCTTACCTCCGCGGAGGGGCCAGTTGGTGTCTCCGTAACTaGAGCCCACCAGTGCTTGGG +
Preference number: 4 (lower is better)
Translates to: QGRHRRRGGRPYLRGGASWCLRN*SPPVLG
Trigger: CCCAAGCACTGGTGGGCTTCAGTTACGGAGACACCA...ACTGGCCCCTCCGCGGAGGTAAGGCCGCCCTCCGCGCCGCCTATGCCTGCCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR TCA 90 bp GACAGGGCAGGCATAGGCGGCGCGGAGGGCGGCCTTACCTCCGCGGAGGGGCCAGTCAACGCTGAGGTCTaGACAGCCTGGAAGGACGCT +
Preference number: 4 (lower is better)
Translates to: DRAGIGGAEGGLTSAEGPVNAEV*TAWKDA
Trigger: AGCGTCCTTCCAGGCTGTTCAGACCTCAGCGTTGAC...TGGCCCCTCCGCGGAGGTAAGGCCGCCCTCCGCGCCGCCTATGCCTGCCCTGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR GCA 90 bp CCGTGGGAGGAGCCGTCCGAGTCCGAGGGCGCCGCCTGCTGGAGTGGCTGCTTGGAGCAGTCCTCCGGCTaGTGGCATTGGAGAGGCCAT +
Preference number: 4 (lower is better)
Translates to: PWEEPSESEGAACWSGCLEQSSG*WHWRGH
Trigger: ATGGCCTCTCCAATGCCAGCAGCCGGAGGACTGCTC...CAAGCAGCCACTCCAGCAGGCGGCGCCCTCGGACTCGGACGGCTCCTCCCACGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR TCA 90 bp ACAGACAGGGCAGGCATAGGCGGCGCGGAGGGCGGCCTTACCTCCGCGGAGGGGGTCAACGCTGAGGTCTaGACAGCCTGGAAGGACGCT +
Preference number: 4 (lower is better)
Translates to: TDRAGIGGAEGGLTSAEGVNAEV*TAWKDA
Trigger: AGCGTCCTTCCAGGCTGTTCAGACCTCAGCGTTGAC...CCCCTCCGCGGAGGTAAGGCCGCCCTCCGCGCCGCCTATGCCTGCCCTGTCTGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR GCA 90 bp CAGGGCAGGCATAGGCGGCGCGGAGGGCGGCCTTACCTCCGCGGAGGGGCCAGTGCTCCCCCTCCAGAATaGCGCCAAAATCCAGCACTA +
Preference number: 4 (lower is better)
Translates to: QGRHRRRGGRPYLRGGASAPPPE*RQNPAL
Trigger: TAGTGCTGGATTTTGGCGGCATTCTGGAGGGGGAGC...ACTGGCCCCTCCGCGGAGGTAAGGCCGCCCTCCGCGCCGCCTATGCCTGCCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000477737.6
CDS-3UTR GCA 90 bp AGGAGTCTTTGCTACAGACAGGGCAGGCATAGGCGGCGCGGAGGGCGGCCTTACTCCGAGGGCGCCGCCTaGTGGAGTGGCTGCTTGGCG +
Preference number: 4 (lower is better)
Translates to: RSLCYRQGRHRRRGGRPYSEGAA*WSGCLA
Trigger: CGCCAAGCAGCCACTCCAGCAGGCGGCGCCCTCGGA...GTAAGGCCGCCCTCCGCGCCGCCTATGCCTGCCCTGTCTGTAGCAAAGACTCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR GCA 90 bp GGGATGGAGGGGAGAGGAGTCTTTGCTACAGACAGGGCAGGCATAGGCGGCGCGTCCGAGGGCGCCGCCTaGTGGAGTGGCTGCTTGGCG +
Preference number: 4 (lower is better)
Translates to: GMEGRGVFATDRAGIGGASEGAA*WSGCLA
Trigger: CGCCAAGCAGCCACTCCAGCAGGCGGCGCCCTCGGA...CGCGCCGCCTATGCCTGCCCTGTCTGTAGCAAAGACTCCTCTCCCCTCCATCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CCA 90 bp CAGGGCAGGCATAGGCGGCGCGGAGGGCGGCCTTACCTCCGCGGAGGGGCCAGTTCCGGCTGCTGGCATTaGAGAGGCCATCCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: QGRHRRRGGRPYLRGGASSGCWH*RGHPSF
Trigger: AAAGGAAGGATGGCCTCTCCAATGCCAGCAGCCGGA...ACTGGCCCCTCCGCGGAGGTAAGGCCGCCCTCCGCGCCGCCTATGCCTGCCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CCA 90 bp TACAGACAGGGCAGGCATAGGCGGCGCGGAGGGCGGCCTTACCTCCGCGGAGGGGGACGGGAACATAGGTaGAGCTGTGCGGGACTGCTG +
Preference number: 4 (lower is better)
Translates to: YRQGRHRRRGGRPYLRGGGREHR*SCAGLL
Trigger: CAGCAGTCCCGCACAGCTCCACCTATGTTCCCGTCC...CCCTCCGCGGAGGTAAGGCCGCCCTCCGCGCCGCCTATGCCTGCCCTGTCTGTA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CCA 90 bp GTCTTTGCTACAGACAGGGCAGGCATAGGCGGCGCGGAGGGCGGCCTTACCTCCCGCCGCCTGCTGGAGTaGCTGCTTGGCGGGCCTCTT +
Preference number: 4 (lower is better)
Translates to: VFATDRAGIGGAEGGLTSRRLLE*LLGGPL
Trigger: AAGAGGCCCGCCAAGCAGCCACTCCAGCAGGCGGCG...GGAGGTAAGGCCGCCCTCCGCGCCGCCTATGCCTGCCCTGTCTGTAGCAAAGAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CCA 90 bp GGCTTGGAGAGTACAGGGCAGGGCTGCTCGAGGTGGAGGTGTGGCAATGATGGCGAGGGCGCCGCCTGCTaGAGTGGCTGCTTGGCGGGC +
Preference number: 4 (lower is better)
Translates to: GLESTGQGCSRWRCGNDGEGAAC*SGCLAG
Trigger: GCCCGCCAAGCAGCCACTCCAGCAGGCGGCGCCCTC...GCCATCATTGCCACACCTCCACCTCGAGCAGCCCTGCCCTGTACTCTCCAAGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR CCA 90 bp GGCAGGCATAGGCGGCGCGGAGGGCGGCCTTACCTCCGCGGAGGGGCCAGTTTCGTGGCAATGATGGCGTaGCTGCTGAGTCCTAGACGC +
Preference number: 4 (lower is better)
Translates to: GRHRRRGGRPYLRGGASFVAMMA*LLSPRR
Trigger: GCGTCTAGGACTCAGCAGCCACGCCATCATTGCCAC...GAAACTGGCCCCTCCGCGGAGGTAAGGCCGCCCTCCGCGCCGCCTATGCCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CCA 90 bp ACAGACAGGGCAGGCATAGGCGGCGCGGAGGGCGGCCTTACCTCCGCGGAGGGGGTGGCAATGATGGCGTaGCTGCTGAGTCCTAGACGC +
Preference number: 4 (lower is better)
Translates to: TDRAGIGGAEGGLTSAEGVAMMA*LLSPRR
Trigger: GCGTCTAGGACTCAGCAGCCACGCCATCATTGCCAC...CCCCTCCGCGGAGGTAAGGCCGCCCTCCGCGCCGCCTATGCCTGCCCTGTCTGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CCA 90 bp GGCGCGGAGGGCGGCCTTACCTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGCCATCACCCAAACCCTaGGCTCGGGGTGTGTCCCCT +
Preference number: 4 (lower is better)
Translates to: GAEGGLTSAEGPVSVSTLPSPKP*ARGVSP
Trigger: AGGGGACACACCCCGAGCCCAGGGTTTGGGTGATGG...CAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGGTAAGGCCGCCCTCCGCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000473149.5
CDS-3UTR TCA 90 bp GGAGGGCGGCCTTACCTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCAGGACCCATGGGAGCTaGTGCCGTGGGAGGAGCCGT +
Preference number: 4 (lower is better)
Translates to: GGRPYLRGGASFSVNAEVRTHGS*CRGRSR
Trigger: ACGGCTCCTCCCACGGCATCAGCTCCCATGGGTCCT...GACCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGGTAAGGCCGCCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR GCA 90 bp GGCGCGGAGGGCGGCCTTACCTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGGGATCTGGGCCAGCGTaGTGCAGGCTTCCTCCATCT +
Preference number: 4 (lower is better)
Translates to: GAEGGLTSAEGPVSVSTLGSGPA*CRLPPS
Trigger: AGATGGAGGAAGCCTGCAGCACGCTGGCCCAGATCC...CAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGGTAAGGCCGCCCTCCGCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000477737.6
CDS-3UTR CCA 90 bp CAGGGCAGGCATAGGCGGCGCGGAGGGCGGCCTTACCTCCGCGGAGGGGCCAGTATTCTGAACAGCCTCTaGGGGAGTGGGATCCTTGCA +
Preference number: 4 (lower is better)
Translates to: QGRHRRRGGRPYLRGGASILNSL*GSGILA
Trigger: TGCAAGGATCCCACTCCCCCAGAGGCTGTTCAGAAT...ACTGGCCCCTCCGCGGAGGTAAGGCCGCCCTCCGCGCCGCCTATGCCTGCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
CDS-3UTR CCA 90 bp ACAGACAGGGCAGGCATAGGCGGCGCGGAGGGCGGCCTTACCTCCGCGGAGGGGCTCGTCTTGGCTCTCTaGAATCCTGCGTGTCCGCTT +
Preference number: 4 (lower is better)
Translates to: TDRAGIGGAEGGLTSAEGLVLAL*NPACPL
Trigger: AAGCGGACACGCAGGATTCCAGAGAGCCAAGACGAG...CCCCTCCGCGGAGGTAAGGCCGCCCTCCGCGCCGCCTATGCCTGCCCTGTCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CCA 90 bp GACTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCTGAACAGCCTGGAGAGGGCGCCGCCTGCTaGAGTGGCTGCTTGGCGGGC +
Preference number: 4 (lower is better)
Translates to: DSAEGPVSVSTLRSEQPGEGAAC*SGCLAG
Trigger: GCCCGCCAAGCAGCCACTCCAGCAGGCGGCGCCCTC...TCCAGGCTGTTCAGACCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495571.5
ENST00000614454.1
CDS-3UTR CCA 90 bp GGAGGGGAGAGGAGTCTTTGCTACAGACAGGGCAGGCATAGGCGGCGCGGAGGGTGGGAGCTGATGCCGTaGGAGGAGCCGTCCGAGTCC +
Preference number: 4 (lower is better)
Translates to: GGERSLCYRQGRHRRRGGWELMP*EEPSES
Trigger: GGACTCGGACGGCTCCTCCCACGGCATCAGCTCCCA...CCCTCCGCGCCGCCTATGCCTGCCCTGTCTGTAGCAAAGACTCCTCTCCCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CCA 90 bp GGAGGGCGGCCTTACCTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCTGGGAGCTGATGCCGTaGGAGGAGCCGTCCGAGTCC +
Preference number: 4 (lower is better)
Translates to: GGRPYLRGGASFSVNAEVWELMP*EEPSES
Trigger: GGACTCGGACGGCTCCTCCCACGGCATCAGCTCCCA...GACCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGGTAAGGCCGCCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CCA 90 bp GGAGGGGAGAGGAGTCTTTGCTACAGACAGGGCAGGCATAGGCGGCGCGGAGGGTCGGGGTGTGTCCCCTaGCAGGACCCATGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: GGERSLCYRQGRHRRRGGSGCVP*QDPWEL
Trigger: CAGCTCCCATGGGTCCTGCCAGGGGACACACCCCGA...CCCTCCGCGCCGCCTATGCCTGCCCTGTCTGTAGCAAAGACTCCTCTCCCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
3UTR CAA 72 bp TCCGAGTCCGAGGGCGCCGCCTGCTGGAGTGGCTGCTaGGCGGGCCTCTTTTTCCTCCTGGGCTTCTCTCGT +
Preference number: 4 (lower is better)
Translates to: SESEGAACWSGC*AGLFFLLGFSR
Trigger: ACGAGAGAAGCCCAGGAGGAAAAAGAGGCCCGCCAAGCAGCCACTCCAGCAGGCGGCGCCCTCGGACTCGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR TCA 90 bp ACAGACAGGGCAGGCATAGGCGGCGCGGAGGGCGGCCTTACCTCCGCGGAGGGGTTGAACTCGGTTATGTaGGCCACCTGCTCCTGGAGA +
Preference number: 4 (lower is better)
Translates to: TDRAGIGGAEGGLTSAEGLNSVM*ATCSWR
Trigger: TCTCCAGGAGCAGGTGGCTCACATAACCGAGTTCAA...CCCCTCCGCGGAGGTAAGGCCGCCCTCCGCGCCGCCTATGCCTGCCCTGTCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000477737.6
CDS-3UTR TCA 90 bp CAGGGCAGGCATAGGCGGCGCGGAGGGCGGCCTTACCTCCGCGGAGGGGCCAGTTCGCGTCACCTTTTCTaGCGATTTGTCATCCAGCCA +
Preference number: 4 (lower is better)
Translates to: QGRHRRRGGRPYLRGGASSRHLF*RFVIQP
Trigger: TGGCTGGATGACAAATCGTCAGAAAAGGTGACGCGA...ACTGGCCCCTCCGCGGAGGTAAGGCCGCCCTCCGCGCCGCCTATGCCTGCCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR TCA 90 bp CAGGGCAGGCATAGGCGGCGCGGAGGGCGGCCTTACCTCCGCGGAGGGGCCAGTTTTCAGTGTCAACGCTaGGGTCTGAACAGCCTGGAA +
Preference number: 4 (lower is better)
Translates to: QGRHRRRGGRPYLRGGASFQCQR*GLNSLE
Trigger: TTCCAGGCTGTTCAGACCTCAGCGTTGACACTGAAA...ACTGGCCCCTCCGCGGAGGTAAGGCCGCCCTCCGCGCCGCCTATGCCTGCCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CCA 90 bp GGCTTGGAGAGTACAGGGCAGGGCTGCTCGAGGTGGAGGTGTGGCAATGATGGCGTCGGGTGGAAGACGTaGCGGCTCCCGCTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: GLESTGQGCSRWRCGNDGVGWKT*RLPLSS
Trigger: GCTGCTGAGCGGGAGCCGCCACGTCTTCCACCCGAC...GCCATCATTGCCACACCTCCACCTCGAGCAGCCCTGCCCTGTACTCTCCAAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432242.5
CDS-3UTR CCA 90 bp GCGGAGGGCGGCCTTACCTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGAGGCAATATGTCGGGTaGAAGACGTGGCGGCTCCCG +
Preference number: 4 (lower is better)
Translates to: AEGGLTSAEGPVSVSTLRRQYVG*KTWRLP
Trigger: CGGGAGCCGCCACGTCTTCCACCCGACATATTGCCT...CCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGGTAAGGCCGCCCTCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000477737.6
CDS-3UTR CCA 90 bp CCGTGGGAGGAGCCGTCCGAGTCCGAGGGCGCCGCCTGCTGGAGTGGCTGCTTGCAGCCTCTGGGGGAGTaGGATCCTTGCAACCAAAAT +
Preference number: 4 (lower is better)
Translates to: PWEEPSESEGAACWSGCLQPLGE*DPCNQN
Trigger: ATTTTGGTTGCAAGGATCCCACTCCCCCAGAGGCTG...CAAGCAGCCACTCCAGCAGGCGGCGCCCTCGGACTCGGACGGCTCCTCCCACGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR CCA 90 bp AGACACGACATGCTTGTCCAGGACGGGAACATAGGTGGAGCTGTGCGGGACTGCCCGGCCGCGGGGAAGTaGAGGTGGGCTGTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: RHDMLVQDGNIGGAVRDCPAAGK*RWAVLG
Trigger: GCCCAGGACAGCCCACCTCCACTTCCCCGCGGCCGG...GCAGTCCCGCACAGCTCCACCTATGTTCCCGTCCTGGACAAGCATGTCGTGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR CCA 90 bp CTGCTGAGTCCTAGACGCCCGGCCGCGGGGAAGTGGAGGTGGGCTGTCCTGGGCAGCCCTTTGCTGCTGTaGGTGGCTTGGAGAGTACAG +
Preference number: 4 (lower is better)
Translates to: LLSPRRPAAGKWRWAVLGSPLLL*VAWRVQ
Trigger: CTGTACTCTCCAAGCCACCCACAGCAGCAAAGGGCT...GCCCAGGACAGCCCACCTCCACTTCCCCGCGGCCGGGCGTCTAGGACTCAGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
3UTR CAA 72 bp AGGGACGCTCCTCAGCCCTTTGCTGCTGTGGGTGGCTaGGAGAGTACAGGGCAGGGCTGCTCGAGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: RDAPQPFAAVGG*ESTGQGCSRWR
Trigger: CCTCCACCTCGAGCAGCCCTGCCCTGTACTCTCCAAGCCACCCACAGCAGCAAAGGGCTGAGGAGCGTCCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR TCA 90 bp CAGGGCAGGCATAGGCGGCGCGGAGGGCGGCCTTACCTCCGCGGAGGGGCCAGTTTCGCTTGTAGATATTaGGTTTGGCTCCTTGGGGGT +
Preference number: 4 (lower is better)
Translates to: QGRHRRRGGRPYLRGGASFACRY*VWLLGG
Trigger: ACCCCCAAGGAGCCAAACTCAATATCTACAAGCGAA...ACTGGCCCCTCCGCGGAGGTAAGGCCGCCCTCCGCGCCGCCTATGCCTGCCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR GCA 90 bp CCGTGGGAGGAGCCGTCCGAGTCCGAGGGCGCCGCCTGCTGGAGTGGCTGCTTGACCTTAGACACGACATaGTTGTCCAGGACGGGAACA +
Preference number: 4 (lower is better)
Translates to: PWEEPSESEGAACWSGCLTLDTT*LSRTGT
Trigger: TGTTCCCGTCCTGGACAAGCATGTCGTGTCTAAGGT...CAAGCAGCCACTCCAGCAGGCGGCGCCCTCGGACTCGGACGGCTCCTCCCACGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR GCA 90 bp TACAGACAGGGCAGGCATAGGCGGCGCGGAGGGCGGCCTTACCTCCGCGGAGGGGTCGTTGCACACATGTaGCAGAGGGAACACCTCATC +
Preference number: 4 (lower is better)
Translates to: YRQGRHRRRGGRPYLRGGVVAHM*QREHLI
Trigger: GATGAGGTGTTCCCTCTGGCACATGTGTGCAACGAC...CCCTCCGCGGAGGTAAGGCCGCCCTCCGCGCCGCCTATGCCTGCCCTGTCTGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR GCA 90 bp GGAGGGCGGCCTTACCTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCCGCTCCTCAGCCCTTTaGTGCTGTGGGTGGCTTGGA +
Preference number: 4 (lower is better)
Translates to: GGRPYLRGGASFSVNAEVRSSAL*CCGWLG
Trigger: TCCAAGCCACCCACAGCAGCAAAGGGCTGAGGAGCG...GACCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGGTAAGGCCGCCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR GCA 90 bp GGAGGGGAGAGGAGTCTTTGCTACAGACAGGGCAGGCATAGGCGGCGCGGAGGGCGCTCCTCAGCCCTTTaGTGCTGTGGGTGGCTTGGA +
Preference number: 4 (lower is better)
Translates to: GGERSLCYRQGRHRRRGGRSSAL*CCGWLG
Trigger: TCCAAGCCACCCACAGCAGCAAAGGGCTGAGGAGCG...CCCTCCGCGCCGCCTATGCCTGCCCTGTCTGTAGCAAAGACTCCTCTCCCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CCA 90 bp GAGGGCGGCCTTACCTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCTACCAGCCTCTGGATCTaGGCCAGCGTGCTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: EGGLTSAEGPVSVSTLRSTSLWI*ASVLQA
Trigger: AGCCTGCAGCACGCTGGCCCAGATCCAGAGGCTGGT...AGACCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGGTAAGGCCGCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000477737.6
CDS-3UTR CCA 90 bp CAGGGCAGGCATAGGCGGCGCGGAGGGCGGCCTTACCTCCGCGGAGGGGCCAGTTCCTTCCAGGGAGCATaGACAAACCTGCTGCAATAT +
Preference number: 4 (lower is better)
Translates to: QGRHRRRGGRPYLRGGASSFQGA*TNLLQY
Trigger: ATATTGCAGCAGGTTTGTCCATGCTCCCTGGAAGGA...ACTGGCCCCTCCGCGGAGGTAAGGCCGCCCTCCGCGCCGCCTATGCCTGCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477737.6
CDS-3UTR CCA 90 bp GCGGAGGGCGGCCTTACCTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGCGGGCCAGGGCTGTGTaGATTCTCTCACTGTACCAC +
Preference number: 4 (lower is better)
Translates to: AEGGLTSAEGPVSVSTLRRARAV*ILSLYH
Trigger: GTGGTACAGTGAGAGAATCCACACAGCCCTGGCCCG...CCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGGTAAGGCCGCCCTCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477737.6
CDS-3UTR CCA 90 bp GGAGGGCGGCCTTACCTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCGGACGGGAACATAGGTaGAGCTGTGCGGGACTGCTG +
Preference number: 4 (lower is better)
Translates to: GGRPYLRGGASFSVNAEVGREHR*SCAGLL
Trigger: CAGCAGTCCCGCACAGCTCCACCTATGTTCCCGTCC...GACCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGGTAAGGCCGCCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CCA 90 bp GCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCTGAACAGCCTGGAAGGACGCGCCGCCTGCTGGAGTaGCTGCTTGGCGGGCCTCTT +
Preference number: 4 (lower is better)
Translates to: AEGPVSVSTLRSEQPGRTRRLLE*LLGGPL
Trigger: AAGAGGCCCGCCAAGCAGCCACTCCAGCAGGCGGCG...CGTCCTTCCAGGCTGTTCAGACCTCAGCGTTGACACTGAAACTGGCCCCTCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
ENST00000495571.5
ENST00000614454.1
CDS-3UTR CCA 90 bp CCCCACAGGCGTGATGAAGGAGGTGGACACGACCTTGGTGTCTCCGTAACTGAAGAGGGCGCCGCCTGCTaGAGTGGCTGCTTGGCGGGC +
Preference number: 4 (lower is better)
Translates to: PHRRDEGGGHDLGVSVTEEGAAC*SGCLAG
Trigger: GCCCGCCAAGCAGCCACTCCAGCAGGCGGCGCCCTC...TTCAGTTACGGAGACACCAAGGTCGTGTCCACCTCCTTCATCACGCCTGTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR CCA 90 bp TCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCTGAACAGCCTGGAAGGGGAGGTGGGCTGTCCTaGGCTCGGGGTGTGTCCCCT +
Preference number: 4 (lower is better)
Translates to: SAEGPVSVSTLRSEQPGRGGGLS*ARGVSP
Trigger: AGGGGACACACCCCGAGCCCAGGACAGCCCACCTCC...CCTTCCAGGCTGTTCAGACCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000432242.5
ENST00000477737.6
ENST00000489630.5
ENST00000495571.5
ENST00000614454.1
CDS-3UTR TCA 90 bp GCGGAGGGCGGCCTTACCTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGACTGTTTCAGGTGGCTaGTCAGGTCTCCCATCGGTC +
Preference number: 4 (lower is better)
Translates to: AEGGLTSAEGPVSVSTLRTVSGG*SGLPSV
Trigger: GACCGATGGGAGACCTGATCAGCCACCTGAAACAGT...CCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGGTAAGGCCGCCCTCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR TCA 90 bp GAGGGCGGCCTTACCTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCTCGGGACTGCTGCCACTaGCAAGGCATCCATGAGGGT +
Preference number: 4 (lower is better)
Translates to: EGGLTSAEGPVSVSTLRSRDCCH*QGIHEG
Trigger: ACCCTCATGGATGCCTTGTCAGTGGCAGCAGTCCCG...AGACCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGGTAAGGCCGCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR TCA 90 bp GATGAAGGAGGTGGACACGACCTTGGTGTCTCCGTAACTGAAGCCCACCAGTGCCCGAGCGCGGTCTGTTaGCGACGGCGTCTCCGCGGT +
Preference number: 4 (lower is better)
Translates to: DEGGGHDLGVSVTEAHQCPSAVC*RRRLRG
Trigger: ACCGCGGAGACGCCGTCGTCAACAGACCGCGCTCGG...GCACTGGTGGGCTTCAGTTACGGAGACACCAAGGTCGTGTCCACCTCCTTCATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432242.5
CDS-3UTR TCA 90 bp CAGGGCAGGCATAGGCGGCGCGGAGGGCGGCCTTACCTCCGCGGAGGGGCCAGTCTCAGGAATTGGGGGTaGCTTTATATGAGAGCAAGA +
Preference number: 4 (lower is better)
Translates to: QGRHRRRGGRPYLRGGASLRNWG*LYMRAR
Trigger: TCTTGCTCTCATATAAAGTCACCCCCAATTCCTGAG...ACTGGCCCCTCCGCGGAGGTAAGGCCGCCCTCCGCGCCGCCTATGCCTGCCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR TCA 90 bp GCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCTGAACAGCCTGGAAGGACGAGGACCCATGGGAGCTaGTGCCGTGGGAGGAGCCGT +
Preference number: 4 (lower is better)
Translates to: AEGPVSVSTLRSEQPGRTRTHGS*CRGRSR
Trigger: ACGGCTCCTCCCACGGCATCAGCTCCCATGGGTCCT...CGTCCTTCCAGGCTGTTCAGACCTCAGCGTTGACACTGAAACTGGCCCCTCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
ENST00000495571.5
ENST00000614454.1
CDS-3UTR GCA 90 bp GGCAGGCATAGGCGGCGCGGAGGGCGGCCTTACCTCCGCGGAGGGGCCAGTTTCTTCCCGCCAAGCAACTaGTTGACCATCAAACTTCAC +
Preference number: 4 (lower is better)
Translates to: GRHRRRGGRPYLRGGASFFPPSN*LTIKLH
Trigger: GTGAAGTTTGATGGTCAAGCAGTTGCTTGGCGGGAA...GAAACTGGCCCCTCCGCGGAGGTAAGGCCGCCCTCCGCGCCGCCTATGCCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000477737.6
CDS-3UTR GCA 90 bp GACAGGGCAGGCATAGGCGGCGCGGAGGGCGGCCTTACCTCCGCGGAGGGGCCATCTTATTTGTGTCGTTaGACACATGTGCCAGAGGGA +
Preference number: 4 (lower is better)
Translates to: DRAGIGGAEGGLTSAEGPSYLCR*THVPEG
Trigger: TCCCTCTGGCACATGTGTGCAACGACACAAATAAGA...TGGCCCCTCCGCGGAGGTAAGGCCGCCCTCCGCGCCGCCTATGCCTGCCCTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CCA 90 bp CTCTCCCGGCTTCCAGCAGAGCATCCAGGCGGCCAGCCTCGCTCACAGTCAGCTACAACCCCATCAGCGTaGCGGAAAGAGCAGTCGGCA +
Preference number: 4 (lower is better)
Translates to: LSRLPAEHPGGQPRSQSATTPSA*RKEQSA
Trigger: TGCCGACTGCTCTTTCCGCCACGCTGATGGGGTTGT...AGCTGACTGTGAGCGAGGCTGGCCGCCTGGATGCTCTGCTGGAAGCCGGGAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422503.6
ENST00000432242.5
CDS-3UTR CCA 90 bp GGAGGGCGGCCTTACCTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCACAACCCCATCAGCGTaGCGGAAAGAGCAGTCGGCA +
Preference number: 4 (lower is better)
Translates to: GGRPYLRGGASFSVNAEVTTPSA*RKEQSA
Trigger: TGCCGACTGCTCTTTCCGCCACGCTGATGGGGTTGT...GACCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGGTAAGGCCGCCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000477737.6
CDS-3UTR CCA 90 bp GTCTTGTCTCTCCCGGCTTCCAGCAGAGCATCCAGGCGGCCAGCCTCGCTCACAGGACGGGAACATAGGTaGAGCTGTGCGGGACTGCTG +
Preference number: 4 (lower is better)
Translates to: VLSLPASSRASRRPASLTGREHR*SCAGLL
Trigger: CAGCAGTCCCGCACAGCTCCACCTATGTTCCCGTCC...TGTGAGCGAGGCTGGCCGCCTGGATGCTCTGCTGGAAGCCGGGAGAGACAAGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432242.5
CDS-3UTR CCA 90 bp GCTCGGCCACCAGCCTCTGGATCTGGGCCAGCGTGCTGCAGGCTTCCTCCATCTAAGCCCACCAGTGCTTaGGTGCGGCTCACACACTTC +
Preference number: 4 (lower is better)
Translates to: ARPPASGSGPACCRLPPSKPTSA*VRLTHF
Trigger: GAAGTGTGTGAGCCGCACCCAAGCACTGGTGGGCTT...AGATGGAGGAAGCCTGCAGCACGCTGGCCCAGATCCAGAGGCTGGTGGCCGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432242.5
CDS-3UTR CCA 90 bp GCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCTGAACAGCCTGGAAGGACGTGGGAGCTGATGCCGTaGGAGGAGCCGTCCGAGTCC +
Preference number: 4 (lower is better)
Translates to: AEGPVSVSTLRSEQPGRTWELMP*EEPSES
Trigger: GGACTCGGACGGCTCCTCCCACGGCATCAGCTCCCA...CGTCCTTCCAGGCTGTTCAGACCTCAGCGTTGACACTGAAACTGGCCCCTCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
ENST00000495571.5
ENST00000614454.1
CDS-3UTR CCA 90 bp TCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCTGAACAGCCTGGAAGGCCCTGGCAGGACCCATaGGAGCTGATGCCGTGGGAG +
Preference number: 4 (lower is better)
Translates to: SAEGPVSVSTLRSEQPGRPWQDP*ELMPWE
Trigger: CTCCCACGGCATCAGCTCCCATGGGTCCTGCCAGGG...CCTTCCAGGCTGTTCAGACCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
ENST00000495571.5
ENST00000614454.1
CDS-3UTR CCA 90 bp GACTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCTGAACAGCCTGGATCGGGGTGTGTCCCCTaGCAGGACCCATGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: DSAEGPVSVSTLRSEQPGSGCVP*QDPWEL
Trigger: CAGCTCCCATGGGTCCTGCCAGGGGACACACCCCGA...TCCAGGCTGTTCAGACCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000495571.5
ENST00000614454.1
CDS-3UTR CCA 90 bp CCTACAACAGACTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCTGAAGCGGGGAAGTGGAGGTaGGCTGTCCTGGGCTCGGGG +
Preference number: 4 (lower is better)
Translates to: PTTDSAEGPVSVSTLRSEAGKWR*AVLGSG
Trigger: CCCCGAGCCCAGGACAGCCCACCTCCACTTCCCCGC...TTCAGACCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGTCTGTTGTAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495571.5
ENST00000614454.1
CDS-3UTR CCA 90 bp GGTCTGAACAGCCTGGAAGGACGCTGGTCTCTTAAACATAGCTGCCACCAGACGCCGGCCGCGGGGAAGTaGAGGTGGGCTGTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: GLNSLEGRWSLKHSCHQTPAAGK*RWAVLG
Trigger: GCCCAGGACAGCCCACCTCCACTTCCCCGCGGCCGG...CGTCTGGTGGCAGCTATGTTTAAGAGACCAGCGTCCTTCCAGGCTGTTCAGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000432242.5
ENST00000477737.6
ENST00000489630.5
ENST00000495571.5
ENST00000614454.1
CDS-3UTR CCA 90 bp GGGATGGAGGGGAGAGGAGTCTTTGCTACAGACAGGGCAGGCATAGGCGGCGCGCTGCTGTGGGTGGCTTaGAGAGTACAGGGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: GMEGRGVFATDRAGIGGALLWVA*RVQGRA
Trigger: AGCCCTGCCCTGTACTCTCCAAGCCACCCACAGCAG...CGCGCCGCCTATGCCTGCCCTGTCTGTAGCAAAGACTCCTCTCCCCTCCATCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR TCA 90 bp GCGGAGGGCGGCCTTACCTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGCGCACTGTTCCAAGATaGCACCAAAAATCTGCCGGC +
Preference number: 4 (lower is better)
Translates to: AEGGLTSAEGPVSVSTLRRTVPR*HQKSAG
Trigger: GCCGGCAGATTTTTGGTGTCATCTTGGAACAGTGCG...CCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGGTAAGGCCGCCCTCCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000477737.6
CDS-3UTR TCA 90 bp GTCTTGTCTCTCCCGGCTTCCAGCAGAGCATCCAGGCGGCCAGCCTCGCTCACAGAAACACGTCCTCTCTaGCTCCAGCTCCTGGAGGGA +
Preference number: 4 (lower is better)
Translates to: VLSLPASSRASRRPASLTETRPL*LQLLEG
Trigger: TCCCTCCAGGAGCTGGAGTCAGAGAGGACGTGTTTC...TGTGAGCGAGGCTGGCCGCCTGGATGCTCTGCTGGAAGCCGGGAGAGACAAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422503.6
ENST00000432242.5
CDS-3UTR TCA 90 bp TCTTGTCTCTCCCGGCTTCCAGCAGAGCATCCAGGCGGCCAGCCTCGCTCACAGTGGTGTCTCCGTAACTaGAGCCCACCAGTGCTTGGG +
Preference number: 4 (lower is better)
Translates to: SCLSRLPAEHPGGQPRSQWCLRN*SPPVLG
Trigger: CCCAAGCACTGGTGGGCTTCAGTTACGGAGACACCA...CTGTGAGCGAGGCTGGCCGCCTGGATGCTCTGCTGGAAGCCGGGAGAGACAAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432242.5
CDS-3UTR TCA 90 bp ACAGACAGGGCAGGCATAGGCGGCGCGGAGGGCGGCCTTACCTCCGCGGAGGGGCTCAGGAATTGGGGGTaGCTTTATATGAGAGCAAGA +
Preference number: 4 (lower is better)
Translates to: TDRAGIGGAEGGLTSAEGLRNWG*LYMRAR
Trigger: TCTTGCTCTCATATAAAGTCACCCCCAATTCCTGAG...CCCCTCCGCGGAGGTAAGGCCGCCCTCCGCGCCGCCTATGCCTGCCCTGTCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR TCA 90 bp CTTACCTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCTGAACAGCCTAGGACCCATGGGAGCTaGTGCCGTGGGAGGAGCCGT +
Preference number: 4 (lower is better)
Translates to: LTSAEGPVSVSTLRSEQPRTHGS*CRGRSR
Trigger: ACGGCTCCTCCCACGGCATCAGCTCCCATGGGTCCT...AGGCTGTTCAGACCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGGTAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR GCA 90 bp GACAGGGCAGGCATAGGCGGCGCGGAGGGCGGCCTTACCTCCGCGGAGGGGCCAGATGAAATGAGACTCTaGTCAGCCAAGTCTGTTTTG +
Preference number: 4 (lower is better)
Translates to: DRAGIGGAEGGLTSAEGPDEMRL*SAKSVL
Trigger: CAAAACAGACTTGGCTGAGCAGAGTCTCATTTCATC...TGGCCCCTCCGCGGAGGTAAGGCCGCCCTCCGCGCCGCCTATGCCTGCCCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000477737.6
CDS-3UTR GCA 90 bp GGCGCGGAGGGCGGCCTTACCTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGGCTTCCTCCATCTCTTaGCAAACGAGAAACACGTCC +
Preference number: 4 (lower is better)
Translates to: GAEGGLTSAEGPVSVSTLASSIS*QTRNTS
Trigger: GGACGTGTTTCTCGTTTGGCAAGAGATGGAGGAAGC...CAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGGTAAGGCCGCCCTCCGCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000477737.6
CDS-3UTR GCA 90 bp GGCTTGGAGAGTACAGGGCAGGGCTGCTCGAGGTGGAGGTGTGGCAATGATGGCGAGCAGTCCTCCGGCTaGTGGCATTGGAGAGGCCAT +
Preference number: 4 (lower is better)
Translates to: GLESTGQGCSRWRCGNDGEQSSG*WHWRGH
Trigger: ATGGCCTCTCCAATGCCAGCAGCCGGAGGACTGCTC...GCCATCATTGCCACACCTCCACCTCGAGCAGCCCTGCCCTGTACTCTCCAAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR GCA 90 bp GACAGGGCAGGCATAGGCGGCGCGGAGGGCGGCCTTACCTCCGCGGAGGGGCCACCTCAGCCAGCAAGATaGTCATTTCTTTGTCACTTA +
Preference number: 4 (lower is better)
Translates to: DRAGIGGAEGGLTSAEGPPQPAR*SFLCHL
Trigger: TAAGTGACAAAGAAATGAGCATCTTGCTGGCTGAGG...TGGCCCCTCCGCGGAGGTAAGGCCGCCCTCCGCGCCGCCTATGCCTGCCCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR GCA 90 bp GGCGCGGAGGGCGGCCTTACCTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGACCTTAGACACGACATaGTTGTCCAGGACGGGAACA +
Preference number: 4 (lower is better)
Translates to: GAEGGLTSAEGPVSVSTLTLDTT*LSRTGT
Trigger: TGTTCCCGTCCTGGACAAGCATGTCGTGTCTAAGGT...CAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGGTAAGGCCGCCCTCCGCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR GCA 90 bp GACAGGGCAGGCATAGGCGGCGCGGAGGGCGGCCTTACCTCCGCGGAGGGGCCATTTTCTGTGGCCACATaGTTATTGGGAAGTGCTATG +
Preference number: 4 (lower is better)
Translates to: DRAGIGGAEGGLTSAEGPFSVAT*LLGSAM
Trigger: CATAGCACTTCCCAATAAGCATGTGGCCACAGAAAA...TGGCCCCTCCGCGGAGGTAAGGCCGCCCTCCGCGCCGCCTATGCCTGCCCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR GCA 90 bp CTCGTCTTGGCTCTCTGGAATCCTGCGTGTCCGCTTCTTTCAGTGGCCAGAAGATCCGAGGGCGCCGCCTaGTGGAGTGGCTGCTTGGCG +
Preference number: 4 (lower is better)
Translates to: LVLALWNPACPLLSVARRSEGAA*WSGCLA
Trigger: CGCCAAGCAGCCACTCCAGCAGGCGGCGCCCTCGGA...TCTTCTGGCCACTGAAAGAAGCGGACACGCAGGATTCCAGAGAGCCAAGACGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR GCA 90 bp TTACCTACAACAGACTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCTTCCGAGGGCGCCGCCTaGTGGAGTGGCTGCTTGGCG +
Preference number: 4 (lower is better)
Translates to: LPTTDSAEGPVSVSTLRSSEGAA*WSGCLA
Trigger: CGCCAAGCAGCCACTCCAGCAGGCGGCGCCCTCGGA...AGACCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGTCTGTTGTAGGTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495571.5
ENST00000614454.1
CDS-3UTR GCA 90 bp GCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCTGAACAGCCTGGAAGGACGAGTACAGGGCAGGGCTaGTCGAGGTGGAGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: AEGPVSVSTLRSEQPGRTSTGQG*SRWRCG
Trigger: GCCACACCTCCACCTCGAGCAGCCCTGCCCTGTACT...CGTCCTTCCAGGCTGTTCAGACCTCAGCGTTGACACTGAAACTGGCCCCTCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
ENST00000495571.5
ENST00000614454.1
CDS-3UTR CCA 90 bp GACCCATGGGAGCTGATGCCGTGGGAGGAGCCGTCCGAGTCCGAGGGCGCCGCCTGCTCTGTAGAGCTGTaGAAACAGACCATCAGCATA +
Preference number: 4 (lower is better)
Translates to: DPWELMPWEEPSESEGAACSVEL*KQTISI
Trigger: TATGCTGATGGTCTGTTTCCACAGCTCTACAGAGCA...GGCGGCGCCCTCGGACTCGGACGGCTCCTCCCACGGCATCAGCTCCCATGGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432242.5
CDS-3UTR CCA 90 bp GGCAGGCATAGGCGGCGCGGAGGGCGGCCTTACCTCCGCGGAGGGGCCAGTTTCTTGCATAATTCTTCTTaGCAGCCTCCTGGAGTTCCA +
Preference number: 4 (lower is better)
Translates to: GRHRRRGGRPYLRGGASFLHNSS*QPPGVP
Trigger: TGGAACTCCAGGAGGCTGCCAAGAAGAATTATGCAA...GAAACTGGCCCCTCCGCGGAGGTAAGGCCGCCCTCCGCGCCGCCTATGCCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CCA 90 bp AGGAGTCTTTGCTACAGACAGGGCAGGCATAGGCGGCGCGGAGGGCGGCCTTACAAGCCCACCAGTGCTTaGGTGCGGCTCACACACTTC +
Preference number: 4 (lower is better)
Translates to: RSLCYRQGRHRRRGGRPYKPTSA*VRLTHF
Trigger: GAAGTGTGTGAGCCGCACCCAAGCACTGGTGGGCTT...GTAAGGCCGCCCTCCGCGCCGCCTATGCCTGCCCTGTCTGTAGCAAAGACTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CCA 90 bp GGCGCGGAGGGCGGCCTTACCTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGGTCCGCTTCTTTCAGTaGCCAGAAGAGGAAAGCAGA +
Preference number: 4 (lower is better)
Translates to: GAEGGLTSAEGPVSVSTLVRFFQ*PEEESR
Trigger: TCTGCTTTCCTCTTCTGGCCACTGAAAGAAGCGGAC...CAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGGTAAGGCCGCCCTCCGCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CCA 90 bp GGAGGGCGGCCTTACCTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCCTCGTCTTGGCTCTCTaGAATCCTGCGTGTCCGCTT +
Preference number: 4 (lower is better)
Translates to: GGRPYLRGGASFSVNAEVLVLAL*NPACPL
Trigger: AAGCGGACACGCAGGATTCCAGAGAGCCAAGACGAG...GACCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGGTAAGGCCGCCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CCA 90 bp GTCTTTGCTACAGACAGGGCAGGCATAGGCGGCGCGGAGGGCGGCCTTACCTCCGGGCTTCTCTCGTCTTaGCTCTCTGGAATCCTGCGT +
Preference number: 4 (lower is better)
Translates to: VFATDRAGIGGAEGGLTSGLLSS*LSGILR
Trigger: ACGCAGGATTCCAGAGAGCCAAGACGAGAGAAGCCC...GGAGGTAAGGCCGCCCTCCGCGCCGCCTATGCCTGCCCTGTCTGTAGCAAAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CCA 90 bp GGAGGGCGGCCTTACCTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCGGGCTTCTCTCGTCTTaGCTCTCTGGAATCCTGCGT +
Preference number: 4 (lower is better)
Translates to: GGRPYLRGGASFSVNAEVGLLSS*LSGILR
Trigger: ACGCAGGATTCCAGAGAGCCAAGACGAGAGAAGCCC...GACCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGGTAAGGCCGCCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CCA 90 bp TCCTCCGGCTGCTGGCATTGGAGAGGCCATCCTTCCTTTCACTGCAAGCTGAGCCCCTGGCAGGACCCATaGGAGCTGATGCCGTGGGAG +
Preference number: 4 (lower is better)
Translates to: SSGCWHWRGHPSFHCKLSPWQDP*ELMPWE
Trigger: CTCCCACGGCATCAGCTCCCATGGGTCCTGCCAGGG...GCTCAGCTTGCAGTGAAAGGAAGGATGGCCTCTCCAATGCCAGCAGCCGGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR CCA 90 bp CCTACAACAGACTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCTGAAGGAGGTGGGCTGTCCTaGGCTCGGGGTGTGTCCCCT +
Preference number: 4 (lower is better)
Translates to: PTTDSAEGPVSVSTLRSEGGGLS*ARGVSP
Trigger: AGGGGACACACCCCGAGCCCAGGACAGCCCACCTCC...TTCAGACCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGTCTGTTGTAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000495571.5
ENST00000614454.1
CDS-3UTR CCA 90 bp AAGCCCACCAGTGCTTGGGTGCGGCTCACACACTTCTTCACAACCCCTGGAAAAGCGGGGAAGTGGAGGTaGGCTGTCCTGGGCTCGGGG +
Preference number: 4 (lower is better)
Translates to: KPTSAWVRLTHFFTTPGKAGKWR*AVLGSG
Trigger: CCCCGAGCCCAGGACAGCCCACCTCCACTTCCCCGC...TTTTCCAGGGGTTGTGAAGAAGTGTGTGAGCCGCACCCAAGCACTGGTGGGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR CCA 90 bp GGAGTCTTTGCTACAGACAGGGCAGGCATAGGCGGCGCGGAGGGCGGCCTTACCAGCCCTTTGCTGCTGTaGGTGGCTTGGAGAGTACAG +
Preference number: 4 (lower is better)
Translates to: GVFATDRAGIGGAEGGLTSPLLL*VAWRVQ
Trigger: CTGTACTCTCCAAGCCACCCACAGCAGCAAAGGGCT...GGTAAGGCCGCCCTCCGCGCCGCCTATGCCTGCCCTGTCTGTAGCAAAGACTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR TCA 90 bp ACAGACAGGGCAGGCATAGGCGGCGCGGAGGGCGGCCTTACCTCCGCGGAGGGGGAATCGACATCAGATTaGGGCTTTGCACACTTTTCT +
Preference number: 4 (lower is better)
Translates to: TDRAGIGGAEGGLTSAEGESTSD*GFAHFS
Trigger: AGAAAAGTGTGCAAAGCCTCAATCTGATGTCGATTC...CCCCTCCGCGGAGGTAAGGCCGCCCTCCGCGCCGCCTATGCCTGCCCTGTCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR TCA 90 bp GGCTTGGAGAGTACAGGGCAGGGCTGCTCGAGGTGGAGGTGTGGCAATGATGGCTGGTGTCTCCGTAACTaGAGCCCACCAGTGCTTGGG +
Preference number: 4 (lower is better)
Translates to: GLESTGQGCSRWRCGNDGWCLRN*SPPVLG
Trigger: CCCAAGCACTGGTGGGCTTCAGTTACGGAGACACCA...GCCATCATTGCCACACCTCCACCTCGAGCAGCCCTGCCCTGTACTCTCCAAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR TCA 90 bp GCGGAGGGCGGCCTTACCTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTTTCAGTGTCAACGCTaGGGTCTGAACAGCCTGGAA +
Preference number: 4 (lower is better)
Translates to: AEGGLTSAEGPVSVSTLRFQCQR*GLNSLE
Trigger: TTCCAGGCTGTTCAGACCTCAGCGTTGACACTGAAA...CCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGGTAAGGCCGCCCTCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR TCA 90 bp ACAGACAGGGCAGGCATAGGCGGCGCGGAGGGCGGCCTTACCTCCGCGGAGGGGATTTCAGGGTGTTCCTaGGATAAGCGATGTTGTGTT +
Preference number: 4 (lower is better)
Translates to: TDRAGIGGAEGGLTSAEGISGCS*DKRCCV
Trigger: AACACAACATCGCTTATCTCAGGAACACCCTGAAAT...CCCCTCCGCGGAGGTAAGGCCGCCCTCCGCGCCGCCTATGCCTGCCCTGTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473149.5
CDS-3UTR GCA 90 bp GACAGGGCAGGCATAGGCGGCGCGGAGGGCGGCCTTACCTCCGCGGAGGGGCCATCAGATTGTATACTCTaGCATCTTCTGCTCTGTAGA +
Preference number: 4 (lower is better)
Translates to: DRAGIGGAEGGLTSAEGPSDCIL*HLLLCR
Trigger: TCTACAGAGCAGAAGATGGCAGAGTATACAATCTGA...TGGCCCCTCCGCGGAGGTAAGGCCGCCCTCCGCGCCGCCTATGCCTGCCCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477737.6
CDS-3UTR GCA 90 bp GCGGAGGGCGGCCTTACCTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGATGACACCAAAAATCTaGCGGCTCTTGCTGGTGAGC +
Preference number: 4 (lower is better)
Translates to: AEGGLTSAEGPVSVSTLRMTPKI*RLLLVS
Trigger: GCTCACCAGCAAGAGCCGGCAGATTTTTGGTGTCAT...CCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGGTAAGGCCGCCCTCCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000477737.6
CDS-3UTR GCA 90 bp CCGTGGGAGGAGCCGTCCGAGTCCGAGGGCGCCGCCTGCTGGAGTGGCTGCTTGGCTGATCTTAATAAGTaGACTCCGAGGGCAAAATTC +
Preference number: 4 (lower is better)
Translates to: PWEEPSESEGAACWSGCLADLNK*TPRAKF
Trigger: GAATTTTGCCCTCGGAGTGCACTTATTAAGATCAGC...CAAGCAGCCACTCCAGCAGGCGGCGCCCTCGGACTCGGACGGCTCCTCCCACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR GCA 90 bp CAGGGCAGGGCTGCTCGAGGTGGAGGTGTGGCAATGATGGCGTGGCTGCTGAGTGGGGAGAGGAGTCTTTaGTACAGACAGGGCAGGCAT +
Preference number: 4 (lower is better)
Translates to: QGRAARGGGVAMMAWLLSGERSL*YRQGRH
Trigger: ATGCCTGCCCTGTCTGTAGCAAAGACTCCTCTCCCC...ACTCAGCAGCCACGCCATCATTGCCACACCTCCACCTCGAGCAGCCCTGCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000489630.5
CDS-3UTR CCA 90 bp GCGGAGGGCGGCCTTACCTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGGGAGGAGAAGCTCCTTaGATTCTTCAGGAACATCCC +
Preference number: 4 (lower is better)
Translates to: AEGGLTSAEGPVSVSTLRGGEAP*ILQEHP
Trigger: GGGATGTTCCTGAAGAATCCAAGGAGCTTCTCCTCC...CCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGGTAAGGCCGCCCTCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000477737.6
CDS-3UTR CCA 90 bp GGAGGGCGGCCTTACCTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCATCTCCAAGGCCCTCTaGAGGAGAAGCTCCTTGGAT +
Preference number: 4 (lower is better)
Translates to: GGRPYLRGGASFSVNAEVISKAL*RRSSLD
Trigger: ATCCAAGGAGCTTCTCCTCCAGAGGGCCTTGGAGAT...GACCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGGTAAGGCCGCCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000477737.6
CDS-3UTR CCA 90 bp CTCTCCCGGCTTCCAGCAGAGCATCCAGGCGGCCAGCCTCGCTCACAGTCAGCTCTCTCGGCAAATGCGTaGAATCTGCTGTGGGTCTTG +
Preference number: 4 (lower is better)
Translates to: LSRLPAEHPGGQPRSQSALSANA*NLLWVL
Trigger: CAAGACCCACAGCAGATTCCACGCATTTGCCGAGAG...AGCTGACTGTGAGCGAGGCTGGCCGCCTGGATGCTCTGCTGGAAGCCGGGAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422503.6
ENST00000432242.5
CDS-3UTR CCA 90 bp GGCAGGCATAGGCGGCGCGGAGGGCGGCCTTACCTCCGCGGAGGGGCCAGTTTCTACAAGGATAGCTTCTaGGCCTTCAAGCCATATTTC +
Preference number: 4 (lower is better)
Translates to: GRHRRRGGRPYLRGGASFYKDSF*AFKPYF
Trigger: GAAATATGGCTTGAAGGCCCAGAAGCTATCCTTGTA...GAAACTGGCCCCTCCGCGGAGGTAAGGCCGCCCTCCGCGCCGCCTATGCCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000477737.6
CDS-3UTR CCA 90 bp GGAGGGGAGAGGAGTCTTTGCTACAGACAGGGCAGGCATAGGCGGCGCGGAGGGATTCTGAACAGCCTCTaGGGGAGTGGGATCCTTGCA +
Preference number: 4 (lower is better)
Translates to: GGERSLCYRQGRHRRRGGILNSL*GSGILA
Trigger: TGCAAGGATCCCACTCCCCCAGAGGCTGTTCAGAAT...CCCTCCGCGCCGCCTATGCCTGCCCTGTCTGTAGCAAAGACTCCTCTCCCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
CDS-3UTR CCA 90 bp GGGATGGAGGGGAGAGGAGTCTTTGCTACAGACAGGGCAGGCATAGGCGGCGCGTCCGGCTGCTGGCATTaGAGAGGCCATCCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: GMEGRGVFATDRAGIGGASGCWH*RGHPSF
Trigger: AAAGGAAGGATGGCCTCTCCAATGCCAGCAGCCGGA...CGCGCCGCCTATGCCTGCCCTGTCTGTAGCAAAGACTCCTCTCCCCTCCATCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CCA 90 bp AGGAGTCTTTGCTACAGACAGGGCAGGCATAGGCGGCGCGGAGGGCGGCCTTACCTCGTCTTGGCTCTCTaGAATCCTGCGTGTCCGCTT +
Preference number: 4 (lower is better)
Translates to: RSLCYRQGRHRRRGGRPYLVLAL*NPACPL
Trigger: AAGCGGACACGCAGGATTCCAGAGAGCCAAGACGAG...GTAAGGCCGCCCTCCGCGCCGCCTATGCCTGCCCTGTCTGTAGCAAAGACTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CCA 90 bp TCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCTGAACAGCCTGGAAGGGCTGGAGTGGCTGCTTaGCGGGCCTCTTTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: SAEGPVSVSTLRSEQPGRAGVAA*RASFSS
Trigger: GGAGGAAAAAGAGGCCCGCCAAGCAGCCACTCCAGC...CCTTCCAGGCTGTTCAGACCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
ENST00000495571.5
ENST00000614454.1
CDS-3UTR CCA 90 bp TTACCTACAACAGACTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCTCGCCGCCTGCTGGAGTaGCTGCTTGGCGGGCCTCTT +
Preference number: 4 (lower is better)
Translates to: LPTTDSAEGPVSVSTLRSRRLLE*LLGGPL
Trigger: AAGAGGCCCGCCAAGCAGCCACTCCAGCAGGCGGCG...AGACCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGTCTGTTGTAGGTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495571.5
ENST00000614454.1
CDS-3UTR CCA 90 bp TCAACAGAGGTTGTTTCTGACTCGCAGTCCACAGTGGCCACGTCGGGCTTGGGATCGGGGTGTGTCCCCTaGCAGGACCCATGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: STEVVSDSQSTVATSGLGSGCVP*QDPWEL
Trigger: CAGCTCCCATGGGTCCTGCCAGGGGACACACCCCGA...TCCCAAGCCCGACGTGGCCACTGTGGACTGCGAGTCAGAAACAACCTCTGTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432242.5
CDS-3UTR CCA 90 bp TCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCTGAACAGCCTGGAAGGCAGGGCTGCTCGAGGTaGAGGTGTGGCAATGATGGC +
Preference number: 4 (lower is better)
Translates to: SAEGPVSVSTLRSEQPGRQGCSR*RCGNDG
Trigger: GCCATCATTGCCACACCTCCACCTCGAGCAGCCCTG...CCTTCCAGGCTGTTCAGACCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
ENST00000495571.5
ENST00000614454.1
CDS-3UTR CCA 90 bp GAGGGCGGCCTTACCTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCTGGGTCTTTGCTGCACTaGAGCCTAAACAGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: EGGLTSAEGPVSVSTLRSGSLLH*SLNRPR
Trigger: TCTGGGCCTGTTTAGGCTCCAGTGCAGCAAAGACCC...AGACCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGGTAAGGCCGCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473149.5
CDS-3UTR CCA 90 bp AGTCAGAAAAAGCCAGAACCAAGTCGTCAAACGGGTAGGGGAGGCAGCAGGGATCCGGCCGCGGGGAAGTaGAGGTGGGCTGTCTGGGGA +
Preference number: 4 (lower is better)
Translates to: SQKKPEPSRQTGRGGSRDPAAGK*RWAVWG
Trigger: TCCCCAGACAGCCCACCTCCACTTCCCCGCGGCCGG...ATCCCTGCTGCCTCCCCTACCCGTTTGACGACTTGGTTCTGGCTTTTTCTGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000473149.5
CDS-3UTR TCA 90 bp GGGATGGAGGGGAGAGGAGTCTTTGCTACAGACAGGGCAGGCATAGGCGGCGCGGTCAGATCTTCATTCTaGACAGCCTCTGGGGGAGTG +
Preference number: 4 (lower is better)
Translates to: GMEGRGVFATDRAGIGGAVRSSF*TASGGV
Trigger: CACTCCCCCAGAGGCTGTTCAGAATGAAGATCTGAC...CGCGCCGCCTATGCCTGCCCTGTCTGTAGCAAAGACTCCTCTCCCCTCCATCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
CDS-3UTR TCA 90 bp TCTCCCGGCTTCCAGCAGAGCATCCAGGCGGCCAGCCTCGCTCACAGTCAGCTCCTGAACCTTTTGATCTaGAAGGCCCCATGGTCCCTT +
Preference number: 4 (lower is better)
Translates to: SPGFQQSIQAASLAHSQLLNLLI*KAPWSL
Trigger: AAGGGACCATGGGGCCTTTCAGATCAAAAGGTTCAG...GAGCTGACTGTGAGCGAGGCTGGCCGCCTGGATGCTCTGCTGGAAGCCGGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432242.5
CDS-3UTR TCA 90 bp GTCTTTGCTACAGACAGGGCAGGCATAGGCGGCGCGGAGGGCGGCCTTACCTCCCTGAACCTTTTGATCTaGAAGGCCCCATGGTCCCTT +
Preference number: 4 (lower is better)
Translates to: VFATDRAGIGGAEGGLTSLNLLI*KAPWSL
Trigger: AAGGGACCATGGGGCCTTTCAGATCAAAAGGTTCAG...GGAGGTAAGGCCGCCCTCCGCGCCGCCTATGCCTGCCCTGTCTGTAGCAAAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR TCA 90 bp AGGAGTCTTTGCTACAGACAGGGCAGGCATAGGCGGCGCGGAGGGCGGCCTTACAGGACATCTGGCTTCTaGGCAGGCTGGTTTTGGTTG +
Preference number: 4 (lower is better)
Translates to: RSLCYRQGRHRRRGGRPYRTSGF*AGWFWL
Trigger: CAACCAAAACCAGCCTGCTCAGAAGCCAGATGTCCT...GTAAGGCCGCCCTCCGCGCCGCCTATGCCTGCCCTGTCTGTAGCAAAGACTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR TCA 90 bp GCTTGGAGAGTACAGGGCAGGGCTGCTCGAGGTGGAGGTGTGGCAATGATGGCGCCTTTCACTGCAAGCTaGGCTCCTGAGGGAGGACAT +
Preference number: 4 (lower is better)
Translates to: AWRVQGRAARGGGVAMMAPFTAS*APEGGH
Trigger: ATGTCCTCCCTCAGGAGCTCAGCTTGCAGTGAAAGG...CGCCATCATTGCCACACCTCCACCTCGAGCAGCCCTGCCCTGTACTCTCCAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR TCA 90 bp CAGGGCAGGCATAGGCGGCGCGGAGGGCGGCCTTACCTCCGCGGAGGGGCCAGTTTTTCTTTTTCCTCTTaGGATAATGCTCGCCAAACA +
Preference number: 4 (lower is better)
Translates to: QGRHRRRGGRPYLRGGASFSFSS*DNARQT
Trigger: TGTTTGGCGAGCATTATCTCAAGAGGAAAAAGAAAA...ACTGGCCCCTCCGCGGAGGTAAGGCCGCCCTCCGCGCCGCCTATGCCTGCCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR TCA 90 bp GCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCTGAACAGCCTGGAAGGACGTGGTGTCTCCGTAACTaGAGCCCACCAGTGCTTGGG +
Preference number: 4 (lower is better)
Translates to: AEGPVSVSTLRSEQPGRTWCLRN*SPPVLG
Trigger: CCCAAGCACTGGTGGGCTTCAGTTACGGAGACACCA...CGTCCTTCCAGGCTGTTCAGACCTCAGCGTTGACACTGAAACTGGCCCCTCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
ENST00000495571.5
ENST00000614454.1
CDS-3UTR TCA 90 bp GGAGTCTTTGCTACAGACAGGGCAGGCATAGGCGGCGCGGAGGGCGGCCTTACCGGGGGTGACTTTATATaGGAGCAAGAGAGCGCATAC +
Preference number: 4 (lower is better)
Translates to: GVFATDRAGIGGAEGGLTGGDFI*EQESAY
Trigger: GTATGCGCTCTCTTGCTCTCATATAAAGTCACCCCC...GGTAAGGCCGCCCTCCGCGCCGCCTATGCCTGCCCTGTCTGTAGCAAAGACTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR GCA 90 bp TCCTCCGGCTGCTGGCATTGGAGAGGCCATCCTTCCTTTCACTGCAAGCTGAGCGAGCAGTCCTCCGGCTaGTGGCATTGGAGAGGCCAT +
Preference number: 4 (lower is better)
Translates to: SSGCWHWRGHPSFHCKLSEQSSG*WHWRGH
Trigger: ATGGCCTCTCCAATGCCAGCAGCCGGAGGACTGCTC...GCTCAGCTTGCAGTGAAAGGAAGGATGGCCTCTCCAATGCCAGCAGCCGGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR GCA 90 bp GAGGGCGGCCTTACCTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCTGGCTCTCTGGAATCCTaGGTGTCCGCTTCTTTCAGT +
Preference number: 4 (lower is better)
Translates to: EGGLTSAEGPVSVSTLRSGSLES*VSASFS
Trigger: ACTGAAAGAAGCGGACACGCAGGATTCCAGAGAGCC...AGACCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGGTAAGGCCGCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CCA 90 bp ATGGAGGGGAGAGGAGTCTTTGCTACAGACAGGGCAGGCATAGGCGGCGCGGAGGCGTGGAATCTGCTGTaGGTCTTGGCACTCAGATCC +
Preference number: 4 (lower is better)
Translates to: MEGRGVFATDRAGIGGAEAWNLL*VLALRS
Trigger: GGATCTGAGTGCCAAGACCCACAGCAGATTCCACGC...CTCCGCGCCGCCTATGCCTGCCCTGTCTGTAGCAAAGACTCCTCTCCCCTCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000477737.6
CDS-3UTR CCA 90 bp GCTGTATGGAATGAAGGAAACAGCTCCAGAGCGAGAGACTTGGGCTTGAAGCTCTGGCCACGTCGGGCTTaGGAGGCTCGGCCACCAGCC +
Preference number: 4 (lower is better)
Translates to: AVWNEGNSSRARDLGLKLWPRRA*EARPPA
Trigger: GGCTGGTGGCCGAGCCTCCCAAGCCCGACGTGGCCA...GAGCTTCAAGCCCAAGTCTCTCGCTCTGGAGCTGTTTCCTTCATTCCATACAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422503.6
ENST00000432242.5
ENST00000433678.5
CDS-3UTR CCA 90 bp GGCTTGGAGAGTACAGGGCAGGGCTGCTCGAGGTGGAGGTGTGGCAATGATGGCCTGAGGGAGGACATCTaGCTTCTGAGCAGGCTGGTT +
Preference number: 4 (lower is better)
Translates to: GLESTGQGCSRWRCGNDGLREDI*LLSRLV
Trigger: AACCAGCCTGCTCAGAAGCCAGATGTCCTCCCTCAG...GCCATCATTGCCACACCTCCACCTCGAGCAGCCCTGCCCTGTACTCTCCAAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR CCA 90 bp ATGGAGGGGAGAGGAGTCTTTGCTACAGACAGGGCAGGCATAGGCGGCGCGGAGCTGAGGGAGGACATCTaGCTTCTGAGCAGGCTGGTT +
Preference number: 4 (lower is better)
Translates to: MEGRGVFATDRAGIGGAELREDI*LLSRLV
Trigger: AACCAGCCTGCTCAGAAGCCAGATGTCCTCCCTCAG...CTCCGCGCCGCCTATGCCTGCCCTGTCTGTAGCAAAGACTCCTCTCCCCTCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CCA 90 bp TACAGACAGGGCAGGCATAGGCGGCGCGGAGGGCGGCCTTACCTCCGCGGAGGGGCTCTTTCAGTGAAATaGGCCAATTCAACCGTTCTA +
Preference number: 4 (lower is better)
Translates to: YRQGRHRRRGGRPYLRGGALSVK*ANSTVL
Trigger: TAGAACGGTTGAATTGGCCCATTTCACTGAAAGAGC...CCCTCCGCGGAGGTAAGGCCGCCCTCCGCGCCGCCTATGCCTGCCCTGTCTGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CCA 90 bp GACAGGGCAGGCATAGGCGGCGCGGAGGGCGGCCTTACCTCCGCGGAGGGGCCATGTAGAATTTTTCTGTaGCCACATGCTTATTGGGAA +
Preference number: 4 (lower is better)
Translates to: DRAGIGGAEGGLTSAEGPCRIFL*PHAYWE
Trigger: TTCCCAATAAGCATGTGGCCACAGAAAAATTCTACA...TGGCCCCTCCGCGGAGGTAAGGCCGCCCTCCGCGCCGCCTATGCCTGCCCTGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CCA 90 bp GGAGTCTTTGCTACAGACAGGGCAGGCATAGGCGGCGCGGAGGGCGGCCTTACCGTCCGCTTCTTTCAGTaGCCAGAAGAGGAAAGCAGA +
Preference number: 4 (lower is better)
Translates to: GVFATDRAGIGGAEGGLTVRFFQ*PEEESR
Trigger: TCTGCTTTCCTCTTCTGGCCACTGAAAGAAGCGGAC...GGTAAGGCCGCCCTCCGCGCCGCCTATGCCTGCCCTGTCTGTAGCAAAGACTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CCA 90 bp TTGGCTTTTATATCCACAACCCCATCAGCGTGGCGGAAAGAGCAGTCGGCAAGCGGAGGTGGGCTGTCCTaGGCTCGGGGTGTGTCCCCT +
Preference number: 4 (lower is better)
Translates to: LAFISTTPSAWRKEQSASGGGLS*ARGVSP
Trigger: AGGGGACACACCCCGAGCCCAGGACAGCCCACCTCC...GCTTGCCGACTGCTCTTTCCGCCACGCTGATGGGGTTGTGGATATAAAAGCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000432242.5
CDS-3UTR CCA 90 bp AAAGAGTCAGATCTTCATTCTGAACAGCCTCTGGGGGAGTGGGATCCTTGCAACCCGGCCGCGGGGAAGTaGAGGTGGGCTGTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: KESDLHSEQPLGEWDPCNPAAGK*RWAVLG
Trigger: GCCCAGGACAGCCCACCTCCACTTCCCCGCGGCCGG...GTTGCAAGGATCCCACTCCCCCAGAGGCTGTTCAGAATGAAGATCTGACTCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000495571.5
CDS-3UTR CCA 90 bp GCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCTGAACAGCCTGGAAGGACGGTGGCAATGATGGCGTaGCTGCTGAGTCCTAGACGC +
Preference number: 4 (lower is better)
Translates to: AEGPVSVSTLRSEQPGRTVAMMA*LLSPRR
Trigger: GCGTCTAGGACTCAGCAGCCACGCCATCATTGCCAC...CGTCCTTCCAGGCTGTTCAGACCTCAGCGTTGACACTGAAACTGGCCCCTCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
ENST00000495571.5
ENST00000614454.1
CDS-3UTR CCA 90 bp ACAGACTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCTGAACAGCCTCTGCTGTGGGTGGCTTaGAGAGTACAGGGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: TDSAEGPVSVSTLRSEQPLLWVA*RVQGRA
Trigger: AGCCCTGCCCTGTACTCTCCAAGCCACCCACAGCAG...AGGCTGTTCAGACCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495571.5
ENST00000614454.1
CDS-3UTR CCA 90 bp GCGGAGGGCGGCCTTACCTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGACAAGATTGCGGGCTTaGATCCTGACTATGCTGACT +
Preference number: 4 (lower is better)
Translates to: AEGGLTSAEGPVSVSTLRTRLRA*ILTMLT
Trigger: AGTCAGCATAGTCAGGATCCAAGCCCGCAATCTTGT...CCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGGTAAGGCCGCCCTCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR TCA 90 bp GTCTTGTCTCTCCCGGCTTCCAGCAGAGCATCCAGGCGGCCAGCCTCGCTCACACTTCCAAAGAGGCTTTaGCTCCCATCCTGTAGCCAT +
Preference number: 4 (lower is better)
Translates to: VLSLPASSRASRRPASLTLPKRL*LPSCSH
Trigger: ATGGCTACAGGATGGGAGTCAAAGCCTCTTTGGAAG...TGTGAGCGAGGCTGGCCGCCTGGATGCTCTGCTGGAAGCCGGGAGAGACAAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422503.6
ENST00000432242.5
CDS-3UTR TCA 90 bp GGAGGGGAGAGGAGTCTTTGCTACAGACAGGGCAGGCATAGGCGGCGCGGAGGGCGCCAAGCAACTGCTTaGCCATCAAACTTCACAAAG +
Preference number: 4 (lower is better)
Translates to: GGERSLCYRQGRHRRRGGRQATA*PSNFTK
Trigger: CTTTGTGAAGTTTGATGGTCAAGCAGTTGCTTGGCG...CCCTCCGCGCCGCCTATGCCTGCCCTGTCTGTAGCAAAGACTCCTCTCCCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000477737.6
CDS-3UTR TCA 90 bp TCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCTGAACAGCCTGGAAGGACTGTTTCAGGTGGCTaGTCAGGTCTCCCATCGGTC +
Preference number: 4 (lower is better)
Translates to: SAEGPVSVSTLRSEQPGRTVSGG*SGLPSV
Trigger: GACCGATGGGAGACCTGATCAGCCACCTGAAACAGT...CCTTCCAGGCTGTTCAGACCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR TCA 90 bp ATGGAGGGGAGAGGAGTCTTTGCTACAGACAGGGCAGGCATAGGCGGCGCGGAGGTCAGATCTTCATTCTaGACAGCCTCTGGGGGAGTG +
Preference number: 4 (lower is better)
Translates to: MEGRGVFATDRAGIGGAEVRSSF*TASGGV
Trigger: CACTCCCCCAGAGGCTGTTCAGAATGAAGATCTGAC...CTCCGCGCCGCCTATGCCTGCCCTGTCTGTAGCAAAGACTCCTCTCCCCTCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
CDS-3UTR TCA 90 bp GCGGAGGGCGGCCTTACCTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTTCTCCAGATCACTGTaGCCCTGTTCCATTTCCTTA +
Preference number: 4 (lower is better)
Translates to: AEGGLTSAEGPVSVSTLRFSRSL*PCSISL
Trigger: TAAGGAAATGGAACAGGGTCACAGTGATCTGGAGAA...CCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGGTAAGGCCGCCCTCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
CDS-3UTR TCA 90 bp GGAGGGGAGAGGAGTCTTTGCTACAGACAGGGCAGGCATAGGCGGCGCGGAGGGGAACAGATTTCCTTTTaGTGCCTGAACAGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: GGERSLCYRQGRHRRRGGEQISF*CLNSLW
Trigger: CCAGAGGCTGTTCAGGCATCAAAAGGAAATCTGTTC...CCCTCCGCGCCGCCTATGCCTGCCCTGTCTGTAGCAAAGACTCCTCTCCCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000489630.5
CDS-3UTR GCA 90 bp GCGGAGGGCGGCCTTACCTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGGTCTCCATCCTTTTCTaGATTGTACCACCAGTCCAT +
Preference number: 4 (lower is better)
Translates to: AEGGLTSAEGPVSVSTLRVSILF*IVPPVH
Trigger: ATGGACTGGTGGTACAATGCAGAAAAGGATGGAGAC...CCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGGTAAGGCCGCCCTCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
CDS-3UTR GCA 90 bp TACAGACAGGGCAGGCATAGGCGGCGCGGAGGGCGGCCTTACCTCCGCGGAGGGTTTCCTTTTGATGCTTaGTGTCTCCATCCTTTTCTG +
Preference number: 4 (lower is better)
Translates to: YRQGRHRRRGGRPYLRGGFPFDA*CLHPFL
Trigger: CAGAAAAGGATGGAGACAGCAAGCATCAAAAGGAAA...CCCTCCGCGGAGGTAAGGCCGCCCTCCGCGCCGCCTATGCCTGCCCTGTCTGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
CDS-3UTR GCA 90 bp ATAGTCTTGTCTCTCCCGGCTTCCAGCAGAGCATCCAGGCGGCCAGCCTCGCTCGTCGTTGCACACATGTaGCAGAGGGAACACCTCATC +
Preference number: 4 (lower is better)
Translates to: IVLSLPASSRASRRPASLVVAHM*QREHLI
Trigger: GATGAGGTGTTCCCTCTGGCACATGTGTGCAACGAC...GAGCGAGGCTGGCCGCCTGGATGCTCTGCTGGAAGCCGGGAGAGACAAGACTAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432242.5
CDS-3UTR GCA 90 bp ACAGACAGGGCAGGCATAGGCGGCGCGGAGGGCGGCCTTACCTCCGCGGAGGGGTTCATAGGATTGAATTaGCTGTTCCACTTTTCGCTT +
Preference number: 4 (lower is better)
Translates to: TDRAGIGGAEGGLTSAEGFIGLN*LFHFSL
Trigger: AAGCGAAAAGTGGAACAGGCAATTCAATCCTATGAA...CCCCTCCGCGGAGGTAAGGCCGCCCTCCGCGCCGCCTATGCCTGCCCTGTCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR GCA 90 bp ATTTCTGTTGCTCTCCCGGGGCCTTGTTTGCATAATTCTTCTTGGCAGCCTCCTTCCGAGGGCGCCGCCTaGTGGAGTGGCTGCTTGGCG +
Preference number: 4 (lower is better)
Translates to: ISVALPGPCLHNSSWQPPSEGAA*WSGCLA
Trigger: CGCCAAGCAGCCACTCCAGCAGGCGGCGCCCTCGGA...AGGAGGCTGCCAAGAAGAATTATGCAAACAAGGCCCCGGGAGAGCAACAGAAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR GCA 90 bp GACCTTAGACACGACATGCTTGTCCAGGACGGGAACATAGGTGGAGCTGTGCGGCGCTCCTCAGCCCTTTaGTGCTGTGGGTGGCTTGGA +
Preference number: 4 (lower is better)
Translates to: DLRHDMLVQDGNIGGAVRRSSAL*CCGWLG
Trigger: TCCAAGCCACCCACAGCAGCAAAGGGCTGAGGAGCG...CCGCACAGCTCCACCTATGTTCCCGTCCTGGACAAGCATGTCGTGTCTAAGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR CCA 90 bp TTATATCCACAACCCCATCAGCGTGGCGGAAAGAGCAGTCGGCAAGCACATCATGTCGGGTGGAAGACGTaGCGGCTCCCGCTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: LYPQPHQRGGKSSRQAHHVGWKT*RLPLSS
Trigger: GCTGCTGAGCGGGAGCCGCCACGTCTTCCACCCGAC...ATGATGTGCTTGCCGACTGCTCTTTCCGCCACGCTGATGGGGTTGTGGATATAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000422503.6
ENST00000432242.5
ENST00000448638.5
CDS-3UTR CCA 90 bp GCGGAGGGCGGCCTTACCTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGATCTGCTGTGGGTCTTaGCACTCAGATCCTTTAGAA +
Preference number: 4 (lower is better)
Translates to: AEGGLTSAEGPVSVSTLRICCGS*HSDPLE
Trigger: TTCTAAAGGATCTGAGTGCCAAGACCCACAGCAGAT...CCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGGTAAGGCCGCCCTCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000477737.6
CDS-3UTR CCA 90 bp TCTTCTTGTTCGTCTCCGCACTGGTCTGCACGGACTCATTCTCCGGTTTGGCTTTCGGCCACCAGCCTCTaGATCTGGGCCAGCGTGCTG +
Preference number: 4 (lower is better)
Translates to: SSCSSPHWSARTHSPVWLSATSL*IWASVL
Trigger: CAGCACGCTGGCCCAGATCCAGAGGCTGGTGGCCGA...AAGCCAAACCGGAGAATGAGTCCGTGCAGACCAGTGCGGAGACGAACAAGAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422503.6
CDS-3UTR CCA 90 bp AGTCAGAAAAAGCCAGAACCAAGTCGTCAAACGGGTAGGGGAGGCAGCAGGGATTCGGCCACCAGCCTCTaGATCTGGGCCAGCGTGCTG +
Preference number: 4 (lower is better)
Translates to: SQKKPEPSRQTGRGGSRDSATSL*IWASVL
Trigger: CAGCACGCTGGCCCAGATCCAGAGGCTGGTGGCCGA...ATCCCTGCTGCCTCCCCTACCCGTTTGACGACTTGGTTCTGGCTTTTTCTGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000477737.6
CDS-3UTR CCA 90 bp GGTCTGAACAGCCTGGAAGGACGCTGGTCTCTTAAACATAGCTGCCACCAGACGACTCGCAGTCCACAGTaGCCACGTCGGGCTTGGGAG +
Preference number: 4 (lower is better)
Translates to: GLNSLEGRWSLKHSCHQTTRSPQ*PRRAWE
Trigger: CTCCCAAGCCCGACGTGGCCACTGTGGACTGCGAGT...CGTCTGGTGGCAGCTATGTTTAAGAGACCAGCGTCCTTCCAGGCTGTTCAGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000477737.6
CDS-3UTR CCA 90 bp CATAGCTGCCACCAGACGGCCTTAAAGTGTCTCAGGGACGCTCCTCAGCCCTTTCAGTCCTCCGGCTGCTaGCATTGGAGAGGCCATCCT +
Preference number: 4 (lower is better)
Translates to: HSCHQTALKCLRDAPQPFQSSGC*HWRGHP
Trigger: AGGATGGCCTCTCCAATGCCAGCAGCCGGAGGACTG...AAAGGGCTGAGGAGCGTCCCTGAGACACTTTAAGGCCGTCTGGTGGCAGCTATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR CCA 90 bp GATGAAGGAGGTGGACACGACCTTGGTGTCTCCGTAACTGAAGCCCACCAGTGCGGACGGGAACATAGGTaGAGCTGTGCGGGACTGCTG +
Preference number: 4 (lower is better)
Translates to: DEGGGHDLGVSVTEAHQCGREHR*SCAGLL
Trigger: CAGCAGTCCCGCACAGCTCCACCTATGTTCCCGTCC...GCACTGGTGGGCTTCAGTTACGGAGACACCAAGGTCGTGTCCACCTCCTTCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR CCA 90 bp GGAGTCTTTGCTACAGACAGGGCAGGCATAGGCGGCGCGGAGGGCGGCCTTACCAGTTCCATGGCCTGCTaGATGTACATTTTCCCAGCT +
Preference number: 4 (lower is better)
Translates to: GVFATDRAGIGGAEGGLTSSMAC*MYIFPA
Trigger: AGCTGGGAAAATGTACATCCAGCAGGCCATGGAACT...GGTAAGGCCGCCCTCCGCGCCGCCTATGCCTGCCCTGTCTGTAGCAAAGACTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CCA 90 bp CTCTCCCGGCTTCCAGCAGAGCATCCAGGCGGCCAGCCTCGCTCACAGTCAGCTGAGTTTCCTCATCTGTaGCTCAGAACTGATACTCCC +
Preference number: 4 (lower is better)
Translates to: LSRLPAEHPGGQPRSQSAEFPHL*LRTDTP
Trigger: GGGAGTATCAGTTCTGAGCCACAGATGAGGAAACTC...AGCTGACTGTGAGCGAGGCTGGCCGCCTGGATGCTCTGCTGGAAGCCGGGAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422503.6
ENST00000432242.5
CDS-3UTR CCA 90 bp TTGGAGAGTACAGGGCAGGGCTGCTCGAGGTGGAGGTGTGGCAATGATGGCGTGCTCGTCTTGGCTCTCTaGAATCCTGCGTGTCCGCTT +
Preference number: 4 (lower is better)
Translates to: LESTGQGCSRWRCGNDGVLVLAL*NPACPL
Trigger: AAGCGGACACGCAGGATTCCAGAGAGCCAAGACGAG...CACGCCATCATTGCCACACCTCCACCTCGAGCAGCCCTGCCCTGTACTCTCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR CCA 90 bp GTTACCTACAACAGACTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCGCTGGAGTGGCTGCTTaGCGGGCCTCTTTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: VTYNRLRGGASFSVNAEVAGVAA*RASFSS
Trigger: GGAGGAAAAAGAGGCCCGCCAAGCAGCCACTCCAGC...GACCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGTCTGTTGTAGGTAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000495571.5
ENST00000614454.1
CDS-3UTR CCA 90 bp CTTACCTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCTGAACAGCCTGTGGCAATGATGGCGTaGCTGCTGAGTCCTAGACGC +
Preference number: 4 (lower is better)
Translates to: LTSAEGPVSVSTLRSEQPVAMMA*LLSPRR
Trigger: GCGTCTAGGACTCAGCAGCCACGCCATCATTGCCAC...AGGCTGTTCAGACCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGGTAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CCA 90 bp TCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCTGAACAGCCTGGAAGGCTTTGCTGCTGTGGGTaGCTTGGAGAGTACAGGGCA +
Preference number: 4 (lower is better)
Translates to: SAEGPVSVSTLRSEQPGRLCCCG*LGEYRA
Trigger: TGCCCTGTACTCTCCAAGCCACCCACAGCAGCAAAG...CCTTCCAGGCTGTTCAGACCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
ENST00000495571.5
ENST00000614454.1
CDS-3UTR CCA 90 bp GACTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCTGAACAGCCTGGAAGCCCTTTGCTGCTGTaGGTGGCTTGGAGAGTACAG +
Preference number: 4 (lower is better)
Translates to: DSAEGPVSVSTLRSEQPGSPLLL*VAWRVQ
Trigger: CTGTACTCTCCAAGCCACCCACAGCAGCAAAGGGCT...TCCAGGCTGTTCAGACCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495571.5
ENST00000614454.1
CDS-3UTR TCA 90 bp GTCTTTGCTACAGACAGGGCAGGCATAGGCGGCGCGGAGGGCGGCCTTACCTCCGAACAGATTTCCTTTTaGTGCTTGCTGTCTCCATCC +
Preference number: 4 (lower is better)
Translates to: VFATDRAGIGGAEGGLTSEQISF*CLLSPS
Trigger: GGATGGAGACAGCAAGCATCAAAAGGAAATCTGTTC...GGAGGTAAGGCCGCCCTCCGCGCCGCCTATGCCTGCCCTGTCTGTAGCAAAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
CDS-3UTR TCA 90 bp TCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCTGAACAGCCTGGAAGGAGGACATCTGGCTTCTaGGCAGGCTGGTTTTGGTTG +
Preference number: 4 (lower is better)
Translates to: SAEGPVSVSTLRSEQPGRRTSGF*AGWFWL
Trigger: CAACCAAAACCAGCCTGCTCAGAAGCCAGATGTCCT...CCTTCCAGGCTGTTCAGACCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
ENST00000495571.5
CDS-3UTR TCA 90 bp GCTCTCCCGGGGCCTTGTTTGCATAATTCTTCTTGGCAGCCTCCTGGAGTTCCACGGGACTGCTGCCACTaGCAAGGCATCCATGAGGGT +
Preference number: 4 (lower is better)
Translates to: ALPGPCLHNSSWQPPGVPRDCCH*QGIHEG
Trigger: ACCCTCATGGATGCCTTGTCAGTGGCAGCAGTCCCG...TGGAACTCCAGGAGGCTGCCAAGAAGAATTATGCAAACAAGGCCCCGGGAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR TCA 90 bp TACAGACAGGGCAGGCATAGGCGGCGCGGAGGGCGGCCTTACCTCCGCGGAGGGACAAGTTACCGAGTCTaGATTTCAGTCCTAATATTG +
Preference number: 4 (lower is better)
Translates to: YRQGRHRRRGGRPYLRGGTSYRV*ISVLIL
Trigger: CAATATTAGGACTGAAATTCAGACTCGGTAACTTGT...CCCTCCGCGGAGGTAAGGCCGCCCTCCGCGCCGCCTATGCCTGCCCTGTCTGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR GCA 90 bp GCGGAGGGCGGCCTTACCTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGGAGCATGGACAAACCTaGTGCAATATTTTGCATGGA +
Preference number: 4 (lower is better)
Translates to: AEGGLTSAEGPVSVSTLREHGQT*CNILHG
Trigger: TCCATGCAAAATATTGCAGCAGGTTTGTCCATGCTC...CCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGGTAAGGCCGCCCTCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477737.6
CDS-3UTR GCA 90 bp GGGATGGAGGGGAGAGGAGTCTTTGCTACAGACAGGGCAGGCATAGGCGGCGCGTTCCCGCCAAGCAACTaGTTGACCATCAAACTTCAC +
Preference number: 4 (lower is better)
Translates to: GMEGRGVFATDRAGIGGAFPPSN*LTIKLH
Trigger: GTGAAGTTTGATGGTCAAGCAGTTGCTTGGCGGGAA...CGCGCCGCCTATGCCTGCCCTGTCTGTAGCAAAGACTCCTCTCCCCTCCATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000477737.6
CDS-3UTR GCA 90 bp ACAGTCAGAAAAAGCCAGAACCAAGTCGTCAAACGGGTAGGGGAGGCAGCAGGGGAGCAGTCCTCCGGCTaGTGGCATTGGAGAGGCCAT +
Preference number: 4 (lower is better)
Translates to: TVRKSQNQVVKRVGEAAGEQSSG*WHWRGH
Trigger: ATGGCCTCTCCAATGCCAGCAGCCGGAGGACTGCTC...CCCTGCTGCCTCCCCTACCCGTTTGACGACTTGGTTCTGGCTTTTTCTGACTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR GCA 90 bp GGGATGGAGGGGAGAGGAGTCTTTGCTACAGACAGGGCAGGCATAGGCGGCGCGTGGAGTTCCATGGCCTaGTGGATGTACATTTTCCCA +
Preference number: 4 (lower is better)
Translates to: GMEGRGVFATDRAGIGGAWSSMA*WMYIFP
Trigger: TGGGAAAATGTACATCCAGCAGGCCATGGAACTCCA...CGCGCCGCCTATGCCTGCCCTGTCTGTAGCAAAGACTCCTCTCCCCTCCATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR GCA 90 bp CTTACCTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCTGAACAGCCTCCACCAGTGCTTGGGTaGGGCTCACACACTTCTTCA +
Preference number: 4 (lower is better)
Translates to: LTSAEGPVSVSTLRSEQPPPVLG*GSHTSS
Trigger: TGAAGAAGTGTGTGAGCCGCACCCAAGCACTGGTGG...AGGCTGTTCAGACCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGGTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CCA 90 bp TCTTCTTGTTCGTCTCCGCACTGGTCTGCACGGACTCATTCTCCGGTTTGGCTTACTCGCAGTCCACAGTaGCCACGTCGGGCTTGGGAG +
Preference number: 4 (lower is better)
Translates to: SSCSSPHWSARTHSPVWLTRSPQ*PRRAWE
Trigger: CTCCCAAGCCCGACGTGGCCACTGTGGACTGCGAGT...AAGCCAAACCGGAGAATGAGTCCGTGCAGACCAGTGCGGAGACGAACAAGAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422503.6
CDS-3UTR CCA 90 bp GCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCTGAACAGCCTGGAAGGACGTGTTCGTCTCCGCACTaGTCTGCACGGACTCATTCT +
Preference number: 4 (lower is better)
Translates to: AEGPVSVSTLRSEQPGRTCSSPH*SARTHS
Trigger: AGAATGAGTCCGTGCAGACCAGTGCGGAGACGAACA...CGTCCTTCCAGGCTGTTCAGACCTCAGCGTTGACACTGAAACTGGCCCCTCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477737.6
CDS-3UTR CCA 90 bp GGGATGGAGGGGAGAGGAGTCTTTGCTACAGACAGGGCAGGCATAGGCGGCGCGTTGGTAATGTTGACGTaGACCAAGCTCCCATCCTTC +
Preference number: 4 (lower is better)
Translates to: GMEGRGVFATDRAGIGGALVMLT*TKLPSF
Trigger: GAAGGATGGGAGCTTGGTCCACGTCAACATTACCAA...CGCGCCGCCTATGCCTGCCCTGTCTGTAGCAAAGACTCCTCTCCCCTCCATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477737.6
CDS-3UTR CCA 90 bp ATGGAGGGGAGAGGAGTCTTTGCTACAGACAGGGCAGGCATAGGCGGCGCGGAGGTCCGCTTCTTTCAGTaGCCAGAAGAGGAAAGCAGA +
Preference number: 4 (lower is better)
Translates to: MEGRGVFATDRAGIGGAEVRFFQ*PEEESR
Trigger: TCTGCTTTCCTCTTCTGGCCACTGAAAGAAGCGGAC...CTCCGCGCCGCCTATGCCTGCCCTGTCTGTAGCAAAGACTCCTCTCCCCTCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CCA 90 bp TCCTCCGGCTGCTGGCATTGGAGAGGCCATCCTTCCTTTCACTGCAAGCTGAGCGGGCTTCTCTCGTCTTaGCTCTCTGGAATCCTGCGT +
Preference number: 4 (lower is better)
Translates to: SSGCWHWRGHPSFHCKLSGLLSS*LSGILR
Trigger: ACGCAGGATTCCAGAGAGCCAAGACGAGAGAAGCCC...GCTCAGCTTGCAGTGAAAGGAAGGATGGCCTCTCCAATGCCAGCAGCCGGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR CCA 90 bp CGGGGCCTTGTTTGCATAATTCTTCTTGGCAGCCTCCTGGAGTTCCATGGCCTGGCTGGAGTGGCTGCTTaGCGGGCCTCTTTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: RGLVCIILLGSLLEFHGLAGVAA*RASFSS
Trigger: GGAGGAAAAAGAGGCCCGCCAAGCAGCCACTCCAGC...CAGGCCATGGAACTCCAGGAGGCTGCCAAGAAGAATTATGCAAACAAGGCCCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR CCA 90 bp ACACATCTGAAGAATCGTGGTCATAAACCTGGCTTCCTTCTCGCGTCACCTTTTGAGGGCGCCGCCTGCTaGAGTGGCTGCTTGGCGGGC +
Preference number: 4 (lower is better)
Translates to: THLKNRGHKPGFLLASPFEGAAC*SGCLAG
Trigger: GCCCGCCAAGCAGCCACTCCAGCAGGCGGCGCCCTC...AAAAGGTGACGCGAGAAGGAAGCCAGGTTTATGACCACGATTCTTCAGATGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR CCA 90 bp AAGCCCACCAGTGCTTGGGTGCGGCTCACACACTTCTTCACAACCCCTGGAAAACAGGGCTGCTCGAGGTaGAGGTGTGGCAATGATGGC +
Preference number: 4 (lower is better)
Translates to: KPTSAWVRLTHFFTTPGKQGCSR*RCGNDG
Trigger: GCCATCATTGCCACACCTCCACCTCGAGCAGCCCTG...TTTTCCAGGGGTTGTGAAGAAGTGTGTGAGCCGCACCCAAGCACTGGTGGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR CCA 90 bp GGGATGGAGGGGAGAGGAGTCTTTGCTACAGACAGGGCAGGCATAGGCGGCGCGACAAGATTGCGGGCTTaGATCCTGACTATGCTGACT +
Preference number: 4 (lower is better)
Translates to: GMEGRGVFATDRAGIGGATRLRA*ILTMLT
Trigger: AGTCAGCATAGTCAGGATCCAAGCCCGCAATCTTGT...CGCGCCGCCTATGCCTGCCCTGTCTGTAGCAAAGACTCCTCTCCCCTCCATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
3UTR CAA 72 bp GATCTGGGCCAGCGTGCTGCAGGCTTCCTCCATCTCTaGCCAAACGAGAAACACGTCCTCTCTGACTCCAGC +
Preference number: 4 (lower is better)
Translates to: DLGQRAAGFLHL*PNEKHVLSDSS
Trigger: GCTGGAGTCAGAGAGGACGTGTTTCTCGTTTGGCAAGAGATGGAGGAAGCCTGCAGCACGCTGGCCCAGATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422503.6
ENST00000432242.5
3UTR CAA 72 bp GACCTTGGTGTCTCCGTAACTGAAGCCCACCAGTGCTaGGGTGCGGCTCACACACTTCTTCACAACCCCTGG +
Preference number: 4 (lower is better)
Translates to: DLGVSVTEAHQC*GAAHTLLHNPW
Trigger: CCAGGGGTTGTGAAGAAGTGTGTGAGCCGCACCCAAGCACTGGTGGGCTTCAGTTACGGAGACACCAAGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR TCA 90 bp TCTCCCGGCTTCCAGCAGAGCATCCAGGCGGCCAGCCTCGCTCACAGTCAGCTCATTTCTCAGATGAAATaGGACTCTGCTCAGCCAAGT +
Preference number: 4 (lower is better)
Translates to: SPGFQQSIQAASLAHSQLISQMK*DSAQPS
Trigger: ACTTGGCTGAGCAGAGTCTCATTTCATCTGAGAAAT...GAGCTGACTGTGAGCGAGGCTGGCCGCCTGGATGCTCTGCTGGAAGCCGGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422503.6
ENST00000432242.5
CDS-3UTR TCA 90 bp GCTCGGCCACCAGCCTCTGGATCTGGGCCAGCGTGCTGCAGGCTTCCTCCATCTCACTTCACAGGCTCTTaGGAAACCATTGTATACTCT +
Preference number: 4 (lower is better)
Translates to: ARPPASGSGPACCRLPPSHFTGS*ETIVYS
Trigger: AGAGTATACAATGGTTTCTCAAGAGCCTGTGAAGTG...AGATGGAGGAAGCCTGCAGCACGCTGGCCCAGATCCAGAGGCTGGTGGCCGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422503.6
CDS-3UTR TCA 90 bp ACAGTCAGAAAAAGCCAGAACCAAGTCGTCAAACGGGTAGGGGAGGCAGCAGGGTGGTGTCTCCGTAACTaGAGCCCACCAGTGCTTGGG +
Preference number: 4 (lower is better)
Translates to: TVRKSQNQVVKRVGEAAGWCLRN*SPPVLG
Trigger: CCCAAGCACTGGTGGGCTTCAGTTACGGAGACACCA...CCCTGCTGCCTCCCCTACCCGTTTGACGACTTGGTTCTGGCTTTTTCTGACTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR TCA 90 bp CGGGGCCTTGTTTGCATAATTCTTCTTGGCAGCCTCCTGGAGTTCCATGGCCTGTGGTGTCTCCGTAACTaGAGCCCACCAGTGCTTGGG +
Preference number: 4 (lower is better)
Translates to: RGLVCIILLGSLLEFHGLWCLRN*SPPVLG
Trigger: CCCAAGCACTGGTGGGCTTCAGTTACGGAGACACCA...CAGGCCATGGAACTCCAGGAGGCTGCCAAGAAGAATTATGCAAACAAGGCCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR TCA 90 bp GACTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCTGAACAGCCTGGAGGGGGTGACTTTATATaGGAGCAAGAGAGCGCATAC +
Preference number: 4 (lower is better)
Translates to: DSAEGPVSVSTLRSEQPGGGDFI*EQESAY
Trigger: GTATGCGCTCTCTTGCTCTCATATAAAGTCACCCCC...TCCAGGCTGTTCAGACCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000495571.5
ENST00000614454.1
CDS-3UTR TCA 90 bp TCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCTGAACAGCCTGGAAGGTTTCAGTGTCAACGCTaGGGTCTGAACAGCCTGGAA +
Preference number: 4 (lower is better)
Translates to: SAEGPVSVSTLRSEQPGRFQCQR*GLNSLE
Trigger: TTCCAGGCTGTTCAGACCTCAGCGTTGACACTGAAA...CCTTCCAGGCTGTTCAGACCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
ENST00000495571.5
ENST00000614454.1
CDS-3UTR GCA 90 bp GCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCTGAACAGCCTGGAAGGACGTTAATCCATCCCTCTTaGCTCTGCAGCTGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: AEGPVSVSTLRSEQPGRTLIHPS*LCSCCS
Trigger: TGAGCAGCAGCTGCAGAGGCAAGAGGGATGGATTAA...CGTCCTTCCAGGCTGTTCAGACCTCAGCGTTGACACTGAAACTGGCCCCTCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000477737.6
CDS-3UTR GCA 90 bp TCCGGTTTGGCTTTTATATCCACAACCCCATCAGCGTGGCGGAAAGAGCAGTCGGGATCTGGGCCAGCGTaGTGCAGGCTTCCTCCATCT +
Preference number: 4 (lower is better)
Translates to: SGLAFISTTPSAWRKEQSGSGPA*CRLPPS
Trigger: AGATGGAGGAAGCCTGCAGCACGCTGGCCCAGATCC...CGACTGCTCTTTCCGCCACGCTGATGGGGTTGTGGATATAAAAGCCAAACCGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000422503.6
ENST00000432242.5
ENST00000448638.5
CDS-3UTR GCA 90 bp GTCTTGTCTCTCCCGGCTTCCAGCAGAGCATCCAGGCGGCCAGCCTCGCTCACATCACCAAGTCCAGTTTaGTCTTCATTGAGTGAGACG +
Preference number: 4 (lower is better)
Translates to: VLSLPASSRASRRPASLTSPSPV*SSLSET
Trigger: CGTCTCACTCAATGAAGAGCAAACTGGACTTGGTGA...TGTGAGCGAGGCTGGCCGCCTGGATGCTCTGCTGGAAGCCGGGAGAGACAAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422503.6
ENST00000432242.5
CDS-3UTR GCA 90 bp GTCTTTGCTACAGACAGGGCAGGCATAGGCGGCGCGGAGGGCGGCCTTACCTCCGGTCAGAAGGTAGATTaGCTGTGTTTCTTTATCAGC +
Preference number: 4 (lower is better)
Translates to: VFATDRAGIGGAEGGLTSGQKVD*LCFFIS
Trigger: GCTGATAAAGAAACACAGGCAATCTACCTTCTGACC...GGAGGTAAGGCCGCCCTCCGCGCCGCCTATGCCTGCCCTGTCTGTAGCAAAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR GCA 90 bp GGAGGGCGGCCTTACCTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCGGTCAGAAGGTAGATTaGCTGTGTTTCTTTATCAGC +
Preference number: 4 (lower is better)
Translates to: GGRPYLRGGASFSVNAEVGQKVD*LCFFIS
Trigger: GCTGATAAAGAAACACAGGCAATCTACCTTCTGACC...GACCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGGTAAGGCCGCCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR GCA 90 bp GGGATGGAGGGGAGAGGAGTCTTTGCTACAGACAGGGCAGGCATAGGCGGCGCGGTCTCCATCCTTTTCTaGATTGTACCACCAGTCCAT +
Preference number: 4 (lower is better)
Translates to: GMEGRGVFATDRAGIGGAVSILF*IVPPVH
Trigger: ATGGACTGGTGGTACAATGCAGAAAAGGATGGAGAC...CGCGCCGCCTATGCCTGCCCTGTCTGTAGCAAAGACTCCTCTCCCCTCCATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
CDS-3UTR GCA 90 bp GGAGGGGAGAGGAGTCTTTGCTACAGACAGGGCAGGCATAGGCGGCGCGGAGGGCCTCAGCCAGCAAGATaGTCATTTCTTTGTCACTTA +
Preference number: 4 (lower is better)
Translates to: GGERSLCYRQGRHRRRGGPQPAR*SFLCHL
Trigger: TAAGTGACAAAGAAATGAGCATCTTGCTGGCTGAGG...CCCTCCGCGCCGCCTATGCCTGCCCTGTCTGTAGCAAAGACTCCTCTCCCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR GCA 90 bp GGAGGGGAGAGGAGTCTTTGCTACAGACAGGGCAGGCATAGGCGGCGCGGAGGGTTTTCTGTGGCCACATaGTTATTGGGAAGTGCTATG +
Preference number: 4 (lower is better)
Translates to: GGERSLCYRQGRHRRRGGFSVAT*LLGSAM
Trigger: CATAGCACTTCCCAATAAGCATGTGGCCACAGAAAA...CCCTCCGCGCCGCCTATGCCTGCCCTGTCTGTAGCAAAGACTCCTCTCCCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR GCA 90 bp GAGGGCGGCCTTACCTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCTTCTCTTAAACATAGCTaGCACCAGACGGCCTTAAAG +
Preference number: 4 (lower is better)
Translates to: EGGLTSAEGPVSVSTLRSSLKHS*HQTALK
Trigger: CTTTAAGGCCGTCTGGTGGCAGCTATGTTTAAGAGA...AGACCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGGTAAGGCCGCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR GCA 90 bp GACCTTAGACACGACATGCTTGTCCAGGACGGGAACATAGGTGGAGCTGTGCGGGGGGAGAGGAGTCTTTaGTACAGACAGGGCAGGCAT +
Preference number: 4 (lower is better)
Translates to: DLRHDMLVQDGNIGGAVRGERSL*YRQGRH
Trigger: ATGCCTGCCCTGTCTGTAGCAAAGACTCCTCTCCCC...CCGCACAGCTCCACCTATGTTCCCGTCCTGGACAAGCATGTCGTGTCTAAGGTC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000489630.5
CDS-3UTR CCA 90 bp TCAACAGAGGTTGTTTCTGACTCGCAGTCCACAGTGGCCACGTCGGGCTTGGGAGCGTGGAATCTGCTGTaGGTCTTGGCACTCAGATCC +
Preference number: 4 (lower is better)
Translates to: STEVVSDSQSTVATSGLGAWNLL*VLALRS
Trigger: GGATCTGAGTGCCAAGACCCACAGCAGATTCCACGC...TCCCAAGCCCGACGTGGCCACTGTGGACTGCGAGTCAGAAACAACCTCTGTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422503.6
ENST00000432242.5
CDS-3UTR CCA 90 bp AAAGAGTCAGATCTTCATTCTGAACAGCCTCTGGGGGAGTGGGATCCTTGCAACTCGGCCACCAGCCTCTaGATCTGGGCCAGCGTGCTG +
Preference number: 4 (lower is better)
Translates to: KESDLHSEQPLGEWDPCNSATSL*IWASVL
Trigger: CAGCACGCTGGCCCAGATCCAGAGGCTGGTGGCCGA...GTTGCAAGGATCCCACTCCCCCAGAGGCTGTTCAGAATGAAGATCTGACTCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000433678.5
ENST00000448638.5
CDS-3UTR CCA 90 bp ACACATCTGAAGAATCGTGGTCATAAACCTGGCTTCCTTCTCGCGTCACCTTTTTGGCCACGTCGGGCTTaGGAGGCTCGGCCACCAGCC +
Preference number: 4 (lower is better)
Translates to: THLKNRGHKPGFLLASPFWPRRA*EARPPA
Trigger: GGCTGGTGGCCGAGCCTCCCAAGCCCGACGTGGCCA...AAAAGGTGACGCGAGAAGGAAGCCAGGTTTATGACCACGATTCTTCAGATGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
CDS-3UTR CCA 90 bp CCACCAGTCCATGATCAAGGACTCAGAATAAAGGTCTTGCATCTTCTCCAGATCTGGCCACGTCGGGCTTaGGAGGCTCGGCCACCAGCC +
Preference number: 4 (lower is better)
Translates to: PPVHDQGLRIKVLHLLQIWPRRA*EARPPA
Trigger: GGCTGGTGGCCGAGCCTCCCAAGCCCGACGTGGCCA...GATCTGGAGAAGATGCAAGACCTTTATTCTGAGTCCTTGATCATGGACTGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000433678.5
ENST00000448638.5
CDS-3UTR CCA 90 bp GGCTTGGAGAGTACAGGGCAGGGCTGCTCGAGGTGGAGGTGTGGCAATGATGGCGTCCCAGGTGTCTTCTaGATTCGATGCAATCTCAAC +
Preference number: 4 (lower is better)
Translates to: GLESTGQGCSRWRCGNDGVPGVF*IRCNLN
Trigger: GTTGAGATTGCATCGAATCCAGAAGACACCTGGGAC...GCCATCATTGCCACACCTCCACCTCGAGCAGCCCTGCCCTGTACTCTCCAAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432242.5
CDS-3UTR CCA 90 bp ATAGTCTTGTCTCTCCCGGCTTCCAGCAGAGCATCCAGGCGGCCAGCCTCGCTCTTGGTAATGTTGACGTaGACCAAGCTCCCATCCTTC +
Preference number: 4 (lower is better)
Translates to: IVLSLPASSRASRRPASLLVMLT*TKLPSF
Trigger: GAAGGATGGGAGCTTGGTCCACGTCAACATTACCAA...GAGCGAGGCTGGCCGCCTGGATGCTCTGCTGGAAGCCGGGAGAGACAAGACTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422503.6
CDS-3UTR CCA 90 bp CACAACCCCATCAGCGTGGCGGAAAGAGCAGTCGGCAAGCACATCATACAAGGACGGGCCAGGGCTGTGTaGATTCTCTCACTGTACCAC +
Preference number: 4 (lower is better)
Translates to: HNPISVAERAVGKHIIQGRARAV*ILSLYH
Trigger: GTGGTACAGTGAGAGAATCCACACAGCCCTGGCCCG...TCCTTGTATGATGTGCTTGCCGACTGCTCTTTCCGCCACGCTGATGGGGTTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422503.6
CDS-3UTR CCA 90 bp GGGATGGAGGGGAGAGGAGTCTTTGCTACAGACAGGGCAGGCATAGGCGGCGCGTATAACTGTTTCAGGTaGCTGATCAGGTCTCCCATC +
Preference number: 4 (lower is better)
Translates to: GMEGRGVFATDRAGIGGAYNCFR*LIRSPI
Trigger: GATGGGAGACCTGATCAGCCACCTGAAACAGTTATA...CGCGCCGCCTATGCCTGCCCTGTCTGTAGCAAAGACTCCTCTCCCCTCCATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CCA 90 bp CTTACCTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCTGAACAGCCTCAGCCTCTGGGGGAGTaGGATCCTTGCAACCAAAAT +
Preference number: 4 (lower is better)
Translates to: LTSAEGPVSVSTLRSEQPQPLGE*DPCNQN
Trigger: ATTTTGGTTGCAAGGATCCCACTCCCCCAGAGGCTG...AGGCTGTTCAGACCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGGTAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CCA 90 bp ACCATTGTTAGAGCCTCTCGGCACAGATCAAGCTCCCCCTCCAGAATGCCGCCACTGAGGGAGGACATCTaGCTTCTGAGCAGGCTGGTT +
Preference number: 4 (lower is better)
Translates to: TIVRASRHRSSSPSRMPPLREDI*LLSRLV
Trigger: AACCAGCCTGCTCAGAAGCCAGATGTCCTCCCTCAG...TGGCGGCATTCTGGAGGGGGAGCTTGATCTGTGCCGAGAGGCTCTAACAATGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432242.5
CDS-3UTR CCA 90 bp CCCCACAGGCGTGATGAAGGAGGTGGACACGACCTTGGTGTCTCCGTAACTGAACTGAGGGAGGACATCTaGCTTCTGAGCAGGCTGGTT +
Preference number: 4 (lower is better)
Translates to: PHRRDEGGGHDLGVSVTELREDI*LLSRLV
Trigger: AACCAGCCTGCTCAGAAGCCAGATGTCCTCCCTCAG...TTCAGTTACGGAGACACCAAGGTCGTGTCCACCTCCTTCATCACGCCTGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR CCA 90 bp GGTCTGAACAGCCTGGAAGGACGCTGGTCTCTTAAACATAGCTGCCACCAGACGAAGCCCACCAGTGCTTaGGTGCGGCTCACACACTTC +
Preference number: 4 (lower is better)
Translates to: GLNSLEGRWSLKHSCHQTKPTSA*VRLTHF
Trigger: GAAGTGTGTGAGCCGCACCCAAGCACTGGTGGGCTT...CGTCTGGTGGCAGCTATGTTTAAGAGACCAGCGTCCTTCCAGGCTGTTCAGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
ENST00000495571.5
ENST00000614454.1
CDS-3UTR CCA 90 bp TCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCTGAACAGCCTGGAAGGGTCCGCTTCTTTCAGTaGCCAGAAGAGGAAAGCAGA +
Preference number: 4 (lower is better)
Translates to: SAEGPVSVSTLRSEQPGRVRFFQ*PEEESR
Trigger: TCTGCTTTCCTCTTCTGGCCACTGAAAGAAGCGGAC...CCTTCCAGGCTGTTCAGACCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
ENST00000495571.5
ENST00000614454.1
CDS-3UTR CCA 90 bp CTGGATCTGGGCCAGCGTGCTGCAGGCTTCCTCCATCTCTTGCCAAACGAGAAAGGGCTTCTCTCGTCTTaGCTCTCTGGAATCCTGCGT +
Preference number: 4 (lower is better)
Translates to: LDLGQRAAGFLHLLPNEKGLLSS*LSGILR
Trigger: ACGCAGGATTCCAGAGAGCCAAGACGAGAGAAGCCC...TTTCTCGTTTGGCAAGAGATGGAGGAAGCCTGCAGCACGCTGGCCCAGATCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432242.5
CDS-3UTR CCA 90 bp TTTATTCTGGTTTCGGGCTCAATTAGAGTTACCTACAACAGACTCCGCGGAGGGCGCCGCCTGCTGGAGTaGCTGCTTGGCGGGCCTCTT +
Preference number: 4 (lower is better)
Translates to: FILVSGSIRVTYNRLRGGRRLLE*LLGGPL
Trigger: AAGAGGCCCGCCAAGCAGCCACTCCAGCAGGCGGCG...CCCTCCGCGGAGTCTGTTGTAGGTAACTCTAATTGAGCCCGAAACCAGAATAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495571.5
ENST00000614454.1
CDS-3UTR CCA 90 bp CCACTCATGCTGTCTTCAGCTGTATGGAATGAAGGAAACAGCTCCAGAGCGAGATGGGAGCTGATGCCGTaGGAGGAGCCGTCCGAGTCC +
Preference number: 4 (lower is better)
Translates to: PLMLSSAVWNEGNSSRARWELMP*EEPSES
Trigger: GGACTCGGACGGCTCCTCCCACGGCATCAGCTCCCA...TCTCGCTCTGGAGCTGTTTCCTTCATTCCATACAGCTGAAGACAGCATGAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000495571.5
CDS-3UTR CCA 90 bp GCAATTTCTGTTGCTCTCCCGGGGCCTTGTTTGCATAATTCTTCTTGGCAGCCTCCCTGGCAGGACCCATaGGAGCTGATGCCGTGGGAG +
Preference number: 4 (lower is better)
Translates to: AISVALPGPCLHNSSWQPPWQDP*ELMPWE
Trigger: CTCCCACGGCATCAGCTCCCATGGGTCCTGCCAGGG...AGGCTGCCAAGAAGAATTATGCAAACAAGGCCCCGGGAGAGCAACAGAAATTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR CCA 90 bp TTGGCTGATCTTAATAAGTGCACTCCGAGGGCAAAATTCTCTCCGGTTGTTACACCGGCCGCGGGGAAGTaGAGGTGGGCTGTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: LADLNKCTPRAKFSPVVTPAAGK*RWAVLG
Trigger: GCCCAGGACAGCCCACCTCCACTTCCCCGCGGCCGG...TGTAACAACCGGAGAGAATTTTGCCCTCGGAGTGCACTTATTAAGATCAGCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR CCA 90 bp TTACCTACAACAGACTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCTGTGGCAATGATGGCGTaGCTGCTGAGTCCTAGACGC +
Preference number: 4 (lower is better)
Translates to: LPTTDSAEGPVSVSTLRSVAMMA*LLSPRR
Trigger: GCGTCTAGGACTCAGCAGCCACGCCATCATTGCCAC...AGACCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGTCTGTTGTAGGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495571.5
ENST00000614454.1
CDS-3UTR CCA 90 bp TTAGAGTTACCTACAACAGACTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGCAGGGCTGCTCGAGGTaGAGGTGTGGCAATGATGGC +
Preference number: 4 (lower is better)
Translates to: LELPTTDSAEGPVSVSTLQGCSR*RCGNDG
Trigger: GCCATCATTGCCACACCTCCACCTCGAGCAGCCCTG...CAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGTCTGTTGTAGGTAACTCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495571.5
ENST00000614454.1
CDS-3UTR CCA 90 bp AAGCCCACCAGTGCTTGGGTGCGGCTCACACACTTCTTCACAACCCCTGGAAAATGCCTGAACAGCCTCTaGGGGAGTGGGATCCTTGCA +
Preference number: 4 (lower is better)
Translates to: KPTSAWVRLTHFFTTPGKCLNSL*GSGILA
Trigger: TGCAAGGATCCCACTCCCCCAGAGGCTGTTCAGGCA...TTTTCCAGGGGTTGTGAAGAAGTGTGTGAGCCGCACCCAAGCACTGGTGGGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000489630.5
3UTR CAA 72 bp GTCTCCGCACTGGTCTGCACGGACTCATTCTCCGGTTaGGCTTTTATATCCACAACCCCATCAGCGTGGCGG +
Preference number: 4 (lower is better)
Translates to: VSALVCTDSFSG*AFISTTPSAWR
Trigger: CCGCCACGCTGATGGGGTTGTGGATATAAAAGCCAAACCGGAGAATGAGTCCGTGCAGACCAGTGCGGAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422503.6
3UTR CAA 72 bp TGGCGGGCCTCTTTTTCCTCCTGGGCTTCTCTCGTCTaGGCTCTCTGGAATCCTGCGTGTCCGCTTCTTTCA +
Preference number: 4 (lower is better)
Translates to: WRASFSSWASLV*ALWNPACPLLS
Trigger: TGAAAGAAGCGGACACGCAGGATTCCAGAGAGCCAAGACGAGAGAAGCCCAGGAGGAAAAAGAGGCCCGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR TCA 90 bp GATGAAGGAGGTGGACACGACCTTGGTGTCTCCGTAACTGAAGCCCACCAGTGCCGCACTGTTCCAAGATaGCACCAAAAATCTGCCGGC +
Preference number: 4 (lower is better)
Translates to: DEGGGHDLGVSVTEAHQCRTVPR*HQKSAG
Trigger: GCCGGCAGATTTTTGGTGTCATCTTGGAACAGTGCG...GCACTGGTGGGCTTCAGTTACGGAGACACCAAGGTCGTGTCCACCTCCTTCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432242.5
CDS-3UTR TCA 90 bp TCCGGTTTGGCTTTTATATCCACAACCCCATCAGCGTGGCGGAAAGAGCAGTCGGAAACACGTCCTCTCTaGCTCCAGCTCCTGGAGGGA +
Preference number: 4 (lower is better)
Translates to: SGLAFISTTPSAWRKEQSETRPL*LQLLEG
Trigger: TCCCTCCAGGAGCTGGAGTCAGAGAGGACGTGTTTC...CGACTGCTCTTTCCGCCACGCTGATGGGGTTGTGGATATAAAAGCCAAACCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000422503.6
ENST00000432242.5
CDS-3UTR TCA 90 bp TCTCCCGGCTTCCAGCAGAGCATCCAGGCGGCCAGCCTCGCTCACAGTCAGCTCAGTGAGACGTGTCAATaGGAATGTAGATGCAATCAT +
Preference number: 4 (lower is better)
Translates to: SPGFQQSIQAASLAHSQLSETCQ*ECRCNH
Trigger: ATGATTGCATCTACATTCTCATTGACACGTCTCACT...GAGCTGACTGTGAGCGAGGCTGGCCGCCTGGATGCTCTGCTGGAAGCCGGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422503.6
ENST00000432242.5
CDS-3UTR TCA 90 bp TCTTGTCTCTCCCGGCTTCCAGCAGAGCATCCAGGCGGCCAGCCTCGCTCACAGTTGCTCTTCATTGAGTaGGACGTGTCAATGAGAATG +
Preference number: 4 (lower is better)
Translates to: SCLSRLPAEHPGGQPRSQLLFIE*DVSMRM
Trigger: CATTCTCATTGACACGTCTCACTCAATGAAGAGCAA...CTGTGAGCGAGGCTGGCCGCCTGGATGCTCTGCTGGAAGCCGGGAGAGACAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422503.6
ENST00000432242.5
CDS-3UTR TCA 90 bp AGGAGTCTTTGCTACAGACAGGGCAGGCATAGGCGGCGCGGAGGGCGGCCTTACTTGCTCTTCATTGAGTaGGACGTGTCAATGAGAATG +
Preference number: 4 (lower is better)
Translates to: RSLCYRQGRHRRRGGRPYLLFIE*DVSMRM
Trigger: CATTCTCATTGACACGTCTCACTCAATGAAGAGCAA...GTAAGGCCGCCCTCCGCGCCGCCTATGCCTGCCCTGTCTGTAGCAAAGACTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000477737.6
CDS-3UTR TCA 90 bp GACCTTAGACACGACATGCTTGTCCAGGACGGGAACATAGGTGGAGCTGTGCGGGTCAGATCTTCATTCTaGACAGCCTCTGGGGGAGTG +
Preference number: 4 (lower is better)
Translates to: DLRHDMLVQDGNIGGAVRVRSSF*TASGGV
Trigger: CACTCCCCCAGAGGCTGTTCAGAATGAAGATCTGAC...CCGCACAGCTCCACCTATGTTCCCGTCCTGGACAAGCATGTCGTGTCTAAGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
ENST00000495571.5
CDS-3UTR TCA 90 bp TCAACAGAGGTTGTTTCTGACTCGCAGTCCACAGTGGCCACGTCGGGCTTGGGAGTCAGATCTTCATTCTaGACAGCCTCTGGGGGAGTG +
Preference number: 4 (lower is better)
Translates to: STEVVSDSQSTVATSGLGVRSSF*TASGGV
Trigger: CACTCCCCCAGAGGCTGTTCAGAATGAAGATCTGAC...TCCCAAGCCCGACGTGGCCACTGTGGACTGCGAGTCAGAAACAACCTCTGTTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432242.5
CDS-3UTR TCA 90 bp CAGGGCAGGGCTGCTCGAGGTGGAGGTGTGGCAATGATGGCGTGGCTGCTGAGTTGTACCACCAGTCCATaGTCAAGGACTCAGAATAAA +
Preference number: 4 (lower is better)
Translates to: QGRAARGGGVAMMAWLLSCTTSP*SRTQNK
Trigger: TTTATTCTGAGTCCTTGATCATGGACTGGTGGTACA...ACTCAGCAGCCACGCCATCATTGCCACACCTCCACCTCGAGCAGCCCTGCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000495571.5
CDS-3UTR TCA 90 bp CGGGGCCTTGTTTGCATAATTCTTCTTGGCAGCCTCCTGGAGTTCCATGGCCTGCCTTTCACTGCAAGCTaGGCTCCTGAGGGAGGACAT +
Preference number: 4 (lower is better)
Translates to: RGLVCIILLGSLLEFHGLPFTAS*APEGGH
Trigger: ATGTCCTCCCTCAGGAGCTCAGCTTGCAGTGAAAGG...CAGGCCATGGAACTCCAGGAGGCTGCCAAGAAGAATTATGCAAACAAGGCCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR TCA 90 bp CAACAGAGGTTGTTTCTGACTCGCAGTCCACAGTGGCCACGTCGGGCTTGGGAGTCTGTGGCTCAGAACTaGTACTCCCTCCTTAAACGG +
Preference number: 4 (lower is better)
Translates to: QQRLFLTRSPQWPRRAWESVAQN*YSLLKR
Trigger: CCGTTTAAGGAGGGAGTATCAGTTCTGAGCCACAGA...CTCCCAAGCCCGACGTGGCCACTGTGGACTGCGAGTCAGAAACAACCTCTGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422503.6
ENST00000432242.5
CDS-3UTR TCA 90 bp ACAGACTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCTGAACAGCCTTCTGTGGCTCAGAACTaGTACTCCCTCCTTAAACGG +
Preference number: 4 (lower is better)
Translates to: TDSAEGPVSVSTLRSEQPSVAQN*YSLLKR
Trigger: CCGTTTAAGGAGGGAGTATCAGTTCTGAGCCACAGA...AGGCTGTTCAGACCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495571.5
CDS-3UTR TCA 90 bp AGACACGACATGCTTGTCCAGGACGGGAACATAGGTGGAGCTGTGCGGGACTGCGGGGGTGACTTTATATaGGAGCAAGAGAGCGCATAC +
Preference number: 4 (lower is better)
Translates to: RHDMLVQDGNIGGAVRDCGGDFI*EQESAY
Trigger: GTATGCGCTCTCTTGCTCTCATATAAAGTCACCCCC...GCAGTCCCGCACAGCTCCACCTATGTTCCCGTCCTGGACAAGCATGTCGTGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR GCA 90 bp TCCTCCGGCTGCTGGCATTGGAGAGGCCATCCTTCCTTTCACTGCAAGCTGAGCTGCCTCTGCAGCTGCTaGTCAGAGATGGTAGAAGAT +
Preference number: 4 (lower is better)
Translates to: SSGCWHWRGHPSFHCKLSCLCSC*SEMVED
Trigger: ATCTTCTACCATCTCTGAGCAGCAGCTGCAGAGGCA...GCTCAGCTTGCAGTGAAAGGAAGGATGGCCTCTCCAATGCCAGCAGCCGGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
CDS-3UTR GCA 90 bp CTCTGGATCTGGGCCAGCGTGCTGCAGGCTTCCTCCATCTCTTGCCAAACGAGATGCCTCTGCAGCTGCTaGTCAGAGATGGTAGAAGAT +
Preference number: 4 (lower is better)
Translates to: LWIWASVLQASSISCQTRCLCSC*SEMVED
Trigger: ATCTTCTACCATCTCTGAGCAGCAGCTGCAGAGGCA...TCTCGTTTGGCAAGAGATGGAGGAAGCCTGCAGCACGCTGGCCCAGATCCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422503.6
ENST00000432242.5
CDS-3UTR GCA 90 bp GTCTTGTCTCTCCCGGCTTCCAGCAGAGCATCCAGGCGGCCAGCCTCGCTCACATTCAAGCCATATTTCTaGAGCCATGTCTTAGAGTCC +
Preference number: 4 (lower is better)
Translates to: VLSLPASSRASRRPASLTFKPYF*SHVLES
Trigger: GGACTCTAAGACATGGCTGCAGAAATATGGCTTGAA...TGTGAGCGAGGCTGGCCGCCTGGATGCTCTGCTGGAAGCCGGGAGAGACAAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422503.6
ENST00000432242.5
CDS-3UTR GCA 90 bp AGTCAGAAAAAGCCAGAACCAAGTCGTCAAACGGGTAGGGGAGGCAGCAGGGATGTCTCCGCACTGGTCTaGACGGACTCATTCTCCGGT +
Preference number: 4 (lower is better)
Translates to: SQKKPEPSRQTGRGGSRDVSALV*TDSFSG
Trigger: ACCGGAGAATGAGTCCGTGCAGACCAGTGCGGAGAC...ATCCCTGCTGCCTCCCCTACCCGTTTGACGACTTGGTTCTGGCTTTTTCTGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477737.6
CDS-3UTR GCA 90 bp GTCTTGTCTCTCCCGGCTTCCAGCAGAGCATCCAGGCGGCCAGCCTCGCTCACAGGTCAGAAGGTAGATTaGCTGTGTTTCTTTATCAGC +
Preference number: 4 (lower is better)
Translates to: VLSLPASSRASRRPASLTGQKVD*LCFFIS
Trigger: GCTGATAAAGAAACACAGGCAATCTACCTTCTGACC...TGTGAGCGAGGCTGGCCGCCTGGATGCTCTGCTGGAAGCCGGGAGAGACAAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422503.6
ENST00000432242.5
CDS-3UTR GCA 90 bp CATAGCTGCCACCAGACGGCCTTAAAGTGTCTCAGGGACGCTCCTCAGCCCTTTGTCGTTGCACACATGTaGCAGAGGGAACACCTCATC +
Preference number: 4 (lower is better)
Translates to: HSCHQTALKCLRDAPQPFVVAHM*QREHLI
Trigger: GATGAGGTGTTCCCTCTGGCACATGTGTGCAACGAC...AAAGGGCTGAGGAGCGTCCCTGAGACACTTTAAGGCCGTCTGGTGGCAGCTATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR GCA 90 bp TTGGCAGCCTCCTGGAGTTCCATGGCCTGCTGGATGTACATTTTCCCAGCTAGGCCACCAGTGCTTGGGTaGGGCTCACACACTTCTTCA +
Preference number: 4 (lower is better)
Translates to: LAASWSSMACWMYIFPARPPVLG*GSHTSS
Trigger: TGAAGAAGTGTGTGAGCCGCACCCAAGCACTGGTGG...CCTAGCTGGGAAAATGTACATCCAGCAGGCCATGGAACTCCAGGAGGCTGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR GCA 90 bp ATTTCTGTTGCTCTCCCGGGGCCTTGTTTGCATAATTCTTCTTGGCAGCCTCCTAGTACAGGGCAGGGCTaGTCGAGGTGGAGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: ISVALPGPCLHNSSWQPPSTGQG*SRWRCG
Trigger: GCCACACCTCCACCTCGAGCAGCCCTGCCCTGTACT...AGGAGGCTGCCAAGAAGAATTATGCAAACAAGGCCCCGGGAGAGCAACAGAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR CCA 90 bp TTGTCATCCAGCCACTCCTCAGCCAGCAAGATGCTCATTTCTTTGTCACTTAGAGTCGGGTGGAAGACGTaGCGGCTCCCGCTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: LSSSHSSASKMLISLSLRVGWKT*RLPLSS
Trigger: GCTGCTGAGCGGGAGCCGCCACGTCTTCCACCCGAC...TCTAAGTGACAAAGAAATGAGCATCTTGCTGGCTGAGGAGTGGCTGGATGACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
CDS-3UTR CCA 90 bp TATTTCTGCAGCCATGTCTTAGAGTCCCAGGTGTCTTCTGGATTCGATGCAATCGTCGGGTGGAAGACGTaGCGGCTCCCGCTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: YFCSHVLESQVSSGFDAIVGWKT*RLPLSS
Trigger: GCTGCTGAGCGGGAGCCGCCACGTCTTCCACCCGAC...GATTGCATCGAATCCAGAAGACACCTGGGACTCTAAGACATGGCTGCAGAAATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422503.6
ENST00000432242.5
CDS-3UTR CCA 90 bp CCACCAGTCCATGATCAAGGACTCAGAATAAAGGTCTTGCATCTTCTCCAGATCGTCGGGTGGAAGACGTaGCGGCTCCCGCTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: PPVHDQGLRIKVLHLLQIVGWKT*RLPLSS
Trigger: GCTGCTGAGCGGGAGCCGCCACGTCTTCCACCCGAC...GATCTGGAGAAGATGCAAGACCTTTATTCTGAGTCCTTGATCATGGACTGGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000433678.5
ENST00000448638.5
CDS-3UTR CCA 90 bp GCTGTATGGAATGAAGGAAACAGCTCCAGAGCGAGAGACTTGGGCTTGAAGCTCAGGCAATATGTCGGGTaGAAGACGTGGCGGCTCCCG +
Preference number: 4 (lower is better)
Translates to: AVWNEGNSSRARDLGLKLRQYVG*KTWRLP
Trigger: CGGGAGCCGCCACGTCTTCCACCCGACATATTGCCT...GAGCTTCAAGCCCAAGTCTCTCGCTCTGGAGCTGTTTCCTTCATTCCATACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422503.6
ENST00000432242.5
ENST00000433678.5
CDS-3UTR CCA 90 bp TTGGCAGCCTCCTGGAGTTCCATGGCCTGCTGGATGTACATTTTCCCAGCTAGGGCGTGGAATCTGCTGTaGGTCTTGGCACTCAGATCC +
Preference number: 4 (lower is better)
Translates to: LAASWSSMACWMYIFPARAWNLL*VLALRS
Trigger: GGATCTGAGTGCCAAGACCCACAGCAGATTCCACGC...CCTAGCTGGGAAAATGTACATCCAGCAGGCCATGGAACTCCAGGAGGCTGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432242.5
CDS-3UTR CCA 90 bp AAAGAGTCAGATCTTCATTCTGAACAGCCTCTGGGGGAGTGGGATCCTTGCAACACTCGCAGTCCACAGTaGCCACGTCGGGCTTGGGAG +
Preference number: 4 (lower is better)
Translates to: KESDLHSEQPLGEWDPCNTRSPQ*PRRAWE
Trigger: CTCCCAAGCCCGACGTGGCCACTGTGGACTGCGAGT...GTTGCAAGGATCCCACTCCCCCAGAGGCTGTTCAGAATGAAGATCTGACTCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000433678.5
ENST00000448638.5
CDS-3UTR CCA 90 bp CCTACAACAGACTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCTGAACAGCCTCTGGGGGAGTaGGATCCTTGCAACCAAAAT +
Preference number: 4 (lower is better)
Translates to: PTTDSAEGPVSVSTLRSEQPLGE*DPCNQN
Trigger: ATTTTGGTTGCAAGGATCCCACTCCCCCAGAGGCTG...TTCAGACCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGTCTGTTGTAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000495571.5
CDS-3UTR CCA 90 bp ACAGTCAGAAAAAGCCAGAACCAAGTCGTCAAACGGGTAGGGGAGGCAGCAGGGTCCGGCTGCTGGCATTaGAGAGGCCATCCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: TVRKSQNQVVKRVGEAAGSGCWH*RGHPSF
Trigger: AAAGGAAGGATGGCCTCTCCAATGCCAGCAGCCGGA...CCCTGCTGCCTCCCCTACCCGTTTGACGACTTGGTTCTGGCTTTTTCTGACTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CCA 90 bp TTACCTACAACAGACTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCTTCCGGCTGCTGGCATTaGAGAGGCCATCCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: LPTTDSAEGPVSVSTLRSSGCWH*RGHPSF
Trigger: AAAGGAAGGATGGCCTCTCCAATGCCAGCAGCCGGA...AGACCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGTCTGTTGTAGGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495571.5
CDS-3UTR CCA 90 bp TATATCCACAACCCCATCAGCGTGGCGGAAAGAGCAGTCGGCAAGCACATCATACAGTCCTCCGGCTGCTaGCATTGGAGAGGCCATCCT +
Preference number: 4 (lower is better)
Translates to: YIHNPISVAERAVGKHIIQSSGC*HWRGHP
Trigger: AGGATGGCCTCTCCAATGCCAGCAGCCGGAGGACTG...TATGATGTGCTTGCCGACTGCTCTTTCCGCCACGCTGATGGGGTTGTGGATATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
CDS-3UTR CCA 90 bp TTATATCCACAACCCCATCAGCGTGGCGGAAAGAGCAGTCGGCAAGCACATCATGGACGGGAACATAGGTaGAGCTGTGCGGGACTGCTG +
Preference number: 4 (lower is better)
Translates to: LYPQPHQRGGKSSRQAHHGREHR*SCAGLL
Trigger: CAGCAGTCCCGCACAGCTCCACCTATGTTCCCGTCC...ATGATGTGCTTGCCGACTGCTCTTTCCGCCACGCTGATGGGGTTGTGGATATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
CDS-3UTR CCA 90 bp GGAGGGCGGCCTTACCTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCTTGAGTTTGGCTCCTTaGGGGTTAATTAATGTCATC +
Preference number: 4 (lower is better)
Translates to: GGRPYLRGGASFSVNAEVLSLAP*GLINVI
Trigger: GATGACATTAATTAACCCCCAAGGAGCCAAACTCAA...GACCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGGTAAGGCCGCCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CCA 90 bp TCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCTGAACAGCCTGGAAGGAGTTCCATGGCCTGCTaGATGTACATTTTCCCAGCT +
Preference number: 4 (lower is better)
Translates to: SAEGPVSVSTLRSEQPGRSSMAC*MYIFPA
Trigger: AGCTGGGAAAATGTACATCCAGCAGGCCATGGAACT...CCTTCCAGGCTGTTCAGACCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
ENST00000495571.5
ENST00000614454.1
CDS-3UTR CCA 90 bp GCGGAGGGCGGCCTTACCTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTGTAGAATTTTTCTGTaGCCACATGCTTATTGGGAA +
Preference number: 4 (lower is better)
Translates to: AEGGLTSAEGPVSVSTLRCRIFL*PHAYWE
Trigger: TTCCCAATAAGCATGTGGCCACAGAAAAATTCTACA...CCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGGTAAGGCCGCCCTCCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CCA 90 bp CTTCTCTCGTCTTGGCTCTCTGGAATCCTGCGTGTCCGCTTCTTTCAGTGGCCACTCGTCTTGGCTCTCTaGAATCCTGCGTGTCCGCTT +
Preference number: 4 (lower is better)
Translates to: LLSSWLSGILRVRFFQWPLVLAL*NPACPL
Trigger: AAGCGGACACGCAGGATTCCAGAGAGCCAAGACGAG...TGGCCACTGAAAGAAGCGGACACGCAGGATTCCAGAGAGCCAAGACGAGAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR CCA 90 bp AAGACACATCTGAAGAATCGTGGTCATAAACCTGGCTTCCTTCTCGCGTCACCTTCGGGGTGTGTCCCCTaGCAGGACCCATGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: KTHLKNRGHKPGFLLASPSGCVP*QDPWEL
Trigger: CAGCTCCCATGGGTCCTGCCAGGGGACACACCCCGA...AGGTGACGCGAGAAGGAAGCCAGGTTTATGACCACGATTCTTCAGATGTGTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR CCA 90 bp CCAGAAGAGGAAAGCAGAGTTCCTCGCCTCCACATCCTCTACTTCTGGATCCTCGTGGCAATGATGGCGTaGCTGCTGAGTCCTAGACGC +
Preference number: 4 (lower is better)
Translates to: PEEESRVPRLHILYFWILVAMMA*LLSPRR
Trigger: GCGTCTAGGACTCAGCAGCCACGCCATCATTGCCAC...GAGGATCCAGAAGTAGAGGATGTGGAGGCGAGGAACTCTGCTTTCCTCTTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR CCA 90 bp TTTCGGGCTCAATTAGAGTTACCTACAACAGACTCCGCGGAGGGGCCAGTTTCACTGCTGTGGGTGGCTTaGAGAGTACAGGGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: FRAQLELPTTDSAEGPVSLLWVA*RVQGRA
Trigger: AGCCCTGCCCTGTACTCTCCAAGCCACCCACAGCAG...TGAAACTGGCCCCTCCGCGGAGTCTGTTGTAGGTAACTCTAATTGAGCCCGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495571.5
ENST00000614454.1
CDS-3UTR CCA 90 bp AGACACGACATGCTTGTCCAGGACGGGAACATAGGTGGAGCTGTGCGGGACTGCAGCCTGGAAGGACGCTaGTCTCTTAAACATAGCTGC +
Preference number: 4 (lower is better)
Translates to: RHDMLVQDGNIGGAVRDCSLEGR*SLKHSC
Trigger: GCAGCTATGTTTAAGAGACCAGCGTCCTTCCAGGCT...GCAGTCCCGCACAGCTCCACCTATGTTCCCGTCCTGGACAAGCATGTCGTGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR CCA 90 bp CTTACCTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCTGAACAGCCTAGCCTGGAAGGACGCTaGTCTCTTAAACATAGCTGC +
Preference number: 4 (lower is better)
Translates to: LTSAEGPVSVSTLRSEQPSLEGR*SLKHSC
Trigger: GCAGCTATGTTTAAGAGACCAGCGTCCTTCCAGGCT...AGGCTGTTCAGACCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGGTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
3UTR CAA 72 bp ACTCGGTTATGTGAGCCACCTGCTCCTGGAGAACCATaGTTAGAGCCTCTCGGCACAGATCAAGCTCCCCCT +
Preference number: 4 (lower is better)
Translates to: TRLCEPPAPGEP*LEPLGTDQAPP
Trigger: AGGGGGAGCTTGATCTGTGCCGAGAGGCTCTAACAATGGTTCTCCAGGAGCAGGTGGCTCACATAACCGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432242.5
CDS-3UTR TCA 90 bp TCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCTGAACAGCCTGGAAGGCAGTTTGCTCTTCATTaGGTGAGACGTGTCAATGAG +
Preference number: 4 (lower is better)
Translates to: SAEGPVSVSTLRSEQPGRQFALH*VRRVNE
Trigger: CTCATTGACACGTCTCACTCAATGAAGAGCAAACTG...CCTTCCAGGCTGTTCAGACCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000477737.6
CDS-3UTR TCA 90 bp TTGGAGAGTACAGGGCAGGGCTGCTCGAGGTGGAGGTGTGGCAATGATGGCGTGTTCTCCAGATCACTGTaGCCCTGTTCCATTTCCTTA +
Preference number: 4 (lower is better)
Translates to: LESTGQGCSRWRCGNDGVFSRSL*PCSISL
Trigger: TAAGGAAATGGAACAGGGTCACAGTGATCTGGAGAA...CACGCCATCATTGCCACACCTCCACCTCGAGCAGCCCTGCCCTGTACTCTCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000495571.5
CDS-3UTR TCA 90 bp ATGGAGGGGAGAGGAGTCTTTGCTACAGACAGGGCAGGCATAGGCGGCGCGGAGTGTACCACCAGTCCATaGTCAAGGACTCAGAATAAA +
Preference number: 4 (lower is better)
Translates to: MEGRGVFATDRAGIGGAECTTSP*SRTQNK
Trigger: TTTATTCTGAGTCCTTGATCATGGACTGGTGGTACA...CTCCGCGCCGCCTATGCCTGCCCTGTCTGTAGCAAAGACTCCTCTCCCCTCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
CDS-3UTR TCA 90 bp AGTCAGAAAAAGCCAGAACCAAGTCGTCAAACGGGTAGGGGAGGCAGCAGGGATCCTTTCACTGCAAGCTaGGCTCCTGAGGGAGGACAT +
Preference number: 4 (lower is better)
Translates to: SQKKPEPSRQTGRGGSRDPFTAS*APEGGH
Trigger: ATGTCCTCCCTCAGGAGCTCAGCTTGCAGTGAAAGG...ATCCCTGCTGCCTCCCCTACCCGTTTGACGACTTGGTTCTGGCTTTTTCTGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR TCA 90 bp GTCTTTGCTACAGACAGGGCAGGCATAGGCGGCGCGGAGGGCGGCCTTACCTCCTTTTCTTTTTCCTCTTaGGATAATGCTCGCCAAACA +
Preference number: 4 (lower is better)
Translates to: VFATDRAGIGGAEGGLTSFSFSS*DNARQT
Trigger: TGTTTGGCGAGCATTATCTCAAGAGGAAAAAGAAAA...GGAGGTAAGGCCGCCCTCCGCGCCGCCTATGCCTGCCCTGTCTGTAGCAAAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR TCA 90 bp GCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCTGAACAGCCTGGAAGGACGCTCAGGAATTGGGGGTaGCTTTATATGAGAGCAAGA +
Preference number: 4 (lower is better)
Translates to: AEGPVSVSTLRSEQPGRTLRNWG*LYMRAR
Trigger: TCTTGCTCTCATATAAAGTCACCCCCAATTCCTGAG...CGTCCTTCCAGGCTGTTCAGACCTCAGCGTTGACACTGAAACTGGCCCCTCCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
ENST00000495571.5
ENST00000614454.1
CDS-3UTR TCA 90 bp GACTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCTGAACAGCCTGGACTCAGGAATTGGGGGTaGCTTTATATGAGAGCAAGA +
Preference number: 4 (lower is better)
Translates to: DSAEGPVSVSTLRSEQPGLRNWG*LYMRAR
Trigger: TCTTGCTCTCATATAAAGTCACCCCCAATTCCTGAG...TCCAGGCTGTTCAGACCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000495571.5
ENST00000614454.1
CDS-3UTR TCA 90 bp CTTACCTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCTGAACAGCCTAACAGGCCCAGAATCTaGAGGACGATGTTAGGTGTA +
Preference number: 4 (lower is better)
Translates to: LTSAEGPVSVSTLRSEQPNRPRI*RTMLGV
Trigger: TACACCTAACATCGTCCTTCAGATTCTGGGCCTGTT...AGGCTGTTCAGACCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGGTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473149.5
CDS-3UTR GCA 90 bp ACAACCCCATCAGCGTGGCGGAAAGAGCAGTCGGCAAGCACATCATACAAGGATCATCCCTCTTGCCTCTaGAGCTGCTGCTCAGAGATG +
Preference number: 4 (lower is better)
Translates to: TTPSAWRKEQSASTSYKDHPSCL*SCCSEM
Trigger: CATCTCTGAGCAGCAGCTGCAGAGGCAAGAGGGATG...ATCCTTGTATGATGTGCTTGCCGACTGCTCTTTCCGCCACGCTGATGGGGTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000422503.6
ENST00000432242.5
ENST00000448638.5
CDS-3UTR GCA 90 bp ACAACCCCATCAGCGTGGCGGAAAGAGCAGTCGGCAAGCACATCATACAAGGATGCTCCCCCTCCAGAATaGCGCCAAAATCCAGCACTA +
Preference number: 4 (lower is better)
Translates to: TTPSAWRKEQSASTSYKDAPPPE*RQNPAL
Trigger: TAGTGCTGGATTTTGGCGGCATTCTGGAGGGGGAGC...ATCCTTGTATGATGTGCTTGCCGACTGCTCTTTCCGCCACGCTGATGGGGTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
CDS-3UTR GCA 90 bp TTGGAGAGTACAGGGCAGGGCTGCTCGAGGTGGAGGTGTGGCAATGATGGCGTGTCTTATTTGTGTCGTTaGACACATGTGCCAGAGGGA +
Preference number: 4 (lower is better)
Translates to: LESTGQGCSRWRCGNDGVSYLCR*THVPEG
Trigger: TCCCTCTGGCACATGTGTGCAACGACACAAATAAGA...CACGCCATCATTGCCACACCTCCACCTCGAGCAGCCCTGCCCTGTACTCTCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR GCA 90 bp ATGGAGGGGAGAGGAGTCTTTGCTACAGACAGGGCAGGCATAGGCGGCGCGGAGGCTGATCTTAATAAGTaGACTCCGAGGGCAAAATTC +
Preference number: 4 (lower is better)
Translates to: MEGRGVFATDRAGIGGAEADLNK*TPRAKF
Trigger: GAATTTTGCCCTCGGAGTGCACTTATTAAGATCAGC...CTCCGCGCCGCCTATGCCTGCCCTGTCTGTAGCAAAGACTCCTCTCCCCTCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR GCA 90 bp AAGCCCACCAGTGCTTGGGTGCGGCTCACACACTTCTTCACAACCCCTGGAAAAGGCTCTCTGGAATCCTaGGTGTCCGCTTCTTTCAGT +
Preference number: 4 (lower is better)
Translates to: KPTSAWVRLTHFFTTPGKGSLES*VSASFS
Trigger: ACTGAAAGAAGCGGACACGCAGGATTCCAGAGAGCC...TTTTCCAGGGGTTGTGAAGAAGTGTGTGAGCCGCACCCAAGCACTGGTGGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR GCA 90 bp TTTATTCTGGTTTCGGGCTCAATTAGAGTTACCTACAACAGACTCCGCGGAGGGAGTACAGGGCAGGGCTaGTCGAGGTGGAGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: FILVSGSIRVTYNRLRGGSTGQG*SRWRCG
Trigger: GCCACACCTCCACCTCGAGCAGCCCTGCCCTGTACT...CCCTCCGCGGAGTCTGTTGTAGGTAACTCTAATTGAGCCCGAAACCAGAATAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495571.5
ENST00000614454.1
CDS-3UTR GCA 90 bp GCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCTGAACAGCCTGGAAGGACGTCTCTTAAACATAGCTaGCACCAGACGGCCTTAAAG +
Preference number: 4 (lower is better)
Translates to: AEGPVSVSTLRSEQPGRTSLKHS*HQTALK
Trigger: CTTTAAGGCCGTCTGGTGGCAGCTATGTTTAAGAGA...CGTCCTTCCAGGCTGTTCAGACCTCAGCGTTGACACTGAAACTGGCCCCTCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
ENST00000495571.5
ENST00000614454.1
CDS-3UTR CCA 90 bp CTGTACCACTTGCACTTCTCTTTGGTAATGTTGACGTGGACCAAGCTCCCATCCAGGCAATATGTCGGGTaGAAGACGTGGCGGCTCCCG +
Preference number: 4 (lower is better)
Translates to: LYHLHFSLVMLTWTKLPSRQYVG*KTWRLP
Trigger: CGGGAGCCGCCACGTCTTCCACCCGACATATTGCCT...GGATGGGAGCTTGGTCCACGTCAACATTACCAAAGAGAAGTGCAAGTGGTACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422503.6
CDS-3UTR CCA 90 bp CCCATGGTCCCTTCAACATATTCAGAGATGAAGTTTGTGTTGAATCGACATCAGTGGCCACGTCGGGCTTaGGAGGCTCGGCCACCAGCC +
Preference number: 4 (lower is better)
Translates to: PMVPSTYSEMKFVLNRHQWPRRA*EARPPA
Trigger: GGCTGGTGGCCGAGCCTCCCAAGCCCGACGTGGCCA...CTGATGTCGATTCAACACAAACTTCATCTCTGAATATGTTGAAGGGACCATGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
CDS-3UTR CCA 90 bp AAGCCCACCAGTGCTTGGGTGCGGCTCACACACTTCTTCACAACCCCTGGAAAAATTCTGAACAGCCTCTaGGGGAGTGGGATCCTTGCA +
Preference number: 4 (lower is better)
Translates to: KPTSAWVRLTHFFTTPGKILNSL*GSGILA
Trigger: TGCAAGGATCCCACTCCCCCAGAGGCTGTTCAGAAT...TTTTCCAGGGGTTGTGAAGAAGTGTGTGAGCCGCACCCAAGCACTGGTGGGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000495571.5
CDS-3UTR CCA 90 bp TCCGGTTTGGCTTTTATATCCACAACCCCATCAGCGTGGCGGAAAGAGCAGTCGTCCGGCTGCTGGCATTaGAGAGGCCATCCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: SGLAFISTTPSAWRKEQSSGCWH*RGHPSF
Trigger: AAAGGAAGGATGGCCTCTCCAATGCCAGCAGCCGGA...CGACTGCTCTTTCCGCCACGCTGATGGGGTTGTGGATATAAAAGCCAAACCGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
CDS-3UTR CCA 90 bp TTGGCTTTTATATCCACAACCCCATCAGCGTGGCGGAAAGAGCAGTCGGCAAGCTCCGGCTGCTGGCATTaGAGAGGCCATCCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: LAFISTTPSAWRKEQSASSGCWH*RGHPSF
Trigger: AAAGGAAGGATGGCCTCTCCAATGCCAGCAGCCGGA...GCTTGCCGACTGCTCTTTCCGCCACGCTGATGGGGTTGTGGATATAAAAGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
CDS-3UTR CCA 90 bp GTTTCGGGCTCAATTAGAGTTACCTACAACAGACTCCGCGGAGGGGCCAGTTTCGGGCTTCTCTCGTCTTaGCTCTCTGGAATCCTGCGT +
Preference number: 4 (lower is better)
Translates to: VSGSIRVTYNRLRGGASFGLLSS*LSGILR
Trigger: ACGCAGGATTCCAGAGAGCCAAGACGAGAGAAGCCC...GAAACTGGCCCCTCCGCGGAGTCTGTTGTAGGTAACTCTAATTGAGCCCGAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495571.5
ENST00000614454.1
CDS-3UTR CCA 90 bp GAAAGGCCCCATGGTCCCTTCAACATATTCAGAGATGAAGTTTGTGTTGAATCGGGAGGTGGGCTGTCCTaGGCTCGGGGTGTGTCCCCT +
Preference number: 4 (lower is better)
Translates to: ERPHGPFNIFRDEVCVESGGGLS*ARGVSP
Trigger: AGGGGACACACCCCGAGCCCAGGACAGCCCACCTCC...CGATTCAACACAAACTTCATCTCTGAATATGTTGAAGGGACCATGGGGCCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR CCA 90 bp TTAATGTCATCTTATTTGTGTCGTTGCACACATGTGCCAGAGGGAACACCTCATGCGGGGAAGTGGAGGTaGGCTGTCCTGGGCTCGGGG +
Preference number: 4 (lower is better)
Translates to: LMSSYLCRCTHVPEGTPHAGKWR*AVLGSG
Trigger: CCCCGAGCCCAGGACAGCCCACCTCCACTTCCCCGC...ATGAGGTGTTCCCTCTGGCACATGTGTGCAACGACACAAATAAGATGACATTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR CCA 90 bp AAAGAGTCAGATCTTCATTCTGAACAGCCTCTGGGGGAGTGGGATCCTTGCAACCAGGGCTGCTCGAGGTaGAGGTGTGGCAATGATGGC +
Preference number: 4 (lower is better)
Translates to: KESDLHSEQPLGEWDPCNQGCSR*RCGNDG
Trigger: GCCATCATTGCCACACCTCCACCTCGAGCAGCCCTG...GTTGCAAGGATCCCACTCCCCCAGAGGCTGTTCAGAATGAAGATCTGACTCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000495571.5
CDS-3UTR CCA 90 bp CCAGAAGAGGAAAGCAGAGTTCCTCGCCTCCACATCCTCTACTTCTGGATCCTCCTTTGCTGCTGTGGGTaGCTTGGAGAGTACAGGGCA +
Preference number: 4 (lower is better)
Translates to: PEEESRVPRLHILYFWILLCCCG*LGEYRA
Trigger: TGCCCTGTACTCTCCAAGCCACCCACAGCAGCAAAG...GAGGATCCAGAAGTAGAGGATGTGGAGGCGAGGAACTCTGCTTTCCTCTTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR CCA 90 bp CATAGCTGCCACCAGACGGCCTTAAAGTGTCTCAGGGACGCTCCTCAGCCCTTTAGCCTGGAAGGACGCTaGTCTCTTAAACATAGCTGC +
Preference number: 4 (lower is better)
Translates to: HSCHQTALKCLRDAPQPFSLEGR*SLKHSC
Trigger: GCAGCTATGTTTAAGAGACCAGCGTCCTTCCAGGCT...AAAGGGCTGAGGAGCGTCCCTGAGACACTTTAAGGCCGTCTGGTGGCAGCTATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR CCA 90 bp CACCAGACGGCCTTAAAGTGTCTCAGGGACGCTCCTCAGCCCTTTGCTGCTGTGACAAGATTGCGGGCTTaGATCCTGACTATGCTGACT +
Preference number: 4 (lower is better)
Translates to: HQTALKCLRDAPQPFAAVTRLRA*ILTMLT
Trigger: AGTCAGCATAGTCAGGATCCAAGCCCGCAATCTTGT...CACAGCAGCAAAGGGCTGAGGAGCGTCCCTGAGACACTTTAAGGCCGTCTGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000489630.5
CDS-3UTR CCA 90 bp AGTCAGAAAAAGCCAGAACCAAGTCGTCAAACGGGTAGGGGAGGCAGCAGGGATTGGAGGTGGGCTGTCTaGGGAAGCAGAGTTCAGCAT +
Preference number: 4 (lower is better)
Translates to: SQKKPEPSRQTGRGGSRDWRWAV*GSRVQH
Trigger: ATGCTGAACTCTGCTTCCCCAGACAGCCCACCTCCA...ATCCCTGCTGCCTCCCCTACCCGTTTGACGACTTGGTTCTGGCTTTTTCTGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473149.5
CDS-3UTR CCA 90 bp GCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCTGAACAGCCTGGAAGGACGATAGTAGCTCAGATTTaGCTTGTGTGCACCCACTCT +
Preference number: 4 (lower is better)
Translates to: AEGPVSVSTLRSEQPGRTIVAQI*LVCTHS
Trigger: AGAGTGGGTGCACACAAGCCAAATCTGAGCTACTAT...CGTCCTTCCAGGCTGTTCAGACCTCAGCGTTGACACTGAAACTGGCCCCTCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614454.1
3UTR CAA 72 bp ACCTGGCTTCCTTCTCGCGTCACCTTTTCTGACGATTaGTCATCCAGCCACTCCTCAGCCAGCAAGATGCTC +
Preference number: 4 (lower is better)
Translates to: TWLPSRVTFSDD*SSSHSSASKML
Trigger: GAGCATCTTGCTGGCTGAGGAGTGGCTGGATGACAAATCGTCAGAAAAGGTGACGCGAGAAGGAAGCCAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR TCA 90 bp CTTACCTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCTGAACAGCCTCACTTCACAGGCTCTTaGGAAACCCGTATGATATTG +
Preference number: 4 (lower is better)
Translates to: LTSAEGPVSVSTLRSEQPHFTGS*ETRMIL
Trigger: CAATATCATACGGGTTTCTCAAGAGCCTGTGAAGTG...AGGCTGTTCAGACCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGGTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000477737.6
CDS-3UTR TCA 90 bp TCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCTGAACAGCCTGGAAGGTCTCTAATCCAGGACTaGGCCTGTTCCAAATTATCT +
Preference number: 4 (lower is better)
Translates to: SAEGPVSVSTLRSEQPGRSLIQD*ACSKLS
Trigger: AGATAATTTGGAACAGGCTCAGTCCTGGATTAGAGA...CCTTCCAGGCTGTTCAGACCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000477737.6
ENST00000495571.5
CDS-3UTR TCA 90 bp TCCTCCGGCTGCTGGCATTGGAGAGGCCATCCTTCCTTTCACTGCAAGCTGAGCTTCTCCAGATCACTGTaGCCCTGTTCCATTTCCTTA +
Preference number: 4 (lower is better)
Translates to: SSGCWHWRGHPSFHCKLSFSRSL*PCSISL
Trigger: TAAGGAAATGGAACAGGGTCACAGTGATCTGGAGAA...GCTCAGCTTGCAGTGAAAGGAAGGATGGCCTCTCCAATGCCAGCAGCCGGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
ENST00000495571.5
CDS-3UTR TCA 90 bp TCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCTGAACAGCCTGGAAGGGAATCGACATCAGATTaGGGCTTTGCACACTTTTCT +
Preference number: 4 (lower is better)
Translates to: SAEGPVSVSTLRSEQPGRESTSD*GFAHFS
Trigger: AGAAAAGTGTGCAAAGCCTCAATCTGATGTCGATTC...CCTTCCAGGCTGTTCAGACCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
ENST00000495571.5
CDS-3UTR TCA 90 bp CACAACCCCATCAGCGTGGCGGAAAGAGCAGTCGGCAAGCACATCATACAAGGATCGCGTCACCTTTTCTaGCGATTTGTCATCCAGCCA +
Preference number: 4 (lower is better)
Translates to: HNPISVAERAVGKHIIQGSRHLF*RFVIQP
Trigger: TGGCTGGATGACAAATCGTCAGAAAAGGTGACGCGA...TCCTTGTATGATGTGCTTGCCGACTGCTCTTTCCGCCACGCTGATGGGGTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
CDS-3UTR TCA 90 bp GTTTTTATTCTGGTTTCGGGCTCAATTAGAGTTACCTACAACAGACTCCGCGGAAGGACCCATGGGAGCTaGTGCCGTGGGAGGAGCCGT +
Preference number: 4 (lower is better)
Translates to: VFILVSGSIRVTYNRLRGRTHGS*CRGRSR
Trigger: ACGGCTCCTCCCACGGCATCAGCTCCCATGGGTCCT...TCCGCGGAGTCTGTTGTAGGTAACTCTAATTGAGCCCGAAACCAGAATAAAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000495571.5
ENST00000614454.1
CDS-3UTR TCA 90 bp CTCGTCTTGGCTCTCTGGAATCCTGCGTGTCCGCTTCTTTCAGTGGCCAGAAGATTTCAGTGTCAACGCTaGGGTCTGAACAGCCTGGAA +
Preference number: 4 (lower is better)
Translates to: LVLALWNPACPLLSVARRFQCQR*GLNSLE
Trigger: TTCCAGGCTGTTCAGACCTCAGCGTTGACACTGAAA...TCTTCTGGCCACTGAAAGAAGCGGACACGCAGGATTCCAGAGAGCCAAGACGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR TCA 90 bp TGGCCAGAAGAGGAAAGCAGAGTTCCTCGCCTCCACATCCTCTACTTCTGGATCTTTCCTTTTGATGCCTaGACAGCCTCTGGGGGAGTG +
Preference number: 4 (lower is better)
Translates to: WPEEESRVPRLHILYFWIFPFDA*TASGGV
Trigger: CACTCCCCCAGAGGCTGTTCAGGCATCAAAAGGAAA...GATCCAGAAGTAGAGGATGTGGAGGCGAGGAACTCTGCTTTCCTCTTCTGGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489630.5
CDS-3UTR GCA 90 bp TTGGAGAGTACAGGGCAGGGCTGCTCGAGGTGGAGGTGTGGCAATGATGGCGTGGTCTTCTGGATTCGATaGAATCTCAACAGAGGTTGT +
Preference number: 4 (lower is better)
Translates to: LESTGQGCSRWRCGNDGVVFWIR*NLNRGC
Trigger: ACAACCTCTGTTGAGATTGCATCGAATCCAGAAGAC...CACGCCATCATTGCCACACCTCCACCTCGAGCAGCCCTGCCCTGTACTCTCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432242.5
CDS-3UTR GCA 90 bp TCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCTGAACAGCCTGGAAGGGTCTTCTGGATTCGATaGAATCTCAACAGAGGTTGT +
Preference number: 4 (lower is better)
Translates to: SAEGPVSVSTLRSEQPGRVFWIR*NLNRGC
Trigger: ACAACCTCTGTTGAGATTGCATCGAATCCAGAAGAC...CCTTCCAGGCTGTTCAGACCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000477737.6
CDS-3UTR GCA 90 bp TCAACAGAGGTTGTTTCTGACTCGCAGTCCACAGTGGCCACGTCGGGCTTGGGATTCCCGCCAAGCAACTaGTTGACCATCAAACTTCAC +
Preference number: 4 (lower is better)
Translates to: STEVVSDSQSTVATSGLGFPPSN*LTIKLH
Trigger: GTGAAGTTTGATGGTCAAGCAGTTGCTTGGCGGGAA...TCCCAAGCCCGACGTGGCCACTGTGGACTGCGAGTCAGAAACAACCTCTGTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422503.6
ENST00000432242.5
CDS-3UTR GCA 90 bp ACAGTCAGAAAAAGCCAGAACCAAGTCGTCAAACGGGTAGGGGAGGCAGCAGGGACCTTAGACACGACATaGTTGTCCAGGACGGGAACA +
Preference number: 4 (lower is better)
Translates to: TVRKSQNQVVKRVGEAAGTLDTT*LSRTGT
Trigger: TGTTCCCGTCCTGGACAAGCATGTCGTGTCTAAGGT...CCCTGCTGCCTCCCCTACCCGTTTGACGACTTGGTTCTGGCTTTTTCTGACTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR GCA 90 bp GAGGGCGGCCTTACCTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCTTTCATAGGATTGAATTaGCTGTTCCACTTTTCGCTT +
Preference number: 4 (lower is better)
Translates to: EGGLTSAEGPVSVSTLRSFIGLN*LFHFSL
Trigger: AAGCGAAAAGTGGAACAGGCAATTCAATCCTATGAA...AGACCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGGTAAGGCCGCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR GCA 90 bp GTTACCTACAACAGACTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCTGGAGTTCCATGGCCTaGTGGATGTACATTTTCCCA +
Preference number: 4 (lower is better)
Translates to: VTYNRLRGGASFSVNAEVWSSMA*WMYIFP
Trigger: TGGGAAAATGTACATCCAGCAGGCCATGGAACTCCA...GACCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGTCTGTTGTAGGTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495571.5
ENST00000614454.1
CDS-3UTR GCA 90 bp TCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCTGAACAGCCTGGAAGGGCTGATCTTAATAAGTaGACTCCGAGGGCAAAATTC +
Preference number: 4 (lower is better)
Translates to: SAEGPVSVSTLRSEQPGRADLNK*TPRAKF
Trigger: GAATTTTGCCCTCGGAGTGCACTTATTAAGATCAGC...CCTTCCAGGCTGTTCAGACCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
ENST00000495571.5
ENST00000614454.1
CDS-3UTR GCA 90 bp TGGCCAGAAGAGGAAAGCAGAGTTCCTCGCCTCCACATCCTCTACTTCTGGATCGGCTCTCTGGAATCCTaGGTGTCCGCTTCTTTCAGT +
Preference number: 4 (lower is better)
Translates to: WPEEESRVPRLHILYFWIGSLES*VSASFS
Trigger: ACTGAAAGAAGCGGACACGCAGGATTCCAGAGAGCC...GATCCAGAAGTAGAGGATGTGGAGGCGAGGAACTCTGCTTTCCTCTTCTGGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR GCA 90 bp TTAGAGTTACCTACAACAGACTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGGGCTCTCTGGAATCCTaGGTGTCCGCTTCTTTCAGT +
Preference number: 4 (lower is better)
Translates to: LELPTTDSAEGPVSVSTLGSLES*VSASFS
Trigger: ACTGAAAGAAGCGGACACGCAGGATTCCAGAGAGCC...CAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGTCTGTTGTAGGTAACTCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495571.5
ENST00000614454.1
CDS-3UTR GCA 90 bp CTTTGGGTATCACAATTTTGGCAAACACATAATCTCCAACCTGGAGCAGCGGGCCGCTCCTCAGCCCTTTaGTGCTGTGGGTGGCTTGGA +
Preference number: 4 (lower is better)
Translates to: LWVSQFWQTHNLQPGAAGRSSAL*CCGWLG
Trigger: TCCAAGCCACCCACAGCAGCAAAGGGCTGAGGAGCG...GCCCGCTGCTCCAGGTTGGAGATTATGTGTTTGCCAAAATTGTGATACCCAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR CCA 90 bp TCAGTTTACCTCATCAAAGACCTTAGACACGACATGCTTGTCCAGGACGGGAACAGGCAATATGTCGGGTaGAAGACGTGGCGGCTCCCG +
Preference number: 4 (lower is better)
Translates to: SVYLIKDLRHDMLVQDGNRQYVG*KTWRLP
Trigger: CGGGAGCCGCCACGTCTTCCACCCGACATATTGCCT...GTTCCCGTCCTGGACAAGCATGTCGTGTCTAAGGTCTTTGATGAGGTAAACTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416277.5
ENST00000448638.5
CDS-3UTR CCA 90 bp CTTACCTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCTGAACAGCCTTGCTCTGTAGAGCTGTaGAAACAGACCATCAGCATA +
Preference number: 4 (lower is better)
Translates to: LTSAEGPVSVSTLRSEQPCSVEL*KQTISI
Trigger: TATGCTGATGGTCTGTTTCCACAGCTCTACAGAGCA...AGGCTGTTCAGACCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGGTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000477737.6
CDS-3UTR CCA 90 bp GCTTGGAGAGTACAGGGCAGGGCTGCTCGAGGTGGAGGTGTGGCAATGATGGCGTGTCACCATCCTTTGTaGAGAATGCAGGAAATTCTA +
Preference number: 4 (lower is better)
Translates to: AWRVQGRAARGGGVAMMACHHPL*RMQEIL
Trigger: TAGAATTTCCTGCATTCTCCACAAAGGATGGTGACA...CGCCATCATTGCCACACCTCCACCTCGAGCAGCCCTGCCCTGTACTCTCCAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432242.5
CDS-3UTR CCA 90 bp ATGGAGGGGAGAGGAGTCTTTGCTACAGACAGGGCAGGCATAGGCGGCGCGGAGTGTCACCATCCTTTGTaGAGAATGCAGGAAATTCTA +
Preference number: 4 (lower is better)
Translates to: MEGRGVFATDRAGIGGAECHHPL*RMQEIL
Trigger: TAGAATTTCCTGCATTCTCCACAAAGGATGGTGACA...CTCCGCGCCGCCTATGCCTGCCCTGTCTGTAGCAAAGACTCCTCTCCCCTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000477737.6
CDS-3UTR CCA 90 bp CAAGGACTCAGAATAAAGGTCTTGCATCTTCTCCAGATCACTGTGACCCTGTTCACTCGCAGTCCACAGTaGCCACGTCGGGCTTGGGAG +
Preference number: 4 (lower is better)
Translates to: QGLRIKVLHLLQITVTLFTRSPQ*PRRAWE
Trigger: CTCCCAAGCCCGACGTGGCCACTGTGGACTGCGAGT...GAACAGGGTCACAGTGATCTGGAGAAGATGCAAGACCTTTATTCTGAGTCCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000433678.5
ENST00000448638.5
CDS-3UTR CCA 90 bp CTCATGCTGTCTTCAGCTGTATGGAATGAAGGAAACAGCTCCAGAGCGAGAGACCGGGCCAGGGCTGTGTaGATTCTCTCACTGTACCAC +
Preference number: 4 (lower is better)
Translates to: LMLSSAVWNEGNSSRARDRARAV*ILSLYH
Trigger: GTGGTACAGTGAGAGAATCCACACAGCCCTGGCCCG...GTCTCTCGCTCTGGAGCTGTTTCCTTCATTCCATACAGCTGAAGACAGCATGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422503.6
ENST00000433678.5
CDS-3UTR CCA 90 bp TGTCATCCAGCCACTCCTCAGCCAGCAAGATGCTCATTTCTTTGTCACTTAGAGCAGTCCTCCGGCTGCTaGCATTGGAGAGGCCATCCT +
Preference number: 4 (lower is better)
Translates to: CHPATPQPARCSFLCHLEQSSGC*HWRGHP
Trigger: AGGATGGCCTCTCCAATGCCAGCAGCCGGAGGACTG...CTCTAAGTGACAAAGAAATGAGCATCTTGCTGGCTGAGGAGTGGCTGGATGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR CCA 90 bp CCCCACAGGCGTGATGAAGGAGGTGGACACGACCTTGGTGTCTCCGTAACTGAAAGTTCCATGGCCTGCTaGATGTACATTTTCCCAGCT +
Preference number: 4 (lower is better)
Translates to: PHRRDEGGGHDLGVSVTESSMAC*MYIFPA
Trigger: AGCTGGGAAAATGTACATCCAGCAGGCCATGGAACT...TTCAGTTACGGAGACACCAAGGTCGTGTCCACCTCCTTCATCACGCCTGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR CCA 90 bp GCAATTTCTGTTGCTCTCCCGGGGCCTTGTTTGCATAATTCTTCTTGGCAGCCTAAGCCCACCAGTGCTTaGGTGCGGCTCACACACTTC +
Preference number: 4 (lower is better)
Translates to: AISVALPGPCLHNSSWQPKPTSA*VRLTHF
Trigger: GAAGTGTGTGAGCCGCACCCAAGCACTGGTGGGCTT...AGGCTGCCAAGAAGAATTATGCAAACAAGGCCCCGGGAGAGCAACAGAAATTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR CCA 90 bp TTTCGGGCTCAATTAGAGTTACCTACAACAGACTCCGCGGAGGGGCCAGTTTCACTCGTCTTGGCTCTCTaGAATCCTGCGTGTCCGCTT +
Preference number: 4 (lower is better)
Translates to: FRAQLELPTTDSAEGPVSLVLAL*NPACPL
Trigger: AAGCGGACACGCAGGATTCCAGAGAGCCAAGACGAG...TGAAACTGGCCCCTCCGCGGAGTCTGTTGTAGGTAACTCTAATTGAGCCCGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495571.5
ENST00000614454.1
CDS-3UTR CCA 90 bp AGATTGCGGGCTTGGATCCTGACTATGCTGACTGCTAAACAATTTGAAAGTCCTCCCTGGCAGGACCCATaGGAGCTGATGCCGTGGGAG +
Preference number: 4 (lower is better)
Translates to: RLRAWILTMLTAKQFESPPWQDP*ELMPWE
Trigger: CTCCCACGGCATCAGCTCCCATGGGTCCTGCCAGGG...AGGACTTTCAAATTGTTTAGCAGTCAGCATAGTCAGGATCCAAGCCCGCAATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CCA 90 bp GTTTTTATTCTGGTTTCGGGCTCAATTAGAGTTACCTACAACAGACTCCGCGGACCCTGGCAGGACCCATaGGAGCTGATGCCGTGGGAG +
Preference number: 4 (lower is better)
Translates to: VFILVSGSIRVTYNRLRGPWQDP*ELMPWE
Trigger: CTCCCACGGCATCAGCTCCCATGGGTCCTGCCAGGG...TCCGCGGAGTCTGTTGTAGGTAACTCTAATTGAGCCCGAAACCAGAATAAAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000495571.5
ENST00000614454.1
CDS-3UTR CCA 90 bp CCAGCTAGGATTTCACTTTCCAGCATCGACAGCTCTTTCAGTGAAATGGGCCAACAGGGCTGCTCGAGGTaGAGGTGTGGCAATGATGGC +
Preference number: 4 (lower is better)
Translates to: PARISLSSIDSSFSEMGQQGCSR*RCGNDG
Trigger: GCCATCATTGCCACACCTCCACCTCGAGCAGCCCTG...TTGGCCCATTTCACTGAAAGAGCTGTCGATGCTGGAAAGTGAAATCCTAGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR CCA 90 bp TTTCGGGCTCAATTAGAGTTACCTACAACAGACTCCGCGGAGGGGCCAGTTTCACTTTGCTGCTGTGGGTaGCTTGGAGAGTACAGGGCA +
Preference number: 4 (lower is better)
Translates to: FRAQLELPTTDSAEGPVSLCCCG*LGEYRA
Trigger: TGCCCTGTACTCTCCAAGCCACCCACAGCAGCAAAG...TGAAACTGGCCCCTCCGCGGAGTCTGTTGTAGGTAACTCTAATTGAGCCCGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495571.5
ENST00000614454.1
3UTR CAA 72 bp AGGTGTCTTCTGGATTCGATGCAATCTCAACAGAGGTaGTTTCTGACTCGCAGTCCACAGTGGCCACGTCGG +
Preference number: 4 (lower is better)
Translates to: RCLLDSMQSQQR*FLTRSPQWPRR
Trigger: CCGACGTGGCCACTGTGGACTGCGAGTCAGAAACAACCTCTGTTGAGATTGCATCGAATCCAGAAGACACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422503.6
ENST00000432242.5
3UTR CAA 72 bp AATGAAGGAAACAGCTCCAGAGCGAGAGACTTGGGCTaGAAGCTCATCCAGCACTGCCCATCTGAATGGCCT +
Preference number: 4 (lower is better)
Translates to: NEGNSSRARDLG*KLIQHCPSEWP
Trigger: AGGCCATTCAGATGGGCAGTGCTGGATGAGCTTCAAGCCCAAGTCTCTCGCTCTGGAGCTGTTTCCTTCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000422503.6
ENST00000432242.5
ENST00000433678.5
ENST00000495571.5
CDS-3UTR TCA 90 bp GCTGTATGGAATGAAGGAAACAGCTCCAGAGCGAGAGACTTGGGCTTGAAGCTCCGCACTGTTCCAAGATaGCACCAAAAATCTGCCGGC +
Preference number: 4 (lower is better)
Translates to: AVWNEGNSSRARDLGLKLRTVPR*HQKSAG
Trigger: GCCGGCAGATTTTTGGTGTCATCTTGGAACAGTGCG...GAGCTTCAAGCCCAAGTCTCTCGCTCTGGAGCTGTTTCCTTCATTCCATACAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000433678.5
CDS-3UTR TCA 90 bp TCTGGATTCGATGCAATCTCAACAGAGGTTGTTTCTGACTCGCAGTCCACAGTGGAAACACGTCCTCTCTaGCTCCAGCTCCTGGAGGGA +
Preference number: 4 (lower is better)
Translates to: SGFDAISTEVVSDSQSTVETRPL*LQLLEG
Trigger: TCCCTCCAGGAGCTGGAGTCAGAGAGGACGTGTTTC...CACTGTGGACTGCGAGTCAGAAACAACCTCTGTTGAGATTGCATCGAATCCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422503.6
ENST00000432242.5
CDS-3UTR TCA 90 bp TTGGCTTTTATATCCACAACCCCATCAGCGTGGCGGAAAGAGCAGTCGGCAAGCCTTCCAAAGAGGCTTTaGCTCCCATCCTGTAGCCAT +
Preference number: 4 (lower is better)
Translates to: LAFISTTPSAWRKEQSASLPKRL*LPSCSH
Trigger: ATGGCTACAGGATGGGAGTCAAAGCCTCTTTGGAAG...GCTTGCCGACTGCTCTTTCCGCCACGCTGATGGGGTTGTGGATATAAAAGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000422503.6
ENST00000432242.5
ENST00000448638.5
CDS-3UTR TCA 90 bp TCCTCCGGCTGCTGGCATTGGAGAGGCCATCCTTCCTTTCACTGCAAGCTGAGCTCTCTAATCCAGGACTaGGCCTGTTCCAAATTATCT +
Preference number: 4 (lower is better)
Translates to: SSGCWHWRGHPSFHCKLSSLIQD*ACSKLS
Trigger: AGATAATTTGGAACAGGCTCAGTCCTGGATTAGAGA...GCTCAGCTTGCAGTGAAAGGAAGGATGGCCTCTCCAATGCCAGCAGCCGGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
ENST00000495571.5
CDS-3UTR TCA 90 bp AAAGAGTCAGATCTTCATTCTGAACAGCCTCTGGGGGAGTGGGATCCTTGCAACACTGTTTCAGGTGGCTaGTCAGGTCTCCCATCGGTC +
Preference number: 4 (lower is better)
Translates to: KESDLHSEQPLGEWDPCNTVSGG*SGLPSV
Trigger: GACCGATGGGAGACCTGATCAGCCACCTGAAACAGT...GTTGCAAGGATCCCACTCCCCCAGAGGCTGTTCAGAATGAAGATCTGACTCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416277.5
ENST00000448638.5
CDS-3UTR TCA 90 bp GCTGTATGGAATGAAGGAAACAGCTCCAGAGCGAGAGACTTGGGCTTGAAGCTCGTCAGATCTTCATTCTaGACAGCCTCTGGGGGAGTG +
Preference number: 4 (lower is better)
Translates to: AVWNEGNSSRARDLGLKLVRSSF*TASGGV
Trigger: CACTCCCCCAGAGGCTGTTCAGAATGAAGATCTGAC...GAGCTTCAAGCCCAAGTCTCTCGCTCTGGAGCTGTTTCCTTCATTCCATACAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000433678.5
ENST00000495571.5
CDS-3UTR TCA 90 bp GACCTTAGACACGACATGCTTGTCCAGGACGGGAACATAGGTGGAGCTGTGCGGGAACAGATTTCCTTTTaGTGCTTGCTGTCTCCATCC +
Preference number: 4 (lower is better)
Translates to: DLRHDMLVQDGNIGGAVREQISF*CLLSPS
Trigger: GGATGGAGACAGCAAGCATCAAAAGGAAATCTGTTC...CCGCACAGCTCCACCTATGTTCCCGTCCTGGACAAGCATGTCGTGTCTAAGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
ENST00000495571.5
CDS-3UTR TCA 90 bp GTTACCTACAACAGACTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCGAACAGATTTCCTTTTaGTGCTTGCTGTCTCCATCC +
Preference number: 4 (lower is better)
Translates to: VTYNRLRGGASFSVNAEVEQISF*CLLSPS
Trigger: GGATGGAGACAGCAAGCATCAAAAGGAAATCTGTTC...GACCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGTCTGTTGTAGGTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495571.5
CDS-3UTR TCA 90 bp ACAACCCCATCAGCGTGGCGGAAAGAGCAGTCGGCAAGCACATCATACAAGGATCTGAACCTTTTGATCTaGAAGGCCCCATGGTCCCTT +
Preference number: 4 (lower is better)
Translates to: TTPSAWRKEQSASTSYKDLNLLI*KAPWSL
Trigger: AAGGGACCATGGGGCCTTTCAGATCAAAAGGTTCAG...ATCCTTGTATGATGTGCTTGCCGACTGCTCTTTCCGCCACGCTGATGGGGTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
CDS-3UTR TCA 90 bp TTGTCATCCAGCCACTCCTCAGCCAGCAAGATGCTCATTTCTTTGTCACTTAGACGGGACTGCTGCCACTaGCAAGGCATCCATGAGGGT +
Preference number: 4 (lower is better)
Translates to: LSSSHSSASKMLISLSLRRDCCH*QGIHEG
Trigger: ACCCTCATGGATGCCTTGTCAGTGGCAGCAGTCCCG...TCTAAGTGACAAAGAAATGAGCATCTTGCTGGCTGAGGAGTGGCTGGATGACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR TCA 90 bp CCAGAAGAGGAAAGCAGAGTTCCTCGCCTCCACATCCTCTACTTCTGGATCCTCGGGGGTGACTTTATATaGGAGCAAGAGAGCGCATAC +
Preference number: 4 (lower is better)
Translates to: PEEESRVPRLHILYFWILGGDFI*EQESAY
Trigger: GTATGCGCTCTCTTGCTCTCATATAAAGTCACCCCC...GAGGATCCAGAAGTAGAGGATGTGGAGGCGAGGAACTCTGCTTTCCTCTTCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR TCA 90 bp AGAATAAAGGTCTTGCATCTTCTCCAGATCACTGTGACCCTGTTCCATTTCCTTAGGACCCATGGGAGCTaGTGCCGTGGGAGGAGCCGT +
Preference number: 4 (lower is better)
Translates to: RIKVLHLLQITVTLFHFLRTHGS*CRGRSR
Trigger: ACGGCTCCTCCCACGGCATCAGCTCCCATGGGTCCT...AAGGAAATGGAACAGGGTCACAGTGATCTGGAGAAGATGCAAGACCTTTATTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000495571.5
CDS-3UTR TCA 90 bp ATGGAACTCTCCTCCAGTCAAAGCAGCAACCTCTTTCAAAAACCTGTTTGCAATAGGACCCATGGGAGCTaGTGCCGTGGGAGGAGCCGT +
Preference number: 4 (lower is better)
Translates to: MELSSSQSSNLFQKPVCNRTHGS*CRGRSR
Trigger: ACGGCTCCTCCCACGGCATCAGCTCCCATGGGTCCT...ATTGCAAACAGGTTTTTGAAAGAGGTTGCTGCTTTGACTGGAGGAGAGTTCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000495571.5
CDS-3UTR TCA 90 bp CCAGAAGAGGAAAGCAGAGTTCCTCGCCTCCACATCCTCTACTTCTGGATCCTCTTTCAGTGTCAACGCTaGGGTCTGAACAGCCTGGAA +
Preference number: 4 (lower is better)
Translates to: PEEESRVPRLHILYFWILFQCQR*GLNSLE
Trigger: TTCCAGGCTGTTCAGACCTCAGCGTTGACACTGAAA...GAGGATCCAGAAGTAGAGGATGTGGAGGCGAGGAACTCTGCTTTCCTCTTCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR GCA 90 bp ACAACCCCATCAGCGTGGCGGAAAGAGCAGTCGGCAAGCACATCATACAAGGATTCTTGCCTCTGCAGCTaGTGCTCAGAGATGGTAGAA +
Preference number: 4 (lower is better)
Translates to: TTPSAWRKEQSASTSYKDSCLCS*CSEMVE
Trigger: TTCTACCATCTCTGAGCAGCAGCTGCAGAGGCAAGA...ATCCTTGTATGATGTGCTTGCCGACTGCTCTTTCCGCCACGCTGATGGGGTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000422503.6
ENST00000432242.5
ENST00000448638.5
CDS-3UTR GCA 90 bp CTCATGCTGTCTTCAGCTGTATGGAATGAAGGAAACAGCTCCAGAGCGAGAGACCATCCCTCTTGCCTCTaGAGCTGCTGCTCAGAGATG +
Preference number: 4 (lower is better)
Translates to: LMLSSAVWNEGNSSRARDHPSCL*SCCSEM
Trigger: CATCTCTGAGCAGCAGCTGCAGAGGCAAGAGGGATG...GTCTCTCGCTCTGGAGCTGTTTCCTTCATTCCATACAGCTGAAGACAGCATGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422503.6
ENST00000432242.5
ENST00000433678.5
CDS-3UTR GCA 90 bp AAAGAGTCAGATCTTCATTCTGAACAGCCTCTGGGGGAGTGGGATCCTTGCAACGCTCCCCCTCCAGAATaGCGCCAAAATCCAGCACTA +
Preference number: 4 (lower is better)
Translates to: KESDLHSEQPLGEWDPCNAPPPE*RQNPAL
Trigger: TAGTGCTGGATTTTGGCGGCATTCTGGAGGGGGAGC...GTTGCAAGGATCCCACTCCCCCAGAGGCTGTTCAGAATGAAGATCTGACTCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000433678.5
ENST00000448638.5
CDS-3UTR GCA 90 bp GCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCTGAACAGCCTGGAAGGACGATCCTTTGTGGAGAATaGAGGAAATTCTACACACTC +
Preference number: 4 (lower is better)
Translates to: AEGPVSVSTLRSEQPGRTILCGE*RKFYTL
Trigger: GAGTGTGTAGAATTTCCTGCATTCTCCACAAAGGAT...CGTCCTTCCAGGCTGTTCAGACCTCAGCGTTGACACTGAAACTGGCCCCTCCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000477737.6
CDS-3UTR GCA 90 bp TCCGGTTTGGCTTTTATATCCACAACCCCATCAGCGTGGCGGAAAGAGCAGTCGGCTTCCTCCATCTCTTaGCAAACGAGAAACACGTCC +
Preference number: 4 (lower is better)
Translates to: SGLAFISTTPSAWRKEQSASSIS*QTRNTS
Trigger: GGACGTGTTTCTCGTTTGGCAAGAGATGGAGGAAGC...CGACTGCTCTTTCCGCCACGCTGATGGGGTTGTGGATATAAAAGCCAAACCGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000422503.6
ENST00000432242.5
ENST00000448638.5
CDS-3UTR GCA 90 bp TCCTTTGTGGAGAATGCAGGAAATTCTACACACTCTGTTCTCTCGGCAAATGCGGGATCTGGGCCAGCGTaGTGCAGGCTTCCTCCATCT +
Preference number: 4 (lower is better)
Translates to: SFVENAGNSTHSVLSANAGSGPA*CRLPPS
Trigger: AGATGGAGGAAGCCTGCAGCACGCTGGCCCAGATCC...CGCATTTGCCGAGAGAACAGAGTGTGTAGAATTTCCTGCATTCTCCACAAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422503.6
ENST00000432242.5
CDS-3UTR GCA 90 bp GAATGCAGGAAATTCTACACACTCTGTTCTCTCGGCAAATGCGTGGAATCTGCTGGATCTGGGCCAGCGTaGTGCAGGCTTCCTCCATCT +
Preference number: 4 (lower is better)
Translates to: ECRKFYTLCSLGKCVESAGSGPA*CRLPPS
Trigger: AGATGGAGGAAGCCTGCAGCACGCTGGCCCAGATCC...AGCAGATTCCACGCATTTGCCGAGAGAACAGAGTGTGTAGAATTTCCTGCATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422503.6
ENST00000432242.5
CDS-3UTR GCA 90 bp TCCTCCGGCTGCTGGCATTGGAGAGGCCATCCTTCCTTTCACTGCAAGCTGAGCGTCTTCTGGATTCGATaGAATCTCAACAGAGGTTGT +
Preference number: 4 (lower is better)
Translates to: SSGCWHWRGHPSFHCKLSVFWIR*NLNRGC
Trigger: ACAACCTCTGTTGAGATTGCATCGAATCCAGAAGAC...GCTCAGCTTGCAGTGAAAGGAAGGATGGCCTCTCCAATGCCAGCAGCCGGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
CDS-3UTR GCA 90 bp TCCTCCGGCTGCTGGCATTGGAGAGGCCATCCTTCCTTTCACTGCAAGCTGAGCGGTCAGAAGGTAGATTaGCTGTGTTTCTTTATCAGC +
Preference number: 4 (lower is better)
Translates to: SSGCWHWRGHPSFHCKLSGQKVD*LCFFIS
Trigger: GCTGATAAAGAAACACAGGCAATCTACCTTCTGACC...GCTCAGCTTGCAGTGAAAGGAAGGATGGCCTCTCCAATGCCAGCAGCCGGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR GCA 90 bp ACAGTCAGAAAAAGCCAGAACCAAGTCGTCAAACGGGTAGGGGAGGCAGCAGGGTGGAGTTCCATGGCCTaGTGGATGTACATTTTCCCA +
Preference number: 4 (lower is better)
Translates to: TVRKSQNQVVKRVGEAAGWSSMA*WMYIFP
Trigger: TGGGAAAATGTACATCCAGCAGGCCATGGAACTCCA...CCCTGCTGCCTCCCCTACCCGTTTGACGACTTGGTTCTGGCTTTTTCTGACTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR GCA 90 bp CACAACCCCATCAGCGTGGCGGAAAGAGCAGTCGGCAAGCACATCATACAAGGAAGTCTCTCCCACTCATaGTGTCTTCAGCTGTATGGA +
Preference number: 4 (lower is better)
Translates to: HNPISVAERAVGKHIIQGSLSHS*CLQLYG
Trigger: TCCATACAGCTGAAGACAGCATGAGTGGGAGAGACT...TCCTTGTATGATGTGCTTGCCGACTGCTCTTTCCGCCACGCTGATGGGGTTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422503.6
ENST00000432242.5
CDS-3UTR GCA 90 bp CACCAGACGGCCTTAAAGTGTCTCAGGGACGCTCCTCAGCCCTTTGCTGCTGTGGCTGATCTTAATAAGTaGACTCCGAGGGCAAAATTC +
Preference number: 4 (lower is better)
Translates to: HQTALKCLRDAPQPFAAVADLNK*TPRAKF
Trigger: GAATTTTGCCCTCGGAGTGCACTTATTAAGATCAGC...CACAGCAGCAAAGGGCTGAGGAGCGTCCCTGAGACACTTTAAGGCCGTCTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR GCA 90 bp GCTGTATGGAATGAAGGAAACAGCTCCAGAGCGAGAGACTTGGGCTTGAAGCTCGGCTCTCTGGAATCCTaGGTGTCCGCTTCTTTCAGT +
Preference number: 4 (lower is better)
Translates to: AVWNEGNSSRARDLGLKLGSLES*VSASFS
Trigger: ACTGAAAGAAGCGGACACGCAGGATTCCAGAGAGCC...GAGCTTCAAGCCCAAGTCTCTCGCTCTGGAGCTGTTTCCTTCATTCCATACAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000495571.5
CDS-3UTR GCA 90 bp GACCTTAGACACGACATGCTTGTCCAGGACGGGAACATAGGTGGAGCTGTGCGGTCTCTTAAACATAGCTaGCACCAGACGGCCTTAAAG +
Preference number: 4 (lower is better)
Translates to: DLRHDMLVQDGNIGGAVRSLKHS*HQTALK
Trigger: CTTTAAGGCCGTCTGGTGGCAGCTATGTTTAAGAGA...CCGCACAGCTCCACCTATGTTCCCGTCCTGGACAAGCATGTCGTGTCTAAGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR GCA 90 bp CCTACAACAGACTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCTGAATCTCTTAAACATAGCTaGCACCAGACGGCCTTAAAG +
Preference number: 4 (lower is better)
Translates to: PTTDSAEGPVSVSTLRSESLKHS*HQTALK
Trigger: CTTTAAGGCCGTCTGGTGGCAGCTATGTTTAAGAGA...TTCAGACCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGTCTGTTGTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495571.5
ENST00000614454.1
CDS-3UTR GCA 90 bp GCAATTTCTGTTGCTCTCCCGGGGCCTTGTTTGCATAATTCTTCTTGGCAGCCTGGGGAGAGGAGTCTTTaGTACAGACAGGGCAGGCAT +
Preference number: 4 (lower is better)
Translates to: AISVALPGPCLHNSSWQPGERSL*YRQGRH
Trigger: ATGCCTGCCCTGTCTGTAGCAAAGACTCCTCTCCCC...AGGCTGCCAAGAAGAATTATGCAAACAAGGCCCCGGGAGAGCAACAGAAATTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000489630.5
CDS-3UTR CCA 90 bp TATATCCACAACCCCATCAGCGTGGCGGAAAGAGCAGTCGGCAAGCACATCATAATCTCCAAGGCCCTCTaGAGGAGAAGCTCCTTGGAT +
Preference number: 4 (lower is better)
Translates to: YIHNPISVAERAVGKHIIISKAL*RRSSLD
Trigger: ATCCAAGGAGCTTCTCCTCCAGAGGGCCTTGGAGAT...TATGATGTGCTTGCCGACTGCTCTTTCCGCCACGCTGATGGGGTTGTGGATATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000422503.6
ENST00000432242.5
CDS-3UTR CCA 90 bp CCCCACAGGCGTGATGAAGGAGGTGGACACGACCTTGGTGTCTCCGTAACTGAAATCTGCTGTGGGTCTTaGCACTCAGATCCTTTAGAA +
Preference number: 4 (lower is better)
Translates to: PHRRDEGGGHDLGVSVTEICCGS*HSDPLE
Trigger: TTCTAAAGGATCTGAGTGCCAAGACCCACAGCAGAT...TTCAGTTACGGAGACACCAAGGTCGTGTCCACCTCCTTCATCACGCCTGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432242.5
CDS-3UTR CCA 90 bp AGATGCAATCATTATGCAATCTTCCAAAGAGGCTTTGACTCCCATCCTGTAGCCACCAGCCTCTGGATCTaGGCCAGCGTGCTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: RCNHYAIFQRGFDSHPVATSLWI*ASVLQA
Trigger: AGCCTGCAGCACGCTGGCCCAGATCCAGAGGCTGGT...GGCTACAGGATGGGAGTCAAAGCCTCTTTGGAAGATTGCATAATGATTGCATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000422503.6
ENST00000432242.5
ENST00000448638.5
CDS-3UTR CCA 90 bp CGTTTGACCTGGTCTATAACTGTTTCAGGTGGAATGATACACATGACAGTCTCTTCGGCCACCAGCCTCTaGATCTGGGCCAGCGTGCTG +
Preference number: 4 (lower is better)
Translates to: RLTWSITVSGGMIHMTVSSATSL*IWASVL
Trigger: CAGCACGCTGGCCCAGATCCAGAGGCTGGTGGCCGA...AGAGACTGTCATGTGTATCATTCCACCTGAAACAGTTATAGACCAGGTCAAACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000433678.5
CDS-3UTR CCA 90 bp TCAGTCTTGCAGATCTCAGACAAGTTACCGAGTCTGAATTTCAGTCCTAATATTTGGCCACGTCGGGCTTaGGAGGCTCGGCCACCAGCC +
Preference number: 4 (lower is better)
Translates to: SVLQISDKLPSLNFSPNIWPRRA*EARPPA
Trigger: GGCTGGTGGCCGAGCCTCCCAAGCCCGACGTGGCCA...AATATTAGGACTGAAATTCAGACTCGGTAACTTGTCTGAGATCTGCAAGACTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000477737.6
CDS-3UTR CCA 90 bp AGATGCAATCATTATGCAATCTTCCAAAGAGGCTTTGACTCCCATCCTGTAGCCACTCGCAGTCCACAGTaGCCACGTCGGGCTTGGGAG +
Preference number: 4 (lower is better)
Translates to: RCNHYAIFQRGFDSHPVATRSPQ*PRRAWE
Trigger: CTCCCAAGCCCGACGTGGCCACTGTGGACTGCGAGT...GGCTACAGGATGGGAGTCAAAGCCTCTTTGGAAGATTGCATAATGATTGCATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422503.6
ENST00000432242.5
ENST00000448638.5
CDS-3UTR CCA 90 bp AGACACGACATGCTTGTCCAGGACGGGAACATAGGTGGAGCTGTGCGGGACTGCACTCATTCTCCGGTTTaGCTTTTATATCCACAACCC +
Preference number: 4 (lower is better)
Translates to: RHDMLVQDGNIGGAVRDCTHSPV*LLYPQP
Trigger: GGGTTGTGGATATAAAAGCCAAACCGGAGAATGAGT...GCAGTCCCGCACAGCTCCACCTATGTTCCCGTCCTGGACAAGCATGTCGTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
CDS-3UTR CCA 90 bp GACTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCTGAACAGCCTGGATTGAGTTTGGCTCCTTaGGGGTTAATTAATGTCATC +
Preference number: 4 (lower is better)
Translates to: DSAEGPVSVSTLRSEQPGLSLAP*GLINVI
Trigger: GATGACATTAATTAACCCCCAAGGAGCCAAACTCAA...TCCAGGCTGTTCAGACCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495571.5
ENST00000614454.1
CDS-3UTR CCA 90 bp CTTACCTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCTGAACAGCCTGCTCTTTCAGTGAAATaGGCCAATTCAACCGTTCTA +
Preference number: 4 (lower is better)
Translates to: LTSAEGPVSVSTLRSEQPALSVK*ANSTVL
Trigger: TAGAACGGTTGAATTGGCCCATTTCACTGAAAGAGC...AGGCTGTTCAGACCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGGTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CCA 90 bp AAGCCCACCAGTGCTTGGGTGCGGCTCACACACTTCTTCACAACCCCTGGAAAAAGTTCCATGGCCTGCTaGATGTACATTTTCCCAGCT +
Preference number: 4 (lower is better)
Translates to: KPTSAWVRLTHFFTTPGKSSMAC*MYIFPA
Trigger: AGCTGGGAAAATGTACATCCAGCAGGCCATGGAACT...TTTTCCAGGGGTTGTGAAGAAGTGTGTGAGCCGCACCCAAGCACTGGTGGGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR CCA 90 bp CCTACAACAGACTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCTGAATTGCATAATTCTTCTTaGCAGCCTCCTGGAGTTCCA +
Preference number: 4 (lower is better)
Translates to: PTTDSAEGPVSVSTLRSELHNSS*QPPGVP
Trigger: TGGAACTCCAGGAGGCTGCCAAGAAGAATTATGCAA...TTCAGACCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGTCTGTTGTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495571.5
ENST00000614454.1
CDS-3UTR CCA 90 bp CTGAAGACACATCTGAAGAATCGTGGTCATAAACCTGGCTTCCTTCTCGCGTCAAAGCCCACCAGTGCTTaGGTGCGGCTCACACACTTC +
Preference number: 4 (lower is better)
Translates to: LKTHLKNRGHKPGFLLASKPTSA*VRLTHF
Trigger: GAAGTGTGTGAGCCGCACCCAAGCACTGGTGGGCTT...TGACGCGAGAAGGAAGCCAGGTTTATGACCACGATTCTTCAGATGTGTCTTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR CCA 90 bp ATGAAAATGTCAGGAAACTATACAGTAGGGGATGTTCAGTCTTGCAGATCTCAGGGAGGTGGGCTGTCCTaGGCTCGGGGTGTGTCCCCT +
Preference number: 4 (lower is better)
Translates to: MKMSGNYTVGDVQSCRSQGGGLS*ARGVSP
Trigger: AGGGGACACACCCCGAGCCCAGGACAGCCCACCTCC...CTGAGATCTGCAAGACTGAACATCCCCTACTGTATAGTTTCCTGACATTTTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CCA 90 bp AAAGAGTCAGATCTTCATTCTGAACAGCCTCTGGGGGAGTGGGATCCTTGCAACCTTTGCTGCTGTGGGTaGCTTGGAGAGTACAGGGCA +
Preference number: 4 (lower is better)
Translates to: KESDLHSEQPLGEWDPCNLCCCG*LGEYRA
Trigger: TGCCCTGTACTCTCCAAGCCACCCACAGCAGCAAAG...GTTGCAAGGATCCCACTCCCCCAGAGGCTGTTCAGAATGAAGATCTGACTCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000495571.5
CDS-3UTR CCA 90 bp AGTCAGAAAAAGCCAGAACCAAGTCGTCAAACGGGTAGGGGAGGCAGCAGGGATAGCCTGGAAGGACGCTaGTCTCTTAAACATAGCTGC +
Preference number: 4 (lower is better)
Translates to: SQKKPEPSRQTGRGGSRDSLEGR*SLKHSC
Trigger: GCAGCTATGTTTAAGAGACCAGCGTCCTTCCAGGCT...ATCCCTGCTGCCTCCCCTACCCGTTTGACGACTTGGTTCTGGCTTTTTCTGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CCA 90 bp CTCTGGAATCCTGCGTGTCCGCTTCTTTCAGTGGCCAGAAGAGGAAAGCAGAGTAGCCTGGAAGGACGCTaGTCTCTTAAACATAGCTGC +
Preference number: 4 (lower is better)
Translates to: LWNPACPLLSVARRGKQSSLEGR*SLKHSC
Trigger: GCAGCTATGTTTAAGAGACCAGCGTCCTTCCAGGCT...ACTCTGCTTTCCTCTTCTGGCCACTGAAAGAAGCGGACACGCAGGATTCCAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR TCA 90 bp CACAACCCCATCAGCGTGGCGGAAAGAGCAGTCGGCAAGCACATCATACAAGGACAGTTTGCTCTTCATTaGGTGAGACGTGTCAATGAG +
Preference number: 4 (lower is better)
Translates to: HNPISVAERAVGKHIIQGQFALH*VRRVNE
Trigger: CTCATTGACACGTCTCACTCAATGAAGAGCAAACTG...TCCTTGTATGATGTGCTTGCCGACTGCTCTTTCCGCCACGCTGATGGGGTTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000422503.6
ENST00000432242.5
ENST00000448638.5
CDS-3UTR TCA 90 bp TGTCATCCAGCCACTCCTCAGCCAGCAAGATGCTCATTTCTTTGTCACTTAGAGACTGTTTCAGGTGGCTaGTCAGGTCTCCCATCGGTC +
Preference number: 4 (lower is better)
Translates to: CHPATPQPARCSFLCHLETVSGG*SGLPSV
Trigger: GACCGATGGGAGACCTGATCAGCCACCTGAAACAGT...CTCTAAGTGACAAAGAAATGAGCATCTTGCTGGCTGAGGAGTGGCTGGATGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000448638.5
ENST00000489630.5
CDS-3UTR TCA 90 bp CTCGTCTTGGCTCTCTGGAATCCTGCGTGTCCGCTTCTTTCAGTGGCCAGAAGATTCTCCAGATCACTGTaGCCCTGTTCCATTTCCTTA +
Preference number: 4 (lower is better)
Translates to: LVLALWNPACPLLSVARRFSRSL*PCSISL
Trigger: TAAGGAAATGGAACAGGGTCACAGTGATCTGGAGAA...TCTTCTGGCCACTGAAAGAAGCGGACACGCAGGATTCCAGAGAGCCAAGACGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000495571.5
CDS-3UTR TCA 90 bp CACAACCCCATCAGCGTGGCGGAAAGAGCAGTCGGCAAGCACATCATACAAGGAGAACAGATTTCCTTTTaGTGCTTGCTGTCTCCATCC +
Preference number: 4 (lower is better)
Translates to: HNPISVAERAVGKHIIQGEQISF*CLLSPS
Trigger: GGATGGAGACAGCAAGCATCAAAAGGAAATCTGTTC...TCCTTGTATGATGTGCTTGCCGACTGCTCTTTCCGCCACGCTGATGGGGTTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
CDS-3UTR TCA 90 bp ACAGTCAGAAAAAGCCAGAACCAAGTCGTCAAACGGGTAGGGGAGGCAGCAGGGGAACAGATTTCCTTTTaGTGCTTGCTGTCTCCATCC +
Preference number: 4 (lower is better)
Translates to: TVRKSQNQVVKRVGEAAGEQISF*CLLSPS
Trigger: GGATGGAGACAGCAAGCATCAAAAGGAAATCTGTTC...CCCTGCTGCCTCCCCTACCCGTTTGACGACTTGGTTCTGGCTTTTTCTGACTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
CDS-3UTR TCA 90 bp GACCTTAGACACGACATGCTTGTCCAGGACGGGAACATAGGTGGAGCTGTGCGGGAATCGACATCAGATTaGGGCTTTGCACACTTTTCT +
Preference number: 4 (lower is better)
Translates to: DLRHDMLVQDGNIGGAVRESTSD*GFAHFS
Trigger: AGAAAAGTGTGCAAAGCCTCAATCTGATGTCGATTC...CCGCACAGCTCCACCTATGTTCCCGTCCTGGACAAGCATGTCGTGTCTAAGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR TCA 90 bp CCAGAAGAGGAAAGCAGAGTTCCTCGCCTCCACATCCTCTACTTCTGGATCCTCTTCAGCTGTATGGAATaGAGGAAACAGCTCCAGAGC +
Preference number: 4 (lower is better)
Translates to: PEEESRVPRLHILYFWILFSCME*RKQLQS
Trigger: GCTCTGGAGCTGTTTCCTTCATTCCATACAGCTGAA...GAGGATCCAGAAGTAGAGGATGTGGAGGCGAGGAACTCTGCTTTCCTCTTCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000495571.5
CDS-3UTR TCA 90 bp GATCCTCAGGAATTGGGGGTGACTTTATATGAGAGCAAGAGAGCGCATACTTGTGTCAACGCTGAGGTCTaGACAGCCTGGAAGGACGCT +
Preference number: 4 (lower is better)
Translates to: DPQELGVTLYESKRAHTCVNAEV*TAWKDA
Trigger: AGCGTCCTTCCAGGCTGTTCAGACCTCAGCGTTGAC...ACAAGTATGCGCTCTCTTGCTCTCATATAAAGTCACCCCCAATTCCTGAGGATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR GCA 90 bp ACAGTCAGAAAAAGCCAGAACCAAGTCGTCAAACGGGTAGGGGAGGCAGCAGGGTCACCAAGTCCAGTTTaGTCTTCATTGAGTGAGACG +
Preference number: 4 (lower is better)
Translates to: TVRKSQNQVVKRVGEAAGSPSPV*SSLSET
Trigger: CGTCTCACTCAATGAAGAGCAAACTGGACTTGGTGA...CCCTGCTGCCTCCCCTACCCGTTTGACGACTTGGTTCTGGCTTTTTCTGACTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000477737.6
CDS-3UTR GCA 90 bp AGACACGACATGCTTGTCCAGGACGGGAACATAGGTGGAGCTGTGCGGGACTGCTTTCCTTTTGATGCTTaGTGTCTCCATCCTTTTCTG +
Preference number: 4 (lower is better)
Translates to: RHDMLVQDGNIGGAVRDCFPFDA*CLHPFL
Trigger: CAGAAAAGGATGGAGACAGCAAGCATCAAAAGGAAA...GCAGTCCCGCACAGCTCCACCTATGTTCCCGTCCTGGACAAGCATGTCGTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
ENST00000495571.5
CDS-3UTR GCA 90 bp CACCAGACGGCCTTAAAGTGTCTCAGGGACGCTCCTCAGCCCTTTGCTGCTGTGTTTCCTTTTGATGCTTaGTGTCTCCATCCTTTTCTG +
Preference number: 4 (lower is better)
Translates to: HQTALKCLRDAPQPFAAVFPFDA*CLHPFL
Trigger: CAGAAAAGGATGGAGACAGCAAGCATCAAAAGGAAA...CACAGCAGCAAAGGGCTGAGGAGCGTCCCTGAGACACTTTAAGGCCGTCTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000495571.5
CDS-3UTR GCA 90 bp AGATGCAATCATTATGCAATCTTCCAAAGAGGCTTTGACTCCCATCCTGTAGCCGAGCAGTCCTCCGGCTaGTGGCATTGGAGAGGCCAT +
Preference number: 4 (lower is better)
Translates to: RCNHYAIFQRGFDSHPVAEQSSG*WHWRGH
Trigger: ATGGCCTCTCCAATGCCAGCAGCCGGAGGACTGCTC...GGCTACAGGATGGGAGTCAAAGCCTCTTTGGAAGATTGCATAATGATTGCATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
CDS-3UTR GCA 90 bp AGTCAGAAAAAGCCAGAACCAAGTCGTCAAACGGGTAGGGGAGGCAGCAGGGATTGGAGTTCCATGGCCTaGTGGATGTACATTTTCCCA +
Preference number: 4 (lower is better)
Translates to: SQKKPEPSRQTGRGGSRDWSSMA*WMYIFP
Trigger: TGGGAAAATGTACATCCAGCAGGCCATGGAACTCCA...ATCCCTGCTGCCTCCCCTACCCGTTTGACGACTTGGTTCTGGCTTTTTCTGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR GCA 90 bp CTGAAGACACATCTGAAGAATCGTGGTCATAAACCTGGCTTCCTTCTCGCGTCACCACCAGTGCTTGGGTaGGGCTCACACACTTCTTCA +
Preference number: 4 (lower is better)
Translates to: LKTHLKNRGHKPGFLLASPPVLG*GSHTSS
Trigger: TGAAGAAGTGTGTGAGCCGCACCCAAGCACTGGTGG...TGACGCGAGAAGGAAGCCAGGTTTATGACCACGATTCTTCAGATGTGTCTTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR GCA 90 bp ATGGAACTCTCCTCCAGTCAAAGCAGCAACCTCTTTCAAAAACCTGTTTGCAATAGTACAGGGCAGGGCTaGTCGAGGTGGAGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: MELSSSQSSNLFQKPVCNSTGQG*SRWRCG
Trigger: GCCACACCTCCACCTCGAGCAGCCCTGCCCTGTACT...ATTGCAAACAGGTTTTTGAAAGAGGTTGCTGCTTTGACTGGAGGAGAGTTCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000495571.5
CDS-3UTR GCA 90 bp TCAAGGACTCAGAATAAAGGTCTTGCATCTTCTCCAGATCACTGTGACCCTGTTCGCTCCTCAGCCCTTTaGTGCTGTGGGTGGCTTGGA +
Preference number: 4 (lower is better)
Translates to: SRTQNKGLASSPDHCDPVRSSAL*CCGWLG
Trigger: TCCAAGCCACCCACAGCAGCAAAGGGCTGAGGAGCG...AACAGGGTCACAGTGATCTGGAGAAGATGCAAGACCTTTATTCTGAGTCCTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000495571.5
CDS-3UTR CCA 90 bp CCACTCATGCTGTCTTCAGCTGTATGGAATGAAGGAAACAGCTCCAGAGCGAGAATCTCCAAGGCCCTCTaGAGGAGAAGCTCCTTGGAT +
Preference number: 4 (lower is better)
Translates to: PLMLSSAVWNEGNSSRARISKAL*RRSSLD
Trigger: ATCCAAGGAGCTTCTCCTCCAGAGGGCCTTGGAGAT...TCTCGCTCTGGAGCTGTTTCCTTCATTCCATACAGCTGAAGACAGCATGAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422503.6
ENST00000432242.5
ENST00000433678.5
CDS-3UTR CCA 90 bp TTATATCCACAACCCCATCAGCGTGGCGGAAAGAGCAGTCGGCAAGCACATCATTCTGACTCCAGCTCCTaGAGGGAGTTTTCCTTTCAG +
Preference number: 4 (lower is better)
Translates to: LYPQPHQRGGKSSRQAHHSDSSS*REFSFQ
Trigger: CTGAAAGGAAAACTCCCTCCAGGAGCTGGAGTCAGA...ATGATGTGCTTGCCGACTGCTCTTTCCGCCACGCTGATGGGGTTGTGGATATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000422503.6
ENST00000432242.5
CDS-3UTR CCA 90 bp ATGGAACTCTCCTCCAGTCAAAGCAGCAACCTCTTTCAAAAACCTGTTTGCAATACCAGCCTCTGGATCTaGGCCAGCGTGCTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: MELSSSQSSNLFQKPVCNTSLWI*ASVLQA
Trigger: AGCCTGCAGCACGCTGGCCCAGATCCAGAGGCTGGT...ATTGCAAACAGGTTTTTGAAAGAGGTTGCTGCTTTGACTGGAGGAGAGTTCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000433678.5
ENST00000448638.5
CDS-3UTR CCA 90 bp CTTTTCTGCATTGTACCACCAGTCCATGATCAAGGACTCAGAATAAAGGTCTTGACCAGCCTCTGGATCTaGGCCAGCGTGCTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: LFCIVPPVHDQGLRIKVLTSLWI*ASVLQA
Trigger: AGCCTGCAGCACGCTGGCCCAGATCCAGAGGCTGGT...CAAGACCTTTATTCTGAGTCCTTGATCATGGACTGGTGGTACAATGCAGAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000433678.5
ENST00000448638.5
CDS-3UTR CCA 90 bp TCTTCTTGTTCGTCTCCGCACTGGTCTGCACGGACTCATTCTCCGGTTTGGCTTGTCCCAGGTGTCTTCTaGATTCGATGCAATCTCAAC +
Preference number: 4 (lower is better)
Translates to: SSCSSPHWSARTHSPVWLVPGVF*IRCNLN
Trigger: GTTGAGATTGCATCGAATCCAGAAGACACCTGGGAC...AAGCCAAACCGGAGAATGAGTCCGTGCAGACCAGTGCGGAGACGAACAAGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422503.6
CDS-3UTR CCA 90 bp CTCATGCTGTCTTCAGCTGTATGGAATGAAGGAAACAGCTCCAGAGCGAGAGACTGTTCGTCTCCGCACTaGTCTGCACGGACTCATTCT +
Preference number: 4 (lower is better)
Translates to: LMLSSAVWNEGNSSRARDCSSPH*SARTHS
Trigger: AGAATGAGTCCGTGCAGACCAGTGCGGAGACGAACA...GTCTCTCGCTCTGGAGCTGTTTCCTTCATTCCATACAGCTGAAGACAGCATGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422503.6
ENST00000433678.5
CDS-3UTR CCA 90 bp TCCGGTTTGGCTTTTATATCCACAACCCCATCAGCGTGGCGGAAAGAGCAGTCGTCCTTCCAGGGAGCATaGACAAACCTGCTGCAATAT +
Preference number: 4 (lower is better)
Translates to: SGLAFISTTPSAWRKEQSSFQGA*TNLLQY
Trigger: ATATTGCAGCAGGTTTGTCCATGCTCCCTGGAAGGA...CGACTGCTCTTTCCGCCACGCTGATGGGGTTGTGGATATAAAAGCCAAACCGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422503.6
CDS-3UTR CCA 90 bp TTTGACCTGGTCTATAACTGTTTCAGGTGGCTGATCAGGTCTCCCATCGGTCAGCAGCCTCTGGGGGAGTaGGATCCTTGCAACCAAAAT +
Preference number: 4 (lower is better)
Translates to: FDLVYNCFRWLIRSPIGQQPLGE*DPCNQN
Trigger: ATTTTGGTTGCAAGGATCCCACTCCCCCAGAGGCTG...CTGACCGATGGGAGACCTGATCAGCCACCTGAAACAGTTATAGACCAGGTCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416277.5
ENST00000448638.5
CDS-3UTR CCA 90 bp CCAGCTAGGATTTCACTTTCCAGCATCGACAGCTCTTTCAGTGAAATGGGCCAACTGAGGGAGGACATCTaGCTTCTGAGCAGGCTGGTT +
Preference number: 4 (lower is better)
Translates to: PARISLSSIDSSFSEMGQLREDI*LLSRLV
Trigger: AACCAGCCTGCTCAGAAGCCAGATGTCCTCCCTCAG...TTGGCCCATTTCACTGAAAGAGCTGTCGATGCTGGAAAGTGAAATCCTAGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR CCA 90 bp TCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCTGAACAGCCTGGAAGGTGTAGAATTTTTCTGTaGCCACATGCTTATTGGGAA +
Preference number: 4 (lower is better)
Translates to: SAEGPVSVSTLRSEQPGRCRIFL*PHAYWE
Trigger: TTCCCAATAAGCATGTGGCCACAGAAAAATTCTACA...CCTTCCAGGCTGTTCAGACCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
ENST00000495571.5
ENST00000614454.1
CDS-3UTR CCA 90 bp ATGAAAATGTCAGGAAACTATACAGTAGGGGATGTTCAGTCTTGCAGATCTCAGCCCTGGCAGGACCCATaGGAGCTGATGCCGTGGGAG +
Preference number: 4 (lower is better)
Translates to: MKMSGNYTVGDVQSCRSQPWQDP*ELMPWE
Trigger: CTCCCACGGCATCAGCTCCCATGGGTCCTGCCAGGG...CTGAGATCTGCAAGACTGAACATCCCCTACTGTATAGTTTCCTGACATTTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CCA 90 bp AAACGTTTGACCTGGTCTATAACTGTTTCAGGTGGAATGATACACATGACAGTCTCGGGGTGTGTCCCCTaGCAGGACCCATGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: KRLTWSITVSGGMIHMTVSGCVP*QDPWEL
Trigger: CAGCTCCCATGGGTCCTGCCAGGGGACACACCCCGA...GACTGTCATGTGTATCATTCCACCTGAAACAGTTATAGACCAGGTCAAACGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000495571.5
CDS-3UTR CCA 90 bp AGGGGATGTTCAGTCTTGCAGATCTCAGACAAGTTACCGAGTCTGAATTTCAGTCAGGGCTGCTCGAGGTaGAGGTGTGGCAATGATGGC +
Preference number: 4 (lower is better)
Translates to: RGCSVLQISDKLPSLNFSQGCSR*RCGNDG
Trigger: GCCATCATTGCCACACCTCCACCTCGAGCAGCCCTG...ACTGAAATTCAGACTCGGTAACTTGTCTGAGATCTGCAAGACTGAACATCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CCA 90 bp AACTATACAGTAGGGGATGTTCAGTCTTGCAGATCTCAGACAAGTTACCGAGTCCTGCTGTGGGTGGCTTaGAGAGTACAGGGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: NYTVGDVQSCRSQTSYRVLLWVA*RVQGRA
Trigger: AGCCCTGCCCTGTACTCTCCAAGCCACCCACAGCAG...GACTCGGTAACTTGTCTGAGATCTGCAAGACTGAACATCCCCTACTGTATAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
3UTR CAA 72 bp CCTTCCAGGGAGCATGGACAAACCTGCTGCAATATTTaGCATGGACTGTCTTCTTGTTCGTCTCCGCACTGG +
Preference number: 4 (lower is better)
Translates to: PSREHGQTCCNI*HGLSSCSSPHW
Trigger: CCAGTGCGGAGACGAACAAGAAGACAGTCCATGCAAAATATTGCAGCAGGTTTGTCCATGCTCCCTGGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422503.6
CDS-3UTR TCA 90 bp TTTCTGCAGCCATGTCTTAGAGTCCCAGGTGTCTTCTGGATTCGATGCAATCTCTTGAACTCGGTTATGTaGGCCACCTGCTCCTGGAGA +
Preference number: 4 (lower is better)
Translates to: FLQPCLRVPGVFWIRCNLLNSVM*ATCSWR
Trigger: TCTCCAGGAGCAGGTGGCTCACATAACCGAGTTCAA...GAGATTGCATCGAATCCAGAAGACACCTGGGACTCTAAGACATGGCTGCAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432242.5
CDS-3UTR TCA 90 bp TCTGGATTCGATGCAATCTCAACAGAGGTTGTTTCTGACTCGCAGTCCACAGTGCTTCTCCTCTGGCGTTaGAGGACACTGTGTAGACTG +
Preference number: 4 (lower is better)
Translates to: SGFDAISTEVVSDSQSTVLLLWR*RTLCRL
Trigger: CAGTCTACACAGTGTCCTTCAACGCCAGAGGAGAAG...CACTGTGGACTGCGAGTCAGAAACAACCTCTGTTGAGATTGCATCGAATCCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422503.6
ENST00000432242.5
CDS-3UTR TCA 90 bp TCCGGTTTGGCTTTTATATCCACAACCCCATCAGCGTGGCGGAAAGAGCAGTCGCAGTTTGCTCTTCATTaGGTGAGACGTGTCAATGAG +
Preference number: 4 (lower is better)
Translates to: SGLAFISTTPSAWRKEQSQFALH*VRRVNE
Trigger: CTCATTGACACGTCTCACTCAATGAAGAGCAAACTG...CGACTGCTCTTTCCGCCACGCTGATGGGGTTGTGGATATAAAAGCCAAACCGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000422503.6
ENST00000432242.5
ENST00000448638.5
CDS-3UTR TCA 90 bp TTTCTGCAGCCATGTCTTAGAGTCCCAGGTGTCTTCTGGATTCGATGCAATCTCAGGACATCTGGCTTCTaGGCAGGCTGGTTTTGGTTG +
Preference number: 4 (lower is better)
Translates to: FLQPCLRVPGVFWIRCNLRTSGF*AGWFWL
Trigger: CAACCAAAACCAGCCTGCTCAGAAGCCAGATGTCCT...GAGATTGCATCGAATCCAGAAGACACCTGGGACTCTAAGACATGGCTGCAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432242.5
CDS-3UTR TCA 90 bp AAGACACATCTGAAGAATCGTGGTCATAAACCTGGCTTCCTTCTCGCGTCACCTAGGACATCTGGCTTCTaGGCAGGCTGGTTTTGGTTG +
Preference number: 4 (lower is better)
Translates to: KTHLKNRGHKPGFLLASPRTSGF*AGWFWL
Trigger: CAACCAAAACCAGCCTGCTCAGAAGCCAGATGTCCT...AGGTGACGCGAGAAGGAAGCCAGGTTTATGACCACGATTCTTCAGATGTGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR TCA 90 bp GAGCAAGAGAGCGCATACTTGTTTTGGCTGATCTTAATAAGTGCACTCCGAGGGAGGACATCTGGCTTCTaGGCAGGCTGGTTTTGGTTG +
Preference number: 4 (lower is better)
Translates to: EQESAYLFWLILISALRGRTSGF*AGWFWL
Trigger: CAACCAAAACCAGCCTGCTCAGAAGCCAGATGTCCT...CCCTCGGAGTGCACTTATTAAGATCAGCCAAAACAAGTATGCGCTCTCTTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR TCA 90 bp TTGTCATCCAGCCACTCCTCAGCCAGCAAGATGCTCATTTCTTTGTCACTTAGACCTTTCACTGCAAGCTaGGCTCCTGAGGGAGGACAT +
Preference number: 4 (lower is better)
Translates to: LSSSHSSASKMLISLSLRPFTAS*APEGGH
Trigger: ATGTCCTCCCTCAGGAGCTCAGCTTGCAGTGAAAGG...TCTAAGTGACAAAGAAATGAGCATCTTGCTGGCTGAGGAGTGGCTGGATGACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR TCA 90 bp GGATTGAATTGCCTGTTCCACTTTTCGCTTGTAGATATTGAGTTTGGCTCCTTGCGGGACTGCTGCCACTaGCAAGGCATCCATGAGGGT +
Preference number: 4 (lower is better)
Translates to: GLNCLFHFSLVDIEFGSLRDCCH*QGIHEG
Trigger: ACCCTCATGGATGCCTTGTCAGTGGCAGCAGTCCCG...CAAGGAGCCAAACTCAATATCTACAAGCGAAAAGTGGAACAGGCAATTCAATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR TCA 90 bp ACAGACTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCTGAACAGCCTTTTTCTTTTTCCTCTTaGGATAATGCTCGCCAAACA +
Preference number: 4 (lower is better)
Translates to: TDSAEGPVSVSTLRSEQPFSFSS*DNARQT
Trigger: TGTTTGGCGAGCATTATCTCAAGAGGAAAAAGAAAA...AGGCTGTTCAGACCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGTCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000495571.5
ENST00000614454.1
CDS-3UTR TCA 90 bp TTGGCTTTTATATCCACAACCCCATCAGCGTGGCGGAAAGAGCAGTCGGCAAGCATGTCCTGTCTAATGTaGGTTTCCTCATCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: LAFISTTPSAWRKEQSASMSCLM*VSSSVA
Trigger: AGCCACAGATGAGGAAACTCACATTAGACAGGACAT...GCTTGCCGACTGCTCTTTCCGCCACGCTGATGGGGTTGTGGATATAAAAGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422503.6
ENST00000432242.5
CDS-3UTR GCA 90 bp ATTTCTGTTGCTCTCCCGGGGCCTTGTTTGCATAATTCTTCTTGGCAGCCTCCTTCTTGCCTCTGCAGCTaGTGCTCAGAGATGGTAGAA +
Preference number: 4 (lower is better)
Translates to: ISVALPGPCLHNSSWQPPSCLCS*CSEMVE
Trigger: TTCTACCATCTCTGAGCAGCAGCTGCAGAGGCAAGA...AGGAGGCTGCCAAGAAGAATTATGCAAACAAGGCCCCGGGAGAGCAACAGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432242.5
CDS-3UTR GCA 90 bp AAAGAGTCAGATCTTCATTCTGAACAGCCTCTGGGGGAGTGGGATCCTTGCAACTCTTGCCTCTGCAGCTaGTGCTCAGAGATGGTAGAA +
Preference number: 4 (lower is better)
Translates to: KESDLHSEQPLGEWDPCNSCLCS*CSEMVE
Trigger: TTCTACCATCTCTGAGCAGCAGCTGCAGAGGCAAGA...GTTGCAAGGATCCCACTCCCCCAGAGGCTGTTCAGAATGAAGATCTGACTCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000433678.5
ENST00000448638.5
CDS-3UTR GCA 90 bp TTTGACCTGGTCTATAACTGTTTCAGGTGGCTGATCAGGTCTCCCATCGGTCAGTTAATCCATCCCTCTTaGCTCTGCAGCTGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: FDLVYNCFRWLIRSPIGQLIHPS*LCSCCS
Trigger: TGAGCAGCAGCTGCAGAGGCAAGAGGGATGGATTAA...CTGACCGATGGGAGACCTGATCAGCCACCTGAAACAGTTATAGACCAGGTCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416277.5
ENST00000448638.5
CDS-3UTR GCA 90 bp GGTCTGAACAGCCTGGAAGGACGCTGGTCTCTTAAACATAGCTGCCACCAGACGGATGAAATGAGACTCTaGTCAGCCAAGTCTGTTTTG +
Preference number: 4 (lower is better)
Translates to: GLNSLEGRWSLKHSCHQTDEMRL*SAKSVL
Trigger: CAAAACAGACTTGGCTGAGCAGAGTCTCATTTCATC...CGTCTGGTGGCAGCTATGTTTAAGAGACCAGCGTCCTTCCAGGCTGTTCAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000477737.6
CDS-3UTR GCA 90 bp CAAGGACTCAGAATAAAGGTCTTGCATCTTCTCCAGATCACTGTGACCCTGTTCGCTCCCCCTCCAGAATaGCGCCAAAATCCAGCACTA +
Preference number: 4 (lower is better)
Translates to: QGLRIKVLHLLQITVTLFAPPPE*RQNPAL
Trigger: TAGTGCTGGATTTTGGCGGCATTCTGGAGGGGGAGC...GAACAGGGTCACAGTGATCTGGAGAAGATGCAAGACCTTTATTCTGAGTCCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000433678.5
ENST00000448638.5
CDS-3UTR GCA 90 bp AGAATAAAGGTCTTGCATCTTCTCCAGATCACTGTGACCCTGTTCCATTTCCTTGGATCTGGGCCAGCGTaGTGCAGGCTTCCTCCATCT +
Preference number: 4 (lower is better)
Translates to: RIKVLHLLQITVTLFHFLGSGPA*CRLPPS
Trigger: AGATGGAGGAAGCCTGCAGCACGCTGGCCCAGATCC...AAGGAAATGGAACAGGGTCACAGTGATCTGGAGAAGATGCAAGACCTTTATTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000433678.5
ENST00000448638.5
CDS-3UTR GCA 90 bp GGTCTGAACAGCCTGGAAGGACGCTGGTCTCTTAAACATAGCTGCCACCAGACGCATGGACAAACCTGCTaGAATATTTTGCATGGACTG +
Preference number: 4 (lower is better)
Translates to: GLNSLEGRWSLKHSCHQTHGQTC*NILHGL
Trigger: CAGTCCATGCAAAATATTGCAGCAGGTTTGTCCATG...CGTCTGGTGGCAGCTATGTTTAAGAGACCAGCGTCCTTCCAGGCTGTTCAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477737.6
CDS-3UTR GCA 90 bp CTTTCAGTGGCCAGAAGAGGAAAGCAGAGTTCCTCGCCTCCACATCCTCTACTTTTCCCGCCAAGCAACTaGTTGACCATCAAACTTCAC +
Preference number: 4 (lower is better)
Translates to: LSVARRGKQSSSPPHPLLFPPSN*LTIKLH
Trigger: GTGAAGTTTGATGGTCAAGCAGTTGCTTGGCGGGAA...AAGTAGAGGATGTGGAGGCGAGGAACTCTGCTTTCCTCTTCTGGCCACTGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000495571.5
CDS-3UTR GCA 90 bp GGCCTTGTTTGCATAATTCTTCTTGGCAGCCTCCTGGAGTTCCATGGCCTGCTGGTCTCCATCCTTTTCTaGATTGTACCACCAGTCCAT +
Preference number: 4 (lower is better)
Translates to: GLVCIILLGSLLEFHGLLVSILF*IVPPVH
Trigger: ATGGACTGGTGGTACAATGCAGAAAAGGATGGAGAC...CAGCAGGCCATGGAACTCCAGGAGGCTGCCAAGAAGAATTATGCAAACAAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000495571.5
CDS-3UTR GCA 90 bp CTTTTCTGCATTGTACCACCAGTCCATGATCAAGGACTCAGAATAAAGGTCTTGGAGCAGTCCTCCGGCTaGTGGCATTGGAGAGGCCAT +
Preference number: 4 (lower is better)
Translates to: LFCIVPPVHDQGLRIKVLEQSSG*WHWRGH
Trigger: ATGGCCTCTCCAATGCCAGCAGCCGGAGGACTGCTC...CAAGACCTTTATTCTGAGTCCTTGATCATGGACTGGTGGTACAATGCAGAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
ENST00000495571.5
CDS-3UTR GCA 90 bp GAGCAAGAGAGCGCATACTTGTTTTGGCTGATCTTAATAAGTGCACTCCGAGGGGTCGTTGCACACATGTaGCAGAGGGAACACCTCATC +
Preference number: 4 (lower is better)
Translates to: EQESAYLFWLILISALRGVVAHM*QREHLI
Trigger: GATGAGGTGTTCCCTCTGGCACATGTGTGCAACGAC...CCCTCGGAGTGCACTTATTAAGATCAGCCAAAACAAGTATGCGCTCTCTTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR GCA 90 bp CTTTGGGTATCACAATTTTGGCAAACACATAATCTCCAACCTGGAGCAGCGGGCGTCGTTGCACACATGTaGCAGAGGGAACACCTCATC +
Preference number: 4 (lower is better)
Translates to: LWVSQFWQTHNLQPGAAGVVAHM*QREHLI
Trigger: GATGAGGTGTTCCCTCTGGCACATGTGTGCAACGAC...GCCCGCTGCTCCAGGTTGGAGATTATGTGTTTGCCAAAATTGTGATACCCAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR GCA 90 bp GGTCTGAACAGCCTGGAAGGACGCTGGTCTCTTAAACATAGCTGCCACCAGACGTTTTCTGTGGCCACATaGTTATTGGGAAGTGCTATG +
Preference number: 4 (lower is better)
Translates to: GLNSLEGRWSLKHSCHQTFSVAT*LLGSAM
Trigger: CATAGCACTTCCCAATAAGCATGTGGCCACAGAAAA...CGTCTGGTGGCAGCTATGTTTAAGAGACCAGCGTCCTTCCAGGCTGTTCAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
ENST00000495571.5
ENST00000614454.1
CDS-3UTR GCA 90 bp CAGAGGGAACACCTCATCAAAGACCTTAGACACGACATGCTTGTCCAGGACGGGTCTCTTAAACATAGCTaGCACCAGACGGCCTTAAAG +
Preference number: 4 (lower is better)
Translates to: QREHLIKDLRHDMLVQDGSLKHS*HQTALK
Trigger: CTTTAAGGCCGTCTGGTGGCAGCTATGTTTAAGAGA...CCCGTCCTGGACAAGCATGTCGTGTCTAAGGTCTTTGATGAGGTGTTCCCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR GCA 90 bp TTAGAGTTACCTACAACAGACTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGTTCGTGGCCATTGTGTaGTTCAGTGTGATAGTAGCT +
Preference number: 4 (lower is better)
Translates to: LELPTTDSAEGPVSVSTLFVAIV*FSVIVA
Trigger: AGCTACTATCACACTGAAGCACACAATGGCCACGAA...CAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGTCTGTTGTAGGTAACTCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614454.1
CDS-3UTR CCA 90 bp AGAATAAAGGTCTTGCATCTTCTCCAGATCACTGTGACCCTGTTCCATTTCCTTAGGCAATATGTCGGGTaGAAGACGTGGCGGCTCCCG +
Preference number: 4 (lower is better)
Translates to: RIKVLHLLQITVTLFHFLRQYVG*KTWRLP
Trigger: CGGGAGCCGCCACGTCTTCCACCCGACATATTGCCT...AAGGAAATGGAACAGGGTCACAGTGATCTGGAGAAGATGCAAGACCTTTATTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000433678.5
ENST00000448638.5
CDS-3UTR CCA 90 bp TCTGGATTCGATGCAATCTCAACAGAGGTTGTTTCTGACTCGCAGTCCACAGTGATCTCCAAGGCCCTCTaGAGGAGAAGCTCCTTGGAT +
Preference number: 4 (lower is better)
Translates to: SGFDAISTEVVSDSQSTVISKAL*RRSSLD
Trigger: ATCCAAGGAGCTTCTCCTCCAGAGGGCCTTGGAGAT...CACTGTGGACTGCGAGTCAGAAACAACCTCTGTTGAGATTGCATCGAATCCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422503.6
ENST00000432242.5
CDS-3UTR CCA 90 bp CTCATGCTGTCTTCAGCTGTATGGAATGAAGGAAACAGCTCCAGAGCGAGAGACTCTGACTCCAGCTCCTaGAGGGAGTTTTCCTTTCAG +
Preference number: 4 (lower is better)
Translates to: LMLSSAVWNEGNSSRARDSDSSS*REFSFQ
Trigger: CTGAAAGGAAAACTCCCTCCAGGAGCTGGAGTCAGA...GTCTCTCGCTCTGGAGCTGTTTCCTTCATTCCATACAGCTGAAGACAGCATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422503.6
ENST00000432242.5
ENST00000433678.5
CDS-3UTR CCA 90 bp CTTTATGTCTCTAATCCAGGACTGAGCCTGTTCCAAATTATCTTCATTGACTTCTCGGCCACCAGCCTCTaGATCTGGGCCAGCGTGCTG +
Preference number: 4 (lower is better)
Translates to: LYVSNPGLSLFQIIFIDFSATSL*IWASVL
Trigger: CAGCACGCTGGCCCAGATCCAGAGGCTGGTGGCCGA...GAAGTCAATGAAGATAATTTGGAACAGGCTCAGTCCTGGATTAGAGACATAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000422503.6
ENST00000432242.5
ENST00000448638.5
CDS-3UTR CCA 90 bp ATAAAAATGGAACTCTCCTCCAGTCAAAGCAGCAACCTCTTTCAAAAACCTGTTTCGGCCACCAGCCTCTaGATCTGGGCCAGCGTGCTG +
Preference number: 4 (lower is better)
Translates to: IKMELSSSQSSNLFQKPVSATSL*IWASVL
Trigger: CAGCACGCTGGCCCAGATCCAGAGGCTGGTGGCCGA...AACAGGTTTTTGAAAGAGGTTGCTGCTTTGACTGGAGGAGAGTTCCATTTTTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000433678.5
ENST00000448638.5
CDS-3UTR CCA 90 bp TCAAGGACTCAGAATAAAGGTCTTGCATCTTCTCCAGATCACTGTGACCCTGTTACAACCCCATCAGCGTaGCGGAAAGAGCAGTCGGCA +
Preference number: 4 (lower is better)
Translates to: SRTQNKGLASSPDHCDPVTTPSA*RKEQSA
Trigger: TGCCGACTGCTCTTTCCGCCACGCTGATGGGGTTGT...AACAGGGTCACAGTGATCTGGAGAAGATGCAAGACCTTTATTCTGAGTCCTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000433678.5
ENST00000448638.5
CDS-3UTR CCA 90 bp TGGCCAGAAGAGGAAAGCAGAGTTCCTCGCCTCCACATCCTCTACTTCTGGATCTATAACTGTTTCAGGTaGCTGATCAGGTCTCCCATC +
Preference number: 4 (lower is better)
Translates to: WPEEESRVPRLHILYFWIYNCFR*LIRSPI
Trigger: GATGGGAGACCTGATCAGCCACCTGAAACAGTTATA...GATCCAGAAGTAGAGGATGTGGAGGCGAGGAACTCTGCTTTCCTCTTCTGGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489630.5
CDS-3UTR CCA 90 bp CTGTGGGTCTTGGCACTCAGATCCTTTAGAAAAGCTATAGTGCCTTCTCCTCTGATTCTGAACAGCCTCTaGGGGAGTGGGATCCTTGCA +
Preference number: 4 (lower is better)
Translates to: LWVLALRSFRKAIVPSPLILNSL*GSGILA
Trigger: TGCAAGGATCCCACTCCCCCAGAGGCTGTTCAGAAT...CAGAGGAGAAGGCACTATAGCTTTTCTAAAGGATCTGAGTGCCAAGACCCACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432242.5
CDS-3UTR CCA 90 bp TTGTCATCCAGCCACTCCTCAGCCAGCAAGATGCTCATTTCTTTGTCACTTAGACTGAGGGAGGACATCTaGCTTCTGAGCAGGCTGGTT +
Preference number: 4 (lower is better)
Translates to: LSSSHSSASKMLISLSLRLREDI*LLSRLV
Trigger: AACCAGCCTGCTCAGAAGCCAGATGTCCTCCCTCAG...TCTAAGTGACAAAGAAATGAGCATCTTGCTGGCTGAGGAGTGGCTGGATGACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR CCA 90 bp AATGGAACTCTCCTCCAGTCAAAGCAGCAACCTCTTTCAAAAACCTGTTTGCAACAGTCCTCCGGCTGCTaGCATTGGAGAGGCCATCCT +
Preference number: 4 (lower is better)
Translates to: NGTLLQSKQQPLSKTCLQQSSGC*HWRGHP
Trigger: AGGATGGCCTCTCCAATGCCAGCAGCCGGAGGACTG...TTGCAAACAGGTTTTTGAAAGAGGTTGCTGCTTTGACTGGAGGAGAGTTCCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
ENST00000495571.5
CDS-3UTR CCA 90 bp CTTTTCTGCATTGTACCACCAGTCCATGATCAAGGACTCAGAATAAAGGTCTTGGGACGGGAACATAGGTaGAGCTGTGCGGGACTGCTG +
Preference number: 4 (lower is better)
Translates to: LFCIVPPVHDQGLRIKVLGREHR*SCAGLL
Trigger: CAGCAGTCCCGCACAGCTCCACCTATGTTCCCGTCC...CAAGACCTTTATTCTGAGTCCTTGATCATGGACTGGTGGTACAATGCAGAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
ENST00000495571.5
CDS-3UTR CCA 90 bp GGGTTAATTAATGTCATCTTATTTGTGTCGTTGCACACATGTGCCAGAGGGAACGGACGGGAACATAGGTaGAGCTGTGCGGGACTGCTG +
Preference number: 4 (lower is better)
Translates to: GLINVILFVSLHTCARGNGREHR*SCAGLL
Trigger: CAGCAGTCCCGCACAGCTCCACCTATGTTCCCGTCC...GTTCCCTCTGGCACATGTGTGCAACGACACAAATAAGATGACATTAATTAACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR CCA 90 bp GGTCTGAACAGCCTGGAAGGACGCTGGTCTCTTAAACATAGCTGCCACCAGACGGCTCTTTCAGTGAAATaGGCCAATTCAACCGTTCTA +
Preference number: 4 (lower is better)
Translates to: GLNSLEGRWSLKHSCHQTALSVK*ANSTVL
Trigger: TAGAACGGTTGAATTGGCCCATTTCACTGAAAGAGC...CGTCTGGTGGCAGCTATGTTTAAGAGACCAGCGTCCTTCCAGGCTGTTCAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
ENST00000495571.5
ENST00000614454.1
CDS-3UTR CCA 90 bp TATAAAAATGGAACTCTCCTCCAGTCAAAGCAGCAACCTCTTTCAAAAACCTGTCACCGCAGTCCACAGTaGCCACGTCGGGCTTGGGAG +
Preference number: 4 (lower is better)
Translates to: YKNGTLLQSKQQPLSKTCHRSPQ*PRRAWE
Trigger: CTCCCAAGCCCGACGTGGCCACTGTGGACTGCGGTG...ACAGGTTTTTGAAAGAGGTTGCTGCTTTGACTGGAGGAGAGTTCCATTTTTATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000416277.5
CDS-3UTR CCA 90 bp GCTGTATGGAATGAAGGAAACAGCTCCAGAGCGAGAGACTTGGGCTTGAAGCTCGAGTTTCCTCATCTGTaGCTCAGAACTGATACTCCC +
Preference number: 4 (lower is better)
Translates to: AVWNEGNSSRARDLGLKLEFPHL*LRTDTP
Trigger: GGGAGTATCAGTTCTGAGCCACAGATGAGGAAACTC...GAGCTTCAAGCCCAAGTCTCTCGCTCTGGAGCTGTTTCCTTCATTCCATACAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000422503.6
ENST00000432242.5
ENST00000433678.5
ENST00000495571.5
CDS-3UTR CCA 90 bp TGGCCAGAAGAGGAAAGCAGAGTTCCTCGCCTCCACATCCTCTACTTCTGGATCCTGTCTTCAGCTGTATaGAATGAAGGAAACAGCTCC +
Preference number: 4 (lower is better)
Translates to: WPEEESRVPRLHILYFWILSSAV*NEGNSS
Trigger: GGAGCTGTTTCCTTCATTCCATACAGCTGAAGACAG...GATCCAGAAGTAGAGGATGTGGAGGCGAGGAACTCTGCTTTCCTCTTCTGGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000495571.5
CDS-3UTR CCA 90 bp ACAGACTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCTGAACAGCCTTGTAGAATTTTTCTGTaGCCACATGCTTATTGGGAA +
Preference number: 4 (lower is better)
Translates to: TDSAEGPVSVSTLRSEQPCRIFL*PHAYWE
Trigger: TTCCCAATAAGCATGTGGCCACAGAAAAATTCTACA...AGGCTGTTCAGACCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGTCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000495571.5
ENST00000614454.1
CDS-3UTR CCA 90 bp CCACTCATGCTGTCTTCAGCTGTATGGAATGAAGGAAACAGCTCCAGAGCGAGAGTCCGCTTCTTTCAGTaGCCAGAAGAGGAAAGCAGA +
Preference number: 4 (lower is better)
Translates to: PLMLSSAVWNEGNSSRARVRFFQ*PEEESR
Trigger: TCTGCTTTCCTCTTCTGGCCACTGAAAGAAGCGGAC...TCTCGCTCTGGAGCTGTTTCCTTCATTCCATACAGCTGAAGACAGCATGAGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000495571.5
CDS-3UTR CCA 90 bp TTGTTTTCCAAGTACTGTATTGGTTTGTTTGCATCTAACCTGATTCAGAATGCTGCGGGGAAGTGGAGGTaGGCTGTCCTGGGCTCGGGG +
Preference number: 4 (lower is better)
Translates to: LFSKYCIGLFASNLIQNAAGKWR*AVLGSG
Trigger: CCCCGAGCCCAGGACAGCCCACCTCCACTTCCCCGC...AGCATTCTGAATCAGGTTAGATGCAAACAAACCAATACAGTACTTGGAAAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432242.5
3UTR CAA 72 bp TTCCTTGCAATTTCTGTTGCTCTCCCGGGGCCTTGTTaGCATAATTCTTCTTGGCAGCCTCCTGGAGTTCCA +
Preference number: 4 (lower is better)
Translates to: FLAISVALPGPC*HNSSWQPPGVP
Trigger: TGGAACTCCAGGAGGCTGCCAAGAAGAATTATGCAAACAAGGCCCCGGGAGAGCAACAGAAATTGCAAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR TCA 90 bp TCCGGTTTGGCTTTTATATCCACAACCCCATCAGCGTGGCGGAAAGAGCAGTCGTTAAGCCCATGCAGTTaGAGCCATTTCTCAGATGAA +
Preference number: 4 (lower is better)
Translates to: SGLAFISTTPSAWRKEQSLSPCS*SHFSDE
Trigger: TTCATCTGAGAAATGGCTTCAACTGCATGGGCTTAA...CGACTGCTCTTTCCGCCACGCTGATGGGGTTGTGGATATAAAAGCCAAACCGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000422503.6
ENST00000432242.5
ENST00000448638.5
CDS-3UTR TCA 90 bp ACAACCCCATCAGCGTGGCGGAAAGAGCAGTCGGCAAGCACATCATACAAGGATTGGGAATCCGATCTGTaGCAAAATCTGTTTCAAGGT +
Preference number: 4 (lower is better)
Translates to: TTPSAWRKEQSASTSYKDWESDL*QNLFQG
Trigger: ACCTTGAAACAGATTTTGTCACAGATCGGATTCCCA...ATCCTTGTATGATGTGCTTGCCGACTGCTCTTTCCGCCACGCTGATGGGGTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000422503.6
ENST00000432242.5
ENST00000448638.5
CDS-3UTR TCA 90 bp GATCAGGTCTCCCATCGGTCAGAAGGTAGATTGCCTGTGTTTCTTTATCAGCAACGCACTGTTCCAAGATaGCACCAAAAATCTGCCGGC +
Preference number: 4 (lower is better)
Translates to: DQVSHRSEGRLPVFLYQQRTVPR*HQKSAG
Trigger: GCCGGCAGATTTTTGGTGTCATCTTGGAACAGTGCG...TTGCTGATAAAGAAACACAGGCAATCTACCTTCTGACCGATGGGAGACCTGATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
CDS-3UTR TCA 90 bp GATCAAGGACTCAGAATAAAGGTCTTGCATCTTCTCCAGATCACTGTGACCCTGTTGAACTCGGTTATGTaGGCCACCTGCTCCTGGAGA +
Preference number: 4 (lower is better)
Translates to: DQGLRIKVLHLLQITVTLLNSVM*ATCSWR
Trigger: TCTCCAGGAGCAGGTGGCTCACATAACCGAGTTCAA...CAGGGTCACAGTGATCTGGAGAAGATGCAAGACCTTTATTCTGAGTCCTTGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000433678.5
ENST00000448638.5
CDS-3UTR TCA 90 bp CTTTTCTGCATTGTACCACCAGTCCATGATCAAGGACTCAGAATAAAGGTCTTGGAAACACGTCCTCTCTaGCTCCAGCTCCTGGAGGGA +
Preference number: 4 (lower is better)
Translates to: LFCIVPPVHDQGLRIKVLETRPL*LQLLEG
Trigger: TCCCTCCAGGAGCTGGAGTCAGAGAGGACGTGTTTC...CAAGACCTTTATTCTGAGTCCTTGATCATGGACTGGTGGTACAATGCAGAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000433678.5
CDS-3UTR TCA 90 bp TCCGGTTTGGCTTTTATATCCACAACCCCATCAGCGTGGCGGAAAGAGCAGTCGTGTTCCTGTATGAACTaGATGATCTTGTCCTTCACC +
Preference number: 4 (lower is better)
Translates to: SGLAFISTTPSAWRKEQSCSCMN*MILSFT
Trigger: GGTGAAGGACAAGATCATTCAGTTCATACAGGAACA...CGACTGCTCTTTCCGCCACGCTGATGGGGTTGTGGATATAAAAGCCAAACCGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000422503.6
ENST00000432242.5
ENST00000448638.5
CDS-3UTR TCA 90 bp CACAACCCCATCAGCGTGGCGGAAAGAGCAGTCGGCAAGCACATCATACAAGGACCAAATTATCTTCATTaGCTTCAGCAAGTTGTTCCC +
Preference number: 4 (lower is better)
Translates to: HNPISVAERAVGKHIIQGPNYLH*LQQVVP
Trigger: GGGAACAACTTGCTGAAGTCAATGAAGATAATTTGG...TCCTTGTATGATGTGCTTGCCGACTGCTCTTTCCGCCACGCTGATGGGGTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000422503.6
ENST00000432242.5
ENST00000448638.5
CDS-3UTR TCA 90 bp ACAGTCAGAAAAAGCCAGAACCAAGTCGTCAAACGGGTAGGGGAGGCAGCAGGGCCAAATTATCTTCATTaGCTTCAGCAAGTTGTTCCC +
Preference number: 4 (lower is better)
Translates to: TVRKSQNQVVKRVGEAAGPNYLH*LQQVVP
Trigger: GGGAACAACTTGCTGAAGTCAATGAAGATAATTTGG...CCCTGCTGCCTCCCCTACCCGTTTGACGACTTGGTTCTGGCTTTTTCTGACTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000477737.6
CDS-3UTR TCA 90 bp GAAAGGCCCCATGGTCCCTTCAACATATTCAGAGATGAAGTTTGTGTTGAATCGACTGTTTCAGGTGGCTaGTCAGGTCTCCCATCGGTC +
Preference number: 4 (lower is better)
Translates to: ERPHGPFNIFRDEVCVESTVSGG*SGLPSV
Trigger: GACCGATGGGAGACCTGATCAGCCACCTGAAACAGT...CGATTCAACACAAACTTCATCTCTGAATATGTTGAAGGGACCATGGGGCCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000448638.5
ENST00000489630.5
CDS-3UTR TCA 90 bp CTGAAGACACATCTGAAGAATCGTGGTCATAAACCTGGCTTCCTTCTCGCGTCACTGAACCTTTTGATCTaGAAGGCCCCATGGTCCCTT +
Preference number: 4 (lower is better)
Translates to: LKTHLKNRGHKPGFLLASLNLLI*KAPWSL
Trigger: AAGGGACCATGGGGCCTTTCAGATCAAAAGGTTCAG...TGACGCGAGAAGGAAGCCAGGTTTATGACCACGATTCTTCAGATGTGTCTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR TCA 90 bp CCACCAGTCCATGATCAAGGACTCAGAATAAAGGTCTTGCATCTTCTCCAGATCAGGACATCTGGCTTCTaGGCAGGCTGGTTTTGGTTG +
Preference number: 4 (lower is better)
Translates to: PPVHDQGLRIKVLHLLQIRTSGF*AGWFWL
Trigger: CAACCAAAACCAGCCTGCTCAGAAGCCAGATGTCCT...GATCTGGAGAAGATGCAAGACCTTTATTCTGAGTCCTTGATCATGGACTGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
ENST00000495571.5
CDS-3UTR TCA 90 bp TGTCATCCAGCCACTCCTCAGCCAGCAAGATGCTCATTTCTTTGTCACTTAGAGTCGCGTCACCTTTTCTaGCGATTTGTCATCCAGCCA +
Preference number: 4 (lower is better)
Translates to: CHPATPQPARCSFLCHLESRHLF*RFVIQP
Trigger: TGGCTGGATGACAAATCGTCAGAAAAGGTGACGCGA...CTCTAAGTGACAAAGAAATGAGCATCTTGCTGGCTGAGGAGTGGCTGGATGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR TCA 90 bp GATGAAGGAGGTGGACACGACCTTGGTGTCTCCGTAACTGAAGCCCACCAGTGCTTTTCTTTTTCCTCTTaGGATAATGCTCGCCAAACA +
Preference number: 4 (lower is better)
Translates to: DEGGGHDLGVSVTEAHQCFSFSS*DNARQT
Trigger: TGTTTGGCGAGCATTATCTCAAGAGGAAAAAGAAAA...GCACTGGTGGGCTTCAGTTACGGAGACACCAAGGTCGTGTCCACCTCCTTCATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR TCA 90 bp CTTTCAGTGGCCAGAAGAGGAAAGCAGAGTTCCTCGCCTCCACATCCTCTACTTATGTCCTGTCTAATGTaGGTTTCCTCATCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: LSVARRGKQSSSPPHPLLMSCLM*VSSSVA
Trigger: AGCCACAGATGAGGAAACTCACATTAGACAGGACAT...AAGTAGAGGATGTGGAGGCGAGGAACTCTGCTTTCCTCTTCTGGCCACTGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000495571.5
CDS-3UTR TCA 90 bp GCTGTATGGAATGAAGGAAACAGCTCCAGAGCGAGAGACTTGGGCTTGAAGCTCCTCAGGAATTGGGGGTaGCTTTATATGAGAGCAAGA +
Preference number: 4 (lower is better)
Translates to: AVWNEGNSSRARDLGLKLLRNWG*LYMRAR
Trigger: TCTTGCTCTCATATAAAGTCACCCCCAATTCCTGAG...GAGCTTCAAGCCCAAGTCTCTCGCTCTGGAGCTGTTTCCTTCATTCCATACAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000495571.5
CDS-3UTR GCA 90 bp AAGACACATCTGAAGAATCGTGGTCATAAACCTGGCTTCCTTCTCGCGTCACCTTCTTGCCTCTGCAGCTaGTGCTCAGAGATGGTAGAA +
Preference number: 4 (lower is better)
Translates to: KTHLKNRGHKPGFLLASPSCLCS*CSEMVE
Trigger: TTCTACCATCTCTGAGCAGCAGCTGCAGAGGCAAGA...AGGTGACGCGAGAAGGAAGCCAGGTTTATGACCACGATTCTTCAGATGTGTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
CDS-3UTR GCA 90 bp TCCGGTTTGGCTTTTATATCCACAACCCCATCAGCGTGGCGGAAAGAGCAGTCGGTCTTCTGGATTCGATaGAATCTCAACAGAGGTTGT +
Preference number: 4 (lower is better)
Translates to: SGLAFISTTPSAWRKEQSVFWIR*NLNRGC
Trigger: ACAACCTCTGTTGAGATTGCATCGAATCCAGAAGAC...CGACTGCTCTTTCCGCCACGCTGATGGGGTTGTGGATATAAAAGCCAAACCGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000422503.6
ENST00000432242.5
ENST00000448638.5
CDS-3UTR GCA 90 bp AAAGAGTCAGATCTTCATTCTGAACAGCCTCTGGGGGAGTGGGATCCTTGCAACTTCCCGCCAAGCAACTaGTTGACCATCAAACTTCAC +
Preference number: 4 (lower is better)
Translates to: KESDLHSEQPLGEWDPCNFPPSN*LTIKLH
Trigger: GTGAAGTTTGATGGTCAAGCAGTTGCTTGGCGGGAA...GTTGCAAGGATCCCACTCCCCCAGAGGCTGTTCAGAATGAAGATCTGACTCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000433678.5
ENST00000448638.5
ENST00000495571.5
CDS-3UTR GCA 90 bp TTGGCTCCTTGGGGGTTAATTAATGTCATCTTATTTGTGTCGTTGCACACATGTGAGCAGTCCTCCGGCTaGTGGCATTGGAGAGGCCAT +
Preference number: 4 (lower is better)
Translates to: LAPWGLINVILFVSLHTCEQSSG*WHWRGH
Trigger: ATGGCCTCTCCAATGCCAGCAGCCGGAGGACTGCTC...ACATGTGTGCAACGACACAAATAAGATGACATTAATTAACCCCCAAGGAGCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR GCA 90 bp ATTAGAGTTACCTACAACAGACTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTTCTTATTTGTGTCGTTaGACACATGTGCCAGAGGGA +
Preference number: 4 (lower is better)
Translates to: IRVTYNRLRGGASFSVNASYLCR*THVPEG
Trigger: TCCCTCTGGCACATGTGTGCAACGACACAAATAAGA...AGCGTTGACACTGAAACTGGCCCCTCCGCGGAGTCTGTTGTAGGTAACTCTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495571.5
ENST00000614454.1
CDS-3UTR GCA 90 bp AAAGAGTCAGATCTTCATTCTGAACAGCCTCTGGGGGAGTGGGATCCTTGCAACAGTCTCTCCCACTCATaGTGTCTTCAGCTGTATGGA +
Preference number: 4 (lower is better)
Translates to: KESDLHSEQPLGEWDPCNSLSHS*CLQLYG
Trigger: TCCATACAGCTGAAGACAGCATGAGTGGGAGAGACT...GTTGCAAGGATCCCACTCCCCCAGAGGCTGTTCAGAATGAAGATCTGACTCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000433678.5
ENST00000495571.5
CDS-3UTR GCA 90 bp CTGGATCTGGGCCAGCGTGCTGCAGGCTTCCTCCATCTCTTGCCAAACGAGAAATTAGATTGTATACTCTaGCATCTTCTGCTCTGTAGA +
Preference number: 4 (lower is better)
Translates to: LDLGQRAAGFLHLLPNEKLDCIL*HLLLCR
Trigger: TCTACAGAGCAGAAGATGGCAGAGTATACAATCTAA...TTTCTCGTTTGGCAAGAGATGGAGGAAGCCTGCAGCACGCTGGCCCAGATCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432242.5
CDS-3UTR GCA 90 bp AACTATACAGTAGGGGATGTTCAGTCTTGCAGATCTCAGACAAGTTACCGAGTCCCACCAGTGCTTGGGTaGGGCTCACACACTTCTTCA +
Preference number: 4 (lower is better)
Translates to: NYTVGDVQSCRSQTSYRVPPVLG*GSHTSS
Trigger: TGAAGAAGTGTGTGAGCCGCACCCAAGCACTGGTGG...GACTCGGTAACTTGTCTGAGATCTGCAAGACTGAACATCCCCTACTGTATAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR GCA 90 bp GTTTTTATTCTGGTTTCGGGCTCAATTAGAGTTACCTACAACAGACTCCGCGGACCACCAGTGCTTGGGTaGGGCTCACACACTTCTTCA +
Preference number: 4 (lower is better)
Translates to: VFILVSGSIRVTYNRLRGPPVLG*GSHTSS
Trigger: TGAAGAAGTGTGTGAGCCGCACCCAAGCACTGGTGG...TCCGCGGAGTCTGTTGTAGGTAACTCTAATTGAGCCCGAAACCAGAATAAAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000495571.5
ENST00000614454.1
CDS-3UTR GCA 90 bp TCAGTCTTGCAGATCTCAGACAAGTTACCGAGTCTGAATTTCAGTCCTAATATTAGTACAGGGCAGGGCTaGTCGAGGTGGAGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: SVLQISDKLPSLNFSPNISTGQG*SRWRCG
Trigger: GCCACACCTCCACCTCGAGCAGCCCTGCCCTGTACT...AATATTAGGACTGAAATTCAGACTCGGTAACTTGTCTGAGATCTGCAAGACTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR GCA 90 bp TTCATAGGATTGAATTGCCTGTTCCACTTTTCGCTTGTAGATATTGAGTTTGGCAGTACAGGGCAGGGCTaGTCGAGGTGGAGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: FIGLNCLFHFSLVDIEFGSTGQG*SRWRCG
Trigger: GCCACACCTCCACCTCGAGCAGCCCTGCCCTGTACT...GCCAAACTCAATATCTACAAGCGAAAAGTGGAACAGGCAATTCAATCCTATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR GCA 90 bp AGATTGCGGGCTTGGATCCTGACTATGCTGACTGCTAAACAATTTGAAAGTCCTGGGGAGAGGAGTCTTTaGTACAGACAGGGCAGGCAT +
Preference number: 4 (lower is better)
Translates to: RLRAWILTMLTAKQFESPGERSL*YRQGRH
Trigger: ATGCCTGCCCTGTCTGTAGCAAAGACTCCTCTCCCC...AGGACTTTCAAATTGTTTAGCAGTCAGCATAGTCAGGATCCAAGCCCGCAATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CCA 90 bp GAGAATGTAGATGCAATCATTATGCAATCTTCCAAAGAGGCTTTGACTCCCATCAGGCAATATGTCGGGTaGAAGACGTGGCGGCTCCCG +
Preference number: 4 (lower is better)
Translates to: ENVDAIIMQSSKEALTPIRQYVG*KTWRLP
Trigger: CGGGAGCCGCCACGTCTTCCACCCGACATATTGCCT...GATGGGAGTCAAAGCCTCTTTGGAAGATTGCATAATGATTGCATCTACATTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000422503.6
ENST00000432242.5
ENST00000448638.5
CDS-3UTR CCA 90 bp TTATATCCACAACCCCATCAGCGTGGCGGAAAGAGCAGTCGGCAAGCACATCATTGCTCTGTAGAGCTGTaGAAACAGACCATCAGCATA +
Preference number: 4 (lower is better)
Translates to: LYPQPHQRGGKSSRQAHHCSVEL*KQTISI
Trigger: TATGCTGATGGTCTGTTTCCACAGCTCTACAGAGCA...ATGATGTGCTTGCCGACTGCTCTTTCCGCCACGCTGATGGGGTTGTGGATATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000422503.6
ENST00000432242.5
ENST00000448638.5
CDS-3UTR CCA 90 bp CTGTGGGTCTTGGCACTCAGATCCTTTAGAAAAGCTATAGTGCCTTCTCCTCTGGGAGGAGAAGCTCCTTaGATTCTTCAGGAACATCCC +
Preference number: 4 (lower is better)
Translates to: LWVLALRSFRKAIVPSPLGGEAP*ILQEHP
Trigger: GGGATGTTCCTGAAGAATCCAAGGAGCTTCTCCTCC...CAGAGGAGAAGGCACTATAGCTTTTCTAAAGGATCTGAGTGCCAAGACCCACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422503.6
ENST00000432242.5
CDS-3UTR CCA 90 bp TCCTGGAGTTCCATGGCCTGCTGGATGTACATTTTCCCAGCTAGGATTTCACTTGGAGGAGAAGCTCCTTaGATTCTTCAGGAACATCCC +
Preference number: 4 (lower is better)
Translates to: SWSSMACWMYIFPARISLGGEAP*ILQEHP
Trigger: GGGATGTTCCTGAAGAATCCAAGGAGCTTCTCCTCC...AAGTGAAATCCTAGCTGGGAAAATGTACATCCAGCAGGCCATGGAACTCCAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432242.5
CDS-3UTR CCA 90 bp CTTTATGTCTCTAATCCAGGACTGAGCCTGTTCCAAATTATCTTCATTGACTTCACCAGCCTCTGGATCTaGGCCAGCGTGCTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: LYVSNPGLSLFQIIFIDFTSLWI*ASVLQA
Trigger: AGCCTGCAGCACGCTGGCCCAGATCCAGAGGCTGGT...GAAGTCAATGAAGATAATTTGGAACAGGCTCAGTCCTGGATTAGAGACATAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000422503.6
ENST00000432242.5
ENST00000448638.5
CDS-3UTR CCA 90 bp TTCATAGGATTGAATTGCCTGTTCCACTTTTCGCTTGTAGATATTGAGTTTGGCACCAGCCTCTGGATCTaGGCCAGCGTGCTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: FIGLNCLFHFSLVDIEFGTSLWI*ASVLQA
Trigger: AGCCTGCAGCACGCTGGCCCAGATCCAGAGGCTGGT...GCCAAACTCAATATCTACAAGCGAAAAGTGGAACAGGCAATTCAATCCTATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432242.5
CDS-3UTR CCA 90 bp AAAGAGTCAGATCTTCATTCTGAACAGCCTCTGGGGGAGTGGGATCCTTGCAACGTCCCAGGTGTCTTCTaGATTCGATGCAATCTCAAC +
Preference number: 4 (lower is better)
Translates to: KESDLHSEQPLGEWDPCNVPGVF*IRCNLN
Trigger: GTTGAGATTGCATCGAATCCAGAAGACACCTGGGAC...GTTGCAAGGATCCCACTCCCCCAGAGGCTGTTCAGAATGAAGATCTGACTCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000433678.5
ENST00000448638.5
CDS-3UTR CCA 90 bp TTTGACCTGGTCTATAACTGTTTCAGGTGGCTGATCAGGTCTCCCATCGGTCAGGTCCCAGGTGTCTTCTaGATTCGATGCAATCTCAAC +
Preference number: 4 (lower is better)
Translates to: FDLVYNCFRWLIRSPIGQVPGVF*IRCNLN
Trigger: GTTGAGATTGCATCGAATCCAGAAGACACCTGGGAC...CTGACCGATGGGAGACCTGATCAGCCACCTGAAACAGTTATAGACCAGGTCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416277.5
ENST00000448638.5
CDS-3UTR CCA 90 bp ATTTTCCCAGCTAGGATTTCACTTTCCAGCATCGACAGCTCTTTCAGTGAAATGACAACCCCATCAGCGTaGCGGAAAGAGCAGTCGGCA +
Preference number: 4 (lower is better)
Translates to: IFPARISLSSIDSSFSEMTTPSA*RKEQSA
Trigger: TGCCGACTGCTCTTTCCGCCACGCTGATGGGGTTGT...CATTTCACTGAAAGAGCTGTCGATGCTGGAAAGTGAAATCCTAGCTGGGAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432242.5
CDS-3UTR CCA 90 bp AGTCAGAAAAAGCCAGAACCAAGTCGTCAAACGGGTAGGGGAGGCAGCAGGGATACTCATTCTCCGGTTTaGCTTTTATATCCACAACCC +
Preference number: 4 (lower is better)
Translates to: SQKKPEPSRQTGRGGSRDTHSPV*LLYPQP
Trigger: GGGTTGTGGATATAAAAGCCAAACCGGAGAATGAGT...ATCCCTGCTGCCTCCCCTACCCGTTTGACGACTTGGTTCTGGCTTTTTCTGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000477737.6
CDS-3UTR CCA 90 bp AGTCAGAAAAAGCCAGAACCAAGTCGTCAAACGGGTAGGGGAGGCAGCAGGGATCACTCAGGGTGTTTGTaGAGCTTCCAATCTTTATGT +
Preference number: 4 (lower is better)
Translates to: SQKKPEPSRQTGRGGSRDHSGCL*SFQSLC
Trigger: ACATAAAGATTGGAAGCTCCACAAACACCCTGAGTG...ATCCCTGCTGCCTCCCCTACCCGTTTGACGACTTGGTTCTGGCTTTTTCTGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000477737.6
CDS-3UTR CCA 90 bp CTTTATCAGCAAAAGCAGTTTTCAGGGCACTCAGGGTGTTTGTGGAGCTTCCAACAGCCTCTGGGGGAGTaGGATCCTTGCAACCAAAAT +
Preference number: 4 (lower is better)
Translates to: LYQQKQFSGHSGCLWSFQQPLGE*DPCNQN
Trigger: ATTTTGGTTGCAAGGATCCCACTCCCCCAGAGGCTG...TTGGAAGCTCCACAAACACCCTGAGTGCCCTGAAAACTGCTTTTGCTGATAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
CDS-3UTR CCA 90 bp ACACATCTGAAGAATCGTGGTCATAAACCTGGCTTCCTTCTCGCGTCACCTTTTATTCTGAACAGCCTCTaGGGGAGTGGGATCCTTGCA +
Preference number: 4 (lower is better)
Translates to: THLKNRGHKPGFLLASPFILNSL*GSGILA
Trigger: TGCAAGGATCCCACTCCCCCAGAGGCTGTTCAGAAT...AAAAGGTGACGCGAGAAGGAAGCCAGGTTTATGACCACGATTCTTCAGATGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
ENST00000495571.5
CDS-3UTR CCA 90 bp AAAACAAGATTGCGGGCTTGGATCCTGACTATGCTGACTGCTAAACAATTTGAACAGTCCTCCGGCTGCTaGCATTGGAGAGGCCATCCT +
Preference number: 4 (lower is better)
Translates to: KTRLRAWILTMLTAKQFEQSSGC*HWRGHP
Trigger: AGGATGGCCTCTCCAATGCCAGCAGCCGGAGGACTG...TTCAAATTGTTTAGCAGTCAGCATAGTCAGGATCCAAGCCCGCAATCTTGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CCA 90 bp ACAGTCAGAAAAAGCCAGAACCAAGTCGTCAAACGGGTAGGGGAGGCAGCAGGGTTGAGTTTGGCTCCTTaGGGGTTAATTAATGTCATC +
Preference number: 4 (lower is better)
Translates to: TVRKSQNQVVKRVGEAAGLSLAP*GLINVI
Trigger: GATGACATTAATTAACCCCCAAGGAGCCAAACTCAA...CCCTGCTGCCTCCCCTACCCGTTTGACGACTTGGTTCTGGCTTTTTCTGACTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CCA 90 bp CTTCTCTCGTCTTGGCTCTCTGGAATCCTGCGTGTCCGCTTCTTTCAGTGGCCATTGAGTTTGGCTCCTTaGGGGTTAATTAATGTCATC +
Preference number: 4 (lower is better)
Translates to: LLSSWLSGILRVRFFQWPLSLAP*GLINVI
Trigger: GATGACATTAATTAACCCCCAAGGAGCCAAACTCAA...TGGCCACTGAAAGAAGCGGACACGCAGGATTCCAGAGAGCCAAGACGAGAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR CCA 90 bp GCTGTATGGAATGAAGGAAACAGCTCCAGAGCGAGAGACTTGGGCTTGAAGCTCTTGCATAATTCTTCTTaGCAGCCTCCTGGAGTTCCA +
Preference number: 4 (lower is better)
Translates to: AVWNEGNSSRARDLGLKLLHNSS*QPPGVP
Trigger: TGGAACTCCAGGAGGCTGCCAAGAAGAATTATGCAA...GAGCTTCAAGCCCAAGTCTCTCGCTCTGGAGCTGTTTCCTTCATTCCATACAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000495571.5
CDS-3UTR CCA 90 bp GTGAGACGTGTCAATGAGAATGTAGATGCAATCATTATGCAATCTTCCAAAGAGTGTGACCCGCGCCTCTaGTTCCGAGCGCGGTCTGTT +
Preference number: 4 (lower is better)
Translates to: VRRVNENVDAIIMQSSKECDPRL*FRARSV
Trigger: AACAGACCGCGCTCGGAACCAGAGGCGCGGGTCACA...CTCTTTGGAAGATTGCATAATGATTGCATCTACATTCTCATTGACACGTCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432242.5
CDS-3UTR CCA 90 bp AGAGTTTTTATTCTGGTTTCGGGCTCAATTAGAGTTACCTACAACAGACTCCGCAAGCCCACCAGTGCTTaGGTGCGGCTCACACACTTC +
Preference number: 4 (lower is better)
Translates to: RVFILVSGSIRVTYNRLRKPTSA*VRLTHF
Trigger: GAAGTGTGTGAGCCGCACCCAAGCACTGGTGGGCTT...GCGGAGTCTGTTGTAGGTAACTCTAATTGAGCCCGAAACCAGAATAAAAACTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000495571.5
ENST00000614454.1
CDS-3UTR CCA 90 bp TCAAGGACTCAGAATAAAGGTCTTGCATCTTCTCCAGATCACTGTGACCCTGTTGGGCTTCTCTCGTCTTaGCTCTCTGGAATCCTGCGT +
Preference number: 4 (lower is better)
Translates to: SRTQNKGLASSPDHCDPVGLLSS*LSGILR
Trigger: ACGCAGGATTCCAGAGAGCCAAGACGAGAGAAGCCC...AACAGGGTCACAGTGATCTGGAGAAGATGCAAGACCTTTATTCTGAGTCCTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000495571.5
CDS-3UTR CCA 90 bp AAAACAAGATTGCGGGCTTGGATCCTGACTATGCTGACTGCTAAACAATTTGAAGCTGGAGTGGCTGCTTaGCGGGCCTCTTTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: KTRLRAWILTMLTAKQFEAGVAA*RASFSS
Trigger: GGAGGAAAAAGAGGCCCGCCAAGCAGCCACTCCAGC...TTCAAATTGTTTAGCAGTCAGCATAGTCAGGATCCAAGCCCGCAATCTTGTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CCA 90 bp ATGAAAATGTCAGGAAACTATACAGTAGGGGATGTTCAGTCTTGCAGATCTCAGCTGCTGTGGGTGGCTTaGAGAGTACAGGGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: MKMSGNYTVGDVQSCRSQLLWVA*RVQGRA
Trigger: AGCCCTGCCCTGTACTCTCCAAGCCACCCACAGCAG...CTGAGATCTGCAAGACTGAACATCCCCTACTGTATAGTTTCCTGACATTTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CCA 90 bp AACTATACAGTAGGGGATGTTCAGTCTTGCAGATCTCAGACAAGTTACCGAGTCAGCCCTTTGCTGCTGTaGGTGGCTTGGAGAGTACAG +
Preference number: 4 (lower is better)
Translates to: NYTVGDVQSCRSQTSYRVSPLLL*VAWRVQ
Trigger: CTGTACTCTCCAAGCCACCCACAGCAGCAAAGGGCT...GACTCGGTAACTTGTCTGAGATCTGCAAGACTGAACATCCCCTACTGTATAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CCA 90 bp GGATGTACATTTTCCCAGCTAGGATTTCACTTTCCAGCATCGACAGCTCTTTCAAGCCCTTTGCTGCTGTaGGTGGCTTGGAGAGTACAG +
Preference number: 4 (lower is better)
Translates to: GCTFSQLGFHFPASTALSSPLLL*VAWRVQ
Trigger: CTGTACTCTCCAAGCCACCCACAGCAGCAAAGGGCT...TGAAAGAGCTGTCGATGCTGGAAAGTGAAATCCTAGCTGGGAAAATGTACATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR TCA 90 bp GCTGTATGGAATGAAGGAAACAGCTCCAGAGCGAGAGACTTGGGCTTGAAGCTCTTAAGCCCATGCAGTTaGAGCCATTTCTCAGATGAA +
Preference number: 4 (lower is better)
Translates to: AVWNEGNSSRARDLGLKLLSPCS*SHFSDE
Trigger: TTCATCTGAGAAATGGCTTCAACTGCATGGGCTTAA...GAGCTTCAAGCCCAAGTCTCTCGCTCTGGAGCTGTTTCCTTCATTCCATACAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422503.6
ENST00000432242.5
ENST00000433678.5
CDS-3UTR TCA 90 bp CTCATGCTGTCTTCAGCTGTATGGAATGAAGGAAACAGCTCCAGAGCGAGAGACCACTTCACAGGCTCTTaGGAAACCCGTATGATATTG +
Preference number: 4 (lower is better)
Translates to: LMLSSAVWNEGNSSRARDHFTGS*ETRMIL
Trigger: CAATATCATACGGGTTTCTCAAGAGCCTGTGAAGTG...GTCTCTCGCTCTGGAGCTGTTTCCTTCATTCCATACAGCTGAAGACAGCATGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000433678.5
CDS-3UTR TCA 90 bp AGATGCAATCATTATGCAATCTTCCAAAGAGGCTTTGACTCCCATCCTGTAGCCCTTCTCCTCTGGCGTTaGAGGACACTGTGTAGACTG +
Preference number: 4 (lower is better)
Translates to: RCNHYAIFQRGFDSHPVALLLWR*RTLCRL
Trigger: CAGTCTACACAGTGTCCTTCAACGCCAGAGGAGAAG...GGCTACAGGATGGGAGTCAAAGCCTCTTTGGAAGATTGCATAATGATTGCATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000422503.6
ENST00000432242.5
CDS-3UTR TCA 90 bp ACACATCTGAAGAATCGTGGTCATAAACCTGGCTTCCTTCTCGCGTCACCTTTTCTTCCAAAGAGGCTTTaGCTCCCATCCTGTAGCCAT +
Preference number: 4 (lower is better)
Translates to: THLKNRGHKPGFLLASPFLPKRL*LPSCSH
Trigger: ATGGCTACAGGATGGGAGTCAAAGCCTCTTTGGAAG...AAAAGGTGACGCGAGAAGGAAGCCAGGTTTATGACCACGATTCTTCAGATGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
CDS-3UTR TCA 90 bp GGCCTTGTTTGCATAATTCTTCTTGGCAGCCTCCTGGAGTTCCATGGCCTGCTGAGTGAGACGTGTCAATaGGAATGTAGATGCAATCAT +
Preference number: 4 (lower is better)
Translates to: GLVCIILLGSLLEFHGLLSETCQ*ECRCNH
Trigger: ATGATTGCATCTACATTCTCATTGACACGTCTCACT...CAGCAGGCCATGGAACTCCAGGAGGCTGCCAAGAAGAATTATGCAAACAAGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432242.5
CDS-3UTR TCA 90 bp CTTTGGGTATCACAATTTTGGCAAACACATAATCTCCAACCTGGAGCAGCGGGCCGCCAAGCAACTGCTTaGCCATCAAACTTCACAAAG +
Preference number: 4 (lower is better)
Translates to: LWVSQFWQTHNLQPGAAGRQATA*PSNFTK
Trigger: CTTTGTGAAGTTTGATGGTCAAGCAGTTGCTTGGCG...GCCCGCTGCTCCAGGTTGGAGATTATGTGTTTGCCAAAATTGTGATACCCAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000495571.5
CDS-3UTR TCA 90 bp TTGGCTTTTATATCCACAACCCCATCAGCGTGGCGGAAAGAGCAGTCGGCAAGCCCAAATTATCTTCATTaGCTTCAGCAAGTTGTTCCC +
Preference number: 4 (lower is better)
Translates to: LAFISTTPSAWRKEQSASPNYLH*LQQVVP
Trigger: GGGAACAACTTGCTGAAGTCAATGAAGATAATTTGG...GCTTGCCGACTGCTCTTTCCGCCACGCTGATGGGGTTGTGGATATAAAAGCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000422503.6
ENST00000432242.5
ENST00000448638.5
CDS-3UTR TCA 90 bp AAAGAGTCAGATCTTCATTCTGAACAGCCTCTGGGGGAGTGGGATCCTTGCAACTTCTCCAGATCACTGTaGCCCTGTTCCATTTCCTTA +
Preference number: 4 (lower is better)
Translates to: KESDLHSEQPLGEWDPCNFSRSL*PCSISL
Trigger: TAAGGAAATGGAACAGGGTCACAGTGATCTGGAGAA...GTTGCAAGGATCCCACTCCCCCAGAGGCTGTTCAGAATGAAGATCTGACTCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000433678.5
ENST00000448638.5
ENST00000495571.5
CDS-3UTR TCA 90 bp GTGAGACGTGTCAATGAGAATGTAGATGCAATCATTATGCAATCTTCCAAAGAGCGGGACTGCTGCCACTaGCAAGGCATCCATGAGGGT +
Preference number: 4 (lower is better)
Translates to: VRRVNENVDAIIMQSSKERDCCH*QGIHEG
Trigger: ACCCTCATGGATGCCTTGTCAGTGGCAGCAGTCCCG...CTCTTTGGAAGATTGCATAATGATTGCATCTACATTCTCATTGACACGTCTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
CDS-3UTR TCA 90 bp AAAGAGCAGTCGGCAAGCACATCATACAAGGATAGCTTCTGGGCCTTCAAGCCAATGTCCTGTCTAATGTaGGTTTCCTCATCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: KEQSASTSYKDSFWAFKPMSCLM*VSSSVA
Trigger: AGCCACAGATGAGGAAACTCACATTAGACAGGACAT...TGGCTTGAAGGCCCAGAAGCTATCCTTGTATGATGTGCTTGCCGACTGCTCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422503.6
ENST00000432242.5
CDS-3UTR TCA 90 bp CTTTGTTGGATTTCCTTGCAATTTCTGTTGCTCTCCCGGGGCCTTGTTTGCATAGGGGGTGACTTTATATaGGAGCAAGAGAGCGCATAC +
Preference number: 4 (lower is better)
Translates to: LCWISLQFLLLSRGLVCIGGDFI*EQESAY
Trigger: GTATGCGCTCTCTTGCTCTCATATAAAGTCACCCCC...TATGCAAACAAGGCCCCGGGAGAGCAACAGAAATTGCAAGGAAATCCAACAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR TCA 90 bp GATCAGGTCTCCCATCGGTCAGAAGGTAGATTGCCTGTGTTTCTTTATCAGCAATTTCAGTGTCAACGCTaGGGTCTGAACAGCCTGGAA +
Preference number: 4 (lower is better)
Translates to: DQVSHRSEGRLPVFLYQQFQCQR*GLNSLE
Trigger: TTCCAGGCTGTTCAGACCTCAGCGTTGACACTGAAA...TTGCTGATAAAGAAACACAGGCAATCTACCTTCTGACCGATGGGAGACCTGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432242.5
CDS-3UTR GCA 90 bp CAAGGACTCAGAATAAAGGTCTTGCATCTTCTCCAGATCACTGTGACCCTGTTCTGCCTCTGCAGCTGCTaGTCAGAGATGGTAGAAGAT +
Preference number: 4 (lower is better)
Translates to: QGLRIKVLHLLQITVTLFCLCSC*SEMVED
Trigger: ATCTTCTACCATCTCTGAGCAGCAGCTGCAGAGGCA...GAACAGGGTCACAGTGATCTGGAGAAGATGCAAGACCTTTATTCTGAGTCCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000433678.5
ENST00000448638.5
CDS-3UTR GCA 90 bp ACACATCTGAAGAATCGTGGTCATAAACCTGGCTTCCTTCTCGCGTCACCTTTTTGCCTCTGCAGCTGCTaGTCAGAGATGGTAGAAGAT +
Preference number: 4 (lower is better)
Translates to: THLKNRGHKPGFLLASPFCLCSC*SEMVED
Trigger: ATCTTCTACCATCTCTGAGCAGCAGCTGCAGAGGCA...AAAAGGTGACGCGAGAAGGAAGCCAGGTTTATGACCACGATTCTTCAGATGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
CDS-3UTR GCA 90 bp TTTGATCTGAAAGGCCCCATGGTCCCTTCAACATATTCAGAGATGAAGTTTGTGCATCCCTCTTGCCTCTaGAGCTGCTGCTCAGAGATG +
Preference number: 4 (lower is better)
Translates to: FDLKGPMVPSTYSEMKFVHPSCL*SCCSEM
Trigger: CATCTCTGAGCAGCAGCTGCAGAGGCAAGAGGGATG...CACAAACTTCATCTCTGAATATGTTGAAGGGACCATGGGGCCTTTCAGATCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
CDS-3UTR GCA 90 bp TATTTCTGCAGCCATGTCTTAGAGTCCCAGGTGTCTTCTGGATTCGATGCAATCTTAATCCATCCCTCTTaGCTCTGCAGCTGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: YFCSHVLESQVSSGFDAILIHPS*LCSCCS
Trigger: TGAGCAGCAGCTGCAGAGGCAAGAGGGATGGATTAA...GATTGCATCGAATCCAGAAGACACCTGGGACTCTAAGACATGGCTGCAGAAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422503.6
ENST00000432242.5
CDS-3UTR GCA 90 bp GATCAAGGACTCAGAATAAAGGTCTTGCATCTTCTCCAGATCACTGTGACCCTGATGACACCAAAAATCTaGCGGCTCTTGCTGGTGAGC +
Preference number: 4 (lower is better)
Translates to: DQGLRIKVLHLLQITVTLMTPKI*RLLLVS
Trigger: GCTCACCAGCAAGAGCCGGCAGATTTTTGGTGTCAT...CAGGGTCACAGTGATCTGGAGAAGATGCAAGACCTTTATTCTGAGTCCTTGATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000433678.5
ENST00000448638.5
CDS-3UTR GCA 90 bp CTTTATCAGCAAAAGCAGTTTTCAGGGCACTCAGGGTGTTTGTGGAGCTTCCAATGTTCTCTCGGCAAATaGGTGGAATCTGCTGTGGGT +
Preference number: 4 (lower is better)
Translates to: LYQQKQFSGHSGCLWSFQCSLGK*VESAVG
Trigger: ACCCACAGCAGATTCCACGCATTTGCCGAGAGAACA...TTGGAAGCTCCACAAACACCCTGAGTGCCCTGAAAACTGCTTTTGCTGATAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000422503.6
ENST00000432242.5
CDS-3UTR GCA 90 bp GATCAAGGACTCAGAATAAAGGTCTTGCATCTTCTCCAGATCACTGTGACCCTGGCTTCCTCCATCTCTTaGCAAACGAGAAACACGTCC +
Preference number: 4 (lower is better)
Translates to: DQGLRIKVLHLLQITVTLASSIS*QTRNTS
Trigger: GGACGTGTTTCTCGTTTGGCAAGAGATGGAGGAAGC...CAGGGTCACAGTGATCTGGAGAAGATGCAAGACCTTTATTCTGAGTCCTTGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000433678.5
ENST00000448638.5
CDS-3UTR GCA 90 bp GTTTGCATAATTCTTCTTGGCAGCCTCCTGGAGTTCCATGGCCTGCTGGATGTAGTCTCCATCCTTTTCTaGATTGTACCACCAGTCCAT +
Preference number: 4 (lower is better)
Translates to: VCIILLGSLLEFHGLLDVVSILF*IVPPVH
Trigger: ATGGACTGGTGGTACAATGCAGAAAAGGATGGAGAC...TACATCCAGCAGGCCATGGAACTCCAGGAGGCTGCCAAGAAGAATTATGCAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000495571.5
CDS-3UTR GCA 90 bp TTATATCCACAACCCCATCAGCGTGGCGGAAAGAGCAGTCGGCAAGCACATCATCCTCAGCCAGCAAGATaGTCATTTCTTTGTCACTTA +
Preference number: 4 (lower is better)
Translates to: LYPQPHQRGGKSSRQAHHPQPAR*SFLCHL
Trigger: TAAGTGACAAAGAAATGAGCATCTTGCTGGCTGAGG...ATGATGTGCTTGCCGACTGCTCTTTCCGCCACGCTGATGGGGTTGTGGATATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
CDS-3UTR GCA 90 bp TCCCGGGGCCTTGTTTGCATAATTCTTCTTGGCAGCCTCCTGGAGTTCCATGGCTTCATAGGATTGAATTaGCTGTTCCACTTTTCGCTT +
Preference number: 4 (lower is better)
Translates to: SRGLVCIILLGSLLEFHGFIGLN*LFHFSL
Trigger: AAGCGAAAAGTGGAACAGGCAATTCAATCCTATGAA...GCCATGGAACTCCAGGAGGCTGCCAAGAAGAATTATGCAAACAAGGCCCCGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR GCA 90 bp CTGGTTTCGGGCTCAATTAGAGTTACCTACAACAGACTCCGCGGAGGGGCCAGTTTCATAGGATTGAATTaGCTGTTCCACTTTTCGCTT +
Preference number: 4 (lower is better)
Translates to: LVSGSIRVTYNRLRGGASFIGLN*LFHFSL
Trigger: AAGCGAAAAGTGGAACAGGCAATTCAATCCTATGAA...ACTGGCCCCTCCGCGGAGTCTGTTGTAGGTAACTCTAATTGAGCCCGAAACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495571.5
ENST00000614454.1
CDS-3UTR GCA 90 bp CTTTCAGTGGCCAGAAGAGGAAAGCAGAGTTCCTCGCCTCCACATCCTCTACTTTTTTCTGTGGCCACATaGTTATTGGGAAGTGCTATG +
Preference number: 4 (lower is better)
Translates to: LSVARRGKQSSSPPHPLLFSVAT*LLGSAM
Trigger: CATAGCACTTCCCAATAAGCATGTGGCCACAGAAAA...AAGTAGAGGATGTGGAGGCGAGGAACTCTGCTTTCCTCTTCTGGCCACTGAAAG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR GCA 90 bp ATTAGAGTTACCTACAACAGACTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGCTGATCTTAATAAGTaGACTCCGAGGGCAAAATTC +
Preference number: 4 (lower is better)
Translates to: IRVTYNRLRGGASFSVNAADLNK*TPRAKF
Trigger: GAATTTTGCCCTCGGAGTGCACTTATTAAGATCAGC...AGCGTTGACACTGAAACTGGCCCCTCCGCGGAGTCTGTTGTAGGTAACTCTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495571.5
ENST00000614454.1
CDS-3UTR GCA 90 bp AGATTGCGGGCTTGGATCCTGACTATGCTGACTGCTAAACAATTTGAAAGTCCTGGCTCTCTGGAATCCTaGGTGTCCGCTTCTTTCAGT +
Preference number: 4 (lower is better)
Translates to: RLRAWILTMLTAKQFESPGSLES*VSASFS
Trigger: ACTGAAAGAAGCGGACACGCAGGATTCCAGAGAGCC...AGGACTTTCAAATTGTTTAGCAGTCAGCATAGTCAGGATCCAAGCCCGCAATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR GCA 90 bp GTAAGAGTTTTTATTCTGGTTTCGGGCTCAATTAGAGTTACCTACAACAGACTCCGCTCCTCAGCCCTTTaGTGCTGTGGGTGGCTTGGA +
Preference number: 4 (lower is better)
Translates to: VRVFILVSGSIRVTYNRLRSSAL*CCGWLG
Trigger: TCCAAGCCACCCACAGCAGCAAAGGGCTGAGGAGCG...GAGTCTGTTGTAGGTAACTCTAATTGAGCCCGAAACCAGAATAAAAACTCTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000495571.5
ENST00000614454.1
CDS-3UTR CCA 90 bp TTTGATCTGAAAGGCCCCATGGTCCCTTCAACATATTCAGAGATGAAGTTTGTGGCGTGGAATCTGCTGTaGGTCTTGGCACTCAGATCC +
Preference number: 4 (lower is better)
Translates to: FDLKGPMVPSTYSEMKFVAWNLL*VLALRS
Trigger: GGATCTGAGTGCCAAGACCCACAGCAGATTCCACGC...CACAAACTTCATCTCTGAATATGTTGAAGGGACCATGGGGCCTTTCAGATCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416277.5
ENST00000432242.5
CDS-3UTR CCA 90 bp CTTTTCTGCATTGTACCACCAGTCCATGATCAAGGACTCAGAATAAAGGTCTTGGCGTGGAATCTGCTGTaGGTCTTGGCACTCAGATCC +
Preference number: 4 (lower is better)
Translates to: LFCIVPPVHDQGLRIKVLAWNLL*VLALRS
Trigger: GGATCTGAGTGCCAAGACCCACAGCAGATTCCACGC...CAAGACCTTTATTCTGAGTCCTTGATCATGGACTGGTGGTACAATGCAGAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000433678.5
CDS-3UTR CCA 90 bp AGGCCCCATGGTCCCTTCAACATATTCAGAGATGAAGTTTGTGTTGAATCGACACTCTCGGCAAATGCGTaGAATCTGCTGTGGGTCTTG +
Preference number: 4 (lower is better)
Translates to: RPHGPFNIFRDEVCVESTLSANA*NLLWVL
Trigger: CAAGACCCACAGCAGATTCCACGCATTTGCCGAGAG...TGTCGATTCAACACAAACTTCATCTCTGAATATGTTGAAGGGACCATGGGGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416277.5
ENST00000432242.5
CDS-3UTR CCA 90 bp AGATTGCGGGCTTGGATCCTGACTATGCTGACTGCTAAACAATTTGAAAGTCCTCTCTCGGCAAATGCGTaGAATCTGCTGTGGGTCTTG +
Preference number: 4 (lower is better)
Translates to: RLRAWILTMLTAKQFESPLSANA*NLLWVL
Trigger: CAAGACCCACAGCAGATTCCACGCATTTGCCGAGAG...AGGACTTTCAAATTGTTTAGCAGTCAGCATAGTCAGGATCCAAGCCCGCAATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000477737.6
CDS-3UTR CCA 90 bp TCAAGGACTCAGAATAAAGGTCTTGCATCTTCTCCAGATCACTGTGACCCTGTTCTCTCGGCAAATGCGTaGAATCTGCTGTGGGTCTTG +
Preference number: 4 (lower is better)
Translates to: SRTQNKGLASSPDHCDPVLSANA*NLLWVL
Trigger: CAAGACCCACAGCAGATTCCACGCATTTGCCGAGAG...AACAGGGTCACAGTGATCTGGAGAAGATGCAAGACCTTTATTCTGAGTCCTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000433678.5
CDS-3UTR CCA 90 bp AACTATACAGTAGGGGATGTTCAGTCTTGCAGATCTCAGACAAGTTACCGAGTCCTCTCGGCAAATGCGTaGAATCTGCTGTGGGTCTTG +
Preference number: 4 (lower is better)
Translates to: NYTVGDVQSCRSQTSYRVLSANA*NLLWVL
Trigger: CAAGACCCACAGCAGATTCCACGCATTTGCCGAGAG...GACTCGGTAACTTGTCTGAGATCTGCAAGACTGAACATCCCCTACTGTATAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000477737.6
CDS-3UTR CCA 90 bp TCTTTGGTAATGTTGACGTGGACCAAGCTCCCATCCTTCCAGGGAGCATGGACATACAAGGATAGCTTCTaGGCCTTCAAGCCATATTTC +
Preference number: 4 (lower is better)
Translates to: SLVMLTWTKLPSFQGAWTYKDSF*AFKPYF
Trigger: GAAATATGGCTTGAAGGCCCAGAAGCTATCCTTGTA...TGTCCATGCTCCCTGGAAGGATGGGAGCTTGGTCCACGTCAACATTACCAAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422503.6
CDS-3UTR CCA 90 bp TATATCCACAACCCCATCAGCGTGGCGGAAAGAGCAGTCGGCAAGCACATCATACACTCAGGGTGTTTGTaGAGCTTCCAATCTTTATGT +
Preference number: 4 (lower is better)
Translates to: YIHNPISVAERAVGKHIIHSGCL*SFQSLC
Trigger: ACATAAAGATTGGAAGCTCCACAAACACCCTGAGTG...TATGATGTGCTTGCCGACTGCTCTTTCCGCCACGCTGATGGGGTTGTGGATATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000422503.6
ENST00000432242.5
ENST00000448638.5
CDS-3UTR CCA 90 bp AACTATACAGTAGGGGATGTTCAGTCTTGCAGATCTCAGACAAGTTACCGAGTCCAGCCTCTGGGGGAGTaGGATCCTTGCAACCAAAAT +
Preference number: 4 (lower is better)
Translates to: NYTVGDVQSCRSQTSYRVQPLGE*DPCNQN
Trigger: ATTTTGGTTGCAAGGATCCCACTCCCCCAGAGGCTG...GACTCGGTAACTTGTCTGAGATCTGCAAGACTGAACATCCCCTACTGTATAGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CCA 90 bp GTGAGACGTGTCAATGAGAATGTAGATGCAATCATTATGCAATCTTCCAAAGAGCAGTCCTCCGGCTGCTaGCATTGGAGAGGCCATCCT +
Preference number: 4 (lower is better)
Translates to: VRRVNENVDAIIMQSSKEQSSGC*HWRGHP
Trigger: AGGATGGCCTCTCCAATGCCAGCAGCCGGAGGACTG...CTCTTTGGAAGATTGCATAATGATTGCATCTACATTCTCATTGACACGTCTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
CDS-3UTR CCA 90 bp TCAGTCTTGCAGATCTCAGACAAGTTACCGAGTCTGAATTTCAGTCCTAATATTGCTGGAGTGGCTGCTTaGCGGGCCTCTTTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: SVLQISDKLPSLNFSPNIAGVAA*RASFSS
Trigger: GGAGGAAAAAGAGGCCCGCCAAGCAGCCACTCCAGC...AATATTAGGACTGAAATTCAGACTCGGTAACTTGTCTGAGATCTGCAAGACTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CCA 90 bp GTAAGAGTTTTTATTCTGGTTTCGGGCTCAATTAGAGTTACCTACAACAGACTCGCTGGAGTGGCTGCTTaGCGGGCCTCTTTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: VRVFILVSGSIRVTYNRLAGVAA*RASFSS
Trigger: GGAGGAAAAAGAGGCCCGCCAAGCAGCCACTCCAGC...GAGTCTGTTGTAGGTAACTCTAATTGAGCCCGAAACCAGAATAAAAACTCTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000495571.5
ENST00000614454.1
CDS-3UTR TCA 90 bp AAAGAGTCAGATCTTCATTCTGAACAGCCTCTGGGGGAGTGGGATCCTTGCAACATTTCTCAGATGAAATaGGACTCTGCTCAGCCAAGT +
Preference number: 4 (lower is better)
Translates to: KESDLHSEQPLGEWDPCNISQMK*DSAQPS
Trigger: ACTTGGCTGAGCAGAGTCTCATTTCATCTGAGAAAT...GTTGCAAGGATCCCACTCCCCCAGAGGCTGTTCAGAATGAAGATCTGACTCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000433678.5
ENST00000448638.5
CDS-3UTR TCA 90 bp TGGAGTTCCATGGCCTGCTGGATGTACATTTTCCCAGCTAGGATTTCACTTTCCCACTTCACAGGCTCTTaGGAAACCCGTATGATATTG +
Preference number: 4 (lower is better)
Translates to: WSSMACWMYIFPARISLSHFTGS*ETRMIL
Trigger: CAATATCATACGGGTTTCTCAAGAGCCTGTGAAGTG...GGAAAGTGAAATCCTAGCTGGGAAAATGTACATCCAGCAGGCCATGGAACTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432242.5
CDS-3UTR TCA 90 bp GGATGTTCAGTCTTGCAGATCTCAGACAAGTTACCGAGTCTGAATTTCAGTCCTCTTCCAAAGAGGCTTTaGCTCCCATCCTGTAGCCAT +
Preference number: 4 (lower is better)
Translates to: GCSVLQISDKLPSLNFSPLPKRL*LPSCSH
Trigger: ATGGCTACAGGATGGGAGTCAAAGCCTCTTTGGAAG...AGGACTGAAATTCAGACTCGGTAACTTGTCTGAGATCTGCAAGACTGAACATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000477737.6
CDS-3UTR TCA 90 bp CTCATGCTGTCTTCAGCTGTATGGAATGAAGGAAACAGCTCCAGAGCGAGAGACTTGCTCTTCATTGAGTaGGACGTGTCAATGAGAATG +
Preference number: 4 (lower is better)
Translates to: LMLSSAVWNEGNSSRARDLLFIE*DVSMRM
Trigger: CATTCTCATTGACACGTCTCACTCAATGAAGAGCAA...GTCTCTCGCTCTGGAGCTGTTTCCTTCATTCCATACAGCTGAAGACAGCATGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422503.6
ENST00000432242.5
ENST00000433678.5
CDS-3UTR TCA 90 bp CCACTCATGCTGTCTTCAGCTGTATGGAATGAAGGAAACAGCTCCAGAGCGAGATTGCTCTTCATTGAGTaGGACGTGTCAATGAGAATG +
Preference number: 4 (lower is better)
Translates to: PLMLSSAVWNEGNSSRARLLFIE*DVSMRM
Trigger: CATTCTCATTGACACGTCTCACTCAATGAAGAGCAA...TCTCGCTCTGGAGCTGTTTCCTTCATTCCATACAGCTGAAGACAGCATGAGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422503.6
ENST00000432242.5
ENST00000433678.5
CDS-3UTR TCA 90 bp CTGAAGACACATCTGAAGAATCGTGGTCATAAACCTGGCTTCCTTCTCGCGTCACAGTTTGCTCTTCATTaGGTGAGACGTGTCAATGAG +
Preference number: 4 (lower is better)
Translates to: LKTHLKNRGHKPGFLLASQFALH*VRRVNE
Trigger: CTCATTGACACGTCTCACTCAATGAAGAGCAAACTG...TGACGCGAGAAGGAAGCCAGGTTTATGACCACGATTCTTCAGATGTGTCTTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
CDS-3UTR TCA 90 bp AAAGAGTCAGATCTTCATTCTGAACAGCCTCTGGGGGAGTGGGATCCTTGCAACTGTTCCTGTATGAACTaGATGATCTTGTCCTTCACC +
Preference number: 4 (lower is better)
Translates to: KESDLHSEQPLGEWDPCNCSCMN*MILSFT
Trigger: GGTGAAGGACAAGATCATTCAGTTCATACAGGAACA...GTTGCAAGGATCCCACTCCCCCAGAGGCTGTTCAGAATGAAGATCTGACTCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000433678.5
ENST00000448638.5
ENST00000495571.5
CDS-3UTR TCA 90 bp GGATTGAATTGCCTGTTCCACTTTTCGCTTGTAGATATTGAGTTTGGCTCCTTGGTCAGATCTTCATTCTaGACAGCCTCTGGGGGAGTG +
Preference number: 4 (lower is better)
Translates to: GLNCLFHFSLVDIEFGSLVRSSF*TASGGV
Trigger: CACTCCCCCAGAGGCTGTTCAGAATGAAGATCTGAC...CAAGGAGCCAAACTCAATATCTACAAGCGAAAAGTGGAACAGGCAATTCAATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000495571.5
CDS-3UTR TCA 90 bp CCACTCATGCTGTCTTCAGCTGTATGGAATGAAGGAAACAGCTCCAGAGCGAGAGAATCGACATCAGATTaGGGCTTTGCACACTTTTCT +
Preference number: 4 (lower is better)
Translates to: PLMLSSAVWNEGNSSRARESTSD*GFAHFS
Trigger: AGAAAAGTGTGCAAAGCCTCAATCTGATGTCGATTC...TCTCGCTCTGGAGCTGTTTCCTTCATTCCATACAGCTGAAGACAGCATGAGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000495571.5
CDS-3UTR TCA 90 bp GGATGTTCAGTCTTGCAGATCTCAGACAAGTTACCGAGTCTGAATTTCAGTCCTCTGAACCTTTTGATCTaGAAGGCCCCATGGTCCCTT +
Preference number: 4 (lower is better)
Translates to: GCSVLQISDKLPSLNFSPLNLLI*KAPWSL
Trigger: AAGGGACCATGGGGCCTTTCAGATCAAAAGGTTCAG...AGGACTGAAATTCAGACTCGGTAACTTGTCTGAGATCTGCAAGACTGAACATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR TCA 90 bp AGGGGATGTTCAGTCTTGCAGATCTCAGACAAGTTACCGAGTCTGAATTTCAGTCTGAACCTTTTGATCTaGAAGGCCCCATGGTCCCTT +
Preference number: 4 (lower is better)
Translates to: RGCSVLQISDKLPSLNFSLNLLI*KAPWSL
Trigger: AAGGGACCATGGGGCCTTTCAGATCAAAAGGTTCAG...ACTGAAATTCAGACTCGGTAACTTGTCTGAGATCTGCAAGACTGAACATCCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR TCA 90 bp GAGAATGTAGATGCAATCATTATGCAATCTTCCAAAGAGGCTTTGACTCCCATCCCTTTCACTGCAAGCTaGGCTCCTGAGGGAGGACAT +
Preference number: 4 (lower is better)
Translates to: ENVDAIIMQSSKEALTPIPFTAS*APEGGH
Trigger: ATGTCCTCCCTCAGGAGCTCAGCTTGCAGTGAAAGG...GATGGGAGTCAAAGCCTCTTTGGAAGATTGCATAATGATTGCATCTACATTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
CDS-3UTR TCA 90 bp AAAACAAGATTGCGGGCTTGGATCCTGACTATGCTGACTGCTAAACAATTTGAACCTTTCACTGCAAGCTaGGCTCCTGAGGGAGGACAT +
Preference number: 4 (lower is better)
Translates to: KTRLRAWILTMLTAKQFEPFTAS*APEGGH
Trigger: ATGTCCTCCCTCAGGAGCTCAGCTTGCAGTGAAAGG...TTCAAATTGTTTAGCAGTCAGCATAGTCAGGATCCAAGCCCGCAATCTTGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR TCA 90 bp TTGGCTGATCTTAATAAGTGCACTCCGAGGGCAAAATTCTCTCCGGTTGTTACATCGCGTCACCTTTTCTaGCGATTTGTCATCCAGCCA +
Preference number: 4 (lower is better)
Translates to: LADLNKCTPRAKFSPVVTSRHLF*RFVIQP
Trigger: TGGCTGGATGACAAATCGTCAGAAAAGGTGACGCGA...TGTAACAACCGGAGAGAATTTTGCCCTCGGAGTGCACTTATTAAGATCAGCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR TCA 90 bp TATTCAAGCGCTTTTCATAGGATTGAATTGCCTGTTCCACTTTTCGCTTGTAGAGTCAACGCTGAGGTCTaGACAGCCTGGAAGGACGCT +
Preference number: 4 (lower is better)
Translates to: YSSAFHRIELPVPLFACRVNAEV*TAWKDA
Trigger: AGCGTCCTTCCAGGCTGTTCAGACCTCAGCGTTGAC...TCTACAAGCGAAAAGTGGAACAGGCAATTCAATCCTATGAAAAGCGCTTGAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR GCA 90 bp AGATTGCGGGCTTGGATCCTGACTATGCTGACTGCTAAACAATTTGAAAGTCCTTCTTGCCTCTGCAGCTaGTGCTCAGAGATGGTAGAA +
Preference number: 4 (lower is better)
Translates to: RLRAWILTMLTAKQFESPSCLCS*CSEMVE
Trigger: TTCTACCATCTCTGAGCAGCAGCTGCAGAGGCAAGA...AGGACTTTCAAATTGTTTAGCAGTCAGCATAGTCAGGATCCAAGCCCGCAATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000477737.6
CDS-3UTR GCA 90 bp TTCCTGTATGAACTGAATGATCTTGTCCTTCACCAAGTCCAGTTTGCTCTTCATCATCCCTCTTGCCTCTaGAGCTGCTGCTCAGAGATG +
Preference number: 4 (lower is better)
Translates to: FLYELNDLVLHQVQFALHHPSCL*SCCSEM
Trigger: CATCTCTGAGCAGCAGCTGCAGAGGCAAGAGGGATG...ATGAAGAGCAAACTGGACTTGGTGAAGGACAAGATCATTCAGTTCATACAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000422503.6
ENST00000432242.5
ENST00000448638.5
CDS-3UTR GCA 90 bp TCAAGGACTCAGAATAAAGGTCTTGCATCTTCTCCAGATCACTGTGACCCTGTTTTAATCCATCCCTCTTaGCTCTGCAGCTGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: SRTQNKGLASSPDHCDPVLIHPS*LCSCCS
Trigger: TGAGCAGCAGCTGCAGAGGCAAGAGGGATGGATTAA...AACAGGGTCACAGTGATCTGGAGAAGATGCAAGACCTTTATTCTGAGTCCTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000433678.5
ENST00000448638.5
CDS-3UTR GCA 90 bp AGATGCAATCATTATGCAATCTTCCAAAGAGGCTTTGACTCCCATCCTGTAGCCATGACACCAAAAATCTaGCGGCTCTTGCTGGTGAGC +
Preference number: 4 (lower is better)
Translates to: RCNHYAIFQRGFDSHPVAMTPKI*RLLLVS
Trigger: GCTCACCAGCAAGAGCCGGCAGATTTTTGGTGTCAT...GGCTACAGGATGGGAGTCAAAGCCTCTTTGGAAGATTGCATAATGATTGCATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
CDS-3UTR GCA 90 bp GGATGTTCAGTCTTGCAGATCTCAGACAAGTTACCGAGTCTGAATTTCAGTCCTTGTTCTCTCGGCAAATaGGTGGAATCTGCTGTGGGT +
Preference number: 4 (lower is better)
Translates to: GCSVLQISDKLPSLNFSPCSLGK*VESAVG
Trigger: ACCCACAGCAGATTCCACGCATTTGCCGAGAGAACA...AGGACTGAAATTCAGACTCGGTAACTTGTCTGAGATCTGCAAGACTGAACATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000477737.6
CDS-3UTR GCA 90 bp TTATATCCACAACCCCATCAGCGTGGCGGAAAGAGCAGTCGGCAAGCACATCATATCCTTTGTGGAGAATaGAGGAAATTCTACACACTC +
Preference number: 4 (lower is better)
Translates to: LYPQPHQRGGKSSRQAHHILCGE*RKFYTL
Trigger: GAGTGTGTAGAATTTCCTGCATTCTCCACAAAGGAT...ATGATGTGCTTGCCGACTGCTCTTTCCGCCACGCTGATGGGGTTGTGGATATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000422503.6
ENST00000432242.5
CDS-3UTR GCA 90 bp CTCATGCTGTCTTCAGCTGTATGGAATGAAGGAAACAGCTCCAGAGCGAGAGACGTCTTCTGGATTCGATaGAATCTCAACAGAGGTTGT +
Preference number: 4 (lower is better)
Translates to: LMLSSAVWNEGNSSRARDVFWIR*NLNRGC
Trigger: ACAACCTCTGTTGAGATTGCATCGAATCCAGAAGAC...GTCTCTCGCTCTGGAGCTGTTTCCTTCATTCCATACAGCTGAAGACAGCATGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422503.6
ENST00000432242.5
ENST00000433678.5
CDS-3UTR GCA 90 bp CTTTATGTCTCTAATCCAGGACTGAGCCTGTTCCAAATTATCTTCATTGACTTCGTCTCCGCACTGGTCTaGACGGACTCATTCTCCGGT +
Preference number: 4 (lower is better)
Translates to: LYVSNPGLSLFQIIFIDFVSALV*TDSFSG
Trigger: ACCGGAGAATGAGTCCGTGCAGACCAGTGCGGAGAC...GAAGTCAATGAAGATAATTTGGAACAGGCTCAGTCCTGGATTAGAGACATAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422503.6
CDS-3UTR GCA 90 bp ATAAAAATGGAACTCTCCTCCAGTCAAAGCAGCAACCTCTTTCAAAAACCTGTTGTCTCCGCACTGGTCTaGACGGACTCATTCTCCGGT +
Preference number: 4 (lower is better)
Translates to: IKMELSSSQSSNLFQKPVVSALV*TDSFSG
Trigger: ACCGGAGAATGAGTCCGTGCAGACCAGTGCGGAGAC...AACAGGTTTTTGAAAGAGGTTGCTGCTTTGACTGGAGGAGAGTTCCATTTTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000433678.5
CDS-3UTR GCA 90 bp CTCATGCTGTCTTCAGCTGTATGGAATGAAGGAAACAGCTCCAGAGCGAGAGACCATGGACAAACCTGCTaGAATATTTTGCATGGACTG +
Preference number: 4 (lower is better)
Translates to: LMLSSAVWNEGNSSRARDHGQTC*NILHGL
Trigger: CAGTCCATGCAAAATATTGCAGCAGGTTTGTCCATG...GTCTCTCGCTCTGGAGCTGTTTCCTTCATTCCATACAGCTGAAGACAGCATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422503.6
ENST00000433678.5
CDS-3UTR GCA 90 bp AAAGAGTCAGATCTTCATTCTGAACAGCCTCTGGGGGAGTGGGATCCTTGCAACGGTCAGAAGGTAGATTaGCTGTGTTTCTTTATCAGC +
Preference number: 4 (lower is better)
Translates to: KESDLHSEQPLGEWDPCNGQKVD*LCFFIS
Trigger: GCTGATAAAGAAACACAGGCAATCTACCTTCTGACC...GTTGCAAGGATCCCACTCCCCCAGAGGCTGTTCAGAATGAAGATCTGACTCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000433678.5
ENST00000448638.5
ENST00000495571.5
CDS-3UTR GCA 90 bp TATATCCACAACCCCATCAGCGTGGCGGAAAGAGCAGTCGGCAAGCACATCATATTTCCTTTTGATGCTTaGTGTCTCCATCCTTTTCTG +
Preference number: 4 (lower is better)
Translates to: YIHNPISVAERAVGKHIIFPFDA*CLHPFL
Trigger: CAGAAAAGGATGGAGACAGCAAGCATCAAAAGGAAA...TATGATGTGCTTGCCGACTGCTCTTTCCGCCACGCTGATGGGGTTGTGGATATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
CDS-3UTR GCA 90 bp GTTTGCATAATTCTTCTTGGCAGCCTCCTGGAGTTCCATGGCCTGCTGGATGTACCTCAGCCAGCAAGATaGTCATTTCTTTGTCACTTA +
Preference number: 4 (lower is better)
Translates to: VCIILLGSLLEFHGLLDVPQPAR*SFLCHL
Trigger: TAAGTGACAAAGAAATGAGCATCTTGCTGGCTGAGG...TACATCCAGCAGGCCATGGAACTCCAGGAGGCTGCCAAGAAGAATTATGCAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR GCA 90 bp TGGAGTTCCATGGCCTGCTGGATGTACATTTTCCCAGCTAGGATTTCACTTTCCTCTTATTTGTGTCGTTaGACACATGTGCCAGAGGGA +
Preference number: 4 (lower is better)
Translates to: WSSMACWMYIFPARISLSSYLCR*THVPEG
Trigger: TCCCTCTGGCACATGTGTGCAACGACACAAATAAGA...GGAAAGTGAAATCCTAGCTGGGAAAATGTACATCCAGCAGGCCATGGAACTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR GCA 90 bp TCCTGGAGTTCCATGGCCTGCTGGATGTACATTTTCCCAGCTAGGATTTCACTTTCTTATTTGTGTCGTTaGACACATGTGCCAGAGGGA +
Preference number: 4 (lower is better)
Translates to: SWSSMACWMYIFPARISLSYLCR*THVPEG
Trigger: TCCCTCTGGCACATGTGTGCAACGACACAAATAAGA...AAGTGAAATCCTAGCTGGGAAAATGTACATCCAGCAGGCCATGGAACTCCAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR CCA 90 bp TCAAGGACTCAGAATAAAGGTCTTGCATCTTCTCCAGATCACTGTGACCCTGTTGGAGGAGAAGCTCCTTaGATTCTTCAGGAACATCCC +
Preference number: 4 (lower is better)
Translates to: SRTQNKGLASSPDHCDPVGGEAP*ILQEHP
Trigger: GGGATGTTCCTGAAGAATCCAAGGAGCTTCTCCTCC...AACAGGGTCACAGTGATCTGGAGAAGATGCAAGACCTTTATTCTGAGTCCTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000433678.5
CDS-3UTR CCA 90 bp GCTGTATGGAATGAAGGAAACAGCTCCAGAGCGAGAGACTTGGGCTTGAAGCTCTGTCACCATCCTTTGTaGAGAATGCAGGAAATTCTA +
Preference number: 4 (lower is better)
Translates to: AVWNEGNSSRARDLGLKLCHHPL*RMQEIL
Trigger: TAGAATTTCCTGCATTCTCCACAAAGGATGGTGACA...GAGCTTCAAGCCCAAGTCTCTCGCTCTGGAGCTGTTTCCTTCATTCCATACAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422503.6
ENST00000432242.5
ENST00000433678.5
CDS-3UTR CCA 90 bp TCAAGGACTCAGAATAAAGGTCTTGCATCTTCTCCAGATCACTGTGACCCTGTTTCTGACTCCAGCTCCTaGAGGGAGTTTTCCTTTCAG +
Preference number: 4 (lower is better)
Translates to: SRTQNKGLASSPDHCDPVSDSSS*REFSFQ
Trigger: CTGAAAGGAAAACTCCCTCCAGGAGCTGGAGTCAGA...AACAGGGTCACAGTGATCTGGAGAAGATGCAAGACCTTTATTCTGAGTCCTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000433678.5
CDS-3UTR CCA 90 bp GGATGTTCAGTCTTGCAGATCTCAGACAAGTTACCGAGTCTGAATTTCAGTCCTTCTGACTCCAGCTCCTaGAGGGAGTTTTCCTTTCAG +
Preference number: 4 (lower is better)
Translates to: GCSVLQISDKLPSLNFSPSDSSS*REFSFQ
Trigger: CTGAAAGGAAAACTCCCTCCAGGAGCTGGAGTCAGA...AGGACTGAAATTCAGACTCGGTAACTTGTCTGAGATCTGCAAGACTGAACATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000477737.6
CDS-3UTR CCA 90 bp AAAGAGTCAGATCTTCATTCTGAACAGCCTCTGGGGGAGTGGGATCCTTGCAACTACAAGGATAGCTTCTaGGCCTTCAAGCCATATTTC +
Preference number: 4 (lower is better)
Translates to: KESDLHSEQPLGEWDPCNYKDSF*AFKPYF
Trigger: GAAATATGGCTTGAAGGCCCAGAAGCTATCCTTGTA...GTTGCAAGGATCCCACTCCCCCAGAGGCTGTTCAGAATGAAGATCTGACTCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000433678.5
ENST00000448638.5
CDS-3UTR CCA 90 bp CTCATGCTGTCTTCAGCTGTATGGAATGAAGGAAACAGCTCCAGAGCGAGAGACACTCATTCTCCGGTTTaGCTTTTATATCCACAACCC +
Preference number: 4 (lower is better)
Translates to: LMLSSAVWNEGNSSRARDTHSPV*LLYPQP
Trigger: GGGTTGTGGATATAAAAGCCAAACCGGAGAATGAGT...GTCTCTCGCTCTGGAGCTGTTTCCTTCATTCCATACAGCTGAAGACAGCATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422503.6
ENST00000432242.5
ENST00000433678.5
CDS-3UTR CCA 90 bp CAAGGACTCAGAATAAAGGTCTTGCATCTTCTCCAGATCACTGTGACCCTGTTCTTGGTAATGTTGACGTaGACCAAGCTCCCATCCTTC +
Preference number: 4 (lower is better)
Translates to: QGLRIKVLHLLQITVTLFLVMLT*TKLPSF
Trigger: GAAGGATGGGAGCTTGGTCCACGTCAACATTACCAA...GAACAGGGTCACAGTGATCTGGAGAAGATGCAAGACCTTTATTCTGAGTCCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433678.5
CDS-3UTR CCA 90 bp ACGTTTGACCTGGTCTATAACTGTTTCAGGTGGAATGATACACATGACAGTCTCATTCTGAACAGCCTCTaGGGGAGTGGGATCCTTGCA +
Preference number: 4 (lower is better)
Translates to: TFDLVYNCFRWNDTHDSLILNSL*GSGILA
Trigger: TGCAAGGATCCCACTCCCCCAGAGGCTGTTCAGAAT...GAGACTGTCATGTGTATCATTCCACCTGAAACAGTTATAGACCAGGTCAAACGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000433678.5
ENST00000495571.5
CDS-3UTR CCA 90 bp CTTTGTTGGATTTCCTTGCAATTTCTGTTGCTCTCCCGGGGCCTTGTTTGCATAGAGTTTCCTCATCTGTaGCTCAGAACTGATACTCCC +
Preference number: 4 (lower is better)
Translates to: LCWISLQFLLLSRGLVCIEFPHL*LRTDTP
Trigger: GGGAGTATCAGTTCTGAGCCACAGATGAGGAAACTC...TATGCAAACAAGGCCCCGGGAGAGCAACAGAAATTGCAAGGAAATCCAACAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000495571.5
CDS-3UTR CCA 90 bp TCCCGGGGCCTTGTTTGCATAATTCTTCTTGGCAGCCTCCTGGAGTTCCATGGCTATAACTGTTTCAGGTaGAATGATACACATGACAGT +
Preference number: 4 (lower is better)
Translates to: SRGLVCIILLGSLLEFHGYNCFR*NDTHDS
Trigger: ACTGTCATGTGTATCATTCCACCTGAAACAGTTATA...GCCATGGAACTCCAGGAGGCTGCCAAGAAGAATTATGCAAACAAGGCCCCGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000495571.5
CDS-3UTR CCA 90 bp AGGCCCCATGGTCCCTTCAACATATTCAGAGATGAAGTTTGTGTTGAATCGACAGTCCGCTTCTTTCAGTaGCCAGAAGAGGAAAGCAGA +
Preference number: 4 (lower is better)
Translates to: RPHGPFNIFRDEVCVESTVRFFQ*PEEESR
Trigger: TCTGCTTTCCTCTTCTGGCCACTGAAAGAAGCGGAC...TGTCGATTCAACACAAACTTCATCTCTGAATATGTTGAAGGGACCATGGGGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR CCA 90 bp AAAACAAGATTGCGGGCTTGGATCCTGACTATGCTGACTGCTAAACAATTTGAACTTTGCTGCTGTGGGTaGCTTGGAGAGTACAGGGCA +
Preference number: 4 (lower is better)
Translates to: KTRLRAWILTMLTAKQFELCCCG*LGEYRA
Trigger: TGCCCTGTACTCTCCAAGCCACCCACAGCAGCAAAG...TTCAAATTGTTTAGCAGTCAGCATAGTCAGGATCCAAGCCCGCAATCTTGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CCA 90 bp ATGAAAATGTCAGGAAACTATACAGTAGGGGATGTTCAGTCTTGCAGATCTCAGCTTTGCTGCTGTGGGTaGCTTGGAGAGTACAGGGCA +
Preference number: 4 (lower is better)
Translates to: MKMSGNYTVGDVQSCRSQLCCCG*LGEYRA
Trigger: TGCCCTGTACTCTCCAAGCCACCCACAGCAGCAAAG...CTGAGATCTGCAAGACTGAACATCCCCTACTGTATAGTTTCCTGACATTTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CCA 90 bp AAAACAAGATTGCGGGCTTGGATCCTGACTATGCTGACTGCTAAACAATTTGAAAGCCCTTTGCTGCTGTaGGTGGCTTGGAGAGTACAG +
Preference number: 4 (lower is better)
Translates to: KTRLRAWILTMLTAKQFESPLLL*VAWRVQ
Trigger: CTGTACTCTCCAAGCCACCCACAGCAGCAAAGGGCT...TTCAAATTGTTTAGCAGTCAGCATAGTCAGGATCCAAGCCCGCAATCTTGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
3UTR CAA 72 bp CCACCAGTCCATGATCAAGGACTCAGAATAAAGGTCTaGCATCTTCTCCAGATCACTGTGACCCTGTTCCAT +
Preference number: 4 (lower is better)
Translates to: PPVHDQGLRIKV*HLLQITVTLFH
Trigger: ATGGAACAGGGTCACAGTGATCTGGAGAAGATGCAAGACCTTTATTCTGAGTCCTTGATCATGGACTGGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000433678.5
ENST00000448638.5
ENST00000495571.5
CDS-3UTR TCA 90 bp CCAGCTAGGATTTCACTTTCCAGCATCGACAGCTCTTTCAGTGAAATGGGCCAATGGGAATCCGATCTGTaGCAAAATCTGTTTCAAGGT +
Preference number: 4 (lower is better)
Translates to: PARISLSSIDSSFSEMGQWESDL*QNLFQG
Trigger: ACCTTGAAACAGATTTTGTCACAGATCGGATTCCCA...TTGGCCCATTTCACTGAAAGAGCTGTCGATGCTGGAAAGTGAAATCCTAGCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432242.5
CDS-3UTR TCA 90 bp TTCCTGTATGAACTGAATGATCTTGTCCTTCACCAAGTCCAGTTTGCTCTTCATCGCACTGTTCCAAGATaGCACCAAAAATCTGCCGGC +
Preference number: 4 (lower is better)
Translates to: FLYELNDLVLHQVQFALHRTVPR*HQKSAG
Trigger: GCCGGCAGATTTTTGGTGTCATCTTGGAACAGTGCG...ATGAAGAGCAAACTGGACTTGGTGAAGGACAAGATCATTCAGTTCATACAGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
CDS-3UTR TCA 90 bp TTCCTGTATGAACTGAATGATCTTGTCCTTCACCAAGTCCAGTTTGCTCTTCATTTGAACTCGGTTATGTaGGCCACCTGCTCCTGGAGA +
Preference number: 4 (lower is better)
Translates to: FLYELNDLVLHQVQFALHLNSVM*ATCSWR
Trigger: TCTCCAGGAGCAGGTGGCTCACATAACCGAGTTCAA...ATGAAGAGCAAACTGGACTTGGTGAAGGACAAGATCATTCAGTTCATACAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
CDS-3UTR TCA 90 bp AAAACAAGATTGCGGGCTTGGATCCTGACTATGCTGACTGCTAAACAATTTGAACTTCTCCTCTGGCGTTaGAGGACACTGTGTAGACTG +
Preference number: 4 (lower is better)
Translates to: KTRLRAWILTMLTAKQFELLLWR*RTLCRL
Trigger: CAGTCTACACAGTGTCCTTCAACGCCAGAGGAGAAG...TTCAAATTGTTTAGCAGTCAGCATAGTCAGGATCCAAGCCCGCAATCTTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000477737.6
CDS-3UTR TCA 90 bp ATGGAACTCTCCTCCAGTCAAAGCAGCAACCTCTTTCAAAAACCTGTTTGCAATCTTCCAAAGAGGCTTTaGCTCCCATCCTGTAGCCAT +
Preference number: 4 (lower is better)
Translates to: MELSSSQSSNLFQKPVCNLPKRL*LPSCSH
Trigger: ATGGCTACAGGATGGGAGTCAAAGCCTCTTTGGAAG...ATTGCAAACAGGTTTTTGAAAGAGGTTGCTGCTTTGACTGGAGGAGAGTTCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000433678.5
ENST00000448638.5
CDS-3UTR TCA 90 bp TCAGTTTACCTCATCAAAGACCTTAGACACGACATGCTTGTCCAGGACGGGAACTTGCTCTTCATTGAGTaGGACGTGTCAATGAGAATG +
Preference number: 4 (lower is better)
Translates to: SVYLIKDLRHDMLVQDGNLLFIE*DVSMRM
Trigger: CATTCTCATTGACACGTCTCACTCAATGAAGAGCAA...GTTCCCGTCCTGGACAAGCATGTCGTGTCTAAGGTCTTTGATGAGGTAAACTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416277.5
ENST00000448638.5
CDS-3UTR TCA 90 bp CTTTGGGTATCACAATTTTGGCAAACACATAATCTCCAACCTGGAGCAGCGGGCTGTTCCTGTATGAACTaGATGATCTTGTCCTTCACC +
Preference number: 4 (lower is better)
Translates to: LWVSQFWQTHNLQPGAAGCSCMN*MILSFT
Trigger: GGTGAAGGACAAGATCATTCAGTTCATACAGGAACA...GCCCGCTGCTCCAGGTTGGAGATTATGTGTTTGCCAAAATTGTGATACCCAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000495571.5
CDS-3UTR TCA 90 bp AGATGCAATCATTATGCAATCTTCCAAAGAGGCTTTGACTCCCATCCTGTAGCCCGCCAAGCAACTGCTTaGCCATCAAACTTCACAAAG +
Preference number: 4 (lower is better)
Translates to: RCNHYAIFQRGFDSHPVARQATA*PSNFTK
Trigger: CTTTGTGAAGTTTGATGGTCAAGCAGTTGCTTGGCG...GGCTACAGGATGGGAGTCAAAGCCTCTTTGGAAGATTGCATAATGATTGCATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000422503.6
ENST00000432242.5
ENST00000448638.5
CDS-3UTR TCA 90 bp TTAGAGTCCCAGGTGTCTTCTGGATTCGATGCAATCTCAACAGAGGTTGTTTCTCGCCAAGCAACTGCTTaGCCATCAAACTTCACAAAG +
Preference number: 4 (lower is better)
Translates to: LESQVSSGFDAISTEVVSRQATA*PSNFTK
Trigger: CTTTGTGAAGTTTGATGGTCAAGCAGTTGCTTGGCG...AGAAACAACCTCTGTTGAGATTGCATCGAATCCAGAAGACACCTGGGACTCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422503.6
ENST00000432242.5
CDS-3UTR TCA 90 bp TCAAGGACTCAGAATAAAGGTCTTGCATCTTCTCCAGATCACTGTGACCCTGTTCGCCAAGCAACTGCTTaGCCATCAAACTTCACAAAG +
Preference number: 4 (lower is better)
Translates to: SRTQNKGLASSPDHCDPVRQATA*PSNFTK
Trigger: CTTTGTGAAGTTTGATGGTCAAGCAGTTGCTTGGCG...AACAGGGTCACAGTGATCTGGAGAAGATGCAAGACCTTTATTCTGAGTCCTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000433678.5
ENST00000448638.5
ENST00000495571.5
CDS-3UTR TCA 90 bp TGTCATCCAGCCACTCCTCAGCCAGCAAGATGCTCATTTCTTTGTCACTTAGAGTCTCTAATCCAGGACTaGGCCTGTTCCAAATTATCT +
Preference number: 4 (lower is better)
Translates to: CHPATPQPARCSFLCHLESLIQD*ACSKLS
Trigger: AGATAATTTGGAACAGGCTCAGTCCTGGATTAGAGA...CTCTAAGTGACAAAGAAATGAGCATCTTGCTGGCTGAGGAGTGGCTGGATGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
ENST00000495571.5
CDS-3UTR TCA 90 bp GAGAATGTAGATGCAATCATTATGCAATCTTCCAAAGAGGCTTTGACTCCCATCGTCAGATCTTCATTCTaGACAGCCTCTGGGGGAGTG +
Preference number: 4 (lower is better)
Translates to: ENVDAIIMQSSKEALTPIVRSSF*TASGGV
Trigger: CACTCCCCCAGAGGCTGTTCAGAATGAAGATCTGAC...GATGGGAGTCAAAGCCTCTTTGGAAGATTGCATAATGATTGCATCTACATTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
CDS-3UTR TCA 90 bp CAAGGACTCAGAATAAAGGTCTTGCATCTTCTCCAGATCACTGTGACCCTGTTCTTCTCCAGATCACTGTaGCCCTGTTCCATTTCCTTA +
Preference number: 4 (lower is better)
Translates to: QGLRIKVLHLLQITVTLFFSRSL*PCSISL
Trigger: TAAGGAAATGGAACAGGGTCACAGTGATCTGGAGAA...GAACAGGGTCACAGTGATCTGGAGAAGATGCAAGACCTTTATTCTGAGTCCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000433678.5
ENST00000448638.5
ENST00000495571.5
CDS-3UTR TCA 90 bp CCACCAGTCCATGATCAAGGACTCAGAATAAAGGTCTTGCATCTTCTCCAGATCTTCTCCAGATCACTGTaGCCCTGTTCCATTTCCTTA +
Preference number: 4 (lower is better)
Translates to: PPVHDQGLRIKVLHLLQIFSRSL*PCSISL
Trigger: TAAGGAAATGGAACAGGGTCACAGTGATCTGGAGAA...GATCTGGAGAAGATGCAAGACCTTTATTCTGAGTCCTTGATCATGGACTGGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000433678.5
ENST00000448638.5
ENST00000495571.5
CDS-3UTR TCA 90 bp AAGACACATCTGAAGAATCGTGGTCATAAACCTGGCTTCCTTCTCGCGTCACCTTGTACCACCAGTCCATaGTCAAGGACTCAGAATAAA +
Preference number: 4 (lower is better)
Translates to: KTHLKNRGHKPGFLLASPCTTSP*SRTQNK
Trigger: TTTATTCTGAGTCCTTGATCATGGACTGGTGGTACA...AGGTGACGCGAGAAGGAAGCCAGGTTTATGACCACGATTCTTCAGATGTGTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
ENST00000495571.5
CDS-3UTR TCA 90 bp AAGACACATCTGAAGAATCGTGGTCATAAACCTGGCTTCCTTCTCGCGTCACCTGAATCGACATCAGATTaGGGCTTTGCACACTTTTCT +
Preference number: 4 (lower is better)
Translates to: KTHLKNRGHKPGFLLASPESTSD*GFAHFS
Trigger: AGAAAAGTGTGCAAAGCCTCAATCTGATGTCGATTC...AGGTGACGCGAGAAGGAAGCCAGGTTTATGACCACGATTCTTCAGATGTGTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR TCA 90 bp AGAATAAAGGTCTTGCATCTTCTCCAGATCACTGTGACCCTGTTCCATTTCCTTCTGAACCTTTTGATCTaGAAGGCCCCATGGTCCCTT +
Preference number: 4 (lower is better)
Translates to: RIKVLHLLQITVTLFHFLLNLLI*KAPWSL
Trigger: AAGGGACCATGGGGCCTTTCAGATCAAAAGGTTCAG...AAGGAAATGGAACAGGGTCACAGTGATCTGGAGAAGATGCAAGACCTTTATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
ENST00000495571.5
CDS-3UTR TCA 90 bp TATAAAAATGGAACTCTCCTCCAGTCAAAGCAGCAACCTCTTTCAAAAACCTGTCCTTTCACTGCAAGCTaGGCTCCTGAGGGAGGACAT +
Preference number: 4 (lower is better)
Translates to: YKNGTLLQSKQQPLSKTCPFTAS*APEGGH
Trigger: ATGTCCTCCCTCAGGAGCTCAGCTTGCAGTGAAAGG...ACAGGTTTTTGAAAGAGGTTGCTGCTTTGACTGGAGGAGAGTTCCATTTTTATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
ENST00000495571.5
CDS-3UTR TCA 90 bp AGATTGCGGGCTTGGATCCTGACTATGCTGACTGCTAAACAATTTGAAAGTCCTTTCGCTTGTAGATATTaGGTTTGGCTCCTTGGGGGT +
Preference number: 4 (lower is better)
Translates to: RLRAWILTMLTAKQFESPFACRY*VWLLGG
Trigger: ACCCCCAAGGAGCCAAACTCAATATCTACAAGCGAA...AGGACTTTCAAATTGTTTAGCAGTCAGCATAGTCAGGATCCAAGCCCGCAATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR TCA 90 bp TTGGCTGATCTTAATAAGTGCACTCCGAGGGCAAAATTCTCTCCGGTTGTTACATTCGCTTGTAGATATTaGGTTTGGCTCCTTGGGGGT +
Preference number: 4 (lower is better)
Translates to: LADLNKCTPRAKFSPVVTFACRY*VWLLGG
Trigger: ACCCCCAAGGAGCCAAACTCAATATCTACAAGCGAA...TGTAACAACCGGAGAGAATTTTGCCCTCGGAGTGCACTTATTAAGATCAGCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR TCA 90 bp GTTTTTATTCTGGTTTCGGGCTCAATTAGAGTTACCTACAACAGACTCCGCGGATTCGCTTGTAGATATTaGGTTTGGCTCCTTGGGGGT +
Preference number: 4 (lower is better)
Translates to: VFILVSGSIRVTYNRLRGFACRY*VWLLGG
Trigger: ACCCCCAAGGAGCCAAACTCAATATCTACAAGCGAA...TCCGCGGAGTCTGTTGTAGGTAACTCTAATTGAGCCCGAAACCAGAATAAAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000495571.5
ENST00000614454.1
CDS-3UTR TCA 90 bp AGAATAAAGGTCTTGCATCTTCTCCAGATCACTGTGACCCTGTTCCATTTCCTTTCTGTGGCTCAGAACTaGTACTCCCTCCTTAAACGG +
Preference number: 4 (lower is better)
Translates to: RIKVLHLLQITVTLFHFLSVAQN*YSLLKR
Trigger: CCGTTTAAGGAGGGAGTATCAGTTCTGAGCCACAGA...AAGGAAATGGAACAGGGTCACAGTGATCTGGAGAAGATGCAAGACCTTTATTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000433678.5
ENST00000495571.5
CDS-3UTR TCA 90 bp AGATGCAATCATTATGCAATCTTCCAAAGAGGCTTTGACTCCCATCCTGTAGCCTTCAGCTGTATGGAATaGAGGAAACAGCTCCAGAGC +
Preference number: 4 (lower is better)
Translates to: RCNHYAIFQRGFDSHPVAFSCME*RKQLQS
Trigger: GCTCTGGAGCTGTTTCCTTCATTCCATACAGCTGAA...GGCTACAGGATGGGAGTCAAAGCCTCTTTGGAAGATTGCATAATGATTGCATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422503.6
ENST00000432242.5
CDS-3UTR GCA 90 bp TCAGTCTTGCAGATCTCAGACAAGTTACCGAGTCTGAATTTCAGTCCTAATATTCATCCCTCTTGCCTCTaGAGCTGCTGCTCAGAGATG +
Preference number: 4 (lower is better)
Translates to: SVLQISDKLPSLNFSPNIHPSCL*SCCSEM
Trigger: CATCTCTGAGCAGCAGCTGCAGAGGCAAGAGGGATG...AATATTAGGACTGAAATTCAGACTCGGTAACTTGTCTGAGATCTGCAAGACTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000477737.6
CDS-3UTR GCA 90 bp AAAGAGTCAGATCTTCATTCTGAACAGCCTCTGGGGGAGTGGGATCCTTGCAACTCAGATTGTATACTCTaGCATCTTCTGCTCTGTAGA +
Preference number: 4 (lower is better)
Translates to: KESDLHSEQPLGEWDPCNSDCIL*HLLLCR
Trigger: TCTACAGAGCAGAAGATGGCAGAGTATACAATCTGA...GTTGCAAGGATCCCACTCCCCCAGAGGCTGTTCAGAATGAAGATCTGACTCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000433678.5
ENST00000448638.5
CDS-3UTR GCA 90 bp ATAAAAATGGAACTCTCCTCCAGTCAAAGCAGCAACCTCTTTCAAAAACCTGTTGCTCCCCCTCCAGAATaGCGCCAAAATCCAGCACTA +
Preference number: 4 (lower is better)
Translates to: IKMELSSSQSSNLFQKPVAPPPE*RQNPAL
Trigger: TAGTGCTGGATTTTGGCGGCATTCTGGAGGGGGAGC...AACAGGTTTTTGAAAGAGGTTGCTGCTTTGACTGGAGGAGAGTTCCATTTTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000433678.5
ENST00000448638.5
CDS-3UTR GCA 90 bp AATGGAACTCTCCTCCAGTCAAAGCAGCAACCTCTTTCAAAAACCTGTTTGCAATGTTCTCTCGGCAAATaGGTGGAATCTGCTGTGGGT +
Preference number: 4 (lower is better)
Translates to: NGTLLQSKQQPLSKTCLQCSLGK*VESAVG
Trigger: ACCCACAGCAGATTCCACGCATTTGCCGAGAGAACA...TTGCAAACAGGTTTTTGAAAGAGGTTGCTGCTTTGACTGGAGGAGAGTTCCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000433678.5
CDS-3UTR GCA 90 bp CTGTACCACTTGCACTTCTCTTTGGTAATGTTGACGTGGACCAAGCTCCCATCCATCCTTTGTGGAGAATaGAGGAAATTCTACACACTC +
Preference number: 4 (lower is better)
Translates to: LYHLHFSLVMLTWTKLPSILCGE*RKFYTL
Trigger: GAGTGTGTAGAATTTCCTGCATTCTCCACAAAGGAT...GGATGGGAGCTTGGTCCACGTCAACATTACCAAAGAGAAGTGCAAGTGGTACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422503.6
CDS-3UTR GCA 90 bp AAAGAGCAGTCGGCAAGCACATCATACAAGGATAGCTTCTGGGCCTTCAAGCCAATCCTTTGTGGAGAATaGAGGAAATTCTACACACTC +
Preference number: 4 (lower is better)
Translates to: KEQSASTSYKDSFWAFKPILCGE*RKFYTL
Trigger: GAGTGTGTAGAATTTCCTGCATTCTCCACAAAGGAT...TGGCTTGAAGGCCCAGAAGCTATCCTTGTATGATGTGCTTGCCGACTGCTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422503.6
ENST00000432242.5
CDS-3UTR GCA 90 bp TTTGATCTGAAAGGCCCCATGGTCCCTTCAACATATTCAGAGATGAAGTTTGTGGCTTCCTCCATCTCTTaGCAAACGAGAAACACGTCC +
Preference number: 4 (lower is better)
Translates to: FDLKGPMVPSTYSEMKFVASSIS*QTRNTS
Trigger: GGACGTGTTTCTCGTTTGGCAAGAGATGGAGGAAGC...CACAAACTTCATCTCTGAATATGTTGAAGGGACCATGGGGCCTTTCAGATCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
CDS-3UTR GCA 90 bp AATGGAACTCTCCTCCAGTCAAAGCAGCAACCTCTTTCAAAAACCTGTTTGCAAGCTTCCTCCATCTCTTaGCAAACGAGAAACACGTCC +
Preference number: 4 (lower is better)
Translates to: NGTLLQSKQQPLSKTCLQASSIS*QTRNTS
Trigger: GGACGTGTTTCTCGTTTGGCAAGAGATGGAGGAAGC...TTGCAAACAGGTTTTTGAAAGAGGTTGCTGCTTTGACTGGAGGAGAGTTCCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000433678.5
ENST00000448638.5
CDS-3UTR GCA 90 bp CTGTGGGTCTTGGCACTCAGATCCTTTAGAAAAGCTATAGTGCCTTCTCCTCTGTTCAAGCCATATTTCTaGAGCCATGTCTTAGAGTCC +
Preference number: 4 (lower is better)
Translates to: LWVLALRSFRKAIVPSPLFKPYF*SHVLES
Trigger: GGACTCTAAGACATGGCTGCAGAAATATGGCTTGAA...CAGAGGAGAAGGCACTATAGCTTTTCTAAAGGATCTGAGTGCCAAGACCCACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422503.6
ENST00000432242.5
CDS-3UTR GCA 90 bp TTTGATCTGAAAGGCCCCATGGTCCCTTCAACATATTCAGAGATGAAGTTTGTGACCTTAGACACGACATaGTTGTCCAGGACGGGAACA +
Preference number: 4 (lower is better)
Translates to: FDLKGPMVPSTYSEMKFVTLDTT*LSRTGT
Trigger: TGTTCCCGTCCTGGACAAGCATGTCGTGTCTAAGGT...CACAAACTTCATCTCTGAATATGTTGAAGGGACCATGGGGCCTTTCAGATCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR GCA 90 bp TCAAGGACTCAGAATAAAGGTCTTGCATCTTCTCCAGATCACTGTGACCCTGTTTGGAGTTCCATGGCCTaGTGGATGTACATTTTCCCA +
Preference number: 4 (lower is better)
Translates to: SRTQNKGLASSPDHCDPVWSSMA*WMYIFP
Trigger: TGGGAAAATGTACATCCAGCAGGCCATGGAACTCCA...AACAGGGTCACAGTGATCTGGAGAAGATGCAAGACCTTTATTCTGAGTCCTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000495571.5
CDS-3UTR GCA 90 bp TATTCAAGCGCTTTTCATAGGATTGAATTGCCTGTTCCACTTTTCGCTTGTAGACCACCAGTGCTTGGGTaGGGCTCACACACTTCTTCA +
Preference number: 4 (lower is better)
Translates to: YSSAFHRIELPVPLFACRPPVLG*GSHTSS
Trigger: TGAAGAAGTGTGTGAGCCGCACCCAAGCACTGGTGG...TCTACAAGCGAAAAGTGGAACAGGCAATTCAATCCTATGAAAAGCGCTTGAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR GCA 90 bp CTTTGGGTATCACAATTTTGGCAAACACATAATCTCCAACCTGGAGCAGCGGGCTTTTCTGTGGCCACATaGTTATTGGGAAGTGCTATG +
Preference number: 4 (lower is better)
Translates to: LWVSQFWQTHNLQPGAAGFSVAT*LLGSAM
Trigger: CATAGCACTTCCCAATAAGCATGTGGCCACAGAAAA...GCCCGCTGCTCCAGGTTGGAGATTATGTGTTTGCCAAAATTGTGATACCCAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR GCA 90 bp GAGCAAGAGAGCGCATACTTGTTTTGGCTGATCTTAATAAGTGCACTCCGAGGGTTTTCTGTGGCCACATaGTTATTGGGAAGTGCTATG +
Preference number: 4 (lower is better)
Translates to: EQESAYLFWLILISALRGFSVAT*LLGSAM
Trigger: CATAGCACTTCCCAATAAGCATGTGGCCACAGAAAA...CCCTCGGAGTGCACTTATTAAGATCAGCCAAAACAAGTATGCGCTCTCTTGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR GCA 90 bp AGAGTTTTTATTCTGGTTTCGGGCTCAATTAGAGTTACCTACAACAGACTCCGCGTCGTTGCACACATGTaGCAGAGGGAACACCTCTTT +
Preference number: 4 (lower is better)
Translates to: RVFILVSGSIRVTYNRLRVVAHM*QREHLF
Trigger: AAAGAGGTGTTCCCTCTGGCACATGTGTGCAACGAC...GCGGAGTCTGTTGTAGGTAACTCTAATTGAGCCCGAAACCAGAATAAAAACTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614454.1
CDS-3UTR CCA 90 bp GAATGCAGGAAATTCTACACACTCTGTTCTCTCGGCAAATGCGTGGAATCTGCTTGCTCTGTAGAGCTGTaGAAACAGACCATCAGCATA +
Preference number: 4 (lower is better)
Translates to: ECRKFYTLCSLGKCVESACSVEL*KQTISI
Trigger: TATGCTGATGGTCTGTTTCCACAGCTCTACAGAGCA...AGCAGATTCCACGCATTTGCCGAGAGAACAGAGTGTGTAGAATTTCCTGCATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422503.6
ENST00000432242.5
CDS-3UTR CCA 90 bp ACACATCTGAAGAATCGTGGTCATAAACCTGGCTTCCTTCTCGCGTCACCTTTTATCTGCTGTGGGTCTTaGCACTCAGATCCTTTAGAA +
Preference number: 4 (lower is better)
Translates to: THLKNRGHKPGFLLASPFICCGS*HSDPLE
Trigger: TTCTAAAGGATCTGAGTGCCAAGACCCACAGCAGAT...AAAAGGTGACGCGAGAAGGAAGCCAGGTTTATGACCACGATTCTTCAGATGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416277.5
ENST00000432242.5
CDS-3UTR CCA 90 bp TTTGACCTGGTCTATAACTGTTTCAGGTGGCTGATCAGGTCTCCCATCGGTCAGTGTCACCATCCTTTGTaGAGAATGCAGGAAATTCTA +
Preference number: 4 (lower is better)
Translates to: FDLVYNCFRWLIRSPIGQCHHPL*RMQEIL
Trigger: TAGAATTTCCTGCATTCTCCACAAAGGATGGTGACA...CTGACCGATGGGAGACCTGATCAGCCACCTGAAACAGTTATAGACCAGGTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416277.5
CDS-3UTR CCA 90 bp CTGTGGGTCTTGGCACTCAGATCCTTTAGAAAAGCTATAGTGCCTTCTCCTCTGTACAAGGATAGCTTCTaGGCCTTCAAGCCATATTTC +
Preference number: 4 (lower is better)
Translates to: LWVLALRSFRKAIVPSPLYKDSF*AFKPYF
Trigger: GAAATATGGCTTGAAGGCCCAGAAGCTATCCTTGTA...CAGAGGAGAAGGCACTATAGCTTTTCTAAAGGATCTGAGTGCCAAGACCCACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422503.6
ENST00000432242.5
CDS-3UTR CCA 90 bp AAGACACATCTGAAGAATCGTGGTCATAAACCTGGCTTCCTTCTCGCGTCACCTACTCATTCTCCGGTTTaGCTTTTATATCCACAACCC +
Preference number: 4 (lower is better)
Translates to: KTHLKNRGHKPGFLLASPTHSPV*LLYPQP
Trigger: GGGTTGTGGATATAAAAGCCAAACCGGAGAATGAGT...AGGTGACGCGAGAAGGAAGCCAGGTTTATGACCACGATTCTTCAGATGTGTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
CDS-3UTR CCA 90 bp CTGAAGACACATCTGAAGAATCGTGGTCATAAACCTGGCTTCCTTCTCGCGTCACACTCAGGGTGTTTGTaGAGCTTCCAATCTTTATGT +
Preference number: 4 (lower is better)
Translates to: LKTHLKNRGHKPGFLLASHSGCL*SFQSLC
Trigger: ACATAAAGATTGGAAGCTCCACAAACACCCTGAGTG...TGACGCGAGAAGGAAGCCAGGTTTATGACCACGATTCTTCAGATGTGTCTTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
ENST00000495571.5
CDS-3UTR CCA 90 bp TTGTCATCCAGCCACTCCTCAGCCAGCAAGATGCTCATTTCTTTGTCACTTAGATATAACTGTTTCAGGTaGCTGATCAGGTCTCCCATC +
Preference number: 4 (lower is better)
Translates to: LSSSHSSASKMLISLSLRYNCFR*LIRSPI
Trigger: GATGGGAGACCTGATCAGCCACCTGAAACAGTTATA...TCTAAGTGACAAAGAAATGAGCATCTTGCTGGCTGAGGAGTGGCTGGATGACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000448638.5
ENST00000489630.5
CDS-3UTR CCA 90 bp CAAGGACTCAGAATAAAGGTCTTGCATCTTCTCCAGATCACTGTGACCCTGTTCTATAACTGTTTCAGGTaGCTGATCAGGTCTCCCATC +
Preference number: 4 (lower is better)
Translates to: QGLRIKVLHLLQITVTLFYNCFR*LIRSPI
Trigger: GATGGGAGACCTGATCAGCCACCTGAAACAGTTATA...GAACAGGGTCACAGTGATCTGGAGAAGATGCAAGACCTTTATTCTGAGTCCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416277.5
ENST00000448638.5
CDS-3UTR CCA 90 bp TATAAAAATGGAACTCTCCTCCAGTCAAAGCAGCAACCTCTTTCAAAAACCTGTCTGAGGGAGGACATCTaGCTTCTGAGCAGGCTGGTT +
Preference number: 4 (lower is better)
Translates to: YKNGTLLQSKQQPLSKTCLREDI*LLSRLV
Trigger: AACCAGCCTGCTCAGAAGCCAGATGTCCTCCCTCAG...ACAGGTTTTTGAAAGAGGTTGCTGCTTTGACTGGAGGAGAGTTCCATTTTTATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
ENST00000495571.5
CDS-3UTR CCA 90 bp CTTTATGTCTCTAATCCAGGACTGAGCCTGTTCCAAATTATCTTCATTGACTTCTCCGGCTGCTGGCATTaGAGAGGCCATCCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: LYVSNPGLSLFQIIFIDFSGCWH*RGHPSF
Trigger: AAAGGAAGGATGGCCTCTCCAATGCCAGCAGCCGGA...GAAGTCAATGAAGATAATTTGGAACAGGCTCAGTCCTGGATTAGAGACATAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
CDS-3UTR CCA 90 bp CTTTATCAGCAAAAGCAGTTTTCAGGGCACTCAGGGTGTTTGTGGAGCTTCCAACTGTCTTCAGCTGTATaGAATGAAGGAAACAGCTCC +
Preference number: 4 (lower is better)
Translates to: LYQQKQFSGHSGCLWSFQLSSAV*NEGNSS
Trigger: GGAGCTGTTTCCTTCATTCCATACAGCTGAAGACAG...TTGGAAGCTCCACAAACACCCTGAGTGCCCTGAAAACTGCTTTTGCTGATAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422503.6
ENST00000432242.5
CDS-3UTR CCA 90 bp GAATGCAGGAAATTCTACACACTCTGTTCTCTCGGCAAATGCGTGGAATCTGCTCTGTCTTCAGCTGTATaGAATGAAGGAAACAGCTCC +
Preference number: 4 (lower is better)
Translates to: ECRKFYTLCSLGKCVESALSSAV*NEGNSS
Trigger: GGAGCTGTTTCCTTCATTCCATACAGCTGAAGACAG...AGCAGATTCCACGCATTTGCCGAGAGAACAGAGTGTGTAGAATTTCCTGCATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422503.6
ENST00000432242.5
CDS-3UTR CCA 90 bp AGAGTTTTTATTCTGGTTTCGGGCTCAATTAGAGTTACCTACAACAGACTCCGCAGCCTGGAAGGACGCTaGTCTCTTAAACATAGCTGC +
Preference number: 4 (lower is better)
Translates to: RVFILVSGSIRVTYNRLRSLEGR*SLKHSC
Trigger: GCAGCTATGTTTAAGAGACCAGCGTCCTTCCAGGCT...GCGGAGTCTGTTGTAGGTAACTCTAATTGAGCCCGAAACCAGAATAAAAACTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000495571.5
ENST00000614454.1
3UTR CAA 72 bp GTGGCTGATCAGGTCTCCCATCGGTCAGAAGGTAGATaGCCTGTGTTTCTTTATCAGCAAAAGCAGTTTTCA +
Preference number: 4 (lower is better)
Translates to: VADQVSHRSEGR*PVFLYQQKQFS
Trigger: TGAAAACTGCTTTTGCTGATAAAGAAACACAGGCAATCTACCTTCTGACCGATGGGAGACCTGATCAGCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416277.5
ENST00000448638.5
3UTR CAA 72 bp CTCCAGCTCCTGGAGGGAGTTTTCCTTTCAGTTTCCTaGAATTCCAAGTCATCACATTGTCACCATCCTTTG +
Preference number: 4 (lower is better)
Translates to: LQLLEGVFLSVS*NSKSSHCHHPL
Trigger: CAAAGGATGGTGACAATGTGATGACTTGGAATTCAAGGAAACTGAAAGGAAAACTCCCTCCAGGAGCTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422503.6
ENST00000432242.5
3UTR CAA 72 bp GCTGCTGATCAGGTCTCCCATCGGTCAGAAGGTAGATaGCCTGTGTTTCTTTATCAGCAAAAGCAGTTTTCA +
Preference number: 4 (lower is better)
Translates to: AADQVSHRSEGR*PVFLYQQKQFS
Trigger: TGAAAACTGCTTTTGCTGATAAAGAAACACAGGCAATCTACCTTCTGACCGATGGGAGACCTGATCAGCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422503.6
CDS-3UTR TCA 90 bp CTTTATCAGCAAAAGCAGTTTTCAGGGCACTCAGGGTGTTTGTGGAGCTTCCAAATTTCTCAGATGAAATaGGACTCTGCTCAGCCAAGT +
Preference number: 4 (lower is better)
Translates to: LYQQKQFSGHSGCLWSFQISQMK*DSAQPS
Trigger: ACTTGGCTGAGCAGAGTCTCATTTCATCTGAGAAAT...TTGGAAGCTCCACAAACACCCTGAGTGCCCTGAAAACTGCTTTTGCTGATAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000422503.6
ENST00000432242.5
ENST00000448638.5
CDS-3UTR TCA 90 bp ACACATCTGAAGAATCGTGGTCATAAACCTGGCTTCCTTCTCGCGTCACCTTTTTGGGAATCCGATCTGTaGCAAAATCTGTTTCAAGGT +
Preference number: 4 (lower is better)
Translates to: THLKNRGHKPGFLLASPFWESDL*QNLFQG
Trigger: ACCTTGAAACAGATTTTGTCACAGATCGGATTCCCA...AAAAGGTGACGCGAGAAGGAAGCCAGGTTTATGACCACGATTCTTCAGATGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
CDS-3UTR TCA 90 bp GTGAGACGTGTCAATGAGAATGTAGATGCAATCATTATGCAATCTTCCAAAGAGTTGAACTCGGTTATGTaGGCCACCTGCTCCTGGAGA +
Preference number: 4 (lower is better)
Translates to: VRRVNENVDAIIMQSSKELNSVM*ATCSWR
Trigger: TCTCCAGGAGCAGGTGGCTCACATAACCGAGTTCAA...CTCTTTGGAAGATTGCATAATGATTGCATCTACATTCTCATTGACACGTCTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
CDS-3UTR TCA 90 bp GATCAGGTCTCCCATCGGTCAGAAGGTAGATTGCCTGTGTTTCTTTATCAGCAATCTCTAATCCAGGACTaGGCCTGTTCCAAATTATCT +
Preference number: 4 (lower is better)
Translates to: DQVSHRSEGRLPVFLYQQSLIQD*ACSKLS
Trigger: AGATAATTTGGAACAGGCTCAGTCCTGGATTAGAGA...TTGCTGATAAAGAAACACAGGCAATCTACCTTCTGACCGATGGGAGACCTGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000422503.6
ENST00000432242.5
ENST00000448638.5
CDS-3UTR TCA 90 bp TTGTCATCCAGCCACTCCTCAGCCAGCAAGATGCTCATTTCTTTGTCACTTAGATCTCTAATCCAGGACTaGGCCTGTTCCAAATTATCT +
Preference number: 4 (lower is better)
Translates to: LSSSHSSASKMLISLSLRSLIQD*ACSKLS
Trigger: AGATAATTTGGAACAGGCTCAGTCCTGGATTAGAGA...TCTAAGTGACAAAGAAATGAGCATCTTGCTGGCTGAGGAGTGGCTGGATGACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
ENST00000495571.5
CDS-3UTR TCA 90 bp CAAGGACTCAGAATAAAGGTCTTGCATCTTCTCCAGATCACTGTGACCCTGTTCTGTACCACCAGTCCATaGTCAAGGACTCAGAATAAA +
Preference number: 4 (lower is better)
Translates to: QGLRIKVLHLLQITVTLFCTTSP*SRTQNK
Trigger: TTTATTCTGAGTCCTTGATCATGGACTGGTGGTACA...GAACAGGGTCACAGTGATCTGGAGAAGATGCAAGACCTTTATTCTGAGTCCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000433678.5
ENST00000448638.5
ENST00000495571.5
CDS-3UTR TCA 90 bp GATCAGGTCTCCCATCGGTCAGAAGGTAGATTGCCTGTGTTTCTTTATCAGCAAGAATCGACATCAGATTaGGGCTTTGCACACTTTTCT +
Preference number: 4 (lower is better)
Translates to: DQVSHRSEGRLPVFLYQQESTSD*GFAHFS
Trigger: AGAAAAGTGTGCAAAGCCTCAATCTGATGTCGATTC...TTGCTGATAAAGAAACACAGGCAATCTACCTTCTGACCGATGGGAGACCTGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
CDS-3UTR TCA 90 bp AAAACAAGATTGCGGGCTTGGATCCTGACTATGCTGACTGCTAAACAATTTGAATCGCGTCACCTTTTCTaGCGATTTGTCATCCAGCCA +
Preference number: 4 (lower is better)
Translates to: KTRLRAWILTMLTAKQFESRHLF*RFVIQP
Trigger: TGGCTGGATGACAAATCGTCAGAAAAGGTGACGCGA...TTCAAATTGTTTAGCAGTCAGCATAGTCAGGATCCAAGCCCGCAATCTTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR TCA 90 bp GGATTGAATTGCCTGTTCCACTTTTCGCTTGTAGATATTGAGTTTGGCTCCTTGTTCGCTTGTAGATATTaGGTTTGGCTCCTTGGGGGT +
Preference number: 4 (lower is better)
Translates to: GLNCLFHFSLVDIEFGSLFACRY*VWLLGG
Trigger: ACCCCCAAGGAGCCAAACTCAATATCTACAAGCGAA...CAAGGAGCCAAACTCAATATCTACAAGCGAAAAGTGGAACAGGCAATTCAATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR TCA 90 bp CTCATGCTGTCTTCAGCTGTATGGAATGAAGGAAACAGCTCCAGAGCGAGAGACTTTTCTTTTTCCTCTTaGGATAATGCTCGCCAAACA +
Preference number: 4 (lower is better)
Translates to: LMLSSAVWNEGNSSRARDFSFSS*DNARQT
Trigger: TGTTTGGCGAGCATTATCTCAAGAGGAAAAAGAAAA...GTCTCTCGCTCTGGAGCTGTTTCCTTCATTCCATACAGCTGAAGACAGCATGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000495571.5
CDS-3UTR TCA 90 bp ATGAAAATGTCAGGAAACTATACAGTAGGGGATGTTCAGTCTTGCAGATCTCAGTCTGTGGCTCAGAACTaGTACTCCCTCCTTAAACGG +
Preference number: 4 (lower is better)
Translates to: MKMSGNYTVGDVQSCRSQSVAQN*YSLLKR
Trigger: CCGTTTAAGGAGGGAGTATCAGTTCTGAGCCACAGA...CTGAGATCTGCAAGACTGAACATCCCCTACTGTATAGTTTCCTGACATTTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432242.5
CDS-3UTR TCA 90 bp AAAACAAGATTGCGGGCTTGGATCCTGACTATGCTGACTGCTAAACAATTTGAAGGGGGTGACTTTATATaGGAGCAAGAGAGCGCATAC +
Preference number: 4 (lower is better)
Translates to: KTRLRAWILTMLTAKQFEGGDFI*EQESAY
Trigger: GTATGCGCTCTCTTGCTCTCATATAAAGTCACCCCC...TTCAAATTGTTTAGCAGTCAGCATAGTCAGGATCCAAGCCCGCAATCTTGTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR TCA 90 bp TTAGAGTCCCAGGTGTCTTCTGGATTCGATGCAATCTCAACAGAGGTTGTTTCTCTCAGGAATTGGGGGTaGCTTTATATGAGAGCAAGA +
Preference number: 4 (lower is better)
Translates to: LESQVSSGFDAISTEVVSLRNWG*LYMRAR
Trigger: TCTTGCTCTCATATAAAGTCACCCCCAATTCCTGAG...AGAAACAACCTCTGTTGAGATTGCATCGAATCCAGAAGACACCTGGGACTCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432242.5
CDS-3UTR TCA 90 bp AATGTAAGAGTTTTTATTCTGGTTTCGGGCTCAATTAGAGTTACCTACAACAGAGTCAACGCTGAGGTCTaGACAGCCTGGAAGGACGCT +
Preference number: 4 (lower is better)
Translates to: NVRVFILVSGSIRVTYNRVNAEV*TAWKDA
Trigger: AGCGTCCTTCCAGGCTGTTCAGACCTCAGCGTTGAC...TCTGTTGTAGGTAACTCTAATTGAGCCCGAAACCAGAATAAAAACTCTTACATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
ENST00000495571.5
ENST00000614454.1
CDS-3UTR GCA 90 bp CCACCAGTCCATGATCAAGGACTCAGAATAAAGGTCTTGCATCTTCTCCAGATCGATGAAATGAGACTCTaGTCAGCCAAGTCTGTTTTG +
Preference number: 4 (lower is better)
Translates to: PPVHDQGLRIKVLHLLQIDEMRL*SAKSVL
Trigger: CAAAACAGACTTGGCTGAGCAGAGTCTCATTTCATC...GATCTGGAGAAGATGCAAGACCTTTATTCTGAGTCCTTGATCATGGACTGGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000433678.5
ENST00000448638.5
CDS-3UTR GCA 90 bp TTCCTGTATGAACTGAATGATCTTGTCCTTCACCAAGTCCAGTTTGCTCTTCATATGACACCAAAAATCTaGCGGCTCTTGCTGGTGAGC +
Preference number: 4 (lower is better)
Translates to: FLYELNDLVLHQVQFALHMTPKI*RLLLVS
Trigger: GCTCACCAGCAAGAGCCGGCAGATTTTTGGTGTCAT...ATGAAGAGCAAACTGGACTTGGTGAAGGACAAGATCATTCAGTTCATACAGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
CDS-3UTR GCA 90 bp ATGAAAATGTCAGGAAACTATACAGTAGGGGATGTTCAGTCTTGCAGATCTCAGTGTTCTCTCGGCAAATaGGTGGAATCTGCTGTGGGT +
Preference number: 4 (lower is better)
Translates to: MKMSGNYTVGDVQSCRSQCSLGK*VESAVG
Trigger: ACCCACAGCAGATTCCACGCATTTGCCGAGAGAACA...CTGAGATCTGCAAGACTGAACATCCCCTACTGTATAGTTTCCTGACATTTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000477737.6
CDS-3UTR GCA 90 bp CAAGGACTCAGAATAAAGGTCTTGCATCTTCTCCAGATCACTGTGACCCTGTTCTTCAAGCCATATTTCTaGAGCCATGTCTTAGAGTCC +
Preference number: 4 (lower is better)
Translates to: QGLRIKVLHLLQITVTLFFKPYF*SHVLES
Trigger: GGACTCTAAGACATGGCTGCAGAAATATGGCTTGAA...GAACAGGGTCACAGTGATCTGGAGAAGATGCAAGACCTTTATTCTGAGTCCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000433678.5
ENST00000448638.5
CDS-3UTR GCA 90 bp CTTCAAGCCATATTTCTGCAGCCATGTCTTAGAGTCCCAGGTGTCTTCTGGATTGAGCATGGACAAACCTaGTGCAATATTTTGCATGGA +
Preference number: 4 (lower is better)
Translates to: LQAIFLQPCLRVPGVFWIEHGQT*CNILHG
Trigger: TCCATGCAAAATATTGCAGCAGGTTTGTCCATGCTC...AATCCAGAAGACACCTGGGACTCTAAGACATGGCTGCAGAAATATGGCTTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422503.6
CDS-3UTR GCA 90 bp TCAAGGACTCAGAATAAAGGTCTTGCATCTTCTCCAGATCACTGTGACCCTGTTTCACCAAGTCCAGTTTaGTCTTCATTGAGTGAGACG +
Preference number: 4 (lower is better)
Translates to: SRTQNKGLASSPDHCDPVSPSPV*SSLSET
Trigger: CGTCTCACTCAATGAAGAGCAAACTGGACTTGGTGA...AACAGGGTCACAGTGATCTGGAGAAGATGCAAGACCTTTATTCTGAGTCCTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000433678.5
ENST00000448638.5
CDS-3UTR GCA 90 bp CCACCAGTCCATGATCAAGGACTCAGAATAAAGGTCTTGCATCTTCTCCAGATCGGTCAGAAGGTAGATTaGCTGTGTTTCTTTATCAGC +
Preference number: 4 (lower is better)
Translates to: PPVHDQGLRIKVLHLLQIGQKVD*LCFFIS
Trigger: GCTGATAAAGAAACACAGGCAATCTACCTTCTGACC...GATCTGGAGAAGATGCAAGACCTTTATTCTGAGTCCTTGATCATGGACTGGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000433678.5
ENST00000448638.5
ENST00000495571.5
CDS-3UTR GCA 90 bp TCATCACATCTTGCAATAACCTTCTGTCCTTTGAGGGGATCTGGTCTTTTTGATACCTTAGACACGACATaGTTGTCCAGGACGGGAACA +
Preference number: 4 (lower is better)
Translates to: SSHLAITFCPLRGSGLFDTLDTT*LSRTGT
Trigger: TGTTCCCGTCCTGGACAAGCATGTCGTGTCTAAGGT...ATCAAAAAGACCAGATCCCCTCAAAGGACAGAAGGTTATTGCAAGATGTGATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR GCA 90 bp GAAAGGCCCCATGGTCCCTTCAACATATTCAGAGATGAAGTTTGTGTTGAATCGTCTTATTTGTGTCGTTaGACACATGTGCCAGAGGGA +
Preference number: 4 (lower is better)
Translates to: ERPHGPFNIFRDEVCVESSYLCR*THVPEG
Trigger: TCCCTCTGGCACATGTGTGCAACGACACAAATAAGA...CGATTCAACACAAACTTCATCTCTGAATATGTTGAAGGGACCATGGGGCCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR GCA 90 bp ATTTTCCCAGCTAGGATTTCACTTTCCAGCATCGACAGCTCTTTCAGTGAAATGTGGAGTTCCATGGCCTaGTGGATGTACATTTTCCCA +
Preference number: 4 (lower is better)
Translates to: IFPARISLSSIDSSFSEMWSSMA*WMYIFP
Trigger: TGGGAAAATGTACATCCAGCAGGCCATGGAACTCCA...CATTTCACTGAAAGAGCTGTCGATGCTGGAAAGTGAAATCCTAGCTGGGAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR CCA 90 bp ATAAAAATGGAACTCTCCTCCAGTCAAAGCAGCAACCTCTTTCAAAAACCTGTTATCTCCAAGGCCCTCTaGAGGAGAAGCTCCTTGGAT +
Preference number: 4 (lower is better)
Translates to: IKMELSSSQSSNLFQKPVISKAL*RRSSLD
Trigger: ATCCAAGGAGCTTCTCCTCCAGAGGGCCTTGGAGAT...AACAGGTTTTTGAAAGAGGTTGCTGCTTTGACTGGAGGAGAGTTCCATTTTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000433678.5
CDS-3UTR CCA 90 bp GAGAATGTAGATGCAATCATTATGCAATCTTCCAAAGAGGCTTTGACTCCCATCTCTGACTCCAGCTCCTaGAGGGAGTTTTCCTTTCAG +
Preference number: 4 (lower is better)
Translates to: ENVDAIIMQSSKEALTPISDSSS*REFSFQ
Trigger: CTGAAAGGAAAACTCCCTCCAGGAGCTGGAGTCAGA...GATGGGAGTCAAAGCCTCTTTGGAAGATTGCATAATGATTGCATCTACATTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000422503.6
ENST00000432242.5
CDS-3UTR CCA 90 bp CGTTTGACCTGGTCTATAACTGTTTCAGGTGGAATGATACACATGACAGTCTCTTCCTTCCAGGGAGCATaGACAAACCTGCTGCAATAT +
Preference number: 4 (lower is better)
Translates to: RLTWSITVSGGMIHMTVSSFQGA*TNLLQY
Trigger: ATATTGCAGCAGGTTTGTCCATGCTCCCTGGAAGGA...AGAGACTGTCATGTGTATCATTCCACCTGAAACAGTTATAGACCAGGTCAAACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433678.5
CDS-3UTR CCA 90 bp TGGAGTTCCATGGCCTGCTGGATGTACATTTTCCCAGCTAGGATTTCACTTTCCTTGAGTTTGGCTCCTTaGGGGTTAATTAATGTCATC +
Preference number: 4 (lower is better)
Translates to: WSSMACWMYIFPARISLSLSLAP*GLINVI
Trigger: GATGACATTAATTAACCCCCAAGGAGCCAAACTCAA...GGAAAGTGAAATCCTAGCTGGGAAAATGTACATCCAGCAGGCCATGGAACTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR CCA 90 bp AGAATAAAGGTCTTGCATCTTCTCCAGATCACTGTGACCCTGTTCCATTTCCTTAGTTCCATGGCCTGCTaGATGTACATTTTCCCAGCT +
Preference number: 4 (lower is better)
Translates to: RIKVLHLLQITVTLFHFLSSMAC*MYIFPA
Trigger: AGCTGGGAAAATGTACATCCAGCAGGCCATGGAACT...AAGGAAATGGAACAGGGTCACAGTGATCTGGAGAAGATGCAAGACCTTTATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000495571.5
CDS-3UTR CCA 90 bp AACTATACAGTAGGGGATGTTCAGTCTTGCAGATCTCAGACAAGTTACCGAGTCTTGCATAATTCTTCTTaGCAGCCTCCTGGAGTTCCA +
Preference number: 4 (lower is better)
Translates to: NYTVGDVQSCRSQTSYRVLHNSS*QPPGVP
Trigger: TGGAACTCCAGGAGGCTGCCAAGAAGAATTATGCAA...GACTCGGTAACTTGTCTGAGATCTGCAAGACTGAACATCCCCTACTGTATAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CCA 90 bp CCCATGGTCCCTTCAACATATTCAGAGATGAAGTTTGTGTTGAATCGACATCAGCCATTTAATCCGCACTaGTCTGCACGGACTCATTCT +
Preference number: 4 (lower is better)
Translates to: PMVPSTYSEMKFVLNRHQPFNPH*SARTHS
Trigger: AGAATGAGTCCGTGCAGACCAGTGCGGATTAAATGG...CTGATGTCGATTCAACACAAACTTCATCTCTGAATATGTTGAAGGGACCATGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
CDS-3UTR CCA 90 bp ATTTTCCCAGCTAGGATTTCACTTTCCAGCATCGACAGCTCTTTCAGTGAAATGCCATTTAATCCGCACTaGTCTGCACGGACTCATTCT +
Preference number: 4 (lower is better)
Translates to: IFPARISLSSIDSSFSEMPFNPH*SARTHS
Trigger: AGAATGAGTCCGTGCAGACCAGTGCGGATTAAATGG...CATTTCACTGAAAGAGCTGTCGATGCTGGAAAGTGAAATCCTAGCTGGGAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432242.5
CDS-3UTR CCA 90 bp ATTTCTGTTGCTCTCCCGGGGCCTTGTTTGCATAATTCTTCTTGGCAGCCTCCTTGTAGAATTTTTCTGTaGCCACATGCTTATTGGGAA +
Preference number: 4 (lower is better)
Translates to: ISVALPGPCLHNSSWQPPCRIFL*PHAYWE
Trigger: TTCCCAATAAGCATGTGGCCACAGAAAAATTCTACA...AGGAGGCTGCCAAGAAGAATTATGCAAACAAGGCCCCGGGAGAGCAACAGAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
3UTR CAA 72 bp CCTTGGGGGTTAATTAATGTCATCTTATTTGTGTCGTaGCACACATGTGCCAGAGGGAACACCTCATCAAAG +
Preference number: 4 (lower is better)
Translates to: PWGLINVILFVS*HTCARGNTSSK
Trigger: CTTTGATGAGGTGTTCCCTCTGGCACATGTGTGCAACGACACAAATAAGATGACATTAATTAACCCCCAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR TCA 90 bp AACTATACAGTAGGGGATGTTCAGTCTTGCAGATCTCAGACAAGTTACCGAGTCTTAAGCCCATGCAGTTaGAGCCATTTCTCAGATGAA +
Preference number: 4 (lower is better)
Translates to: NYTVGDVQSCRSQTSYRVLSPCS*SHFSDE
Trigger: TTCATCTGAGAAATGGCTTCAACTGCATGGGCTTAA...GACTCGGTAACTTGTCTGAGATCTGCAAGACTGAACATCCCCTACTGTATAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000477737.6
CDS-3UTR TCA 90 bp GGATGTTCAGTCTTGCAGATCTCAGACAAGTTACCGAGTCTGAATTTCAGTCCTTGGGAATCCGATCTGTaGCAAAATCTGTTTCAAGGT +
Preference number: 4 (lower is better)
Translates to: GCSVLQISDKLPSLNFSPWESDL*QNLFQG
Trigger: ACCTTGAAACAGATTTTGTCACAGATCGGATTCCCA...AGGACTGAAATTCAGACTCGGTAACTTGTCTGAGATCTGCAAGACTGAACATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000477737.6
CDS-3UTR TCA 90 bp AGAATAAAGGTCTTGCATCTTCTCCAGATCACTGTGACCCTGTTCCATTTCCTTCACTTCACAGGCTCTTaGGAAACCCGTATGATATTG +
Preference number: 4 (lower is better)
Translates to: RIKVLHLLQITVTLFHFLHFTGS*ETRMIL
Trigger: CAATATCATACGGGTTTCTCAAGAGCCTGTGAAGTG...AAGGAAATGGAACAGGGTCACAGTGATCTGGAGAAGATGCAAGACCTTTATTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000433678.5
ENST00000448638.5
CDS-3UTR TCA 90 bp CTTTATGTCTCTAATCCAGGACTGAGCCTGTTCCAAATTATCTTCATTGACTTCCTTCCAAAGAGGCTTTaGCTCCCATCCTGTAGCCAT +
Preference number: 4 (lower is better)
Translates to: LYVSNPGLSLFQIIFIDFLPKRL*LPSCSH
Trigger: ATGGCTACAGGATGGGAGTCAAAGCCTCTTTGGAAG...GAAGTCAATGAAGATAATTTGGAACAGGCTCAGTCCTGGATTAGAGACATAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000422503.6
ENST00000432242.5
ENST00000448638.5
CDS-3UTR TCA 90 bp TTGTCATCCAGCCACTCCTCAGCCAGCAAGATGCTCATTTCTTTGTCACTTAGAAGTGAGACGTGTCAATaGGAATGTAGATGCAATCAT +
Preference number: 4 (lower is better)
Translates to: LSSSHSSASKMLISLSLRSETCQ*ECRCNH
Trigger: ATGATTGCATCTACATTCTCATTGACACGTCTCACT...TCTAAGTGACAAAGAAATGAGCATCTTGCTGGCTGAGGAGTGGCTGGATGACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
CDS-3UTR TCA 90 bp AGGCCCCATGGTCCCTTCAACATATTCAGAGATGAAGTTTGTGTTGAATCGACATTGCTCTTCATTGAGTaGGACGTGTCAATGAGAATG +
Preference number: 4 (lower is better)
Translates to: RPHGPFNIFRDEVCVESTLLFIE*DVSMRM
Trigger: CATTCTCATTGACACGTCTCACTCAATGAAGAGCAA...TGTCGATTCAACACAAACTTCATCTCTGAATATGTTGAAGGGACCATGGGGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
CDS-3UTR TCA 90 bp ATGGAACTCTCCTCCAGTCAAAGCAGCAACCTCTTTCAAAAACCTGTTTGCAATCAGTTTGCTCTTCATTaGGTGAGACGTGTCAATGAG +
Preference number: 4 (lower is better)
Translates to: MELSSSQSSNLFQKPVCNQFALH*VRRVNE
Trigger: CTCATTGACACGTCTCACTCAATGAAGAGCAAACTG...ATTGCAAACAGGTTTTTGAAAGAGGTTGCTGCTTTGACTGGAGGAGAGTTCCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000433678.5
ENST00000448638.5
CDS-3UTR TCA 90 bp AACTATACAGTAGGGGATGTTCAGTCTTGCAGATCTCAGACAAGTTACCGAGTCTGTTCCTGTATGAACTaGATGATCTTGTCCTTCACC +
Preference number: 4 (lower is better)
Translates to: NYTVGDVQSCRSQTSYRVCSCMN*MILSFT
Trigger: GGTGAAGGACAAGATCATTCAGTTCATACAGGAACA...GACTCGGTAACTTGTCTGAGATCTGCAAGACTGAACATCCCCTACTGTATAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000477737.6
CDS-3UTR TCA 90 bp TTCCTGTATGAACTGAATGATCTTGTCCTTCACCAAGTCCAGTTTGCTCTTCATCGCCAAGCAACTGCTTaGCCATCAAACTTCACAAAG +
Preference number: 4 (lower is better)
Translates to: FLYELNDLVLHQVQFALHRQATA*PSNFTK
Trigger: CTTTGTGAAGTTTGATGGTCAAGCAGTTGCTTGGCG...ATGAAGAGCAAACTGGACTTGGTGAAGGACAAGATCATTCAGTTCATACAGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000422503.6
ENST00000432242.5
ENST00000448638.5
CDS-3UTR TCA 90 bp GAGAATGTAGATGCAATCATTATGCAATCTTCCAAAGAGGCTTTGACTCCCATCCGCCAAGCAACTGCTTaGCCATCAAACTTCACAAAG +
Preference number: 4 (lower is better)
Translates to: ENVDAIIMQSSKEALTPIRQATA*PSNFTK
Trigger: CTTTGTGAAGTTTGATGGTCAAGCAGTTGCTTGGCG...GATGGGAGTCAAAGCCTCTTTGGAAGATTGCATAATGATTGCATCTACATTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000422503.6
ENST00000432242.5
ENST00000448638.5
CDS-3UTR TCA 90 bp CAAGGACTCAGAATAAAGGTCTTGCATCTTCTCCAGATCACTGTGACCCTGTTCCCAAATTATCTTCATTaGCTTCAGCAAGTTGTTCCC +
Preference number: 4 (lower is better)
Translates to: QGLRIKVLHLLQITVTLFPNYLH*LQQVVP
Trigger: GGGAACAACTTGCTGAAGTCAATGAAGATAATTTGG...GAACAGGGTCACAGTGATCTGGAGAAGATGCAAGACCTTTATTCTGAGTCCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000433678.5
ENST00000448638.5
ENST00000495571.5
CDS-3UTR TCA 90 bp GATCAAGGACTCAGAATAAAGGTCTTGCATCTTCTCCAGATCACTGTGACCCTGCCAAATTATCTTCATTaGCTTCAGCAAGTTGTTCCC +
Preference number: 4 (lower is better)
Translates to: DQGLRIKVLHLLQITVTLPNYLH*LQQVVP
Trigger: GGGAACAACTTGCTGAAGTCAATGAAGATAATTTGG...CAGGGTCACAGTGATCTGGAGAAGATGCAAGACCTTTATTCTGAGTCCTTGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000433678.5
ENST00000448638.5
ENST00000495571.5
CDS-3UTR TCA 90 bp AGATGCAATCATTATGCAATCTTCCAAAGAGGCTTTGACTCCCATCCTGTAGCCTCTCTAATCCAGGACTaGGCCTGTTCCAAATTATCT +
Preference number: 4 (lower is better)
Translates to: RCNHYAIFQRGFDSHPVASLIQD*ACSKLS
Trigger: AGATAATTTGGAACAGGCTCAGTCCTGGATTAGAGA...GGCTACAGGATGGGAGTCAAAGCCTCTTTGGAAGATTGCATAATGATTGCATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000422503.6
ENST00000432242.5
ENST00000448638.5
CDS-3UTR TCA 90 bp ATGGAACTCTCCTCCAGTCAAAGCAGCAACCTCTTTCAAAAACCTGTTTGCAATGAACAGATTTCCTTTTaGTGCTTGCTGTCTCCATCC +
Preference number: 4 (lower is better)
Translates to: MELSSSQSSNLFQKPVCNEQISF*CLLSPS
Trigger: GGATGGAGACAGCAAGCATCAAAAGGAAATCTGTTC...ATTGCAAACAGGTTTTTGAAAGAGGTTGCTGCTTTGACTGGAGGAGAGTTCCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
ENST00000495571.5
CDS-3UTR TCA 90 bp TATTCAAGCGCTTTTCATAGGATTGAATTGCCTGTTCCACTTTTCGCTTGTAGATCGCGTCACCTTTTCTaGCGATTTGTCATCCAGCCA +
Preference number: 4 (lower is better)
Translates to: YSSAFHRIELPVPLFACRSRHLF*RFVIQP
Trigger: TGGCTGGATGACAAATCGTCAGAAAAGGTGACGCGA...TCTACAAGCGAAAAGTGGAACAGGCAATTCAATCCTATGAAAAGCGCTTGAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR TCA 90 bp TTAATTAATGTCATCTTATTTGTGTCGTTGCACACATGTGCCAGAGGGAACACCTTCAGCTGTATGGAATaGAGGAAACAGCTCCAGAGC +
Preference number: 4 (lower is better)
Translates to: LINVILFVSLHTCARGNTFSCME*RKQLQS
Trigger: GCTCTGGAGCTGTTTCCTTCATTCCATACAGCTGAA...GGTGTTCCCTCTGGCACATGTGTGCAACGACACAAATAAGATGACATTAATTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000495571.5
CDS-3UTR TCA 90 bp CTTTGTTGGATTTCCTTGCAATTTCTGTTGCTCTCCCGGGGCCTTGTTTGCATATGTTTGCATCTAACCTaGTTCAGAATGCTGATGAGA +
Preference number: 4 (lower is better)
Translates to: LCWISLQFLLLSRGLVCICLHLT*FRMLMR
Trigger: TCTCATCAGCATTCTGAATCAGGTTAGATGCAAACA...TATGCAAACAAGGCCCCGGGAGAGCAACAGAAATTGCAAGGAAATCCAACAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432242.5
CDS-3UTR TCA 90 bp AAGACACATCTGAAGAATCGTGGTCATAAACCTGGCTTCCTTCTCGCGTCACCTACAAGTTACCGAGTCTaGATTTCAGTCCTAATATTG +
Preference number: 4 (lower is better)
Translates to: KTHLKNRGHKPGFLLASPTSYRV*ISVLIL
Trigger: CAATATTAGGACTGAAATTCAGACTCGGTAACTTGT...AGGTGACGCGAGAAGGAAGCCAGGTTTATGACCACGATTCTTCAGATGTGTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000489630.5
CDS-3UTR GCA 90 bp TATAAAAATGGAACTCTCCTCCAGTCAAAGCAGCAACCTCTTTCAAAAACCTGTTGCCTCTGCAGCTGCTaGTCAGAGATGGTAGAAGAT +
Preference number: 4 (lower is better)
Translates to: YKNGTLLQSKQQPLSKTCCLCSC*SEMVED
Trigger: ATCTTCTACCATCTCTGAGCAGCAGCTGCAGAGGCA...ACAGGTTTTTGAAAGAGGTTGCTGCTTTGACTGGAGGAGAGTTCCATTTTTATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000433678.5
ENST00000448638.5
CDS-3UTR GCA 90 bp CTTTATGTCTCTAATCCAGGACTGAGCCTGTTCCAAATTATCTTCATTGACTTCTCTTGCCTCTGCAGCTaGTGCTCAGAGATGGTAGAA +
Preference number: 4 (lower is better)
Translates to: LYVSNPGLSLFQIIFIDFSCLCS*CSEMVE
Trigger: TTCTACCATCTCTGAGCAGCAGCTGCAGAGGCAAGA...GAAGTCAATGAAGATAATTTGGAACAGGCTCAGTCCTGGATTAGAGACATAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000422503.6
ENST00000432242.5
ENST00000448638.5
CDS-3UTR GCA 90 bp CAAAATTATAAAAATGGAACTCTCCTCCAGTCAAAGCAGCAACCTCTTTCAAAACATCCCTCTTGCCTCTaGAGCTGCTGCTCAGAGATG +
Preference number: 4 (lower is better)
Translates to: QNYKNGTLLQSKQQPLSKHPSCL*SCCSEM
Trigger: CATCTCTGAGCAGCAGCTGCAGAGGCAAGAGGGATG...TTTTGAAAGAGGTTGCTGCTTTGACTGGAGGAGAGTTCCATTTTTATAATTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000433678.5
ENST00000448638.5
CDS-3UTR GCA 90 bp TATAAAAATGGAACTCTCCTCCAGTCAAAGCAGCAACCTCTTTCAAAAACCTGTTTAATCCATCCCTCTTaGCTCTGCAGCTGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: YKNGTLLQSKQQPLSKTCLIHPS*LCSCCS
Trigger: TGAGCAGCAGCTGCAGAGGCAAGAGGGATGGATTAA...ACAGGTTTTTGAAAGAGGTTGCTGCTTTGACTGGAGGAGAGTTCCATTTTTATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000433678.5
ENST00000448638.5
CDS-3UTR GCA 90 bp CTTTATGTCTCTAATCCAGGACTGAGCCTGTTCCAAATTATCTTCATTGACTTCTTAATCCATCCCTCTTaGCTCTGCAGCTGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: LYVSNPGLSLFQIIFIDFLIHPS*LCSCCS
Trigger: TGAGCAGCAGCTGCAGAGGCAAGAGGGATGGATTAA...GAAGTCAATGAAGATAATTTGGAACAGGCTCAGTCCTGGATTAGAGACATAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000422503.6
ENST00000432242.5
ENST00000448638.5
CDS-3UTR GCA 90 bp ATAAAAATGGAACTCTCCTCCAGTCAAAGCAGCAACCTCTTTCAAAAACCTGTTATGACACCAAAAATCTaGCGGCTCTTGCTGGTGAGC +
Preference number: 4 (lower is better)
Translates to: IKMELSSSQSSNLFQKPVMTPKI*RLLLVS
Trigger: GCTCACCAGCAAGAGCCGGCAGATTTTTGGTGTCAT...AACAGGTTTTTGAAAGAGGTTGCTGCTTTGACTGGAGGAGAGTTCCATTTTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000433678.5
ENST00000448638.5
CDS-3UTR GCA 90 bp TATAAAAATGGAACTCTCCTCCAGTCAAAGCAGCAACCTCTTTCAAAAACCTGTTGTTCTCTCGGCAAATaGGTGGAATCTGCTGTGGGT +
Preference number: 4 (lower is better)
Translates to: YKNGTLLQSKQQPLSKTCCSLGK*VESAVG
Trigger: ACCCACAGCAGATTCCACGCATTTGCCGAGAGAACA...ACAGGTTTTTGAAAGAGGTTGCTGCTTTGACTGGAGGAGAGTTCCATTTTTATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000433678.5
CDS-3UTR GCA 90 bp CTTTATGTCTCTAATCCAGGACTGAGCCTGTTCCAAATTATCTTCATTGACTTCGCTTCCTCCATCTCTTaGCAAACGAGAAACACGTCC +
Preference number: 4 (lower is better)
Translates to: LYVSNPGLSLFQIIFIDFASSIS*QTRNTS
Trigger: GGACGTGTTTCTCGTTTGGCAAGAGATGGAGGAAGC...GAAGTCAATGAAGATAATTTGGAACAGGCTCAGTCCTGGATTAGAGACATAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000422503.6
ENST00000432242.5
ENST00000448638.5
CDS-3UTR GCA 90 bp AGATTGCGGGCTTGGATCCTGACTATGCTGACTGCTAAACAATTTGAAAGTCCTTTCAAGCCATATTTCTaGAGCCATGTCTTAGAGTCC +
Preference number: 4 (lower is better)
Translates to: RLRAWILTMLTAKQFESPFKPYF*SHVLES
Trigger: GGACTCTAAGACATGGCTGCAGAAATATGGCTTGAA...AGGACTTTCAAATTGTTTAGCAGTCAGCATAGTCAGGATCCAAGCCCGCAATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000477737.6
CDS-3UTR GCA 90 bp TTAGAGTCCCAGGTGTCTTCTGGATTCGATGCAATCTCAACAGAGGTTGTTTCTCATGGACAAACCTGCTaGAATATTTTGCATGGACTG +
Preference number: 4 (lower is better)
Translates to: LESQVSSGFDAISTEVVSHGQTC*NILHGL
Trigger: CAGTCCATGCAAAATATTGCAGCAGGTTTGTCCATG...AGAAACAACCTCTGTTGAGATTGCATCGAATCCAGAAGACACCTGGGACTCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422503.6
CDS-3UTR GCA 90 bp AGATGCAATCATTATGCAATCTTCCAAAGAGGCTTTGACTCCCATCCTGTAGCCGGTCAGAAGGTAGATTaGCTGTGTTTCTTTATCAGC +
Preference number: 4 (lower is better)
Translates to: RCNHYAIFQRGFDSHPVAGQKVD*LCFFIS
Trigger: GCTGATAAAGAAACACAGGCAATCTACCTTCTGACC...GGCTACAGGATGGGAGTCAAAGCCTCTTTGGAAGATTGCATAATGATTGCATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000422503.6
ENST00000432242.5
ENST00000448638.5
CDS-3UTR GCA 90 bp CGTTTGACCTGGTCTATAACTGTTTCAGGTGGAATGATACACATGACAGTCTCTGTCTCCATCCTTTTCTaGATTGTACCACCAGTCCAT +
Preference number: 4 (lower is better)
Translates to: RLTWSITVSGGMIHMTVSVSILF*IVPPVH
Trigger: ATGGACTGGTGGTACAATGCAGAAAAGGATGGAGAC...AGAGACTGTCATGTGTATCATTCCACCTGAAACAGTTATAGACCAGGTCAAACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000433678.5
ENST00000495571.5
CDS-3UTR GCA 90 bp TTTGATCTGAAAGGCCCCATGGTCCCTTCAACATATTCAGAGATGAAGTTTGTGGTCTCCATCCTTTTCTaGATTGTACCACCAGTCCAT +
Preference number: 4 (lower is better)
Translates to: FDLKGPMVPSTYSEMKFVVSILF*IVPPVH
Trigger: ATGGACTGGTGGTACAATGCAGAAAAGGATGGAGAC...CACAAACTTCATCTCTGAATATGTTGAAGGGACCATGGGGCCTTTCAGATCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
ENST00000495571.5
CDS-3UTR GCA 90 bp GGATGTTCAGTCTTGCAGATCTCAGACAAGTTACCGAGTCTGAATTTCAGTCCTCCTCAGCCAGCAAGATaGTCATTTCTTTGTCACTTA +
Preference number: 4 (lower is better)
Translates to: GCSVLQISDKLPSLNFSPPQPAR*SFLCHL
Trigger: TAAGTGACAAAGAAATGAGCATCTTGCTGGCTGAGG...AGGACTGAAATTCAGACTCGGTAACTTGTCTGAGATCTGCAAGACTGAACATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR GCA 90 bp TATAAAAATGGAACTCTCCTCCAGTCAAAGCAGCAACCTCTTTCAAAAACCTGTACCTTAGACACGACATaGTTGTCCAGGACGGGAACA +
Preference number: 4 (lower is better)
Translates to: YKNGTLLQSKQQPLSKTCTLDTT*LSRTGT
Trigger: TGTTCCCGTCCTGGACAAGCATGTCGTGTCTAAGGT...ACAGGTTTTTGAAAGAGGTTGCTGCTTTGACTGGAGGAGAGTTCCATTTTTATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
ENST00000495571.5
CDS-3UTR GCA 90 bp AAACGTTTGACCTGGTCTATAACTGTTTCAGGTGGAATGATACACATGACAGTCAGTCTCTCCCACTCATaGTGTCTTCAGCTGTATGGA +
Preference number: 4 (lower is better)
Translates to: KRLTWSITVSGGMIHMTVSLSHS*CLQLYG
Trigger: TCCATACAGCTGAAGACAGCATGAGTGGGAGAGACT...GACTGTCATGTGTATCATTCCACCTGAAACAGTTATAGACCAGGTCAAACGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000433678.5
ENST00000495571.5
CDS-3UTR CCA 90 bp GAATGCAGGAAATTCTACACACTCTGTTCTCTCGGCAAATGCGTGGAATCTGCTTGTCACCATCCTTTGTaGAGAATGCAGGAAATTCTA +
Preference number: 4 (lower is better)
Translates to: ECRKFYTLCSLGKCVESACHHPL*RMQEIL
Trigger: TAGAATTTCCTGCATTCTCCACAAAGGATGGTGACA...AGCAGATTCCACGCATTTGCCGAGAGAACAGAGTGTGTAGAATTTCCTGCATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422503.6
ENST00000432242.5
CDS-3UTR CCA 90 bp ATGAAAATGTCAGGAAACTATACAGTAGGGGATGTTCAGTCTTGCAGATCTCAGGTCCCAGGTGTCTTCTaGATTCGATGCAATCTCAAC +
Preference number: 4 (lower is better)
Translates to: MKMSGNYTVGDVQSCRSQVPGVF*IRCNLN
Trigger: GTTGAGATTGCATCGAATCCAGAAGACACCTGGGAC...CTGAGATCTGCAAGACTGAACATCCCCTACTGTATAGTTTCCTGACATTTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000477737.6
CDS-3UTR CCA 90 bp TCAAGGACTCAGAATAAAGGTCTTGCATCTTCTCCAGATCACTGTGACCCTGTTTACAAGGATAGCTTCTaGGCCTTCAAGCCATATTTC +
Preference number: 4 (lower is better)
Translates to: SRTQNKGLASSPDHCDPVYKDSF*AFKPYF
Trigger: GAAATATGGCTTGAAGGCCCAGAAGCTATCCTTGTA...AACAGGGTCACAGTGATCTGGAGAAGATGCAAGACCTTTATTCTGAGTCCTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000433678.5
ENST00000448638.5
CDS-3UTR CCA 90 bp AATTATAAAAATGGAACTCTCCTCCAGTCAAAGCAGCAACCTCTTTCAAAAACCTGTTCGTCTCCGCACTaGTCTGCACGGACTCATTCT +
Preference number: 4 (lower is better)
Translates to: NYKNGTLLQSKQQPLSKTCSSPH*SARTHS
Trigger: AGAATGAGTCCGTGCAGACCAGTGCGGAGACGAACA...GGTTTTTGAAAGAGGTTGCTGCTTTGACTGGAGGAGAGTTCCATTTTTATAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000433678.5
CDS-3UTR CCA 90 bp GGATGTACATTTTCCCAGCTAGGATTTCACTTTCCAGCATCGACAGCTCTTTCAGCTCTTTCAGTGAAATaGGCCAATTCAACCGTTCTA +
Preference number: 4 (lower is better)
Translates to: GCTFSQLGFHFPASTALSALSVK*ANSTVL
Trigger: TAGAACGGTTGAATTGGCCCATTTCACTGAAAGAGC...TGAAAGAGCTGTCGATGCTGGAAAGTGAAATCCTAGCTGGGAAAATGTACATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR CCA 90 bp GGATTGAATTGCCTGTTCCACTTTTCGCTTGTAGATATTGAGTTTGGCTCCTTGTTGCATAATTCTTCTTaGCAGCCTCCTGGAGTTCCA +
Preference number: 4 (lower is better)
Translates to: GLNCLFHFSLVDIEFGSLLHNSS*QPPGVP
Trigger: TGGAACTCCAGGAGGCTGCCAAGAAGAATTATGCAA...CAAGGAGCCAAACTCAATATCTACAAGCGAAAAGTGGAACAGGCAATTCAATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR CCA 90 bp CGTTTGACCTGGTCTATAACTGTTTCAGGTGGAATGATACACATGACAGTCTCTCTGTCTTCAGCTGTATaGAATGAAGGAAACAGCTCC +
Preference number: 4 (lower is better)
Translates to: RLTWSITVSGGMIHMTVSLSSAV*NEGNSS
Trigger: GGAGCTGTTTCCTTCATTCCATACAGCTGAAGACAG...AGAGACTGTCATGTGTATCATTCCACCTGAAACAGTTATAGACCAGGTCAAACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000433678.5
ENST00000495571.5
CDS-3UTR CCA 90 bp TTGGCTCCTTGGGGGTTAATTAATGTCATCTTATTTGTGTCGTTGCACACATGTACAAGATTGCGGGCTTaGATCCTGACTATGCTGACT +
Preference number: 4 (lower is better)
Translates to: LAPWGLINVILFVSLHTCTRLRA*ILTMLT
Trigger: AGTCAGCATAGTCAGGATCCAAGCCCGCAATCTTGT...ACATGTGTGCAACGACACAAATAAGATGACATTAATTAACCCCCAAGGAGCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000489630.5
CDS-3UTR CCA 90 bp GTAAGAGTTTTTATTCTGGTTTCGGGCTCAATTAGAGTTACCTACAACAGACTCACCTCATGCCTTTCGTaGCCATTGTGTGCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: VRVFILVSGSIRVTYNRLTSCLS*PLCASV
Trigger: CACTGAAGCACACAATGGCCACGAAAGGCATGAGGT...GAGTCTGTTGTAGGTAACTCTAATTGAGCCCGAAACCAGAATAAAAACTCTTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614454.1
CDS-3UTR CCA 90 bp GTTTTTATTCTGGTTTCGGGCTCAATTAGAGTTACCTACAACAGACTCCGCGGAGGAACACCTCTTTTGTaGATTTCAACCTCATGCCTT +
Preference number: 4 (lower is better)
Translates to: VFILVSGSIRVTYNRLRGGTPLL*ISTSCL
Trigger: AAGGCATGAGGTTGAAATCCACAAAAGAGGTGTTCC...TCCGCGGAGTCTGTTGTAGGTAACTCTAATTGAGCCCGAAACCAGAATAAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614454.1
CDS-3UTR TCA 90 bp CGTTTGACCTGGTCTATAACTGTTTCAGGTGGAATGATACACATGACAGTCTCTATTTCTCAGATGAAATaGGACTCTGCTCAGCCAAGT +
Preference number: 4 (lower is better)
Translates to: RLTWSITVSGGMIHMTVSISQMK*DSAQPS
Trigger: ACTTGGCTGAGCAGAGTCTCATTTCATCTGAGAAAT...AGAGACTGTCATGTGTATCATTCCACCTGAAACAGTTATAGACCAGGTCAAACG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000433678.5
CDS-3UTR TCA 90 bp AATTTCCTGAAAACGTTTGACCTGGTCTATAACTGTTTCAGGTGGCTGATCAGGTTAAGCCCATGCAGTTaGAGCCATTTCTCAGATGAA +
Preference number: 4 (lower is better)
Translates to: NFLKTFDLVYNCFRWLIRLSPCS*SHFSDE
Trigger: TTCATCTGAGAAATGGCTTCAACTGCATGGGCTTAA...CCTGATCAGCCACCTGAAACAGTTATAGACCAGGTCAAACGTTTTCAGGAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416277.5
ENST00000448638.5
CDS-3UTR TCA 90 bp CTTTTCTGCATTGTACCACCAGTCCATGATCAAGGACTCAGAATAAAGGTCTTGTTAAGCCCATGCAGTTaGAGCCATTTCTCAGATGAA +
Preference number: 4 (lower is better)
Translates to: LFCIVPPVHDQGLRIKVLLSPCS*SHFSDE
Trigger: TTCATCTGAGAAATGGCTTCAACTGCATGGGCTTAA...CAAGACCTTTATTCTGAGTCCTTGATCATGGACTGGTGGTACAATGCAGAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000433678.5
ENST00000448638.5
CDS-3UTR TCA 90 bp AATTTCCTGAAAACGTTTGACCTGGTCTATAACTGTTTCAGGTGGCTGATCAGGTGGGAATCCGATCTGTaGCAAAATCTGTTTCAAGGT +
Preference number: 4 (lower is better)
Translates to: NFLKTFDLVYNCFRWLIRWESDL*QNLFQG
Trigger: ACCTTGAAACAGATTTTGTCACAGATCGGATTCCCA...CCTGATCAGCCACCTGAAACAGTTATAGACCAGGTCAAACGTTTTCAGGAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416277.5
ENST00000448638.5
CDS-3UTR TCA 90 bp TTCCTGTATGAACTGAATGATCTTGTCCTTCACCAAGTCCAGTTTGCTCTTCATCACTTCACAGGCTCTTaGGAAACCCGTATGATATTG +
Preference number: 4 (lower is better)
Translates to: FLYELNDLVLHQVQFALHHFTGS*ETRMIL
Trigger: CAATATCATACGGGTTTCTCAAGAGCCTGTGAAGTG...ATGAAGAGCAAACTGGACTTGGTGAAGGACAAGATCATTCAGTTCATACAGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
CDS-3UTR TCA 90 bp CAAAATTATAAAAATGGAACTCTCCTCCAGTCAAAGCAGCAACCTCTTTCAAAACTTCTCCTCTGGCGTTaGAGGACACTGTGTAGACTG +
Preference number: 4 (lower is better)
Translates to: QNYKNGTLLQSKQQPLSKLLLWR*RTLCRL
Trigger: CAGTCTACACAGTGTCCTTCAACGCCAGAGGAGAAG...TTTTGAAAGAGGTTGCTGCTTTGACTGGAGGAGAGTTCCATTTTTATAATTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000433678.5
CDS-3UTR TCA 90 bp CTTTATCAGCAAAAGCAGTTTTCAGGGCACTCAGGGTGTTTGTGGAGCTTCCAATCCTTTCAGTTTCCTTaGATTCCAAGTCATCACATT +
Preference number: 4 (lower is better)
Translates to: LYQQKQFSGHSGCLWSFQSFQFP*IPSHHI
Trigger: AATGTGATGACTTGGAATTCAAGGAAACTGAAAGGA...TTGGAAGCTCCACAAACACCCTGAGTGCCCTGAAAACTGCTTTTGCTGATAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000422503.6
ENST00000432242.5
CDS-3UTR TCA 90 bp AACTATACAGTAGGGGATGTTCAGTCTTGCAGATCTCAGACAAGTTACCGAGTCAGTGAGACGTGTCAATaGGAATGTAGATGCAATCAT +
Preference number: 4 (lower is better)
Translates to: NYTVGDVQSCRSQTSYRVSETCQ*ECRCNH
Trigger: ATGATTGCATCTACATTCTCATTGACACGTCTCACT...GACTCGGTAACTTGTCTGAGATCTGCAAGACTGAACATCCCCTACTGTATAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000477737.6
CDS-3UTR TCA 90 bp TTCCTGTATGAACTGAATGATCTTGTCCTTCACCAAGTCCAGTTTGCTCTTCATCAGTTTGCTCTTCATTaGGTGAGACGTGTCAATGAG +
Preference number: 4 (lower is better)
Translates to: FLYELNDLVLHQVQFALHQFALH*VRRVNE
Trigger: CTCATTGACACGTCTCACTCAATGAAGAGCAAACTG...ATGAAGAGCAAACTGGACTTGGTGAAGGACAAGATCATTCAGTTCATACAGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000422503.6
ENST00000432242.5
ENST00000448638.5
CDS-3UTR TCA 90 bp CGTTTGACCTGGTCTATAACTGTTTCAGGTGGAATGATACACATGACAGTCTCTTGTTCCTGTATGAACTaGATGATCTTGTCCTTCACC +
Preference number: 4 (lower is better)
Translates to: RLTWSITVSGGMIHMTVSCSCMN*MILSFT
Trigger: GGTGAAGGACAAGATCATTCAGTTCATACAGGAACA...AGAGACTGTCATGTGTATCATTCCACCTGAAACAGTTATAGACCAGGTCAAACG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000433678.5
ENST00000495571.5
CDS-3UTR TCA 90 bp AATGGAACTCTCCTCCAGTCAAAGCAGCAACCTCTTTCAAAAACCTGTTTGCAATGTTCCTGTATGAACTaGATGATCTTGTCCTTCACC +
Preference number: 4 (lower is better)
Translates to: NGTLLQSKQQPLSKTCLQCSCMN*MILSFT
Trigger: GGTGAAGGACAAGATCATTCAGTTCATACAGGAACA...TTGCAAACAGGTTTTTGAAAGAGGTTGCTGCTTTGACTGGAGGAGAGTTCCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000433678.5
ENST00000448638.5
ENST00000495571.5
CDS-3UTR TCA 90 bp GGATGTTCAGTCTTGCAGATCTCAGACAAGTTACCGAGTCTGAATTTCAGTCCTCCAAATTATCTTCATTaGCTTCAGCAAGTTGTTCCC +
Preference number: 4 (lower is better)
Translates to: GCSVLQISDKLPSLNFSPPNYLH*LQQVVP
Trigger: GGGAACAACTTGCTGAAGTCAATGAAGATAATTTGG...AGGACTGAAATTCAGACTCGGTAACTTGTCTGAGATCTGCAAGACTGAACATCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000477737.6
CDS-3UTR TCA 90 bp CGTTTGACCTGGTCTATAACTGTTTCAGGTGGAATGATACACATGACAGTCTCTTCTCTAATCCAGGACTaGGCCTGTTCCAAATTATCT +
Preference number: 4 (lower is better)
Translates to: RLTWSITVSGGMIHMTVSSLIQD*ACSKLS
Trigger: AGATAATTTGGAACAGGCTCAGTCCTGGATTAGAGA...AGAGACTGTCATGTGTATCATTCCACCTGAAACAGTTATAGACCAGGTCAAACG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000433678.5
ENST00000495571.5
CDS-3UTR TCA 90 bp ATGGAACTCTCCTCCAGTCAAAGCAGCAACCTCTTTCAAAAACCTGTTTGCAATTGTACCACCAGTCCATaGTCAAGGACTCAGAATAAA +
Preference number: 4 (lower is better)
Translates to: MELSSSQSSNLFQKPVCNCTTSP*SRTQNK
Trigger: TTTATTCTGAGTCCTTGATCATGGACTGGTGGTACA...ATTGCAAACAGGTTTTTGAAAGAGGTTGCTGCTTTGACTGGAGGAGAGTTCCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000433678.5
ENST00000448638.5
ENST00000495571.5
CDS-3UTR TCA 90 bp GGATTGAATTGCCTGTTCCACTTTTCGCTTGTAGATATTGAGTTTGGCTCCTTGGAATCGACATCAGATTaGGGCTTTGCACACTTTTCT +
Preference number: 4 (lower is better)
Translates to: GLNCLFHFSLVDIEFGSLESTSD*GFAHFS
Trigger: AGAAAAGTGTGCAAAGCCTCAATCTGATGTCGATTC...CAAGGAGCCAAACTCAATATCTACAAGCGAAAAGTGGAACAGGCAATTCAATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR TCA 90 bp TCAGTCTTGCAGATCTCAGACAAGTTACCGAGTCTGAATTTCAGTCCTAATATTTTCGCTTGTAGATATTaGGTTTGGCTCCTTGGGGGT +
Preference number: 4 (lower is better)
Translates to: SVLQISDKLPSLNFSPNIFACRY*VWLLGG
Trigger: ACCCCCAAGGAGCCAAACTCAATATCTACAAGCGAA...AATATTAGGACTGAAATTCAGACTCGGTAACTTGTCTGAGATCTGCAAGACTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR TCA 90 bp AGGCCCCATGGTCCCTTCAACATATTCAGAGATGAAGTTTGTGTTGAATCGACAAACTATTTTTCCAGATaGCTCGAAACTTGGAACAGC +
Preference number: 4 (lower is better)
Translates to: RPHGPFNIFRDEVCVESTNYFSR*LETWNS
Trigger: GCTGTTCCAAGTTTCGAGTCATCTGGAAAAATAGTT...TGTCGATTCAACACAAACTTCATCTCTGAATATGTTGAAGGGACCATGGGGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416277.5
CDS-3UTR TCA 90 bp CTTTATCAGCAAAAGCAGTTTTCAGGGCACTCAGGGTGTTTGTGGAGCTTCCAAACAAGTTACCGAGTCTaGATTTCAGTCCTAATATTG +
Preference number: 4 (lower is better)
Translates to: LYQQKQFSGHSGCLWSFQTSYRV*ISVLIL
Trigger: CAATATTAGGACTGAAATTCAGACTCGGTAACTTGT...TTGGAAGCTCCACAAACACCCTGAGTGCCCTGAAAACTGCTTTTGCTGATAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432242.5
CDS-3UTR GCA 90 bp CTTTTCTGCATTGTACCACCAGTCCATGATCAAGGACTCAGAATAAAGGTCTTGTTCAAGCCATATTTCTaGAGCCATGTCTTAGAGTCC +
Preference number: 4 (lower is better)
Translates to: LFCIVPPVHDQGLRIKVLFKPYF*SHVLES
Trigger: GGACTCTAAGACATGGCTGCAGAAATATGGCTTGAA...CAAGACCTTTATTCTGAGTCCTTGATCATGGACTGGTGGTACAATGCAGAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000433678.5
ENST00000448638.5
CDS-3UTR GCA 90 bp CGTTTGACCTGGTCTATAACTGTTTCAGGTGGAATGATACACATGACAGTCTCTGAGCATGGACAAACCTaGTGCAATATTTTGCATGGA +
Preference number: 4 (lower is better)
Translates to: RLTWSITVSGGMIHMTVSEHGQT*CNILHG
Trigger: TCCATGCAAAATATTGCAGCAGGTTTGTCCATGCTC...AGAGACTGTCATGTGTATCATTCCACCTGAAACAGTTATAGACCAGGTCAAACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433678.5
CDS-3UTR GCA 90 bp TTCCTGTATGAACTGAATGATCTTGTCCTTCACCAAGTCCAGTTTGCTCTTCATTCACCAAGTCCAGTTTaGTCTTCATTGAGTGAGACG +
Preference number: 4 (lower is better)
Translates to: FLYELNDLVLHQVQFALHSPSPV*SSLSET
Trigger: CGTCTCACTCAATGAAGAGCAAACTGGACTTGGTGA...ATGAAGAGCAAACTGGACTTGGTGAAGGACAAGATCATTCAGTTCATACAGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000422503.6
ENST00000432242.5
ENST00000448638.5
CDS-3UTR GCA 90 bp TTGGCTCCTTGGGGGTTAATTAATGTCATCTTATTTGTGTCGTTGCACACATGTTCACCAAGTCCAGTTTaGTCTTCATTGAGTGAGACG +
Preference number: 4 (lower is better)
Translates to: LAPWGLINVILFVSLHTCSPSPV*SSLSET
Trigger: CGTCTCACTCAATGAAGAGCAAACTGGACTTGGTGA...ACATGTGTGCAACGACACAAATAAGATGACATTAATTAACCCCCAAGGAGCCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432242.5
CDS-3UTR GCA 90 bp ATAAAAATGGAACTCTCCTCCAGTCAAAGCAGCAACCTCTTTCAAAAACCTGTTTTCCCGCCAAGCAACTaGTTGACCATCAAACTTCAC +
Preference number: 4 (lower is better)
Translates to: IKMELSSSQSSNLFQKPVFPPSN*LTIKLH
Trigger: GTGAAGTTTGATGGTCAAGCAGTTGCTTGGCGGGAA...AACAGGTTTTTGAAAGAGGTTGCTGCTTTGACTGGAGGAGAGTTCCATTTTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000433678.5
ENST00000448638.5
ENST00000495571.5
CDS-3UTR GCA 90 bp ATTTTCCCAGCTAGGATTTCACTTTCCAGCATCGACAGCTCTTTCAGTGAAATGGGTCAGAAGGTAGATTaGCTGTGTTTCTTTATCAGC +
Preference number: 4 (lower is better)
Translates to: IFPARISLSSIDSSFSEMGQKVD*LCFFIS
Trigger: GCTGATAAAGAAACACAGGCAATCTACCTTCTGACC...CATTTCACTGAAAGAGCTGTCGATGCTGGAAAGTGAAATCCTAGCTGGGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR GCA 90 bp GGATTGAATTGCCTGTTCCACTTTTCGCTTGTAGATATTGAGTTTGGCTCCTTGGGTCAGAAGGTAGATTaGCTGTGTTTCTTTATCAGC +
Preference number: 4 (lower is better)
Translates to: GLNCLFHFSLVDIEFGSLGQKVD*LCFFIS
Trigger: GCTGATAAAGAAACACAGGCAATCTACCTTCTGACC...CAAGGAGCCAAACTCAATATCTACAAGCGAAAAGTGGAACAGGCAATTCAATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR GCA 90 bp TTCCTGTATGAACTGAATGATCTTGTCCTTCACCAAGTCCAGTTTGCTCTTCATGTCTCCATCCTTTTCTaGATTGTACCACCAGTCCAT +
Preference number: 4 (lower is better)
Translates to: FLYELNDLVLHQVQFALHVSILF*IVPPVH
Trigger: ATGGACTGGTGGTACAATGCAGAAAAGGATGGAGAC...ATGAAGAGCAAACTGGACTTGGTGAAGGACAAGATCATTCAGTTCATACAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
CDS-3UTR GCA 90 bp GGATGTACATTTTCCCAGCTAGGATTTCACTTTCCAGCATCGACAGCTCTTTCATTTCCTTTTGATGCTTaGTGTCTCCATCCTTTTCTG +
Preference number: 4 (lower is better)
Translates to: GCTFSQLGFHFPASTALSFPFDA*CLHPFL
Trigger: CAGAAAAGGATGGAGACAGCAAGCATCAAAAGGAAA...TGAAAGAGCTGTCGATGCTGGAAAGTGAAATCCTAGCTGGGAAAATGTACATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000495571.5
CDS-3UTR GCA 90 bp AATGGAACTCTCCTCCAGTCAAAGCAGCAACCTCTTTCAAAAACCTGTTTGCAACCTCAGCCAGCAAGATaGTCATTTCTTTGTCACTTA +
Preference number: 4 (lower is better)
Translates to: NGTLLQSKQQPLSKTCLQPQPAR*SFLCHL
Trigger: TAAGTGACAAAGAAATGAGCATCTTGCTGGCTGAGG...TTGCAAACAGGTTTTTGAAAGAGGTTGCTGCTTTGACTGGAGGAGAGTTCCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
ENST00000495571.5
CDS-3UTR GCA 90 bp AATTATAAAAATGGAACTCTCCTCCAGTCAAAGCAGCAACCTCTTTCAAAAACCACCTTAGACACGACATaGTTGTCCAGGACGGGAACA +
Preference number: 4 (lower is better)
Translates to: NYKNGTLLQSKQQPLSKTTLDTT*LSRTGT
Trigger: TGTTCCCGTCCTGGACAAGCATGTCGTGTCTAAGGT...GGTTTTTGAAAGAGGTTGCTGCTTTGACTGGAGGAGAGTTCCATTTTTATAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
ENST00000495571.5
CDS-3UTR GCA 90 bp AGATGCAATCATTATGCAATCTTCCAAAGAGGCTTTGACTCCCATCCTGTAGCCAACCATTGTATACTCTaGCATCTTCTGCTCTGTAGA +
Preference number: 4 (lower is better)
Translates to: RCNHYAIFQRGFDSHPVANHCIL*HLLLCR
Trigger: TCTACAGAGCAGAAGATGGCAGAGTATACAATGGTT...GGCTACAGGATGGGAGTCAAAGCCTCTTTGGAAGATTGCATAATGATTGCATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422503.6
CDS-3UTR GCA 90 bp GTGAGACGTGTCAATGAGAATGTAGATGCAATCATTATGCAATCTTCCAAAGAGAGTCTCTCCCACTCATaGTGTCTTCAGCTGTATGGA +
Preference number: 4 (lower is better)
Translates to: VRRVNENVDAIIMQSSKESLSHS*CLQLYG
Trigger: TCCATACAGCTGAAGACAGCATGAGTGGGAGAGACT...CTCTTTGGAAGATTGCATAATGATTGCATCTACATTCTCATTGACACGTCTCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422503.6
ENST00000432242.5
CDS-3UTR GCA 90 bp TTCATAGGATTGAATTGCCTGTTCCACTTTTCGCTTGTAGATATTGAGTTTGGCAACAGTGGCATATTTTaGAGGTCAGGTTGGGACCTC +
Preference number: 4 (lower is better)
Translates to: FIGLNCLFHFSLVDIEFGNSGIF*RSGWDL
Trigger: GAGGTCCCAACCTGACCTGCAAAATATGCCACTGTT...GCCAAACTCAATATCTACAAGCGAAAAGTGGAACAGGCAATTCAATCCTATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432242.5
CDS-3UTR GCA 90 bp AGAATAAAGGTCTTGCATCTTCTCCAGATCACTGTGACCCTGTTCCATTTCCTTGCTGATCTTAATAAGTaGACTCCGAGGGCAAAATTC +
Preference number: 4 (lower is better)
Translates to: RIKVLHLLQITVTLFHFLADLNK*TPRAKF
Trigger: GAATTTTGCCCTCGGAGTGCACTTATTAAGATCAGC...AAGGAAATGGAACAGGGTCACAGTGATCTGGAGAAGATGCAAGACCTTTATTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000495571.5
CDS-3UTR GCA 90 bp ATGAAAATGTCAGGAAACTATACAGTAGGGGATGTTCAGTCTTGCAGATCTCAGTCTCTTAAACATAGCTaGCACCAGACGGCCTTAAAG +
Preference number: 4 (lower is better)
Translates to: MKMSGNYTVGDVQSCRSQSLKHS*HQTALK
Trigger: CTTTAAGGCCGTCTGGTGGCAGCTATGTTTAAGAGA...CTGAGATCTGCAAGACTGAACATCCCCTACTGTATAGTTTCCTGACATTTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CCA 90 bp AAACGTTTGACCTGGTCTATAACTGTTTCAGGTGGAATGATACACATGACAGTCTGCTCTGTAGAGCTGTaGAAACAGACCATCAGCATA +
Preference number: 4 (lower is better)
Translates to: KRLTWSITVSGGMIHMTVCSVEL*KQTISI
Trigger: TATGCTGATGGTCTGTTTCCACAGCTCTACAGAGCA...GACTGTCATGTGTATCATTCCACCTGAAACAGTTATAGACCAGGTCAAACGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000433678.5
CDS-3UTR CCA 90 bp CTTTATGTCTCTAATCCAGGACTGAGCCTGTTCCAAATTATCTTCATTGACTTCGTCCCAGGTGTCTTCTaGATTCGATGCAATCTCAAC +
Preference number: 4 (lower is better)
Translates to: LYVSNPGLSLFQIIFIDFVPGVF*IRCNLN
Trigger: GTTGAGATTGCATCGAATCCAGAAGACACCTGGGAC...GAAGTCAATGAAGATAATTTGGAACAGGCTCAGTCCTGGATTAGAGACATAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000422503.6
ENST00000432242.5
ENST00000448638.5
CDS-3UTR CCA 90 bp CTTTTCTGCATTGTACCACCAGTCCATGATCAAGGACTCAGAATAAAGGTCTTGTACAAGGATAGCTTCTaGGCCTTCAAGCCATATTTC +
Preference number: 4 (lower is better)
Translates to: LFCIVPPVHDQGLRIKVLYKDSF*AFKPYF
Trigger: GAAATATGGCTTGAAGGCCCAGAAGCTATCCTTGTA...CAAGACCTTTATTCTGAGTCCTTGATCATGGACTGGTGGTACAATGCAGAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000433678.5
ENST00000448638.5
CDS-3UTR CCA 90 bp AATTTCCTGAAAACGTTTGACCTGGTCTATAACTGTTTCAGGTGGCTGATCAGGACTCATTCTCCGGTTTaGCTTTTATATCCACAACCC +
Preference number: 4 (lower is better)
Translates to: NFLKTFDLVYNCFRWLIRTHSPV*LLYPQP
Trigger: GGGTTGTGGATATAAAAGCCAAACCGGAGAATGAGT...CCTGATCAGCCACCTGAAACAGTTATAGACCAGGTCAAACGTTTTCAGGAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416277.5
ENST00000448638.5
CDS-3UTR CCA 90 bp CAAAATTATAAAAATGGAACTCTCCTCCAGTCAAAGCAGCAACCTCTTTCAAAACAGCCTCTGGGGGAGTaGGATCCTTGCAACCAAAAT +
Preference number: 4 (lower is better)
Translates to: QNYKNGTLLQSKQQPLSKQPLGE*DPCNQN
Trigger: ATTTTGGTTGCAAGGATCCCACTCCCCCAGAGGCTG...TTTTGAAAGAGGTTGCTGCTTTGACTGGAGGAGAGTTCCATTTTTATAATTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 5 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000433678.5
ENST00000448638.5
ENST00000495571.5
CDS-3UTR CCA 90 bp ATTTTCCCAGCTAGGATTTCACTTTCCAGCATCGACAGCTCTTTCAGTGAAATGGCTCTTTCAGTGAAATaGGCCAATTCAACCGTTCTA +
Preference number: 4 (lower is better)
Translates to: IFPARISLSSIDSSFSEMALSVK*ANSTVL
Trigger: TAGAACGGTTGAATTGGCCCATTTCACTGAAAGAGC...CATTTCACTGAAAGAGCTGTCGATGCTGGAAAGTGAAATCCTAGCTGGGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR CCA 90 bp ACGTTTGACCTGGTCTATAACTGTTTCAGGTGGAATGATACACATGACAGTCTCGCTCTTTCAGTGAAATaGGCCAATTCAACCGTTCTA +
Preference number: 4 (lower is better)
Translates to: TFDLVYNCFRWNDTHDSLALSVK*ANSTVL
Trigger: TAGAACGGTTGAATTGGCCCATTTCACTGAAAGAGC...GAGACTGTCATGTGTATCATTCCACCTGAAACAGTTATAGACCAGGTCAAACGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000495571.5
CDS-3UTR CCA 90 bp AAAACAAGATTGCGGGCTTGGATCCTGACTATGCTGACTGCTAAACAATTTGAATTGCATAATTCTTCTTaGCAGCCTCCTGGAGTTCCA +
Preference number: 4 (lower is better)
Translates to: KTRLRAWILTMLTAKQFELHNSS*QPPGVP
Trigger: TGGAACTCCAGGAGGCTGCCAAGAAGAATTATGCAA...TTCAAATTGTTTAGCAGTCAGCATAGTCAGGATCCAAGCCCGCAATCTTGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CCA 90 bp ATAAAAATGGAACTCTCCTCCAGTCAAAGCAGCAACCTCTTTCAAAAACCTGTTCCATTTAATCCGCACTaGTCTGCACGGACTCATTCT +
Preference number: 4 (lower is better)
Translates to: IKMELSSSQSSNLFQKPVPFNPH*SARTHS
Trigger: AGAATGAGTCCGTGCAGACCAGTGCGGATTAAATGG...AACAGGTTTTTGAAAGAGGTTGCTGCTTTGACTGGAGGAGAGTTCCATTTTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
CDS-3UTR CCA 90 bp AAGACACATCTGAAGAATCGTGGTCATAAACCTGGCTTCCTTCTCGCGTCACCTTATAACTGTTTCAGGTaGAATGATACACATGACAGT +
Preference number: 4 (lower is better)
Translates to: KTHLKNRGHKPGFLLASPYNCFR*NDTHDS
Trigger: ACTGTCATGTGTATCATTCCACCTGAAACAGTTATA...AGGTGACGCGAGAAGGAAGCCAGGTTTATGACCACGATTCTTCAGATGTGTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000495571.5
3UTR CAA 72 bp TCCTTGAATTCCAAGTCATCACATTGTCACCATCCTTaGTGGAGAATGCAGGAAATTCTACACACTCTGTTC +
Preference number: 4 (lower is better)
Translates to: SLNSKSSHCHHP*WRMQEILHTLF
Trigger: GAACAGAGTGTGTAGAATTTCCTGCATTCTCCACAAAGGATGGTGACAATGTGATGACTTGGAATTCAAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422503.6
ENST00000432242.5
3UTR CAA 72 bp AATGTCAGGAAACTATACAGTAGGGGATGTTCAGTCTaGCAGATCTCAGACAAGTTACCGAGTCTGAATTTC +
Preference number: 4 (lower is better)
Translates to: NVRKLYSRGCSV*QISDKLPSLNF
Trigger: GAAATTCAGACTCGGTAACTTGTCTGAGATCTGCAAGACTGAACATCCCCTACTGTATAGTTTCCTGACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR TCA 90 bp AGATGCAATCATTATGCAATCTTCCAAAGAGGCTTTGACTCCCATCCTGTAGCCTCCTTTCAGTTTCCTTaGATTCCAAGTCATCACATT +
Preference number: 4 (lower is better)
Translates to: RCNHYAIFQRGFDSHPVASFQFP*IPSHHI
Trigger: AATGTGATGACTTGGAATTCAAGGAAACTGAAAGGA...GGCTACAGGATGGGAGTCAAAGCCTCTTTGGAAGATTGCATAATGATTGCATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000422503.6
ENST00000432242.5
CDS-3UTR TCA 90 bp AACTATACAGTAGGGGATGTTCAGTCTTGCAGATCTCAGACAAGTTACCGAGTCTCCTTTCAGTTTCCTTaGATTCCAAGTCATCACATT +
Preference number: 4 (lower is better)
Translates to: NYTVGDVQSCRSQTSYRVSFQFP*IPSHHI
Trigger: AATGTGATGACTTGGAATTCAAGGAAACTGAAAGGA...GACTCGGTAACTTGTCTGAGATCTGCAAGACTGAACATCCCCTACTGTATAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000477737.6
CDS-3UTR TCA 90 bp ACGTTTGACCTGGTCTATAACTGTTTCAGGTGGAATGATACACATGACAGTCTCAGTGAGACGTGTCAATaGGAATGTAGATGCAATCAT +
Preference number: 4 (lower is better)
Translates to: TFDLVYNCFRWNDTHDSLSETCQ*ECRCNH
Trigger: ATGATTGCATCTACATTCTCATTGACACGTCTCACT...GAGACTGTCATGTGTATCATTCCACCTGAAACAGTTATAGACCAGGTCAAACGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000433678.5
CDS-3UTR TCA 90 bp CCCATGGTCCCTTCAACATATTCAGAGATGAAGTTTGTGTTGAATCGACATCAGAGTGAGACGTGTCAATaGGAATGTAGATGCAATCAT +
Preference number: 4 (lower is better)
Translates to: PMVPSTYSEMKFVLNRHQSETCQ*ECRCNH
Trigger: ATGATTGCATCTACATTCTCATTGACACGTCTCACT...CTGATGTCGATTCAACACAAACTTCATCTCTGAATATGTTGAAGGGACCATGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
CDS-3UTR TCA 90 bp GAGAATGTAGATGCAATCATTATGCAATCTTCCAAAGAGGCTTTGACTCCCATCTGTTCCTGTATGAACTaGATGATCTTGTCCTTCACC +
Preference number: 4 (lower is better)
Translates to: ENVDAIIMQSSKEALTPICSCMN*MILSFT
Trigger: GGTGAAGGACAAGATCATTCAGTTCATACAGGAACA...GATGGGAGTCAAAGCCTCTTTGGAAGATTGCATAATGATTGCATCTACATTCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000422503.6
ENST00000432242.5
ENST00000448638.5
CDS-3UTR TCA 90 bp AATTTCCTGAAAACGTTTGACCTGGTCTATAACTGTTTCAGGTGGCTGATCAGGCCAAATTATCTTCATTaGCTTCAGCAAGTTGTTCCC +
Preference number: 4 (lower is better)
Translates to: NFLKTFDLVYNCFRWLIRPNYLH*LQQVVP
Trigger: GGGAACAACTTGCTGAAGTCAATGAAGATAATTTGG...CCTGATCAGCCACCTGAAACAGTTATAGACCAGGTCAAACGTTTTCAGGAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416277.5
ENST00000448638.5
CDS-3UTR TCA 90 bp AAAACAAGATTGCGGGCTTGGATCCTGACTATGCTGACTGCTAAACAATTTGAATGTACCACCAGTCCATaGTCAAGGACTCAGAATAAA +
Preference number: 4 (lower is better)
Translates to: KTRLRAWILTMLTAKQFECTTSP*SRTQNK
Trigger: TTTATTCTGAGTCCTTGATCATGGACTGGTGGTACA...TTCAAATTGTTTAGCAGTCAGCATAGTCAGGATCCAAGCCCGCAATCTTGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
CDS-3UTR TCA 90 bp AATTATAAAAATGGAACTCTCCTCCAGTCAAAGCAGCAACCTCTTTCAAAAACCTTCAGCTGTATGGAATaGAGGAAACAGCTCCAGAGC +
Preference number: 4 (lower is better)
Translates to: NYKNGTLLQSKQQPLSKTFSCME*RKQLQS
Trigger: GCTCTGGAGCTGTTTCCTTCATTCCATACAGCTGAA...GGTTTTTGAAAGAGGTTGCTGCTTTGACTGGAGGAGAGTTCCATTTTTATAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000433678.5
ENST00000495571.5
CDS-3UTR TCA 90 bp GGATGTTCAGTCTTGCAGATCTCAGACAAGTTACCGAGTCTGAATTTCAGTCCTACAAGTTACCGAGTCTaGATTTCAGTCCTAATATTG +
Preference number: 4 (lower is better)
Translates to: GCSVLQISDKLPSLNFSPTSYRV*ISVLIL
Trigger: CAATATTAGGACTGAAATTCAGACTCGGTAACTTGT...AGGACTGAAATTCAGACTCGGTAACTTGTCTGAGATCTGCAAGACTGAACATCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR TCA 90 bp TATAAAAATGGAACTCTCCTCCAGTCAAAGCAGCAACCTCTTTCAAAAACCTGTTGGCAGGGTAGGCTGTaGTACTTGAATATTTGCTGT +
Preference number: 4 (lower is better)
Translates to: YKNGTLLQSKQQPLSKTCWQGRL*YLNICC
Trigger: ACAGCAAATATTCAAGTATCACAGCCTACCCTGCCA...ACAGGTTTTTGAAAGAGGTTGCTGCTTTGACTGGAGGAGAGTTCCATTTTTATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000433678.5
CDS-3UTR GCA 90 bp CCCATGGTCCCTTCAACATATTCAGAGATGAAGTTTGTGTTGAATCGACATCAGTCAGATTGTATACTCTaGCATCTTCTGCTCTGTAGA +
Preference number: 4 (lower is better)
Translates to: PMVPSTYSEMKFVLNRHQSDCIL*HLLLCR
Trigger: TCTACAGAGCAGAAGATGGCAGAGTATACAATCTGA...CTGATGTCGATTCAACACAAACTTCATCTCTGAATATGTTGAAGGGACCATGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416277.5
ENST00000448638.5
CDS-3UTR GCA 90 bp CGTTTGACCTGGTCTATAACTGTTTCAGGTGGAATGATACACATGACAGTCTCTTCAGATTGTATACTCTaGCATCTTCTGCTCTGTAGA +
Preference number: 4 (lower is better)
Translates to: RLTWSITVSGGMIHMTVSSDCIL*HLLLCR
Trigger: TCTACAGAGCAGAAGATGGCAGAGTATACAATCTGA...AGAGACTGTCATGTGTATCATTCCACCTGAAACAGTTATAGACCAGGTCAAACG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433678.5
CDS-3UTR CCA 90 bp ATAAAAATGGAACTCTCCTCCAGTCAAAGCAGCAACCTCTTTCAAAAACCTGTTTGCTCTGTAGAGCTGTaGAAACAGACCATCAGCATA +
Preference number: 4 (lower is better)
Translates to: IKMELSSSQSSNLFQKPVCSVEL*KQTISI
Trigger: TATGCTGATGGTCTGTTTCCACAGCTCTACAGAGCA...AACAGGTTTTTGAAAGAGGTTGCTGCTTTGACTGGAGGAGAGTTCCATTTTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000433678.5
ENST00000448638.5
CDS-3UTR CCA 90 bp GTGAGACGTGTCAATGAGAATGTAGATGCAATCATTATGCAATCTTCCAAAGAGATCTGCTGTGGGTCTTaGCACTCAGATCCTTTAGAA +
Preference number: 4 (lower is better)
Translates to: VRRVNENVDAIIMQSSKEICCGS*HSDPLE
Trigger: TTCTAAAGGATCTGAGTGCCAAGACCCACAGCAGAT...CTCTTTGGAAGATTGCATAATGATTGCATCTACATTCTCATTGACACGTCTCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000422503.6
ENST00000432242.5
CDS-3UTR CCA 90 bp GAGAATGTAGATGCAATCATTATGCAATCTTCCAAAGAGGCTTTGACTCCCATCCACTCAGGGTGTTTGTaGAGCTTCCAATCTTTATGT +
Preference number: 4 (lower is better)
Translates to: ENVDAIIMQSSKEALTPIHSGCL*SFQSLC
Trigger: ACATAAAGATTGGAAGCTCCACAAACACCCTGAGTG...GATGGGAGTCAAAGCCTCTTTGGAAGATTGCATAATGATTGCATCTACATTCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000422503.6
ENST00000432242.5
ENST00000448638.5
CDS-3UTR CCA 90 bp TTAATGTCATCTTATTTGTGTCGTTGCACACATGTGCCAGAGGGAACACCTCATTTGAGTTTGGCTCCTTaGGGGTTAATTAATGTCATC +
Preference number: 4 (lower is better)
Translates to: LMSSYLCRCTHVPEGTPHLSLAP*GLINVI
Trigger: GATGACATTAATTAACCCCCAAGGAGCCAAACTCAA...ATGAGGTGTTCCCTCTGGCACATGTGTGCAACGACACAAATAAGATGACATTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR CCA 90 bp GATCAAGGACTCAGAATAAAGGTCTTGCATCTTCTCCAGATCACTGTGACCCTGTATAACTGTTTCAGGTaGAATGATACACATGACAGT +
Preference number: 4 (lower is better)
Translates to: DQGLRIKVLHLLQITVTLYNCFR*NDTHDS
Trigger: ACTGTCATGTGTATCATTCCACCTGAAACAGTTATA...CAGGGTCACAGTGATCTGGAGAAGATGCAAGACCTTTATTCTGAGTCCTTGATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000433678.5
ENST00000495571.5
CDS-3UTR TCA 90 bp CTTTATGTCTCTAATCCAGGACTGAGCCTGTTCCAAATTATCTTCATTGACTTCATTTCTCAGATGAAATaGGACTCTGCTCAGCCAAGT +
Preference number: 4 (lower is better)
Translates to: LYVSNPGLSLFQIIFIDFISQMK*DSAQPS
Trigger: ACTTGGCTGAGCAGAGTCTCATTTCATCTGAGAAAT...GAAGTCAATGAAGATAATTTGGAACAGGCTCAGTCCTGGATTAGAGACATAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000422503.6
ENST00000432242.5
ENST00000448638.5
CDS-3UTR TCA 90 bp CTTTATGTCTCTAATCCAGGACTGAGCCTGTTCCAAATTATCTTCATTGACTTCTTAAGCCCATGCAGTTaGAGCCATTTCTCAGATGAA +
Preference number: 4 (lower is better)
Translates to: LYVSNPGLSLFQIIFIDFLSPCS*SHFSDE
Trigger: TTCATCTGAGAAATGGCTTCAACTGCATGGGCTTAA...GAAGTCAATGAAGATAATTTGGAACAGGCTCAGTCCTGGATTAGAGACATAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000422503.6
ENST00000432242.5
ENST00000448638.5
CDS-3UTR TCA 90 bp ATAAAAATGGAACTCTCCTCCAGTCAAAGCAGCAACCTCTTTCAAAAACCTGTTTGGGAATCCGATCTGTaGCAAAATCTGTTTCAAGGT +
Preference number: 4 (lower is better)
Translates to: IKMELSSSQSSNLFQKPVWESDL*QNLFQG
Trigger: ACCTTGAAACAGATTTTGTCACAGATCGGATTCCCA...AACAGGTTTTTGAAAGAGGTTGCTGCTTTGACTGGAGGAGAGTTCCATTTTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000433678.5
ENST00000448638.5
CDS-3UTR TCA 90 bp TTTGATCTGAAAGGCCCCATGGTCCCTTCAACATATTCAGAGATGAAGTTTGTGTCCTTTCAGTTTCCTTaGATTCCAAGTCATCACATT +
Preference number: 4 (lower is better)
Translates to: FDLKGPMVPSTYSEMKFVSFQFP*IPSHHI
Trigger: AATGTGATGACTTGGAATTCAAGGAAACTGAAAGGA...CACAAACTTCATCTCTGAATATGTTGAAGGGACCATGGGGCCTTTCAGATCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416277.5
ENST00000432242.5
CDS-3UTR TCA 90 bp CTTTTCTGCATTGTACCACCAGTCCATGATCAAGGACTCAGAATAAAGGTCTTGTCCTTTCAGTTTCCTTaGATTCCAAGTCATCACATT +
Preference number: 4 (lower is better)
Translates to: LFCIVPPVHDQGLRIKVLSFQFP*IPSHHI
Trigger: AATGTGATGACTTGGAATTCAAGGAAACTGAAAGGA...CAAGACCTTTATTCTGAGTCCTTGATCATGGACTGGTGGTACAATGCAGAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000433678.5
CDS-3UTR TCA 90 bp AATGGAACTCTCCTCCAGTCAAAGCAGCAACCTCTTTCAAAAACCTGTTTGCAATTTTCTTTTTCCTCTTaGGATAATGCTCGCCAAACA +
Preference number: 4 (lower is better)
Translates to: NGTLLQSKQQPLSKTCLQFSFSS*DNARQT
Trigger: TGTTTGGCGAGCATTATCTCAAGAGGAAAAAGAAAA...TTGCAAACAGGTTTTTGAAAGAGGTTGCTGCTTTGACTGGAGGAGAGTTCCATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000495571.5
CDS-3UTR TCA 90 bp AATTATAAAAATGGAACTCTCCTCCAGTCAAAGCAGCAACCTCTTTCAAAAACCATGTCCTGTCTAATGTaGGTTTCCTCATCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: NYKNGTLLQSKQQPLSKTMSCLM*VSSSVA
Trigger: AGCCACAGATGAGGAAACTCACATTAGACAGGACAT...GGTTTTTGAAAGAGGTTGCTGCTTTGACTGGAGGAGAGTTCCATTTTTATAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000433678.5
ENST00000495571.5
CDS-3UTR GCA 90 bp CTTTATGTCTCTAATCCAGGACTGAGCCTGTTCCAAATTATCTTCATTGACTTCGATGAAATGAGACTCTaGTCAGCCAAGTCTGTTTTG +
Preference number: 4 (lower is better)
Translates to: LYVSNPGLSLFQIIFIDFDEMRL*SAKSVL
Trigger: CAAAACAGACTTGGCTGAGCAGAGTCTCATTTCATC...GAAGTCAATGAAGATAATTTGGAACAGGCTCAGTCCTGGATTAGAGACATAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000422503.6
ENST00000432242.5
ENST00000448638.5
CDS-3UTR GCA 90 bp TATAAAAATGGAACTCTCCTCCAGTCAAAGCAGCAACCTCTTTCAAAAACCTGTGATGAAATGAGACTCTaGTCAGCCAAGTCTGTTTTG +
Preference number: 4 (lower is better)
Translates to: YKNGTLLQSKQQPLSKTCDEMRL*SAKSVL
Trigger: CAAAACAGACTTGGCTGAGCAGAGTCTCATTTCATC...ACAGGTTTTTGAAAGAGGTTGCTGCTTTGACTGGAGGAGAGTTCCATTTTTATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000433678.5
ENST00000448638.5
CDS-3UTR GCA 90 bp GTGAGACGTGTCAATGAGAATGTAGATGCAATCATTATGCAATCTTCCAAAGAGTTCAAGCCATATTTCTaGAGCCATGTCTTAGAGTCC +
Preference number: 4 (lower is better)
Translates to: VRRVNENVDAIIMQSSKEFKPYF*SHVLES
Trigger: GGACTCTAAGACATGGCTGCAGAAATATGGCTTGAA...CTCTTTGGAAGATTGCATAATGATTGCATCTACATTCTCATTGACACGTCTCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000422503.6
ENST00000432242.5
ENST00000448638.5
CDS-3UTR GCA 90 bp CAAAATTATAAAAATGGAACTCTCCTCCAGTCAAAGCAGCAACCTCTTTCAAAATTCCCGCCAAGCAACTaGTTGACCATCAAACTTCAC +
Preference number: 4 (lower is better)
Translates to: QNYKNGTLLQSKQQPLSKFPPSN*LTIKLH
Trigger: GTGAAGTTTGATGGTCAAGCAGTTGCTTGGCGGGAA...TTTTGAAAGAGGTTGCTGCTTTGACTGGAGGAGAGTTCCATTTTTATAATTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000433678.5
ENST00000448638.5
ENST00000495571.5
CDS-3UTR GCA 90 bp TCAGTCTTGCAGATCTCAGACAAGTTACCGAGTCTGAATTTCAGTCCTAATATTCCTCAGCCAGCAAGATaGTCATTTCTTTGTCACTTA +
Preference number: 4 (lower is better)
Translates to: SVLQISDKLPSLNFSPNIPQPAR*SFLCHL
Trigger: TAAGTGACAAAGAAATGAGCATCTTGCTGGCTGAGG...AATATTAGGACTGAAATTCAGACTCGGTAACTTGTCTGAGATCTGCAAGACTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR GCA 90 bp ATTTTCCCAGCTAGGATTTCACTTTCCAGCATCGACAGCTCTTTCAGTGAAATGTTCATAGGATTGAATTaGCTGTTCCACTTTTCGCTT +
Preference number: 4 (lower is better)
Translates to: IFPARISLSSIDSSFSEMFIGLN*LFHFSL
Trigger: AAGCGAAAAGTGGAACAGGCAATTCAATCCTATGAA...CATTTCACTGAAAGAGCTGTCGATGCTGGAAAGTGAAATCCTAGCTGGGAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR CCA 90 bp AATTATAAAAATGGAACTCTCCTCCAGTCAAAGCAGCAACCTCTTTCAAAAACCATCTGCTGTGGGTCTTaGCACTCAGATCCTTTAGAA +
Preference number: 4 (lower is better)
Translates to: NYKNGTLLQSKQQPLSKTICCGS*HSDPLE
Trigger: TTCTAAAGGATCTGAGTGCCAAGACCCACAGCAGAT...GGTTTTTGAAAGAGGTTGCTGCTTTGACTGGAGGAGAGTTCCATTTTTATAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000433678.5
CDS-3UTR CCA 90 bp TATAAAAATGGAACTCTCCTCCAGTCAAAGCAGCAACCTCTTTCAAAAACCTGTCACTCAGGGTGTTTGTaGAGCTTCCAATCTTTATGT +
Preference number: 4 (lower is better)
Translates to: YKNGTLLQSKQQPLSKTCHSGCL*SFQSLC
Trigger: ACATAAAGATTGGAAGCTCCACAAACACCCTGAGTG...ACAGGTTTTTGAAAGAGGTTGCTGCTTTGACTGGAGGAGAGTTCCATTTTTATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000433678.5
ENST00000448638.5
ENST00000495571.5
CDS-3UTR CCA 90 bp CAAAATTATAAAAATGGAACTCTCCTCCAGTCAAAGCAGCAACCTCTTTCAAAAGAGTTTCCTCATCTGTaGCTCAGAACTGATACTCCC +
Preference number: 4 (lower is better)
Translates to: QNYKNGTLLQSKQQPLSKEFPHL*LRTDTP
Trigger: GGGAGTATCAGTTCTGAGCCACAGATGAGGAAACTC...TTTTGAAAGAGGTTGCTGCTTTGACTGGAGGAGAGTTCCATTTTTATAATTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000433678.5
ENST00000495571.5
CDS-3UTR GCA 90 bp GTGAGACGTGTCAATGAGAATGTAGATGCAATCATTATGCAATCTTCCAAAGAGTTTCCTTTTGATGCTTaGTGTCTCCATCCTTTTCTG +
Preference number: 4 (lower is better)
Translates to: VRRVNENVDAIIMQSSKEFPFDA*CLHPFL
Trigger: CAGAAAAGGATGGAGACAGCAAGCATCAAAAGGAAA...CTCTTTGGAAGATTGCATAATGATTGCATCTACATTCTCATTGACACGTCTCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
3UTR CAA 72 bp ATGGTCCCTTCAACATATTCAGAGATGAAGTTTGTGTaGAATCGACATCAGATTGAGGCTTTGCACACTTTT +
Preference number: 4 (lower is better)
Translates to: MVPSTYSEMKFV*NRHQIEALHTF
Trigger: AAAAGTGTGCAAAGCCTCAATCTGATGTCGATTCAACACAAACTTCATCTCTGAATATGTTGAAGGGACCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
ENST00000495571.5
CDS-3UTR GCA 90 bp AATTATAAAAATGGAACTCTCCTCCAGTCAAAGCAGCAACCTCTTTCAAAAACCATCCTTTGTGGAGAATaGAGGAAATTCTACACACTC +
Preference number: 4 (lower is better)
Translates to: NYKNGTLLQSKQQPLSKTILCGE*RKFYTL
Trigger: GAGTGTGTAGAATTTCCTGCATTCTCCACAAAGGAT...GGTTTTTGAAAGAGGTTGCTGCTTTGACTGGAGGAGAGTTCCATTTTTATAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000433678.5
CDS-3UTR CCA 90 bp TTCATAGGATTGAATTGCCTGTTCCACTTTTCGCTTGTAGATATTGAGTTTGGCTGTAGAATTTTTCTGTaGCCACATGCTTATTGGGAA +
Preference number: 4 (lower is better)
Translates to: FIGLNCLFHFSLVDIEFGCRIFL*PHAYWE
Trigger: TTCCCAATAAGCATGTGGCCACAGAAAAATTCTACA...GCCAAACTCAATATCTACAAGCGAAAAGTGGAACAGGCAATTCAATCCTATGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR GCA 90 bp AATGTAAGAGTTTTTATTCTGGTTTCGGGCTCAATTAGAGTTACCTACAACAGATTCATAGGATTGAATTaGCTGTTCCACTTTTCGCTT +
Preference number: 4 (lower is better)
Translates to: NVRVFILVSGSIRVTYNRFIGLN*LFHFSL
Trigger: AAGCGAAAAGTGGAACAGGCAATTCAATCCTATGAA...TCTGTTGTAGGTAACTCTAATTGAGCCCGAAACCAGAATAAAAACTCTTACATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
ENST00000495571.5
ENST00000614454.1
CDS-3UTR CAA 90 bp ACAGACAGGGCAGGCATAGGCGGCGCGGAGGGCGGCCTTACCTCCGCGGAGGGGTCCGAGCGCGGTCTGTaGACGACGGCGTCTCCGCGG +
Preference number: 5 (lower is better)
Translates to: TDRAGIGGAEGGLTSAEGSERGL*TTASPR
Trigger: CCGCGGAGACGCCGTCGTCAACAGACCGCGCTCGGA...CCCCTCCGCGGAGGTAAGGCCGCCCTCCGCGCCGCCTATGCCTGCCCTGTCTGT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432242.5
CDS TCA 90 bp AAACCCTGGGCTCGGGGTGTGTCCCCTGGCAGGACCCATGGGAGCTaGTGCCGTGGGAGGAGCCGTCCGAGTCCGAGGGCGCCGCCTGCT +
Preference number: 5 (lower is better)
Translates to: KPWARGVSPGRTHGS*CRGRSRPSPRAPPA
Trigger: AGCAGGCGGCGCCCTCGGACTCGGACGGCTCCTCCCACGGCATCAGCTCCCATGGGTCCTGCCAGGGGACACACCCCGAGCCCAGGGTTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473149.5
CDS CCA 90 bp ATCACCCAAACCCTGGGCTCGGGGTGTGTCCCCTGGCAGGACCCATaGGAGCTGATGCCGTGGGAGGAGCCGTCCGAGTCCGAGGGCGCC +
Preference number: 5 (lower is better)
Translates to: ITQTLGSGCVPWQDP*ELMPWEEPSESEGA
Trigger: GGCGCCCTCGGACTCGGACGGCTCCTCCCACGGCATCAGCTCCCATGGGTCCTGCCAGGGGACACACCCCGAGCCCAGGGTTTGGGTGAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473149.5
CDS-3UTR CAA 90 bp CAGGGCAGGCATAGGCGGCGCGGAGGGCGGCCTTACCTCCGCGGAGGGGCCAGTCTCCCGGGGCCTTGTTaGCATAATTCTTCTTGGCAG +
Preference number: 5 (lower is better)
Translates to: QGRHRRRGGRPYLRGGASLPGPC*HNSSWQ
Trigger: CTGCCAAGAAGAATTATGCAAACAAGGCCCCGGGAG...ACTGGCCCCTCCGCGGAGGTAAGGCCGCCCTCCGCGCCGCCTATGCCTGCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS CCA 90 bp GGGCGAAGGATTCCAGCTGTTCTAGGTCTCTGTGACCCGCGCCTCTaGTTCCGAGCGCGGTCTGTTGACGACGGCGTCTCCGCGGTTGCC +
Preference number: 5 (lower is better)
Translates to: GRRIPAVLGLCDPRL*FRARSVDDGVSAVA
Trigger: GGCAACCGCGGAGACGCCGTCGTCAACAGACCGCGCTCGGAACCAGAGGCGCGGGTCACAGAGACCTAGAACAGCTGGAATCCTTCGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432242.5
CDS-3UTR CAA 90 bp CAGGGCAGGCATAGGCGGCGCGGAGGGCGGCCTTACCTCCGCGGAGGGGCCAGTATGGATTCAATAGTCTaGTCTCTCCCGGCTTCCAGC +
Preference number: 5 (lower is better)
Translates to: QGRHRRRGGRPYLRGGASMDSIV*SLPASS
Trigger: GCTGGAAGCCGGGAGAGACAAGACTATTGAATCCAT...ACTGGCCCCTCCGCGGAGGTAAGGCCGCCCTCCGCGCCGCCTATGCCTGCCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000477737.6
CDS-3UTR CAA 90 bp GGAGGGGAGAGGAGTCTTTGCTACAGACAGGGCAGGCATAGGCGGCGCGGAGGGACGCTCCTCAGCCCTTaGCTGCTGTGGGTGGCTTGG +
Preference number: 5 (lower is better)
Translates to: GGERSLCYRQGRHRRRGGTLLSP*LLWVAW
Trigger: CCAAGCCACCCACAGCAGCAAAGGGCTGAGGAGCGT...CCCTCCGCGCCGCCTATGCCTGCCCTGTCTGTAGCAAAGACTCCTCTCCCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CAA 90 bp GACAGGGCAGGCATAGGCGGCGCGGAGGGCGGCCTTACCTCCGCGGAGGGGCCACACTTGCACTTCTCTTaGGTAATGTTGACGTGGACC +
Preference number: 5 (lower is better)
Translates to: DRAGIGGAEGGLTSAEGPHLHFS*VMLTWT
Trigger: GGTCCACGTCAACATTACCAAAGAGAAGTGCAAGTG...TGGCCCCTCCGCGGAGGTAAGGCCGCCCTCCGCGCCGCCTATGCCTGCCCTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477737.6
CDS-3UTR CAA 90 bp CAGGGCAGGCATAGGCGGCGCGGAGGGCGGCCTTACCTCCGCGGAGGGGCCAGTCTGGATCCTCAGGAATaGGGGGTGACTTTATATGAG +
Preference number: 5 (lower is better)
Translates to: QGRHRRRGGRPYLRGGASLDPQE*GVTLYE
Trigger: CTCATATAAAGTCACCCCCAATTCCTGAGGATCCAG...ACTGGCCCCTCCGCGGAGGTAAGGCCGCCCTCCGCGCCGCCTATGCCTGCCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CAA 90 bp AGGAGTCTTTGCTACAGACAGGGCAGGCATAGGCGGCGCGGAGGGCGGCCTTACACGCTCCTCAGCCCTTaGCTGCTGTGGGTGGCTTGG +
Preference number: 5 (lower is better)
Translates to: RSLCYRQGRHRRRGGRPYTLLSP*LLWVAW
Trigger: CCAAGCCACCCACAGCAGCAAAGGGCTGAGGAGCGT...GTAAGGCCGCCCTCCGCGCCGCCTATGCCTGCCCTGTCTGTAGCAAAGACTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CAA 90 bp ACAGTCAGAAAAAGCCAGAACCAAGTCGTCAAACGGGTAGGGGAGGCAGCAGGGGTGGCCACGTCGGGCTaGGGAGGCTCGGCCACCAGC +
Preference number: 5 (lower is better)
Translates to: TVRKSQNQVVKRVGEAAGVATSG*GGSATS
Trigger: GCTGGTGGCCGAGCCTCCCAAGCCCGACGTGGCCAC...CCCTGCTGCCTCCCCTACCCGTTTGACGACTTGGTTCTGGCTTTTTCTGACTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000477737.6
CDS-3UTR CAA 90 bp CAGGGCAGGCATAGGCGGCGCGGAGGGCGGCCTTACCTCCGCGGAGGGGCCAGTGACTCATTCTCCGGTTaGGCTTTTATATCCACAACC +
Preference number: 5 (lower is better)
Translates to: QGRHRRRGGRPYLRGGASDSFSG*AFISTT
Trigger: GGTTGTGGATATAAAAGCCAAACCGGAGAATGAGTC...ACTGGCCCCTCCGCGGAGGTAAGGCCGCCCTCCGCGCCGCCTATGCCTGCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000477737.6
CDS-3UTR CAA 90 bp ACAGACAGGGCAGGCATAGGCGGCGCGGAGGGCGGCCTTACCTCCGCGGAGGGGCCGCCAAGCAACTGCTaGACCATCAAACTTCACAAA +
Preference number: 5 (lower is better)
Translates to: TDRAGIGGAEGGLTSAEGPPSNC*TIKLHK
Trigger: TTTGTGAAGTTTGATGGTCAAGCAGTTGCTTGGCGG...CCCCTCCGCGGAGGTAAGGCCGCCCTCCGCGCCGCCTATGCCTGCCCTGTCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000477737.6
CDS-3UTR CAA 90 bp ACAGACAGGGCAGGCATAGGCGGCGCGGAGGGCGGCCTTACCTCCGCGGAGGGGCCATCCTTTTCTGCATaGTACCACCAGTCCATGATC +
Preference number: 5 (lower is better)
Translates to: TDRAGIGGAEGGLTSAEGPSFSA*YHQSMI
Trigger: GATCATGGACTGGTGGTACAATGCAGAAAAGGATGG...CCCCTCCGCGGAGGTAAGGCCGCCCTCCGCGCCGCCTATGCCTGCCCTGTCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
CDS-3UTR CAA 90 bp ACAGACAGGGCAGGCATAGGCGGCGCGGAGGGCGGCCTTACCTCCGCGGAGGGGATCTTATTTGTGTCGTaGCACACATGTGCCAGAGGG +
Preference number: 5 (lower is better)
Translates to: TDRAGIGGAEGGLTSAEGILFVS*HTCARG
Trigger: CCCTCTGGCACATGTGTGCAACGACACAAATAAGAT...CCCCTCCGCGGAGGTAAGGCCGCCCTCCGCGCCGCCTATGCCTGCCCTGTCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CAA 90 bp GTCTTTGCTACAGACAGGGCAGGCATAGGCGGCGCGGAGGGCGGCCTTACCTCCTGGGCTTCTCTCGTCTaGGCTCTCTGGAATCCTGCG +
Preference number: 5 (lower is better)
Translates to: VFATDRAGIGGAEGGLTSWASLV*ALWNPA
Trigger: CGCAGGATTCCAGAGAGCCAAGACGAGAGAAGCCCA...GGAGGTAAGGCCGCCCTCCGCGCCGCCTATGCCTGCCCTGTCTGTAGCAAAGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CAA 90 bp GGAGGGCGGCCTTACCTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCGCTCCTGGAGAACCATaGTTAGAGCCTCTCGGCACA +
Preference number: 5 (lower is better)
Translates to: GGRPYLRGGASFSVNAEVAPGEP*LEPLGT
Trigger: TGTGCCGAGAGGCTCTAACAATGGTTCTCCAGGAGC...GACCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGGTAAGGCCGCCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000477737.6
CDS-3UTR CAA 90 bp ACAGACAGGGCAGGCATAGGCGGCGCGGAGGGCGGCCTTACCTCCGCGGAGGGGCCACTTCACAGGCTCTaGAGAAACCCGTATGATATT +
Preference number: 5 (lower is better)
Translates to: TDRAGIGGAEGGLTSAEGPLHRL*RNPYDI
Trigger: AATATCATACGGGTTTCTCAAGAGCCTGTGAAGTGG...CCCCTCCGCGGAGGTAAGGCCGCCCTCCGCGCCGCCTATGCCTGCCCTGTCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000477737.6
CDS-3UTR CAA 90 bp GGAGTCTTTGCTACAGACAGGGCAGGCATAGGCGGCGCGGAGGGCGGCCTTACCGCATGGACTGTCTTCTaGTTCGTCTCCGCACTGGTC +
Preference number: 5 (lower is better)
Translates to: GVFATDRAGIGGAEGGLTAWTVF*FVSALV
Trigger: GACCAGTGCGGAGACGAACAAGAAGACAGTCCATGC...GGTAAGGCCGCCCTCCGCGCCGCCTATGCCTGCCCTGTCTGTAGCAAAGACTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477737.6
CDS-3UTR CAA 90 bp CTCTCCCGGCTTCCAGCAGAGCATCCAGGCGGCCAGCCTCGCTCACAGTCAGCTTCCAGAGCGAGAGACTaGGGCTTGAAGCTCATCCAG +
Preference number: 5 (lower is better)
Translates to: LSRLPAEHPGGQPRSQSASRARD*GLKLIQ
Trigger: CTGGATGAGCTTCAAGCCCAAGTCTCTCGCTCTGGA...AGCTGACTGTGAGCGAGGCTGGCCGCCTGGATGCTCTGCTGGAAGCCGGGAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422503.6
ENST00000432242.5
CDS-3UTR CAA 90 bp GGCTTGGAGAGTACAGGGCAGGGCTGCTCGAGGTGGAGGTGTGGCAATGATGGCGAAGCCCACCAGTGCTaGGGTGCGGCTCACACACTT +
Preference number: 5 (lower is better)
Translates to: GLESTGQGCSRWRCGNDGEAHQC*GAAHTL
Trigger: AAGTGTGTGAGCCGCACCCAAGCACTGGTGGGCTTC...GCCATCATTGCCACACCTCCACCTCGAGCAGCCCTGCCCTGTACTCTCCAAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR CAA 90 bp CAGGGCAGGGCTGCTCGAGGTGGAGGTGTGGCAATGATGGCGTGGCTGCTGAGTTGGGCTTCTCTCGTCTaGGCTCTCTGGAATCCTGCG +
Preference number: 5 (lower is better)
Translates to: QGRAARGGGVAMMAWLLSWASLV*ALWNPA
Trigger: CGCAGGATTCCAGAGAGCCAAGACGAGAGAAGCCCA...ACTCAGCAGCCACGCCATCATTGCCACACCTCCACCTCGAGCAGCCCTGCCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR CAA 90 bp TCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCTGAACAGCCTGGAAGGACGCTCCTCAGCCCTTaGCTGCTGTGGGTGGCTTGG +
Preference number: 5 (lower is better)
Translates to: SAEGPVSVSTLRSEQPGRTLLSP*LLWVAW
Trigger: CCAAGCCACCCACAGCAGCAAAGGGCTGAGGAGCGT...CCTTCCAGGCTGTTCAGACCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
ENST00000495571.5
ENST00000614454.1
CDS CCA 90 bp ATGATGGCGTGGCTGCTGAGTCCTAGACGCCCGGCCGCGGGGAAGTaGAGGTGGGCTGTCTGGGGAAGCAGAGTTCAGCATTACTTAAGG +
Preference number: 5 (lower is better)
Translates to: MMAWLLSPRRPAAGK*RWAVWGSRVQHYLR
Trigger: CCTTAAGTAATGCTGAACTCTGCTTCCCCAGACAGCCCACCTCCACTTCCCCGCGGCCGGGCGTCTAGGACTCAGCAGCCACGCCATCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473149.5
CDS-3UTR CAA 90 bp ACAGACAGGGCAGGCATAGGCGGCGCGGAGGGCGGCCTTACCTCCGCGGAGGGGTGTTTCAAGGTCAATTaGTTGCTCTTAAGCCCATGC +
Preference number: 5 (lower is better)
Translates to: TDRAGIGGAEGGLTSAEGCFKVN*LLLSPC
Trigger: GCATGGGCTTAAGAGCAACAAATTGACCTTGAAACA...CCCCTCCGCGGAGGTAAGGCCGCCCTCCGCGCCGCCTATGCCTGCCCTGTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000477737.6
CDS-3UTR CAA 90 bp GGCGCGGAGGGCGGCCTTACCTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGCCATCCTTTTCTGCATaGTACCACCAGTCCATGATC +
Preference number: 5 (lower is better)
Translates to: GAEGGLTSAEGPVSVSTLPSFSA*YHQSMI
Trigger: GATCATGGACTGGTGGTACAATGCAGAAAAGGATGG...CAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGGTAAGGCCGCCCTCCGCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
CDS-3UTR CAA 90 bp GTCTTTGCTACAGACAGGGCAGGCATAGGCGGCGCGGAGGGCGGCCTTACCTCCTCCTTGCAATTTCTGTaGCTCTCCCGGGGCCTTGTT +
Preference number: 5 (lower is better)
Translates to: VFATDRAGIGGAEGGLTSSLQFL*LSRGLV
Trigger: AACAAGGCCCCGGGAGAGCAACAGAAATTGCAAGGA...GGAGGTAAGGCCGCCCTCCGCGCCGCCTATGCCTGCCCTGTCTGTAGCAAAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CAA 90 bp ACAGACAGGGCAGGCATAGGCGGCGCGGAGGGCGGCCTTACCTCCGCGGAGGGGATAACCTTCTGTCCTTaGAGGGGATCTGGTCTTTTT +
Preference number: 5 (lower is better)
Translates to: TDRAGIGGAEGGLTSAEGITFCP*RGSGLF
Trigger: AAAAAGACCAGATCCCCTCAAAGGACAGAAGGTTAT...CCCCTCCGCGGAGGTAAGGCCGCCCTCCGCGCCGCCTATGCCTGCCCTGTCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CAA 90 bp GGCAGGCATAGGCGGCGCGGAGGGCGGCCTTACCTCCGCGGAGGGGCCAGTTTCATAACCTTCTGTCCTTaGAGGGGATCTGGTCTTTTT +
Preference number: 5 (lower is better)
Translates to: GRHRRRGGRPYLRGGASFITFCP*RGSGLF
Trigger: AAAAAGACCAGATCCCCTCAAAGGACAGAAGGTTAT...GAAACTGGCCCCTCCGCGGAGGTAAGGCCGCCCTCCGCGCCGCCTATGCCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CAA 90 bp GACAGGGCAGGCATAGGCGGCGCGGAGGGCGGCCTTACCTCCGCGGAGGGGCCACAAAATTCTCTCCGGTaGTTACACTTCAAAACTGTG +
Preference number: 5 (lower is better)
Translates to: DRAGIGGAEGGLTSAEGPQNSLR*LHFKTV
Trigger: CACAGTTTTGAAGTGTAACAACCGGAGAGAATTTTG...TGGCCCCTCCGCGGAGGTAAGGCCGCCCTCCGCGCCGCCTATGCCTGCCCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CAA 90 bp GCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCTGAACAGCCTGGAAGGACGTGCTGGAGTGGCTGCTaGGCGGGCCTCTTTTTCCTC +
Preference number: 5 (lower is better)
Translates to: AEGPVSVSTLRSEQPGRTCWSGC*AGLFFL
Trigger: GAGGAAAAAGAGGCCCGCCAAGCAGCCACTCCAGCA...CGTCCTTCCAGGCTGTTCAGACCTCAGCGTTGACACTGAAACTGGCCCCTCCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
ENST00000495571.5
ENST00000614454.1
CDS-3UTR CAA 90 bp CTTACCTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCTGAACAGCCTACGCTCCTCAGCCCTTaGCTGCTGTGGGTGGCTTGG +
Preference number: 5 (lower is better)
Translates to: LTSAEGPVSVSTLRSEQPTLLSP*LLWVAW
Trigger: CCAAGCCACCCACAGCAGCAAAGGGCTGAGGAGCGT...AGGCTGTTCAGACCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGGTAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CAA 90 bp AGACACGACATGCTTGTCCAGGACGGGAACATAGGTGGAGCTGTGCGGGACTGCACGCTCCTCAGCCCTTaGCTGCTGTGGGTGGCTTGG +
Preference number: 5 (lower is better)
Translates to: RHDMLVQDGNIGGAVRDCTLLSP*LLWVAW
Trigger: CCAAGCCACCCACAGCAGCAAAGGGCTGAGGAGCGT...GCAGTCCCGCACAGCTCCACCTATGTTCCCGTCCTGGACAAGCATGTCGTGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR CAA 90 bp GGCTTGGAGAGTACAGGGCAGGGCTGCTCGAGGTGGAGGTGTGGCAATGATGGCAGGGGAGAGGAGTCTTaGCTACAGACAGGGCAGGCA +
Preference number: 5 (lower is better)
Translates to: GLESTGQGCSRWRCGNDGRGEES*LQTGQA
Trigger: TGCCTGCCCTGTCTGTAGCAAAGACTCCTCTCCCCT...GCCATCATTGCCACACCTCCACCTCGAGCAGCCCTGCCCTGTACTCTCCAAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000489630.5
CDS-3UTR CAA 90 bp TACAGACAGGGCAGGCATAGGCGGCGCGGAGGGCGGCCTTACCTCCGCGGAGGGAGGGGATGTTCAGTCTaGCAGATCTCAGACAAGTTA +
Preference number: 5 (lower is better)
Translates to: YRQGRHRRRGGRPYLRGGRGCSV*QISDKL
Trigger: TAACTTGTCTGAGATCTGCAAGACTGAACATCCCCT...CCCTCCGCGGAGGTAAGGCCGCCCTCCGCGCCGCCTATGCCTGCCCTGTCTGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CAA 90 bp GGCAGGCATAGGCGGCGCGGAGGGCGGCCTTACCTCCGCGGAGGGGCCAGTTTCGATTTAGCTGTCAGATaGTATACTCTGCCATCTTCT +
Preference number: 5 (lower is better)
Translates to: GRHRRRGGRPYLRGGASFDLAVR*YTLPSS
Trigger: AGAAGATGGCAGAGTATACAATCTGACAGCTAAATC...GAAACTGGCCCCTCCGCGGAGGTAAGGCCGCCCTCCGCGCCGCCTATGCCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477737.6
CDS-3UTR CAA 90 bp CTCATGCTGTCTTCAGCTGTATGGAATGAAGGAAACAGCTCCAGAGCGAGAGACGTGGCCACGTCGGGCTaGGGAGGCTCGGCCACCAGC +
Preference number: 5 (lower is better)
Translates to: LMLSSAVWNEGNSSRARDVATSG*GGSATS
Trigger: GCTGGTGGCCGAGCCTCCCAAGCCCGACGTGGCCAC...GTCTCTCGCTCTGGAGCTGTTTCCTTCATTCCATACAGCTGAAGACAGCATGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422503.6
ENST00000432242.5
ENST00000433678.5
CDS-3UTR CAA 90 bp GGCGCGGAGGGCGGCCTTACCTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGCTCTCACTGTACCACTaGCACTTCTCTTTGGTAATG +
Preference number: 5 (lower is better)
Translates to: GAEGGLTSAEGPVSVSTLLSLYH*HFSLVM
Trigger: CATTACCAAAGAGAAGTGCAAGTGGTACAGTGAGAG...CAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGGTAAGGCCGCCCTCCGCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477737.6
CDS-3UTR CAA 90 bp GGAGTCTTTGCTACAGACAGGGCAGGCATAGGCGGCGCGGAGGGCGGCCTTACCGCAGGCTGGTTTTGGTaGATTCTGCGTGAAGGACTT +
Preference number: 5 (lower is better)
Translates to: GVFATDRAGIGGAEGGLTAGWFW*ILREGL
Trigger: AAGTCCTTCACGCAGAATCAACCAAAACCAGCCTGC...GGTAAGGCCGCCCTCCGCGCCGCCTATGCCTGCCCTGTCTGTAGCAAAGACTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CAA 90 bp TACAGACAGGGCAGGCATAGGCGGCGCGGAGGGCGGCCTTACCTCCGCGGAGGGGCGCTTTTCATAGGATaGAATTGCCTGTTCCACTTT +
Preference number: 5 (lower is better)
Translates to: YRQGRHRRRGGRPYLRGGALFIG*NCLFHF
Trigger: AAAGTGGAACAGGCAATTCAATCCTATGAAAAGCGC...CCCTCCGCGGAGGTAAGGCCGCCCTCCGCGCCGCCTATGCCTGCCCTGTCTGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS GCA 90 bp ACACGTGTGCACTCCACCCTGAGGCCTGGGCACCGCTGTTGTTTCTaGTTAGAACTCCCTTCCCCAATCTCATGGCTTGCCCCACCTCCT +
Preference number: 5 (lower is better)
Translates to: TRVHSTLRPGHRCCF*LELPSPISWLAPPP
Trigger: AGGAGGTGGGGCAAGCCATGAGATTGGGGAAGGGAGTTCTAAGCAGAAACAACAGCGGTGCCCAGGCCTCAGGGTGGAGTGCACACGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409460.5
CDS-3UTR CAA 90 bp ATGGAGGGGAGAGGAGTCTTTGCTACAGACAGGGCAGGCATAGGCGGCGCGGAGAAAATCTGCCGGCTCTaGCTGGTGAGCCAGTCCATT +
Preference number: 5 (lower is better)
Translates to: MEGRGVFATDRAGIGGAEKICRL*LVSQSI
Trigger: AATGGACTGGCTCACCAGCAAGAGCCGGCAGATTTT...CTCCGCGCCGCCTATGCCTGCCCTGTCTGTAGCAAAGACTCCTCTCCCCTCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000477737.6
CDS-3UTR CAA 90 bp TCAGTTTACCTCATCAAAGACCTTAGACACGACATGCTTGTCCAGGACGGGAACGTGGCCACGTCGGGCTaGGGAGGCTCGGCCACCAGC +
Preference number: 5 (lower is better)
Translates to: SVYLIKDLRHDMLVQDGNVATSG*GGSATS
Trigger: GCTGGTGGCCGAGCCTCCCAAGCCCGACGTGGCCAC...GTTCCCGTCCTGGACAAGCATGTCGTGTCTAAGGTCTTTGATGAGGTAAACTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416277.5
ENST00000448638.5
CDS-3UTR CAA 90 bp GGAGGGGAGAGGAGTCTTTGCTACAGACAGGGCAGGCATAGGCGGCGCGGAGGGCAATCTCAACAGAGGTaGTTTCTGACTCGCAGTCCA +
Preference number: 5 (lower is better)
Translates to: GGERSLCYRQGRHRRRGGQSQQR*FLTRSP
Trigger: TGGACTGCGAGTCAGAAACAACCTCTGTTGAGATTG...CCCTCCGCGCCGCCTATGCCTGCCCTGTCTGTAGCAAAGACTCCTCTCCCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000477737.6
CDS-3UTR CAA 90 bp TCTCCCGGCTTCCAGCAGAGCATCCAGGCGGCCAGCCTCGCTCACAGTCAGCTCCCGCCAAGCAACTGCTaGACCATCAAACTTCACAAA +
Preference number: 5 (lower is better)
Translates to: SPGFQQSIQAASLAHSQLPPSNC*TIKLHK
Trigger: TTTGTGAAGTTTGATGGTCAAGCAGTTGCTTGGCGG...GAGCTGACTGTGAGCGAGGCTGGCCGCCTGGATGCTCTGCTGGAAGCCGGGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422503.6
ENST00000432242.5
CDS-3UTR CAA 90 bp GCGGAGGGCGGCCTTACCTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGCGGTCAGAAGGTAGATaGCCTGTGTTTCTTTATCAG +
Preference number: 5 (lower is better)
Translates to: AEGGLTSAEGPVSVSTLRRSEGR*PVFLYQ
Trigger: CTGATAAAGAAACACAGGCAATCTACCTTCTGACCG...CCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGGTAAGGCCGCCCTCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CAA 90 bp GTCTTTGCTACAGACAGGGCAGGCATAGGCGGCGCGGAGGGCGGCCTTACCTCCACCTTTTCTGACGATTaGTCATCCAGCCACTCCTCA +
Preference number: 5 (lower is better)
Translates to: VFATDRAGIGGAEGGLTSTFSDD*SSSHSS
Trigger: TGAGGAGTGGCTGGATGACAAATCGTCAGAAAAGGT...GGAGGTAAGGCCGCCCTCCGCGCCGCCTATGCCTGCCCTGTCTGTAGCAAAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CAA 90 bp GCTTGGAGAGTACAGGGCAGGGCTGCTCGAGGTGGAGGTGTGGCAATGATGGCGTCCTTGCAATTTCTGTaGCTCTCCCGGGGCCTTGTT +
Preference number: 5 (lower is better)
Translates to: AWRVQGRAARGGGVAMMASLQFL*LSRGLV
Trigger: AACAAGGCCCCGGGAGAGCAACAGAAATTGCAAGGA...CGCCATCATTGCCACACCTCCACCTCGAGCAGCCCTGCCCTGTACTCTCCAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR CAA 90 bp CAGGGCAGGGCTGCTCGAGGTGGAGGTGTGGCAATGATGGCGTGGCTGCTGAGTGAACAGTGGCATATTTaGCAGGTCAGGTTGGGACCT +
Preference number: 5 (lower is better)
Translates to: QGRAARGGGVAMMAWLLSEQWHI*QVRLGP
Trigger: AGGTCCCAACCTGACCTGCAAAATATGCCACTGTTC...ACTCAGCAGCCACGCCATCATTGCCACACCTCCACCTCGAGCAGCCCTGCCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432242.5
CDS-3UTR CAA 90 bp ACCATTGTTAGAGCCTCTCGGCACAGATCAAGCTCCCCCTCCAGAATGCCGCCATGCTGGAGTGGCTGCTaGGCGGGCCTCTTTTTCCTC +
Preference number: 5 (lower is better)
Translates to: TIVRASRHRSSSPSRMPPCWSGC*AGLFFL
Trigger: GAGGAAAAAGAGGCCCGCCAAGCAGCCACTCCAGCA...TGGCGGCATTCTGGAGGGGGAGCTTGATCTGTGCCGAGAGGCTCTAACAATGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000432242.5
CDS-3UTR CAA 90 bp AGGAGTCTTTGCTACAGACAGGGCAGGCATAGGCGGCGCGGAGGGCGGCCTTACAACAAGATTGCGGGCTaGGATCCTGACTATGCTGAC +
Preference number: 5 (lower is better)
Translates to: RSLCYRQGRHRRRGGRPYNKIAG*DPDYAD
Trigger: GTCAGCATAGTCAGGATCCAAGCCCGCAATCTTGTT...GTAAGGCCGCCCTCCGCGCCGCCTATGCCTGCCCTGTCTGTAGCAAAGACTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS TCA 90 bp ATTCCTTCAGGGATCACATCCCCCAGGAAGTCTGGGGCAAACCTCTaGGGCCCAGCTATCCCAGTCTCATGGCCCTTCCTCCAACACACG +
Preference number: 5 (lower is better)
Translates to: IPSGITSPRKSGANL*GPAIPVSWPFLQHT
Trigger: CGTGTGTTGGAGGAAGGGCCATGAGACTGGGATAGCTGGGCCTCAGAGGTTTGCCCCAGACTTCCTGGGGGATGTGATCCCTGAAGGAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409460.5
CDS CCA 90 bp TTGCAGCTGGCTGATTCCTTCAGGGATCACATCCCCCAGGAAGTCTaGGGCAAACCTCTGAGGCCCAGCTATCCCAGTCTCATGGCCCTT +
Preference number: 5 (lower is better)
Translates to: LQLADSFRDHIPQEV*GKPLRPSYPSLMAL
Trigger: AAGGGCCATGAGACTGGGATAGCTGGGCCTCAGAGGTTTGCCCCAGACTTCCTGGGGGATGTGATCCCTGAAGGAATCAGCCAGCTGCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409460.5
CDS CCA 90 bp CTGAGTCCTAGACGCCCGGCCGCGGGGAAGTGGAGGTGGGCTGTCTaGGGAAGCAGAGTTCAGCATTACTTAAGGATGTTAGGGTCTTTG +
Preference number: 5 (lower is better)
Translates to: LSPRRPAAGKWRWAV*GSRVQHYLRMLGSL
Trigger: CAAAGACCCTAACATCCTTAAGTAATGCTGAACTCTGCTTCCCCAGACAGCCCACCTCCACTTCCCCGCGGCCGGGCGTCTAGGACTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473149.5
CDS-3UTR CAA 90 bp TCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCTGAACAGCCTGGAAGGAAAATCTGCCGGCTCTaGCTGGTGAGCCAGTCCATT +
Preference number: 5 (lower is better)
Translates to: SAEGPVSVSTLRSEQPGRKICRL*LVSQSI
Trigger: AATGGACTGGCTCACCAGCAAGAGCCGGCAGATTTT...CCTTCCAGGCTGTTCAGACCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000477737.6
CDS-3UTR CAA 90 bp CCACCAGTCCATGATCAAGGACTCAGAATAAAGGTCTTGCATCTTCTCCAGATCGTGGCCACGTCGGGCTaGGGAGGCTCGGCCACCAGC +
Preference number: 5 (lower is better)
Translates to: PPVHDQGLRIKVLHLLQIVATSG*GGSATS
Trigger: GCTGGTGGCCGAGCCTCCCAAGCCCGACGTGGCCAC...GATCTGGAGAAGATGCAAGACCTTTATTCTGAGTCCTTGATCATGGACTGGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000433678.5
ENST00000448638.5
CDS-3UTR CAA 90 bp ATAGTCTTGTCTCTCCCGGCTTCCAGCAGAGCATCCAGGCGGCCAGCCTCGCTCGGGCACTCAGGGTGTTaGTGGAGCTTCCAATCTTTA +
Preference number: 5 (lower is better)
Translates to: IVLSLPASSRASRRPASLGHSGC*WSFQSL
Trigger: TAAAGATTGGAAGCTCCACAAACACCCTGAGTGCCC...GAGCGAGGCTGGCCGCCTGGATGCTCTGCTGGAAGCCGGGAGAGACAAGACTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422503.6
ENST00000432242.5
CDS-3UTR CAA 90 bp GGAGGGCGGCCTTACCTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCCGGTCAGAAGGTAGATaGCCTGTGTTTCTTTATCAG +
Preference number: 5 (lower is better)
Translates to: GGRPYLRGGASFSVNAEVRSEGR*PVFLYQ
Trigger: CTGATAAAGAAACACAGGCAATCTACCTTCTGACCG...GACCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGGTAAGGCCGCCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CAA 90 bp GGAGGGGAGAGGAGTCTTTGCTACAGACAGGGCAGGCATAGGCGGCGCGGAGGGCGGTCAGAAGGTAGATaGCCTGTGTTTCTTTATCAG +
Preference number: 5 (lower is better)
Translates to: GGERSLCYRQGRHRRRGGRSEGR*PVFLYQ
Trigger: CTGATAAAGAAACACAGGCAATCTACCTTCTGACCG...CCCTCCGCGCCGCCTATGCCTGCCCTGTCTGTAGCAAAGACTCCTCTCCCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CAA 90 bp GAGGGCGGCCTTACCTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCTACCTTTTCTGACGATTaGTCATCCAGCCACTCCTCA +
Preference number: 5 (lower is better)
Translates to: EGGLTSAEGPVSVSTLRSTFSDD*SSSHSS
Trigger: TGAGGAGTGGCTGGATGACAAATCGTCAGAAAAGGT...AGACCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGGTAAGGCCGCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CAA 90 bp TTGGAGAGTACAGGGCAGGGCTGCTCGAGGTGGAGGTGTGGCAATGATGGCGTGCTCCCGGGGCCTTGTTaGCATAATTCTTCTTGGCAG +
Preference number: 5 (lower is better)
Translates to: LESTGQGCSRWRCGNDGVLPGPC*HNSSWQ
Trigger: CTGCCAAGAAGAATTATGCAAACAAGGCCCCGGGAG...CACGCCATCATTGCCACACCTCCACCTCGAGCAGCCCTGCCCTGTACTCTCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR CAA 90 bp TCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCTGAACAGCCTGGAAGGTCCTTGCAATTTCTGTaGCTCTCCCGGGGCCTTGTT +
Preference number: 5 (lower is better)
Translates to: SAEGPVSVSTLRSEQPGRSLQFL*LSRGLV
Trigger: AACAAGGCCCCGGGAGAGCAACAGAAATTGCAAGGA...CCTTCCAGGCTGTTCAGACCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
ENST00000495571.5
ENST00000614454.1
CDS-3UTR CAA 90 bp CTGGGCCAGCGTGCTGCAGGCTTCCTCCATCTCTTGCCAAACGAGAAACACGTCTCCAGAGCGAGAGACTaGGGCTTGAAGCTCATCCAG +
Preference number: 5 (lower is better)
Translates to: LGQRAAGFLHLLPNEKHVSRARD*GLKLIQ
Trigger: CTGGATGAGCTTCAAGCCCAAGTCTCTCGCTCTGGA...GACGTGTTTCTCGTTTGGCAAGAGATGGAGGAAGCCTGCAGCACGCTGGCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422503.6
ENST00000432242.5
CDS-3UTR CAA 90 bp TTACCTACAACAGACTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCTGAAGCCCACCAGTGCTaGGGTGCGGCTCACACACTT +
Preference number: 5 (lower is better)
Translates to: LPTTDSAEGPVSVSTLRSEAHQC*GAAHTL
Trigger: AAGTGTGTGAGCCGCACCCAAGCACTGGTGGGCTTC...AGACCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGTCTGTTGTAGGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495571.5
ENST00000614454.1
CDS-3UTR CAA 90 bp AGGAGTCTTTGCTACAGACAGGGCAGGCATAGGCGGCGCGGAGGGCGGCCTTACGTGGCCACATGCTTATaGGGAAGTGCTATGACAATG +
Preference number: 5 (lower is better)
Translates to: RSLCYRQGRHRRRGGRPYVATCL*GSAMTM
Trigger: CATTGTCATAGCACTTCCCAATAAGCATGTGGCCAC...GTAAGGCCGCCCTCCGCGCCGCCTATGCCTGCCCTGTCTGTAGCAAAGACTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CAA 90 bp CACAACCCCATCAGCGTGGCGGAAAGAGCAGTCGGCAAGCACATCATACAAGGAGACTCCAGCTCAGTCTaGTCTCTCCCGGCTTCCAGC +
Preference number: 5 (lower is better)
Translates to: HNPISVAERAVGKHIIQGDSSSV*SLPASS
Trigger: GCTGGAAGCCGGGAGAGACAAGACTGAGCTGGAGTC...TCCTTGTATGATGTGCTTGCCGACTGCTCTTTCCGCCACGCTGATGGGGTTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448638.5
CDS-3UTR CAA 90 bp GGCGCGGAGGGCGGCCTTACCTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGTTAGGTGTACTATTCTaGAAAGGGATTTCAGGGTGT +
Preference number: 5 (lower is better)
Translates to: GAEGGLTSAEGPVSVSTLLGVLF*KGISGC
Trigger: ACACCCTGAAATCCCTTTCAAGAATAGTACACCTAA...CAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGGTAAGGCCGCCCTCCGCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473149.5
CDS-3UTR CAA 90 bp ATGGAGGGGAGAGGAGTCTTTGCTACAGACAGGGCAGGCATAGGCGGCGCGGAGAGGATGTTAGGGTCTTaGCTGCACTGGAGCCTAAAC +
Preference number: 5 (lower is better)
Translates to: MEGRGVFATDRAGIGGAERMLGS*LHWSLN
Trigger: GTTTAGGCTCCAGTGCAGCAAAGACCCTAACATCCT...CTCCGCGCCGCCTATGCCTGCCCTGTCTGTAGCAAAGACTCCTCTCCCCTCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473149.5
CDS GCA 90 bp AGCCTCTGGATCTGGGCCAGCGTGCTGCAGGCTTCCTCCATCTCTTaGCAAACGAGAAACACGTCCTCTCTGACTCCAGCTCAGTCTTGT +
Preference number: 5 (lower is better)
Translates to: SLWIWASVLQASSIS*QTRNTSSLTPAQSC
Trigger: ACAAGACTGAGCTGGAGTCAGAGAGGACGTGTTTCTCGTTTGGCAAGAGATGGAGGAAGCCTGCAGCACGCTGGCCCAGATCCAGAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448638.5
CDS-3UTR CAA 90 bp GGAGTCTTTGCTACAGACAGGGCAGGCATAGGCGGCGCGGAGGGCGGCCTTACCACCTGCTGCAATATTTaGCATGGACTGTCTTCTTGT +
Preference number: 5 (lower is better)
Translates to: GVFATDRAGIGGAEGGLTTCCNI*HGLSSC
Trigger: ACAAGAAGACAGTCCATGCAAAATATTGCAGCAGGT...GGTAAGGCCGCCCTCCGCGCCGCCTATGCCTGCCCTGTCTGTAGCAAAGACTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477737.6
CDS-3UTR CAA 90 bp GCTTGGAGAGTACAGGGCAGGGCTGCTCGAGGTGGAGGTGTGGCAATGATGGCGACCTTTTCTGACGATTaGTCATCCAGCCACTCCTCA +
Preference number: 5 (lower is better)
Translates to: AWRVQGRAARGGGVAMMATFSDD*SSSHSS
Trigger: TGAGGAGTGGCTGGATGACAAATCGTCAGAAAAGGT...CGCCATCATTGCCACACCTCCACCTCGAGCAGCCCTGCCCTGTACTCTCCAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR CAA 90 bp CTCTGGATCTGGGCCAGCGTGCTGCAGGCTTCCTCCATCTCTTGCCAAACGAGACTCCCGGGGCCTTGTTaGCATAATTCTTCTTGGCAG +
Preference number: 5 (lower is better)
Translates to: LWIWASVLQASSISCQTRLPGPC*HNSSWQ
Trigger: CTGCCAAGAAGAATTATGCAAACAAGGCCCCGGGAG...TCTCGTTTGGCAAGAGATGGAGGAAGCCTGCAGCACGCTGGCCCAGATCCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432242.5
CDS-3UTR CAA 90 bp GGAGTCTTTGCTACAGACAGGGCAGGCATAGGCGGCGCGGAGGGCGGCCTTACCATAACCTTCTGTCCTTaGAGGGGATCTGGTCTTTTT +
Preference number: 5 (lower is better)
Translates to: GVFATDRAGIGGAEGGLTITFCP*RGSGLF
Trigger: AAAAAGACCAGATCCCCTCAAAGGACAGAAGGTTAT...GGTAAGGCCGCCCTCCGCGCCGCCTATGCCTGCCCTGTCTGTAGCAAAGACTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CAA 90 bp ACAGTCAGAAAAAGCCAGAACCAAGTCGTCAAACGGGTAGGGGAGGCAGCAGGGTGGGCTTCTCTCGTCTaGGCTCTCTGGAATCCTGCG +
Preference number: 5 (lower is better)
Translates to: TVRKSQNQVVKRVGEAAGWASLV*ALWNPA
Trigger: CGCAGGATTCCAGAGAGCCAAGACGAGAGAAGCCCA...CCCTGCTGCCTCCCCTACCCGTTTGACGACTTGGTTCTGGCTTTTTCTGACTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CAA 90 bp AGTCAGAAAAAGCCAGAACCAAGTCGTCAAACGGGTAGGGGAGGCAGCAGGGATTGCTGGAGTGGCTGCTaGGCGGGCCTCTTTTTCCTC +
Preference number: 5 (lower is better)
Translates to: SQKKPEPSRQTGRGGSRDCWSGC*AGLFFL
Trigger: GAGGAAAAAGAGGCCCGCCAAGCAGCCACTCCAGCA...ATCCCTGCTGCCTCCCCTACCCGTTTGACGACTTGGTTCTGGCTTTTTCTGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CAA 90 bp GGTCTGAACAGCCTGGAAGGACGCTGGTCTCTTAAACATAGCTGCCACCAGACGAGGGGAGAGGAGTCTTaGCTACAGACAGGGCAGGCA +
Preference number: 5 (lower is better)
Translates to: GLNSLEGRWSLKHSCHQTRGEES*LQTGQA
Trigger: TGCCTGCCCTGTCTGTAGCAAAGACTCCTCTCCCCT...CGTCTGGTGGCAGCTATGTTTAAGAGACCAGCGTCCTTCCAGGCTGTTCAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CAA 90 bp CGGGGCCTTGTTTGCATAATTCTTCTTGGCAGCCTCCTGGAGTTCCATGGCCTGGCTCCTGGAGAACCATaGTTAGAGCCTCTCGGCACA +
Preference number: 5 (lower is better)
Translates to: RGLVCIILLGSLLEFHGLAPGEP*LEPLGT
Trigger: TGTGCCGAGAGGCTCTAACAATGGTTCTCCAGGAGC...CAGGCCATGGAACTCCAGGAGGCTGCCAAGAAGAATTATGCAAACAAGGCCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432242.5
CDS-3UTR CAA 90 bp GGGTTAATTAATGTCATCTTATTTGTGTCGTTGCACACATGTGCCAGAGGGAACGTGGCCACGTCGGGCTaGGGAGGCTCGGCCACCAGC +
Preference number: 5 (lower is better)
Translates to: GLINVILFVSLHTCARGNVATSG*GGSATS
Trigger: GCTGGTGGCCGAGCCTCCCAAGCCCGACGTGGCCAC...GTTCCCTCTGGCACATGTGTGCAACGACACAAATAAGATGACATTAATTAACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432242.5
CDS-3UTR CAA 90 bp TCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCTGAACAGCCTGGAAGGTTCTCTTTGGTAATGTaGACGTGGACCAAGCTCCCA +
Preference number: 5 (lower is better)
Translates to: SAEGPVSVSTLRSEQPGRFSLVM*TWTKLP
Trigger: TGGGAGCTTGGTCCACGTCAACATTACCAAAGAGAA...CCTTCCAGGCTGTTCAGACCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477737.6
CDS-3UTR CAA 90 bp GAGGGCGGCCTTACCTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCTCTCAGAATAAAGGTCTaGCATCTTCTCCAGATCACT +
Preference number: 5 (lower is better)
Translates to: EGGLTSAEGPVSVSTLRSLRIKV*HLLQIT
Trigger: AGTGATCTGGAGAAGATGCAAGACCTTTATTCTGAG...AGACCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGGTAAGGCCGCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
CDS-3UTR CAA 90 bp TCCTCCGGCTGCTGGCATTGGAGAGGCCATCCTTCCTTTCACTGCAAGCTGAGCGCAGGCTGGTTTTGGTaGATTCTGCGTGAAGGACTT +
Preference number: 5 (lower is better)
Translates to: SSGCWHWRGHPSFHCKLSAGWFW*ILREGL
Trigger: AAGTCCTTCACGCAGAATCAACCAAAACCAGCCTGC...GCTCAGCTTGCAGTGAAAGGAAGGATGGCCTCTCCAATGCCAGCAGCCGGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR CAA 90 bp GGAGGGCGGCCTTACCTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCTTTCATAGGATTGAATaGCCTGTTCCACTTTTCGCT +
Preference number: 5 (lower is better)
Translates to: GGRPYLRGGASFSVNAEVFHRIE*PVPLFA
Trigger: AGCGAAAAGTGGAACAGGCAATTCAATCCTATGAAA...GACCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGGTAAGGCCGCCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CAA 90 bp GGGATGGAGGGGAGAGGAGTCTTTGCTACAGACAGGGCAGGCATAGGCGGCGCGGCGCTTTTCATAGGATaGAATTGCCTGTTCCACTTT +
Preference number: 5 (lower is better)
Translates to: GMEGRGVFATDRAGIGGAALFIG*NCLFHF
Trigger: AAAGTGGAACAGGCAATTCAATCCTATGAAAAGCGC...CGCGCCGCCTATGCCTGCCCTGTCTGTAGCAAAGACTCCTCTCCCCTCCATCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CAA 90 bp ACCATTGTTAGAGCCTCTCGGCACAGATCAAGCTCCCCCTCCAGAATGCCGCCATCCTTGCAATTTCTGTaGCTCTCCCGGGGCCTTGTT +
Preference number: 5 (lower is better)
Translates to: TIVRASRHRSSSPSRMPPSLQFL*LSRGLV
Trigger: AACAAGGCCCCGGGAGAGCAACAGAAATTGCAAGGA...TGGCGGCATTCTGGAGGGGGAGCTTGATCTGTGCCGAGAGGCTCTAACAATGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432242.5
CDS-3UTR CAA 90 bp GAGGGCGGCCTTACCTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCTGAGCGCATACTTGTTTaGGCTGATCTTAATAAGTGC +
Preference number: 5 (lower is better)
Translates to: EGGLTSAEGPVSVSTLRSERILV*ADLNKC
Trigger: GCACTTATTAAGATCAGCCAAAACAAGTATGCGCTC...AGACCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGGTAAGGCCGCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CAA 90 bp TTTCGGGCTCAATTAGAGTTACCTACAACAGACTCCGCGGAGGGGCCAGTTTCATGCTGGAGTGGCTGCTaGGCGGGCCTCTTTTTCCTC +
Preference number: 5 (lower is better)
Translates to: FRAQLELPTTDSAEGPVSCWSGC*AGLFFL
Trigger: GAGGAAAAAGAGGCCCGCCAAGCAGCCACTCCAGCA...TGAAACTGGCCCCTCCGCGGAGTCTGTTGTAGGTAACTCTAATTGAGCCCGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000495571.5
ENST00000614454.1
CDS-3UTR CAA 90 bp CAGAGGGAACACCTCATCAAAGACCTTAGACACGACATGCTTGTCCAGGACGGGAGGGGAGAGGAGTCTTaGCTACAGACAGGGCAGGCA +
Preference number: 5 (lower is better)
Translates to: QREHLIKDLRHDMLVQDGRGEES*LQTGQA
Trigger: TGCCTGCCCTGTCTGTAGCAAAGACTCCTCTCCCCT...CCCGTCCTGGACAAGCATGTCGTGTCTAAGGTCTTTGATGAGGTGTTCCCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000489630.5
CDS-3UTR CAA 90 bp CTGGGCCAGCGTGCTGCAGGCTTCCTCCATCTCTTGCCAAACGAGAAACACGTCAATCTGCTGTGGGTCTaGGCACTCAGATCCTTTAGA +
Preference number: 5 (lower is better)
Translates to: LGQRAAGFLHLLPNEKHVNLLWV*ALRSFR
Trigger: TCTAAAGGATCTGAGTGCCAAGACCCACAGCAGATT...GACGTGTTTCTCGTTTGGCAAGAGATGGAGGAAGCCTGCAGCACGCTGGCCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422503.6
ENST00000432242.5
CDS-3UTR CAA 90 bp CTTACCTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCTGAACAGCCTCCATCCTTTTCTGCATaGTACCACCAGTCCATGATC +
Preference number: 5 (lower is better)
Translates to: LTSAEGPVSVSTLRSEQPPSFSA*YHQSMI
Trigger: GATCATGGACTGGTGGTACAATGCAGAAAAGGATGG...AGGCTGTTCAGACCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGGTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
CDS-3UTR CAA 90 bp AGGAGTCTTTGCTACAGACAGGGCAGGCATAGGCGGCGCGGAGGGCGGCCTTACTTTCATAGGATTGAATaGCCTGTTCCACTTTTCGCT +
Preference number: 5 (lower is better)
Translates to: RSLCYRQGRHRRRGGRPYFHRIE*PVPLFA
Trigger: AGCGAAAAGTGGAACAGGCAATTCAATCCTATGAAA...GTAAGGCCGCCCTCCGCGCCGCCTATGCCTGCCCTGTCTGTAGCAAAGACTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CAA 90 bp TTATATCCACAACCCCATCAGCGTGGCGGAAAGAGCAGTCGGCAAGCACATCATGCGAGAGACTTGGGCTaGAAGCTCATCCAGCACTGC +
Preference number: 5 (lower is better)
Translates to: LYPQPHQRGGKSSRQAHHARDLG*KLIQHC
Trigger: GCAGTGCTGGATGAGCTTCAAGCCCAAGTCTCTCGC...ATGATGTGCTTGCCGACTGCTCTTTCCGCCACGCTGATGGGGTTGTGGATATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422503.6
ENST00000432242.5
CDS-3UTR CAA 90 bp AAAGAGTCAGATCTTCATTCTGAACAGCCTCTGGGGGAGTGGGATCCTTGCAACGAAGCCCACCAGTGCTaGGGTGCGGCTCACACACTT +
Preference number: 5 (lower is better)
Translates to: KESDLHSEQPLGEWDPCNEAHQC*GAAHTL
Trigger: AAGTGTGTGAGCCGCACCCAAGCACTGGTGGGCTTC...GTTGCAAGGATCCCACTCCCCCAGAGGCTGTTCAGAATGAAGATCTGACTCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000495571.5
CDS-3UTR CAA 90 bp ACAGACTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCTGAACAGCCTGTGGCCACATGCTTATaGGGAAGTGCTATGACAATG +
Preference number: 5 (lower is better)
Translates to: TDSAEGPVSVSTLRSEQPVATCL*GSAMTM
Trigger: CATTGTCATAGCACTTCCCAATAAGCATGTGGCCAC...AGGCTGTTCAGACCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495571.5
ENST00000614454.1
CDS-3UTR CAA 90 bp AGGAGTCTTTGCTACAGACAGGGCAGGCATAGGCGGCGCGGAGGGCGGCCTTACCAAAATTCTCTCCGGTaGTTACACTTCAAAACTGTG +
Preference number: 5 (lower is better)
Translates to: RSLCYRQGRHRRRGGRPYQNSLR*LHFKTV
Trigger: CACAGTTTTGAAGTGTAACAACCGGAGAGAATTTTG...GTAAGGCCGCCCTCCGCGCCGCCTATGCCTGCCCTGTCTGTAGCAAAGACTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CAA 90 bp CACCAGACGGCCTTAAAGTGTCTCAGGGACGCTCCTCAGCCCTTTGCTGCTGTGCTGGATCCTCAGGAATaGGGGGTGACTTTATATGAG +
Preference number: 5 (lower is better)
Translates to: HQTALKCLRDAPQPFAAVLDPQE*GVTLYE
Trigger: CTCATATAAAGTCACCCCCAATTCCTGAGGATCCAG...CACAGCAGCAAAGGGCTGAGGAGCGTCCCTGAGACACTTTAAGGCCGTCTGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR CAA 90 bp ACAGACTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCTGAACAGCCTCTGGATCCTCAGGAATaGGGGGTGACTTTATATGAG +
Preference number: 5 (lower is better)
Translates to: TDSAEGPVSVSTLRSEQPLDPQE*GVTLYE
Trigger: CTCATATAAAGTCACCCCCAATTCCTGAGGATCCAG...AGGCTGTTCAGACCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGTCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000495571.5
ENST00000614454.1
CDS-3UTR CAA 90 bp TCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCTGAACAGCCTGGAAGGAGGGGATGTTCAGTCTaGCAGATCTCAGACAAGTTA +
Preference number: 5 (lower is better)
Translates to: SAEGPVSVSTLRSEQPGRRGCSV*QISDKL
Trigger: TAACTTGTCTGAGATCTGCAAGACTGAACATCCCCT...CCTTCCAGGCTGTTCAGACCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CAA 90 bp CCTACAACAGACTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCTGAAGATAGTAGCTCAGATTaGGCTTGTGTGCACCCACTC +
Preference number: 5 (lower is better)
Translates to: PTTDSAEGPVSVSTLRSEDSSSD*ACVHPL
Trigger: GAGTGGGTGCACACAAGCCAAATCTGAGCTACTATC...TTCAGACCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGTCTGTTGTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614454.1
CDS CCA 90 bp GACACATCTGAAGAACTTTGTCACTTAGAGCAGTCCTCCGGCTGCTaGCATTGGAGAGGCCATCCTTCCTTTCACTGCAAGCTGAGCTCC +
Preference number: 5 (lower is better)
Translates to: DTSEELCHLEQSSGC*HWRGHPSFHCKLSS
Trigger: GGAGCTCAGCTTGCAGTGAAAGGAAGGATGGCCTCTCCAATGCCAGCAGCCGGAGGACTGCTCTAAGTGACAAAGTTCTTCAGATGTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485216.1
CDS-3UTR CAA 90 bp ACAGTCAGAAAAAGCCAGAACCAAGTCGTCAAACGGGTAGGGGAGGCAGCAGGGTGGAGGAGAAGCTCCTaGGATTCTTCAGGAACATCC +
Preference number: 5 (lower is better)
Translates to: TVRKSQNQVVKRVGEAAGWRRSS*DSSGTS
Trigger: GGATGTTCCTGAAGAATCCAAGGAGCTTCTCCTCCA...CCCTGCTGCCTCCCCTACCCGTTTGACGACTTGGTTCTGGCTTTTTCTGACTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000477737.6
CDS-3UTR CAA 90 bp TTGGCTTTTATATCCACAACCCCATCAGCGTGGCGGAAAGAGCAGTCGGCAAGCGGCTTCCTCCATCTCTaGCCAAACGAGAAACACGTC +
Preference number: 5 (lower is better)
Translates to: LAFISTTPSAWRKEQSASGFLHL*PNEKHV
Trigger: GACGTGTTTCTCGTTTGGCAAGAGATGGAGGAAGCC...GCTTGCCGACTGCTCTTTCCGCCACGCTGATGGGGTTGTGGATATAAAAGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000422503.6
ENST00000432242.5
ENST00000448638.5
CDS-3UTR CAA 90 bp TCTTTGGTAATGTTGACGTGGACCAAGCTCCCATCCTTCCAGGGAGCATGGACAGCATGGACTGTCTTCTaGTTCGTCTCCGCACTGGTC +
Preference number: 5 (lower is better)
Translates to: SLVMLTWTKLPSFQGAWTAWTVF*FVSALV
Trigger: GACCAGTGCGGAGACGAACAAGAAGACAGTCCATGC...TGTCCATGCTCCCTGGAAGGATGGGAGCTTGGTCCACGTCAACATTACCAAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422503.6
CDS-3UTR CAA 90 bp CATAGCTGCCACCAGACGGCCTTAAAGTGTCTCAGGGACGCTCCTCAGCCCTTTCCGCCAAGCAACTGCTaGACCATCAAACTTCACAAA +
Preference number: 5 (lower is better)
Translates to: HSCHQTALKCLRDAPQPFPPSNC*TIKLHK
Trigger: TTTGTGAAGTTTGATGGTCAAGCAGTTGCTTGGCGG...AAAGGGCTGAGGAGCGTCCCTGAGACACTTTAAGGCCGTCTGGTGGCAGCTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000495571.5
CDS-3UTR CAA 90 bp ATGGAGGGGAGAGGAGTCTTTGCTACAGACAGGGCAGGCATAGGCGGCGCGGAGGAGATGAAGTTTGTGTaGAATCGACATCAGATTGAG +
Preference number: 5 (lower is better)
Translates to: MEGRGVFATDRAGIGGAEEMKFV*NRHQIE
Trigger: CTCAATCTGATGTCGATTCAACACAAACTTCATCTC...CTCCGCGCCGCCTATGCCTGCCCTGTCTGTAGCAAAGACTCCTCTCCCCTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CAA 90 bp CCCCACAGGCGTGATGAAGGAGGTGGACACGACCTTGGTGTCTCCGTAACTGAAACCTTTTCTGACGATTaGTCATCCAGCCACTCCTCA +
Preference number: 5 (lower is better)
Translates to: PHRRDEGGGHDLGVSVTETFSDD*SSSHSS
Trigger: TGAGGAGTGGCTGGATGACAAATCGTCAGAAAAGGT...TTCAGTTACGGAGACACCAAGGTCGTGTCCACCTCCTTCATCACGCCTGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR CAA 90 bp TCTTGTCTCTCCCGGCTTCCAGCAGAGCATCCAGGCGGCCAGCCTCGCTCACAGTTAATGTCATCTTATTaGTGTCGTTGCACACATGTG +
Preference number: 5 (lower is better)
Translates to: SCLSRLPAEHPGGQPRSQLMSSY*CRCTHV
Trigger: CACATGTGTGCAACGACACAAATAAGATGACATTAA...CTGTGAGCGAGGCTGGCCGCCTGGATGCTCTGCTGGAAGCCGGGAGAGACAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432242.5
CDS-3UTR CAA 90 bp CAGGGCAGGGCTGCTCGAGGTGGAGGTGTGGCAATGATGGCGTGGCTGCTGAGTTTAATGTCATCTTATTaGTGTCGTTGCACACATGTG +
Preference number: 5 (lower is better)
Translates to: QGRAARGGGVAMMAWLLSLMSSY*CRCTHV
Trigger: CACATGTGTGCAACGACACAAATAAGATGACATTAA...ACTCAGCAGCCACGCCATCATTGCCACACCTCCACCTCGAGCAGCCCTGCCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR CAA 90 bp GTTTCGGGCTCAATTAGAGTTACCTACAACAGACTCCGCGGAGGGGCCAGTTTCCTCCCGGGGCCTTGTTaGCATAATTCTTCTTGGCAG +
Preference number: 5 (lower is better)
Translates to: VSGSIRVTYNRLRGGASFLPGPC*HNSSWQ
Trigger: CTGCCAAGAAGAATTATGCAAACAAGGCCCCGGGAG...GAAACTGGCCCCTCCGCGGAGTCTGTTGTAGGTAACTCTAATTGAGCCCGAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495571.5
ENST00000614454.1
CDS-3UTR CAA 90 bp GCTTGGAGAGTACAGGGCAGGGCTGCTCGAGGTGGAGGTGTGGCAATGATGGCGCAAAATTCTCTCCGGTaGTTACACTTCAAAACTGTG +
Preference number: 5 (lower is better)
Translates to: AWRVQGRAARGGGVAMMAQNSLR*LHFKTV
Trigger: CACAGTTTTGAAGTGTAACAACCGGAGAGAATTTTG...CGCCATCATTGCCACACCTCCACCTCGAGCAGCCCTGCCCTGTACTCTCCAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR CAA 90 bp AAGCCCACCAGTGCTTGGGTGCGGCTCACACACTTCTTCACAACCCCTGGAAAAAACAAGATTGCGGGCTaGGATCCTGACTATGCTGAC +
Preference number: 5 (lower is better)
Translates to: KPTSAWVRLTHFFTTPGKNKIAG*DPDYAD
Trigger: GTCAGCATAGTCAGGATCCAAGCCCGCAATCTTGTT...TTTTCCAGGGGTTGTGAAGAAGTGTGTGAGCCGCACCCAAGCACTGGTGGGCTT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000489630.5
CDS GCA 90 bp TCACCATCCATGAAACTCCCTTCATACCTCCACCCCTTGCTGAATTaGAGCTGGCTGATTCCTTCAGGGATCACATCCCCCAGGAAGTCT +
Preference number: 5 (lower is better)
Translates to: SPSMKLPSYLHPLLN*SWLIPSGITSPRKS
Trigger: AGACTTCCTGGGGGATGTGATCCCTGAAGGAATCAGCCAGCTGCAATTCAGCAAGGGGTGGAGGTATGAAGGGAGTTTCATGGATGGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409460.5
CDS GCA 90 bp GAAGACACATCTGAAGAACTTTGTCACTTAGAGCAGTCCTCCGGCTaGTGGCATTGGAGAGGCCATCCTTCCTTTCACTGCAAGCTGAGC +
Preference number: 5 (lower is better)
Translates to: EDTSEELCHLEQSSG*WHWRGHPSFHCKLS
Trigger: GCTCAGCTTGCAGTGAAAGGAAGGATGGCCTCTCCAATGCCAGCAGCCGGAGGACTGCTCTAAGTGACAAAGTTCTTCAGATGTGTCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485216.1
CDS CCA 90 bp CCTTTCGTGGCCATTGTGTGCTTCAGTGTGATAGTAGCTCAGATTTaGCTTGTGTGCACCCACTCTCCGTCCTCTCCACATGCAGATCCA +
Preference number: 5 (lower is better)
Translates to: PFVAIVCFSVIVAQI*LVCTHSPSSPHADP
Trigger: TGGATCTGCATGTGGAGAGGACGGAGAGTGGGTGCACACAAGCCAAATCTGAGCTACTATCACACTGAAGCACACAATGGCCACGAAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490947.2
ENST00000614454.1
CDS-3UTR CAA 90 bp TTATATCCACAACCCCATCAGCGTGGCGGAAAGAGCAGTCGGCAAGCACATCATAAAATCTGCCGGCTCTaGCTGGTGAGCCAGTCCATT +
Preference number: 5 (lower is better)
Translates to: LYPQPHQRGGKSSRQAHHKICRL*LVSQSI
Trigger: AATGGACTGGCTCACCAGCAAGAGCCGGCAGATTTT...ATGATGTGCTTGCCGACTGCTCTTTCCGCCACGCTGATGGGGTTGTGGATATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
CDS-3UTR CAA 90 bp CTCATGCTGTCTTCAGCTGTATGGAATGAAGGAAACAGCTCCAGAGCGAGAGACGCTCCTGGAGAACCATaGTTAGAGCCTCTCGGCACA +
Preference number: 5 (lower is better)
Translates to: LMLSSAVWNEGNSSRARDAPGEP*LEPLGT
Trigger: TGTGCCGAGAGGCTCTAACAATGGTTCTCCAGGAGC...GTCTCTCGCTCTGGAGCTGTTTCCTTCATTCCATACAGCTGAAGACAGCATGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000433678.5
CDS-3UTR CAA 90 bp CCAGAAGAGGAAAGCAGAGTTCCTCGCCTCCACATCCTCTACTTCTGGATCCTCATGGATTCAATAGTCTaGTCTCTCCCGGCTTCCAGC +
Preference number: 5 (lower is better)
Translates to: PEEESRVPRLHILYFWILMDSIV*SLPASS
Trigger: GCTGGAAGCCGGGAGAGACAAGACTATTGAATCCAT...GAGGATCCAGAAGTAGAGGATGTGGAGGCGAGGAACTCTGCTTTCCTCTTCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432242.5
CDS-3UTR CAA 90 bp ATGGAGGGGAGAGGAGTCTTTGCTACAGACAGGGCAGGCATAGGCGGCGCGGAGTTCCTTTCAGTTTCCTaGAATTCCAAGTCATCACAT +
Preference number: 5 (lower is better)
Translates to: MEGRGVFATDRAGIGGAEFLSVS*NSKSSH
Trigger: ATGTGATGACTTGGAATTCAAGGAAACTGAAAGGAA...CTCCGCGCCGCCTATGCCTGCCCTGTCTGTAGCAAAGACTCCTCTCCCCTCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000477737.6
CDS-3UTR CAA 90 bp GACCTTAGACACGACATGCTTGTCCAGGACGGGAACATAGGTGGAGCTGTGCGGCGGTCAGAAGGTAGATaGCCTGTGTTTCTTTATCAG +
Preference number: 5 (lower is better)
Translates to: DLRHDMLVQDGNIGGAVRRSEGR*PVFLYQ
Trigger: CTGATAAAGAAACACAGGCAATCTACCTTCTGACCG...CCGCACAGCTCCACCTATGTTCCCGTCCTGGACAAGCATGTCGTGTCTAAGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR CAA 90 bp CTCGTCTTGGCTCTCTGGAATCCTGCGTGTCCGCTTCTTTCAGTGGCCAGAAGACCATCCTTTTCTGCATaGTACCACCAGTCCATGATC +
Preference number: 5 (lower is better)
Translates to: LVLALWNPACPLLSVARRPSFSA*YHQSMI
Trigger: GATCATGGACTGGTGGTACAATGCAGAAAAGGATGG...TCTTCTGGCCACTGAAAGAAGCGGACACGCAGGATTCCAGAGAGCCAAGACGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000495571.5
CDS-3UTR CAA 90 bp AGACACGACATGCTTGTCCAGGACGGGAACATAGGTGGAGCTGTGCGGGACTGCAGAACAGATTTCCTTTaGATGCTTGCTGTCTCCATC +
Preference number: 5 (lower is better)
Translates to: RHDMLVQDGNIGGAVRDCRTDFL*MLAVSI
Trigger: GATGGAGACAGCAAGCATCAAAAGGAAATCTGTTCT...GCAGTCCCGCACAGCTCCACCTATGTTCCCGTCCTGGACAAGCATGTCGTGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
ENST00000495571.5
CDS-3UTR CAA 90 bp GCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCTGAACAGCCTGGAAGGACGGAGATGAAGTTTGTGTaGAATCGACATCAGATTGAG +
Preference number: 5 (lower is better)
Translates to: AEGPVSVSTLRSEQPGRTEMKFV*NRHQIE
Trigger: CTCAATCTGATGTCGATTCAACACAAACTTCATCTC...CGTCCTTCCAGGCTGTTCAGACCTCAGCGTTGACACTGAAACTGGCCCCTCCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
ENST00000495571.5
CDS-3UTR CAA 90 bp CACCAGACGGCCTTAAAGTGTCTCAGGGACGCTCCTCAGCCCTTTGCTGCTGTGAAGATGCTCATTTCTTaGTCACTTAGAGCAGTCCTC +
Preference number: 5 (lower is better)
Translates to: HQTALKCLRDAPQPFAAVKMLIS*SLRAVL
Trigger: GAGGACTGCTCTAAGTGACAAAGAAATGAGCATCTT...CACAGCAGCAAAGGGCTGAGGAGCGTCCCTGAGACACTTTAAGGCCGTCTGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR CAA 90 bp TCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCTGAACAGCCTGGAAGGTTTCATAGGATTGAATaGCCTGTTCCACTTTTCGCT +
Preference number: 5 (lower is better)
Translates to: SAEGPVSVSTLRSEQPGRFHRIE*PVPLFA
Trigger: AGCGAAAAGTGGAACAGGCAATTCAATCCTATGAAA...CCTTCCAGGCTGTTCAGACCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
ENST00000495571.5
ENST00000614454.1
CDS-3UTR CAA 90 bp GACTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCTGAACAGCCTGGATTTCATAGGATTGAATaGCCTGTTCCACTTTTCGCT +
Preference number: 5 (lower is better)
Translates to: DSAEGPVSVSTLRSEQPGFHRIE*PVPLFA
Trigger: AGCGAAAAGTGGAACAGGCAATTCAATCCTATGAAA...TCCAGGCTGTTCAGACCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495571.5
ENST00000614454.1
CDS-3UTR CAA 90 bp TCCTCCGGCTGCTGGCATTGGAGAGGCCATCCTTCCTTTCACTGCAAGCTGAGCATAACCTTCTGTCCTTaGAGGGGATCTGGTCTTTTT +
Preference number: 5 (lower is better)
Translates to: SSGCWHWRGHPSFHCKLSITFCP*RGSGLF
Trigger: AAAAAGACCAGATCCCCTCAAAGGACAGAAGGTTAT...GCTCAGCTTGCAGTGAAAGGAAGGATGGCCTCTCCAATGCCAGCAGCCGGAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR CAA 90 bp CGGGGCCTTGTTTGCATAATTCTTCTTGGCAGCCTCCTGGAGTTCCATGGCCTGGTGGCCACATGCTTATaGGGAAGTGCTATGACAATG +
Preference number: 5 (lower is better)
Translates to: RGLVCIILLGSLLEFHGLVATCL*GSAMTM
Trigger: CATTGTCATAGCACTTCCCAATAAGCATGTGGCCAC...CAGGCCATGGAACTCCAGGAGGCTGCCAAGAAGAATTATGCAAACAAGGCCCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR CAA 90 bp TCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGAGGTCTGAACAGCCTGGAAGGCAAAATTCTCTCCGGTaGTTACACTTCAAAACTGTG +
Preference number: 5 (lower is better)
Translates to: SAEGPVSVSTLRSEQPGRQNSLR*LHFKTV
Trigger: CACAGTTTTGAAGTGTAACAACCGGAGAGAATTTTG...CCTTCCAGGCTGTTCAGACCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
ENST00000495571.5
ENST00000614454.1
CDS-3UTR CAA 90 bp GCTCTCCCGGGGCCTTGTTTGCATAATTCTTCTTGGCAGCCTCCTGGAGTTCCACTGGATCCTCAGGAATaGGGGGTGACTTTATATGAG +
Preference number: 5 (lower is better)
Translates to: ALPGPCLHNSSWQPPGVPLDPQE*GVTLYE
Trigger: CTCATATAAAGTCACCCCCAATTCCTGAGGATCCAG...TGGAACTCCAGGAGGCTGCCAAGAAGAATTATGCAAACAAGGCCCCGGGAGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR CAA 90 bp GGTCTGAACAGCCTGGAAGGACGCTGGTCTCTTAAACATAGCTGCCACCAGACGCTGGATCCTCAGGAATaGGGGGTGACTTTATATGAG +
Preference number: 5 (lower is better)
Translates to: GLNSLEGRWSLKHSCHQTLDPQE*GVTLYE
Trigger: CTCATATAAAGTCACCCCCAATTCCTGAGGATCCAG...CGTCTGGTGGCAGCTATGTTTAAGAGACCAGCGTCCTTCCAGGCTGTTCAGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
ENST00000495571.5
ENST00000614454.1
CDS-3UTR CAA 90 bp TTTATTCTGGTTTCGGGCTCAATTAGAGTTACCTACAACAGACTCCGCGGAGGGTGGGCTTCTCTCGTCTaGGCTCTCTGGAATCCTGCG +
Preference number: 5 (lower is better)
Translates to: FILVSGSIRVTYNRLRGGWASLV*ALWNPA
Trigger: CGCAGGATTCCAGAGAGCCAAGACGAGAGAAGCCCA...CCCTCCGCGGAGTCTGTTGTAGGTAACTCTAATTGAGCCCGAAACCAGAATAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495571.5
ENST00000614454.1
CDS-3UTR CAA 90 bp ACACATCTGAAGAATCGTGGTCATAAACCTGGCTTCCTTCTCGCGTCACCTTTTTGCTGGAGTGGCTGCTaGGCGGGCCTCTTTTTCCTC +
Preference number: 5 (lower is better)
Translates to: THLKNRGHKPGFLLASPFCWSGC*AGLFFL
Trigger: GAGGAAAAAGAGGCCCGCCAAGCAGCCACTCCAGCA...AAAAGGTGACGCGAGAAGGAAGCCAGGTTTATGACCACGATTCTTCAGATGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR CAA 90 bp GGATGTTCAGTCTTGCAGATCTCAGACAAGTTACCGAGTCTGAATTTCAGTCCTACGCTCCTCAGCCCTTaGCTGCTGTGGGTGGCTTGG +
Preference number: 5 (lower is better)
Translates to: GCSVLQISDKLPSLNFSPTLLSP*LLWVAW
Trigger: CCAAGCCACCCACAGCAGCAAAGGGCTGAGGAGCGT...AGGACTGAAATTCAGACTCGGTAACTTGTCTGAGATCTGCAAGACTGAACATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CAA 90 bp GGTCTGAACAGCCTGGAAGGACGCTGGTCTCTTAAACATAGCTGCCACCAGACGGAGGGAACACCTCTTTaGTGGATTTCAACCTCATGC +
Preference number: 5 (lower is better)
Translates to: GLNSLEGRWSLKHSCHQTEGTPL*WISTSC
Trigger: GCATGAGGTTGAAATCCACAAAAGAGGTGTTCCCTC...CGTCTGGTGGCAGCTATGTTTAAGAGACCAGCGTCCTTCCAGGCTGTTCAGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614454.1
CDS GCA 90 bp TGCTCAGCCAAGTCTGTTTTGGTGTTAATCCATCCCTCTTGCCTCTaGAGCTGCTGCTCAGAGATGGTAGAAGATGGGCCTGATTTCTCC +
Preference number: 5 (lower is better)
Translates to: CSAKSVLVLIHPSCL*SCCSEMVEDGPDFS
Trigger: GGAGAAATCAGGCCCATCTTCTACCATCTCTGAGCAGCAGCTGCAGAGGCAAGAGGGATGGATTAACACCAAAACAGACTTGGCTGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000409460.5
ENST00000416277.5
ENST00000422503.6
ENST00000432242.5
ENST00000433678.5
ENST00000448079.5
ENST00000448638.5
ENST00000477737.6
ENST00000483669.5
ENST00000484571.5
CDS GCA 90 bp AGACTCTGCTCAGCCAAGTCTGTTTTGGTGTTAATCCATCCCTCTTaGCTCTGCAGCTGCTGCTCAGAGATGGTAGAAGATGGGCCTGAT +
Preference number: 5 (lower is better)
Translates to: RLCSAKSVLVLIHPS*LCSCCSEMVEDGPD
Trigger: ATCAGGCCCATCTTCTACCATCTCTGAGCAGCAGCTGCAGAGGCAAGAGGGATGGATTAACACCAAAACAGACTTGGCTGAGCAGAGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000409460.5
ENST00000416277.5
ENST00000422503.6
ENST00000432242.5
ENST00000433678.5
ENST00000448079.5
ENST00000448638.5
ENST00000477737.6
ENST00000483669.5
ENST00000484571.5
CDS GCA 90 bp GCCATTGTGTGCTTCAGTGTGATAGTAGCTCAGATTTGGCTTGTGTaGACCCACTCTCCGTCCTCTCCACATGCAGATCCAGGGAAAGAT +
Preference number: 5 (lower is better)
Translates to: AIVCFSVIVAQIWLV*THSPSSPHADPGKD
Trigger: ATCTTTCCCTGGATCTGCATGTGGAGAGGACGGAGAGTGGGTGCACACAAGCCAAATCTGAGCTACTATCACACTGAAGCACACAATGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490947.2
ENST00000614454.1
CDS-3UTR CAA 90 bp TGTGTAGACTGGACACGGGATCTCCAAGGCCCTCTGGAGGAGAAGCTCCTTGGATGTTTCAAGGTCAATTaGTTGCTCTTAAGCCCATGC +
Preference number: 5 (lower is better)
Translates to: CVDWTRDLQGPLEEKLLGCFKVN*LLLSPC
Trigger: GCATGGGCTTAAGAGCAACAAATTGACCTTGAAACA...TCCAAGGAGCTTCTCCTCCAGAGGGCCTTGGAGATCCCGTGTCCAGTCTACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422503.6
ENST00000432242.5
CDS-3UTR CAA 90 bp CTCATGCTGTCTTCAGCTGTATGGAATGAAGGAAACAGCTCCAGAGCGAGAGACAAAATCTGCCGGCTCTaGCTGGTGAGCCAGTCCATT +
Preference number: 5 (lower is better)
Translates to: LMLSSAVWNEGNSSRARDKICRL*LVSQSI
Trigger: AATGGACTGGCTCACCAGCAAGAGCCGGCAGATTTT...GTCTCTCGCTCTGGAGCTGTTTCCTTCATTCCATACAGCTGAAGACAGCATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000433678.5
CDS-3UTR CAA 90 bp TGTCATCCAGCCACTCCTCAGCCAGCAAGATGCTCATTTCTTTGTCACTTAGAGGCTCCTGGAGAACCATaGTTAGAGCCTCTCGGCACA +
Preference number: 5 (lower is better)
Translates to: CHPATPQPARCSFLCHLEAPGEP*LEPLGT
Trigger: TGTGCCGAGAGGCTCTAACAATGGTTCTCCAGGAGC...CTCTAAGTGACAAAGAAATGAGCATCTTGCTGGCTGAGGAGTGGCTGGATGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
CDS-3UTR CAA 90 bp ACAACCCCATCAGCGTGGCGGAAAGAGCAGTCGGCAAGCACATCATACAAGGATAATCTGCTGTGGGTCTaGGCACTCAGATCCTTTAGA +
Preference number: 5 (lower is better)
Translates to: TTPSAWRKEQSASTSYKDNLLWV*ALRSFR
Trigger: TCTAAAGGATCTGAGTGCCAAGACCCACAGCAGATT...ATCCTTGTATGATGTGCTTGCCGACTGCTCTTTCCGCCACGCTGATGGGGTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000422503.6
ENST00000432242.5
CDS-3UTR CAA 90 bp CACAACCCCATCAGCGTGGCGGAAAGAGCAGTCGGCAAGCACATCATACAAGGATTCCAAGTCATCACATaGTCACCATCCTTTGTGGAG +
Preference number: 5 (lower is better)
Translates to: HNPISVAERAVGKHIIQGFQVIT*SPSFVE
Trigger: CTCCACAAAGGATGGTGACAATGTGATGACTTGGAA...TCCTTGTATGATGTGCTTGCCGACTGCTCTTTCCGCCACGCTGATGGGGTTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000422503.6
ENST00000432242.5
CDS-3UTR CAA 90 bp TCCCGGGGCCTTGTTTGCATAATTCTTCTTGGCAGCCTCCTGGAGTTCCATGGCTTCCAAGTCATCACATaGTCACCATCCTTTGTGGAG +
Preference number: 5 (lower is better)
Translates to: SRGLVCIILLGSLLEFHGFQVIT*SPSFVE
Trigger: CTCCACAAAGGATGGTGACAATGTGATGACTTGGAA...GCCATGGAACTCCAGGAGGCTGCCAAGAAGAATTATGCAAACAAGGCCCCGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432242.5
CDS-3UTR CAA 90 bp TTTGACCTGGTCTATAACTGTTTCAGGTGGCTGATCAGGTCTCCCATCGGTCAGGGCTTCCTCCATCTCTaGCCAAACGAGAAACACGTC +
Preference number: 5 (lower is better)
Translates to: FDLVYNCFRWLIRSPIGQGFLHL*PNEKHV
Trigger: GACGTGTTTCTCGTTTGGCAAGAGATGGAGGAAGCC...CTGACCGATGGGAGACCTGATCAGCCACCTGAAACAGTTATAGACCAGGTCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416277.5
ENST00000448638.5
CDS-3UTR CAA 90 bp CTTCTCTCGTCTTGGCTCTCTGGAATCCTGCGTGTCCGCTTCTTTCAGTGGCCAGACTCATTCTCCGGTTaGGCTTTTATATCCACAACC +
Preference number: 5 (lower is better)
Translates to: LLSSWLSGILRVRFFQWPDSFSG*AFISTT
Trigger: GGTTGTGGATATAAAAGCCAAACCGGAGAATGAGTC...TGGCCACTGAAAGAAGCGGACACGCAGGATTCCAGAGAGCCAAGACGAGAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432242.5
CDS-3UTR CAA 90 bp TTGGCTTTTATATCCACAACCCCATCAGCGTGGCGGAAAGAGCAGTCGGCAAGCTTCTCTTTGGTAATGTaGACGTGGACCAAGCTCCCA +
Preference number: 5 (lower is better)
Translates to: LAFISTTPSAWRKEQSASFSLVM*TWTKLP
Trigger: TGGGAGCTTGGTCCACGTCAACATTACCAAAGAGAA...GCTTGCCGACTGCTCTTTCCGCCACGCTGATGGGGTTGTGGATATAAAAGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422503.6
CDS-3UTR CAA 90 bp TCCGGTTTGGCTTTTATATCCACAACCCCATCAGCGTGGCGGAAAGAGCAGTCGCCGCCAAGCAACTGCTaGACCATCAAACTTCACAAA +
Preference number: 5 (lower is better)
Translates to: SGLAFISTTPSAWRKEQSPPSNC*TIKLHK
Trigger: TTTGTGAAGTTTGATGGTCAAGCAGTTGCTTGGCGG...CGACTGCTCTTTCCGCCACGCTGATGGGGTTGTGGATATAAAAGCCAAACCGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000422503.6
ENST00000432242.5
ENST00000448638.5
CDS-3UTR CAA 90 bp CACAACCCCATCAGCGTGGCGGAAAGAGCAGTCGGCAAGCACATCATACAAGGACGGTCAGAAGGTAGATaGCCTGTGTTTCTTTATCAG +
Preference number: 5 (lower is better)
Translates to: HNPISVAERAVGKHIIQGRSEGR*PVFLYQ
Trigger: CTGATAAAGAAACACAGGCAATCTACCTTCTGACCG...TCCTTGTATGATGTGCTTGCCGACTGCTCTTTCCGCCACGCTGATGGGGTTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000422503.6
ENST00000432242.5
ENST00000448638.5
CDS-3UTR CAA 90 bp AGTCAGAAAAAGCCAGAACCAAGTCGTCAAACGGGTAGGGGAGGCAGCAGGGATATCTTATTTGTGTCGTaGCACACATGTGCCAGAGGG +
Preference number: 5 (lower is better)
Translates to: SQKKPEPSRQTGRGGSRDILFVS*HTCARG
Trigger: CCCTCTGGCACATGTGTGCAACGACACAAATAAGAT...ATCCCTGCTGCCTCCCCTACCCGTTTGACGACTTGGTTCTGGCTTTTTCTGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CAA 90 bp TCAACAGAGGTTGTTTCTGACTCGCAGTCCACAGTGGCCACGTCGGGCTTGGGAGCTCTTGAGAAACCATaGTATACTCTGCCATCTTCT +
Preference number: 5 (lower is better)
Translates to: STEVVSDSQSTVATSGLGALEKP*YTLPSS
Trigger: AGAAGATGGCAGAGTATACAATGGTTTCTCAAGAGC...TCCCAAGCCCGACGTGGCCACTGTGGACTGCGAGTCAGAAACAACCTCTGTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422503.6
CDS-3UTR CAA 90 bp AGATTGCGGGCTTGGATCCTGACTATGCTGACTGCTAAACAATTTGAAAGTCCTGAAGCCCACCAGTGCTaGGGTGCGGCTCACACACTT +
Preference number: 5 (lower is better)
Translates to: RLRAWILTMLTAKQFESPEAHQC*GAAHTL
Trigger: AAGTGTGTGAGCCGCACCCAAGCACTGGTGGGCTTC...AGGACTTTCAAATTGTTTAGCAGTCAGCATAGTCAGGATCCAAGCCCGCAATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CAA 90 bp CACCAGACGGCCTTAAAGTGTCTCAGGGACGCTCCTCAGCCCTTTGCTGCTGTGCAAGAGAGCGCATACTaGTTTTGGCTGATCTTAATA +
Preference number: 5 (lower is better)
Translates to: HQTALKCLRDAPQPFAAVQESAY*FWLILI
Trigger: TATTAAGATCAGCCAAAACAAGTATGCGCTCTCTTG...CACAGCAGCAAAGGGCTGAGGAGCGTCCCTGAGACACTTTAAGGCCGTCTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR CAA 90 bp AGGGGATGTTCAGTCTTGCAGATCTCAGACAAGTTACCGAGTCTGAATTTCAGTTGCTGGAGTGGCTGCTaGGCGGGCCTCTTTTTCCTC +
Preference number: 5 (lower is better)
Translates to: RGCSVLQISDKLPSLNFSCWSGC*AGLFFL
Trigger: GAGGAAAAAGAGGCCCGCCAAGCAGCCACTCCAGCA...ACTGAAATTCAGACTCGGTAACTTGTCTGAGATCTGCAAGACTGAACATCCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CAA 90 bp CCACCAGTCCATGATCAAGGACTCAGAATAAAGGTCTTGCATCTTCTCCAGATCAGGGGAGAGGAGTCTTaGCTACAGACAGGGCAGGCA +
Preference number: 5 (lower is better)
Translates to: PPVHDQGLRIKVLHLLQIRGEES*LQTGQA
Trigger: TGCCTGCCCTGTCTGTAGCAAAGACTCCTCTCCCCT...GATCTGGAGAAGATGCAAGACCTTTATTCTGAGTCCTTGATCATGGACTGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432242.5
CDS-3UTR CAA 90 bp TCCCGGGGCCTTGTTTGCATAATTCTTCTTGGCAGCCTCCTGGAGTTCCATGGCAGGGGATGTTCAGTCTaGCAGATCTCAGACAAGTTA +
Preference number: 5 (lower is better)
Translates to: SRGLVCIILLGSLLEFHGRGCSV*QISDKL
Trigger: TAACTTGTCTGAGATCTGCAAGACTGAACATCCCCT...GCCATGGAACTCCAGGAGGCTGCCAAGAAGAATTATGCAAACAAGGCCCCGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000489630.5
CDS TCA 90 bp GGGACAAGCCAGCATATCACACAAGCAGAAAACTATTTTTCCAGATaGCTCGAAACTTGGAACAGCACCGCAGTCCACAGTGGCCACGTC +
Preference number: 5 (lower is better)
Translates to: GTSQHITQAENYFSR*LETWNSTAVHSGHV
Trigger: GACGTGGCCACTGTGGACTGCGGTGCTGTTCCAAGTTTCGAGTCATCTGGAAAAATAGTTTTCTGCTTGTGTGATATGCTGGCTTGTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416277.5
CDS GCA 90 bp GCCAAGTCTGTTTTGGTGTTAATCCATCCCTCTTGCCTCTGCAGCTaGTGCTCAGAGATGGTAGAAGATGGGCCTGATTTCTCCATCTCT +
Preference number: 5 (lower is better)
Translates to: AKSVLVLIHPSCLCS*CSEMVEDGPDFSIS
Trigger: AGAGATGGAGAAATCAGGCCCATCTTCTACCATCTCTGAGCAGCAGCTGCAGAGGCAAGAGGGATGGATTAACACCAAAACAGACTTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000409460.5
ENST00000416277.5
ENST00000422503.6
ENST00000432242.5
ENST00000433678.5
ENST00000448079.5
ENST00000448638.5
ENST00000477737.6
ENST00000483669.5
ENST00000484571.5
CDS-3UTR CAA 90 bp AGTCAGAAAAAGCCAGAACCAAGTCGTCAAACGGGTAGGGGAGGCAGCAGGGATTCAGCCAAGTCTGTTTaGGTGTTAATCCATCCCTCT +
Preference number: 5 (lower is better)
Translates to: SQKKPEPSRQTGRGGSRDSAKSV*VLIHPS
Trigger: AGAGGGATGGATTAACACCAAAACAGACTTGGCTGA...ATCCCTGCTGCCTCCCCTACCCGTTTGACGACTTGGTTCTGGCTTTTTCTGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000477737.6
CDS-3UTR CAA 90 bp TCCGGTTTGGCTTTTATATCCACAACCCCATCAGCGTGGCGGAAAGAGCAGTCGCCACTTCACAGGCTCTaGAGAAACCCGTATGATATT +
Preference number: 5 (lower is better)
Translates to: SGLAFISTTPSAWRKEQSPLHRL*RNPYDI
Trigger: AATATCATACGGGTTTCTCAAGAGCCTGTGAAGTGG...CGACTGCTCTTTCCGCCACGCTGATGGGGTTGTGGATATAAAAGCCAAACCGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
CDS-3UTR CAA 90 bp AGTCAGAAAAAGCCAGAACCAAGTCGTCAAACGGGTAGGGGAGGCAGCAGGGATTTCCAAGTCATCACATaGTCACCATCCTTTGTGGAG +
Preference number: 5 (lower is better)
Translates to: SQKKPEPSRQTGRGGSRDFQVIT*SPSFVE
Trigger: CTCCACAAAGGATGGTGACAATGTGATGACTTGGAA...ATCCCTGCTGCCTCCCCTACCCGTTTGACGACTTGGTTCTGGCTTTTTCTGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000477737.6
CDS-3UTR CAA 90 bp CTCTGGATCTGGGCCAGCGTGCTGCAGGCTTCCTCCATCTCTTGCCAAACGAGATTCCTTTCAGTTTCCTaGAATTCCAAGTCATCACAT +
Preference number: 5 (lower is better)
Translates to: LWIWASVLQASSISCQTRFLSVS*NSKSSH
Trigger: ATGTGATGACTTGGAATTCAAGGAAACTGAAAGGAA...TCTCGTTTGGCAAGAGATGGAGGAAGCCTGCAGCACGCTGGCCCAGATCCAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422503.6
ENST00000432242.5
CDS-3UTR CAA 90 bp CTTCTTGTTCGTCTCCGCACTGGTCTGCACGGACTCATTCTCCGGTTTGGCTTTGACTCATTCTCCGGTTaGGCTTTTATATCCACAACC +
Preference number: 5 (lower is better)
Translates to: LLVRLRTGLHGLILRFGFDSFSG*AFISTT
Trigger: GGTTGTGGATATAAAAGCCAAACCGGAGAATGAGTC...AAAGCCAAACCGGAGAATGAGTCCGTGCAGACCAGTGCGGAGACGAACAAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422503.6
CDS-3UTR CAA 90 bp CTGGTTTCGGGCTCAATTAGAGTTACCTACAACAGACTCCGCGGAGGGGCCAGTAAGATGCTCATTTCTTaGTCACTTAGAGCAGTCCTC +
Preference number: 5 (lower is better)
Translates to: LVSGSIRVTYNRLRGGASKMLIS*SLRAVL
Trigger: GAGGACTGCTCTAAGTGACAAAGAAATGAGCATCTT...ACTGGCCCCTCCGCGGAGTCTGTTGTAGGTAACTCTAATTGAGCCCGAAACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495571.5
CDS-3UTR CAA 90 bp GCTGTATGGAATGAAGGAAACAGCTCCAGAGCGAGAGACTTGGGCTTGAAGCTCACCTTTTCTGACGATTaGTCATCCAGCCACTCCTCA +
Preference number: 5 (lower is better)
Translates to: AVWNEGNSSRARDLGLKLTFSDD*SSSHSS
Trigger: TGAGGAGTGGCTGGATGACAAATCGTCAGAAAAGGT...GAGCTTCAAGCCCAAGTCTCTCGCTCTGGAGCTGTTTCCTTCATTCCATACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000495571.5
CDS-3UTR CAA 90 bp GGTCTGAACAGCCTGGAAGGACGCTGGTCTCTTAAACATAGCTGCCACCAGACGGCGCTTTTCATAGGATaGAATTGCCTGTTCCACTTT +
Preference number: 5 (lower is better)
Translates to: GLNSLEGRWSLKHSCHQTALFIG*NCLFHF
Trigger: AAAGTGGAACAGGCAATTCAATCCTATGAAAAGCGC...CGTCTGGTGGCAGCTATGTTTAAGAGACCAGCGTCCTTCCAGGCTGTTCAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
ENST00000495571.5
ENST00000614454.1
CDS-3UTR CAA 90 bp GGTCTGAACAGCCTGGAAGGACGCTGGTCTCTTAAACATAGCTGCCACCAGACGATAACCTTCTGTCCTTaGAGGGGATCTGGTCTTTTT +
Preference number: 5 (lower is better)
Translates to: GLNSLEGRWSLKHSCHQTITFCP*RGSGLF
Trigger: AAAAAGACCAGATCCCCTCAAAGGACAGAAGGTTAT...CGTCTGGTGGCAGCTATGTTTAAGAGACCAGCGTCCTTCCAGGCTGTTCAGACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
ENST00000495571.5
ENST00000614454.1
CDS-3UTR CAA 90 bp AGATGCAATCATTATGCAATCTTCCAAAGAGGCTTTGACTCCCATCCTGTAGCCGCGAGAGACTTGGGCTaGAAGCTCATCCAGCACTGC +
Preference number: 5 (lower is better)
Translates to: RCNHYAIFQRGFDSHPVAARDLG*KLIQHC
Trigger: GCAGTGCTGGATGAGCTTCAAGCCCAAGTCTCTCGC...GGCTACAGGATGGGAGTCAAAGCCTCTTTGGAAGATTGCATAATGATTGCATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422503.6
ENST00000432242.5
CDS-3UTR CAA 90 bp TCAAGGACTCAGAATAAAGGTCTTGCATCTTCTCCAGATCACTGTGACCCTGTTGCGAGAGACTTGGGCTaGAAGCTCATCCAGCACTGC +
Preference number: 5 (lower is better)
Translates to: SRTQNKGLASSPDHCDPVARDLG*KLIQHC
Trigger: GCAGTGCTGGATGAGCTTCAAGCCCAAGTCTCTCGC...AACAGGGTCACAGTGATCTGGAGAAGATGCAAGACCTTTATTCTGAGTCCTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000433678.5
ENST00000495571.5
CDS-3UTR CAA 90 bp CTTTCAGTGGCCAGAAGAGGAAAGCAGAGTTCCTCGCCTCCACATCCTCTACTTGTGGCCACATGCTTATaGGGAAGTGCTATGACAATG +
Preference number: 5 (lower is better)
Translates to: LSVARRGKQSSSPPHPLLVATCL*GSAMTM
Trigger: CATTGTCATAGCACTTCCCAATAAGCATGTGGCCAC...AAGTAGAGGATGTGGAGGCGAGGAACTCTGCTTTCCTCTTCTGGCCACTGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR CAA 90 bp CGGGGCCTTGTTTGCATAATTCTTCTTGGCAGCCTCCTGGAGTTCCATGGCCTGGAGCGCATACTTGTTTaGGCTGATCTTAATAAGTGC +
Preference number: 5 (lower is better)
Translates to: RGLVCIILLGSLLEFHGLERILV*ADLNKC
Trigger: GCACTTATTAAGATCAGCCAAAACAAGTATGCGCTC...CAGGCCATGGAACTCCAGGAGGCTGCCAAGAAGAATTATGCAAACAAGGCCCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR CAA 90 bp AACTATACAGTAGGGGATGTTCAGTCTTGCAGATCTCAGACAAGTTACCGAGTCTGGGCTTCTCTCGTCTaGGCTCTCTGGAATCCTGCG +
Preference number: 5 (lower is better)
Translates to: NYTVGDVQSCRSQTSYRVWASLV*ALWNPA
Trigger: CGCAGGATTCCAGAGAGCCAAGACGAGAGAAGCCCA...GACTCGGTAACTTGTCTGAGATCTGCAAGACTGAACATCCCCTACTGTATAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CAA 90 bp TTATATCCACAACCCCATCAGCGTGGCGGAAAGAGCAGTCGGCAAGCACATCATTCAGCCAAGTCTGTTTaGGTGTTAATCCATCCCTCT +
Preference number: 5 (lower is better)
Translates to: LYPQPHQRGGKSSRQAHHSAKSV*VLIHPS
Trigger: AGAGGGATGGATTAACACCAAAACAGACTTGGCTGA...ATGATGTGCTTGCCGACTGCTCTTTCCGCCACGCTGATGGGGTTGTGGATATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000422503.6
ENST00000432242.5
ENST00000448638.5
CDS-3UTR CAA 90 bp TCAGTTTACCTCATCAAAGACCTTAGACACGACATGCTTGTCCAGGACGGGAACATGGATTCAATAGTCTaGTCTCTCCCGGCTTCCAGC +
Preference number: 5 (lower is better)
Translates to: SVYLIKDLRHDMLVQDGNMDSIV*SLPASS
Trigger: GCTGGAAGCCGGGAGAGACAAGACTATTGAATCCAT...GTTCCCGTCCTGGACAAGCATGTCGTGTCTAAGGTCTTTGATGAGGTAAACTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416277.5
CDS-3UTR CAA 90 bp TCTGGATTCGATGCAATCTCAACAGAGGTTGTTTCTGACTCGCAGTCCACAGTGTGGAGGAGAAGCTCCTaGGATTCTTCAGGAACATCC +
Preference number: 5 (lower is better)
Translates to: SGFDAISTEVVSDSQSTVWRRSS*DSSGTS
Trigger: GGATGTTCCTGAAGAATCCAAGGAGCTTCTCCTCCA...CACTGTGGACTGCGAGTCAGAAACAACCTCTGTTGAGATTGCATCGAATCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422503.6
ENST00000432242.5
CDS-3UTR CAA 90 bp CAAGGACTCAGAATAAAGGTCTTGCATCTTCTCCAGATCACTGTGACCCTGTTCGGCTTCCTCCATCTCTaGCCAAACGAGAAACACGTC +
Preference number: 5 (lower is better)
Translates to: QGLRIKVLHLLQITVTLFGFLHL*PNEKHV
Trigger: GACGTGTTTCTCGTTTGGCAAGAGATGGAGGAAGCC...GAACAGGGTCACAGTGATCTGGAGAAGATGCAAGACCTTTATTCTGAGTCCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000433678.5
ENST00000448638.5
CDS-3UTR CAA 90 bp AGTCAGAAAAAGCCAGAACCAAGTCGTCAAACGGGTAGGGGAGGCAGCAGGGATCTCAGAATAAAGGTCTaGCATCTTCTCCAGATCACT +
Preference number: 5 (lower is better)
Translates to: SQKKPEPSRQTGRGGSRDLRIKV*HLLQIT
Trigger: AGTGATCTGGAGAAGATGCAAGACCTTTATTCTGAG...ATCCCTGCTGCCTCCCCTACCCGTTTGACGACTTGGTTCTGGCTTTTTCTGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
CDS-3UTR CAA 90 bp TGGCCAGAAGAGGAAAGCAGAGTTCCTCGCCTCCACATCCTCTACTTCTGGATCAGAACAGATTTCCTTTaGATGCTTGCTGTCTCCATC +
Preference number: 5 (lower is better)
Translates to: WPEEESRVPRLHILYFWIRTDFL*MLAVSI
Trigger: GATGGAGACAGCAAGCATCAAAAGGAAATCTGTTCT...GATCCAGAAGTAGAGGATGTGGAGGCGAGGAACTCTGCTTTCCTCTTCTGGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000495571.5
CDS-3UTR CAA 90 bp AGTCAGAAAAAGCCAGAACCAAGTCGTCAAACGGGTAGGGGAGGCAGCAGGGATAGAACAGATTTCCTTTaGATGCTTGCTGTCTCCATC +
Preference number: 5 (lower is better)
Translates to: SQKKPEPSRQTGRGGSRDRTDFL*MLAVSI
Trigger: GATGGAGACAGCAAGCATCAAAAGGAAATCTGTTCT...ATCCCTGCTGCCTCCCCTACCCGTTTGACGACTTGGTTCTGGCTTTTTCTGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
CDS-3UTR CAA 90 bp CTTCTCTCGTCTTGGCTCTCTGGAATCCTGCGTGTCCGCTTCTTTCAGTGGCCAGAGATGAAGTTTGTGTaGAATCGACATCAGATTGAG +
Preference number: 5 (lower is better)
Translates to: LLSSWLSGILRVRFFQWPEMKFV*NRHQIE
Trigger: CTCAATCTGATGTCGATTCAACACAAACTTCATCTC...TGGCCACTGAAAGAAGCGGACACGCAGGATTCCAGAGAGCCAAGACGAGAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR CAA 90 bp GCTCTCCCGGGGCCTTGTTTGCATAATTCTTCTTGGCAGCCTCCTGGAGTTCCAGAGATGAAGTTTGTGTaGAATCGACATCAGATTGAG +
Preference number: 5 (lower is better)
Translates to: ALPGPCLHNSSWQPPGVPEMKFV*NRHQIE
Trigger: CTCAATCTGATGTCGATTCAACACAAACTTCATCTC...TGGAACTCCAGGAGGCTGCCAAGAAGAATTATGCAAACAAGGCCCCGGGAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR CAA 90 bp CTGAAGACACATCTGAAGAATCGTGGTCATAAACCTGGCTTCCTTCTCGCGTCAGCAGGCTGGTTTTGGTaGATTCTGCGTGAAGGACTT +
Preference number: 5 (lower is better)
Translates to: LKTHLKNRGHKPGFLLASAGWFW*ILREGL
Trigger: AAGTCCTTCACGCAGAATCAACCAAAACCAGCCTGC...TGACGCGAGAAGGAAGCCAGGTTTATGACCACGATTCTTCAGATGTGTCTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR CAA 90 bp ACAACCCCATCAGCGTGGCGGAAAGAGCAGTCGGCAAGCACATCATACAAGGATAAGATGCTCATTTCTTaGTCACTTAGAGCAGTCCTC +
Preference number: 5 (lower is better)
Translates to: TTPSAWRKEQSASTSYKDKMLIS*SLRAVL
Trigger: GAGGACTGCTCTAAGTGACAAAGAAATGAGCATCTT...ATCCTTGTATGATGTGCTTGCCGACTGCTCTTTCCGCCACGCTGATGGGGTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
CDS-3UTR CAA 90 bp CTGAAGACACATCTGAAGAATCGTGGTCATAAACCTGGCTTCCTTCTCGCGTCACAATCTCAACAGAGGTaGTTTCTGACTCTGAGCGGG +
Preference number: 5 (lower is better)
Translates to: LKTHLKNRGHKPGFLLASQSQQR*FLTLSG
Trigger: CCCGCTCAGAGTCAGAAACAACCTCTGTTGAGATTG...TGACGCGAGAAGGAAGCCAGGTTTATGACCACGATTCTTCAGATGTGTCTTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416277.5
CDS-3UTR CAA 90 bp TATATCCACAACCCCATCAGCGTGGCGGAAAGAGCAGTCGGCAAGCACATCATACCACTTCACAGGCTCTaGAGAAACCATTGTATACTC +
Preference number: 5 (lower is better)
Translates to: YIHNPISVAERAVGKHIIPLHRL*RNHCIL
Trigger: GAGTATACAATGGTTTCTCAAGAGCCTGTGAAGTGG...TATGATGTGCTTGCCGACTGCTCTTTCCGCCACGCTGATGGGGTTGTGGATATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422503.6
CDS-3UTR CAA 90 bp TCAAGGACTCAGAATAAAGGTCTTGCATCTTCTCCAGATCACTGTGACCCTGTTTCCAGAGCGAGAGACTaGGGCTTGAAGCTCATCCAG +
Preference number: 5 (lower is better)
Translates to: SRTQNKGLASSPDHCDPVSRARD*GLKLIQ
Trigger: CTGGATGAGCTTCAAGCCCAAGTCTCTCGCTCTGGA...AACAGGGTCACAGTGATCTGGAGAAGATGCAAGACCTTTATTCTGAGTCCTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000433678.5
ENST00000495571.5
CDS-3UTR CAA 90 bp ATTTCTGTTGCTCTCCCGGGGCCTTGTTTGCATAATTCTTCTTGGCAGCCTCCTATTTTGCAGGTCAGGTaGGGACCTCTGAGAACAGAA +
Preference number: 5 (lower is better)
Translates to: ISVALPGPCLHNSSWQPPILQVR*GPLRTE
Trigger: TTCTGTTCTCAGAGGTCCCAACCTGACCTGCAAAAT...AGGAGGCTGCCAAGAAGAATTATGCAAACAAGGCCCCGGGAGAGCAACAGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432242.5
CDS-3UTR CAA 90 bp ATTTTCCCAGCTAGGATTTCACTTTCCAGCATCGACAGCTCTTTCAGTGAAATGTGGGCTTCTCTCGTCTaGGCTCTCTGGAATCCTGCG +
Preference number: 5 (lower is better)
Translates to: IFPARISLSSIDSSFSEMWASLV*ALWNPA
Trigger: CGCAGGATTCCAGAGAGCCAAGACGAGAGAAGCCCA...CATTTCACTGAAAGAGCTGTCGATGCTGGAAAGTGAAATCCTAGCTGGGAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS TCA 90 bp TCCCTAAGCCAAGGAAGTATATGTCCACAGATTTTTGGTGGCAGCTaGAAAGGTCCCCCAGACCCATTTCCAGCATTTGCTTTCAGAGCA +
Preference number: 5 (lower is better)
Translates to: SLSQGSICPQIFGGS*KGPPDPFPAFAFRA
Trigger: TGCTCTGAAAGCAAATGCTGGAAATGGGTCTGGGGGACCTTTTCAGCTGCCACCAAAAATCTGTGGACATATACTTCCTTGGCTTAGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000466852.1
CDS GCA 90 bp AAGTCTGTTTTGGTGTTAATCCATCCCTCTTGCCTCTGCAGCTGCTaGTCAGAGATGGTAGAAGATGGGCCTGATTTCTCCATCTCTGAA +
Preference number: 5 (lower is better)
Translates to: KSVLVLIHPSCLCSC*SEMVEDGPDFSISE
Trigger: TTCAGAGATGGAGAAATCAGGCCCATCTTCTACCATCTCTGAGCAGCAGCTGCAGAGGCAAGAGGGATGGATTAACACCAAAACAGACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000409460.5
ENST00000416277.5
ENST00000422503.6
ENST00000432242.5
ENST00000433678.5
ENST00000448079.5
ENST00000448638.5
ENST00000477737.6
ENST00000483669.5
ENST00000484571.5
CDS GCA 90 bp CCCCCACCACAAAGTAGTAAATGGATTCAATCTGCAAAACAGTGGTaGCAACGGTTTATCTCCCTCACATGCCCTAGCTTGGTACTAGTC +
Preference number: 5 (lower is better)
Translates to: PPPQSSKWIQSAKQW*QRFISLTCPSLVLV
Trigger: GACTAGTACCAAGCTAGGGCATGTGAGGGAGATAAACCGTTGGCACCACTGTTTTGCAGATTGAATCCATTTACTACTTTGTGGTGGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465930.1
CDS GCA 90 bp ACCTCTTTTGTGGATTTCAACCTCATGCCTTTCGTGGCCATTGTGTaGTTCAGTGTGATAGTAGCTCAGATTTGGCTTGTGTGCACCCAC +
Preference number: 5 (lower is better)
Translates to: TSFVDFNLMPFVAIV*FSVIVAQIWLVCTH
Trigger: GTGGGTGCACACAAGCCAAATCTGAGCTACTATCACACTGAAGCACACAATGGCCACGAAAGGCATGAGGTTGAAATCCACAAAAGAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490947.2
ENST00000614454.1
CDS-3UTR CAA 90 bp GCTGTATGGAATGAAGGAAACAGCTCCAGAGCGAGAGACTTGGGCTTGAAGCTCTGTTTCAAGGTCAATTaGTTGCTCTTAAGCCCATGC +
Preference number: 5 (lower is better)
Translates to: AVWNEGNSSRARDLGLKLCFKVN*LLLSPC
Trigger: GCATGGGCTTAAGAGCAACAAATTGACCTTGAAACA...GAGCTTCAAGCCCAAGTCTCTCGCTCTGGAGCTGTTTCCTTCATTCCATACAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422503.6
ENST00000432242.5
ENST00000433678.5
CDS-3UTR CAA 90 bp GAATGCAGGAAATTCTACACACTCTGTTCTCTCGGCAAATGCGTGGAATCTGCTATGGATTCAATAGTCTaGTCTCTCCCGGCTTCCAGC +
Preference number: 5 (lower is better)
Translates to: ECRKFYTLCSLGKCVESAMDSIV*SLPASS
Trigger: GCTGGAAGCCGGGAGAGACAAGACTATTGAATCCAT...AGCAGATTCCACGCATTTGCCGAGAGAACAGAGTGTGTAGAATTTCCTGCATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422503.6
ENST00000432242.5
CDS-3UTR CAA 90 bp TTGTCATCCAGCCACTCCTCAGCCAGCAAGATGCTCATTTCTTTGTCACTTAGATGGAGGAGAAGCTCCTaGGATTCTTCAGGAACATCC +
Preference number: 5 (lower is better)
Translates to: LSSSHSSASKMLISLSLRWRRSS*DSSGTS
Trigger: GGATGTTCCTGAAGAATCCAAGGAGCTTCTCCTCCA...TCTAAGTGACAAAGAAATGAGCATCTTGCTGGCTGAGGAGTGGCTGGATGACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416277.5
ENST00000432242.5
CDS-3UTR CAA 90 bp CCACTCATGCTGTCTTCAGCTGTATGGAATGAAGGAAACAGCTCCAGAGCGAGATTCCAAGTCATCACATaGTCACCATCCTTTGTGGAG +
Preference number: 5 (lower is better)
Translates to: PLMLSSAVWNEGNSSRARFQVIT*SPSFVE
Trigger: CTCCACAAAGGATGGTGACAATGTGATGACTTGGAA...TCTCGCTCTGGAGCTGTTTCCTTCATTCCATACAGCTGAAGACAGCATGAGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422503.6
ENST00000432242.5
ENST00000433678.5
CDS-3UTR CAA 90 bp AACTATACAGTAGGGGATGTTCAGTCTTGCAGATCTCAGACAAGTTACCGAGTCGGCTTCCTCCATCTCTaGCCAAACGAGAAACACGTC +
Preference number: 5 (lower is better)
Translates to: NYTVGDVQSCRSQTSYRVGFLHL*PNEKHV
Trigger: GACGTGTTTCTCGTTTGGCAAGAGATGGAGGAAGCC...GACTCGGTAACTTGTCTGAGATCTGCAAGACTGAACATCCCCTACTGTATAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000477737.6
CDS-3UTR CAA 90 bp ACGTTTGACCTGGTCTATAACTGTTTCAGGTGGAATGATACACATGACAGTCTCGCATGGACTGTCTTCTaGTTCGTCTCCGCACTGGTC +
Preference number: 5 (lower is better)
Translates to: TFDLVYNCFRWNDTHDSLAWTVF*FVSALV
Trigger: GACCAGTGCGGAGACGAACAAGAAGACAGTCCATGC...GAGACTGTCATGTGTATCATTCCACCTGAAACAGTTATAGACCAGGTCAAACGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433678.5
CDS-3UTR CAA 90 bp AAAGAGCAGTCGGCAAGCACATCATACAAGGATAGCTTCTGGGCCTTCAAGCCACTCTCACTGTACCACTaGCACTTCTCTTTGGTAATG +
Preference number: 5 (lower is better)
Translates to: KEQSASTSYKDSFWAFKPLSLYH*HFSLVM
Trigger: CATTACCAAAGAGAAGTGCAAGTGGTACAGTGAGAG...TGGCTTGAAGGCCCAGAAGCTATCCTTGTATGATGTGCTTGCCGACTGCTCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422503.6
CDS-3UTR CAA 90 bp CACAACCCCATCAGCGTGGCGGAAAGAGCAGTCGGCAAGCACATCATACAAGGATCCAAATTATCTTCATaGACTTCAGCAAGTTGTTCC +
Preference number: 5 (lower is better)
Translates to: HNPISVAERAVGKHIIQGSKLSS*TSASCS
Trigger: GGAACAACTTGCTGAAGTCAATGAAGATAATTTGGA...TCCTTGTATGATGTGCTTGCCGACTGCTCTTTCCGCCACGCTGATGGGGTTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000422503.6
ENST00000432242.5
ENST00000448638.5
CDS-3UTR CAA 90 bp AAGCCCACCAGTGCTTGGGTGCGGCTCACACACTTCTTCACAACCCCTGGAAAATCCAAATTATCTTCATaGACTTCAGCAAGTTGTTCC +
Preference number: 5 (lower is better)
Translates to: KPTSAWVRLTHFFTTPGKSKLSS*TSASCS
Trigger: GGAACAACTTGCTGAAGTCAATGAAGATAATTTGGA...TTTTCCAGGGGTTGTGAAGAAGTGTGTGAGCCGCACCCAAGCACTGGTGGGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000495571.5
CDS-3UTR CAA 90 bp CTCATGCTGTCTTCAGCTGTATGGAATGAAGGAAACAGCTCCAGAGCGAGAGACCGGTCAGAAGGTAGATaGCCTGTGTTTCTTTATCAG +
Preference number: 5 (lower is better)
Translates to: LMLSSAVWNEGNSSRARDRSEGR*PVFLYQ
Trigger: CTGATAAAGAAACACAGGCAATCTACCTTCTGACCG...GTCTCTCGCTCTGGAGCTGTTTCCTTCATTCCATACAGCTGAAGACAGCATGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000422503.6
ENST00000432242.5
ENST00000433678.5
ENST00000495571.5
CDS-3UTR CAA 90 bp GCTGTATGGAATGAAGGAAACAGCTCCAGAGCGAGAGACTTGGGCTTGAAGCTCCTCAGAATAAAGGTCTaGCATCTTCTCCAGATCACT +
Preference number: 5 (lower is better)
Translates to: AVWNEGNSSRARDLGLKLLRIKV*HLLQIT
Trigger: AGTGATCTGGAGAAGATGCAAGACCTTTATTCTGAG...GAGCTTCAAGCCCAAGTCTCTCGCTCTGGAGCTGTTTCCTTCATTCCATACAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000433678.5
ENST00000495571.5
CDS-3UTR CAA 90 bp ATTAGAGTTACCTACAACAGACTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTCTCAGAATAAAGGTCTaGCATCTTCTCCAGATCACT +
Preference number: 5 (lower is better)
Translates to: IRVTYNRLRGGASFSVNALRIKV*HLLQIT
Trigger: AGTGATCTGGAGAAGATGCAAGACCTTTATTCTGAG...AGCGTTGACACTGAAACTGGCCCCTCCGCGGAGTCTGTTGTAGGTAACTCTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495571.5
CDS-3UTR CAA 90 bp GATCCTCAGGAATTGGGGGTGACTTTATATGAGAGCAAGAGAGCGCATACTTGTGCAGGCTGGTTTTGGTaGATTCTGCGTGAAGGACTT +
Preference number: 5 (lower is better)
Translates to: DPQELGVTLYESKRAHTCAGWFW*ILREGL
Trigger: AAGTCCTTCACGCAGAATCAACCAAAACCAGCCTGC...ACAAGTATGCGCTCTCTTGCTCTCATATAAAGTCACCCCCAATTCCTGAGGATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR CAA 90 bp TGTCATCCAGCCACTCCTCAGCCAGCAAGATGCTCATTTCTTTGTCACTTAGAGACCTTTTCTGACGATTaGTCATCCAGCCACTCCTCA +
Preference number: 5 (lower is better)
Translates to: CHPATPQPARCSFLCHLETFSDD*SSSHSS
Trigger: TGAGGAGTGGCTGGATGACAAATCGTCAGAAAAGGT...CTCTAAGTGACAAAGAAATGAGCATCTTGCTGGCTGAGGAGTGGCTGGATGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR CAA 90 bp ATTAGAGTTACCTACAACAGACTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTGCGCTTTTCATAGGATaGAATTGCCTGTTCCACTTT +
Preference number: 5 (lower is better)
Translates to: IRVTYNRLRGGASFSVNAALFIG*NCLFHF
Trigger: AAAGTGGAACAGGCAATTCAATCCTATGAAAAGCGC...AGCGTTGACACTGAAACTGGCCCCTCCGCGGAGTCTGTTGTAGGTAACTCTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495571.5
ENST00000614454.1
CDS-3UTR CAA 90 bp AGATTGCGGGCTTGGATCCTGACTATGCTGACTGCTAAACAATTTGAAAGTCCTCTCCCGGGGCCTTGTTaGCATAATTCTTCTTGGCAG +
Preference number: 5 (lower is better)
Translates to: RLRAWILTMLTAKQFESPLPGPC*HNSSWQ
Trigger: CTGCCAAGAAGAATTATGCAAACAAGGCCCCGGGAG...AGGACTTTCAAATTGTTTAGCAGTCAGCATAGTCAGGATCCAAGCCCGCAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CAA 90 bp CTTTTCTGCATTGTACCACCAGTCCATGATCAAGGACTCAGAATAAAGGTCTTGTCCAGAGCGAGAGACTaGGGCTTGAAGCTCATCCAG +
Preference number: 5 (lower is better)
Translates to: LFCIVPPVHDQGLRIKVLSRARD*GLKLIQ
Trigger: CTGGATGAGCTTCAAGCCCAAGTCTCTCGCTCTGGA...CAAGACCTTTATTCTGAGTCCTTGATCATGGACTGGTGGTACAATGCAGAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000433678.5
ENST00000495571.5
CDS-3UTR CAA 90 bp AGTCAGAAAAAGCCAGAACCAAGTCGTCAAACGGGTAGGGGAGGCAGCAGGGATCAAAATTCTCTCCGGTaGTTACACTTCAAAACTGTG +
Preference number: 5 (lower is better)
Translates to: SQKKPEPSRQTGRGGSRDQNSLR*LHFKTV
Trigger: CACAGTTTTGAAGTGTAACAACCGGAGAGAATTTTG...ATCCCTGCTGCCTCCCCTACCCGTTTGACGACTTGGTTCTGGCTTTTTCTGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS TCA 90 bp ATGTTAGGGTCTTTGCTGCACTGGAGCCTAAACAGGCCCAGAATCTaGAGGACGATGTTAGGTGTACTATTCTTGAAAGGGATTTCAGGG +
Preference number: 5 (lower is better)
Translates to: MLGSLLHWSLNRPRI*RTMLGVLFLKGISG
Trigger: CCCTGAAATCCCTTTCAAGAATAGTACACCTAACATCGTCCTTCAGATTCTGGGCCTGTTTAGGCTCCAGTGCAGCAAAGACCCTAACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473149.5
CDS CCA 90 bp CATCCCCCACCACAAAGTAGTAAATGGATTCAATCTGCAAAACAGTaGTGCCAACGGTTTATCTCCCTCACATGCCCTAGCTTGGTACTA +
Preference number: 5 (lower is better)
Translates to: HPPPQSSKWIQSAKQ*CQRFISLTCPSLVL
Trigger: TAGTACCAAGCTAGGGCATGTGAGGGAGATAAACCGTTGGCACCACTGTTTTGCAGATTGAATCCATTTACTACTTTGTGGTGGGGGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465930.1
CDS CCA 90 bp GCTCCTTGGATTCTTCAGGAACATCCCCCACCACAAAGTAGTAAATaGATTCAATCTGCAAAACAGTGGTGCCAACGGTTTATCTCCCTC +
Preference number: 5 (lower is better)
Translates to: APWILQEHPPPQSSK*IQSAKQWCQRFISL
Trigger: GAGGGAGATAAACCGTTGGCACCACTGTTTTGCAGATTGAATCCATTTACTACTTTGTGGTGGGGGATGTTCCTGAAGAATCCAAGGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465930.1
CDS-3UTR CAA 90 bp TTATATCCACAACCCCATCAGCGTGGCGGAAAGAGCAGTCGGCAAGCACATCATGATTTAGCTGTCAGATaGTATACTCTGCCATCTTCT +
Preference number: 5 (lower is better)
Translates to: LYPQPHQRGGKSSRQAHHDLAVR*YTLPSS
Trigger: AGAAGATGGCAGAGTATACAATCTGACAGCTAAATC...ATGATGTGCTTGCCGACTGCTCTTTCCGCCACGCTGATGGGGTTGTGGATATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416277.5
ENST00000448638.5
CDS-3UTR CAA 90 bp AGAATAAAGGTCTTGCATCTTCTCCAGATCACTGTGACCCTGTTCCATTTCCTTAAAATCTGCCGGCTCTaGCTGGTGAGCCAGTCCATT +
Preference number: 5 (lower is better)
Translates to: RIKVLHLLQITVTLFHFLKICRL*LVSQSI
Trigger: AATGGACTGGCTCACCAGCAAGAGCCGGCAGATTTT...AAGGAAATGGAACAGGGTCACAGTGATCTGGAGAAGATGCAAGACCTTTATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000433678.5
ENST00000448638.5
CDS-3UTR CAA 90 bp TTCCTGTATGAACTGAATGATCTTGTCCTTCACCAAGTCCAGTTTGCTCTTCATGCTCCTGGAGAACCATaGTTAGAGCCTCTCGGCACA +
Preference number: 5 (lower is better)
Translates to: FLYELNDLVLHQVQFALHAPGEP*LEPLGT
Trigger: TGTGCCGAGAGGCTCTAACAATGGTTCTCCAGGAGC...ATGAAGAGCAAACTGGACTTGGTGAAGGACAAGATCATTCAGTTCATACAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
CDS-3UTR CAA 90 bp TGTCATCCAGCCACTCCTCAGCCAGCAAGATGCTCATTTCTTTGTCACTTAGAGCCACTTCACAGGCTCTaGAGAAACCCGTATGATATT +
Preference number: 5 (lower is better)
Translates to: CHPATPQPARCSFLCHLEPLHRL*RNPYDI
Trigger: AATATCATACGGGTTTCTCAAGAGCCTGTGAAGTGG...CTCTAAGTGACAAAGAAATGAGCATCTTGCTGGCTGAGGAGTGGCTGGATGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
CDS-3UTR CAA 90 bp TTTCTGCAGCCATGTCTTAGAGTCCCAGGTGTCTTCTGGATTCGATGCAATCTCCCACTTCACAGGCTCTaGAGAAACCCGTATGATATT +
Preference number: 5 (lower is better)
Translates to: FLQPCLRVPGVFWIRCNLPLHRL*RNPYDI
Trigger: AATATCATACGGGTTTCTCAAGAGCCTGTGAAGTGG...GAGATTGCATCGAATCCAGAAGACACCTGGGACTCTAAGACATGGCTGCAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432242.5
CDS-3UTR CAA 90 bp TTGGCTGATCTTAATAAGTGCACTCCGAGGGCAAAATTCTCTCCGGTTGTTACATGGAGGAGAAGCTCCTaGGATTCTTCAGGAACATCC +
Preference number: 5 (lower is better)
Translates to: LADLNKCTPRAKFSPVVTWRRSS*DSSGTS
Trigger: GGATGTTCCTGAAGAATCCAAGGAGCTTCTCCTCCA...TGTAACAACCGGAGAGAATTTTGCCCTCGGAGTGCACTTATTAAGATCAGCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432242.5
CDS-3UTR CAA 90 bp CTGAAGACACATCTGAAGAATCGTGGTCATAAACCTGGCTTCCTTCTCGCGTCATTCCAAGTCATCACATaGTCACCATCCTTTGTGGAG +
Preference number: 5 (lower is better)
Translates to: LKTHLKNRGHKPGFLLASFQVIT*SPSFVE
Trigger: CTCCACAAAGGATGGTGACAATGTGATGACTTGGAA...TGACGCGAGAAGGAAGCCAGGTTTATGACCACGATTCTTCAGATGTGTCTTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416277.5
ENST00000432242.5
CDS-3UTR CAA 90 bp ATGGAACTCTCCTCCAGTCAAAGCAGCAACCTCTTTCAAAAACCTGTTTGCAATGGCTTCCTCCATCTCTaGCCAAACGAGAAACACGTC +
Preference number: 5 (lower is better)
Translates to: MELSSSQSSNLFQKPVCNGFLHL*PNEKHV
Trigger: GACGTGTTTCTCGTTTGGCAAGAGATGGAGGAAGCC...ATTGCAAACAGGTTTTTGAAAGAGGTTGCTGCTTTGACTGGAGGAGAGTTCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000433678.5
ENST00000448638.5
CDS-3UTR CAA 90 bp AATGGAACTCTCCTCCAGTCAAAGCAGCAACCTCTTTCAAAAACCTGTTTGCAAGGCTTCCTCCATCTCTaGCCAAACGAGAAACACGTC +
Preference number: 5 (lower is better)
Translates to: NGTLLQSKQQPLSKTCLQGFLHL*PNEKHV
Trigger: GACGTGTTTCTCGTTTGGCAAGAGATGGAGGAAGCC...TTGCAAACAGGTTTTTGAAAGAGGTTGCTGCTTTGACTGGAGGAGAGTTCCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000433678.5
ENST00000448638.5
CDS-3UTR CAA 90 bp CTTTATCAGCAAAAGCAGTTTTCAGGGCACTCAGGGTGTTTGTGGAGCTTCCAACAATCTCAACAGAGGTaGTTTCTGACTCGCAGTCCA +
Preference number: 5 (lower is better)
Translates to: LYQQKQFSGHSGCLWSFQQSQQR*FLTRSP
Trigger: TGGACTGCGAGTCAGAAACAACCTCTGTTGAGATTG...TTGGAAGCTCCACAAACACCCTGAGTGCCCTGAAAACTGCTTTTGCTGATAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422503.6
ENST00000432242.5
ENST00000448638.5
CDS-3UTR CAA 90 bp CTTTGTTGGATTTCCTTGCAATTTCTGTTGCTCTCCCGGGGCCTTGTTTGCATACAATCTCAACAGAGGTaGTTTCTGACTCGCAGTCCA +
Preference number: 5 (lower is better)
Translates to: LCWISLQFLLLSRGLVCIQSQQR*FLTRSP
Trigger: TGGACTGCGAGTCAGAAACAACCTCTGTTGAGATTG...TATGCAAACAAGGCCCCGGGAGAGCAACAGAAATTGCAAGGAAATCCAACAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432242.5
CDS-3UTR CAA 90 bp CAAGGACTCAGAATAAAGGTCTTGCATCTTCTCCAGATCACTGTGACCCTGTTCCAATCTCAACAGAGGTaGTTTCTGACTCGCAGTCCA +
Preference number: 5 (lower is better)
Translates to: QGLRIKVLHLLQITVTLFQSQQR*FLTRSP
Trigger: TGGACTGCGAGTCAGAAACAACCTCTGTTGAGATTG...GAACAGGGTCACAGTGATCTGGAGAAGATGCAAGACCTTTATTCTGAGTCCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000433678.5
ENST00000448638.5
CDS-3UTR CAA 90 bp AAAGAGCAGTCGGCAAGCACATCATACAAGGATAGCTTCTGGGCCTTCAAGCCAACCTGCTGCAATATTTaGCATGGACTGTCTTCTTGT +
Preference number: 5 (lower is better)
Translates to: KEQSASTSYKDSFWAFKPTCCNI*HGLSSC
Trigger: ACAAGAAGACAGTCCATGCAAAATATTGCAGCAGGT...TGGCTTGAAGGCCCAGAAGCTATCCTTGTATGATGTGCTTGCCGACTGCTCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422503.6
CDS-3UTR CAA 90 bp CTCATGCTGTCTTCAGCTGTATGGAATGAAGGAAACAGCTCCAGAGCGAGAGACACCTGCTGCAATATTTaGCATGGACTGTCTTCTTGT +
Preference number: 5 (lower is better)
Translates to: LMLSSAVWNEGNSSRARDTCCNI*HGLSSC
Trigger: ACAAGAAGACAGTCCATGCAAAATATTGCAGCAGGT...GTCTCTCGCTCTGGAGCTGTTTCCTTCATTCCATACAGCTGAAGACAGCATGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422503.6
ENST00000433678.5
CDS-3UTR CAA 90 bp GAATGCAGGAAATTCTACACACTCTGTTCTCTCGGCAAATGCGTGGAATCTGCTCACTTGCACTTCTCTTaGGTAATGTTGACGTGGACC +
Preference number: 5 (lower is better)
Translates to: ECRKFYTLCSLGKCVESAHLHFS*VMLTWT
Trigger: GGTCCACGTCAACATTACCAAAGAGAAGTGCAAGTG...AGCAGATTCCACGCATTTGCCGAGAGAACAGAGTGTGTAGAATTTCCTGCATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422503.6
CDS-3UTR CAA 90 bp GATCCTCAGGAATTGGGGGTGACTTTATATGAGAGCAAGAGAGCGCATACTTGTCCGCCAAGCAACTGCTaGACCATCAAACTTCACAAA +
Preference number: 5 (lower is better)
Translates to: DPQELGVTLYESKRAHTCPPSNC*TIKLHK
Trigger: TTTGTGAAGTTTGATGGTCAAGCAGTTGCTTGGCGG...ACAAGTATGCGCTCTCTTGCTCTCATATAAAGTCACCCCCAATTCCTGAGGATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000495571.5
CDS-3UTR CAA 90 bp CTTCTTGTTCGTCTCCGCACTGGTCTGCACGGACTCATTCTCCGGTTTGGCTTTTCCAAATTATCTTCATaGACTTCAGCAAGTTGTTCC +
Preference number: 5 (lower is better)
Translates to: LLVRLRTGLHGLILRFGFSKLSS*TSASCS
Trigger: GGAACAACTTGCTGAAGTCAATGAAGATAATTTGGA...AAAGCCAAACCGGAGAATGAGTCCGTGCAGACCAGTGCGGAGACGAACAAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422503.6
CDS-3UTR CAA 90 bp TTGGCTGATCTTAATAAGTGCACTCCGAGGGCAAAATTCTCTCCGGTTGTTACAGGGCACTCAGGGTGTTaGTGGAGCTTCCAATCTTTA +
Preference number: 5 (lower is better)
Translates to: LADLNKCTPRAKFSPVVTGHSGC*WSFQSL
Trigger: TAAAGATTGGAAGCTCCACAAACACCCTGAGTGCCC...TGTAACAACCGGAGAGAATTTTGCCCTCGGAGTGCACTTATTAAGATCAGCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000495571.5
CDS-3UTR CAA 90 bp CAAGGACTCAGAATAAAGGTCTTGCATCTTCTCCAGATCACTGTGACCCTGTTCCCATCCTTTTCTGCATaGTACCACCAGTCCATGATC +
Preference number: 5 (lower is better)
Translates to: QGLRIKVLHLLQITVTLFPSFSA*YHQSMI
Trigger: GATCATGGACTGGTGGTACAATGCAGAAAAGGATGG...GAACAGGGTCACAGTGATCTGGAGAAGATGCAAGACCTTTATTCTGAGTCCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000433678.5
ENST00000448638.5
ENST00000495571.5
CDS-3UTR CAA 90 bp AGGCCCCATGGTCCCTTCAACATATTCAGAGATGAAGTTTGTGTTGAATCGACAGCAGGCTGGTTTTGGTaGATTCTGCGTGAAGGACTT +
Preference number: 5 (lower is better)
Translates to: RPHGPFNIFRDEVCVESTAGWFW*ILREGL
Trigger: AAGTCCTTCACGCAGAATCAACCAAAACCAGCCTGC...TGTCGATTCAACACAAACTTCATCTCTGAATATGTTGAAGGGACCATGGGGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR CAA 90 bp CCAGAAGAGGAAAGCAGAGTTCCTCGCCTCCACATCCTCTACTTCTGGATCCTCTTAATGTCATCTTATTaGTGTCGTTGCACACATGTG +
Preference number: 5 (lower is better)
Translates to: PEEESRVPRLHILYFWILLMSSY*CRCTHV
Trigger: CACATGTGTGCAACGACACAAATAAGATGACATTAA...GAGGATCCAGAAGTAGAGGATGTGGAGGCGAGGAACTCTGCTTTCCTCTTCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR CAA 90 bp GGATTGAATTGCCTGTTCCACTTTTCGCTTGTAGATATTGAGTTTGGCTCCTTGCTCCCGGGGCCTTGTTaGCATAATTCTTCTTGGCAG +
Preference number: 5 (lower is better)
Translates to: GLNCLFHFSLVDIEFGSLLPGPC*HNSSWQ
Trigger: CTGCCAAGAAGAATTATGCAAACAAGGCCCCGGGAG...CAAGGAGCCAAACTCAATATCTACAAGCGAAAAGTGGAACAGGCAATTCAATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR CAA 90 bp TTTGATCTGAAAGGCCCCATGGTCCCTTCAACATATTCAGAGATGAAGTTTGTGCAGATGACTCGAAACTaGGAACAGCACCGCAGTCCA +
Preference number: 5 (lower is better)
Translates to: FDLKGPMVPSTYSEMKFVQMTRN*EQHRSP
Trigger: TGGACTGCGGTGCTGTTCCAAGTTTCGAGTCATCTG...CACAAACTTCATCTCTGAATATGTTGAAGGGACCATGGGGCCTTTCAGATCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416277.5
CDS-3UTR CAA 90 bp AATTATAAAAATGGAACTCTCCTCCAGTCAAAGCAGCAACCTCTTTCAAAAACCGAAGCCCACCAGTGCTaGGGTGCGGCTCACACACTT +
Preference number: 5 (lower is better)
Translates to: NYKNGTLLQSKQQPLSKTEAHQC*GAAHTL
Trigger: AAGTGTGTGAGCCGCACCCAAGCACTGGTGGGCTTC...GGTTTTTGAAAGAGGTTGCTGCTTTGACTGGAGGAGAGTTCCATTTTTATAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000495571.5
CDS-3UTR CAA 90 bp AGGGGATGTTCAGTCTTGCAGATCTCAGACAAGTTACCGAGTCTGAATTTCAGTAACAAGATTGCGGGCTaGGATCCTGACTATGCTGAC +
Preference number: 5 (lower is better)
Translates to: RGCSVLQISDKLPSLNFSNKIAG*DPDYAD
Trigger: GTCAGCATAGTCAGGATCCAAGCCCGCAATCTTGTT...ACTGAAATTCAGACTCGGTAACTTGTCTGAGATCTGCAAGACTGAACATCCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CAA 90 bp AAGACACATCTGAAGAATCGTGGTCATAAACCTGGCTTCCTTCTCGCGTCACCTTGTTTCAAGGTCAATTaGTTGCTCTTAAGCCCATGC +
Preference number: 5 (lower is better)
Translates to: KTHLKNRGHKPGFLLASPCFKVN*LLLSPC
Trigger: GCATGGGCTTAAGAGCAACAAATTGACCTTGAAACA...AGGTGACGCGAGAAGGAAGCCAGGTTTATGACCACGATTCTTCAGATGTGTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
CDS-3UTR CAA 90 bp TTTGACCTGGTCTATAACTGTTTCAGGTGGCTGATCAGGTCTCCCATCGGTCAGGATTTAGCTGTCAGATaGTATACTCTGCCATCTTCT +
Preference number: 5 (lower is better)
Translates to: FDLVYNCFRWLIRSPIGQDLAVR*YTLPSS
Trigger: AGAAGATGGCAGAGTATACAATCTGACAGCTAAATC...CTGACCGATGGGAGACCTGATCAGCCACCTGAAACAGTTATAGACCAGGTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416277.5
ENST00000448638.5
CDS-3UTR CAA 90 bp CTTTTCTGCATTGTACCACCAGTCCATGATCAAGGACTCAGAATAAAGGTCTTGTGGAGGAGAAGCTCCTaGGATTCTTCAGGAACATCC +
Preference number: 5 (lower is better)
Translates to: LFCIVPPVHDQGLRIKVLWRRSS*DSSGTS
Trigger: GGATGTTCCTGAAGAATCCAAGGAGCTTCTCCTCCA...CAAGACCTTTATTCTGAGTCCTTGATCATGGACTGGTGGTACAATGCAGAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000433678.5
CDS-3UTR CAA 90 bp AGGCCCCATGGTCCCTTCAACATATTCAGAGATGAAGTTTGTGTTGAATCGACAAATCTGCTGTGGGTCTaGGCACTCAGATCCTTTAGA +
Preference number: 5 (lower is better)
Translates to: RPHGPFNIFRDEVCVESTNLLWV*ALRSFR
Trigger: TCTAAAGGATCTGAGTGCCAAGACCCACAGCAGATT...TGTCGATTCAACACAAACTTCATCTCTGAATATGTTGAAGGGACCATGGGGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416277.5
ENST00000432242.5
CDS-3UTR CAA 90 bp AACTATACAGTAGGGGATGTTCAGTCTTGCAGATCTCAGACAAGTTACCGAGTCAATCTGCTGTGGGTCTaGGCACTCAGATCCTTTAGA +
Preference number: 5 (lower is better)
Translates to: NYTVGDVQSCRSQTSYRVNLLWV*ALRSFR
Trigger: TCTAAAGGATCTGAGTGCCAAGACCCACAGCAGATT...GACTCGGTAACTTGTCTGAGATCTGCAAGACTGAACATCCCCTACTGTATAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000477737.6
CDS-3UTR CAA 90 bp CAAGGACTCAGAATAAAGGTCTTGCATCTTCTCCAGATCACTGTGACCCTGTTCGACTCATTCTCCGGTTaGGCTTTTATATCCACAACC +
Preference number: 5 (lower is better)
Translates to: QGLRIKVLHLLQITVTLFDSFSG*AFISTT
Trigger: GGTTGTGGATATAAAAGCCAAACCGGAGAATGAGTC...GAACAGGGTCACAGTGATCTGGAGAAGATGCAAGACCTTTATTCTGAGTCCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000433678.5
ENST00000448638.5
CDS-3UTR CAA 90 bp AGAATAAAGGTCTTGCATCTTCTCCAGATCACTGTGACCCTGTTCCATTTCCTTGGGCACTCAGGGTGTTaGTGGAGCTTCCAATCTTTA +
Preference number: 5 (lower is better)
Translates to: RIKVLHLLQITVTLFHFLGHSGC*WSFQSL
Trigger: TAAAGATTGGAAGCTCCACAAACACCCTGAGTGCCC...AAGGAAATGGAACAGGGTCACAGTGATCTGGAGAAGATGCAAGACCTTTATTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000433678.5
ENST00000448638.5
ENST00000495571.5
CDS-3UTR CAA 90 bp CTTTTCTGCATTGTACCACCAGTCCATGATCAAGGACTCAGAATAAAGGTCTTGGGGCACTCAGGGTGTTaGTGGAGCTTCCAATCTTTA +
Preference number: 5 (lower is better)
Translates to: LFCIVPPVHDQGLRIKVLGHSGC*WSFQSL
Trigger: TAAAGATTGGAAGCTCCACAAACACCCTGAGTGCCC...CAAGACCTTTATTCTGAGTCCTTGATCATGGACTGGTGGTACAATGCAGAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000433678.5
ENST00000448638.5
ENST00000495571.5
CDS-3UTR CAA 90 bp AGAGTTTTTATTCTGGTTTCGGGCTCAATTAGAGTTACCTACAACAGACTCCGCGGGCACTCAGGGTGTTaGTGGAGCTTCCAATCTTTA +
Preference number: 5 (lower is better)
Translates to: RVFILVSGSIRVTYNRLRGHSGC*WSFQSL
Trigger: TAAAGATTGGAAGCTCCACAAACACCCTGAGTGCCC...GCGGAGTCTGTTGTAGGTAACTCTAATTGAGCCCGAAACCAGAATAAAAACTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495571.5
CDS-3UTR CAA 90 bp CCACCAGTCCATGATCAAGGACTCAGAATAAAGGTCTTGCATCTTCTCCAGATCCGGTCAGAAGGTAGATaGCCTGTGTTTCTTTATCAG +
Preference number: 5 (lower is better)
Translates to: PPVHDQGLRIKVLHLLQIRSEGR*PVFLYQ
Trigger: CTGATAAAGAAACACAGGCAATCTACCTTCTGACCG...GATCTGGAGAAGATGCAAGACCTTTATTCTGAGTCCTTGATCATGGACTGGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000433678.5
ENST00000448638.5
ENST00000495571.5
CDS-3UTR CAA 90 bp AGATGCAATCATTATGCAATCTTCCAAAGAGGCTTTGACTCCCATCCTGTAGCCCCATCCTTTTCTGCATaGTACCACCAGTCCATGATC +
Preference number: 5 (lower is better)
Translates to: RCNHYAIFQRGFDSHPVAPSFSA*YHQSMI
Trigger: GATCATGGACTGGTGGTACAATGCAGAAAAGGATGG...GGCTACAGGATGGGAGTCAAAGCCTCTTTGGAAGATTGCATAATGATTGCATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
CDS-3UTR CAA 90 bp CTGAAGACACATCTGAAGAATCGTGGTCATAAACCTGGCTTCCTTCTCGCGTCAAGAACAGATTTCCTTTaGATGCTTGCTGTCTCCATC +
Preference number: 5 (lower is better)
Translates to: LKTHLKNRGHKPGFLLASRTDFL*MLAVSI
Trigger: GATGGAGACAGCAAGCATCAAAAGGAAATCTGTTCT...TGACGCGAGAAGGAAGCCAGGTTTATGACCACGATTCTTCAGATGTGTCTTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
ENST00000495571.5
CDS-3UTR CAA 90 bp CTTTTCTGCATTGTACCACCAGTCCATGATCAAGGACTCAGAATAAAGGTCTTGGCAGGCTGGTTTTGGTaGATTCTGCGTGAAGGACTT +
Preference number: 5 (lower is better)
Translates to: LFCIVPPVHDQGLRIKVLAGWFW*ILREGL
Trigger: AAGTCCTTCACGCAGAATCAACCAAAACCAGCCTGC...CAAGACCTTTATTCTGAGTCCTTGATCATGGACTGGTGGTACAATGCAGAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
ENST00000495571.5
CDS-3UTR CAA 90 bp TCCTGGAGTTCCATGGCCTGCTGGATGTACATTTTCCCAGCTAGGATTTCACTTAAGATGCTCATTTCTTaGTCACTTAGAGCAGTCCTC +
Preference number: 5 (lower is better)
Translates to: SWSSMACWMYIFPARISLKMLIS*SLRAVL
Trigger: GAGGACTGCTCTAAGTGACAAAGAAATGAGCATCTT...AAGTGAAATCCTAGCTGGGAAAATGTACATCCAGCAGGCCATGGAACTCCAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR CAA 90 bp GAAAGGCCCCATGGTCCCTTCAACATATTCAGAGATGAAGTTTGTGTTGAATCGATCTTATTTGTGTCGTaGCACACATGTGCCAGAGGG +
Preference number: 5 (lower is better)
Translates to: ERPHGPFNIFRDEVCVESILFVS*HTCARG
Trigger: CCCTCTGGCACATGTGTGCAACGACACAAATAAGAT...CGATTCAACACAAACTTCATCTCTGAATATGTTGAAGGGACCATGGGGCCTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR CAA 90 bp CTTTCAGTGGCCAGAAGAGGAAAGCAGAGTTCCTCGCCTCCACATCCTCTACTTTTAATGTCATCTTATTaGTGTCGTTGCACACATGTG +
Preference number: 5 (lower is better)
Translates to: LSVARRGKQSSSPPHPLLLMSSY*CRCTHV
Trigger: CACATGTGTGCAACGACACAAATAAGATGACATTAA...AAGTAGAGGATGTGGAGGCGAGGAACTCTGCTTTCCTCTTCTGGCCACTGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR CAA 90 bp ATTAGAGTTACCTACAACAGACTCCGCGGAGGGGCCAGTTTCAGTGTCAACGCTTTAATGTCATCTTATTaGTGTCGTTGCACACATGTG +
Preference number: 5 (lower is better)
Translates to: IRVTYNRLRGGASFSVNALMSSY*CRCTHV
Trigger: CACATGTGTGCAACGACACAAATAAGATGACATTAA...AGCGTTGACACTGAAACTGGCCCCTCCGCGGAGTCTGTTGTAGGTAACTCTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495571.5
ENST00000614454.1
CDS-3UTR CAA 90 bp CCACTCATGCTGTCTTCAGCTGTATGGAATGAAGGAAACAGCTCCAGAGCGAGATTTCATAGGATTGAATaGCCTGTTCCACTTTTCGCT +
Preference number: 5 (lower is better)
Translates to: PLMLSSAVWNEGNSSRARFHRIE*PVPLFA
Trigger: AGCGAAAAGTGGAACAGGCAATTCAATCCTATGAAA...TCTCGCTCTGGAGCTGTTTCCTTCATTCCATACAGCTGAAGACAGCATGAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000495571.5
CDS-3UTR CAA 90 bp AATTATAAAAATGGAACTCTCCTCCAGTCAAAGCAGCAACCTCTTTCAAAAACCGCGAGAGACTTGGGCTaGAAGCTCATCCAGCACTGC +
Preference number: 5 (lower is better)
Translates to: NYKNGTLLQSKQQPLSKTARDLG*KLIQHC
Trigger: GCAGTGCTGGATGAGCTTCAAGCCCAAGTCTCTCGC...GGTTTTTGAAAGAGGTTGCTGCTTTGACTGGAGGAGAGTTCCATTTTTATAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000433678.5
ENST00000495571.5
CDS-3UTR CAA 90 bp AACTATACAGTAGGGGATGTTCAGTCTTGCAGATCTCAGACAAGTTACCGAGTCGTGGCCACATGCTTATaGGGAAGTGCTATGACAATG +
Preference number: 5 (lower is better)
Translates to: NYTVGDVQSCRSQTSYRVVATCL*GSAMTM
Trigger: CATTGTCATAGCACTTCCCAATAAGCATGTGGCCAC...GACTCGGTAACTTGTCTGAGATCTGCAAGACTGAACATCCCCTACTGTATAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CAA 90 bp AGATTGCGGGCTTGGATCCTGACTATGCTGACTGCTAAACAATTTGAAAGTCCTGTGGCCACATGCTTATaGGGAAGTGCTATGACAATG +
Preference number: 5 (lower is better)
Translates to: RLRAWILTMLTAKQFESPVATCL*GSAMTM
Trigger: CATTGTCATAGCACTTCCCAATAAGCATGTGGCCAC...AGGACTTTCAAATTGTTTAGCAGTCAGCATAGTCAGGATCCAAGCCCGCAATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CAA 90 bp GTTTGCATAATTCTTCTTGGCAGCCTCCTGGAGTTCCATGGCCTGCTGGATGTACAAAATTCTCTCCGGTaGTTACACTTCAAAACTGTG +
Preference number: 5 (lower is better)
Translates to: VCIILLGSLLEFHGLLDVQNSLR*LHFKTV
Trigger: CACAGTTTTGAAGTGTAACAACCGGAGAGAATTTTG...TACATCCAGCAGGCCATGGAACTCCAGGAGGCTGCCAAGAAGAATTATGCAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR CAA 90 bp TGGAGTTCCATGGCCTGCTGGATGTACATTTTCCCAGCTAGGATTTCACTTTCCGAGCGCATACTTGTTTaGGCTGATCTTAATAAGTGC +
Preference number: 5 (lower is better)
Translates to: WSSMACWMYIFPARISLSERILV*ADLNKC
Trigger: GCACTTATTAAGATCAGCCAAAACAAGTATGCGCTC...GGAAAGTGAAATCCTAGCTGGGAAAATGTACATCCAGCAGGCCATGGAACTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR CAA 90 bp AACCTGATTCAGAATGCTGATGAGAACAGTGGCATATTTTGCAGGTCAGGTTGGTCAGCCAAGTCTGTTTaGGTGTTAATCCATCCCTCT +
Preference number: 5 (lower is better)
Translates to: NLIQNADENSGIFCRSGWSAKSV*VLIHPS
Trigger: AGAGGGATGGATTAACACCAAAACAGACTTGGCTGA...CCAACCTGACCTGCAAAATATGCCACTGTTCTCATCAGCATTCTGAATCAGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432242.5
CDS-3UTR CAA 90 bp TTGTCATCCAGCCACTCCTCAGCCAGCAAGATGCTCATTTCTTTGTCACTTAGATGTTTCAAGGTCAATTaGTTGCTCTTAAGCCCATGC +
Preference number: 5 (lower is better)
Translates to: LSSSHSSASKMLISLSLRCFKVN*LLLSPC
Trigger: GCATGGGCTTAAGAGCAACAAATTGACCTTGAAACA...TCTAAGTGACAAAGAAATGAGCATCTTGCTGGCTGAGGAGTGGCTGGATGACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
CDS-3UTR CAA 90 bp CGTTTGACCTGGTCTATAACTGTTTCAGGTGGAATGATACACATGACAGTCTCTAATCTGCTGTGGGTCTaGGCACTCAGATCCTTTAGA +
Preference number: 5 (lower is better)
Translates to: RLTWSITVSGGMIHMTVSNLLWV*ALRSFR
Trigger: TCTAAAGGATCTGAGTGCCAAGACCCACAGCAGATT...AGAGACTGTCATGTGTATCATTCCACCTGAAACAGTTATAGACCAGGTCAAACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000433678.5
CDS-3UTR CAA 90 bp CCACTCATGCTGTCTTCAGCTGTATGGAATGAAGGAAACAGCTCCAGAGCGAGATCCAAATTATCTTCATaGACTTCAGCAAGTTGTTCC +
Preference number: 5 (lower is better)
Translates to: PLMLSSAVWNEGNSSRARSKLSS*TSASCS
Trigger: GGAACAACTTGCTGAAGTCAATGAAGATAATTTGGA...TCTCGCTCTGGAGCTGTTTCCTTCATTCCATACAGCTGAAGACAGCATGAGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000422503.6
ENST00000432242.5
ENST00000433678.5
ENST00000495571.5
CDS-3UTR CAA 90 bp AAAACAAGATTGCGGGCTTGGATCCTGACTATGCTGACTGCTAAACAATTTGAAGGGCACTCAGGGTGTTaGTGGAGCTTCCAATCTTTA +
Preference number: 5 (lower is better)
Translates to: KTRLRAWILTMLTAKQFEGHSGC*WSFQSL
Trigger: TAAAGATTGGAAGCTCCACAAACACCCTGAGTGCCC...TTCAAATTGTTTAGCAGTCAGCATAGTCAGGATCCAAGCCCGCAATCTTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000477737.6
CDS-3UTR CAA 90 bp GATCAAGGACTCAGAATAAAGGTCTTGCATCTTCTCCAGATCACTGTGACCCTGCTCAGAATAAAGGTCTaGCATCTTCTCCAGATCACT +
Preference number: 5 (lower is better)
Translates to: DQGLRIKVLHLLQITVTLLRIKV*HLLQIT
Trigger: AGTGATCTGGAGAAGATGCAAGACCTTTATTCTGAG...CAGGGTCACAGTGATCTGGAGAAGATGCAAGACCTTTATTCTGAGTCCTTGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000433678.5
ENST00000448638.5
ENST00000495571.5
CDS-3UTR CAA 90 bp ACGTTTGACCTGGTCTATAACTGTTTCAGGTGGAATGATACACATGACAGTCTCCCATCCTTTTCTGCATaGTACCACCAGTCCATGATC +
Preference number: 5 (lower is better)
Translates to: TFDLVYNCFRWNDTHDSLPSFSA*YHQSMI
Trigger: GATCATGGACTGGTGGTACAATGCAGAAAAGGATGG...GAGACTGTCATGTGTATCATTCCACCTGAAACAGTTATAGACCAGGTCAAACGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000433678.5
ENST00000495571.5
CDS-3UTR CAA 90 bp TGGAGTTCCATGGCCTGCTGGATGTACATTTTCCCAGCTAGGATTTCACTTTCCGAGATGAAGTTTGTGTaGAATCGACATCAGATTGAG +
Preference number: 5 (lower is better)
Translates to: WSSMACWMYIFPARISLSEMKFV*NRHQIE
Trigger: CTCAATCTGATGTCGATTCAACACAAACTTCATCTC...GGAAAGTGAAATCCTAGCTGGGAAAATGTACATCCAGCAGGCCATGGAACTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR CAA 90 bp ATGGAACTCTCCTCCAGTCAAAGCAGCAACCTCTTTCAAAAACCTGTTTGCAATACCTTTTCTGACGATTaGTCATCCAGCCACTCCTCA +
Preference number: 5 (lower is better)
Translates to: MELSSSQSSNLFQKPVCNTFSDD*SSSHSS
Trigger: TGAGGAGTGGCTGGATGACAAATCGTCAGAAAAGGT...ATTGCAAACAGGTTTTTGAAAGAGGTTGCTGCTTTGACTGGAGGAGAGTTCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
ENST00000495571.5
CDS-3UTR CAA 90 bp CCCATGGTCCCTTCAACATATTCAGAGATGAAGTTTGTGTTGAATCGACATCAGATCTTATTTGTGTCGTaGCACACATGTGCCAGAGGG +
Preference number: 5 (lower is better)
Translates to: PMVPSTYSEMKFVLNRHQILFVS*HTCARG
Trigger: CCCTCTGGCACATGTGTGCAACGACACAAATAAGAT...CTGATGTCGATTCAACACAAACTTCATCTCTGAATATGTTGAAGGGACCATGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000495571.5
CDS-3UTR CAA 90 bp TCCTGGAGTTCCATGGCCTGCTGGATGTACATTTTCCCAGCTAGGATTTCACTTTTTCATAGGATTGAATaGCCTGTTCCACTTTTCGCT +
Preference number: 5 (lower is better)
Translates to: SWSSMACWMYIFPARISLFHRIE*PVPLFA
Trigger: AGCGAAAAGTGGAACAGGCAATTCAATCCTATGAAA...AAGTGAAATCCTAGCTGGGAAAATGTACATCCAGCAGGCCATGGAACTCCAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR CAA 90 bp ATAAAAATGGAACTCTCCTCCAGTCAAAGCAGCAACCTCTTTCAAAAACCTGTTTCCTTGCAATTTCTGTaGCTCTCCCGGGGCCTTGTT +
Preference number: 5 (lower is better)
Translates to: IKMELSSSQSSNLFQKPVSLQFL*LSRGLV
Trigger: AACAAGGCCCCGGGAGAGCAACAGAAATTGCAAGGA...AACAGGTTTTTGAAAGAGGTTGCTGCTTTGACTGGAGGAGAGTTCCATTTTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000495571.5
CDS-3UTR CAA 90 bp GATCAAGGACTCAGAATAAAGGTCTTGCATCTTCTCCAGATCACTGTGACCCTGAATGAGTGTCACAGCTaGTTACAGCATTGGAGATAC +
Preference number: 5 (lower is better)
Translates to: DQGLRIKVLHLLQITVTLNECHS*LQHWRY
Trigger: GTATCTCCAATGCTGTAACAAGCTGTGACACTCATT...CAGGGTCACAGTGATCTGGAGAAGATGCAAGACCTTTATTCTGAGTCCTTGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432242.5
CDS-3UTR CAA 90 bp GATCCTCAGGAATTGGGGGTGACTTTATATGAGAGCAAGAGAGCGCATACTTGTGAGCGCATACTTGTTTaGGCTGATCTTAATAAGTGC +
Preference number: 5 (lower is better)
Translates to: DPQELGVTLYESKRAHTCERILV*ADLNKC
Trigger: GCACTTATTAAGATCAGCCAAAACAAGTATGCGCTC...ACAAGTATGCGCTCTCTTGCTCTCATATAAAGTCACCCCCAATTCCTGAGGATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR CAA 90 bp TGTCATCCAGCCACTCCTCAGCCAGCAAGATGCTCATTTCTTTGTCACTTAGAGCAAGAGAGCGCATACTaGTTTTGGCTGATCTTAATA +
Preference number: 5 (lower is better)
Translates to: CHPATPQPARCSFLCHLEQESAY*FWLILI
Trigger: TATTAAGATCAGCCAAAACAAGTATGCGCTCTCTTG...CTCTAAGTGACAAAGAAATGAGCATCTTGCTGGCTGAGGAGTGGCTGGATGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR CAA 90 bp GAGCAAGAGAGCGCATACTTGTTTTGGCTGATCTTAATAAGTGCACTCCGAGGGCAAGAGAGCGCATACTaGTTTTGGCTGATCTTAATA +
Preference number: 5 (lower is better)
Translates to: EQESAYLFWLILISALRGQESAY*FWLILI
Trigger: TATTAAGATCAGCCAAAACAAGTATGCGCTCTCTTG...CCCTCGGAGTGCACTTATTAAGATCAGCCAAAACAAGTATGCGCTCTCTTGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR CAA 90 bp AGATTGCGGGCTTGGATCCTGACTATGCTGACTGCTAAACAATTTGAAAGTCCTAGAACAGATTTCCTTTaGATGCCTGAACAGCCTCTG +
Preference number: 5 (lower is better)
Translates to: RLRAWILTMLTAKQFESPRTDFL*MPEQPL
Trigger: CAGAGGCTGTTCAGGCATCAAAAGGAAATCTGTTCT...AGGACTTTCAAATTGTTTAGCAGTCAGCATAGTCAGGATCCAAGCCCGCAATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489630.5
CDS GCA 90 bp ATTCAATCTGCAAAACAGTGGTGCCAACGGTTTATCTCCCTCACATaGCCTAGCTTGGTACTAGTCTCATCAGTAATACCCATTCTACAA +
Preference number: 5 (lower is better)
Translates to: IQSAKQWCQRFISLT*PSLVLVSSVIPILQ
Trigger: TTGTAGAATGGGTATTACTGATGAGACTAGTACCAAGCTAGGGCATGTGAGGGAGATAAACCGTTGGCACCACTGTTTTGCAGATTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465930.1
CDS-3UTR CAA 90 bp AAACGTTTGACCTGGTCTATAACTGTTTCAGGTGGAATGATACACATGACAGTCTTCTCTTTGGTAATGTaGACGTGGACCAAGCTCCCA +
Preference number: 5 (lower is better)
Translates to: KRLTWSITVSGGMIHMTVFSLVM*TWTKLP
Trigger: TGGGAGCTTGGTCCACGTCAACATTACCAAAGAGAA...GACTGTCATGTGTATCATTCCACCTGAAACAGTTATAGACCAGGTCAAACGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433678.5
CDS-3UTR CAA 90 bp CTTTATGTCTCTAATCCAGGACTGAGCCTGTTCCAAATTATCTTCATTGACTTCGGGCACTCAGGGTGTTaGTGGAGCTTCCAATCTTTA +
Preference number: 5 (lower is better)
Translates to: LYVSNPGLSLFQIIFIDFGHSGC*WSFQSL
Trigger: TAAAGATTGGAAGCTCCACAAACACCCTGAGTGCCC...GAAGTCAATGAAGATAATTTGGAACAGGCTCAGTCCTGGATTAGAGACATAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000422503.6
ENST00000432242.5
ENST00000448638.5
CDS-3UTR CAA 90 bp TTTGATCTGAAAGGCCCCATGGTCCCTTCAACATATTCAGAGATGAAGTTTGTGCGGTCAGAAGGTAGATaGCCTGTGTTTCTTTATCAG +
Preference number: 5 (lower is better)
Translates to: FDLKGPMVPSTYSEMKFVRSEGR*PVFLYQ
Trigger: CTGATAAAGAAACACAGGCAATCTACCTTCTGACCG...CACAAACTTCATCTCTGAATATGTTGAAGGGACCATGGGGCCTTTCAGATCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR CAA 90 bp GGATGTTCAGTCTTGCAGATCTCAGACAAGTTACCGAGTCTGAATTTCAGTCCTAGAACAGATTTCCTTTaGATGCTTGCTGTCTCCATC +
Preference number: 5 (lower is better)
Translates to: GCSVLQISDKLPSLNFSPRTDFL*MLAVSI
Trigger: GATGGAGACAGCAAGCATCAAAAGGAAATCTGTTCT...AGGACTGAAATTCAGACTCGGTAACTTGTCTGAGATCTGCAAGACTGAACATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
CDS-3UTR CAA 90 bp GATCAGGTCTCCCATCGGTCAGAAGGTAGATTGCCTGTGTTTCTTTATCAGCAAGAGATGAAGTTTGTGTaGAATCGACATCAGATTGAG +
Preference number: 5 (lower is better)
Translates to: DQVSHRSEGRLPVFLYQQEMKFV*NRHQIE
Trigger: CTCAATCTGATGTCGATTCAACACAAACTTCATCTC...TTGCTGATAAAGAAACACAGGCAATCTACCTTCTGACCGATGGGAGACCTGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
CDS-3UTR CAA 90 bp TCAGTCTTGCAGATCTCAGACAAGTTACCGAGTCTGAATTTCAGTCCTAATATTGCAGGCTGGTTTTGGTaGATTCTGCGTGAAGGACTT +
Preference number: 5 (lower is better)
Translates to: SVLQISDKLPSLNFSPNIAGWFW*ILREGL
Trigger: AAGTCCTTCACGCAGAATCAACCAAAACCAGCCTGC...AATATTAGGACTGAAATTCAGACTCGGTAACTTGTCTGAGATCTGCAAGACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CAA 90 bp AGATGCAATCATTATGCAATCTTCCAAAGAGGCTTTGACTCCCATCCTGTAGCCAAGATGCTCATTTCTTaGTCACTTAGAGCAGTCCTC +
Preference number: 5 (lower is better)
Translates to: RCNHYAIFQRGFDSHPVAKMLIS*SLRAVL
Trigger: GAGGACTGCTCTAAGTGACAAAGAAATGAGCATCTT...GGCTACAGGATGGGAGTCAAAGCCTCTTTGGAAGATTGCATAATGATTGCATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
CDS-3UTR CAA 90 bp GGATGTTCAGTCTTGCAGATCTCAGACAAGTTACCGAGTCTGAATTTCAGTCCTGCGCTTTTCATAGGATaGAATTGCCTGTTCCACTTT +
Preference number: 5 (lower is better)
Translates to: GCSVLQISDKLPSLNFSPALFIG*NCLFHF
Trigger: AAAGTGGAACAGGCAATTCAATCCTATGAAAAGCGC...AGGACTGAAATTCAGACTCGGTAACTTGTCTGAGATCTGCAAGACTGAACATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS TCA 90 bp CAATTTGTTGCTCTTAAGCCCATGCAGTTGAAGCCATTTCTCAGATaGAATGAGACTCTGCTCAGCCAAGTCTGTTTTGGTGTTAATCCA +
Preference number: 5 (lower is better)
Translates to: QFVALKPMQLKPFLR*NETLLSQVCFGVNP
Trigger: TGGATTAACACCAAAACAGACTTGGCTGAGCAGAGTCTCATTTCATCTGAGAAATGGCTTCAACTGCATGGGCTTAAGAGCAACAAATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000409460.5
ENST00000416277.5
ENST00000422503.6
ENST00000432242.5
ENST00000433678.5
ENST00000448079.5
ENST00000448638.5
ENST00000477737.6
ENST00000483669.5
ENST00000484571.5
CDS CCA 90 bp GTCCCTATCAAAATTCATGTCAATACATTGACATCCAAAAATGGATaGAGTCATCAGCTTGCGCGTACTTCACCTTGGAAAGTGTGTGAC +
Preference number: 5 (lower is better)
Translates to: VPIKIHVNTLTSKNG*SHQLARTSPWKVCD
Trigger: GTCACACACTTTCCAAGGTGAAGTACGCGCAAGCTGATGACTCCATCCATTTTTGGATGTCAATGTATTGACATGAATTTTGATAGGGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463635.1
CDS-3UTR CAA 90 bp AAACGTTTGACCTGGTCTATAACTGTTTCAGGTGGAATGATACACATGACAGTCTCAGCCAAGTCTGTTTaGGTGTTAATCCATCCCTCT +
Preference number: 5 (lower is better)
Translates to: KRLTWSITVSGGMIHMTVSAKSV*VLIHPS
Trigger: AGAGGGATGGATTAACACCAAAACAGACTTGGCTGA...GACTGTCATGTGTATCATTCCACCTGAAACAGTTATAGACCAGGTCAAACGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000433678.5
CDS-3UTR CAA 90 bp GAGAATGTAGATGCAATCATTATGCAATCTTCCAAAGAGGCTTTGACTCCCATCTCAGCCAAGTCTGTTTaGGTGTTAATCCATCCCTCT +
Preference number: 5 (lower is better)
Translates to: ENVDAIIMQSSKEALTPISAKSV*VLIHPS
Trigger: AGAGGGATGGATTAACACCAAAACAGACTTGGCTGA...GATGGGAGTCAAAGCCTCTTTGGAAGATTGCATAATGATTGCATCTACATTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000422503.6
ENST00000432242.5
ENST00000448638.5
CDS-3UTR CAA 90 bp CTTTATGTCTCTAATCCAGGACTGAGCCTGTTCCAAATTATCTTCATTGACTTCCAATCTCAACAGAGGTaGTTTCTGACTCGCAGTCCA +
Preference number: 5 (lower is better)
Translates to: LYVSNPGLSLFQIIFIDFQSQQR*FLTRSP
Trigger: TGGACTGCGAGTCAGAAACAACCTCTGTTGAGATTG...GAAGTCAATGAAGATAATTTGGAACAGGCTCAGTCCTGGATTAGAGACATAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422503.6
ENST00000432242.5
ENST00000448638.5
CDS-3UTR CAA 90 bp AAACGTTTGACCTGGTCTATAACTGTTTCAGGTGGAATGATACACATGACAGTCGACTCATTCTCCGGTTaGGCTTTTATATCCACAACC +
Preference number: 5 (lower is better)
Translates to: KRLTWSITVSGGMIHMTVDSFSG*AFISTT
Trigger: GGTTGTGGATATAAAAGCCAAACCGGAGAATGAGTC...GACTGTCATGTGTATCATTCCACCTGAAACAGTTATAGACCAGGTCAAACGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000433678.5
CDS-3UTR CAA 90 bp ATAAAAATGGAACTCTCCTCCAGTCAAAGCAGCAACCTCTTTCAAAAACCTGTTCACTTGCACTTCTCTTaGGTAATGTTGACGTGGACC +
Preference number: 5 (lower is better)
Translates to: IKMELSSSQSSNLFQKPVHLHFS*VMLTWT
Trigger: GGTCCACGTCAACATTACCAAAGAGAAGTGCAAGTG...AACAGGTTTTTGAAAGAGGTTGCTGCTTTGACTGGAGGAGAGTTCCATTTTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000433678.5
CDS-3UTR CAA 90 bp AAACGTTTGACCTGGTCTATAACTGTTTCAGGTGGAATGATACACATGACAGTCCTCTCACTGTACCACTaGCACTTCTCTTTGGTAATG +
Preference number: 5 (lower is better)
Translates to: KRLTWSITVSGGMIHMTVLSLYH*HFSLVM
Trigger: CATTACCAAAGAGAAGTGCAAGTGGTACAGTGAGAG...GACTGTCATGTGTATCATTCCACCTGAAACAGTTATAGACCAGGTCAAACGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433678.5
CDS-3UTR CAA 90 bp ATAAAAATGGAACTCTCCTCCAGTCAAAGCAGCAACCTCTTTCAAAAACCTGTTCCGCCAAGCAACTGCTaGACCATCAAACTTCACAAA +
Preference number: 5 (lower is better)
Translates to: IKMELSSSQSSNLFQKPVPPSNC*TIKLHK
Trigger: TTTGTGAAGTTTGATGGTCAAGCAGTTGCTTGGCGG...AACAGGTTTTTGAAAGAGGTTGCTGCTTTGACTGGAGGAGAGTTCCATTTTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000433678.5
ENST00000448638.5
ENST00000495571.5
CDS-3UTR CAA 90 bp AGAGTTTTTATTCTGGTTTCGGGCTCAATTAGAGTTACCTACAACAGACTCCGCAGAACAGATTTCCTTTaGATGCTTGCTGTCTCCATC +
Preference number: 5 (lower is better)
Translates to: RVFILVSGSIRVTYNRLRRTDFL*MLAVSI
Trigger: GATGGAGACAGCAAGCATCAAAAGGAAATCTGTTCT...GCGGAGTCTGTTGTAGGTAACTCTAATTGAGCCCGAAACCAGAATAAAAACTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495571.5
CDS-3UTR CAA 90 bp GAAAGGCCCCATGGTCCCTTCAACATATTCAGAGATGAAGTTTGTGTTGAATCGGAGATGAAGTTTGTGTaGAATCGACATCAGATTGAG +
Preference number: 5 (lower is better)
Translates to: ERPHGPFNIFRDEVCVESEMKFV*NRHQIE
Trigger: CTCAATCTGATGTCGATTCAACACAAACTTCATCTC...CGATTCAACACAAACTTCATCTCTGAATATGTTGAAGGGACCATGGGGCCTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR CAA 90 bp GTAAGAGTTTTTATTCTGGTTTCGGGCTCAATTAGAGTTACCTACAACAGACTCATCTTATTTGTGTCGTaGCACACATGTGCCAGAGGG +
Preference number: 5 (lower is better)
Translates to: VRVFILVSGSIRVTYNRLILFVS*HTCARG
Trigger: CCCTCTGGCACATGTGTGCAACGACACAAATAAGAT...GAGTCTGTTGTAGGTAACTCTAATTGAGCCCGAAACCAGAATAAAAACTCTTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000495571.5
ENST00000614454.1
CDS-3UTR CAA 90 bp GGGTTAATTAATGTCATCTTATTTGTGTCGTTGCACACATGTGCCAGAGGGAACGCGCTTTTCATAGGATaGAATTGCCTGTTCCACTTT +
Preference number: 5 (lower is better)
Translates to: GLINVILFVSLHTCARGNALFIG*NCLFHF
Trigger: AAAGTGGAACAGGCAATTCAATCCTATGAAAAGCGC...GTTCCCTCTGGCACATGTGTGCAACGACACAAATAAGATGACATTAATTAACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432242.5
ENST00000489630.5
ENST00000495571.5
CDS-3UTR CAA 90 bp AGATGCAATCATTATGCAATCTTCCAAAGAGGCTTTGACTCCCATCCTGTAGCCCAAGAGAGCGCATACTaGTTTTGGCTGATCTTAATA +
Preference number: 5 (lower is better)
Translates to: RCNHYAIFQRGFDSHPVAQESAY*FWLILI
Trigger: TATTAAGATCAGCCAAAACAAGTATGCGCTCTCTTG...GGCTACAGGATGGGAGTCAAAGCCTCTTTGGAAGATTGCATAATGATTGCATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432242.5
CDS-3UTR CAA 90 bp ATGAAAATGTCAGGAAACTATACAGTAGGGGATGTTCAGTCTTGCAGATCTCAGAGGGGATGTTCAGTCTaGCAGATCTCAGACAAGTTA +
Preference number: 5 (lower is better)
Translates to: MKMSGNYTVGDVQSCRSQRGCSV*QISDKL
Trigger: TAACTTGTCTGAGATCTGCAAGACTGAACATCCCCT...CTGAGATCTGCAAGACTGAACATCCCCTACTGTATAGTTTCCTGACATTTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS TCA 90 bp AAAATCTGTTTCAAGGTCAATTTGTTGCTCTTAAGCCCATGCAGTTaGAGCCATTTCTCAGATGAAATGAGACTCTGCTCAGCCAAGTCT +
Preference number: 5 (lower is better)
Translates to: KICFKVNLLLLSPCS*SHFSDEMRLCSAKS
Trigger: AGACTTGGCTGAGCAGAGTCTCATTTCATCTGAGAAATGGCTTCAACTGCATGGGCTTAAGAGCAACAAATTGACCTTGAAACAGATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000409460.5
ENST00000416277.5
ENST00000422503.6
ENST00000432242.5
ENST00000433678.5
ENST00000448079.5
ENST00000448638.5
ENST00000477737.6
ENST00000483669.5
ENST00000484571.5
CDS GCA 90 bp TGGGAGAGAGCTTTTGAAAACTTCAAATGTGATTGTGTTTCTCACTaGTTTAAATGTGGCTCTCATTGCCCTCAGGGTAAAGTGCAAATC +
Preference number: 5 (lower is better)
Translates to: WERAFENFKCDCVSH*FKCGSHCPQGKVQI
Trigger: GATTTGCACTTTACCCTGAGGGCAATGAGAGCCACATTTAAAGCAGTGAGAAACACAATCACATTTGAAGTTTTCAAAAGCTCTCTCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409460.5
CDS-3UTR CAA 90 bp AAACGTTTGACCTGGTCTATAACTGTTTCAGGTGGAATGATACACATGACAGTCTGTTTCAAGGTCAATTaGTTGCTCTTAAGCCCATGC +
Preference number: 5 (lower is better)
Translates to: KRLTWSITVSGGMIHMTVCFKVN*LLLSPC
Trigger: GCATGGGCTTAAGAGCAACAAATTGACCTTGAAACA...GACTGTCATGTGTATCATTCCACCTGAAACAGTTATAGACCAGGTCAAACGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000433678.5
CDS-3UTR CAA 90 bp AATGGAACTCTCCTCCAGTCAAAGCAGCAACCTCTTTCAAAAACCTGTTTGCAAGATTTAGCTGTCAGATaGTATACTCTGCCATCTTCT +
Preference number: 5 (lower is better)
Translates to: NGTLLQSKQQPLSKTCLQDLAVR*YTLPSS
Trigger: AGAAGATGGCAGAGTATACAATCTGACAGCTAAATC...TTGCAAACAGGTTTTTGAAAGAGGTTGCTGCTTTGACTGGAGGAGAGTTCCATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000433678.5
ENST00000448638.5
CDS-3UTR CAA 90 bp ATAAAAATGGAACTCTCCTCCAGTCAAAGCAGCAACCTCTTTCAAAAACCTGTTCCACTTCACAGGCTCTaGAGAAACCCGTATGATATT +
Preference number: 5 (lower is better)
Translates to: IKMELSSSQSSNLFQKPVPLHRL*RNPYDI
Trigger: AATATCATACGGGTTTCTCAAGAGCCTGTGAAGTGG...AACAGGTTTTTGAAAGAGGTTGCTGCTTTGACTGGAGGAGAGTTCCATTTTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000433678.5
ENST00000448638.5
CDS-3UTR CAA 90 bp CAAAATTATAAAAATGGAACTCTCCTCCAGTCAAAGCAGCAACCTCTTTCAAAAATGGATTCAATAGTCTaGTCTCTCCCGGCTTCCAGC +
Preference number: 5 (lower is better)
Translates to: QNYKNGTLLQSKQQPLSKMDSIV*SLPASS
Trigger: GCTGGAAGCCGGGAGAGACAAGACTATTGAATCCAT...TTTTGAAAGAGGTTGCTGCTTTGACTGGAGGAGAGTTCCATTTTTATAATTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000433678.5
CDS-3UTR CAA 90 bp AGATTGCGGGCTTGGATCCTGACTATGCTGACTGCTAAACAATTTGAAAGTCCTTTCCTTTCAGTTTCCTaGAATTCCAAGTCATCACAT +
Preference number: 5 (lower is better)
Translates to: RLRAWILTMLTAKQFESPFLSVS*NSKSSH
Trigger: ATGTGATGACTTGGAATTCAAGGAAACTGAAAGGAA...AGGACTTTCAAATTGTTTAGCAGTCAGCATAGTCAGGATCCAAGCCCGCAATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000477737.6
CDS-3UTR CAA 90 bp TATAAAAATGGAACTCTCCTCCAGTCAAAGCAGCAACCTCTTTCAAAAACCTGTGACTCATTCTCCGGTTaGGCTTTTATATCCACAACC +
Preference number: 5 (lower is better)
Translates to: YKNGTLLQSKQQPLSKTCDSFSG*AFISTT
Trigger: GGTTGTGGATATAAAAGCCAAACCGGAGAATGAGTC...ACAGGTTTTTGAAAGAGGTTGCTGCTTTGACTGGAGGAGAGTTCCATTTTTATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000433678.5
ENST00000448638.5
CDS-3UTR CAA 90 bp GAAAGGCCCCATGGTCCCTTCAACATATTCAGAGATGAAGTTTGTGTTGAATCGTCCAAATTATCTTCATaGACTTCAGCAAGTTGTTCC +
Preference number: 5 (lower is better)
Translates to: ERPHGPFNIFRDEVCVESSKLSS*TSASCS
Trigger: GGAACAACTTGCTGAAGTCAATGAAGATAATTTGGA...CGATTCAACACAAACTTCATCTCTGAATATGTTGAAGGGACCATGGGGCCTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
ENST00000495571.5
CDS-3UTR CAA 90 bp TTGGCTCCTTGGGGGTTAATTAATGTCATCTTATTTGTGTCGTTGCACACATGTCTCAGAATAAAGGTCTaGCATCTTCTCCAGATCACT +
Preference number: 5 (lower is better)
Translates to: LAPWGLINVILFVSLHTCLRIKV*HLLQIT
Trigger: AGTGATCTGGAGAAGATGCAAGACCTTTATTCTGAG...ACATGTGTGCAACGACACAAATAAGATGACATTAATTAACCCCCAAGGAGCCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000495571.5
CDS-3UTR CAA 90 bp AATGTAAGAGTTTTTATTCTGGTTTCGGGCTCAATTAGAGTTACCTACAACAGAAACAAGATTGCGGGCTaGGATCCTGACTATGCTGAC +
Preference number: 5 (lower is better)
Translates to: NVRVFILVSGSIRVTYNRNKIAG*DPDYAD
Trigger: GTCAGCATAGTCAGGATCCAAGCCCGCAATCTTGTT...TCTGTTGTAGGTAACTCTAATTGAGCCCGAAACCAGAATAAAAACTCTTACATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS CCA 90 bp AAATGTCCCTATCAAAATTCATGTCAATACATTGACATCCAAAAATaGATGGAGTCATCAGCTTGCGCGTACTTCACCTTGGAAAGTGTG +
Preference number: 5 (lower is better)
Translates to: KCPYQNSCQYIDIQK*MESSACAYFTLESV
Trigger: CACACTTTCCAAGGTGAAGTACGCGCAAGCTGATGACTCCATCCATTTTTGGATGTCAATGTATTGACATGAATTTTGATAGGGACATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463635.1
CDS-3UTR CAA 90 bp AATGGAACTCTCCTCCAGTCAAAGCAGCAACCTCTTTCAAAAACCTGTTTGCAATTCCTTTCAGTTTCCTaGAATTCCAAGTCATCACAT +
Preference number: 5 (lower is better)
Translates to: NGTLLQSKQQPLSKTCLQFLSVS*NSKSSH
Trigger: ATGTGATGACTTGGAATTCAAGGAAACTGAAAGGAA...TTGCAAACAGGTTTTTGAAAGAGGTTGCTGCTTTGACTGGAGGAGAGTTCCATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000433678.5
CDS-3UTR CAA 90 bp ACGTTTGACCTGGTCTATAACTGTTTCAGGTGGAATGATACACATGACAGTCTCTTCCTTTCAGTTTCCTaGAATTCCAAGTCATCACAT +
Preference number: 5 (lower is better)
Translates to: TFDLVYNCFRWNDTHDSLFLSVS*NSKSSH
Trigger: ATGTGATGACTTGGAATTCAAGGAAACTGAAAGGAA...GAGACTGTCATGTGTATCATTCCACCTGAAACAGTTATAGACCAGGTCAAACGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000433678.5
CDS-3UTR CAA 90 bp CAAAATTATAAAAATGGAACTCTCCTCCAGTCAAAGCAGCAACCTCTTTCAAAACCGCCAAGCAACTGCTaGACCATCAAACTTCACAAA +
Preference number: 5 (lower is better)
Translates to: QNYKNGTLLQSKQQPLSKPPSNC*TIKLHK
Trigger: TTTGTGAAGTTTGATGGTCAAGCAGTTGCTTGGCGG...TTTTGAAAGAGGTTGCTGCTTTGACTGGAGGAGAGTTCCATTTTTATAATTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000433678.5
ENST00000448638.5
ENST00000495571.5
CDS-3UTR CAA 90 bp CTTTATGTCTCTAATCCAGGACTGAGCCTGTTCCAAATTATCTTCATTGACTTCCTCAGAATAAAGGTCTaGCATCTTCTCCAGATCACT +
Preference number: 5 (lower is better)
Translates to: LYVSNPGLSLFQIIFIDFLRIKV*HLLQIT
Trigger: AGTGATCTGGAGAAGATGCAAGACCTTTATTCTGAG...GAAGTCAATGAAGATAATTTGGAACAGGCTCAGTCCTGGATTAGAGACATAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
CDS-3UTR CAA 90 bp GTGAGACGTGTCAATGAGAATGTAGATGCAATCATTATGCAATCTTCCAAAGAGAAGATGCTCATTTCTTaGTCACTTAGAGCAGTCCTC +
Preference number: 5 (lower is better)
Translates to: VRRVNENVDAIIMQSSKEKMLIS*SLRAVL
Trigger: GAGGACTGCTCTAAGTGACAAAGAAATGAGCATCTT...CTCTTTGGAAGATTGCATAATGATTGCATCTACATTCTCATTGACACGTCTCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416277.5
ENST00000432242.5
ENST00000448638.5
CDS-3UTR CAA 90 bp AATGTAAGAGTTTTTATTCTGGTTTCGGGCTCAATTAGAGTTACCTACAACAGAATCTTATTTGTGTCGTaGCACACATGTGCCAGAGGG +
Preference number: 5 (lower is better)
Translates to: NVRVFILVSGSIRVTYNRILFVS*HTCARG
Trigger: CCCTCTGGCACATGTGTGCAACGACACAAATAAGAT...TCTGTTGTAGGTAACTCTAATTGAGCCCGAAACCAGAATAAAAACTCTTACATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
ENST00000495571.5
ENST00000614454.1
CDS-3UTR CAA 90 bp TCAGTCTTGCAGATCTCAGACAAGTTACCGAGTCTGAATTTCAGTCCTAATATTGAGCGCATACTTGTTTaGGCTGATCTTAATAAGTGC +
Preference number: 5 (lower is better)
Translates to: SVLQISDKLPSLNFSPNIERILV*ADLNKC
Trigger: GCACTTATTAAGATCAGCCAAAACAAGTATGCGCTC...AATATTAGGACTGAAATTCAGACTCGGTAACTTGTCTGAGATCTGCAAGACTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CAA 90 bp ATGAAAATGTCAGGAAACTATACAGTAGGGGATGTTCAGTCTTGCAGATCTCAGCAAGAGAGCGCATACTaGTTTTGGCTGATCTTAATA +
Preference number: 5 (lower is better)
Translates to: MKMSGNYTVGDVQSCRSQQESAY*FWLILI
Trigger: TATTAAGATCAGCCAAAACAAGTATGCGCTCTCTTG...CTGAGATCTGCAAGACTGAACATCCCCTACTGTATAGTTTCCTGACATTTTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CAA 90 bp AATGTAAGAGTTTTTATTCTGGTTTCGGGCTCAATTAGAGTTACCTACAACAGACTGGATCCTCAGGAATaGGGGGTGACTTTATATGAG +
Preference number: 5 (lower is better)
Translates to: NVRVFILVSGSIRVTYNRLDPQE*GVTLYE
Trigger: CTCATATAAAGTCACCCCCAATTCCTGAGGATCCAG...TCTGTTGTAGGTAACTCTAATTGAGCCCGAAACCAGAATAAAAACTCTTACATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
ENST00000495571.5
ENST00000614454.1
CDS-3UTR CAA 90 bp ACGTTTGACCTGGTCTATAACTGTTTCAGGTGGAATGATACACATGACAGTCTCGTGATACTTGAATATTaGCTGTCTCCATCCTTTTCT +
Preference number: 5 (lower is better)
Translates to: TFDLVYNCFRWNDTHDSLVILEY*LSPSFS
Trigger: AGAAAAGGATGGAGACAGCAAATATTCAAGTATCAC...GAGACTGTCATGTGTATCATTCCACCTGAAACAGTTATAGACCAGGTCAAACGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433678.5
CDS TCA 90 bp TCAGGCCAGCTCATGAAATGTCAGTGTTCTAGCAAAAGCACAGGTTaGAACTTCTTGTCCCTAGTATCAAATTATTTAACAAAAGCCTCA +
Preference number: 5 (lower is better)
Translates to: SGQLMKCQCSSKSTG*NFLSLVSNYLTKAS
Trigger: TGAGGCTTTTGTTAAATAATTTGATACTAGGGACAAGAAGTTTCAACCTGTGCTTTTGCTAGAACACTGACATTTCATGAGCTGGCCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409460.5
CDS GCA 90 bp TTCAAATGTGATTGTGTTTCTCACTGCTTTAAATGTGGCTCTCATTaGCCTCAGGGTAAAGTGCAAATCCTTAATATGACCCTTTATGCA +
Preference number: 5 (lower is better)
Translates to: FKCDCVSHCFKCGSH*PQGKVQILNMTLYA
Trigger: TGCATAAAGGGTCATATTAAGGATTTGCACTTTACCCTGAGGGCAATGAGAGCCACATTTAAAGCAGTGAGAAACACAATCACATTTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409460.5
CDS-3UTR CAA 90 bp AAAACAAGATTGCGGGCTTGGATCCTGACTATGCTGACTGCTAAACAATTTGAATCCAAATTATCTTCATaGACTTCAGCAAGTTGTTCC +
Preference number: 5 (lower is better)
Translates to: KTRLRAWILTMLTAKQFESKLSS*TSASCS
Trigger: GGAACAACTTGCTGAAGTCAATGAAGATAATTTGGA...TTCAAATTGTTTAGCAGTCAGCATAGTCAGGATCCAAGCCCGCAATCTTGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432242.5
ENST00000477737.6
CDS-3UTR CAA 90 bp ATGAAAATGTCAGGAAACTATACAGTAGGGGATGTTCAGTCTTGCAGATCTCAGTTAATGTCATCTTATTaGTGTCGTTGCACACATGTG +
Preference number: 5 (lower is better)
Translates to: MKMSGNYTVGDVQSCRSQLMSSY*CRCTHV
Trigger: CACATGTGTGCAACGACACAAATAAGATGACATTAA...CTGAGATCTGCAAGACTGAACATCCCCTACTGTATAGTTTCCTGACATTTTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
CDS-3UTR CAA 90 bp GTAAGAGTTTTTATTCTGGTTTCGGGCTCAATTAGAGTTACCTACAACAGACTCCAAGAGAGCGCATACTaGTTTTGGCTGATCTTAATA +
Preference number: 5 (lower is better)
Translates to: VRVFILVSGSIRVTYNRLQESAY*FWLILI
Trigger: TATTAAGATCAGCCAAAACAAGTATGCGCTCTCTTG...GAGTCTGTTGTAGGTAACTCTAATTGAGCCCGAAACCAGAATAAAAACTCTTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000495571.5
ENST00000614454.1
CDS-3UTR CAA 90 bp AATGTAAGAGTTTTTATTCTGGTTTCGGGCTCAATTAGAGTTACCTACAACAGAATAACCTTCTGTCCTTaGAGGGGATCTGGTCTTTTT +
Preference number: 5 (lower is better)
Translates to: NVRVFILVSGSIRVTYNRITFCP*RGSGLF
Trigger: AAAAAGACCAGATCCCCTCAAAGGACAGAAGGTTAT...TCTGTTGTAGGTAACTCTAATTGAGCCCGAAACCAGAATAAAAACTCTTACATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
ENST00000495571.5
ENST00000614454.1
CDS-3UTR CAA 90 bp AATGTAAGAGTTTTTATTCTGGTTTCGGGCTCAATTAGAGTTACCTACAACAGAGAGCGCATACTTGTTTaGGCTGATCTTAATAAGTGC +
Preference number: 5 (lower is better)
Translates to: NVRVFILVSGSIRVTYNRERILV*ADLNKC
Trigger: GCACTTATTAAGATCAGCCAAAACAAGTATGCGCTC...TCTGTTGTAGGTAACTCTAATTGAGCCCGAAACCAGAATAAAAACTCTTACATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000432242.5
ENST00000473149.5
ENST00000477737.6
ENST00000489630.5
ENST00000495571.5
ENST00000614454.1
CDS CCA 72 bp ACCCTGGGCTCGGGGTGTGTCCCCTGGCAGGACCCATaGGAGCTGATGCCGTGGGAGGAGCCGTCCGAGTCC +
Preference number: 6 (lower is better)
Translates to: TLGSGCVPWQDP*ELMPWEEPSES
Trigger: GGACTCGGACGGCTCCTCCCACGGCATCAGCTCCCATGGGTCCTGCCAGGGGACACACCCCGAGCCCAGGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473149.5
CDS GCA 72 bp CTGGTGGATAAGGCAGCGATTCCGGCGGGCGAAGGCTaGGCGCCGGGGGCGAAGGATTCCAGCTGTTCTAGG +
Preference number: 6 (lower is better)
Translates to: LVDKAAIPAGEG*APGAKDSSCSR
Trigger: CCTAGAACAGCTGGAATCCTTCGCCCCCGGCGCGCAGCCTTCGCCCGCCGGAATCGCTGCCTTATCCACCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000432242.5
ENST00000433678.5
ENST00000448079.5
ENST00000477737.6
CDS TCA 72 bp GGGATCACATCCCCCAGGAAGTCTGGGGCAAACCTCTaGGGCCCAGCTATCCCAGTCTCATGGCCCTTCCTC +
Preference number: 6 (lower is better)
Translates to: GITSPRKSGANL*GPAIPVSWPFL
Trigger: GAGGAAGGGCCATGAGACTGGGATAGCTGGGCCTCAGAGGTTTGCCCCAGACTTCCTGGGGGATGTGATCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409460.5
CDS CAA 90 bp CTCCAACACACGTGTGCACTCCACCCTGAGGCCTGGGCACCGCTGTaGTTTCTGCTTAGAACTCCCTTCCCCAATCTCATGGCTTGCCCC +
Preference number: 6 (lower is better)
Translates to: LQHTCALHPEAWAPL*FLLRTPFPNLMACP
Trigger: GGGGCAAGCCATGAGATTGGGGAAGGGAGTTCTAAGCAGAAACAACAGCGGTGCCCAGGCCTCAGGGTGGAGTGCACACGTGTGTTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409460.5
CDS CAA 90 bp CAGCCTCTGGATCTGGGCCAGCGTGCTGCAGGCTTCCTCCATCTCTaGCCAAACGAGAAACACGTCCTCTCTGACTCCAGCTCAGTCTTG +
Preference number: 6 (lower is better)
Translates to: QPLDLGQRAAGFLHL*PNEKHVLSDSSSVL
Trigger: CAAGACTGAGCTGGAGTCAGAGAGGACGTGTTTCTCGTTTGGCAAGAGATGGAGGAAGCCTGCAGCACGCTGGCCCAGATCCAGAGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448638.5
CDS GCA 72 bp CACTCCACCCTGAGGCCTGGGCACCGCTGTTGTTTCTaGTTAGAACTCCCTTCCCCAATCTCATGGCTTGCC +
Preference number: 6 (lower is better)
Translates to: HSTLRPGHRCCF*LELPSPISWLA
Trigger: GGCAAGCCATGAGATTGGGGAAGGGAGTTCTAAGCAGAAACAACAGCGGTGCCCAGGCCTCAGGGTGGAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409460.5
CDS CCA 72 bp AGACGCCCGGCCGCGGGGAAGTGGAGGTGGGCTGTCTaGGGAAGCAGAGTTCAGCATTACTTAAGGATGTTA +
Preference number: 6 (lower is better)
Translates to: RRPAAGKWRWAV*GSRVQHYLRML
Trigger: TAACATCCTTAAGTAATGCTGAACTCTGCTTCCCCAGACAGCCCACCTCCACTTCCCCGCGGCCGGGCGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473149.5
CDS CAA 72 bp ACGTGTGCACTCCACCCTGAGGCCTGGGCACCGCTGTaGTTTCTGCTTAGAACTCCCTTCCCCAATCTCATG +
Preference number: 6 (lower is better)
Translates to: TCALHPEAWAPL*FLLRTPFPNLM
Trigger: CATGAGATTGGGGAAGGGAGTTCTAAGCAGAAACAACAGCGGTGCCCAGGCCTCAGGGTGGAGTGCACACGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409460.5
CDS CAA 72 bp CCACCCGAAGCCAGGGACCAGAGACATCCTAACCCCTaGGTATCCAATCTTCACACAGCAGTGGGAGAGAGC +
Preference number: 6 (lower is better)
Translates to: PPEARDQRHPNP*VSNLHTAVGES
Trigger: GCTCTCTCCCACTGCTGTGTGAAGATTGGATACCAAGGGGTTAGGATGTCTCTGGTCCCTGGCTTCGGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409460.5
CDS CAA 90 bp AAGAGATGCTCATTAGGAAGGCAGTACGCAGGTGTCCGTGCATGCTaGTTCCTTCTCCTGGGACTGAACGTGCTCTTCGGCAGCACTGGG +
Preference number: 6 (lower is better)
Translates to: KRCSLGRQYAGVRAC*FLLLGLNVLFGSTG
Trigger: CCCAGTGCTGCCGAAGAGCACGTTCAGTCCCAGGAGAAGGAACAAGCATGCACGGACACCTGCGTACTGCCTTCCTAATGAGCATCTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465930.1
CDS CCA 72 bp CACCCGAAGCCAGGGACCAGAGACATCCTAACCCCTTaGTATCCAATCTTCACACAGCAGTGGGAGAGAGCT +
Preference number: 6 (lower is better)
Translates to: HPKPGTRDILTP*YPIFTQQWERA
Trigger: AGCTCTCTCCCACTGCTGTGTGAAGATTGGATACCAAGGGGTTAGGATGTCTCTGGTCCCTGGCTTCGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409460.5
CDS CAA 72 bp TCATTAGGAAGGCAGTACGCAGGTGTCCGTGCATGCTaGTTCCTTCTCCTGGGACTGAACGTGCTCTTCGGC +
Preference number: 6 (lower is better)
Translates to: SLGRQYAGVRAC*FLLLGLNVLFG
Trigger: GCCGAAGAGCACGTTCAGTCCCAGGAGAAGGAACAAGCATGCACGGACACCTGCGTACTGCCTTCCTAATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465930.1
CDS TCA 72 bp CCCACCACACCCGCCCTGCAATGTAATCTTTTTGCCTaGCAGAGCTTCCTCAGGGTTTTCTCCCAGTTCCCT +
Preference number: 6 (lower is better)
Translates to: PTTPALQCNLFA*QSFLRVFSQFP
Trigger: AGGGAACTGGGAGAAAACCCTGAGGAAGCTCTGTCAGGCAAAAAGATTACATTGCAGGGCGGGTGTGGTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409460.5
CDS GCA 72 bp TGCTCATTAGGAAGGCAGTACGCAGGTGTCCGTGCATaGTTGTTCCTTCTCCTGGGACTGAACGTGCTCTTC +
Preference number: 6 (lower is better)
Translates to: CSLGRQYAGVRA*LFLLLGLNVLF
Trigger: GAAGAGCACGTTCAGTCCCAGGAGAAGGAACAAGCATGCACGGACACCTGCGTACTGCCTTCCTAATGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465930.1
CDS GCA 72 bp GAGATGCTCATTAGGAAGGCAGTACGCAGGTGTCCGTaGATGCTTGTTCCTTCTCCTGGGACTGAACGTGCT +
Preference number: 6 (lower is better)
Translates to: EMLIRKAVRRCP*MLVPSPGTERA
Trigger: AGCACGTTCAGTCCCAGGAGAAGGAACAAGCATGCACGGACACCTGCGTACTGCCTTCCTAATGAGCATCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465930.1
CDS CAA 90 bp GCCTTTCGTGGCCATTGTGTGCTTCAGTGTGATAGTAGCTCAGATTaGGCTTGTGTGCACCCACTCTCCGTCCTCTCCACATGCAGATCC +
Preference number: 6 (lower is better)
Translates to: AFRGHCVLQCDSSSD*ACVHPLSVLSTCRS
Trigger: GGATCTGCATGTGGAGAGGACGGAGAGTGGGTGCACACAAGCCAAATCTGAGCTACTATCACACTGAAGCACACAATGGCCACGAAAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490947.2
ENST00000614454.1
CDS GCA 72 bp ATGAAACTCCCTTCATACCTCCACCCCTTGCTGAATTaGAGCTGGCTGATTCCTTCAGGGATCACATCCCCC +
Preference number: 6 (lower is better)
Translates to: MKLPSYLHPLLN*SWLIPSGITSP
Trigger: GGGGGATGTGATCCCTGAAGGAATCAGCCAGCTGCAATTCAGCAAGGGGTGGAGGTATGAAGGGAGTTTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409460.5
CDS CCA 72 bp GAAGAACTTTGTCACTTAGAGCAGTCCTCCGGCTGCTaGCATTGGAGAGGCCATCCTTCCTTTCACTGCAAG +
Preference number: 6 (lower is better)
Translates to: EELCHLEQSSGC*HWRGHPSFHCK
Trigger: CTTGCAGTGAAAGGAAGGATGGCCTCTCCAATGCCAGCAGCCGGAGGACTGCTCTAAGTGACAAAGTTCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485216.1
CDS CAA 72 bp CATGAAACTCCCTTCATACCTCCACCCCTTGCTGAATaGCAGCTGGCTGATTCCTTCAGGGATCACATCCCC +
Preference number: 6 (lower is better)
Translates to: HETPFIPPPLAE*QLADSFRDHIP
Trigger: GGGGATGTGATCCCTGAAGGAATCAGCCAGCTGCAATTCAGCAAGGGGTGGAGGTATGAAGGGAGTTTCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409460.5
CDS CAA 72 bp TGTGACCCACCACACCCGCCCTGCAATGTAATCTTTTaGCCTGACAGAGCTTCCTCAGGGTTTTCTCCCAGT +
Preference number: 6 (lower is better)
Translates to: CDPPHPPCNVIF*PDRASSGFSPS
Trigger: ACTGGGAGAAAACCCTGAGGAAGCTCTGTCAGGCAAAAAGATTACATTGCAGGGCGGGTGTGGTGGGTCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409460.5
CDS TCA 72 bp CCATCCTGTAGCCATTTAATCCTTATCTCCCTTTGCTaGCTCTCTTTTCAGACTCAGCCCGCCTGCACCCAG +
Preference number: 6 (lower is better)
Translates to: PSCSHLILISLC*LSFQTQPACTQ
Trigger: CTGGGTGCAGGCGGGCTGAGTCTGAAAAGAGAGTCAGCAAAGGGAGATAAGGATTAAATGGCTACAGGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466852.1
ENST00000489968.5
CDS GCA 72 bp TTGGTGTTAATCCATCCCTCTTGCCTCTGCAGCTGCTaGTCAGAGATGGTAGAAGATGGGCCTGATTTCTCC +
Preference number: 6 (lower is better)
Translates to: LVLIHPSCLCSC*SEMVEDGPDFS
Trigger: GGAGAAATCAGGCCCATCTTCTACCATCTCTGAGCAGCAGCTGCAGAGGCAAGAGGGATGGATTAACACCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000409460.5
ENST00000416277.5
ENST00000422503.6
ENST00000432242.5
ENST00000433678.5
ENST00000448079.5
ENST00000448638.5
ENST00000477737.6
ENST00000483669.5
ENST00000484571.5
CDS CAA 72 bp TCACCATCCATGAAACTCCCTTCATACCTCCACCCCTaGCTGAATTGCAGCTGGCTGATTCCTTCAGGGATC +
Preference number: 6 (lower is better)
Translates to: SPSMKLPSYLHP*LNCSWLIPSGI
Trigger: GATCCCTGAAGGAATCAGCCAGCTGCAATTCAGCAAGGGGTGGAGGTATGAAGGGAGTTTCATGGATGGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409460.5
CDS CAA 90 bp GTATTATTGTCACCATCCATGAAACTCCCTTCATACCTCCACCCCTaGCTGAATTGCAGCTGGCTGATTCCTTCAGGGATCACATCCCCC +
Preference number: 6 (lower is better)
Translates to: VLLSPSMKLPSYLHP*LNCSWLIPSGITSP
Trigger: GGGGGATGTGATCCCTGAAGGAATCAGCCAGCTGCAATTCAGCAAGGGGTGGAGGTATGAAGGGAGTTTCATGGATGGTGACAATAATAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409460.5
CDS GCA 72 bp GTTTTGGTGTTAATCCATCCCTCTTGCCTCTGCAGCTaGTGCTCAGAGATGGTAGAAGATGGGCCTGATTTC +
Preference number: 6 (lower is better)
Translates to: VLVLIHPSCLCS*CSEMVEDGPDF
Trigger: GAAATCAGGCCCATCTTCTACCATCTCTGAGCAGCAGCTGCAGAGGCAAGAGGGATGGATTAACACCAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000409460.5
ENST00000416277.5
ENST00000422503.6
ENST00000432242.5
ENST00000433678.5
ENST00000448079.5
ENST00000448638.5
ENST00000477737.6
ENST00000483669.5
ENST00000484571.5
CDS GCA 72 bp AAGTCTGTTTTGGTGTTAATCCATCCCTCTTGCCTCTaGAGCTGCTGCTCAGAGATGGTAGAAGATGGGCCT +
Preference number: 6 (lower is better)
Translates to: KSVLVLIHPSCL*SCCSEMVEDGP
Trigger: AGGCCCATCTTCTACCATCTCTGAGCAGCAGCTGCAGAGGCAAGAGGGATGGATTAACACCAAAACAGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000409460.5
ENST00000416277.5
ENST00000422503.6
ENST00000432242.5
ENST00000433678.5
ENST00000448079.5
ENST00000448638.5
ENST00000477737.6
ENST00000483669.5
ENST00000484571.5
CDS CAA 90 bp AGCCATTTCTCAGATGAAATGAGACTCTGCTCAGCCAAGTCTGTTTaGGTGTTAATCCATCCCTCTTGCCTCTGCAGCTGCTGCTCAGAG +
Preference number: 6 (lower is better)
Translates to: SHFSDEMRLCSAKSV*VLIHPSCLCSCCSE
Trigger: CTCTGAGCAGCAGCTGCAGAGGCAAGAGGGATGGATTAACACCAAAACAGACTTGGCTGAGCAGAGTCTCATTTCATCTGAGAAATGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000409460.5
ENST00000416277.5
ENST00000422503.6
ENST00000432242.5
ENST00000433678.5
ENST00000448079.5
ENST00000448638.5
ENST00000477737.6
ENST00000483669.5
ENST00000484571.5
CDS GCA 72 bp GCAAAACAGTGGTGCCAACGGTTTATCTCCCTCACATaGCCTAGCTTGGTACTAGTCTCATCAGTAATACCC +
Preference number: 6 (lower is better)
Translates to: AKQWCQRFISLT*PSLVLVSSVIP
Trigger: GGGTATTACTGATGAGACTAGTACCAAGCTAGGGCATGTGAGGGAGATAAACCGTTGGCACCACTGTTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465930.1
CDS CAA 72 bp TCAGATGAAATGAGACTCTGCTCAGCCAAGTCTGTTTaGGTGTTAATCCATCCCTCTTGCCTCTGCAGCTGC +
Preference number: 6 (lower is better)
Translates to: SDEMRLCSAKSV*VLIHPSCLCSC
Trigger: GCAGCTGCAGAGGCAAGAGGGATGGATTAACACCAAAACAGACTTGGCTGAGCAGAGTCTCATTTCATCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000409460.5
ENST00000416277.5
ENST00000422503.6
ENST00000432242.5
ENST00000433678.5
ENST00000448079.5
ENST00000448638.5
ENST00000477737.6
ENST00000483669.5
ENST00000484571.5
CDS CAA 72 bp AGGTGTCTTCTGGATTCGATGCAATCTCAACAGAGGTaGTTTCTGACTCTGAGCGGGACAAGCCAGCATATC +
Preference number: 6 (lower is better)
Translates to: RCLLDSMQSQQR*FLTLSGTSQHI
Trigger: GATATGCTGGCTTGTCCCGCTCAGAGTCAGAAACAACCTCTGTTGAGATTGCATCGAATCCAGAAGACACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416277.5
CDS TCA 72 bp CAAGGAAGTATATGTCCACAGATTTTTGGTGGCAGCTaGAAAGGTCCCCCAGACCCATTTCCAGCATTTGCT +
Preference number: 6 (lower is better)
Translates to: QGSICPQIFGGS*KGPPDPFPAFA
Trigger: AGCAAATGCTGGAAATGGGTCTGGGGGACCTTTTCAGCTGCCACCAAAAATCTGTGGACATATACTTCCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000466852.1
CDS TCA 72 bp CTACACACTCTGTTCTCTCGGCAAATGCGTGGAATCTaGAACGTGAAGAGATGCTCATTAGGAAGGCAGTAC +
Preference number: 6 (lower is better)
Translates to: LHTLFSRQMRGI*NVKRCSLGRQY
Trigger: GTACTGCCTTCCTAATGAGCATCTCTTCACGTTTCAGATTCCACGCATTTGCCGAGAGAACAGAGTGTGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465930.1
CDS GCA 72 bp GTGGATTTCAACCTCATGCCTTTCGTGGCCATTGTGTaGTTCAGTGTGATAGTAGCTCAGATTTGGCTTGTG +
Preference number: 6 (lower is better)
Translates to: VDFNLMPFVAIV*FSVIVAQIWLV
Trigger: CACAAGCCAAATCTGAGCTACTATCACACTGAAGCACACAATGGCCACGAAAGGCATGAGGTTGAAATCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490947.2
ENST00000614454.1
CDS CAA 72 bp ATCTGGGCATCTTGCAGGCACCTGCAATTCATCATGTaGCAGACACATCTCATTGTCTTTCCATCCACACCA +
Preference number: 6 (lower is better)
Translates to: IWASCRHLQFIM*QTHLIVFPSTP
Trigger: TGGTGTGGATGGAAAGACAATGAGATGTGTCTGCAACATGATGAATTGCAGGTGCCTGCAAGATGCCCAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409460.5
CDS TCA 72 bp GCTCTTAAGCCCATGCAGTTGAAGCCATTTCTCAGATaGAATGAGACTCTGCTCAGCCAAGTCTGTTTTGGT +
Preference number: 6 (lower is better)
Translates to: ALKPMQLKPFLR*NETLLSQVCFG
Trigger: ACCAAAACAGACTTGGCTGAGCAGAGTCTCATTTCATCTGAGAAATGGCTTCAACTGCATGGGCTTAAGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000409460.5
ENST00000416277.5
ENST00000422503.6
ENST00000432242.5
ENST00000433678.5
ENST00000448079.5
ENST00000448638.5
ENST00000477737.6
ENST00000483669.5
ENST00000484571.5
CDS GCA 72 bp TTTCTGCTTAGAACTCCCTTCCCCAATCTCATGGCTTaGCCCACCTCCTTTAAGTCCTTATTCATATGTCAC +
Preference number: 6 (lower is better)
Translates to: FLLRTPFPNLMA*PTSFKSLFICH
Trigger: GTGACATATGAATAAGGACTTAAAGGAGGTGGGGCAAGCCATGAGATTGGGGAAGGGAGTTCTAAGCAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409460.5
CDS CCA 72 bp ACCCACATCTCCAATTGCTTCTCTGATATCTTCATCTaGGCATCTTGCAGGCACCTGCAATTCATCATGTTG +
Preference number: 6 (lower is better)
Translates to: THISNCFSDIFI*ASCRHLQFIML
Trigger: CAACATGATGAATTGCAGGTGCCTGCAAGATGCCCAGATGAAGATATCAGAGAAGCAATTGGAGATGTGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409460.5
CDS CAA 72 bp TGGTGCCAACGGTTTATCTCCCTCACATGCCCTAGCTaGGTACTAGTCTCATCAGTAATACCCATTCTACAA +
Preference number: 6 (lower is better)
Translates to: WCQRFISLTCPS*VLVSSVIPILQ
Trigger: TTGTAGAATGGGTATTACTGATGAGACTAGTACCAAGCTAGGGCATGTGAGGGAGATAAACCGTTGGCACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465930.1
CDS GCA 72 bp TCTCTGATATCTTCATCTGGGCATCTTGCAGGCACCTaGAATTCATCATGTTGCAGACACATCTCATTGTCT +
Preference number: 6 (lower is better)
Translates to: SLISSSGHLAGT*NSSCCRHISLS
Trigger: AGACAATGAGATGTGTCTGCAACATGATGAATTGCAGGTGCCTGCAAGATGCCCAGATGAAGATATCAGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409460.5
CDS GCA 72 bp CAAAGTAGTAAATGGATTCAATCTGCAAAACAGTGGTaGCAACGGTTTATCTCCCTCACATGCCCTAGCTTG +
Preference number: 6 (lower is better)
Translates to: QSSKWIQSAKQW*QRFISLTCPSL
Trigger: CAAGCTAGGGCATGTGAGGGAGATAAACCGTTGGCACCACTGTTTTGCAGATTGAATCCATTTACTACTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465930.1
CDS CCA 72 bp GGAAATTCTACACACTCTGTTCTCTCGGCAAATGCGTaGAATCTGAAACGTGAAGAGATGCTCATTAGGAAG +
Preference number: 6 (lower is better)
Translates to: GNSTHSVLSANA*NLKREEMLIRK
Trigger: CTTCCTAATGAGCATCTCTTCACGTTTCAGATTCCACGCATTTGCCGAGAGAACAGAGTGTGTAGAATTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465930.1
CDS CAA 72 bp GTACCTGATCAGGTCTCCCATCGGTCAGAAGGTAGATaGCCTGTGTTTCTTTATCAGCAAAAGCAGTTTTCA +
Preference number: 6 (lower is better)
Translates to: VPDQVSHRSEGR*PVFLYQQKQFS
Trigger: TGAAAACTGCTTTTGCTGATAAAGAAACACAGGCAATCTACCTTCTGACCGATGGGAGACCTGATCAGGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466852.1
CDS CAA 72 bp CCTTGGGGGTTAATTAATGTCATCTTATTTGTGTCGTaGCACACATGTGCCAGAGGGAACACCTCATTTCCA +
Preference number: 6 (lower is better)
Translates to: PWGLINVILFVS*HTCARGNTSFP
Trigger: TGGAAATGAGGTGTTCCCTCTGGCACATGTGTGCAACGACACAAATAAGATGACATTAATTAACCCCCAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000465555.1
CDS CAA 72 bp TCCAGGTACCTGGAGGGAGTTTTCCTTTCAGTTTCCTaGAATTCCAAGTCATCACATTGTCACCATCCTTTG +
Preference number: 6 (lower is better)
Translates to: SRYLEGVFLSVS*NSKSSHCHHPL
Trigger: CAAAGGATGGTGACAATGTGATGACTTGGAATTCAAGGAAACTGAAAGGAAAACTCCCTCCAGGTACCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465930.1
CDS CAA 72 bp CCTTGGGGGTTAATTAATGTCATCTTATTTGTGTCGTaGCACACATGTGCCAGAGGGAACACCTCTTTTGTG +
Preference number: 6 (lower is better)
Translates to: PWGLINVILFVS*HTCARGNTSFV
Trigger: CACAAAAGAGGTGTTCCCTCTGGCACATGTGTGCAACGACACAAATAAGATGACATTAATTAACCCCCAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000490947.2
ENST00000614454.1
CDS CAA 90 bp CTTTTGGATTCCAGGTACCTGGAGGGAGTTTTCCTTTCAGTTTCCTaGAATTCCAAGTCATCACATTGTCACCATCCTTTGTGGAGAATG +
Preference number: 6 (lower is better)
Translates to: LLDSRYLEGVFLSVS*NSKSSHCHHPLWRM
Trigger: CATTCTCCACAAAGGATGGTGACAATGTGATGACTTGGAATTCAAGGAAACTGAAAGGAAAACTCCCTCCAGGTACCTGGAATCCAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465930.1
CDS CAA 90 bp AGTTTGGCTCCTTGGGGGTTAATTAATGTCATCTTATTTGTGTCGTaGCACACATGTGCCAGAGGGAACACCTCTTTTGTGGATTTCAAC +
Preference number: 6 (lower is better)
Translates to: SLAPWGLINVILFVS*HTCARGNTSFVDFN
Trigger: GTTGAAATCCACAAAAGAGGTGTTCCCTCTGGCACATGTGTGCAACGACACAAATAAGATGACATTAATTAACCCCCAAGGAGCCAAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000490947.2
ENST00000614454.1
CDS TCA 72 bp TTCAAGGTCAATTTGTTGCTCTTAAGCCCATGCAGTTaGAGCCATTTCTCAGATGAAATGAGACTCTGCTCA +
Preference number: 6 (lower is better)
Translates to: FKVNLLLLSPCS*SHFSDEMRLCS
Trigger: TGAGCAGAGTCTCATTTCATCTGAGAAATGGCTTCAACTGCATGGGCTTAAGAGCAACAAATTGACCTTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000409460.5
ENST00000416277.5
ENST00000422503.6
ENST00000432242.5
ENST00000433678.5
ENST00000448079.5
ENST00000448638.5
ENST00000477737.6
ENST00000483669.5
ENST00000484571.5
CDS GCA 72 bp GATTGTGTTTCTCACTGCTTTAAATGTGGCTCTCATTaGCCTCAGGGTAAAGTGCAAATCCTTAATATGACC +
Preference number: 6 (lower is better)
Translates to: DCVSHCFKCGSH*PQGKVQILNMT
Trigger: GGTCATATTAAGGATTTGCACTTTACCCTGAGGGCAATGAGAGCCACATTTAAAGCAGTGAGAAACACAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409460.5
CDS CCA 72 bp AAAATTCATGTCAATACATTGACATCCAAAAATGGATaGAGTCATCAGCTTGCGCGTACTTCACCTTGGAAA +
Preference number: 6 (lower is better)
Translates to: KIHVNTLTSKNG*SHQLARTSPWK
Trigger: TTTCCAAGGTGAAGTACGCGCAAGCTGATGACTCCATCCATTTTTGGATGTCAATGTATTGACATGAATTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463635.1
CDS CAA 72 bp ATGTCTTTCTTCATTTCTAAGTCTTCACACGTATTATaGTCACCATCCATGAAACTCCCTTCATACCTCCAC +
Preference number: 6 (lower is better)
Translates to: MSFFISKSSHVL*SPSMKLPSYLH
Trigger: GTGGAGGTATGAAGGGAGTTTCATGGATGGTGACAATAATACGTGTGAAGACTTAGAAATGAAGAAAGACAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409460.5
CDS TCA 72 bp CTCATGAAATGTCAGTGTTCTAGCAAAAGCACAGGTTaGAACTTCTTGTCCCTAGTATCAAATTATTTAACA +
Preference number: 6 (lower is better)
Translates to: LMKCQCSSKSTG*NFLSLVSNYLT
Trigger: TGTTAAATAATTTGATACTAGGGACAAGAAGTTTCAACCTGTGCTTTTGCTAGAACACTGACATTTCATGAG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409460.5