Pregenerated sensors for VTN (Homo sapiens)
Ensembl gene IDs: ENSG00000109072Ensembl transcript IDs: ENST00000226218.9, ENST00000539746.1, ENST00000542029.1
Found 52 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | ACAAGGACAGCCACGTGGCGCGGGATGGCCGGCGGGAGTTCTGGTTaGGGCCACGGCTGTGGCCTCGTTGTGAACGGTAGCCTTTGCGGT | + |
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Preference number: 5 (lower is better) Translates to: TRTATWRGMAGGSSG*GHGCGLVVNGSLCG Trigger: ACCGCAAAGGCTACCGTTCACAACGAGGCCACAGCCGTGGCCGCAACCAGAACTCCCGCCGGCCATCCCGCGCCACGTGGCTGTCCTTGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000226218.9 |
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| CDS CCA 90 bp | GTTGCTCTCCTCACTGGAGAACAAGGACAGCCACGTGGCGCGGGATaGCCGGCGGGAGTTCTGGTTGCGGCCACGGCTGTGGCCTCGTTG | + |
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Preference number: 5 (lower is better) Translates to: VALLTGEQGQPRGAG*PAGVLVAATAVASL Trigger: CAACGAGGCCACAGCCGTGGCCGCAACCAGAACTCCCGCCGGCCATCCCGCGCCACGTGGCTGTCCTTGTTCTCCAGTGAGGAGAGCAAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000226218.9 |
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| CDS GCA 90 bp | GTTTCTTGGCCAAGGAGGGGCGGGGTGCCATGCCTGAGATGTAGATaGGGCCAGCCATGGCTGCGTCCACTTGCCCTGGCACACCGTGCC | + |
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Preference number: 5 (lower is better) Translates to: VSWPRRGGVPCLRCR*GQPWLRPLALAHRA Trigger: GGCACGGTGTGCCAGGGCAAGTGGACGCAGCCATGGCTGGCCGCATCTACATCTCAGGCATGGCACCCCGCCCCTCCTTGGCCAAGAAAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000226218.9 ENST00000539746.1 |
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| CDS CCA 90 bp | TGGCTCCCAAGTTGCTCTCCTCACTGGAGAACAAGGACAGCCACGTaGCGCGGGATGGCCGGCGGGAGTTCTGGTTGCGGCCACGGCTGT | + |
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Preference number: 5 (lower is better) Translates to: WLPSCSPHWRTRTAT*RGMAGGSSGCGHGC Trigger: ACAGCCGTGGCCGCAACCAGAACTCCCGCCGGCCATCCCGCGCCACGTGGCTGTCCTTGTTCTCCAGTGAGGAGAGCAACTTGGGAGCCA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000226218.9 |
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| CDS CCA 90 bp | CCTACAGATGGCCAGGAGCTGGGCAGCCCAGCCAGTACTGAGCGATaGAGCGTGGGTAGGGAGGGTCCACAGTGTCCACTCGCCGTGTGC | + |
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Preference number: 5 (lower is better) Translates to: PTDGQELGSPASTER*SVGREGPQCPLAVC Trigger: GCACACGGCGAGTGGACACTGTGGACCCTCCCTACCCACGCTCCATCGCTCAGTACTGGCTGGGCTGCCCAGCTCCTGGCCATCTGTAGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000226218.9 |
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| CDS TCA 90 bp | CTCTGCTGGGGGCTGAGGTCTCCCTGGATGAAGGGTCTCAGGCCTTaGGTCTATCCCCTCAGGCTTAGAGGCGCCCACCTCAGGCGCAGG | + |
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Preference number: 5 (lower is better) Translates to: LCWGLRSPWMKGLRP*VYPLRLRGAHLRRR Trigger: CCTGCGCCTGAGGTGGGCGCCTCTAAGCCTGAGGGGATAGACTCAAGGCCTGAGACCCTTCATCCAGGGAGACCTCAGCCCCCAGCAGAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000226218.9 |
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| CDS CCA 90 bp | ATGGCCAGGAGCTGGGCAGCCCAGCCAGTACTGAGCGATGGAGCGTaGGTAGGGAGGGTCCACAGTGTCCACTCGCCGTGTGCGAAGATT | + |
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Preference number: 5 (lower is better) Translates to: MARSWAAQPVLSDGA*VGRVHSVHSPCAKI Trigger: AATCTTCGCACACGGCGAGTGGACACTGTGGACCCTCCCTACCCACGCTCCATCGCTCAGTACTGGCTGGGCTGCCCAGCTCCTGGCCAT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000226218.9 |
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| CDS TCA 90 bp | CTGCTCCACTGCCTGCTCAGTCTCCCACCACCCCCTGAGTACCCTTaGAGAAGTAGACCCGCTCCCGGCCACTGTAGCTATGGGCAGGGA | + |
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Preference number: 5 (lower is better) Translates to: LLHCLLSLPPPPEYP*RSRPAPGHCSYGQG Trigger: TCCCTGCCCATAGCTACAGTGGCCGGGAGCGGGTCTACTTCTTCAAGGGTACTCAGGGGGTGGTGGGAGACTGAGCAGGCAGTGGAGCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000539746.1 |
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| CDS TCA 90 bp | CTGACTGGGCTGGTGCTGGAACTGGTACTCCCAGTACTGTTTCCCTaGGGAGCAGGGTGGTGGGCATTAGGAGGGCTGGGCCAGGGCAAG | + |
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Preference number: 5 (lower is better) Translates to: LTGLVLELVLPVLFP*GAGWWALGGLGQGK Trigger: CTTGCCCTGGCCCAGCCCTCCTAATGCCCACCACCCTGCTCCTCAGGGAAACAGTACTGGGAGTACCAGTTCCAGCACCAGCCCAGTCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000539746.1 |
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| CDS GCA 90 bp | AGCAACCCATGCCAGCAGGGCCAGTATGAGAAGGGGTCTCAGGGGTaGCATGGCAGGGCTTCTAGCTCAGTGCCTGGCAAGCTGGGCTCT | + |
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Preference number: 5 (lower is better) Translates to: SNPCQQGQYEKGSQG*HGRASSSVPGKLGS Trigger: AGAGCCCAGCTTGCCAGGCACTGAGCTAGAAGCCCTGCCATGGCACCCCTGAGACCCCTTCTCATACTGGCCCTGCTGGCATGGGTTGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000226218.9 ENST00000542029.1 |
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| CDS GCA 90 bp | ACCTCAGGCGCAGGGGCCTCTTCCTCAGGTTTCAGAACAGGTGTCTaGTCAGGATTCCCTTTGGACTGGGCCTGGAGGTCAGAGGTCAGG | + |
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Preference number: 5 (lower is better) Translates to: TSGAGASSSGFRTGV*SGFPLDWAWRSEVR Trigger: CCTGACCTCTGACCTCCAGGCCCAGTCCAAAGGGAATCCTGAGCAGACACCTGTTCTGAAACCTGAGGAAGAGGCCCCTGCGCCTGAGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000226218.9 |
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| CDS CCA 90 bp | AGGAGCAGGGTGGTGGGCATTAGGAGGGCTGGGCCAGGGCAAGACTaGAGATCCCAGAGGCTGTTGAAGTTAGGATCTCCCAGCATGAGG | + |
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Preference number: 5 (lower is better) Translates to: RSRVVGIRRAGPGQD*RSQRLLKLGSPSMR Trigger: CCTCATGCTGGGAGATCCTAACTTCAACAGCCTCTGGGATCTCCAGTCTTGCCCTGGCCCAGCCCTCCTAATGCCCACCACCCTGCTCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000539746.1 |
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| CDS TCA 90 bp | TGGCCGGCGGGAGTTCTGGTTGCGGCCACGGCTGTGGCCTCGTTGTaGACGGTAGCCTTTGCGGTTGCGATGCCTAAACCTTTGTTTCTT | + |
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Preference number: 5 (lower is better) Translates to: WPAGVLVAATAVASL*TVAFAVAMPKPLFL Trigger: AAGAAACAAAGGTTTAGGCATCGCAACCGCAAAGGCTACCGTTCACAACGAGGCCACAGCCGTGGCCGCAACCAGAACTCCCGCCGGCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000226218.9 |
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| CDS CCA 90 bp | TCCTGTAGTCATCATAGTTGTTGGCTCCCAAGTTGCTCTCCTCACTaGAGAACAAGGACAGCCACGTGGCGCGGGATGGCCGGCGGGAGT | + |
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Preference number: 5 (lower is better) Translates to: SCSHHSCWLPSCSPH*RTRTATWRGMAGGS Trigger: ACTCCCGCCGGCCATCCCGCGCCACGTGGCTGTCCTTGTTCTCCAGTGAGGAGAGCAACTTGGGAGCCAACAACTATGATGACTACAGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000226218.9 |
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| CDS GCA 90 bp | CCCGCTGCATCATGGCAAAGTGTTCAAACACAGCCGACAGGGAGCTaGCTTCACACTCCTCCTGACTGGGCTGGTGCTGGAACTGGTACT | + |
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Preference number: 5 (lower is better) Translates to: PAASWQSVQTQPTGS*LHTPPDWAGAGTGT Trigger: AGTACCAGTTCCAGCACCAGCCCAGTCAGGAGGAGTGTGAAGGCAGCTCCCTGTCGGCTGTGTTTGAACACTTTGCCATGATGCAGCGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000226218.9 ENST00000539746.1 |
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| CDS GCA 90 bp | CTGCCCCAGAAGAGAAGCTCGAAGATGTCCTCCCAGCTGTCCCGCTaGATCATGGCAAAGTGTTCAAACACAGCCGACAGGGAGCTGCCT | + |
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Preference number: 5 (lower is better) Translates to: LPQKRSSKMSSQLSR*IMAKCSNTADRELP Trigger: AGGCAGCTCCCTGTCGGCTGTGTTTGAACACTTTGCCATGATGCAGCGGGACAGCTGGGAGGACATCTTCGAGCTTCTCTTCTGGGGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000226218.9 ENST00000539746.1 |
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| CDS CCA 90 bp | GTTCAAACACAGCCGACAGGGAGCTGCCTTCACACTCCTCCTGACTaGGCTGGTGCTGGAACTGGTACTCCCAGTACTGTTTCCCTGAGG | + |
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Preference number: 5 (lower is better) Translates to: VQTQPTGSCLHTPPD*AGAGTGTPSTVSLR Trigger: CCTCAGGGAAACAGTACTGGGAGTACCAGTTCCAGCACCAGCCCAGTCAGGAGGAGTGTGAAGGCAGCTCCCTGTCGGCTGTGTTTGAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000539746.1 |
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| CDS TCA 90 bp | GGTAGTAAGAGCAGAGCTCGTCACACTGGCACTTCTTGTCCACGTTaGAGCCCTCAGTGCAGCGGCCCTTGCATGACTCTTGGTCAGCCA | + |
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Preference number: 5 (lower is better) Translates to: GSKSRARHTGTSCPR*SPQCSGPCMTLGQP Trigger: TGGCTGACCAAGAGTCATGCAAGGGCCGCTGCACTGAGGGCTTCAACGTGGACAAGAAGTGCCAGTGTGACGAGCTCTGCTCTTACTACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000226218.9 ENST00000542029.1 |
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| CDS TCA 90 bp | AAGTGTTCAAACACAGCCGACAGGGAGCTGCCTTCACACTCCTCCTaGCTGGGCTGGTGCTGGAACTGGTACTCCCAGTACTGTTTCCCC | + |
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Preference number: 5 (lower is better) Translates to: KCSNTADRELPSHSS*LGWCWNWYSQYCFP Trigger: GGGGAAACAGTACTGGGAGTACCAGTTCCAGCACCAGCCCAGTCAGGAGGAGTGTGAAGGCAGCTCCCTGTCGGCTGTGTTTGAACACTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000226218.9 |
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| CDS TCA 90 bp | AAGTGTTCAAACACAGCCGACAGGGAGCTGCCTTCACACTCCTCCTaGCTGGGCTGGTGCTGGAACTGGTACTCCCAGTACTGTTTCCCT | + |
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Preference number: 5 (lower is better) Translates to: KCSNTADRELPSHSS*LGWCWNWYSQYCFP Trigger: AGGGAAACAGTACTGGGAGTACCAGTTCCAGCACCAGCCCAGTCAGGAGGAGTGTGAAGGCAGCTCCCTGTCGGCTGTGTTTGAACACTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000539746.1 |
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| CDS GCA 90 bp | CAAGCCAGTCCATCCTGTAGTCATCATAGTTGTTGGCTCCCAAGTTaGTCTCCTCACTGGAGAACAAGGACAGCCACGTGGCGCGGGATG | + |
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Preference number: 5 (lower is better) Translates to: QASPSCSHHSCWLPS*SPHWRTRTATWRGM Trigger: CATCCCGCGCCACGTGGCTGTCCTTGTTCTCCAGTGAGGAGAGCAACTTGGGAGCCAACAACTATGATGACTACAGGATGGACTGGCTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000226218.9 |
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| CDS CCA 90 bp | AGAAGAGAAGCTCGAAGATGTCCTCCCAGCTGTCCCGCTGCATCATaGCAAAGTGTTCAAACACAGCCGACAGGGAGCTGCCTTCACACT | + |
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Preference number: 5 (lower is better) Translates to: RREARRCPPSCPAAS*QSVQTQPTGSCLHT Trigger: AGTGTGAAGGCAGCTCCCTGTCGGCTGTGTTTGAACACTTTGCCATGATGCAGCGGGACAGCTGGGAGGACATCTTCGAGCTTCTCTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000226218.9 ENST00000539746.1 |
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| CDS CCA 90 bp | AGGTGGCAGGCACAAGCCAGTCCATCCTGTAGTCATCATAGTTGTTaGCTCCCAAGTTGCTCTCCTCACTGGAGAACAAGGACAGCCACG | + |
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Preference number: 5 (lower is better) Translates to: RWQAQASPSCSHHSC*LPSCSPHWRTRTAT Trigger: CGTGGCTGTCCTTGTTCTCCAGTGAGGAGAGCAACTTGGGAGCCAACAACTATGATGACTACAGGATGGACTGGCTTGTGCCTGCCACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000226218.9 |
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| CDS GCA 90 bp | AGTCTCCGCTCTGATGCTCCCTTCTTGCCGCCCCAATCCAACTTCTaGTCCATCCTTCATTCTGGTTCTTGCAACAGGCCAGACATGATC | + |
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Preference number: 5 (lower is better) Translates to: SLRSDAPFLPPQSNF*SILHSGSCNRPDMI Trigger: GATCATGTCTGGCCTGTTGCAAGAACCAGAATGAAGGATGGAGCAGAAGTTGGATTGGGGCGGCAAGAAGGGAGCATCAGAGCGGAGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000542029.1 |
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| CDS CCA 90 bp | ACTTGTCTCCAGAGAAGAAGAAGACACTCTGGATGGGTTCACAGGTaGCAGGCACAAGCCAGTCCATCCTGTAGTCATCATAGTTGTTGG | + |
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Preference number: 5 (lower is better) Translates to: TCLQRRRRHSGWVHR*QAQASPSCSHHSCW Trigger: CCAACAACTATGATGACTACAGGATGGACTGGCTTGTGCCTGCCACCTGTGAACCCATCCAGAGTGTCTTCTTCTTCTCTGGAGACAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000226218.9 |
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| CDS GCA 72 bp | GCCACGTGGCGCGGGATGGCCGGCGGGAGTTCTGGTTaGGGCCACGGCTGTGGCCTCGTTGTGAACGGTAGC | + |
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Preference number: 6 (lower is better) Translates to: ATWRGMAGGSSG*GHGCGLVVNGS Trigger: GCTACCGTTCACAACGAGGCCACAGCCGTGGCCGCAACCAGAACTCCCGCCGGCCATCCCGCGCCACGTGGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000226218.9 |
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| CDS CCA 72 bp | GACAGCCACGTGGCGCGGGATGGCCGGCGGGAGTTCTaGTTGCGGCCACGGCTGTGGCCTCGTTGTGAACGG | + |
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Preference number: 6 (lower is better) Translates to: DSHVARDGRREF*LRPRLWPRCER Trigger: CCGTTCACAACGAGGCCACAGCCGTGGCCGCAACCAGAACTCCCGCCGGCCATCCCGCGCCACGTGGCTGTC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000226218.9 |
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| CDS CCA 72 bp | CTCACTGGAGAACAAGGACAGCCACGTGGCGCGGGATaGCCGGCGGGAGTTCTGGTTGCGGCCACGGCTGTG | + |
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Preference number: 6 (lower is better) Translates to: LTGEQGQPRGAG*PAGVLVAATAV Trigger: CACAGCCGTGGCCGCAACCAGAACTCCCGCCGGCCATCCCGCGCCACGTGGCTGTCCTTGTTCTCCAGTGAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000226218.9 |
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| CDS TCA 72 bp | AGGAGGGAGCTACAGAGGGCCCGGCCATGTGGGCTCTaGCTCCTACAGATGGCCAGGAGCTGGGCAGCCCAG | + |
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Preference number: 6 (lower is better) Translates to: RRELQRARPCGL*LLQMARSWAAQ Trigger: CTGGGCTGCCCAGCTCCTGGCCATCTGTAGGAGTCAGAGCCCACATGGCCGGGCCCTCTGTAGCTCCCTCCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000226218.9 |
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| CDS GCA 72 bp | CCAAGGAGGGGCGGGGTGCCATGCCTGAGATGTAGATaGGGCCAGCCATGGCTGCGTCCACTTGCCCTGGCA | + |
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Preference number: 6 (lower is better) Translates to: PRRGGVPCLRCR*GQPWLRPLALA Trigger: TGCCAGGGCAAGTGGACGCAGCCATGGCTGGCCGCATCTACATCTCAGGCATGGCACCCCGCCCCTCCTTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000226218.9 ENST00000539746.1 |
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| CDS CCA 72 bp | AGTTGCTCTCCTCACTGGAGAACAAGGACAGCCACGTaGCGCGGGATGGCCGGCGGGAGTTCTGGTTGCGGC | + |
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Preference number: 6 (lower is better) Translates to: SCSPHWRTRTAT*RGMAGGSSGCG Trigger: GCCGCAACCAGAACTCCCGCCGGCCATCCCGCGCCACGTGGCTGTCCTTGTTCTCCAGTGAGGAGAGCAACT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000226218.9 |
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| CDS CCA 72 bp | AGCTGGGCAGCCCAGCCAGTACTGAGCGATGGAGCGTaGGTAGGGAGGGTCCACAGTGTCCACTCGCCGTGT | + |
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Preference number: 6 (lower is better) Translates to: SWAAQPVLSDGA*VGRVHSVHSPC Trigger: ACACGGCGAGTGGACACTGTGGACCCTCCCTACCCACGCTCCATCGCTCAGTACTGGCTGGGCTGCCCAGCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000226218.9 |
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| CDS GCA 72 bp | CCAGCCATGGCTGCGTCCACTTGCCCTGGCACACCGTaGCAGTCCCGGCTAATGAACTGGGGCTGTCTGGTA | + |
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Preference number: 6 (lower is better) Translates to: PAMAASTCPGTP*QSRLMNWGCLV Trigger: TACCAGACAGCCCCAGTTCATTAGCCGGGACTGGCACGGTGTGCCAGGGCAAGTGGACGCAGCCATGGCTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000226218.9 ENST00000539746.1 |
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| CDS TCA 72 bp | GGGCTGAGGTCTCCCTGGATGAAGGGTCTCAGGCCTTaGGTCTATCCCCTCAGGCTTAGAGGCGCCCACCTC | + |
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Preference number: 6 (lower is better) Translates to: GLRSPWMKGLRP*VYPLRLRGAHL Trigger: GAGGTGGGCGCCTCTAAGCCTGAGGGGATAGACTCAAGGCCTGAGACCCTTCATCCAGGGAGACCTCAGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000226218.9 |
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| CDS GCA 72 bp | GGTCTCAGGGGTGCCATGGCAGGGCTTCTAGCTCAGTaGCTGGCAAGCTGGGCTCTGGTCTCCCTGAAGTCT | + |
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Preference number: 6 (lower is better) Translates to: GLRGAMAGLLAQ*LASWALVSLKS Trigger: AGACTTCAGGGAGACCAGAGCCCAGCTTGCCAGGCACTGAGCTAGAAGCCCTGCCATGGCACCCCTGAGACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000226218.9 ENST00000542029.1 |
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| CDS TCA 72 bp | CTGGTGCTGGAACTGGTACTCCCAGTACTGTTTCCCTaGGGAGCAGGGTGGTGGGCATTAGGAGGGCTGGGC | + |
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Preference number: 6 (lower is better) Translates to: LVLELVLPVLFP*GAGWWALGGLG Trigger: GCCCAGCCCTCCTAATGCCCACCACCCTGCTCCTCAGGGAAACAGTACTGGGAGTACCAGTTCCAGCACCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000539746.1 |
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| CDS TCA 72 bp | AACACAGCCGACAGGGAGCTGCCTTCACACTCCTCCTaGCTGGGCTGGTGCTGGAACTGGTACTCCCAGTAC | + |
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Preference number: 6 (lower is better) Translates to: NTADRELPSHSS*LGWCWNWYSQY Trigger: GTACTGGGAGTACCAGTTCCAGCACCAGCCCAGTCAGGAGGAGTGTGAAGGCAGCTCCCTGTCGGCTGTGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000226218.9 ENST00000539746.1 |
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| CDS TCA 72 bp | GGAGTTCTGGTTGCGGCCACGGCTGTGGCCTCGTTGTaGACGGTAGCCTTTGCGGTTGCGATGCCTAAACCT | + |
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Preference number: 6 (lower is better) Translates to: GVLVAATAVASL*TVAFAVAMPKP Trigger: AGGTTTAGGCATCGCAACCGCAAAGGCTACCGTTCACAACGAGGCCACAGCCGTGGCCGCAACCAGAACTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000226218.9 |
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| CDS TCA 72 bp | TGCCTGCTCAGTCTCCCACCACCCCCTGAGTACCCTTaGAGAAGTAGACCCGCTCCCGGCCACTGTAGCTAT | + |
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Preference number: 6 (lower is better) Translates to: CLLSLPPPPEYP*RSRPAPGHCSY Trigger: ATAGCTACAGTGGCCGGGAGCGGGTCTACTTCTTCAAGGGTACTCAGGGGGTGGTGGGAGACTGAGCAGGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000539746.1 |
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| CDS CCA 72 bp | GTGGTGGGCATTAGGAGGGCTGGGCCAGGGCAAGACTaGAGATCCCAGAGGCTGTTGAAGTTAGGATCTCCC | + |
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Preference number: 6 (lower is better) Translates to: VVGIRRAGPGQD*RSQRLLKLGSP Trigger: GGGAGATCCTAACTTCAACAGCCTCTGGGATCTCCAGTCTTGCCCTGGCCCAGCCCTCCTAATGCCCACCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000539746.1 |
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| CDS CAA 72 bp | CAGTACTGCCCTCGGAAGGCAAAGAGGGAACCGTTCTaGAGGTCGGTGAAGGCGTCGAAGGGCTTCCCACTG | + |
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Preference number: 6 (lower is better) Translates to: QYCPRKAKREPF*RSVKASKGFPL Trigger: CAGTGGGAAGCCCTTCGACGCCTTCACCGACCTCAAGAACGGTTCCCTCTTTGCCTTCCGAGGGCAGTACTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000226218.9 |
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| CDS GCA 72 bp | CAGGGAGGGCCAAGGCTGCATCCACGTTGTCCGGGATaGCATCGAAGCCGTCAGAGATATTTCGGGGGTAAT | + |
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Preference number: 6 (lower is better) Translates to: QGGPRLHPRCPG*HRSRQRYFGGN Trigger: ATTACCCCCGAAATATCTCTGACGGCTTCGATGGCATCCCGGACAACGTGGATGCAGCCTTGGCCCTCCCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000226218.9 |
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| CDS CCA 72 bp | GCTCGAAGATGTCCTCCCAGCTGTCCCGCTGCATCATaGCAAAGTGTTCAAACACAGCCGACAGGGAGCTGC | + |
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Preference number: 6 (lower is better) Translates to: ARRCPPSCPAAS*QSVQTQPTGSC Trigger: GCAGCTCCCTGTCGGCTGTGTTTGAACACTTTGCCATGATGCAGCGGGACAGCTGGGAGGACATCTTCGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000226218.9 ENST00000539746.1 |
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| CDS CCA 72 bp | CATCATAGTTGTTGGCTCCCAAGTTGCTCTCCTCACTaGAGAACAAGGACAGCCACGTGGCGCGGGATGGCC | + |
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Preference number: 6 (lower is better) Translates to: HHSCWLPSCSPH*RTRTATWRGMA Trigger: GGCCATCCCGCGCCACGTGGCTGTCCTTGTTCTCCAGTGAGGAGAGCAACTTGGGAGCCAACAACTATGATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000226218.9 |
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| CDS CAA 72 bp | GAGCAGAGCTCGTCACACTGGCACTTCTTGTCCACGTaGAAGCCCTCAGTGCAGCGGCCCTTGCATGACTCT | + |
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Preference number: 6 (lower is better) Translates to: EQSSSHWHFLST*KPSVQRPLHDS Trigger: AGAGTCATGCAAGGGCCGCTGCACTGAGGGCTTCAACGTGGACAAGAAGTGCCAGTGTGACGAGCTCTGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000226218.9 ENST00000542029.1 |
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| CDS TCA 72 bp | AGCAGAGCTCGTCACACTGGCACTTCTTGTCCACGTTaGAGCCCTCAGTGCAGCGGCCCTTGCATGACTCTT | + |
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Preference number: 6 (lower is better) Translates to: SRARHTGTSCPR*SPQCSGPCMTL Trigger: AAGAGTCATGCAAGGGCCGCTGCACTGAGGGCTTCAACGTGGACAAGAAGTGCCAGTGTGACGAGCTCTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000226218.9 ENST00000542029.1 |
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| CDS GCA 72 bp | GACATCTCGGATGAGCTTGGGGTACCCAGGCCTCACTaGCTTTTCGTCCAGTTCATAGCAGTACTGCCCTCG | + |
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Preference number: 6 (lower is better) Translates to: DISDELGVPRPH*LFVQFIAVLPS Trigger: CGAGGGCAGTACTGCTATGAACTGGACGAAAAGGCAGTGAGGCCTGGGTACCCCAAGCTCATCCGAGATGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000226218.9 |
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| CDS GCA 72 bp | AAGAGAAGCTCGAAGATGTCCTCCCAGCTGTCCCGCTaGATCATGGCAAAGTGTTCAAACACAGCCGACAGG | + |
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Preference number: 6 (lower is better) Translates to: KRSSKMSSQLSR*IMAKCSNTADR Trigger: CCTGTCGGCTGTGTTTGAACACTTTGCCATGATGCAGCGGGACAGCTGGGAGGACATCTTCGAGCTTCTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000226218.9 ENST00000539746.1 |
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| CDS TCA 72 bp | GAGGGTCCACAGTGTCCACTCGCCGTGTGCGAAGATTaGCTCGGTAGTACTTGTCTCCAGAGAAGAAGAAGA | + |
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Preference number: 6 (lower is better) Translates to: EGPQCPLAVCED*LGSTCLQRRRR Trigger: TCTTCTTCTTCTCTGGAGACAAGTACTACCGAGTCAATCTTCGCACACGGCGAGTGGACACTGTGGACCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000226218.9 |
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| CDS CCA 72 bp | AGTACTTGTCTCCAGAGAAGAAGAAGACACTCTGGATaGGTTCACAGGTGGCAGGCACAAGCCAGTCCATCC | + |
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Preference number: 6 (lower is better) Translates to: STCLQRRRRHSG*VHRWQAQASPS Trigger: GGATGGACTGGCTTGTGCCTGCCACCTGTGAACCCATCCAGAGTGTCTTCTTCTTCTCTGGAGACAAGTACT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000226218.9 |
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| CDS CCA 72 bp | GCACAAGCCAGTCCATCCTGTAGTCATCATAGTTGTTaGCTCCCAAGTTGCTCTCCTCACTGGAGAACAAGG | + |
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Preference number: 6 (lower is better) Translates to: AQASPSCSHHSC*LPSCSPHWRTR Trigger: CCTTGTTCTCCAGTGAGGAGAGCAACTTGGGAGCCAACAACTATGATGACTACAGGATGGACTGGCTTGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000226218.9 |
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| CDS CCA 72 bp | CAGAGAAGAAGAAGACACTCTGGATGGGTTCACAGGTaGCAGGCACAAGCCAGTCCATCCTGTAGTCATCAT | + |
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Preference number: 6 (lower is better) Translates to: QRRRRHSGWVHR*QAQASPSCSHH Trigger: ATGATGACTACAGGATGGACTGGCTTGTGCCTGCCACCTGTGAACCCATCCAGAGTGTCTTCTTCTTCTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000226218.9 |
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