Pregenerated sensors for VSTM2B-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000264515Ensembl transcript IDs: ENST00000577849.1, ENST00000582581.5, ENST00000660387.1, ENST00000664318.1
Found 89 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GCGTGTGCGCTCTCCGCGCCGCAGGCACCTGCTCGCTGGGCGCTGTaGGCTCACTTCTCCCTCGCGCACTGCAGACTCCCGGCGCTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: ACALSAPQAPARWAL*AHFSLAHCRLPALP Trigger: CGGCAGCGCCGGGAGTCTGCAGTGCGCGAGGGAGAAGTGAGCGCACAGCGCCCAGCGAGCAGGTGCCTGCGGCGCGGAGAGCGCACACGC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000577849.1 ENST00000582581.5 |
||
| CDS GCA 90 bp | GCACCTGCTCGCTGGGCGCTGTGCGCTCACTTCTCCCTCGCGCACTaGAGACTCCCGGCGCTGCCGCCGCCACCCAGCGTAGTCTCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: APARWALCAHFSLAH*RLPALPPPPSVVSG Trigger: GCCGGAGACTACGCTGGGTGGCGGCGGCAGCGCCGGGAGTCTGCAGTGCGCGAGGGAGAAGTGAGCGCACAGCGCCCAGCGAGCAGGTGC 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000577849.1 ENST00000582581.5 |
||
| CDS GCA 90 bp | CGCTGCGGGCTGGCTAGCGTGTGCGCTCTCCGCGCCGCAGGCACCTaGTCGCTGGGCGCTGTGCGCTCACTTCTCCCTCGCGCACTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: RCGLASVCALRAAGT*SLGAVRSLLPRALQ Trigger: CTGCAGTGCGCGAGGGAGAAGTGAGCGCACAGCGCCCAGCGAGCAGGTGCCTGCGGCGCGGAGAGCGCACACGCTAGCCAGCCCGCAGCG 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000577849.1 ENST00000582581.5 |
||
| CDS GCA 90 bp | CCAGGAACAGTGGTCACTTTCGGCCGCTGCGGGCTGGCTAGCGTGTaGGCTCTCCGCGCCGCAGGCACCTGCTCGCTGGGCGCTGTGCGC | + |
|
Preference number: 5 (lower is better) Translates to: PGTVVTFGRCGLASV*ALRAAGTCSLGAVR Trigger: GCGCACAGCGCCCAGCGAGCAGGTGCCTGCGGCGCGGAGAGCGCACACGCTAGCCAGCCCGCAGCGGCCGAAAGTGACCACTGTTCCTGG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000577849.1 ENST00000582581.5 |
||
| CDS CCA 90 bp | AGCGTTCCGCCCTTCTCGCGGCCCCGGGCGCCCACCCATCCGTCATaGCCCAGGCCTGGGCCAAACAGCGGGGCAGCTGGTTGCCCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: SVPPFSRPRAPTHPS*PRPGPNSGAAGCPN Trigger: GTTTGGGCAACCAGCTGCCCCGCTGTTTGGCCCAGGCCTGGGCCATGACGGATGGGTGGGCGCCCGGGGCCGCGAGAAGGGCGGAACGCT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000577849.1 ENST00000582581.5 |
||
| CDS CCA 90 bp | GGCTGGCTAGCGTGTGCGCTCTCCGCGCCGCAGGCACCTGCTCGCTaGGCGCTGTGCGCTCACTTCTCCCTCGCGCACTGCAGACTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: GWLACALSAPQAPAR*ALCAHFSLAHCRLP Trigger: CGGGAGTCTGCAGTGCGCGAGGGAGAAGTGAGCGCACAGCGCCCAGCGAGCAGGTGCCTGCGGCGCGGAGAGCGCACACGCTAGCCAGCC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000577849.1 ENST00000582581.5 |
||
| CDS TCA 90 bp | CTGCCACACTCTGGGACCCCGCTGGGTGACTGTGGCCTGGCATGGTaGGCTGGGGGCCAGCCACTGCCCTCAGGACAGCAGGGTCCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: LPHSGTPLGDCGLAW*AGGQPLPSGQQGPL Trigger: CAGAGGACCCTGCTGTCCTGAGGGCAGTGGCTGGCCCCCAGCTCACCATGCCAGGCCACAGTCACCCAGCGGGGTCCCAGAGTGTGGCAG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000664318.1 |
||
| CDS GCA 90 bp | GGTGAGCTGGGGGCCAGCCACTGCCCTCAGGACAGCAGGGTCCTCTaGCTTTCCCCCGCAGAGTGGCCTGGCCTGCCTCATGCTTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: GELGASHCPQDSRVL*LSPAEWPGLPHASC Trigger: GCAGGAAGCATGAGGCAGGCCAGGCCACTCTGCGGGGGAAAGGCAGAGGACCCTGCTGTCCTGAGGGCAGTGGCTGGCCCCCAGCTCACC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000664318.1 |
||
| CDS CCA 90 bp | GGTGGTTCCTGCCACACTCTGGGACCCCGCTGGGTGACTGTGGCCTaGCATGGTGAGCTGGGGGCCAGCCACTGCCCTCAGGACAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GGSCHTLGPRWVTVA*HGELGASHCPQDSR Trigger: CCTGCTGTCCTGAGGGCAGTGGCTGGCCCCCAGCTCACCATGCCAGGCCACAGTCACCCAGCGGGGTCCCAGAGTGTGGCAGGAACCACC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000664318.1 |
||
| CDS CCA 90 bp | TTCCCCCGCAGAGTGGCCTGGCCTGCCTCATGCTTCCTGCAGAGCTaGAGGCTGATGGACTCCAGACCCAGCACTTCTGCTGCGGCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: FPRRVAWPASCFLQS*RLMDSRPSTSAAAS Trigger: TGAGGCCGCAGCAGAAGTGCTGGGTCTGGAGTCCATCAGCCTCCAGCTCTGCAGGAAGCATGAGGCAGGCCAGGCCACTCTGCGGGGGAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000664318.1 |
||
| CDS TCA 90 bp | GCAGAGTGGCCTGGCCTGCCTCATGCTTCCTGCAGAGCTGGAGGCTaGTGGACTCCAGACCCAGCACTTCTGCTGCGGCCTCAGCCATTC | + |
|
Preference number: 5 (lower is better) Translates to: AEWPGLPHASCRAGG*WTPDPALLLRPQPF Trigger: GAATGGCTGAGGCCGCAGCAGAAGTGCTGGGTCTGGAGTCCATCAGCCTCCAGCTCTGCAGGAAGCATGAGGCAGGCCAGGCCACTCTGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664318.1 |
||
| CDS TCA 90 bp | TTTCTGCTCCATGCCCGCCTGTCTGCACAGGGGAGTGCCCTGCCCTaGGGGAAACCAGGCATTCTTCTGGGCCAGACAGTCTCCTGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: FLLHARLSAQGSALP*GKPGILLGQTVSCP Trigger: TGGGCAGGAGACTGTCTGGCCCAGAAGAATGCCTGGTTTCCCTCAGGGCAGGGCACTCCCCTGTGCAGACAGGCGGGCATGGAGCAGAAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000582581.5 ENST00000660387.1 ENST00000664318.1 |
||
| CDS GCA 90 bp | GGCTGTTTCTGCTCCATGCCCGCCTGTCTGCACAGGGGAGTGCCCTaGCCTGAGGGAAACCAGGCATTCTTCTGGGCCAGACAGTCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: GCFCSMPACLHRGVP*PEGNQAFFWARQSP Trigger: AGGAGACTGTCTGGCCCAGAAGAATGCCTGGTTTCCCTCAGGGCAGGGCACTCCCCTGTGCAGACAGGCGGGCATGGAGCAGAAACAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000582581.5 ENST00000660387.1 ENST00000664318.1 |
||
| CDS GCA 90 bp | ACCCTGGCTGTTTCTGCTCCATGCCCGCCTGTCTGCACAGGGGAGTaGCCTGCCCTGAGGGAAACCAGGCATTCTTCTGGGCCAGACAGT | + |
|
Preference number: 5 (lower is better) Translates to: TLAVSAPCPPVCTGE*PALRETRHSSGPDS Trigger: ACTGTCTGGCCCAGAAGAATGCCTGGTTTCCCTCAGGGCAGGGCACTCCCCTGTGCAGACAGGCGGGCATGGAGCAGAAACAGCCAGGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000582581.5 ENST00000660387.1 ENST00000664318.1 |
||
| CDS GCA 90 bp | TTCATGCTGCTGAAAAGCTCGTCCACCCTGGCTGTTTCTGCTCCATaGCCGCCTGTCTGCACAGGGGAGTGCCCTGCCCTGAGGGAAACC | + |
|
Preference number: 5 (lower is better) Translates to: FMLLKSSSTLAVSAP*PPVCTGECPALRET Trigger: GGTTTCCCTCAGGGCAGGGCACTCCCCTGTGCAGACAGGCGGGCATGGAGCAGAAACAGCCAGGGTGGACGAGCTTTTCAGCAGCATGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000582581.5 ENST00000660387.1 ENST00000664318.1 |
||
| CDS GCA 90 bp | TGTTGCCTTCATGCTGCTGAAAAGCTCGTCCACCCTGGCTGTTTCTaGTCCATGCCCGCCTGTCTGCACAGGGGAGTGCCCTGCCCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: CCLHAAEKLVHPGCF*SMPACLHRGVPCPE Trigger: CTCAGGGCAGGGCACTCCCCTGTGCAGACAGGCGGGCATGGAGCAGAAACAGCCAGGGTGGACGAGCTTTTCAGCAGCATGAAGGCAACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000582581.5 ENST00000660387.1 ENST00000664318.1 |
||
| CDS CCA 90 bp | GCATCATACAGCCTGCTTTCTAAGCGCAAGGCCAAGGGGAAGAGGTaGTTCCTGCCACACTCTGGGACCCCGCTGGGTGACTGTGGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: ASYSLLSKRKAKGKR*FLPHSGTPLGDCGL Trigger: CAGGCCACAGTCACCCAGCGGGGTCCCAGAGTGTGGCAGGAACCACCTCTTCCCCTTGGCCTTGCGCTTAGAAAGCAGGCTGTATGATGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000664318.1 |
||
| CDS GCA 90 bp | AAAAGCTCGTCCACCCTGGCTGTTTCTGCTCCATGCCCGCCTGTCTaGACAGGGGAGTGCCCTGCCCTGAGGGAAACCAGGCATTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: KSSSTLAVSAPCPPV*TGECPALRETRHSS Trigger: AGAAGAATGCCTGGTTTCCCTCAGGGCAGGGCACTCCCCTGTGCAGACAGGCGGGCATGGAGCAGAAACAGCCAGGGTGGACGAGCTTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000582581.5 ENST00000660387.1 ENST00000664318.1 |
||
| CDS GCA 90 bp | GGGCAGGCCCATTGGTTGGAGGACGGGGAAATGAGCTGTAGATGGTaGCCCTTTGACCCTCTGATCCATCTTCCTGTGCCTCACAGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: GQAHWLEDGEMSCRW*PFDPLIHLPVPHSL Trigger: CAGACTGTGAGGCACAGGAAGATGGATCAGAGGGTCAAAGGGGCACCATCTACAGCTCATTTCCCCGTCCTCCAACCAATGGGCCTGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000582581.5 ENST00000660387.1 ENST00000664318.1 |
||
| CDS CCA 90 bp | GAAGGCTGGTGCTTCACACTTCACTCCCATGTCTGGCCTTCCATGTaGCCCCTCCCACAACTCACAAGATGCTTCTGCAGGCAACACCAG | + |
|
Preference number: 5 (lower is better) Translates to: EGWCFTLHSHVWPSM*PLPQLTRCFCRQHQ Trigger: CTGGTGTTGCCTGCAGAAGCATCTTGTGAGTTGTGGGAGGGGCCACATGGAAGGCCAGACATGGGAGTGAAGTGTGAAGCACCAGCCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000582581.5 ENST00000660387.1 |
||
| CDS TCA 90 bp | ACAGATCTGGGCACACTCAGCCAAGCTGTTGGTGAGATAAGGCGCTaGAGACCCCACAGTACCCTTCAGGAGGAAGACCCCAATCCCACT | + |
|
Preference number: 5 (lower is better) Translates to: TDLGTLSQAVGEIRR*RPHSTLQEEDPNPT Trigger: AGTGGGATTGGGGTCTTCCTCCTGAAGGGTACTGTGGGGTCTTCAGCGCCTTATCTCACCAACAGCTTGGCTGAGTGTGCCCAGATCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000660387.1 |
||
| CDS TCA 90 bp | CTTACCACAGTGCACAGATCTGGGCACACTCAGCCAAGCTGTTGGTaGGATAAGGCGCTGAAGACCCCACAGTACCCTTCAGGAGGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: LTTVHRSGHTQPSCW*DKALKTPQYPSGGR Trigger: TCTTCCTCCTGAAGGGTACTGTGGGGTCTTCAGCGCCTTATCTCACCAACAGCTTGGCTGAGTGTGCCCAGATCTGTGCACTGTGGTAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660387.1 |
||
| CDS GCA 90 bp | AAATGGGAGGCCCAAGGCATCTCTGCAGGACAGAGACTGGACATATaGCCAGAGAGGTTCAGGTCCGTGAGTCTGGAATATCCTCCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: KWEAQGISAGQRLDI*PERFRSVSLEYPPP Trigger: AGGAGGAGGATATTCCAGACTCACGGACCTGAACCTCTCTGGGCATATGTCCAGTCTCTGTCCTGCAGAGATGCCTTGGGCCTCCCATTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000582581.5 ENST00000660387.1 ENST00000664318.1 |
||
| CDS GCA 90 bp | GTGCTCAGGAGCCTGAACACAGGAGGCCCGAAACAGGGCTTGTGTTaGATGGACCTGAAGCCAGAGGTGAGGGCGATTAGGAAATTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: VLRSLNTGGPKQGLC*MDLKPEVRAIRKFF Trigger: AAAGAATTTCCTAATCGCCCTCACCTCTGGCTTCAGGTCCATGCAACACAAGCCCTGTTTCGGGCCTCCTGTGTTCAGGCTCCTGAGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000582581.5 ENST00000660387.1 |
||
| CDS TCA 90 bp | AGGGCGATTAGGAAATTCTTTCCCACATCAGGGGAAGGATGCTGTTaGAATGGGAGGCCCAAGGCATCTCTGCAGGACAGAGACTGGACA | + |
|
Preference number: 5 (lower is better) Translates to: RAIRKFFPTSGEGCC*NGRPKASLQDRDWT Trigger: TGTCCAGTCTCTGTCCTGCAGAGATGCCTTGGGCCTCCCATTTCAACAGCATCCTTCCCCTGATGTGGGAAAGAATTTCCTAATCGCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000582581.5 ENST00000660387.1 ENST00000664318.1 |
||
| CDS GCA 90 bp | TGTGAGCCACCATGCTCAGAGCCAAAGGGAAGGTTCTATCCAGGGTaGCCAGAGATTCTTAGCAAGTCAGTCCTCAGATTCTGCTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: CEPPCSEPKGRFYPG*PEILSKSVLRFCST Trigger: TGTGGAGCAGAATCTGAGGACTGACTTGCTAAGAATCTCTGGGCACCCTGGATAGAACCTTCCCTTTGGCTCTGAGCATGGTGGCTCACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000577849.1 ENST00000582581.5 |
||
| CDS GCA 90 bp | CTTGTGGTGCTGAGCGAAAGGTCCACACACCTCTCGGTTAATACCTaGCCAGGCTTAATACCTAATCACCATCCTCGGATTGCCTCTCAA | + |
|
Preference number: 5 (lower is better) Translates to: LVVLSERSTHLSVNT*PGLIPNHHPRIASQ Trigger: TTGAGAGGCAATCCGAGGATGGTGATTAGGTATTAAGCCTGGGCAGGTATTAACCGAGAGGTGTGTGGACCTTTCGCTCAGCACCACAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000582581.5 ENST00000660387.1 |
||
| CDS TCA 90 bp | CATCATCGTTCAGCAAATTCGGGAGACAGCATTTCCACTTTCTACTaGAGCATCCTGGAGCACATTCTTCTCCAAGTGCAAGGCAAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: HHRSANSGDSISTFY*SILEHILLQVQGKR Trigger: CCTCTTGCCTTGCACTTGGAGAAGAATGTGCTCCAGGATGCTTCAGTAGAAAGTGGAAATGCTGTCTCCCGAATTTGCTGAACGATGATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000582581.5 ENST00000660387.1 |
||
| CDS TCA 90 bp | GGCAAGAGTCCAGGTTCAATCATATTGAAAGCCTCTGGCTGGATGTaGCATACATATCTGCACACATTCCATTCGTTGGAGCAAGTCACG | + |
|
Preference number: 5 (lower is better) Translates to: GKSPGSIILKASGWM*HTYLHTFHSLEQVT Trigger: CGTGACTTGCTCCAACGAATGGAATGTGTGCAGATATGTATGTCACATCCAGCCAGAGGCTTTCAATATGATTGAACCTGGACTCTTGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000582581.5 ENST00000660387.1 |
||
| CDS TCA 90 bp | TTAACCCCAAGGGTTGAATTTCAAACACGGAATTGGAGGCATTGGTaGGCAAGATATGCACACACACGGCATCATACAGCCTGCTTTCTA | + |
|
Preference number: 5 (lower is better) Translates to: LTPRVEFQTRNWRHW*ARYAHTRHHTACFL Trigger: TAGAAAGCAGGCTGTATGATGCCGTGTGTGTGCATATCTTGCTCACCAATGCCTCCAATTCCGTGTTTGAAATTCAACCCTTGGGGTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664318.1 |
||
| CDS GCA 90 bp | TTTCCACTTTCTACTGAAGCATCCTGGAGCACATTCTTCTCCAAGTaGAAGGCAAGAGGGCAAGAGTCCAGGTTCAATCATATTGAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: FPLSTEASWSTFFSK*KARGQESRFNHIES Trigger: GCTTTCAATATGATTGAACCTGGACTCTTGCCCTCTTGCCTTGCACTTGGAGAAGAATGTGCTCCAGGATGCTTCAGTAGAAAGTGGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000582581.5 ENST00000660387.1 |
||
| CDS CCA 90 bp | CACACTCTGGAGAGAGAGATAAGACTCCACCAGCGACTCCACATATaGCTGGAAGATCTGTATTTTAAGAGAAACGTGAACCAGAACTTG | + |
|
Preference number: 5 (lower is better) Translates to: HTLEREIRLHQRLHI*LEDLYFKRNVNQNL Trigger: CAAGTTCTGGTTCACGTTTCTCTTAAAATACAGATCTTCCAGCCATATGTGGAGTCGCTGGTGGAGTCTTATCTCTCTCTCCAGAGTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664318.1 |
||
| CDS TCA 90 bp | AGCGACTCCACATATGGCTGGAAGATCTGTATTTTAAGAGAAACGTaGACCAGAACTTGCTTAACCCCAAGGGTTGAATTTCAAACACGG | + |
|
Preference number: 5 (lower is better) Translates to: SDSTYGWKICILRET*TRTCLTPRVEFQTR Trigger: CCGTGTTTGAAATTCAACCCTTGGGGTTAAGCAAGTTCTGGTTCACGTTTCTCTTAAAATACAGATCTTCCAGCCATATGTGGAGTCGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000664318.1 |
||
| CDS GCA 90 bp | AAAATGCCAGTCTACAAATCTAGCATGCTGGAGGCAGAAACCATGTaGTCAGAATCATTAAAATCACATTTCACTTTGCCACAGTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: KMPVYKSSMLEAETM*SESLKSHFTLPQCS Trigger: GCTGCACTGTGGCAAAGTGAAATGTGATTTTAATGATTCTGAGCACATGGTTTCTGCCTCCAGCATGCTAGATTTGTAGACTGGCATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000582581.5 ENST00000660387.1 |
||
| CDS TCA 90 bp | TATTTTAAGAGAAACGTGAACCAGAACTTGCTTAACCCCAAGGGTTaGATTTCAAACACGGAATTGGAGGCATTGGTGAGCAAGATATGC | + |
|
Preference number: 5 (lower is better) Translates to: YFKRNVNQNLLNPKG*ISNTELEALVSKIC Trigger: GCATATCTTGCTCACCAATGCCTCCAATTCCGTGTTTGAAATTCAACCCTTGGGGTTAAGCAAGTTCTGGTTCACGTTTCTCTTAAAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000664318.1 |
||
| CDS GCA 90 bp | CCCACATTGTACATGCTCATAACAAAGACAAGTCCCCATCTACCATaGTGTAACTTAGAAAGGCACAAGTTATACAACATCTGGAATCTA | + |
|
Preference number: 5 (lower is better) Translates to: PTLYMLITKTSPHLP*CNLERHKLYNIWNL Trigger: TAGATTCCAGATGTTGTATAACTTGTGCCTTTCTAAGTTACAGCATGGTAGATGGGGACTTGTCTTTGTTATGAGCATGTACAATGTGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000582581.5 ENST00000660387.1 |
||
| CDS CCA 72 bp | CCGGCGCTGCCGCCGCCACCCAGCGTAGTCTCCGGCTaGGCACAGCGTTCCGCCCTTCTCGCGGCCCCGGGC | + |
|
Preference number: 6 (lower is better) Translates to: PALPPPPSVVSG*AQRSALLAAPG Trigger: GCCCGGGGCCGCGAGAAGGGCGGAACGCTGTGCCCAGCCGGAGACTACGCTGGGTGGCGGCGGCAGCGCCGG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000577849.1 ENST00000582581.5 |
||
| CDS CCA 72 bp | CCCTTCTCGCGGCCCCGGGCGCCCACCCATCCGTCATaGCCCAGGCCTGGGCCAAACAGCGGGGCAGCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: PFSRPRAPTHPS*PRPGPNSGAAG Trigger: ACCAGCTGCCCCGCTGTTTGGCCCAGGCCTGGGCCATGACGGATGGGTGGGCGCCCGGGGCCGCGAGAAGGG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000577849.1 ENST00000582581.5 |
||
| CDS GCA 72 bp | CGCTGGGCGCTGTGCGCTCACTTCTCCCTCGCGCACTaGAGACTCCCGGCGCTGCCGCCGCCACCCAGCGTA | + |
|
Preference number: 6 (lower is better) Translates to: RWALCAHFSLAH*RLPALPPPPSV Trigger: TACGCTGGGTGGCGGCGGCAGCGCCGGGAGTCTGCAGTGCGCGAGGGAGAAGTGAGCGCACAGCGCCCAGCG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000577849.1 ENST00000582581.5 |
||
| CDS GCA 72 bp | GTGGTCACTTTCGGCCGCTGCGGGCTGGCTAGCGTGTaGGCTCTCCGCGCCGCAGGCACCTGCTCGCTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: VVTFGRCGLASV*ALRAAGTCSLG Trigger: GCCCAGCGAGCAGGTGCCTGCGGCGCGGAGAGCGCACACGCTAGCCAGCCCGCAGCGGCCGAAAGTGACCAC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000577849.1 ENST00000582581.5 |
||
| CDS CCA 72 bp | GCGTGTGCGCTCTCCGCGCCGCAGGCACCTGCTCGCTaGGCGCTGTGCGCTCACTTCTCCCTCGCGCACTGC | + |
|
Preference number: 6 (lower is better) Translates to: ACALSAPQAPAR*ALCAHFSLAHC Trigger: GCAGTGCGCGAGGGAGAAGTGAGCGCACAGCGCCCAGCGAGCAGGTGCCTGCGGCGCGGAGAGCGCACACGC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000577849.1 ENST00000582581.5 |
||
| CDS GCA 72 bp | CTCTCCGCGCCGCAGGCACCTGCTCGCTGGGCGCTGTaGGCTCACTTCTCCCTCGCGCACTGCAGACTCCCG | + |
|
Preference number: 6 (lower is better) Translates to: LSAPQAPARWAL*AHFSLAHCRLP Trigger: CGGGAGTCTGCAGTGCGCGAGGGAGAAGTGAGCGCACAGCGCCCAGCGAGCAGGTGCCTGCGGCGCGGAGAG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000577849.1 ENST00000582581.5 |
||
| CDS GCA 72 bp | CTGGCTAGCGTGTGCGCTCTCCGCGCCGCAGGCACCTaGTCGCTGGGCGCTGTGCGCTCACTTCTCCCTCGC | + |
|
Preference number: 6 (lower is better) Translates to: LASVCALRAAGT*SLGAVRSLLPR Trigger: GCGAGGGAGAAGTGAGCGCACAGCGCCCAGCGAGCAGGTGCCTGCGGCGCGGAGAGCGCACACGCTAGCCAG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000577849.1 ENST00000582581.5 |
||
| CDS CCA 72 bp | GCCCCGGGCGCCCACCCATCCGTCATGGCCCAGGCCTaGGCCAAACAGCGGGGCAGCTGGTTGCCCAAACTG | + |
|
Preference number: 6 (lower is better) Translates to: APGAHPSVMAQA*AKQRGSWLPKL Trigger: CAGTTTGGGCAACCAGCTGCCCCGCTGTTTGGCCCAGGCCTGGGCCATGACGGATGGGTGGGCGCCCGGGGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000577849.1 ENST00000582581.5 |
||
| CDS GCA 72 bp | GGGGCCAGCCACTGCCCTCAGGACAGCAGGGTCCTCTaGCTTTCCCCCGCAGAGTGGCCTGGCCTGCCTCAT | + |
|
Preference number: 6 (lower is better) Translates to: GASHCPQDSRVL*LSPAEWPGLPH Trigger: ATGAGGCAGGCCAGGCCACTCTGCGGGGGAAAGGCAGAGGACCCTGCTGTCCTGAGGGCAGTGGCTGGCCCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000664318.1 |
||
| CDS CCA 72 bp | CTCCAGGAACAGTGGTCACTTTCGGCCGCTGCGGGCTaGCTAGCGTGTGCGCTCTCCGCGCCGCAGGCACCT | + |
|
Preference number: 6 (lower is better) Translates to: LQEQWSLSAAAG*LACALSAPQAP Trigger: AGGTGCCTGCGGCGCGGAGAGCGCACACGCTAGCCAGCCCGCAGCGGCCGAAAGTGACCACTGTTCCTGGAG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000577849.1 ENST00000582581.5 |
||
| CDS TCA 72 bp | CATGCCCGCCTGTCTGCACAGGGGAGTGCCCTGCCCTaGGGGAAACCAGGCATTCTTCTGGGCCAGACAGTC | + |
|
Preference number: 6 (lower is better) Translates to: HARLSAQGSALP*GKPGILLGQTV Trigger: GACTGTCTGGCCCAGAAGAATGCCTGGTTTCCCTCAGGGCAGGGCACTCCCCTGTGCAGACAGGCGGGCATG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000582581.5 ENST00000660387.1 ENST00000664318.1 |
||
| CDS GCA 72 bp | TGCTCCATGCCCGCCTGTCTGCACAGGGGAGTGCCCTaGCCTGAGGGAAACCAGGCATTCTTCTGGGCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: CSMPACLHRGVP*PEGNQAFFWAR Trigger: TCTGGCCCAGAAGAATGCCTGGTTTCCCTCAGGGCAGGGCACTCCCCTGTGCAGACAGGCGGGCATGGAGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000582581.5 ENST00000660387.1 ENST00000664318.1 |
||
| CDS GCA 72 bp | CTGAAAAGCTCGTCCACCCTGGCTGTTTCTGCTCCATaGCCGCCTGTCTGCACAGGGGAGTGCCCTGCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: LKSSSTLAVSAP*PPVCTGECPAL Trigger: CAGGGCAGGGCACTCCCCTGTGCAGACAGGCGGGCATGGAGCAGAAACAGCCAGGGTGGACGAGCTTTTCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000582581.5 ENST00000660387.1 ENST00000664318.1 |
||
| CDS TCA 72 bp | TGGATCAACTGGGCCCTGGGCACCCTGGTGCTGAGATaGAAGGCCAGCCTCCACTGCAGGGACACACTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: WINWALGTLVLR*KASLHCRDTLW Trigger: CCAGAGTGTGTCCCTGCAGTGGAGGCTGGCCTTTCATCTCAGCACCAGGGTGCCCAGGGCCCAGTTGATCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000582581.5 ENST00000660387.1 ENST00000664318.1 |
||
| CDS GCA 72 bp | GTTTCTGCTCCATGCCCGCCTGTCTGCACAGGGGAGTaGCCTGCCCTGAGGGAAACCAGGCATTCTTCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: VSAPCPPVCTGE*PALRETRHSSG Trigger: CCCAGAAGAATGCCTGGTTTCCCTCAGGGCAGGGCACTCCCCTGTGCAGACAGGCGGGCATGGAGCAGAAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000582581.5 ENST00000660387.1 ENST00000664318.1 |
||
| CDS CCA 72 bp | AGAGTGGCCTGGCCTGCCTCATGCTTCCTGCAGAGCTaGAGGCTGATGGACTCCAGACCCAGCACTTCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: RVAWPASCFLQS*RLMDSRPSTSA Trigger: AGCAGAAGTGCTGGGTCTGGAGTCCATCAGCCTCCAGCTCTGCAGGAAGCATGAGGCAGGCCAGGCCACTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664318.1 |
||
| CDS TCA 72 bp | GGCACACTCAGCCAAGCTGTTGGTGAGATAAGGCGCTaGAGACCCCACAGTACCCTTCAGGAGGAAGACCCC | + |
|
Preference number: 6 (lower is better) Translates to: GTLSQAVGEIRR*RPHSTLQEEDP Trigger: GGGGTCTTCCTCCTGAAGGGTACTGTGGGGTCTTCAGCGCCTTATCTCACCAACAGCTTGGCTGAGTGTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660387.1 |
||
| CDS GCA 72 bp | AGCCTGAACACAGGAGGCCCGAAACAGGGCTTGTGTTaGATGGACCTGAAGCCAGAGGTGAGGGCGATTAGG | + |
|
Preference number: 6 (lower is better) Translates to: SLNTGGPKQGLC*MDLKPEVRAIR Trigger: CCTAATCGCCCTCACCTCTGGCTTCAGGTCCATGCAACACAAGCCCTGTTTCGGGCCTCCTGTGTTCAGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000582581.5 ENST00000660387.1 |
||
| CDS CAA 90 bp | CTTTGCCACAGTGCAGCTCTGTCCCTGGCTGATGGCCAGATAAGCTaGCTGGCAGAGATCTGCTCTTGTGGTGCTGAGCGAAAGGTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: LCHSAALSLADGQIS*LAEICSCGAERKVH Trigger: GTGGACCTTTCGCTCAGCACCACAAGAGCAGATCTCTGCCAGCAAGCTTATCTGGCCATCAGCCAGGGACAGAGCTGCACTGTGGCAAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000582581.5 ENST00000660387.1 |
||
| CDS TCA 72 bp | TGGCTGGAAGATCTGGGTGCCACCTGTCCCAGCACCTaGGCTCTGGACAACGGAAACTTAGCTCGTTCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: WLEDLGATCPST*ALDNGNLARSP Trigger: TGGAGAACGAGCTAAGTTTCCGTTGTCCAGAGCTCAGGTGCTGGGACAGGTGGCACCCAGATCTTCCAGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000582581.5 ENST00000660387.1 |
||
| CDS TCA 72 bp | AGAGACTGGACATATGCCCAGAGAGGTTCAGGTCCGTaGGTCTGGAATATCCTCCTCCTCCCCAGGGACAGG | + |
|
Preference number: 6 (lower is better) Translates to: RDWTYAQRGSGP*VWNILLLPRDR Trigger: CCTGTCCCTGGGGAGGAGGAGGATATTCCAGACTCACGGACCTGAACCTCTCTGGGCATATGTCCAGTCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000582581.5 ENST00000660387.1 ENST00000664318.1 |
||
| CDS GCA 72 bp | TGGCCTTCCATGTGGCCCCTCCCACAACTCACAAGATaGTTCTGCAGGCAACACCAGCCTCCCTGGTTTCAA | + |
|
Preference number: 6 (lower is better) Translates to: WPSMWPLPQLTR*FCRQHQPPWFQ Trigger: TTGAAACCAGGGAGGCTGGTGTTGCCTGCAGAAGCATCTTGTGAGTTGTGGGAGGGGCCACATGGAAGGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000582581.5 ENST00000660387.1 |
||
| CDS CCA 72 bp | GAGAGAGAGATAAGACTCCACCAGCGACTCCACATATaGCTGGAAGATCTGGGTGCCACCTGTCCCAGCACC | + |
|
Preference number: 6 (lower is better) Translates to: EREIRLHQRLHI*LEDLGATCPST Trigger: GGTGCTGGGACAGGTGGCACCCAGATCTTCCAGCCATATGTGGAGTCGCTGGTGGAGTCTTATCTCTCTCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000582581.5 ENST00000660387.1 |
||
| CDS CAA 72 bp | AGTGCAGCTCTGTCCCTGGCTGATGGCCAGATAAGCTaGCTGGCAGAGATCTGCTCTTGTGGTGCTGAGCGA | + |
|
Preference number: 6 (lower is better) Translates to: SAALSLADGQIS*LAEICSCGAER Trigger: TCGCTCAGCACCACAAGAGCAGATCTCTGCCAGCAAGCTTATCTGGCCATCAGCCAGGGACAGAGCTGCACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000582581.5 ENST00000660387.1 |
||
| CDS CAA 72 bp | GCTTGGGAGCCAGCTGAGCTTGGGAGCCAACTAGGCTaGGATTCAAATCCTGCCTCGGTCCCTCTGTTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: AWEPAELGSQLG*DSNPASVPLFS Trigger: AGAGAACAGAGGGACCGAGGCAGGATTTGAATCCAAGCCTAGTTGGCTCCCAAGCTCAGCTGGCTCCCAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664318.1 |
||
| CDS CAA 90 bp | AGGGTGTGGGCTTGGGAGCCAGCTGAGCTTGGGAGCCAACTAGGCTaGGATTCAAATCCTGCCTCGGTCCCTCTGTTCTCTGAATGGAAA | + |
|
Preference number: 6 (lower is better) Translates to: RVWAWEPAELGSQLG*DSNPASVPLFSEWK Trigger: TTTCCATTCAGAGAACAGAGGGACCGAGGCAGGATTTGAATCCAAGCCTAGTTGGCTCCCAAGCTCAGCTGGCTCCCAAGCCCACACCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664318.1 |
||
| CDS TCA 72 bp | GTGCACAGATCTGGGCACACTCAGCCAAGCTGTTGGTaGGATAAGGCGCTGAAGACCCCACAGTACCCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: VHRSGHTQPSCW*DKALKTPQYPS Trigger: TGAAGGGTACTGTGGGGTCTTCAGCGCCTTATCTCACCAACAGCTTGGCTGAGTGTGCCCAGATCTGTGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660387.1 |
||
| CDS GCA 72 bp | TCCATGTGGCCCCTCCCACAACTCACAAGATGCTTCTaGAGGCAACACCAGCCTCCCTGGTTTCAAAAAGGG | + |
|
Preference number: 6 (lower is better) Translates to: SMWPLPQLTRCF*RQHQPPWFQKG Trigger: CCCTTTTTGAAACCAGGGAGGCTGGTGTTGCCTGCAGAAGCATCTTGTGAGTTGTGGGAGGGGCCACATGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000582581.5 ENST00000660387.1 |
||
| CDS GCA 72 bp | CTGGCTGATGGCCAGATAAGCTTGCTGGCAGAGATCTaGTCTTGTGGTGCTGAGCGAAAGGTCCACACACCT | + |
|
Preference number: 6 (lower is better) Translates to: LADGQISLLAEI*SCGAERKVHTP Trigger: AGGTGTGTGGACCTTTCGCTCAGCACCACAAGAGCAGATCTCTGCCAGCAAGCTTATCTGGCCATCAGCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000582581.5 ENST00000660387.1 |
||
| CDS CCA 72 bp | GTTGAGGGAAAGACCTGGTGGGACGTGTTTGGATCATaGGGGTGGTTCCCCCATGCTGTCCTCATGATAGAG | + |
|
Preference number: 6 (lower is better) Translates to: VEGKTWWDVFGS*GWFPHAVLMIE Trigger: CTCTATCATGAGGACAGCATGGGGGAACCACCCCCATGATCCAAACACGTCCCACCAGGTCTTTCCCTCAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000577849.1 |
||
| CDS CCA 72 bp | GCCCATTGGTTGGAGGACGGGGAAATGAGCTGTAGATaGTGCCCCTTTGACCCTCTGATCCATCTTCCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: AHWLEDGEMSCR*CPFDPLIHLPV Trigger: CACAGGAAGATGGATCAGAGGGTCAAAGGGGCACCATCTACAGCTCATTTCCCCGTCCTCCAACCAATGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000582581.5 ENST00000660387.1 ENST00000664318.1 |
||
| CDS GCA 72 bp | CATTGGTTGGAGGACGGGGAAATGAGCTGTAGATGGTaGCCCTTTGACCCTCTGATCCATCTTCCTGTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: HWLEDGEMSCRW*PFDPLIHLPVP Trigger: AGGCACAGGAAGATGGATCAGAGGGTCAAAGGGGCACCATCTACAGCTCATTTCCCCGTCCTCCAACCAATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000582581.5 ENST00000660387.1 ENST00000664318.1 |
||
| CDS GCA 72 bp | GCCCAAGGCATCTCTGCAGGACAGAGACTGGACATATaGCCAGAGAGGTTCAGGTCCGTGAGTCTGGAATAT | + |
|
Preference number: 6 (lower is better) Translates to: AQGISAGQRLDI*PERFRSVSLEY Trigger: ATATTCCAGACTCACGGACCTGAACCTCTCTGGGCATATGTCCAGTCTCTGTCCTGCAGAGATGCCTTGGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000582581.5 ENST00000660387.1 ENST00000664318.1 |
||
| CDS CCA 72 bp | GGAAAGACCTGGTGGGACGTGTTTGGATCATGGGGGTaGTTCCCCCATGCTGTCCTCATGATAGAGAGTGAT | + |
|
Preference number: 6 (lower is better) Translates to: GKTWWDVFGSWG*FPHAVLMIESD Trigger: ATCACTCTCTATCATGAGGACAGCATGGGGGAACCACCCCCATGATCCAAACACGTCCCACCAGGTCTTTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000577849.1 |
||
| CDS GCA 72 bp | CATTCCTTCACTCTCGACTGTGAACAAATCGGCTGTTaGCTTCATGCTGCTGAAAAGCTCGTCCACCCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: HSFTLDCEQIGC*LHAAEKLVHPG Trigger: GCCAGGGTGGACGAGCTTTTCAGCAGCATGAAGGCAACAGCCGATTTGTTCACAGTCGAGAGTGAAGGAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000582581.5 ENST00000660387.1 ENST00000664318.1 |
||
| CDS TCA 72 bp | AGGAAATTCTTTCCCACATCAGGGGAAGGATGCTGTTaGAATGGGAGGCCCAAGGCATCTCTGCAGGACAGA | + |
|
Preference number: 6 (lower is better) Translates to: RKFFPTSGEGCC*NGRPKASLQDR Trigger: TCTGTCCTGCAGAGATGCCTTGGGCCTCCCATTTCAACAGCATCCTTCCCCTGATGTGGGAAAGAATTTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000582581.5 ENST00000660387.1 ENST00000664318.1 |
||
| CDS TCA 72 bp | GATAAGCTTGCTGGCAGAGATCTGCTCTTGTGGTGCTaGGCGAAAGGTCCACACACCTCTCGGTTAATACCT | + |
|
Preference number: 6 (lower is better) Translates to: DKLAGRDLLLWC*AKGPHTSRLIP Trigger: AGGTATTAACCGAGAGGTGTGTGGACCTTTCGCTCAGCACCACAAGAGCAGATCTCTGCCAGCAAGCTTATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000582581.5 ENST00000660387.1 |
||
| CDS GCA 72 bp | CCATGCTCAGAGCCAAAGGGAAGGTTCTATCCAGGGTaGCCAGAGATTCTTAGCAAGTCAGTCCTCAGATTC | + |
|
Preference number: 6 (lower is better) Translates to: PCSEPKGRFYPG*PEILSKSVLRF Trigger: GAATCTGAGGACTGACTTGCTAAGAATCTCTGGGCACCCTGGATAGAACCTTCCCTTTGGCTCTGAGCATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000577849.1 ENST00000582581.5 |
||
| CDS CAA 90 bp | CAGCACCTGAGCTCTGGACAACGGAAACTTAGCTCGTTCTCCAAGTaGATTTCTCAAGGTTTGCATCCAGGAACTAGGCTGGTCTCGAAC | + |
|
Preference number: 6 (lower is better) Translates to: QHLSSGQRKLSSFSK*ISQGLHPGTRLVSN Trigger: GTTCGAGACCAGCCTAGTTCCTGGATGCAAACCTTGAGAAATCAACTTGGAGAACGAGCTAAGTTTCCGTTGTCCAGAGCTCAGGTGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000582581.5 |
||
| CDS GCA 72 bp | CTGAGCGAAAGGTCCACACACCTCTCGGTTAATACCTaGCCAGGCTTAATACCTAATCACCATCCTCGGATT | + |
|
Preference number: 6 (lower is better) Translates to: LSERSTHLSVNT*PGLIPNHHPRI Trigger: AATCCGAGGATGGTGATTAGGTATTAAGCCTGGGCAGGTATTAACCGAGAGGTGTGTGGACCTTTCGCTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000582581.5 ENST00000660387.1 |
||
| CDS GCA 72 bp | TCTACTGAAGCATCCTGGAGCACATTCTTCTCCAAGTaGAAGGCAAGAGGGCAAGAGTCCAGGTTCAATCAT | + |
|
Preference number: 6 (lower is better) Translates to: STEASWSTFFSK*KARGQESRFNH Trigger: ATGATTGAACCTGGACTCTTGCCCTCTTGCCTTGCACTTGGAGAAGAATGTGCTCCAGGATGCTTCAGTAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000582581.5 ENST00000660387.1 |
||
| CDS TCA 72 bp | CAAGGCAAGAGGGCAAGAGTCCAGGTTCAATCATATTaGAAGCCTCTGGCTGGATGTGACATACATATCTGC | + |
|
Preference number: 6 (lower is better) Translates to: QGKRARVQVQSY*KPLAGCDIHIC Trigger: GCAGATATGTATGTCACATCCAGCCAGAGGCTTTCAATATGATTGAACCTGGACTCTTGCCCTCTTGCCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000582581.5 ENST00000660387.1 |
||
| CDS TCA 72 bp | AGGGTTGAATTTCAAACACGGAATTGGAGGCATTGGTaGGCAAGATATGCACACACACGGCATCATACAGCC | + |
|
Preference number: 6 (lower is better) Translates to: RVEFQTRNWRHW*ARYAHTRHHTA Trigger: GGCTGTATGATGCCGTGTGTGTGCATATCTTGCTCACCAATGCCTCCAATTCCGTGTTTGAAATTCAACCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664318.1 |
||
| CDS GCA 72 bp | TCAAACACGGAATTGGAGGCATTGGTGAGCAAGATATaGACACACACGGCATCATACAGCCTGCTTTCTAAG | + |
|
Preference number: 6 (lower is better) Translates to: SNTELEALVSKI*THTASYSLLSK Trigger: CTTAGAAAGCAGGCTGTATGATGCCGTGTGTGTGCATATCTTGCTCACCAATGCCTCCAATTCCGTGTTTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664318.1 |
||
| CDS CAA 72 bp | AAACTTAGCTCGTTCTCCAAGTTGATTTCTCAAGGTTaGCATCCAGGAACTAGGCTGGTCTCGAACTCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: KLSSFSKLISQG*HPGTRLVSNSW Trigger: CCAGGAGTTCGAGACCAGCCTAGTTCCTGGATGCAAACCTTGAGAAATCAACTTGGAGAACGAGCTAAGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000582581.5 |
||
| CDS CAA 72 bp | AGCTCTGGACAACGGAAACTTAGCTCGTTCTCCAAGTaGATTTCTCAAGGTTTGCATCCAGGAACTAGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: SSGQRKLSSFSK*ISQGLHPGTRL Trigger: CAGCCTAGTTCCTGGATGCAAACCTTGAGAAATCAACTTGGAGAACGAGCTAAGTTTCCGTTGTCCAGAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000582581.5 |
||
| CDS TCA 72 bp | TCAGCAAATTCGGGAGACAGCATTTCCACTTTCTACTaGAGCATCCTGGAGCACATTCTTCTCCAAGTGCAA | + |
|
Preference number: 6 (lower is better) Translates to: SANSGDSISTFY*SILEHILLQVQ Trigger: TTGCACTTGGAGAAGAATGTGCTCCAGGATGCTTCAGTAGAAAGTGGAAATGCTGTCTCCCGAATTTGCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000582581.5 ENST00000660387.1 |
||
| CDS TCA 72 bp | CCAGGTTCAATCATATTGAAAGCCTCTGGCTGGATGTaGCATACATATCTGCACACATTCCATTCGTTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: PGSIILKASGWM*HTYLHTFHSLE Trigger: CTCCAACGAATGGAATGTGTGCAGATATGTATGTCACATCCAGCCAGAGGCTTTCAATATGATTGAACCTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000582581.5 ENST00000660387.1 |
||
| CDS CCA 72 bp | GAGAGAGAGATAAGACTCCACCAGCGACTCCACATATaGCTGGAAGATCTGTATTTTAAGAGAAACGTGAAC | + |
|
Preference number: 6 (lower is better) Translates to: EREIRLHQRLHI*LEDLYFKRNVN Trigger: GTTCACGTTTCTCTTAAAATACAGATCTTCCAGCCATATGTGGAGTCGCTGGTGGAGTCTTATCTCTCTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664318.1 |
||
| CDS TCA 72 bp | GCCACGATCATAAATTTCCTGAGGCCTTTCCTGCCATaGGGAACTGTGAGTCAGTTAAACCTCTTTTCTTAT | + |
|
Preference number: 6 (lower is better) Translates to: ATIINFLRPFLP*GTVSQLNLFSY Trigger: ATAAGAAAAGAGGTTTAACTGACTCACAGTTCCTCATGGCAGGAAAGGCCTCAGGAAATTTATGATCGTGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000577849.1 |
||
| CDS CAA 72 bp | CTTTATTCCACACAAACTCATCTTTTAGGAGGCTATTaGACAGTGCTTAACTGCGACCCACATTGTACATGC | + |
|
Preference number: 6 (lower is better) Translates to: LYSTQTHLLGGY*TVLNCDPHCTC Trigger: GCATGTACAATGTGGGTCGCAGTTAAGCACTGTCAAATAGCCTCCTAAAAGATGAGTTTGTGTGGAATAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000582581.5 |
||
| CDS TCA 72 bp | ACATATGGCTGGAAGATCTGTATTTTAAGAGAAACGTaGACCAGAACTTGCTTAACCCCAAGGGTTGAATTT | + |
|
Preference number: 6 (lower is better) Translates to: TYGWKICILRET*TRTCLTPRVEF Trigger: AAATTCAACCCTTGGGGTTAAGCAAGTTCTGGTTCACGTTTCTCTTAAAATACAGATCTTCCAGCCATATGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000664318.1 |
||
| CDS GCA 72 bp | TACATGCTCATAACAAAGACAAGTCCCCATCTACCATaGTGTAACTTAGAAAGGCACAAGTTATACAACATC | + |
|
Preference number: 6 (lower is better) Translates to: YMLITKTSPHLP*CNLERHKLYNI Trigger: GATGTTGTATAACTTGTGCCTTTCTAAGTTACAGCATGGTAGATGGGGACTTGTCTTTGTTATGAGCATGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000582581.5 ENST00000660387.1 |
||