RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for VSTM2A (Homo sapiens)

Ensembl gene IDs: ENSG00000170419

Ensembl transcript IDs: ENST00000302287.7, ENST00000402613.4, ENST00000404951.5, ENST00000407838.7, ENST00000466888.5, ENST00000469952.1, ENST00000495904.1, ENST00000498834.5

Found 512 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ATCCCATGTCACGTGTTTGAGGAAATCGGGACGGCCGCGGGGTTGTaGAGGGTACTGCTCATTCCACGAAGCCTTTATCCCACATCAAGG +
Preference number: 1 (lower is better)
Translates to: IPCHVFEEIGTAAGL*RVLLIPRSLYPTSR
Trigger: CCTTGATGTGGGATAAAGGCTTCGTGGAATGAGCAGTACCCTGCACAACCCCGCGGCCGTCCCGATTTCCTCAAACACGTGACATGGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302287.7
3UTR CCA 90 bp AACTTGCACAGCTGCCTTCAGAATCCTGTGACTAAGCTTCTAAATTaGCCTGGAAGGCAAATTCACAGAGGAGTTGCCTTATCTCTGCAC +
Preference number: 1 (lower is better)
Translates to: NLHSCLQNPVTKLLN*PGRQIHRGVALSLH
Trigger: GTGCAGAGATAAGGCAACTCCTCTGTGAATTTGCCTTCCAGGCCAATTTAGAAGCTTAGTCACAGGATTCTGAAGGCAGCTGTGCAAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302287.7
3UTR GCA 90 bp GGCTTCAGAGAGGCTAAGCCATCTGTTCATCAGACTGACATAAATTaGAATGACCAAGGCATGCCAGGAGAGTTGCTCATCTACATTATA +
Preference number: 1 (lower is better)
Translates to: GFREAKPSVHQTDIN*NDQGMPGELLIYII
Trigger: TATAATGTAGATGAGCAACTCTCCTGGCATGCCTTGGTCATTGCAATTTATGTCAGTCTGATGAACAGATGGCTTAGCCTCTCTGAAGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302287.7
3UTR GCA 90 bp ACTGCATACATTAATGCCATTCAGAACAGCTTTAACTTGCACAGCTaGCTTCAGAATCCTGTGACTAAGCTTCTAAATTGGCCTGGAAGG +
Preference number: 1 (lower is better)
Translates to: TAYINAIQNSFNLHS*LQNPVTKLLNWPGR
Trigger: CCTTCCAGGCCAATTTAGAAGCTTAGTCACAGGATTCTGAAGGCAGCTGTGCAAGTTAAAGCTGTTCTGAATGGCATTAATGTATGCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302287.7
3UTR TCA 90 bp TCCATAGTAAATATTCCCTATCCTGATGACATTCAGGCCAACCCTTaGGCAGTCAGTGAGATGATTTTAGTCGCCGAAAGAAAAGGGAAA +
Preference number: 1 (lower is better)
Translates to: SIVNIPYPDDIQANP*AVSEMILVAERKGK
Trigger: TTTCCCTTTTCTTTCGGCGACTAAAATCATCTCACTGACTGCTCAAGGGTTGGCCTGAATGTCATCAGGATAGGGAATATTTACTATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
3UTR TCA 90 bp ATCAAAAGCCCTTGGAGAATAGTCCTGCTTAGAGCTATGGGTCGCTaGAAATGCATGATATGGCATGTCTCTCTCATTTACATTTTGATT +
Preference number: 1 (lower is better)
Translates to: IKSPWRIVLLRAMGR*KCMIWHVSLIYILI
Trigger: AATCAAAATGTAAATGAGAGAGACATGCCATATCATGCATTTTCAGCGACCCATAGCTCTAAGCAGGACTATTCTCCAAGGGCTTTTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302287.7
3UTR TCA 90 bp TGTGCGTGTGTGTGTGTGTGTGTGTGTATTCAGGACGATATGAGATaGGATCTCAGAAATCATCCTGGTGAAGTAATCAGACTTTTTAAT +
Preference number: 1 (lower is better)
Translates to: CACVCVCVCIQDDMR*DLRNHPGEVIRLFN
Trigger: ATTAAAAAGTCTGATTACTTCACCAGGATGATTTCTGAGATCTCATCTCATATCGTCCTGAATACACACACACACACACACACACGCACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302287.7
3UTR TCA 90 bp CTTTATCCCACATCAAGGTTAAAACTTCCACGCATTTCCATTGGCTaGATGACTGCATACATTAATGCCATTCAGAACAGCTTTAACTTG +
Preference number: 1 (lower is better)
Translates to: LYPTSRLKLPRISIG*MTAYINAIQNSFNL
Trigger: CAAGTTAAAGCTGTTCTGAATGGCATTAATGTATGCAGTCATTCAGCCAATGGAAATGCGTGGAAGTTTTAACCTTGATGTGGGATAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302287.7
3UTR GCA 90 bp GAATATGCACTTTCCAGAATGAAGCAGAGGACAATAGAGACCATCTaGAGCTGTCAAACCTGTGGAAGTGAAACAATGAATTACAAAATT +
Preference number: 1 (lower is better)
Translates to: EYALSRMKQRTIETI*SCQTCGSETMNYKI
Trigger: AATTTTGTAATTCATTGTTTCACTTCCACAGGTTTGACAGCTGCAGATGGTCTCTATTGTCCTCTGCTTCATTCTGGAAAGTGCATATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
3UTR-3UTR TCA 90 bp TTTGTGCTCCCTTCATCCCATGTCACGTGTTTGAGGAAATCGGGACGGCCGCGGGCACCACTAGGGGACTaGCGGGGTGCACCCACATGC +
Preference number: 2 (lower is better)
Translates to: FVLPSSHVTCLRKSGRPRAPLGD*RGAPTC
Trigger: GCATGTGGGTGCACCCCGTCAGTCCCCTAGTGGTGC...CCGCGGCCGTCCCGATTTCCTCAAACACGTGACATGGGATGAAGGGAGCACAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302287.7
3UTR-3UTR TCA 90 bp TTTGTGCTCCCTTCATCCCATGTCACGTGTTTGAGGAAATCGGGACGGCCGCGGTGCACCCACATGCTTTaGGCTCTGAGTGAATTGGTG +
Preference number: 2 (lower is better)
Translates to: FVLPSSHVTCLRKSGRPRCTHML*ALSELV
Trigger: CACCAATTCACTCAGAGCTCAAAGCATGTGGGTGCA...CCGCGGCCGTCCCGATTTCCTCAAACACGTGACATGGGATGAAGGGAGCACAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302287.7
3UTR-3UTR TCA 90 bp TGCAATGACCAAGGCATGCCAGGAGAGTTGCTCATCTACATTATAAGGCAGGGCCAGATGCCCTGGAAATaGAGCACCACTAGGGGACTG +
Preference number: 2 (lower is better)
Translates to: CNDQGMPGELLIYIIRQGQMPWK*STTRGL
Trigger: CAGTCCCCTAGTGGTGCTTCATTTCCAGGGCATCTG...GCCCTGCCTTATAATGTAGATGAGCAACTCTCCTGGCATGCCTTGGTCATTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302287.7
3UTR-3UTR TCA 90 bp TTTGTGCTCCCTTCATCCCATGTCACGTGTTTGAGGAAATCGGGACGGCCGCGGGTCGCTGAAAATGCATaGTATGGCATGTCTCTCTCA +
Preference number: 2 (lower is better)
Translates to: FVLPSSHVTCLRKSGRPRVAENA*YGMSLS
Trigger: TGAGAGAGACATGCCATATCATGCATTTTCAGCGAC...CCGCGGCCGTCCCGATTTCCTCAAACACGTGACATGGGATGAAGGGAGCACAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302287.7
3UTR CAA 90 bp GCATGTGATAGCCTCTTCATTTATGCTTCCGGAAGCAGGCGCTCCTaGTGTAGTGAATTAGAGTACAGTGGGTGCAGGGTGGTGCTTGGA +
Preference number: 2 (lower is better)
Translates to: ACDSLFIYASGSRRS*CSELEYSGCRVVLG
Trigger: TCCAAGCACCACCCTGCACCCACTGTACTCTAATTCACTACACAAGGAGCGCCTGCTTCCGGAAGCATAAATGAAGAGGCTATCACATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407838.7
3UTR-3UTR GCA 90 bp TTTGTGCTCCCTTCATCCCATGTCACGTGTTTGAGGAAATCGGGACGGCCGCGGAGAACAGCTTTAACTTaGACAGCTGCCTTCAGAATC +
Preference number: 2 (lower is better)
Translates to: FVLPSSHVTCLRKSGRPRRTALT*TAAFRI
Trigger: GATTCTGAAGGCAGCTGTGCAAGTTAAAGCTGTTCT...CCGCGGCCGTCCCGATTTCCTCAAACACGTGACATGGGATGAAGGGAGCACAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302287.7
3UTR-3UTR GCA 90 bp TGCAATGACCAAGGCATGCCAGGAGAGTTGCTCATCTACATTATAAGGCAGGGCTTGGTGCAGGCTCGGTaGTCACCTCTCATAATCACT +
Preference number: 2 (lower is better)
Translates to: CNDQGMPGELLIYIIRQGLVQAR*SPLIIT
Trigger: AGTGATTATGAGAGGTGAGCACCGAGCCTGCACCAA...GCCCTGCCTTATAATGTAGATGAGCAACTCTCCTGGCATGCCTTGGTCATTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302287.7
3UTR-3UTR TCA 90 bp ACTTTCCAGAATGAAGCAGAGGACAATAGAGACCATCTGCAGCTGTCAAACCTGCCCTTGAGCAGTCAGTaGGATGATTTTAGTCGCCGA +
Preference number: 2 (lower is better)
Translates to: TFQNEAEDNRDHLQLSNLPLSSQ*DDFSRR
Trigger: TCGGCGACTAAAATCATCTCACTGACTGCTCAAGGG...CAGGTTTGACAGCTGCAGATGGTCTCTATTGTCCTCTGCTTCATTCTGGAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
3UTR-3UTR TCA 90 bp GAATATGCACTTTCCAGAATGAAGCAGAGGACAATAGAGACCATCTGCAGCTGTCCCTTGAGCAGTCAGTaGGATGATTTTAGTCGCCGA +
Preference number: 2 (lower is better)
Translates to: EYALSRMKQRTIETICSCPLSSQ*DDFSRR
Trigger: TCGGCGACTAAAATCATCTCACTGACTGCTCAAGGG...ACAGCTGCAGATGGTCTCTATTGTCCTCTGCTTCATTCTGGAAAGTGCATATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
3UTR-3UTR GCA 90 bp CACACATTGGGCTTCAGAGAGGCTAAGCCATCTGTTCATCAGACTGACATAAATGGTTGTGCAGGGTACTaGTCATTCCACGAAGCCTTT +
Preference number: 2 (lower is better)
Translates to: HTLGFREAKPSVHQTDINGCAGY*SFHEAF
Trigger: AAAGGCTTCGTGGAATGAGCAGTACCCTGCACAACC...ATTTATGTCAGTCTGATGAACAGATGGCTTAGCCTCTCTGAAGCCCAATGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302287.7
3UTR-3UTR GCA 90 bp TGCAATGACCAAGGCATGCCAGGAGAGTTGCTCATCTACATTATAAGGCAGGGCAAGTCAGTATGTTTGTaGTCCCTTCATCCCATGTCA +
Preference number: 2 (lower is better)
Translates to: CNDQGMPGELLIYIIRQGKSVCL*SLHPMS
Trigger: TGACATGGGATGAAGGGAGCACAAACATACTGACTT...GCCCTGCCTTATAATGTAGATGAGCAACTCTCCTGGCATGCCTTGGTCATTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302287.7
3UTR-3UTR TCA 90 bp AACATGAATTTAGGGAATTATGGTGAGTGCTTCACCTTCCCCACATTCGCCTCCAAAAATCAGCTTGCATaGGGGTCGCAGTACATCTAC +
Preference number: 2 (lower is better)
Translates to: NMNLGNYGECFTFPTFASKNQLA*GSQYIY
Trigger: GTAGATGTACTGCGACCCTCATGCAAGCTGATTTTT...GGAGGCGAATGTGGGGAAGGTGAAGCACTCACCATAATTCCCTAAATTCATGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
3UTR-3UTR TCA 90 bp CACACATTGGGCTTCAGAGAGGCTAAGCCATCTGTTCATCAGACTGACATAAATAGAGCTATGGGTCGCTaGAAATGCATGATATGGCAT +
Preference number: 2 (lower is better)
Translates to: HTLGFREAKPSVHQTDINRAMGR*KCMIWH
Trigger: ATGCCATATCATGCATTTTCAGCGACCCATAGCTCT...ATTTATGTCAGTCTGATGAACAGATGGCTTAGCCTCTCTGAAGCCCAATGTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302287.7
3UTR-3UTR TCA 90 bp ACTTTCCAGAATGAAGCAGAGGACAATAGAGACCATCTGCAGCTGTCAAACCTGAGCACTTGCCACCATTaGACAAGAACTGTAATCAAG +
Preference number: 2 (lower is better)
Translates to: TFQNEAEDNRDHLQLSNLSTCHH*TRTVIK
Trigger: CTTGATTACAGTTCTTGTTCAATGGTGGCAAGTGCT...CAGGTTTGACAGCTGCAGATGGTCTCTATTGTCCTCTGCTTCATTCTGGAAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
3UTR-3UTR CCA 90 bp TGCAATGACCAAGGCATGCCAGGAGAGTTGCTCATCTACATTATAAGGCAGGGCAAAATCAAAAGCCCTTaGAGAATAGTCCTGCTTAGA +
Preference number: 2 (lower is better)
Translates to: CNDQGMPGELLIYIIRQGKIKSP*RIVLLR
Trigger: TCTAAGCAGGACTATTCTCCAAGGGCTTTTGATTTT...GCCCTGCCTTATAATGTAGATGAGCAACTCTCCTGGCATGCCTTGGTCATTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302287.7
3UTR-3UTR TCA 90 bp GAATATGCACTTTCCAGAATGAAGCAGAGGACAATAGAGACCATCTGCAGCTGTAGCACTTGCCACCATTaGACAAGAACTGTAATCAAG +
Preference number: 2 (lower is better)
Translates to: EYALSRMKQRTIETICSCSTCHH*TRTVIK
Trigger: CTTGATTACAGTTCTTGTTCAATGGTGGCAAGTGCT...ACAGCTGCAGATGGTCTCTATTGTCCTCTGCTTCATTCTGGAAAGTGCATATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
3UTR-3UTR GCA 90 bp CTACATTATAAGGCAGGGCAAACTCAGAGAACCCTAATCCAAGTGCCCTACAAAGAGTTGCCTTATCTCTaGACCACTTACAGTCTTCAA +
Preference number: 2 (lower is better)
Translates to: LHYKAGQTQRTLIQVPYKELPYL*TTYSLQ
Trigger: TTGAAGACTGTAAGTGGTGCAGAGATAAGGCAACTC...TTTGTAGGGCACTTGGATTAGGGTTCTCTGAGTTTGCCCTGCCTTATAATGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302287.7
3UTR-3UTR GCA 90 bp CTACATTATAAGGCAGGGCAAACTCAGAGAACCCTAATCCAAGTGCCCTACAAAAATTCACAGAGGAGTTaGCTTATCTCTGCACCACTT +
Preference number: 2 (lower is better)
Translates to: LHYKAGQTQRTLIQVPYKNSQRS*LISAPL
Trigger: AAGTGGTGCAGAGATAAGGCAACTCCTCTGTGAATT...TTTGTAGGGCACTTGGATTAGGGTTCTCTGAGTTTGCCCTGCCTTATAATGTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302287.7
3UTR-3UTR GCA 90 bp CTACATTATAAGGCAGGGCAAACTCAGAGAACCCTAATCCAAGTGCCCTACAAATTTAACTTGCACAGCTaGCTTCAGAATCCTGTGACT +
Preference number: 2 (lower is better)
Translates to: LHYKAGQTQRTLIQVPYKFNLHS*LQNPVT
Trigger: AGTCACAGGATTCTGAAGGCAGCTGTGCAAGTTAAA...TTTGTAGGGCACTTGGATTAGGGTTCTCTGAGTTTGCCCTGCCTTATAATGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302287.7
3UTR-3UTR GCA 90 bp GGGACCTGCCATCATCTTTTGCATATTGTATTTAGCCAACAACCAAATTTTAATGTGGGTGCAGGGTGGTaGTTGGAGTTTAGGGTCAAC +
Preference number: 2 (lower is better)
Translates to: GTCHHLLHIVFSQQPNFNVGAGW*LEFRVN
Trigger: GTTGACCCTAAACTCCAAGCACCACCCTGCACCCAC...ATTAAAATTTGGTTGTTGGCTAAATACAATATGCAAAAGATGATGGCAGGTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407838.7
3UTR-3UTR CCA 90 bp GTACATTCTTCACAGTCAAGAGACTCTCAAACCTCAATAAACACCATGTATAAAACAGTGGGTGCAGGGTaGTGCTTGGAGTTTAGGGTC +
Preference number: 2 (lower is better)
Translates to: VHSSQSRDSQTSINTMYKTVGAG*CLEFRV
Trigger: GACCCTAAACTCCAAGCACCACCCTGCACCCACTGT...TTTATACATGGTGTTTATTGAGGTTTGAGAGTCTCTTGACTGTGAAGAATGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407838.7
3UTR-3UTR TCA 90 bp TTACACATAAGTAAAGTGAGTGACTGGACTGCCCCAGCTTCTGAAATCGAAATTATCATCACAGGCAGCTaGGGTTTCTCCTTCAAAATC +
Preference number: 2 (lower is better)
Translates to: LHISKVSDWTAPASEIEIIITGS*GFSFKI
Trigger: GATTTTGAAGGAGAAACCTCAGCTGCCTGTGATGAT...AATTTCGATTTCAGAAGCTGGGGCAGTCCAGTCACTCACTTTACTTATGTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302287.7
3UTR-3UTR TCA 90 bp CACACATTGGGCTTCAGAGAGGCTAAGCCATCTGTTCATCAGACTGACATAAATGTATTCAGGACGATATaGGATGAGATCTCAGAAATC +
Preference number: 2 (lower is better)
Translates to: HTLGFREAKPSVHQTDINVFRTI*DEISEI
Trigger: GATTTCTGAGATCTCATCTCATATCGTCCTGAATAC...ATTTATGTCAGTCTGATGAACAGATGGCTTAGCCTCTCTGAAGCCCAATGTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302287.7
3UTR-3UTR TCA 90 bp ACTTTCCAGAATGAAGCAGAGGACAATAGAGACCATCTGCAGCTGTCAAACCTGGCAGTACATCTACTTTaGAGTTATAGCACACATACT +
Preference number: 2 (lower is better)
Translates to: TFQNEAEDNRDHLQLSNLAVHLL*SYSTHT
Trigger: AGTATGTGTGCTATAACTTCAAAGTAGATGTACTGC...CAGGTTTGACAGCTGCAGATGGTCTCTATTGTCCTCTGCTTCATTCTGGAAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
3UTR-3UTR GCA 90 bp TTACACATAAGTAAAGTGAGTGACTGGACTGCCCCAGCTTCTGAAATCGAAATTCCTCTCATAATCACTTaGACTGAACTAGGTCTCCGA +
Preference number: 2 (lower is better)
Translates to: LHISKVSDWTAPASEIEIPLIIT*TELGLR
Trigger: TCGGAGACCTAGTTCAGTGCAAGTGATTATGAGAGG...AATTTCGATTTCAGAAGCTGGGGCAGTCCAGTCACTCACTTTACTTATGTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302287.7
3UTR-3UTR GCA 90 bp AAATGTTCTAACATGAATTTAGGGAATTATGGTGAGTGCTTCACCTTCCCCACAACAATAGAGACCATCTaGAGCTGTCAAACCTGTGGA +
Preference number: 2 (lower is better)
Translates to: KCSNMNLGNYGECFTFPTTIETI*SCQTCG
Trigger: TCCACAGGTTTGACAGCTGCAGATGGTCTCTATTGT...TGTGGGGAAGGTGAAGCACTCACCATAATTCCCTAAATTCATGTTAGAACATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
3UTR-3UTR CCA 90 bp TTACACATAAGTAAAGTGAGTGACTGGACTGCCCCAGCTTCTGAAATCGAAATTTCCACGCATTTCCATTaGCTGAATGACTGCATACAT +
Preference number: 2 (lower is better)
Translates to: LHISKVSDWTAPASEIEISTHFH*LNDCIH
Trigger: ATGTATGCAGTCATTCAGCCAATGGAAATGCGTGGA...AATTTCGATTTCAGAAGCTGGGGCAGTCCAGTCACTCACTTTACTTATGTGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302287.7
3UTR-3UTR CCA 90 bp TTACACATAAGTAAAGTGAGTGACTGGACTGCCCCAGCTTCTGAAATCGAAATTACTAAGCTTCTAAATTaGCCTGGAAGGCAAATTCAC +
Preference number: 2 (lower is better)
Translates to: LHISKVSDWTAPASEIEITKLLN*PGRQIH
Trigger: GTGAATTTGCCTTCCAGGCCAATTTAGAAGCTTAGT...AATTTCGATTTCAGAAGCTGGGGCAGTCCAGTCACTCACTTTACTTATGTGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302287.7
3UTR-3UTR TCA 90 bp GTACATTCTTCACAGTCAAGAGACTCTCAAACCTCAATAAACACCATGTATAAAAAAAATCAGCTTGCATaGGGGTCGCAGTACATCTAC +
Preference number: 2 (lower is better)
Translates to: VHSSQSRDSQTSINTMYKKNQLA*GSQYIY
Trigger: GTAGATGTACTGCGACCCTCATGCAAGCTGATTTTT...TTTATACATGGTGTTTATTGAGGTTTGAGAGTCTCTTGACTGTGAAGAATGTAC
39% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
3UTR TCA 72 bp ACCACTAGGGGACTGACGGGGTGCACCCACATGCTTTaGGCTCTGAGTGAATTGGTGCAGGCTCGGTGCTCA +
Preference number: 3 (lower is better)
Translates to: TTRGLTGCTHML*ALSELVQARCS
Trigger: TGAGCACCGAGCCTGCACCAATTCACTCAGAGCTCAAAGCATGTGGGTGCACCCCGTCAGTCCCCTAGTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302287.7
3UTR GCA 72 bp CACGTGTTTGAGGAAATCGGGACGGCCGCGGGGTTGTaGAGGGTACTGCTCATTCCACGAAGCCTTTATCCC +
Preference number: 3 (lower is better)
Translates to: HVFEEIGTAAGL*RVLLIPRSLYP
Trigger: GGGATAAAGGCTTCGTGGAATGAGCAGTACCCTGCACAACCCCGCGGCCGTCCCGATTTCCTCAAACACGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302287.7
3UTR-3UTR CAA 90 bp TGCAATGACCAAGGCATGCCAGGAGAGTTGCTCATCTACATTATAAGGCAGGGCGGGACGGCCGCGGGGTaGTGCAGGGTACTGCTCATT +
Preference number: 3 (lower is better)
Translates to: CNDQGMPGELLIYIIRQGGTAAG*CRVLLI
Trigger: AATGAGCAGTACCCTGCACAACCCCGCGGCCGTCCC...GCCCTGCCTTATAATGTAGATGAGCAACTCTCCTGGCATGCCTTGGTCATTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302287.7
3UTR TCA 72 bp GTATGTTTGTGCTCCCTTCATCCCATGTCACGTGTTTaGGGAAATCGGGACGGCCGCGGGGTTGTGCAGGGT +
Preference number: 3 (lower is better)
Translates to: VCLCSLHPMSRV*GNRDGRGVVQG
Trigger: ACCCTGCACAACCCCGCGGCCGTCCCGATTTCCTCAAACACGTGACATGGGATGAAGGGAGCACAAACATAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302287.7
3UTR GCA 72 bp AGGAAATCGGGACGGCCGCGGGGTTGTGCAGGGTACTaGTCATTCCACGAAGCCTTTATCCCACATCAAGGT +
Preference number: 3 (lower is better)
Translates to: RKSGRPRGCAGY*SFHEAFIPHQG
Trigger: ACCTTGATGTGGGATAAAGGCTTCGTGGAATGAGCAGTACCCTGCACAACCCCGCGGCCGTCCCGATTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302287.7
3UTR-3UTR CAA 90 bp TTACACATAAGTAAAGTGAGTGACTGGACTGCCCCAGCTTCTGAAATCGAAATTTCCCATGTCACGTGTTaGAGGAAATCGGGACGGCCG +
Preference number: 3 (lower is better)
Translates to: LHISKVSDWTAPASEIEISHVTC*RKSGRP
Trigger: CGGCCGTCCCGATTTCCTCAAACACGTGACATGGGA...AATTTCGATTTCAGAAGCTGGGGCAGTCCAGTCACTCACTTTACTTATGTGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302287.7
3UTR-3UTR CAA 90 bp GGAATTATGGTGAGTGCTTCACCTTCCCCACATTCGCCTCCTAGGCAAATTTTCCCTTTTGATCTCTGTTaGCTTCCTGAAGATGCTGGG +
Preference number: 3 (lower is better)
Translates to: GIMVSASPSPHSPPRQIFPFDLC*LPEDAG
Trigger: CCCAGCATCTTCAGGAAGCAAACAGAGATCAAAAGG...GAAAATTTGCCTAGGAGGCGAATGTGGGGAAGGTGAAGCACTCACCATAATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
3UTR-3UTR CAA 90 bp AACATGAATTTAGGGAATTATGGTGAGTGCTTCACCTTCCCCACATTCGCCTCCCCTTTTGATCTCTGTTaGCTTCCTGAAGATGCTGGG +
Preference number: 3 (lower is better)
Translates to: NMNLGNYGECFTFPTFASPFDLC*LPEDAG
Trigger: CCCAGCATCTTCAGGAAGCAAACAGAGATCAAAAGG...GGAGGCGAATGTGGGGAAGGTGAAGCACTCACCATAATTCCCTAAATTCATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
3UTR GCA 72 bp GAGGCTAAGCCATCTGTTCATCAGACTGACATAAATTaGAATGACCAAGGCATGCCAGGAGAGTTGCTCATC +
Preference number: 3 (lower is better)
Translates to: EAKPSVHQTDIN*NDQGMPGELLI
Trigger: GATGAGCAACTCTCCTGGCATGCCTTGGTCATTGCAATTTATGTCAGTCTGATGAACAGATGGCTTAGCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302287.7
3UTR-3UTR CAA 90 bp GAGATTGGCCATAACCAGCACTTGCCACCATTGAACAAGAACTGTAATCAAGAAGGAAGCAGGCGCTCCTaGTGTAGTGAATTAGAGTAC +
Preference number: 3 (lower is better)
Translates to: EIGHNQHLPPLNKNCNQEGSRRS*CSELEY
Trigger: GTACTCTAATTCACTACACAAGGAGCGCCTGCTTCC...TTCTTGATTACAGTTCTTGTTCAATGGTGGCAAGTGCTGGTTATGGCCAATCTC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407838.7
3UTR-3UTR CAA 90 bp ACTTTCCAGAATGAAGCAGAGGACAATAGAGACCATCTGCAGCTGTCAAACCTGATAAACCTCCTAGGATaGACGGAGATTGGCCATAAC +
Preference number: 3 (lower is better)
Translates to: TFQNEAEDNRDHLQLSNLINLLG*TEIGHN
Trigger: GTTATGGCCAATCTCCGTCAATCCTAGGAGGTTTAT...CAGGTTTGACAGCTGCAGATGGTCTCTATTGTCCTCTGCTTCATTCTGGAAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
3UTR GCA 72 bp TCTAAATTGGCCTGGAAGGCAAATTCACAGAGGAGTTaGCTTATCTCTGCACCACTTACAGTCTTCAATCCC +
Preference number: 3 (lower is better)
Translates to: SKLAWKANSQRS*LISAPLTVFNP
Trigger: GGGATTGAAGACTGTAAGTGGTGCAGAGATAAGGCAACTCCTCTGTGAATTTGCCTTCCAGGCCAATTTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302287.7
3UTR CCA 72 bp AGCTGCCTTCAGAATCCTGTGACTAAGCTTCTAAATTaGCCTGGAAGGCAAATTCACAGAGGAGTTGCCTTA +
Preference number: 3 (lower is better)
Translates to: SCLQNPVTKLLN*PGRQIHRGVAL
Trigger: TAAGGCAACTCCTCTGTGAATTTGCCTTCCAGGCCAATTTAGAAGCTTAGTCACAGGATTCTGAAGGCAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302287.7
3UTR-3UTR CAA 90 bp CTACATTATAAGGCAGGGCAAACTCAGAGAACCCTAATCCAAGTGCCCTACAAACAGAACAGCTTTAACTaGCACAGCTGCCTTCAGAAT +
Preference number: 3 (lower is better)
Translates to: LHYKAGQTQRTLIQVPYKQNSFN*HSCLQN
Trigger: ATTCTGAAGGCAGCTGTGCAAGTTAAAGCTGTTCTG...TTTGTAGGGCACTTGGATTAGGGTTCTCTGAGTTTGCCCTGCCTTATAATGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302287.7
3UTR-3UTR CAA 90 bp GAGATTGGCCATAACCAGCACTTGCCACCATTGAACAAGAACTGTAATCAAGAACCTTTTGATCTCTGTTaGCTTCCTGAAGATGCTGGG +
Preference number: 3 (lower is better)
Translates to: EIGHNQHLPPLNKNCNQEPFDLC*LPEDAG
Trigger: CCCAGCATCTTCAGGAAGCAAACAGAGATCAAAAGG...TTCTTGATTACAGTTCTTGTTCAATGGTGGCAAGTGCTGGTTATGGCCAATCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
3UTR TCA 72 bp CCTTGGAGAATAGTCCTGCTTAGAGCTATGGGTCGCTaGAAATGCATGATATGGCATGTCTCTCTCATTTAC +
Preference number: 3 (lower is better)
Translates to: PWRIVLLRAMGR*KCMIWHVSLIY
Trigger: GTAAATGAGAGAGACATGCCATATCATGCATTTTCAGCGACCCATAGCTCTAAGCAGGACTATTCTCCAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302287.7
3UTR TCA 72 bp AATATTCCCTATCCTGATGACATTCAGGCCAACCCTTaGGCAGTCAGTGAGATGATTTTAGTCGCCGAAAGA +
Preference number: 3 (lower is better)
Translates to: NIPYPDDIQANP*AVSEMILVAER
Trigger: TCTTTCGGCGACTAAAATCATCTCACTGACTGCTCAAGGGTTGGCCTGAATGTCATCAGGATAGGGAATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
3UTR-3UTR CAA 90 bp TTACACATAAGTAAAGTGAGTGACTGGACTGCCCCAGCTTCTGAAATCGAAATTACAAATCCACACACATaGGGCTTCAGAGAGGCTAAG +
Preference number: 3 (lower is better)
Translates to: LHISKVSDWTAPASEIEITNPHT*GFREAK
Trigger: CTTAGCCTCTCTGAAGCCCAATGTGTGTGGATTTGT...AATTTCGATTTCAGAAGCTGGGGCAGTCCAGTCACTCACTTTACTTATGTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302287.7
3UTR-3UTR CAA 90 bp AAAACCAGACAGTGTACATTCTTCACAGTCAAGAGACTCTCAAACCTCAATAAAGGTGCAGGGTGGTGCTaGGAGTTTAGGGTCAACTTT +
Preference number: 3 (lower is better)
Translates to: KTRQCTFFTVKRLSNLNKGAGWC*EFRVNF
Trigger: AAAGTTGACCCTAAACTCCAAGCACCACCCTGCACC...TTTATTGAGGTTTGAGAGTCTCTTGACTGTGAAGAATGTACACTGTCTGGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407838.7
3UTR-3UTR CAA 90 bp GAATATGCACTTTCCAGAATGAAGCAGAGGACAATAGAGACCATCTGCAGCTGTGTAATGTCCTCCTTGTaGACTTGCAGTGTTGATAGT +
Preference number: 3 (lower is better)
Translates to: EYALSRMKQRTIETICSCVMSSL*TCSVDS
Trigger: ACTATCAACACTGCAAGTCAACAAGGAGGACATTAC...ACAGCTGCAGATGGTCTCTATTGTCCTCTGCTTCATTCTGGAAAGTGCATATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
3UTR-3UTR CAA 90 bp AACATGAATTTAGGGAATTATGGTGAGTGCTTCACCTTCCCCACATTCGCCTCCAAAGTAATGTCCTCCTaGTTGACTTGCAGTGTTGAT +
Preference number: 3 (lower is better)
Translates to: NMNLGNYGECFTFPTFASKVMSS*LTCSVD
Trigger: ATCAACACTGCAAGTCAACAAGGAGGACATTACTTT...GGAGGCGAATGTGGGGAAGGTGAAGCACTCACCATAATTCCCTAAATTCATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
3UTR-3UTR CAA 90 bp AAATGTTCTAACATGAATTTAGGGAATTATGGTGAGTGCTTCACCTTCCCCACAGGCCATAACCAGCACTaGCCACCATTGAACAAGAAC +
Preference number: 3 (lower is better)
Translates to: KCSNMNLGNYGECFTFPTGHNQH*PPLNKN
Trigger: GTTCTTGTTCAATGGTGGCAAGTGCTGGTTATGGCC...TGTGGGGAAGGTGAAGCACTCACCATAATTCCCTAAATTCATGTTAGAACATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
3UTR GCA 72 bp CTTTCCAGAATGAAGCAGAGGACAATAGAGACCATCTaGAGCTGTCAAACCTGTGGAAGTGAAACAATGAAT +
Preference number: 3 (lower is better)
Translates to: LSRMKQRTIETI*SCQTCGSETMN
Trigger: ATTCATTGTTTCACTTCCACAGGTTTGACAGCTGCAGATGGTCTCTATTGTCCTCTGCTTCATTCTGGAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
3UTR-3UTR CAA 90 bp TTACACATAAGTAAAGTGAGTGACTGGACTGCCCCAGCTTCTGAAATCGAAATTGGCTACTCTGTAATCTaGCCTGTAGTGTCTAACTTC +
Preference number: 3 (lower is better)
Translates to: LHISKVSDWTAPASEIEIGYSVI*PVVSNF
Trigger: GAAGTTAGACACTACAGGCAAGATTACAGAGTAGCC...AATTTCGATTTCAGAAGCTGGGGCAGTCCAGTCACTCACTTTACTTATGTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302287.7
3UTR-3UTR CAA 90 bp TACAATTTTGAATATGCACTTTCCAGAATGAAGCAGAGGACAATAGAGACCATCGGCCATAACCAGCACTaGCCACCATTGAACAAGAAC +
Preference number: 3 (lower is better)
Translates to: YNFEYALSRMKQRTIETIGHNQH*PPLNKN
Trigger: GTTCTTGTTCAATGGTGGCAAGTGCTGGTTATGGCC...GATGGTCTCTATTGTCCTCTGCTTCATTCTGGAAAGTGCATATTCAAAATTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
3UTR TCA 72 bp GTGTGTGTGTGTGTGTGTATTCAGGACGATATGAGATaGGATCTCAGAAATCATCCTGGTGAAGTAATCAGA +
Preference number: 3 (lower is better)
Translates to: VCVCVCIQDDMR*DLRNHPGEVIR
Trigger: TCTGATTACTTCACCAGGATGATTTCTGAGATCTCATCTCATATCGTCCTGAATACACACACACACACACAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302287.7
3UTR-3UTR CAA 90 bp GTACATTCTTCACAGTCAAGAGACTCTCAAACCTCAATAAACACCATGTATAAAGGCCATAACCAGCACTaGCCACCATTGAACAAGAAC +
Preference number: 3 (lower is better)
Translates to: VHSSQSRDSQTSINTMYKGHNQH*PPLNKN
Trigger: GTTCTTGTTCAATGGTGGCAAGTGCTGGTTATGGCC...TTTATACATGGTGTTTATTGAGGTTTGAGAGTCTCTTGACTGTGAAGAATGTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
3UTR-3UTR CAA 90 bp CAGTGTACATTCTTCACAGTCAAGAGACTCTCAAACCTCAATAAACACCATGTAATGATAAAAATCAGCTaGCATGAGGGTCGCAGTACA +
Preference number: 3 (lower is better)
Translates to: QCTFFTVKRLSNLNKHHVMIKIS*HEGRST
Trigger: TGTACTGCGACCCTCATGCAAGCTGATTTTTATCAT...TACATGGTGTTTATTGAGGTTTGAGAGTCTCTTGACTGTGAAGAATGTACACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
3UTR-3UTR CAA 90 bp AAATGTTCTAACATGAATTTAGGGAATTATGGTGAGTGCTTCACCTTCCCCACAATGATAAAAATCAGCTaGCATGAGGGTCGCAGTACA +
Preference number: 3 (lower is better)
Translates to: KCSNMNLGNYGECFTFPTMIKIS*HEGRST
Trigger: TGTACTGCGACCCTCATGCAAGCTGATTTTTATCAT...TGTGGGGAAGGTGAAGCACTCACCATAATTCCCTAAATTCATGTTAGAACATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
3UTR GCA 72 bp ATTAATGCCATTCAGAACAGCTTTAACTTGCACAGCTaGCTTCAGAATCCTGTGACTAAGCTTCTAAATTGG +
Preference number: 3 (lower is better)
Translates to: INAIQNSFNLHS*LQNPVTKLLNW
Trigger: CCAATTTAGAAGCTTAGTCACAGGATTCTGAAGGCAGCTGTGCAAGTTAAAGCTGTTCTGAATGGCATTAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302287.7
3UTR-3UTR CAA 90 bp AAAACCAGACAGTGTACATTCTTCACAGTCAAGAGACTCTCAAACCTCAATAAAGTAATGTCCTCCTTGTaGACTTGCAGTGTTGATAGT +
Preference number: 3 (lower is better)
Translates to: KTRQCTFFTVKRLSNLNKVMSSL*TCSVDS
Trigger: ACTATCAACACTGCAAGTCAACAAGGAGGACATTAC...TTTATTGAGGTTTGAGAGTCTCTTGACTGTGAAGAATGTACACTGTCTGGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
3UTR-3UTR CAA 90 bp GTACATTCTTCACAGTCAAGAGACTCTCAAACCTCAATAAACACCATGTATAAACCTAAAAAGGGGGTTTaGTCTGATGATAGCTTCTGT +
Preference number: 3 (lower is better)
Translates to: VHSSQSRDSQTSINTMYKPKKGV*SDDSFC
Trigger: ACAGAAGCTATCATCAGACAAAACCCCCTTTTTAGG...TTTATACATGGTGTTTATTGAGGTTTGAGAGTCTCTTGACTGTGAAGAATGTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
3UTR-3UTR CAA 90 bp GTACATTCTTCACAGTCAAGAGACTCTCAAACCTCAATAAACACCATGTATAAAGTAATGTCCTCCTTGTaGACTTGCAGTGTTGATAGT +
Preference number: 3 (lower is better)
Translates to: VHSSQSRDSQTSINTMYKVMSSL*TCSVDS
Trigger: ACTATCAACACTGCAAGTCAACAAGGAGGACATTAC...TTTATACATGGTGTTTATTGAGGTTTGAGAGTCTCTTGACTGTGAAGAATGTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
3UTR-3UTR CAA 90 bp GGGACCTGCCATCATCTTTTGCATATTGTATTTAGCCAACAACCAAATTTTAATATGATAAAAATCAGCTaGCATGAGGGTCGCAGTACA +
Preference number: 3 (lower is better)
Translates to: GTCHHLLHIVFSQQPNFNMIKIS*HEGRST
Trigger: TGTACTGCGACCCTCATGCAAGCTGATTTTTATCAT...ATTAAAATTTGGTTGTTGGCTAAATACAATATGCAAAAGATGATGGCAGGTCCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000402613.4
ENST00000407838.7
3UTR TCA 72 bp AAATCAGCTTGCATGAGGGTCGCAGTACATCTACTTTaGAGTTATAGCACACATACTATAAGCAATTTACAG +
Preference number: 3 (lower is better)
Translates to: KSACMRVAVHLL*SYSTHTISNLQ
Trigger: CTGTAAATTGCTTATAGTATGTGTGCTATAACTTCAAAGTAGATGTACTGCGACCCTCATGCAAGCTGATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
3UTR CCA 72 bp AAGTATAGGAACTTACACATAAGTAAAGTGAGTGACTaGACTGCCCCAGCTTCTGAAATCGAAATTAGAAAA +
Preference number: 3 (lower is better)
Translates to: KYRNLHISKVSD*TAPASEIEIRK
Trigger: TTTTCTAATTTCGATTTCAGAAGCTGGGGCAGTCCAGTCACTCACTTTACTTATGTGTAAGTTCCTATACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302287.7
3UTR-3UTR CAA 90 bp ATAATGATAAAAATCAGCTTGCATGAGGGTCGCAGTACATCTACTTTGAAGTTAAAAGTAATGTCCTCCTaGTTGACTTGCAGTGTTGAT +
Preference number: 3 (lower is better)
Translates to: IMIKISLHEGRSTSTLKLKVMSS*LTCSVD
Trigger: ATCAACACTGCAAGTCAACAAGGAGGACATTACTTT...TAACTTCAAAGTAGATGTACTGCGACCCTCATGCAAGCTGATTTTTATCATTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
3UTR-3UTR CAA 90 bp GTACATTCTTCACAGTCAAGAGACTCTCAAACCTCAATAAACACCATGTATAAAGATTTTACAGGCGATTaGCTCTTTGCTTTAAGAAGA +
Preference number: 3 (lower is better)
Translates to: VHSSQSRDSQTSINTMYKDFTGD*LFALRR
Trigger: TCTTCTTAAAGCAAAGAGCAAATCGCCTGTAAAATC...TTTATACATGGTGTTTATTGAGGTTTGAGAGTCTCTTGACTGTGAAGAATGTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407838.7
CDS-3UTR GCA 90 bp TTTGTGCTCCCTTCATCCCATGTCACGTGTTTGAGGAAATCGGGACGGCCGCGGCCCGCCGCTCCGGCTTaGGTGATCACTGCCCTCCCT +
Preference number: 4 (lower is better)
Translates to: FVLPSSHVTCLRKSGRPRPAAPA*VITALP
Trigger: AGGGAGGGCAGTGATCACGCAAGCCGGAGCGGCGGG...CCGCGGCCGTCCCGATTTCCTCAAACACGTGACATGGGATGAAGGGAGCACAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS-3UTR GCA 90 bp TTTGTGCTCCCTTCATCCCATGTCACGTGTTTGAGGAAATCGGGACGGCCGCGGGGCTGCCTGGCTGCCTaGTTTCAGCTACCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: FVLPSSHVTCLRKSGRPRGCLAA*FQLPGS
Trigger: GCTGCCAGGTAGCTGAAAGCAGGCAGCCAGGCAGCC...CCGCGGCCGTCCCGATTTCCTCAAACACGTGACATGGGATGAAGGGAGCACAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS-3UTR TCA 90 bp TTTGTGCTCCCTTCATCCCATGTCACGTGTTTGAGGAAATCGGGACGGCCGCGGCCCATGTCACGTGTTTaGGGAAATCGGGACGGCCGC +
Preference number: 4 (lower is better)
Translates to: FVLPSSHVTCLRKSGRPRPMSRV*GNRDGR
Trigger: GCGGCCGTCCCGATTTCCTCAAACACGTGACATGGG...CCGCGGCCGTCCCGATTTCCTCAAACACGTGACATGGGATGAAGGGAGCACAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS-3UTR GCA 90 bp TTTGTGCTCCCTTCATCCCATGTCACGTGTTTGAGGAAATCGGGACGGCCGCGGGACATCTCCACATTCTaGCCCTCGGTCGCCGTCACG +
Preference number: 4 (lower is better)
Translates to: FVLPSSHVTCLRKSGRPRDISTF*PSVAVT
Trigger: CGTGACGGCGACCGAGGGGCAGAATGTGGAGATGTC...CCGCGGCCGTCCCGATTTCCTCAAACACGTGACATGGGATGAAGGGAGCACAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS-3UTR GCA 90 bp TTTGTGCTCCCTTCATCCCATGTCACGTGTTTGAGGAAATCGGGACGGCCGCGGGGGCTGGAGGTGGAGTaGGTTCGTTGGTTGGCAGAG +
Preference number: 4 (lower is better)
Translates to: FVLPSSHVTCLRKSGRPRGLEVE*VRWLAE
Trigger: CTCTGCCAACCAACGAACGCACTCCACCTCCAGCCC...CCGCGGCCGTCCCGATTTCCTCAAACACGTGACATGGGATGAAGGGAGCACAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS-3UTR TCA 90 bp CTACATTATAAGGCAGGGCAAACTCAGAGAACCCTAATCCAAGTGCCCTACAAAGCAAGCGGGGCGGGCTaGGGACTTCGCCGGGCTCGC +
Preference number: 4 (lower is better)
Translates to: LHYKAGQTQRTLIQVPYKASGAG*GLRRAR
Trigger: GCGAGCCCGGCGAAGTCCTCAGCCCGCCCCGCTTGC...TTTGTAGGGCACTTGGATTAGGGTTCTCTGAGTTTGCCCTGCCTTATAATGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS-3UTR GCA 90 bp TTTGTGCTCCCTTCATCCCATGTCACGTGTTTGAGGAAATCGGGACGGCCGCGGCGAAGGCCTGCATTCTaGGGGCATGGCTGTTGGCAT +
Preference number: 4 (lower is better)
Translates to: FVLPSSHVTCLRKSGRPRRRPAF*GHGCWH
Trigger: ATGCCAACAGCCATGCCCGCAGAATGCAGGCCTTCG...CCGCGGCCGTCCCGATTTCCTCAAACACGTGACATGGGATGAAGGGAGCACAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS-3UTR TCA 90 bp TTTGTGCTCCCTTCATCCCATGTCACGTGTTTGAGGAAATCGGGACGGCCGCGGATTTTGGCTACCACTTaGGGGCTGGAGGTGGAGTGC +
Preference number: 4 (lower is better)
Translates to: FVLPSSHVTCLRKSGRPRILATT*GLEVEC
Trigger: GCACTCCACCTCCAGCCCTCAAGTGGTAGCCAAAAT...CCGCGGCCGTCCCGATTTCCTCAAACACGTGACATGGGATGAAGGGAGCACAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS-3UTR CCA 90 bp TTTGTGCTCCCTTCATCCCATGTCACGTGTTTGAGGAAATCGGGACGGCCGCGGGAAGCTCCCCGTAGTTaGCATCAGTCACCCTGCACT +
Preference number: 4 (lower is better)
Translates to: FVLPSSHVTCLRKSGRPREAPRS*HQSPCT
Trigger: AGTGCAGGGTGACTGATGCCAACTACGGGGAGCTTC...CCGCGGCCGTCCCGATTTCCTCAAACACGTGACATGGGATGAAGGGAGCACAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302287.7
3UTR CAA 72 bp AGTATGTTTGTGCTCCCTTCATCCCATGTCACGTGTTaGAGGAAATCGGGACGGCCGCGGGGTTGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: SMFVLPSSHVTC*RKSGRPRGCAG
Trigger: CCCTGCACAACCCCGCGGCCGTCCCGATTTCCTCAAACACGTGACATGGGATGAAGGGAGCACAAACATACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS-3UTR GCA 90 bp AACATGAATTTAGGGAATTATGGTGAGTGCTTCACCTTCCCCACATTCGCCTCCCCCGCCGCTCCGGCTTaGGTGATCACTGCCCTCCCT +
Preference number: 4 (lower is better)
Translates to: NMNLGNYGECFTFPTFASPAAPA*VITALP
Trigger: AGGGAGGGCAGTGATCACGCAAGCCGGAGCGGCGGG...GGAGGCGAATGTGGGGAAGGTGAAGCACTCACCATAATTCCCTAAATTCATGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402613.4
ENST00000407838.7
CDS-3UTR GCA 90 bp TGCAATGACCAAGGCATGCCAGGAGAGTTGCTCATCTACATTATAAGGCAGGGCTGGCAGAGCCATGGATaGTGCTGGGGATGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: CNDQGMPGELLIYIIRQGWQSHG*CWGWLR
Trigger: CCGCAGCCATCCCCAGCAGCATCCATGGCTCTGCCA...GCCCTGCCTTATAATGTAGATGAGCAACTCTCCTGGCATGCCTTGGTCATTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS-3UTR CCA 90 bp CTCCTAGGATTGACGGAGATTGGCCATAACCAGCACTTGCCACCATTGAACAAGATCCTGCTGCTTGCTTaGCGAGGGCTGGCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: LLGLTEIGHNQHLPPLNKILLLA*RGLAVG
Trigger: CCCCACAGCCAGCCCTCGCCAAGCAAGCAGCAGGAT...CTTGTTCAATGGTGGCAAGTGCTGGTTATGGCCAATCTCCGTCAATCCTAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
3UTR CAA 72 bp TGTCACGTGTTTGAGGAAATCGGGACGGCCGCGGGGTaGTGCAGGGTACTGCTCATTCCACGAAGCCTTTAT +
Preference number: 4 (lower is better)
Translates to: CHVFEEIGTAAG*CRVLLIPRSLY
Trigger: ATAAAGGCTTCGTGGAATGAGCAGTACCCTGCACAACCCCGCGGCCGTCCCGATTTCCTCAAACACGTGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS-3UTR GCA 90 bp TGCAATGACCAAGGCATGCCAGGAGAGTTGCTCATCTACATTATAAGGCAGGGCCCCTGGGCGCGACACTaGAAACATCCTGCTGCTTGC +
Preference number: 4 (lower is better)
Translates to: CNDQGMPGELLIYIIRQGPWARH*KHPAAC
Trigger: GCAAGCAGCAGGATGTTTGCAGTGTCGCGCCCAGGG...GCCCTGCCTTATAATGTAGATGAGCAACTCTCCTGGCATGCCTTGGTCATTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS-3UTR GCA 90 bp CTCCTAGGATTGACGGAGATTGGCCATAACCAGCACTTGCCACCATTGAACAAGGACATCTCCACATTCTaGCCCTCGGTCGCCGTCACG +
Preference number: 4 (lower is better)
Translates to: LLGLTEIGHNQHLPPLNKDISTF*PSVAVT
Trigger: CGTGACGGCGACCGAGGGGCAGAATGTGGAGATGTC...CTTGTTCAATGGTGGCAAGTGCTGGTTATGGCCAATCTCCGTCAATCCTAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR GCA 90 bp CTCCTAGGATTGACGGAGATTGGCCATAACCAGCACTTGCCACCATTGAACAAGCGGGGCTTCATATCCTaGAGCCACATGGGCGAGGCT +
Preference number: 4 (lower is better)
Translates to: LLGLTEIGHNQHLPPLNKRGFIS*SHMGEA
Trigger: AGCCTCGCCCATGTGGCTGCAGGATATGAAGCCCCG...CTTGTTCAATGGTGGCAAGTGCTGGTTATGGCCAATCTCCGTCAATCCTAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CCA 90 bp ACATTAATGCCATTCAGAACAGCTTTAACTTGCACAGCTGCCTTCAGAATCCTGAGCCGGCTCGGGAAGTaGGGAGTGGGCAAGCGGGGC +
Preference number: 4 (lower is better)
Translates to: TLMPFRTALTCTAAFRILSRLGK*GVGKRG
Trigger: GCCCCGCTTGCCCACTCCCCACTTCCCGAGCCGGCT...CAGGATTCTGAAGGCAGCTGTGCAAGTTAAAGCTGTTCTGAATGGCATTAATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS-3UTR CCA 90 bp CTCCTAGGATTGACGGAGATTGGCCATAACCAGCACTTGCCACCATTGAACAAGCTGCGGAGCCCAGGCTaGAATCGCTGGGAAGTGTCT +
Preference number: 4 (lower is better)
Translates to: LLGLTEIGHNQHLPPLNKLRSPG*NRWEVS
Trigger: AGACACTTCCCAGCGATTCCAGCCTGGGCTCCGCAG...CTTGTTCAATGGTGGCAAGTGCTGGTTATGGCCAATCTCCGTCAATCCTAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CCA 90 bp CTCCTAGGATTGACGGAGATTGGCCATAACCAGCACTTGCCACCATTGAACAAGAGGCGTGCGAGTGGATaGCAGGCTCAGTCTCAGAGC +
Preference number: 4 (lower is better)
Translates to: LLGLTEIGHNQHLPPLNKRRASG*QAQSQS
Trigger: GCTCTGAGACTGAGCCTGCCATCCACTCGCACGCCT...CTTGTTCAATGGTGGCAAGTGCTGGTTATGGCCAATCTCCGTCAATCCTAGGAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CCA 90 bp TGCAATGACCAAGGCATGCCAGGAGAGTTGCTCATCTACATTATAAGGCAGGGCAGCCATGGATGCTGCTaGGGATGGCTGCGGAGACGT +
Preference number: 4 (lower is better)
Translates to: CNDQGMPGELLIYIIRQGSHGCC*GWLRRR
Trigger: ACGTCTCCGCAGCCATCCCCAGCAGCATCCATGGCT...GCCCTGCCTTATAATGTAGATGAGCAACTCTCCTGGCATGCCTTGGTCATTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS-3UTR TCA 90 bp GGGTCCTTTAGTAGGAAATTAGTGGTATCCATAGTAAATATTCCCTATCCTGATGCAAGCGGGGCGGGCTaGGGACTTCGCCGGGCTCGC +
Preference number: 4 (lower is better)
Translates to: GSFSRKLVVSIVNIPYPDASGAG*GLRRAR
Trigger: GCGAGCCCGGCGAAGTCCTCAGCCCGCCCCGCTTGC...ATCAGGATAGGGAATATTTACTATGGATACCACTAATTTCCTACTAAAGGACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407838.7
CDS-3UTR TCA 90 bp CTACATTATAAGGCAGGGCAAACTCAGAGAACCCTAATCCAAGTGCCCTACAAAGCACCACTAGGGGACTaGCGGGGTGCACCCACATGC +
Preference number: 4 (lower is better)
Translates to: LHYKAGQTQRTLIQVPYKAPLGD*RGAPTC
Trigger: GCATGTGGGTGCACCCCGTCAGTCCCCTAGTGGTGC...TTTGTAGGGCACTTGGATTAGGGTTCTCTGAGTTTGCCCTGCCTTATAATGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS-3UTR GCA 90 bp GAGATTGGCCATAACCAGCACTTGCCACCATTGAACAAGAACTGTAATCAAGAACCCGCCGCTCCGGCTTaGGTGATCACTGCCCTCCCT +
Preference number: 4 (lower is better)
Translates to: EIGHNQHLPPLNKNCNQEPAAPA*VITALP
Trigger: AGGGAGGGCAGTGATCACGCAAGCCGGAGCGGCGGG...TTCTTGATTACAGTTCTTGTTCAATGGTGGCAAGTGCTGGTTATGGCCAATCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402613.4
ENST00000407838.7
CDS-3UTR GCA 90 bp GGAATTATGGTGAGTGCTTCACCTTCCCCACATTCGCCTCCTAGGCAAATTTTCCCCTGGGCGCGACACTaGAAACATCCTGCTGCTTGC +
Preference number: 4 (lower is better)
Translates to: GIMVSASPSPHSPPRQIFPWARH*KHPAAC
Trigger: GCAAGCAGCAGGATGTTTGCAGTGTCGCGCCCAGGG...GAAAATTTGCCTAGGAGGCGAATGTGGGGAAGGTGAAGCACTCACCATAATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR GCA 90 bp TTTGTGCTCCCTTCATCCCATGTCACGTGTTTGAGGAAATCGGGACGGCCGCGGTGTGGGAGATGTCATTaGCTTGGACTTTCACTGTGC +
Preference number: 4 (lower is better)
Translates to: FVLPSSHVTCLRKSGRPRCGRCH*LGLSLC
Trigger: GCACAGTGAAAGTCCAAGGCAATGACATCTCCCACA...CCGCGGCCGTCCCGATTTCCTCAAACACGTGACATGGGATGAAGGGAGCACAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS-3UTR GCA 90 bp CTACATTATAAGGCAGGGCAAACTCAGAGAACCCTAATCCAAGTGCCCTACAAAGCTGCTGGGGATGGCTaGGGAGACGTTCTTGCGGGG +
Preference number: 4 (lower is better)
Translates to: LHYKAGQTQRTLIQVPYKAAGDG*GDVLAG
Trigger: CCCCGCAAGAACGTCTCCGCAGCCATCCCCAGCAGC...TTTGTAGGGCACTTGGATTAGGGTTCTCTGAGTTTGCCCTGCCTTATAATGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS-3UTR CCA 90 bp CTCCTAGGATTGACGGAGATTGGCCATAACCAGCACTTGCCACCATTGAACAAGTTGCTTGGCGAGGGCTaGCTGTGGGGAGAAGGGATT +
Preference number: 4 (lower is better)
Translates to: LLGLTEIGHNQHLPPLNKLLGEG*LWGEGI
Trigger: AATCCCTTCTCCCCACAGCCAGCCCTCGCCAAGCAA...CTTGTTCAATGGTGGCAAGTGCTGGTTATGGCCAATCTCCGTCAATCCTAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CCA 90 bp CTACATTATAAGGCAGGGCAAACTCAGAGAACCCTAATCCAAGTGCCCTACAAAGAGGCGGAGCCGCTCTaGAAGGCGCAGGACATCTCC +
Preference number: 4 (lower is better)
Translates to: LHYKAGQTQRTLIQVPYKEAEPL*KAQDIS
Trigger: GGAGATGTCCTGCGCCTTCCAGAGCGGCTCCGCCTC...TTTGTAGGGCACTTGGATTAGGGTTCTCTGAGTTTGCCCTGCCTTATAATGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS-3UTR CCA 90 bp GAATATGCACTTTCCAGAATGAAGCAGAGGACAATAGAGACCATCTGCAGCTGTGAGGCGGAGCCGCTCTaGAAGGCGCAGGACATCTCC +
Preference number: 4 (lower is better)
Translates to: EYALSRMKQRTIETICSCEAEPL*KAQDIS
Trigger: GGAGATGTCCTGCGCCTTCCAGAGCGGCTCCGCCTC...ACAGCTGCAGATGGTCTCTATTGTCCTCTGCTTCATTCTGGAAAGTGCATATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CCA 90 bp CTCCTAGGATTGACGGAGATTGGCCATAACCAGCACTTGCCACCATTGAACAAGTGGTTGGCAGAGCCATaGATGCTGCTGGGGATGGCT +
Preference number: 4 (lower is better)
Translates to: LLGLTEIGHNQHLPPLNKWLAEP*MLLGMA
Trigger: AGCCATCCCCAGCAGCATCCATGGCTCTGCCAACCA...CTTGTTCAATGGTGGCAAGTGCTGGTTATGGCCAATCTCCGTCAATCCTAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CCA 90 bp TTTGTGCTCCCTTCATCCCATGTCACGTGTTTGAGGAAATCGGGACGGCCGCGGTTTGTTTGGGGATTTTaGCTACCACTTGAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: FVLPSSHVTCLRKSGRPRFVWGF*LPLEGW
Trigger: CCAGCCCTCAAGTGGTAGCCAAAATCCCCAAACAAA...CCGCGGCCGTCCCGATTTCCTCAAACACGTGACATGGGATGAAGGGAGCACAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS-3UTR TCA 90 bp TTTGTGCTCCCTTCATCCCATGTCACGTGTTTGAGGAAATCGGGACGGCCGCGGCTCACTTTGGAAATCTaGAGCTTGTGGGAGATGTCA +
Preference number: 4 (lower is better)
Translates to: FVLPSSHVTCLRKSGRPRLTLEI*SLWEMS
Trigger: TGACATCTCCCACAAGCTTCAGATTTCCAAAGTGAG...CCGCGGCCGTCCCGATTTCCTCAAACACGTGACATGGGATGAAGGGAGCACAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS-3UTR TCA 90 bp CTCCTAGGATTGACGGAGATTGGCCATAACCAGCACTTGCCACCATTGAACAAGATTTTGGCTACCACTTaGGGGCTGGAGGTGGAGTGC +
Preference number: 4 (lower is better)
Translates to: LLGLTEIGHNQHLPPLNKILATT*GLEVEC
Trigger: GCACTCCACCTCCAGCCCTCAAGTGGTAGCCAAAAT...CTTGTTCAATGGTGGCAAGTGCTGGTTATGGCCAATCTCCGTCAATCCTAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR TCA 90 bp TTTGTGCTCCCTTCATCCCATGTCACGTGTTTGAGGAAATCGGGACGGCCGCGGTCTACTCTATACGACTaGCCTTTCTGTGGAGCGTTT +
Preference number: 4 (lower is better)
Translates to: FVLPSSHVTCLRKSGRPRSTLYD*PFCGAF
Trigger: AAACGCTCCACAGAAAGGTCAGTCGTATAGAGTAGA...CCGCGGCCGTCCCGATTTCCTCAAACACGTGACATGGGATGAAGGGAGCACAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS-3UTR GCA 90 bp AACATGAATTTAGGGAATTATGGTGAGTGCTTCACCTTCCCCACATTCGCCTCCGGGAAGTGTCTCGGCTaGCTGGCTGCCTGCTTTCAG +
Preference number: 4 (lower is better)
Translates to: NMNLGNYGECFTFPTFASGKCLG*LAACFQ
Trigger: CTGAAAGCAGGCAGCCAGGCAGCCGAGACACTTCCC...GGAGGCGAATGTGGGGAAGGTGAAGCACTCACCATAATTCCCTAAATTCATGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR GCA 90 bp ACTTTCCAGAATGAAGCAGAGGACAATAGAGACCATCTGCAGCTGTCAAACCTGCCCTGGGCGCGACACTaGAAACATCCTGCTGCTTGC +
Preference number: 4 (lower is better)
Translates to: TFQNEAEDNRDHLQLSNLPWARH*KHPAAC
Trigger: GCAAGCAGCAGGATGTTTGCAGTGTCGCGCCCAGGG...CAGGTTTGACAGCTGCAGATGGTCTCTATTGTCCTCTGCTTCATTCTGGAAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR GCA 90 bp GAGATTGGCCATAACCAGCACTTGCCACCATTGAACAAGAACTGTAATCAAGAAGCTGCTGGGGATGGCTaGGGAGACGTTCTTGCGGGG +
Preference number: 4 (lower is better)
Translates to: EIGHNQHLPPLNKNCNQEAAGDG*GDVLAG
Trigger: CCCCGCAAGAACGTCTCCGCAGCCATCCCCAGCAGC...TTCTTGATTACAGTTCTTGTTCAATGGTGGCAAGTGCTGGTTATGGCCAATCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR GCA 90 bp ACTTTCCAGAATGAAGCAGAGGACAATAGAGACCATCTGCAGCTGTCAAACCTGGCCAGCACGCAGCTCTaGACACCAGGGGTTGATCCA +
Preference number: 4 (lower is better)
Translates to: TFQNEAEDNRDHLQLSNLASTQL*TPGVDP
Trigger: TGGATCAACCCCTGGTGTGCAGAGCTGCGTGCTGGC...CAGGTTTGACAGCTGCAGATGGTCTCTATTGTCCTCTGCTTCATTCTGGAAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404951.5
CDS-3UTR CCA 90 bp GAAAATATGATCAACAAAGCATGTGATAGCCTCTTCATTTATGCTTCCGGAAGCAGCCGGCTCGGGAAGTaGGGAGTGGGCAAGCGGGGC +
Preference number: 4 (lower is better)
Translates to: ENMINKACDSLFIYASGSSRLGK*GVGKRG
Trigger: GCCCCGCTTGCCCACTCCCCACTTCCCGAGCCGGCT...GCTTCCGGAAGCATAAATGAAGAGGCTATCACATGCTTTGTTGATCATATTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407838.7
CDS-3UTR CCA 90 bp AACATGAATTTAGGGAATTATGGTGAGTGCTTCACCTTCCCCACATTCGCCTCCCCAGGCTGGAATCGCTaGGAAGTGTCTCGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: NMNLGNYGECFTFPTFASPGWNR*EVSRLP
Trigger: AGGCAGCCGAGACACTTCCCAGCGATTCCAGCCTGG...GGAGGCGAATGTGGGGAAGGTGAAGCACTCACCATAATTCCCTAAATTCATGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CCA 90 bp CTACATTATAAGGCAGGGCAAACTCAGAGAACCCTAATCCAAGTGCCCTACAAAATCCTGCTGCTTGCTTaGCGAGGGCTGGCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: LHYKAGQTQRTLIQVPYKILLLA*RGLAVG
Trigger: CCCCACAGCCAGCCCTCGCCAAGCAAGCAGCAGGAT...TTTGTAGGGCACTTGGATTAGGGTTCTCTGAGTTTGCCCTGCCTTATAATGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS-3UTR CCA 90 bp TGCAATGACCAAGGCATGCCAGGAGAGTTGCTCATCTACATTATAAGGCAGGGCTCAGTCTCAGAGCCCTaGGCGCGACACTGCAAACAT +
Preference number: 4 (lower is better)
Translates to: CNDQGMPGELLIYIIRQGSVSEP*ARHCKH
Trigger: ATGTTTGCAGTGTCGCGCCCAGGGCTCTGAGACTGA...GCCCTGCCTTATAATGTAGATGAGCAACTCTCCTGGCATGCCTTGGTCATTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS-3UTR CCA 90 bp ACTTTCCAGAATGAAGCAGAGGACAATAGAGACCATCTGCAGCTGTCAAACCTGAGGCGTGCGAGTGGATaGCAGGCTCAGTCTCAGAGC +
Preference number: 4 (lower is better)
Translates to: TFQNEAEDNRDHLQLSNLRRASG*QAQSQS
Trigger: GCTCTGAGACTGAGCCTGCCATCCACTCGCACGCCT...CAGGTTTGACAGCTGCAGATGGTCTCTATTGTCCTCTGCTTCATTCTGGAAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CCA 90 bp AAATGTAGTTCTATAAACCTCCTAGGATTGACGGAGATTGGCCATAACCAGCACGAGGCGGAGCCGCTCTaGAAGGCGCAGGACATCTCC +
Preference number: 4 (lower is better)
Translates to: KCSSINLLGLTEIGHNQHEAEPL*KAQDIS
Trigger: GGAGATGTCCTGCGCCTTCCAGAGCGGCTCCGCCTC...GTGCTGGTTATGGCCAATCTCCGTCAATCCTAGGAGGTTTATAGAACTACATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CCA 90 bp AACATGAATTTAGGGAATTATGGTGAGTGCTTCACCTTCCCCACATTCGCCTCCGGATGCTGCTGGGGATaGCTGCGGAGACGTTCTTGC +
Preference number: 4 (lower is better)
Translates to: NMNLGNYGECFTFPTFASGCCWG*LRRRSC
Trigger: GCAAGAACGTCTCCGCAGCCATCCCCAGCAGCATCC...GGAGGCGAATGTGGGGAAGGTGAAGCACTCACCATAATTCCCTAAATTCATGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CCA 90 bp GGAATTATGGTGAGTGCTTCACCTTCCCCACATTCGCCTCCTAGGCAAATTTTCCTTGAGGGCTGGAGGTaGAGTGCGTTCGTTGGTTGG +
Preference number: 4 (lower is better)
Translates to: GIMVSASPSPHSPPRQIFLEGWR*SAFVGW
Trigger: CCAACCAACGAACGCACTCCACCTCCAGCCCTCAAG...GAAAATTTGCCTAGGAGGCGAATGTGGGGAAGGTGAAGCACTCACCATAATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CCA 90 bp GGAATTATGGTGAGTGCTTCACCTTCCCCACATTCGCCTCCTAGGCAAATTTTCCCAGGGGTTGATCCATaGCCAGGTTGGGGAAGAGGA +
Preference number: 4 (lower is better)
Translates to: GIMVSASPSPHSPPRQIFPGVDP*PGWGRG
Trigger: TCCTCTTCCCCAACCTGGCCATGGATCAACCCCTGG...GAAAATTTGCCTAGGAGGCGAATGTGGGGAAGGTGAAGCACTCACCATAATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000404951.5
CDS-3UTR CCA 90 bp CTCCTAGGATTGACGGAGATTGGCCATAACCAGCACTTGCCACCATTGAACAAGACAGTGGGTGCAGGGTaGTGCTTGGAGTTTAGGGTC +
Preference number: 4 (lower is better)
Translates to: LLGLTEIGHNQHLPPLNKTVGAG*CLEFRV
Trigger: GACCCTAAACTCCAAGCACCACCCTGCACCCACTGT...CTTGTTCAATGGTGGCAAGTGCTGGTTATGGCCAATCTCCGTCAATCCTAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR TCA 90 bp ACATTAATGCCATTCAGAACAGCTTTAACTTGCACAGCTGCCTTCAGAATCCTGCCGCTCCGGCTTGCGTaGTCACTGCCCTCCCTAAAC +
Preference number: 4 (lower is better)
Translates to: TLMPFRTALTCTAAFRILPLRLA*SLPSLN
Trigger: GTTTAGGGAGGGCAGTGATCACGCAAGCCGGAGCGG...CAGGATTCTGAAGGCAGCTGTGCAAGTTAAAGCTGTTCTGAATGGCATTAATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS-3UTR TCA 90 bp TGCAATGACCAAGGCATGCCAGGAGAGTTGCTCATCTACATTATAAGGCAGGGCCATGGCTGTTGGCATTaGCTTTCAGATAGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: CNDQGMPGELLIYIIRQGHGCWH*LSDRPG
Trigger: CCCAGGCCTATCTGAAAGTCAATGCCAACAGCCATG...GCCCTGCCTTATAATGTAGATGAGCAACTCTCCTGGCATGCCTTGGTCATTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS-3UTR TCA 90 bp TTTGTGCTCCCTTCATCCCATGTCACGTGTTTGAGGAAATCGGGACGGCCGCGGCAGGACGATATGAGATaGGATCTCAGAAATCATCCT +
Preference number: 4 (lower is better)
Translates to: FVLPSSHVTCLRKSGRPRQDDMR*DLRNHP
Trigger: AGGATGATTTCTGAGATCTCATCTCATATCGTCCTG...CCGCGGCCGTCCCGATTTCCTCAAACACGTGACATGGGATGAAGGGAGCACAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS-3UTR GCA 90 bp CTACATTATAAGGCAGGGCAAACTCAGAGAACCCTAATCCAAGTGCCCTACAAAGAGGCTTCGAAGGCCTaGATTCTGCGGGCATGGCTG +
Preference number: 4 (lower is better)
Translates to: LHYKAGQTQRTLIQVPYKEASKA*ILRAWL
Trigger: CAGCCATGCCCGCAGAATGCAGGCCTTCGAAGCCTC...TTTGTAGGGCACTTGGATTAGGGTTCTCTGAGTTTGCCCTGCCTTATAATGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS-3UTR GCA 90 bp CACACATTGGGCTTCAGAGAGGCTAAGCCATCTGTTCATCAGACTGACATAAATCGGGGCTTCATATCCTaGAGCCACATGGGCGAGGCT +
Preference number: 4 (lower is better)
Translates to: HTLGFREAKPSVHQTDINRGFIS*SHMGEA
Trigger: AGCCTCGCCCATGTGGCTGCAGGATATGAAGCCCCG...ATTTATGTCAGTCTGATGAACAGATGGCTTAGCCTCTCTGAAGCCCAATGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS-3UTR GCA 90 bp GAGATTGGCCATAACCAGCACTTGCCACCATTGAACAAGAACTGTAATCAAGAATGGCAGAGCCATGGATaGTGCTGGGGATGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: EIGHNQHLPPLNKNCNQEWQSHG*CWGWLR
Trigger: CCGCAGCCATCCCCAGCAGCATCCATGGCTCTGCCA...TTCTTGATTACAGTTCTTGTTCAATGGTGGCAAGTGCTGGTTATGGCCAATCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR GCA 90 bp GGAATTATGGTGAGTGCTTCACCTTCCCCACATTCGCCTCCTAGGCAAATTTTCAGGCGATTTGCTCTTTaGTGGAGGAGCCAGCACGCA +
Preference number: 4 (lower is better)
Translates to: GIMVSASPSPHSPPRQIFRRFAL*WRSQHA
Trigger: TGCGTGCTGGCTCCTCCAGCAAAGAGCAAATCGCCT...GAAAATTTGCCTAGGAGGCGAATGTGGGGAAGGTGAAGCACTCACCATAATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404951.5
CDS-3UTR CCA 90 bp CTACATTATAAGGCAGGGCAAACTCAGAGAACCCTAATCCAAGTGCCCTACAAACCAGGCTGGAATCGCTaGGAAGTGTCTCGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: LHYKAGQTQRTLIQVPYKPGWNR*EVSRLP
Trigger: AGGCAGCCGAGACACTTCCCAGCGATTCCAGCCTGG...TTTGTAGGGCACTTGGATTAGGGTTCTCTGAGTTTGCCCTGCCTTATAATGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS-3UTR CCA 90 bp CACACATTGGGCTTCAGAGAGGCTAAGCCATCTGTTCATCAGACTGACATAAATCTGCGGAGCCCAGGCTaGAATCGCTGGGAAGTGTCT +
Preference number: 4 (lower is better)
Translates to: HTLGFREAKPSVHQTDINLRSPG*NRWEVS
Trigger: AGACACTTCCCAGCGATTCCAGCCTGGGCTCCGCAG...ATTTATGTCAGTCTGATGAACAGATGGCTTAGCCTCTCTGAAGCCCAATGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS-3UTR CCA 90 bp TGCAATGACCAAGGCATGCCAGGAGAGTTGCTCATCTACATTATAAGGCAGGGCTTAGAACCAGCTGGCTaGGATTCAGCGAGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: CNDQGMPGELLIYIIRQGLEPAG*DSARLP
Trigger: AGGAAGCCTCGCTGAATCCCAGCCAGCTGGTTCTAA...GCCCTGCCTTATAATGTAGATGAGCAACTCTCCTGGCATGCCTTGGTCATTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS-3UTR CCA 90 bp AACATGAATTTAGGGAATTATGGTGAGTGCTTCACCTTCCCCACATTCGCCTCCTTGCTTGGCGAGGGCTaGCTGTGGGGAGAAGGGATT +
Preference number: 4 (lower is better)
Translates to: NMNLGNYGECFTFPTFASLLGEG*LWGEGI
Trigger: AATCCCTTCTCCCCACAGCCAGCCCTCGCCAAGCAA...GGAGGCGAATGTGGGGAAGGTGAAGCACTCACCATAATTCCCTAAATTCATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CCA 90 bp CACACATTGGGCTTCAGAGAGGCTAAGCCATCTGTTCATCAGACTGACATAAATAGGCGTGCGAGTGGATaGCAGGCTCAGTCTCAGAGC +
Preference number: 4 (lower is better)
Translates to: HTLGFREAKPSVHQTDINRRASG*QAQSQS
Trigger: GCTCTGAGACTGAGCCTGCCATCCACTCGCACGCCT...ATTTATGTCAGTCTGATGAACAGATGGCTTAGCCTCTCTGAAGCCCAATGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS-3UTR CCA 90 bp GGAATTATGGTGAGTGCTTCACCTTCCCCACATTCGCCTCCTAGGCAAATTTTCAGAAAGGCGTGCGAGTaGATGGCAGGCTCAGTCTCA +
Preference number: 4 (lower is better)
Translates to: GIMVSASPSPHSPPRQIFRKACE*MAGSVS
Trigger: TGAGACTGAGCCTGCCATCCACTCGCACGCCTTTCT...GAAAATTTGCCTAGGAGGCGAATGTGGGGAAGGTGAAGCACTCACCATAATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CCA 90 bp CTACATTATAAGGCAGGGCAAACTCAGAGAACCCTAATCCAAGTGCCCTACAAAGGATGCTGCTGGGGATaGCTGCGGAGACGTTCTTGC +
Preference number: 4 (lower is better)
Translates to: LHYKAGQTQRTLIQVPYKGCCWG*LRRRSC
Trigger: GCAAGAACGTCTCCGCAGCCATCCCCAGCAGCATCC...TTTGTAGGGCACTTGGATTAGGGTTCTCTGAGTTTGCCCTGCCTTATAATGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS-3UTR CCA 90 bp AACATGAATTTAGGGAATTATGGTGAGTGCTTCACCTTCCCCACATTCGCCTCCCTTGAGGGCTGGAGGTaGAGTGCGTTCGTTGGTTGG +
Preference number: 4 (lower is better)
Translates to: NMNLGNYGECFTFPTFASLEGWR*SAFVGW
Trigger: CCAACCAACGAACGCACTCCACCTCCAGCCCTCAAG...GGAGGCGAATGTGGGGAAGGTGAAGCACTCACCATAATTCCCTAAATTCATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
3UTR CAA 72 bp AGCCTCTTCATTTATGCTTCCGGAAGCAGGCGCTCCTaGTGTAGTGAATTAGAGTACAGTGGGTGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: SLFIYASGSRRS*CSELEYSGCRV
Trigger: CACCCTGCACCCACTGTACTCTAATTCACTACACAAGGAGCGCCTGCTTCCGGAAGCATAAATGAAGAGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407838.7
CDS-3UTR TCA 90 bp GGAATTATGGTGAGTGCTTCACCTTCCCCACATTCGCCTCCTAGGCAAATTTTCCATGGCTGTTGGCATTaGCTTTCAGATAGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: GIMVSASPSPHSPPRQIFHGCWH*LSDRPG
Trigger: CCCAGGCCTATCTGAAAGTCAATGCCAACAGCCATG...GAAAATTTGCCTAGGAGGCGAATGTGGGGAAGGTGAAGCACTCACCATAATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR TCA 90 bp TTTGTGCTCCCTTCATCCCATGTCACGTGTTTGAGGAAATCGGGACGGCCGCGGCATAATCACTTGCACTaGACTAGGTCTCCGATTTTA +
Preference number: 4 (lower is better)
Translates to: FVLPSSHVTCLRKSGRPRHNHLH*TRSPIL
Trigger: TAAAATCGGAGACCTAGTTCAGTGCAAGTGATTATG...CCGCGGCCGTCCCGATTTCCTCAAACACGTGACATGGGATGAAGGGAGCACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS-3UTR TCA 90 bp TGCAATGACCAAGGCATGCCAGGAGAGTTGCTCATCTACATTATAAGGCAGGGCTGCACCCACATGCTTTaGGCTCTGAGTGAATTGGTG +
Preference number: 4 (lower is better)
Translates to: CNDQGMPGELLIYIIRQGCTHML*ALSELV
Trigger: CACCAATTCACTCAGAGCTCAAAGCATGTGGGTGCA...GCCCTGCCTTATAATGTAGATGAGCAACTCTCCTGGCATGCCTTGGTCATTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS-3UTR GCA 90 bp ACATTAATGCCATTCAGAACAGCTTTAACTTGCACAGCTGCCTTCAGAATCCTGGGGAAGTGTCTCGGCTaGCTGGCTGCCTGCTTTCAG +
Preference number: 4 (lower is better)
Translates to: TLMPFRTALTCTAAFRILGKCLG*LAACFQ
Trigger: CTGAAAGCAGGCAGCCAGGCAGCCGAGACACTTCCC...CAGGATTCTGAAGGCAGCTGTGCAAGTTAAAGCTGTTCTGAATGGCATTAATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS-3UTR GCA 90 bp ACTTTCCAGAATGAAGCAGAGGACAATAGAGACCATCTGCAGCTGTCAAACCTGAAACATCCTGCTGCTTaGTTGGCGAGGGCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: TFQNEAEDNRDHLQLSNLKHPAA*LARAGC
Trigger: ACAGCCAGCCCTCGCCAAGCAAGCAGCAGGATGTTT...CAGGTTTGACAGCTGCAGATGGTCTCTATTGTCCTCTGCTTCATTCTGGAAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR GCA 90 bp ACTTTCCAGAATGAAGCAGAGGACAATAGAGACCATCTGCAGCTGTCAAACCTGACACTGCAAACATCCTaGTGCTTGCTTGGCGAGGGC +
Preference number: 4 (lower is better)
Translates to: TFQNEAEDNRDHLQLSNLTLQTS*CLLGEG
Trigger: GCCCTCGCCAAGCAAGCAGCAGGATGTTTGCAGTGT...CAGGTTTGACAGCTGCAGATGGTCTCTATTGTCCTCTGCTTCATTCTGGAAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR GCA 90 bp AACATGAATTTAGGGAATTATGGTGAGTGCTTCACCTTCCCCACATTCGCCTCCACACTGCAAACATCCTaGTGCTTGCTTGGCGAGGGC +
Preference number: 4 (lower is better)
Translates to: NMNLGNYGECFTFPTFASTLQTS*CLLGEG
Trigger: GCCCTCGCCAAGCAAGCAGCAGGATGTTTGCAGTGT...GGAGGCGAATGTGGGGAAGGTGAAGCACTCACCATAATTCCCTAAATTCATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR GCA 90 bp ACTTTCCAGAATGAAGCAGAGGACAATAGAGACCATCTGCAGCTGTCAAACCTGCCTGAAAGAAAGGCGTaGGAGTGGATGGCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: TFQNEAEDNRDHLQLSNLPERKA*EWMAGS
Trigger: TGAGCCTGCCATCCACTCGCACGCCTTTCTTTCAGG...CAGGTTTGACAGCTGCAGATGGTCTCTATTGTCCTCTGCTTCATTCTGGAAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR GCA 90 bp GAGATTGGCCATAACCAGCACTTGCCACCATTGAACAAGAACTGTAATCAAGAAGAGGCTTCGAAGGCCTaGATTCTGCGGGCATGGCTG +
Preference number: 4 (lower is better)
Translates to: EIGHNQHLPPLNKNCNQEEASKA*ILRAWL
Trigger: CAGCCATGCCCGCAGAATGCAGGCCTTCGAAGCCTC...TTCTTGATTACAGTTCTTGTTCAATGGTGGCAAGTGCTGGTTATGGCCAATCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR GCA 90 bp AAATGTAGTTCTATAAACCTCCTAGGATTGACGGAGATTGGCCATAACCAGCACCGGGGCTTCATATCCTaGAGCCACATGGGCGAGGCT +
Preference number: 4 (lower is better)
Translates to: KCSSINLLGLTEIGHNQHRGFIS*SHMGEA
Trigger: AGCCTCGCCCATGTGGCTGCAGGATATGAAGCCCCG...GTGCTGGTTATGGCCAATCTCCGTCAATCCTAGGAGGTTTATAGAACTACATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR GCA 90 bp GAAAATATGATCAACAAAGCATGTGATAGCCTCTTCATTTATGCTTCCGGAAGCGCTGCTGGGGATGGCTaGGGAGACGTTCTTGCGGGG +
Preference number: 4 (lower is better)
Translates to: ENMINKACDSLFIYASGSAAGDG*GDVLAG
Trigger: CCCCGCAAGAACGTCTCCGCAGCCATCCCCAGCAGC...GCTTCCGGAAGCATAAATGAAGAGGCTATCACATGCTTTGTTGATCATATTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR GCA 90 bp CAGTGTACATTCTTCACAGTCAAGAGACTCTCAAACCTCAATAAACACCATGTAGCTGCTGGGGATGGCTaGGGAGACGTTCTTGCGGGG +
Preference number: 4 (lower is better)
Translates to: QCTFFTVKRLSNLNKHHVAAGDG*GDVLAG
Trigger: CCCCGCAAGAACGTCTCCGCAGCCATCCCCAGCAGC...TACATGGTGTTTATTGAGGTTTGAGAGTCTCTTGACTGTGAAGAATGTACACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR GCA 90 bp ACATTAATGCCATTCAGAACAGCTTTAACTTGCACAGCTGCCTTCAGAATCCTGACGGCCGCGGGGTTGTaGAGGGTACTGCTCATTCCA +
Preference number: 4 (lower is better)
Translates to: TLMPFRTALTCTAAFRILTAAGL*RVLLIP
Trigger: TGGAATGAGCAGTACCCTGCACAACCCCGCGGCCGT...CAGGATTCTGAAGGCAGCTGTGCAAGTTAAAGCTGTTCTGAATGGCATTAATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS-3UTR GCA 90 bp TGCAATGACCAAGGCATGCCAGGAGAGTTGCTCATCTACATTATAAGGCAGGGCGCAATGACCAAGGCATaGCAGGAGAGTTGCTCATCT +
Preference number: 4 (lower is better)
Translates to: CNDQGMPGELLIYIIRQGAMTKA*QESCSS
Trigger: AGATGAGCAACTCTCCTGGCATGCCTTGGTCATTGC...GCCCTGCCTTATAATGTAGATGAGCAACTCTCCTGGCATGCCTTGGTCATTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS-3UTR GCA 90 bp ACTTTCCAGAATGAAGCAGAGGACAATAGAGACCATCTGCAGCTGTCAAACCTGGTGGGTGCAGGGTGGTaGTTGGAGTTTAGGGTCAAC +
Preference number: 4 (lower is better)
Translates to: TFQNEAEDNRDHLQLSNLVGAGW*LEFRVN
Trigger: GTTGACCCTAAACTCCAAGCACCACCCTGCACCCAC...CAGGTTTGACAGCTGCAGATGGTCTCTATTGTCCTCTGCTTCATTCTGGAAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CCA 90 bp AACATGAATTTAGGGAATTATGGTGAGTGCTTCACCTTCCCCACATTCGCCTCCTCAGTCTCAGAGCCCTaGGCGCGACACTGCAAACAT +
Preference number: 4 (lower is better)
Translates to: NMNLGNYGECFTFPTFASSVSEP*ARHCKH
Trigger: ATGTTTGCAGTGTCGCGCCCAGGGCTCTGAGACTGA...GGAGGCGAATGTGGGGAAGGTGAAGCACTCACCATAATTCCCTAAATTCATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CCA 90 bp TGCAATGACCAAGGCATGCCAGGAGAGTTGCTCATCTACATTATAAGGCAGGGCTGCATTCTGCGGGCATaGCTGTTGGCATTGACTTTC +
Preference number: 4 (lower is better)
Translates to: CNDQGMPGELLIYIIRQGCILRA*LLALTF
Trigger: GAAAGTCAATGCCAACAGCCATGCCCGCAGAATGCA...GCCCTGCCTTATAATGTAGATGAGCAACTCTCCTGGCATGCCTTGGTCATTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS-3UTR CCA 90 bp GAGATTGGCCATAACCAGCACTTGCCACCATTGAACAAGAACTGTAATCAAGAAGGATGCTGCTGGGGATaGCTGCGGAGACGTTCTTGC +
Preference number: 4 (lower is better)
Translates to: EIGHNQHLPPLNKNCNQEGCCWG*LRRRSC
Trigger: GCAAGAACGTCTCCGCAGCCATCCCCAGCAGCATCC...TTCTTGATTACAGTTCTTGTTCAATGGTGGCAAGTGCTGGTTATGGCCAATCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CCA 90 bp AAATGTAGTTCTATAAACCTCCTAGGATTGACGGAGATTGGCCATAACCAGCACGGATGCTGCTGGGGATaGCTGCGGAGACGTTCTTGC +
Preference number: 4 (lower is better)
Translates to: KCSSINLLGLTEIGHNQHGCCWG*LRRRSC
Trigger: GCAAGAACGTCTCCGCAGCCATCCCCAGCAGCATCC...GTGCTGGTTATGGCCAATCTCCGTCAATCCTAGGAGGTTTATAGAACTACATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CCA 90 bp CTACATTATAAGGCAGGGCAAACTCAGAGAACCCTAATCCAAGTGCCCTACAAATGGTTGGCAGAGCCATaGATGCTGCTGGGGATGGCT +
Preference number: 4 (lower is better)
Translates to: LHYKAGQTQRTLIQVPYKWLAEP*MLLGMA
Trigger: AGCCATCCCCAGCAGCATCCATGGCTCTGCCAACCA...TTTGTAGGGCACTTGGATTAGGGTTCTCTGAGTTTGCCCTGCCTTATAATGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS-3UTR CCA 90 bp ACTTTCCAGAATGAAGCAGAGGACAATAGAGACCATCTGCAGCTGTCAAACCTGGTGGAGTGCGTTCGTTaGTTGGCAGAGCCATGGATG +
Preference number: 4 (lower is better)
Translates to: TFQNEAEDNRDHLQLSNLVECVR*LAEPWM
Trigger: CATCCATGGCTCTGCCAACCAACGAACGCACTCCAC...CAGGTTTGACAGCTGCAGATGGTCTCTATTGTCCTCTGCTTCATTCTGGAAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CCA 90 bp GAATATGCACTTTCCAGAATGAAGCAGAGGACAATAGAGACCATCTGCAGCTGTCTTGAGGGCTGGAGGTaGAGTGCGTTCGTTGGTTGG +
Preference number: 4 (lower is better)
Translates to: EYALSRMKQRTIETICSCLEGWR*SAFVGW
Trigger: CCAACCAACGAACGCACTCCACCTCCAGCCCTCAAG...ACAGCTGCAGATGGTCTCTATTGTCCTCTGCTTCATTCTGGAAAGTGCATATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CCA 90 bp ACTTTCCAGAATGAAGCAGAGGACAATAGAGACCATCTGCAGCTGTCAAACCTGCTACCACTTGAGGGCTaGAGGTGGAGTGCGTTCGTT +
Preference number: 4 (lower is better)
Translates to: TFQNEAEDNRDHLQLSNLLPLEG*RWSAFV
Trigger: AACGAACGCACTCCACCTCCAGCCCTCAAGTGGTAG...CAGGTTTGACAGCTGCAGATGGTCTCTATTGTCCTCTGCTTCATTCTGGAAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CCA 90 bp TTTGTGCTCCCTTCATCCCATGTCACGTGTTTGAGGAAATCGGGACGGCCGCGGACTAAGCTTCTAAATTaGCCTGGAAGGCAAATTCAC +
Preference number: 4 (lower is better)
Translates to: FVLPSSHVTCLRKSGRPRTKLLN*PGRQIH
Trigger: GTGAATTTGCCTTCCAGGCCAATTTAGAAGCTTAGT...CCGCGGCCGTCCCGATTTCCTCAAACACGTGACATGGGATGAAGGGAGCACAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS-3UTR CCA 90 bp AACATGAATTTAGGGAATTATGGTGAGTGCTTCACCTTCCCCACATTCGCCTCCACAGTGGGTGCAGGGTaGTGCTTGGAGTTTAGGGTC +
Preference number: 4 (lower is better)
Translates to: NMNLGNYGECFTFPTFASTVGAG*CLEFRV
Trigger: GACCCTAAACTCCAAGCACCACCCTGCACCCACTGT...GGAGGCGAATGTGGGGAAGGTGAAGCACTCACCATAATTCCCTAAATTCATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR TCA 90 bp CACACATTGGGCTTCAGAGAGGCTAAGCCATCTGTTCATCAGACTGACATAAATACAGCCGAAAAGCCCTaGAAGAAAGGCGTGCGAGTG +
Preference number: 4 (lower is better)
Translates to: HTLGFREAKPSVHQTDINTAEKP*KKGVRV
Trigger: CACTCGCACGCCTTTCTTTCAGGGCTTTTCGGCTGT...ATTTATGTCAGTCTGATGAACAGATGGCTTAGCCTCTCTGAAGCCCAATGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS-3UTR TCA 90 bp GAATATGCACTTTCCAGAATGAAGCAGAGGACAATAGAGACCATCTGCAGCTGTATTTTGGCTACCACTTaGGGGCTGGAGGTGGAGTGC +
Preference number: 4 (lower is better)
Translates to: EYALSRMKQRTIETICSCILATT*GLEVEC
Trigger: GCACTCCACCTCCAGCCCTCAAGTGGTAGCCAAAAT...ACAGCTGCAGATGGTCTCTATTGTCCTCTGCTTCATTCTGGAAAGTGCATATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR TCA 90 bp CACACATTGGGCTTCAGAGAGGCTAAGCCATCTGTTCATCAGACTGACATAAATCAGATGCCCTGGAAATaGAGCACCACTAGGGGACTG +
Preference number: 4 (lower is better)
Translates to: HTLGFREAKPSVHQTDINQMPWK*STTRGL
Trigger: CAGTCCCCTAGTGGTGCTTCATTTCCAGGGCATCTG...ATTTATGTCAGTCTGATGAACAGATGGCTTAGCCTCTCTGAAGCCCAATGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS-3UTR GCA 90 bp CACACATTGGGCTTCAGAGAGGCTAAGCCATCTGTTCATCAGACTGACATAAATAAACATCCTGCTGCTTaGTTGGCGAGGGCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: HTLGFREAKPSVHQTDINKHPAA*LARAGC
Trigger: ACAGCCAGCCCTCGCCAAGCAAGCAGCAGGATGTTT...ATTTATGTCAGTCTGATGAACAGATGGCTTAGCCTCTCTGAAGCCCAATGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS-3UTR GCA 90 bp ACATTAATGCCATTCAGAACAGCTTTAACTTGCACAGCTGCCTTCAGAATCCTGCTGCAAACATCCTGCTaGTTGCTTGGCGAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: TLMPFRTALTCTAAFRILLQTSC*LLGEGW
Trigger: CCAGCCCTCGCCAAGCAAGCAGCAGGATGTTTGCAG...CAGGATTCTGAAGGCAGCTGTGCAAGTTAAAGCTGTTCTGAATGGCATTAATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS-3UTR GCA 90 bp CTACATTATAAGGCAGGGCAAACTCAGAGAACCCTAATCCAAGTGCCCTACAAACCTGAAAGAAAGGCGTaGGAGTGGATGGCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: LHYKAGQTQRTLIQVPYKPERKA*EWMAGS
Trigger: TGAGCCTGCCATCCACTCGCACGCCTTTCTTTCAGG...TTTGTAGGGCACTTGGATTAGGGTTCTCTGAGTTTGCCCTGCCTTATAATGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS-3UTR GCA 90 bp AAATGTAGTTCTATAAACCTCCTAGGATTGACGGAGATTGGCCATAACCAGCACCGAAGGCCTGCATTCTaGGGGCATGGCTGTTGGCAT +
Preference number: 4 (lower is better)
Translates to: KCSSINLLGLTEIGHNQHRRPAF*GHGCWH
Trigger: ATGCCAACAGCCATGCCCGCAGAATGCAGGCCTTCG...GTGCTGGTTATGGCCAATCTCCGTCAATCCTAGGAGGTTTATAGAACTACATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR GCA 90 bp GAGATTGGCCATAACCAGCACTTGCCACCATTGAACAAGAACTGTAATCAAGAACGAAGGCCTGCATTCTaGGGGCATGGCTGTTGGCAT +
Preference number: 4 (lower is better)
Translates to: EIGHNQHLPPLNKNCNQERRPAF*GHGCWH
Trigger: ATGCCAACAGCCATGCCCGCAGAATGCAGGCCTTCG...TTCTTGATTACAGTTCTTGTTCAATGGTGGCAAGTGCTGGTTATGGCCAATCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR GCA 90 bp CACACATTGGGCTTCAGAGAGGCTAAGCCATCTGTTCATCAGACTGACATAAATCTGCGGAGACGTTCTTaGGGGGCTTCATATCCTGCA +
Preference number: 4 (lower is better)
Translates to: HTLGFREAKPSVHQTDINLRRRS*GASYPA
Trigger: TGCAGGATATGAAGCCCCGCAAGAACGTCTCCGCAG...ATTTATGTCAGTCTGATGAACAGATGGCTTAGCCTCTCTGAAGCCCAATGTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS-3UTR GCA 90 bp GAATATGCACTTTCCAGAATGAAGCAGAGGACAATAGAGACCATCTGCAGCTGTCTGCGGAGACGTTCTTaGGGGGCTTCATATCCTGCA +
Preference number: 4 (lower is better)
Translates to: EYALSRMKQRTIETICSCLRRRS*GASYPA
Trigger: TGCAGGATATGAAGCCCCGCAAGAACGTCTCCGCAG...ACAGCTGCAGATGGTCTCTATTGTCCTCTGCTTCATTCTGGAAAGTGCATATTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR GCA 90 bp CAGTGTACATTCTTCACAGTCAAGAGACTCTCAAACCTCAATAAACACCATGTATGGCAGAGCCATGGATaGTGCTGGGGATGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: QCTFFTVKRLSNLNKHHVWQSHG*CWGWLR
Trigger: CCGCAGCCATCCCCAGCAGCATCCATGGCTCTGCCA...TACATGGTGTTTATTGAGGTTTGAGAGTCTCTTGACTGTGAAGAATGTACACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CCA 90 bp CACACATTGGGCTTCAGAGAGGCTAAGCCATCTGTTCATCAGACTGACATAAATCTGCTTTCAGCTACCTaGCAGCTCGTCCAACGTCAG +
Preference number: 4 (lower is better)
Translates to: HTLGFREAKPSVHQTDINLLSAT*QLVQRQ
Trigger: CTGACGTTGGACGAGCTGCCAGGTAGCTGAAAGCAG...ATTTATGTCAGTCTGATGAACAGATGGCTTAGCCTCTCTGAAGCCCAATGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS-3UTR CCA 90 bp AACATGAATTTAGGGAATTATGGTGAGTGCTTCACCTTCCCCACATTCGCCTCCAAGGTTAGAACCAGCTaGCTGGGATTCAGCGAGGCT +
Preference number: 4 (lower is better)
Translates to: NMNLGNYGECFTFPTFASKVRTS*LGFSEA
Trigger: AGCCTCGCTGAATCCCAGCCAGCTGGTTCTAACCTT...GGAGGCGAATGTGGGGAAGGTGAAGCACTCACCATAATTCCCTAAATTCATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CCA 90 bp TGCAATGACCAAGGCATGCCAGGAGAGTTGCTCATCTACATTATAAGGCAGGGCAAGGGATTGCGATTCTaGAAGGTTAGAACCAGCTGG +
Preference number: 4 (lower is better)
Translates to: CNDQGMPGELLIYIIRQGKGLRF*KVRTSW
Trigger: CCAGCTGGTTCTAACCTTCCAGAATCGCAATCCCTT...GCCCTGCCTTATAATGTAGATGAGCAACTCTCCTGGCATGCCTTGGTCATTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS-3UTR CCA 90 bp ACATTAATGCCATTCAGAACAGCTTTAACTTGCACAGCTGCCTTCAGAATCCTGTTGCTTGGCGAGGGCTaGCTGTGGGGAGAAGGGATT +
Preference number: 4 (lower is better)
Translates to: TLMPFRTALTCTAAFRILLLGEG*LWGEGI
Trigger: AATCCCTTCTCCCCACAGCCAGCCCTCGCCAAGCAA...CAGGATTCTGAAGGCAGCTGTGCAAGTTAAAGCTGTTCTGAATGGCATTAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS-3UTR CCA 90 bp AAATGTTCTAACATGAATTTAGGGAATTATGGTGAGTGCTTCACCTTCCCCACAATCCTGCTGCTTGCTTaGCGAGGGCTGGCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: KCSNMNLGNYGECFTFPTILLLA*RGLAVG
Trigger: CCCCACAGCCAGCCCTCGCCAAGCAAGCAGCAGGAT...TGTGGGGAAGGTGAAGCACTCACCATAATTCCCTAAATTCATGTTAGAACATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CCA 90 bp AAATTAGTGGTATCCATAGTAAATATTCCCTATCCTGATGACATTCAGGCCAACGAGGCGGAGCCGCTCTaGAAGGCGCAGGACATCTCC +
Preference number: 4 (lower is better)
Translates to: KLVVSIVNIPYPDDIQANEAEPL*KAQDIS
Trigger: GGAGATGTCCTGCGCCTTCCAGAGCGGCTCCGCCTC...GTTGGCCTGAATGTCATCAGGATAGGGAATATTTACTATGGATACCACTAATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CCA 90 bp AACATGAATTTAGGGAATTATGGTGAGTGCTTCACCTTCCCCACATTCGCCTCCCGCAGGAACCACCATTaGATCTCCAGATACACCGAG +
Preference number: 4 (lower is better)
Translates to: NMNLGNYGECFTFPTFASRRNHH*ISRYTE
Trigger: CTCGGTGTATCTGGAGATCCAATGGTGGTTCCTGCG...GGAGGCGAATGTGGGGAAGGTGAAGCACTCACCATAATTCCCTAAATTCATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CCA 90 bp CACACATTGGGCTTCAGAGAGGCTAAGCCATCTGTTCATCAGACTGACATAAATAGTGCGTTCGTTGGTTaGCAGAGCCATGGATGCTGC +
Preference number: 4 (lower is better)
Translates to: HTLGFREAKPSVHQTDINSAFVG*QSHGCC
Trigger: GCAGCATCCATGGCTCTGCCAACCAACGAACGCACT...ATTTATGTCAGTCTGATGAACAGATGGCTTAGCCTCTCTGAAGCCCAATGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS-3UTR CCA 90 bp CTACATTATAAGGCAGGGCAAACTCAGAGAACCCTAATCCAAGTGCCCTACAAAGTGGAGTGCGTTCGTTaGTTGGCAGAGCCATGGATG +
Preference number: 4 (lower is better)
Translates to: LHYKAGQTQRTLIQVPYKVECVR*LAEPWM
Trigger: CATCCATGGCTCTGCCAACCAACGAACGCACTCCAC...TTTGTAGGGCACTTGGATTAGGGTTCTCTGAGTTTGCCCTGCCTTATAATGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS-3UTR CCA 90 bp TGCAATGACCAAGGCATGCCAGGAGAGTTGCTCATCTACATTATAAGGCAGGGCCAAATCCACACACATTaGGCTTCAGAGAGGCTAAGC +
Preference number: 4 (lower is better)
Translates to: CNDQGMPGELLIYIIRQGQIHTH*ASERLS
Trigger: GCTTAGCCTCTCTGAAGCCCAATGTGTGTGGATTTG...GCCCTGCCTTATAATGTAGATGAGCAACTCTCCTGGCATGCCTTGGTCATTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS-3UTR TCA 90 bp TACAATTTTGAATATGCACTTTCCAGAATGAAGCAGAGGACAATAGAGACCATCCCGCTCCGGCTTGCGTaGTCACTGCCCTCCCTAAAC +
Preference number: 4 (lower is better)
Translates to: YNFEYALSRMKQRTIETIPLRLA*SLPSLN
Trigger: GTTTAGGGAGGGCAGTGATCACGCAAGCCGGAGCGG...GATGGTCTCTATTGTCCTCTGCTTCATTCTGGAAAGTGCATATTCAAAATTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402613.4
ENST00000407838.7
CDS-3UTR TCA 90 bp CTCCTAGGATTGACGGAGATTGGCCATAACCAGCACTTGCCACCATTGAACAAGCTCACTTTGGAAATCTaGAGCTTGTGGGAGATGTCA +
Preference number: 4 (lower is better)
Translates to: LLGLTEIGHNQHLPPLNKLTLEI*SLWEMS
Trigger: TGACATCTCCCACAAGCTTCAGATTTCCAAAGTGAG...CTTGTTCAATGGTGGCAAGTGCTGGTTATGGCCAATCTCCGTCAATCCTAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR TCA 90 bp GAATATGCACTTTCCAGAATGAAGCAGAGGACAATAGAGACCATCTGCAGCTGTCATGGCTGTTGGCATTaGCTTTCAGATAGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: EYALSRMKQRTIETICSCHGCWH*LSDRPG
Trigger: CCCAGGCCTATCTGAAAGTCAATGCCAACAGCCATG...ACAGCTGCAGATGGTCTCTATTGTCCTCTGCTTCATTCTGGAAAGTGCATATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR TCA 90 bp TGCAATGACCAAGGCATGCCAGGAGAGTTGCTCATCTACATTATAAGGCAGGGCATGGGTTTCCATACCTaGTTGTGGACTTTGTTTGGG +
Preference number: 4 (lower is better)
Translates to: CNDQGMPGELLIYIIRQGMGFHT*LWTLFG
Trigger: CCCAAACAAAGTCCACAATCAGGTATGGAAACCCAT...GCCCTGCCTTATAATGTAGATGAGCAACTCTCCTGGCATGCCTTGGTCATTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS-3UTR TCA 90 bp TGCAATGACCAAGGCATGCCAGGAGAGTTGCTCATCTACATTATAAGGCAGGGCATCATCACAGGCAGCTaGGGTTTCTCCTTCAAAATC +
Preference number: 4 (lower is better)
Translates to: CNDQGMPGELLIYIIRQGIITGS*GFSFKI
Trigger: GATTTTGAAGGAGAAACCTCAGCTGCCTGTGATGAT...GCCCTGCCTTATAATGTAGATGAGCAACTCTCCTGGCATGCCTTGGTCATTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS-3UTR TCA 90 bp CTCCTAGGATTGACGGAGATTGGCCATAACCAGCACTTGCCACCATTGAACAAGAAAAATCAGCTTGCATaGGGGTCGCAGTACATCTAC +
Preference number: 4 (lower is better)
Translates to: LLGLTEIGHNQHLPPLNKKNQLA*GSQYIY
Trigger: GTAGATGTACTGCGACCCTCATGCAAGCTGATTTTT...CTTGTTCAATGGTGGCAAGTGCTGGTTATGGCCAATCTCCGTCAATCCTAGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR GCA 90 bp TACAATTTTGAATATGCACTTTCCAGAATGAAGCAGAGGACAATAGAGACCATCGGCTGCCTGGCTGCCTaGTTTCAGCTACCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: YNFEYALSRMKQRTIETIGCLAA*FQLPGS
Trigger: GCTGCCAGGTAGCTGAAAGCAGGCAGCCAGGCAGCC...GATGGTCTCTATTGTCCTCTGCTTCATTCTGGAAAGTGCATATTCAAAATTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR GCA 90 bp CAGTGTACATTCTTCACAGTCAAGAGACTCTCAAACCTCAATAAACACCATGTAGGGAAGTGTCTCGGCTaGCTGGCTGCCTGCTTTCAG +
Preference number: 4 (lower is better)
Translates to: QCTFFTVKRLSNLNKHHVGKCLG*LAACFQ
Trigger: CTGAAAGCAGGCAGCCAGGCAGCCGAGACACTTCCC...TACATGGTGTTTATTGAGGTTTGAGAGTCTCTTGACTGTGAAGAATGTACACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR GCA 90 bp CAGTGTACATTCTTCACAGTCAAGAGACTCTCAAACCTCAATAAACACCATGTACCCTGGGCGCGACACTaGAAACATCCTGCTGCTTGC +
Preference number: 4 (lower is better)
Translates to: QCTFFTVKRLSNLNKHHVPWARH*KHPAAC
Trigger: GCAAGCAGCAGGATGTTTGCAGTGTCGCGCCCAGGG...TACATGGTGTTTATTGAGGTTTGAGAGTCTCTTGACTGTGAAGAATGTACACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR GCA 90 bp AAATGTTCTAACATGAATTTAGGGAATTATGGTGAGTGCTTCACCTTCCCCACAGACATCTCCACATTCTaGCCCTCGGTCGCCGTCACG +
Preference number: 4 (lower is better)
Translates to: KCSNMNLGNYGECFTFPTDISTF*PSVAVT
Trigger: CGTGACGGCGACCGAGGGGCAGAATGTGGAGATGTC...TGTGGGGAAGGTGAAGCACTCACCATAATTCCCTAAATTCATGTTAGAACATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR GCA 90 bp TGCAATGACCAAGGCATGCCAGGAGAGTTGCTCATCTACATTATAAGGCAGGGCTGGCATCAGTCACCCTaGACTCATATAAGCCTTCAT +
Preference number: 4 (lower is better)
Translates to: CNDQGMPGELLIYIIRQGWHQSP*THISLH
Trigger: ATGAAGGCTTATATGAGTGCAGGGTGACTGATGCCA...GCCCTGCCTTATAATGTAGATGAGCAACTCTCCTGGCATGCCTTGGTCATTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS-3UTR GCA 90 bp GAAAATATGATCAACAAAGCATGTGATAGCCTCTTCATTTATGCTTCCGGAAGCGAGGCTTCGAAGGCCTaGATTCTGCGGGCATGGCTG +
Preference number: 4 (lower is better)
Translates to: ENMINKACDSLFIYASGSEASKA*ILRAWL
Trigger: CAGCCATGCCCGCAGAATGCAGGCCTTCGAAGCCTC...GCTTCCGGAAGCATAAATGAAGAGGCTATCACATGCTTTGTTGATCATATTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR GCA 90 bp GAGATTGGCCATAACCAGCACTTGCCACCATTGAACAAGAACTGTAATCAAGAACTGCGGAGACGTTCTTaGGGGGCTTCATATCCTGCA +
Preference number: 4 (lower is better)
Translates to: EIGHNQHLPPLNKNCNQELRRRS*GASYPA
Trigger: TGCAGGATATGAAGCCCCGCAAGAACGTCTCCGCAG...TTCTTGATTACAGTTCTTGTTCAATGGTGGCAAGTGCTGGTTATGGCCAATCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CCA 90 bp AAATGTAGTTCTATAAACCTCCTAGGATTGACGGAGATTGGCCATAACCAGCACCTGCTTTCAGCTACCTaGCAGCTCGTCCAACGTCAG +
Preference number: 4 (lower is better)
Translates to: KCSSINLLGLTEIGHNQHLLSAT*QLVQRQ
Trigger: CTGACGTTGGACGAGCTGCCAGGTAGCTGAAAGCAG...GTGCTGGTTATGGCCAATCTCCGTCAATCCTAGGAGGTTTATAGAACTACATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CCA 90 bp CTACATTATAAGGCAGGGCAAACTCAGAGAACCCTAATCCAAGTGCCCTACAAAAAGGTTAGAACCAGCTaGCTGGGATTCAGCGAGGCT +
Preference number: 4 (lower is better)
Translates to: LHYKAGQTQRTLIQVPYKKVRTS*LGFSEA
Trigger: AGCCTCGCTGAATCCCAGCCAGCTGGTTCTAACCTT...TTTGTAGGGCACTTGGATTAGGGTTCTCTGAGTTTGCCCTGCCTTATAATGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS-3UTR CCA 90 bp GGAATTATGGTGAGTGCTTCACCTTCCCCACATTCGCCTCCTAGGCAAATTTTCAAGGGATTGCGATTCTaGAAGGTTAGAACCAGCTGG +
Preference number: 4 (lower is better)
Translates to: GIMVSASPSPHSPPRQIFKGLRF*KVRTSW
Trigger: CCAGCTGGTTCTAACCTTCCAGAATCGCAATCCCTT...GAAAATTTGCCTAGGAGGCGAATGTGGGGAAGGTGAAGCACTCACCATAATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CCA 90 bp TACAATTTTGAATATGCACTTTCCAGAATGAAGCAGAGGACAATAGAGACCATCATCCTGCTGCTTGCTTaGCGAGGGCTGGCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: YNFEYALSRMKQRTIETIILLLA*RGLAVG
Trigger: CCCCACAGCCAGCCCTCGCCAAGCAAGCAGCAGGAT...GATGGTCTCTATTGTCCTCTGCTTCATTCTGGAAAGTGCATATTCAAAATTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CCA 90 bp TTTGCTGTCCGCTCCGTAGATTTTACAGGCGATTTGCTCTTTGCTTTAAGAAGATCAGTCTCAGAGCCCTaGGCGCGACACTGCAAACAT +
Preference number: 4 (lower is better)
Translates to: FAVRSVDFTGDLLFALRRSVSEP*ARHCKH
Trigger: ATGTTTGCAGTGTCGCGCCCAGGGCTCTGAGACTGA...TCTTCTTAAAGCAAAGAGCAAATCGCCTGTAAAATCTACGGAGCGGACAGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407838.7
CDS-3UTR CCA 90 bp AAATGTTCTAACATGAATTTAGGGAATTATGGTGAGTGCTTCACCTTCCCCACAAGGCGTGCGAGTGGATaGCAGGCTCAGTCTCAGAGC +
Preference number: 4 (lower is better)
Translates to: KCSNMNLGNYGECFTFPTRRASG*QAQSQS
Trigger: GCTCTGAGACTGAGCCTGCCATCCACTCGCACGCCT...TGTGGGGAAGGTGAAGCACTCACCATAATTCCCTAAATTCATGTTAGAACATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CCA 90 bp CACACATTGGGCTTCAGAGAGGCTAAGCCATCTGTTCATCAGACTGACATAAATCGCAGGAACCACCATTaGATCTCCAGATACACCGAG +
Preference number: 4 (lower is better)
Translates to: HTLGFREAKPSVHQTDINRRNHH*ISRYTE
Trigger: CTCGGTGTATCTGGAGATCCAATGGTGGTTCCTGCG...ATTTATGTCAGTCTGATGAACAGATGGCTTAGCCTCTCTGAAGCCCAATGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS-3UTR CCA 90 bp AAATGTTCTAACATGAATTTAGGGAATTATGGTGAGTGCTTCACCTTCCCCACAAGCCATGGATGCTGCTaGGGATGGCTGCGGAGACGT +
Preference number: 4 (lower is better)
Translates to: KCSNMNLGNYGECFTFPTSHGCC*GWLRRR
Trigger: ACGTCTCCGCAGCCATCCCCAGCAGCATCCATGGCT...TGTGGGGAAGGTGAAGCACTCACCATAATTCCCTAAATTCATGTTAGAACATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CCA 90 bp GAAAATATGATCAACAAAGCATGTGATAGCCTCTTCATTTATGCTTCCGGAAGCAGCCATGGATGCTGCTaGGGATGGCTGCGGAGACGT +
Preference number: 4 (lower is better)
Translates to: ENMINKACDSLFIYASGSSHGCC*GWLRRR
Trigger: ACGTCTCCGCAGCCATCCCCAGCAGCATCCATGGCT...GCTTCCGGAAGCATAAATGAAGAGGCTATCACATGCTTTGTTGATCATATTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CCA 90 bp AAATGTAGTTCTATAAACCTCCTAGGATTGACGGAGATTGGCCATAACCAGCACAGTGCGTTCGTTGGTTaGCAGAGCCATGGATGCTGC +
Preference number: 4 (lower is better)
Translates to: KCSSINLLGLTEIGHNQHSAFVG*QSHGCC
Trigger: GCAGCATCCATGGCTCTGCCAACCAACGAACGCACT...GTGCTGGTTATGGCCAATCTCCGTCAATCCTAGGAGGTTTATAGAACTACATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CCA 90 bp GAGATTGGCCATAACCAGCACTTGCCACCATTGAACAAGAACTGTAATCAAGAAGTGGAGTGCGTTCGTTaGTTGGCAGAGCCATGGATG +
Preference number: 4 (lower is better)
Translates to: EIGHNQHLPPLNKNCNQEVECVR*LAEPWM
Trigger: CATCCATGGCTCTGCCAACCAACGAACGCACTCCAC...TTCTTGATTACAGTTCTTGTTCAATGGTGGCAAGTGCTGGTTATGGCCAATCTC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CCA 90 bp TTACACATAAGTAAAGTGAGTGACTGGACTGCCCCAGCTTCTGAAATCGAAATTCTTGAGGGCTGGAGGTaGAGTGCGTTCGTTGGTTGG +
Preference number: 4 (lower is better)
Translates to: LHISKVSDWTAPASEIEILEGWR*SAFVGW
Trigger: CCAACCAACGAACGCACTCCACCTCCAGCCCTCAAG...AATTTCGATTTCAGAAGCTGGGGCAGTCCAGTCACTCACTTTACTTATGTGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS-3UTR CCA 90 bp ACATTAATGCCATTCAGAACAGCTTTAACTTGCACAGCTGCCTTCAGAATCCTGCTACCACTTGAGGGCTaGAGGTGGAGTGCGTTCGTT +
Preference number: 4 (lower is better)
Translates to: TLMPFRTALTCTAAFRILLPLEG*RWSAFV
Trigger: AACGAACGCACTCCACCTCCAGCCCTCAAGTGGTAG...CAGGATTCTGAAGGCAGCTGTGCAAGTTAAAGCTGTTCTGAATGGCATTAATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS-3UTR TCA 90 bp ACTTTCCAGAATGAAGCAGAGGACAATAGAGACCATCTGCAGCTGTCAAACCTGGTCTGTGGAGATGTTTaGCTTCTGGAAGGATTGGAG +
Preference number: 4 (lower is better)
Translates to: TFQNEAEDNRDHLQLSNLVCGDV*LLEGLE
Trigger: CTCCAATCCTTCCAGAAGTCAAACATCTCCACAGAC...CAGGTTTGACAGCTGCAGATGGTCTCTATTGTCCTCTGCTTCATTCTGGAAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404951.5
CDS-3UTR TCA 90 bp AACATGAATTTAGGGAATTATGGTGAGTGCTTCACCTTCCCCACATTCGCCTCCTTTAGGGAATTATGGTaGGTGCTTCACCTTCCCCAC +
Preference number: 4 (lower is better)
Translates to: NMNLGNYGECFTFPTFASFRELW*VLHLPH
Trigger: GTGGGGAAGGTGAAGCACTCACCATAATTCCCTAAA...GGAGGCGAATGTGGGGAAGGTGAAGCACTCACCATAATTCCCTAAATTCATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR GCA 90 bp TTACACATAAGTAAAGTGAGTGACTGGACTGCCCCAGCTTCTGAAATCGAAATTACACTGCAAACATCCTaGTGCTTGCTTGGCGAGGGC +
Preference number: 4 (lower is better)
Translates to: LHISKVSDWTAPASEIEITLQTS*CLLGEG
Trigger: GCCCTCGCCAAGCAAGCAGCAGGATGTTTGCAGTGT...AATTTCGATTTCAGAAGCTGGGGCAGTCCAGTCACTCACTTTACTTATGTGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS-3UTR GCA 90 bp TACAATTTTGAATATGCACTTTCCAGAATGAAGCAGAGGACAATAGAGACCATCGACATCTCCACATTCTaGCCCTCGGTCGCCGTCACG +
Preference number: 4 (lower is better)
Translates to: YNFEYALSRMKQRTIETIDISTF*PSVAVT
Trigger: CGTGACGGCGACCGAGGGGCAGAATGTGGAGATGTC...GATGGTCTCTATTGTCCTCTGCTTCATTCTGGAAAGTGCATATTCAAAATTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR GCA 90 bp TACAATTTTGAATATGCACTTTCCAGAATGAAGCAGAGGACAATAGAGACCATCGAGGCTTCGAAGGCCTaGATTCTGCGGGCATGGCTG +
Preference number: 4 (lower is better)
Translates to: YNFEYALSRMKQRTIETIEASKA*ILRAWL
Trigger: CAGCCATGCCCGCAGAATGCAGGCCTTCGAAGCCTC...GATGGTCTCTATTGTCCTCTGCTTCATTCTGGAAAGTGCATATTCAAAATTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR GCA 90 bp AAAACCAGACAGTGTACATTCTTCACAGTCAAGAGACTCTCAAACCTCAATAAACGGGGCTTCATATCCTaGAGCCACATGGGCGAGGCT +
Preference number: 4 (lower is better)
Translates to: KTRQCTFFTVKRLSNLNKRGFIS*SHMGEA
Trigger: AGCCTCGCCCATGTGGCTGCAGGATATGAAGCCCCG...TTTATTGAGGTTTGAGAGTCTCTTGACTGTGAAGAATGTACACTGTCTGGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR GCA 90 bp TACAATTTTGAATATGCACTTTCCAGAATGAAGCAGAGGACAATAGAGACCATCGGGCTGGAGGTGGAGTaGGTTCGTTGGTTGGCAGAG +
Preference number: 4 (lower is better)
Translates to: YNFEYALSRMKQRTIETIGLEVE*VRWLAE
Trigger: CTCTGCCAACCAACGAACGCACTCCACCTCCAGCCC...GATGGTCTCTATTGTCCTCTGCTTCATTCTGGAAAGTGCATATTCAAAATTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR GCA 90 bp CTACATTATAAGGCAGGGCAAACTCAGAGAACCCTAATCCAAGTGCCCTACAAATTGGTGCAGGCTCGGTaGTCACCTCTCATAATCACT +
Preference number: 4 (lower is better)
Translates to: LHYKAGQTQRTLIQVPYKLVQAR*SPLIIT
Trigger: AGTGATTATGAGAGGTGAGCACCGAGCCTGCACCAA...TTTGTAGGGCACTTGGATTAGGGTTCTCTGAGTTTGCCCTGCCTTATAATGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS-3UTR GCA 90 bp CTACATTATAAGGCAGGGCAAACTCAGAGAACCCTAATCCAAGTGCCCTACAAAGGTTGTGCAGGGTACTaGTCATTCCACGAAGCCTTT +
Preference number: 4 (lower is better)
Translates to: LHYKAGQTQRTLIQVPYKGCAGY*SFHEAF
Trigger: AAAGGCTTCGTGGAATGAGCAGTACCCTGCACAACC...TTTGTAGGGCACTTGGATTAGGGTTCTCTGAGTTTGCCCTGCCTTATAATGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS-3UTR CCA 90 bp AAAACCAGACAGTGTACATTCTTCACAGTCAAGAGACTCTCAAACCTCAATAAACCAGGCTGGAATCGCTaGGAAGTGTCTCGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: KTRQCTFFTVKRLSNLNKPGWNR*EVSRLP
Trigger: AGGCAGCCGAGACACTTCCCAGCGATTCCAGCCTGG...TTTATTGAGGTTTGAGAGTCTCTTGACTGTGAAGAATGTACACTGTCTGGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CCA 90 bp GGGTCCTTTAGTAGGAAATTAGTGGTATCCATAGTAAATATTCCCTATCCTGATCCAGGCTGGAATCGCTaGGAAGTGTCTCGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: GSFSRKLVVSIVNIPYPDPGWNR*EVSRLP
Trigger: AGGCAGCCGAGACACTTCCCAGCGATTCCAGCCTGG...ATCAGGATAGGGAATATTTACTATGGATACCACTAATTTCCTACTAAAGGACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CCA 90 bp AAAACCAGACAGTGTACATTCTTCACAGTCAAGAGACTCTCAAACCTCAATAAACTGCGGAGCCCAGGCTaGAATCGCTGGGAAGTGTCT +
Preference number: 4 (lower is better)
Translates to: KTRQCTFFTVKRLSNLNKLRSPG*NRWEVS
Trigger: AGACACTTCCCAGCGATTCCAGCCTGGGCTCCGCAG...TTTATTGAGGTTTGAGAGTCTCTTGACTGTGAAGAATGTACACTGTCTGGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CCA 90 bp GAGATTGGCCATAACCAGCACTTGCCACCATTGAACAAGAACTGTAATCAAGAATTAGAACCAGCTGGCTaGGATTCAGCGAGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: EIGHNQHLPPLNKNCNQELEPAG*DSARLP
Trigger: AGGAAGCCTCGCTGAATCCCAGCCAGCTGGTTCTAA...TTCTTGATTACAGTTCTTGTTCAATGGTGGCAAGTGCTGGTTATGGCCAATCTC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CCA 90 bp TTACACATAAGTAAAGTGAGTGACTGGACTGCCCCAGCTTCTGAAATCGAAATTAGAAAGGCGTGCGAGTaGATGGCAGGCTCAGTCTCA +
Preference number: 4 (lower is better)
Translates to: LHISKVSDWTAPASEIEIRKACE*MAGSVS
Trigger: TGAGACTGAGCCTGCCATCCACTCGCACGCCTTTCT...AATTTCGATTTCAGAAGCTGGGGCAGTCCAGTCACTCACTTTACTTATGTGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS-3UTR CCA 90 bp AAATGTTCTAACATGAATTTAGGGAATTATGGTGAGTGCTTCACCTTCCCCACATGGTTGGCAGAGCCATaGATGCTGCTGGGGATGGCT +
Preference number: 4 (lower is better)
Translates to: KCSNMNLGNYGECFTFPTWLAEP*MLLGMA
Trigger: AGCCATCCCCAGCAGCATCCATGGCTCTGCCAACCA...TGTGGGGAAGGTGAAGCACTCACCATAATTCCCTAAATTCATGTTAGAACATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR TCA 90 bp CTCCTAGGATTGACGGAGATTGGCCATAACCAGCACTTGCCACCATTGAACAAGTCGGTAAATTTTGCTTaGGAAGAAAGCCCTTGTTGT +
Preference number: 4 (lower is better)
Translates to: LLGLTEIGHNQHLPPLNKSVNFA*EESPCC
Trigger: ACAACAAGGGCTTTCTTCTCAAGCAAAATTTACCGA...CTTGTTCAATGGTGGCAAGTGCTGGTTATGGCCAATCTCCGTCAATCCTAGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR TCA 90 bp GGAATTATGGTGAGTGCTTCACCTTCCCCACATTCGCCTCCTAGGCAAATTTTCAGCACTTGCCACCATTaGACAAGAACTGTAATCAAG +
Preference number: 4 (lower is better)
Translates to: GIMVSASPSPHSPPRQIFSTCHH*TRTVIK
Trigger: CTTGATTACAGTTCTTGTTCAATGGTGGCAAGTGCT...GAAAATTTGCCTAGGAGGCGAATGTGGGGAAGGTGAAGCACTCACCATAATTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR GCA 90 bp AAAACCAGACAGTGTACATTCTTCACAGTCAAGAGACTCTCAAACCTCAATAAACTGCAAACATCCTGCTaGTTGCTTGGCGAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: KTRQCTFFTVKRLSNLNKLQTSC*LLGEGW
Trigger: CCAGCCCTCGCCAAGCAAGCAGCAGGATGTTTGCAG...TTTATTGAGGTTTGAGAGTCTCTTGACTGTGAAGAATGTACACTGTCTGGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR GCA 90 bp CAGTGTACATTCTTCACAGTCAAGAGACTCTCAAACCTCAATAAACACCATGTACCTGAAAGAAAGGCGTaGGAGTGGATGGCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: QCTFFTVKRLSNLNKHHVPERKA*EWMAGS
Trigger: TGAGCCTGCCATCCACTCGCACGCCTTTCTTTCAGG...TACATGGTGTTTATTGAGGTTTGAGAGTCTCTTGACTGTGAAGAATGTACACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR GCA 90 bp ATAATGATAAAAATCAGCTTGCATGAGGGTCGCAGTACATCTACTTTGAAGTTAGGGCTGGAGGTGGAGTaGGTTCGTTGGTTGGCAGAG +
Preference number: 4 (lower is better)
Translates to: IMIKISLHEGRSTSTLKLGLEVE*VRWLAE
Trigger: CTCTGCCAACCAACGAACGCACTCCACCTCCAGCCC...TAACTTCAAAGTAGATGTACTGCGACCCTCATGCAAGCTGATTTTTATCATTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR GCA 90 bp GTACATTCTTCACAGTCAAGAGACTCTCAAACCTCAATAAACACCATGTATAAAGGGCTGGAGGTGGAGTaGGTTCGTTGGTTGGCAGAG +
Preference number: 4 (lower is better)
Translates to: VHSSQSRDSQTSINTMYKGLEVE*VRWLAE
Trigger: CTCTGCCAACCAACGAACGCACTCCACCTCCAGCCC...TTTATACATGGTGTTTATTGAGGTTTGAGAGTCTCTTGACTGTGAAGAATGTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR GCA 90 bp TGCAATGACCAAGGCATGCCAGGAGAGTTGCTCATCTACATTATAAGGCAGGGCAGTGCCCTACAAATCTaGAAATCACATCCATTAGGA +
Preference number: 4 (lower is better)
Translates to: CNDQGMPGELLIYIIRQGSALQI*KSHPLG
Trigger: TCCTAATGGATGTGATTTGCAGATTTGTAGGGCACT...GCCCTGCCTTATAATGTAGATGAGCAACTCTCCTGGCATGCCTTGGTCATTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS-3UTR GCA 90 bp CAGTGTACATTCTTCACAGTCAAGAGACTCTCAAACCTCAATAAACACCATGTAGTGGGTGCAGGGTGGTaGTTGGAGTTTAGGGTCAAC +
Preference number: 4 (lower is better)
Translates to: QCTFFTVKRLSNLNKHHVVGAGW*LEFRVN
Trigger: GTTGACCCTAAACTCCAAGCACCACCCTGCACCCAC...TACATGGTGTTTATTGAGGTTTGAGAGTCTCTTGACTGTGAAGAATGTACACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CCA 90 bp AAATGTTCTAACATGAATTTAGGGAATTATGGTGAGTGCTTCACCTTCCCCACACTGCTTTCAGCTACCTaGCAGCTCGTCCAACGTCAG +
Preference number: 4 (lower is better)
Translates to: KCSNMNLGNYGECFTFPTLLSAT*QLVQRQ
Trigger: CTGACGTTGGACGAGCTGCCAGGTAGCTGAAAGCAG...TGTGGGGAAGGTGAAGCACTCACCATAATTCCCTAAATTCATGTTAGAACATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CCA 90 bp ATAATGATAAAAATCAGCTTGCATGAGGGTCGCAGTACATCTACTTTGAAGTTACTGCGGAGCCCAGGCTaGAATCGCTGGGAAGTGTCT +
Preference number: 4 (lower is better)
Translates to: IMIKISLHEGRSTSTLKLLRSPG*NRWEVS
Trigger: AGACACTTCCCAGCGATTCCAGCCTGGGCTCCGCAG...TAACTTCAAAGTAGATGTACTGCGACCCTCATGCAAGCTGATTTTTATCATTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CCA 90 bp AAATTAGTGGTATCCATAGTAAATATTCCCTATCCTGATGACATTCAGGCCAACTTGCTTGGCGAGGGCTaGCTGTGGGGAGAAGGGATT +
Preference number: 4 (lower is better)
Translates to: KLVVSIVNIPYPDDIQANLLGEG*LWGEGI
Trigger: AATCCCTTCTCCCCACAGCCAGCCCTCGCCAAGCAA...GTTGGCCTGAATGTCATCAGGATAGGGAATATTTACTATGGATACCACTAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CCA 90 bp GAGATTGGCCATAACCAGCACTTGCCACCATTGAACAAGAACTGTAATCAAGAATGCATTCTGCGGGCATaGCTGTTGGCATTGACTTTC +
Preference number: 4 (lower is better)
Translates to: EIGHNQHLPPLNKNCNQECILRA*LLALTF
Trigger: GAAAGTCAATGCCAACAGCCATGCCCGCAGAATGCA...TTCTTGATTACAGTTCTTGTTCAATGGTGGCAAGTGCTGGTTATGGCCAATCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CCA 90 bp GGGACCTGCCATCATCTTTTGCATATTGTATTTAGCCAACAACCAAATTTTAATAGCCATGGATGCTGCTaGGGATGGCTGCGGAGACGT +
Preference number: 4 (lower is better)
Translates to: GTCHHLLHIVFSQQPNFNSHGCC*GWLRRR
Trigger: ACGTCTCCGCAGCCATCCCCAGCAGCATCCATGGCT...ATTAAAATTTGGTTGTTGGCTAAATACAATATGCAAAAGATGATGGCAGGTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402613.4
ENST00000407838.7
CDS-3UTR CCA 90 bp AAAACCAGACAGTGTACATTCTTCACAGTCAAGAGACTCTCAAACCTCAATAAATGGTTGGCAGAGCCATaGATGCTGCTGGGGATGGCT +
Preference number: 4 (lower is better)
Translates to: KTRQCTFFTVKRLSNLNKWLAEP*MLLGMA
Trigger: AGCCATCCCCAGCAGCATCCATGGCTCTGCCAACCA...TTTATTGAGGTTTGAGAGTCTCTTGACTGTGAAGAATGTACACTGTCTGGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CCA 90 bp AAATGTTCTAACATGAATTTAGGGAATTATGGTGAGTGCTTCACCTTCCCCACAAGTGCGTTCGTTGGTTaGCAGAGCCATGGATGCTGC +
Preference number: 4 (lower is better)
Translates to: KCSNMNLGNYGECFTFPTSAFVG*QSHGCC
Trigger: GCAGCATCCATGGCTCTGCCAACCAACGAACGCACT...TGTGGGGAAGGTGAAGCACTCACCATAATTCCCTAAATTCATGTTAGAACATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CCA 90 bp CTCCTAGGATTGACGGAGATTGGCCATAACCAGCACTTGCCACCATTGAACAAGATGGAAGAGTCTCTCTaGAAGGAAAACTTAGGTCAT +
Preference number: 4 (lower is better)
Translates to: LLGLTEIGHNQHLPPLNKMEESL*KENLGH
Trigger: ATGACCTAAGTTTTCCTTCCAGAGAGACTCTTCCAT...CTTGTTCAATGGTGGCAAGTGCTGGTTATGGCCAATCTCCGTCAATCCTAGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402613.4
ENST00000407838.7
CDS-3UTR TCA 90 bp AAAACCAGACAGTGTACATTCTTCACAGTCAAGAGACTCTCAAACCTCAATAAAATTTTGGCTACCACTTaGGGGCTGGAGGTGGAGTGC +
Preference number: 4 (lower is better)
Translates to: KTRQCTFFTVKRLSNLNKILATT*GLEVEC
Trigger: GCACTCCACCTCCAGCCCTCAAGTGGTAGCCAAAAT...TTTATTGAGGTTTGAGAGTCTCTTGACTGTGAAGAATGTACACTGTCTGGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR TCA 90 bp CTACATTATAAGGCAGGGCAAACTCAGAGAACCCTAATCCAAGTGCCCTACAAAAGAGCTATGGGTCGCTaGAAATGCATGATATGGCAT +
Preference number: 4 (lower is better)
Translates to: LHYKAGQTQRTLIQVPYKRAMGR*KCMIWH
Trigger: ATGCCATATCATGCATTTTCAGCGACCCATAGCTCT...TTTGTAGGGCACTTGGATTAGGGTTCTCTGAGTTTGCCCTGCCTTATAATGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS-3UTR TCA 90 bp AACATGAATTTAGGGAATTATGGTGAGTGCTTCACCTTCCCCACATTCGCCTCCAGCACTTGCCACCATTaGACAAGAACTGTAATCAAG +
Preference number: 4 (lower is better)
Translates to: NMNLGNYGECFTFPTFASSTCHH*TRTVIK
Trigger: CTTGATTACAGTTCTTGTTCAATGGTGGCAAGTGCT...GGAGGCGAATGTGGGGAAGGTGAAGCACTCACCATAATTCCCTAAATTCATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR TCA 90 bp AAATGTAGTTCTATAAACCTCCTAGGATTGACGGAGATTGGCCATAACCAGCACTTTAGGGAATTATGGTaGGTGCTTCACCTTCCCCAC +
Preference number: 4 (lower is better)
Translates to: KCSSINLLGLTEIGHNQHFRELW*VLHLPH
Trigger: GTGGGGAAGGTGAAGCACTCACCATAATTCCCTAAA...GTGCTGGTTATGGCCAATCTCCGTCAATCCTAGGAGGTTTATAGAACTACATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR GCA 90 bp AAAACCAGACAGTGTACATTCTTCACAGTCAAGAGACTCTCAAACCTCAATAAAAAACATCCTGCTGCTTaGTTGGCGAGGGCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: KTRQCTFFTVKRLSNLNKKHPAA*LARAGC
Trigger: ACAGCCAGCCCTCGCCAAGCAAGCAGCAGGATGTTT...TTTATTGAGGTTTGAGAGTCTCTTGACTGTGAAGAATGTACACTGTCTGGTTTT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR GCA 90 bp AAATTAGTGGTATCCATAGTAAATATTCCCTATCCTGATGACATTCAGGCCAACAAACATCCTGCTGCTTaGTTGGCGAGGGCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: KLVVSIVNIPYPDDIQANKHPAA*LARAGC
Trigger: ACAGCCAGCCCTCGCCAAGCAAGCAGCAGGATGTTT...GTTGGCCTGAATGTCATCAGGATAGGGAATATTTACTATGGATACCACTAATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR GCA 90 bp ATAATGATAAAAATCAGCTTGCATGAGGGTCGCAGTACATCTACTTTGAAGTTACTGCAAACATCCTGCTaGTTGCTTGGCGAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: IMIKISLHEGRSTSTLKLLQTSC*LLGEGW
Trigger: CCAGCCCTCGCCAAGCAAGCAGCAGGATGTTTGCAG...TAACTTCAAAGTAGATGTACTGCGACCCTCATGCAAGCTGATTTTTATCATTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR GCA 90 bp AAATTAGTGGTATCCATAGTAAATATTCCCTATCCTGATGACATTCAGGCCAACCCTGAAAGAAAGGCGTaGGAGTGGATGGCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: KLVVSIVNIPYPDDIQANPERKA*EWMAGS
Trigger: TGAGCCTGCCATCCACTCGCACGCCTTTCTTTCAGG...GTTGGCCTGAATGTCATCAGGATAGGGAATATTTACTATGGATACCACTAATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR GCA 90 bp GTACATTCTTCACAGTCAAGAGACTCTCAAACCTCAATAAACACCATGTATAAACGAAGGCCTGCATTCTaGGGGCATGGCTGTTGGCAT +
Preference number: 4 (lower is better)
Translates to: VHSSQSRDSQTSINTMYKRRPAF*GHGCWH
Trigger: ATGCCAACAGCCATGCCCGCAGAATGCAGGCCTTCG...TTTATACATGGTGTTTATTGAGGTTTGAGAGTCTCTTGACTGTGAAGAATGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR GCA 90 bp AAATTAGTGGTATCCATAGTAAATATTCCCTATCCTGATGACATTCAGGCCAACCTGCGGAGACGTTCTTaGGGGGCTTCATATCCTGCA +
Preference number: 4 (lower is better)
Translates to: KLVVSIVNIPYPDDIQANLRRRS*GASYPA
Trigger: TGCAGGATATGAAGCCCCGCAAGAACGTCTCCGCAG...GTTGGCCTGAATGTCATCAGGATAGGGAATATTTACTATGGATACCACTAATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR GCA 90 bp CTACATTATAAGGCAGGGCAAACTCAGAGAACCCTAATCCAAGTGCCCTACAAACCTCTCATAATCACTTaGACTGAACTAGGTCTCCGA +
Preference number: 4 (lower is better)
Translates to: LHYKAGQTQRTLIQVPYKPLIIT*TELGLR
Trigger: TCGGAGACCTAGTTCAGTGCAAGTGATTATGAGAGG...TTTGTAGGGCACTTGGATTAGGGTTCTCTGAGTTTGCCCTGCCTTATAATGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS-3UTR GCA 90 bp AAATGTAGTTCTATAAACCTCCTAGGATTGACGGAGATTGGCCATAACCAGCACGGGAATTATGGTGAGTaGTTCACCTTCCCCACATTC +
Preference number: 4 (lower is better)
Translates to: KCSSINLLGLTEIGHNQHGNYGE*FTFPTF
Trigger: GAATGTGGGGAAGGTGAAGCACTCACCATAATTCCC...GTGCTGGTTATGGCCAATCTCCGTCAATCCTAGGAGGTTTATAGAACTACATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CCA 90 bp AAATGTTCTAACATGAATTTAGGGAATTATGGTGAGTGCTTCACCTTCCCCACAAAGGTTAGAACCAGCTaGCTGGGATTCAGCGAGGCT +
Preference number: 4 (lower is better)
Translates to: KCSNMNLGNYGECFTFPTKVRTS*LGFSEA
Trigger: AGCCTCGCTGAATCCCAGCCAGCTGGTTCTAACCTT...TGTGGGGAAGGTGAAGCACTCACCATAATTCCCTAAATTCATGTTAGAACATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CCA 90 bp AAATGTAGTTCTATAAACCTCCTAGGATTGACGGAGATTGGCCATAACCAGCACAAGGGATTGCGATTCTaGAAGGTTAGAACCAGCTGG +
Preference number: 4 (lower is better)
Translates to: KCSSINLLGLTEIGHNQHKGLRF*KVRTSW
Trigger: CCAGCTGGTTCTAACCTTCCAGAATCGCAATCCCTT...GTGCTGGTTATGGCCAATCTCCGTCAATCCTAGGAGGTTTATAGAACTACATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CCA 90 bp GGGTCCTTTAGTAGGAAATTAGTGGTATCCATAGTAAATATTCCCTATCCTGATTCAGTCTCAGAGCCCTaGGCGCGACACTGCAAACAT +
Preference number: 4 (lower is better)
Translates to: GSFSRKLVVSIVNIPYPDSVSEP*ARHCKH
Trigger: ATGTTTGCAGTGTCGCGCCCAGGGCTCTGAGACTGA...ATCAGGATAGGGAATATTTACTATGGATACCACTAATTTCCTACTAAAGGACCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CCA 90 bp AAATGTTCTAACATGAATTTAGGGAATTATGGTGAGTGCTTCACCTTCCCCACACGCAGGAACCACCATTaGATCTCCAGATACACCGAG +
Preference number: 4 (lower is better)
Translates to: KCSNMNLGNYGECFTFPTRRNHH*ISRYTE
Trigger: CTCGGTGTATCTGGAGATCCAATGGTGGTTCCTGCG...TGTGGGGAAGGTGAAGCACTCACCATAATTCCCTAAATTCATGTTAGAACATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CCA 90 bp TACAATTTTGAATATGCACTTTCCAGAATGAAGCAGAGGACAATAGAGACCATCGAAGCTCCCCGTAGTTaGCATCAGTCACCCTGCACT +
Preference number: 4 (lower is better)
Translates to: YNFEYALSRMKQRTIETIEAPRS*HQSPCT
Trigger: AGTGCAGGGTGACTGATGCCAACTACGGGGAGCTTC...GATGGTCTCTATTGTCCTCTGCTTCATTCTGGAAAGTGCATATTCAAAATTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CCA 90 bp GGGTCCTTTAGTAGGAAATTAGTGGTATCCATAGTAAATATTCCCTATCCTGATAGTGCGTTCGTTGGTTaGCAGAGCCATGGATGCTGC +
Preference number: 4 (lower is better)
Translates to: GSFSRKLVVSIVNIPYPDSAFVG*QSHGCC
Trigger: GCAGCATCCATGGCTCTGCCAACCAACGAACGCACT...ATCAGGATAGGGAATATTTACTATGGATACCACTAATTTCCTACTAAAGGACCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CCA 90 bp AAATTAGTGGTATCCATAGTAAATATTCCCTATCCTGATGACATTCAGGCCAACCTACCACTTGAGGGCTaGAGGTGGAGTGCGTTCGTT +
Preference number: 4 (lower is better)
Translates to: KLVVSIVNIPYPDDIQANLPLEG*RWSAFV
Trigger: AACGAACGCACTCCACCTCCAGCCCTCAAGTGGTAG...GTTGGCCTGAATGTCATCAGGATAGGGAATATTTACTATGGATACCACTAATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CCA 90 bp TACAATTTTGAATATGCACTTTCCAGAATGAAGCAGAGGACAATAGAGACCATCCTACCACTTGAGGGCTaGAGGTGGAGTGCGTTCGTT +
Preference number: 4 (lower is better)
Translates to: YNFEYALSRMKQRTIETILPLEG*RWSAFV
Trigger: AACGAACGCACTCCACCTCCAGCCCTCAAGTGGTAG...GATGGTCTCTATTGTCCTCTGCTTCATTCTGGAAAGTGCATATTCAAAATTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CCA 90 bp GGAATTATGGTGAGTGCTTCACCTTCCCCACATTCGCCTCCTAGGCAAATTTTCATTGTGGACTTTGTTTaGGGATTTTGGCTACCACTT +
Preference number: 4 (lower is better)
Translates to: GIMVSASPSPHSPPRQIFIVDFV*GFWLPL
Trigger: AAGTGGTAGCCAAAATCCCCAAACAAAGTCCACAAT...GAAAATTTGCCTAGGAGGCGAATGTGGGGAAGGTGAAGCACTCACCATAATTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CCA 90 bp TGCAATGACCAAGGCATGCCAGGAGAGTTGCTCATCTACATTATAAGGCAGGGCATAAAAGGCTCGAAATaGGTTTCCATACCTGATTGT +
Preference number: 4 (lower is better)
Translates to: CNDQGMPGELLIYIIRQGIKGSK*VSIPDC
Trigger: ACAATCAGGTATGGAAACCCATTTCGAGCCTTTTAT...GCCCTGCCTTATAATGTAGATGAGCAACTCTCCTGGCATGCCTTGGTCATTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS-3UTR CCA 90 bp ACATTAATGCCATTCAGAACAGCTTTAACTTGCACAGCTGCCTTCAGAATCCTGCAGCAAGGCTGGCAATaGGATGCAAAAAGAGCAGTA +
Preference number: 4 (lower is better)
Translates to: TLMPFRTALTCTAAFRILQQGWQ*DAKRAV
Trigger: TACTGCTCTTTTTGCATCCCATTGCCAGCCTTGCTG...CAGGATTCTGAAGGCAGCTGTGCAAGTTAAAGCTGTTCTGAATGGCATTAATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS-3UTR CCA 90 bp AAAACCAGACAGTGTACATTCTTCACAGTCAAGAGACTCTCAAACCTCAATAAACGATTTGCTCTTTGCTaGAGGAGCCAGCACGCAGCT +
Preference number: 4 (lower is better)
Translates to: KTRQCTFFTVKRLSNLNKRFALC*RSQHAA
Trigger: AGCTGCGTGCTGGCTCCTCCAGCAAAGAGCAAATCG...TTTATTGAGGTTTGAGAGTCTCTTGACTGTGAAGAATGTACACTGTCTGGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404951.5
CDS-3UTR CCA 90 bp AAATGTAGTTCTATAAACCTCCTAGGATTGACGGAGATTGGCCATAACCAGCACAGGACAGAAAGTCCATaGCTTGTAGCTATCCTCGCA +
Preference number: 4 (lower is better)
Translates to: KCSSINLLGLTEIGHNQHRTESP*LVAILA
Trigger: TGCGAGGATAGCTACAAGCCATGGACTTTCTGTCCT...GTGCTGGTTATGGCCAATCTCCGTCAATCCTAGGAGGTTTATAGAACTACATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407838.7
CDS-3UTR CCA 90 bp GGAATTATGGTGAGTGCTTCACCTTCCCCACATTCGCCTCCTAGGCAAATTTTCATGGAAGAGTCTCTCTaGAAGGAAAACTTAGGTCAT +
Preference number: 4 (lower is better)
Translates to: GIMVSASPSPHSPPRQIFMEESL*KENLGH
Trigger: ATGACCTAAGTTTTCCTTCCAGAGAGACTCTTCCAT...GAAAATTTGCCTAGGAGGCGAATGTGGGGAAGGTGAAGCACTCACCATAATTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000402613.4
ENST00000407838.7
CDS-3UTR TCA 90 bp TACAATTTTGAATATGCACTTTCCAGAATGAAGCAGAGGACAATAGAGACCATCCTTCACAGTTCTGTGTaGCGTTGGGAAGGTGGGAAG +
Preference number: 4 (lower is better)
Translates to: YNFEYALSRMKQRTIETILHSSV*RWEGGK
Trigger: CTTCCCACCTTCCCAACGTCACACAGAACTGTGAAG...GATGGTCTCTATTGTCCTCTGCTTCATTCTGGAAAGTGCATATTCAAAATTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404951.5
CDS-3UTR TCA 90 bp GGAATTATGGTGAGTGCTTCACCTTCCCCACATTCGCCTCCTAGGCAAATTTTCGCAGTACATCTACTTTaGAGTTATAGCACACATACT +
Preference number: 4 (lower is better)
Translates to: GIMVSASPSPHSPPRQIFAVHLL*SYSTHT
Trigger: AGTATGTGTGCTATAACTTCAAAGTAGATGTACTGC...GAAAATTTGCCTAGGAGGCGAATGTGGGGAAGGTGAAGCACTCACCATAATTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR TCA 90 bp AAATGTAGTTCTATAAACCTCCTAGGATTGACGGAGATTGGCCATAACCAGCACAAAAATCAGCTTGCATaGGGGTCGCAGTACATCTAC +
Preference number: 4 (lower is better)
Translates to: KCSSINLLGLTEIGHNQHKNQLA*GSQYIY
Trigger: GTAGATGTACTGCGACCCTCATGCAAGCTGATTTTT...GTGCTGGTTATGGCCAATCTCCGTCAATCCTAGGAGGTTTATAGAACTACATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR TCA 90 bp GAAAATATGATCAACAAAGCATGTGATAGCCTCTTCATTTATGCTTCCGGAAGCAGCTATCCTCGCACCTaGTTGTGGACTTTGTTTGGG +
Preference number: 4 (lower is better)
Translates to: ENMINKACDSLFIYASGSSYPRT*LWTLFG
Trigger: CCCAAACAAAGTCCACAATCAGGTGCGAGGATAGCT...GCTTCCGGAAGCATAAATGAAGAGGCTATCACATGCTTTGTTGATCATATTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407838.7
CDS-3UTR GCA 90 bp GGGACCTGCCATCATCTTTTGCATATTGTATTTAGCCAACAACCAAATTTTAATACACTGCAAACATCCTaGTGCTTGCTTGGCGAGGGC +
Preference number: 4 (lower is better)
Translates to: GTCHHLLHIVFSQQPNFNTLQTS*CLLGEG
Trigger: GCCCTCGCCAAGCAAGCAGCAGGATGTTTGCAGTGT...ATTAAAATTTGGTTGTTGGCTAAATACAATATGCAAAAGATGATGGCAGGTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402613.4
ENST00000407838.7
CDS-3UTR GCA 90 bp CACACATTGGGCTTCAGAGAGGCTAAGCCATCTGTTCATCAGACTGACATAAATGAGTTGCCTTATCTCTaGACCACTTACAGTCTTCAA +
Preference number: 4 (lower is better)
Translates to: HTLGFREAKPSVHQTDINELPYL*TTYSLQ
Trigger: TTGAAGACTGTAAGTGGTGCAGAGATAAGGCAACTC...ATTTATGTCAGTCTGATGAACAGATGGCTTAGCCTCTCTGAAGCCCAATGTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS-3UTR GCA 90 bp CACACATTGGGCTTCAGAGAGGCTAAGCCATCTGTTCATCAGACTGACATAAATAGAACAGCTTTAACTTaGACAGCTGCCTTCAGAATC +
Preference number: 4 (lower is better)
Translates to: HTLGFREAKPSVHQTDINRTALT*TAAFRI
Trigger: GATTCTGAAGGCAGCTGTGCAAGTTAAAGCTGTTCT...ATTTATGTCAGTCTGATGAACAGATGGCTTAGCCTCTCTGAAGCCCAATGTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS-3UTR GCA 90 bp CTACATTATAAGGCAGGGCAAACTCAGAGAACCCTAATCCAAGTGCCCTACAAACAGACTGACATAAATTaGAATGACCAAGGCATGCCA +
Preference number: 4 (lower is better)
Translates to: LHYKAGQTQRTLIQVPYKQTDIN*NDQGMP
Trigger: TGGCATGCCTTGGTCATTGCAATTTATGTCAGTCTG...TTTGTAGGGCACTTGGATTAGGGTTCTCTGAGTTTGCCCTGCCTTATAATGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS-3UTR GCA 90 bp ATAATGATAAAAATCAGCTTGCATGAGGGTCGCAGTACATCTACTTTGAAGTTAGTGGGTGCAGGGTGGTaGTTGGAGTTTAGGGTCAAC +
Preference number: 4 (lower is better)
Translates to: IMIKISLHEGRSTSTLKLVGAGW*LEFRVN
Trigger: GTTGACCCTAAACTCCAAGCACCACCCTGCACCCAC...TAACTTCAAAGTAGATGTACTGCGACCCTCATGCAAGCTGATTTTTATCATTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR GCA 90 bp AAATGTAGTTCTATAAACCTCCTAGGATTGACGGAGATTGGCCATAACCAGCACACAATAGAGACCATCTaGAGCTGTCAAACCTGTGGA +
Preference number: 4 (lower is better)
Translates to: KCSSINLLGLTEIGHNQHTIETI*SCQTCG
Trigger: TCCACAGGTTTGACAGCTGCAGATGGTCTCTATTGT...GTGCTGGTTATGGCCAATCTCCGTCAATCCTAGGAGGTTTATAGAACTACATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CCA 90 bp TACAATTTTGAATATGCACTTTCCAGAATGAAGCAGAGGACAATAGAGACCATCTTAGAACCAGCTGGCTaGGATTCAGCGAGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: YNFEYALSRMKQRTIETILEPAG*DSARLP
Trigger: AGGAAGCCTCGCTGAATCCCAGCCAGCTGGTTCTAA...GATGGTCTCTATTGTCCTCTGCTTCATTCTGGAAAGTGCATATTCAAAATTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CCA 90 bp GGGTCCTTTAGTAGGAAATTAGTGGTATCCATAGTAAATATTCCCTATCCTGATAAGGTTAGAACCAGCTaGCTGGGATTCAGCGAGGCT +
Preference number: 4 (lower is better)
Translates to: GSFSRKLVVSIVNIPYPDKVRTS*LGFSEA
Trigger: AGCCTCGCTGAATCCCAGCCAGCTGGTTCTAACCTT...ATCAGGATAGGGAATATTTACTATGGATACCACTAATTTCCTACTAAAGGACCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CCA 90 bp GTACATTCTTCACAGTCAAGAGACTCTCAAACCTCAATAAACACCATGTATAAAAGAAAGGCGTGCGAGTaGATGGCAGGCTCAGTCTCA +
Preference number: 4 (lower is better)
Translates to: VHSSQSRDSQTSINTMYKRKACE*MAGSVS
Trigger: TGAGACTGAGCCTGCCATCCACTCGCACGCCTTTCT...TTTATACATGGTGTTTATTGAGGTTTGAGAGTCTCTTGACTGTGAAGAATGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CCA 90 bp ATAATGATAAAAATCAGCTTGCATGAGGGTCGCAGTACATCTACTTTGAAGTTAAGAAAGGCGTGCGAGTaGATGGCAGGCTCAGTCTCA +
Preference number: 4 (lower is better)
Translates to: IMIKISLHEGRSTSTLKLRKACE*MAGSVS
Trigger: TGAGACTGAGCCTGCCATCCACTCGCACGCCTTTCT...TAACTTCAAAGTAGATGTACTGCGACCCTCATGCAAGCTGATTTTTATCATTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CCA 90 bp AAATTAGTGGTATCCATAGTAAATATTCCCTATCCTGATGACATTCAGGCCAACCGCAGGAACCACCATTaGATCTCCAGATACACCGAG +
Preference number: 4 (lower is better)
Translates to: KLVVSIVNIPYPDDIQANRRNHH*ISRYTE
Trigger: CTCGGTGTATCTGGAGATCCAATGGTGGTTCCTGCG...GTTGGCCTGAATGTCATCAGGATAGGGAATATTTACTATGGATACCACTAATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CCA 90 bp GGGACCTGCCATCATCTTTTGCATATTGTATTTAGCCAACAACCAAATTTTAATGAAGCTCCCCGTAGTTaGCATCAGTCACCCTGCACT +
Preference number: 4 (lower is better)
Translates to: GTCHHLLHIVFSQQPNFNEAPRS*HQSPCT
Trigger: AGTGCAGGGTGACTGATGCCAACTACGGGGAGCTTC...ATTAAAATTTGGTTGTTGGCTAAATACAATATGCAAAAGATGATGGCAGGTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000402613.4
ENST00000407838.7
CDS-3UTR CCA 90 bp ATAATGATAAAAATCAGCTTGCATGAGGGTCGCAGTACATCTACTTTGAAGTTAGAAGCTCCCCGTAGTTaGCATCAGTCACCCTGCACT +
Preference number: 4 (lower is better)
Translates to: IMIKISLHEGRSTSTLKLEAPRS*HQSPCT
Trigger: AGTGCAGGGTGACTGATGCCAACTACGGGGAGCTTC...TAACTTCAAAGTAGATGTACTGCGACCCTCATGCAAGCTGATTTTTATCATTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CCA 90 bp GGGACCTGCCATCATCTTTTGCATATTGTATTTAGCCAACAACCAAATTTTAATGTGGAGTGCGTTCGTTaGTTGGCAGAGCCATGGATG +
Preference number: 4 (lower is better)
Translates to: GTCHHLLHIVFSQQPNFNVECVR*LAEPWM
Trigger: CATCCATGGCTCTGCCAACCAACGAACGCACTCCAC...ATTAAAATTTGGTTGTTGGCTAAATACAATATGCAAAAGATGATGGCAGGTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402613.4
ENST00000407838.7
CDS-3UTR CCA 90 bp CACACATTGGGCTTCAGAGAGGCTAAGCCATCTGTTCATCAGACTGACATAAATTCCACGCATTTCCATTaGCTGAATGACTGCATACAT +
Preference number: 4 (lower is better)
Translates to: HTLGFREAKPSVHQTDINSTHFH*LNDCIH
Trigger: ATGTATGCAGTCATTCAGCCAATGGAAATGCGTGGA...ATTTATGTCAGTCTGATGAACAGATGGCTTAGCCTCTCTGAAGCCCAATGTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS-3UTR CCA 90 bp TTACACATAAGTAAAGTGAGTGACTGGACTGCCCCAGCTTCTGAAATCGAAATTAGTAAAGTGAGTGACTaGACTGCCCCAGCTTCTGAA +
Preference number: 4 (lower is better)
Translates to: LHISKVSDWTAPASEIEISKVSD*TAPASE
Trigger: TTCAGAAGCTGGGGCAGTCCAGTCACTCACTTTACT...AATTTCGATTTCAGAAGCTGGGGCAGTCCAGTCACTCACTTTACTTATGTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302287.7
3UTR CAA 72 bp CTCCTAGGATTGACGGAGATTGGCCATAACCAGCACTaGCCACCATTGAACAAGAACTGTAATCAAGAAAAA +
Preference number: 4 (lower is better)
Translates to: LLGLTEIGHNQH*PPLNKNCNQEK
Trigger: TTTTTCTTGATTACAGTTCTTGTTCAATGGTGGCAAGTGCTGGTTATGGCCAATCTCCGTCAATCCTAGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR TCA 90 bp CTACATTATAAGGCAGGGCAAACTCAGAGAACCCTAATCCAAGTGCCCTACAAATCGGTAAATTTTGCTTaGGAAGAAAGCCCTTGTTGT +
Preference number: 4 (lower is better)
Translates to: LHYKAGQTQRTLIQVPYKSVNFA*EESPCC
Trigger: ACAACAAGGGCTTTCTTCTCAAGCAAAATTTACCGA...TTTGTAGGGCACTTGGATTAGGGTTCTCTGAGTTTGCCCTGCCTTATAATGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS-3UTR TCA 90 bp AACATGAATTTAGGGAATTATGGTGAGTGCTTCACCTTCCCCACATTCGCCTCCGCAGTACATCTACTTTaGAGTTATAGCACACATACT +
Preference number: 4 (lower is better)
Translates to: NMNLGNYGECFTFPTFASAVHLL*SYSTHT
Trigger: AGTATGTGTGCTATAACTTCAAAGTAGATGTACTGC...GGAGGCGAATGTGGGGAAGGTGAAGCACTCACCATAATTCCCTAAATTCATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR GCA 90 bp ACTTTCCAGAATGAAGCAGAGGACAATAGAGACCATCTGCAGCTGTCAAACCTGAAACTCGGTAAATTTTaGTTGAGAAGAAAGCCCTTG +
Preference number: 4 (lower is better)
Translates to: TFQNEAEDNRDHLQLSNLKLGKF*LRRKPL
Trigger: CAAGGGCTTTCTTCTCAAGCAAAATTTACCGAGTTT...CAGGTTTGACAGCTGCAGATGGTCTCTATTGTCCTCTGCTTCATTCTGGAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR GCA 90 bp GAAAATATGATCAACAAAGCATGTGATAGCCTCTTCATTTATGCTTCCGGAAGCTGTGGGAGATGTCATTaGCTTGGACTTTCACTGTGC +
Preference number: 4 (lower is better)
Translates to: ENMINKACDSLFIYASGSCGRCH*LGLSLC
Trigger: GCACAGTGAAAGTCCAAGGCAATGACATCTCCCACA...GCTTCCGGAAGCATAAATGAAGAGGCTATCACATGCTTTGTTGATCATATTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR GCA 90 bp ACATTAATGCCATTCAGAACAGCTTTAACTTGCACAGCTGCCTTCAGAATCCTGAATTCACAGAGGAGTTaGCTTATCTCTGCACCACTT +
Preference number: 4 (lower is better)
Translates to: TLMPFRTALTCTAAFRILNSQRS*LISAPL
Trigger: AAGTGGTGCAGAGATAAGGCAACTCCTCTGTGAATT...CAGGATTCTGAAGGCAGCTGTGCAAGTTAAAGCTGTTCTGAATGGCATTAATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS-3UTR GCA 90 bp ACATTAATGCCATTCAGAACAGCTTTAACTTGCACAGCTGCCTTCAGAATCCTGAAGTCAGTATGTTTGTaGTCCCTTCATCCCATGTCA +
Preference number: 4 (lower is better)
Translates to: TLMPFRTALTCTAAFRILKSVCL*SLHPMS
Trigger: TGACATGGGATGAAGGGAGCACAAACATACTGACTT...CAGGATTCTGAAGGCAGCTGTGCAAGTTAAAGCTGTTCTGAATGGCATTAATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS-3UTR GCA 90 bp GAAAATATGATCAACAAAGCATGTGATAGCCTCTTCATTTATGCTTCCGGAAGCGGGAATTATGGTGAGTaGTTCACCTTCCCCACATTC +
Preference number: 4 (lower is better)
Translates to: ENMINKACDSLFIYASGSGNYGE*FTFPTF
Trigger: GAATGTGGGGAAGGTGAAGCACTCACCATAATTCCC...GCTTCCGGAAGCATAAATGAAGAGGCTATCACATGCTTTGTTGATCATATTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CCA 90 bp AAAACCAGACAGTGTACATTCTTCACAGTCAAGAGACTCTCAAACCTCAATAAATGCATTCTGCGGGCATaGCTGTTGGCATTGACTTTC +
Preference number: 4 (lower is better)
Translates to: KTRQCTFFTVKRLSNLNKCILRA*LLALTF
Trigger: GAAAGTCAATGCCAACAGCCATGCCCGCAGAATGCA...TTTATTGAGGTTTGAGAGTCTCTTGACTGTGAAGAATGTACACTGTCTGGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CCA 90 bp AAATGTTCTAACATGAATTTAGGGAATTATGGTGAGTGCTTCACCTTCCCCACATTTGTTTGGGGATTTTaGCTACCACTTGAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: KCSNMNLGNYGECFTFPTFVWGF*LPLEGW
Trigger: CCAGCCCTCAAGTGGTAGCCAAAATCCCCAAACAAA...TGTGGGGAAGGTGAAGCACTCACCATAATTCCCTAAATTCATGTTAGAACATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CCA 90 bp CTACATTATAAGGCAGGGCAAACTCAGAGAACCCTAATCCAAGTGCCCTACAAAATTGTGGACTTTGTTTaGGGATTTTGGCTACCACTT +
Preference number: 4 (lower is better)
Translates to: LHYKAGQTQRTLIQVPYKIVDFV*GFWLPL
Trigger: AAGTGGTAGCCAAAATCCCCAAACAAAGTCCACAAT...TTTGTAGGGCACTTGGATTAGGGTTCTCTGAGTTTGCCCTGCCTTATAATGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS-3UTR CCA 90 bp AAAACCAGACAGTGTACATTCTTCACAGTCAAGAGACTCTCAAACCTCAATAAAGTGCAGGGTGGTGCTTaGAGTTTAGGGTCAACTTTG +
Preference number: 4 (lower is better)
Translates to: KTRQCTFFTVKRLSNLNKVQGGA*SLGSTL
Trigger: CAAAGTTGACCCTAAACTCCAAGCACCACCCTGCAC...TTTATTGAGGTTTGAGAGTCTCTTGACTGTGAAGAATGTACACTGTCTGGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
3UTR CAA 72 bp ACTGCATACATTAATGCCATTCAGAACAGCTTTAACTaGCACAGCTGCCTTCAGAATCCTGTGACTAAGCTT +
Preference number: 4 (lower is better)
Translates to: TAYINAIQNSFN*HSCLQNPVTKL
Trigger: AAGCTTAGTCACAGGATTCTGAAGGCAGCTGTGCAAGTTAAAGCTGTTCTGAATGGCATTAATGTATGCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS-3UTR TCA 90 bp CAGTGTACATTCTTCACAGTCAAGAGACTCTCAAACCTCAATAAACACCATGTACTCACTTTGGAAATCTaGAGCTTGTGGGAGATGTCA +
Preference number: 4 (lower is better)
Translates to: QCTFFTVKRLSNLNKHHVLTLEI*SLWEMS
Trigger: TGACATCTCCCACAAGCTTCAGATTTCCAAAGTGAG...TACATGGTGTTTATTGAGGTTTGAGAGTCTCTTGACTGTGAAGAATGTACACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR TCA 90 bp ATAATGATAAAAATCAGCTTGCATGAGGGTCGCAGTACATCTACTTTGAAGTTACCCTTGAGCAGTCAGTaGGATGATTTTAGTCGCCGA +
Preference number: 4 (lower is better)
Translates to: IMIKISLHEGRSTSTLKLPLSSQ*DDFSRR
Trigger: TCGGCGACTAAAATCATCTCACTGACTGCTCAAGGG...TAACTTCAAAGTAGATGTACTGCGACCCTCATGCAAGCTGATTTTTATCATTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR TCA 90 bp CAGTGTACATTCTTCACAGTCAAGAGACTCTCAAACCTCAATAAACACCATGTAAAAAATCAGCTTGCATaGGGGTCGCAGTACATCTAC +
Preference number: 4 (lower is better)
Translates to: QCTFFTVKRLSNLNKHHVKNQLA*GSQYIY
Trigger: GTAGATGTACTGCGACCCTCATGCAAGCTGATTTTT...TACATGGTGTTTATTGAGGTTTGAGAGTCTCTTGACTGTGAAGAATGTACACTG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR TCA 90 bp TACAATTTTGAATATGCACTTTCCAGAATGAAGCAGAGGACAATAGAGACCATCTTTAGGGAATTATGGTaGGTGCTTCACCTTCCCCAC +
Preference number: 4 (lower is better)
Translates to: YNFEYALSRMKQRTIETIFRELW*VLHLPH
Trigger: GTGGGGAAGGTGAAGCACTCACCATAATTCCCTAAA...GATGGTCTCTATTGTCCTCTGCTTCATTCTGGAAAGTGCATATTCAAAATTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR GCA 90 bp CACACATTGGGCTTCAGAGAGGCTAAGCCATCTGTTCATCAGACTGACATAAATAAACTCGGTAAATTTTaGTTGAGAAGAAAGCCCTTG +
Preference number: 4 (lower is better)
Translates to: HTLGFREAKPSVHQTDINKLGKF*LRRKPL
Trigger: CAAGGGCTTTCTTCTCAAGCAAAATTTACCGAGTTT...ATTTATGTCAGTCTGATGAACAGATGGCTTAGCCTCTCTGAAGCCCAATGTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS-3UTR GCA 90 bp AAAACCAGACAGTGTACATTCTTCACAGTCAAGAGACTCTCAAACCTCAATAAATGTGGGAGATGTCATTaGCTTGGACTTTCACTGTGC +
Preference number: 4 (lower is better)
Translates to: KTRQCTFFTVKRLSNLNKCGRCH*LGLSLC
Trigger: GCACAGTGAAAGTCCAAGGCAATGACATCTCCCACA...TTTATTGAGGTTTGAGAGTCTCTTGACTGTGAAGAATGTACACTGTCTGGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR GCA 90 bp GAAAATATGATCAACAAAGCATGTGATAGCCTCTTCATTTATGCTTCCGGAAGCTGGCATCAGTCACCCTaGACTCATATAAGCCTTCAT +
Preference number: 4 (lower is better)
Translates to: ENMINKACDSLFIYASGSWHQSP*THISLH
Trigger: ATGAAGGCTTATATGAGTGCAGGGTGACTGATGCCA...GCTTCCGGAAGCATAAATGAAGAGGCTATCACATGCTTTGTTGATCATATTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR GCA 90 bp ACATTAATGCCATTCAGAACAGCTTTAACTTGCACAGCTGCCTTCAGAATCCTGAGGCTGGCAATGGGATaGAAAAAGAGCAGTAATTTT +
Preference number: 4 (lower is better)
Translates to: TLMPFRTALTCTAAFRILRLAMG*KKSSNF
Trigger: AAAATTACTGCTCTTTTTGCATCCCATTGCCAGCCT...CAGGATTCTGAAGGCAGCTGTGCAAGTTAAAGCTGTTCTGAATGGCATTAATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS-3UTR GCA 90 bp CAGTGTACATTCTTCACAGTCAAGAGACTCTCAAACCTCAATAAACACCATGTAATTTTACAGGCGATTTaGTCTTTGCTGGAGGAGCCA +
Preference number: 4 (lower is better)
Translates to: QCTFFTVKRLSNLNKHHVILQAI*SLLEEP
Trigger: TGGCTCCTCCAGCAAAGAGCAAATCGCCTGTAAAAT...TACATGGTGTTTATTGAGGTTTGAGAGTCTCTTGACTGTGAAGAATGTACACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404951.5
CDS-3UTR GCA 90 bp GAATATGCACTTTCCAGAATGAAGCAGAGGACAATAGAGACCATCTGCAGCTGTTCCTCCTTGTTGACTTaGAGTGTTGATAGTTTTGTT +
Preference number: 4 (lower is better)
Translates to: EYALSRMKQRTIETICSCSSLLT*SVDSFV
Trigger: AACAAAACTATCAACACTGCAAGTCAACAAGGAGGA...ACAGCTGCAGATGGTCTCTATTGTCCTCTGCTTCATTCTGGAAAGTGCATATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CCA 90 bp GGGACCTGCCATCATCTTTTGCATATTGTATTTAGCCAACAACCAAATTTTAATTGCATTCTGCGGGCATaGCTGTTGGCATTGACTTTC +
Preference number: 4 (lower is better)
Translates to: GTCHHLLHIVFSQQPNFNCILRA*LLALTF
Trigger: GAAAGTCAATGCCAACAGCCATGCCCGCAGAATGCA...ATTAAAATTTGGTTGTTGGCTAAATACAATATGCAAAAGATGATGGCAGGTCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402613.4
ENST00000407838.7
CDS-3UTR CCA 90 bp AAAACCAGACAGTGTACATTCTTCACAGTCAAGAGACTCTCAAACCTCAATAAATTTGTTTGGGGATTTTaGCTACCACTTGAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: KTRQCTFFTVKRLSNLNKFVWGF*LPLEGW
Trigger: CCAGCCCTCAAGTGGTAGCCAAAATCCCCAAACAAA...TTTATTGAGGTTTGAGAGTCTCTTGACTGTGAAGAATGTACACTGTCTGGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CCA 90 bp TACAATTTTGAATATGCACTTTCCAGAATGAAGCAGAGGACAATAGAGACCATCTTTGTTTGGGGATTTTaGCTACCACTTGAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: YNFEYALSRMKQRTIETIFVWGF*LPLEGW
Trigger: CCAGCCCTCAAGTGGTAGCCAAAATCCCCAAACAAA...GATGGTCTCTATTGTCCTCTGCTTCATTCTGGAAAGTGCATATTCAAAATTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CCA 90 bp AAATGTAGTTCTATAAACCTCCTAGGATTGACGGAGATTGGCCATAACCAGCACATTGTGGACTTTGTTTaGGGATTTTGGCTACCACTT +
Preference number: 4 (lower is better)
Translates to: KCSSINLLGLTEIGHNQHIVDFV*GFWLPL
Trigger: AAGTGGTAGCCAAAATCCCCAAACAAAGTCCACAAT...GTGCTGGTTATGGCCAATCTCCGTCAATCCTAGGAGGTTTATAGAACTACATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CCA 90 bp CACACATTGGGCTTCAGAGAGGCTAAGCCATCTGTTCATCAGACTGACATAAATAAAATCAAAAGCCCTTaGAGAATAGTCCTGCTTAGA +
Preference number: 4 (lower is better)
Translates to: HTLGFREAKPSVHQTDINKIKSP*RIVLLR
Trigger: TCTAAGCAGGACTATTCTCCAAGGGCTTTTGATTTT...ATTTATGTCAGTCTGATGAACAGATGGCTTAGCCTCTCTGAAGCCCAATGTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS-3UTR CCA 90 bp AAATGTTCTAACATGAATTTAGGGAATTATGGTGAGTGCTTCACCTTCCCCACAAGTAGAGGTGGTCTGTaGAGATGTTTGACTTCTGGA +
Preference number: 4 (lower is better)
Translates to: KCSNMNLGNYGECFTFPTSRGGL*RCLTSG
Trigger: TCCAGAAGTCAAACATCTCCACAGACCACCTCTACT...TGTGGGGAAGGTGAAGCACTCACCATAATTCCCTAAATTCATGTTAGAACATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404951.5
CDS-3UTR CCA 90 bp ATAATGATAAAAATCAGCTTGCATGAGGGTCGCAGTACATCTACTTTGAAGTTAGTGCAGGGTGGTGCTTaGAGTTTAGGGTCAACTTTG +
Preference number: 4 (lower is better)
Translates to: IMIKISLHEGRSTSTLKLVQGGA*SLGSTL
Trigger: CAAAGTTGACCCTAAACTCCAAGCACCACCCTGCAC...TAACTTCAAAGTAGATGTACTGCGACCCTCATGCAAGCTGATTTTTATCATTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CCA 90 bp GTACATTCTTCACAGTCAAGAGACTCTCAAACCTCAATAAACACCATGTATAAAGTGCAGGGTGGTGCTTaGAGTTTAGGGTCAACTTTG +
Preference number: 4 (lower is better)
Translates to: VHSSQSRDSQTSINTMYKVQGGA*SLGSTL
Trigger: CAAAGTTGACCCTAAACTCCAAGCACCACCCTGCAC...TTTATACATGGTGTTTATTGAGGTTTGAGAGTCTCTTGACTGTGAAGAATGTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR TCA 90 bp AAATTAGTGGTATCCATAGTAAATATTCCCTATCCTGATGACATTCAGGCCAACAAGGATTGGAGACACTaGTTGTGGACTTTGTTTGGG +
Preference number: 4 (lower is better)
Translates to: KLVVSIVNIPYPDDIQANKDWRH*LWTLFG
Trigger: CCCAAACAAAGTCCACAATCAGTGTCTCCAATCCTT...GTTGGCCTGAATGTCATCAGGATAGGGAATATTTACTATGGATACCACTAATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404951.5
CDS-3UTR GCA 90 bp AAATGTAGTTCTATAAACCTCCTAGGATTGACGGAGATTGGCCATAACCAGCACAAACTCGGTAAATTTTaGTTGAGAAGAAAGCCCTTG +
Preference number: 4 (lower is better)
Translates to: KCSSINLLGLTEIGHNQHKLGKF*LRRKPL
Trigger: CAAGGGCTTTCTTCTCAAGCAAAATTTACCGAGTTT...GTGCTGGTTATGGCCAATCTCCGTCAATCCTAGGAGGTTTATAGAACTACATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR GCA 90 bp GAGATTGGCCATAACCAGCACTTGCCACCATTGAACAAGAACTGTAATCAAGAAAAACTCGGTAAATTTTaGTTGAGAAGAAAGCCCTTG +
Preference number: 4 (lower is better)
Translates to: EIGHNQHLPPLNKNCNQEKLGKF*LRRKPL
Trigger: CAAGGGCTTTCTTCTCAAGCAAAATTTACCGAGTTT...TTCTTGATTACAGTTCTTGTTCAATGGTGGCAAGTGCTGGTTATGGCCAATCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR GCA 90 bp GGGACCTGCCATCATCTTTTGCATATTGTATTTAGCCAACAACCAAATTTTAATTGTGGGAGATGTCATTaGCTTGGACTTTCACTGTGC +
Preference number: 4 (lower is better)
Translates to: GTCHHLLHIVFSQQPNFNCGRCH*LGLSLC
Trigger: GCACAGTGAAAGTCCAAGGCAATGACATCTCCCACA...ATTAAAATTTGGTTGTTGGCTAAATACAATATGCAAAAGATGATGGCAGGTCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402613.4
ENST00000407838.7
CDS-3UTR GCA 90 bp GGGTCCTTTAGTAGGAAATTAGTGGTATCCATAGTAAATATTCCCTATCCTGATTGGCATCAGTCACCCTaGACTCATATAAGCCTTCAT +
Preference number: 4 (lower is better)
Translates to: GSFSRKLVVSIVNIPYPDWHQSP*THISLH
Trigger: ATGAAGGCTTATATGAGTGCAGGGTGACTGATGCCA...ATCAGGATAGGGAATATTTACTATGGATACCACTAATTTCCTACTAAAGGACCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR GCA 90 bp TACAATTTTGAATATGCACTTTCCAGAATGAAGCAGAGGACAATAGAGACCATCTGGCATCAGTCACCCTaGACTCATATAAGCCTTCAT +
Preference number: 4 (lower is better)
Translates to: YNFEYALSRMKQRTIETIWHQSP*THISLH
Trigger: ATGAAGGCTTATATGAGTGCAGGGTGACTGATGCCA...GATGGTCTCTATTGTCCTCTGCTTCATTCTGGAAAGTGCATATTCAAAATTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR GCA 90 bp TTTGCTGTCCGCTCCGTAGATTTTACAGGCGATTTGCTCTTTGCTTTAAGAAGATCCTCCTTGTTGACTTaGAGTGTTGATAGTTTTGTT +
Preference number: 4 (lower is better)
Translates to: FAVRSVDFTGDLLFALRRSSLLT*SVDSFV
Trigger: AACAAAACTATCAACACTGCAAGTCAACAAGGAGGA...TCTTCTTAAAGCAAAGAGCAAATCGCCTGTAAAATCTACGGAGCGGACAGCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407838.7
CDS-3UTR GCA 90 bp GGGTCCTTTAGTAGGAAATTAGTGGTATCCATAGTAAATATTCCCTATCCTGATACAATAGAGACCATCTaGAGCTGTCAAACCTGTGGA +
Preference number: 4 (lower is better)
Translates to: GSFSRKLVVSIVNIPYPDTIETI*SCQTCG
Trigger: TCCACAGGTTTGACAGCTGCAGATGGTCTCTATTGT...ATCAGGATAGGGAATATTTACTATGGATACCACTAATTTCCTACTAAAGGACCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR GCA 90 bp ATAATGATAAAAATCAGCTTGCATGAGGGTCGCAGTACATCTACTTTGAAGTTAGGGAATTATGGTGAGTaGTTCACCTTCCCCACATTC +
Preference number: 4 (lower is better)
Translates to: IMIKISLHEGRSTSTLKLGNYGE*FTFPTF
Trigger: GAATGTGGGGAAGGTGAAGCACTCACCATAATTCCC...TAACTTCAAAGTAGATGTACTGCGACCCTCATGCAAGCTGATTTTTATCATTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CCA 90 bp ATAATGATAAAAATCAGCTTGCATGAGGGTCGCAGTACATCTACTTTGAAGTTAAAGGGATTGCGATTCTaGAAGGTTAGAACCAGCTGG +
Preference number: 4 (lower is better)
Translates to: IMIKISLHEGRSTSTLKLKGLRF*KVRTSW
Trigger: CCAGCTGGTTCTAACCTTCCAGAATCGCAATCCCTT...TAACTTCAAAGTAGATGTACTGCGACCCTCATGCAAGCTGATTTTTATCATTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR TCA 90 bp GGGACCTGCCATCATCTTTTGCATATTGTATTTAGCCAACAACCAAATTTTAATCTCACTTTGGAAATCTaGAGCTTGTGGGAGATGTCA +
Preference number: 4 (lower is better)
Translates to: GTCHHLLHIVFSQQPNFNLTLEI*SLWEMS
Trigger: TGACATCTCCCACAAGCTTCAGATTTCCAAAGTGAG...ATTAAAATTTGGTTGTTGGCTAAATACAATATGCAAAAGATGATGGCAGGTCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402613.4
ENST00000407838.7
CDS-3UTR TCA 90 bp AAATTAGTGGTATCCATAGTAAATATTCCCTATCCTGATGACATTCAGGCCAACAGCACTTGCCACCATTaGACAAGAACTGTAATCAAG +
Preference number: 4 (lower is better)
Translates to: KLVVSIVNIPYPDDIQANSTCHH*TRTVIK
Trigger: CTTGATTACAGTTCTTGTTCAATGGTGGCAAGTGCT...GTTGGCCTGAATGTCATCAGGATAGGGAATATTTACTATGGATACCACTAATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR TCA 90 bp GGGTCCTTTAGTAGGAAATTAGTGGTATCCATAGTAAATATTCCCTATCCTGATTCGGTAAATTTTGCTTaGGAAGAAAGCCCTTGTTGT +
Preference number: 4 (lower is better)
Translates to: GSFSRKLVVSIVNIPYPDSVNFA*EESPCC
Trigger: ACAACAAGGGCTTTCTTCTCAAGCAAAATTTACCGA...ATCAGGATAGGGAATATTTACTATGGATACCACTAATTTCCTACTAAAGGACCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR TCA 90 bp GTACATTCTTCACAGTCAAGAGACTCTCAAACCTCAATAAACACCATGTATAAATCGGTAAATTTTGCTTaGGAAGAAAGCCCTTGTTGT +
Preference number: 4 (lower is better)
Translates to: VHSSQSRDSQTSINTMYKSVNFA*EESPCC
Trigger: ACAACAAGGGCTTTCTTCTCAAGCAAAATTTACCGA...TTTATACATGGTGTTTATTGAGGTTTGAGAGTCTCTTGACTGTGAAGAATGTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR TCA 90 bp AAATTAGTGGTATCCATAGTAAATATTCCCTATCCTGATGACATTCAGGCCAACGAATGCATTTACCTTTaGAAAGCAGAGGTACTGATT +
Preference number: 4 (lower is better)
Translates to: KLVVSIVNIPYPDDIQANECIYL*KAEVLI
Trigger: AATCAGTACCTCTGCTTTTCAAAGGTAAATGCATTC...GTTGGCCTGAATGTCATCAGGATAGGGAATATTTACTATGGATACCACTAATTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402613.4
ENST00000407838.7
CDS-3UTR GCA 90 bp AAAACCAGACAGTGTACATTCTTCACAGTCAAGAGACTCTCAAACCTCAATAAATCCTCCTTGTTGACTTaGAGTGTTGATAGTTTTGTT +
Preference number: 4 (lower is better)
Translates to: KTRQCTFFTVKRLSNLNKSSLLT*SVDSFV
Trigger: AACAAAACTATCAACACTGCAAGTCAACAAGGAGGA...TTTATTGAGGTTTGAGAGTCTCTTGACTGTGAAGAATGTACACTGTCTGGTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR GCA 90 bp ATAATGATAAAAATCAGCTTGCATGAGGGTCGCAGTACATCTACTTTGAAGTTAATTTTACAGGCGATTTaGTCTTTGCTGATTGTGGAC +
Preference number: 4 (lower is better)
Translates to: IMIKISLHEGRSTSTLKLILQAI*SLLIVD
Trigger: GTCCACAATCAGCAAAGAGCAAATCGCCTGTAAAAT...TAACTTCAAAGTAGATGTACTGCGACCCTCATGCAAGCTGATTTTTATCATTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000402613.4
CDS-3UTR CCA 90 bp GTACATTCTTCACAGTCAAGAGACTCTCAAACCTCAATAAACACCATGTATAAAATTGTGGACTTTGTTTaGGGATTTTGGCTACCACTT +
Preference number: 4 (lower is better)
Translates to: VHSSQSRDSQTSINTMYKIVDFV*GFWLPL
Trigger: AAGTGGTAGCCAAAATCCCCAAACAAAGTCCACAAT...TTTATACATGGTGTTTATTGAGGTTTGAGAGTCTCTTGACTGTGAAGAATGTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR TCA 90 bp ATAATGATAAAAATCAGCTTGCATGAGGGTCGCAGTACATCTACTTTGAAGTTAGCAGTACATCTACTTTaGAGTTATAGCACACATACT +
Preference number: 4 (lower is better)
Translates to: IMIKISLHEGRSTSTLKLAVHLL*SYSTHT
Trigger: AGTATGTGTGCTATAACTTCAAAGTAGATGTACTGC...TAACTTCAAAGTAGATGTACTGCGACCCTCATGCAAGCTGATTTTTATCATTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR TCA 90 bp GTACATTCTTCACAGTCAAGAGACTCTCAAACCTCAATAAACACCATGTATAAAGAATGCATTTACCTTTaGAAAGCAGAGGTACTGATT +
Preference number: 4 (lower is better)
Translates to: VHSSQSRDSQTSINTMYKECIYL*KAEVLI
Trigger: AATCAGTACCTCTGCTTTTCAAAGGTAAATGCATTC...TTTATACATGGTGTTTATTGAGGTTTGAGAGTCTCTTGACTGTGAAGAATGTAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402613.4
ENST00000407838.7
3UTR CAA 72 bp TTCTTTCTCATGTTATTCCTTAAAGTAATGTCCTCCTaGTTGACTTGCAGTGTTGATAGTTTTGTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: FFLMLFLKVMSS*LTCSVDSFVLP
Trigger: GGGAAGAACAAAACTATCAACACTGCAAGTCAACAAGGAGGACATTACTTTAAGGAATAACATGAGAAAGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS TCA 90 bp CTACCTGGCAGCTCGTCCAACGTCAGCCCGCCGCTCCGGCTTGCGTaGTCACTGCCCTCCCTAAACACGGAGCCGGCTCGGGAAGTGGGG +
Preference number: 5 (lower is better)
Translates to: LPGSSSNVSPPLRLA*SLPSLNTEPAREVG
Trigger: CCCCACTTCCCGAGCCGGCTCCGTGTTTAGGGAGGGCAGTGATCACGCAAGCCGGAGCGGCGGGCTGACGTTGGACGAGCTGCCAGGTAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302287.7
ENST00000407838.7
ENST00000495904.1
CDS GCA 90 bp GCCCAGGCTGGAATCGCTGGGAAGTGTCTCGGCTGCCTGGCTGCCTaGTTTCAGCTACCTGGCAGCTCGTCCAACGTCAGCCCGCCGCTC +
Preference number: 5 (lower is better)
Translates to: AQAGIAGKCLGCLAA*FQLPGSSSNVSPPL
Trigger: GAGCGGCGGGCTGACGTTGGACGAGCTGCCAGGTAGCTGAAAGCAGGCAGCCAGGCAGCCGAGACACTTCCCAGCGATTCCAGCCTGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302287.7
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
ENST00000495904.1
CDS GCA 90 bp CGGAGCCCAGGCTGGAATCGCTGGGAAGTGTCTCGGCTGCCTGGCTaGCTGCTTTCAGCTACCTGGCAGCTCGTCCAACGTCAGCCCGCC +
Preference number: 5 (lower is better)
Translates to: RSPGWNRWEVSRLPG*LLSATWQLVQRQPA
Trigger: GGCGGGCTGACGTTGGACGAGCTGCCAGGTAGCTGAAAGCAGGCAGCCAGGCAGCCGAGACACTTCCCAGCGATTCCAGCCTGGGCTCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302287.7
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
ENST00000495904.1
CDS CCA 90 bp CGCTGGGAAGTGTCTCGGCTGCCTGGCTGCCTGCTTTCAGCTACCTaGCAGCTCGTCCAACGTCAGCCCGCCGCTCCGGCTTGCGTGATC +
Preference number: 5 (lower is better)
Translates to: RWEVSRLPGCLLSAT*QLVQRQPAAPACVI
Trigger: GATCACGCAAGCCGGAGCGGCGGGCTGACGTTGGACGAGCTGCCAGGTAGCTGAAAGCAGGCAGCCAGGCAGCCGAGACACTTCCCAGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302287.7
ENST00000402613.4
ENST00000407838.7
ENST00000495904.1
CDS GCA 90 bp TCAGCTACCTGGCAGCTCGTCCAACGTCAGCCCGCCGCTCCGGCTTaGGTGATCACTGCCCTCCCTAAACACGGAGCCGGCTCGGGAAGT +
Preference number: 5 (lower is better)
Translates to: SATWQLVQRQPAAPA*VITALPKHGAGSGS
Trigger: ACTTCCCGAGCCGGCTCCGTGTTTAGGGAGGGCAGTGATCACGCAAGCCGGAGCGGCGGGCTGACGTTGGACGAGCTGCCAGGTAGCTGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302287.7
ENST00000402613.4
ENST00000407838.7
ENST00000495904.1
CDS GCA 90 bp GTATCTAATGAGGCAAGCAAGGGGCACCCGGCTGTCCGGCTGTCCTaGAGCGCTGGCAAGCCGCCTTCTCGGGGACAGGGAAGGGCTGTG +
Preference number: 5 (lower is better)
Translates to: VSNEASKGHPAVRLS*SAGKPPSRGQGRAV
Trigger: CACAGCCCTTCCCTGTCCCCGAGAAGGCGGCTTGCCAGCGCTGCAGGACAGCCGGACAGCCGGGTGCCCCTTGCTTGCCTCATTAGATAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495904.1
CDS GCA 90 bp GCTTCCTGCGGAGCCCAGGCTGGAATCGCTGGGAAGTGTCTCGGCTaGCTGGCTGCCTGCTTTCAGCTACCTGGCAGCTCGTCCAACGTC +
Preference number: 5 (lower is better)
Translates to: ASCGAQAGIAGKCLG*LAACFQLPGSSSNV
Trigger: GACGTTGGACGAGCTGCCAGGTAGCTGAAAGCAGGCAGCCAGGCAGCCGAGACACTTCCCAGCGATTCCAGCCTGGGCTCCGCAGGAAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302287.7
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
ENST00000495904.1
CDS GCA 90 bp CTGCTGGGGATGGCTGCGGAGACGTTCTTGCGGGGCTTCATATCCTaGAGCCACATGGGCGAGGCTTCGAAGGCCTGCATTCTGCGGGCA +
Preference number: 5 (lower is better)
Translates to: LLGMAAETFLRGFIS*SHMGEASKACILRA
Trigger: TGCCCGCAGAATGCAGGCCTTCGAAGCCTCGCCCATGTGGCTGCAGGATATGAAGCCCCGCAAGAACGTCTCCGCAGCCATCCCCAGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000302287.7
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
ENST00000466888.5
ENST00000469952.1
ENST00000498834.5
CDS CCA 90 bp AACCAGCTGGCTGGGATTCAGCGAGGCTTCCTGCGGAGCCCAGGCTaGAATCGCTGGGAAGTGTCTCGGCTGCCTGGCTGCCTGCTTTCA +
Preference number: 5 (lower is better)
Translates to: NQLAGIQRGFLRSPG*NRWEVSRLPGCLLS
Trigger: TGAAAGCAGGCAGCCAGGCAGCCGAGACACTTCCCAGCGATTCCAGCCTGGGCTCCGCAGGAAGCCTCGCTGAATCCCAGCCAGCTGGTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302287.7
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
ENST00000495904.1
CDS GCA 90 bp TGGCAGAGCCATGGATGCTGCTGGGGATGGCTGCGGAGACGTTCTTaGGGGGCTTCATATCCTGCAGCCACATGGGCGAGGCTTCGAAGG +
Preference number: 5 (lower is better)
Translates to: WQSHGCCWGWLRRRS*GASYPAATWARLRR
Trigger: CCTTCGAAGCCTCGCCCATGTGGCTGCAGGATATGAAGCCCCGCAAGAACGTCTCCGCAGCCATCCCCAGCAGCATCCATGGCTCTGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000302287.7
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
ENST00000466888.5
ENST00000469952.1
ENST00000498834.5
CDS CCA 90 bp TGGCTGCGGAGACGTTCTTGCGGGGCTTCATATCCTGCAGCCACATaGGCGAGGCTTCGAAGGCCTGCATTCTGCGGGCATGGCTGTTGG +
Preference number: 5 (lower is better)
Translates to: WLRRRSCGASYPAAT*ARLRRPAFCGHGCW
Trigger: CCAACAGCCATGCCCGCAGAATGCAGGCCTTCGAAGCCTCGCCCATGTGGCTGCAGGATATGAAGCCCCGCAAGAACGTCTCCGCAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000302287.7
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
ENST00000466888.5
ENST00000469952.1
ENST00000498834.5
CDS GCA 90 bp TTCTGGAAGGTTAGAACCAGCTGGCTGGGATTCAGCGAGGCTTCCTaGGGAGCCCAGGCTGGAATCGCTGGGAAGTGTCTCGGCTGCCTG +
Preference number: 5 (lower is better)
Translates to: FWKVRTSWLGFSEAS*GAQAGIAGKCLGCL
Trigger: CAGGCAGCCGAGACACTTCCCAGCGATTCCAGCCTGGGCTCCGCAGGAAGCCTCGCTGAATCCCAGCCAGCTGGTTCTAACCTTCCAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302287.7
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
ENST00000495904.1
CDS GCA 90 bp TCAGTCTCAGAGCCCTGGGCGCGACACTGCAAACATCCTGCTGCTTaGTTGGCGAGGGCTGGCTGTGGGGAGAAGGGATTGCGATTCTGG +
Preference number: 5 (lower is better)
Translates to: SVSEPWARHCKHPAA*LARAGCGEKGLRFW
Trigger: CCAGAATCGCAATCCCTTCTCCCCACAGCCAGCCCTCGCCAAGCAAGCAGCAGGATGTTTGCAGTGTCGCGCCCAGGGCTCTGAGACTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302287.7
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
ENST00000495904.1
CDS GCA 90 bp ACCGAGGCGGAGCCGCTCTGGAAGGCGCAGGACATCTCCACATTCTaGCCCTCGGTCGCCGTCACGTTCCGCGGAAACTCGGTAAATTTT +
Preference number: 5 (lower is better)
Translates to: TEAEPLWKAQDISTF*PSVAVTFRGNSVNF
Trigger: AAAATTTACCGAGTTTCCGCGGAACGTGACGGCGACCGAGGGGCAGAATGTGGAGATGTCCTGCGCCTTCCAGAGCGGCTCCGCCTCGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302287.7
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
ENST00000495904.1
CDS GCA 90 bp GAGGGCTGGAGGTGGAGTGCGTTCGTTGGTTGGCAGAGCCATGGATaGTGCTGGGGATGGCTGCGGAGACGTTCTTGCGGGGCTTCATAT +
Preference number: 5 (lower is better)
Translates to: EGWRWSAFVGWQSHG*CWGWLRRRSCGASY
Trigger: ATATGAAGCCCCGCAAGAACGTCTCCGCAGCCATCCCCAGCAGCATCCATGGCTCTGCCAACCAACGAACGCACTCCACCTCCAGCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000302287.7
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
ENST00000466888.5
ENST00000469952.1
ENST00000498834.5
CDS CCA 90 bp TCTCAGAGCCCTGGGCGCGACACTGCAAACATCCTGCTGCTTGCTTaGCGAGGGCTGGCTGTGGGGAGAAGGGATTGCGATTCTGGAAGG +
Preference number: 5 (lower is better)
Translates to: SQSPGRDTANILLLA*RGLAVGRRDCDSGR
Trigger: CCTTCCAGAATCGCAATCCCTTCTCCCCACAGCCAGCCCTCGCCAAGCAAGCAGCAGGATGTTTGCAGTGTCGCGCCCAGGGCTCTGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302287.7
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
ENST00000495904.1
CDS CCA 90 bp GAAAGAAAGGCGTGCGAGTGGATGGCAGGCTCAGTCTCAGAGCCCTaGGCGCGACACTGCAAACATCCTGCTGCTTGCTTGGCGAGGGCT +
Preference number: 5 (lower is better)
Translates to: ERKACEWMAGSVSEP*ARHCKHPAACLARA
Trigger: AGCCCTCGCCAAGCAAGCAGCAGGATGTTTGCAGTGTCGCGCCCAGGGCTCTGAGACTGAGCCTGCCATCCACTCGCACGCCTTTCTTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302287.7
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
ENST00000495904.1
CDS CCA 90 bp GTGGGGAGAAGGGATTGCGATTCTGGAAGGTTAGAACCAGCTGGCTaGGATTCAGCGAGGCTTCCTGCGGAGCCCAGGCTGGAATCGCTG +
Preference number: 5 (lower is better)
Translates to: VGRRDCDSGRLEPAG*DSARLPAEPRLESL
Trigger: CAGCGATTCCAGCCTGGGCTCCGCAGGAAGCCTCGCTGAATCCCAGCCAGCTGGTTCTAACCTTCCAGAATCGCAATCCCTTCTCCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302287.7
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
ENST00000495904.1
CDS CCA 90 bp GGCTGTGGGGAGAAGGGATTGCGATTCTGGAAGGTTAGAACCAGCTaGCTGGGATTCAGCGAGGCTTCCTGCGGAGCCCAGGCTGGAATC +
Preference number: 5 (lower is better)
Translates to: GCGEKGLRFWKVRTS*LGFSEASCGAQAGI
Trigger: GATTCCAGCCTGGGCTCCGCAGGAAGCCTCGCTGAATCCCAGCCAGCTGGTTCTAACCTTCCAGAATCGCAATCCCTTCTCCCCACAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302287.7
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
ENST00000495904.1
CDS CCA 90 bp TGGAGTGCGTTCGTTGGTTGGCAGAGCCATGGATGCTGCTGGGGATaGCTGCGGAGACGTTCTTGCGGGGCTTCATATCCTGCAGCCACA +
Preference number: 5 (lower is better)
Translates to: WSAFVGWQSHGCCWG*LRRRSCGASYPAAT
Trigger: TGTGGCTGCAGGATATGAAGCCCCGCAAGAACGTCTCCGCAGCCATCCCCAGCAGCATCCATGGCTCTGCCAACCAACGAACGCACTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000302287.7
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
ENST00000466888.5
ENST00000469952.1
ENST00000498834.5
CDS CCA 90 bp TGGAGGTGGAGTGCGTTCGTTGGTTGGCAGAGCCATGGATGCTGCTaGGGATGGCTGCGGAGACGTTCTTGCGGGGCTTCATATCCTGCA +
Preference number: 5 (lower is better)
Translates to: WRWSAFVGWQSHGCC*GWLRRRSCGASYPA
Trigger: TGCAGGATATGAAGCCCCGCAAGAACGTCTCCGCAGCCATCCCCAGCAGCATCCATGGCTCTGCCAACCAACGAACGCACTCCACCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000302287.7
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
ENST00000466888.5
ENST00000469952.1
ENST00000498834.5
CDS CCA 90 bp GCCAGCACGCAGCTCTGCACACCAGGGGTTGATCCATGGCCAGGTTaGGGAAGAGGAGCAGGAAGCCGCTTCACAGTTCTGTGTGACGTT +
Preference number: 5 (lower is better)
Translates to: ASTQLCTPGVDPWPG*GRGAGSRFTVLCDV
Trigger: AACGTCACACAGAACTGTGAAGCGGCTTCCTGCTCCTCTTCCCCAACCTGGCCATGGATCAACCCCTGGTGTGCAGAGCTGCGTGCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404951.5
CDS-3UTR CAA 90 bp TGCAATGACCAAGGCATGCCAGGAGAGTTGCTCATCTACATTATAAGGCAGGGCGCCCGCCGCTCCGGCTaGCGTGATCACTGCCCTCCC +
Preference number: 5 (lower is better)
Translates to: CNDQGMPGELLIYIIRQGARRSG*RDHCPP
Trigger: GGGAGGGCAGTGATCACGCAAGCCGGAGCGGCGGGC...GCCCTGCCTTATAATGTAGATGAGCAACTCTCCTGGCATGCCTTGGTCATTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS TCA 90 bp GCGAGGCTTCGAAGGCCTGCATTCTGCGGGCATGGCTGTTGGCATTaGCTTTCAGATAGGCCTGGGCCTTGTGTTCCTGAAGCTCCCCGT +
Preference number: 5 (lower is better)
Translates to: ARLRRPAFCGHGCWH*LSDRPGPCVPEAPR
Trigger: ACGGGGAGCTTCAGGAACACAAGGCCCAGGCCTATCTGAAAGTCAATGCCAACAGCCATGCCCGCAGAATGCAGGCCTTCGAAGCCTCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000302287.7
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
ENST00000466888.5
ENST00000469952.1
ENST00000498834.5
CDS CCA 90 bp GTAGCCAACAGCCGAAAAGCCCTGAAAGAAAGGCGTGCGAGTGGATaGCAGGCTCAGTCTCAGAGCCCTGGGCGCGACACTGCAAACATC +
Preference number: 5 (lower is better)
Translates to: VANSRKALKERRASG*QAQSQSPGRDTANI
Trigger: GATGTTTGCAGTGTCGCGCCCAGGGCTCTGAGACTGAGCCTGCCATCCACTCGCACGCCTTTCTTTCAGGGCTTTTCGGCTGTTGGCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302287.7
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
ENST00000495904.1
CDS CCA 90 bp CAGTGTAGCCAACAGCCGAAAAGCCCTGAAAGAAAGGCGTGCGAGTaGATGGCAGGCTCAGTCTCAGAGCCCTGGGCGCGACACTGCAAA +
Preference number: 5 (lower is better)
Translates to: QCSQQPKSPERKACE*MAGSVSEPWARHCK
Trigger: TTTGCAGTGTCGCGCCCAGGGCTCTGAGACTGAGCCTGCCATCCACTCGCACGCCTTTCTTTCAGGGCTTTTCGGCTGTTGGCTACACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302287.7
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
ENST00000495904.1
CDS CCA 90 bp TTTTGGCTACCACTTGAGGGCTGGAGGTGGAGTGCGTTCGTTGGTTaGCAGAGCCATGGATGCTGCTGGGGATGGCTGCGGAGACGTTCT +
Preference number: 5 (lower is better)
Translates to: FWLPLEGWRWSAFVG*QSHGCCWGWLRRRS
Trigger: AGAACGTCTCCGCAGCCATCCCCAGCAGCATCCATGGCTCTGCCAACCAACGAACGCACTCCACCTCCAGCCCTCAAGTGGTAGCCAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000302287.7
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
ENST00000466888.5
ENST00000469952.1
ENST00000498834.5
CDS-3UTR CAA 90 bp TTTGTGCTCCCTTCATCCCATGTCACGTGTTTGAGGAAATCGGGACGGCCGCGGCAAACATCCTGCTGCTaGCTTGGCGAGGGCTGGCTG +
Preference number: 5 (lower is better)
Translates to: FVLPSSHVTCLRKSGRPRQTSCC*LGEGWL
Trigger: CAGCCAGCCCTCGCCAAGCAAGCAGCAGGATGTTTG...CCGCGGCCGTCCCGATTTCCTCAAACACGTGACATGGGATGAAGGGAGCACAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS GCA 90 bp TTTACAGGCGATTTGCTCTTTGCTGGAGGAGCCAGCACGCAGCTCTaGACACCAGGGGTTGATCCATGGCCAGGTTGGGGAAGAGGAGCA +
Preference number: 5 (lower is better)
Translates to: FTGDLLFAGGASTQL*TPGVDPWPGWGRGA
Trigger: TGCTCCTCTTCCCCAACCTGGCCATGGATCAACCCCTGGTGTGCAGAGCTGCGTGCTGGCTCCTCCAGCAAAGAGCAAATCGCCTGTAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404951.5
CDS-3UTR CAA 90 bp ACTTTCCAGAATGAAGCAGAGGACAATAGAGACCATCTGCAGCTGTCAAACCTGGCCCGCCGCTCCGGCTaGCGTGATCACTGCCCTCCC +
Preference number: 5 (lower is better)
Translates to: TFQNEAEDNRDHLQLSNLARRSG*RDHCPP
Trigger: GGGAGGGCAGTGATCACGCAAGCCGGAGCGGCGGGC...CAGGTTTGACAGCTGCAGATGGTCTCTATTGTCCTCTGCTTCATTCTGGAAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402613.4
ENST00000407838.7
CDS-3UTR CAA 90 bp GGAATTATGGTGAGTGCTTCACCTTCCCCACATTCGCCTCCTAGGCAAATTTTCCATCCTGCTGCTTGCTaGGCGAGGGCTGGCTGTGGG +
Preference number: 5 (lower is better)
Translates to: GIMVSASPSPHSPPRQIFHPAAC*ARAGCG
Trigger: CCCACAGCCAGCCCTCGCCAAGCAAGCAGCAGGATG...GAAAATTTGCCTAGGAGGCGAATGTGGGGAAGGTGAAGCACTCACCATAATTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS CCA 90 bp CTGATTGTGGACTTTGTTTGGGGATTTTGGCTACCACTTGAGGGCTaGAGGTGGAGTGCGTTCGTTGGTTGGCAGAGCCATGGATGCTGC +
Preference number: 5 (lower is better)
Translates to: LIVDFVWGFWLPLEG*RWSAFVGWQSHGCC
Trigger: GCAGCATCCATGGCTCTGCCAACCAACGAACGCACTCCACCTCCAGCCCTCAAGTGGTAGCCAAAATCCCCAAACAAAGTCCACAATCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000302287.7
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
ENST00000466888.5
ENST00000469952.1
ENST00000498834.5
CDS-3UTR CAA 90 bp CACACATTGGGCTTCAGAGAGGCTAAGCCATCTGTTCATCAGACTGACATAAATCATCCTGCTGCTTGCTaGGCGAGGGCTGGCTGTGGG +
Preference number: 5 (lower is better)
Translates to: HTLGFREAKPSVHQTDINHPAAC*ARAGCG
Trigger: CCCACAGCCAGCCCTCGCCAAGCAAGCAGCAGGATG...ATTTATGTCAGTCTGATGAACAGATGGCTTAGCCTCTCTGAAGCCCAATGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS CCA 90 bp CTGGAAGGATTGGAGACACTGATTGTGGACTTTGTTTGGGGATTTTaGCTACCACTTGAGGGCTGGAGGTGGAGTGCGTTCGTTGGTTGG +
Preference number: 5 (lower is better)
Translates to: LEGLETLIVDFVWGF*LPLEGWRWSAFVGW
Trigger: CCAACCAACGAACGCACTCCACCTCCAGCCCTCAAGTGGTAGCCAAAATCCCCAAACAAAGTCCACAATCAGTGTCTCCAATCCTTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404951.5
CDS CCA 90 bp CAGGCGATTTGCTCTTTGCTGATTGTGGACTTTGTTTGGGGATTTTaGCTACCACTTGAGGGCTGGAGGTGGAGTGCGTTCGTTGGTTGG +
Preference number: 5 (lower is better)
Translates to: QAICSLLIVDFVWGF*LPLEGWRWSAFVGW
Trigger: CCAACCAACGAACGCACTCCACCTCCAGCCCTCAAGTGGTAGCCAAAATCCCCAAACAAAGTCCACAATCAGCAAAGAGCAAATCGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402613.4
ENST00000498834.5
CDS-3UTR CAA 90 bp AAAACCAGACAGTGTACATTCTTCACAGTCAAGAGACTCTCAAACCTCAATAAAGCCCGCCGCTCCGGCTaGCGTGATCACTGCCCTCCC +
Preference number: 5 (lower is better)
Translates to: KTRQCTFFTVKRLSNLNKARRSG*RDHCPP
Trigger: GGGAGGGCAGTGATCACGCAAGCCGGAGCGGCGGGC...TTTATTGAGGTTTGAGAGTCTCTTGACTGTGAAGAATGTACACTGTCTGGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402613.4
ENST00000407838.7
CDS-3UTR CAA 90 bp ACTTTCCAGAATGAAGCAGAGGACAATAGAGACCATCTGCAGCTGTCAAACCTGTTCACTGTGCTGATCTaGGTCCCGTCGCTGTCCGGG +
Preference number: 5 (lower is better)
Translates to: TFQNEAEDNRDHLQLSNLFTVLI*VPSLSG
Trigger: CCCGGACAGCGACGGGACCAAGATCAGCACAGTGAA...CAGGTTTGACAGCTGCAGATGGTCTCTATTGTCCTCTGCTTCATTCTGGAAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CAA 90 bp GGAATTATGGTGAGTGCTTCACCTTCCCCACATTCGCCTCCTAGGCAAATTTTCGGTGGAGTGCGTTCGTaGGTTGGCAGAGCCATGGAT +
Preference number: 5 (lower is better)
Translates to: GIMVSASPSPHSPPRQIFGGVRS*VGRAMD
Trigger: ATCCATGGCTCTGCCAACCAACGAACGCACTCCACC...GAAAATTTGCCTAGGAGGCGAATGTGGGGAAGGTGAAGCACTCACCATAATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CAA 90 bp TGCAATGACCAAGGCATGCCAGGAGAGTTGCTCATCTACATTATAAGGCAGGGCGATTTTGGCTACCACTaGAGGGCTGGAGGTGGAGTG +
Preference number: 5 (lower is better)
Translates to: CNDQGMPGELLIYIIRQGDFGYH*RAGGGV
Trigger: CACTCCACCTCCAGCCCTCAAGTGGTAGCCAAAATC...GCCCTGCCTTATAATGTAGATGAGCAACTCTCCTGGCATGCCTTGGTCATTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS-3UTR CAA 90 bp CTCCTAGGATTGACGGAGATTGGCCATAACCAGCACTTGCCACCATTGAACAAGGATTTTGGCTACCACTaGAGGGCTGGAGGTGGAGTG +
Preference number: 5 (lower is better)
Translates to: LLGLTEIGHNQHLPPLNKDFGYH*RAGGGV
Trigger: CACTCCACCTCCAGCCCTCAAGTGGTAGCCAAAATC...CTTGTTCAATGGTGGCAAGTGCTGGTTATGGCCAATCTCCGTCAATCCTAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS CCA 90 bp CTTTCAGATAGGCCTGGGCCTTGTGTTCCTGAAGCTCCCCGTAGTTaGCATCAGTCACCCTGCACTCATATAAGCCTTCATCCTTTTTCC +
Preference number: 5 (lower is better)
Translates to: LSDRPGPCVPEAPRS*HQSPCTHISLHPFS
Trigger: GGAAAAAGGATGAAGGCTTATATGAGTGCAGGGTGACTGATGCCAACTACGGGGAGCTTCAGGAACACAAGGCCCAGGCCTATCTGAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000302287.7
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
ENST00000466888.5
ENST00000469952.1
ENST00000498834.5
CDS CCA 90 bp CGAAATGGGTTTCCATACCTGATTGTGGACTTTGTTTGGGGATTTTaGCTACCACTTGAGGGCTGGAGGTGGAGTGCGTTCGTTGGTTGG +
Preference number: 5 (lower is better)
Translates to: RNGFPYLIVDFVWGF*LPLEGWRWSAFVGW
Trigger: CCAACCAACGAACGCACTCCACCTCCAGCCCTCAAGTGGTAGCCAAAATCCCCAAACAAAGTCCACAATCAGGTATGGAAACCCATTTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS-3UTR CAA 90 bp CTACATTATAAGGCAGGGCAAACTCAGAGAACCCTAATCCAAGTGCCCTACAAATTCACTGTGCTGATCTaGGTCCCGTCGCTGTCCGGG +
Preference number: 5 (lower is better)
Translates to: LHYKAGQTQRTLIQVPYKFTVLI*VPSLSG
Trigger: CCCGGACAGCGACGGGACCAAGATCAGCACAGTGAA...TTTGTAGGGCACTTGGATTAGGGTTCTCTGAGTTTGCCCTGCCTTATAATGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS-3UTR CAA 90 bp TTACACATAAGTAAAGTGAGTGACTGGACTGCCCCAGCTTCTGAAATCGAAATTGGGACGGCCGCGGGGTaGTGCAGGGTACTGCTCATT +
Preference number: 5 (lower is better)
Translates to: LHISKVSDWTAPASEIEIGTAAG*CRVLLI
Trigger: AATGAGCAGTACCCTGCACAACCCCGCGGCCGTCCC...AATTTCGATTTCAGAAGCTGGGGCAGTCCAGTCACTCACTTTACTTATGTGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS-3UTR CAA 90 bp CTCCTAGGATTGACGGAGATTGGCCATAACCAGCACTTGCCACCATTGAACAAGGGTGCAGGGTGGTGCTaGGAGTTTAGGGTCAACTTT +
Preference number: 5 (lower is better)
Translates to: LLGLTEIGHNQHLPPLNKGAGWC*EFRVNF
Trigger: AAAGTTGACCCTAAACTCCAAGCACCACCCTGCACC...CTTGTTCAATGGTGGCAAGTGCTGGTTATGGCCAATCTCCGTCAATCCTAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CAA 90 bp AACATGAATTTAGGGAATTATGGTGAGTGCTTCACCTTCCCCACATTCGCCTCCCCGCAGGAACCACCATaGGATCTCCAGATACACCGA +
Preference number: 5 (lower is better)
Translates to: NMNLGNYGECFTFPTFASPQEPP*DLQIHR
Trigger: TCGGTGTATCTGGAGATCCAATGGTGGTTCCTGCGG...GGAGGCGAATGTGGGGAAGGTGAAGCACTCACCATAATTCCCTAAATTCATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CAA 90 bp ACATTAATGCCATTCAGAACAGCTTTAACTTGCACAGCTGCCTTCAGAATCCTGGCTGCGGAGACGTTCTaGCGGGGCTTCATATCCTGC +
Preference number: 5 (lower is better)
Translates to: TLMPFRTALTCTAAFRILAAETF*RGFISC
Trigger: GCAGGATATGAAGCCCCGCAAGAACGTCTCCGCAGC...CAGGATTCTGAAGGCAGCTGTGCAAGTTAAAGCTGTTCTGAATGGCATTAATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS-3UTR CAA 90 bp CTCCTAGGATTGACGGAGATTGGCCATAACCAGCACTTGCCACCATTGAACAAGGATTTTACAGGCGATTaGCTCTTTGCTGGAGGAGCC +
Preference number: 5 (lower is better)
Translates to: LLGLTEIGHNQHLPPLNKDFTGD*LFAGGA
Trigger: GGCTCCTCCAGCAAAGAGCAAATCGCCTGTAAAATC...CTTGTTCAATGGTGGCAAGTGCTGGTTATGGCCAATCTCCGTCAATCCTAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404951.5
CDS GCA 90 bp GGGCCTTGTGTTCCTGAAGCTCCCCGTAGTTGGCATCAGTCACCCTaGACTCATATAAGCCTTCATCCTTTTTCCTCACTTTGGAAATCT +
Preference number: 5 (lower is better)
Translates to: GPCVPEAPRSWHQSP*THISLHPFSSLWKS
Trigger: AGATTTCCAAAGTGAGGAAAAAGGATGAAGGCTTATATGAGTGCAGGGTGACTGATGCCAACTACGGGGAGCTTCAGGAACACAAGGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000302287.7
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
ENST00000466888.5
ENST00000469952.1
ENST00000498834.5
CDS-3UTR CAA 90 bp TACAATTTTGAATATGCACTTTCCAGAATGAAGCAGAGGACAATAGAGACCATCCATCCTGCTGCTTGCTaGGCGAGGGCTGGCTGTGGG +
Preference number: 5 (lower is better)
Translates to: YNFEYALSRMKQRTIETIHPAAC*ARAGCG
Trigger: CCCACAGCCAGCCCTCGCCAAGCAAGCAGCAGGATG...GATGGTCTCTATTGTCCTCTGCTTCATTCTGGAAAGTGCATATTCAAAATTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CAA 90 bp TGCAATGACCAAGGCATGCCAGGAGAGTTGCTCATCTACATTATAAGGCAGGGCGGAGATGTCATTGCCTaGGACTTTCACTGTGCTGAT +
Preference number: 5 (lower is better)
Translates to: CNDQGMPGELLIYIIRQGGDVIA*DFHCAD
Trigger: ATCAGCACAGTGAAAGTCCAAGGCAATGACATCTCC...GCCCTGCCTTATAATGTAGATGAGCAACTCTCCTGGCATGCCTTGGTCATTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS-3UTR CAA 90 bp ACATTAATGCCATTCAGAACAGCTTTAACTTGCACAGCTGCCTTCAGAATCCTGGAGTGCGTTCGTTGGTaGGCAGAGCCATGGATGCTG +
Preference number: 5 (lower is better)
Translates to: TLMPFRTALTCTAAFRILECVRW*AEPWML
Trigger: CAGCATCCATGGCTCTGCCAACCAACGAACGCACTC...CAGGATTCTGAAGGCAGCTGTGCAAGTTAAAGCTGTTCTGAATGGCATTAATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS-3UTR CAA 90 bp ACATTAATGCCATTCAGAACAGCTTTAACTTGCACAGCTGCCTTCAGAATCCTGGGTGGAGTGCGTTCGTaGGTTGGCAGAGCCATGGAT +
Preference number: 5 (lower is better)
Translates to: TLMPFRTALTCTAAFRILGGVRS*VGRAMD
Trigger: ATCCATGGCTCTGCCAACCAACGAACGCACTCCACC...CAGGATTCTGAAGGCAGCTGTGCAAGTTAAAGCTGTTCTGAATGGCATTAATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS-3UTR CAA 90 bp AAATGTAGTTCTATAAACCTCCTAGGATTGACGGAGATTGGCCATAACCAGCACGGTGGAGTGCGTTCGTaGGTTGGCAGAGCCATGGAT +
Preference number: 5 (lower is better)
Translates to: KCSSINLLGLTEIGHNQHGGVRS*VGRAMD
Trigger: ATCCATGGCTCTGCCAACCAACGAACGCACTCCACC...GTGCTGGTTATGGCCAATCTCCGTCAATCCTAGGAGGTTTATAGAACTACATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CAA 90 bp ATAATGATAAAAATCAGCTTGCATGAGGGTCGCAGTACATCTACTTTGAAGTTACATCCTGCTGCTTGCTaGGCGAGGGCTGGCTGTGGG +
Preference number: 5 (lower is better)
Translates to: IMIKISLHEGRSTSTLKLHPAAC*ARAGCG
Trigger: CCCACAGCCAGCCCTCGCCAAGCAAGCAGCAGGATG...TAACTTCAAAGTAGATGTACTGCGACCCTCATGCAAGCTGATTTTTATCATTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CAA 90 bp GAAAATATGATCAACAAAGCATGTGATAGCCTCTTCATTTATGCTTCCGGAAGCCAAACATCCTGCTGCTaGCTTGGCGAGGGCTGGCTG +
Preference number: 5 (lower is better)
Translates to: ENMINKACDSLFIYASGSQTSCC*LGEGWL
Trigger: CAGCCAGCCCTCGCCAAGCAAGCAGCAGGATGTTTG...GCTTCCGGAAGCATAAATGAAGAGGCTATCACATGCTTTGTTGATCATATTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CAA 90 bp ACATTAATGCCATTCAGAACAGCTTTAACTTGCACAGCTGCCTTCAGAATCCTGCCGCAGGAACCACCATaGGATCTCCAGATACACCGA +
Preference number: 5 (lower is better)
Translates to: TLMPFRTALTCTAAFRILPQEPP*DLQIHR
Trigger: TCGGTGTATCTGGAGATCCAATGGTGGTTCCTGCGG...CAGGATTCTGAAGGCAGCTGTGCAAGTTAAAGCTGTTCTGAATGGCATTAATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS-3UTR CAA 90 bp GAAAATATGATCAACAAAGCATGTGATAGCCTCTTCATTTATGCTTCCGGAAGCGCTGCGGAGACGTTCTaGCGGGGCTTCATATCCTGC +
Preference number: 5 (lower is better)
Translates to: ENMINKACDSLFIYASGSAAETF*RGFISC
Trigger: GCAGGATATGAAGCCCCGCAAGAACGTCTCCGCAGC...GCTTCCGGAAGCATAAATGAAGAGGCTATCACATGCTTTGTTGATCATATTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CAA 90 bp TGCAATGACCAAGGCATGCCAGGAGAGTTGCTCATCTACATTATAAGGCAGGGCGGCTACTCTGTAATCTaGCCTGTAGTGTCTAACTTC +
Preference number: 5 (lower is better)
Translates to: CNDQGMPGELLIYIIRQGGYSVI*PVVSNF
Trigger: GAAGTTAGACACTACAGGCAAGATTACAGAGTAGCC...GCCCTGCCTTATAATGTAGATGAGCAACTCTCCTGGCATGCCTTGGTCATTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS-3UTR CAA 90 bp GAAAATATGATCAACAAAGCATGTGATAGCCTCTTCATTTATGCTTCCGGAAGCTCTGCACACCAGGGGTaGATCCATGGCCAGGTTGGG +
Preference number: 5 (lower is better)
Translates to: ENMINKACDSLFIYASGSSAHQG*IHGQVG
Trigger: CCCAACCTGGCCATGGATCAACCCCTGGTGTGCAGA...GCTTCCGGAAGCATAAATGAAGAGGCTATCACATGCTTTGTTGATCATATTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404951.5
CDS-3UTR CAA 90 bp CAGTGTACATTCTTCACAGTCAAGAGACTCTCAAACCTCAATAAACACCATGTACAGGCGATTTGCTCTTaGCTGGAGGAGCCAGCACGC +
Preference number: 5 (lower is better)
Translates to: QCTFFTVKRLSNLNKHHVQAICS*LEEPAR
Trigger: GCGTGCTGGCTCCTCCAGCAAAGAGCAAATCGCCTG...TACATGGTGTTTATTGAGGTTTGAGAGTCTCTTGACTGTGAAGAATGTACACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404951.5
CDS-3UTR CAA 90 bp ACTTTCCAGAATGAAGCAGAGGACAATAGAGACCATCTGCAGCTGTCAAACCTGGGCCATAACCAGCACTaGCCACCATTGAACAAGAAC +
Preference number: 5 (lower is better)
Translates to: TFQNEAEDNRDHLQLSNLGHNQH*PPLNKN
Trigger: GTTCTTGTTCAATGGTGGCAAGTGCTGGTTATGGCC...CAGGTTTGACAGCTGCAGATGGTCTCTATTGTCCTCTGCTTCATTCTGGAAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CAA 90 bp GGGTCCTTTAGTAGGAAATTAGTGGTATCCATAGTAAATATTCCCTATCCTGATCAAACATCCTGCTGCTaGCTTGGCGAGGGCTGGCTG +
Preference number: 5 (lower is better)
Translates to: GSFSRKLVVSIVNIPYPDQTSCC*LGEGWL
Trigger: CAGCCAGCCCTCGCCAAGCAAGCAGCAGGATGTTTG...ATCAGGATAGGGAATATTTACTATGGATACCACTAATTTCCTACTAAAGGACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CAA 90 bp GGGTCCTTTAGTAGGAAATTAGTGGTATCCATAGTAAATATTCCCTATCCTGATTTCACTGTGCTGATCTaGGTCCCGTCGCTGTCCGGG +
Preference number: 5 (lower is better)
Translates to: GSFSRKLVVSIVNIPYPDFTVLI*VPSLSG
Trigger: CCCGGACAGCGACGGGACCAAGATCAGCACAGTGAA...ATCAGGATAGGGAATATTTACTATGGATACCACTAATTTCCTACTAAAGGACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CAA 90 bp AAATTAGTGGTATCCATAGTAAATATTCCCTATCCTGATGACATTCAGGCCAACTTCACTGTGCTGATCTaGGTCCCGTCGCTGTCCGGG +
Preference number: 5 (lower is better)
Translates to: KLVVSIVNIPYPDDIQANFTVLI*VPSLSG
Trigger: CCCGGACAGCGACGGGACCAAGATCAGCACAGTGAA...GTTGGCCTGAATGTCATCAGGATAGGGAATATTTACTATGGATACCACTAATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CAA 90 bp ACTTTCCAGAATGAAGCAGAGGACAATAGAGACCATCTGCAGCTGTCAAACCTGGGAGATGTCATTGCCTaGGACTTTCACTGTGCTGAT +
Preference number: 5 (lower is better)
Translates to: TFQNEAEDNRDHLQLSNLGDVIA*DFHCAD
Trigger: ATCAGCACAGTGAAAGTCCAAGGCAATGACATCTCC...CAGGTTTGACAGCTGCAGATGGTCTCTATTGTCCTCTGCTTCATTCTGGAAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CAA 90 bp CAGTGTACATTCTTCACAGTCAAGAGACTCTCAAACCTCAATAAACACCATGTAGAGTGCGTTCGTTGGTaGGCAGAGCCATGGATGCTG +
Preference number: 5 (lower is better)
Translates to: QCTFFTVKRLSNLNKHHVECVRW*AEPWML
Trigger: CAGCATCCATGGCTCTGCCAACCAACGAACGCACTC...TACATGGTGTTTATTGAGGTTTGAGAGTCTCTTGACTGTGAAGAATGTACACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS TCA 90 bp GAGAGAAGAAAGGAAGGACTAGTAGAGGTGGTCTGTGGAGATGTTTaGCTTCTGGAAGGATTGGAGACACTGATTGTGGACTTTGTTTGG +
Preference number: 5 (lower is better)
Translates to: ERRKEGLVEVVCGDV*LLEGLETLIVDFVW
Trigger: CCAAACAAAGTCCACAATCAGTGTCTCCAATCCTTCCAGAAGTCAAACATCTCCACAGACCACCTCTACTAGTCCTTCCTTTCTTCTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404951.5
CDS-3UTR CAA 90 bp ACATTAATGCCATTCAGAACAGCTTTAACTTGCACAGCTGCCTTCAGAATCCTGTGTGGGGAGAAGGGATaGCGATTCTGGAAGGTTAGA +
Preference number: 5 (lower is better)
Translates to: TLMPFRTALTCTAAFRILCGEKG*RFWKVR
Trigger: TCTAACCTTCCAGAATCGCAATCCCTTCTCCCCACA...CAGGATTCTGAAGGCAGCTGTGCAAGTTAAAGCTGTTCTGAATGGCATTAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS-3UTR CAA 90 bp ATAATGATAAAAATCAGCTTGCATGAGGGTCGCAGTACATCTACTTTGAAGTTACAAACATCCTGCTGCTaGCTTGGCGAGGGCTGGCTG +
Preference number: 5 (lower is better)
Translates to: IMIKISLHEGRSTSTLKLQTSCC*LGEGWL
Trigger: CAGCCAGCCCTCGCCAAGCAAGCAGCAGGATGTTTG...TAACTTCAAAGTAGATGTACTGCGACCCTCATGCAAGCTGATTTTTATCATTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CAA 90 bp GTACATTCTTCACAGTCAAGAGACTCTCAAACCTCAATAAACACCATGTATAAAGCTGCGGAGACGTTCTaGCGGGGCTTCATATCCTGC +
Preference number: 5 (lower is better)
Translates to: VHSSQSRDSQTSINTMYKAAETF*RGFISC
Trigger: GCAGGATATGAAGCCCCGCAAGAACGTCTCCGCAGC...TTTATACATGGTGTTTATTGAGGTTTGAGAGTCTCTTGACTGTGAAGAATGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CAA 90 bp ATAATGATAAAAATCAGCTTGCATGAGGGTCGCAGTACATCTACTTTGAAGTTAGCTGCGGAGACGTTCTaGCGGGGCTTCATATCCTGC +
Preference number: 5 (lower is better)
Translates to: IMIKISLHEGRSTSTLKLAAETF*RGFISC
Trigger: GCAGGATATGAAGCCCCGCAAGAACGTCTCCGCAGC...TAACTTCAAAGTAGATGTACTGCGACCCTCATGCAAGCTGATTTTTATCATTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CAA 90 bp CTACATTATAAGGCAGGGCAAACTCAGAGAACCCTAATCCAAGTGCCCTACAAAACAAATCCACACACATaGGGCTTCAGAGAGGCTAAG +
Preference number: 5 (lower is better)
Translates to: LHYKAGQTQRTLIQVPYKTNPHT*GFREAK
Trigger: CTTAGCCTCTCTGAAGCCCAATGTGTGTGGATTTGT...TTTGTAGGGCACTTGGATTAGGGTTCTCTGAGTTTGCCCTGCCTTATAATGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS-3UTR CAA 90 bp GAATATGCACTTTCCAGAATGAAGCAGAGGACAATAGAGACCATCTGCAGCTGTCCTTTTGATCTCTGTTaGCTTCCTGAAGATGCTGGG +
Preference number: 5 (lower is better)
Translates to: EYALSRMKQRTIETICSCPFDLC*LPEDAG
Trigger: CCCAGCATCTTCAGGAAGCAAACAGAGATCAAAAGG...ACAGCTGCAGATGGTCTCTATTGTCCTCTGCTTCATTCTGGAAAGTGCATATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CAA 90 bp CTCCTAGGATTGACGGAGATTGGCCATAACCAGCACTTGCCACCATTGAACAAGAAAGTAATGTCCTCCTaGTTGACTTGCAGTGTTGAT +
Preference number: 5 (lower is better)
Translates to: LLGLTEIGHNQHLPPLNKKVMSS*LTCSVD
Trigger: ATCAACACTGCAAGTCAACAAGGAGGACATTACTTT...CTTGTTCAATGGTGGCAAGTGCTGGTTATGGCCAATCTCCGTCAATCCTAGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CAA 90 bp TTTGCTGTCCGCTCCGTAGATTTTACAGGCGATTTGCTCTTTGCTTTAAGAAGAGGCCATAACCAGCACTaGCCACCATTGAACAAGAAC +
Preference number: 5 (lower is better)
Translates to: FAVRSVDFTGDLLFALRRGHNQH*PPLNKN
Trigger: GTTCTTGTTCAATGGTGGCAAGTGCTGGTTATGGCC...TCTTCTTAAAGCAAAGAGCAAATCGCCTGTAAAATCTACGGAGCGGACAGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407838.7
CDS-3UTR CAA 90 bp AACATGAATTTAGGGAATTATGGTGAGTGCTTCACCTTCCCCACATTCGCCTCCATAAACCTCCTAGGATaGACGGAGATTGGCCATAAC +
Preference number: 5 (lower is better)
Translates to: NMNLGNYGECFTFPTFASINLLG*TEIGHN
Trigger: GTTATGGCCAATCTCCGTCAATCCTAGGAGGTTTAT...GGAGGCGAATGTGGGGAAGGTGAAGCACTCACCATAATTCCCTAAATTCATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CAA 90 bp GGAATTATGGTGAGTGCTTCACCTTCCCCACATTCGCCTCCTAGGCAAATTTTCATGATAAAAATCAGCTaGCATGAGGGTCGCAGTACA +
Preference number: 5 (lower is better)
Translates to: GIMVSASPSPHSPPRQIFMIKIS*HEGRST
Trigger: TGTACTGCGACCCTCATGCAAGCTGATTTTTATCAT...GAAAATTTGCCTAGGAGGCGAATGTGGGGAAGGTGAAGCACTCACCATAATTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS TCA 90 bp CTGCACTCATATAAGCCTTCATCCTTTTTCCTCACTTTGGAAATCTaGAGCTTGTGGGAGATGTCATTGCCTTGGACTTTCACTGTGCTG +
Preference number: 5 (lower is better)
Translates to: LHSYKPSSFFLTLEI*SLWEMSLPWTFTVL
Trigger: CAGCACAGTGAAAGTCCAAGGCAATGACATCTCCCACAAGCTTCAGATTTCCAAAGTGAGGAAAAAGGATGAAGGCTTATATGAGTGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000302287.7
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
ENST00000466888.5
ENST00000469952.1
ENST00000498834.5
CDS-3UTR CAA 90 bp AAATTAGTGGTATCCATAGTAAATATTCCCTATCCTGATGACATTCAGGCCAACCCGCAGGAACCACCATaGGATCTCCAGATACACCGA +
Preference number: 5 (lower is better)
Translates to: KLVVSIVNIPYPDDIQANPQEPP*DLQIHR
Trigger: TCGGTGTATCTGGAGATCCAATGGTGGTTCCTGCGG...GTTGGCCTGAATGTCATCAGGATAGGGAATATTTACTATGGATACCACTAATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CAA 90 bp AAATGTAGTTCTATAAACCTCCTAGGATTGACGGAGATTGGCCATAACCAGCACGGAGATGTCATTGCCTaGGACTTTCACTGTGCTGAT +
Preference number: 5 (lower is better)
Translates to: KCSSINLLGLTEIGHNQHGDVIA*DFHCAD
Trigger: ATCAGCACAGTGAAAGTCCAAGGCAATGACATCTCC...GTGCTGGTTATGGCCAATCTCCGTCAATCCTAGGAGGTTTATAGAACTACATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CAA 90 bp GGGACCTGCCATCATCTTTTGCATATTGTATTTAGCCAACAACCAAATTTTAATGAGTGCGTTCGTTGGTaGGCAGAGCCATGGATGCTG +
Preference number: 5 (lower is better)
Translates to: GTCHHLLHIVFSQQPNFNECVRW*AEPWML
Trigger: CAGCATCCATGGCTCTGCCAACCAACGAACGCACTC...ATTAAAATTTGGTTGTTGGCTAAATACAATATGCAAAAGATGATGGCAGGTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402613.4
ENST00000407838.7
CDS-3UTR CAA 90 bp AAAACCAGACAGTGTACATTCTTCACAGTCAAGAGACTCTCAAACCTCAATAAAGATTTTGGCTACCACTaGAGGGCTGGAGGTGGAGTG +
Preference number: 5 (lower is better)
Translates to: KTRQCTFFTVKRLSNLNKDFGYH*RAGGGV
Trigger: CACTCCACCTCCAGCCCTCAAGTGGTAGCCAAAATC...TTTATTGAGGTTTGAGAGTCTCTTGACTGTGAAGAATGTACACTGTCTGGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CAA 90 bp TACAATTTTGAATATGCACTTTCCAGAATGAAGCAGAGGACAATAGAGACCATCGATTTTGGCTACCACTaGAGGGCTGGAGGTGGAGTG +
Preference number: 5 (lower is better)
Translates to: YNFEYALSRMKQRTIETIDFGYH*RAGGGV
Trigger: CACTCCACCTCCAGCCCTCAAGTGGTAGCCAAAATC...GATGGTCTCTATTGTCCTCTGCTTCATTCTGGAAAGTGCATATTCAAAATTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CAA 90 bp CACACATTGGGCTTCAGAGAGGCTAAGCCATCTGTTCATCAGACTGACATAAATGATTGTGGACTTTGTTaGGGGATTTTGGCTACCACT +
Preference number: 5 (lower is better)
Translates to: HTLGFREAKPSVHQTDINDCGLC*GILATT
Trigger: AGTGGTAGCCAAAATCCCCAAACAAAGTCCACAATC...ATTTATGTCAGTCTGATGAACAGATGGCTTAGCCTCTCTGAAGCCCAATGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS-3UTR CAA 90 bp GAATATGCACTTTCCAGAATGAAGCAGAGGACAATAGAGACCATCTGCAGCTGTGATTGTGGACTTTGTTaGGGGATTTTGGCTACCACT +
Preference number: 5 (lower is better)
Translates to: EYALSRMKQRTIETICSCDCGLC*GILATT
Trigger: AGTGGTAGCCAAAATCCCCAAACAAAGTCCACAATC...ACAGCTGCAGATGGTCTCTATTGTCCTCTGCTTCATTCTGGAAAGTGCATATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CAA 90 bp ACTTTCCAGAATGAAGCAGAGGACAATAGAGACCATCTGCAGCTGTCAAACCTGATGATAAAAATCAGCTaGCATGAGGGTCGCAGTACA +
Preference number: 5 (lower is better)
Translates to: TFQNEAEDNRDHLQLSNLMIKIS*HEGRST
Trigger: TGTACTGCGACCCTCATGCAAGCTGATTTTTATCAT...CAGGTTTGACAGCTGCAGATGGTCTCTATTGTCCTCTGCTTCATTCTGGAAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CAA 90 bp ACTTTCCAGAATGAAGCAGAGGACAATAGAGACCATCTGCAGCTGTCAAACCTGGATTTTACAGGCGATTaGCTCTTTGCTGATTGTGGA +
Preference number: 5 (lower is better)
Translates to: TFQNEAEDNRDHLQLSNLDFTGD*LFADCG
Trigger: TCCACAATCAGCAAAGAGCAAATCGCCTGTAAAATC...CAGGTTTGACAGCTGCAGATGGTCTCTATTGTCCTCTGCTTCATTCTGGAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402613.4
CDS-3UTR CAA 90 bp GAATATGCACTTTCCAGAATGAAGCAGAGGACAATAGAGACCATCTGCAGCTGTCTCGGTAAATTTTGCTaGAGAAGAAAGCCCTTGTTG +
Preference number: 5 (lower is better)
Translates to: EYALSRMKQRTIETICSCLGKFC*RRKPLL
Trigger: CAACAAGGGCTTTCTTCTCAAGCAAAATTTACCGAG...ACAGCTGCAGATGGTCTCTATTGTCCTCTGCTTCATTCTGGAAAGTGCATATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CAA 90 bp GTACATTCTTCACAGTCAAGAGACTCTCAAACCTCAATAAACACCATGTATAAACCGCAGGAACCACCATaGGATCTCCAGATACACCGA +
Preference number: 5 (lower is better)
Translates to: VHSSQSRDSQTSINTMYKPQEPP*DLQIHR
Trigger: TCGGTGTATCTGGAGATCCAATGGTGGTTCCTGCGG...TTTATACATGGTGTTTATTGAGGTTTGAGAGTCTCTTGACTGTGAAGAATGTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CAA 90 bp TTACACATAAGTAAAGTGAGTGACTGGACTGCCCCAGCTTCTGAAATCGAAATTTTGTGGGAGATGTCATaGCCTTGGACTTTCACTGTG +
Preference number: 5 (lower is better)
Translates to: LHISKVSDWTAPASEIEILWEMS*PWTFTV
Trigger: CACAGTGAAAGTCCAAGGCAATGACATCTCCCACAA...AATTTCGATTTCAGAAGCTGGGGCAGTCCAGTCACTCACTTTACTTATGTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS-3UTR CAA 90 bp AAATTAGTGGTATCCATAGTAAATATTCCCTATCCTGATGACATTCAGGCCAACGGTGCAGGGTGGTGCTaGGAGTTTAGGGTCAACTTT +
Preference number: 5 (lower is better)
Translates to: KLVVSIVNIPYPDDIQANGAGWC*EFRVNF
Trigger: AAAGTTGACCCTAAACTCCAAGCACCACCCTGCACC...GTTGGCCTGAATGTCATCAGGATAGGGAATATTTACTATGGATACCACTAATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CAA 90 bp AAATGTTCTAACATGAATTTAGGGAATTATGGTGAGTGCTTCACCTTCCCCACAGGAAGCAGGCGCTCCTaGTGTAGTGAATTAGAGTAC +
Preference number: 5 (lower is better)
Translates to: KCSNMNLGNYGECFTFPTGSRRS*CSELEY
Trigger: GTACTCTAATTCACTACACAAGGAGCGCCTGCTTCC...TGTGGGGAAGGTGAAGCACTCACCATAATTCCCTAAATTCATGTTAGAACATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CAA 90 bp GAGATTGGCCATAACCAGCACTTGCCACCATTGAACAAGAACTGTAATCAAGAAATAAACCTCCTAGGATaGACGGAGATTGGCCATAAC +
Preference number: 5 (lower is better)
Translates to: EIGHNQHLPPLNKNCNQEINLLG*TEIGHN
Trigger: GTTATGGCCAATCTCCGTCAATCCTAGGAGGTTTAT...TTCTTGATTACAGTTCTTGTTCAATGGTGGCAAGTGCTGGTTATGGCCAATCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CAA 90 bp GGAATTATGGTGAGTGCTTCACCTTCCCCACATTCGCCTCCTAGGCAAATTTTCACCTGCCATCATCTTTaGCATATTGTATTTAGCCAA +
Preference number: 5 (lower is better)
Translates to: GIMVSASPSPHSPPRQIFTCHHL*HIVFSQ
Trigger: TTGGCTAAATACAATATGCAAAAGATGATGGCAGGT...GAAAATTTGCCTAGGAGGCGAATGTGGGGAAGGTGAAGCACTCACCATAATTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402613.4
ENST00000407838.7
CDS-3UTR CAA 90 bp AAATTAGTGGTATCCATAGTAAATATTCCCTATCCTGATGACATTCAGGCCAACTGTGGGGAGAAGGGATaGCGATTCTGGAAGGTTAGA +
Preference number: 5 (lower is better)
Translates to: KLVVSIVNIPYPDDIQANCGEKG*RFWKVR
Trigger: TCTAACCTTCCAGAATCGCAATCCCTTCTCCCCACA...GTTGGCCTGAATGTCATCAGGATAGGGAATATTTACTATGGATACCACTAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CAA 90 bp CAGTGTACATTCTTCACAGTCAAGAGACTCTCAAACCTCAATAAACACCATGTAGGTCTGTGGAGATGTTaGACTTCTGGAAGGATTGGA +
Preference number: 5 (lower is better)
Translates to: QCTFFTVKRLSNLNKHHVGLWRC*TSGRIG
Trigger: TCCAATCCTTCCAGAAGTCAAACATCTCCACAGACC...TACATGGTGTTTATTGAGGTTTGAGAGTCTCTTGACTGTGAAGAATGTACACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404951.5
CDS-3UTR CAA 90 bp AAAACCAGACAGTGTACATTCTTCACAGTCAAGAGACTCTCAAACCTCAATAAAGGAAGCAGGCGCTCCTaGTGTAGTGAATTAGAGTAC +
Preference number: 5 (lower is better)
Translates to: KTRQCTFFTVKRLSNLNKGSRRS*CSELEY
Trigger: GTACTCTAATTCACTACACAAGGAGCGCCTGCTTCC...TTTATTGAGGTTTGAGAGTCTCTTGACTGTGAAGAATGTACACTGTCTGGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CAA 90 bp AAATTAGTGGTATCCATAGTAAATATTCCCTATCCTGATGACATTCAGGCCAACGGAAGCAGGCGCTCCTaGTGTAGTGAATTAGAGTAC +
Preference number: 5 (lower is better)
Translates to: KLVVSIVNIPYPDDIQANGSRRS*CSELEY
Trigger: GTACTCTAATTCACTACACAAGGAGCGCCTGCTTCC...GTTGGCCTGAATGTCATCAGGATAGGGAATATTTACTATGGATACCACTAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CAA 90 bp CAGTGTACATTCTTCACAGTCAAGAGACTCTCAAACCTCAATAAACACCATGTACCTTTTGATCTCTGTTaGCTTCCTGAAGATGCTGGG +
Preference number: 5 (lower is better)
Translates to: QCTFFTVKRLSNLNKHHVPFDLC*LPEDAG
Trigger: CCCAGCATCTTCAGGAAGCAAACAGAGATCAAAAGG...TACATGGTGTTTATTGAGGTTTGAGAGTCTCTTGACTGTGAAGAATGTACACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CAA 90 bp AAATGTAGTTCTATAAACCTCCTAGGATTGACGGAGATTGGCCATAACCAGCACGTAATGTCCTCCTTGTaGACTTGCAGTGTTGATAGT +
Preference number: 5 (lower is better)
Translates to: KCSSINLLGLTEIGHNQHVMSSL*TCSVDS
Trigger: ACTATCAACACTGCAAGTCAACAAGGAGGACATTAC...GTGCTGGTTATGGCCAATCTCCGTCAATCCTAGGAGGTTTATAGAACTACATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CAA 90 bp AAATGTAGTTCTATAAACCTCCTAGGATTGACGGAGATTGGCCATAACCAGCACATGATAAAAATCAGCTaGCATGAGGGTCGCAGTACA +
Preference number: 5 (lower is better)
Translates to: KCSSINLLGLTEIGHNQHMIKIS*HEGRST
Trigger: TGTACTGCGACCCTCATGCAAGCTGATTTTTATCAT...GTGCTGGTTATGGCCAATCTCCGTCAATCCTAGGAGGTTTATAGAACTACATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS GCA 90 bp ACTGCATACATTAATGCCATTCAGAACAGCTTTAACTTGCACAGCTaGCTTCAGAATCCTGTGACTAAGCTTCTAAATTGGCCTGATTGT +
Preference number: 5 (lower is better)
Translates to: TAYINAIQNSFNLHS*LQNPVTKLLNWPDC
Trigger: ACAATCAGGCCAATTTAGAAGCTTAGTCACAGGATTCTGAAGGCAGCTGTGCAAGTTAAAGCTGTTCTGAATGGCATTAATGTATGCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469952.1
CDS-3UTR CAA 90 bp TTACACATAAGTAAAGTGAGTGACTGGACTGCCCCAGCTTCTGAAATCGAAATTCTCGGTAAATTTTGCTaGAGAAGAAAGCCCTTGTTG +
Preference number: 5 (lower is better)
Translates to: LHISKVSDWTAPASEIEILGKFC*RRKPLL
Trigger: CAACAAGGGCTTTCTTCTCAAGCAAAATTTACCGAG...AATTTCGATTTCAGAAGCTGGGGCAGTCCAGTCACTCACTTTACTTATGTGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS-3UTR CAA 90 bp AAATTAGTGGTATCCATAGTAAATATTCCCTATCCTGATGACATTCAGGCCAACGGAGATGTCATTGCCTaGGACTTTCACTGTGCTGAT +
Preference number: 5 (lower is better)
Translates to: KLVVSIVNIPYPDDIQANGDVIA*DFHCAD
Trigger: ATCAGCACAGTGAAAGTCCAAGGCAATGACATCTCC...GTTGGCCTGAATGTCATCAGGATAGGGAATATTTACTATGGATACCACTAATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CAA 90 bp GGGTCCTTTAGTAGGAAATTAGTGGTATCCATAGTAAATATTCCCTATCCTGATTTGTGGGAGATGTCATaGCCTTGGACTTTCACTGTG +
Preference number: 5 (lower is better)
Translates to: GSFSRKLVVSIVNIPYPDLWEMS*PWTFTV
Trigger: CACAGTGAAAGTCCAAGGCAATGACATCTCCCACAA...ATCAGGATAGGGAATATTTACTATGGATACCACTAATTTCCTACTAAAGGACCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CAA 90 bp CAGTGTACATTCTTCACAGTCAAGAGACTCTCAAACCTCAATAAACACCATGTAGATTGTGGACTTTGTTaGGGGATTTTGGCTACCACT +
Preference number: 5 (lower is better)
Translates to: QCTFFTVKRLSNLNKHHVDCGLC*GILATT
Trigger: AGTGGTAGCCAAAATCCCCAAACAAAGTCCACAATC...TACATGGTGTTTATTGAGGTTTGAGAGTCTCTTGACTGTGAAGAATGTACACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CAA 90 bp AAATGTTCTAACATGAATTTAGGGAATTATGGTGAGTGCTTCACCTTCCCCACAGATTGTGGACTTTGTTaGGGGATTTTGGCTACCACT +
Preference number: 5 (lower is better)
Translates to: KCSNMNLGNYGECFTFPTDCGLC*GILATT
Trigger: AGTGGTAGCCAAAATCCCCAAACAAAGTCCACAATC...TGTGGGGAAGGTGAAGCACTCACCATAATTCCCTAAATTCATGTTAGAACATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CAA 90 bp CACACATTGGGCTTCAGAGAGGCTAAGCCATCTGTTCATCAGACTGACATAAATTCCAGCTATACTAGTTaGTCCTTTAATTTGGTAAGC +
Preference number: 5 (lower is better)
Translates to: HTLGFREAKPSVHQTDINSSYTS*SFNLVS
Trigger: GCTTACCAAATTAAAGGACAAACTAGTATAGCTGGA...ATTTATGTCAGTCTGATGAACAGATGGCTTAGCCTCTCTGAAGCCCAATGTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS-3UTR CAA 90 bp CTACATTATAAGGCAGGGCAAACTCAGAGAACCCTAATCCAAGTGCCCTACAAATTTCACTTCCATGATTaGGAGTTCTTGCTAATTAGG +
Preference number: 5 (lower is better)
Translates to: LHYKAGQTQRTLIQVPYKFHFHD*EFLLIR
Trigger: CCTAATTAGCAAGAACTCCAAATCATGGAAGTGAAA...TTTGTAGGGCACTTGGATTAGGGTTCTCTGAGTTTGCCCTGCCTTATAATGTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS-3UTR CAA 90 bp ACATTAATGCCATTCAGAACAGCTTTAACTTGCACAGCTGCCTTCAGAATCCTGATTCTGCCGAACAGATaGATGACATCTAACTTGGAA +
Preference number: 5 (lower is better)
Translates to: TLMPFRTALTCTAAFRILILPNR*MTSNLE
Trigger: TTCCAAGTTAGATGTCATCAATCTGTTCGGCAGAAT...CAGGATTCTGAAGGCAGCTGTGCAAGTTAAAGCTGTTCTGAATGGCATTAATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS-3UTR CAA 90 bp GGGACCTGCCATCATCTTTTGCATATTGTATTTAGCCAACAACCAAATTTTAATGGCCATAACCAGCACTaGCCACCATTGAACAAGAAC +
Preference number: 5 (lower is better)
Translates to: GTCHHLLHIVFSQQPNFNGHNQH*PPLNKN
Trigger: GTTCTTGTTCAATGGTGGCAAGTGCTGGTTATGGCC...ATTAAAATTTGGTTGTTGGCTAAATACAATATGCAAAAGATGATGGCAGGTCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402613.4
ENST00000407838.7
CDS-3UTR CAA 90 bp GAAAATATGATCAACAAAGCATGTGATAGCCTCTTCATTTATGCTTCCGGAAGCATAAACCTCCTAGGATaGACGGAGATTGGCCATAAC +
Preference number: 5 (lower is better)
Translates to: ENMINKACDSLFIYASGSINLLG*TEIGHN
Trigger: GTTATGGCCAATCTCCGTCAATCCTAGGAGGTTTAT...GCTTCCGGAAGCATAAATGAAGAGGCTATCACATGCTTTGTTGATCATATTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CAA 90 bp ATAATGATAAAAATCAGCTTGCATGAGGGTCGCAGTACATCTACTTTGAAGTTATTGTGGGAGATGTCATaGCCTTGGACTTTCACTGTG +
Preference number: 5 (lower is better)
Translates to: IMIKISLHEGRSTSTLKLLWEMS*PWTFTV
Trigger: CACAGTGAAAGTCCAAGGCAATGACATCTCCCACAA...TAACTTCAAAGTAGATGTACTGCGACCCTCATGCAAGCTGATTTTTATCATTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CAA 90 bp GTACATTCTTCACAGTCAAGAGACTCTCAAACCTCAATAAACACCATGTATAAATTGTGGGAGATGTCATaGCCTTGGACTTTCACTGTG +
Preference number: 5 (lower is better)
Translates to: VHSSQSRDSQTSINTMYKLWEMS*PWTFTV
Trigger: CACAGTGAAAGTCCAAGGCAATGACATCTCCCACAA...TTTATACATGGTGTTTATTGAGGTTTGAGAGTCTCTTGACTGTGAAGAATGTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CAA 90 bp GAAAATATGATCAACAAAGCATGTGATAGCCTCTTCATTTATGCTTCCGGAAGCCCTAAAAAGGGGGTTTaGTCTGATGATAGCTTCTGT +
Preference number: 5 (lower is better)
Translates to: ENMINKACDSLFIYASGSPKKGV*SDDSFC
Trigger: ACAGAAGCTATCATCAGACAAAACCCCCTTTTTAGG...GCTTCCGGAAGCATAAATGAAGAGGCTATCACATGCTTTGTTGATCATATTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CAA 90 bp CAGTGTACATTCTTCACAGTCAAGAGACTCTCAAACCTCAATAAACACCATGTACCTAAAAAGGGGGTTTaGTCTGATGATAGCTTCTGT +
Preference number: 5 (lower is better)
Translates to: QCTFFTVKRLSNLNKHHVPKKGV*SDDSFC
Trigger: ACAGAAGCTATCATCAGACAAAACCCCCTTTTTAGG...TACATGGTGTTTATTGAGGTTTGAGAGTCTCTTGACTGTGAAGAATGTACACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CAA 90 bp GAAAATATGATCAACAAAGCATGTGATAGCCTCTTCATTTATGCTTCCGGAAGCGTAATGTCCTCCTTGTaGACTTGCAGTGTTGATAGT +
Preference number: 5 (lower is better)
Translates to: ENMINKACDSLFIYASGSVMSSL*TCSVDS
Trigger: ACTATCAACACTGCAAGTCAACAAGGAGGACATTAC...GCTTCCGGAAGCATAAATGAAGAGGCTATCACATGCTTTGTTGATCATATTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CAA 90 bp GAGATTGGCCATAACCAGCACTTGCCACCATTGAACAAGAACTGTAATCAAGAAACCTGCCATCATCTTTaGCATATTGTATTTAGCCAA +
Preference number: 5 (lower is better)
Translates to: EIGHNQHLPPLNKNCNQETCHHL*HIVFSQ
Trigger: TTGGCTAAATACAATATGCAAAAGATGATGGCAGGT...TTCTTGATTACAGTTCTTGTTCAATGGTGGCAAGTGCTGGTTATGGCCAATCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402613.4
ENST00000407838.7
CDS-3UTR CAA 90 bp GGGTCCTTTAGTAGGAAATTAGTGGTATCCATAGTAAATATTCCCTATCCTGATCAGGCGATTTGCTCTTaGCTGATTGTGGACTTTGTT +
Preference number: 5 (lower is better)
Translates to: GSFSRKLVVSIVNIPYPDQAICS*LIVDFV
Trigger: AACAAAGTCCACAATCAGCAAAGAGCAAATCGCCTG...ATCAGGATAGGGAATATTTACTATGGATACCACTAATTTCCTACTAAAGGACCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402613.4
CDS-3UTR CAA 90 bp AAATTAGTGGTATCCATAGTAAATATTCCCTATCCTGATGACATTCAGGCCAACCTCGGTAAATTTTGCTaGAGAAGAAAGCCCTTGTTG +
Preference number: 5 (lower is better)
Translates to: KLVVSIVNIPYPDDIQANLGKFC*RRKPLL
Trigger: CAACAAGGGCTTTCTTCTCAAGCAAAATTTACCGAG...GTTGGCCTGAATGTCATCAGGATAGGGAATATTTACTATGGATACCACTAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CAA 90 bp TTACACATAAGTAAAGTGAGTGACTGGACTGCCCCAGCTTCTGAAATCGAAATTCATTTCATTCTACCCTaGGAATTCTTCACTTGGAAT +
Preference number: 5 (lower is better)
Translates to: LHISKVSDWTAPASEIEIHFILP*EFFTWN
Trigger: ATTCCAAGTGAAGAATTCCAAGGGTAGAATGAAATG...AATTTCGATTTCAGAAGCTGGGGCAGTCCAGTCACTCACTTTACTTATGTGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS-3UTR CAA 90 bp GGGTCCTTTAGTAGGAAATTAGTGGTATCCATAGTAAATATTCCCTATCCTGATCCTAAAAAGGGGGTTTaGTCTGATGATAGCTTCTGT +
Preference number: 5 (lower is better)
Translates to: GSFSRKLVVSIVNIPYPDPKKGV*SDDSFC
Trigger: ACAGAAGCTATCATCAGACAAAACCCCCTTTTTAGG...ATCAGGATAGGGAATATTTACTATGGATACCACTAATTTCCTACTAAAGGACCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CAA 90 bp ATAATGATAAAAATCAGCTTGCATGAGGGTCGCAGTACATCTACTTTGAAGTTAGTAATGTCCTCCTTGTaGACTTGCAGTGTTGATAGT +
Preference number: 5 (lower is better)
Translates to: IMIKISLHEGRSTSTLKLVMSSL*TCSVDS
Trigger: ACTATCAACACTGCAAGTCAACAAGGAGGACATTAC...TAACTTCAAAGTAGATGTACTGCGACCCTCATGCAAGCTGATTTTTATCATTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CAA 90 bp AAAACCAGACAGTGTACATTCTTCACAGTCAAGAGACTCTCAAACCTCAATAAAAAAGTAATGTCCTCCTaGTTGACTTGCAGTGTTGAT +
Preference number: 5 (lower is better)
Translates to: KTRQCTFFTVKRLSNLNKKVMSS*LTCSVD
Trigger: ATCAACACTGCAAGTCAACAAGGAGGACATTACTTT...TTTATTGAGGTTTGAGAGTCTCTTGACTGTGAAGAATGTACACTGTCTGGTTTT
38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
CDS-3UTR CAA 90 bp GGGACCTGCCATCATCTTTTGCATATTGTATTTAGCCAACAACCAAATTTTAATGATTTTACAGGCGATTaGCTCTTTGCTTTAAGAAGA +
Preference number: 5 (lower is better)
Translates to: GTCHHLLHIVFSQQPNFNDFTGD*LFALRR
Trigger: TCTTCTTAAAGCAAAGAGCAAATCGCCTGTAAAATC...ATTAAAATTTGGTTGTTGGCTAAATACAATATGCAAAAGATGATGGCAGGTCCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000407838.7
CDS CAA 72 bp CCGCGGCCCTTGGCGCGCCCCGCACTCACGCTGATCTaGGTCCCGTCGCTGTCCGGGTCTCTGTCGGGCAAG +
Preference number: 6 (lower is better)
Translates to: PRPLARPALTLI*VPSLSGSLSGK
Trigger: CTTGCCCGACAGAGACCCGGACAGCGACGGGACCAAGATCAGCGTGAGTGCGGGGCGCGCCAAGGGCCGCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495904.1
CDS GCA 72 bp GAGGCAAGCAAGGGGCACCCGGCTGTCCGGCTGTCCTaGAGCGCTGGCAAGCCGCCTTCTCGGGGACAGGGA +
Preference number: 6 (lower is better)
Translates to: EASKGHPAVRLS*SAGKPPSRGQG
Trigger: TCCCTGTCCCCGAGAAGGCGGCTTGCCAGCGCTGCAGGACAGCCGGACAGCCGGGTGCCCCTTGCTTGCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495904.1
CDS CCA 72 bp CAAGGGGCACCCGGCTGTCCGGCTGTCCTGCAGCGCTaGCAAGCCGCCTTCTCGGGGACAGGGAAGGGCTGT +
Preference number: 6 (lower is better)
Translates to: QGAPGCPAVLQR*QAAFSGTGKGC
Trigger: ACAGCCCTTCCCTGTCCCCGAGAAGGCGGCTTGCCAGCGCTGCAGGACAGCCGGACAGCCGGGTGCCCCTTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495904.1
CDS TCA 72 bp AGCTCGTCCAACGTCAGCCCGCCGCTCCGGCTTGCGTaGTCACTGCCCTCCCTAAACACGGAGCCGGCTCGG +
Preference number: 6 (lower is better)
Translates to: SSSNVSPPLRLA*SLPSLNTEPAR
Trigger: CCGAGCCGGCTCCGTGTTTAGGGAGGGCAGTGATCACGCAAGCCGGAGCGGCGGGCTGACGTTGGACGAGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302287.7
ENST00000402613.4
ENST00000407838.7
ENST00000495904.1
CDS GCA 72 bp TGGCAGCTCGTCCAACGTCAGCCCGCCGCTCCGGCTTaGGTGATCACTGCCCTCCCTAAACACGGAGCCGGC +
Preference number: 6 (lower is better)
Translates to: WQLVQRQPAAPA*VITALPKHGAG
Trigger: GCCGGCTCCGTGTTTAGGGAGGGCAGTGATCACGCAAGCCGGAGCGGCGGGCTGACGTTGGACGAGCTGCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302287.7
ENST00000402613.4
ENST00000407838.7
ENST00000495904.1
CDS CCA 72 bp GTGTCTCGGCTGCCTGGCTGCCTGCTTTCAGCTACCTaGCAGCTCGTCCAACGTCAGCCCGCCGCTCCGGCT +
Preference number: 6 (lower is better)
Translates to: VSRLPGCLLSAT*QLVQRQPAAPA
Trigger: AGCCGGAGCGGCGGGCTGACGTTGGACGAGCTGCCAGGTAGCTGAAAGCAGGCAGCCAGGCAGCCGAGACAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302287.7
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
ENST00000495904.1
CDS CCA 72 bp GCTGGGATTCAGCGAGGCTTCCTGCGGAGCCCAGGCTaGAATCGCTGGGAAGTGTCTCGGCTGCCTGGCTGC +
Preference number: 6 (lower is better)
Translates to: AGIQRGFLRSPG*NRWEVSRLPGC
Trigger: GCAGCCAGGCAGCCGAGACACTTCCCAGCGATTCCAGCCTGGGCTCCGCAGGAAGCCTCGCTGAATCCCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302287.7
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
ENST00000495904.1
CDS GCA 72 bp GGAGCCCAGGCTGGAATCGCTGGGAAGTGTCTCGGCTaGCTGGCTGCCTGCTTTCAGCTACCTGGCAGCTCG +
Preference number: 6 (lower is better)
Translates to: GAQAGIAGKCLG*LAACFQLPGSS
Trigger: CGAGCTGCCAGGTAGCTGAAAGCAGGCAGCCAGGCAGCCGAGACACTTCCCAGCGATTCCAGCCTGGGCTCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302287.7
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
ENST00000495904.1
CDS GCA 72 bp CTCAGAGCCCTGGGCGCGACACTGCAAACATCCTGCTaGTTGCTTGGCGAGGGCTGGCTGTGGGGAGAAGGG +
Preference number: 6 (lower is better)
Translates to: LRALGATLQTSC*LLGEGWLWGEG
Trigger: CCCTTCTCCCCACAGCCAGCCCTCGCCAAGCAAGCAGCAGGATGTTTGCAGTGTCGCGCCCAGGGCTCTGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302287.7
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
ENST00000495904.1
CDS GCA 72 bp GAGCCGCTCTGGAAGGCGCAGGACATCTCCACATTCTaGCCCTCGGTCGCCGTCACGTTCCGCGGAAACTCG +
Preference number: 6 (lower is better)
Translates to: EPLWKAQDISTF*PSVAVTFRGNS
Trigger: CGAGTTTCCGCGGAACGTGACGGCGACCGAGGGGCAGAATGTGGAGATGTCCTGCGCCTTCCAGAGCGGCTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302287.7
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
ENST00000495904.1
CDS CCA 72 bp CAGCGAGGCTTCCTGCGGAGCCCAGGCTGGAATCGCTaGGAAGTGTCTCGGCTGCCTGGCTGCCTGCTTTCA +
Preference number: 6 (lower is better)
Translates to: QRGFLRSPGWNR*EVSRLPGCLLS
Trigger: TGAAAGCAGGCAGCCAGGCAGCCGAGACACTTCCCAGCGATTCCAGCCTGGGCTCCGCAGGAAGCCTCGCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302287.7
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
ENST00000495904.1
CDS GCA 72 bp ATGGCAGGCTCAGTCTCAGAGCCCTGGGCGCGACACTaGAAACATCCTGCTGCTTGCTTGGCGAGGGCTGGC +
Preference number: 6 (lower is better)
Translates to: MAGSVSEPWARH*KHPAACLARAG
Trigger: GCCAGCCCTCGCCAAGCAAGCAGCAGGATGTTTGCAGTGTCGCGCCCAGGGCTCTGAGACTGAGCCTGCCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302287.7
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
ENST00000495904.1
CDS GCA 72 bp GGAATCGCTGGGAAGTGTCTCGGCTGCCTGGCTGCCTaGTTTCAGCTACCTGGCAGCTCGTCCAACGTCAGC +
Preference number: 6 (lower is better)
Translates to: GIAGKCLGCLAA*FQLPGSSSNVS
Trigger: GCTGACGTTGGACGAGCTGCCAGGTAGCTGAAAGCAGGCAGCCAGGCAGCCGAGACACTTCCCAGCGATTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302287.7
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
ENST00000495904.1
CDS GCA 72 bp AGTCTCAGAGCCCTGGGCGCGACACTGCAAACATCCTaGTGCTTGCTTGGCGAGGGCTGGCTGTGGGGAGAA +
Preference number: 6 (lower is better)
Translates to: SLRALGATLQTS*CLLGEGWLWGE
Trigger: TTCTCCCCACAGCCAGCCCTCGCCAAGCAAGCAGCAGGATGTTTGCAGTGTCGCGCCCAGGGCTCTGAGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302287.7
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
ENST00000495904.1
CDS GCA 72 bp CATGGATGCTGCTGGGGATGGCTGCGGAGACGTTCTTaGGGGGCTTCATATCCTGCAGCCACATGGGCGAGG +
Preference number: 6 (lower is better)
Translates to: HGCCWGWLRRRS*GASYPAATWAR
Trigger: CCTCGCCCATGTGGCTGCAGGATATGAAGCCCCGCAAGAACGTCTCCGCAGCCATCCCCAGCAGCATCCATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000302287.7
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
ENST00000466888.5
ENST00000469952.1
ENST00000498834.5
CDS GCA 72 bp AGGTGGAGTGCGTTCGTTGGTTGGCAGAGCCATGGATaGTGCTGGGGATGGCTGCGGAGACGTTCTTGCGGG +
Preference number: 6 (lower is better)
Translates to: RWSAFVGWQSHG*CWGWLRRRSCG
Trigger: CCCGCAAGAACGTCTCCGCAGCCATCCCCAGCAGCATCCATGGCTCTGCCAACCAACGAACGCACTCCACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000302287.7
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
ENST00000466888.5
ENST00000469952.1
ENST00000498834.5
CDS CCA 72 bp CCTGGGCGCGACACTGCAAACATCCTGCTGCTTGCTTaGCGAGGGCTGGCTGTGGGGAGAAGGGATTGCGAT +
Preference number: 6 (lower is better)
Translates to: PGRDTANILLLA*RGLAVGRRDCD
Trigger: ATCGCAATCCCTTCTCCCCACAGCCAGCCCTCGCCAAGCAAGCAGCAGGATGTTTGCAGTGTCGCGCCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302287.7
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
ENST00000495904.1
CDS CCA 72 bp GCGTGCGAGTGGATGGCAGGCTCAGTCTCAGAGCCCTaGGCGCGACACTGCAAACATCCTGCTGCTTGCTTG +
Preference number: 6 (lower is better)
Translates to: ACEWMAGSVSEP*ARHCKHPAACL
Trigger: CAAGCAAGCAGCAGGATGTTTGCAGTGTCGCGCCCAGGGCTCTGAGACTGAGCCTGCCATCCACTCGCACGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302287.7
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
ENST00000495904.1
CDS CAA 90 bp TTGGCAGAGCCATGGATGCTGCTGGGGATGGCTGCGGAGACGTTCTaGCGGGGCTTCATATCCTGCAGCCACATGGGCGAGGCTTCGAAG +
Preference number: 6 (lower is better)
Translates to: LAEPWMLLGMAAETF*RGFISCSHMGEASK
Trigger: CTTCGAAGCCTCGCCCATGTGGCTGCAGGATATGAAGCCCCGCAAGAACGTCTCCGCAGCCATCCCCAGCAGCATCCATGGCTCTGCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000302287.7
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
ENST00000466888.5
ENST00000469952.1
ENST00000498834.5
CDS GCA 72 bp GTTAGAACCAGCTGGCTGGGATTCAGCGAGGCTTCCTaGGGAGCCCAGGCTGGAATCGCTGGGAAGTGTCTC +
Preference number: 6 (lower is better)
Translates to: VRTSWLGFSEAS*GAQAGIAGKCL
Trigger: GAGACACTTCCCAGCGATTCCAGCCTGGGCTCCGCAGGAAGCCTCGCTGAATCCCAGCCAGCTGGTTCTAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302287.7
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
ENST00000495904.1
CDS CCA 72 bp AGCCGAAAAGCCCTGAAAGAAAGGCGTGCGAGTGGATaGCAGGCTCAGTCTCAGAGCCCTGGGCGCGACACT +
Preference number: 6 (lower is better)
Translates to: SRKALKERRASG*QAQSQSPGRDT
Trigger: AGTGTCGCGCCCAGGGCTCTGAGACTGAGCCTGCCATCCACTCGCACGCCTTTCTTTCAGGGCTTTTCGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302287.7
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
ENST00000495904.1
CDS CCA 72 bp CAACAGCCGAAAAGCCCTGAAAGAAAGGCGTGCGAGTaGATGGCAGGCTCAGTCTCAGAGCCCTGGGCGCGA +
Preference number: 6 (lower is better)
Translates to: QQPKSPERKACE*MAGSVSEPWAR
Trigger: TCGCGCCCAGGGCTCTGAGACTGAGCCTGCCATCCACTCGCACGCCTTTCTTTCAGGGCTTTTCGGCTGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302287.7
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
ENST00000495904.1
CDS CCA 72 bp AGTGCGTTCGTTGGTTGGCAGAGCCATGGATGCTGCTaGGGATGGCTGCGGAGACGTTCTTGCGGGGCTTCA +
Preference number: 6 (lower is better)
Translates to: SAFVGWQSHGCC*GWLRRRSCGAS
Trigger: TGAAGCCCCGCAAGAACGTCTCCGCAGCCATCCCCAGCAGCATCCATGGCTCTGCCAACCAACGAACGCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000302287.7
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
ENST00000466888.5
ENST00000469952.1
ENST00000498834.5
CDS CCA 72 bp CTGGAGGTGGAGTGCGTTCGTTGGTTGGCAGAGCCATaGATGCTGCTGGGGATGGCTGCGGAGACGTTCTTG +
Preference number: 6 (lower is better)
Translates to: LEVECVRWLAEP*MLLGMAAETFL
Trigger: CAAGAACGTCTCCGCAGCCATCCCCAGCAGCATCCATGGCTCTGCCAACCAACGAACGCACTCCACCTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000302287.7
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
ENST00000466888.5
ENST00000469952.1
ENST00000498834.5
CDS GCA 72 bp ATGGCTGCGGAGACGTTCTTGCGGGGCTTCATATCCTaGAGCCACATGGGCGAGGCTTCGAAGGCCTGCATT +
Preference number: 6 (lower is better)
Translates to: MAAETFLRGFIS*SHMGEASKACI
Trigger: AATGCAGGCCTTCGAAGCCTCGCCCATGTGGCTGCAGGATATGAAGCCCCGCAAGAACGTCTCCGCAGCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000302287.7
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
ENST00000466888.5
ENST00000469952.1
ENST00000498834.5
CDS GCA 72 bp GATTTGCTCTTTGCTGGAGGAGCCAGCACGCAGCTCTaGACACCAGGGGTTGATCCATGGCCAGGTTGGGGA +
Preference number: 6 (lower is better)
Translates to: DLLFAGGASTQL*TPGVDPWPGWG
Trigger: TCCCCAACCTGGCCATGGATCAACCCCTGGTGTGCAGAGCTGCGTGCTGGCTCCTCCAGCAAAGAGCAAATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404951.5
CDS CCA 72 bp AGGGATTGCGATTCTGGAAGGTTAGAACCAGCTGGCTaGGATTCAGCGAGGCTTCCTGCGGAGCCCAGGCTG +
Preference number: 6 (lower is better)
Translates to: RDCDSGRLEPAG*DSARLPAEPRL
Trigger: CAGCCTGGGCTCCGCAGGAAGCCTCGCTGAATCCCAGCCAGCTGGTTCTAACCTTCCAGAATCGCAATCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302287.7
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
ENST00000495904.1
CDS CCA 72 bp CAGCTCTGCACACCAGGGGTTGATCCATGGCCAGGTTaGGGAAGAGGAGCAGGAAGCCGCTTCACAGTTCTG +
Preference number: 6 (lower is better)
Translates to: QLCTPGVDPWPG*GRGAGSRFTVL
Trigger: CAGAACTGTGAAGCGGCTTCCTGCTCCTCTTCCCCAACCTGGCCATGGATCAACCCCTGGTGTGCAGAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404951.5
CDS CCA 72 bp GAGAAGGGATTGCGATTCTGGAAGGTTAGAACCAGCTaGCTGGGATTCAGCGAGGCTTCCTGCGGAGCCCAG +
Preference number: 6 (lower is better)
Translates to: EKGLRFWKVRTS*LGFSEASCGAQ
Trigger: CTGGGCTCCGCAGGAAGCCTCGCTGAATCCCAGCCAGCTGGTTCTAACCTTCCAGAATCGCAATCCCTTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302287.7
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
ENST00000495904.1
CDS CCA 72 bp GTTTGGGGATTTTGGCTACCACTTGAGGGCTGGAGGTaGAGTGCGTTCGTTGGTTGGCAGAGCCATGGATGC +
Preference number: 6 (lower is better)
Translates to: VWGFWLPLEGWR*SAFVGWQSHGC
Trigger: GCATCCATGGCTCTGCCAACCAACGAACGCACTCCACCTCCAGCCCTCAAGTGGTAGCCAAAATCCCCAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000302287.7
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
ENST00000466888.5
ENST00000469952.1
ENST00000498834.5
CDS TCA 72 bp CGAAGGCCTGCATTCTGCGGGCATGGCTGTTGGCATTaGCTTTCAGATAGGCCTGGGCCTTGTGTTCCTGAA +
Preference number: 6 (lower is better)
Translates to: RRPAFCGHGCWH*LSDRPGPCVPE
Trigger: TTCAGGAACACAAGGCCCAGGCCTATCTGAAAGTCAATGCCAACAGCCATGCCCGCAGAATGCAGGCCTTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000302287.7
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
ENST00000466888.5
ENST00000469952.1
ENST00000498834.5
CDS TCA 72 bp GGGAAGAGGAGCAGGAAGCCGCTTCACAGTTCTGTGTaGCGTTGGGAAGGTGGGAAGGGGGTCAGTAGAAAA +
Preference number: 6 (lower is better)
Translates to: GKRSRKPLHSSV*RWEGGKGVSRK
Trigger: TTTTCTACTGACCCCCTTCCCACCTTCCCAACGTCACACAGAACTGTGAAGCGGCTTCCTGCTCCTCTTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404951.5
CDS CCA 72 bp GACTTTGTTTGGGGATTTTGGCTACCACTTGAGGGCTaGAGGTGGAGTGCGTTCGTTGGTTGGCAGAGCCAT +
Preference number: 6 (lower is better)
Translates to: DFVWGFWLPLEG*RWSAFVGWQSH
Trigger: ATGGCTCTGCCAACCAACGAACGCACTCCACCTCCAGCCCTCAAGTGGTAGCCAAAATCCCCAAACAAAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000302287.7
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
ENST00000466888.5
ENST00000469952.1
ENST00000498834.5
CDS CCA 72 bp TCCTCGCACCTGATTGTGGACTTTGTTTGGGGATTTTaGCTACCACTTGAGGGCTGGAGGTGGAGTGCGTTC +
Preference number: 6 (lower is better)
Translates to: SSHLIVDFVWGF*LPLEGWRWSAF
Trigger: GAACGCACTCCACCTCCAGCCCTCAAGTGGTAGCCAAAATCCCCAAACAAAGTCCACAATCAGGTGCGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407838.7
ENST00000466888.5
CDS CCA 72 bp TTGGAGACACTGATTGTGGACTTTGTTTGGGGATTTTaGCTACCACTTGAGGGCTGGAGGTGGAGTGCGTTC +
Preference number: 6 (lower is better)
Translates to: LETLIVDFVWGF*LPLEGWRWSAF
Trigger: GAACGCACTCCACCTCCAGCCCTCAAGTGGTAGCCAAAATCCCCAAACAAAGTCCACAATCAGTGTCTCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404951.5
CDS CCA 72 bp CAGGCGATTTGCTCTTTGCTGATTGTGGACTTTGTTTaGGGATTTTGGCTACCACTTGAGGGCTGGAGGTGG +
Preference number: 6 (lower is better)
Translates to: QAICSLLIVDFV*GFWLPLEGWRW
Trigger: CCACCTCCAGCCCTCAAGTGGTAGCCAAAATCCCCAAACAAAGTCCACAATCAGCAAAGAGCAAATCGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402613.4
ENST00000498834.5
CDS CCA 72 bp TTTCCATACCTGATTGTGGACTTTGTTTGGGGATTTTaGCTACCACTTGAGGGCTGGAGGTGGAGTGCGTTC +
Preference number: 6 (lower is better)
Translates to: FPYLIVDFVWGF*LPLEGWRWSAF
Trigger: GAACGCACTCCACCTCCAGCCCTCAAGTGGTAGCCAAAATCCCCAAACAAAGTCCACAATCAGGTATGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS GCA 72 bp GTTCCTGAAGCTCCCCGTAGTTGGCATCAGTCACCCTaGACTCATATAAGCCTTCATCCTTTTTCCTCACTT +
Preference number: 6 (lower is better)
Translates to: VPEAPRSWHQSP*THISLHPFSSL
Trigger: AAGTGAGGAAAAAGGATGAAGGCTTATATGAGTGCAGGGTGACTGATGCCAACTACGGGGAGCTTCAGGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000302287.7
ENST00000402613.4
ENST00000404951.5
ENST00000407838.7
ENST00000466888.5
ENST00000469952.1
ENST00000498834.5
CDS TCA 72 bp AAGGAAGGACTAGTAGAGGTGGTCTGTGGAGATGTTTaGCTTCTGGAAGGATTGGAGACACTGATTGTGGAC +
Preference number: 6 (lower is better)
Translates to: KEGLVEVVCGDV*LLEGLETLIVD
Trigger: GTCCACAATCAGTGTCTCCAATCCTTCCAGAAGTCAAACATCTCCACAGACCACCTCTACTAGTCCTTCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404951.5
CDS CCA 72 bp AGAGAGAAGAAAGGAAGGACTAGTAGAGGTGGTCTGTaGAGATGTTTGACTTCTGGAAGGATTGGAGACACT +
Preference number: 6 (lower is better)
Translates to: REKKGRTSRGGL*RCLTSGRIGDT
Trigger: AGTGTCTCCAATCCTTCCAGAAGTCAAACATCTCCACAGACCACCTCTACTAGTCCTTCCTTTCTTCTCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404951.5
CDS CAA 72 bp AAAGGAAGGACTAGTAGAGGTGGTCTGTGGAGATGTTaGACTTCTGGAAGGATTGGAGACACTGATTGTGGA +
Preference number: 6 (lower is better)
Translates to: KGRTSRGGLWRC*TSGRIGDTDCG
Trigger: TCCACAATCAGTGTCTCCAATCCTTCCAGAAGTCAAACATCTCCACAGACCACCTCTACTAGTCCTTCCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404951.5
CDS CAA 90 bp AGAGAGAAGAAAGGAAGGACTAGTAGAGGTGGTCTGTGGAGATGTTaGACTTCTGGAAGGATTGGAGACACTGATTGTGGACTTTGTTTG +
Preference number: 6 (lower is better)
Translates to: REKKGRTSRGGLWRC*TSGRIGDTDCGLCL
Trigger: CAAACAAAGTCCACAATCAGTGTCTCCAATCCTTCCAGAAGTCAAACATCTCCACAGACCACCTCTACTAGTCCTTCCTTTCTTCTCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404951.5
CDS TCA 72 bp GCAGGCTCGGTGCTCACCTCTCATAATCACTTGCACTaGACTAGGTCTCCGATTTTAAAAATCACCATTCAT +
Preference number: 6 (lower is better)
Translates to: AGSVLTSHNHLH*TRSPILKITIH
Trigger: ATGAATGGTGATTTTTAAAATCGGAGACCTAGTTCAGTGCAAGTGATTATGAGAGGTGAGCACCGAGCCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302287.7
CDS TCA 72 bp AAATCACCATTCATAAATCTGTCTACTCTATACGACTaGCCTTTCTGTGGAGCGTTTGTGAGTGGTAAAATA +
Preference number: 6 (lower is better)
Translates to: KSPFINLSTLYD*PFCGAFVSGKI
Trigger: TATTTTACCACTCACAAACGCTCCACAGAAAGGTCAGTCGTATAGAGTAGACAGATTTATGAATGGTGATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302287.7