RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for VSIG10L2 (Homo sapiens)

Ensembl gene IDs: ENSG00000283703

Ensembl transcript IDs: ENST00000638511.1, ENST00000638636.2, ENST00000640497.1

Found 401 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAGCTCCCCCAGCCTGGGGGCGGGAAGCTACATCTGCAGTACCTCTaGTCCGTATCTTGTGGGCTGCGACTCCTGGAGTCGGACCACTGC +
Preference number: 1 (lower is better)
Translates to: QLPQPGGGKLHLQYL*SVSCGLRLLESDHC
Trigger: GCAGTGGTCCGACTCCAGGAGTCGCAGCCCACAAGATACGGAGCAGAGGTACTGCAGATGTAGCTTCCCGCCCCCAGGCTGGGGGAGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR GCA 90 bp GCTCTGTGGGCCAGCTCCCCCAGCCTGGGGGCGGGAAGCTACATCTaGAGTACCTCTGCTCCGTATCTTGTGGGCTGCGACTCCTGGAGT +
Preference number: 1 (lower is better)
Translates to: ALWASSPSLGAGSYI*STSAPYLVGCDSWS
Trigger: ACTCCAGGAGTCGCAGCCCACAAGATACGGAGCAGAGGTACTGCAGATGTAGCTTCCCGCCCCCAGGCTGGGGGAGCTGGCCCACAGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR CCA 90 bp CCACCTCCTCGGGGCAACTTTGCGTTTCCTTGGAGGGAAGGGAGGTaGGTAGGAGAGGAGCTTGGGAGGATGAGGAGGAGCGGTCCCGCC +
Preference number: 1 (lower is better)
Translates to: PPPRGNFAFPWREGR*VGEELGRMRRSGPA
Trigger: GGCGGGACCGCTCCTCCTCATCCTCCCAAGCTCCTCTCCTACCCACCTCCCTTCCCTCCAAGGAAACGCAAAGTTGCCCCGAGGAGGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR GCA 90 bp CAGGCGCCACGTCCCTTGTGCTGGCGGGTCCCCCGTTGGCTTTCTTaGCGTTTCTTCTCATCTGTGTCTCCTGCAGAGGCGGCTCGGAGT +
Preference number: 1 (lower is better)
Translates to: QAPRPLCWRVPRWLS*RFFSSVSPAEAARS
Trigger: ACTCCGAGCCGCCTCTGCAGGAGACACAGATGAGAAGAAACGGCAAGAAAGCCAACGGGGGACCCGCCAGCACAAGGGACGTGGCGCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR TCA 90 bp GCCAGAGAAGCTGCTCTCTGGCCTCCGCGGGCAGAGCTCTGCTTATaGCTTCGTCTTCCAGAGGTCCACATTTCTCCCCTTGACGCCCCC +
Preference number: 1 (lower is better)
Translates to: AREAALWPPRAELCL*LRLPEVHISPLDAP
Trigger: GGGGGCGTCAAGGGGAGAAATGTGGACCTCTGGAAGACGAAGTCATAAGCAGAGCTCTGCCCGCGGAGGCCAGAGAGCAGCTTCTCTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR GCA 90 bp TGCCGTGGAATTCCTCCGAGGCTCCAACTCCGCAGCCAGAGAAGCTaGTCTCTGGCCTCCGCGGGCAGAGCTCTGCTTATGACTTCGTCT +
Preference number: 1 (lower is better)
Translates to: CRGIPPRLQLRSQRS*SLASAGRALLMTSS
Trigger: AGACGAAGTCATAAGCAGAGCTCTGCCCGCGGAGGCCAGAGAGCAGCTTCTCTGGCTGCGGAGTTGGAGCCTCGGAGGAATTCCACGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR CCA 90 bp GTCTCCTTTCAGGCGCCACGTCCCTTGTGCTGGCGGGTCCCCCGTTaGCTTTCTTGCCGTTTCTTCTCATCTGTGTCTCCTGCAGAGGCG +
Preference number: 1 (lower is better)
Translates to: VSFQAPRPLCWRVPR*LSCRFFSSVSPAEA
Trigger: CGCCTCTGCAGGAGACACAGATGAGAAGAAACGGCAAGAAAGCCAACGGGGGACCCGCCAGCACAAGGGACGTGGCGCCTGAAAGGAGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR TCA 90 bp ACACACACACTTGGAGCTAGTGAGTCATGCTGGCAGCTGACATTGTaGCTCTGGAACAGCCCCGGTGCTCTGTGGGCCAGCTCCCCCAGC +
Preference number: 1 (lower is better)
Translates to: THTLGASESCWQLTL*LWNSPGALWASSPS
Trigger: GCTGGGGGAGCTGGCCCACAGAGCACCGGGGCTGTTCCAGAGTCACAATGTCAGCTGCCAGCATGACTCACTAGCTCCAAGTGTGTGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR GCA 90 bp GCGGGAAGCTACATCTGCAGTACCTCTGCTCCGTATCTTGTGGGCTaGGACTCCTGGAGTCGGACCACTGCAGCGTCAGTGATGTTCGTA +
Preference number: 1 (lower is better)
Translates to: AGSYICSTSAPYLVG*DSWSRTTAASVMFV
Trigger: TACGAACATCACTGACGCTGCAGTGGTCCGACTCCAGGAGTCGCAGCCCACAAGATACGGAGCAGAGGTACTGCAGATGTAGCTTCCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR GCA 90 bp TCTTTGGATGGAACCAGTCCCGTTCCGTATGCTGTGATCTATCCCTaGCGTGGAATTCCTCCGAGGCTCCAACTCCGCAGCCAGAGAAGC +
Preference number: 1 (lower is better)
Translates to: SLDGTSPVPYAVIYP*RGIPPRLQLRSQRS
Trigger: GCTTCTCTGGCTGCGGAGTTGGAGCCTCGGAGGAATTCCACGGCAGGGATAGATCACAGCATACGGAACGGGACTGGTTCCATCCAAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR CCA 90 bp CTTTGCGTTTCCTTGGAGGGAAGGGAGGTGGGTAGGAGAGGAGCTTaGGAGGATGAGGAGGAGCGGTCCCGCCTCACACATTGTCTATTT +
Preference number: 1 (lower is better)
Translates to: LCVSLEGREVGRRGA*EDEEERSRLTHCLF
Trigger: AAATAGACAATGTGTGAGGCGGGACCGCTCCTCCTCATCCTCCCAAGCTCCTCTCCTACCCACCTCCCTTCCCTCCAAGGAAACGCAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR TCA 90 bp ACAAACAGACACACACACTTGGAGCTAGTGAGTCATGCTGGCAGCTaGCATTGTGACTCTGGAACAGCCCCGGTGCTCTGTGGGCCAGCT +
Preference number: 1 (lower is better)
Translates to: TNRHTHLELVSHAGS*HCDSGTAPVLCGPA
Trigger: AGCTGGCCCACAGAGCACCGGGGCTGTTCCAGAGTCACAATGTCAGCTGCCAGCATGACTCACTAGCTCCAAGTGTGTGTGTCTGTTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR CCA 90 bp AGGAACACACACCTACACACCTTGCTTCTTCCCACTAGCCAAACCTaGGACCCAGCCATCAGCCTGTCTCTGTGGGAGTCGCAATGGAAG +
Preference number: 1 (lower is better)
Translates to: RNTHLHTLLLPTSQT*DPAISLSLWESQWK
Trigger: CTTCCATTGCGACTCCCACAGAGACAGGCTGATGGCTGGGTCCCAGGTTTGGCTAGTGGGAAGAAGCAAGGTGTGTAGGTGTGTGTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR TCA 90 bp TTGTGGTTCACTCTTTGGATGGAACCAGTCCCGTTCCGTATGCTGTaGTCTATCCCTGCCGTGGAATTCCTCCGAGGCTCCAACTCCGCA +
Preference number: 1 (lower is better)
Translates to: LWFTLWMEPVPFRML*SIPAVEFLRGSNSA
Trigger: TGCGGAGTTGGAGCCTCGGAGGAATTCCACGGCAGGGATAGATCACAGCATACGGAACGGGACTGGTTCCATCCAAAGAGTGAACCACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR GCA 90 bp CTCTGCTCCGTATCTTGTGGGCTGCGACTCCTGGAGTCGGACCACTaGAGCGTCAGTGATGTTCGTAAGCTATGGTTGAGCAAAGGAACA +
Preference number: 1 (lower is better)
Translates to: LCSVSCGLRLLESDH*SVSDVRKLWLSKGT
Trigger: TGTTCCTTTGCTCAACCATAGCTTACGAACATCACTGACGCTGCAGTGGTCCGACTCCAGGAGTCGCAGCCCACAAGATACGGAGCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR CCA 90 bp TACATCTGCAGTACCTCTGCTCCGTATCTTGTGGGCTGCGACTCCTaGAGTCGGACCACTGCAGCGTCAGTGATGTTCGTAAGCTATGGT +
Preference number: 1 (lower is better)
Translates to: YICSTSAPYLVGCDS*SRTTAASVMFVSYG
Trigger: ACCATAGCTTACGAACATCACTGACGCTGCAGTGGTCCGACTCCAGGAGTCGCAGCCCACAAGATACGGAGCAGAGGTACTGCAGATGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR CCA 90 bp CTCTGTTCTGACTGCAGAGATCAAGGCCCTGAAGGAGCAGGATCTTaGGCAAGTGTTTTAGGGGACGCTGAGAACATACCTGACCCTGGG +
Preference number: 1 (lower is better)
Translates to: LCSDCRDQGPEGAGS*ASVLGDAENIPDPG
Trigger: CCCAGGGTCAGGTATGTTCTCAGCGTCCCCTAAAACACTTGCCCAAGATCCTGCTCCTTCAGGGCCTTGATCTCTGCAGTCAGAACAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR GCA 90 bp ACTTCTATAGCACCACAGATCCTTCCCAGTACCATGGCTTTCACTTaGCCTCAGACACCCAGAGATCCCTGTCTCCCCATTGTGGGTCCT +
Preference number: 1 (lower is better)
Translates to: TSIAPQILPSTMAFT*PQTPRDPCLPIVGP
Trigger: AGGACCCACAATGGGGAGACAGGGATCTCTGGGTGTCTGAGGGCAAGTGAAAGCCATGGTACTGGGAAGGATCTGTGGTGCTATAGAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR GCA 90 bp AAGCATTGTGGTTCACTCTTTGGATGGAACCAGTCCCGTTCCGTATaGTGTGATCTATCCCTGCCGTGGAATTCCTCCGAGGCTCCAACT +
Preference number: 1 (lower is better)
Translates to: KHCGSLFGWNQSRSV*CDLSLPWNSSEAPT
Trigger: AGTTGGAGCCTCGGAGGAATTCCACGGCAGGGATAGATCACAGCATACGGAACGGGACTGGTTCCATCCAAAGAGTGAACCACAATGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR GCA 90 bp AGTCACTGTGATGGTGACATTCACTGGAGAATCCGTGGTTTCTTGTaGAGGATCCAAACCTGGGGTGGTGGTTGGTGTTTCAAGGCCTGC +
Preference number: 1 (lower is better)
Translates to: SHCDGDIHWRIRGFL*RIQTWGGGWCFKAC
Trigger: GCAGGCCTTGAAACACCAACCACCACCCCAGGTTTGGATCCTGCACAAGAAACCACGGATTCTCCAGTGAATGTCACCATCACAGTGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640497.1
3UTR CCA 90 bp CTCCTGGAGTCGGACCACTGCAGCGTCAGTGATGTTCGTAAGCTATaGTTGAGCAAAGGAACACACACCTACACACCTTGCTTCTTCCCA +
Preference number: 1 (lower is better)
Translates to: LLESDHCSVSDVRKL*LSKGTHTYTPCFFP
Trigger: TGGGAAGAAGCAAGGTGTGTAGGTGTGTGTTCCTTTGCTCAACCATAGCTTACGAACATCACTGACGCTGCAGTGGTCCGACTCCAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR CCA 90 bp CTTTGGGCCTTATGGTGTTGCAGTCACTGTGATGGTGACATTCACTaGAGAATCCGTGGTTTCTTGTGCAGGATCCAAACCTGGGGTGGT +
Preference number: 1 (lower is better)
Translates to: LWALWCCSHCDGDIH*RIRGFLCRIQTWGG
Trigger: ACCACCCCAGGTTTGGATCCTGCACAAGAAACCACGGATTCTCCAGTGAATGTCACCATCACAGTGACTGCAACACCATAAGGCCCAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640497.1
3UTR TCA 90 bp GCCTGTCTCTGTGGGAGTCGCAATGGAAGTAGCCCTCTATTGGCGTaGACATCAGCTCTGATTTATTTAGGAATTGCTCCATCCACAGAC +
Preference number: 1 (lower is better)
Translates to: ACLCGSRNGSSPLLA*TSALIYLGIAPSTD
Trigger: GTCTGTGGATGGAGCAATTCCTAAATAAATCAGAGCTGATGTTCACGCCAATAGAGGGCTACTTCCATTGCGACTCCCACAGAGACAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR TCA 90 bp TGTCTCCTGCAGAGGCGGCTCGGAGTCCCGAGTCTTCTAGTCAGTTaGACAAGCATTCATTTGTGTTTTCACCCAGATTACAGACACACA +
Preference number: 1 (lower is better)
Translates to: CLLQRRLGVPSLLVS*TSIHLCFHPDYRHT
Trigger: TGTGTGTCTGTAATCTGGGTGAAAACACAAATGAATGCTTGTTCAACTGACTAGAAGACTCGGGACTCCGAGCCGCCTCTGCAGGAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR GCA 90 bp TTTATATTTAGGCGGTATGAGTTCTCCCTAAGCGTGAGTTGGCTCTaGCCTGCACAGGCACCCAAACAGTCCTACCTAATGTCACTTCAC +
Preference number: 1 (lower is better)
Translates to: FIFRRYEFSLSVSWL*PAQAPKQSYLMSLH
Trigger: GTGAAGTGACATTAGGTAGGACTGTTTGGGTGCCTGTGCAGGGCAGAGCCAACTCACGCTTAGGGAGAACTCATACCGCCTAAATATAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR CCA 90 bp ATTGCCTTTATATTTAGGCGGTATGAGTTCTCCCTAAGCGTGAGTTaGCTCTGCCCTGCACAGGCACCCAAACAGTCCTACCTAATGTCA +
Preference number: 1 (lower is better)
Translates to: IAFIFRRYEFSLSVS*LCPAQAPKQSYLMS
Trigger: TGACATTAGGTAGGACTGTTTGGGTGCCTGTGCAGGGCAGAGCCAACTCACGCTTAGGGAGAACTCATACCGCCTAAATATAAAGGCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR CCA 90 bp TTTTTCCATACTGCTTTCCAAAAGCATTGTGGTTCACTCTTTGGATaGAACCAGTCCCGTTCCGTATGCTGTGATCTATCCCTGCCGTGG +
Preference number: 1 (lower is better)
Translates to: FFHTAFQKHCGSLFG*NQSRSVCCDLSLPW
Trigger: CCACGGCAGGGATAGATCACAGCATACGGAACGGGACTGGTTCCATCCAAAGAGTGAACCACAATGCTTTTGGAAAGCAGTATGGAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR GCA 90 bp AGTTTATCTGGAGCCATAATCTGGGCTCCTCCCATTTTTCCATACTaGTTTCCAAAAGCATTGTGGTTCACTCTTTGGATGGAACCAGTC +
Preference number: 1 (lower is better)
Translates to: SLSGAIIWAPPIFPY*FPKALWFTLWMEPV
Trigger: GACTGGTTCCATCCAAAGAGTGAACCACAATGCTTTTGGAAAGCAGTATGGAAAAATGGGAGGAGCCCAGATTATGGCTCCAGATAAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR GCA 90 bp CTTTCTTTCTGGGTGTTTTTGTCGAATGAGTCTATGAAGACTCAATaGATCCATCTTGGGCTGATCATGCCACAGATCTCATTCCAGCTA +
Preference number: 1 (lower is better)
Translates to: LSFWVFLSNESMKTQ*IHLGLIMPQISFQL
Trigger: TAGCTGGAATGAGATCTGTGGCATGATCAGCCCAAGATGGATGCATTGAGTCTTCATAGACTCATTCGACAAAAACACCCAGAAAGAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR CAA 90 bp TCAGGCGCCACGTCCCTTGTGCTGGCGGGTCCCCCGTTGGCTTTCTaGCCGTTTCTTCTCATCTGTGTCTCCTGCAGAGGCGGCTCGGAG +
Preference number: 2 (lower is better)
Translates to: SGATSLVLAGPPLAF*PFLLICVSCRGGSE
Trigger: CTCCGAGCCGCCTCTGCAGGAGACACAGATGAGAAGAAACGGCAAGAAAGCCAACGGGGGACCCGCCAGCACAAGGGACGTGGCGCCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR-3UTR GCA 90 bp GGCAGGCCCACCTCCTCGGGGCAACTTTGCGTTTCCTTGGAGGGAAGGGAGGTGCTCATCTGTGTCTCCTaGAGAGGCGGCTCGGAGTCC +
Preference number: 2 (lower is better)
Translates to: GRPTSSGQLCVSLEGREVLICVS*RGGSES
Trigger: GGACTCCGAGCCGCCTCTGCAGGAGACACAGATGAG...CACCTCCCTTCCCTCCAAGGAAACGCAAAGTTGCCCCGAGGAGGTGGGCCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR-3UTR GCA 90 bp CCTGAAACTCCCCTGTGCACACCCCTCTGTTCTGACTGCAGAGATCAAGGCCCTCTGGAACAGCCCCGGTaGTCTGTGGGCCAGCTCCCC +
Preference number: 2 (lower is better)
Translates to: PETPLCTPLCSDCRDQGPLEQPR*SVGQLP
Trigger: GGGGAGCTGGCCCACAGAGCACCGGGGCTGTTCCAG...AGGGCCTTGATCTCTGCAGTCAGAACAGAGGGGTGTGCACAGGGGAGTTTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR CAA 90 bp TGTCTCCTTTCAGGCGCCACGTCCCTTGTGCTGGCGGGTCCCCCGTaGGCTTTCTTGCCGTTTCTTCTCATCTGTGTCTCCTGCAGAGGC +
Preference number: 2 (lower is better)
Translates to: CLLSGATSLVLAGPP*AFLPFLLICVSCRG
Trigger: GCCTCTGCAGGAGACACAGATGAGAAGAAACGGCAAGAAAGCCAACGGGGGACCCGCCAGCACAAGGGACGTGGCGCCTGAAAGGAGACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR-3UTR TCA 90 bp AGCTGCTCTCTGGCCTCCGCGGGCAGAGCTCTGCTTATGACTTCGTCTTCCAGACCACATTTCTCCCCTTaGCGCCCCCTGTCTACCACC +
Preference number: 2 (lower is better)
Translates to: SCSLASAGRALLMTSSSRPHFSP*RPLSTT
Trigger: GGTGGTAGACAGGGGGCGTCAAGGGGAGAAATGTGG...TCTGGAAGACGAAGTCATAAGCAGAGCTCTGCCCGCGGAGGCCAGAGAGCAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR-3UTR GCA 90 bp CCTCCGAGGCTCCAACTCCGCAGCCAGAGAAGCTGCTCTCTGGCCTCCGCGGGCTGTTTTAGCATAAACTaGCCCGCTCCCACTGTATCA +
Preference number: 2 (lower is better)
Translates to: PPRLQLRSQRSCSLASAGCFSIN*PAPTVS
Trigger: TGATACAGTGGGAGCGGGGCAGTTTATGCTAAAACA...GCCCGCGGAGGCCAGAGAGCAGCTTCTCTGGCTGCGGAGTTGGAGCCTCGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR-3UTR CCA 90 bp TATGAGTTCTCCCTAAGCGTGAGTTGGCTCTGCCCTGCACAGGCACCCAAACAGAGAGAAGCTGCTCTCTaGCCTCCGCGGGCAGAGCTC +
Preference number: 2 (lower is better)
Translates to: YEFSLSVSWLCPAQAPKQREAAL*PPRAEL
Trigger: GAGCTCTGCCCGCGGAGGCCAGAGAGCAGCTTCTCT...CTGTTTGGGTGCCTGTGCAGGGCAGAGCCAACTCACGCTTAGGGAGAACTCATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR-3UTR TCA 90 bp AGGCGCCACGTCCCTTGTGCTGGCGGGTCCCCCGTTGGCTTTCTTGCCGTTTCTTTCGTAAGCTATGGTTaGGCAAAGGAACACACACCT +
Preference number: 2 (lower is better)
Translates to: RRHVPCAGGSPVGFLAVSFVSYG*AKEHTP
Trigger: AGGTGTGTGTTCCTTTGCTCAACCATAGCTTACGAA...AGAAACGGCAAGAAAGCCAACGGGGGACCCGCCAGCACAAGGGACGTGGCGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR-3UTR TCA 90 bp TATGAGTTCTCCCTAAGCGTGAGTTGGCTCTGCCCTGCACAGGCACCCAAACAGCCCCAAGTCACTCAGTaGGCCATGGGACCTGAATCC +
Preference number: 2 (lower is better)
Translates to: YEFSLSVSWLCPAQAPKQPQVTQ*AMGPES
Trigger: GGATTCAGGTCCCATGGCTCACTGAGTGACTTGGGG...CTGTTTGGGTGCCTGTGCAGGGCAGAGCCAACTCACGCTTAGGGAGAACTCATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR-3UTR TCA 90 bp CTGCTTTCCAAAAGCATTGTGGTTCACTCTTTGGATGGAACCAGTCCCGTTCCGGCACTGACAGTCTGGTaGCAGGTGCTGCCAGGGTGC +
Preference number: 2 (lower is better)
Translates to: LLSKSIVVHSLDGTSPVPALTVW*QVLPGC
Trigger: GCACCCTGGCAGCACCTGTCACCAGACTGTCAGTGC...CGGAACGGGACTGGTTCCATCCAAAGAGTGAACCACAATGCTTTTGGAAAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR-3UTR GCA 90 bp AGCTGCTCTCTGGCCTCCGCGGGCAGAGCTCTGCTTATGACTTCGTCTTCCAGAACCATGGCTTTCACTTaGCCTCAGACACCCAGAGAT +
Preference number: 2 (lower is better)
Translates to: SCSLASAGRALLMTSSSRTMAFT*PQTPRD
Trigger: ATCTCTGGGTGTCTGAGGGCAAGTGAAAGCCATGGT...TCTGGAAGACGAAGTCATAAGCAGAGCTCTGCCCGCGGAGGCCAGAGAGCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR-3UTR GCA 90 bp ACCAGTCCCGTTCCGTATGCTGTGATCTATCCCTGCCGTGGAATTCCTCCGAGGTCCTCTTCCTTGTCCTaGCACCTCTGTCTTCCACAA +
Preference number: 2 (lower is better)
Translates to: TSPVPYAVIYPCRGIPPRSSSLS*HLCLPQ
Trigger: TTGTGGAAGACAGAGGTGGCAGGACAAGGAAGAGGA...CCTCGGAGGAATTCCACGGCAGGGATAGATCACAGCATACGGAACGGGACTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR-3UTR CCA 90 bp TATGAGTTCTCCCTAAGCGTGAGTTGGCTCTGCCCTGCACAGGCACCCAAACAGCTGTCTTCCACAAGGTaGGCCAGGGCTTCTCTTGTA +
Preference number: 2 (lower is better)
Translates to: YEFSLSVSWLCPAQAPKQLSSTR*ARASLV
Trigger: TACAAGAGAAGCCCTGGCCCACCTTGTGGAAGACAG...CTGTTTGGGTGCCTGTGCAGGGCAGAGCCAACTCACGCTTAGGGAGAACTCATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR-3UTR CCA 90 bp CCTGAAACTCCCCTGTGCACACCCCTCTGTTCTGACTGCAGAGATCAAGGCCCTTCCTTCCCAGTACCATaGCTTTCACTTGCCCTCAGA +
Preference number: 2 (lower is better)
Translates to: PETPLCTPLCSDCRDQGPSFPVP*LSLALR
Trigger: TCTGAGGGCAAGTGAAAGCCATGGTACTGGGAAGGA...AGGGCCTTGATCTCTGCAGTCAGAACAGAGGGGTGTGCACAGGGGAGTTTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR-3UTR CCA 90 bp ATAGCCCCTGAAGGTGGGAATACTCCCTGTTTGTACAACGCTGCTTATAGTTTGGTGGGCTGCGACTCCTaGAGTCGGACCACTGCAGCG +
Preference number: 2 (lower is better)
Translates to: IAPEGGNTPCLYNAAYSLVGCDS*SRTTAA
Trigger: CGCTGCAGTGGTCCGACTCCAGGAGTCGCAGCCCAC...CAAACTATAAGCAGCGTTGTACAAACAGGGAGTATTCCCACCTTCAGGGGCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR-3UTR CCA 90 bp GTGGTTCACTCTTTGGATGGAACCAGTCCCGTTCCGTATGCTGTGATCTATCCCTGGCGGGTCCCCCGTTaGCTTTCTTGCCGTTTCTTC +
Preference number: 2 (lower is better)
Translates to: VVHSLDGTSPVPYAVIYPWRVPR*LSCRFF
Trigger: GAAGAAACGGCAAGAAAGCCAACGGGGGACCCGCCA...GGGATAGATCACAGCATACGGAACGGGACTGGTTCCATCCAAAGAGTGAACCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR CAA 90 bp TACTTCTATAGCACCACAGATCCTTCCCAGTACCATGGCTTTCACTaGCCCTCAGACACCCAGAGATCCCTGTCTCCCCATTGTGGGTCC +
Preference number: 2 (lower is better)
Translates to: YFYSTTDPSQYHGFH*PSDTQRSLSPHCGS
Trigger: GGACCCACAATGGGGAGACAGGGATCTCTGGGTGTCTGAGGGCAAGTGAAAGCCATGGTACTGGGAAGGATCTGTGGTGCTATAGAAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR-3UTR TCA 90 bp GCGGTCCCGCCTCACACATTGTCTATTTTTACCATTAACCGAGCGCCACATGTTTGGCAGCTGACATTGTaGCTCTGGAACAGCCCCGGT +
Preference number: 2 (lower is better)
Translates to: AVPPHTLSIFTINRAPHVWQLTL*LWNSPG
Trigger: ACCGGGGCTGTTCCAGAGTCACAATGTCAGCTGCCA...AACATGTGGCGCTCGGTTAATGGTAAAAATAGACAATGTGTGAGGCGGGACCGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR-3UTR TCA 90 bp AGGCGCCACGTCCCTTGTGCTGGCGGGTCCCCCGTTGGCTTTCTTGCCGTTTCTAGTCTTCTAGTCAGTTaGACAAGCATTCATTTGTGT +
Preference number: 2 (lower is better)
Translates to: RRHVPCAGGSPVGFLAVSSLLVS*TSIHLC
Trigger: ACACAAATGAATGCTTGTTCAACTGACTAGAAGACT...AGAAACGGCAAGAAAGCCAACGGGGGACCCGCCAGCACAAGGGACGTGGCGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR-3UTR TCA 90 bp AGCTGCTCTCTGGCCTCCGCGGGCAGAGCTCTGCTTATGACTTCGTCTTCCAGACTCCACCTGGAAATTTaGTCTTTACTGTGCTCAGTG +
Preference number: 2 (lower is better)
Translates to: SCSLASAGRALLMTSSSRLHLEI*SLLCSV
Trigger: CACTGAGCACAGTAAAGATCAAATTTCCAGGTGGAG...TCTGGAAGACGAAGTCATAAGCAGAGCTCTGCCCGCGGAGGCCAGAGAGCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR-3UTR TCA 90 bp GTGGTTCACTCTTTGGATGGAACCAGTCCCGTTCCGTATGCTGTGATCTATCCCGCAGAGCTCTGCTTATaGCTTCGTCTTCCAGAGGTC +
Preference number: 2 (lower is better)
Translates to: VVHSLDGTSPVPYAVIYPAELCL*LRLPEV
Trigger: GACCTCTGGAAGACGAAGTCATAAGCAGAGCTCTGC...GGGATAGATCACAGCATACGGAACGGGACTGGTTCCATCCAAAGAGTGAACCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR-3UTR GCA 90 bp ATTTTTCCATACTGCTTTCCAAAAGCATTGTGGTTCACTCTTTGGATGGAACCAGCGCCACGTCCCTTGTaGTGGCGGGTCCCCCGTTGG +
Preference number: 2 (lower is better)
Translates to: IFPYCFPKALWFTLWMEPAPRPL*WRVPRW
Trigger: CCAACGGGGGACCCGCCAGCACAAGGGACGTGGCGC...TGGTTCCATCCAAAGAGTGAACCACAATGCTTTTGGAAAGCAGTATGGAAAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR-3UTR CCA 90 bp ATTTTTCCATACTGCTTTCCAAAAGCATTGTGGTTCACTCTTTGGATGGAACCAAGCCCCGGTGCTCTGTaGGCCAGCTCCCCCAGCCTG +
Preference number: 2 (lower is better)
Translates to: IFPYCFPKALWFTLWMEPSPGAL*ASSPSL
Trigger: CAGGCTGGGGGAGCTGGCCCACAGAGCACCGGGGCT...TGGTTCCATCCAAAGAGTGAACCACAATGCTTTTGGAAAGCAGTATGGAAAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR CAA 90 bp CTGGAGTCGGACCACTGCAGCGTCAGTGATGTTCGTAAGCTATGGTaGAGCAAAGGAACACACACCTACACACCTTGCTTCTTCCCACTA +
Preference number: 2 (lower is better)
Translates to: LESDHCSVSDVRKLW*SKGTHTYTPCFFPL
Trigger: TAGTGGGAAGAAGCAAGGTGTGTAGGTGTGTGTTCCTTTGCTCAACCATAGCTTACGAACATCACTGACGCTGCAGTGGTCCGACTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR-3UTR TCA 90 bp TATGAGTTCTCCCTAAGCGTGAGTTGGCTCTGCCCTGCACAGGCACCCAAACAGGCTACGTTGGTTTTATaGCCAAAGTCTGACAGAAGG +
Preference number: 2 (lower is better)
Translates to: YEFSLSVSWLCPAQAPKQATLVL*PKSDRR
Trigger: CCTTCTGTCAGACTTTGGTCATAAAACCAACGTAGC...CTGTTTGGGTGCCTGTGCAGGGCAGAGCCAACTCACGCTTAGGGAGAACTCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR-3UTR TCA 90 bp TATGAGTTCTCCCTAAGCGTGAGTTGGCTCTGCCCTGCACAGGCACCCAAACAGAGCCCTCTATTGGCGTaGACATCAGCTCTGATTTAT +
Preference number: 2 (lower is better)
Translates to: YEFSLSVSWLCPAQAPKQSPLLA*TSALIY
Trigger: ATAAATCAGAGCTGATGTTCACGCCAATAGAGGGCT...CTGTTTGGGTGCCTGTGCAGGGCAGAGCCAACTCACGCTTAGGGAGAACTCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR-3UTR TCA 90 bp TTTACTGTGCTCAGTGATCACGAAATTGGTCAAGCCTATTCATGTTCCTTCTCAAGGAGCTTGGGAGGATaGGGAGGAGCGGTCCCGCCT +
Preference number: 2 (lower is better)
Translates to: FTVLSDHEIGQAYSCSFSRSLGG*GGAVPP
Trigger: AGGCGGGACCGCTCCTCCTCATCCTCCCAAGCTCCT...TGAGAAGGAACATGAATAGGCTTGACCAATTTCGTGATCACTGAGCACAGTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR-3UTR CCA 90 bp ACCAGTCCCGTTCCGTATGCTGTGATCTATCCCTGCCGTGGAATTCCTCCGAGGGATGTTCGTAAGCTATaGTTGAGCAAAGGAACACAC +
Preference number: 2 (lower is better)
Translates to: TSPVPYAVIYPCRGIPPRDVRKL*LSKGTH
Trigger: GTGTGTTCCTTTGCTCAACCATAGCTTACGAACATC...CCTCGGAGGAATTCCACGGCAGGGATAGATCACAGCATACGGAACGGGACTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR-3UTR TCA 90 bp CTGCTTTCCAAAAGCATTGTGGTTCACTCTTTGGATGGAACCAGTCCCGTTCCGAGTCATGCTGGCAGCTaGCATTGTGACTCTGGAACA +
Preference number: 2 (lower is better)
Translates to: LLSKSIVVHSLDGTSPVPSHAGS*HCDSGT
Trigger: TGTTCCAGAGTCACAATGTCAGCTGCCAGCATGACT...CGGAACGGGACTGGTTCCATCCAAAGAGTGAACCACAATGCTTTTGGAAAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR-3UTR GCA 90 bp ATAGCCCCTGAAGGTGGGAATACTCCCTGTTTGTACAACGCTGCTTATAGTTTGTCCTCGGGGCAACTTTaGGTTTCCTTGGAGGGAAGG +
Preference number: 2 (lower is better)
Translates to: IAPEGGNTPCLYNAAYSLSSGQL*VSLEGR
Trigger: CCTTCCCTCCAAGGAAACGCAAAGTTGCCCCGAGGA...CAAACTATAAGCAGCGTTGTACAAACAGGGAGTATTCCCACCTTCAGGGGCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR-3UTR GCA 90 bp ATAGCCCCTGAAGGTGGGAATACTCCCTGTTTGTACAACGCTGCTTATAGTTTGGCGGGAAGCTACATCTaGAGTACCTCTGCTCCGTAT +
Preference number: 2 (lower is better)
Translates to: IAPEGGNTPCLYNAAYSLAGSYI*STSAPY
Trigger: ATACGGAGCAGAGGTACTGCAGATGTAGCTTCCCGC...CAAACTATAAGCAGCGTTGTACAAACAGGGAGTATTCCCACCTTCAGGGGCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR-3UTR TCA 90 bp GTGGTTCACTCTTTGGATGGAACCAGTCCCGTTCCGTATGCTGTGATCTATCCCTGTCGAATGAGTCTATaGAGACTCAATGCATCCATC +
Preference number: 2 (lower is better)
Translates to: VVHSLDGTSPVPYAVIYPCRMSL*RLNASI
Trigger: GATGGATGCATTGAGTCTTCATAGACTCATTCGACA...GGGATAGATCACAGCATACGGAACGGGACTGGTTCCATCCAAAGAGTGAACCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR-3UTR CCA 90 bp ATAGCCCCTGAAGGTGGGAATACTCCCTGTTTGTACAACGCTGCTTATAGTTTGAACTTTGCGTTTCCTTaGAGGGAAGGGAGGTGGGTA +
Preference number: 2 (lower is better)
Translates to: IAPEGGNTPCLYNAAYSLNFAFP*REGRWV
Trigger: TACCCACCTCCCTTCCCTCCAAGGAAACGCAAAGTT...CAAACTATAAGCAGCGTTGTACAAACAGGGAGTATTCCCACCTTCAGGGGCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR-3UTR TCA 90 bp ATTTTTCCATACTGCTTTCCAAAAGCATTGTGGTTCACTCTTTGGATGGAACCACAGAGATCAAGGCCCTaGAGGAGCAGGATCTTGGGC +
Preference number: 2 (lower is better)
Translates to: IFPYCFPKALWFTLWMEPQRSRP*RSRILG
Trigger: GCCCAAGATCCTGCTCCTTCAGGGCCTTGATCTCTG...TGGTTCCATCCAAAGAGTGAACCACAATGCTTTTGGAAAGCAGTATGGAAAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR-3UTR GCA 90 bp TTTACTGTGCTCAGTGATCACGAAATTGGTCAAGCCTATTCATGTTCCTTCTCACTGGAGTCGGACCACTaGAGCGTCAGTGATGTTCGT +
Preference number: 2 (lower is better)
Translates to: FTVLSDHEIGQAYSCSFSLESDH*SVSDVR
Trigger: ACGAACATCACTGACGCTGCAGTGGTCCGACTCCAG...TGAGAAGGAACATGAATAGGCTTGACCAATTTCGTGATCACTGAGCACAGTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR-3UTR GCA 90 bp TTTACTGTGCTCAGTGATCACGAAATTGGTCAAGCCTATTCATGTTCCTTCTCACCTGAAACTCCCCTGTaGACACCCCTCTGTTCTGAC +
Preference number: 2 (lower is better)
Translates to: FTVLSDHEIGQAYSCSFSPETPL*TPLCSD
Trigger: GTCAGAACAGAGGGGTGTGCACAGGGGAGTTTCAGG...TGAGAAGGAACATGAATAGGCTTGACCAATTTCGTGATCACTGAGCACAGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR-3UTR CCA 90 bp TTTACTGTGCTCAGTGATCACGAAATTGGTCAAGCCTATTCATGTTCCTTCTCACCTGTCTCCCCATTGTaGGTCCTCTTCCTTGTCCTG +
Preference number: 2 (lower is better)
Translates to: FTVLSDHEIGQAYSCSFSPVSPL*VLFLVL
Trigger: CAGGACAAGGAAGAGGACCCACAATGGGGAGACAGG...TGAGAAGGAACATGAATAGGCTTGACCAATTTCGTGATCACTGAGCACAGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR-3UTR TCA 90 bp ACTGTTAACTCATTTAACCCCCACAACTCATCTACAAAGTTGGCATTAAAATCCCACACCCCTCTGTTCTaGCTGCAGAGATCAAGGCCC +
Preference number: 2 (lower is better)
Translates to: TVNSFNPHNSSTKLALKSHTPLF*LQRSRP
Trigger: GGGCCTTGATCTCTGCAGTCAGAACAGAGGGGTGTG...GGATTTTAATGCCAACTTTGTAGATGAGTTGTGGGGGTTAAATGAGTTAACAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR-3UTR CCA 90 bp CTATTTTTACCATTAACCGAGCGCCACATGTTTATGAACTTCAGGATAGAAATTCCCACTAGCCAAACCTaGGACCCAGCCATCAGCCTG +
Preference number: 2 (lower is better)
Translates to: LFLPLTERHMFMNFRIEIPTSQT*DPAISL
Trigger: CAGGCTGATGGCTGGGTCCCAGGTTTGGCTAGTGGG...AATTTCTATCCTGAAGTTCATAAACATGTGGCGCTCGGTTAATGGTAAAAATAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR CAA 90 bp TGCACTGACAGTCTGGTGACAGGTGCTGCCAGGGTGCAAGTTACATaGCAATGTTCTAAACCTTTTGAAGTGTTCTTAGCAAAAGCCTTT +
Preference number: 2 (lower is better)
Translates to: CTDSLVTGAARVQVT*QCSKPFEVFLAKAF
Trigger: AAAGGCTTTTGCTAAGAACACTTCAAAAGGTTTAGAACATTGCAATGTAACTTGCACCCTGGCAGCACCTGTCACCAGACTGTCAGTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR-3UTR GCA 90 bp TTTACTGTGCTCAGTGATCACGAAATTGGTCAAGCCTATTCATGTTCCTTCTCATCTGGTGACAGGTGCTaGCAGGGTGCAAGTTACATT +
Preference number: 2 (lower is better)
Translates to: FTVLSDHEIGQAYSCSFSSGDRC*QGASYI
Trigger: AATGTAACTTGCACCCTGGCAGCACCTGTCACCAGA...TGAGAAGGAACATGAATAGGCTTGACCAATTTCGTGATCACTGAGCACAGTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR-3UTR CCA 90 bp ATAGCCCCTGAAGGTGGGAATACTCCCTGTTTGTACAACGCTGCTTATAGTTTGACCAGTTGTGAAGACTaGGTATTAAGTGAAAGTGGT +
Preference number: 2 (lower is better)
Translates to: IAPEGGNTPCLYNAAYSLTSCED*VLSESG
Trigger: ACCACTTTCACTTAATACCCAGTCTTCACAACTGGT...CAAACTATAAGCAGCGTTGTACAAACAGGGAGTATTCCCACCTTCAGGGGCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR-3UTR TCA 90 bp TTTACTGTGCTCAGTGATCACGAAATTGGTCAAGCCTATTCATGTTCCTTCTCATTTATGACCAAAGTCTaGCAGAAGGGCTCTTCCCAA +
Preference number: 2 (lower is better)
Translates to: FTVLSDHEIGQAYSCSFSFMTKV*QKGSSQ
Trigger: TTGGGAAGAGCCCTTCTGTCAGACTTTGGTCATAAA...TGAGAAGGAACATGAATAGGCTTGACCAATTTCGTGATCACTGAGCACAGTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR-3UTR GCA 90 bp ATTTTTCCATACTGCTTTCCAAAAGCATTGTGGTTCACTCTTTGGATGGAACCATGGAAGCAGCTAGCTTaGTCATACTTCTATAGCACC +
Preference number: 2 (lower is better)
Translates to: IFPYCFPKALWFTLWMEPWKQLA*SYFYST
Trigger: GGTGCTATAGAAGTATGAGCAAGCTAGCTGCTTCCA...TGGTTCCATCCAAAGAGTGAACCACAATGCTTTTGGAAAGCAGTATGGAAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR-3UTR GCA 90 bp ACTGTTAACTCATTTAACCCCCACAACTCATCTACAAAGTTGGCATTAAAATCCCAGGTGCTGCCAGGGTaGAAGTTACATTGCAATGTT +
Preference number: 2 (lower is better)
Translates to: TVNSFNPHNSSTKLALKSQVLPG*KLHCNV
Trigger: AACATTGCAATGTAACTTGCACCCTGGCAGCACCTG...GGATTTTAATGCCAACTTTGTAGATGAGTTGTGGGGGTTAAATGAGTTAACAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR-3UTR TCA 90 bp ATTTTTCCATACTGCTTTCCAAAAGCATTGTGGTTCACTCTTTGGATGGAACCAGGTGTTTTTGTCGAATaGGTCTATGAAGACTCAATG +
Preference number: 2 (lower is better)
Translates to: IFPYCFPKALWFTLWMEPGVFVE*VYEDSM
Trigger: CATTGAGTCTTCATAGACTCATTCGACAAAAACACC...TGGTTCCATCCAAAGAGTGAACCACAATGCTTTTGGAAAGCAGTATGGAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR GCA 72 bp CAGCCTGGGGGCGGGAAGCTACATCTGCAGTACCTCTaGTCCGTATCTTGTGGGCTGCGACTCCTGGAGTCG +
Preference number: 3 (lower is better)
Translates to: QPGGGKLHLQYL*SVSCGLRLLES
Trigger: CGACTCCAGGAGTCGCAGCCCACAAGATACGGAGCAGAGGTACTGCAGATGTAGCTTCCCGCCCCCAGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR GCA 72 bp CGATGTGGAGGCAGGCCCACCTCCTCGGGGCAACTTTaGGTTTCCTTGGAGGGAAGGGAGGTGGGTAGGAGA +
Preference number: 3 (lower is better)
Translates to: RCGGRPTSSGQL*VSLEGREVGRR
Trigger: TCTCCTACCCACCTCCCTTCCCTCCAAGGAAACGCAAAGTTGCCCCGAGGAGGTGGGCCTGCCTCCACATCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR CCA 72 bp CAGGCGCCACGTCCCTTGTGCTGGCGGGTCCCCCGTTaGCTTTCTTGCCGTTTCTTCTCATCTGTGTCTCCT +
Preference number: 3 (lower is better)
Translates to: QAPRPLCWRVPR*LSCRFFSSVSP
Trigger: AGGAGACACAGATGAGAAGAAACGGCAAGAAAGCCAACGGGGGACCCGCCAGCACAAGGGACGTGGCGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR CCA 72 bp CGGGGCAACTTTGCGTTTCCTTGGAGGGAAGGGAGGTaGGTAGGAGAGGAGCTTGGGAGGATGAGGAGGAGC +
Preference number: 3 (lower is better)
Translates to: RGNFAFPWREGR*VGEELGRMRRS
Trigger: GCTCCTCCTCATCCTCCCAAGCTCCTCTCCTACCCACCTCCCTTCCCTCCAAGGAAACGCAAAGTTGCCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR TCA 72 bp CTTGGAGCTAGTGAGTCATGCTGGCAGCTGACATTGTaGCTCTGGAACAGCCCCGGTGCTCTGTGGGCCAGC +
Preference number: 3 (lower is better)
Translates to: LGASESCWQLTL*LWNSPGALWAS
Trigger: GCTGGCCCACAGAGCACCGGGGCTGTTCCAGAGTCACAATGTCAGCTGCCAGCATGACTCACTAGCTCCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR GCA 72 bp GGAACCAGTCCCGTTCCGTATGCTGTGATCTATCCCTaGCGTGGAATTCCTCCGAGGCTCCAACTCCGCAGC +
Preference number: 3 (lower is better)
Translates to: GTSPVPYAVIYP*RGIPPRLQLRS
Trigger: GCTGCGGAGTTGGAGCCTCGGAGGAATTCCACGGCAGGGATAGATCACAGCATACGGAACGGGACTGGTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR TCA 72 bp GCTGCTCTCTGGCCTCCGCGGGCAGAGCTCTGCTTATaGCTTCGTCTTCCAGAGGTCCACATTTCTCCCCTT +
Preference number: 3 (lower is better)
Translates to: AALWPPRAELCL*LRLPEVHISPL
Trigger: AAGGGGAGAAATGTGGACCTCTGGAAGACGAAGTCATAAGCAGAGCTCTGCCCGCGGAGGCCAGAGAGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR GCA 72 bp TACATCTGCAGTACCTCTGCTCCGTATCTTGTGGGCTaGGACTCCTGGAGTCGGACCACTGCAGCGTCAGTG +
Preference number: 3 (lower is better)
Translates to: YICSTSAPYLVG*DSWSRTTAASV
Trigger: CACTGACGCTGCAGTGGTCCGACTCCAGGAGTCGCAGCCCACAAGATACGGAGCAGAGGTACTGCAGATGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR GCA 72 bp CAATTTTCTGTCTCCTTTCAGGCGCCACGTCCCTTGTaGTGGCGGGTCCCCCGTTGGCTTTCTTGCCGTTTC +
Preference number: 3 (lower is better)
Translates to: QFSVSFQAPRPL*WRVPRWLSCRF
Trigger: GAAACGGCAAGAAAGCCAACGGGGGACCCGCCAGCACAAGGGACGTGGCGCCTGAAAGGAGACAGAAAATTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR CCA 72 bp CACCTACACACCTTGCTTCTTCCCACTAGCCAAACCTaGGACCCAGCCATCAGCCTGTCTCTGTGGGAGTCG +
Preference number: 3 (lower is better)
Translates to: HLHTLLLPTSQT*DPAISLSLWES
Trigger: CGACTCCCACAGAGACAGGCTGATGGCTGGGTCCCAGGTTTGGCTAGTGGGAAGAAGCAAGGTGTGTAGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR CCA 72 bp GAAGCTACATCTGCAGTACCTCTGCTCCGTATCTTGTaGGCTGCGACTCCTGGAGTCGGACCACTGCAGCGT +
Preference number: 3 (lower is better)
Translates to: EATSAVPLLRIL*AATPGVGPLQR
Trigger: ACGCTGCAGTGGTCCGACTCCAGGAGTCGCAGCCCACAAGATACGGAGCAGAGGTACTGCAGATGTAGCTTC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR CCA 72 bp TTTTCTGTCTCCTTTCAGGCGCCACGTCCCTTGTGCTaGCGGGTCCCCCGTTGGCTTTCTTGCCGTTTCTTC +
Preference number: 3 (lower is better)
Translates to: FSVSFQAPRPLC*RVPRWLSCRFF
Trigger: GAAGAAACGGCAAGAAAGCCAACGGGGGACCCGCCAGCACAAGGGACGTGGCGCCTGAAAGGAGACAGAAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR CCA 72 bp AGTACCTCTGCTCCGTATCTTGTGGGCTGCGACTCCTaGAGTCGGACCACTGCAGCGTCAGTGATGTTCGTA +
Preference number: 3 (lower is better)
Translates to: STSAPYLVGCDS*SRTTAASVMFV
Trigger: TACGAACATCACTGACGCTGCAGTGGTCCGACTCCAGGAGTCGCAGCCCACAAGATACGGAGCAGAGGTACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR CCA 72 bp TGGAGAATCCGTGGTTTCTTGTGCAGGATCCAAACCTaGGGTGGTGGTTGGTGTTTCAAGGCCTGCCGGTGC +
Preference number: 3 (lower is better)
Translates to: WRIRGFLCRIQT*GGGWCFKACRC
Trigger: GCACCGGCAGGCCTTGAAACACCAACCACCACCCCAGGTTTGGATCCTGCACAAGAAACCACGGATTCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640497.1
3UTR-3UTR CAA 90 bp TATGAGTTCTCCCTAAGCGTGAGTTGGCTCTGCCCTGCACAGGCACCCAAACAGCAACTTTGCGTTTCCTaGGAGGGAAGGGAGGTGGGT +
Preference number: 3 (lower is better)
Translates to: YEFSLSVSWLCPAQAPKQQLCVS*EGREVG
Trigger: ACCCACCTCCCTTCCCTCCAAGGAAACGCAAAGTTG...CTGTTTGGGTGCCTGTGCAGGGCAGAGCCAACTCACGCTTAGGGAGAACTCATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR TCA 72 bp CACACACACTTGGAGCTAGTGAGTCATGCTGGCAGCTaGCATTGTGACTCTGGAACAGCCCCGGTGCTCTGT +
Preference number: 3 (lower is better)
Translates to: HTHLELVSHAGS*HCDSGTAPVLC
Trigger: ACAGAGCACCGGGGCTGTTCCAGAGTCACAATGTCAGCTGCCAGCATGACTCACTAGCTCCAAGTGTGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR TCA 72 bp ACTCTTTGGATGGAACCAGTCCCGTTCCGTATGCTGTaGTCTATCCCTGCCGTGGAATTCCTCCGAGGCTCC +
Preference number: 3 (lower is better)
Translates to: TLWMEPVPFRML*SIPAVEFLRGS
Trigger: GGAGCCTCGGAGGAATTCCACGGCAGGGATAGATCACAGCATACGGAACGGGACTGGTTCCATCCAAAGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR GCA 72 bp GCACCACAGATCCTTCCCAGTACCATGGCTTTCACTTaGCCTCAGACACCCAGAGATCCCTGTCTCCCCATT +
Preference number: 3 (lower is better)
Translates to: APQILPSTMAFT*PQTPRDPCLPI
Trigger: AATGGGGAGACAGGGATCTCTGGGTGTCTGAGGGCAAGTGAAAGCCATGGTACTGGGAAGGATCTGTGGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR GCA 72 bp GTATCTTGTGGGCTGCGACTCCTGGAGTCGGACCACTaGAGCGTCAGTGATGTTCGTAAGCTATGGTTGAGC +
Preference number: 3 (lower is better)
Translates to: VSCGLRLLESDH*SVSDVRKLWLS
Trigger: GCTCAACCATAGCTTACGAACATCACTGACGCTGCAGTGGTCCGACTCCAGGAGTCGCAGCCCACAAGATAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR GCA 72 bp AGGCGGTATGAGTTCTCCCTAAGCGTGAGTTGGCTCTaGCCTGCACAGGCACCCAAACAGTCCTACCTAATG +
Preference number: 3 (lower is better)
Translates to: RRYEFSLSVSWL*PAQAPKQSYLM
Trigger: CATTAGGTAGGACTGTTTGGGTGCCTGTGCAGGGCAGAGCCAACTCACGCTTAGGGAGAACTCATACCGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR GCA 72 bp GGTTCACTCTTTGGATGGAACCAGTCCCGTTCCGTATaGTGTGATCTATCCCTGCCGTGGAATTCCTCCGAG +
Preference number: 3 (lower is better)
Translates to: GSLFGWNQSRSV*CDLSLPWNSSE
Trigger: CTCGGAGGAATTCCACGGCAGGGATAGATCACAGCATACGGAACGGGACTGGTTCCATCCAAAGAGTGAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR-3UTR CAA 90 bp CCTGCAGAGGCGGCTCGGAGTCCCGAGTCTTCTAGTCAGTTGAACAAGCATTCAAACAGACACACACACTaGGAGCTAGTGAGTCATGCT +
Preference number: 3 (lower is better)
Translates to: PAEAARSPESSSQLNKHSNRHTH*ELVSHA
Trigger: AGCATGACTCACTAGCTCCAAGTGTGTGTGTCTGTT...TGAATGCTTGTTCAACTGACTAGAAGACTCGGGACTCCGAGCCGCCTCTGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR-3UTR CAA 90 bp CTGCTTTCCAAAAGCATTGTGGTTCACTCTTTGGATGGAACCAGTCCCGTTCCGAGCCAGCAAAGTCTTTaGCATCGGGTGTGGCCCTTT +
Preference number: 3 (lower is better)
Translates to: LLSKSIVVHSLDGTSPVPSQQSL*HRVWPF
Trigger: AAAGGGCCACACCCGATGCAAAAGACTTTGCTGGCT...CGGAACGGGACTGGTTCCATCCAAAGAGTGAACCACAATGCTTTTGGAAAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR TCA 72 bp ACATGGTACAGTGTGGGAGACAGCACTAACACGTGCTaGATAACTACTGTGTACCAGGCACTGTGCTCGGTG +
Preference number: 3 (lower is better)
Translates to: TWYSVGDSTNTC*ITTVYQALCSV
Trigger: CACCGAGCACAGTGCCTGGTACACAGTAGTTATTCAGCACGTGTTAGTGCTGTCTCCCACACTGTACCATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR GCA 72 bp GATGGTGACATTCACTGGAGAATCCGTGGTTTCTTGTaGAGGATCCAAACCTGGGGTGGTGGTTGGTGTTTC +
Preference number: 3 (lower is better)
Translates to: DGDIHWRIRGFL*RIQTWGGGWCF
Trigger: GAAACACCAACCACCACCCCAGGTTTGGATCCTGCACAAGAAACCACGGATTCTCCAGTGAATGTCACCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640497.1
3UTR-3UTR CAA 90 bp TTTACTGTGCTCAGTGATCACGAAATTGGTCAAGCCTATTCATGTTCCTTCTCACTGGCGGGTCCCCCGTaGGCTTTCTTGCCGTTTCTT +
Preference number: 3 (lower is better)
Translates to: FTVLSDHEIGQAYSCSFSLAGPP*AFLPFL
Trigger: AAGAAACGGCAAGAAAGCCAACGGGGGACCCGCCAG...TGAGAAGGAACATGAATAGGCTTGACCAATTTCGTGATCACTGAGCACAGTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR TCA 72 bp ACCACTGCAGCGTCAGTGATGTTCGTAAGCTATGGTTaGGCAAAGGAACACACACCTACACACCTTGCTTCT +
Preference number: 3 (lower is better)
Translates to: TTAASVMFVSYG*AKEHTPTHLAS
Trigger: AGAAGCAAGGTGTGTAGGTGTGTGTTCCTTTGCTCAACCATAGCTTACGAACATCACTGACGCTGCAGTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR TCA 72 bp CAGAGGCGGCTCGGAGTCCCGAGTCTTCTAGTCAGTTaGACAAGCATTCATTTGTGTTTTCACCCAGATTAC +
Preference number: 3 (lower is better)
Translates to: QRRLGVPSLLVS*TSIHLCFHPDY
Trigger: GTAATCTGGGTGAAAACACAAATGAATGCTTGTTCAACTGACTAGAAGACTCGGGACTCCGAGCCGCCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR-3UTR CAA 90 bp AAGCATTCATTTGTGTTTTCACCCAGATTACAGACACACACACAAACAGACACACCTCTGCTCCGTATCTaGTGGGCTGCGACTCCTGGA +
Preference number: 3 (lower is better)
Translates to: KHSFVFSPRLQTHTQTDTPLLRI*WAATPG
Trigger: TCCAGGAGTCGCAGCCCACAAGATACGGAGCAGAGG...TGTGTCTGTTTGTGTGTGTGTCTGTAATCTGGGTGAAAACACAAATGAATGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR-3UTR CAA 90 bp CCATATTTAAATAAGCCTTCCTTAAACCCTAGCCCCAGTCCTGAGAGCTTTGAGCCCCCGTTGGCTTTCTaGCCGTTTCTTCTCATCTGT +
Preference number: 3 (lower is better)
Translates to: PYLNKPSLNPSPSPESFEPPLAF*PFLLIC
Trigger: ACAGATGAGAAGAAACGGCAAGAAAGCCAACGGGGG...CTCAAAGCTCTCAGGACTGGGGCTAGGGTTTAAGGAAGGCTTATTTAAATATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR-3UTR CAA 90 bp TATGAGTTCTCCCTAAGCGTGAGTTGGCTCTGCCCTGCACAGGCACCCAAACAGAGGGTGCAAGTTACATaGCAATGTTCTAAACCTTTT +
Preference number: 3 (lower is better)
Translates to: YEFSLSVSWLCPAQAPKQRVQVT*QCSKPF
Trigger: AAAAGGTTTAGAACATTGCAATGTAACTTGCACCCT...CTGTTTGGGTGCCTGTGCAGGGCAGAGCCAACTCACGCTTAGGGAGAACTCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR CCA 72 bp ACTGCTTTCCAAAAGCATTGTGGTTCACTCTTTGGATaGAACCAGTCCCGTTCCGTATGCTGTGATCTATCC +
Preference number: 3 (lower is better)
Translates to: TAFQKHCGSLFG*NQSRSVCCDLS
Trigger: GGATAGATCACAGCATACGGAACGGGACTGGTTCCATCCAAAGAGTGAACCACAATGCTTTTGGAAAGCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR TCA 72 bp TGTGGGAGTCGCAATGGAAGTAGCCCTCTATTGGCGTaGACATCAGCTCTGATTTATTTAGGAATTGCTCCA +
Preference number: 3 (lower is better)
Translates to: CGSRNGSSPLLA*TSALIYLGIAP
Trigger: TGGAGCAATTCCTAAATAAATCAGAGCTGATGTTCACGCCAATAGAGGGCTACTTCCATTGCGACTCCCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR GCA 72 bp GGAGCCATAATCTGGGCTCCTCCCATTTTTCCATACTaGTTTCCAAAAGCATTGTGGTTCACTCTTTGGATG +
Preference number: 3 (lower is better)
Translates to: GAIIWAPPIFPY*FPKALWFTLWM
Trigger: CATCCAAAGAGTGAACCACAATGCTTTTGGAAAGCAGTATGGAAAAATGGGAGGAGCCCAGATTATGGCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR CCA 72 bp CTCCCTGTTTGTACAACGCTGCTTATAGTTTGTGATTaGGGTGGGCGAATGTCTTCCTCTGAAATTCTTTGG +
Preference number: 3 (lower is better)
Translates to: LPVCTTLLIVCD*GGRMSSSEILW
Trigger: CCAAAGAATTTCAGAGGAAGACATTCGCCCACCCCAATCACAAACTATAAGCAGCGTTGTACAAACAGGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR-3UTR CAA 90 bp ACTGTTAACTCATTTAACCCCCACAACTCATCTACAAAGTTGGCATTAAAATCCTGTGGGTCCTCTTCCTaGTCCTGCCACCTCTGTCTT +
Preference number: 3 (lower is better)
Translates to: TVNSFNPHNSSTKLALKSCGSSS*SCHLCL
Trigger: AAGACAGAGGTGGCAGGACAAGGAAGAGGACCCACA...GGATTTTAATGCCAACTTTGTAGATGAGTTGTGGGGGTTAAATGAGTTAACAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR-3UTR CAA 90 bp ATTTTTCCATACTGCTTTCCAAAAGCATTGTGGTTCACTCTTTGGATGGAACCATACCATGGCTTTCACTaGCCCTCAGACACCCAGAGA +
Preference number: 3 (lower is better)
Translates to: IFPYCFPKALWFTLWMEPYHGFH*PSDTQR
Trigger: TCTCTGGGTGTCTGAGGGCAAGTGAAAGCCATGGTA...TGGTTCCATCCAAAGAGTGAACCACAATGCTTTTGGAAAGCAGTATGGAAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR-3UTR CAA 90 bp TTTACTGTGCTCAGTGATCACGAAATTGGTCAAGCCTATTCATGTTCCTTCTCATACACATCTCTAGGCTaGTCTGACCAGAAAGCCAGC +
Preference number: 3 (lower is better)
Translates to: FTVLSDHEIGQAYSCSFSYTSLG*SDQKAS
Trigger: GCTGGCTTTCTGGTCAGACAAGCCTAGAGATGTGTA...TGAGAAGGAACATGAATAGGCTTGACCAATTTCGTGATCACTGAGCACAGTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR GCA 72 bp TGGGTGTTTTTGTCGAATGAGTCTATGAAGACTCAATaGATCCATCTTGGGCTGATCATGCCACAGATCTCA +
Preference number: 3 (lower is better)
Translates to: WVFLSNESMKTQ*IHLGLIMPQIS
Trigger: TGAGATCTGTGGCATGATCAGCCCAAGATGGATGCATTGAGTCTTCATAGACTCATTCGACAAAAACACCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR-3UTR CAA 90 bp TTTACTGTGCTCAGTGATCACGAAATTGGTCAAGCCTATTCATGTTCCTTCTCAGTTCGTAAGCTATGGTaGAGCAAAGGAACACACACC +
Preference number: 3 (lower is better)
Translates to: FTVLSDHEIGQAYSCSFSVRKLW*SKGTHT
Trigger: GGTGTGTGTTCCTTTGCTCAACCATAGCTTACGAAC...TGAGAAGGAACATGAATAGGCTTGACCAATTTCGTGATCACTGAGCACAGTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR TCA 72 bp ACCTCCACCTGGAAATTTGATCTTTACTGTGCTCAGTaGTCACGAAATTGGTCAAGCCTATTCATGTTCCTT +
Preference number: 3 (lower is better)
Translates to: TSTWKFDLYCAQ*SRNWSSLFMFL
Trigger: AAGGAACATGAATAGGCTTGACCAATTTCGTGATCACTGAGCACAGTAAAGATCAAATTTCCAGGTGGAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR GCA 72 bp TCATCTAGAATTCTGTGTGATTGTTTTAGCATAAACTaGCCCGCTCCCACTGTATCATTTCACGATCTCCTT +
Preference number: 3 (lower is better)
Translates to: SSRILCDCFSIN*PAPTVSFHDLL
Trigger: AAGGAGATCGTGAAATGATACAGTGGGAGCGGGGCAGTTTATGCTAAAACAATCACACAGAATTCTAGATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR-3UTR CAA 90 bp TTTACTGTGCTCAGTGATCACGAAATTGGTCAAGCCTATTCATGTTCCTTCTCATCGGGTGTGGCCCTTTaGTATTTTATTTCCCATATT +
Preference number: 3 (lower is better)
Translates to: FTVLSDHEIGQAYSCSFSSGVAL*YFISHI
Trigger: AATATGGGAAATAAAATACAAAAGGGCCACACCCGA...TGAGAAGGAACATGAATAGGCTTGACCAATTTCGTGATCACTGAGCACAGTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR TCA 72 bp CACAGATCTCATTCCAGCTATAGTACTGCCAAGAAGTaGAGTTTATCATTGAATTTTACCTGTGTTGCTCTC +
Preference number: 3 (lower is better)
Translates to: HRSHSSYSTAKK*SLSLNFTCVAL
Trigger: GAGAGCAACACAGGTAAAATTCAATGATAAACTTCACTTCTTGGCAGTACTATAGCTGGAATGAGATCTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR-3UTR CAA 90 bp ACTGTTAACTCATTTAACCCCCACAACTCATCTACAAAGTTGGCATTAAAATCCTCTTTCTGGGTGTTTTaGTCGAATGAGTCTATGAAG +
Preference number: 3 (lower is better)
Translates to: TVNSFNPHNSSTKLALKSSFWVF*SNESMK
Trigger: CTTCATAGACTCATTCGACAAAAACACCCAGAAAGA...GGATTTTAATGCCAACTTTGTAGATGAGTTGTGGGGGTTAAATGAGTTAACAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR TCA 90 bp CCTCCGAGGCTCCAACTCCGCAGCCAGAGAAGCTGCTCTCTGGCCTCCGCGGGCCGGGTGGGGCTGGCCTaGGGCCCTCAGGTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: PPRLQLRSQRSCSLASAGRVGLA*GPQVQK
Trigger: CTTCTGCACCTGAGGGCCTCAGGCCAGCCCCACCCG...GCCCGCGGAGGCCAGAGAGCAGCTTCTCTGGCTGCGGAGTTGGAGCCTCGGAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR TCA 90 bp CCTCCGAGGCTCCAACTCCGCAGCCAGAGAAGCTGCTCTCTGGCCTCCGCGGGCGGGGTCCTGAGCAGGTaGGTGCCCCGGCAGGTGAAC +
Preference number: 4 (lower is better)
Translates to: PPRLQLRSQRSCSLASAGGVLSR*VPRQVN
Trigger: GTTCACCTGCCGGGGCACTCACCTGCTCAGGACCCC...GCCCGCGGAGGCCAGAGAGCAGCTTCTCTGGCTGCGGAGTTGGAGCCTCGGAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR CCA 90 bp CCTCCGAGGCTCCAACTCCGCAGCCAGAGAAGCTGCTCTCTGGCCTCCGCGGGCATGCCCAGGCGCAGCTaGGCACCCTCAGGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: PPRLQLRSQRSCSLASAGMPRRS*APSGCS
Trigger: GCTGCACCCTGAGGGTGCCCAGCTGCGCCTGGGCAT...GCCCGCGGAGGCCAGAGAGCAGCTTCTCTGGCTGCGGAGTTGGAGCCTCGGAGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR TCA 90 bp AGGCGCCACGTCCCTTGTGCTGGCGGGTCCCCCGTTGGCTTTCTTGCCGTTTCTAGGAGCTTGGGAGGATaGGGAGGAGCGGTCCCGCCT +
Preference number: 4 (lower is better)
Translates to: RRHVPCAGGSPVGFLAVSRSLGG*GGAVPP
Trigger: AGGCGGGACCGCTCCTCCTCATCCTCCCAAGCTCCT...AGAAACGGCAAGAAAGCCAACGGGGGACCCGCCAGCACAAGGGACGTGGCGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR GCA 90 bp AGGCGCCACGTCCCTTGTGCTGGCGGGTCCCCCGTTGGCTTTCTTGCCGTTTCTGCACTGGCCTTCCGCTaGACCAGGAAGCCCGTCAGG +
Preference number: 4 (lower is better)
Translates to: RRHVPCAGGSPVGFLAVSALAFR*TRKPVR
Trigger: CCTGACGGGCTTCCTGGTGCAGCGGAAGGCCAGTGC...AGAAACGGCAAGAAAGCCAACGGGGGACCCGCCAGCACAAGGGACGTGGCGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR CCA 90 bp AGGCGCCACGTCCCTTGTGCTGGCGGGTCCCCCGTTGGCTTTCTTGCCGTTTCTGCTTCCAGCTGGAGGTaGCAGTGGGGGTCAGGGGTC +
Preference number: 4 (lower is better)
Translates to: RRHVPCAGGSPVGFLAVSASSWR*QWGSGV
Trigger: GACCCCTGACCCCCACTGCCACCTCCAGCTGGAAGC...AGAAACGGCAAGAAAGCCAACGGGGGACCCGCCAGCACAAGGGACGTGGCGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR CCA 90 bp TGGGGGCGGGAAGCTACATCTGCAGTACCTCTGCTCCGTATCTTGTGGGCTGCGCCACGCCCCAGCTCCTaGGCCCAGGGCACTGGCCTT +
Preference number: 4 (lower is better)
Translates to: WGREATSAVPLLRILWAAPRPSS*AQGTGL
Trigger: AAGGCCAGTGCCCTGGGCCCAGGAGCTGGGGCGTGG...CGCAGCCCACAAGATACGGAGCAGAGGTACTGCAGATGTAGCTTCCCGCCCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR TCA 90 bp CCTCCGAGGCTCCAACTCCGCAGCCAGAGAAGCTGCTCTCTGGCCTCCGCGGGCCTAGGTGTGTCCGGTTaGCAGGGTCCAGCTGGAATA +
Preference number: 4 (lower is better)
Translates to: PPRLQLRSQRSCSLASAGLGVSG*QGPAGI
Trigger: TATTCCAGCTGGACCCTGTCAACCGGACACACCTAG...GCCCGCGGAGGCCAGAGAGCAGCTTCTCTGGCTGCGGAGTTGGAGCCTCGGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR GCA 90 bp CCTCCGAGGCTCCAACTCCGCAGCCAGAGAAGCTGCTCTCTGGCCTCCGCGGGCCTGGAGTCGGACCACTaGAGCGTCAGTGATGTTCGT +
Preference number: 4 (lower is better)
Translates to: PPRLQLRSQRSCSLASAGLESDH*SVSDVR
Trigger: ACGAACATCACTGACGCTGCAGTGGTCCGACTCCAG...GCCCGCGGAGGCCAGAGAGCAGCTTCTCTGGCTGCGGAGTTGGAGCCTCGGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR GCA 90 bp CCTCCGAGGCTCCAACTCCGCAGCCAGAGAAGCTGCTCTCTGGCCTCCGCGGGCCAGTCCCGTTCCGTATaGTGTGATCTATCCCTGCCG +
Preference number: 4 (lower is better)
Translates to: PPRLQLRSQRSCSLASAGQSRSV*CDLSLP
Trigger: CGGCAGGGATAGATCACAGCATACGGAACGGGACTG...GCCCGCGGAGGCCAGAGAGCAGCTTCTCTGGCTGCGGAGTTGGAGCCTCGGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR CCA 90 bp GGCAGGCCCACCTCCTCGGGGCAACTTTGCGTTTCCTTGGAGGGAAGGGAGGTGAGCCACGTCCAGCTGTaGGGCTTCCAGCTGGAGGTG +
Preference number: 4 (lower is better)
Translates to: GRPTSSGQLCVSLEGREVSHVQL*GFQLEV
Trigger: CACCTCCAGCTGGAAGCCCCACAGCTGGACGTGGCT...CACCTCCCTTCCCTCCAAGGAAACGCAAAGTTGCCCCGAGGAGGTGGGCCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR TCA 90 bp TGGGGGCGGGAAGCTACATCTGCAGTACCTCTGCTCCGTATCTTGTGGGCTGCGGCTGGCCAGTGCAGGTaGAGACGCTGCCACTGGGGA +
Preference number: 4 (lower is better)
Translates to: WGREATSAVPLLRILWAAAGQCR*RRCHWG
Trigger: TCCCCAGTGGCAGCGTCTTCACCTGCACTGGCCAGC...CGCAGCCCACAAGATACGGAGCAGAGGTACTGCAGATGTAGCTTCCCGCCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR TCA 90 bp TGGGGGCGGGAAGCTACATCTGCAGTACCTCTGCTCCGTATCTTGTGGGCTGCGTGGGCCTGCAGGAGGTaGACGGCCATCGAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: WGREATSAVPLLRILWAAWACRR*TAIEEL
Trigger: CAGCTCCTCGATGGCCGTTCACCTCCTGCAGGCCCA...CGCAGCCCACAAGATACGGAGCAGAGGTACTGCAGATGTAGCTTCCCGCCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR GCA 90 bp GGCAGGCCCACCTCCTCGGGGCAACTTTGCGTTTCCTTGGAGGGAAGGGAGGTGGGAAGGCCCCGTCACTaGTCAGCCTGTTCACGGAGT +
Preference number: 4 (lower is better)
Translates to: GRPTSSGQLCVSLEGREVGRPRH*SACSRS
Trigger: ACTCCGTGAACAGGCTGAGCAGTGACGGGGCCTTCC...CACCTCCCTTCCCTCCAAGGAAACGCAAAGTTGCCCCGAGGAGGTGGGCCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR CCA 90 bp CCTGCAGAGGCGGCTCGGAGTCCCGAGTCTTCTAGTCAGTTGAACAAGCATTCACAAGCCAGCCCAGCGTaGCAGGGGGCTCGCCGCCAG +
Preference number: 4 (lower is better)
Translates to: PAEAARSPESSSQLNKHSQASPA*QGARRQ
Trigger: CTGGCGGCGAGCCCCCTGCCACGCTGGGCTGGCTTG...TGAATGCTTGTTCAACTGACTAGAAGACTCGGGACTCCGAGCCGCCTCTGCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR CCA 90 bp ACCAGTCCCGTTCCGTATGCTGTGATCTATCCCTGCCGTGGAATTCCTCCGAGGAGCCCCGGTGCTCTGTaGGCCAGCTCCCCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: TSPVPYAVIYPCRGIPPRSPGAL*ASSPSL
Trigger: CAGGCTGGGGGAGCTGGCCCACAGAGCACCGGGGCT...CCTCGGAGGAATTCCACGGCAGGGATAGATCACAGCATACGGAACGGGACTGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR TCA 90 bp GGCAGGCCCACCTCCTCGGGGCAACTTTGCGTTTCCTTGGAGGGAAGGGAGGTGTGGCAGCTGACATTGTaGCTCTGGAACAGCCCCGGT +
Preference number: 4 (lower is better)
Translates to: GRPTSSGQLCVSLEGREVWQLTL*LWNSPG
Trigger: ACCGGGGCTGTTCCAGAGTCACAATGTCAGCTGCCA...CACCTCCCTTCCCTCCAAGGAAACGCAAAGTTGCCCCGAGGAGGTGGGCCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR GCA 90 bp AGCTGCTCTCTGGCCTCCGCGGGCAGAGCTCTGCTTATGACTTCGTCTTCCAGACCTCGGGGTGCCCGATaGTGCCAGGCAAAGGTCACG +
Preference number: 4 (lower is better)
Translates to: SCSLASAGRALLMTSSSRPRGAR*CQAKVT
Trigger: CGTGACCTTTGCCTGGCAGCATCGGGCACCCCGAGG...TCTGGAAGACGAAGTCATAAGCAGAGCTCTGCCCGCGGAGGCCAGAGAGCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR GCA 90 bp CCTGAAACTCCCCTGTGCACACCCCTCTGTTCTGACTGCAGAGATCAAGGCCCTCCGCCCAGGGGCTGCTaGTGTTCGTCAAGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: PETPLCTPLCSDCRDQGPPPRGC*CSSSQP
Trigger: GGGCTGGCTTGACGAACAGCAGCAGCCCCTGGGCGG...AGGGCCTTGATCTCTGCAGTCAGAACAGAGGGGTGTGCACAGGGGAGTTTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR CCA 90 bp CCTGAAACTCCCCTGTGCACACCCCTCTGTTCTGACTGCAGAGATCAAGGCCCTCTGGGCCCAGGGCACTaGCCTTCCGCTGCACCAGGA +
Preference number: 4 (lower is better)
Translates to: PETPLCTPLCSDCRDQGPLGPGH*PSAAPG
Trigger: TCCTGGTGCAGCGGAAGGCCAGTGCCCTGGGCCCAG...AGGGCCTTGATCTCTGCAGTCAGAACAGAGGGGTGTGCACAGGGGAGTTTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR CCA 90 bp CCTCCGAGGCTCCAACTCCGCAGCCAGAGAAGCTGCTCTCTGGCCTCCGCGGGCGAAGGAGCAGGATCTTaGGCAAGTGTTTTAGGGGAC +
Preference number: 4 (lower is better)
Translates to: PPRLQLRSQRSCSLASAGEGAGS*ASVLGD
Trigger: GTCCCCTAAAACACTTGCCCAAGATCCTGCTCCTTC...GCCCGCGGAGGCCAGAGAGCAGCTTCTCTGGCTGCGGAGTTGGAGCCTCGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR TCA 90 bp CCTCCGAGGCTCCAACTCCGCAGCCAGAGAAGCTGCTCTCTGGCCTCCGCGGGCCACTTCACCAGGAAATaGGAGGACATGGTACAGTGT +
Preference number: 4 (lower is better)
Translates to: PPRLQLRSQRSCSLASAGHFTRK*EDMVQC
Trigger: ACACTGTACCATGTCCTCTCATTTCCTGGTGAAGTG...GCCCGCGGAGGCCAGAGAGCAGCTTCTCTGGCTGCGGAGTTGGAGCCTCGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR GCA 90 bp TATGAGTTCTCCCTAAGCGTGAGTTGGCTCTGCCCTGCACAGGCACCCAAACAGCGGGGTGCCCGATGCTaGCAGGCAAAGGTCACGGGC +
Preference number: 4 (lower is better)
Translates to: YEFSLSVSWLCPAQAPKQRGARC*QAKVTG
Trigger: GCCCGTGACCTTTGCCTGGCAGCATCGGGCACCCCG...CTGTTTGGGTGCCTGTGCAGGGCAGAGCCAACTCACGCTTAGGGAGAACTCATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR GCA 90 bp ACCAGTCCCGTTCCGTATGCTGTGATCTATCCCTGCCGTGGAATTCCTCCGAGGGGCCCCGTGTGGACTTaGGTGTGGTCACGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: TSPVPYAVIYPCRGIPPRGPVWT*VWSRSH
Trigger: GTGGCTCCGTGACCACACGCAAGTCCACACGGGGCC...CCTCGGAGGAATTCCACGGCAGGGATAGATCACAGCATACGGAACGGGACTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR GCA 90 bp CCTGCAGAGGCGGCTCGGAGTCCCGAGTCTTCTAGTCAGTTGAACAAGCATTCACCATCGAGGAGCTGCTaGCGCCCAGGGGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: PAEAARSPESSSQLNKHSPSRSC*RPGAAA
Trigger: AGCAGCAGCCCCTGGGCGGCAGCAGCTCCTCGATGG...TGAATGCTTGTTCAACTGACTAGAAGACTCGGGACTCCGAGCCGCCTCTGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR GCA 90 bp TACCATGGCTTTCACTTGCCCTCAGACACCCAGAGATCCCTGTCTCCCCATTGTCGGCCATCGAGGAGCTaGTGCCGCCCAGGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: YHGFHLPSDTQRSLSPHCRPSRS*CRPGAA
Trigger: AGCAGCCCCTGGGCGGCAGCAGCTCCTCGATGGCCG...ACAATGGGGAGACAGGGATCTCTGGGTGTCTGAGGGCAAGTGAAAGCCATGGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR CCA 90 bp GGCAGGCCCACCTCCTCGGGGCAACTTTGCGTTTCCTTGGAGGGAAGGGAGGTGTGTTCACGGAGTTGCTaGCGCTGCACATGTACCACC +
Preference number: 4 (lower is better)
Translates to: GRPTSSGQLCVSLEGREVCSRSC*RCTCTT
Trigger: GGTGGTACATGTGCAGCGCCAGCAACTCCGTGAACA...CACCTCCCTTCCCTCCAAGGAAACGCAAAGTTGCCCCGAGGAGGTGGGCCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR CCA 90 bp CCTCCGAGGCTCCAACTCCGCAGCCAGAGAAGCTGCTCTCTGGCCTCCGCGGGCTCACTGGAGAATCCGTaGTTTCTTGTGCAGGATCCA +
Preference number: 4 (lower is better)
Translates to: PPRLQLRSQRSCSLASAGSLENP*FLVQDP
Trigger: TGGATCCTGCACAAGAAACCACGGATTCTCCAGTGA...GCCCGCGGAGGCCAGAGAGCAGCTTCTCTGGCTGCGGAGTTGGAGCCTCGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR CAA 72 bp TCAGGCGCCACGTCCCTTGTGCTGGCGGGTCCCCCGTaGGCTTTCTTGCCGTTTCTTCTCATCTGTGTCTCC +
Preference number: 4 (lower is better)
Translates to: SGATSLVLAGPP*AFLPFLLICVS
Trigger: GGAGACACAGATGAGAAGAAACGGCAAGAAAGCCAACGGGGGACCCGCCAGCACAAGGGACGTGGCGCCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR TCA 90 bp CCTGCAGAGGCGGCTCGGAGTCCCGAGTCTTCTAGTCAGTTGAACAAGCATTCAAGCTGGGCGGCTGCGTaGCTCCAGGTGACGTTGCTG +
Preference number: 4 (lower is better)
Translates to: PAEAARSPESSSQLNKHSSWAAA*LQVTLL
Trigger: CAGCAACGTCACCTGGAGTCACGCAGCCGCCCAGCT...TGAATGCTTGTTCAACTGACTAGAAGACTCGGGACTCCGAGCCGCCTCTGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR TCA 90 bp TGGGGGCGGGAAGCTACATCTGCAGTACCTCTGCTCCGTATCTTGTGGGCTGCGCCCCAAGTCACTCAGTaGGCCATGGGACCTGAATCC +
Preference number: 4 (lower is better)
Translates to: WGREATSAVPLLRILWAAPQVTQ*AMGPES
Trigger: GGATTCAGGTCCCATGGCTCACTGAGTGACTTGGGG...CGCAGCCCACAAGATACGGAGCAGAGGTACTGCAGATGTAGCTTCCCGCCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR GCA 90 bp TATGAGTTCTCCCTAAGCGTGAGTTGGCTCTGCCCTGCACAGGCACCCAAACAGTGTGCCCTCCCGCACTaGACACGTGGCCACCACGGA +
Preference number: 4 (lower is better)
Translates to: YEFSLSVSWLCPAQAPKQCALPH*TRGHHG
Trigger: TCCGTGGTGGCCACGTGTGCAGTGCGGGAGGGCACA...CTGTTTGGGTGCCTGTGCAGGGCAGAGCCAACTCACGCTTAGGGAGAACTCATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR GCA 90 bp CCTGCAGAGGCGGCTCGGAGTCCCGAGTCTTCTAGTCAGTTGAACAAGCATTCAGGTGCCAGGGCTGGGTaGTGGCCAGTGCAGGTGAAG +
Preference number: 4 (lower is better)
Translates to: PAEAARSPESSSQLNKHSGARAG*WPVQVK
Trigger: CTTCACCTGCACTGGCCAGCACCCAGCCCTGGCACC...TGAATGCTTGTTCAACTGACTAGAAGACTCGGGACTCCGAGCCGCCTCTGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR GCA 90 bp ACATTCACTGGAGAATCCGTGGTTTCTTGTGCAGGATCCAAACCTGGGGTGGTGCGGCCATCGAGGAGCTaGTGCCGCCCAGGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: TFTGESVVSCAGSKPGVVRPSRS*CRPGAA
Trigger: AGCAGCCCCTGGGCGGCAGCAGCTCCTCGATGGCCG...CACCACCCCAGGTTTGGATCCTGCACAAGAAACCACGGATTCTCCAGTGAATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640497.1
CDS-3UTR GCA 90 bp CCTGAAACTCCCCTGTGCACACCCCTCTGTTCTGACTGCAGAGATCAAGGCCCTCCACGCATTGGTAGGTaGCCCTGTGGTGTGCCGGGT +
Preference number: 4 (lower is better)
Translates to: PETPLCTPLCSDCRDQGPPRIGR*PCGVPG
Trigger: ACCCGGCACACCACAGGGGCACCTACCAATGCGTGG...AGGGCCTTGATCTCTGCAGTCAGAACAGAGGGGTGTGCACAGGGGAGTTTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR GCA 90 bp CTGTCTTCCACAAGGTGGGCCAGGGCTTCTCTTGTAACCATGTCACTTAGGGACCTGGAACAGCCCCGGTaGTCTGTGGGCCAGCTCCCC +
Preference number: 4 (lower is better)
Translates to: LSSTRWARASLVTMSLRDLEQPR*SVGQLP
Trigger: GGGGAGCTGGCCCACAGAGCACCGGGGCTGTTCCAG...GTCCCTAAGTGACATGGTTACAAGAGAAGCCCTGGCCCACCTTGTGGAAGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR GCA 90 bp TGGGGGCGGGAAGCTACATCTGCAGTACCTCTGCTCCGTATCTTGTGGGCTGCGAGCGTGAGTTGGCTCTaGCCTGCACAGGCACCCAAA +
Preference number: 4 (lower is better)
Translates to: WGREATSAVPLLRILWAASVSWL*PAQAPK
Trigger: TTTGGGTGCCTGTGCAGGGCAGAGCCAACTCACGCT...CGCAGCCCACAAGATACGGAGCAGAGGTACTGCAGATGTAGCTTCCCGCCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR CCA 90 bp CCTGCAGAGGCGGCTCGGAGTCCCGAGTCTTCTAGTCAGTTGAACAAGCATTCACAGCAGGAGGCTGACTaGGCTGTGCTGGGCCCTCTG +
Preference number: 4 (lower is better)
Translates to: PAEAARSPESSSQLNKHSQQEAD*AVLGPL
Trigger: CAGAGGGCCCAGCACAGCCCAGTCAGCCTCCTGCTG...TGAATGCTTGTTCAACTGACTAGAAGACTCGGGACTCCGAGCCGCCTCTGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR CCA 90 bp ACCAGTCCCGTTCCGTATGCTGTGATCTATCCCTGCCGTGGAATTCCTCCGAGGCCAGAGCCGAGGCGATaGCCTCCACCTTGGACATGG +
Preference number: 4 (lower is better)
Translates to: TSPVPYAVIYPCRGIPPRPEPRR*PPPWTW
Trigger: CCATGTCCAAGGTGGAGGCCATCGCCTCGGCTCTGG...CCTCGGAGGAATTCCACGGCAGGGATAGATCACAGCATACGGAACGGGACTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR CCA 90 bp AGCTGCTCTCTGGCCTCCGCGGGCAGAGCTCTGCTTATGACTTCGTCTTCCAGACCTCTTCCCTCTCACTaGCCCAGAAGCCCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: SCSLASAGRALLMTSSSRPLPSH*PRSPPQ
Trigger: CTGAGGAGGGCTTCTGGGCCAGTGAGAGGGAAGAGG...TCTGGAAGACGAAGTCATAAGCAGAGCTCTGCCCGCGGAGGCCAGAGAGCAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR CCA 90 bp TATGAGTTCTCCCTAAGCGTGAGTTGGCTCTGCCCTGCACAGGCACCCAAACAGAGCTGGAGGTGGCAGTaGGGGTCAGGGGTCCTGAGC +
Preference number: 4 (lower is better)
Translates to: YEFSLSVSWLCPAQAPKQSWRWQ*GSGVLS
Trigger: GCTCAGGACCCCTGACCCCCACTGCCACCTCCAGCT...CTGTTTGGGTGCCTGTGCAGGGCAGAGCCAACTCACGCTTAGGGAGAACTCATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR CAA 72 bp CGGGAAGCTACATCTGCAGTACCTCTGCTCCGTATCTaGTGGGCTGCGACTCCTGGAGTCGGACCACTGCAG +
Preference number: 4 (lower is better)
Translates to: REATSAVPLLRI*WAATPGVGPLQ
Trigger: CTGCAGTGGTCCGACTCCAGGAGTCGCAGCCCACAAGATACGGAGCAGAGGTACTGCAGATGTAGCTTCCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR CAA 72 bp ACGTCCCTTGTGCTGGCGGGTCCCCCGTTGGCTTTCTaGCCGTTTCTTCTCATCTGTGTCTCCTGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: TSLVLAGPPLAF*PFLLICVSCRG
Trigger: GCCTCTGCAGGAGACACAGATGAGAAGAAACGGCAAGAAAGCCAACGGGGGACCCGCCAGCACAAGGGACGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR TCA 90 bp TATGAGTTCTCCCTAAGCGTGAGTTGGCTCTGCCCTGCACAGGCACCCAAACAGAGAAGCCCTCCTCAGTaGGTCCCAGCGGCTCCATGG +
Preference number: 4 (lower is better)
Translates to: YEFSLSVSWLCPAQAPKQRSPPQ*VPAAPW
Trigger: CCATGGAGCCGCTGGGACTCACTGAGGAGGGCTTCT...CTGTTTGGGTGCCTGTGCAGGGCAGAGCCAACTCACGCTTAGGGAGAACTCATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR TCA 90 bp CCTGCAGAGGCGGCTCGGAGTCCCGAGTCTTCTAGTCAGTTGAACAAGCATTCAGAGTGCCCCGGCAGGTaGACTCTCTGCCAGCCAGAT +
Preference number: 4 (lower is better)
Translates to: PAEAARSPESSSQLNKHSECPGR*TLCQPD
Trigger: ATCTGGCTGGCAGAGAGTTCACCTGCCGGGGCACTC...TGAATGCTTGTTCAACTGACTAGAAGACTCGGGACTCCGAGCCGCCTCTGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR TCA 90 bp GGCAGGCCCACCTCCTCGGGGCAACTTTGCGTTTCCTTGGAGGGAAGGGAGGTGGCTGCTTATAGTTTGTaGTTGGGGTGGGCGAATGTC +
Preference number: 4 (lower is better)
Translates to: GRPTSSGQLCVSLEGREVAAYSL*LGWANV
Trigger: GACATTCGCCCACCCCAATCACAAACTATAAGCAGC...CACCTCCCTTCCCTCCAAGGAAACGCAAAGTTGCCCCGAGGAGGTGGGCCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR TCA 90 bp CCTGAAACTCCCCTGTGCACACCCCTCTGTTCTGACTGCAGAGATCAAGGCCCTCCACATTTCTCCCCTTaGCGCCCCCTGTCTACCACC +
Preference number: 4 (lower is better)
Translates to: PETPLCTPLCSDCRDQGPPHFSP*RPLSTT
Trigger: GGTGGTAGACAGGGGGCGTCAAGGGGAGAAATGTGG...AGGGCCTTGATCTCTGCAGTCAGAACAGAGGGGTGTGCACAGGGGAGTTTCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR GCA 90 bp AGCTGCTCTCTGGCCTCCGCGGGCAGAGCTCTGCTTATGACTTCGTCTTCCAGAGCCTGTTCACGGAGTTaGTGGCGCTGCACATGTACC +
Preference number: 4 (lower is better)
Translates to: SCSLASAGRALLMTSSSRACSRS*WRCTCT
Trigger: GGTACATGTGCAGCGCCAGCAACTCCGTGAACAGGC...TCTGGAAGACGAAGTCATAAGCAGAGCTCTGCCCGCGGAGGCCAGAGAGCAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR GCA 90 bp AGCTGCTCTCTGGCCTCCGCGGGCAGAGCTCTGCTTATGACTTCGTCTTCCAGAGCAGCACACTCTGACTaGTATTGCCCACGGCGTTGC +
Preference number: 4 (lower is better)
Translates to: SCSLASAGRALLMTSSSRAAHSD*YCPRRC
Trigger: GCAACGCCGTGGGCAATAGCAGTCAGAGTGTGCTGC...TCTGGAAGACGAAGTCATAAGCAGAGCTCTGCCCGCGGAGGCCAGAGAGCAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR GCA 90 bp CCTCCGAGGCTCCAACTCCGCAGCCAGAGAAGCTGCTCTCTGGCCTCCGCGGGCTCTATGAAGACTCAATaGATCCATCTTGGGCTGATC +
Preference number: 4 (lower is better)
Translates to: PPRLQLRSQRSCSLASAGSMKTQ*IHLGLI
Trigger: GATCAGCCCAAGATGGATGCATTGAGTCTTCATAGA...GCCCGCGGAGGCCAGAGAGCAGCTTCTCTGGCTGCGGAGTTGGAGCCTCGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR CCA 90 bp TGTTGCAGTCACTGTGATGGTGACATTCACTGGAGAATCCGTGGTTTCTTGTGCCAAGCCAGCCCAGCGTaGCAGGGGGCTCGCCGCCAG +
Preference number: 4 (lower is better)
Translates to: CCSHCDGDIHWRIRGFLCQASPA*QGARRQ
Trigger: CTGGCGGCGAGCCCCCTGCCACGCTGGGCTGGCTTG...GCACAAGAAACCACGGATTCTCCAGTGAATGTCACCATCACAGTGACTGCAACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000640497.1
CDS-3UTR CCA 90 bp ACCAGTCCCGTTCCGTATGCTGTGATCTATCCCTGCCGTGGAATTCCTCCGAGGCCCACTAGCCAAACCTaGGACCCAGCCATCAGCCTG +
Preference number: 4 (lower is better)
Translates to: TSPVPYAVIYPCRGIPPRPTSQT*DPAISL
Trigger: CAGGCTGATGGCTGGGTCCCAGGTTTGGCTAGTGGG...CCTCGGAGGAATTCCACGGCAGGGATAGATCACAGCATACGGAACGGGACTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR CCA 90 bp AGGCGCCACGTCCCTTGTGCTGGCGGGTCCCCCGTTGGCTTTCTTGCCGTTTCTGGTTCACTCTTTGGATaGAACCAGTCCCGTTCCGTA +
Preference number: 4 (lower is better)
Translates to: RRHVPCAGGSPVGFLAVSGSLFG*NQSRSV
Trigger: TACGGAACGGGACTGGTTCCATCCAAAGAGTGAACC...AGAAACGGCAAGAAAGCCAACGGGGGACCCGCCAGCACAAGGGACGTGGCGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR TCA 90 bp CATTCACTGGAGAATCCGTGGTTTCTTGTGCAGGATCCAAACCTGGGGTGGTGGGAGTGCCCCGGCAGGTaGACTCTCTGCCAGCCAGAT +
Preference number: 4 (lower is better)
Translates to: HSLENPWFLVQDPNLGWWECPGR*TLCQPD
Trigger: ATCTGGCTGGCAGAGAGTTCACCTGCCGGGGCACTC...CCACCACCCCAGGTTTGGATCCTGCACAAGAAACCACGGATTCTCCAGTGAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640497.1
CDS-3UTR TCA 90 bp AGCTGCTCTCTGGCCTCCGCGGGCAGAGCTCTGCTTATGACTTCGTCTTCCAGACCGTTCCGTATGCTGTaGTCTATCCCTGCCGTGGAA +
Preference number: 4 (lower is better)
Translates to: SCSLASAGRALLMTSSSRPFRML*SIPAVE
Trigger: TTCCACGGCAGGGATAGATCACAGCATACGGAACGG...TCTGGAAGACGAAGTCATAAGCAGAGCTCTGCCCGCGGAGGCCAGAGAGCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR GCA 90 bp ACATTCACTGGAGAATCCGTGGTTTCTTGTGCAGGATCCAAACCTGGGGTGGTGCTGCCGCCCAGGGGCTaGTGCTGTTCGTCAAGCCAG +
Preference number: 4 (lower is better)
Translates to: TFTGESVVSCAGSKPGVVLPPRG*CCSSSQ
Trigger: CTGGCTTGACGAACAGCAGCAGCCCCTGGGCGGCAG...CACCACCCCAGGTTTGGATCCTGCACAAGAAACCACGGATTCTCCAGTGAATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640497.1
CDS-3UTR GCA 90 bp AGCTGCTCTCTGGCCTCCGCGGGCAGAGCTCTGCTTATGACTTCGTCTTCCAGATGGGCACCCTCAGGGTaGAGCATGAATCCTGAAGTG +
Preference number: 4 (lower is better)
Translates to: SCSLASAGRALLMTSSSRWAPSG*SMNPEV
Trigger: CACTTCAGGATTCATGCTGCACCCTGAGGGTGCCCA...TCTGGAAGACGAAGTCATAAGCAGAGCTCTGCCCGCGGAGGCCAGAGAGCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR GCA 90 bp TACCATGGCTTTCACTTGCCCTCAGACACCCAGAGATCCCTGTCTCCCCATTGTGGTCAGCATCGTAGATaGCCAGGCGCAGCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: YHGFHLPSDTQRSLSPHCGQHRR*PGAAGH
Trigger: GTGCCCAGCTGCGCCTGGGCATCTACGATGCTGACC...ACAATGGGGAGACAGGGATCTCTGGGTGTCTGAGGGCAAGTGAAAGCCATGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR GCA 90 bp TATGAGTTCTCCCTAAGCGTGAGTTGGCTCTGCCCTGCACAGGCACCCAAACAGGGTGCCCCTGTGGTGTaGCGGGTCAGCATCGTAGAT +
Preference number: 4 (lower is better)
Translates to: YEFSLSVSWLCPAQAPKQGAPVV*RVSIVD
Trigger: ATCTACGATGCTGACCCGGCACACCACAGGGGCACC...CTGTTTGGGTGCCTGTGCAGGGCAGAGCCAACTCACGCTTAGGGAGAACTCATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR GCA 90 bp TATGAGTTCTCCCTAAGCGTGAGTTGGCTCTGCCCTGCACAGGCACCCAAACAGTATTGCCCACGGCGTTaGGGGCCACGCATTGGTAGG +
Preference number: 4 (lower is better)
Translates to: YEFSLSVSWLCPAQAPKQYCPRR*GPRIGR
Trigger: CCTACCAATGCGTGGCCCGCAACGCCGTGGGCAATA...CTGTTTGGGTGCCTGTGCAGGGCAGAGCCAACTCACGCTTAGGGAGAACTCATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR GCA 90 bp CCTGCAGAGGCGGCTCGGAGTCCCGAGTCTTCTAGTCAGTTGAACAAGCATTCACTCGATGTCACTAGCTaGTGTCTCCCACGCCCCAGC +
Preference number: 4 (lower is better)
Translates to: PAEAARSPESSSQLNKHSLDVTS*CLPRPS
Trigger: GCTGGGGCGTGGGAGACAGCAGCTAGTGACATCGAG...TGAATGCTTGTTCAACTGACTAGAAGACTCGGGACTCCGAGCCGCCTCTGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR GCA 90 bp TACCATGGCTTTCACTTGCCCTCAGACACCCAGAGATCCCTGTCTCCCCATTGTCACCATTCCCGTGCCTaGTGCACCCAACACCGCTGG +
Preference number: 4 (lower is better)
Translates to: YHGFHLPSDTQRSLSPHCHHSRA*CTQHRW
Trigger: CCAGCGGTGTTGGGTGCAGCAGGCACGGGAATGGTG...ACAATGGGGAGACAGGGATCTCTGGGTGTCTGAGGGCAAGTGAAAGCCATGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR CCA 90 bp GGCAGGCCCACCTCCTCGGGGCAACTTTGCGTTTCCTTGGAGGGAAGGGAGGTGCCTCTTTGGGCCTTATaGTGTTGCAGTCACTGTGAT +
Preference number: 4 (lower is better)
Translates to: GRPTSSGQLCVSLEGREVPLWAL*CCSHCD
Trigger: ATCACAGTGACTGCAACACCATAAGGCCCAAAGAGG...CACCTCCCTTCCCTCCAAGGAAACGCAAAGTTGCCCCGAGGAGGTGGGCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR CAA 72 bp TCTCAATTTTCTGTCTCCTTTCAGGCGCCACGTCCCTaGTGCTGGCGGGTCCCCCGTTGGCTTTCTTGCCGT +
Preference number: 4 (lower is better)
Translates to: SQFSVSFQAPRP*CWRVPRWLSCR
Trigger: ACGGCAAGAAAGCCAACGGGGGACCCGCCAGCACAAGGGACGTGGCGCCTGAAAGGAGACAGAAAATTGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR TCA 90 bp GCTATGGTTGAGCAAAGGAACACACACCTACACACCTTGCTTCTTCCCACTAGCCCAGCACAGCCAGCGTaGGGTGGGAGTAGGCAGCGT +
Preference number: 4 (lower is better)
Translates to: AMVEQRNTHLHTLLLPTSPAQPA*GGSRQR
Trigger: ACGCTGCCTACTCCCACCTCACGCTGGCTGTGCTGG...GCTAGTGGGAAGAAGCAAGGTGTGTAGGTGTGTGTTCCTTTGCTCAACCATAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR TCA 90 bp CACTGCAGCGTCAGTGATGTTCGTAAGCTATGGTTGAGCAAAGGAACACACACCGAGGCTCCCAGAGCATaGCTGTGCAGAGGGCAGGCG +
Preference number: 4 (lower is better)
Translates to: HCSVSDVRKLWLSKGTHTEAPRA*LCRGQA
Trigger: CGCCTGCCCTCTGCACAGTCATGCTCTGGGAGCCTC...GGTGTGTGTTCCTTTGCTCAACCATAGCTTACGAACATCACTGACGCTGCAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR TCA 90 bp AGTCACTGTGATGGTGACATTCACTGGAGAATCCGTGGTTTCTTGTGCAGGATCGGGGTCCTGAGCAGGTaGGTGCCCCGGCAGGTGAAC +
Preference number: 4 (lower is better)
Translates to: SHCDGDIHWRIRGFLCRIGVLSR*VPRQVN
Trigger: GTTCACCTGCCGGGGCACTCACCTGCTCAGGACCCC...GATCCTGCACAAGAAACCACGGATTCTCCAGTGAATGTCACCATCACAGTGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640497.1
CDS-3UTR TCA 90 bp GGCAGGCCCACCTCCTCGGGGCAACTTTGCGTTTCCTTGGAGGGAAGGGAGGTGTTTATGACCAAAGTCTaGCAGAAGGGCTCTTCCCAA +
Preference number: 4 (lower is better)
Translates to: GRPTSSGQLCVSLEGREVFMTKV*QKGSSQ
Trigger: TTGGGAAGAGCCCTTCTGTCAGACTTTGGTCATAAA...CACCTCCCTTCCCTCCAAGGAAACGCAAAGTTGCCCCGAGGAGGTGGGCCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR GCA 90 bp TACCATGGCTTTCACTTGCCCTCAGACACCCAGAGATCCCTGTCTCCCCATTGTCCCCCAGCACCAGGCTaGTGTTCCTCAGACTCACGA +
Preference number: 4 (lower is better)
Translates to: YHGFHLPSDTQRSLSPHCPPAPG*CSSDSR
Trigger: TCGTGAGTCTGAGGAACAGCAGCCTGGTGCTGGGGG...ACAATGGGGAGACAGGGATCTCTGGGTGTCTGAGGGCAAGTGAAAGCCATGGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR GCA 90 bp CACTGTGATGGTGACATTCACTGGAGAATCCGTGGTTTCTTGTGCAGGATCCAACCGCCCAGGGGCTGCTaGTGTTCGTCAAGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: HCDGDIHWRIRGFLCRIQPPRGC*CSSSQP
Trigger: GGGCTGGCTTGACGAACAGCAGCAGCCCCTGGGCGG...TTGGATCCTGCACAAGAAACCACGGATTCTCCAGTGAATGTCACCATCACAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640497.1
CDS-3UTR GCA 90 bp CACTGTGATGGTGACATTCACTGGAGAATCCGTGGTTTCTTGTGCAGGATCCAACCATCGAGGAGCTGCTaGCGCCCAGGGGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: HCDGDIHWRIRGFLCRIQPSRSC*RPGAAA
Trigger: AGCAGCAGCCCCTGGGCGGCAGCAGCTCCTCGATGG...TTGGATCCTGCACAAGAAACCACGGATTCTCCAGTGAATGTCACCATCACAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640497.1
CDS-3UTR GCA 90 bp TACCATGGCTTTCACTTGCCCTCAGACACCCAGAGATCCCTGTCTCCCCATTGTCTACCACCATTCCCGTaGCTGCTGCACCCAACACCG +
Preference number: 4 (lower is better)
Translates to: YHGFHLPSDTQRSLSPHCLPPFP*LLHPTP
Trigger: CGGTGTTGGGTGCAGCAGGCACGGGAATGGTGGTAG...ACAATGGGGAGACAGGGATCTCTGGGTGTCTGAGGGCAAGTGAAAGCCATGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR GCA 90 bp CTGTCTTCCACAAGGTGGGCCAGGGCTTCTCTTGTAACCATGTCACTTAGGGACCCGTATCTTGTGGGCTaGGACTCCTGGAGTCGGACC +
Preference number: 4 (lower is better)
Translates to: LSSTRWARASLVTMSLRDPYLVG*DSWSRT
Trigger: GGTCCGACTCCAGGAGTCGCAGCCCACAAGATACGG...GTCCCTAAGTGACATGGTTACAAGAGAAGCCCTGGCCCACCTTGTGGAAGACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR GCA 90 bp ATAGCCCCTGAAGGTGGGAATACTCCCTGTTTGTACAACGCTGCTTATAGTTTGGCGCCACGTCCCTTGTaGTGGCGGGTCCCCCGTTGG +
Preference number: 4 (lower is better)
Translates to: IAPEGGNTPCLYNAAYSLAPRPL*WRVPRW
Trigger: CCAACGGGGGACCCGCCAGCACAAGGGACGTGGCGC...CAAACTATAAGCAGCGTTGTACAAACAGGGAGTATTCCCACCTTCAGGGGCTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR CCA 90 bp CCATATTTAAATAAGCCTTCCTTAAACCCTAGCCCCAGTCCTGAGAGCTTTGAGGGGGTCGGGTGGGGCTaGCCTGAGGCCCTCAGGTGC +
Preference number: 4 (lower is better)
Translates to: PYLNKPSLNPSPSPESFEGVGWG*PEALRC
Trigger: GCACCTGAGGGCCTCAGGCCAGCCCCACCCGACCCC...CTCAAAGCTCTCAGGACTGGGGCTAGGGTTTAAGGAAGGCTTATTTAAATATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR CCA 90 bp ACCAGTCCCGTTCCGTATGCTGTGATCTATCCCTGCCGTGGAATTCCTCCGAGGTCCCGGGTCCTAAGATaGCCCATTGAAGCTGCACCT +
Preference number: 4 (lower is better)
Translates to: TSPVPYAVIYPCRGIPPRSRVLR*PIEAAP
Trigger: AGGTGCAGCTTCAATGGGCCATCTTAGGACCCGGGA...CCTCGGAGGAATTCCACGGCAGGGATAGATCACAGCATACGGAACGGGACTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR CCA 90 bp CTGTCTTCCACAAGGTGGGCCAGGGCTTCTCTTGTAACCATGTCACTTAGGGACCCGTCCTCGGCTCTCTaGCTCGATGTCACTAGCTGC +
Preference number: 4 (lower is better)
Translates to: LSSTRWARASLVTMSLRDPSSAL*LDVTSC
Trigger: GCAGCTAGTGACATCGAGCCAGAGAGCCGAGGACGG...GTCCCTAAGTGACATGGTTACAAGAGAAGCCCTGGCCCACCTTGTGGAAGACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR CCA 90 bp TGGGGGCGGGAAGCTACATCTGCAGTACCTCTGCTCCGTATCTTGTGGGCTGCGTCCTTCCCAGTACCATaGCTTTCACTTGCCCTCAGA +
Preference number: 4 (lower is better)
Translates to: WGREATSAVPLLRILWAASFPVP*LSLALR
Trigger: TCTGAGGGCAAGTGAAAGCCATGGTACTGGGAAGGA...CGCAGCCCACAAGATACGGAGCAGAGGTACTGCAGATGTAGCTTCCCGCCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR CCA 90 bp TGGGGGCGGGAAGCTACATCTGCAGTACCTCTGCTCCGTATCTTGTGGGCTGCGGGACATGGTACAGTGTaGGAGACAGCACTAACACGT +
Preference number: 4 (lower is better)
Translates to: WGREATSAVPLLRILWAAGHGTV*ETALTR
Trigger: ACGTGTTAGTGCTGTCTCCCACACTGTACCATGTCC...CGCAGCCCACAAGATACGGAGCAGAGGTACTGCAGATGTAGCTTCCCGCCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR TCA 90 bp GCTATGGTTGAGCAAAGGAACACACACCTACACACCTTGCTTCTTCCCACTAGCGGAATAGTGGCTCAGTaGCCCCCACCAGGGCCTCTC +
Preference number: 4 (lower is better)
Translates to: AMVEQRNTHLHTLLLPTSGIVAQ*PPPGPL
Trigger: GAGAGGCCCTGGTGGGGGTCACTGAGCCACTATTCC...GCTAGTGGGAAGAAGCAAGGTGTGTAGGTGTGTGTTCCTTTGCTCAACCATAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR TCA 90 bp CACTGTGATGGTGACATTCACTGGAGAATCCGTGGTTTCTTGTGCAGGATCCAATGGGCCTGCAGGAGGTaGACGGCCATCGAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: HCDGDIHWRIRGFLCRIQWACRR*TAIEEL
Trigger: CAGCTCCTCGATGGCCGTTCACCTCCTGCAGGCCCA...TTGGATCCTGCACAAGAAACCACGGATTCTCCAGTGAATGTCACCATCACAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640497.1
CDS-3UTR TCA 90 bp AGCTGCTCTCTGGCCTCCGCGGGCAGAGCTCTGCTTATGACTTCGTCTTCCAGACTTTCAGTTTTGCACTaGCAGTCTGGTGACAGGTGC +
Preference number: 4 (lower is better)
Translates to: SCSLASAGRALLMTSSSRLSVLH*QSGDRC
Trigger: GCACCTGTCACCAGACTGTCAGTGCAAAACTGAAAG...TCTGGAAGACGAAGTCATAAGCAGAGCTCTGCCCGCGGAGGCCAGAGAGCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR GCA 90 bp GTGGTTCACTCTTTGGATGGAACCAGTCCCGTTCCGTATGCTGTGATCTATCCCCATTCCCGTGCCTGCTaGACCCAACACCGCTGGGTA +
Preference number: 4 (lower is better)
Translates to: VVHSLDGTSPVPYAVIYPHSRAC*TQHRWV
Trigger: TACCCAGCGGTGTTGGGTGCAGCAGGCACGGGAATG...GGGATAGATCACAGCATACGGAACGGGACTGGTTCCATCCAAAGAGTGAACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR CCA 90 bp GTGGTTCACTCTTTGGATGGAACCAGTCCCGTTCCGTATGCTGTGATCTATCCCGTCGCACTTGAGGCTTaGACACCGGCACCAGCACAG +
Preference number: 4 (lower is better)
Translates to: VVHSLDGTSPVPYAVIYPVALEA*TPAPAQ
Trigger: CTGTGCTGGTGCCGGTGTCCAAGCCTCAAGTGCGAC...GGGATAGATCACAGCATACGGAACGGGACTGGTTCCATCCAAAGAGTGAACCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR CCA 90 bp TGTGATGGTGACATTCACTGGAGAATCCGTGGTTTCTTGTGCAGGATCCAAACCAGCTGGAGGTGGCAGTaGGGGTCAGGGGTCCTGAGC +
Preference number: 4 (lower is better)
Translates to: CDGDIHWRIRGFLCRIQTSWRWQ*GSGVLS
Trigger: GCTCAGGACCCCTGACCCCCACTGCCACCTCCAGCT...GGTTTGGATCCTGCACAAGAAACCACGGATTCTCCAGTGAATGTCACCATCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640497.1
CDS-3UTR CCA 90 bp CTGTCTTCCACAAGGTGGGCCAGGGCTTCTCTTGTAACCATGTCACTTAGGGACTGGCGGGTCCCCCGTTaGCTTTCTTGCCGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: LSSTRWARASLVTMSLRDWRVPR*LSCRFF
Trigger: GAAGAAACGGCAAGAAAGCCAACGGGGGACCCGCCA...GTCCCTAAGTGACATGGTTACAAGAGAAGCCCTGGCCCACCTTGTGGAAGACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR TCA 90 bp ATAGCCCCTGAAGGTGGGAATACTCCCTGTTTGTACAACGCTGCTTATAGTTTGACATGGCTCCATCGGTaGCGGCCACAGGCCGGGGAA +
Preference number: 4 (lower is better)
Translates to: IAPEGGNTPCLYNAAYSLTWLHR*RPQAGE
Trigger: TTCCCCGGCCTGTGGCCGTCACCGATGGAGCCATGT...CAAACTATAAGCAGCGTTGTACAAACAGGGAGTATTCCCACCTTCAGGGGCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR TCA 90 bp GCGGTCCCGCCTCACACATTGTCTATTTTTACCATTAACCGAGCGCCACATGTTCCAGCGGCTCCATGGTaGTCACAGGCTTGTCAGGAC +
Preference number: 4 (lower is better)
Translates to: AVPPHTLSIFTINRAPHVPAAPW*SQACQD
Trigger: GTCCTGACAAGCCTGTGATCACCATGGAGCCGCTGG...AACATGTGGCGCTCGGTTAATGGTAAAAATAGACAATGTGTGAGGCGGGACCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR TCA 90 bp CTGCTTTCCAAAAGCATTGTGGTTCACTCTTTGGATGGAACCAGTCCCGTTCCGCCTCAGGGTGCAGCATaGATCCTGAAGTGCCGGGGT +
Preference number: 4 (lower is better)
Translates to: LLSKSIVVHSLDGTSPVPPQGAA*ILKCRG
Trigger: ACCCCGGCACTTCAGGATTCATGCTGCACCCTGAGG...CGGAACGGGACTGGTTCCATCCAAAGAGTGAACCACAATGCTTTTGGAAAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR TCA 90 bp GCGGTCCCGCCTCACACATTGTCTATTTTTACCATTAACCGAGCGCCACATGTTTCCAGCAGCACACTCTaGCTGCTATTGCCCACGGCG +
Preference number: 4 (lower is better)
Translates to: AVPPHTLSIFTINRAPHVSSSTL*LLLPTA
Trigger: CGCCGTGGGCAATAGCAGTCAGAGTGTGCTGCTGGA...AACATGTGGCGCTCGGTTAATGGTAAAAATAGACAATGTGTGAGGCGGGACCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR TCA 90 bp GTGGTTCACTCTTTGGATGGAACCAGTCCCGTTCCGTATGCTGTGATCTATCCCCAGAGATCAAGGCCCTaGAGGAGCAGGATCTTGGGC +
Preference number: 4 (lower is better)
Translates to: VVHSLDGTSPVPYAVIYPQRSRP*RSRILG
Trigger: GCCCAAGATCCTGCTCCTTCAGGGCCTTGATCTCTG...GGGATAGATCACAGCATACGGAACGGGACTGGTTCCATCCAAAGAGTGAACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR TCA 90 bp CCTGAAACTCCCCTGTGCACACCCCTCTGTTCTGACTGCAGAGATCAAGGCCCTGCATCCATCTTGGGCTaGTCATGCCACAGATCTCAT +
Preference number: 4 (lower is better)
Translates to: PETPLCTPLCSDCRDQGPASILG*SCHRSH
Trigger: ATGAGATCTGTGGCATGATCAGCCCAAGATGGATGC...AGGGCCTTGATCTCTGCAGTCAGAACAGAGGGGTGTGCACAGGGGAGTTTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR GCA 90 bp CCATATTTAAATAAGCCTTCCTTAAACCCTAGCCCCAGTCCTGAGAGCTTTGAGGCTGGGCAGGTGGTGTaGCCCCGCGGAGAGAGCACT +
Preference number: 4 (lower is better)
Translates to: PYLNKPSLNPSPSPESFEAGQVV*PRGEST
Trigger: AGTGCTCTCTCCGCGGGGGCACACCACCTGCCCAGC...CTCAAAGCTCTCAGGACTGGGGCTAGGGTTTAAGGAAGGCTTATTTAAATATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR GCA 90 bp CACTGCAGCGTCAGTGATGTTCGTAAGCTATGGTTGAGCAAAGGAACACACACCCACTCTGACTGCTATTaGCCACGGCGTTGCGGGCCA +
Preference number: 4 (lower is better)
Translates to: HCSVSDVRKLWLSKGTHTHSDCY*PRRCGP
Trigger: TGGCCCGCAACGCCGTGGGCAATAGCAGTCAGAGTG...GGTGTGTGTTCCTTTGCTCAACCATAGCTTACGAACATCACTGACGCTGCAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR GCA 90 bp ACCAGTCCCGTTCCGTATGCTGTGATCTATCCCTGCCGTGGAATTCCTCCGAGGTCTGGTGACAGGTGCTaGCAGGGTGCAAGTTACATT +
Preference number: 4 (lower is better)
Translates to: TSPVPYAVIYPCRGIPPRSGDRC*QGASYI
Trigger: AATGTAACTTGCACCCTGGCAGCACCTGTCACCAGA...CCTCGGAGGAATTCCACGGCAGGGATAGATCACAGCATACGGAACGGGACTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR GCA 90 bp GATGGTGACATTCACTGGAGAATCCGTGGTTTCTTGTGCAGGATCCAAACCTGGTTTGCTCCCTTCCGCTaGACCAGGAAGCCCGTCAGG +
Preference number: 4 (lower is better)
Translates to: DGDIHWRIRGFLCRIQTWFAPFR*TRKPVR
Trigger: CCTGACGGGCTTCCTGGTGCAGCGGAAGGGAGCAAA...CCAGGTTTGGATCCTGCACAAGAAACCACGGATTCTCCAGTGAATGTCACCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640497.1
CDS-3UTR CCA 90 bp GCTATGGTTGAGCAAAGGAACACACACCTACACACCTTGCTTCTTCCCACTAGCGCCACGTGCAGAACCTaGCATAGGAAGTGGCCACGG +
Preference number: 4 (lower is better)
Translates to: AMVEQRNTHLHTLLLPTSATCRT*HRKWPR
Trigger: CCGTGGCCACTTCCTATGCCAGGTTCTGCACGTGGC...GCTAGTGGGAAGAAGCAAGGTGTGTAGGTGTGTGTTCCTTTGCTCAACCATAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR CCA 90 bp TATGAGTTCTCCCTAAGCGTGAGTTGGCTCTGCCCTGCACAGGCACCCAAACAGTGCAGGATCCAAACCTaGGGTGGTGGTTGGTGTTTC +
Preference number: 4 (lower is better)
Translates to: YEFSLSVSWLCPAQAPKQCRIQT*GGGWCF
Trigger: GAAACACCAACCACCACCCCAGGTTTGGATCCTGCA...CTGTTTGGGTGCCTGTGCAGGGCAGAGCCAACTCACGCTTAGGGAGAACTCATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR CCA 90 bp GTGGTTCACTCTTTGGATGGAACCAGTCCCGTTCCGTATGCTGTGATCTATCCCCTGCTCCGTATCTTGTaGGCTGCGACTCCTGGAGTC +
Preference number: 4 (lower is better)
Translates to: VVHSLDGTSPVPYAVIYPLLRIL*AATPGV
Trigger: GACTCCAGGAGTCGCAGCCCACAAGATACGGAGCAG...GGGATAGATCACAGCATACGGAACGGGACTGGTTCCATCCAAAGAGTGAACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR CCA 90 bp GTTCGTAAGCTATGGTTGAGCAAAGGAACACACACCTACACACCTTGCTTCTTCCCAGCTCCCCCAGCCTaGGGGCGGGAAGCTACATCT +
Preference number: 4 (lower is better)
Translates to: VRKLWLSKGTHTYTPCFFPAPPA*GREATS
Trigger: AGATGTAGCTTCCCGCCCCCAGGCTGGGGGAGCTGG...GAAGAAGCAAGGTGTGTAGGTGTGTGTTCCTTTGCTCAACCATAGCTTACGAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR CCA 90 bp CCTGAAACTCCCCTGTGCACACCCCTCTGTTCTGACTGCAGAGATCAAGGCCCTAACTTTGCGTTTCCTTaGAGGGAAGGGAGGTGGGTA +
Preference number: 4 (lower is better)
Translates to: PETPLCTPLCSDCRDQGPNFAFP*REGRWV
Trigger: TACCCACCTCCCTTCCCTCCAAGGAAACGCAAAGTT...AGGGCCTTGATCTCTGCAGTCAGAACAGAGGGGTGTGCACAGGGGAGTTTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR TCA 90 bp CACTGCAGCGTCAGTGATGTTCGTAAGCTATGGTTGAGCAAAGGAACACACACCCCTAAGATGGCCCATTaGAGCTGCACCTCTCTCCGG +
Preference number: 4 (lower is better)
Translates to: HCSVSDVRKLWLSKGTHTPKMAH*SCTSLR
Trigger: CCGGAGAGAGGTGCAGCTTCAATGGGCCATCTTAGG...GGTGTGTGTTCCTTTGCTCAACCATAGCTTACGAACATCACTGACGCTGCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR TCA 90 bp CTGCTTTCCAAAAGCATTGTGGTTCACTCTTTGGATGGAACCAGTCCCGTTCCGTGTCCTGCAGTGTGGTaGTTCAGAGCCAGGATGCGG +
Preference number: 4 (lower is better)
Translates to: LLSKSIVVHSLDGTSPVPCPAVW*FRARMR
Trigger: CCGCATCCTGGCTCTGAATCACCACACTGCAGGACA...CGGAACGGGACTGGTTCCATCCAAAGAGTGAACCACAATGCTTTTGGAAAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR TCA 90 bp AGCTGCTCTCTGGCCTCCGCGGGCAGAGCTCTGCTTATGACTTCGTCTTCCAGATTCGTAAGCTATGGTTaGGCAAAGGAACACACACCT +
Preference number: 4 (lower is better)
Translates to: SCSLASAGRALLMTSSSRFVSYG*AKEHTP
Trigger: AGGTGTGTGTTCCTTTGCTCAACCATAGCTTACGAA...TCTGGAAGACGAAGTCATAAGCAGAGCTCTGCCCGCGGAGGCCAGAGAGCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR TCA 90 bp CTGCTTTCCAAAAGCATTGTGGTTCACTCTTTGGATGGAACCAGTCCCGTTCCGCACACCCCTCTGTTCTaGCTGCAGAGATCAAGGCCC +
Preference number: 4 (lower is better)
Translates to: LLSKSIVVHSLDGTSPVPHTPLF*LQRSRP
Trigger: GGGCCTTGATCTCTGCAGTCAGAACAGAGGGGTGTG...CGGAACGGGACTGGTTCCATCCAAAGAGTGAACCACAATGCTTTTGGAAAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR CCA 90 bp CTGCTTTCCAAAAGCATTGTGGTTCACTCTTTGGATGGAACCAGTCCCGTTCCGACCTGGGGTGGTGGTTaGTGTTTCAAGGCGGGGGAA +
Preference number: 4 (lower is better)
Translates to: LLSKSIVVHSLDGTSPVPTWGGG*CFKAGE
Trigger: TTCCCCCGCCTTGAAACACCAACCACCACCCCAGGT...CGGAACGGGACTGGTTCCATCCAAAGAGTGAACCACAATGCTTTTGGAAAGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR CCA 90 bp ATAGCCCCTGAAGGTGGGAATACTCCCTGTTTGTACAACGCTGCTTATAGTTTGAGAGAAGCTGCTCTCTaGCCTCCGCGGGCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: IAPEGGNTPCLYNAAYSLREAAL*PPRAEL
Trigger: GAGCTCTGCCCGCGGAGGCCAGAGAGCAGCTTCTCT...CAAACTATAAGCAGCGTTGTACAAACAGGGAGTATTCCCACCTTCAGGGGCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR CCA 90 bp CACTGTGATGGTGACATTCACTGGAGAATCCGTGGTTTCTTGTGCAGGATCCAAGCTGGATATCCCAGCTaGAGGTGGCAGTGGGGGTCA +
Preference number: 4 (lower is better)
Translates to: HCDGDIHWRIRGFLCRIQAGYPS*RWQWGS
Trigger: TGACCCCCACTGCCACCTCCAGCTGGGATATCCAGC...TTGGATCCTGCACAAGAAACCACGGATTCTCCAGTGAATGTCACCATCACAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000640497.1
CDS-3UTR CCA 90 bp GTTGCAGTCACTGTGATGGTGACATTCACTGGAGAATCCGTGGTTTCTTGTGCAACCTGGGGTGGTGGTTaGTGTTTCAAGGCCTGCCGG +
Preference number: 4 (lower is better)
Translates to: VAVTVMVTFTGESVVSCATWGGG*CFKACR
Trigger: CCGGCAGGCCTTGAAACACCAACCACCACCCCAGGT...TGCACAAGAAACCACGGATTCTCCAGTGAATGTCACCATCACAGTGACTGCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640497.1
CDS-3UTR TCA 90 bp CACTGCAGCGTCAGTGATGTTCGTAAGCTATGGTTGAGCAAAGGAACACACACCGTGCAGCATGAATCCTaGAGTGCCGGGGTCCACTTT +
Preference number: 4 (lower is better)
Translates to: HCSVSDVRKLWLSKGTHTVQHES*SAGVHF
Trigger: AAAGTGGACCCCGGCACTTCAGGATTCATGCTGCAC...GGTGTGTGTTCCTTTGCTCAACCATAGCTTACGAACATCACTGACGCTGCAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR TCA 90 bp CACTGTGATGGTGACATTCACTGGAGAATCCGTGGTTTCTTGTGCAGGATCCAACCTAAGATGGCCCATTaGAGCTGCACCTCTCTCCGG +
Preference number: 4 (lower is better)
Translates to: HCDGDIHWRIRGFLCRIQPKMAH*SCTSLR
Trigger: CCGGAGAGAGGTGCAGCTTCAATGGGCCATCTTAGG...TTGGATCCTGCACAAGAAACCACGGATTCTCCAGTGAATGTCACCATCACAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640497.1
CDS-3UTR TCA 90 bp CCTGAAACTCCCCTGTGCACACCCCTCTGTTCTGACTGCAGAGATCAAGGCCCTCTCCACCTGGAAATTTaGTCTTTACTGTGCTCAGTG +
Preference number: 4 (lower is better)
Translates to: PETPLCTPLCSDCRDQGPLHLEI*SLLCSV
Trigger: CACTGAGCACAGTAAAGATCAAATTTCCAGGTGGAG...AGGGCCTTGATCTCTGCAGTCAGAACAGAGGGGTGTGCACAGGGGAGTTTCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR GCA 90 bp CTGCTTTCCAAAAGCATTGTGGTTCACTCTTTGGATGGAACCAGTCCCGTTCCGTCCTCGGGGCAACTTTaGGTTTCCTTGGAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: LLSKSIVVHSLDGTSPVPSSGQL*VSLEGR
Trigger: CCTTCCCTCCAAGGAAACGCAAAGTTGCCCCGAGGA...CGGAACGGGACTGGTTCCATCCAAAGAGTGAACCACAATGCTTTTGGAAAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR GCA 90 bp ACCAGTCCCGTTCCGTATGCTGTGATCTATCCCTGCCGTGGAATTCCTCCGAGGTGTTTTAGCATAAACTaGCCCGCTCCCACTGTATCA +
Preference number: 4 (lower is better)
Translates to: TSPVPYAVIYPCRGIPPRCFSIN*PAPTVS
Trigger: TGATACAGTGGGAGCGGGGCAGTTTATGCTAAAACA...CCTCGGAGGAATTCCACGGCAGGGATAGATCACAGCATACGGAACGGGACTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR GCA 90 bp GTTGCAGTCACTGTGATGGTGACATTCACTGGAGAATCCGTGGTTTCTTGTGCACTCTGTTGGTGCCTTTaGTCCCTTCCGCTGCACCAG +
Preference number: 4 (lower is better)
Translates to: VAVTVMVTFTGESVVSCALCWCL*SLPLHQ
Trigger: CTGGTGCAGCGGAAGGGAGCAAAGGCACCAACAGAG...TGCACAAGAAACCACGGATTCTCCAGTGAATGTCACCATCACAGTGACTGCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640497.1
CDS-3UTR GCA 90 bp TGGTGTTGCAGTCACTGTGATGGTGACATTCACTGGAGAATCCGTGGTTTCTTGGAACCCCTCTGTTGGTaGCTTTGCTCCCTTCCGCTG +
Preference number: 4 (lower is better)
Translates to: WCCSHCDGDIHWRIRGFLEPLCW*LCSLPL
Trigger: CAGCGGAAGGGAGCAAAGGCACCAACAGAGGGGTTC...CAAGAAACCACGGATTCTCCAGTGAATGTCACCATCACAGTGACTGCAACACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640497.1
CDS-3UTR CCA 90 bp ACCAGTCCCGTTCCGTATGCTGTGATCTATCCCTGCCGTGGAATTCCTCCGAGGGATGGTGACATTCACTaGAGAATCCGTGGTTTCTTG +
Preference number: 4 (lower is better)
Translates to: TSPVPYAVIYPCRGIPPRDGDIH*RIRGFL
Trigger: CAAGAAACCACGGATTCTCCAGTGAATGTCACCATC...CCTCGGAGGAATTCCACGGCAGGGATAGATCACAGCATACGGAACGGGACTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR CCA 90 bp CCTGAAACTCCCCTGTGCACACCCCTCTGTTCTGACTGCAGAGATCAAGGCCCTCTTATAGTTTGTGATTaGGGTGGGCGAATGTCTTCC +
Preference number: 4 (lower is better)
Translates to: PETPLCTPLCSDCRDQGPLIVCD*GGRMSS
Trigger: GGAAGACATTCGCCCACCCCAATCACAAACTATAAG...AGGGCCTTGATCTCTGCAGTCAGAACAGAGGGGTGTGCACAGGGGAGTTTCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR CCA 90 bp TGGTGTTGCAGTCACTGTGATGGTGACATTCACTGGAGAATCCGTGGTTTCTTGCTGGAACCCCTCTGTTaGTGCCTTTGCTCCCTTCCG +
Preference number: 4 (lower is better)
Translates to: WCCSHCDGDIHWRIRGFLLEPLC*CLCSLP
Trigger: CGGAAGGGAGCAAAGGCACCAACAGAGGGGTTCCAG...CAAGAAACCACGGATTCTCCAGTGAATGTCACCATCACAGTGACTGCAACACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640497.1
CDS-3UTR TCA 90 bp CTATTTTTACCATTAACCGAGCGCCACATGTTTATGAACTTCAGGATAGAAATTCAGCGGGGCAGGCCCTaGGCCACAGGCCAGCTCCAC +
Preference number: 4 (lower is better)
Translates to: LFLPLTERHMFMNFRIEIQRGRP*ATGQLH
Trigger: GTGGAGCTGGCCTGTGGCTCAGGGCCTGCCCCGCTG...AATTTCTATCCTGAAGTTCATAAACATGTGGCGCTCGGTTAATGGTAAAAATAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR GCA 90 bp CACTGCAGCGTCAGTGATGTTCGTAAGCTATGGTTGAGCAAAGGAACACACACCCTCAGAGGGATGTCCTaGAGTGTGGTGATTCAGAGC +
Preference number: 4 (lower is better)
Translates to: HCSVSDVRKLWLSKGTHTLRGMS*SVVIQS
Trigger: GCTCTGAATCACCACACTGCAGGACATCCCTCTGAG...GGTGTGTGTTCCTTTGCTCAACCATAGCTTACGAACATCACTGACGCTGCAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR GCA 90 bp TATGAGTTCTCCCTAAGCGTGAGTTGGCTCTGCCCTGCACAGGCACCCAAACAGAGGCACTGTGCTCGGTaGTTGTTACTGTTAACTCAT +
Preference number: 4 (lower is better)
Translates to: YEFSLSVSWLCPAQAPKQRHCAR*LLLLTH
Trigger: ATGAGTTAACAGTAACAAGCACCGAGCACAGTGCCT...CTGTTTGGGTGCCTGTGCAGGGCAGAGCCAACTCACGCTTAGGGAGAACTCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR GCA 90 bp TGTTGCAGTCACTGTGATGGTGACATTCACTGGAGAATCCGTGGTTTCTTGTGCTTCAAGGCCTGCCGGTaGCTCAGCATCTTCTCTGGA +
Preference number: 4 (lower is better)
Translates to: CCSHCDGDIHWRIRGFLCFKACR*LSIFSG
Trigger: TCCAGAGAAGATGCTGAGGCACCGGCAGGCCTTGAA...GCACAAGAAACCACGGATTCTCCAGTGAATGTCACCATCACAGTGACTGCAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640497.1
CDS-3UTR CCA 90 bp CTGCTTTCCAAAAGCATTGTGGTTCACTCTTTGGATGGAACCAGTCCCGTTCCGTTGACAGGGTCCAGCTaGAATAGTGGCTCAGTGACC +
Preference number: 4 (lower is better)
Translates to: LLSKSIVVHSLDGTSPVPLTGSS*NSGSVT
Trigger: GGTCACTGAGCCACTATTCCAGCTGGACCCTGTCAA...CGGAACGGGACTGGTTCCATCCAAAGAGTGAACCACAATGCTTTTGGAAAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR CCA 90 bp CTGCTTTCCAAAAGCATTGTGGTTCACTCTTTGGATGGAACCAGTCCCGTTCCGCACATAGTGACTAGGTaGGTTGGAGGCAGCCAGACA +
Preference number: 4 (lower is better)
Translates to: LLSKSIVVHSLDGTSPVPHIVTR*VGGSQT
Trigger: TGTCTGGCTGCCTCCAACCCACCTAGTCACTATGTG...CGGAACGGGACTGGTTCCATCCAAAGAGTGAACCACAATGCTTTTGGAAAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR CCA 90 bp TGTGATGGTGACATTCACTGGAGAATCCGTGGTTTCTTGTGCAGGATCCAAACCTCCCGGGTCCTAAGATaGCCCATTGAAGCTGCACCT +
Preference number: 4 (lower is better)
Translates to: CDGDIHWRIRGFLCRIQTSRVLR*PIEAAP
Trigger: AGGTGCAGCTTCAATGGGCCATCTTAGGACCCGGGA...GGTTTGGATCCTGCACAAGAAACCACGGATTCTCCAGTGAATGTCACCATCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640497.1
CDS-3UTR CCA 90 bp GATGGTGACATTCACTGGAGAATCCGTGGTTTCTTGTGCAGGATCCAAACCTGGTGCAGGATCCAAACCTaGGGTGGTGGTTGGTGTTTC +
Preference number: 4 (lower is better)
Translates to: DGDIHWRIRGFLCRIQTWCRIQT*GGGWCF
Trigger: GAAACACCAACCACCACCCCAGGTTTGGATCCTGCA...CCAGGTTTGGATCCTGCACAAGAAACCACGGATTCTCCAGTGAATGTCACCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640497.1
CDS-3UTR CCA 90 bp GTGGTTCACTCTTTGGATGGAACCAGTCCCGTTCCGTATGCTGTGATCTATCCCGGAAATGAGAGGACATaGTACAGTGTGGGAGACAGC +
Preference number: 4 (lower is better)
Translates to: VVHSLDGTSPVPYAVIYPGNERT*YSVGDS
Trigger: GCTGTCTCCCACACTGTACCATGTCCTCTCATTTCC...GGGATAGATCACAGCATACGGAACGGGACTGGTTCCATCCAAAGAGTGAACCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR CCA 90 bp ATAGCCCCTGAAGGTGGGAATACTCCCTGTTTGTACAACGCTGCTTATAGTTTGTCCCTAAGCGTGAGTTaGCTCTGCCCTGCACAGGCA +
Preference number: 4 (lower is better)
Translates to: IAPEGGNTPCLYNAAYSLSLSVS*LCPAQA
Trigger: TGCCTGTGCAGGGCAGAGCCAACTCACGCTTAGGGA...CAAACTATAAGCAGCGTTGTACAAACAGGGAGTATTCCCACCTTCAGGGGCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR CCA 90 bp GTTGCAGTCACTGTGATGGTGACATTCACTGGAGAATCCGTGGTTTCTTGTGCAGACATTGGGAGGAGCTaGATATCCCAGCTGGAGGTG +
Preference number: 4 (lower is better)
Translates to: VAVTVMVTFTGESVVSCADIGRS*ISQLEV
Trigger: CACCTCCAGCTGGGATATCCAGCTCCTCCCAATGTC...TGCACAAGAAACCACGGATTCTCCAGTGAATGTCACCATCACAGTGACTGCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640497.1
CDS-3UTR CCA 90 bp TGTTGCAGTCACTGTGATGGTGACATTCACTGGAGAATCCGTGGTTTCTTGTGCCCTCAGCATCTTCTCTaGAACCCCTCTGTTGGTGCC +
Preference number: 4 (lower is better)
Translates to: CCSHCDGDIHWRIRGFLCPQHLL*NPSVGA
Trigger: GGCACCAACAGAGGGGTTCCAGAGAAGATGCTGAGG...GCACAAGAAACCACGGATTCTCCAGTGAATGTCACCATCACAGTGACTGCAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640497.1
CDS-3UTR TCA 90 bp CACTGCAGCGTCAGTGATGTTCGTAAGCTATGGTTGAGCAAAGGAACACACACCAGTCATGCTGGCAGCTaGCATTGTGACTCTGGAACA +
Preference number: 4 (lower is better)
Translates to: HCSVSDVRKLWLSKGTHTSHAGS*HCDSGT
Trigger: TGTTCCAGAGTCACAATGTCAGCTGCCAGCATGACT...GGTGTGTGTTCCTTTGCTCAACCATAGCTTACGAACATCACTGACGCTGCAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR TCA 90 bp TACCATGGCTTTCACTTGCCCTCAGACACCCAGAGATCCCTGTCTCCCCATTGTCTTTACTGTGCTCAGTaGTCACGAAATTGGTCAAGC +
Preference number: 4 (lower is better)
Translates to: YHGFHLPSDTQRSLSPHCLYCAQ*SRNWSS
Trigger: GCTTGACCAATTTCGTGATCACTGAGCACAGTAAAG...ACAATGGGGAGACAGGGATCTCTGGGTGTCTGAGGGCAAGTGAAAGCCATGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR GCA 90 bp AAGCATTCATTTGTGTTTTCACCCAGATTACAGACACACACACAAACAGACACAGGGGAGCTGGGCGGCTaGGTGACTCCAGGTGACGTT +
Preference number: 4 (lower is better)
Translates to: KHSFVFSPRLQTHTQTDTGELGG*VTPGDV
Trigger: AACGTCACCTGGAGTCACGCAGCCGCCCAGCTCCCC...TGTGTCTGTTTGTGTGTGTGTCTGTAATCTGGGTGAAAACACAAATGAATGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR GCA 90 bp CTGCTTTCCAAAAGCATTGTGGTTCACTCTTTGGATGGAACCAGTCCCGTTCCGTGGGCCTTATGGTGTTaGAGTCACTGTGATGGTGAC +
Preference number: 4 (lower is better)
Translates to: LLSKSIVVHSLDGTSPVPWALWC*SHCDGD
Trigger: GTCACCATCACAGTGACTGCAACACCATAAGGCCCA...CGGAACGGGACTGGTTCCATCCAAAGAGTGAACCACAATGCTTTTGGAAAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR GCA 90 bp GCTATGGTTGAGCAAAGGAACACACACCTACACACCTTGCTTCTTCCCACTAGCTCCTCTTCCTTGTCCTaGCACCTCTGTCTTCCACAA +
Preference number: 4 (lower is better)
Translates to: AMVEQRNTHLHTLLLPTSSSSLS*HLCLPQ
Trigger: TTGTGGAAGACAGAGGTGGCAGGACAAGGAAGAGGA...GCTAGTGGGAAGAAGCAAGGTGTGTAGGTGTGTGTTCCTTTGCTCAACCATAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR CCA 90 bp ACTGTTAACTCATTTAACCCCCACAACTCATCTACAAAGTTGGCATTAAAATCCCCCGCACTGCACACGTaGCCACCACGGAGGCTCCCT +
Preference number: 4 (lower is better)
Translates to: TVNSFNPHNSSTKLALKSPALHT*PPRRLP
Trigger: AGGGAGCCTCCGTGGTGGCCACGTGTGCAGTGCGGG...GGATTTTAATGCCAACTTTGTAGATGAGTTGTGGGGGTTAAATGAGTTAACAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR CCA 90 bp CTATTTTTACCATTAACCGAGCGCCACATGTTTATGAACTTCAGGATAGAAATTCCCAGCCAGAGGAGCTaGGCAGGTGGTGTGCCCCCG +
Preference number: 4 (lower is better)
Translates to: LFLPLTERHMFMNFRIEIPSQRS*AGGVPP
Trigger: CGGGGGCACACCACCTGCCCAGCTCCTCTGGCTGGG...AATTTCTATCCTGAAGTTCATAAACATGTGGCGCTCGGTTAATGGTAAAAATAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR CCA 90 bp CCATATTTAAATAAGCCTTCCTTAAACCCTAGCCCCAGTCCTGAGAGCTTTGAGTGCCGGGCAGCATACTaGAACACCAGTAGAGAGGCC +
Preference number: 4 (lower is better)
Translates to: PYLNKPSLNPSPSPESFECRAAY*NTSREA
Trigger: GGCCTCTCTACTGGTGTTCCAGTATGCTGCCCGGCA...CTCAAAGCTCTCAGGACTGGGGCTAGGGTTTAAGGAAGGCTTATTTAAATATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR CCA 90 bp GTTCGTAAGCTATGGTTGAGCAAAGGAACACACACCTACACACCTTGCTTCTTCCCTGTCTCCCCATTGTaGGTCCTCTTCCTTGTCCTG +
Preference number: 4 (lower is better)
Translates to: VRKLWLSKGTHTYTPCFFPVSPL*VLFLVL
Trigger: CAGGACAAGGAAGAGGACCCACAATGGGGAGACAGG...GAAGAAGCAAGGTGTGTAGGTGTGTGTTCCTTTGCTCAACCATAGCTTACGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR CCA 90 bp AGCTGCTCTCTGGCCTCCGCGGGCAGAGCTCTGCTTATGACTTCGTCTTCCAGATTTCCAAAAGCATTGTaGTTCACTCTTTGGATGGAA +
Preference number: 4 (lower is better)
Translates to: SCSLASAGRALLMTSSSRFPKAL*FTLWME
Trigger: TTCCATCCAAAGAGTGAACCACAATGCTTTTGGAAA...TCTGGAAGACGAAGTCATAAGCAGAGCTCTGCCCGCGGAGGCCAGAGAGCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR CCA 90 bp GCTATGGTTGAGCAAAGGAACACACACCTACACACCTTGCTTCTTCCCACTAGCTCACTCAGTGAGCCATaGGACCTGAATCCGAACCTA +
Preference number: 4 (lower is better)
Translates to: AMVEQRNTHLHTLLLPTSSLSEP*DLNPNL
Trigger: TAGGTTCGGATTCAGGTCCCATGGCTCACTGAGTGA...GCTAGTGGGAAGAAGCAAGGTGTGTAGGTGTGTGTTCCTTTGCTCAACCATAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR CAA 72 bp GACCACTGCAGCGTCAGTGATGTTCGTAAGCTATGGTaGAGCAAAGGAACACACACCTACACACCTTGCTTC +
Preference number: 4 (lower is better)
Translates to: DHCSVSDVRKLW*SKGTHTYTPCF
Trigger: GAAGCAAGGTGTGTAGGTGTGTGTTCCTTTGCTCAACCATAGCTTACGAACATCACTGACGCTGCAGTGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR TCA 90 bp ACTGTTAACTCATTTAACCCCCACAACTCATCTACAAAGTTGGCATTAAAATCCGTAGGGCCAGGTCCCTaGGGCCCTTCCCACTGCAGT +
Preference number: 4 (lower is better)
Translates to: TVNSFNPHNSSTKLALKSVGPGP*GPSHCS
Trigger: ACTGCAGTGGGAAGGGCCTCAGGGACCTGGCCCTAC...GGATTTTAATGCCAACTTTGTAGATGAGTTGTGGGGGTTAAATGAGTTAACAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR TCA 90 bp TACCATGGCTTTCACTTGCCCTCAGACACCCAGAGATCCCTGTCTCCCCATTGTTGTCGAATGAGTCTATaGAGACTCAATGCATCCATC +
Preference number: 4 (lower is better)
Translates to: YHGFHLPSDTQRSLSPHCCRMSL*RLNASI
Trigger: GATGGATGCATTGAGTCTTCATAGACTCATTCGACA...ACAATGGGGAGACAGGGATCTCTGGGTGTCTGAGGGCAAGTGAAAGCCATGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR TCA 90 bp ATTTTTCCATACTGCTTTCCAAAAGCATTGTGGTTCACTCTTTGGATGGAACCAGCACTGACAGTCTGGTaGCAGGTGCTGCCAGGGTGC +
Preference number: 4 (lower is better)
Translates to: IFPYCFPKALWFTLWMEPALTVW*QVLPGC
Trigger: GCACCCTGGCAGCACCTGTCACCAGACTGTCAGTGC...TGGTTCCATCCAAAGAGTGAACCACAATGCTTTTGGAAAGCAGTATGGAAAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR TCA 90 bp ATAGCCCCTGAAGGTGGGAATACTCCCTGTTTGTACAACGCTGCTTATAGTTTGGCAGAGCTCTGCTTATaGCTTCGTCTTCCAGAGGTC +
Preference number: 4 (lower is better)
Translates to: IAPEGGNTPCLYNAAYSLAELCL*LRLPEV
Trigger: GACCTCTGGAAGACGAAGTCATAAGCAGAGCTCTGC...CAAACTATAAGCAGCGTTGTACAAACAGGGAGTATTCCCACCTTCAGGGGCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR GCA 90 bp ACTGTTAACTCATTTAACCCCCACAACTCATCTACAAAGTTGGCATTAAAATCCAGGTCACGGGCTCTGTaGCCTCCCGCACTGCACACG +
Preference number: 4 (lower is better)
Translates to: TVNSFNPHNSSTKLALKSRSRAL*PPALHT
Trigger: CGTGTGCAGTGCGGGAGGGCACAGAGCCCGTGACCT...GGATTTTAATGCCAACTTTGTAGATGAGTTGTGGGGGTTAAATGAGTTAACAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR GCA 90 bp ACTGTTAACTCATTTAACCCCCACAACTCATCTACAAAGTTGGCATTAAAATCCCTGCCGCCCAGGGGCTaGTGCTGTTCGTCAAGCCAG +
Preference number: 4 (lower is better)
Translates to: TVNSFNPHNSSTKLALKSLPPRG*CCSSSQ
Trigger: CTGGCTTGACGAACAGCAGCAGCCCCTGGGCGGCAG...GGATTTTAATGCCAACTTTGTAGATGAGTTGTGGGGGTTAAATGAGTTAACAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR GCA 90 bp GTGATGGTGACATTCACTGGAGAATCCGTGGTTTCTTGTGCAGGATCCAAACCTATCCGTGGTTTCTTGTaGAGGATCCAAACCTGGGGT +
Preference number: 4 (lower is better)
Translates to: VMVTFTGESVVSCAGSKPIRGFL*RIQTWG
Trigger: ACCCCAGGTTTGGATCCTGCACAAGAAACCACGGAT...AGGTTTGGATCCTGCACAAGAAACCACGGATTCTCCAGTGAATGTCACCATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640497.1
CDS-3UTR GCA 90 bp CACTGCAGCGTCAGTGATGTTCGTAAGCTATGGTTGAGCAAAGGAACACACACCCAGGTGCTGCCAGGGTaGAAGTTACATTGCAATGTT +
Preference number: 4 (lower is better)
Translates to: HCSVSDVRKLWLSKGTHTQVLPG*KLHCNV
Trigger: AACATTGCAATGTAACTTGCACCCTGGCAGCACCTG...GGTGTGTGTTCCTTTGCTCAACCATAGCTTACGAACATCACTGACGCTGCAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR CCA 90 bp CTATTTTTACCATTAACCGAGCGCCACATGTTTATGAACTTCAGGATAGAAATTAGGCGGTGCCAGGGCTaGGTGCTGGCCAGTGCAGGT +
Preference number: 4 (lower is better)
Translates to: LFLPLTERHMFMNFRIEIRRCQG*VLASAG
Trigger: ACCTGCACTGGCCAGCACCCAGCCCTGGCACCGCCT...AATTTCTATCCTGAAGTTCATAAACATGTGGCGCTCGGTTAATGGTAAAAATAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR CCA 90 bp ATAGCCCCTGAAGGTGGGAATACTCCCTGTTTGTACAACGCTGCTTATAGTTTGGACATTGGGAGGAGCTaGATATCTCAGGACCTCCAG +
Preference number: 4 (lower is better)
Translates to: IAPEGGNTPCLYNAAYSLDIGRS*ISQDLQ
Trigger: CTGGAGGTCCTGAGATATCCAGCTCCTCCCAATGTC...CAAACTATAAGCAGCGTTGTACAAACAGGGAGTATTCCCACCTTCAGGGGCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR CCA 90 bp ATTTTTCCATACTGCTTTCCAAAAGCATTGTGGTTCACTCTTTGGATGGAACCAGCGGGGGAAAGTCTCTaGGTGCCGGGCAGCATACTG +
Preference number: 4 (lower is better)
Translates to: IFPYCFPKALWFTLWMEPAGESL*VPGSIL
Trigger: CAGTATGCTGCCCGGCACCCAGAGACTTTCCCCCGC...TGGTTCCATCCAAAGAGTGAACCACAATGCTTTTGGAAAGCAGTATGGAAAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR CCA 90 bp ACATTCACTGGAGAATCCGTGGTTTCTTGTGCAGGATCCAAACCTGGGGTGGTGGATGGTGACATTCACTaGAGAATCCGTGGTTTCTTG +
Preference number: 4 (lower is better)
Translates to: TFTGESVVSCAGSKPGVVDGDIH*RIRGFL
Trigger: CAAGAAACCACGGATTCTCCAGTGAATGTCACCATC...CACCACCCCAGGTTTGGATCCTGCACAAGAAACCACGGATTCTCCAGTGAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640497.1
CDS-3UTR CCA 90 bp ACTGTTAACTCATTTAACCCCCACAACTCATCTACAAAGTTGGCATTAAAATCCCCACGTCCCTTGTGCTaGCGGGTCCCCCGTTGGCTT +
Preference number: 4 (lower is better)
Translates to: TVNSFNPHNSSTKLALKSPRPLC*RVPRWL
Trigger: AAGCCAACGGGGGACCCGCCAGCACAAGGGACGTGG...GGATTTTAATGCCAACTTTGTAGATGAGTTGTGGGGGTTAAATGAGTTAACAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR TCA 90 bp GCGGTCCCGCCTCACACATTGTCTATTTTTACCATTAACCGAGCGCCACATGTTAGCCCTCTATTGGCGTaGACATCAGCTCTGATTTAT +
Preference number: 4 (lower is better)
Translates to: AVPPHTLSIFTINRAPHVSPLLA*TSALIY
Trigger: ATAAATCAGAGCTGATGTTCACGCCAATAGAGGGCT...AACATGTGGCGCTCGGTTAATGGTAAAAATAGACAATGTGTGAGGCGGGACCGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR GCA 90 bp ATTTTTCCATACTGCTTTCCAAAAGCATTGTGGTTCACTCTTTGGATGGAACCATGGCCGCCAGCCACGTaGAGAACCTGGCATAGGAAG +
Preference number: 4 (lower is better)
Translates to: IFPYCFPKALWFTLWMEPWPPAT*RTWHRK
Trigger: CTTCCTATGCCAGGTTCTGCACGTGGCTGGCGGCCA...TGGTTCCATCCAAAGAGTGAACCACAATGCTTTTGGAAAGCAGTATGGAAAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR GCA 90 bp TTTACTGTGCTCAGTGATCACGAAATTGGTCAAGCCTATTCATGTTCCTTCTCACGGAGTTGCTGGCGCTaGACATGTACCACCCTAGGT +
Preference number: 4 (lower is better)
Translates to: FTVLSDHEIGQAYSCSFSRSCWR*TCTTLG
Trigger: ACCTAGGGTGGTACATGTGCAGCGCCAGCAACTCCG...TGAGAAGGAACATGAATAGGCTTGACCAATTTCGTGATCACTGAGCACAGTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR GCA 90 bp TTTACTGTGCTCAGTGATCACGAAATTGGTCAAGCCTATTCATGTTCCTTCTCAGGGAAAGTCTCTGGGTaGCGGGCAGCATACTGGAAC +
Preference number: 4 (lower is better)
Translates to: FTVLSDHEIGQAYSCSFSGKVSG*RAAYWN
Trigger: GTTCCAGTATGCTGCCCGGCACCCAGAGACTTTCCC...TGAGAAGGAACATGAATAGGCTTGACCAATTTCGTGATCACTGAGCACAGTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR GCA 90 bp GTTCGTAAGCTATGGTTGAGCAAAGGAACACACACCTACACACCTTGCTTCTTCATCCGTGGTTTCTTGTaGAGGATCCAAACCTGGGGT +
Preference number: 4 (lower is better)
Translates to: VRKLWLSKGTHTYTPCFFIRGFL*RIQTWG
Trigger: ACCCCAGGTTTGGATCCTGCACAAGAAACCACGGAT...GAAGAAGCAAGGTGTGTAGGTGTGTGTTCCTTTGCTCAACCATAGCTTACGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR GCA 90 bp ACTGTGATGGTGACATTCACTGGAGAATCCGTGGTTTCTTGTGCAGGATCCAAATGGGCCTTATGGTGTTaGAGTCACTGTGATGGTGAC +
Preference number: 4 (lower is better)
Translates to: TVMVTFTGESVVSCAGSKWALWC*SHCDGD
Trigger: GTCACCATCACAGTGACTGCAACACCATAAGGCCCA...TTTGGATCCTGCACAAGAAACCACGGATTCTCCAGTGAATGTCACCATCACAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640497.1
CDS-3UTR GCA 90 bp GCGGTCCCGCCTCACACATTGTCTATTTTTACCATTAACCGAGCGCCACATGTTTGGAAGCAGCTAGCTTaGTCATACTTCTATAGCACC +
Preference number: 4 (lower is better)
Translates to: AVPPHTLSIFTINRAPHVWKQLA*SYFYST
Trigger: GGTGCTATAGAAGTATGAGCAAGCTAGCTGCTTCCA...AACATGTGGCGCTCGGTTAATGGTAAAAATAGACAATGTGTGAGGCGGGACCGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR GCA 90 bp CCATATTTAAATAAGCCTTCCTTAAACCCTAGCCCCAGTCCTGAGAGCTTTGAGGCGGGAAGCTACATCTaGAGTACCTCTGCTCCGTAT +
Preference number: 4 (lower is better)
Translates to: PYLNKPSLNPSPSPESFEAGSYI*STSAPY
Trigger: ATACGGAGCAGAGGTACTGCAGATGTAGCTTCCCGC...CTCAAAGCTCTCAGGACTGGGGCTAGGGTTTAAGGAAGGCTTATTTAAATATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR GCA 90 bp ATTTTTCCATACTGCTTTCCAAAAGCATTGTGGTTCACTCTTTGGATGGAACCACTCATCTGTGTCTCCTaGAGAGGCGGCTCGGAGTCC +
Preference number: 4 (lower is better)
Translates to: IFPYCFPKALWFTLWMEPLICVS*RGGSES
Trigger: GGACTCCGAGCCGCCTCTGCAGGAGACACAGATGAG...TGGTTCCATCCAAAGAGTGAACCACAATGCTTTTGGAAAGCAGTATGGAAAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR GCA 90 bp ATAGCCCCTGAAGGTGGGAATACTCCCTGTTTGTACAACGCTGCTTATAGTTTGGCCAGCAAAGTCTTTTaGATCGGGTGTGGCCCTTTT +
Preference number: 4 (lower is better)
Translates to: IAPEGGNTPCLYNAAYSLASKVF*IGCGPF
Trigger: AAAAGGGCCACACCCGATGCAAAAGACTTTGCTGGC...CAAACTATAAGCAGCGTTGTACAAACAGGGAGTATTCCCACCTTCAGGGGCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR CCA 90 bp ACTGTTAACTCATTTAACCCCCACAACTCATCTACAAAGTTGGCATTAAAATCCGTGTACAGGCCTGTGTaGACACGGCCAGCTCTGGCG +
Preference number: 4 (lower is better)
Translates to: TVNSFNPHNSSTKLALKSVYRPV*TRPALA
Trigger: CGCCAGAGCTGGCCGTGTCCACACAGGCCTGTACAC...GGATTTTAATGCCAACTTTGTAGATGAGTTGTGGGGGTTAAATGAGTTAACAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR CCA 90 bp TGGTGTTGCAGTCACTGTGATGGTGACATTCACTGGAGAATCCGTGGTTTCTTGTCACTGGAGAATCCGTaGTTTCTTGTGCAGGATCCA +
Preference number: 4 (lower is better)
Translates to: WCCSHCDGDIHWRIRGFLSLENP*FLVQDP
Trigger: TGGATCCTGCACAAGAAACCACGGATTCTCCAGTGA...CAAGAAACCACGGATTCTCCAGTGAATGTCACCATCACAGTGACTGCAACACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640497.1
CDS-3UTR CCA 90 bp TGTGATGGTGACATTCACTGGAGAATCCGTGGTTTCTTGTGCAGGATCCAAACCCCTCTTTGGGCCTTATaGTGTTGCAGTCACTGTGAT +
Preference number: 4 (lower is better)
Translates to: CDGDIHWRIRGFLCRIQTPLWAL*CCSHCD
Trigger: ATCACAGTGACTGCAACACCATAAGGCCCAAAGAGG...GGTTTGGATCCTGCACAAGAAACCACGGATTCTCCAGTGAATGTCACCATCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640497.1
CDS-3UTR CCA 90 bp GATGGTGACATTCACTGGAGAATCCGTGGTTTCTTGTGCAGGATCCAAACCTGGTTGCATCTTCCTCTTTaGGCCTTATGGTGTTGCAGT +
Preference number: 4 (lower is better)
Translates to: DGDIHWRIRGFLCRIQTWLHLPL*ALWCCS
Trigger: ACTGCAACACCATAAGGCCCAAAGAGGAAGATGCAA...CCAGGTTTGGATCCTGCACAAGAAACCACGGATTCTCCAGTGAATGTCACCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640497.1
CDS-3UTR CCA 90 bp CTATTTTTACCATTAACCGAGCGCCACATGTTTATGAACTTCAGGATAGAAATTGTGGGCTGCGACTCCTaGAGTCGGACCACTGCAGCG +
Preference number: 4 (lower is better)
Translates to: LFLPLTERHMFMNFRIEIVGCDS*SRTTAA
Trigger: CGCTGCAGTGGTCCGACTCCAGGAGTCGCAGCCCAC...AATTTCTATCCTGAAGTTCATAAACATGTGGCGCTCGGTTAATGGTAAAAATAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR TCA 90 bp TTTACTGTGCTCAGTGATCACGAAATTGGTCAAGCCTATTCATGTTCCTTCTCATCCACTTTTTGTTGTTaGGGCCCCAGCCAGAGGAGC +
Preference number: 4 (lower is better)
Translates to: FTVLSDHEIGQAYSCSFSSTFCC*GPSQRS
Trigger: GCTCCTCTGGCTGGGGCCTCAACAACAAAAAGTGGA...TGAGAAGGAACATGAATAGGCTTGACCAATTTCGTGATCACTGAGCACAGTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR GCA 90 bp CCATATTTAAATAAGCCTTCCTTAAACCCTAGCCCCAGTCCTGAGAGCTTTGAGACCATGGCTTTCACTTaGCCTCAGACACCCAGAGAT +
Preference number: 4 (lower is better)
Translates to: PYLNKPSLNPSPSPESFETMAFT*PQTPRD
Trigger: ATCTCTGGGTGTCTGAGGGCAAGTGAAAGCCATGGT...CTCAAAGCTCTCAGGACTGGGGCTAGGGTTTAAGGAAGGCTTATTTAAATATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR CAA 72 bp TCCATACTGCTTTCCAAAAGCATTGTGGTTCACTCTTaGGATGGAACCAGTCCCGTTCCGTATGCTGTGATC +
Preference number: 4 (lower is better)
Translates to: SILLSKSIVVHS*DGTSPVPYAVI
Trigger: GATCACAGCATACGGAACGGGACTGGTTCCATCCAAAGAGTGAACCACAATGCTTTTGGAAAGCAGTATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR TCA 90 bp ACTGTTAACTCATTTAACCCCCACAACTCATCTACAAAGTTGGCATTAAAATCCTTACTCAGTCGCACTTaGGGCTTGGACACCGGCACC +
Preference number: 4 (lower is better)
Translates to: TVNSFNPHNSSTKLALKSLLSRT*GLDTGT
Trigger: GGTGCCGGTGTCCAAGCCTCAAGTGCGACTGAGTAA...GGATTTTAATGCCAACTTTGTAGATGAGTTGTGGGGGTTAAATGAGTTAACAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR TCA 90 bp GCGGTCCCGCCTCACACATTGTCTATTTTTACCATTAACCGAGCGCCACATGTTGGTGTTTTTGTCGAATaGGTCTATGAAGACTCAATG +
Preference number: 4 (lower is better)
Translates to: AVPPHTLSIFTINRAPHVGVFVE*VYEDSM
Trigger: CATTGAGTCTTCATAGACTCATTCGACAAAAACACC...AACATGTGGCGCTCGGTTAATGGTAAAAATAGACAATGTGTGAGGCGGGACCGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR CCA 90 bp GCTATGGTTGAGCAAAGGAACACACACCTACACACCTTGCTTCTTCCCACTAGCACCAGTTGTGAAGACTaGGTATTAAGTGAAAGTGGT +
Preference number: 4 (lower is better)
Translates to: AMVEQRNTHLHTLLLPTSTSCED*VLSESG
Trigger: ACCACTTTCACTTAATACCCAGTCTTCACAACTGGT...GCTAGTGGGAAGAAGCAAGGTGTGTAGGTGTGTGTTCCTTTGCTCAACCATAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR TCA 90 bp ACTGTTAACTCATTTAACCCCCACAACTCATCTACAAAGTTGGCATTAAAATCCTGTCAGGACCATAAATaGCGTCCAGGAAGGCCCCGT +
Preference number: 4 (lower is better)
Translates to: TVNSFNPHNSSTKLALKSCQDHK*RPGRPR
Trigger: ACGGGGCCTTCCTGGACGTCATTTATGGTCCTGACA...GGATTTTAATGCCAACTTTGTAGATGAGTTGTGGGGGTTAAATGAGTTAACAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR GCA 90 bp ACTGTTAACTCATTTAACCCCCACAACTCATCTACAAAGTTGGCATTAAAATCCGCTGTGATCTATCCCTaGCGTGGAATTCCTCCGAGG +
Preference number: 4 (lower is better)
Translates to: TVNSFNPHNSSTKLALKSAVIYP*RGIPPR
Trigger: CCTCGGAGGAATTCCACGGCAGGGATAGATCACAGC...GGATTTTAATGCCAACTTTGTAGATGAGTTGTGGGGGTTAAATGAGTTAACAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR CCA 90 bp AAGCATTCATTTGTGTTTTCACCCAGATTACAGACACACACACAAACAGACACACTCAGCATGATGAACTaGTCCCCCATTGTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: KHSFVFSPRLQTHTQTDTLSMMN*SPIVAV
Trigger: CACAGCCACAATGGGGGACCAGTTCATCATGCTGAG...TGTGTCTGTTTGTGTGTGTGTCTGTAATCTGGGTGAAAACACAAATGAATGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638636.2
3UTR CAA 72 bp AGTCTGGTGACAGGTGCTGCCAGGGTGCAAGTTACATaGCAATGTTCTAAACCTTTTGAAGTGTTCTTAGCA +
Preference number: 4 (lower is better)
Translates to: SLVTGAARVQVT*QCSKPFEVFLA
Trigger: TGCTAAGAACACTTCAAAAGGTTTAGAACATTGCAATGTAACTTGCACCCTGGCAGCACCTGTCACCAGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR GCA 90 bp ACTGTTAACTCATTTAACCCCCACAACTCATCTACAAAGTTGGCATTAAAATCCCATCTGCAGTACCTCTaGTCCGTATCTTGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: TVNSFNPHNSSTKLALKSHLQYL*SVSCGL
Trigger: CAGCCCACAAGATACGGAGCAGAGGTACTGCAGATG...GGATTTTAATGCCAACTTTGTAGATGAGTTGTGGGGGTTAAATGAGTTAACAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR GCA 90 bp CTATTTTTACCATTAACCGAGCGCCACATGTTTATGAACTTCAGGATAGAAATTCAGTCTGGTGACAGGTaGTGCCAGGGTGCAAGTTAC +
Preference number: 4 (lower is better)
Translates to: LFLPLTERHMFMNFRIEIQSGDR*CQGASY
Trigger: GTAACTTGCACCCTGGCAGCACCTGTCACCAGACTG...AATTTCTATCCTGAAGTTCATAAACATGTGGCGCTCGGTTAATGGTAAAAATAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR CCA 90 bp TTTACTGTGCTCAGTGATCACGAAATTGGTCAAGCCTATTCATGTTCCTTCTCATTGCATCTTCCTCTTTaGGCCTTATGGTGTTGCAGT +
Preference number: 4 (lower is better)
Translates to: FTVLSDHEIGQAYSCSFSLHLPL*ALWCCS
Trigger: ACTGCAACACCATAAGGCCCAAAGAGGAAGATGCAA...TGAGAAGGAACATGAATAGGCTTGACCAATTTCGTGATCACTGAGCACAGTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR CCA 90 bp CTATTTTTACCATTAACCGAGCGCCACATGTTTATGAACTTCAGGATAGAAATTCTGTCTTCCACAAGGTaGGCCAGGGCTTCTCTTGTA +
Preference number: 4 (lower is better)
Translates to: LFLPLTERHMFMNFRIEILSSTR*ARASLV
Trigger: TACAAGAGAAGCCCTGGCCCACCTTGTGGAAGACAG...AATTTCTATCCTGAAGTTCATAAACATGTGGCGCTCGGTTAATGGTAAAAATAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR CCA 90 bp ATTTTTCCATACTGCTTTCCAAAAGCATTGTGGTTCACTCTTTGGATGGAACCATCTGGAGCCATAATCTaGGCTCCTCCCATTTTTCCA +
Preference number: 4 (lower is better)
Translates to: IFPYCFPKALWFTLWMEPSGAII*APPIFP
Trigger: TGGAAAAATGGGAGGAGCCCAGATTATGGCTCCAGA...TGGTTCCATCCAAAGAGTGAACCACAATGCTTTTGGAAAGCAGTATGGAAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR TCA 90 bp ATTTTTCCATACTGCTTTCCAAAAGCATTGTGGTTCACTCTTTGGATGGAACCAGCTACGTTGGTTTTATaGCCAAAGTCTGACAGAAGG +
Preference number: 4 (lower is better)
Translates to: IFPYCFPKALWFTLWMEPATLVL*PKSDRR
Trigger: CCTTCTGTCAGACTTTGGTCATAAAACCAACGTAGC...TGGTTCCATCCAAAGAGTGAACCACAATGCTTTTGGAAAGCAGTATGGAAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR CCA 90 bp ACTGTTAACTCATTTAACCCCCACAACTCATCTACAAAGTTGGCATTAAAATCCTTGTGGTTCACTCTTTaGATGGAACCAGTCCCGTTC +
Preference number: 4 (lower is better)
Translates to: TVNSFNPHNSSTKLALKSLWFTL*MEPVPF
Trigger: GAACGGGACTGGTTCCATCCAAAGAGTGAACCACAA...GGATTTTAATGCCAACTTTGTAGATGAGTTGTGGGGGTTAAATGAGTTAACAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR CCA 90 bp ACTGTTAACTCATTTAACCCCCACAACTCATCTACAAAGTTGGCATTAAAATCCGATGTTCGTAAGCTATaGTTGAGCAAAGGAACACAC +
Preference number: 4 (lower is better)
Translates to: TVNSFNPHNSSTKLALKSDVRKL*LSKGTH
Trigger: GTGTGTTCCTTTGCTCAACCATAGCTTACGAACATC...GGATTTTAATGCCAACTTTGTAGATGAGTTGTGGGGGTTAAATGAGTTAACAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR GCA 90 bp ATTTTTCCATACTGCTTTCCAAAAGCATTGTGGTTCACTCTTTGGATGGAACCAGGGTGCAAGTTACATTaGAATGTTCTAAACCTTTTG +
Preference number: 4 (lower is better)
Translates to: IFPYCFPKALWFTLWMEPGCKLH*NVLNLL
Trigger: CAAAAGGTTTAGAACATTGCAATGTAACTTGCACCC...TGGTTCCATCCAAAGAGTGAACCACAATGCTTTTGGAAAGCAGTATGGAAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR CCA 90 bp CTATTTTTACCATTAACCGAGCGCCACATGTTTATGAACTTCAGGATAGAAATTTCTACCACCTCCACCTaGAAATTTGATCTTTACTGT +
Preference number: 4 (lower is better)
Translates to: LFLPLTERHMFMNFRIEISTTST*KFDLYC
Trigger: ACAGTAAAGATCAAATTTCCAGGTGGAGGTGGTAGA...AATTTCTATCCTGAAGTTCATAAACATGTGGCGCTCGGTTAATGGTAAAAATAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS GCA 90 bp GGCCTCGGGGTGCCCGATGCTGCCAGGCAAAGGTCACGGGCTCTGTaGCCTCCCGCACTGCACACGTGGCCACCACGGAGGCTCCCTCCA +
Preference number: 5 (lower is better)
Translates to: GLGVPDAARQRSRAL*PPALHTWPPRRLPP
Trigger: TGGAGGGAGCCTCCGTGGTGGCCACGTGTGCAGTGCGGGAGGGCACAGAGCCCGTGACCTTTGCCTGGCAGCATCGGGCACCCCGAGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS GCA 90 bp CCGATGCTGCCAGGCAAAGGTCACGGGCTCTGTGCCCTCCCGCACTaGACACGTGGCCACCACGGAGGCTCCCTCCACAGGGGACGGGTT +
Preference number: 5 (lower is better)
Translates to: PMLPGKGHGLCALPH*TRGHHGGSLHRGRV
Trigger: AACCCGTCCCCTGTGGAGGGAGCCTCCGTGGTGGCCACGTGTGCAGTGCGGGAGGGCACAGAGCCCGTGACCTTTGCCTGGCAGCATCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS GCA 90 bp TCAGTGACCCCCACCAGGGCCTCTCCAAGGCCTCGGGGTGCCCGATaGTGCCAGGCAAAGGTCACGGGCTCTGTGCCCTCCCGCACTGCA +
Preference number: 5 (lower is better)
Translates to: SVTPTRASPRPRGAR*CQAKVTGSVPSRTA
Trigger: TGCAGTGCGGGAGGGCACAGAGCCCGTGACCTTTGCCTGGCAGCATCGGGCACCCCGAGGCCTTGGAGAGGCCCTGGTGGGGGTCACTGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS CCA 90 bp GCCAGGCAAAGGTCACGGGCTCTGTGCCCTCCCGCACTGCACACGTaGCCACCACGGAGGCTCCCTCCACAGGGGACGGGTTACTCAGTC +
Preference number: 5 (lower is better)
Translates to: ARQRSRALCPPALHT*PPRRLPPQGTGYSV
Trigger: GACTGAGTAACCCGTCCCCTGTGGAGGGAGCCTCCGTGGTGGCCACGTGTGCAGTGCGGGAGGGCACAGAGCCCGTGACCTTTGCCTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS GCA 90 bp GATCTTCTTGGGCCTGCAGGAGGTGAACGGCCATCGAGGAGCTGCTaGCGCCCAGGGGCTGCTGCTGTTCGTCAAGCCAGCCCAGCGTGG +
Preference number: 5 (lower is better)
Translates to: DLLGPAGGERPSRSC*RPGAAAVRQASPAW
Trigger: CCACGCTGGGCTGGCTTGACGAACAGCAGCAGCCCCTGGGCGGCAGCAGCTCCTCGATGGCCGTTCACCTCCTGCAGGCCCAAGAAGATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000638511.1
ENST00000638636.2
ENST00000640497.1
CDS GCA 90 bp CCAGATCTTCTTGGGCCTGCAGGAGGTGAACGGCCATCGAGGAGCTaGTGCCGCCCAGGGGCTGCTGCTGTTCGTCAAGCCAGCCCAGCG +
Preference number: 5 (lower is better)
Translates to: PDLLGPAGGERPSRS*CRPGAAAVRQASPA
Trigger: CGCTGGGCTGGCTTGACGAACAGCAGCAGCCCCTGGGCGGCAGCAGCTCCTCGATGGCCGTTCACCTCCTGCAGGCCCAAGAAGATCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000638511.1
ENST00000638636.2
ENST00000640497.1
CDS CCA 90 bp GCAGGGGGCTCGCCGCCAGGCCACTCGCAGCTCAGCATGATGAACTaGTCCCCCATTGTGGCTGTGCTCCAGCAGGTAGGCCTCCCGAGA +
Preference number: 5 (lower is better)
Translates to: AGGSPPGHSQLSMMN*SPIVAVLQQVGLPR
Trigger: TCTCGGGAGGCCTACCTGCTGGAGCACAGCCACAATGGGGGACCAGTTCATCATGCTGAGCTGCGAGTGGCCTGGCGGCGAGCCCCCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000638511.1
ENST00000638636.2
CDS GCA 90 bp TCAGGACCTCCAGCAGCACACTCTGACTGCTATTGCCCACGGCGTTaGGGGCCACGCATTGGTAGGTGCCCCTGTGGTGTGCCGGGTCAG +
Preference number: 5 (lower is better)
Translates to: SGPPAAHSDCYCPRR*GPRIGRCPCGVPGQ
Trigger: CTGACCCGGCACACCACAGGGGCACCTACCAATGCGTGGCCCGCAACGCCGTGGGCAATAGCAGTCAGAGTGTGCTGCTGGAGGTCCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR CAA 90 bp CCTCCGAGGCTCCAACTCCGCAGCCAGAGAAGCTGCTCTCTGGCCTCCGCGGGCTGTGGGTCCTCTTCCTaGTCCTGCCACCTCTGTCTT +
Preference number: 5 (lower is better)
Translates to: PPRLQLRSQRSCSLASAGCGSSS*SCHLCL
Trigger: AAGACAGAGGTGGCAGGACAAGGAAGAGGACCCACA...GCCCGCGGAGGCCAGAGAGCAGCTTCTCTGGCTGCGGAGTTGGAGCCTCGGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR CAA 90 bp ACCAGTCCCGTTCCGTATGCTGTGATCTATCCCTGCCGTGGAATTCCTCCGAGGCAGGCGCCACGTCCCTaGTGCTGGCGGGTCCCCCGT +
Preference number: 5 (lower is better)
Translates to: TSPVPYAVIYPCRGIPPRQAPRP*CWRVPR
Trigger: ACGGGGGACCCGCCAGCACAAGGGACGTGGCGCCTG...CCTCGGAGGAATTCCACGGCAGGGATAGATCACAGCATACGGAACGGGACTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS CCA 90 bp CCTTCCGCTGCACCAGGAAGCCCGTCAGGTTCCCGGGTCCTAAGATaGCCCATTGAAGCTGCACCTCTCTCCGGTGCCTCCCGTAGGTCA +
Preference number: 5 (lower is better)
Translates to: PSAAPGSPSGSRVLR*PIEAAPLSGASRRS
Trigger: TGACCTACGGGAGGCACCGGAGAGAGGTGCAGCTTCAATGGGCCATCTTAGGACCCGGGAACCTGACGGGCTTCCTGGTGCAGCGGAAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638636.2
ENST00000640497.1
CDS-3UTR CAA 90 bp GGCAGGCCCACCTCCTCGGGGCAACTTTGCGTTTCCTTGGAGGGAAGGGAGGTGCTCCTCGGGGCAACTTaGCGTTTCCTTGGAGGGAAG +
Preference number: 5 (lower is better)
Translates to: GRPTSSGQLCVSLEGREVLLGAT*RFLGGK
Trigger: CTTCCCTCCAAGGAAACGCAAAGTTGCCCCGAGGAG...CACCTCCCTTCCCTCCAAGGAAACGCAAAGTTGCCCCGAGGAGGTGGGCCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS GCA 90 bp GAGCTGGATATCTCAGGACCTCCAGCAGCACACTCTGACTGCTATTaGCCACGGCGTTGCGGGCCACGCATTGGTAGGTGCCCCTGTGGT +
Preference number: 5 (lower is better)
Translates to: ELDISGPPAAHSDCY*PRRCGPRIGRCPCG
Trigger: ACCACAGGGGCACCTACCAATGCGTGGCCCGCAACGCCGTGGGCAATAGCAGTCAGAGTGTGCTGCTGGAGGTCCTGAGATATCCAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS CCA 90 bp CTGCACATGTACCACCCTAGGTGTGTCCGGTTGACAGGGTCCAGCTaGAATAGTGGCTCAGTGACCCCCACCAGGGCCTCTCCAAGGCCT +
Preference number: 5 (lower is better)
Translates to: LHMYHPRCVRLTGSS*NSGSVTPTRASPRP
Trigger: AGGCCTTGGAGAGGCCCTGGTGGGGGTCACTGAGCCACTATTCCAGCTGGACCCTGTCAACCGGACACACCTAGGGTGGTACATGTGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR CAA 90 bp AGCTGCTCTCTGGCCTCCGCGGGCAGAGCTCTGCTTATGACTTCGTCTTCCAGACTCCCTAAGCGTGAGTaGGCTCTGCCCTGCACAGGC +
Preference number: 5 (lower is better)
Translates to: SCSLASAGRALLMTSSSRLPKRE*ALPCTG
Trigger: GCCTGTGCAGGGCAGAGCCAACTCACGCTTAGGGAG...TCTGGAAGACGAAGTCATAAGCAGAGCTCTGCCCGCGGAGGCCAGAGAGCAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS CCA 90 bp GGTGTTTCAAGGCGGGGGAAAGTCTCTGGGTGCCGGGCAGCATACTaGAACACCAGTAGAGAGGCCACCGTTGCTACCACCATTCCCGTG +
Preference number: 5 (lower is better)
Translates to: GVSRRGKVSGCRAAY*NTSREATVATTIPV
Trigger: CACGGGAATGGTGGTAGCAACGGTGGCCTCTCTACTGGTGTTCCAGTATGCTGCCCGGCACCCAGAGACTTTCCCCCGCCTTGAAACACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS CCA 90 bp TGGTGGTTGGTGTTTCAAGGCCTGCCGGTGCCTCAGCATCTTCTCTaGAACCCCTCTGTTGGTGCCTTTGCTCCCTTCCGCTGCACCAGG +
Preference number: 5 (lower is better)
Translates to: WWLVFQGLPVPQHLL*NPSVGAFAPFRCTR
Trigger: CCTGGTGCAGCGGAAGGGAGCAAAGGCACCAACAGAGGGGTTCCAGAGAAGATGCTGAGGCACCGGCAGGCCTTGAAACACCAACCACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640497.1
CDS-3UTR CAA 90 bp TGGGGGCGGGAAGCTACATCTGCAGTACCTCTGCTCCGTATCTTGTGGGCTGCGGTCCACTTTTTGTTGTaGAGGCCCCAGCCAGAGGAG +
Preference number: 5 (lower is better)
Translates to: WGREATSAVPLLRILWAAVHFLL*RPQPEE
Trigger: CTCCTCTGGCTGGGGCCTCAACAACAAAAAGTGGAC...CGCAGCCCACAAGATACGGAGCAGAGGTACTGCAGATGTAGCTTCCCGCCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR CAA 90 bp TACCATGGCTTTCACTTGCCCTCAGACACCCAGAGATCCCTGTCTCCCCATTGTGTTGCGGGCCACGCATaGGTAGGTGCCCCTGTGGTG +
Preference number: 5 (lower is better)
Translates to: YHGFHLPSDTQRSLSPHCVAGHA*VGAPVV
Trigger: CACCACAGGGGCACCTACCAATGCGTGGCCCGCAAC...ACAATGGGGAGACAGGGATCTCTGGGTGTCTGAGGGCAAGTGAAAGCCATGGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR CAA 90 bp CCTGAAACTCCCCTGTGCACACCCCTCTGTTCTGACTGCAGAGATCAAGGCCCTCTGGCGGGTCCCCCGTaGGCTTTCTTGCCGTTTCTT +
Preference number: 5 (lower is better)
Translates to: PETPLCTPLCSDCRDQGPLAGPP*AFLPFL
Trigger: AAGAAACGGCAAGAAAGCCAACGGGGGACCCGCCAG...AGGGCCTTGATCTCTGCAGTCAGAACAGAGGGGTGTGCACAGGGGAGTTTCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR CAA 90 bp CCTGAAACTCCCCTGTGCACACCCCTCTGTTCTGACTGCAGAGATCAAGGCCCTCCTAGGTGTGTCCGGTaGACAGGGTCCAGCTGGAAT +
Preference number: 5 (lower is better)
Translates to: PETPLCTPLCSDCRDQGPPRCVR*TGSSWN
Trigger: ATTCCAGCTGGACCCTGTCAACCGGACACACCTAGG...AGGGCCTTGATCTCTGCAGTCAGAACAGAGGGGTGTGCACAGGGGAGTTTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR CAA 90 bp GGCAGGCCCACCTCCTCGGGGCAACTTTGCGTTTCCTTGGAGGGAAGGGAGGTGATTGTGGTTCACTCTTaGGATGGAACCAGTCCCGTT +
Preference number: 5 (lower is better)
Translates to: GRPTSSGQLCVSLEGREVIVVHS*DGTSPV
Trigger: AACGGGACTGGTTCCATCCAAAGAGTGAACCACAAT...CACCTCCCTTCCCTCCAAGGAAACGCAAAGTTGCCCCGAGGAGGTGGGCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR CAA 90 bp CCTGCAGAGGCGGCTCGGAGTCCCGAGTCTTCTAGTCAGTTGAACAAGCATTCAAGCCTGTTCACGGAGTaGCTGGCGCTGCACATGTAC +
Preference number: 5 (lower is better)
Translates to: PAEAARSPESSSQLNKHSSLFTE*LALHMY
Trigger: GTACATGTGCAGCGCCAGCAACTCCGTGAACAGGCT...TGAATGCTTGTTCAACTGACTAGAAGACTCGGGACTCCGAGCCGCCTCTGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR CAA 90 bp AGGCGCCACGTCCCTTGTGCTGGCGGGTCCCCCGTTGGCTTTCTTGCCGTTTCTCCTCCACCTGGAAATTaGATCTTTACTGTGCTCAGT +
Preference number: 5 (lower is better)
Translates to: RRHVPCAGGSPVGFLAVSPPPGN*IFTVLS
Trigger: ACTGAGCACAGTAAAGATCAAATTTCCAGGTGGAGG...AGAAACGGCAAGAAAGCCAACGGGGGACCCGCCAGCACAAGGGACGTGGCGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR CAA 90 bp CATTCACTGGAGAATCCGTGGTTTCTTGTGCAGGATCCAAACCTGGGGTGGTGGCCTCTGTTGGTGCCTTaGCTCCCTTCCGCTGCACCA +
Preference number: 5 (lower is better)
Translates to: HSLENPWFLVQDPNLGWWPLLVP*LPSAAP
Trigger: TGGTGCAGCGGAAGGGAGCAAAGGCACCAACAGAGG...CCACCACCCCAGGTTTGGATCCTGCACAAGAAACCACGGATTCTCCAGTGAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640497.1
CDS CCA 90 bp GACATTCACTGGAGAATCCGTGGTTTCTTGTGCAGGATCCAAACCTaGGGTGGTGGTTGGTGTTTCAAGGCCTGCCGGTGCCTCAGCATC +
Preference number: 5 (lower is better)
Translates to: DIHWRIRGFLCRIQT*GGGWCFKACRCLSI
Trigger: GATGCTGAGGCACCGGCAGGCCTTGAAACACCAACCACCACCCCAGGTTTGGATCCTGCACAAGAAACCACGGATTCTCCAGTGAATGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638511.1
ENST00000640497.1
CDS-3UTR CAA 90 bp AGCTGCTCTCTGGCCTCCGCGGGCAGAGCTCTGCTTATGACTTCGTCTTCCAGAAGAATCCGTGGTTTCTaGTGCAGGATCCAAACCTGG +
Preference number: 5 (lower is better)
Translates to: SCSLASAGRALLMTSSSRRIRGF*CRIQTW
Trigger: CCAGGTTTGGATCCTGCACAAGAAACCACGGATTCT...TCTGGAAGACGAAGTCATAAGCAGAGCTCTGCCCGCGGAGGCCAGAGAGCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR CAA 90 bp CATTCACTGGAGAATCCGTGGTTTCTTGTGCAGGATCCAAACCTGGGGTGGTGGCGGCTGATGGTGACATaGGGAGGAGCTGGATATCCC +
Preference number: 5 (lower is better)
Translates to: HSLENPWFLVQDPNLGWWRLMVT*GGAGYP
Trigger: GGGATATCCAGCTCCTCCCAATGTCACCATCAGCCG...CCACCACCCCAGGTTTGGATCCTGCACAAGAAACCACGGATTCTCCAGTGAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640497.1
CDS-3UTR CAA 90 bp CATTCACTGGAGAATCCGTGGTTTCTTGTGCAGGATCCAAACCTGGGGTGGTGGTCTGGAACCCCTCTGTaGGTGCCTTTGCTCCCTTCC +
Preference number: 5 (lower is better)
Translates to: HSLENPWFLVQDPNLGWWSGTPL*VPLLPS
Trigger: GGAAGGGAGCAAAGGCACCAACAGAGGGGTTCCAGA...CCACCACCCCAGGTTTGGATCCTGCACAAGAAACCACGGATTCTCCAGTGAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640497.1
CDS-3UTR CAA 90 bp ACATTCACTGGAGAATCCGTGGTTTCTTGTGCAGGATCCAAACCTGGGGTGGTGAACCTGGGGTGGTGGTaGGTGTTTCAAGGCCTGCCG +
Preference number: 5 (lower is better)
Translates to: TFTGESVVSCAGSKPGVVNLGWW*VFQGLP
Trigger: CGGCAGGCCTTGAAACACCAACCACCACCCCAGGTT...CACCACCCCAGGTTTGGATCCTGCACAAGAAACCACGGATTCTCCAGTGAATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640497.1
CDS CCA 90 bp GACATTCACTGGAGAATCCGTGGTTTCTTGTGCAGGATCCAAACCTaGGGTGGTGGTTGGTGTTTCAAGGCGGGGGAAAGTCTCTGGGTG +
Preference number: 5 (lower is better)
Translates to: DIHWRIRGFLCRIQT*GGGWCFKAGESLWV
Trigger: CACCCAGAGACTTTCCCCCGCCTTGAAACACCAACCACCACCCCAGGTTTGGATCCTGCACAAGAAACCACGGATTCTCCAGTGAATGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR CAA 90 bp CACTGCAGCGTCAGTGATGTTCGTAAGCTATGGTTGAGCAAAGGAACACACACCGTAGAGAGGCCACCGTaGCTACCACCATTCCCGTGC +
Preference number: 5 (lower is better)
Translates to: HCSVSDVRKLWLSKGTHTVERPP*LPPFPC
Trigger: GCACGGGAATGGTGGTAGCAACGGTGGCCTCTCTAC...GGTGTGTGTTCCTTTGCTCAACCATAGCTTACGAACATCACTGACGCTGCAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS GCA 90 bp AGTCACTGTGATGGTGACATTCACTGGAGAATCCGTGGTTTCTTGTaGAGGATCCAAACCTGGGGTGGTGGTTGGTGTTTCAAGGCGGGG +
Preference number: 5 (lower is better)
Translates to: SHCDGDIHWRIRGFL*RIQTWGGGWCFKAG
Trigger: CCCCGCCTTGAAACACCAACCACCACCCCAGGTTTGGATCCTGCACAAGAAACCACGGATTCTCCAGTGAATGTCACCATCACAGTGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR CAA 90 bp CCTGAAACTCCCCTGTGCACACCCCTCTGTTCTGACTGCAGAGATCAAGGCCCTGTTCGTAAGCTATGGTaGAGCAAAGGAACACACACC +
Preference number: 5 (lower is better)
Translates to: PETPLCTPLCSDCRDQGPVRKLW*SKGTHT
Trigger: GGTGTGTGTTCCTTTGCTCAACCATAGCTTACGAAC...AGGGCCTTGATCTCTGCAGTCAGAACAGAGGGGTGTGCACAGGGGAGTTTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR CAA 90 bp CTGTCTTCCACAAGGTGGGCCAGGGCTTCTCTTGTAACCATGTCACTTAGGGACCCCCCGTTGGCTTTCTaGCCGTTTCTTCTCATCTGT +
Preference number: 5 (lower is better)
Translates to: LSSTRWARASLVTMSLRDPPLAF*PFLLIC
Trigger: ACAGATGAGAAGAAACGGCAAGAAAGCCAACGGGGG...GTCCCTAAGTGACATGGTTACAAGAGAAGCCCTGGCCCACCTTGTGGAAGACAG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR CAA 90 bp CACTGCAGCGTCAGTGATGTTCGTAAGCTATGGTTGAGCAAAGGAACACACACCCGGCTGATGGTGACATaGGGAGGAGCTGGATATCTC +
Preference number: 5 (lower is better)
Translates to: HCSVSDVRKLWLSKGTHTRLMVT*GGAGYL
Trigger: GAGATATCCAGCTCCTCCCAATGTCACCATCAGCCG...GGTGTGTGTTCCTTTGCTCAACCATAGCTTACGAACATCACTGACGCTGCAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR CAA 90 bp GTGGTTCACTCTTTGGATGGAACCAGTCCCGTTCCGTATGCTGTGATCTATCCCTACCATGGCTTTCACTaGCCCTCAGACACCCAGAGA +
Preference number: 5 (lower is better)
Translates to: VVHSLDGTSPVPYAVIYPYHGFH*PSDTQR
Trigger: TCTCTGGGTGTCTGAGGGCAAGTGAAAGCCATGGTA...GGGATAGATCACAGCATACGGAACGGGACTGGTTCCATCCAAAGAGTGAACCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR CAA 90 bp TACCATGGCTTTCACTTGCCCTCAGACACCCAGAGATCCCTGTCTCCCCATTGTTACACATCTCTAGGCTaGTCTGACCAGAAAGCCAGC +
Preference number: 5 (lower is better)
Translates to: YHGFHLPSDTQRSLSPHCYTSLG*SDQKAS
Trigger: GCTGGCTTTCTGGTCAGACAAGCCTAGAGATGTGTA...ACAATGGGGAGACAGGGATCTCTGGGTGTCTGAGGGCAAGTGAAAGCCATGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR CAA 90 bp ACCAGTCCCGTTCCGTATGCTGTGATCTATCCCTGCCGTGGAATTCCTCCGAGGGGGAATACTCCCTGTTaGTACAACGCTGCTTATAGT +
Preference number: 5 (lower is better)
Translates to: TSPVPYAVIYPCRGIPPRGNTPC*YNAAYS
Trigger: ACTATAAGCAGCGTTGTACAAACAGGGAGTATTCCC...CCTCGGAGGAATTCCACGGCAGGGATAGATCACAGCATACGGAACGGGACTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR CAA 90 bp AGCTGCTCTCTGGCCTCCGCGGGCAGAGCTCTGCTTATGACTTCGTCTTCCAGATCTTTCTGGGTGTTTTaGTCGAATGAGTCTATGAAG +
Preference number: 5 (lower is better)
Translates to: SCSLASAGRALLMTSSSRSFWVF*SNESMK
Trigger: CTTCATAGACTCATTCGACAAAAACACCCAGAAAGA...TCTGGAAGACGAAGTCATAAGCAGAGCTCTGCCCGCGGAGGCCAGAGAGCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR CAA 90 bp CACTGTGATGGTGACATTCACTGGAGAATCCGTGGTTTCTTGTGCAGGATCCAAAGAATCCGTGGTTTCTaGTGCAGGATCCAAACCTGG +
Preference number: 5 (lower is better)
Translates to: HCDGDIHWRIRGFLCRIQRIRGF*CRIQTW
Trigger: CCAGGTTTGGATCCTGCACAAGAAACCACGGATTCT...TTGGATCCTGCACAAGAAACCACGGATTCTCCAGTGAATGTCACCATCACAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640497.1
CDS-3UTR CAA 90 bp GCTATGGTTGAGCAAAGGAACACACACCTACACACCTTGCTTCTTCCCACTAGCAACAGACACACACACTaGGAGCTAGTGAGTCATGCT +
Preference number: 5 (lower is better)
Translates to: AMVEQRNTHLHTLLLPTSNRHTH*ELVSHA
Trigger: AGCATGACTCACTAGCTCCAAGTGTGTGTGTCTGTT...GCTAGTGGGAAGAAGCAAGGTGTGTAGGTGTGTGTTCCTTTGCTCAACCATAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR CAA 90 bp GTTCGTAAGCTATGGTTGAGCAAAGGAACACACACCTACACACCTTGCTTCTTCAGCCAGCAAAGTCTTTaGCATCGGGTGTGGCCCTTT +
Preference number: 5 (lower is better)
Translates to: VRKLWLSKGTHTYTPCFFSQQSL*HRVWPF
Trigger: AAAGGGCCACACCCGATGCAAAAGACTTTGCTGGCT...GAAGAAGCAAGGTGTGTAGGTGTGTGTTCCTTTGCTCAACCATAGCTTACGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR CAA 90 bp ATTTTTCCATACTGCTTTCCAAAAGCATTGTGGTTCACTCTTTGGATGGAACCAGTTACTCAGTCGCACTaGAGGCTTGGACACCGGCAC +
Preference number: 5 (lower is better)
Translates to: IFPYCFPKALWFTLWMEPVTQSH*RLGHRH
Trigger: GTGCCGGTGTCCAAGCCTCAAGTGCGACTGAGTAAC...TGGTTCCATCCAAAGAGTGAACCACAATGCTTTTGGAAAGCAGTATGGAAAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR CAA 90 bp ATTTTTCCATACTGCTTTCCAAAAGCATTGTGGTTCACTCTTTGGATGGAACCACCAGTCCTGAGAGCTTaGAGGGTAGCCGAAACCCCT +
Preference number: 5 (lower is better)
Translates to: IFPYCFPKALWFTLWMEPPVLRA*RVAETP
Trigger: AGGGGTTTCGGCTACCCTCAAAGCTCTCAGGACTGG...TGGTTCCATCCAAAGAGTGAACCACAATGCTTTTGGAAAGCAGTATGGAAAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR CAA 90 bp CTGCTTTCCAAAAGCATTGTGGTTCACTCTTTGGATGGAACCAGTCCCGTTCCGTGCTTTCCAAAAGCATaGTGGTTCACTCTTTGGATG +
Preference number: 5 (lower is better)
Translates to: LLSKSIVVHSLDGTSPVPCFPKA*WFTLWM
Trigger: CATCCAAAGAGTGAACCACAATGCTTTTGGAAAGCA...CGGAACGGGACTGGTTCCATCCAAAGAGTGAACCACAATGCTTTTGGAAAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR CAA 90 bp CTATTTTTACCATTAACCGAGCGCCACATGTTTATGAACTTCAGGATAGAAATTCCTCTGCTCCGTATCTaGTGGGCTGCGACTCCTGGA +
Preference number: 5 (lower is better)
Translates to: LFLPLTERHMFMNFRIEIPLLRI*WAATPG
Trigger: TCCAGGAGTCGCAGCCCACAAGATACGGAGCAGAGG...AATTTCTATCCTGAAGTTCATAAACATGTGGCGCTCGGTTAATGGTAAAAATAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR CAA 90 bp CACTGCAGCGTCAGTGATGTTCGTAAGCTATGGTTGAGCAAAGGAACACACACCTCGGGTGTGGCCCTTTaGTATTTTATTTCCCATATT +
Preference number: 5 (lower is better)
Translates to: HCSVSDVRKLWLSKGTHTSGVAL*YFISHI
Trigger: AATATGGGAAATAAAATACAAAAGGGCCACACCCGA...GGTGTGTGTTCCTTTGCTCAACCATAGCTTACGAACATCACTGACGCTGCAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR CAA 90 bp ACTGTTAACTCATTTAACCCCCACAACTCATCTACAAAGTTGGCATTAAAATCCCAACTTTGCGTTTCCTaGGAGGGAAGGGAGGTGGGT +
Preference number: 5 (lower is better)
Translates to: TVNSFNPHNSSTKLALKSQLCVS*EGREVG
Trigger: ACCCACCTCCCTTCCCTCCAAGGAAACGCAAAGTTG...GGATTTTAATGCCAACTTTGTAGATGAGTTGTGGGGGTTAAATGAGTTAACAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR CAA 90 bp GCTATGGTTGAGCAAAGGAACACACACCTACACACCTTGCTTCTTCCCACTAGCAGGGTGCAAGTTACATaGCAATGTTCTAAACCTTTT +
Preference number: 5 (lower is better)
Translates to: AMVEQRNTHLHTLLLPTSRVQVT*QCSKPF
Trigger: AAAAGGTTTAGAACATTGCAATGTAACTTGCACCCT...GCTAGTGGGAAGAAGCAAGGTGTGTAGGTGTGTGTTCCTTTGCTCAACCATAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR CAA 90 bp ATAGCCCCTGAAGGTGGGAATACTCCCTGTTTGTACAACGCTGCTTATAGTTTGCCTTGTGAAAACGTTTaGTTTTACTGCCCTAAGAAA +
Preference number: 5 (lower is better)
Translates to: IAPEGGNTPCLYNAAYSLPCENV*FYCPKK
Trigger: TTTCTTAGGGCAGTAAAACAAAACGTTTTCACAAGG...CAAACTATAAGCAGCGTTGTACAAACAGGGAGTATTCCCACCTTCAGGGGCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR CAA 90 bp AAGCATTCATTTGTGTTTTCACCCAGATTACAGACACACACACAAACAGACACACACTGTGCTCGGTGCTaGTTACTGTTAACTCATTTA +
Preference number: 5 (lower is better)
Translates to: KHSFVFSPRLQTHTQTDTHCARC*LLLTHL
Trigger: TAAATGAGTTAACAGTAACAAGCACCGAGCACAGTG...TGTGTCTGTTTGTGTGTGTGTCTGTAATCTGGGTGAAAACACAAATGAATGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR CAA 90 bp AAGCATTCATTTGTGTTTTCACCCAGATTACAGACACACACACAAACAGACACATCAGTGATCACGAAATaGGTCAAGCCTATTCATGTT +
Preference number: 5 (lower is better)
Translates to: KHSFVFSPRLQTHTQTDTSVITK*VKPIHV
Trigger: AACATGAATAGGCTTGACCAATTTCGTGATCACTGA...TGTGTCTGTTTGTGTGTGTGTCTGTAATCTGGGTGAAAACACAAATGAATGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS-3UTR CAA 90 bp ATTTTTCCATACTGCTTTCCAAAAGCATTGTGGTTCACTCTTTGGATGGAACCAAACTCATCTACAAAGTaGGCATTAAAATCCCCAAGT +
Preference number: 5 (lower is better)
Translates to: IFPYCFPKALWFTLWMEPNSSTK*ALKSPS
Trigger: ACTTGGGGATTTTAATGCCAACTTTGTAGATGAGTT...TGGTTCCATCCAAAGAGTGAACCACAATGCTTTTGGAAAGCAGTATGGAAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS CCA 72 bp CCAGGGGCTGCTGCTGTTCGTCAAGCCAGCCCAGCGTaGCAGGGGGCTCGCCGCCAGGCCACTCGCAGCTCA +
Preference number: 6 (lower is better)
Translates to: PGAAAVRQASPA*QGARRQATRSS
Trigger: TGAGCTGCGAGTGGCCTGGCGGCGAGCCCCCTGCCACGCTGGGCTGGCTTGACGAACAGCAGCAGCCCCTGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000638511.1
ENST00000638636.2
ENST00000640497.1
CDS GCA 72 bp CCCACCAGGGCCTCTCCAAGGCCTCGGGGTGCCCGATaGTGCCAGGCAAAGGTCACGGGCTCTGTGCCCTCC +
Preference number: 6 (lower is better)
Translates to: PTRASPRPRGAR*CQAKVTGSVPS
Trigger: GGAGGGCACAGAGCCCGTGACCTTTGCCTGGCAGCATCGGGCACCCCGAGGCCTTGGAGAGGCCCTGGTGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS GCA 72 bp GCCCCAGCTCCTGGGCCCAGGGCACTGGCCTTCCGCTaGACCAGGAAGCCCGTCAGGTTCCCGGGTCCTAAG +
Preference number: 6 (lower is better)
Translates to: APAPGPRALAFR*TRKPVRFPGPK
Trigger: CTTAGGACCCGGGAACCTGACGGGCTTCCTGGTGCAGCGGAAGGCCAGTGCCCTGGGCCCAGGAGCTGGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS GCA 72 bp CCAGGCAAAGGTCACGGGCTCTGTGCCCTCCCGCACTaGACACGTGGCCACCACGGAGGCTCCCTCCACAGG +
Preference number: 6 (lower is better)
Translates to: PGKGHGLCALPH*TRGHHGGSLHR
Trigger: CCTGTGGAGGGAGCCTCCGTGGTGGCCACGTGTGCAGTGCGGGAGGGCACAGAGCCCGTGACCTTTGCCTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS GCA 72 bp GGGCCTGCAGGAGGTGAACGGCCATCGAGGAGCTGCTaGCGCCCAGGGGCTGCTGCTGTTCGTCAAGCCAGC +
Preference number: 6 (lower is better)
Translates to: GPAGGERPSRSC*RPGAAAVRQAS
Trigger: GCTGGCTTGACGAACAGCAGCAGCCCCTGGGCGGCAGCAGCTCCTCGATGGCCGTTCACCTCCTGCAGGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000638511.1
ENST00000638636.2
ENST00000640497.1
CDS TCA 72 bp CTTGAGGCTTGGACACCGGCACCAGCACAGCCAGCGTaGGGTGGGAGTAGGCAGCGTGGAGCTGGCCGCCAG +
Preference number: 6 (lower is better)
Translates to: LEAWTPAPAQPA*GGSRQRGAGRQ
Trigger: CTGGCGGCCAGCTCCACGCTGCCTACTCCCACCTCACGCTGGCTGTGCTGGTGCCGGTGTCCAAGCCTCAAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS GCA 72 bp AGGTGCCCCTGTGGTGTGCCGGGTCAGCATCGTAGATaGCCAGGCGCAGCTGGGCACCCTCAGGGTGCAGCA +
Preference number: 6 (lower is better)
Translates to: RCPCGVPGQHRR*PGAAGHPQGAA
Trigger: TGCTGCACCCTGAGGGTGCCCAGCTGCGCCTGGGCATCTACGATGCTGACCCGGCACACCACAGGGGCACCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS GCA 72 bp GTTGCGGGCCACGCATTGGTAGGTGCCCCTGTGGTGTaGCGGGTCAGCATCGTAGATGCCCAGGCGCAGCTG +
Preference number: 6 (lower is better)
Translates to: VAGHALVGAPVV*RVSIVDAQAQL
Trigger: CAGCTGCGCCTGGGCATCTACGATGCTGACCCGGCACACCACAGGGGCACCTACCAATGCGTGGCCCGCAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS CCA 72 bp GATGTCACTAGCTGCTGTCTCCCACGCCCCAGCTCCTaGGCCCAGGGCACTGGCCTTCCGCTGCACCAGGAA +
Preference number: 6 (lower is better)
Translates to: DVTSCCLPRPSS*AQGTGLPLHQE
Trigger: TTCCTGGTGCAGCGGAAGGCCAGTGCCCTGGGCCCAGGAGCTGGGGCGTGGGAGACAGCAGCTAGTGACATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS CAA 90 bp TTCCTCAGACTCACGACTCCCAGAGCCGAGGCGATGGCCTCCACCTaGGACATGGCTCCATCGGTGACGGCCACAGGCCGGGGAACCAGG +
Preference number: 6 (lower is better)
Translates to: FLRLTTPRAEAMAST*DMAPSVTATGRGTR
Trigger: CCTGGTTCCCCGGCCTGTGGCCGTCACCGATGGAGCCATGTCCAAGGTGGAGGCCATCGCCTCGGCTCTGGGAGTCGTGAGTCTGAGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS CAA 90 bp CAGGTGAGTGCCCCGGCAGGTGAACTCTCTGCCAGCCAGATCTTCTaGGGCCTGCAGGAGGTGAACGGCCATCGAGGAGCTGCTGCCGCC +
Preference number: 6 (lower is better)
Translates to: QVSAPAGELSASQIF*GLQEVNGHRGAAAA
Trigger: GGCGGCAGCAGCTCCTCGATGGCCGTTCACCTCCTGCAGGCCCAAGAAGATCTGGCTGGCAGAGAGTTCACCTGCCGGGGCACTCACCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000638511.1
ENST00000638636.2
ENST00000640497.1
CDS TCA 72 bp GCTCCCTCCACAGGGGACGGGTTACTCAGTCGCACTTaGGGCTTGGACACCGGCACCAGCACAGCCAGCGTG +
Preference number: 6 (lower is better)
Translates to: APSTGDGLLSRT*GLDTGTSTASV
Trigger: CACGCTGGCTGTGCTGGTGCCGGTGTCCAAGCCTCAAGTGCGACTGAGTAACCCGTCCCCTGTGGAGGGAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS CAA 72 bp GGCTCCCTCCACAGGGGACGGGTTACTCAGTCGCACTaGAGGCTTGGACACCGGCACCAGCACAGCCAGCGT +
Preference number: 6 (lower is better)
Translates to: GSLHRGRVTQSH*RLGHRHQHSQR
Trigger: ACGCTGGCTGTGCTGGTGCCGGTGTCCAAGCCTCAAGTGCGACTGAGTAACCCGTCCCCTGTGGAGGGAGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS GCA 72 bp CCAGCAGCACACTCTGACTGCTATTGCCCACGGCGTTaGGGGCCACGCATTGGTAGGTGCCCCTGTGGTGTG +
Preference number: 6 (lower is better)
Translates to: PAAHSDCYCPRR*GPRIGRCPCGV
Trigger: CACACCACAGGGGCACCTACCAATGCGTGGCCCGCAACGCCGTGGGCAATAGCAGTCAGAGTGTGCTGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS CCA 72 bp TCGCCGCCAGGCCACTCGCAGCTCAGCATGATGAACTaGTCCCCCATTGTGGCTGTGCTCCAGCAGGTAGGC +
Preference number: 6 (lower is better)
Translates to: SPPGHSQLSMMN*SPIVAVLQQVG
Trigger: GCCTACCTGCTGGAGCACAGCCACAATGGGGGACCAGTTCATCATGCTGAGCTGCGAGTGGCCTGGCGGCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000638511.1
ENST00000638636.2
CDS CCA 72 bp GCACCAGGAAGCCCGTCAGGTTCCCGGGTCCTAAGATaGCCCATTGAAGCTGCACCTCTCTCCGGTGCCTCC +
Preference number: 6 (lower is better)
Translates to: APGSPSGSRVLR*PIEAAPLSGAS
Trigger: GGAGGCACCGGAGAGAGGTGCAGCTTCAATGGGCCATCTTAGGACCCGGGAACCTGACGGGCTTCCTGGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638636.2
ENST00000640497.1
CDS CAA 90 bp CTGGGTGCCGGGCAGCATACTGGAACACCAGTAGAGAGGCCACCGTaGCTACCACCATTCCCGTGCCTGCTGCACCCAACACCGCTGGGT +
Preference number: 6 (lower is better)
Translates to: LGAGQHTGTPVERPP*LPPFPCLLHPTPLG
Trigger: ACCCAGCGGTGTTGGGTGCAGCAGGCACGGGAATGGTGGTAGCAACGGTGGCCTCTCTACTGGTGTTCCAGTATGCTGCCCGGCACCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS GCA 72 bp GGAAGGCCCCGTCACTGCTCAGCCTGTTCACGGAGTTaGTGGCGCTGCACATGTACCACCCTAGGTGTGTCC +
Preference number: 6 (lower is better)
Translates to: GRPRHCSACSRS*WRCTCTTLGVS
Trigger: GGACACACCTAGGGTGGTACATGTGCAGCGCCAGCAACTCCGTGAACAGGCTGAGCAGTGACGGGGCCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS CCA 72 bp AGGCCCCGTCACTGCTCAGCCTGTTCACGGAGTTGCTaGCGCTGCACATGTACCACCCTAGGTGTGTCCGGT +
Preference number: 6 (lower is better)
Translates to: RPRHCSACSRSC*RCTCTTLGVSG
Trigger: ACCGGACACACCTAGGGTGGTACATGTGCAGCGCCAGCAACTCCGTGAACAGGCTGAGCAGTGACGGGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS CCA 72 bp AGGCGGGGGAAAGTCTCTGGGTGCCGGGCAGCATACTaGAACACCAGTAGAGAGGCCACCGTTGCTACCACC +
Preference number: 6 (lower is better)
Translates to: RRGKVSGCRAAY*NTSREATVATT
Trigger: GGTGGTAGCAACGGTGGCCTCTCTACTGGTGTTCCAGTATGCTGCCCGGCACCCAGAGACTTTCCCCCGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS CAA 90 bp ACGGAGTTGCTGGCGCTGCACATGTACCACCCTAGGTGTGTCCGGTaGACAGGGTCCAGCTGGAATAGTGGCTCAGTGACCCCCACCAGG +
Preference number: 6 (lower is better)
Translates to: TELLALHMYHPRCVR*TGSSWNSGSVTPTR
Trigger: CCTGGTGGGGGTCACTGAGCCACTATTCCAGCTGGACCCTGTCAACCGGACACACCTAGGGTGGTACATGTGCAGCGCCAGCAACTCCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS TCA 72 bp GCGCAGCTGGGCACCCTCAGGGTGCAGCATGAATCCTaGAGTGCCGGGGTCCACTTTTTGTTGTTGAGGCCC +
Preference number: 6 (lower is better)
Translates to: AQLGTLRVQHES*SAGVHFLLLRP
Trigger: GGGCCTCAACAACAAAAAGTGGACCCCGGCACTTCAGGATTCATGCTGCACCCTGAGGGTGCCCAGCTGCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS TCA 72 bp GGAGCTGGATATCTCAGGACCTCCAGCAGCACACTCTaGCTGCTATTGCCCACGGCGTTGCGGGCCACGCAT +
Preference number: 6 (lower is better)
Translates to: GAGYLRTSSSTL*LLLPTALRATH
Trigger: ATGCGTGGCCCGCAACGCCGTGGGCAATAGCAGTCAGAGTGTGCTGCTGGAGGTCCTGAGATATCCAGCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS CCA 72 bp TACCACCCTAGGTGTGTCCGGTTGACAGGGTCCAGCTaGAATAGTGGCTCAGTGACCCCCACCAGGGCCTCT +
Preference number: 6 (lower is better)
Translates to: YHPRCVRLTGSS*NSGSVTPTRAS
Trigger: AGAGGCCCTGGTGGGGGTCACTGAGCCACTATTCCAGCTGGACCCTGTCAACCGGACACACCTAGGGTGGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS CAA 72 bp AGGAAGGCCCCGTCACTGCTCAGCCTGTTCACGGAGTaGCTGGCGCTGCACATGTACCACCCTAGGTGTGTC +
Preference number: 6 (lower is better)
Translates to: RKAPSLLSLFTE*LALHMYHPRCV
Trigger: GACACACCTAGGGTGGTACATGTGCAGCGCCAGCAACTCCGTGAACAGGCTGAGCAGTGACGGGGCCTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS CAA 90 bp ATGACGTCCAGGAAGGCCCCGTCACTGCTCAGCCTGTTCACGGAGTaGCTGGCGCTGCACATGTACCACCCTAGGTGTGTCCGGTTGACA +
Preference number: 6 (lower is better)
Translates to: MTSRKAPSLLSLFTE*LALHMYHPRCVRLT
Trigger: TGTCAACCGGACACACCTAGGGTGGTACATGTGCAGCGCCAGCAACTCCGTGAACAGGCTGAGCAGTGACGGGGCCTTCCTGGACGTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS CAA 90 bp GACACGGCCAGCTCTGGCGATGACATAGGTAGGCCCCGTGTGGACTaGCGTGTGGTCACGGAGCCACACATAGTGACTAGGTGGGTTGGA +
Preference number: 6 (lower is better)
Translates to: DTASSGDDIGRPRVD*RVVTEPHIVTRWVG
Trigger: TCCAACCCACCTAGTCACTATGTGTGGCTCCGTGACCACACGCAAGTCCACACGGGGCCTACCTATGTCATCGCCAGAGCTGGCCGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS GCA 72 bp CTGGATATCTCAGGACCTCCAGCAGCACACTCTGACTaGTATTGCCCACGGCGTTGCGGGCCACGCATTGGT +
Preference number: 6 (lower is better)
Translates to: LDISGPPAAHSD*YCPRRCGPRIG
Trigger: ACCAATGCGTGGCCCGCAACGCCGTGGGCAATAGCAGTCAGAGTGTGCTGCTGGAGGTCCTGAGATATCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS GCA 72 bp GGGGTCCGCTGGTATCTTCACCTCAGAGGGATGTCCTaGAGTGTGGTGATTCAGAGCCAGGATGCGGAAGGC +
Preference number: 6 (lower is better)
Translates to: GVRWYLHLRGMS*SVVIQSQDAEG
Trigger: GCCTTCCGCATCCTGGCTCTGAATCACCACACTGCAGGACATCCCTCTGAGGTGAAGATACCAGCGGACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS GCA 72 bp GTGGTTGGTGTTTCAAGGCGGGGGAAAGTCTCTGGGTaGCGGGCAGCATACTGGAACACCAGTAGAGAGGCC +
Preference number: 6 (lower is better)
Translates to: VVGVSRRGKVSG*RAAYWNTSREA
Trigger: GGCCTCTCTACTGGTGTTCCAGTATGCTGCCCGGCACCCAGAGACTTTCCCCCGCCTTGAAACACCAACCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS CAA 72 bp CTGGCGCTGCACATGTACCACCCTAGGTGTGTCCGGTaGACAGGGTCCAGCTGGAATAGTGGCTCAGTGACC +
Preference number: 6 (lower is better)
Translates to: LALHMYHPRCVR*TGSSWNSGSVT
Trigger: GGTCACTGAGCCACTATTCCAGCTGGACCCTGTCAACCGGACACACCTAGGGTGGTACATGTGCAGCGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS CAA 72 bp GGGCAGCATACTGGAACACCAGTAGAGAGGCCACCGTaGCTACCACCATTCCCGTGCCTGCTGCACCCAACA +
Preference number: 6 (lower is better)
Translates to: GQHTGTPVERPP*LPPFPCLLHPT
Trigger: TGTTGGGTGCAGCAGGCACGGGAATGGTGGTAGCAACGGTGGCCTCTCTACTGGTGTTCCAGTATGCTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS CAA 72 bp AGCTCTGGCGATGACATAGGTAGGCCCCGTGTGGACTaGCGTGTGGTCACGGAGCCACACATAGTGACTAGG +
Preference number: 6 (lower is better)
Translates to: SSGDDIGRPRVD*RVVTEPHIVTR
Trigger: CCTAGTCACTATGTGTGGCTCCGTGACCACACGCAAGTCCACACGGGGCCTACCTATGTCATCGCCAGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS CCA 72 bp AATCCGTGGTTTCTTGTGCAGGATCCAAACCTGGGGTaGTGGTTGGTGTTTCAAGGCCTGCCGGTGCCTCAG +
Preference number: 6 (lower is better)
Translates to: NPWFLVQDPNLG*WLVFQGLPVPQ
Trigger: CTGAGGCACCGGCAGGCCTTGAAACACCAACCACCACCCCAGGTTTGGATCCTGCACAAGAAACCACGGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638511.1
ENST00000640497.1
CDS CCA 72 bp AATCCGTGGTTTCTTGTGCAGGATCCAAACCTGGGGTaGTGGTTGGTGTTTCAAGGCGGGGGAAAGTCTCTG +
Preference number: 6 (lower is better)
Translates to: NPWFLVQDPNLG*WLVFQGGGKSL
Trigger: CAGAGACTTTCCCCCGCCTTGAAACACCAACCACCACCCCAGGTTTGGATCCTGCACAAGAAACCACGGATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638636.2
CDS GCA 72 bp GCCTATTTGCATCTTCCTCTTTGGGCCTTATGGTGTTaGAGTCACTGTGATGGTGACATTCACTGGAGAATC +
Preference number: 6 (lower is better)
Translates to: AYLHLPLWALWC*SHCDGDIHWRI
Trigger: GATTCTCCAGTGAATGTCACCATCACAGTGACTGCAACACCATAAGGCCCAAAGAGGAAGATGCAAATAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638511.1
ENST00000638636.2