Pregenerated sensors for VSIG10L (Homo sapiens)
Ensembl gene IDs: ENSG00000186806Ensembl transcript IDs: ENST00000335624.4, ENST00000335624.5, ENST00000600663.1
Found 64 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAGGGTCCAACCCTCAGTCATAGCAGGCCCTGGCTGCTGCTGGAGTaGAATAGGAAGTTCTGGCCCAAAACGCCCTGTGCAGGGCAGACC | + |
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Preference number: 1 (lower is better) Translates to: QGPTLSHSRPWLLLE*NRKFWPKTPCAGQT Trigger: GGTCTGCCCTGCACAGGGCGTTTTGGGCCAGAACTTCCTATTTCACTCCAGCAGCAGCCAGGGCCTGCTATGACTGAGGGTTGGACCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335624.4 |
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| 3UTR CCA 90 bp | CCTACAGGTGGCAAAGTGAATGTAAGGGGACCTTTTCAGAGAACATaGCCAAGCTCCCTCTCTAGCTCAGAGCAACACAGCAAGCCCTGC | + |
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Preference number: 1 (lower is better) Translates to: PTGGKVNVRGPFQRT*PSSLSSSEQHSKPC Trigger: GCAGGGCTTGCTGTGTTGCTCTGAGCTAGAGAGGGAGCTTGGCCATGTTCTCTGAAAAGGTCCCCTTACATTCACTTTGCCACCTGTAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335624.4 |
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| 3UTR TCA 90 bp | GAACGGTCGTCTAAGATGGTAACTGCTACTCTTAGACTTGAGAAATaGATGACATATGGGAAAAAGAAGTGTTATAAGCACAGCAAACTC | + |
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Preference number: 1 (lower is better) Translates to: ERSSKMVTATLRLEK*MTYGKKKCYKHSKL Trigger: GAGTTTGCTGTGCTTATAACACTTCTTTTTCCCATATGTCATTCATTTCTCAAGTCTAAGAGTAGCAGTTACCATCTTAGACGACCGTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000335624.4 |
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| 3UTR-3UTR GCA 90 bp | ACACAGCAAGCCCTGCCTGTCTGCTGCAGAGGCTTGGAGGTTGTGCAAACCACAGCCCAAAACGCCCTGTaGAGGGCAGACCACTGGCTC | + |
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Preference number: 2 (lower is better) Translates to: TQQALPVCCRGLEVVQTTAQNAL*RADHWL Trigger: GAGCCAGTGGTCTGCCCTGCACAGGGCGTTTTGGGC...TGTGGTTTGCACAACCTCCAAGCCTCTGCAGCAGACAGGCAGGGCTTGCTGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335624.4 |
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| 3UTR-3UTR GCA 90 bp | CACAGCAAGCCCTGCCTGTCTGCTGCAGAGGCTTGGAGGTTGTGCAAACCACACATAGCAGGCCCTGGCTaGTGCTGGAGTGAAATAGGA | + |
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Preference number: 2 (lower is better) Translates to: HSKPCLSAAEAWRLCKPHIAGPG*CWSEIG Trigger: TCCTATTTCACTCCAGCAGCAGCCAGGGCCTGCTAT...GTGTGGTTTGCACAACCTCCAAGCCTCTGCAGCAGACAGGCAGGGCTTGCTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000335624.4 |
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| 3UTR-3UTR TCA 90 bp | CTGATCTGTTTTAAGATGAAGATGCTGGGAGCTGGATGGGGTGTGGCCTACAGGGCAGACCACTGGCTCTaGTCACACCTGTGTGGCTGC | + |
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Preference number: 2 (lower is better) Translates to: LICFKMKMLGAGWGVAYRADHWL*SHLCGC Trigger: GCAGCCACACAGGTGTGATCAGAGCCAGTGGTCTGC...CCTGTAGGCCACACCCCATCCAGCTCCCAGCATCTTCATCTTAAAACAGATCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335624.4 |
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| 3UTR-3UTR GCA 90 bp | CTGATCTGTTTTAAGATGAAGATGCTGGGAGCTGGATGGGGTGTGGCCTACAGGCAAGCCCTGCCTGTCTaGTGCAGAGGCTTGGAGGTT | + |
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Preference number: 2 (lower is better) Translates to: LICFKMKMLGAGWGVAYRQALPV*CRGLEV Trigger: AACCTCCAAGCCTCTGCAGCAGACAGGCAGGGCTTG...CCTGTAGGCCACACCCCATCCAGCTCCCAGCATCTTCATCTTAAAACAGATCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335624.4 |
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| 3UTR-3UTR GCA 90 bp | CTGATCTGTTTTAAGATGAAGATGCTGGGAGCTGGATGGGGTGTGGCCTACAGGGCAGGCCCTGGCTGCTaGTGGAGTGAAATAGGAAGT | + |
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Preference number: 2 (lower is better) Translates to: LICFKMKMLGAGWGVAYRAGPGC*WSEIGS Trigger: ACTTCCTATTTCACTCCAGCAGCAGCCAGGGCCTGC...CCTGTAGGCCACACCCCATCCAGCTCCCAGCATCTTCATCTTAAAACAGATCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335624.4 |
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| 3UTR-3UTR TCA 90 bp | AATGTAAGGGGACCTTTTCAGAGAACATGGCCAAGCTCCCTCTCTAGCTCAGAGTGGCTGCTGCTGGAGTaGAATAGGAAGTTCTGGCCC | + |
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Preference number: 2 (lower is better) Translates to: NVRGPFQRTWPSSLSSSEWLLLE*NRKFWP Trigger: GGGCCAGAACTTCCTATTTCACTCCAGCAGCAGCCA...CTCTGAGCTAGAGAGGGAGCTTGGCCATGTTCTCTGAAAAGGTCCCCTTACATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335624.4 |
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| 3UTR-3UTR CCA 90 bp | CTTTTCAGAGAACATGGCCAAGCTCCCTCTCTAGCTCAGAGCAACACAGCAAGCGGCCCTGGCTGCTGCTaGAGTGAAATAGGAAGTTCT | + |
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Preference number: 2 (lower is better) Translates to: LFREHGQAPSLAQSNTASGPGCC*SEIGSS Trigger: AGAACTTCCTATTTCACTCCAGCAGCAGCCAGGGCC...GCTTGCTGTGTTGCTCTGAGCTAGAGAGGGAGCTTGGCCATGTTCTCTGAAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335624.4 |
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| 3UTR-3UTR CCA 90 bp | TCAGGAACGGCAAATTCAAGGATTCTGGGACTTAACCCAAGACTAAGGGAGGGGCTGATCACACCTGTGTaGCTGCGCGAACAGTCTTTG | + |
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Preference number: 2 (lower is better) Translates to: SGTANSRILGLNPRLREGLITPV*LREQSL Trigger: CAAAGACTGTTCGCGCAGCCACACAGGTGTGATCAG...CCCCTCCCTTAGTCTTGGGTTAAGTCCCAGAATCCTTGAATTTGCCGTTCCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335624.4 |
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| 3UTR CAA 90 bp | TTAGATCAGCAAGAGTTTCCCAGCCAAGAAGTCACATCTCCTTACTaGCACAAATACAGGAAGACTCTTCTTCTGCAGCAAGAGAGGGAG | + |
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Preference number: 2 (lower is better) Translates to: LDQQEFPSQEVTSPY*HKYRKTLLLQQERE Trigger: CTCCCTCTCTTGCTGCAGAAGAAGAGTCTTCCTGTATTTGTGCAAGTAAGGAGATGTGACTTCTTGGCTGGGAAACTCTTGCTGATCTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000335624.4 |
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| 3UTR GCA 72 bp | TTCAGGGTCCAACCCTCAGTCATAGCAGGCCCTGGCTaGTGCTGGAGTGAAATAGGAAGTTCTGGCCCAAAA | + |
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Preference number: 3 (lower is better) Translates to: FRVQPSVIAGPG*CWSEIGSSGPK Trigger: TTTTGGGCCAGAACTTCCTATTTCACTCCAGCAGCAGCCAGGGCCTGCTATGACTGAGGGTTGGACCCTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000335624.4 |
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| 3UTR CCA 72 bp | CTGATCTGTTTTAAGATGAAGATGCTGGGAGCTGGATaGGGTGTGGCCTACAGGTGGCAAAGTGAATGTAAG | + |
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Preference number: 3 (lower is better) Translates to: LICFKMKMLGAG*GVAYRWQSECK Trigger: CTTACATTCACTTTGCCACCTGTAGGCCACACCCCATCCAGCTCCCAGCATCTTCATCTTAAAACAGATCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335624.4 |
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| 3UTR-3UTR CAA 90 bp | CTGATCTGTTTTAAGATGAAGATGCTGGGAGCTGGATGGGGTGTGGCCTACAGGGTCACATCTCCTTACTaGCACAAATACAGGAAGACT | + |
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Preference number: 3 (lower is better) Translates to: LICFKMKMLGAGWGVAYRVTSPY*HKYRKT Trigger: AGTCTTCCTGTATTTGTGCAAGTAAGGAGATGTGAC...CCTGTAGGCCACACCCCATCCAGCTCCCAGCATCTTCATCTTAAAACAGATCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335624.4 |
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| CDS TCA 90 bp | GTGGTCGCTGCGCACAGGGCGCACGATGAGCAGCTGGTCGCCCTCTaGGCGCATCCGGGGCGTCTCGGCTCCCTCCGATTCCGCCGCCTC | + |
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Preference number: 5 (lower is better) Translates to: VVAAHRAHDEQLVAL*AHPGRLGSLRFRRL Trigger: GAGGCGGCGGAATCGGAGGGAGCCGAGACGCCCCGGATGCGCTCAGAGGGCGACCAGCTGCTCATCGTGCGCCCTGTGCGCAGCGACCAC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335624.5 |
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| CDS TCA 90 bp | CGCGGCAAGTGTACCGGGCGTGGTCGCTGCGCACAGGGCGCACGATaGGCAGCTGGTCGCCCTCTGAGCGCATCCGGGGCGTCTCGGCTC | + |
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Preference number: 5 (lower is better) Translates to: RGKCTGRGRCAQGAR*AAGRPLSASGASRL Trigger: GAGCCGAGACGCCCCGGATGCGCTCAGAGGGCGACCAGCTGCTCATCGTGCGCCCTGTGCGCAGCGACCACGCCCGGTACACTTGCCGCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335624.5 |
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| CDS CCA 90 bp | GTGTACCGGGCGTGGTCGCTGCGCACAGGGCGCACGATGAGCAGCTaGTCGCCCTCTGAGCGCATCCGGGGCGTCTCGGCTCCCTCCGAT | + |
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Preference number: 5 (lower is better) Translates to: VYRAWSLRTGRTMSS*SPSERIRGVSAPSD Trigger: ATCGGAGGGAGCCGAGACGCCCCGGATGCGCTCAGAGGGCGACCAGCTGCTCATCGTGCGCCCTGTGCGCAGCGACCACGCCCGGTACAC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335624.5 |
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| CDS CCA 90 bp | TCCCTGTGGCCGAAGGGGCTGCGGACGCGGCAAGTGTACCGGGCGTaGTCGCTGCGCACAGGGCGCACGATGAGCAGCTGGTCGCCCTCT | + |
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Preference number: 5 (lower is better) Translates to: SLWPKGLRTRQVYRA*SLRTGRTMSSWSPS Trigger: AGAGGGCGACCAGCTGCTCATCGTGCGCCCTGTGCGCAGCGACCACGCCCGGTACACTTGCCGCGTCCGCAGCCCCTTCGGCCACAGGGA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335624.5 |
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| CDS TCA 90 bp | TCCCAATCCAGGCTGAAGTTGCCGATGTGGAGTTTCCGCCCATCTTaGCTGAGCCGCAGGCGACTCCCGCCTCCTGGAGCCAGGGGCCTC | + |
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Preference number: 5 (lower is better) Translates to: SQSRLKLPMWSFRPS*LSRRRLPPPGARGL Trigger: GAGGCCCCTGGCTCCAGGAGGCGGGAGTCGCCTGCGGCTCAGTCAAGATGGGCGGAAACTCCACATCGGCAACTTCAGCCTGGATTGGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000335624.5 ENST00000600663.1 |
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| CDS GCA 90 bp | CTCATACACACCCACCGTGAACTCGTGAGTCTGCTGGGAGACCCCTaGCCGGATGACCTCAGCCGTGTAGACCCCTGCATCGTCCAGCTG | + |
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Preference number: 5 (lower is better) Translates to: LIHTHRELVSLLGDP*PDDLSRVDPCIVQL Trigger: CAGCTGGACGATGCAGGGGTCTACACGGCTGAGGTCATCCGGGCAGGGGTCTCCCAGCAGACTCACGAGTTCACGGTGGGTGTGTATGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335624.5 |
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| CDS GCA 90 bp | ACTGCTGATCAGGGCCCCGCGCTCCACATCCCAAGTCAGCACGGCTaGATCTCTGGCTCTCTGAAGCCTCCACGAGGATATGGAGGGTCC | + |
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Preference number: 5 (lower is better) Translates to: TADQGPALHIPSQHG*ISGSLKPPRGYGGS Trigger: GGACCCTCCATATCCTCGTGGAGGCTTCAGAGAGCCAGAGATGCAGCCGTGCTGACTTGGGATGTGGAGCGCGGGGCCCTGATCAGCAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000335624.5 ENST00000600663.1 |
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| CDS GCA 90 bp | GTCCCTGTAGGTGGAAGTCCTGCCCAGAGCAGGCCCATCTGGCCATaGCTGGATCTCAAAACTGCTGATCAGGGCCCCGCGCTCCACATC | + |
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Preference number: 5 (lower is better) Translates to: VPVGGSPAQSRPIWP*LDLKTADQGPALHI Trigger: GATGTGGAGCGCGGGGCCCTGATCAGCAGTTTTGAGATCCAGGCATGGCCAGATGGGCCTGCTCTGGGCAGGACTTCCACCTACAGGGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000335624.5 ENST00000600663.1 |
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| CDS TCA 90 bp | CCGCGCTCCACATCCCAAGTCAGCACGGCTGCATCTCTGGCTCTCTaGAGCCTCCACGAGGATATGGAGGGTCCAATGAGGGTGATCTGG | + |
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Preference number: 5 (lower is better) Translates to: PRSTSQVSTAASLAL*SLHEDMEGPMRVIW Trigger: CCAGATCACCCTCATTGGACCCTCCATATCCTCGTGGAGGCTTCAGAGAGCCAGAGATGCAGCCGTGCTGACTTGGGATGTGGAGCGCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000335624.5 ENST00000600663.1 |
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| CDS CCA 90 bp | AAACGCCCTGTGCAGGGCAGACCACTGGCTCTGATCACACCTGTGTaGCTGCGCGAACAGTCTTTGAGCCTCCGCCTACAGAGACAACTG | + |
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Preference number: 5 (lower is better) Translates to: KRPVQGRPLALITPV*LREQSLSLRLQRQL Trigger: CAGTTGTCTCTGTAGGCGGAGGCTCAAAGACTGTTCGCGCAGCCACACAGGTGTGATCAGAGCCAGTGGTCTGCCCTGCACAGGGCGTTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000335624.5 ENST00000600663.1 |
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| CDS TCA 90 bp | GAAGGGGGAAACCGGGCTCAAATCTTGGCCCTCAGCAGAAACATTTaGCCAGAAGGACCCAGACATGTTGGAACTCAGGGCCTCAGGAAA | + |
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Preference number: 5 (lower is better) Translates to: EGGNRAQILALSRNI*PEGPRHVGTQGLRK Trigger: TTTCCTGAGGCCCTGAGTTCCAACATGTCTGGGTCCTTCTGGTCAAATGTTTCTGCTGAGGGCCAAGATTTGAGCCCGGTTTCCCCCTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000335624.5 |
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| CDS TCA 90 bp | GAGCTCTTTGAGTCTGAAGAGAAGGCAGAGGAGAAGTTGGTTTGCTaGAGTCCAGAAGAGGCTCTGAGGGTGAGGATCCCTACCAAGGAG | + |
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Preference number: 5 (lower is better) Translates to: ELFESEEKAEEKLVC*SPEEALRVRIPTKE Trigger: CTCCTTGGTAGGGATCCTCACCCTCAGAGCCTCTTCTGGACTTCAGCAAACCAACTTCTCCTCTGCCTTCTCTTCAGACTCAAAGAGCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000335624.5 |
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| CDS TCA 90 bp | CTTTTGAATCCAGGAACTGATCTGGAACTTTCCAGCTGGGAGGTTTaGTGGAGGGAACTTCCACACCCAGCCCCTGGGAAGAGCTCTTTG | + |
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Preference number: 5 (lower is better) Translates to: LLNPGTDLELSSWEV*WRELPHPAPGKSSL Trigger: CAAAGAGCTCTTCCCAGGGGCTGGGTGTGGAAGTTCCCTCCATCAAACCTCCCAGCTGGAAAGTTCCAGATCAGTTCCTGGATTCAAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335624.5 |
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| CDS CCA 90 bp | CTTGGCCCTCAGCAGAAACATTTGACCAGAAGGACCCAGACATGTTaGAACTCAGGGCCTCAGGAAACCAGCTGGAATCAGAGATTCCAG | + |
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Preference number: 5 (lower is better) Translates to: LGPQQKHLTRRTQTC*NSGPQETSWNQRFQ Trigger: CTGGAATCTCTGATTCCAGCTGGTTTCCTGAGGCCCTGAGTTCCAACATGTCTGGGTCCTTCTGGTCAAATGTTTCTGCTGAGGGCCAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000335624.5 |
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| CDS TCA 90 bp | GGCCTCAGGAAACCAGCTGGAATCAGAGATTCCAGCAGAGGCTTTTaGATCCAGGAACTGATCTGGAACTTTCCAGCTGGGAGGTTTGAT | + |
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Preference number: 5 (lower is better) Translates to: GLRKPAGIRDSSRGF*IQELIWNFPAGRFD Trigger: ATCAAACCTCCCAGCTGGAAAGTTCCAGATCAGTTCCTGGATTCAAAAGCCTCTGCTGGAATCTCTGATTCCAGCTGGTTTCCTGAGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335624.5 |
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| CDS TCA 90 bp | GGCCTCAACAGACAGTTTGGTATGGGAGACTTGAGTAGAAATGTTTaGAGCTGGGGTCTTAACAGTGAAGGAAGGCTTGGGGTCTTTGGC | + |
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Preference number: 5 (lower is better) Translates to: GLNRQFGMGDLSRNV*SWGLNSEGRLGVFG Trigger: GCCAAAGACCCCAAGCCTTCCTTCACTGTTAAGACCCCAGCTTCAAACATTTCTACTCAAGTCTCCCATACCAAACTGTCTGTTGAGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335624.5 |
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| CDS GCA 72 bp | GGTACGCGGGTTCGCCGCCAGGCAGGCGTAGGTGCCTaGGTGGCCCGGTCCGACCGCGGGCAGCAGGAGGCG | + |
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Preference number: 6 (lower is better) Translates to: GTRVRRQAGVGA*VARSDRGQQEA Trigger: CGCCTCCTGCTGCCCGCGGTCGGACCGGGCCACGCAGGCACCTACGCCTGCCTGGCGGCGAACCCGCGTACC 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000335624.5 |
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| CDS TCA 72 bp | TGTACCGGGCGTGGTCGCTGCGCACAGGGCGCACGATaGGCAGCTGGTCGCCCTCTGAGCGCATCCGGGGCG | + |
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Preference number: 6 (lower is better) Translates to: CTGRGRCAQGAR*AAGRPLSASGA Trigger: CGCCCCGGATGCGCTCAGAGGGCGACCAGCTGCTCATCGTGCGCCCTGTGCGCAGCGACCACGCCCGGTACA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335624.5 |
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| CDS CCA 72 bp | GCGTGGTCGCTGCGCACAGGGCGCACGATGAGCAGCTaGTCGCCCTCTGAGCGCATCCGGGGCGTCTCGGCT | + |
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Preference number: 6 (lower is better) Translates to: AWSLRTGRTMSS*SPSERIRGVSA Trigger: AGCCGAGACGCCCCGGATGCGCTCAGAGGGCGACCAGCTGCTCATCGTGCGCCCTGTGCGCAGCGACCACGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335624.5 |
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| CDS CCA 72 bp | CCGAAGGGGCTGCGGACGCGGCAAGTGTACCGGGCGTaGTCGCTGCGCACAGGGCGCACGATGAGCAGCTGG | + |
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Preference number: 6 (lower is better) Translates to: PKGLRTRQVYRA*SLRTGRTMSSW Trigger: CCAGCTGCTCATCGTGCGCCCTGTGCGCAGCGACCACGCCCGGTACACTTGCCGCGTCCGCAGCCCCTTCGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335624.5 |
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| CDS TCA 72 bp | GCGCACAGGGCGCACGATGAGCAGCTGGTCGCCCTCTaGGCGCATCCGGGGCGTCTCGGCTCCCTCCGATTC | + |
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Preference number: 6 (lower is better) Translates to: AHRAHDEQLVAL*AHPGRLGSLRF Trigger: GAATCGGAGGGAGCCGAGACGCCCCGGATGCGCTCAGAGGGCGACCAGCTGCTCATCGTGCGCCCTGTGCGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335624.5 |
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| CDS GCA 72 bp | CCGCCAGCAGCACAGAGGACACTGGCCCGGCGCGGATaGCTTCGGGGAGACCCTGGAACTGCAGGGAGGCAG | + |
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Preference number: 6 (lower is better) Translates to: PPAAQRTLARRG*LRGDPGTAGRQ Trigger: CTGCCTCCCTGCAGTTCCAGGGTCTCCCCGAAGGCATCCGCGCCGGGCCAGTGTCCTCTGTGCTGCTGGCGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000335624.5 ENST00000600663.1 |
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| CDS TCA 72 bp | TTCCGAGGTGGAAGGGGCACCACGGCTGACCGCTCCTaGGGCCCCAGGATGAGCAGGGAGACCCAGTCCCTG | + |
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Preference number: 6 (lower is better) Translates to: FRGGRGTTADRS*GPRMSRETQSL Trigger: CAGGGACTGGGTCTCCCTGCTCATCCTGGGGCCTCAGGAGCGGTCAGCCGTGGTGCCCCTTCCACCTCGGAA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000335624.5 ENST00000600663.1 |
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| CDS GCA 72 bp | GGGTGGGGGACAACCAGAGGCCTCCAGTGCCACCTCTaGCTCCCCCAACCGTGTCTCTGCCACCAGCGGATG | + |
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Preference number: 6 (lower is better) Translates to: GWGTTRGLQCHL*LPQPCLCHQRM Trigger: CATCCGCTGGTGGCAGAGACACGGTTGGGGGAGGCAGAGGTGGCACTGGAGGCCTCTGGTTGTCCCCCACCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000335624.5 ENST00000600663.1 |
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| CDS GCA 72 bp | GACCCCTGCCCGGATGACCTCAGCCGTGTAGACCCCTaGATCGTCCAGCTGGGCAGAGGCGAGCTCCAGAAC | + |
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Preference number: 6 (lower is better) Translates to: DPCPDDLSRVDP*IVQLGRGELQN Trigger: GTTCTGGAGCTCGCCTCTGCCCAGCTGGACGATGCAGGGGTCTACACGGCTGAGGTCATCCGGGCAGGGGTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335624.5 |
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| CDS CAA 90 bp | GTCCCAATCCAGGCTGAAGTTGCCGATGTGGAGTTTCCGCCCATCTaGACTGAGCCGCAGGCGACTCCCGCCTCCTGGAGCCAGGGGCCT | + |
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Preference number: 6 (lower is better) Translates to: VPIQAEVADVEFPPI*TEPQATPASWSQGP Trigger: AGGCCCCTGGCTCCAGGAGGCGGGAGTCGCCTGCGGCTCAGTCAAGATGGGCGGAAACTCCACATCGGCAACTTCAGCCTGGATTGGGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000335624.5 ENST00000600663.1 |
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| CDS TCA 72 bp | AGGCTGAAGTTGCCGATGTGGAGTTTCCGCCCATCTTaGCTGAGCCGCAGGCGACTCCCGCCTCCTGGAGCC | + |
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Preference number: 6 (lower is better) Translates to: RLKLPMWSFRPS*LSRRRLPPPGA Trigger: GGCTCCAGGAGGCGGGAGTCGCCTGCGGCTCAGTCAAGATGGGCGGAAACTCCACATCGGCAACTTCAGCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000335624.5 ENST00000600663.1 |
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| CDS GCA 72 bp | ACCCACCGTGAACTCGTGAGTCTGCTGGGAGACCCCTaGCCGGATGACCTCAGCCGTGTAGACCCCTGCATC | + |
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Preference number: 6 (lower is better) Translates to: THRELVSLLGDP*PDDLSRVDPCI Trigger: GATGCAGGGGTCTACACGGCTGAGGTCATCCGGGCAGGGGTCTCCCAGCAGACTCACGAGTTCACGGTGGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335624.5 |
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| CDS GCA 72 bp | CAGGGCCCCGCGCTCCACATCCCAAGTCAGCACGGCTaGATCTCTGGCTCTCTGAAGCCTCCACGAGGATAT | + |
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Preference number: 6 (lower is better) Translates to: QGPALHIPSQHG*ISGSLKPPRGY Trigger: ATATCCTCGTGGAGGCTTCAGAGAGCCAGAGATGCAGCCGTGCTGACTTGGGATGTGGAGCGCGGGGCCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000335624.5 ENST00000600663.1 |
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| CDS CCA 72 bp | CGCGCTCCACATCCCAAGTCAGCACGGCTGCATCTCTaGCTCTCTGAAGCCTCCACGAGGATATGGAGGGTC | + |
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Preference number: 6 (lower is better) Translates to: RAPHPKSARLHL*LSEASTRIWRV Trigger: GACCCTCCATATCCTCGTGGAGGCTTCAGAGAGCCAGAGATGCAGCCGTGCTGACTTGGGATGTGGAGCGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000335624.5 ENST00000600663.1 |
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| CDS CAA 90 bp | AGACCACTGGCTCTGATCACACCTGTGTGGCTGCGCGAACAGTCTTaGAGCCTCCGCCTACAGAGACAACTGAACTGGGGTCTGTGCTTG | + |
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Preference number: 6 (lower is better) Translates to: RPLALITPVWLREQS*SLRLQRQLNWGLCL Trigger: CAAGCACAGACCCCAGTTCAGTTGTCTCTGTAGGCGGAGGCTCAAAGACTGTTCGCGCAGCCACACAGGTGTGATCAGAGCCAGTGGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000335624.5 ENST00000600663.1 |
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| CDS TCA 72 bp | CCAGGAACTGATCTGGAACTTTCCAGCTGGGAGGTTTaGTGGAGGGAACTTCCACACCCAGCCCCTGGGAAG | + |
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Preference number: 6 (lower is better) Translates to: PGTDLELSSWEV*WRELPHPAPGK Trigger: CTTCCCAGGGGCTGGGTGTGGAAGTTCCCTCCATCAAACCTCCCAGCTGGAAAGTTCCAGATCAGTTCCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335624.5 |
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| CDS TCA 72 bp | ACATCCCAAGTCAGCACGGCTGCATCTCTGGCTCTCTaGAGCCTCCACGAGGATATGGAGGGTCCAATGAGG | + |
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Preference number: 6 (lower is better) Translates to: TSQVSTAASLAL*SLHEDMEGPMR Trigger: CCTCATTGGACCCTCCATATCCTCGTGGAGGCTTCAGAGAGCCAGAGATGCAGCCGTGCTGACTTGGGATGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000335624.5 ENST00000600663.1 |
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| CDS CAA 72 bp | GCTCTGATCACACCTGTGTGGCTGCGCGAACAGTCTTaGAGCCTCCGCCTACAGAGACAACTGAACTGGGGT | + |
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Preference number: 6 (lower is better) Translates to: ALITPVWLREQS*SLRLQRQLNWG Trigger: ACCCCAGTTCAGTTGTCTCTGTAGGCGGAGGCTCAAAGACTGTTCGCGCAGCCACACAGGTGTGATCAGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000335624.5 ENST00000600663.1 |
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| CDS CCA 72 bp | GGAGGTTTGATGGAGGGAACTTCCACACCCAGCCCCTaGGAAGAGCTCTTTGAGTCTGAAGAGAAGGCAGAG | + |
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Preference number: 6 (lower is better) Translates to: GGLMEGTSTPSP*EELFESEEKAE Trigger: CTCTGCCTTCTCTTCAGACTCAAAGAGCTCTTCCCAGGGGCTGGGTGTGGAAGTTCCCTCCATCAAACCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335624.5 |
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| CDS TCA 72 bp | ACAGCACGGAGTAATTTCCCAGGTCCCAATCCAGGCTaGAGTTGCCGATGTGGAGTTTCCGCCCATCTTGAC | + |
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Preference number: 6 (lower is better) Translates to: TARSNFPGPNPG*SCRCGVSAHLD Trigger: GTCAAGATGGGCGGAAACTCCACATCGGCAACTTCAGCCTGGATTGGGACCTGGGAAATTACTCCGTGCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000335624.5 ENST00000600663.1 |
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| CDS CAA 90 bp | AGAAGGGGGAAACCGGGCTCAAATCTTGGCCCTCAGCAGAAACATTaGACCAGAAGGACCCAGACATGTTGGAACTCAGGGCCTCAGGAA | + |
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Preference number: 6 (lower is better) Translates to: RRGKPGSNLGPQQKH*TRRTQTCWNSGPQE Trigger: TTCCTGAGGCCCTGAGTTCCAACATGTCTGGGTCCTTCTGGTCAAATGTTTCTGCTGAGGGCCAAGATTTGAGCCCGGTTTCCCCCTTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000335624.5 |
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| CDS TCA 72 bp | GTGGTCCTCCAGAGGGACTTTGAGGTCCAGAGGCCATaGAATCTCCACTGGGGTCACACTATGCATCTTCTT | + |
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Preference number: 6 (lower is better) Translates to: VVLQRDFEVQRP*NLHWGHTMHLL Trigger: AAGAAGATGCATAGTGTGACCCCAGTGGAGATTTCATGGCCTCTGGACCTCAAAGTCCCTCTGGAGGACCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000335624.5 ENST00000600663.1 |
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| CDS CAA 90 bp | TCTTGGCCCTCAGCAGAAACATTTGACCAGAAGGACCCAGACATGTaGGAACTCAGGGCCTCAGGAAACCAGCTGGAATCAGAGATTCCA | + |
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Preference number: 6 (lower is better) Translates to: SWPSAETFDQKDPDM*ELRASGNQLESEIP Trigger: TGGAATCTCTGATTCCAGCTGGTTTCCTGAGGCCCTGAGTTCCAACATGTCTGGGTCCTTCTGGTCAAATGTTTCTGCTGAGGGCCAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000335624.5 |
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| CDS CCA 72 bp | CAGCAGAAACATTTGACCAGAAGGACCCAGACATGTTaGAACTCAGGGCCTCAGGAAACCAGCTGGAATCAG | + |
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Preference number: 6 (lower is better) Translates to: QQKHLTRRTQTC*NSGPQETSWNQ Trigger: CTGATTCCAGCTGGTTTCCTGAGGCCCTGAGTTCCAACATGTCTGGGTCCTTCTGGTCAAATGTTTCTGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000335624.5 |
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| CDS CCA 72 bp | GAGTGGGTCTCTGCAGAAAATTTGGATTCAGGGCTCTaGGCAGAGAGTTTAAGATCCATATCATCCGGGGAG | + |
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Preference number: 6 (lower is better) Translates to: EWVSAENLDSGL*AESLRSISSGE Trigger: CTCCCCGGATGATATGGATCTTAAACTCTCTGCCCAGAGCCCTGAATCCAAATTTTCTGCAGAGACCCACTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335624.5 |
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| CDS CAA 72 bp | TCAGCAGAAACATTTGACCAGAAGGACCCAGACATGTaGGAACTCAGGGCCTCAGGAAACCAGCTGGAATCA | + |
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Preference number: 6 (lower is better) Translates to: SAETFDQKDPDM*ELRASGNQLES Trigger: TGATTCCAGCTGGTTTCCTGAGGCCCTGAGTTCCAACATGTCTGGGTCCTTCTGGTCAAATGTTTCTGCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000335624.5 |
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| CDS CAA 72 bp | GGAAAGCTTGCAGCTGAGTGGGTCTCTGCAGAAAATTaGGATTCAGGGCTCTGGGCAGAGAGTTTAAGATCC | + |
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Preference number: 6 (lower is better) Translates to: GKLAAEWVSAEN*DSGLWAESLRS Trigger: GGATCTTAAACTCTCTGCCCAGAGCCCTGAATCCAAATTTTCTGCAGAGACCCACTCAGCTGCAAGCTTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335624.5 |
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| CDS TCA 72 bp | AAACCAGCTGGAATCAGAGATTCCAGCAGAGGCTTTTaGATCCAGGAACTGATCTGGAACTTTCCAGCTGGG | + |
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Preference number: 6 (lower is better) Translates to: KPAGIRDSSRGF*IQELIWNFPAG Trigger: CCCAGCTGGAAAGTTCCAGATCAGTTCCTGGATTCAAAAGCCTCTGCTGGAATCTCTGATTCCAGCTGGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335624.5 |
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| CDS TCA 72 bp | CAATTAGAAACCCAGCTGAAAAAGCAAGACTTACGCTaGAGACAGCAGCAGCAAGCCCAACTCTTCACTGGC | + |
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Preference number: 6 (lower is better) Translates to: QLETQLKKQDLR*RQQQQAQLFTG Trigger: GCCAGTGAAGAGTTGGGCTTGCTGCTGCTGTCTTCAGCGTAAGTCTTGCTTTTTCAGCTGGGTTTCTAATTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000335624.5 ENST00000600663.1 |
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| CDS CAA 72 bp | GAAACCAGCTGGAATCAGAGATTCCAGCAGAGGCTTTaGAATCCAGGAACTGATCTGGAACTTTCCAGCTGG | + |
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Preference number: 6 (lower is better) Translates to: ETSWNQRFQQRL*NPGTDLELSSW Trigger: CCAGCTGGAAAGTTCCAGATCAGTTCCTGGATTCAAAAGCCTCTGCTGGAATCTCTGATTCCAGCTGGTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000335624.5 |
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| CDS TCA 72 bp | TCTGGGGCCTCAACAGACAGTTTGGTATGGGAGACTTaGGTAGAAATGTTTGAAGCTGGGGTCTTAACAGTG | + |
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Preference number: 6 (lower is better) Translates to: SGASTDSLVWET*VEMFEAGVLTV Trigger: CACTGTTAAGACCCCAGCTTCAAACATTTCTACTCAAGTCTCCCATACCAAACTGTCTGTTGAGGCCCCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335624.5 |
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| CDS TCA 72 bp | ACAGTGAAGGAAGGCTTGGGGTCTTTGGCAGGAACTTaGGGATCCGAAATATCAGGAAATACTTCAGAACCA | + |
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Preference number: 6 (lower is better) Translates to: TVKEGLGSLAGT*GSEISGNTSEP Trigger: TGGTTCTGAAGTATTTCCTGATATTTCGGATCCTCAAGTTCCTGCCAAAGACCCCAAGCCTTCCTTCACTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335624.5 |
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| CDS CAA 72 bp | AACAGTGAAGGAAGGCTTGGGGTCTTTGGCAGGAACTaGAGGATCCGAAATATCAGGAAATACTTCAGAACC | + |
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Preference number: 6 (lower is better) Translates to: NSEGRLGVFGRN*RIRNIRKYFRT Trigger: GGTTCTGAAGTATTTCCTGATATTTCGGATCCTCAAGTTCCTGCCAAAGACCCCAAGCCTTCCTTCACTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335624.5 |
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