RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for VSIG1 (Homo sapiens)

Ensembl gene IDs: ENSG00000101842

Ensembl transcript IDs: ENST00000217957.10, ENST00000415430.7, ENST00000458383.1, ENST00000479635.1, ENST00000485533.1

Found 211 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR GCA 90 bp ATCTTAAGAGTTCACTTAGAACACTTTTCTGGACTGCCTTTCAAAGTAGATAACCCAGGGAGCGGAGGTTaGAGTGAGCCGAGATCGCAC +
Preference number: 2 (lower is better)
Translates to: ILRVHLEHFSGLPFKVDNPGSGG*SEPRSH
Trigger: GTGCGATCTCGGCTCACTGCAACCTCCGCTCCCTGG...GTTATCTACTTTGAAAGGCAGTCCAGAAAAGTGTTCTAAGTGAACTCTTAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
3UTR-3UTR TCA 90 bp AATTTGCCATGCTCAGATATTGGATACCAGGGTGATTTCTTGGGAAATCTAATAAAGGTGGGCGGATCATaGGGTCAGGAGATGGAGACC +
Preference number: 2 (lower is better)
Translates to: NLPCSDIGYQGDFLGNLIKVGGS*GQEMET
Trigger: GGTCTCCATCTCCTGACCTCATGATCCGCCCACCTT...TATTAGATTTCCCAAGAAATCACCCTGGTATCCAATATCTGAGCATGGCAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
3UTR-3UTR GCA 90 bp AATTTGCCATGCTCAGATATTGGATACCAGGGTGATTTCTTGGGAAATCTAATAACTACGATCACAGCCTaGGCGACGGAGCAAGACTCT +
Preference number: 2 (lower is better)
Translates to: NLPCSDIGYQGDFLGNLITTITA*ATEQDS
Trigger: AGAGTCTTGCTCCGTCGCGCAGGCTGTGATCGTAGT...TATTAGATTTCCCAAGAAATCACCCTGGTATCCAATATCTGAGCATGGCAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
3UTR-3UTR GCA 90 bp ATCTTAAGAGTTCACTTAGAACACTTTTCTGGACTGCCTTTCAAAGTAGATAACACTACGATCACAGCCTaGGCGACGGAGCAAGACTCT +
Preference number: 2 (lower is better)
Translates to: ILRVHLEHFSGLPFKVDNTTITA*ATEQDS
Trigger: AGAGTCTTGCTCCGTCGCGCAGGCTGTGATCGTAGT...GTTATCTACTTTGAAAGGCAGTCCAGAAAAGTGTTCTAAGTGAACTCTTAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
3UTR-3UTR CCA 90 bp GGAACCCTTGCTGATTTAGCTGTTATCTTGGCGTGTTTATTCTGGATTCATAGTGGAGGAGGTGGAGGTTaGTTAGGTTATTTGAATTCC +
Preference number: 2 (lower is better)
Translates to: GTLADLAVILACLFWIHSGGGGG*LGYLNS
Trigger: GGAATTCAAATAACCTAACCAACCTCCACCTCCTCC...ACTATGAATCCAGAATAAACACGCCAAGATAACAGCTAAATCAGCAAGGGTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
3UTR-3UTR TCA 90 bp AATTTGCCATGCTCAGATATTGGATACCAGGGTGATTTCTTGGGAAATCTAATATACAGGAACCCTTGCTaGTTTAGCTGTTATCTTGGC +
Preference number: 2 (lower is better)
Translates to: NLPCSDIGYQGDFLGNLIYRNPC*FSCYLG
Trigger: GCCAAGATAACAGCTAAATCAGCAAGGGTTCCTGTA...TATTAGATTTCCCAAGAAATCACCCTGGTATCCAATATCTGAGCATGGCAAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
3UTR-3UTR TCA 90 bp ATCTTAAGAGTTCACTTAGAACACTTTTCTGGACTGCCTTTCAAAGTAGATAACTCCTGGCTAACAACGTaGAACCCCATCTCTACTAAA +
Preference number: 2 (lower is better)
Translates to: ILRVHLEHFSGLPFKVDNSWLTT*NPISTK
Trigger: TTTAGTAGAGATGGGGTTTCACGTTGTTAGCCAGGA...GTTATCTACTTTGAAAGGCAGTCCAGAAAAGTGTTCTAAGTGAACTCTTAAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
3UTR-3UTR CCA 90 bp ATCTTAAGAGTTCACTTAGAACACTTTTCTGGACTGCCTTTCAAAGTAGATAACGGAGGAGGTGGAGGTTaGTTAGGTTATTTGAATTCC +
Preference number: 2 (lower is better)
Translates to: ILRVHLEHFSGLPFKVDNGGGGG*LGYLNS
Trigger: GGAATTCAAATAACCTAACCAACCTCCACCTCCTCC...GTTATCTACTTTGAAAGGCAGTCCAGAAAAGTGTTCTAAGTGAACTCTTAAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
3UTR CAA 90 bp TTCTATATTGGTAATACAGGAACCCTTGCTGATTTAGCTGTTATCTaGGCGTGTTTATTCTGGATTCATAGTAGGAATGAGCACCTTGTT +
Preference number: 2 (lower is better)
Translates to: FYIGNTGTLADLAVI*ACLFWIHSRNEHLV
Trigger: AACAAGGTGCTCATTCCTACTATGAATCCAGAATAAACACGCCAAGATAACAGCTAAATCAGCAAGGGTTCCTGTATTACCAATATAGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
3UTR-3UTR GCA 90 bp AATTTGCCATGCTCAGATATTGGATACCAGGGTGATTTCTTGGGAAATCTAATACCACCTTGTCATATGTaGATGTGGAACATAAGAGTA +
Preference number: 2 (lower is better)
Translates to: NLPCSDIGYQGDFLGNLIPPCHM*MWNIRV
Trigger: TACTCTTATGTTCCACATGCACATATGACAAGGTGG...TATTAGATTTCCCAAGAAATCACCCTGGTATCCAATATCTGAGCATGGCAAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
3UTR-3UTR CCA 90 bp AATTTGCCATGCTCAGATATTGGATACCAGGGTGATTTCTTGGGAAATCTAATATTGGCGTGTTTATTCTaGATTCATAGTAGGAATGAG +
Preference number: 2 (lower is better)
Translates to: NLPCSDIGYQGDFLGNLILACLF*IHSRNE
Trigger: CTCATTCCTACTATGAATCCAGAATAAACACGCCAA...TATTAGATTTCCCAAGAAATCACCCTGGTATCCAATATCTGAGCATGGCAAATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
3UTR-3UTR TCA 90 bp ATCTTAAGAGTTCACTTAGAACACTTTTCTGGACTGCCTTTCAAAGTAGATAACTGCCTGTACATTATTTaGCAAAGTTGTGGGGATTTT +
Preference number: 2 (lower is better)
Translates to: ILRVHLEHFSGLPFKVDNCLYII*QSCGDF
Trigger: AAAATCCCCACAACTTTGTCAAATAATGTACAGGCA...GTTATCTACTTTGAAAGGCAGTCCAGAAAAGTGTTCTAAGTGAACTCTTAAGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
3UTR-3UTR CCA 90 bp ATCTTAAGAGTTCACTTAGAACACTTTTCTGGACTGCCTTTCAAAGTAGATAACTTGGCGTGTTTATTCTaGATTCATAGTAGGAATGAG +
Preference number: 2 (lower is better)
Translates to: ILRVHLEHFSGLPFKVDNLACLF*IHSRNE
Trigger: CTCATTCCTACTATGAATCCAGAATAAACACGCCAA...GTTATCTACTTTGAAAGGCAGTCCAGAAAAGTGTTCTAAGTGAACTCTTAAGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
3UTR-3UTR CCA 90 bp ATCTTAAGAGTTCACTTAGAACACTTTTCTGGACTGCCTTTCAAAGTAGATAACTGTCATATGTGCATGTaGAACATAAGAGTAGCTAAA +
Preference number: 2 (lower is better)
Translates to: ILRVHLEHFSGLPFKVDNCHMCM*NIRVAK
Trigger: TTTAGCTACTCTTATGTTCCACATGCACATATGACA...GTTATCTACTTTGAAAGGCAGTCCAGAAAAGTGTTCTAAGTGAACTCTTAAGAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
3UTR-3UTR CAA 90 bp AATTTGCCATGCTCAGATATTGGATACCAGGGTGATTTCTTGGGAAATCTAATAAGGCAGGAGAATCGCTaGAACCCAGGGAGCGGAGGT +
Preference number: 3 (lower is better)
Translates to: NLPCSDIGYQGDFLGNLIRQENR*NPGSGG
Trigger: ACCTCCGCTCCCTGGGTTCAAGCGATTCTCCTGCCT...TATTAGATTTCCCAAGAAATCACCCTGGTATCCAATATCTGAGCATGGCAAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
3UTR-3UTR CAA 90 bp GGAACCCTTGCTGATTTAGCTGTTATCTTGGCGTGTTTATTCTGGATTCATAGTCTTGTTAGAAGAAGGTaGGTCAAAATGGAAGGAGGA +
Preference number: 3 (lower is better)
Translates to: GTLADLAVILACLFWIHSLVRRR*VKMEGG
Trigger: TCCTCCTTCCATTTTGACCAACCTTCTTCTAACAAG...ACTATGAATCCAGAATAAACACGCCAAGATAACAGCTAAATCAGCAAGGGTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
3UTR TCA 72 bp AGTCTACCTGTAAGTTTCTTCAAGGTGAGATGTGGGTaGAATATGATCATGAGAAAGCTTTTCAACAGGGGA +
Preference number: 3 (lower is better)
Translates to: SLPVSFFKVRCG*NMIMRKLFNRG
Trigger: TCCCCTGTTGAAAAGCTTTCTCATGATCATATTTCACCCACATCTCACCTTGAAGAAACTTACAGGTAGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
3UTR-3UTR CAA 90 bp AATTTGCCATGCTCAGATATTGGATACCAGGGTGATTTCTTGGGAAATCTAATACTTGTTAGAAGAAGGTaGGTCAAAATGGAAGGAGGA +
Preference number: 3 (lower is better)
Translates to: NLPCSDIGYQGDFLGNLILVRRR*VKMEGG
Trigger: TCCTCCTTCCATTTTGACCAACCTTCTTCTAACAAG...TATTAGATTTCCCAAGAAATCACCCTGGTATCCAATATCTGAGCATGGCAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
3UTR-3UTR CAA 90 bp ATCTTAAGAGTTCACTTAGAACACTTTTCTGGACTGCCTTTCAAAGTAGATAACTGCCATGCTCAGATATaGGATACCAGGGTGATTTCT +
Preference number: 3 (lower is better)
Translates to: ILRVHLEHFSGLPFKVDNCHAQI*DTRVIS
Trigger: AGAAATCACCCTGGTATCCAATATCTGAGCATGGCA...GTTATCTACTTTGAAAGGCAGTCCAGAAAAGTGTTCTAAGTGAACTCTTAAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
3UTR-3UTR CAA 90 bp ATCTTAAGAGTTCACTTAGAACACTTTTCTGGACTGCCTTTCAAAGTAGATAACCACTTGCCCTGTCATTaGTTATGCTTACGTGTTAGT +
Preference number: 3 (lower is better)
Translates to: ILRVHLEHFSGLPFKVDNHLPCH*LCLRVS
Trigger: ACTAACACGTAAGCATAACAAATGACAGGGCAAGTG...GTTATCTACTTTGAAAGGCAGTCCAGAAAAGTGTTCTAAGTGAACTCTTAAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
3UTR-3UTR CAA 90 bp AATTTGCCATGCTCAGATATTGGATACCAGGGTGATTTCTTGGGAAATCTAATACTAATTAATGCCACCTaGTCATATGTGCATGTGGAA +
Preference number: 3 (lower is better)
Translates to: NLPCSDIGYQGDFLGNLILINAT*SYVHVE
Trigger: TTCCACATGCACATATGACAAGGTGGCATTAATTAG...TATTAGATTTCCCAAGAAATCACCCTGGTATCCAATATCTGAGCATGGCAAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
3UTR-3UTR CAA 90 bp AATTTGCCATGCTCAGATATTGGATACCAGGGTGATTTCTTGGGAAATCTAATAGATTTAGCTGTTATCTaGGCGTGTTTATTCTGGATT +
Preference number: 3 (lower is better)
Translates to: NLPCSDIGYQGDFLGNLIDLAVI*ACLFWI
Trigger: AATCCAGAATAAACACGCCAAGATAACAGCTAAATC...TATTAGATTTCCCAAGAAATCACCCTGGTATCCAATATCTGAGCATGGCAAATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
3UTR-3UTR CAA 90 bp AATTTGCCATGCTCAGATATTGGATACCAGGGTGATTTCTTGGGAAATCTAATAACAACACAGGTACTGTaGCAAAACTCAACTAAGTTA +
Preference number: 3 (lower is better)
Translates to: NLPCSDIGYQGDFLGNLITTQVL*QNSTKL
Trigger: TAACTTAGTTGAGTTTTGCAACAGTACCTGTGTTGT...TATTAGATTTCCCAAGAAATCACCCTGGTATCCAATATCTGAGCATGGCAAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
3UTR-3UTR CAA 90 bp ATCTTAAGAGTTCACTTAGAACACTTTTCTGGACTGCCTTTCAAAGTAGATAACGATTTAGCTGTTATCTaGGCGTGTTTATTCTGGATT +
Preference number: 3 (lower is better)
Translates to: ILRVHLEHFSGLPFKVDNDLAVI*ACLFWI
Trigger: AATCCAGAATAAACACGCCAAGATAACAGCTAAATC...GTTATCTACTTTGAAAGGCAGTCCAGAAAAGTGTTCTAAGTGAACTCTTAAGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR GCA 90 bp GCTGATTTAGCTGTTATCTTGGCGTGTTTATTCTGGATTCATAGTAGGAATGAGCCAGGGAGCGGAGGTTaGAGTGAGCCGAGATCGCAC +
Preference number: 4 (lower is better)
Translates to: ADLAVILACLFWIHSRNEPGSGG*SEPRSH
Trigger: GTGCGATCTCGGCTCACTGCAACCTCCGCTCCCTGG...CTCATTCCTACTATGAATCCAGAATAAACACGCCAAGATAACAGCTAAATCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR CCA 90 bp AATTTGCCATGCTCAGATATTGGATACCAGGGTGATTTCTTGGGAAATCTAATATCCTGGGGCAGGCTCTaGGGCAGGCTCCTGAGTAGG +
Preference number: 4 (lower is better)
Translates to: NLPCSDIGYQGDFLGNLISWGRL*GRLLSR
Trigger: CCTACTCAGGAGCCTGCCCCAGAGCCTGCCCCAGGA...TATTAGATTTCCCAAGAAATCACCCTGGTATCCAATATCTGAGCATGGCAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR TCA 90 bp AATTTGCCATGCTCAGATATTGGATACCAGGGTGATTTCTTGGGAAATCTAATACACTGCCATAGGCTCTaGTCCTGGGGCAGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: NLPCSDIGYQGDFLGNLIHCHRL*SWGRLW
Trigger: CCAGAGCCTGCCCCAGGATCAGAGCCTATGGCAGTG...TATTAGATTTCCCAAGAAATCACCCTGGTATCCAATATCTGAGCATGGCAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR CCA 90 bp ATCTTAAGAGTTCACTTAGAACACTTTTCTGGACTGCCTTTCAAAGTAGATAACTCCTGGGGCAGGCTCTaGGGCAGGCTCCTGAGTAGG +
Preference number: 4 (lower is better)
Translates to: ILRVHLEHFSGLPFKVDNSWGRL*GRLLSR
Trigger: CCTACTCAGGAGCCTGCCCCAGAGCCTGCCCCAGGA...GTTATCTACTTTGAAAGGCAGTCCAGAAAAGTGTTCTAAGTGAACTCTTAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR TCA 90 bp GCTGATTTAGCTGTTATCTTGGCGTGTTTATTCTGGATTCATAGTAGGAATGAGAAGGTGGGCGGATCATaGGGTCAGGAGATGGAGACC +
Preference number: 4 (lower is better)
Translates to: ADLAVILACLFWIHSRNEKVGGS*GQEMET
Trigger: GGTCTCCATCTCCTGACCTCATGATCCGCCCACCTT...CTCATTCCTACTATGAATCCAGAATAAACACGCCAAGATAACAGCTAAATCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR TCA 90 bp GGAACCCTTGCTGATTTAGCTGTTATCTTGGCGTGTTTATTCTGGATTCATAGTCTGAGGCACGAGCTGTaGGAAATTGGCTCCATCTCC +
Preference number: 4 (lower is better)
Translates to: GTLADLAVILACLFWIHSLRHEL*EIGSIS
Trigger: GGAGATGGAGCCAATTTCTCACAGCTCGTGCCTCAG...ACTATGAATCCAGAATAAACACGCCAAGATAACAGCTAAATCAGCAAGGGTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415430.7
CDS-3UTR CCA 90 bp GCTGATTTAGCTGTTATCTTGGCGTGTTTATTCTGGATTCATAGTAGGAATGAGCTCTGGCTCTGGCTCTaGCTCTGGCTCCAATTCCGA +
Preference number: 4 (lower is better)
Translates to: ADLAVILACLFWIHSRNELWLWL*LWLQFR
Trigger: TCGGAATTGGAGCCAGAGCCAGAGCCAGAGCCAGAG...CTCATTCCTACTATGAATCCAGAATAAACACGCCAAGATAACAGCTAAATCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR CCA 90 bp GGAACCCTTGCTGATTTAGCTGTTATCTTGGCGTGTTTATTCTGGATTCATAGTACACCGAGGTTTGCCTaGCTTATCTGCTGGGCATCG +
Preference number: 4 (lower is better)
Translates to: GTLADLAVILACLFWIHSTPRFA*LICWAS
Trigger: CGATGCCCAGCAGATAAGCCAGGCAAACCTCGGTGT...ACTATGAATCCAGAATAAACACGCCAAGATAACAGCTAAATCAGCAAGGGTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415430.7
CDS-3UTR GCA 90 bp GCTGATTTAGCTGTTATCTTGGCGTGTTTATTCTGGATTCATAGTAGGAATGAGACTACGATCACAGCCTaGGCGACGGAGCAAGACTCT +
Preference number: 4 (lower is better)
Translates to: ADLAVILACLFWIHSRNETTITA*ATEQDS
Trigger: AGAGTCTTGCTCCGTCGCGCAGGCTGTGATCGTAGT...CTCATTCCTACTATGAATCCAGAATAAACACGCCAAGATAACAGCTAAATCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR CCA 90 bp GCTGATTTAGCTGTTATCTTGGCGTGTTTATTCTGGATTCATAGTAGGAATGAGTTCCGACTGCGTTTCTaGCTCCAGCTCCAGCTCGAT +
Preference number: 4 (lower is better)
Translates to: ADLAVILACLFWIHSRNEFRLRF*LQLQLD
Trigger: ATCGAGCTGGAGCTGGAGCCAGAAACGCAGTCGGAA...CTCATTCCTACTATGAATCCAGAATAAACACGCCAAGATAACAGCTAAATCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR CCA 90 bp AATTTGCCATGCTCAGATATTGGATACCAGGGTGATTTCTTGGGAAATCTAATACTCTGGCTCTGGCTCTaGCTCCAATTCCGACTGCGT +
Preference number: 4 (lower is better)
Translates to: NLPCSDIGYQGDFLGNLILWLWL*LQFRLR
Trigger: ACGCAGTCGGAATTGGAGCCAGAGCCAGAGCCAGAG...TATTAGATTTCCCAAGAAATCACCCTGGTATCCAATATCTGAGCATGGCAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR CCA 90 bp AATTTGCCATGCTCAGATATTGGATACCAGGGTGATTTCTTGGGAAATCTAATACTCTGGCTCTGGCTCTaGCTCTGGCTCCAATTCCGA +
Preference number: 4 (lower is better)
Translates to: NLPCSDIGYQGDFLGNLILWLWL*LWLQFR
Trigger: TCGGAATTGGAGCCAGAGCCAGAGCCAGAGCCAGAG...TATTAGATTTCCCAAGAAATCACCCTGGTATCCAATATCTGAGCATGGCAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR CCA 90 bp GGAACCCTTGCTGATTTAGCTGTTATCTTGGCGTGTTTATTCTGGATTCATAGTGCCTGGCTTATCTGCTaGGCATCGCCAAGCAAACAT +
Preference number: 4 (lower is better)
Translates to: GTLADLAVILACLFWIHSAWLIC*ASPSKH
Trigger: ATGTTTGCTTGGCGATGCCCAGCAGATAAGCCAGGC...ACTATGAATCCAGAATAAACACGCCAAGATAACAGCTAAATCAGCAAGGGTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415430.7
CDS-3UTR TCA 90 bp GCTGATTTAGCTGTTATCTTGGCGTGTTTATTCTGGATTCATAGTAGGAATGAGTGTGTGGAGGTTAGTTaGGAGCAGCAGGTGCCAGTA +
Preference number: 4 (lower is better)
Translates to: ADLAVILACLFWIHSRNECVEVS*EQQVPV
Trigger: TACTGGCACCTGCTGCTCTCAACTAACCTCCACACA...CTCATTCCTACTATGAATCCAGAATAAACACGCCAAGATAACAGCTAAATCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR TCA 90 bp GGAACCCTTGCTGATTTAGCTGTTATCTTGGCGTGTTTATTCTGGATTCATAGTTCCCGGTGGTTGGGTTaGAGTTTTCTTTCACTGGCA +
Preference number: 4 (lower is better)
Translates to: GTLADLAVILACLFWIHSSRWLG*SFLSLA
Trigger: TGCCAGTGAAAGAAAACTTCAACCCAACCACCGGGA...ACTATGAATCCAGAATAAACACGCCAAGATAACAGCTAAATCAGCAAGGGTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR TCA 90 bp ATCTTAAGAGTTCACTTAGAACACTTTTCTGGACTGCCTTTCAAAGTAGATAACAAGGTGGGCGGATCATaGGGTCAGGAGATGGAGACC +
Preference number: 4 (lower is better)
Translates to: ILRVHLEHFSGLPFKVDNKVGGS*GQEMET
Trigger: GGTCTCCATCTCCTGACCTCATGATCCGCCCACCTT...GTTATCTACTTTGAAAGGCAGTCCAGAAAAGTGTTCTAAGTGAACTCTTAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR GCA 90 bp GGAACCCTTGCTGATTTAGCTGTTATCTTGGCGTGTTTATTCTGGATTCATAGTGTCTTCTCTTGGCATTaGTTCGCTTTCTCCCCTTGG +
Preference number: 4 (lower is better)
Translates to: GTLADLAVILACLFWIHSVFSWH*FAFSPW
Trigger: CCAAGGGGAGAAAGCGAAGCAATGCCAAGAGAAGAC...ACTATGAATCCAGAATAAACACGCCAAGATAACAGCTAAATCAGCAAGGGTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR GCA 90 bp ATCTTAAGAGTTCACTTAGAACACTTTTCTGGACTGCCTTTCAAAGTAGATAACGGCTCCAATTCCGACTaGGTTTCTGGCTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: ILRVHLEHFSGLPFKVDNGSNSD*VSGSSS
Trigger: GGAGCTGGAGCCAGAAACGCAGTCGGAATTGGAGCC...GTTATCTACTTTGAAAGGCAGTCCAGAAAAGTGTTCTAAGTGAACTCTTAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR CCA 90 bp GCTGATTTAGCTGTTATCTTGGCGTGTTTATTCTGGATTCATAGTAGGAATGAGGTTCACGAAACCGTCTaGGATGGTCACTTGCACCAC +
Preference number: 4 (lower is better)
Translates to: ADLAVILACLFWIHSRNEVHETV*DGHLHH
Trigger: GTGGTGCAAGTGACCATCCCAGACGGTTTCGTGAAC...CTCATTCCTACTATGAATCCAGAATAAACACGCCAAGATAACAGCTAAATCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR CCA 90 bp GGAACCCTTGCTGATTTAGCTGTTATCTTGGCGTGTTTATTCTGGATTCATAGTTTGGCCGAGAAAGTCTaGGGGGTTGTTAACATCGCA +
Preference number: 4 (lower is better)
Translates to: GTLADLAVILACLFWIHSLAEKV*GVVNIA
Trigger: TGCGATGTTAACAACCCCCCAGACTTTCTCGGCCAA...ACTATGAATCCAGAATAAACACGCCAAGATAACAGCTAAATCAGCAAGGGTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR CCA 90 bp ATCTTAAGAGTTCACTTAGAACACTTTTCTGGACTGCCTTTCAAAGTAGATAACCTCTGGCTCTGGCTCTaGCTCCAATTCCGACTGCGT +
Preference number: 4 (lower is better)
Translates to: ILRVHLEHFSGLPFKVDNLWLWL*LQFRLR
Trigger: ACGCAGTCGGAATTGGAGCCAGAGCCAGAGCCAGAG...GTTATCTACTTTGAAAGGCAGTCCAGAAAAGTGTTCTAAGTGAACTCTTAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR TCA 90 bp AATTTGCCATGCTCAGATATTGGATACCAGGGTGATTTCTTGGGAAATCTAATATGTGTGGAGGTTAGTTaGGAGCAGCAGGTGCCAGTA +
Preference number: 4 (lower is better)
Translates to: NLPCSDIGYQGDFLGNLICVEVS*EQQVPV
Trigger: TACTGGCACCTGCTGCTCTCAACTAACCTCCACACA...TATTAGATTTCCCAAGAAATCACCCTGGTATCCAATATCTGAGCATGGCAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR TCA 90 bp GGAACCCTTGCTGATTTAGCTGTTATCTTGGCGTGTTTATTCTGGATTCATAGTCTGGATGTGAAGAAGTaGGATCGATTTCGCAGGAAC +
Preference number: 4 (lower is better)
Translates to: GTLADLAVILACLFWIHSLDVKK*DRFRRN
Trigger: GTTCCTGCGAAATCGATCTCACTTCTTCACATCCAG...ACTATGAATCCAGAATAAACACGCCAAGATAACAGCTAAATCAGCAAGGGTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR TCA 90 bp GGAACCCTTGCTGATTTAGCTGTTATCTTGGCGTGTTTATTCTGGATTCATAGTTCAAGGCCCCAACAATaGTTCCAACTTCTGGATGTG +
Preference number: 4 (lower is better)
Translates to: GTLADLAVILACLFWIHSSRPQQ*FQLLDV
Trigger: CACATCCAGAAGTTGGAATCATTGTTGGGGCCTTGA...ACTATGAATCCAGAATAAACACGCCAAGATAACAGCTAAATCAGCAAGGGTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR TCA 90 bp AATTTGCCATGCTCAGATATTGGATACCAGGGTGATTTCTTGGGAAATCTAATACCATACCCTCAGTACTaGGGCACGAGCTGTGAGAAA +
Preference number: 4 (lower is better)
Translates to: NLPCSDIGYQGDFLGNLIPYPQY*GTSCEK
Trigger: TTTCTCACAGCTCGTGCCTCAGTACTGAGGGTATGG...TATTAGATTTCCCAAGAAATCACCCTGGTATCCAATATCTGAGCATGGCAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415430.7
CDS-3UTR GCA 90 bp GCTGATTTAGCTGTTATCTTGGCGTGTTTATTCTGGATTCATAGTAGGAATGAGTTTGCCTGGCTTATCTaGTGGGCATCGCCAAGCAAA +
Preference number: 4 (lower is better)
Translates to: ADLAVILACLFWIHSRNEFAWLI*WASPSK
Trigger: TTTGCTTGGCGATGCCCAGCAGATAAGCCAGGCAAA...CTCATTCCTACTATGAATCCAGAATAAACACGCCAAGATAACAGCTAAATCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415430.7
CDS-3UTR GCA 90 bp ATCTTAAGAGTTCACTTAGAACACTTTTCTGGACTGCCTTTCAAAGTAGATAACGATCACACCGAGGTTTaGCTGGCTTATCTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: ILRVHLEHFSGLPFKVDNDHTEV*LAYLLG
Trigger: GCCCAGCAGATAAGCCAGGCAAACCTCGGTGTGATC...GTTATCTACTTTGAAAGGCAGTCCAGAAAAGTGTTCTAAGTGAACTCTTAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415430.7
CDS-3UTR CCA 90 bp GCTGATTTAGCTGTTATCTTGGCGTGTTTATTCTGGATTCATAGTAGGAATGAGAGAAAGACCACTGGATaGAAAGCTGTTCTCGGGAGG +
Preference number: 4 (lower is better)
Translates to: ADLAVILACLFWIHSRNERKTTG*KAVLGR
Trigger: CCTCCCGAGAACAGCTTTCCATCCAGTGGTCTTTCT...CTCATTCCTACTATGAATCCAGAATAAACACGCCAAGATAACAGCTAAATCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR CCA 90 bp GCTGATTTAGCTGTTATCTTGGCGTGTTTATTCTGGATTCATAGTAGGAATGAGTTGGCCGAGAAAGTCTaGGGGGTTGTTAACATCGCA +
Preference number: 4 (lower is better)
Translates to: ADLAVILACLFWIHSRNELAEKV*GVVNIA
Trigger: TGCGATGTTAACAACCCCCCAGACTTTCTCGGCCAA...CTCATTCCTACTATGAATCCAGAATAAACACGCCAAGATAACAGCTAAATCAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR CCA 90 bp GCTGATTTAGCTGTTATCTTGGCGTGTTTATTCTGGATTCATAGTAGGAATGAGGGTAGCGTCTTCTCTTaGCATTGCTTCGCTTTCTCC +
Preference number: 4 (lower is better)
Translates to: ADLAVILACLFWIHSRNEGSVFS*HCFAFS
Trigger: GGAGAAAGCGAAGCAATGCCAAGAGAAGACGCTACC...CTCATTCCTACTATGAATCCAGAATAAACACGCCAAGATAACAGCTAAATCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR CCA 90 bp GGAACCCTTGCTGATTTAGCTGTTATCTTGGCGTGTTTATTCTGGATTCATAGTAGTCTGGTTCTTGGATaGTATCAGGGCCAGTCTCAT +
Preference number: 4 (lower is better)
Translates to: GTLADLAVILACLFWIHSSLVLG*YQGQSH
Trigger: ATGAGACTGGCCCTGATACCATCCAAGAACCAGACT...ACTATGAATCCAGAATAAACACGCCAAGATAACAGCTAAATCAGCAAGGGTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR CCA 90 bp GGAACCCTTGCTGATTTAGCTGTTATCTTGGCGTGTTTATTCTGGATTCATAGTCTCCTGAGTAGGCTTTaGCTCATAGTCTGGTTCTTG +
Preference number: 4 (lower is better)
Translates to: GTLADLAVILACLFWIHSLLSRL*LIVWFL
Trigger: CAAGAACCAGACTATGAGCCAAAGCCTACTCAGGAG...ACTATGAATCCAGAATAAACACGCCAAGATAACAGCTAAATCAGCAAGGGTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR TCA 90 bp GCTGATTTAGCTGTTATCTTGGCGTGTTTATTCTGGATTCATAGTAGGAATGAGCTGGATGTGAAGAAGTaGGATCGATTTCGCAGGAAC +
Preference number: 4 (lower is better)
Translates to: ADLAVILACLFWIHSRNELDVKK*DRFRRN
Trigger: GTTCCTGCGAAATCGATCTCACTTCTTCACATCCAG...CTCATTCCTACTATGAATCCAGAATAAACACGCCAAGATAACAGCTAAATCAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR GCA 90 bp GGAACCCTTGCTGATTTAGCTGTTATCTTGGCGTGTTTATTCTGGATTCATAGTGTAAATTCCACTGTCTaGTGGCTGCATATGCGAGAT +
Preference number: 4 (lower is better)
Translates to: GTLADLAVILACLFWIHSVNSTV*WLHMRD
Trigger: ATCTCGCATATGCAGCCAGCAGACAGTGGAATTTAC...ACTATGAATCCAGAATAAACACGCCAAGATAACAGCTAAATCAGCAAGGGTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR CCA 90 bp ATCTTAAGAGTTCACTTAGAACACTTTTCTGGACTGCCTTTCAAAGTAGATAACGTTCACGAAACCGTCTaGGATGGTCACTTGCACCAC +
Preference number: 4 (lower is better)
Translates to: ILRVHLEHFSGLPFKVDNVHETV*DGHLHH
Trigger: GTGGTGCAAGTGACCATCCCAGACGGTTTCGTGAAC...GTTATCTACTTTGAAAGGCAGTCCAGAAAAGTGTTCTAAGTGAACTCTTAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR CCA 90 bp GGAACCCTTGCTGATTTAGCTGTTATCTTGGCGTGTTTATTCTGGATTCATAGTCTTTGGCTCATAGTCTaGTTCTTGGATGGTATCAGG +
Preference number: 4 (lower is better)
Translates to: GTLADLAVILACLFWIHSLWLIV*FLDGIR
Trigger: CCTGATACCATCCAAGAACCAGACTATGAGCCAAAG...ACTATGAATCCAGAATAAACACGCCAAGATAACAGCTAAATCAGCAAGGGTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR CCA 90 bp GCTGATTTAGCTGTTATCTTGGCGTGTTTATTCTGGATTCATAGTAGGAATGAGCTCCTGAGTAGGCTTTaGCTCATAGTCTGGTTCTTG +
Preference number: 4 (lower is better)
Translates to: ADLAVILACLFWIHSRNELLSRL*LIVWFL
Trigger: CAAGAACCAGACTATGAGCCAAAGCCTACTCAGGAG...CTCATTCCTACTATGAATCCAGAATAAACACGCCAAGATAACAGCTAAATCAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR TCA 90 bp ATCTTAAGAGTTCACTTAGAACACTTTTCTGGACTGCCTTTCAAAGTAGATAACTCCCGGTGGTTGGGTTaGAGTTTTCTTTCACTGGCA +
Preference number: 4 (lower is better)
Translates to: ILRVHLEHFSGLPFKVDNSRWLG*SFLSLA
Trigger: TGCCAGTGAAAGAAAACTTCAACCCAACCACCGGGA...GTTATCTACTTTGAAAGGCAGTCCAGAAAAGTGTTCTAAGTGAACTCTTAAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR TCA 90 bp GCTGATTTAGCTGTTATCTTGGCGTGTTTATTCTGGATTCATAGTAGGAATGAGTTGTCAGATTTCCAATaGCCAAAATCCCGGTGGTTG +
Preference number: 4 (lower is better)
Translates to: ADLAVILACLFWIHSRNELSDFQ*PKSRWL
Trigger: CAACCACCGGGATTTTGGTCATTGGAAATCTGACAA...CTCATTCCTACTATGAATCCAGAATAAACACGCCAAGATAACAGCTAAATCAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR TCA 90 bp AATTTGCCATGCTCAGATATTGGATACCAGGGTGATTTCTTGGGAAATCTAATATCAGGGCCAGTCTCATaGATGGAAGATGGTAGAGTT +
Preference number: 4 (lower is better)
Translates to: NLPCSDIGYQGDFLGNLISGPVS*MEDGRV
Trigger: AACTCTACCATCTTCCATTCATGAGACTGGCCCTGA...TATTAGATTTCCCAAGAAATCACCCTGGTATCCAATATCTGAGCATGGCAAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR TCA 90 bp GCTGATTTAGCTGTTATCTTGGCGTGTTTATTCTGGATTCATAGTAGGAATGAGTCCTGGCTAACAACGTaGAACCCCATCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: ADLAVILACLFWIHSRNESWLTT*NPISTK
Trigger: TTTAGTAGAGATGGGGTTTCACGTTGTTAGCCAGGA...CTCATTCCTACTATGAATCCAGAATAAACACGCCAAGATAACAGCTAAATCAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR TCA 90 bp GGAACCCTTGCTGATTTAGCTGTTATCTTGGCGTGTTTATTCTGGATTCATAGTTTTTTAGACACTGACTaGCTGCCTTTTCCTCCATAC +
Preference number: 4 (lower is better)
Translates to: GTLADLAVILACLFWIHSFLDTD*LPFPPY
Trigger: GTATGGAGGAAAAGGCAGTCAGTCAGTGTCTAAAAA...ACTATGAATCCAGAATAAACACGCCAAGATAACAGCTAAATCAGCAAGGGTTCC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000415430.7
CDS-3UTR GCA 90 bp GGAACCCTTGCTGATTTAGCTGTTATCTTGGCGTGTTTATTCTGGATTCATAGTCGAGATAGTGATAGATaGATTACCTGGATCGTTGGA +
Preference number: 4 (lower is better)
Translates to: GTLADLAVILACLFWIHSRDSDR*ITWIVG
Trigger: TCCAACGATCCAGGTAATGCATCTATCACTATCTCG...ACTATGAATCCAGAATAAACACGCCAAGATAACAGCTAAATCAGCAAGGGTTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR GCA 90 bp AATTTGCCATGCTCAGATATTGGATACCAGGGTGATTTCTTGGGAAATCTAATACCACTGTCTGCTGGCTaGATATGCGAGATAGTGATA +
Preference number: 4 (lower is better)
Translates to: NLPCSDIGYQGDFLGNLIPLSAG*ICEIVI
Trigger: TATCACTATCTCGCATATGCAGCCAGCAGACAGTGG...TATTAGATTTCCCAAGAAATCACCCTGGTATCCAATATCTGAGCATGGCAAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR CCA 90 bp ATCTTAAGAGTTCACTTAGAACACTTTTCTGGACTGCCTTTCAAAGTAGATAACAGAAAGACCACTGGATaGAAAGCTGTTCTCGGGAGG +
Preference number: 4 (lower is better)
Translates to: ILRVHLEHFSGLPFKVDNRKTTG*KAVLGR
Trigger: CCTCCCGAGAACAGCTTTCCATCCAGTGGTCTTTCT...GTTATCTACTTTGAAAGGCAGTCCAGAAAAGTGTTCTAAGTGAACTCTTAAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR CCA 90 bp GCTGATTTAGCTGTTATCTTGGCGTGTTTATTCTGGATTCATAGTAGGAATGAGAATTCCACTGTCTGCTaGCTGCATATGCGAGATAGT +
Preference number: 4 (lower is better)
Translates to: ADLAVILACLFWIHSRNENSTVC*LHMRDS
Trigger: ACTATCTCGCATATGCAGCCAGCAGACAGTGGAATT...CTCATTCCTACTATGAATCCAGAATAAACACGCCAAGATAACAGCTAAATCAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR CCA 90 bp AATTTGCCATGCTCAGATATTGGATACCAGGGTGATTTCTTGGGAAATCTAATAAGTGTGGCCAGTTTCTaGTCTTCCTTGAACGCTACA +
Preference number: 4 (lower is better)
Translates to: NLPCSDIGYQGDFLGNLISVASF*SSLNAT
Trigger: TGTAGCGTTCAAGGAAGACCAGAAACTGGCCACACT...TATTAGATTTCCCAAGAAATCACCCTGGTATCCAATATCTGAGCATGGCAAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR CCA 90 bp GCTGATTTAGCTGTTATCTTGGCGTGTTTATTCTGGATTCATAGTAGGAATGAGGAAAGGGAAATAGTGTaGCCAGTTTCTGGTCTTCCT +
Preference number: 4 (lower is better)
Translates to: ADLAVILACLFWIHSRNEEREIV*PVSGLP
Trigger: AGGAAGACCAGAAACTGGCCACACTATTTCCCTTTC...CTCATTCCTACTATGAATCCAGAATAAACACGCCAAGATAACAGCTAAATCAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR CCA 90 bp GGAACCCTTGCTGATTTAGCTGTTATCTTGGCGTGTTTATTCTGGATTCATAGTCAAAATCCCGGTGGTTaGGTTGAAGTTTTCTTTCAC +
Preference number: 4 (lower is better)
Translates to: GTLADLAVILACLFWIHSQNPGG*VEVFFH
Trigger: GTGAAAGAAAACTTCAACCCAACCACCGGGATTTTG...ACTATGAATCCAGAATAAACACGCCAAGATAACAGCTAAATCAGCAAGGGTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR CCA 90 bp ATCTTAAGAGTTCACTTAGAACACTTTTCTGGACTGCCTTTCAAAGTAGATAACGGTAGCGTCTTCTCTTaGCATTGCTTCGCTTTCTCC +
Preference number: 4 (lower is better)
Translates to: ILRVHLEHFSGLPFKVDNGSVFS*HCFAFS
Trigger: GGAGAAAGCGAAGCAATGCCAAGAGAAGACGCTACC...GTTATCTACTTTGAAAGGCAGTCCAGAAAAGTGTTCTAAGTGAACTCTTAAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR CCA 90 bp GCTGATTTAGCTGTTATCTTGGCGTGTTTATTCTGGATTCATAGTAGGAATGAGAGAGTTACTTCTAGTTaGGTAGCGTCTTCTCTTGGC +
Preference number: 4 (lower is better)
Translates to: ADLAVILACLFWIHSRNERVTSS*VASSLG
Trigger: GCCAAGAGAAGACGCTACCCAACTAGAAGTAACTCT...CTCATTCCTACTATGAATCCAGAATAAACACGCCAAGATAACAGCTAAATCAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR CCA 90 bp GCTGATTTAGCTGTTATCTTGGCGTGTTTATTCTGGATTCATAGTAGGAATGAGCTTTGGCTCATAGTCTaGTTCTTGGATGGTATCAGG +
Preference number: 4 (lower is better)
Translates to: ADLAVILACLFWIHSRNELWLIV*FLDGIR
Trigger: CCTGATACCATCCAAGAACCAGACTATGAGCCAAAG...CTCATTCCTACTATGAATCCAGAATAAACACGCCAAGATAACAGCTAAATCAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR CCA 90 bp GCTGATTTAGCTGTTATCTTGGCGTGTTTATTCTGGATTCATAGTAGGAATGAGGGAGGAGGTGGAGGTTaGTTAGGTTATTTGAATTCC +
Preference number: 4 (lower is better)
Translates to: ADLAVILACLFWIHSRNEGGGGG*LGYLNS
Trigger: GGAATTCAAATAACCTAACCAACCTCCACCTCCTCC...CTCATTCCTACTATGAATCCAGAATAAACACGCCAAGATAACAGCTAAATCAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR TCA 90 bp ATCTTAAGAGTTCACTTAGAACACTTTTCTGGACTGCCTTTCAAAGTAGATAACGTTTCTGGTCTTCCTTaGACGCTACAAAGGGGCTTA +
Preference number: 4 (lower is better)
Translates to: ILRVHLEHFSGLPFKVDNVSGLP*TLQRGL
Trigger: TAAGCCCCTTTGTAGCGTTCAAGGAAGACCAGAAAC...GTTATCTACTTTGAAAGGCAGTCCAGAAAAGTGTTCTAAGTGAACTCTTAAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR TCA 90 bp AATTTGCCATGCTCAGATATTGGATACCAGGGTGATTTCTTGGGAAATCTAATATTGTCAGATTTCCAATaGCCAAAATCCCGGTGGTTG +
Preference number: 4 (lower is better)
Translates to: NLPCSDIGYQGDFLGNLILSDFQ*PKSRWL
Trigger: CAACCACCGGGATTTTGGTCATTGGAAATCTGACAA...TATTAGATTTCCCAAGAAATCACCCTGGTATCCAATATCTGAGCATGGCAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR TCA 90 bp GCTGATTTAGCTGTTATCTTGGCGTGTTTATTCTGGATTCATAGTAGGAATGAGTCCAACTTCTGGATGTaGAGAAGTGAGATCGATTTC +
Preference number: 4 (lower is better)
Translates to: ADLAVILACLFWIHSRNESNFWM*RSEIDF
Trigger: GAAATCGATCTCACTTCTTCACATCCAGAAGTTGGA...CTCATTCCTACTATGAATCCAGAATAAACACGCCAAGATAACAGCTAAATCAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR TCA 90 bp ATCTTAAGAGTTCACTTAGAACACTTTTCTGGACTGCCTTTCAAAGTAGATAACTCAGGGCCAGTCTCATaGATGGAAGATGGTAGAGTT +
Preference number: 4 (lower is better)
Translates to: ILRVHLEHFSGLPFKVDNSGPVS*MEDGRV
Trigger: AACTCTACCATCTTCCATTCATGAGACTGGCCCTGA...GTTATCTACTTTGAAAGGCAGTCCAGAAAAGTGTTCTAAGTGAACTCTTAAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR TCA 90 bp AATTTGCCATGCTCAGATATTGGATACCAGGGTGATTTCTTGGGAAATCTAATATCCTGGCTAACAACGTaGAACCCCATCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: NLPCSDIGYQGDFLGNLISWLTT*NPISTK
Trigger: TTTAGTAGAGATGGGGTTTCACGTTGTTAGCCAGGA...TATTAGATTTCCCAAGAAATCACCCTGGTATCCAATATCTGAGCATGGCAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR TCA 90 bp ATCTTAAGAGTTCACTTAGAACACTTTTCTGGACTGCCTTTCAAAGTAGATAACTTGCCTGGACTAGGCTaGGTCTCAAATTGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: ILRVHLEHFSGLPFKVDNLPGLG*VSNWLL
Trigger: AAGAAGCCAATTTGAGACTCAGCCTAGTCCAGGCAA...GTTATCTACTTTGAAAGGCAGTCCAGAAAAGTGTTCTAAGTGAACTCTTAAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415430.7
CDS-3UTR GCA 90 bp GCTGATTTAGCTGTTATCTTGGCGTGTTTATTCTGGATTCATAGTAGGAATGAGAAAGACCTTCCAAAATaGGAACACCATTGTGTGGAG +
Preference number: 4 (lower is better)
Translates to: ADLAVILACLFWIHSRNEKDLPK*EHHCVE
Trigger: CTCCACACAATGGTGTTCGCATTTTGGAAGGTCTTT...CTCATTCCTACTATGAATCCAGAATAAACACGCCAAGATAACAGCTAAATCAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR GCA 90 bp GCTGATTTAGCTGTTATCTTGGCGTGTTTATTCTGGATTCATAGTAGGAATGAGCGAGATAGTGATAGATaGATTACCTGGATCGTTGGA +
Preference number: 4 (lower is better)
Translates to: ADLAVILACLFWIHSRNERDSDR*ITWIVG
Trigger: TCCAACGATCCAGGTAATGCATCTATCACTATCTCG...CTCATTCCTACTATGAATCCAGAATAAACACGCCAAGATAACAGCTAAATCAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR GCA 90 bp AATTTGCCATGCTCAGATATTGGATACCAGGGTGATTTCTTGGGAAATCTAATAGTAAATTCCACTGTCTaGTGGCTGCATATGCGAGAT +
Preference number: 4 (lower is better)
Translates to: NLPCSDIGYQGDFLGNLIVNSTV*WLHMRD
Trigger: ATCTCGCATATGCAGCCAGCAGACAGTGGAATTTAC...TATTAGATTTCCCAAGAAATCACCCTGGTATCCAATATCTGAGCATGGCAAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR GCA 90 bp GGAACCCTTGCTGATTTAGCTGTTATCTTGGCGTGTTTATTCTGGATTCATAGTTTTTGCCTTATTCCTTaGGAAGCACACAACAGAGAT +
Preference number: 4 (lower is better)
Translates to: GTLADLAVILACLFWIHSFCLIP*EAHNRD
Trigger: ATCTCTGTTGTGTGCTTCGCAAGGAATAAGGCAAAA...ACTATGAATCCAGAATAAACACGCCAAGATAACAGCTAAATCAGCAAGGGTTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR CCA 90 bp GCTGATTTAGCTGTTATCTTGGCGTGTTTATTCTGGATTCATAGTAGGAATGAGTCCATCTCCTTCTTATaGAAGAAAGACCACTGGATG +
Preference number: 4 (lower is better)
Translates to: ADLAVILACLFWIHSRNESISFL*KKDHWM
Trigger: CATCCAGTGGTCTTTCTTCCATAAGAAGGAGATGGA...CTCATTCCTACTATGAATCCAGAATAAACACGCCAAGATAACAGCTAAATCAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR CCA 90 bp AATTTGCCATGCTCAGATATTGGATACCAGGGTGATTTCTTGGGAAATCTAATAAATTCCACTGTCTGCTaGCTGCATATGCGAGATAGT +
Preference number: 4 (lower is better)
Translates to: NLPCSDIGYQGDFLGNLINSTVC*LHMRDS
Trigger: ACTATCTCGCATATGCAGCCAGCAGACAGTGGAATT...TATTAGATTTCCCAAGAAATCACCCTGGTATCCAATATCTGAGCATGGCAAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR CCA 90 bp ATCTTAAGAGTTCACTTAGAACACTTTTCTGGACTGCCTTTCAAAGTAGATAACACGTTGAGGATGCCTTaGTTTTGGCCGAGAAAGTCT +
Preference number: 4 (lower is better)
Translates to: ILRVHLEHFSGLPFKVDNTLRMP*FWPRKS
Trigger: AGACTTTCTCGGCCAAAACCAAGGCATCCTCAACGT...GTTATCTACTTTGAAAGGCAGTCCAGAAAAGTGTTCTAAGTGAACTCTTAAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR CCA 90 bp AATTTGCCATGCTCAGATATTGGATACCAGGGTGATTTCTTGGGAAATCTAATAGAAAGGGAAATAGTGTaGCCAGTTTCTGGTCTTCCT +
Preference number: 4 (lower is better)
Translates to: NLPCSDIGYQGDFLGNLIEREIV*PVSGLP
Trigger: AGGAAGACCAGAAACTGGCCACACTATTTCCCTTTC...TATTAGATTTCCCAAGAAATCACCCTGGTATCCAATATCTGAGCATGGCAAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR CCA 90 bp GCTGATTTAGCTGTTATCTTGGCGTGTTTATTCTGGATTCATAGTAGGAATGAGGTTTATCTTTGTCATTaGCTCAAGTTCCGCGATGGT +
Preference number: 4 (lower is better)
Translates to: ADLAVILACLFWIHSRNEVYLCH*LKFRDG
Trigger: ACCATCGCGGAACTTGAGCCAATGACAAAGATAAAC...CTCATTCCTACTATGAATCCAGAATAAACACGCCAAGATAACAGCTAAATCAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR CCA 90 bp GCTGATTTAGCTGTTATCTTGGCGTGTTTATTCTGGATTCATAGTAGGAATGAGTTCGCTTTCTCCCCTTaGGTTTATCTTTGTCATTGG +
Preference number: 4 (lower is better)
Translates to: ADLAVILACLFWIHSRNEFAFSP*VYLCHW
Trigger: CCAATGACAAAGATAAACCCAAGGGGAGAAAGCGAA...CTCATTCCTACTATGAATCCAGAATAAACACGCCAAGATAACAGCTAAATCAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR CCA 90 bp GCTGATTTAGCTGTTATCTTGGCGTGTTTATTCTGGATTCATAGTAGGAATGAGGGCCAGTCTCATGAATaGAAGATGGTAGAGTTACTT +
Preference number: 4 (lower is better)
Translates to: ADLAVILACLFWIHSRNEGQSHE*KMVELL
Trigger: AAGTAACTCTACCATCTTCCATTCATGAGACTGGCC...CTCATTCCTACTATGAATCCAGAATAAACACGCCAAGATAACAGCTAAATCAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR CCA 90 bp GGAACCCTTGCTGATTTAGCTGTTATCTTGGCGTGTTTATTCTGGATTCATAGTGCAAACATGCCTCTTTaGGCTTACTTATTGCGTATA +
Preference number: 4 (lower is better)
Translates to: GTLADLAVILACLFWIHSANMPL*AYLLRI
Trigger: TATACGCAATAAGTAAGCCCAAAGAGGCATGTTTGC...ACTATGAATCCAGAATAAACACGCCAAGATAACAGCTAAATCAGCAAGGGTTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415430.7
3UTR CAA 72 bp GGTAATACAGGAACCCTTGCTGATTTAGCTGTTATCTaGGCGTGTTTATTCTGGATTCATAGTAGGAATGAG +
Preference number: 4 (lower is better)
Translates to: GNTGTLADLAVI*ACLFWIHSRNE
Trigger: CTCATTCCTACTATGAATCCAGAATAAACACGCCAAGATAACAGCTAAATCAGCAAGGGTTCCTGTATTACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR TCA 90 bp ATCTTAAGAGTTCACTTAGAACACTTTTCTGGACTGCCTTTCAAAGTAGATAACTACAGGAACCCTTGCTaGTTTAGCTGTTATCTTGGC +
Preference number: 4 (lower is better)
Translates to: ILRVHLEHFSGLPFKVDNYRNPC*FSCYLG
Trigger: GCCAAGATAACAGCTAAATCAGCAAGGGTTCCTGTA...GTTATCTACTTTGAAAGGCAGTCCAGAAAAGTGTTCTAAGTGAACTCTTAAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR TCA 90 bp GGAACCCTTGCTGATTTAGCTGTTATCTTGGCGTGTTTATTCTGGATTCATAGTTATTGGATACCAGGGTaGTTTCTTGGGAAATCTAAT +
Preference number: 4 (lower is better)
Translates to: GTLADLAVILACLFWIHSYWIPG*FLGKSN
Trigger: ATTAGATTTCCCAAGAAATCACCCTGGTATCCAATA...ACTATGAATCCAGAATAAACACGCCAAGATAACAGCTAAATCAGCAAGGGTTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR TCA 90 bp GCTGATTTAGCTGTTATCTTGGCGTGTTTATTCTGGATTCATAGTAGGAATGAGCAGGGGAAGAAGAAGTaGTATCAGTGCATTTTAGTA +
Preference number: 4 (lower is better)
Translates to: ADLAVILACLFWIHSRNEQGKKK*YQCILV
Trigger: TACTAAAATGCACTGATATCACTTCTTCTTCCCCTG...CTCATTCCTACTATGAATCCAGAATAAACACGCCAAGATAACAGCTAAATCAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR TCA 90 bp ATCTTAAGAGTTCACTTAGAACACTTTTCTGGACTGCCTTTCAAAGTAGATAACGTCATTTTTAGACACTaGCTGACTGCCTTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: ILRVHLEHFSGLPFKVDNVIFRH*LTAFSS
Trigger: GGAGGAAAAGGCAGTCAGTCAGTGTCTAAAAATGAC...GTTATCTACTTTGAAAGGCAGTCCAGAAAAGTGTTCTAAGTGAACTCTTAAGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000415430.7
CDS-3UTR GCA 90 bp AATTTGCCATGCTCAGATATTGGATACCAGGGTGATTTCTTGGGAAATCTAATAAAAGACCTTCCAAAATaGGAACACCATTGTGTGGAG +
Preference number: 4 (lower is better)
Translates to: NLPCSDIGYQGDFLGNLIKDLPK*EHHCVE
Trigger: CTCCACACAATGGTGTTCGCATTTTGGAAGGTCTTT...TATTAGATTTCCCAAGAAATCACCCTGGTATCCAATATCTGAGCATGGCAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR GCA 90 bp GCTGATTTAGCTGTTATCTTGGCGTGTTTATTCTGGATTCATAGTAGGAATGAGTTTTGCCTTTGCTTTTaGCTTATTCCTTGCGAAGCA +
Preference number: 4 (lower is better)
Translates to: ADLAVILACLFWIHSRNEFCLCF*LIPCEA
Trigger: TGCTTCGCAAGGAATAAGGCAAAAGCAAAGGCAAAA...CTCATTCCTACTATGAATCCAGAATAAACACGCCAAGATAACAGCTAAATCAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR GCA 90 bp GCTGATTTAGCTGTTATCTTGGCGTGTTTATTCTGGATTCATAGTAGGAATGAGCCACCTTGTCATATGTaGATGTGGAACATAAGAGTA +
Preference number: 4 (lower is better)
Translates to: ADLAVILACLFWIHSRNEPPCHM*MWNIRV
Trigger: TACTCTTATGTTCCACATGCACATATGACAAGGTGG...CTCATTCCTACTATGAATCCAGAATAAACACGCCAAGATAACAGCTAAATCAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR GCA 90 bp AATTTGCCATGCTCAGATATTGGATACCAGGGTGATTTCTTGGGAAATCTAATAATCGCCAAGCAAACATaGCTCTTTGGGCTTACTTAT +
Preference number: 4 (lower is better)
Translates to: NLPCSDIGYQGDFLGNLIIAKQT*LFGLTY
Trigger: ATAAGTAAGCCCAAAGAGGCATGTTTGCTTGGCGAT...TATTAGATTTCCCAAGAAATCACCCTGGTATCCAATATCTGAGCATGGCAAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415430.7
CDS-3UTR CCA 90 bp AATTTGCCATGCTCAGATATTGGATACCAGGGTGATTTCTTGGGAAATCTAATAGATAGATGCATTACCTaGATCGTTGGACCCTGTAAT +
Preference number: 4 (lower is better)
Translates to: NLPCSDIGYQGDFLGNLIDRCIT*IVGPCN
Trigger: ATTACAGGGTCCAACGATCCAGGTAATGCATCTATC...TATTAGATTTCCCAAGAAATCACCCTGGTATCCAATATCTGAGCATGGCAAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR CCA 90 bp AATTTGCCATGCTCAGATATTGGATACCAGGGTGATTTCTTGGGAAATCTAATATTCGCTTTCTCCCCTTaGGTTTATCTTTGTCATTGG +
Preference number: 4 (lower is better)
Translates to: NLPCSDIGYQGDFLGNLIFAFSP*VYLCHW
Trigger: CCAATGACAAAGATAAACCCAAGGGGAGAAAGCGAA...TATTAGATTTCCCAAGAAATCACCCTGGTATCCAATATCTGAGCATGGCAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR CCA 90 bp ATCTTAAGAGTTCACTTAGAACACTTTTCTGGACTGCCTTTCAAAGTAGATAACAGAGTTACTTCTAGTTaGGTAGCGTCTTCTCTTGGC +
Preference number: 4 (lower is better)
Translates to: ILRVHLEHFSGLPFKVDNRVTSS*VASSLG
Trigger: GCCAAGAGAAGACGCTACCCAACTAGAAGTAACTCT...GTTATCTACTTTGAAAGGCAGTCCAGAAAAGTGTTCTAAGTGAACTCTTAAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR CCA 90 bp GGAACCCTTGCTGATTTAGCTGTTATCTTGGCGTGTTTATTCTGGATTCATAGTTTGGCGTGTTTATTCTaGATTCATAGTAGGAATGAG +
Preference number: 4 (lower is better)
Translates to: GTLADLAVILACLFWIHSLACLF*IHSRNE
Trigger: CTCATTCCTACTATGAATCCAGAATAAACACGCCAA...ACTATGAATCCAGAATAAACACGCCAAGATAACAGCTAAATCAGCAAGGGTTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR CCA 90 bp GGAACCCTTGCTGATTTAGCTGTTATCTTGGCGTGTTTATTCTGGATTCATAGTCTTAGAACACTTTTCTaGACTGCCTTTCAAAGTAGA +
Preference number: 4 (lower is better)
Translates to: GTLADLAVILACLFWIHSLRTLF*TAFQSR
Trigger: TCTACTTTGAAAGGCAGTCCAGAAAAGTGTTCTAAG...ACTATGAATCCAGAATAAACACGCCAAGATAACAGCTAAATCAGCAAGGGTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR CCA 90 bp ATCTTAAGAGTTCACTTAGAACACTTTTCTGGACTGCCTTTCAAAGTAGATAACCGAGCTGTGAGAAATTaGCTCCATCTCCTTCTTATG +
Preference number: 4 (lower is better)
Translates to: ILRVHLEHFSGLPFKVDNRAVRN*LHLLLM
Trigger: CATAAGAAGGAGATGGAGCCAATTTCTCACAGCTCG...GTTATCTACTTTGAAAGGCAGTCCAGAAAAGTGTTCTAAGTGAACTCTTAAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415430.7
CDS-3UTR TCA 90 bp ATCTTAAGAGTTCACTTAGAACACTTTTCTGGACTGCCTTTCAAAGTAGATAACTCCAACTTCTGGATGTaGAGAAGTGAGATCGATTTC +
Preference number: 4 (lower is better)
Translates to: ILRVHLEHFSGLPFKVDNSNFWM*RSEIDF
Trigger: GAAATCGATCTCACTTCTTCACATCCAGAAGTTGGA...GTTATCTACTTTGAAAGGCAGTCCAGAAAAGTGTTCTAAGTGAACTCTTAAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR TCA 90 bp GCTGATTTAGCTGTTATCTTGGCGTGTTTATTCTGGATTCATAGTAGGAATGAGTATTGGATACCAGGGTaGTTTCTTGGGAAATCTAAT +
Preference number: 4 (lower is better)
Translates to: ADLAVILACLFWIHSRNEYWIPG*FLGKSN
Trigger: ATTAGATTTCCCAAGAAATCACCCTGGTATCCAATA...CTCATTCCTACTATGAATCCAGAATAAACACGCCAAGATAACAGCTAAATCAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR TCA 90 bp GCTGATTTAGCTGTTATCTTGGCGTGTTTATTCTGGATTCATAGTAGGAATGAGTGCCTGTACATTATTTaGCAAAGTTGTGGGGATTTT +
Preference number: 4 (lower is better)
Translates to: ADLAVILACLFWIHSRNECLYII*QSCGDF
Trigger: AAAATCCCCACAACTTTGTCAAATAATGTACAGGCA...CTCATTCCTACTATGAATCCAGAATAAACACGCCAAGATAACAGCTAAATCAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR TCA 90 bp AATTTGCCATGCTCAGATATTGGATACCAGGGTGATTTCTTGGGAAATCTAATACAGGGGAAGAAGAAGTaGTATCAGTGCATTTTAGTA +
Preference number: 4 (lower is better)
Translates to: NLPCSDIGYQGDFLGNLIQGKKK*YQCILV
Trigger: TACTAAAATGCACTGATATCACTTCTTCTTCCCCTG...TATTAGATTTCCCAAGAAATCACCCTGGTATCCAATATCTGAGCATGGCAAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR TCA 90 bp AATTTGCCATGCTCAGATATTGGATACCAGGGTGATTTCTTGGGAAATCTAATAAAGGTGAGATGTGGGTaGAATATGATCATGAGAAAG +
Preference number: 4 (lower is better)
Translates to: NLPCSDIGYQGDFLGNLIKVRCG*NMIMRK
Trigger: CTTTCTCATGATCATATTTCACCCACATCTCACCTT...TATTAGATTTCCCAAGAAATCACCCTGGTATCCAATATCTGAGCATGGCAAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR GCA 90 bp AATTTGCCATGCTCAGATATTGGATACCAGGGTGATTTCTTGGGAAATCTAATAATTCGATCTTTAAATTaGCCGATGGCTACAGCTTGT +
Preference number: 4 (lower is better)
Translates to: NLPCSDIGYQGDFLGNLIIRSLN*PMATAC
Trigger: ACAAGCTGTAGCCATCGGGCAATTTAAAGATCGAAT...TATTAGATTTCCCAAGAAATCACCCTGGTATCCAATATCTGAGCATGGCAAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR GCA 90 bp AATTTGCCATGCTCAGATATTGGATACCAGGGTGATTTCTTGGGAAATCTAATATTTTGCCTTATTCCTTaGGAAGCACACAACAGAGAT +
Preference number: 4 (lower is better)
Translates to: NLPCSDIGYQGDFLGNLIFCLIP*EAHNRD
Trigger: ATCTCTGTTGTGTGCTTCGCAAGGAATAAGGCAAAA...TATTAGATTTCCCAAGAAATCACCCTGGTATCCAATATCTGAGCATGGCAAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR CCA 90 bp ATCTTAAGAGTTCACTTAGAACACTTTTCTGGACTGCCTTTCAAAGTAGATAACGATAGATGCATTACCTaGATCGTTGGACCCTGTAAT +
Preference number: 4 (lower is better)
Translates to: ILRVHLEHFSGLPFKVDNDRCIT*IVGPCN
Trigger: ATTACAGGGTCCAACGATCCAGGTAATGCATCTATC...GTTATCTACTTTGAAAGGCAGTCCAGAAAAGTGTTCTAAGTGAACTCTTAAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR CCA 90 bp GCTGATTTAGCTGTTATCTTGGCGTGTTTATTCTGGATTCATAGTAGGAATGAGTTGGCGTGTTTATTCTaGATTCATAGTAGGAATGAG +
Preference number: 4 (lower is better)
Translates to: ADLAVILACLFWIHSRNELACLF*IHSRNE
Trigger: CTCATTCCTACTATGAATCCAGAATAAACACGCCAA...CTCATTCCTACTATGAATCCAGAATAAACACGCCAAGATAACAGCTAAATCAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR CCA 90 bp GCTGATTTAGCTGTTATCTTGGCGTGTTTATTCTGGATTCATAGTAGGAATGAGCTTAGAACACTTTTCTaGACTGCCTTTCAAAGTAGA +
Preference number: 4 (lower is better)
Translates to: ADLAVILACLFWIHSRNELRTLF*TAFQSR
Trigger: TCTACTTTGAAAGGCAGTCCAGAAAAGTGTTCTAAG...CTCATTCCTACTATGAATCCAGAATAAACACGCCAAGATAACAGCTAAATCAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR TCA 90 bp ATCTTAAGAGTTCACTTAGAACACTTTTCTGGACTGCCTTTCAAAGTAGATAACAAGGTGAGATGTGGGTaGAATATGATCATGAGAAAG +
Preference number: 4 (lower is better)
Translates to: ILRVHLEHFSGLPFKVDNKVRCG*NMIMRK
Trigger: CTTTCTCATGATCATATTTCACCCACATCTCACCTT...GTTATCTACTTTGAAAGGCAGTCCAGAAAAGTGTTCTAAGTGAACTCTTAAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR CCA 90 bp GCTGATTTAGCTGTTATCTTGGCGTGTTTATTCTGGATTCATAGTAGGAATGAGTGTCATATGTGCATGTaGAACATAAGAGTAGCTAAA +
Preference number: 4 (lower is better)
Translates to: ADLAVILACLFWIHSRNECHMCM*NIRVAK
Trigger: TTTAGCTACTCTTATGTTCCACATGCACATATGACA...CTCATTCCTACTATGAATCCAGAATAAACACGCCAAGATAACAGCTAAATCAGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS CCA 90 bp GGCAGGCTCTGGGGCAGGCTCCTGAGTAGGCTTTGGCTCATAGTCTaGTTCTTGGATGGTATCAGGGCCAGTCTCATGAATGGAAGATGG +
Preference number: 5 (lower is better)
Translates to: GRLWGRLLSRLWLIV*FLDGIRASLMNGRW
Trigger: CCATCTTCCATTCATGAGACTGGCCCTGATACCATCCAAGAACCAGACTATGAGCCAAAGCCTACTCAGGAGCCTGCCCCAGAGCCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS CCA 90 bp AGGCTGAGTCTCAAATTGGCTTCTTCGATCACACCGAGGTTTGCCTaGCTTATCTGCTGGGCATCGCCAAGCAAACATGCCTCTTTGGGC +
Preference number: 5 (lower is better)
Translates to: RLSLKLASSITPRFA*LICWASPSKHASLG
Trigger: GCCCAAAGAGGCATGTTTGCTTGGCGATGCCCAGCAGATAAGCCAGGCAAACCTCGGTGTGATCGAAGAAGCCAATTTGAGACTCAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415430.7
CDS CCA 90 bp GATGAGAGTGACATTAGATCCAACAGTCACGTTCACGAAACCGTCTaGGATGGTCACTTGCACCACACTAACCTGACCTGCAAGGCAGCT +
Preference number: 5 (lower is better)
Translates to: DESDIRSNSHVHETV*DGHLHHTNLTCKAA
Trigger: AGCTGCCTTGCAGGTCAGGTTAGTGTGGTGCAAGTGACCATCCCAGACGGTTTCGTGAACGTGACTGTTGGATCTAATGTCACTCTCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217957.10
ENST00000415430.7
ENST00000458383.1
CDS CCA 90 bp AAATTGGCTTCTTCGATCACACCGAGGTTTGCCTGGCTTATCTGCTaGGCATCGCCAAGCAAACATGCCTCTTTGGGCTTACTTATTGCG +
Preference number: 5 (lower is better)
Translates to: KLASSITPRFAWLIC*ASPSKHASLGLLIA
Trigger: CGCAATAAGTAAGCCCAAAGAGGCATGTTTGCTTGGCGATGCCCAGCAGATAAGCCAGGCAAACCTCGGTGTGATCGAAGAAGCCAATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415430.7
CDS CCA 90 bp GAGAAATTGGCTCCATCTCCTTCTTATGGAAGAAAGACCACTGGATaGAAAGCTGTTCTCGGGAGGCCACAGTGGTGGTGTAGATGCAGA +
Preference number: 5 (lower is better)
Translates to: EKLAPSPSYGRKTTG*KAVLGRPQWWCRCR
Trigger: TCTGCATCTACACCACCACTGTGGCCTCCCGAGAACAGCTTTCCATCCAGTGGTCTTTCTTCCATAAGAAGGAGATGGAGCCAATTTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415430.7
ENST00000458383.1
CDS GCA 90 bp CTCAAATTGGCTTCTTCGATCACACCGAGGTTTGCCTGGCTTATCTaGTGGGCATCGCCAAGCAAACATGCCTCTTTGGGCTTACTTATT +
Preference number: 5 (lower is better)
Translates to: LKLASSITPRFAWLI*WASPSKHASLGLLI
Trigger: AATAAGTAAGCCCAAAGAGGCATGTTTGCTTGGCGATGCCCAGCAGATAAGCCAGGCAAACCTCGGTGTGATCGAAGAAGCCAATTTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415430.7
CDS-3UTR CAA 90 bp GCTGATTTAGCTGTTATCTTGGCGTGTTTATTCTGGATTCATAGTAGGAATGAGAGGCAGGAGAATCGCTaGAACCCAGGGAGCGGAGGT +
Preference number: 5 (lower is better)
Translates to: ADLAVILACLFWIHSRNERQENR*NPGSGG
Trigger: ACCTCCGCTCCCTGGGTTCAAGCGATTCTCCTGCCT...CTCATTCCTACTATGAATCCAGAATAAACACGCCAAGATAACAGCTAAATCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS CCA 90 bp ACTGTCTGCTGGCTGCATATGCGAGATAGTGATAGATGCATTACCTaGATCGTTGGACCCTGTAATTCGATCTTTAAATTGCCCGATGGC +
Preference number: 5 (lower is better)
Translates to: TVCWLHMRDSDRCIT*IVGPCNSIFKLPDG
Trigger: GCCATCGGGCAATTTAAAGATCGAATTACAGGGTCCAACGATCCAGGTAATGCATCTATCACTATCTCGCATATGCAGCCAGCAGACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217957.10
ENST00000415430.7
ENST00000458383.1
ENST00000485533.1
CDS-3UTR CAA 90 bp GCTGATTTAGCTGTTATCTTGGCGTGTTTATTCTGGATTCATAGTAGGAATGAGGAGGATGCCTTGGTTTaGGCCGAGAAAGTCTGGGGG +
Preference number: 5 (lower is better)
Translates to: ADLAVILACLFWIHSRNEEDALV*AEKVWG
Trigger: CCCCCAGACTTTCTCGGCCAAAACCAAGGCATCCTC...CTCATTCCTACTATGAATCCAGAATAAACACGCCAAGATAACAGCTAAATCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR CAA 90 bp GCTGATTTAGCTGTTATCTTGGCGTGTTTATTCTGGATTCATAGTAGGAATGAGCGATCACACCGAGGTTaGCCTGGCTTATCTGCTGGG +
Preference number: 5 (lower is better)
Translates to: ADLAVILACLFWIHSRNERSHRG*PGLSAG
Trigger: CCCAGCAGATAAGCCAGGCAAACCTCGGTGTGATCG...CTCATTCCTACTATGAATCCAGAATAAACACGCCAAGATAACAGCTAAATCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415430.7
CDS-3UTR CAA 90 bp AATTTGCCATGCTCAGATATTGGATACCAGGGTGATTTCTTGGGAAATCTAATAGAGGATGCCTTGGTTTaGGCCGAGAAAGTCTGGGGG +
Preference number: 5 (lower is better)
Translates to: NLPCSDIGYQGDFLGNLIEDALV*AEKVWG
Trigger: CCCCCAGACTTTCTCGGCCAAAACCAAGGCATCCTC...TATTAGATTTCCCAAGAAATCACCCTGGTATCCAATATCTGAGCATGGCAAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR CAA 90 bp GGAACCCTTGCTGATTTAGCTGTTATCTTGGCGTGTTTATTCTGGATTCATAGTGACGTTGAGGATGCCTaGGTTTTGGCCGAGAAAGTC +
Preference number: 5 (lower is better)
Translates to: GTLADLAVILACLFWIHSDVEDA*VLAEKV
Trigger: GACTTTCTCGGCCAAAACCAAGGCATCCTCAACGTC...ACTATGAATCCAGAATAAACACGCCAAGATAACAGCTAAATCAGCAAGGGTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR CAA 90 bp ATCTTAAGAGTTCACTTAGAACACTTTTCTGGACTGCCTTTCAAAGTAGATAACAGGCAGGAGAATCGCTaGAACCCAGGGAGCGGAGGT +
Preference number: 5 (lower is better)
Translates to: ILRVHLEHFSGLPFKVDNRQENR*NPGSGG
Trigger: ACCTCCGCTCCCTGGGTTCAAGCGATTCTCCTGCCT...GTTATCTACTTTGAAAGGCAGTCCAGAAAAGTGTTCTAAGTGAACTCTTAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR CAA 90 bp AATTTGCCATGCTCAGATATTGGATACCAGGGTGATTTCTTGGGAAATCTAATAGTCTGGGATGGTCACTaGCACCACACTAACCTGACC +
Preference number: 5 (lower is better)
Translates to: NLPCSDIGYQGDFLGNLIVWDGH*HHTNLT
Trigger: GGTCAGGTTAGTGTGGTGCAAGTGACCATCCCAGAC...TATTAGATTTCCCAAGAAATCACCCTGGTATCCAATATCTGAGCATGGCAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR CAA 90 bp GGAACCCTTGCTGATTTAGCTGTTATCTTGGCGTGTTTATTCTGGATTCATAGTCCCGATGGCTACAGCTaGTCCACCTTGAGAAAAGTA +
Preference number: 5 (lower is better)
Translates to: GTLADLAVILACLFWIHSPDGYS*STLRKV
Trigger: TACTTTTCTCAAGGTGGACAAGCTGTAGCCATCGGG...ACTATGAATCCAGAATAAACACGCCAAGATAACAGCTAAATCAGCAAGGGTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR CAA 90 bp GGAACCCTTGCTGATTTAGCTGTTATCTTGGCGTGTTTATTCTGGATTCATAGTATCCCGGTGGTTGGGTaGAAGTTTTCTTTCACTGGC +
Preference number: 5 (lower is better)
Translates to: GTLADLAVILACLFWIHSIPVVG*KFSFTG
Trigger: GCCAGTGAAAGAAAACTTCAACCCAACCACCGGGAT...ACTATGAATCCAGAATAAACACGCCAAGATAACAGCTAAATCAGCAAGGGTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR CAA 90 bp GCTGATTTAGCTGTTATCTTGGCGTGTTTATTCTGGATTCATAGTAGGAATGAGTTCCCCGAGCGTCTCTaGCGTGCGTCATTTTTAGAC +
Preference number: 5 (lower is better)
Translates to: ADLAVILACLFWIHSRNEFPERL*RASFLD
Trigger: GTCTAAAAATGACGCACGCAAGAGACGCTCGGGGAA...CTCATTCCTACTATGAATCCAGAATAAACACGCCAAGATAACAGCTAAATCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415430.7
CDS-3UTR CAA 90 bp ATCTTAAGAGTTCACTTAGAACACTTTTCTGGACTGCCTTTCAAAGTAGATAACGTCTGGGATGGTCACTaGCACCACACTAACCTGACC +
Preference number: 5 (lower is better)
Translates to: ILRVHLEHFSGLPFKVDNVWDGH*HHTNLT
Trigger: GGTCAGGTTAGTGTGGTGCAAGTGACCATCCCAGAC...GTTATCTACTTTGAAAGGCAGTCCAGAAAAGTGTTCTAAGTGAACTCTTAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR CAA 90 bp GGAACCCTTGCTGATTTAGCTGTTATCTTGGCGTGTTTATTCTGGATTCATAGTGCATTACCTGGATCGTaGGACCCTGTAATTCGATCT +
Preference number: 5 (lower is better)
Translates to: GTLADLAVILACLFWIHSALPGS*DPVIRS
Trigger: AGATCGAATTACAGGGTCCAACGATCCAGGTAATGC...ACTATGAATCCAGAATAAACACGCCAAGATAACAGCTAAATCAGCAAGGGTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR CAA 90 bp GGAACCCTTGCTGATTTAGCTGTTATCTTGGCGTGTTTATTCTGGATTCATAGTAGTTTCTGGTCTTCCTaGAACGCTACAAAGGGGCTT +
Preference number: 5 (lower is better)
Translates to: GTLADLAVILACLFWIHSSFWSS*NATKGL
Trigger: AAGCCCCTTTGTAGCGTTCAAGGAAGACCAGAAACT...ACTATGAATCCAGAATAAACACGCCAAGATAACAGCTAAATCAGCAAGGGTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR CAA 90 bp AATTTGCCATGCTCAGATATTGGATACCAGGGTGATTTCTTGGGAAATCTAATACGTCTTCTCTTGGCATaGCTTCGCTTTCTCCCCTTG +
Preference number: 5 (lower is better)
Translates to: NLPCSDIGYQGDFLGNLIRLLLA*LRFLPL
Trigger: CAAGGGGAGAAAGCGAAGCAATGCCAAGAGAAGACG...TATTAGATTTCCCAAGAAATCACCCTGGTATCCAATATCTGAGCATGGCAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS GCA 90 bp GTAAATTCCACTGTCTGCTGGCTGCATATGCGAGATAGTGATAGATaGATTACCTGGATCGTTGGACCCTGTAATTCGATCTTTAAATTG +
Preference number: 5 (lower is better)
Translates to: VNSTVCWLHMRDSDR*ITWIVGPCNSIFKL
Trigger: CAATTTAAAGATCGAATTACAGGGTCCAACGATCCAGGTAATGCATCTATCACTATCTCGCATATGCAGCCAGCAGACAGTGGAATTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217957.10
ENST00000415430.7
ENST00000458383.1
ENST00000485533.1
CDS GCA 90 bp TGTCATTGGCTCAAGTTCCGCGATGGTCTTAGAATTTCTTTCTTTTaGCTTTGCTTTTGCCTTATTCCTTGCGAAGCACACAACAGAGAT +
Preference number: 5 (lower is better)
Translates to: CHWLKFRDGLRISFF*LCFCLIPCEAHNRD
Trigger: ATCTCTGTTGTGTGCTTCGCAAGGAATAAGGCAAAAGCAAAGGCAAAAGAAAGAAATTCTAAGACCATCGCGGAACTTGAGCCAATGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR CAA 90 bp GCTGATTTAGCTGTTATCTTGGCGTGTTTATTCTGGATTCATAGTAGGAATGAGGCATTACCTGGATCGTaGGACCCTGTAATTCGATCT +
Preference number: 5 (lower is better)
Translates to: ADLAVILACLFWIHSRNEALPGS*DPVIRS
Trigger: AGATCGAATTACAGGGTCCAACGATCCAGGTAATGC...CTCATTCCTACTATGAATCCAGAATAAACACGCCAAGATAACAGCTAAATCAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR CAA 90 bp ATCTTAAGAGTTCACTTAGAACACTTTTCTGGACTGCCTTTCAAAGTAGATAACGACGTTGAGGATGCCTaGGTTTTGGCCGAGAAAGTC +
Preference number: 5 (lower is better)
Translates to: ILRVHLEHFSGLPFKVDNDVEDA*VLAEKV
Trigger: GACTTTCTCGGCCAAAACCAAGGCATCCTCAACGTC...GTTATCTACTTTGAAAGGCAGTCCAGAAAAGTGTTCTAAGTGAACTCTTAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR CAA 90 bp GCTGATTTAGCTGTTATCTTGGCGTGTTTATTCTGGATTCATAGTAGGAATGAGACTAACACACTGACGTaGAGGATGCCTTGGTTTTGG +
Preference number: 5 (lower is better)
Translates to: ADLAVILACLFWIHSRNETNTLT*RMPWFW
Trigger: CCAAAACCAAGGCATCCTCAACGTCAGTGTGTTAGT...CTCATTCCTACTATGAATCCAGAATAAACACGCCAAGATAACAGCTAAATCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR CAA 90 bp GCTGATTTAGCTGTTATCTTGGCGTGTTTATTCTGGATTCATAGTAGGAATGAGAGTTTCTGGTCTTCCTaGAACGCTACAAAGGGGCTT +
Preference number: 5 (lower is better)
Translates to: ADLAVILACLFWIHSRNESFWSS*NATKGL
Trigger: AAGCCCCTTTGTAGCGTTCAAGGAAGACCAGAAACT...CTCATTCCTACTATGAATCCAGAATAAACACGCCAAGATAACAGCTAAATCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR CAA 90 bp GGAACCCTTGCTGATTTAGCTGTTATCTTGGCGTGTTTATTCTGGATTCATAGTCTTTTGCCTTATTCCTaGCGAAGCACACAACAGAGA +
Preference number: 5 (lower is better)
Translates to: GTLADLAVILACLFWIHSLLPYS*RSTQQR
Trigger: TCTCTGTTGTGTGCTTCGCAAGGAATAAGGCAAAAG...ACTATGAATCCAGAATAAACACGCCAAGATAACAGCTAAATCAGCAAGGGTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR CAA 90 bp ATCTTAAGAGTTCACTTAGAACACTTTTCTGGACTGCCTTTCAAAGTAGATAACCGTCTTCTCTTGGCATaGCTTCGCTTTCTCCCCTTG +
Preference number: 5 (lower is better)
Translates to: ILRVHLEHFSGLPFKVDNRLLLA*LRFLPL
Trigger: CAAGGGGAGAAAGCGAAGCAATGCCAAGAGAAGACG...GTTATCTACTTTGAAAGGCAGTCCAGAAAAGTGTTCTAAGTGAACTCTTAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR CAA 90 bp AATTTGCCATGCTCAGATATTGGATACCAGGGTGATTTCTTGGGAAATCTAATACTCATAGTCTGGTTCTaGGATGGTATCAGGGCCAGT +
Preference number: 5 (lower is better)
Translates to: NLPCSDIGYQGDFLGNLILIVWF*DGIRAS
Trigger: ACTGGCCCTGATACCATCCAAGAACCAGACTATGAG...TATTAGATTTCCCAAGAAATCACCCTGGTATCCAATATCTGAGCATGGCAAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR CAA 90 bp AATTTGCCATGCTCAGATATTGGATACCAGGGTGATTTCTTGGGAAATCTAATAACTAACACACTGACGTaGAGGATGCCTTGGTTTTGG +
Preference number: 5 (lower is better)
Translates to: NLPCSDIGYQGDFLGNLITNTLT*RMPWFW
Trigger: CCAAAACCAAGGCATCCTCAACGTCAGTGTGTTAGT...TATTAGATTTCCCAAGAAATCACCCTGGTATCCAATATCTGAGCATGGCAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR CAA 90 bp ATCTTAAGAGTTCACTTAGAACACTTTTCTGGACTGCCTTTCAAAGTAGATAACATCCCGGTGGTTGGGTaGAAGTTTTCTTTCACTGGC +
Preference number: 5 (lower is better)
Translates to: ILRVHLEHFSGLPFKVDNIPVVG*KFSFTG
Trigger: GCCAGTGAAAGAAAACTTCAACCCAACCACCGGGAT...GTTATCTACTTTGAAAGGCAGTCCAGAAAAGTGTTCTAAGTGAACTCTTAAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR CAA 90 bp GCTGATTTAGCTGTTATCTTGGCGTGTTTATTCTGGATTCATAGTAGGAATGAGATTTCGCAGGAACTATaGCCAAGTCTGTTGATGGCA +
Preference number: 5 (lower is better)
Translates to: ADLAVILACLFWIHSRNEISQEL*PSLLMA
Trigger: TGCCATCAACAGACTTGGCAATAGTTCCTGCGAAAT...CTCATTCCTACTATGAATCCAGAATAAACACGCCAAGATAACAGCTAAATCAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR CAA 90 bp AATTTGCCATGCTCAGATATTGGATACCAGGGTGATTTCTTGGGAAATCTAATACCCTTGGGTTTATCTTaGTCATTGGCTCAAGTTCCG +
Preference number: 5 (lower is better)
Translates to: NLPCSDIGYQGDFLGNLIPLGLS*SLAQVP
Trigger: CGGAACTTGAGCCAATGACAAAGATAAACCCAAGGG...TATTAGATTTCCCAAGAAATCACCCTGGTATCCAATATCTGAGCATGGCAAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR CAA 90 bp GCTGATTTAGCTGTTATCTTGGCGTGTTTATTCTGGATTCATAGTAGGAATGAGCTTCGCTTTCTCCCCTaGGGTTTATCTTTGTCATTG +
Preference number: 5 (lower is better)
Translates to: ADLAVILACLFWIHSRNELRFLP*GLSLSL
Trigger: CAATGACAAAGATAAACCCAAGGGGAGAAAGCGAAG...CTCATTCCTACTATGAATCCAGAATAAACACGCCAAGATAACAGCTAAATCAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR CAA 90 bp ATCTTAAGAGTTCACTTAGAACACTTTTCTGGACTGCCTTTCAAAGTAGATAACCTCATAGTCTGGTTCTaGGATGGTATCAGGGCCAGT +
Preference number: 5 (lower is better)
Translates to: ILRVHLEHFSGLPFKVDNLIVWF*DGIRAS
Trigger: ACTGGCCCTGATACCATCCAAGAACCAGACTATGAG...GTTATCTACTTTGAAAGGCAGTCCAGAAAAGTGTTCTAAGTGAACTCTTAAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR CAA 90 bp GGAACCCTTGCTGATTTAGCTGTTATCTTGGCGTGTTTATTCTGGATTCATAGTCACTTGCCCTGTCATTaGTTATGCTTACGTGTTAGT +
Preference number: 5 (lower is better)
Translates to: GTLADLAVILACLFWIHSHLPCH*LCLRVS
Trigger: ACTAACACGTAAGCATAACAAATGACAGGGCAAGTG...ACTATGAATCCAGAATAAACACGCCAAGATAACAGCTAAATCAGCAAGGGTTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR CAA 90 bp GCTGATTTAGCTGTTATCTTGGCGTGTTTATTCTGGATTCATAGTAGGAATGAGTGCCATGCTCAGATATaGGATACCAGGGTGATTTCT +
Preference number: 5 (lower is better)
Translates to: ADLAVILACLFWIHSRNECHAQI*DTRVIS
Trigger: AGAAATCACCCTGGTATCCAATATCTGAGCATGGCA...CTCATTCCTACTATGAATCCAGAATAAACACGCCAAGATAACAGCTAAATCAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR CAA 90 bp GCTGATTTAGCTGTTATCTTGGCGTGTTTATTCTGGATTCATAGTAGGAATGAGAATTCGATCTTTAAATaGCCCGATGGCTACAGCTTG +
Preference number: 5 (lower is better)
Translates to: ADLAVILACLFWIHSRNENSIFK*PDGYSL
Trigger: CAAGCTGTAGCCATCGGGCAATTTAAAGATCGAATT...CTCATTCCTACTATGAATCCAGAATAAACACGCCAAGATAACAGCTAAATCAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR CAA 90 bp AATTTGCCATGCTCAGATATTGGATACCAGGGTGATTTCTTGGGAAATCTAATACTTTTGCCTTATTCCTaGCGAAGCACACAACAGAGA +
Preference number: 5 (lower is better)
Translates to: NLPCSDIGYQGDFLGNLILLPYS*RSTQQR
Trigger: TCTCTGTTGTGTGCTTCGCAAGGAATAAGGCAAAAG...TATTAGATTTCCCAAGAAATCACCCTGGTATCCAATATCTGAGCATGGCAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR CAA 90 bp AATTTGCCATGCTCAGATATTGGATACCAGGGTGATTTCTTGGGAAATCTAATACTTTTGCCTTTGCTTTaGCCTTATTCCTTGCGAAGC +
Preference number: 5 (lower is better)
Translates to: NLPCSDIGYQGDFLGNLILLPLL*PYSLRS
Trigger: GCTTCGCAAGGAATAAGGCAAAAGCAAAGGCAAAAG...TATTAGATTTCCCAAGAAATCACCCTGGTATCCAATATCTGAGCATGGCAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR CAA 90 bp ATCTTAAGAGTTCACTTAGAACACTTTTCTGGACTGCCTTTCAAAGTAGATAACCCCTTGGGTTTATCTTaGTCATTGGCTCAAGTTCCG +
Preference number: 5 (lower is better)
Translates to: ILRVHLEHFSGLPFKVDNPLGLS*SLAQVP
Trigger: CGGAACTTGAGCCAATGACAAAGATAAACCCAAGGG...GTTATCTACTTTGAAAGGCAGTCCAGAAAAGTGTTCTAAGTGAACTCTTAAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR CAA 90 bp AATTTGCCATGCTCAGATATTGGATACCAGGGTGATTTCTTGGGAAATCTAATACTTCGCTTTCTCCCCTaGGGTTTATCTTTGTCATTG +
Preference number: 5 (lower is better)
Translates to: NLPCSDIGYQGDFLGNLILRFLP*GLSLSL
Trigger: CAATGACAAAGATAAACCCAAGGGGAGAAAGCGAAG...TATTAGATTTCCCAAGAAATCACCCTGGTATCCAATATCTGAGCATGGCAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR CAA 90 bp GGAACCCTTGCTGATTTAGCTGTTATCTTGGCGTGTTTATTCTGGATTCATAGTCTAATTAATGCCACCTaGTCATATGTGCATGTGGAA +
Preference number: 5 (lower is better)
Translates to: GTLADLAVILACLFWIHSLINAT*SYVHVE
Trigger: TTCCACATGCACATATGACAAGGTGGCATTAATTAG...ACTATGAATCCAGAATAAACACGCCAAGATAACAGCTAAATCAGCAAGGGTTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR CAA 90 bp ATCTTAAGAGTTCACTTAGAACACTTTTCTGGACTGCCTTTCAAAGTAGATAACATTTCGCAGGAACTATaGCCAAGTCTGTTGATGGCA +
Preference number: 5 (lower is better)
Translates to: ILRVHLEHFSGLPFKVDNISQEL*PSLLMA
Trigger: TGCCATCAACAGACTTGGCAATAGTTCCTGCGAAAT...GTTATCTACTTTGAAAGGCAGTCCAGAAAAGTGTTCTAAGTGAACTCTTAAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR CAA 90 bp GGAACCCTTGCTGATTTAGCTGTTATCTTGGCGTGTTTATTCTGGATTCATAGTTTCTTTCTTTTGCCTTaGCTTTTGCCTTATTCCTTG +
Preference number: 5 (lower is better)
Translates to: GTLADLAVILACLFWIHSFFLLP*LLPYSL
Trigger: CAAGGAATAAGGCAAAAGCAAAGGCAAAAGAAAGAA...ACTATGAATCCAGAATAAACACGCCAAGATAACAGCTAAATCAGCAAGGGTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR CAA 90 bp GGAACCCTTGCTGATTTAGCTGTTATCTTGGCGTGTTTATTCTGGATTCATAGTGATTTAGCTGTTATCTaGGCGTGTTTATTCTGGATT +
Preference number: 5 (lower is better)
Translates to: GTLADLAVILACLFWIHSDLAVI*ACLFWI
Trigger: AATCCAGAATAAACACGCCAAGATAACAGCTAAATC...ACTATGAATCCAGAATAAACACGCCAAGATAACAGCTAAATCAGCAAGGGTTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR CAA 90 bp AATTTGCCATGCTCAGATATTGGATACCAGGGTGATTTCTTGGGAAATCTAATACACTTGCCCTGTCATTaGTTATGCTTACGTGTTAGT +
Preference number: 5 (lower is better)
Translates to: NLPCSDIGYQGDFLGNLIHLPCH*LCLRVS
Trigger: ACTAACACGTAAGCATAACAAATGACAGGGCAAGTG...TATTAGATTTCCCAAGAAATCACCCTGGTATCCAATATCTGAGCATGGCAAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR CAA 90 bp GCTGATTTAGCTGTTATCTTGGCGTGTTTATTCTGGATTCATAGTAGGAATGAGCTAATTAATGCCACCTaGTCATATGTGCATGTGGAA +
Preference number: 5 (lower is better)
Translates to: ADLAVILACLFWIHSRNELINAT*SYVHVE
Trigger: TTCCACATGCACATATGACAAGGTGGCATTAATTAG...CTCATTCCTACTATGAATCCAGAATAAACACGCCAAGATAACAGCTAAATCAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR CAA 90 bp ATCTTAAGAGTTCACTTAGAACACTTTTCTGGACTGCCTTTCAAAGTAGATAACACGAGCTGTGAGAAATaGGCTCCATCTCCTTCTTAT +
Preference number: 5 (lower is better)
Translates to: ILRVHLEHFSGLPFKVDNTSCEK*APSPSY
Trigger: ATAAGAAGGAGATGGAGCCAATTTCTCACAGCTCGT...GTTATCTACTTTGAAAGGCAGTCCAGAAAAGTGTTCTAAGTGAACTCTTAAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415430.7
CDS-3UTR CAA 90 bp ATCTTAAGAGTTCACTTAGAACACTTTTCTGGACTGCCTTTCAAAGTAGATAACAATTCGATCTTTAAATaGCCCGATGGCTACAGCTTG +
Preference number: 5 (lower is better)
Translates to: ILRVHLEHFSGLPFKVDNNSIFK*PDGYSL
Trigger: CAAGCTGTAGCCATCGGGCAATTTAAAGATCGAATT...GTTATCTACTTTGAAAGGCAGTCCAGAAAAGTGTTCTAAGTGAACTCTTAAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR CAA 90 bp GCTGATTTAGCTGTTATCTTGGCGTGTTTATTCTGGATTCATAGTAGGAATGAGTTCTTTCTTTTGCCTTaGCTTTTGCCTTATTCCTTG +
Preference number: 5 (lower is better)
Translates to: ADLAVILACLFWIHSRNEFFLLP*LLPYSL
Trigger: CAAGGAATAAGGCAAAAGCAAAGGCAAAAGAAAGAA...CTCATTCCTACTATGAATCCAGAATAAACACGCCAAGATAACAGCTAAATCAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR CAA 90 bp ATCTTAAGAGTTCACTTAGAACACTTTTCTGGACTGCCTTTCAAAGTAGATAACCTTGTTAGAAGAAGGTaGGTCAAAATGGAAGGAGGA +
Preference number: 5 (lower is better)
Translates to: ILRVHLEHFSGLPFKVDNLVRRR*VKMEGG
Trigger: TCCTCCTTCCATTTTGACCAACCTTCTTCTAACAAG...GTTATCTACTTTGAAAGGCAGTCCAGAAAAGTGTTCTAAGTGAACTCTTAAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR CAA 90 bp GCTGATTTAGCTGTTATCTTGGCGTGTTTATTCTGGATTCATAGTAGGAATGAGACAACACAGGTACTGTaGCAAAACTCAACTAAGTTA +
Preference number: 5 (lower is better)
Translates to: ADLAVILACLFWIHSRNETTQVL*QNSTKL
Trigger: TAACTTAGTTGAGTTTTGCAACAGTACCTGTGTTGT...CTCATTCCTACTATGAATCCAGAATAAACACGCCAAGATAACAGCTAAATCAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS-3UTR CAA 90 bp ATCTTAAGAGTTCACTTAGAACACTTTTCTGGACTGCCTTTCAAAGTAGATAACAGCAAACATGCCTCTTaGGGCTTACTTATTGCGTAT +
Preference number: 5 (lower is better)
Translates to: ILRVHLEHFSGLPFKVDNSKHAS*GLLIAY
Trigger: ATACGCAATAAGTAAGCCCAAAGAGGCATGTTTGCT...GTTATCTACTTTGAAAGGCAGTCCAGAAAAGTGTTCTAAGTGAACTCTTAAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415430.7
CDS-3UTR CAA 90 bp ATCTTAAGAGTTCACTTAGAACACTTTTCTGGACTGCCTTTCAAAGTAGATAACACAACACAGGTACTGTaGCAAAACTCAACTAAGTTA +
Preference number: 5 (lower is better)
Translates to: ILRVHLEHFSGLPFKVDNTTQVL*QNSTKL
Trigger: TAACTTAGTTGAGTTTTGCAACAGTACCTGTGTTGT...GTTATCTACTTTGAAAGGCAGTCCAGAAAAGTGTTCTAAGTGAACTCTTAAGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS CCA 72 bp TGGCTCTGGCTCTGGCTCCAATTCCGACTGCGTTTCTaGCTCCAGCTCCAGCTCGATGTCAAGGTCAGGCAC +
Preference number: 6 (lower is better)
Translates to: WLWLWLQFRLRF*LQLQLDVKVRH
Trigger: GTGCCTGACCTTGACATCGAGCTGGAGCTGGAGCCAGAAACGCAGTCGGAATTGGAGCCAGAGCCAGAGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS GCA 72 bp GCTTCTTCGATCACACCGAGGTTTGCCTGGCTTATCTaGTGGGCATCGCCAAGCAAACATGCCTCTTTGGGC +
Preference number: 6 (lower is better)
Translates to: ASSITPRFAWLI*WASPSKHASLG
Trigger: GCCCAAAGAGGCATGTTTGCTTGGCGATGCCCAGCAGATAAGCCAGGCAAACCTCGGTGTGATCGAAGAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415430.7
CDS CCA 72 bp TGGGGCAGGCTCCTGAGTAGGCTTTGGCTCATAGTCTaGTTCTTGGATGGTATCAGGGCCAGTCTCATGAAT +
Preference number: 6 (lower is better)
Translates to: WGRLLSRLWLIV*FLDGIRASLMN
Trigger: ATTCATGAGACTGGCCCTGATACCATCCAAGAACCAGACTATGAGCCAAAGCCTACTCAGGAGCCTGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS CCA 72 bp TCTTCGATCACACCGAGGTTTGCCTGGCTTATCTGCTaGGCATCGCCAAGCAAACATGCCTCTTTGGGCTTA +
Preference number: 6 (lower is better)
Translates to: SSITPRFAWLIC*ASPSKHASLGL
Trigger: TAAGCCCAAAGAGGCATGTTTGCTTGGCGATGCCCAGCAGATAAGCCAGGCAAACCTCGGTGTGATCGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415430.7
CDS CCA 72 bp CTCAAATTGGCTTCTTCGATCACACCGAGGTTTGCCTaGCTTATCTGCTGGGCATCGCCAAGCAAACATGCC +
Preference number: 6 (lower is better)
Translates to: LKLASSITPRFA*LICWASPSKHA
Trigger: GGCATGTTTGCTTGGCGATGCCCAGCAGATAAGCCAGGCAAACCTCGGTGTGATCGAAGAAGCCAATTTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415430.7
CDS GCA 72 bp GAGTCTCAAATTGGCTTCTTCGATCACACCGAGGTTTaGCTGGCTTATCTGCTGGGCATCGCCAAGCAAACA +
Preference number: 6 (lower is better)
Translates to: ESQIGFFDHTEV*LAYLLGIAKQT
Trigger: TGTTTGCTTGGCGATGCCCAGCAGATAAGCCAGGCAAACCTCGGTGTGATCGAAGAAGCCAATTTGAGACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415430.7
CDS CCA 72 bp GACATTAGATCCAACAGTCACGTTCACGAAACCGTCTaGGATGGTCACTTGCACCACACTAACCTGACCTGC +
Preference number: 6 (lower is better)
Translates to: DIRSNSHVHETV*DGHLHHTNLTC
Trigger: GCAGGTCAGGTTAGTGTGGTGCAAGTGACCATCCCAGACGGTTTCGTGAACGTGACTGTTGGATCTAATGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217957.10
ENST00000415430.7
ENST00000458383.1
CDS CAA 72 bp CAAAGGGGCTTAGAAGGTTTCACTAACACACTGACGTaGAGGATGCCTTGGTTTTGGCCGAGAAAGTCTGGG +
Preference number: 6 (lower is better)
Translates to: QRGLEGFTNTLT*RMPWFWPRKSG
Trigger: CCCAGACTTTCTCGGCCAAAACCAAGGCATCCTCAACGTCAGTGTGTTAGTGAAACCTTCTAAGCCCCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217957.10
ENST00000415430.7
ENST00000485533.1
CDS CAA 72 bp AGGCTCCTGAGTAGGCTTTGGCTCATAGTCTGGTTCTaGGATGGTATCAGGGCCAGTCTCATGAATGGAAGA +
Preference number: 6 (lower is better)
Translates to: RLLSRLWLIVWF*DGIRASLMNGR
Trigger: TCTTCCATTCATGAGACTGGCCCTGATACCATCCAAGAACCAGACTATGAGCCAAAGCCTACTCAGGAGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS CCA 72 bp GACGTTGAGGATGCCTTGGTTTTGGCCGAGAAAGTCTaGGGGGTTGTTAACATCGCAGATGTAAATTCCACT +
Preference number: 6 (lower is better)
Translates to: DVEDALVLAEKV*GVVNIADVNST
Trigger: AGTGGAATTTACATCTGCGATGTTAACAACCCCCCAGACTTTCTCGGCCAAAACCAAGGCATCCTCAACGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217957.10
ENST00000415430.7
ENST00000485533.1
CDS CCA 72 bp AGAGAGACAGGAAAGGGAAATAGTGTGGCCAGTTTCTaGTCTTCCTTGAACGCTACAAAGGGGCTTAGAAGG +
Preference number: 6 (lower is better)
Translates to: RETGKGNSVASF*SSLNATKGLRR
Trigger: CCTTCTAAGCCCCTTTGTAGCGTTCAAGGAAGACCAGAAACTGGCCACACTATTTCCCTTTCCTGTCTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217957.10
ENST00000415430.7
ENST00000485533.1
CDS CCA 72 bp AGCGTCTTCTCTTGGCATTGCTTCGCTTTCTCCCCTTaGGTTTATCTTTGTCATTGGCTCAAGTTCCGCGAT +
Preference number: 6 (lower is better)
Translates to: SVFSWHCFAFSP*VYLCHWLKFRD
Trigger: ATCGCGGAACTTGAGCCAATGACAAAGATAAACCCAAGGGGAGAAAGCGAAGCAATGCCAAGAGAAGACGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217957.10
ENST00000415430.7
CDS CAA 90 bp GCTGGCTGCATATGCGAGATAGTGATAGATGCATTACCTGGATCGTaGGACCCTGTAATTCGATCTTTAAATTGCCCGATGGCTACAGCT +
Preference number: 6 (lower is better)
Translates to: AGCICEIVIDALPGS*DPVIRSLNCPMATA
Trigger: AGCTGTAGCCATCGGGCAATTTAAAGATCGAATTACAGGGTCCAACGATCCAGGTAATGCATCTATCACTATCTCGCATATGCAGCCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217957.10
ENST00000415430.7
ENST00000458383.1
ENST00000485533.1
CDS GCA 72 bp ACTGTCTGCTGGCTGCATATGCGAGATAGTGATAGATaGATTACCTGGATCGTTGGACCCTGTAATTCGATC +
Preference number: 6 (lower is better)
Translates to: TVCWLHMRDSDR*ITWIVGPCNSI
Trigger: GATCGAATTACAGGGTCCAACGATCCAGGTAATGCATCTATCACTATCTCGCATATGCAGCCAGCAGACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217957.10
ENST00000415430.7
ENST00000458383.1
ENST00000485533.1
CDS CAA 72 bp ACCTGGATCGTTGGACCCTGTAATTCGATCTTTAAATaGCCCGATGGCTACAGCTTGTCCACCTTGAGAAAA +
Preference number: 6 (lower is better)
Translates to: TWIVGPCNSIFK*PDGYSLSTLRK
Trigger: TTTTCTCAAGGTGGACAAGCTGTAGCCATCGGGCAATTTAAAGATCGAATTACAGGGTCCAACGATCCAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217957.10
ENST00000415430.7
ENST00000458383.1
ENST00000485533.1
CDS CAA 72 bp ATCTTTAAATTGCCCGATGGCTACAGCTTGTCCACCTaGAGAAAAGTAAATCTGGAGTTCAGCCTGCTGTCC +
Preference number: 6 (lower is better)
Translates to: IFKLPDGYSLST*RKVNLEFSLLS
Trigger: GGACAGCAGGCTGAACTCCAGATTTACTTTTCTCAAGGTGGACAAGCTGTAGCCATCGGGCAATTTAAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485533.1
CDS CAA 90 bp GTTGGACCCTGTAATTCGATCTTTAAATTGCCCGATGGCTACAGCTaGTCCACCTTGAGAAAAGTAAATCTCAGAGGTCCAGCTACATCT +
Preference number: 6 (lower is better)
Translates to: VGPCNSIFKLPDGYS*STLRKVNLRGPATS
Trigger: AGATGTAGCTGGACCTCTGAGATTTACTTTTCTCAAGGTGGACAAGCTGTAGCCATCGGGCAATTTAAAGATCGAATTACAGGGTCCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415430.7
ENST00000458383.1
CDS GCA 72 bp GGGGTTGTTAACATCGCAGATGTAAATTCCACTGTCTaGTGGCTGCATATGCGAGATAGTGATAGATGCATT +
Preference number: 6 (lower is better)
Translates to: GVVNIADVNSTV*WLHMRDSDRCI
Trigger: AATGCATCTATCACTATCTCGCATATGCAGCCAGCAGACAGTGGAATTTACATCTGCGATGTTAACAACCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217957.10
ENST00000415430.7
ENST00000458383.1
ENST00000485533.1
CDS CAA 90 bp AGATGCATTACCTGGATCGTTGGACCCTGTAATTCGATCTTTAAATaGCCCGATGGCTACAGCTTGTCCACCTTGAGAAAAGTAAATCTC +
Preference number: 6 (lower is better)
Translates to: RCITWIVGPCNSIFK*PDGYSLSTLRKVNL
Trigger: GAGATTTACTTTTCTCAAGGTGGACAAGCTGTAGCCATCGGGCAATTTAAAGATCGAATTACAGGGTCCAACGATCCAGGTAATGCATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415430.7
ENST00000458383.1
CDS CAA 90 bp AGATGCATTACCTGGATCGTTGGACCCTGTAATTCGATCTTTAAATaGCCCGATGGCTACAGCTTGTCCACCTTGAGAAAAGTAAATCTG +
Preference number: 6 (lower is better)
Translates to: RCITWIVGPCNSIFK*PDGYSLSTLRKVNL
Trigger: CAGATTTACTTTTCTCAAGGTGGACAAGCTGTAGCCATCGGGCAATTTAAAGATCGAATTACAGGGTCCAACGATCCAGGTAATGCATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485533.1
CDS TCA 72 bp ACCGTTAAAGTTGTATGGTCAACTCACGTGAAGAAGTaGGATCGATTTCGCAGGAACTATTGCCAAGTCTGT +
Preference number: 6 (lower is better)
Translates to: TVKVVWSTHVKK*DRFRRNYCQVC
Trigger: ACAGACTTGGCAATAGTTCCTGCGAAATCGATCTCACTTCTTCACGTGAGTTGACCATACAACTTTAACGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479635.1
CDS TCA 72 bp AAGGAGAAACCGTTAAAGTTGTATGGTCAACTCACGTaGAGAAGTGAGATCGATTTCGCAGGAACTATTGCC +
Preference number: 6 (lower is better)
Translates to: KEKPLKLYGQLT*RSEIDFAGTIA
Trigger: GGCAATAGTTCCTGCGAAATCGATCTCACTTCTTCACGTGAGTTGACCATACAACTTTAACGGTTTCTCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479635.1
CDS CCA 72 bp GTTGTTAACATCGCAGATGTAAATTCCACTGTCTGCTaGCTGCATATGCGAGATAGTGATAGATGCATTACC +
Preference number: 6 (lower is better)
Translates to: VVNIADVNSTVC*LHMRDSDRCIT
Trigger: GGTAATGCATCTATCACTATCTCGCATATGCAGCCAGCAGACAGTGGAATTTACATCTGCGATGTTAACAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217957.10
ENST00000415430.7
ENST00000458383.1
ENST00000485533.1
CDS CAA 90 bp GTTGGACCCTGTAATTCGATCTTTAAATTGCCCGATGGCTACAGCTaGTCCACCTTGAGAAAAGTAAATAGAAATTGGCTCCATCTCCTT +
Preference number: 6 (lower is better)
Translates to: VGPCNSIFKLPDGYS*STLRKVNRNWLHLL
Trigger: AAGGAGATGGAGCCAATTTCTATTTACTTTTCTCAAGGTGGACAAGCTGTAGCCATCGGGCAATTTAAAGATCGAATTACAGGGTCCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217957.10
CDS CAA 90 bp AGATGCATTACCTGGATCGTTGGACCCTGTAATTCGATCTTTAAATaGCCCGATGGCTACAGCTTGTCCACCTTGAGAAAAGTAAATAGA +
Preference number: 6 (lower is better)
Translates to: RCITWIVGPCNSIFK*PDGYSLSTLRKVNR
Trigger: TCTATTTACTTTTCTCAAGGTGGACAAGCTGTAGCCATCGGGCAATTTAAAGATCGAATTACAGGGTCCAACGATCCAGGTAATGCATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217957.10
CDS CCA 72 bp TGGCTGCATATGCGAGATAGTGATAGATGCATTACCTaGATCGTTGGACCCTGTAATTCGATCTTTAAATTG +
Preference number: 6 (lower is better)
Translates to: WLHMRDSDRCIT*IVGPCNSIFKL
Trigger: CAATTTAAAGATCGAATTACAGGGTCCAACGATCCAGGTAATGCATCTATCACTATCTCGCATATGCAGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217957.10
ENST00000415430.7
ENST00000458383.1
ENST00000485533.1
CDS CAA 72 bp ATATGCGAGATAGTGATAGATGCATTACCTGGATCGTaGGACCCTGTAATTCGATCTTTAAATTGCCCGATG +
Preference number: 6 (lower is better)
Translates to: ICEIVIDALPGS*DPVIRSLNCPM
Trigger: CATCGGGCAATTTAAAGATCGAATTACAGGGTCCAACGATCCAGGTAATGCATCTATCACTATCTCGCATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217957.10
ENST00000415430.7
ENST00000458383.1
ENST00000485533.1
CDS CAA 90 bp GGAACTATTGCCAAGTCTGTTGATGGCAGTACACTGGTAATAACCTaGTTCAAAATTTGTCAGATTTCCAATGACCAAAATCCCGGTGGT +
Preference number: 6 (lower is better)
Translates to: GTIAKSVDGSTLVIT*FKICQISNDQNPGG
Trigger: ACCACCGGGATTTTGGTCATTGGAAATCTGACAAATTTTGAACAAGGTTATTACCAGTGTACTGCCATCAACAGACTTGGCAATAGTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217957.10
ENST00000415430.7
ENST00000479635.1
CDS CAA 72 bp ATCTTTAAATTGCCCGATGGCTACAGCTTGTCCACCTaGAGAAAAGTAAATAGAAATTGGCTCCATCTCCTT +
Preference number: 6 (lower is better)
Translates to: IFKLPDGYSLST*RKVNRNWLHLL
Trigger: AAGGAGATGGAGCCAATTTCTATTTACTTTTCTCAAGGTGGACAAGCTGTAGCCATCGGGCAATTTAAAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217957.10
CDS CAA 72 bp TGTAATTCGATCTTTAAATTGCCCGATGGCTACAGCTaGTCCACCTTGAGAAAAGTAAATAGAAATTGGCTC +
Preference number: 6 (lower is better)
Translates to: CNSIFKLPDGYS*STLRKVNRNWL
Trigger: GAGCCAATTTCTATTTACTTTTCTCAAGGTGGACAAGCTGTAGCCATCGGGCAATTTAAAGATCGAATTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217957.10
CDS CAA 72 bp GCCAAGTCTGTTGATGGCAGTACACTGGTAATAACCTaGTTCAAAATTTGTCAGATTTCCAATGACCAAAAT +
Preference number: 6 (lower is better)
Translates to: AKSVDGSTLVIT*FKICQISNDQN
Trigger: ATTTTGGTCATTGGAAATCTGACAAATTTTGAACAAGGTTATTACCAGTGTACTGCCATCAACAGACTTGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217957.10
ENST00000415430.7
ENST00000479635.1
CDS CAA 72 bp ATTATTATTAGTGGCAGATCTTTGCAAGGTATATGTTaGTCAGAGCTACAGTGTCACCTGGATTTACCAACA +
Preference number: 6 (lower is better)
Translates to: IIISGRSLQGIC*SELQCHLDLPT
Trigger: TGTTGGTAAATCCAGGTGACACTGTAGCTCTGACAAACATATACCTTGCAAAGATCTGCCACTAATAATAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479635.1
CDS CAA 90 bp TATAATACTATTATTATTAGTGGCAGATCTTTGCAAGGTATATGTTaGTCAGAGCTACAGTGTCACCTGGATTTACCAACAGCATCACAA +
Preference number: 6 (lower is better)
Translates to: YNTIIISGRSLQGIC*SELQCHLDLPTASQ
Trigger: TTGTGATGCTGTTGGTAAATCCAGGTGACACTGTAGCTCTGACAAACATATACCTTGCAAAGATCTGCCACTAATAATAATAGTATTATA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479635.1