RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for VPS8 (Homo sapiens)

Ensembl gene IDs: ENSG00000156931

Ensembl transcript IDs: ENST00000287546.8, ENST00000421069.5, ENST00000422105.5, ENST00000424463.4, ENST00000424721.5, ENST00000436792.6, ENST00000441141.5, ENST00000445089.5, ENST00000446204.6, ENST00000452140.5, ENST00000452666.3, ENST00000453056.5, ENST00000458721.5, ENST00000463687.1, ENST00000465213.1, ENST00000465818.5, ENST00000469713.1, ENST00000471655.1, ENST00000475580.5, ENST00000485024.1, ENST00000488255.1, ENST00000492449.5, ENST00000495190.1, ENST00000625842.3, ENST00000628962.1

Found 891 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGGTGGTGGAGGCCAAGCCCACCAGAGGCGGGGCCTCTCCCCAGCTaGCTCGGGATCATCTCTGGTTCTCCTGGGCCAGGCTCCATGGAG +
Preference number: 1 (lower is better)
Translates to: RWWRPSPPEAGPLPS*LGIISGSPGPGSME
Trigger: CTCCATGGAGCCTGGCCCAGGAGAACCAGAGATGATCCCGAGGCAGCTGGGGAGAGGCCCCGCCTCTGGTGGGCTTGGCCTCCACCACCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
3UTR CCA 90 bp GGCACAGAAGCCCAATTTGGAACCTCTTCTCAGAAGCGTGGGAGGTaGTGGAGGCCAAGCCCACCAGAGGCGGGGCCTCTCCCCAGCTGC +
Preference number: 1 (lower is better)
Translates to: GTEAQFGTSSQKRGR*WRPSPPEAGPLPSC
Trigger: GCAGCTGGGGAGAGGCCCCGCCTCTGGTGGGCTTGGCCTCCACCACCTCCCACGCTTCTGAGAAGAGGTTCCAAATTGGGCTTCTGTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
3UTR CCA 90 bp CGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTCAGAAGCGTaGGAGGTGGTGGAGGCCAAGCCCACCAGAGGCGGGGCCTCTCCC +
Preference number: 1 (lower is better)
Translates to: RSGHRSPIWNLFSEA*EVVEAKPTRGGASP
Trigger: GGGAGAGGCCCCGCCTCTGGTGGGCTTGGCCTCCACCACCTCCCACGCTTCTGAGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
3UTR CCA 90 bp ACAGAAGCCCAATTTGGAACCTCTTCTCAGAAGCGTGGGAGGTGGTaGAGGCCAAGCCCACCAGAGGCGGGGCCTCTCCCCAGCTGCCTC +
Preference number: 1 (lower is better)
Translates to: TEAQFGTSSQKRGRW*RPSPPEAGPLPSCL
Trigger: GAGGCAGCTGGGGAGAGGCCCCGCCTCTGGTGGGCTTGGCCTCCACCACCTCCCACGCTTCTGAGAAGAGGTTCCAAATTGGGCTTCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
3UTR CCA 90 bp CACTGGGAATGGTGCTGTGGACGCTCTGGGCACAGAAGCCCAATTTaGAACCTCTTCTCAGAAGCGTGGGAGGTGGTGGAGGCCAAGCCC +
Preference number: 1 (lower is better)
Translates to: HWEWCCGRSGHRSPI*NLFSEAWEVVEAKP
Trigger: GGGCTTGGCCTCCACCACCTCCCACGCTTCTGAGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACCATTCCCAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
3UTR CCA 90 bp GGAGAAGACTGGGAGTCTACACTGGGAATGGTGCTGTGGACGCTCTaGGCACAGAAGCCCAATTTGGAACCTCTTCTCAGAAGCGTGGGA +
Preference number: 1 (lower is better)
Translates to: GEDWESTLGMVLWTL*AQKPNLEPLLRSVG
Trigger: TCCCACGCTTCTGAGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACCATTCCCAGTGTAGACTCCCAGTCTTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
3UTR CCA 90 bp CGCCATGACAGCAATGTGGAGAAGACTGGGAGTCTACACTGGGAATaGTGCTGTGGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTC +
Preference number: 1 (lower is better)
Translates to: RHDSNVEKTGSLHWE*CCGRSGHRSPIWNL
Trigger: GAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACCATTCCCAGTGTAGACTCCCAGTCTTCTCCACATTGCTGTCATGGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
3UTR GCA 90 bp CATGACAGCAATGTGGAGAAGACTGGGAGTCTACACTGGGAATGGTaGTGTGGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTC +
Preference number: 1 (lower is better)
Translates to: HDSNVEKTGSLHWEW*CGRSGHRSPIWNLF
Trigger: GAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACCATTCCCAGTGTAGACTCCCAGTCTTCTCCACATTGCTGTCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
3UTR CCA 90 bp CTCTGTATTATCCAGCAGCTGGAGGAGACGGAGTATGGCAGACTCTaGAATGCCATTTGTGTGAGTTCCACCTACTTTCTAGGCTTCAGG +
Preference number: 1 (lower is better)
Translates to: LCIIQQLEETEYGRL*NAICVSSTYFLGFR
Trigger: CCTGAAGCCTAGAAAGTAGGTGGAACTCACACAAATGGCATTCCAGAGTCTGCCATACTCCGTCTCCTCCAGCTGCTGGATAATACAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
3UTR TCA 90 bp TTCAGTTATACTGCAGCCTGGCCAACCACTGTTCCCTGTAGAAGTTaGAGTTCCTCTGTATTATCCAGCAGCTGGAGGAGACGGAGTATG +
Preference number: 1 (lower is better)
Translates to: FSYTAAWPTTVPCRS*SSSVLSSSWRRRSM
Trigger: CATACTCCGTCTCCTCCAGCTGCTGGATAATACAGAGGAACTTCAACTTCTACAGGGAACAGTGGTTGGCCAGGCTGCAGTATAACTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
3UTR GCA 90 bp TATTATCCAGCAGCTGGAGGAGACGGAGTATGGCAGACTCTGGAATaGCATTTGTGTGAGTTCCACCTACTTTCTAGGCTTCAGGGTAAA +
Preference number: 1 (lower is better)
Translates to: YYPAAGGDGVWQTLE*HLCEFHLLSRLQGK
Trigger: TTTACCCTGAAGCCTAGAAAGTAGGTGGAACTCACACAAATGGCATTCCAGAGTCTGCCATACTCCGTCTCCTCCAGCTGCTGGATAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
3UTR CCA 90 bp GTTGAAGTTCCTCTGTATTATCCAGCAGCTGGAGGAGACGGAGTATaGCAGACTCTGGAATGCCATTTGTGTGAGTTCCACCTACTTTCT +
Preference number: 1 (lower is better)
Translates to: VEVPLYYPAAGGDGV*QTLECHLCEFHLLS
Trigger: AGAAAGTAGGTGGAACTCACACAAATGGCATTCCAGAGTCTGCCATACTCCGTCTCCTCCAGCTGCTGGATAATACAGAGGAACTTCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
3UTR GCA 90 bp GAGAGTACCAGCGTGCTTTCAATATCCCCTAGTTCTCTACAATACTaGAACAGAGTTCTATTTGGCAAGCCTGACAATGGAATCCAGAGC +
Preference number: 1 (lower is better)
Translates to: ESTSVLSISPSSLQY*NRVLFGKPDNGIQS
Trigger: GCTCTGGATTCCATTGTCAGGCTTGCCAAATAGAACTCTGTTGCAGTATTGTAGAGAACTAGGGGATATTGAAAGCACGCTGGTACTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424463.4
3UTR TCA 90 bp TTCCTTTGCTTAACAAGCAAAACAAAATCAATGAGTCTGGTGAACTaGCGCCATGACAGCAATGTGGAGAAGACTGGGAGTCTACACTGG +
Preference number: 1 (lower is better)
Translates to: FLCLTSKTKSMSLVN*RHDSNVEKTGSLHW
Trigger: CCAGTGTAGACTCCCAGTCTTCTCCACATTGCTGTCATGGCGTCAGTTCACCAGACTCATTGATTTTGTTTTGCTTGTTAAGCAAAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
3UTR-3UTR CCA 90 bp ACTGGGAGTCTACACTGGGAATGGTGCTGTGGACGCTCTGGGCACAGAAGCCCACAGAAGCGTGGGAGGTaGTGGAGGCCAAGCCCACCA +
Preference number: 2 (lower is better)
Translates to: TGSLHWEWCCGRSGHRSPQKRGR*WRPSPP
Trigger: TGGTGGGCTTGGCCTCCACCACCTCCCACGCTTCTG...TGGGCTTCTGTGCCCAGAGCGTCCACAGCACCATTCCCAGTGTAGACTCCCAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
3UTR-3UTR GCA 90 bp GGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTCAGAAGCGTGGGAGGGGCCTCTCCCCAGCTaGCTCGGGATCATCTCTGGT +
Preference number: 2 (lower is better)
Translates to: GRSGHRSPIWNLFSEAWEGPLPS*LGIISG
Trigger: ACCAGAGATGATCCCGAGGCAGCTGGGGAGAGGCCC...CTCCCACGCTTCTGAGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
3UTR CAA 90 bp ACACTGGGAATGGTGCTGTGGACGCTCTGGGCACAGAAGCCCAATTaGGAACCTCTTCTCAGAAGCGTGGGAGGTGGTGGAGGCCAAGCC +
Preference number: 2 (lower is better)
Translates to: TLGMVLWTLWAQKPN*EPLLRSVGGGGGQA
Trigger: GGCTTGGCCTCCACCACCTCCCACGCTTCTGAGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACCATTCCCAGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
3UTR-3UTR GCA 90 bp CAATGTGGAGAAGACTGGGAGTCTACACTGGGAATGGTGCTGTGGACGCTCTGGGGGCCTCTCCCCAGCTaGCTCGGGATCATCTCTGGT +
Preference number: 2 (lower is better)
Translates to: QCGEDWESTLGMVLWTLWGPLPS*LGIISG
Trigger: ACCAGAGATGATCCCGAGGCAGCTGGGGAGAGGCCC...CCAGAGCGTCCACAGCACCATTCCCAGTGTAGACTCCCAGTCTTCTCCACATTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
3UTR-3UTR CCA 90 bp TGGGAATGGTGCTGTGGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCCAGAAGCGTGGGAGGTaGTGGAGGCCAAGCCCACCA +
Preference number: 2 (lower is better)
Translates to: WEWCCGRSGHRSPIWNLFQKRGR*WRPSPP
Trigger: TGGTGGGCTTGGCCTCCACCACCTCCCACGCTTCTG...GAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACCATTCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
3UTR-3UTR CCA 90 bp GTGGAGAAGACTGGGAGTCTACACTGGGAATGGTGCTGTGGACGCTCTGGGCACCTCTTCTCAGAAGCGTaGGAGGTGGTGGAGGCCAAG +
Preference number: 2 (lower is better)
Translates to: VEKTGSLHWEWCCGRSGHLFSEA*EVVEAK
Trigger: CTTGGCCTCCACCACCTCCCACGCTTCTGAGAAGAG...GTGCCCAGAGCGTCCACAGCACCATTCCCAGTGTAGACTCCCAGTCTTCTCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
3UTR-3UTR CCA 90 bp CCAGCAGCTGGAGGAGACGGAGTATGGCAGACTCTGGAATGCCATTTGTGTGAGCATCTCTGGTTCTCCTaGGCCAGGCTCCATGGAGTC +
Preference number: 2 (lower is better)
Translates to: PAAGGDGVWQTLECHLCEHLWFS*ARLHGV
Trigger: GACTCCATGGAGCCTGGCCCAGGAGAACCAGAGATG...CTCACACAAATGGCATTCCAGAGTCTGCCATACTCCGTCTCCTCCAGCTGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
3UTR-3UTR GCA 90 bp TGTATTATCCAGCAGCTGGAGGAGACGGAGTATGGCAGACTCTGGAATGCCATTGGGCCTCTCCCCAGCTaGCTCGGGATCATCTCTGGT +
Preference number: 2 (lower is better)
Translates to: CIIQQLEETEYGRLWNAIGPLPS*LGIISG
Trigger: ACCAGAGATGATCCCGAGGCAGCTGGGGAGAGGCCC...AATGGCATTCCAGAGTCTGCCATACTCCGTCTCCTCCAGCTGCTGGATAATACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
3UTR-3UTR CCA 90 bp TCCAAGGCATGCTTCAGTTATACTGCAGCCTGGCCAACCACTGTTCCCTGTAGACCTCGGGATCATCTCTaGTTCTCCTGGGCCAGGCTC +
Preference number: 2 (lower is better)
Translates to: SKACFSYTAAWPTTVPCRPRDHL*FSWARL
Trigger: GAGCCTGGCCCAGGAGAACCAGAGATGATCCCGAGG...TCTACAGGGAACAGTGGTTGGCCAGGCTGCAGTATAACTGAAGCATGCCTTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
3UTR-3UTR CCA 90 bp TCCAAGGCATGCTTCAGTTATACTGCAGCCTGGCCAACCACTGTTCCCTGTAGACATCTCTGGTTCTCCTaGGCCAGGCTCCATGGAGTC +
Preference number: 2 (lower is better)
Translates to: SKACFSYTAAWPTTVPCRHLWFS*ARLHGV
Trigger: GACTCCATGGAGCCTGGCCCAGGAGAACCAGAGATG...TCTACAGGGAACAGTGGTTGGCCAGGCTGCAGTATAACTGAAGCATGCCTTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
3UTR-3UTR CCA 90 bp TGTATTATCCAGCAGCTGGAGGAGACGGAGTATGGCAGACTCTGGAATGCCATTCATCTCTGGTTCTCCTaGGCCAGGCTCCATGGAGTC +
Preference number: 2 (lower is better)
Translates to: CIIQQLEETEYGRLWNAIHLWFS*ARLHGV
Trigger: GACTCCATGGAGCCTGGCCCAGGAGAACCAGAGATG...AATGGCATTCCAGAGTCTGCCATACTCCGTCTCCTCCAGCTGCTGGATAATACA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
3UTR-3UTR CCA 90 bp CTGCAGCCTGGCCAACCACTGTTCCCTGTAGAAGTTGAAGTTCCTCTGTATTATCCTCGGGATCATCTCTaGTTCTCCTGGGCCAGGCTC +
Preference number: 2 (lower is better)
Translates to: LQPGQPLFPVEVEVPLYYPRDHL*FSWARL
Trigger: GAGCCTGGCCCAGGAGAACCAGAGATGATCCCGAGG...ATAATACAGAGGAACTTCAACTTCTACAGGGAACAGTGGTTGGCCAGGCTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
3UTR-3UTR CCA 90 bp GGTTTTAACATGAACACATTAAAGGGAGATGGCCCTGGCCCCCACAGTGTCTGCGTGCTGTGGACGCTCTaGGCACAGAAGCCCAATTTG +
Preference number: 2 (lower is better)
Translates to: GFNMNTLKGDGPGPHSVCVLWTL*AQKPNL
Trigger: CAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCAC...GCAGACACTGTGGGGGCCAGGGCCATCTCCCTTTAATGTGTTCATGTTAAAACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
3UTR-3UTR CCA 90 bp CTGCAGCCTGGCCAACCACTGTTCCCTGTAGAAGTTGAAGTTCCTCTGTATTATCTCTTCTCAGAAGCGTaGGAGGTGGTGGAGGCCAAG +
Preference number: 2 (lower is better)
Translates to: LQPGQPLFPVEVEVPLYYLFSEA*EVVEAK
Trigger: CTTGGCCTCCACCACCTCCCACGCTTCTGAGAAGAG...ATAATACAGAGGAACTTCAACTTCTACAGGGAACAGTGGTTGGCCAGGCTGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
3UTR-3UTR CCA 90 bp TATTATCCAGCAGCTGGAGGAGACGGAGTATGGCAGACTCTGGAATGCCATTTGGTGCTGTGGACGCTCTaGGCACAGAAGCCCAATTTG +
Preference number: 2 (lower is better)
Translates to: YYPAAGGDGVWQTLECHLVLWTL*AQKPNL
Trigger: CAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCAC...CAAATGGCATTCCAGAGTCTGCCATACTCCGTCTCCTCCAGCTGCTGGATAATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
3UTR-3UTR CCA 90 bp TGTATTATCCAGCAGCTGGAGGAGACGGAGTATGGCAGACTCTGGAATGCCATTAGTCTACACTGGGAATaGTGCTGTGGACGCTCTGGG +
Preference number: 2 (lower is better)
Translates to: CIIQQLEETEYGRLWNAISLHWE*CCGRSG
Trigger: CCCAGAGCGTCCACAGCACCATTCCCAGTGTAGACT...AATGGCATTCCAGAGTCTGCCATACTCCGTCTCCTCCAGCTGCTGGATAATACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
3UTR-3UTR CCA 90 bp TATTATCCAGCAGCTGGAGGAGACGGAGTATGGCAGACTCTGGAATGCCATTTGACTGGGAGTCTACACTaGGAATGGTGCTGTGGACGC +
Preference number: 2 (lower is better)
Translates to: YYPAAGGDGVWQTLECHLTGSLH*EWCCGR
Trigger: GCGTCCACAGCACCATTCCCAGTGTAGACTCCCAGT...CAAATGGCATTCCAGAGTCTGCCATACTCCGTCTCCTCCAGCTGCTGGATAATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
3UTR-3UTR TCA 90 bp GGTTTTAACATGAACACATTAAAGGGAGATGGCCCTGGCCCCCACAGTGTCTGCATGAGTCTGGTGAACTaGCGCCATGACAGCAATGTG +
Preference number: 2 (lower is better)
Translates to: GFNMNTLKGDGPGPHSVCMSLVN*RHDSNV
Trigger: CACATTGCTGTCATGGCGTCAGTTCACCAGACTCAT...GCAGACACTGTGGGGGCCAGGGCCATCTCCCTTTAATGTGTTCATGTTAAAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
3UTR-3UTR CCA 90 bp CAGTGTCTGCTCTCTCCAAGGCATGCTTCAGTTATACTGCAGCCTGGCCAACCACAATGTGGAGAAGACTaGGAGTCTACACTGGGAATG +
Preference number: 2 (lower is better)
Translates to: QCLLSPRHASVILQPGQPQCGED*ESTLGM
Trigger: CATTCCCAGTGTAGACTCCCAGTCTTCTCCACATTG...TGGTTGGCCAGGCTGCAGTATAACTGAAGCATGCCTTGGAGAGAGCAGACACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
3UTR CAA 90 bp CCAGCAGCTGGAGGAGACGGAGTATGGCAGACTCTGGAATGCCATTaGTGTGAGTTCCACCTACTTTCTAGGCTTCAGGGTAAATGGAAA +
Preference number: 2 (lower is better)
Translates to: PAAGGDGVWQTLECH*CEFHLLSRLQGKWK
Trigger: TTTCCATTTACCCTGAAGCCTAGAAAGTAGGTGGAACTCACACAAATGGCATTCCAGAGTCTGCCATACTCCGTCTCCTCCAGCTGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
3UTR-3UTR TCA 90 bp TGTATTATCCAGCAGCTGGAGGAGACGGAGTATGGCAGACTCTGGAATGCCATTATGAGTCTGGTGAACTaGCGCCATGACAGCAATGTG +
Preference number: 2 (lower is better)
Translates to: CIIQQLEETEYGRLWNAIMSLVN*RHDSNV
Trigger: CACATTGCTGTCATGGCGTCAGTTCACCAGACTCAT...AATGGCATTCCAGAGTCTGCCATACTCCGTCTCCTCCAGCTGCTGGATAATACA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
3UTR-3UTR CCA 90 bp CAACCACTGTTCCCTGTAGAAGTTGAAGTTCCTCTGTATTATCCAGCAGCTGGAGTGCTGTGGACGCTCTaGGCACAGAAGCCCAATTTG +
Preference number: 2 (lower is better)
Translates to: QPLFPVEVEVPLYYPAAGVLWTL*AQKPNL
Trigger: CAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCAC...TCCAGCTGCTGGATAATACAGAGGAACTTCAACTTCTACAGGGAACAGTGGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
3UTR-3UTR TCA 90 bp ACTTATGCTACCCAACCTAGAGCTTCCTACGAGGCATGGGGAAGAGATGAGAACTCTATTTGGCAAGCCTaGCAATGGAATCCAGAGCTG +
Preference number: 2 (lower is better)
Translates to: TYATQPRASYEAWGRDENSIWQA*QWNPEL
Trigger: CAGCTCTGGATTCCATTGTCAGGCTTGCCAAATAGA...GTTCTCATCTCTTCCCCATGCCTCGTAGGAAGCTCTAGGTTGGGTAGCATAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424463.4
3UTR-3UTR GCA 90 bp CTAGGCTTCAGGGTAAATGGAAAAAGTCGCAATAGGCGAAATGTATTTCCTAAAGGGCCTCTCCCCAGCTaGCTCGGGATCATCTCTGGT +
Preference number: 2 (lower is better)
Translates to: LGFRVNGKSRNRRNVFPKGPLPS*LGIISG
Trigger: ACCAGAGATGATCCCGAGGCAGCTGGGGAGAGGCCC...TTTAGGAAATACATTTCGCCTATTGCGACTTTTTCCATTTACCCTGAAGCCTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
3UTR-3UTR CCA 90 bp ATAGGTTTTAACATGAACACATTAAAGGGAGATGGCCCTGGCCCCCACAGTGTCGCCATGACAGCAATGTaGAGAAGACTGGGAGTCTAC +
Preference number: 2 (lower is better)
Translates to: IGFNMNTLKGDGPGPHSVAMTAM*RRLGVY
Trigger: GTAGACTCCCAGTCTTCTCCACATTGCTGTCATGGC...GACACTGTGGGGGCCAGGGCCATCTCCCTTTAATGTGTTCATGTTAAAACCTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
3UTR-3UTR CCA 90 bp GGTTTTAACATGAACACATTAAAGGGAGATGGCCCTGGCCCCCACAGTGTCTGCGAGTATGGCAGACTCTaGAATGCCATTTGTGTGAGT +
Preference number: 2 (lower is better)
Translates to: GFNMNTLKGDGPGPHSVCEYGRL*NAICVS
Trigger: ACTCACACAAATGGCATTCCAGAGTCTGCCATACTC...GCAGACACTGTGGGGGCCAGGGCCATCTCCCTTTAATGTGTTCATGTTAAAACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
3UTR-3UTR CCA 90 bp AGGGAACCAGATCTTCAGGGATGTCACCAAGGGGATAGGCACGACCTGCTAGACAAGTCTTTCATTACTTaGGGTGTGATTCCCACCAAT +
Preference number: 2 (lower is better)
Translates to: REPDLQGCHQGDRHDLLDKSFIT*GVIPTN
Trigger: ATTGGTGGGAATCACACCCCAAGTAATGAAAGACTT...GTCTAGCAGGTCGTGCCTATCCCCTTGGTGACATCCCTGAAGATCTGGTTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458721.5
3UTR-3UTR CCA 90 bp ATGTATTTCCTAAAAAGCTGGACAGAGGTATGTGACATTCCTTTGCTTAACAAGCAGAAGCGTGGGAGGTaGTGGAGGCCAAGCCCACCA +
Preference number: 2 (lower is better)
Translates to: MYFLKSWTEVCDIPLLNKQKRGR*WRPSPP
Trigger: TGGTGGGCTTGGCCTCCACCACCTCCCACGCTTCTG...CTTGTTAAGCAAAGGAATGTCACATACCTCTGTCCAGCTTTTTAGGAAATACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
3UTR-3UTR CCA 90 bp CAACCACTGTTCCCTGTAGAAGTTGAAGTTCCTCTGTATTATCCAGCAGCTGGAGCCATGACAGCAATGTaGAGAAGACTGGGAGTCTAC +
Preference number: 2 (lower is better)
Translates to: QPLFPVEVEVPLYYPAAGAMTAM*RRLGVY
Trigger: GTAGACTCCCAGTCTTCTCCACATTGCTGTCATGGC...TCCAGCTGCTGGATAATACAGAGGAACTTCAACTTCTACAGGGAACAGTGGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
3UTR-3UTR TCA 90 bp TGTTGGAGGAGTATCAACTTGAGGAATATCAAACTCCTTGTCATCAATCTGTGGGGTAGGAGGATCACTTaGGCCCAGGAGGTTGAAGCT +
Preference number: 2 (lower is better)
Translates to: CWRSINLRNIKLLVINLWGRRIT*AQEVEA
Trigger: AGCTTCAACCTCCTGGGCTCAAGTGATCCTCCTACC...CCACAGATTGATGACAAGGAGTTTGATATTCCTCAAGTTGATACTCCTCCAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424721.5
3UTR-3UTR GCA 90 bp ATGTATTTCCTAAAAAGCTGGACAGAGGTATGTGACATTCCTTTGCTTAACAAGCTACACTGGGAATGGTaGTGTGGACGCTCTGGGCAC +
Preference number: 2 (lower is better)
Translates to: MYFLKSWTEVCDIPLLNKLHWEW*CGRSGH
Trigger: GTGCCCAGAGCGTCCACAGCACCATTCCCAGTGTAG...CTTGTTAAGCAAAGGAATGTCACATACCTCTGTCCAGCTTTTTAGGAAATACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
3UTR-3UTR TCA 90 bp GAATACCCATTACTGGAAGGTGATTCAGAATCAAAAATCCCCACCACCAACAACGGCATGGGGAAGAGATaGGAACACACTTCTCTAGTT +
Preference number: 2 (lower is better)
Translates to: EYPLLEGDSESKIPTTNNGMGKR*EHTSLV
Trigger: AACTAGAGAAGTGTGTTCTCATCTCTTCCCCATGCC...GTTGTTGGTGGTGGGGATTTTTGATTCTGAATCACCTTCCAGTAATGGGTATTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000424463.4
3UTR-3UTR GCA 90 bp ACTTATGCTACCCAACCTAGAGCTTCCTACGAGGCATGGGGAAGAGATGAGAACAGTTCTCTACAATACTaGAACAGAGTTCTATTTGGC +
Preference number: 2 (lower is better)
Translates to: TYATQPRASYEAWGRDENSSLQY*NRVLFG
Trigger: GCCAAATAGAACTCTGTTGCAGTATTGTAGAGAACT...GTTCTCATCTCTTCCCCATGCCTCGTAGGAAGCTCTAGGTTGGGTAGCATAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424463.4
3UTR-3UTR TCA 90 bp TACCCATTACTGGAAGGTGATTCAGAATCAAAAATCCCCACCACCAACAACCGGAGACTGGATACTGCCTaGAAACAAAAGGGAAGATTA +
Preference number: 2 (lower is better)
Translates to: YPLLEGDSESKIPTTNNRRLDTA*KQKGRL
Trigger: TAATCTTCCCTTTTGTTTTCAGGCAGTATCCAGTCT...CCGGTTGTTGGTGGTGGGGATTTTTGATTCTGAATCACCTTCCAGTAATGGGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000424463.4
3UTR-3UTR GCA 90 bp GAATACCCATTACTGGAAGGTGATTCAGAATCAAAAATCCCCACCACCAACAACGAGAGAGTACCAGCGTaGTTTCAATATCCCCTAGTT +
Preference number: 2 (lower is better)
Translates to: EYPLLEGDSESKIPTTNNERVPA*FQYPLV
Trigger: AACTAGGGGATATTGAAAGCACGCTGGTACTCTCTC...GTTGTTGGTGGTGGGGATTTTTGATTCTGAATCACCTTCCAGTAATGGGTATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000424463.4
3UTR-3UTR CCA 90 bp TGTATTATCCAGCAGCTGGAGGAGACGGAGTATGGCAGACTCTGGAATGCCATTTATTTCCTAAAAAGCTaGACAGAGGTATGTGACATT +
Preference number: 2 (lower is better)
Translates to: CIIQQLEETEYGRLWNAIYFLKS*TEVCDI
Trigger: AATGTCACATACCTCTGTCCAGCTTTTTAGGAAATA...AATGGCATTCCAGAGTCTGCCATACTCCGTCTCCTCCAGCTGCTGGATAATACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
3UTR-3UTR TCA 90 bp TGTTTTTCCTGCATTCAGAGGAGGAGCAATGACTCTGAAAAGTTTCTCCATTGGTCATTACTTGGGGTGTaGTTCCCACCAATTTATCAC +
Preference number: 2 (lower is better)
Translates to: CFSCIQRRSNDSEKFLHWSLLGV*FPPIYH
Trigger: GTGATAAATTGGTGGGAATCACACCCCAAGTAATGA...CCAATGGAGAAACTTTTCAGAGTCATTGCTCCTCCTCTGAATGCAGGAAAAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000458721.5
3UTR-3UTR TCA 90 bp TCAAAAACCTGGTTTTTAACCAAGGGAACCAGATCTTCAGGGATGTCACCAAGGTATCCATATGTACAATaGGCGCTTCCACATTTTCCA +
Preference number: 2 (lower is better)
Translates to: SKTWFLTKGTRSSGMSPRYPYVQ*ALPHFP
Trigger: TGGAAAATGTGGAAGCGCTCATTGTACATATGGATA...CCTTGGTGACATCCCTGAAGATCTGGTTCCCTTGGTTAAAAACCAGGTTTTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000458721.5
3UTR-3UTR TCA 90 bp TCCTTTTTAAGTTGGTCCTGTCACCACTATCTGAGCTTGCCACAGATGAAGTATGGAGGAGTATCAACTTaGGGAATATCAAACTCCTTG +
Preference number: 2 (lower is better)
Translates to: SFLSWSCHHYLSLPQMKYGGVST*GISNSL
Trigger: CAAGGAGTTTGATATTCCTCAAGTTGATACTCCTCC...ATACTTCATCTGTGGCAAGCTCAGATAGTGGTGACAGGACCAACTTAAAAAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424721.5
3UTR-3UTR TCA 90 bp TCGGGAGTCATCGTCAGGACTACAAAGGAATTCAAGGACCTGATCAAAAAGTGTACCATAACATTTATCTaGCATCTACTGGGTTACAGG +
Preference number: 2 (lower is better)
Translates to: SGVIVRTTKEFKDLIKKCTITFI*HLLGYR
Trigger: CCTGTAACCCAGTAGATGTCAGATAAATGTTATGGT...ACACTTTTTGATCAGGTCCTTGAATTCCTTTGTAGTCCTGACGATGACTCCCGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452140.5
3UTR-3UTR CCA 90 bp TCCAAAGTGTTCAAAACTCACCCACTTCCTTACCAAAGACTGACTAAAAGGAATGCTTTCCATTCCTTGTaGAAGGGGAGCCAAATCACA +
Preference number: 2 (lower is better)
Translates to: SKVFKTHPLPYQRLTKRNAFHSL*KGSQIT
Trigger: TGTGATTTGGCTCCCCTTCCACAAGGAATGGAAAGC...ATTCCTTTTAGTCAGTCTTTGGTAAGGAAGTGGGTGAGTTTTGAACACTTTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000424463.4
3UTR-3UTR CCA 90 bp TCCTTTTTAAGTTGGTCCTGTCACCACTATCTGAGCTTGCCACAGATGAAGTATTATGCTTTCCAGTGTTaGAGGAGTATCAACTTGAGG +
Preference number: 2 (lower is better)
Translates to: SFLSWSCHHYLSLPQMKYYAFQC*RSINLR
Trigger: CCTCAAGTTGATACTCCTCCAACACTGGAAAGCATA...ATACTTCATCTGTGGCAAGCTCAGATAGTGGTGACAGGACCAACTTAAAAAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424721.5
3UTR CAA 90 bp ACTATTTTCCACAAAGTGATCCTATCAAATGATGCTTTCCATTCCTaGTGGAAGGGGAGCCAAATCACAGAAGAAGCAAATTTACTTGGG +
Preference number: 2 (lower is better)
Translates to: TIFHKVILSNDAFHS*WKGSQITEEANLLG
Trigger: CCCAAGTAAATTTGCTTCTTCTGTGATTTGGCTCCCCTTCCACAAGGAATGGAAAGCATCATTTGATAGGATCACTTTGTGGAAAATAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424463.4
3UTR-3UTR TCA 90 bp GCATTCAGAGGAGGAGCAATGACTCTGAAAAGTTTCTCCATTGGACTAATAAATATGAGAACTACCTGCTaGATATCTAGGCTGGTGATA +
Preference number: 2 (lower is better)
Translates to: AFRGGAMTLKSFSIGLINMRTTC*ISRLVI
Trigger: TATCACCAGCCTAGATATTCAGCAGGTAGTTCTCAT...ATTTATTAGTCCAATGGAGAAACTTTTCAGAGTCATTGCTCCTCCTCTGAATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458721.5
3UTR-3UTR TCA 90 bp AGTGTTTTTCCTGCATTCAGAGGAGGAGCAATGACTCTGAAAAGTTTCTCCATTGATTTTCCCAACACATaGGAACTACCTGCTGAATAT +
Preference number: 2 (lower is better)
Translates to: SVFPAFRGGAMTLKSFSIDFPNT*ELPAEY
Trigger: ATATTCAGCAGGTAGTTCTCATGTGTTGGGAAAATC...AATGGAGAAACTTTTCAGAGTCATTGCTCCTCCTCTGAATGCAGGAAAAACACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000458721.5
3UTR-3UTR CCA 90 bp TTCAAGGACCTGATCAAAAAGTGTTCTGTTTACAAACAAGGTGTTGTCAGGCTTTTATCTGACATCTACTaGGTTACAGGCATTGTGCTG +
Preference number: 2 (lower is better)
Translates to: FKDLIKKCSVYKQGVVRLLSDIY*VTGIVL
Trigger: CAGCACAATGCCTGTAACCCAGTAGATGTCAGATAA...AAGCCTGACAACACCTTGTTTGTAAACAGAACACTTTTTGATCAGGTCCTTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452140.5
3UTR-3UTR TCA 90 bp AGGCTGGTGATATCCATATGTACAATGAGCGCTTCCACATTTTCCATTAATTTTTCATTACTTGGGGTGTaGTTCCCACCAATTTATCAC +
Preference number: 2 (lower is better)
Translates to: RLVISICTMSASTFSINFSLLGV*FPPIYH
Trigger: GTGATAAATTGGTGGGAATCACACCCCAAGTAATGA...AAAATTAATGGAAAATGTGGAAGCGCTCATTGTACATATGGATATCACCAGCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000421069.5
ENST00000458721.5
3UTR CAA 90 bp AAGACTCATCTTCATCATCAGTCTCATTTAGTATGCTTTCCAGTGTaGGAGGAGTATCAACTTGAGGAATATCAAACTCCTTGTCATCAA +
Preference number: 2 (lower is better)
Translates to: KTHLHHQSHLVCFPV*EEYQLEEYQTPCHQ
Trigger: TTGATGACAAGGAGTTTGATATTCCTCAAGTTGATACTCCTCCAACACTGGAAAGCATACTAAATGAGACTGATGATGAAGATGAGTCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424721.5
3UTR CAA 90 bp GGCAGACAAGATGATAACCCAAGGTTCCCTTCAACTTTATTCTTTTaGTCTAGGTTTGCAGAGAGATCAATAGATATGATAGCTTATAAA +
Preference number: 2 (lower is better)
Translates to: GRQDDNPRFPSTLFF*SRFAERSIDMIAYK
Trigger: TTTATAAGCTATCATATCTATTGATCTCTCTGCAAACCTAGACAAAAAGAATAAAGTTGAAGGGAACCTTGGGTTATCATCTTGTCTGCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424463.4
3UTR CCA 72 bp GCCCAATTTGGAACCTCTTCTCAGAAGCGTGGGAGGTaGTGGAGGCCAAGCCCACCAGAGGCGGGGCCTCTC +
Preference number: 3 (lower is better)
Translates to: AQFGTSSQKRGR*WRPSPPEAGPL
Trigger: GAGAGGCCCCGCCTCTGGTGGGCTTGGCCTCCACCACCTCCCACGCTTCTGAGAAGAGGTTCCAAATTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
3UTR CCA 72 bp TGGTGCTGTGGACGCTCTGGGCACAGAAGCCCAATTTaGAACCTCTTCTCAGAAGCGTGGGAGGTGGTGGAG +
Preference number: 3 (lower is better)
Translates to: WCCGRSGHRSPI*NLFSEAWEVVE
Trigger: CTCCACCACCTCCCACGCTTCTGAGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
3UTR GCA 72 bp AATGTGGAGAAGACTGGGAGTCTACACTGGGAATGGTaGTGTGGACGCTCTGGGCACAGAAGCCCAATTTGG +
Preference number: 3 (lower is better)
Translates to: NVEKTGSLHWEW*CGRSGHRSPIW
Trigger: CCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACCATTCCCAGTGTAGACTCCCAGTCTTCTCCACATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
3UTR CCA 72 bp TGGGAGTCTACACTGGGAATGGTGCTGTGGACGCTCTaGGCACAGAAGCCCAATTTGGAACCTCTTCTCAGA +
Preference number: 3 (lower is better)
Translates to: WESTLGMVLWTL*AQKPNLEPLLR
Trigger: TCTGAGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACCATTCCCAGTGTAGACTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
3UTR CCA 72 bp AGCAATGTGGAGAAGACTGGGAGTCTACACTGGGAATaGTGCTGTGGACGCTCTGGGCACAGAAGCCCAATT +
Preference number: 3 (lower is better)
Translates to: SNVEKTGSLHWE*CCGRSGHRSPI
Trigger: AATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACCATTCCCAGTGTAGACTCCCAGTCTTCTCCACATTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
3UTR-3UTR CAA 90 bp ATCCAGCAGCTGGAGGAGACGGAGTATGGCAGACTCTGGAATGCCATTTGTGTGGCACAGAAGCCCAATTaGGAACCTCTTCTCAGAAGC +
Preference number: 3 (lower is better)
Translates to: IQQLEETEYGRLWNAICVAQKPN*EPLLRS
Trigger: GCTTCTGAGAAGAGGTTCCAAATTGGGCTTCTGTGC...CACACAAATGGCATTCCAGAGTCTGCCATACTCCGTCTCCTCCAGCTGCTGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
3UTR TCA 72 bp ACTGCAGCCTGGCCAACCACTGTTCCCTGTAGAAGTTaGAGTTCCTCTGTATTATCCAGCAGCTGGAGGAGA +
Preference number: 3 (lower is better)
Translates to: TAAWPTTVPCRS*SSSVLSSSWRR
Trigger: TCTCCTCCAGCTGCTGGATAATACAGAGGAACTTCAACTTCTACAGGGAACAGTGGTTGGCCAGGCTGCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
3UTR-3UTR CAA 90 bp TTTCAGAGTGTCGGGAGTCATCGTCAGGACTACAAAGGAATTCAAGGACCTGATAGGTGTTGTCAGGCTTaGCAAGCTGCCGAGCAAGGA +
Preference number: 3 (lower is better)
Translates to: FQSVGSHRQDYKGIQGPDRCCQA*QAAEQG
Trigger: TCCTTGCTCGGCAGCTTGCAAAGCCTGACAACACCT...ATCAGGTCCTTGAATTCCTTTGTAGTCCTGACGATGACTCCCGACACTCTGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452140.5
3UTR CCA 72 bp ATCCAGCAGCTGGAGGAGACGGAGTATGGCAGACTCTaGAATGCCATTTGTGTGAGTTCCACCTACTTTCTA +
Preference number: 3 (lower is better)
Translates to: IQQLEETEYGRL*NAICVSSTYFL
Trigger: TAGAAAGTAGGTGGAACTCACACAAATGGCATTCCAGAGTCTGCCATACTCCGTCTCCTCCAGCTGCTGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
3UTR-3UTR CAA 90 bp TCCAAGGCATGCTTCAGTTATACTGCAGCCTGGCCAACCACTGTTCCCTGTAGAACTCTGGAATGCCATTaGTGTGAGTTCCACCTACTT +
Preference number: 3 (lower is better)
Translates to: SKACFSYTAAWPTTVPCRTLECH*CEFHLL
Trigger: AAGTAGGTGGAACTCACACAAATGGCATTCCAGAGT...TCTACAGGGAACAGTGGTTGGCCAGGCTGCAGTATAACTGAAGCATGCCTTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
3UTR-3UTR CAA 90 bp TTCAGAGTGTCGGGAGTCATCGTCAGGACTACAAAGGAATTCAAGGACCTGATCTTTACAAACAAGGTGTaGTCAGGCTTTGCAAGCTGC +
Preference number: 3 (lower is better)
Translates to: FRVSGVIVRTTKEFKDLIFTNKV*SGFASC
Trigger: GCAGCTTGCAAAGCCTGACAACACCTTGTTTGTAAA...GATCAGGTCCTTGAATTCCTTTGTAGTCCTGACGATGACTCCCGACACTCTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452140.5
3UTR-3UTR CAA 90 bp GAATACCCATTACTGGAAGGTGATTCAGAATCAAAAATCCCCACCACCAACAACGATGCTTTCCATTCCTaGTGGAAGGGGAGCCAAATC +
Preference number: 3 (lower is better)
Translates to: EYPLLEGDSESKIPTTNNDAFHS*WKGSQI
Trigger: GATTTGGCTCCCCTTCCACAAGGAATGGAAAGCATC...GTTGTTGGTGGTGGGGATTTTTGATTCTGAATCACCTTCCAGTAATGGGTATTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000424463.4
3UTR GCA 72 bp AAGTGTTCTGTTTACAAACAAGGTGTTGTCAGGCTTTaGAAGCTGCCGAGCAAGGAAGGTAAAGAGACATCC +
Preference number: 3 (lower is better)
Translates to: KCSVYKQGVVRL*KLPSKEGKETS
Trigger: GGATGTCTCTTTACCTTCCTTGCTCGGCAGCTTGCAAAGCCTGACAACACCTTGTTTGTAAACAGAACACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452140.5
3UTR-3UTR CAA 90 bp TCCTTTTTAAGTTGGTCCTGTCACCACTATCTGAGCTTGCCACAGATGAAGTATGGAATATCAAACTCCTaGTCATCAATCTGTGGTCCC +
Preference number: 3 (lower is better)
Translates to: SFLSWSCHHYLSLPQMKYGISNS*SSICGP
Trigger: GGGACCACAGATTGATGACAAGGAGTTTGATATTCC...ATACTTCATCTGTGGCAAGCTCAGATAGTGGTGACAGGACCAACTTAAAAAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424721.5
3UTR-3UTR CAA 90 bp TCCTTTTTAAGTTGGTCCTGTCACCACTATCTGAGCTTGCCACAGATGAAGTATGTATGCTTTCCAGTGTaGGAGGAGTATCAACTTGAG +
Preference number: 3 (lower is better)
Translates to: SFLSWSCHHYLSLPQMKYVCFPV*EEYQLE
Trigger: CTCAAGTTGATACTCCTCCAACACTGGAAAGCATAC...ATACTTCATCTGTGGCAAGCTCAGATAGTGGTGACAGGACCAACTTAAAAAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424721.5
3UTR TCA 72 bp GGGGTAAAGTCTGAATTCTCCACCATAACATTTATCTaGCATCTACTGGGTTACAGGCATTGTGCTGGATCT +
Preference number: 3 (lower is better)
Translates to: GVKSEFSTITFI*HLLGYRHCAGS
Trigger: AGATCCAGCACAATGCCTGTAACCCAGTAGATGTCAGATAAATGTTATGGTGGAGAATTCAGACTTTACCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452140.5
3UTR GCA 72 bp AGCGTGCTTTCAATATCCCCTAGTTCTCTACAATACTaGAACAGAGTTCTATTTGGCAAGCCTGACAATGGA +
Preference number: 3 (lower is better)
Translates to: SVLSISPSSLQY*NRVLFGKPDNG
Trigger: TCCATTGTCAGGCTTGCCAAATAGAACTCTGTTGCAGTATTGTAGAGAACTAGGGGATATTGAAAGCACGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424463.4
3UTR-3UTR CAA 90 bp ATGTATTTCCTAAAAAGCTGGACAGAGGTATGTGACATTCCTTTGCTTAACAAGGCACAGAAGCCCAATTaGGAACCTCTTCTCAGAAGC +
Preference number: 3 (lower is better)
Translates to: MYFLKSWTEVCDIPLLNKAQKPN*EPLLRS
Trigger: GCTTCTGAGAAGAGGTTCCAAATTGGGCTTCTGTGC...CTTGTTAAGCAAAGGAATGTCACATACCTCTGTCCAGCTTTTTAGGAAATACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
3UTR-3UTR CAA 90 bp GAATACCCATTACTGGAAGGTGATTCAGAATCAAAAATCCCCACCACCAACAACAAGAAGCAAATTTACTaGGGCAGGGTAGTACTACAA +
Preference number: 3 (lower is better)
Translates to: EYPLLEGDSESKIPTTNNKKQIY*GRVVLQ
Trigger: TTGTAGTACTACCCTGCCCAAGTAAATTTGCTTCTT...GTTGTTGGTGGTGGGGATTTTTGATTCTGAATCACCTTCCAGTAATGGGTATTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424463.4
3UTR CCA 72 bp AAAGTCGCAATAGGCGAAATGTATTTCCTAAAAAGCTaGACAGAGGTATGTGACATTCCTTTGCTTAACAAG +
Preference number: 3 (lower is better)
Translates to: KVAIGEMYFLKS*TEVCDIPLLNK
Trigger: CTTGTTAAGCAAAGGAATGTCACATACCTCTGTCCAGCTTTTTAGGAAATACATTTCGCCTATTGCGACTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
3UTR TCA 72 bp ATTCCCTTCAAAAGTGAATGGCGCATAACTGATCCATaGAGTGAAAAAGAATCAGGTAATTTCTTCTTCCTT +
Preference number: 3 (lower is better)
Translates to: IPFKSEWRITDP*SEKESGNFFFL
Trigger: AAGGAAGAAGAAATTACCTGATTCTTTTTCACTTCATGGATCAGTTATGCGCCATTCACTTTTGAAGGGAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424721.5
CDS-3UTR CCA 90 bp GAACCTCTTCTCAGAAGCGTGGGAGGTGGTGGAGGCCAAGCCCACCAGAGGCGGCTGCCATTCCGGCCGTaGACCGCCGGCCCACGTGAC +
Preference number: 4 (lower is better)
Translates to: EPLLRSVGGGGGQAHQRRLPFRP*TAGPRD
Trigger: GTCACGTGGGCCGGCGGTCCACGGCCGGAATGGCAG...CCGCCTCTGGTGGGCTTGGCCTCCACCACCTCCCACGCTTCTGAGAAGAGGTTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000625842.3
CDS-3UTR GCA 90 bp AGGCGGGGCCTCTCCCCAGCTGCCTCGGGATCATCTCTGGTTCTCCTGGGCCAGGGGCCTCTCCCCAGCTaGCTCGGGATCATCTCTGGT +
Preference number: 4 (lower is better)
Translates to: RRGLSPAASGSSLVLLGQGPLPS*LGIISG
Trigger: ACCAGAGATGATCCCGAGGCAGCTGGGGAGAGGCCC...CTGGCCCAGGAGAACCAGAGATGATCCCGAGGCAGCTGGGGAGAGGCCCCGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp GGCGGGGCCTCTCCCCAGCTGCCTCGGGATCATCTCTGGTTCTCCTGGGCCAGGCCTCGGGATCATCTCTaGTTCTCCTGGGCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: GGASPQLPRDHLWFSWARPRDHL*FSWARL
Trigger: GAGCCTGGCCCAGGAGAACCAGAGATGATCCCGAGG...CCTGGCCCAGGAGAACCAGAGATGATCCCGAGGCAGCTGGGGAGAGGCCCCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp GGCGGGGCCTCTCCCCAGCTGCCTCGGGATCATCTCTGGTTCTCCTGGGCCAGGAAAGGGAGATGGCCCTaGCCCCCACAGTGTCTGCTC +
Preference number: 4 (lower is better)
Translates to: GGASPQLPRDHLWFSWARKGRWP*PPQCLL
Trigger: GAGCAGACACTGTGGGGGCCAGGGCCATCTCCCTTT...CCTGGCCCAGGAGAACCAGAGATGATCCCGAGGCAGCTGGGGAGAGGCCCCGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp CCAAGCCCACCAGAGGCGGGGCCTCTCCCCAGCTGCCTCGGGATCATCTCTGGTGAACTGGACAGCTTCTaGGGGGCCATCATTGCCTCC +
Preference number: 4 (lower is better)
Translates to: PSPPEAGPLPSCLGIISGELDSF*GAIIAS
Trigger: GGAGGCAATGATGGCCCCTCAGAAGCTGTCCAGTTC...ACCAGAGATGATCCCGAGGCAGCTGGGGAGAGGCCCCGCCTCTGGTGGGCTTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp GGCGGGGCCTCTCCCCAGCTGCCTCGGGATCATCTCTGGTTCTCCTGGGCCAGGAGACTGCTTCTCCTCTaGACTGTGTCCGGGAATGGA +
Preference number: 4 (lower is better)
Translates to: GGASPQLPRDHLWFSWARRLLLL*TVSGNG
Trigger: TCCATTCCCGGACACAGTGCAGAGGAGAAGCAGTCT...CCTGGCCCAGGAGAACCAGAGATGATCCCGAGGCAGCTGGGGAGAGGCCCCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp CACCAGAGGCGGGGCCTCTCCCCAGCTGCCTCGGGATCATCTCTGGTTCTCCTGGGCCCCCACAGTGTCTaGTCTCTCCAAGGCATGCTT +
Preference number: 4 (lower is better)
Translates to: HQRRGLSPAASGSSLVLLGPHSV*SLQGML
Trigger: AAGCATGCCTTGGAGAGAGCAGACACTGTGGGGGCC...CAGGAGAACCAGAGATGATCCCGAGGCAGCTGGGGAGAGGCCCCGCCTCTGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp CACCAGAGGCGGGGCCTCTCCCCAGCTGCCTCGGGATCATCTCTGGTTCTCCTGCTCTTCTCAGAAGCGTaGGAGGTGGTGGAGGCCAAG +
Preference number: 4 (lower is better)
Translates to: HQRRGLSPAASGSSLVLLLFSEA*EVVEAK
Trigger: CTTGGCCTCCACCACCTCCCACGCTTCTGAGAAGAG...CAGGAGAACCAGAGATGATCCCGAGGCAGCTGGGGAGAGGCCCCGCCTCTGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp CCAAGCCCACCAGAGGCGGGGCCTCTCCCCAGCTGCCTCGGGATCATCTCTGGTGATTCAGTCCTCTGGTaGCCGAAGCTCTCAGGTTAC +
Preference number: 4 (lower is better)
Translates to: PSPPEAGPLPSCLGIISGDSVLW*PKLSGY
Trigger: GTAACCTGAGAGCTTCGGTCACCAGAGGACTGAATC...ACCAGAGATGATCCCGAGGCAGCTGGGGAGAGGCCCCGCCTCTGGTGGGCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp CCAAGCCCACCAGAGGCGGGGCCTCTCCCCAGCTGCCTCGGGATCATCTCTGGTAGACTGCTTCTCCTCTaGACTGTGTCCGGGAATGGA +
Preference number: 4 (lower is better)
Translates to: PSPPEAGPLPSCLGIISGRLLLL*TVSGNG
Trigger: TCCATTCCCGGACACAGTGCAGAGGAGAAGCAGTCT...ACCAGAGATGATCCCGAGGCAGCTGGGGAGAGGCCCCGCCTCTGGTGGGCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp GAACCTCTTCTCAGAAGCGTGGGAGGTGGTGGAGGCCAAGCCCACCAGAGGCGGGGCCCCCACAGTGTCTaGTCTCTCCAAGGCATGCTT +
Preference number: 4 (lower is better)
Translates to: EPLLRSVGGGGGQAHQRRGPHSV*SLQGML
Trigger: AAGCATGCCTTGGAGAGAGCAGACACTGTGGGGGCC...CCGCCTCTGGTGGGCTTGGCCTCCACCACCTCCCACGCTTCTGAGAAGAGGTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp GGGAATGGTGCTGTGGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTCTGCCATTCCGGCCGTaGACCGCCGGCCCACGTGAC +
Preference number: 4 (lower is better)
Translates to: GNGAVDALGTEAQFGTSSLPFRP*TAGPRD
Trigger: GTCACGTGGGCCGGCGGTCCACGGCCGGAATGGCAG...AGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACCATTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000625842.3
CDS-3UTR CCA 90 bp GGCGGGGCCTCTCCCCAGCTGCCTCGGGATCATCTCTGGTTCTCCTGGGCCAGGACCAAAGCCAGTGCCTaGCTAACATTTCCTCCAGTG +
Preference number: 4 (lower is better)
Translates to: GGASPQLPRDHLWFSWARTKASA*LTFPPV
Trigger: CACTGGAGGAAATGTTAGCCAGGCACTGGCTTTGGT...CCTGGCCCAGGAGAACCAGAGATGATCCCGAGGCAGCTGGGGAGAGGCCCCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp CACCAGAGGCGGGGCCTCTCCCCAGCTGCCTCGGGATCATCTCTGGTTCTCCTGGTGCTGTGGACGCTCTaGGCACAGAAGCCCAATTTG +
Preference number: 4 (lower is better)
Translates to: HQRRGLSPAASGSSLVLLVLWTL*AQKPNL
Trigger: CAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCAC...CAGGAGAACCAGAGATGATCCCGAGGCAGCTGGGGAGAGGCCCCGCCTCTGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp AGGCGGGGCCTCTCCCCAGCTGCCTCGGGATCATCTCTGGTTCTCCTGGGCCAGGACCAGCTGAACTTCTaGGATCTCCACTGTCTCCAA +
Preference number: 4 (lower is better)
Translates to: RRGLSPAASGSSLVLLGQDQLNF*DLHCLQ
Trigger: TTGGAGACAGTGGAGATCTCAGAAGTTCAGCTGGTC...CTGGCCCAGGAGAACCAGAGATGATCCCGAGGCAGCTGGGGAGAGGCCCCGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp CCACCAGAGGCGGGGCCTCTCCCCAGCTGCCTCGGGATCATCTCTGGTTCTCCTGATTCAGTCCTCTGGTaGCCGAAGCTCTCAGGTTAC +
Preference number: 4 (lower is better)
Translates to: PPEAGPLPSCLGIISGSPDSVLW*PKLSGY
Trigger: GTAACCTGAGAGCTTCGGTCACCAGAGGACTGAATC...AGGAGAACCAGAGATGATCCCGAGGCAGCTGGGGAGAGGCCCCGCCTCTGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp CCCAATTTGGAACCTCTTCTCAGAAGCGTGGGAGGTGGTGGAGGCCAAGCCCACTCTGGGAGAGTTCCGTaGGGAGAGCCAGCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: PNLEPLLRSVGGGGGQAHSGRVP*GEPAWS
Trigger: GCTCCAGGCTGGCTCTCCTCACGGAACTCTCCCAGA...GTGGGCTTGGCCTCCACCACCTCCCACGCTTCTGAGAAGAGGTTCCAAATTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp ACTGGGAGTCTACACTGGGAATGGTGCTGTGGACGCTCTGGGCACAGAAGCCCATCTGGGAGAGTTCCGTaGGGAGAGCCAGCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: TGSLHWEWCCGRSGHRSPSGRVP*GEPAWS
Trigger: GCTCCAGGCTGGCTCTCCTCACGGAACTCTCCCAGA...TGGGCTTCTGTGCCCAGAGCGTCCACAGCACCATTCCCAGTGTAGACTCCCAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp CCACCAGAGGCGGGGCCTCTCCCCAGCTGCCTCGGGATCATCTCTGGTTCTCCTTCTGGAAGATGCTGTTaGAAGCAGGAGCACTCTGCG +
Preference number: 4 (lower is better)
Translates to: PPEAGPLPSCLGIISGSPSGRCC*KQEHSA
Trigger: CGCAGAGTGCTCCTGCTTTCAACAGCATCTTCCAGA...AGGAGAACCAGAGATGATCCCGAGGCAGCTGGGGAGAGGCCCCGCCTCTGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp AGGCGGGGCCTCTCCCCAGCTGCCTCGGGATCATCTCTGGTTCTCCTGGGCCAGATGAGTCTGGTGAACTaGCGCCATGACAGCAATGTG +
Preference number: 4 (lower is better)
Translates to: RRGLSPAASGSSLVLLGQMSLVN*RHDSNV
Trigger: CACATTGCTGTCATGGCGTCAGTTCACCAGACTCAT...CTGGCCCAGGAGAACCAGAGATGATCCCGAGGCAGCTGGGGAGAGGCCCCGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp GGCGGGGCCTCTCCCCAGCTGCCTCGGGATCATCTCTGGTTCTCCTGGGCCAGGATGCTTCAGTTATACTaGAGCCTGGCCAACCACTGT +
Preference number: 4 (lower is better)
Translates to: GGASPQLPRDHLWFSWARMLQLY*SLANHC
Trigger: ACAGTGGTTGGCCAGGCTGCAGTATAACTGAAGCAT...CCTGGCCCAGGAGAACCAGAGATGATCCCGAGGCAGCTGGGGAGAGGCCCCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp TGGAACCTCTTCTCAGAAGCGTGGGAGGTGGTGGAGGCCAAGCCCACCAGAGGCCATCTCTGGTTCTCCTaGGCCAGGCTCCATGGAGTC +
Preference number: 4 (lower is better)
Translates to: WNLFSEAWEVVEAKPTRGHLWFS*ARLHGV
Trigger: GACTCCATGGAGCCTGGCCCAGGAGAACCAGAGATG...GCCTCTGGTGGGCTTGGCCTCCACCACCTCCCACGCTTCTGAGAAGAGGTTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp GTGGAGAAGACTGGGAGTCTACACTGGGAATGGTGCTGTGGACGCTCTGGGCACCAGAAGCGTGGGAGGTaGTGGAGGCCAAGCCCACCA +
Preference number: 4 (lower is better)
Translates to: VEKTGSLHWEWCCGRSGHQKRGR*WRPSPP
Trigger: TGGTGGGCTTGGCCTCCACCACCTCCCACGCTTCTG...GTGCCCAGAGCGTCCACAGCACCATTCCCAGTGTAGACTCCCAGTCTTCTCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp GAACCTCTTCTCAGAAGCGTGGGAGGTGGTGGAGGCCAAGCCCACCAGAGGCGGGTGCTGTGGACGCTCTaGGCACAGAAGCCCAATTTG +
Preference number: 4 (lower is better)
Translates to: EPLLRSVGGGGGQAHQRRVLWTL*AQKPNL
Trigger: CAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCAC...CCGCCTCTGGTGGGCTTGGCCTCCACCACCTCCCACGCTTCTGAGAAGAGGTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp CCCCAGCTGCCTCGGGATCATCTCTGGTTCTCCTGGGCCAGGCTCCATGGAGTCAGTCTACACTGGGAATaGTGCTGTGGACGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: PQLPRDHLWFSWARLHGVSLHWE*CCGRSG
Trigger: CCCAGAGCGTCCACAGCACCATTCCCAGTGTAGACT...GACTCCATGGAGCCTGGCCCAGGAGAACCAGAGATGATCCCGAGGCAGCTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp CCACCAGAGGCGGGGCCTCTCCCCAGCTGCCTCGGGATCATCTCTGGTTCTCCTCTGAATGATTATCTCTaGGCTTGCTGCCATTCCGGC +
Preference number: 4 (lower is better)
Translates to: PPEAGPLPSCLGIISGSPLNDYL*ACCHSG
Trigger: GCCGGAATGGCAGCAAGCTCAGAGATAATCATTCAG...AGGAGAACCAGAGATGATCCCGAGGCAGCTGGGGAGAGGCCCCGCCTCTGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp CCACCAGAGGCGGGGCCTCTCCCCAGCTGCCTCGGGATCATCTCTGGTTCTCCTGAGATAGCGCCATACTaGCCTCCAACACTAGTGCTA +
Preference number: 4 (lower is better)
Translates to: PPEAGPLPSCLGIISGSPEIAPY*PPTLVL
Trigger: TAGCACTAGTGTTGGAGGTCAGTATGGCGCTATCTC...AGGAGAACCAGAGATGATCCCGAGGCAGCTGGGGAGAGGCCCCGCCTCTGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp CACCAGAGGCGGGGCCTCTCCCCAGCTGCCTCGGGATCATCTCTGGTTCTCCTGGCTTCAGAGTGTAGATaGGGAATGGCTGAACTGGAC +
Preference number: 4 (lower is better)
Translates to: HQRRGLSPAASGSSLVLLASECR*GMAELD
Trigger: GTCCAGTTCAGCCATTCCTCATCTACACTCTGAAGC...CAGGAGAACCAGAGATGATCCCGAGGCAGCTGGGGAGAGGCCCCGCCTCTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp AGGCGGGGCCTCTCCCCAGCTGCCTCGGGATCATCTCTGGTTCTCCTGGGCCAGGAACTCAGCTTTTTCTaGCATCCGGATGAGTCGACT +
Preference number: 4 (lower is better)
Translates to: RRGLSPAASGSSLVLLGQELSFF*HPDEST
Trigger: AGTCGACTCATCCGGATGGCAGAAAAAGCTGAGTTC...CTGGCCCAGGAGAACCAGAGATGATCCCGAGGCAGCTGGGGAGAGGCCCCGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp AGGCGGGGCCTCTCCCCAGCTGCCTCGGGATCATCTCTGGTTCTCCTGGGCCAGTTCTGCCATACAGACTaGTTCTCCTCTGCACTGTGT +
Preference number: 4 (lower is better)
Translates to: RRGLSPAASGSSLVLLGQFCHTD*FSSALC
Trigger: ACACAGTGCAGAGGAGAAGCAGTCTGTATGGCAGAA...CTGGCCCAGGAGAACCAGAGATGATCCCGAGGCAGCTGGGGAGAGGCCCCGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp TGGAACCTCTTCTCAGAAGCGTGGGAGGTGGTGGAGGCCAAGCCCACCAGAGGCGTCCAGAAAAGTGGGTaGCAACCAGCTCCGCAGCTT +
Preference number: 4 (lower is better)
Translates to: WNLFSEAWEVVEAKPTRGVQKSG*QPAPQL
Trigger: AAGCTGCGGAGCTGGTTGCCACCCACTTTTCTGGAC...GCCTCTGGTGGGCTTGGCCTCCACCACCTCCCACGCTTCTGAGAAGAGGTTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp GTGGAGAAGACTGGGAGTCTACACTGGGAATGGTGCTGTGGACGCTCTGGGCACAAAGGGAGATGGCCCTaGCCCCCACAGTGTCTGCTC +
Preference number: 4 (lower is better)
Translates to: VEKTGSLHWEWCCGRSGHKGRWP*PPQCLL
Trigger: GAGCAGACACTGTGGGGGCCAGGGCCATCTCCCTTT...GTGCCCAGAGCGTCCACAGCACCATTCCCAGTGTAGACTCCCAGTCTTCTCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp ACTGGGAGTCTACACTGGGAATGGTGCTGTGGACGCTCTGGGCACAGAAGCCCAAAAGGGAGATGGCCCTaGCCCCCACAGTGTCTGCTC +
Preference number: 4 (lower is better)
Translates to: TGSLHWEWCCGRSGHRSPKGRWP*PPQCLL
Trigger: GAGCAGACACTGTGGGGGCCAGGGCCATCTCCCTTT...TGGGCTTCTGTGCCCAGAGCGTCCACAGCACCATTCCCAGTGTAGACTCCCAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp GAACCTCTTCTCAGAAGCGTGGGAGGTGGTGGAGGCCAAGCCCACCAGAGGCGGCTGAATGATTATCTCTaGGCTTGCTGCCATTCCGGC +
Preference number: 4 (lower is better)
Translates to: EPLLRSVGGGGGQAHQRRLNDYL*ACCHSG
Trigger: GCCGGAATGGCAGCAAGCTCAGAGATAATCATTCAG...CCGCCTCTGGTGGGCTTGGCCTCCACCACCTCCCACGCTTCTGAGAAGAGGTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp GGCGGGGCCTCTCCCCAGCTGCCTCGGGATCATCTCTGGTTCTCCTGGGCCAGGGGAGGAGTATCAACTTaGGGAATATCAAACTCCTTG +
Preference number: 4 (lower is better)
Translates to: GGASPQLPRDHLWFSWARGGVST*GISNSL
Trigger: CAAGGAGTTTGATATTCCTCAAGTTGATACTCCTCC...CCTGGCCCAGGAGAACCAGAGATGATCCCGAGGCAGCTGGGGAGAGGCCCCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp GAACCTCTTCTCAGAAGCGTGGGAGGTGGTGGAGGCCAAGCCCACCAGAGGCGGCGACTCTCTTCAAATTaGACTATGCCTCCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: EPLLRSVGGGGGQAHQRRRLSSN*TMPPAC
Trigger: GCAGGCTGGAGGCATAGTTCAATTTGAAGAGAGTCG...CCGCCTCTGGTGGGCTTGGCCTCCACCACCTCCCACGCTTCTGAGAAGAGGTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp GGAGAAGACTGGGAGTCTACACTGGGAATGGTGCTGTGGACGCTCTGGGCACAGGAACTGGACAGCTTCTaGGGGGCCATCATTGCCTCC +
Preference number: 4 (lower is better)
Translates to: GEDWESTLGMVLWTLWAQELDSF*GAIIAS
Trigger: GGAGGCAATGATGGCCCCTCAGAAGCTGTCCAGTTC...CTGTGCCCAGAGCGTCCACAGCACCATTCCCAGTGTAGACTCCCAGTCTTCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp GGAGAAGACTGGGAGTCTACACTGGGAATGGTGCTGTGGACGCTCTGGGCACAGCACTCTGCGAGCCACTaGATGGCCTATAGCTCTCGC +
Preference number: 4 (lower is better)
Translates to: GEDWESTLGMVLWTLWAQHSASH*MAYSSR
Trigger: GCGAGAGCTATAGGCCATTCAGTGGCTCGCAGAGTG...CTGTGCCCAGAGCGTCCACAGCACCATTCCCAGTGTAGACTCCCAGTCTTCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp AGGCGGGGCCTCTCCCCAGCTGCCTCGGGATCATCTCTGGTTCTCCTGGGCCAGATGAGATGTACCCACTaGTATCAGACTGGATACTGC +
Preference number: 4 (lower is better)
Translates to: RRGLSPAASGSSLVLLGQMRCTH*YQTGYC
Trigger: GCAGTATCCAGTCTGATAGCAGTGGGTACATCTCAT...CTGGCCCAGGAGAACCAGAGATGATCCCGAGGCAGCTGGGGAGAGGCCCCGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp CCAAGCCCACCAGAGGCGGGGCCTCTCCCCAGCTGCCTCGGGATCATCTCTGGTATGAGATGTACCCACTaGTATCAGACTGGATACTGC +
Preference number: 4 (lower is better)
Translates to: PSPPEAGPLPSCLGIISGMRCTH*YQTGYC
Trigger: GCAGTATCCAGTCTGATAGCAGTGGGTACATCTCAT...ACCAGAGATGATCCCGAGGCAGCTGGGGAGAGGCCCCGCCTCTGGTGGGCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp GGCGGGGCCTCTCCCCAGCTGCCTCGGGATCATCTCTGGTTCTCCTGGGCCAGGCTTGATATGCAATATTaGTGTTCCTGGAGGATGAGC +
Preference number: 4 (lower is better)
Translates to: GGASPQLPRDHLWFSWARLDMQY*CSWRMS
Trigger: GCTCATCCTCCAGGAACAGCAATATTGCATATCAAG...CCTGGCCCAGGAGAACCAGAGATGATCCCGAGGCAGCTGGGGAGAGGCCCCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp AGGCGGGGCCTCTCCCCAGCTGCCTCGGGATCATCTCTGGTTCTCCTGGGCCAGAACTCAGGCTTAGAATaGAGAGGCTCAATACAGCAG +
Preference number: 4 (lower is better)
Translates to: RRGLSPAASGSSLVLLGQNSGLE*RGSIQQ
Trigger: CTGCTGTATTGAGCCTCTGCATTCTAAGCCTGAGTT...CTGGCCCAGGAGAACCAGAGATGATCCCGAGGCAGCTGGGGAGAGGCCCCGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp GAACCTCTTCTCAGAAGCGTGGGAGGTGGTGGAGGCCAAGCCCACCAGAGGCGGTCAGGCTTTGCAAGCTaGCGAGCAAGGAAGGTAAAG +
Preference number: 4 (lower is better)
Translates to: EPLLRSVGGGGGQAHQRRSGFAS*RARKVK
Trigger: CTTTACCTTCCTTGCTCGGCAGCTTGCAAAGCCTGA...CCGCCTCTGGTGGGCTTGGCCTCCACCACCTCCCACGCTTCTGAGAAGAGGTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp GGCGGGGCCTCTCCCCAGCTGCCTCGGGATCATCTCTGGTTCTCCTGGGCCAGGCTTCAAATTGAACTATaGCTCCAGCCTGCAGCAATT +
Preference number: 4 (lower is better)
Translates to: GGASPQLPRDHLWFSWARLQIEL*LQPAAI
Trigger: AATTGCTGCAGGCTGGAGGCATAGTTCAATTTGAAG...CCTGGCCCAGGAGAACCAGAGATGATCCCGAGGCAGCTGGGGAGAGGCCCCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp CACCAGAGGCGGGGCCTCTCCCCAGCTGCCTCGGGATCATCTCTGGTTCTCCTGGAACTCAGCTTTTTCTaGCATCCGGATGAGTCGACT +
Preference number: 4 (lower is better)
Translates to: HQRRGLSPAASGSSLVLLELSFF*HPDEST
Trigger: AGTCGACTCATCCGGATGGCAGAAAAAGCTGAGTTC...CAGGAGAACCAGAGATGATCCCGAGGCAGCTGGGGAGAGGCCCCGCCTCTGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp TGGAACCTCTTCTCAGAAGCGTGGGAGGTGGTGGAGGCCAAGCCCACCAGAGGCAAAGCAGGAGCACTCTaGGAGCCACTGAATGGCCTA +
Preference number: 4 (lower is better)
Translates to: WNLFSEAWEVVEAKPTRGKAGAL*EPLNGL
Trigger: TAGGCCATTCAGTGGCTCGCAGAGTGCTCCTGCTTT...GCCTCTGGTGGGCTTGGCCTCCACCACCTCCCACGCTTCTGAGAAGAGGTTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp CCACCAGAGGCGGGGCCTCTCCCCAGCTGCCTCGGGATCATCTCTGGTTCTCCTATGCTTCAGTTATACTaGAGCCTGGCCAACCACTGT +
Preference number: 4 (lower is better)
Translates to: PPEAGPLPSCLGIISGSPMLQLY*SLANHC
Trigger: ACAGTGGTTGGCCAGGCTGCAGTATAACTGAAGCAT...AGGAGAACCAGAGATGATCCCGAGGCAGCTGGGGAGAGGCCCCGCCTCTGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp ACTGGGAGTCTACACTGGGAATGGTGCTGTGGACGCTCTGGGCACAGAAGCCCACCAGCAGTGGCACACTaGAAGGATCCATCCGGCCAT +
Preference number: 4 (lower is better)
Translates to: TGSLHWEWCCGRSGHRSPPAVAH*KDPSGH
Trigger: ATGGCCGGATGGATCCTTCCAGTGTGCCACTGCTGG...TGGGCTTCTGTGCCCAGAGCGTCCACAGCACCATTCCCAGTGTAGACTCCCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp GGAGAAGACTGGGAGTCTACACTGGGAATGGTGCTGTGGACGCTCTGGGCACAGGTGCCAGGCCAGCAGTaGCACACTGGAAGGATCCAT +
Preference number: 4 (lower is better)
Translates to: GEDWESTLGMVLWTLWAQVPGQQ*HTGRIH
Trigger: ATGGATCCTTCCAGTGTGCCACTGCTGGCCTGGCAC...CTGTGCCCAGAGCGTCCACAGCACCATTCCCAGTGTAGACTCCCAGTCTTCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp GAACCTCTTCTCAGAAGCGTGGGAGGTGGTGGAGGCCAAGCCCACCAGAGGCGGACCAAAGCCAGTGCCTaGCTAACATTTCCTCCAGTG +
Preference number: 4 (lower is better)
Translates to: EPLLRSVGGGGGQAHQRRTKASA*LTFPPV
Trigger: CACTGGAGGAAATGTTAGCCAGGCACTGGCTTTGGT...CCGCCTCTGGTGGGCTTGGCCTCCACCACCTCCCACGCTTCTGAGAAGAGGTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp CCACCAGAGGCGGGGCCTCTCCCCAGCTGCCTCGGGATCATCTCTGGTTCTCCTTCATCAGCCATTTCTTaGCGTCTCTTGTACTGCTGC +
Preference number: 4 (lower is better)
Translates to: PPEAGPLPSCLGIISGSPSSAIS*RLLYCC
Trigger: GCAGCAGTACAAGAGACGCCAAGAAATGGCTGATGA...AGGAGAACCAGAGATGATCCCGAGGCAGCTGGGGAGAGGCCCCGCCTCTGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp CCAAGCCCACCAGAGGCGGGGCCTCTCCCCAGCTGCCTCGGGATCATCTCTGGTCATGTCCATCTTGTTTaGCCCTCAAATTCCACAGTG +
Preference number: 4 (lower is better)
Translates to: PSPPEAGPLPSCLGIISGHVHLV*PSNSTV
Trigger: CACTGTGGAATTTGAGGGCCAAACAAGATGGACATG...ACCAGAGATGATCCCGAGGCAGCTGGGGAGAGGCCCCGCCTCTGGTGGGCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp TGGAACCTCTTCTCAGAAGCGTGGGAGGTGGTGGAGGCCAAGCCCACCAGAGGCGAGATAGCGCCATACTaGCCTCCAACACTAGTGCTA +
Preference number: 4 (lower is better)
Translates to: WNLFSEAWEVVEAKPTRGEIAPY*PPTLVL
Trigger: TAGCACTAGTGTTGGAGGTCAGTATGGCGCTATCTC...GCCTCTGGTGGGCTTGGCCTCCACCACCTCCCACGCTTCTGAGAAGAGGTTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp AGGCGGGGCCTCTCCCCAGCTGCCTCGGGATCATCTCTGGTTCTCCTGGGCCAGAACTGTGTGATGGGATaGTCTTTCAACTCAGGCTTA +
Preference number: 4 (lower is better)
Translates to: RRGLSPAASGSSLVLLGQNCVMG*SFNSGL
Trigger: TAAGCCTGAGTTGAAAGATCATCCCATCACACAGTT...CTGGCCCAGGAGAACCAGAGATGATCCCGAGGCAGCTGGGGAGAGGCCCCGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp CCCCAGCTGCCTCGGGATCATCTCTGGTTCTCCTGGGCCAGGCTCCATGGAGTCTGGGTTGGGTTGAACTaGCACAACAGCTCAATGAAC +
Preference number: 4 (lower is better)
Translates to: PQLPRDHLWFSWARLHGVWVGLN*HNSSMN
Trigger: GTTCATTGAGCTGTTGTGTCAGTTCAACCCAACCCA...GACTCCATGGAGCCTGGCCCAGGAGAACCAGAGATGATCCCGAGGCAGCTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp GGCGGGGCCTCTCCCCAGCTGCCTCGGGATCATCTCTGGTTCTCCTGGGCCAGGATTAGGAAGGCACCATaGATATCTCCTTTCTTTTCC +
Preference number: 4 (lower is better)
Translates to: GGASPQLPRDHLWFSWARIRKAP*ISPFFS
Trigger: GGAAAAGAAAGGAGATATTCATGGTGCCTTCCTAAT...CCTGGCCCAGGAGAACCAGAGATGATCCCGAGGCAGCTGGGGAGAGGCCCCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp CCACCAGAGGCGGGGCCTCTCCCCAGCTGCCTCGGGATCATCTCTGGTTCTCCTTGTAGGCAGAATGAGTaGTACAAATGGCCACAGCTA +
Preference number: 4 (lower is better)
Translates to: PPEAGPLPSCLGIISGSPCRQNE*YKWPQL
Trigger: TAGCTGTGGCCATTTGTATCACTCATTCTGCCTACA...AGGAGAACCAGAGATGATCCCGAGGCAGCTGGGGAGAGGCCCCGCCTCTGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp CCAAGCCCACCAGAGGCGGGGCCTCTCCCCAGCTGCCTCGGGATCATCTCTGGTAGACATTTTTACCTGTaGTGGGGTTATCCTTCCCTT +
Preference number: 4 (lower is better)
Translates to: PSPPEAGPLPSCLGIISGRHFYL*WGYPSL
Trigger: AAGGGAAGGATAACCCCATCACAGGTAAAAATGTCT...ACCAGAGATGATCCCGAGGCAGCTGGGGAGAGGCCCCGCCTCTGGTGGGCTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp CCAAGCCCACCAGAGGCGGGGCCTCTCCCCAGCTGCCTCGGGATCATCTCTGGTGTTCCCTGTAGAAGTTaGAGTTCCTCTGTATTATCC +
Preference number: 4 (lower is better)
Translates to: PSPPEAGPLPSCLGIISGVPCRS*SSSVLS
Trigger: GGATAATACAGAGGAACTTCAACTTCTACAGGGAAC...ACCAGAGATGATCCCGAGGCAGCTGGGGAGAGGCCCCGCCTCTGGTGGGCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp TCCAAGGCATGCTTCAGTTATACTGCAGCCTGGCCAACCACTGTTCCCTGTAGACGTGACCGCACCCACTaGTCTAGCCTCACGCACGCG +
Preference number: 4 (lower is better)
Translates to: SKACFSYTAAWPTTVPCRRDRTH*SSLTHA
Trigger: CGCGTGCGTGAGGCTAGAGCAGTGGGTGCGGTCACG...TCTACAGGGAACAGTGGTTGGCCAGGCTGCAGTATAACTGAAGCATGCCTTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287546.8
CDS-3UTR GCA 90 bp AGGCGGGGCCTCTCCCCAGCTGCCTCGGGATCATCTCTGGTTCTCCTGGGCCAGCTTGATATGCAATATTaGTGTTCCTGGAGGATGAGC +
Preference number: 4 (lower is better)
Translates to: RRGLSPAASGSSLVLLGQLDMQY*CSWRMS
Trigger: GCTCATCCTCCAGGAACAGCAATATTGCATATCAAG...CTGGCCCAGGAGAACCAGAGATGATCCCGAGGCAGCTGGGGAGAGGCCCCGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp CACCAGAGGCGGGGCCTCTCCCCAGCTGCCTCGGGATCATCTCTGGTTCTCCTGTGCCGATCAATCACATaGAACTTCTCTACGCTGTCT +
Preference number: 4 (lower is better)
Translates to: HQRRGLSPAASGSSLVLLCRSIT*NFSTLS
Trigger: AGACAGCGTAGAGAAGTTGCATGTGATTGATCGGCA...CAGGAGAACCAGAGATGATCCCGAGGCAGCTGGGGAGAGGCCCCGCCTCTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp TGGAACCTCTTCTCAGAAGCGTGGGAGGTGGTGGAGGCCAAGCCCACCAGAGGCTCAGGCTTTGCAAGCTaGCGAGCAAGGAAGGTAAAG +
Preference number: 4 (lower is better)
Translates to: WNLFSEAWEVVEAKPTRGSGFAS*RARKVK
Trigger: CTTTACCTTCCTTGCTCGGCAGCTTGCAAAGCCTGA...GCCTCTGGTGGGCTTGGCCTCCACCACCTCCCACGCTTCTGAGAAGAGGTTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp CTCTCTCCAAGGCATGCTTCAGTTATACTGCAGCCTGGCCAACCACTGTTCCCTGGGCCTCTCCCCAGCTaGCTCGGGATCATCTCTGGT +
Preference number: 4 (lower is better)
Translates to: LSPRHASVILQPGQPLFPGPLPS*LGIISG
Trigger: ACCAGAGATGATCCCGAGGCAGCTGGGGAGAGGCCC...AGGGAACAGTGGTTGGCCAGGCTGCAGTATAACTGAAGCATGCCTTGGAGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp GGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTCAGAAGCGTGGGAGCTACACTGGGAATGGTaGTGTGGACGCTCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: GRSGHRSPIWNLFSEAWELHWEW*CGRSGH
Trigger: GTGCCCAGAGCGTCCACAGCACCATTCCCAGTGTAG...CTCCCACGCTTCTGAGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp GGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTCAGAAGCGTGGGAGGGCCCCCACAGTGTCTaGTCTCTCCAAGGCATGCTT +
Preference number: 4 (lower is better)
Translates to: GRSGHRSPIWNLFSEAWEGPHSV*SLQGML
Trigger: AAGCATGCCTTGGAGAGAGCAGACACTGTGGGGGCC...CTCCCACGCTTCTGAGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp GCACAGAAGCCCAATTTGGAACCTCTTCTCAGAAGCGTGGGAGGTGGTGGAGGCGGCCCCCACAGTGTCTaGTCTCTCCAAGGCATGCTT +
Preference number: 4 (lower is better)
Translates to: AQKPNLEPLLRSVGGGGGGPHSV*SLQGML
Trigger: AAGCATGCCTTGGAGAGAGCAGACACTGTGGGGGCC...GCCTCCACCACCTCCCACGCTTCTGAGAAGAGGTTCCAAATTGGGCTTCTGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp CACCAGAGGCGGGGCCTCTCCCCAGCTGCCTCGGGATCATCTCTGGTTCTCCTGTTTGCTTTTCCTTCATaGAAAGACCACGCAAGAGCC +
Preference number: 4 (lower is better)
Translates to: HQRRGLSPAASGSSLVLLFAFPS*KDHARA
Trigger: GGCTCTTGCGTGGTCTTTCCATGAAGGAAAAGCAAA...CAGGAGAACCAGAGATGATCCCGAGGCAGCTGGGGAGAGGCCCCGCCTCTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp GGCGGGGCCTCTCCCCAGCTGCCTCGGGATCATCTCTGGTTCTCCTGGGCCAGGACTTGGATTTTTCCTTaGTCTGGGCACTTTTTCAGA +
Preference number: 4 (lower is better)
Translates to: GGASPQLPRDHLWFSWARTWIFP*SGHFFR
Trigger: TCTGAAAAAGTGCCCAGACCAAGGAAAAATCCAAGT...CCTGGCCCAGGAGAACCAGAGATGATCCCGAGGCAGCTGGGGAGAGGCCCCGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp GGCGGGGCCTCTCCCCAGCTGCCTCGGGATCATCTCTGGTTCTCCTGGGCCAGGGCCTCACGTTGCTGCTaGTTCAAATTATGTGAATTT +
Preference number: 4 (lower is better)
Translates to: GGASPQLPRDHLWFSWARASRCC*FKLCEF
Trigger: AAATTCACATAATTTGAACCAGCAGCAACGTGAGGC...CCTGGCCCAGGAGAACCAGAGATGATCCCGAGGCAGCTGGGGAGAGGCCCCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp CACCAGAGGCGGGGCCTCTCCCCAGCTGCCTCGGGATCATCTCTGGTTCTCCTGCATGTCCATCTTGTTTaGCCCTCAAATTCCACAGTG +
Preference number: 4 (lower is better)
Translates to: HQRRGLSPAASGSSLVLLHVHLV*PSNSTV
Trigger: CACTGTGGAATTTGAGGGCCAAACAAGATGGACATG...CAGGAGAACCAGAGATGATCCCGAGGCAGCTGGGGAGAGGCCCCGCCTCTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp TGGAACCTCTTCTCAGAAGCGTGGGAGGTGGTGGAGGCCAAGCCCACCAGAGGCCAGTGGGATCCCCTTTaGACTGATGATACGATGGAG +
Preference number: 4 (lower is better)
Translates to: WNLFSEAWEVVEAKPTRGQWDPL*TDDTME
Trigger: CTCCATCGTATCATCAGTCCAAAGGGGATCCCACTG...GCCTCTGGTGGGCTTGGCCTCCACCACCTCCCACGCTTCTGAGAAGAGGTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp CCCAATTTGGAACCTCTTCTCAGAAGCGTGGGAGGTGGTGGAGGCCAAGCCCACTCGCTGCTGCGATTCTaGGAGAGTTCCGTGAGGAGA +
Preference number: 4 (lower is better)
Translates to: PNLEPLLRSVGGGGGQAHSLLRF*ESSVRR
Trigger: TCTCCTCACGGAACTCTCCCAGAATCGCAGCAGCGA...GTGGGCTTGGCCTCCACCACCTCCCACGCTTCTGAGAAGAGGTTCCAAATTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp ACAGCAATGTGGAGAAGACTGGGAGTCTACACTGGGAATGGTGCTGTGGACGCTCAGAAGCGTGGGAGGTaGTGGAGGCCAAGCCCACCA +
Preference number: 4 (lower is better)
Translates to: TAMWRRLGVYTGNGAVDAQKRGR*WRPSPP
Trigger: TGGTGGGCTTGGCCTCCACCACCTCCCACGCTTCTG...AGCGTCCACAGCACCATTCCCAGTGTAGACTCCCAGTCTTCTCCACATTGCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp GGAGAAGACTGGGAGTCTACACTGGGAATGGTGCTGTGGACGCTCTGGGCACAGACTGGGAGTCTACACTaGGAATGGTGCTGTGGACGC +
Preference number: 4 (lower is better)
Translates to: GEDWESTLGMVLWTLWAQTGSLH*EWCCGR
Trigger: GCGTCCACAGCACCATTCCCAGTGTAGACTCCCAGT...CTGTGCCCAGAGCGTCCACAGCACCATTCCCAGTGTAGACTCCCAGTCTTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp CCCCAGCTGCCTCGGGATCATCTCTGGTTCTCCTGGGCCAGGCTCCATGGAGTCGCTGTTCCTGGAGGATaGGCATCTGTTATTGATCTT +
Preference number: 4 (lower is better)
Translates to: PQLPRDHLWFSWARLHGVAVPGG*ASVIDL
Trigger: AAGATCAATAACAGATGCTCATCCTCCAGGAACAGC...GACTCCATGGAGCCTGGCCCAGGAGAACCAGAGATGATCCCGAGGCAGCTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp GGCGGGGCCTCTCCCCAGCTGCCTCGGGATCATCTCTGGTTCTCCTGGGCCAGGATGGTTTCAATCCAATaGCCAGTATTTTTGTCAAGG +
Preference number: 4 (lower is better)
Translates to: GGASPQLPRDHLWFSWARMVSIQ*PVFLSR
Trigger: CCTTGACAAAAATACTGGTCATTGGATTGAAACCAT...CCTGGCCCAGGAGAACCAGAGATGATCCCGAGGCAGCTGGGGAGAGGCCCCGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp AGGCGGGGCCTCTCCCCAGCTGCCTCGGGATCATCTCTGGTTCTCCTGGGCCAGTATCCATATGTACAATaGGCGCTTCCACATTTTCCA +
Preference number: 4 (lower is better)
Translates to: RRGLSPAASGSSLVLLGQYPYVQ*ALPHFP
Trigger: TGGAAAATGTGGAAGCGCTCATTGTACATATGGATA...CTGGCCCAGGAGAACCAGAGATGATCCCGAGGCAGCTGGGGAGAGGCCCCGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000625842.3
CDS-3UTR TCA 90 bp AGGCGGGGCCTCTCCCCAGCTGCCTCGGGATCATCTCTGGTTCTCCTGGGCCAGGATTTTCCCAACACATaGGAACTACCTGCTGAATAT +
Preference number: 4 (lower is better)
Translates to: RRGLSPAASGSSLVLLGQDFPNT*ELPAEY
Trigger: ATATTCAGCAGGTAGTTCTCATGTGTTGGGAAAATC...CTGGCCCAGGAGAACCAGAGATGATCCCGAGGCAGCTGGGGAGAGGCCCCGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000625842.3
CDS-3UTR TCA 90 bp CCCCAGCTGCCTCGGGATCATCTCTGGTTCTCCTGGGCCAGGCTCCATGGAGTCATCCAGAACAGGTTCTaGGGTTCCCTTTTTAGCAGT +
Preference number: 4 (lower is better)
Translates to: PQLPRDHLWFSWARLHGVIQNRF*GSLFSS
Trigger: ACTGCTAAAAAGGGAACCTCAGAACCTGTTCTGGAT...GACTCCATGGAGCCTGGCCCAGGAGAACCAGAGATGATCCCGAGGCAGCTGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp GGTTTTAACATGAACACATTAAAGGGAGATGGCCCTGGCCCCCACAGTGTCTGCTCTGGGAGAGTTCCGTaGGGAGAGCCAGCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: GFNMNTLKGDGPGPHSVCSGRVP*GEPAWS
Trigger: GCTCCAGGCTGGCTCTCCTCACGGAACTCTCCCAGA...GCAGACACTGTGGGGGCCAGGGCCATCTCCCTTTAATGTGTTCATGTTAAAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp GGTGCTGTGGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTCAGAAGCACTCTGCGAGCCACTaGATGGCCTATAGCTCTCGC +
Preference number: 4 (lower is better)
Translates to: GAVDALGTEAQFGTSSQKHSASH*MAYSSR
Trigger: GCGAGAGCTATAGGCCATTCAGTGGCTCGCAGAGTG...CTTCTGAGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp ACTGGGAGTCTACACTGGGAATGGTGCTGTGGACGCTCTGGGCACAGAAGCCCATCTGGAAGATGCTGTTaGAAGCAGGAGCACTCTGCG +
Preference number: 4 (lower is better)
Translates to: TGSLHWEWCCGRSGHRSPSGRCC*KQEHSA
Trigger: CGCAGAGTGCTCCTGCTTTCAACAGCATCTTCCAGA...TGGGCTTCTGTGCCCAGAGCGTCCACAGCACCATTCCCAGTGTAGACTCCCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp GAACCTCTTCTCAGAAGCGTGGGAGGTGGTGGAGGCCAAGCCCACCAGAGGCGGATCTACTTTGTCAGCTaGAGACACTATCTGGGCAGA +
Preference number: 4 (lower is better)
Translates to: EPLLRSVGGGGGQAHQRRIYFVS*RHYLGR
Trigger: TCTGCCCAGATAGTGTCTGCAGCTGACAAAGTAGAT...CCGCCTCTGGTGGGCTTGGCCTCCACCACCTCCCACGCTTCTGAGAAGAGGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp CCCCAGCTGCCTCGGGATCATCTCTGGTTCTCCTGGGCCAGGCTCCATGGAGTCATGAGATGTACCCACTaGTATCAGACTGGATACTGC +
Preference number: 4 (lower is better)
Translates to: PQLPRDHLWFSWARLHGVMRCTH*YQTGYC
Trigger: GCAGTATCCAGTCTGATAGCAGTGGGTACATCTCAT...GACTCCATGGAGCCTGGCCCAGGAGAACCAGAGATGATCCCGAGGCAGCTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp GAACCTCTTCTCAGAAGCGTGGGAGGTGGTGGAGGCCAAGCCCACCAGAGGCGGAACTCAGGCTTAGAATaGAGAGGCTCAATACAGCAG +
Preference number: 4 (lower is better)
Translates to: EPLLRSVGGGGGQAHQRRNSGLE*RGSIQQ
Trigger: CTGCTGTATTGAGCCTCTGCATTCTAAGCCTGAGTT...CCGCCTCTGGTGGGCTTGGCCTCCACCACCTCCCACGCTTCTGAGAAGAGGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp GAACCTCTTCTCAGAAGCGTGGGAGGTGGTGGAGGCCAAGCCCACCAGAGGCGGCACGTAATTTTGTACTaGTACAAAGTGCCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: EPLLRSVGGGGGQAHQRRHVILY*YKVPGQ
Trigger: CTGGCCTGGCACTTTGTAGCAGTACAAAATTACGTG...CCGCCTCTGGTGGGCTTGGCCTCCACCACCTCCCACGCTTCTGAGAAGAGGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp CCCCAGCTGCCTCGGGATCATCTCTGGTTCTCCTGGGCCAGGCTCCATGGAGTCTGCCGATCAATCACATaGAACTTCTCTACGCTGTCT +
Preference number: 4 (lower is better)
Translates to: PQLPRDHLWFSWARLHGVCRSIT*NFSTLS
Trigger: AGACAGCGTAGAGAAGTTGCATGTGATTGATCGGCA...GACTCCATGGAGCCTGGCCCAGGAGAACCAGAGATGATCCCGAGGCAGCTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp ACTGGGAGTCTACACTGGGAATGGTGCTGTGGACGCTCTGGGCACAGAAGCCCAGGTGTTGTCAGGCTTTaGAAGCTGCCGAGCAAGGAA +
Preference number: 4 (lower is better)
Translates to: TGSLHWEWCCGRSGHRSPGVVRL*KLPSKE
Trigger: TTCCTTGCTCGGCAGCTTGCAAAGCCTGACAACACC...TGGGCTTCTGTGCCCAGAGCGTCCACAGCACCATTCCCAGTGTAGACTCCCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp CCACCAGAGGCGGGGCCTCTCCCCAGCTGCCTCGGGATCATCTCTGGTTCTCCTAATTCTAAAAGGACCTaGTGTCTTTCAGAGTGTCGG +
Preference number: 4 (lower is better)
Translates to: PPEAGPLPSCLGIISGSPNSKRT*CLSECR
Trigger: CCGACACTCTGAAAGACAGCAGGTCCTTTTAGAATT...AGGAGAACCAGAGATGATCCCGAGGCAGCTGGGGAGAGGCCCCGCCTCTGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp TGGAACCTCTTCTCAGAAGCGTGGGAGGTGGTGGAGGCCAAGCCCACCAGAGGCTTCTGCCATACAGACTaGTTCTCCTCTGCACTGTGT +
Preference number: 4 (lower is better)
Translates to: WNLFSEAWEVVEAKPTRGFCHTD*FSSALC
Trigger: ACACAGTGCAGAGGAGAAGCAGTCTGTATGGCAGAA...GCCTCTGGTGGGCTTGGCCTCCACCACCTCCCACGCTTCTGAGAAGAGGTTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp GGAGAAGACTGGGAGTCTACACTGGGAATGGTGCTGTGGACGCTCTGGGCACAGTATAGCTCTCGCTGCTaGGATTCTGGGAGAGTTCCG +
Preference number: 4 (lower is better)
Translates to: GEDWESTLGMVLWTLWAQYSSRC*DSGRVP
Trigger: CGGAACTCTCCCAGAATCGCAGCAGCGAGAGCTATA...CTGTGCCCAGAGCGTCCACAGCACCATTCCCAGTGTAGACTCCCAGTCTTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp TCCAAGGCATGCTTCAGTTATACTGCAGCCTGGCCAACCACTGTTCCCTGTAGAGGGCCTCTCCCCAGCTaGCTCGGGATCATCTCTGGT +
Preference number: 4 (lower is better)
Translates to: SKACFSYTAAWPTTVPCRGPLPS*LGIISG
Trigger: ACCAGAGATGATCCCGAGGCAGCTGGGGAGAGGCCC...TCTACAGGGAACAGTGGTTGGCCAGGCTGCAGTATAACTGAAGCATGCCTTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp TGGAACCTCTTCTCAGAAGCGTGGGAGGTGGTGGAGGCCAAGCCCACCAGAGGCTGGCAGACTCTGGAATaGCATTTGTGTGAGTTCCAC +
Preference number: 4 (lower is better)
Translates to: WNLFSEAWEVVEAKPTRGWQTLE*HLCEFH
Trigger: GTGGAACTCACACAAATGGCATTCCAGAGTCTGCCA...GCCTCTGGTGGGCTTGGCCTCCACCACCTCCCACGCTTCTGAGAAGAGGTTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp CAACCACTGTTCCCTGTAGAAGTTGAAGTTCCTCTGTATTATCCAGCAGCTGGACTGCCATTCCGGCCGTaGACCGCCGGCCCACGTGAC +
Preference number: 4 (lower is better)
Translates to: QPLFPVEVEVPLYYPAAGLPFRP*TAGPRD
Trigger: GTCACGTGGGCCGGCGGTCCACGGCCGGAATGGCAG...TCCAGCTGCTGGATAATACAGAGGAACTTCAACTTCTACAGGGAACAGTGGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000625842.3
CDS-3UTR CCA 90 bp AGGCGGGGCCTCTCCCCAGCTGCCTCGGGATCATCTCTGGTTCTCCTGGGCCAGTCTTCCTTTTTAAGTTaGTCCTGTCACCACTATCTG +
Preference number: 4 (lower is better)
Translates to: RRGLSPAASGSSLVLLGQSSFLS*SCHHYL
Trigger: CAGATAGTGGTGACAGGACCAACTTAAAAAGGAAGA...CTGGCCCAGGAGAACCAGAGATGATCCCGAGGCAGCTGGGGAGAGGCCCCGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp AGGCGGGGCCTCTCCCCAGCTGCCTCGGGATCATCTCTGGTTCTCCTGGGCCAGCCATACTTTCAAGGATaGTTTCAATCCAATGACCAG +
Preference number: 4 (lower is better)
Translates to: RRGLSPAASGSSLVLLGQPYFQG*FQSNDQ
Trigger: CTGGTCATTGGATTGAAACCATCCTTGAAAGTATGG...CTGGCCCAGGAGAACCAGAGATGATCCCGAGGCAGCTGGGGAGAGGCCCCGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp GGGAATGGTGCTGTGGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTCCAGCAGTGGCACACTaGAAGGATCCATCCGGCCAT +
Preference number: 4 (lower is better)
Translates to: GNGAVDALGTEAQFGTSSPAVAH*KDPSGH
Trigger: ATGGCCGGATGGATCCTTCCAGTGTGCCACTGCTGG...AGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACCATTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp CCAGCAGCTGGAGGAGACGGAGTATGGCAGACTCTGGAATGCCATTTGTGTGAGGTGCCAGGCCAGCAGTaGCACACTGGAAGGATCCAT +
Preference number: 4 (lower is better)
Translates to: PAAGGDGVWQTLECHLCEVPGQQ*HTGRIH
Trigger: ATGGATCCTTCCAGTGTGCCACTGCTGGCCTGGCAC...CTCACACAAATGGCATTCCAGAGTCTGCCATACTCCGTCTCCTCCAGCTGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp GGTGCTGTGGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTCAGAAGGTGCCAGGCCAGCAGTaGCACACTGGAAGGATCCAT +
Preference number: 4 (lower is better)
Translates to: GAVDALGTEAQFGTSSQKVPGQQ*HTGRIH
Trigger: ATGGATCCTTCCAGTGTGCCACTGCTGGCCTGGCAC...CTTCTGAGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp CCAAGCCCACCAGAGGCGGGGCCTCTCCCCAGCTGCCTCGGGATCATCTCTGGTGCCTCACGTTGCTGCTaGTTCAAATTATGTGAATTT +
Preference number: 4 (lower is better)
Translates to: PSPPEAGPLPSCLGIISGASRCC*FKLCEF
Trigger: AAATTCACATAATTTGAACCAGCAGCAACGTGAGGC...ACCAGAGATGATCCCGAGGCAGCTGGGGAGAGGCCCCGCCTCTGGTGGGCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp GGTGCTGTGGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTCAGAAGCATCTCTGGTTCTCCTaGGCCAGGCTCCATGGAGTC +
Preference number: 4 (lower is better)
Translates to: GAVDALGTEAQFGTSSQKHLWFS*ARLHGV
Trigger: GACTCCATGGAGCCTGGCCCAGGAGAACCAGAGATG...CTTCTGAGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp CAGTGTCTGCTCTCTCCAAGGCATGCTTCAGTTATACTGCAGCCTGGCCAACCACCTCGGGATCATCTCTaGTTCTCCTGGGCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: QCLLSPRHASVILQPGQPPRDHL*FSWARL
Trigger: GAGCCTGGCCCAGGAGAACCAGAGATGATCCCGAGG...TGGTTGGCCAGGCTGCAGTATAACTGAAGCATGCCTTGGAGAGAGCAGACACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp GGTTTTAACATGAACACATTAAAGGGAGATGGCCCTGGCCCCCACAGTGTCTGCCAGAAGCGTGGGAGGTaGTGGAGGCCAAGCCCACCA +
Preference number: 4 (lower is better)
Translates to: GFNMNTLKGDGPGPHSVCQKRGR*WRPSPP
Trigger: TGGTGGGCTTGGCCTCCACCACCTCCCACGCTTCTG...GCAGACACTGTGGGGGCCAGGGCCATCTCCCTTTAATGTGTTCATGTTAAAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp GGGAATGGTGCTGTGGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTCTCTTCTCAGAAGCGTaGGAGGTGGTGGAGGCCAAG +
Preference number: 4 (lower is better)
Translates to: GNGAVDALGTEAQFGTSSLFSEA*EVVEAK
Trigger: CTTGGCCTCCACCACCTCCCACGCTTCTGAGAAGAG...AGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACCATTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp GCACAGAAGCCCAATTTGGAACCTCTTCTCAGAAGCGTGGGAGGTGGTGGAGGCACTGGGAGTCTACACTaGGAATGGTGCTGTGGACGC +
Preference number: 4 (lower is better)
Translates to: AQKPNLEPLLRSVGGGGGTGSLH*EWCCGR
Trigger: GCGTCCACAGCACCATTCCCAGTGTAGACTCCCAGT...GCCTCCACCACCTCCCACGCTTCTGAGAAGAGGTTCCAAATTGGGCTTCTGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
3UTR CAA 72 bp ATGGTGCTGTGGACGCTCTGGGCACAGAAGCCCAATTaGGAACCTCTTCTCAGAAGCGTGGGAGGTGGTGGA +
Preference number: 4 (lower is better)
Translates to: MVLWTLWAQKPN*EPLLRSVGGGG
Trigger: TCCACCACCTCCCACGCTTCTGAGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp CCAAGCCCACCAGAGGCGGGGCCTCTCCCCAGCTGCCTCGGGATCATCTCTGGTATGGTTTCAATCCAATaGCCAGTATTTTTGTCAAGG +
Preference number: 4 (lower is better)
Translates to: PSPPEAGPLPSCLGIISGMVSIQ*PVFLSR
Trigger: CCTTGACAAAAATACTGGTCATTGGATTGAAACCAT...ACCAGAGATGATCCCGAGGCAGCTGGGGAGAGGCCCCGCCTCTGGTGGGCTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp GGAGAAGACTGGGAGTCTACACTGGGAATGGTGCTGTGGACGCTCTGGGCACAGGACCAGCTGAACTTCTaGGATCTCCACTGTCTCCAA +
Preference number: 4 (lower is better)
Translates to: GEDWESTLGMVLWTLWAQDQLNF*DLHCLQ
Trigger: TTGGAGACAGTGGAGATCTCAGAAGTTCAGCTGGTC...CTGTGCCCAGAGCGTCCACAGCACCATTCCCAGTGTAGACTCCCAGTCTTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp GAACCTCTTCTCAGAAGCGTGGGAGGTGGTGGAGGCCAAGCCCACCAGAGGCGGAGACATTTTTACCTGTaGTGGGGTTATCCTTCCCTT +
Preference number: 4 (lower is better)
Translates to: EPLLRSVGGGGGQAHQRRRHFYL*WGYPSL
Trigger: AAGGGAAGGATAACCCCATCACAGGTAAAAATGTCT...CCGCCTCTGGTGGGCTTGGCCTCCACCACCTCCCACGCTTCTGAGAAGAGGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp CAGTGTCTGCTCTCTCCAAGGCATGCTTCAGTTATACTGCAGCCTGGCCAACCACACTCTGCGAGCCACTaGATGGCCTATAGCTCTCGC +
Preference number: 4 (lower is better)
Translates to: QCLLSPRHASVILQPGQPHSASH*MAYSSR
Trigger: GCGAGAGCTATAGGCCATTCAGTGGCTCGCAGAGTG...TGGTTGGCCAGGCTGCAGTATAACTGAAGCATGCCTTGGAGAGAGCAGACACTG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp CCCCAGCTGCCTCGGGATCATCTCTGGTTCTCCTGGGCCAGGCTCCATGGAGTCCTTGATATGCAATATTaGTGTTCCTGGAGGATGAGC +
Preference number: 4 (lower is better)
Translates to: PQLPRDHLWFSWARLHGVLDMQY*CSWRMS
Trigger: GCTCATCCTCCAGGAACAGCAATATTGCATATCAAG...GACTCCATGGAGCCTGGCCCAGGAGAACCAGAGATGATCCCGAGGCAGCTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp CCCCAGCTGCCTCGGGATCATCTCTGGTTCTCCTGGGCCAGGCTCCATGGAGTCGCTGTCGTTGCAAATTaGAAGAGTTGGATCATCTGT +
Preference number: 4 (lower is better)
Translates to: PQLPRDHLWFSWARLHGVAVVAN*KSWIIC
Trigger: ACAGATGATCCAACTCTTGCAATTTGCAACGACAGC...GACTCCATGGAGCCTGGCCCAGGAGAACCAGAGATGATCCCGAGGCAGCTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp GAACCTCTTCTCAGAAGCGTGGGAGGTGGTGGAGGCCAAGCCCACCAGAGGCGGGCTGTCGTTGCAAATTaGAAGAGTTGGATCATCTGT +
Preference number: 4 (lower is better)
Translates to: EPLLRSVGGGGGQAHQRRAVVAN*KSWIIC
Trigger: ACAGATGATCCAACTCTTGCAATTTGCAACGACAGC...CCGCCTCTGGTGGGCTTGGCCTCCACCACCTCCCACGCTTCTGAGAAGAGGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp TGGAACCTCTTCTCAGAAGCGTGGGAGGTGGTGGAGGCCAAGCCCACCAGAGGCAACTCAGGCTTAGAATaGAGAGGCTCAATACAGCAG +
Preference number: 4 (lower is better)
Translates to: WNLFSEAWEVVEAKPTRGNSGLE*RGSIQQ
Trigger: CTGCTGTATTGAGCCTCTGCATTCTAAGCCTGAGTT...GCCTCTGGTGGGCTTGGCCTCCACCACCTCCCACGCTTCTGAGAAGAGGTTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp GCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTCAGAAGCGTGGGAGGTGGTGTACTGCTACAAAGTaGCAGGCCAGCAGTGGCACA +
Preference number: 4 (lower is better)
Translates to: ALGTEAQFGTSSQKRGRWCTATK*QASSGT
Trigger: TGTGCCACTGCTGGCCTGGCACTTTGTAGCAGTACA...CCACCTCCCACGCTTCTGAGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp CCACCAGAGGCGGGGCCTCTCCCCAGCTGCCTCGGGATCATCTCTGGTTCTCCTAATTCCTCTTGTGTTTaGCGATCAATCACATGCAAC +
Preference number: 4 (lower is better)
Translates to: PPEAGPLPSCLGIISGSPNSSCV*RSITCN
Trigger: GTTGCATGTGATTGATCGGCAAACACAAGAGGAATT...AGGAGAACCAGAGATGATCCCGAGGCAGCTGGGGAGAGGCCCCGCCTCTGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp CCACCAGAGGCGGGGCCTCTCCCCAGCTGCCTCGGGATCATCTCTGGTTCTCCTCCATACTTTCAAGGATaGTTTCAATCCAATGACCAG +
Preference number: 4 (lower is better)
Translates to: PPEAGPLPSCLGIISGSPPYFQG*FQSNDQ
Trigger: CTGGTCATTGGATTGAAACCATCCTTGAAAGTATGG...AGGAGAACCAGAGATGATCCCGAGGCAGCTGGGGAGAGGCCCCGCCTCTGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp TGGAACCTCTTCTCAGAAGCGTGGGAGGTGGTGGAGGCCAAGCCCACCAGAGGCGATTTTTCCTTGGTCTaGGCACTTTTTCAGAGCTCG +
Preference number: 4 (lower is better)
Translates to: WNLFSEAWEVVEAKPTRGDFSLV*ALFQSS
Trigger: CGAGCTCTGAAAAAGTGCCCAGACCAAGGAAAAATC...GCCTCTGGTGGGCTTGGCCTCCACCACCTCCCACGCTTCTGAGAAGAGGTTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp GGGAATGGTGCTGTGGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTGTCCAGAAAAGTGGGTaGCAACCAGCTCCGCAGCTT +
Preference number: 4 (lower is better)
Translates to: GNGAVDALGTEAQFGTSSVQKSG*QPAPQL
Trigger: AAGCTGCGGAGCTGGTTGCCACCCACTTTTCTGGAC...AGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACCATTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp CCCCAGCTGCCTCGGGATCATCTCTGGTTCTCCTGGGCCAGGCTCCATGGAGTCCTCTATAACTTGGGTTaGGTTGAACTGACACAACAG +
Preference number: 4 (lower is better)
Translates to: PQLPRDHLWFSWARLHGVLYNLG*VELTQQ
Trigger: CTGTTGTGTCAGTTCAACCCAACCCAAGTTATAGAG...GACTCCATGGAGCCTGGCCCAGGAGAACCAGAGATGATCCCGAGGCAGCTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp CCACCAGAGGCGGGGCCTCTCCCCAGCTGCCTCGGGATCATCTCTGGTTCTCCTGCCTCACGTTGCTGCTaGTTCAAATTATGTGAATTT +
Preference number: 4 (lower is better)
Translates to: PPEAGPLPSCLGIISGSPASRCC*FKLCEF
Trigger: AAATTCACATAATTTGAACCAGCAGCAACGTGAGGC...AGGAGAACCAGAGATGATCCCGAGGCAGCTGGGGAGAGGCCCCGCCTCTGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp CAATGTGGAGAAGACTGGGAGTCTACACTGGGAATGGTGCTGTGGACGCTCTGGGAGGAATGGCTGAACTaGACAGCTTCTGAGGGGCCA +
Preference number: 4 (lower is better)
Translates to: QCGEDWESTLGMVLWTLWEEWLN*TASEGP
Trigger: TGGCCCCTCAGAAGCTGTCCAGTTCAGCCATTCCTC...CCAGAGCGTCCACAGCACCATTCCCAGTGTAGACTCCCAGTCTTCTCCACATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp GAACCTCTTCTCAGAAGCGTGGGAGGTGGTGGAGGCCAAGCCCACCAGAGGCGGGACCAATGGAGATCTTaGTTTAGAAGGCTGGTTGTT +
Preference number: 4 (lower is better)
Translates to: EPLLRSVGGGGGQAHQRRDQWRS*FRRLVV
Trigger: AACAACCAGCCTTCTAAACCAAGATCTCCATTGGTC...CCGCCTCTGGTGGGCTTGGCCTCCACCACCTCCCACGCTTCTGAGAAGAGGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp GTGGAGAAGACTGGGAGTCTACACTGGGAATGGTGCTGTGGACGCTCTGGGCACCAGTGGGATCCCCTTTaGACTGATGATACGATGGAG +
Preference number: 4 (lower is better)
Translates to: VEKTGSLHWEWCCGRSGHQWDPL*TDDTME
Trigger: CTCCATCGTATCATCAGTCCAAAGGGGATCCCACTG...GTGCCCAGAGCGTCCACAGCACCATTCCCAGTGTAGACTCCCAGTCTTCTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp CCAGCAGCTGGAGGAGACGGAGTATGGCAGACTCTGGAATGCCATTTGTGTGAGCTGCGAGCCACTGAATaGCCTATAGCTCTCGCTGCT +
Preference number: 4 (lower is better)
Translates to: PAAGGDGVWQTLECHLCELRATE*PIALAA
Trigger: AGCAGCGAGAGCTATAGGCCATTCAGTGGCTCGCAG...CTCACACAAATGGCATTCCAGAGTCTGCCATACTCCGTCTCCTCCAGCTGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp AATGGTGCTGTGGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTCAGCTCTTCTCAGAAGCGTaGGAGGTGGTGGAGGCCAAG +
Preference number: 4 (lower is better)
Translates to: NGAVDALGTEAQFGTSSQLFSEA*EVVEAK
Trigger: CTTGGCCTCCACCACCTCCCACGCTTCTGAGAAGAG...CTGAGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp CAATGTGGAGAAGACTGGGAGTCTACACTGGGAATGGTGCTGTGGACGCTCTGGGTGCTGTGGACGCTCTaGGCACAGAAGCCCAATTTG +
Preference number: 4 (lower is better)
Translates to: QCGEDWESTLGMVLWTLWVLWTL*AQKPNL
Trigger: CAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCAC...CCAGAGCGTCCACAGCACCATTCCCAGTGTAGACTCCCAGTCTTCTCCACATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp GGGAATGGTGCTGTGGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTAGTCTACACTGGGAATaGTGCTGTGGACGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: GNGAVDALGTEAQFGTSSSLHWE*CCGRSG
Trigger: CCCAGAGCGTCCACAGCACCATTCCCAGTGTAGACT...AGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACCATTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp TGGGAATGGTGCTGTGGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCCACATTAAAGGGAGATaGCCCTGGCCCCCACAGTGT +
Preference number: 4 (lower is better)
Translates to: WEWCCGRSGHRSPIWNLFHIKGR*PWPPQC
Trigger: ACACTGTGGGGGCCAGGGCCATCTCCCTTTAATGTG...GAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACCATTCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp GGGAATGGTGCTGTGGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTCACATTAAAGGGAGATaGCCCTGGCCCCCACAGTGT +
Preference number: 4 (lower is better)
Translates to: GNGAVDALGTEAQFGTSSHIKGR*PWPPQC
Trigger: ACACTGTGGGGGCCAGGGCCATCTCCCTTTAATGTG...AGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACCATTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp GAACCTCTTCTCAGAAGCGTGGGAGGTGGTGGAGGCCAAGCCCACCAGAGGCGGCGCATAACTGATCCATaGAGTGAAAAAGAATCAGGT +
Preference number: 4 (lower is better)
Translates to: EPLLRSVGGGGGQAHQRRRITDP*SEKESG
Trigger: ACCTGATTCTTTTTCACTTCATGGATCAGTTATGCG...CCGCCTCTGGTGGGCTTGGCCTCCACCACCTCCCACGCTTCTGAGAAGAGGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp GAACCTCTTCTCAGAAGCGTGGGAGGTGGTGGAGGCCAAGCCCACCAGAGGCGGGCCACAAAGAAGTCTTaGGCAATCATTGTTGATACT +
Preference number: 4 (lower is better)
Translates to: EPLLRSVGGGGGQAHQRRATKKS*AIIVDT
Trigger: AGTATCAACAATGATTGCTCAAGACTTCTTTGTGGC...CCGCCTCTGGTGGGCTTGGCCTCCACCACCTCCCACGCTTCTGAGAAGAGGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp CCACCAGAGGCGGGGCCTCTCCCCAGCTGCCTCGGGATCATCTCTGGTTCTCCTATGGTTTCAATCCAATaGCCAGTATTTTTGTCAAGG +
Preference number: 4 (lower is better)
Translates to: PPEAGPLPSCLGIISGSPMVSIQ*PVFLSR
Trigger: CCTTGACAAAAATACTGGTCATTGGATTGAAACCAT...AGGAGAACCAGAGATGATCCCGAGGCAGCTGGGGAGAGGCCCCGCCTCTGGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp TGGAACCTCTTCTCAGAAGCGTGGGAGGTGGTGGAGGCCAAGCCCACCAGAGGCTCATTACTTGGGGTGTaGTTCCCACCAATTTATCAC +
Preference number: 4 (lower is better)
Translates to: WNLFSEAWEVVEAKPTRGSLLGV*FPPIYH
Trigger: GTGATAAATTGGTGGGAATCACACCCCAAGTAATGA...GCCTCTGGTGGGCTTGGCCTCCACCACCTCCCACGCTTCTGAGAAGAGGTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000625842.3
CDS-3UTR TCA 90 bp TGGAACCTCTTCTCAGAAGCGTGGGAGGTGGTGGAGGCCAAGCCCACCAGAGGCATGAGAACTACCTGCTaGATATCTAGGCTGGTGATA +
Preference number: 4 (lower is better)
Translates to: WNLFSEAWEVVEAKPTRGMRTTC*ISRLVI
Trigger: TATCACCAGCCTAGATATTCAGCAGGTAGTTCTCAT...GCCTCTGGTGGGCTTGGCCTCCACCACCTCCCACGCTTCTGAGAAGAGGTTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000625842.3
CDS-3UTR TCA 90 bp GCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTCAGAAGCGTGGGAGGTGGGCTTCAGAGTGTAGATaGGGAATGGCTGAACTGGAC +
Preference number: 4 (lower is better)
Translates to: ALGTEAQFGTSSQKRGRWASECR*GMAELD
Trigger: GTCCAGTTCAGCCATTCCTCATCTACACTCTGAAGC...CCACCTCCCACGCTTCTGAGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp ACTGGGAGTCTACACTGGGAATGGTGCTGTGGACGCTCTGGGCACAGAAGCCCAACTGGATACTGCAATTaGTGTAGGCAAGCCAGCATC +
Preference number: 4 (lower is better)
Translates to: TGSLHWEWCCGRSGHRSPTGYCN*CRQASI
Trigger: GATGCTGGCTTGCCTACAGCAATTGCAGTATCCAGT...TGGGCTTCTGTGCCCAGAGCGTCCACAGCACCATTCCCAGTGTAGACTCCCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp CCAGCAGCTGGAGGAGACGGAGTATGGCAGACTCTGGAATGCCATTTGTGTGAGTGTACTGCTACAAAGTaGCAGGCCAGCAGTGGCACA +
Preference number: 4 (lower is better)
Translates to: PAAGGDGVWQTLECHLCECTATK*QASSGT
Trigger: TGTGCCACTGCTGGCCTGGCACTTTGTAGCAGTACA...CTCACACAAATGGCATTCCAGAGTCTGCCATACTCCGTCTCCTCCAGCTGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp AGGCGGGGCCTCTCCCCAGCTGCCTCGGGATCATCTCTGGTTCTCCTGGGCCAGCTTAGTAACATGTATTaGTCCAGATTCATCTCTCTT +
Preference number: 4 (lower is better)
Translates to: RRGLSPAASGSSLVLLGQLSNMY*SRFISL
Trigger: AAGAGAGATGAATCTGGAGCAATACATGTTACTAAG...CTGGCCCAGGAGAACCAGAGATGATCCCGAGGCAGCTGGGGAGAGGCCCCGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp GCACAGAAGCCCAATTTGGAACCTCTTCTCAGAAGCGTGGGAGGTGGTGGAGGCTCCAACCAAAGCCAGTaGCTGGCTAACATTTCCTCC +
Preference number: 4 (lower is better)
Translates to: AQKPNLEPLLRSVGGGGGSNQSQ*LANISS
Trigger: GGAGGAAATGTTAGCCAGGCACTGGCTTTGGTTGGA...GCCTCCACCACCTCCCACGCTTCTGAGAAGAGGTTCCAAATTGGGCTTCTGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp CCCAATTTGGAACCTCTTCTCAGAAGCGTGGGAGGTGGTGGAGGCCAAGCCCACACTATGCCTCCAGCCTaGAGCAATTCTAAAAGGACC +
Preference number: 4 (lower is better)
Translates to: PNLEPLLRSVGGGGGQAHTMPPA*SNSKRT
Trigger: GGTCCTTTTAGAATTGCTGCAGGCTGGAGGCATAGT...GTGGGCTTGGCCTCCACCACCTCCCACGCTTCTGAGAAGAGGTTCCAAATTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp GGAGAAGACTGGGAGTCTACACTGGGAATGGTGCTGTGGACGCTCTGGGCACAGACTATGCCTCCAGCCTaGAGCAATTCTAAAAGGACC +
Preference number: 4 (lower is better)
Translates to: GEDWESTLGMVLWTLWAQTMPPA*SNSKRT
Trigger: GGTCCTTTTAGAATTGCTGCAGGCTGGAGGCATAGT...CTGTGCCCAGAGCGTCCACAGCACCATTCCCAGTGTAGACTCCCAGTCTTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp GAACCTCTTCTCAGAAGCGTGGGAGGTGGTGGAGGCCAAGCCCACCAGAGGCGGTCCTGTAAGATTCTTTaGAAGATTGATGGAAGGGCA +
Preference number: 4 (lower is better)
Translates to: EPLLRSVGGGGGQAHQRRSCKIL*KIDGRA
Trigger: TGCCCTTCCATCAATCTTGCAAAGAATCTTACAGGA...CCGCCTCTGGTGGGCTTGGCCTCCACCACCTCCCACGCTTCTGAGAAGAGGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp CAATGTGGAGAAGACTGGGAGTCTACACTGGGAATGGTGCTGTGGACGCTCTGGTATAGCTCTCGCTGCTaGGATTCTGGGAGAGTTCCG +
Preference number: 4 (lower is better)
Translates to: QCGEDWESTLGMVLWTLWYSSRC*DSGRVP
Trigger: CGGAACTCTCCCAGAATCGCAGCAGCGAGAGCTATA...CCAGAGCGTCCACAGCACCATTCCCAGTGTAGACTCCCAGTCTTCTCCACATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp GGGAATGGTGCTGTGGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTAAAGCAGGAGCACTCTaGGAGCCACTGAATGGCCTA +
Preference number: 4 (lower is better)
Translates to: GNGAVDALGTEAQFGTSSKAGAL*EPLNGL
Trigger: TAGGCCATTCAGTGGCTCGCAGAGTGCTCCTGCTTT...AGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACCATTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp CCAGCAGCTGGAGGAGACGGAGTATGGCAGACTCTGGAATGCCATTTGTGTGAGAAAGCAGGAGCACTCTaGGAGCCACTGAATGGCCTA +
Preference number: 4 (lower is better)
Translates to: PAAGGDGVWQTLECHLCEKAGAL*EPLNGL
Trigger: TAGGCCATTCAGTGGCTCGCAGAGTGCTCCTGCTTT...CTCACACAAATGGCATTCCAGAGTCTGCCATACTCCGTCTCCTCCAGCTGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp GGTTTTAACATGAACACATTAAAGGGAGATGGCCCTGGCCCCCACAGTGTCTGCCTACACTGGGAATGGTaGTGTGGACGCTCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: GFNMNTLKGDGPGPHSVCLHWEW*CGRSGH
Trigger: GTGCCCAGAGCGTCCACAGCACCATTCCCAGTGTAG...GCAGACACTGTGGGGGCCAGGGCCATCTCCCTTTAATGTGTTCATGTTAAAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp CCAAGCCCACCAGAGGCGGGGCCTCTCCCCAGCTGCCTCGGGATCATCTCTGGTGCAAATTGCAAGAGTTaGATCATCTGTAAACTTGAT +
Preference number: 4 (lower is better)
Translates to: PSPPEAGPLPSCLGIISGANCKS*IICKLD
Trigger: ATCAAGTTTACAGATGATCCAACTCTTGCAATTTGC...ACCAGAGATGATCCCGAGGCAGCTGGGGAGAGGCCCCGCCTCTGGTGGGCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp CCCCAGCTGCCTCGGGATCATCTCTGGTTCTCCTGGGCCAGGCTCCATGGAGTCAAGTCTTTCATTACTTaGGGTGTGATTCCCACCAAT +
Preference number: 4 (lower is better)
Translates to: PQLPRDHLWFSWARLHGVKSFIT*GVIPTN
Trigger: ATTGGTGGGAATCACACCCCAAGTAATGAAAGACTT...GACTCCATGGAGCCTGGCCCAGGAGAACCAGAGATGATCCCGAGGCAGCTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000625842.3
CDS-3UTR CCA 90 bp GCACAGAAGCCCAATTTGGAACCTCTTCTCAGAAGCGTGGGAGGTGGTGGAGGCATATGTCCAGAAAAGTaGGTGGCAACCAGCTCCGCA +
Preference number: 4 (lower is better)
Translates to: AQKPNLEPLLRSVGGGGGICPEK*VATSSA
Trigger: TGCGGAGCTGGTTGCCACCCACTTTTCTGGACATAT...GCCTCCACCACCTCCCACGCTTCTGAGAAGAGGTTCCAAATTGGGCTTCTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp ATCCAGCAGCTGGAGGAGACGGAGTATGGCAGACTCTGGAATGCCATTTGTGTGGAGGAATGGCTGAACTaGACAGCTTCTGAGGGGCCA +
Preference number: 4 (lower is better)
Translates to: IQQLEETEYGRLWNAICVEEWLN*TASEGP
Trigger: TGGCCCCTCAGAAGCTGTCCAGTTCAGCCATTCCTC...CACACAAATGGCATTCCAGAGTCTGCCATACTCCGTCTCCTCCAGCTGCTGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp CCCAATTTGGAACCTCTTCTCAGAAGCGTGGGAGGTGGTGGAGGCCAAGCCCACCTTGGTTTAGAAGGCTaGTTGTTGTTTCCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: PNLEPLLRSVGGGGGQAHLGLEG*LLFPAG
Trigger: CCCTGCTGGAAACAACAACCAGCCTTCTAAACCAAG...GTGGGCTTGGCCTCCACCACCTCCCACGCTTCTGAGAAGAGGTTCCAAATTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp GTGGAGAAGACTGGGAGTCTACACTGGGAATGGTGCTGTGGACGCTCTGGGCACCTTGGTTTAGAAGGCTaGTTGTTGTTTCCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: VEKTGSLHWEWCCGRSGHLGLEG*LLFPAG
Trigger: CCCTGCTGGAAACAACAACCAGCCTTCTAAACCAAG...GTGCCCAGAGCGTCCACAGCACCATTCCCAGTGTAGACTCCCAGTCTTCTCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp ACTGGGAGTCTACACTGGGAATGGTGCTGTGGACGCTCTGGGCACAGAAGCCCACTTGGTTTAGAAGGCTaGTTGTTGTTTCCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: TGSLHWEWCCGRSGHRSPLGLEG*LLFPAG
Trigger: CCCTGCTGGAAACAACAACCAGCCTTCTAAACCAAG...TGGGCTTCTGTGCCCAGAGCGTCCACAGCACCATTCCCAGTGTAGACTCCCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp ATCCAGCAGCTGGAGGAGACGGAGTATGGCAGACTCTGGAATGCCATTTGTGTGTCGCTGCTGCGATTCTaGGAGAGTTCCGTGAGGAGA +
Preference number: 4 (lower is better)
Translates to: IQQLEETEYGRLWNAICVSLLRF*ESSVRR
Trigger: TCTCCTCACGGAACTCTCCCAGAATCGCAGCAGCGA...CACACAAATGGCATTCCAGAGTCTGCCATACTCCGTCTCCTCCAGCTGCTGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp AATGGTGCTGTGGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTCAGCTGCGAGCCACTGAATaGCCTATAGCTCTCGCTGCT +
Preference number: 4 (lower is better)
Translates to: NGAVDALGTEAQFGTSSQLRATE*PIALAA
Trigger: AGCAGCGAGAGCTATAGGCCATTCAGTGGCTCGCAG...CTGAGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp GAACCTCTTCTCAGAAGCGTGGGAGGTGGTGGAGGCCAAGCCCACCAGAGGCGGTGGAAGTTCTCATTCTaGAAGATGCTGTTGAAAGCA +
Preference number: 4 (lower is better)
Translates to: EPLLRSVGGGGGQAHQRRWKFSF*KMLLKA
Trigger: TGCTTTCAACAGCATCTTCCAGAATGAGAACTTCCA...CCGCCTCTGGTGGGCTTGGCCTCCACCACCTCCCACGCTTCTGAGAAGAGGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp CTGCAGCCTGGCCAACCACTGTTCCCTGTAGAAGTTGAAGTTCCTCTGTATTATCAGAAGCGTGGGAGGTaGTGGAGGCCAAGCCCACCA +
Preference number: 4 (lower is better)
Translates to: LQPGQPLFPVEVEVPLYYQKRGR*WRPSPP
Trigger: TGGTGGGCTTGGCCTCCACCACCTCCCACGCTTCTG...ATAATACAGAGGAACTTCAACTTCTACAGGGAACAGTGGTTGGCCAGGCTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp ACAGCAATGTGGAGAAGACTGGGAGTCTACACTGGGAATGGTGCTGTGGACGCTAGTCTACACTGGGAATaGTGCTGTGGACGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: TAMWRRLGVYTGNGAVDASLHWE*CCGRSG
Trigger: CCCAGAGCGTCCACAGCACCATTCCCAGTGTAGACT...AGCGTCCACAGCACCATTCCCAGTGTAGACTCCCAGTCTTCTCCACATTGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp GCACAGAAGCCCAATTTGGAACCTCTTCTCAGAAGCGTGGGAGGTGGTGGAGGCGCCATGACAGCAATGTaGAGAAGACTGGGAGTCTAC +
Preference number: 4 (lower is better)
Translates to: AQKPNLEPLLRSVGGGGGAMTAM*RRLGVY
Trigger: GTAGACTCCCAGTCTTCTCCACATTGCTGTCATGGC...GCCTCCACCACCTCCCACGCTTCTGAGAAGAGGTTCCAAATTGGGCTTCTGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp GGTGCTGTGGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTCAGAAGGGAGGAGACGGAGTATaGCAGACTCTGGAATGCCAT +
Preference number: 4 (lower is better)
Translates to: GAVDALGTEAQFGTSSQKGGDGV*QTLECH
Trigger: ATGGCATTCCAGAGTCTGCCATACTCCGTCTCCTCC...CTTCTGAGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp GGGAATGGTGCTGTGGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTGGAGGAGACGGAGTATaGCAGACTCTGGAATGCCAT +
Preference number: 4 (lower is better)
Translates to: GNGAVDALGTEAQFGTSSGGDGV*QTLECH
Trigger: ATGGCATTCCAGAGTCTGCCATACTCCGTCTCCTCC...AGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACCATTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp CAATGTGGAGAAGACTGGGAGTCTACACTGGGAATGGTGCTGTGGACGCTCTGGCTGAATGATTATCTCTaGGCTTGCTGCCATTCCGGC +
Preference number: 4 (lower is better)
Translates to: QCGEDWESTLGMVLWTLWLNDYL*ACCHSG
Trigger: GCCGGAATGGCAGCAAGCTCAGAGATAATCATTCAG...CCAGAGCGTCCACAGCACCATTCCCAGTGTAGACTCCCAGTCTTCTCCACATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp TGGAACCTCTTCTCAGAAGCGTGGGAGGTGGTGGAGGCCAAGCCCACCAGAGGCCAATCAGATCATTTTTaGACTCCAGTTCCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: WNLFSEAWEVVEAKPTRGQSDHF*TPVPCP
Trigger: TGGACAAGGAACTGGAGTTCAAAAATGATCTGATTG...GCCTCTGGTGGGCTTGGCCTCCACCACCTCCCACGCTTCTGAGAAGAGGTTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp GAACCTCTTCTCAGAAGCGTGGGAGGTGGTGGAGGCCAAGCCCACCAGAGGCGGTTTACCAATAGAAAATaGACAACATCTCCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: EPLLRSVGGGGGQAHQRRFTNRK*TTSPLQ
Trigger: CTGCAGAGGAGATGTTGTTCATTTTCTATTGGTAAA...CCGCCTCTGGTGGGCTTGGCCTCCACCACCTCCCACGCTTCTGAGAAGAGGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp GGAGAAGACTGGGAGTCTACACTGGGAATGGTGCTGTGGACGCTCTGGGCACAGGACCACCATAGCTACTaGTGGATTGATAACAAGCCT +
Preference number: 4 (lower is better)
Translates to: GEDWESTLGMVLWTLWAQDHHSY*WIDNKP
Trigger: AGGCTTGTTATCAATCCATCAGTAGCTATGGTGGTC...CTGTGCCCAGAGCGTCCACAGCACCATTCCCAGTGTAGACTCCCAGTCTTCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp GTGGAGAAGACTGGGAGTCTACACTGGGAATGGTGCTGTGGACGCTCTGGGCACGACCACCATAGCTACTaGTGGATTGATAACAAGCCT +
Preference number: 4 (lower is better)
Translates to: VEKTGSLHWEWCCGRSGHDHHSY*WIDNKP
Trigger: AGGCTTGTTATCAATCCATCAGTAGCTATGGTGGTC...GTGCCCAGAGCGTCCACAGCACCATTCCCAGTGTAGACTCCCAGTCTTCTCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp CCCAATTTGGAACCTCTTCTCAGAAGCGTGGGAGGTGGTGGAGGCCAAGCCCACTTTCTGCCATCCGGATaGGTCGACTCTCTTCAAATT +
Preference number: 4 (lower is better)
Translates to: PNLEPLLRSVGGGGGQAHFLPSG*VDSLQI
Trigger: AATTTGAAGAGAGTCGACTCATCCGGATGGCAGAAA...GTGGGCTTGGCCTCCACCACCTCCCACGCTTCTGAGAAGAGGTTCCAAATTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp CTCTCTCCAAGGCATGCTTCAGTTATACTGCAGCCTGGCCAACCACTGTTCCCTGATTCAGTCCTCTGGTaGCCGAAGCTCTCAGGTTAC +
Preference number: 4 (lower is better)
Translates to: LSPRHASVILQPGQPLFPDSVLW*PKLSGY
Trigger: GTAACCTGAGAGCTTCGGTCACCAGAGGACTGAATC...AGGGAACAGTGGTTGGCCAGGCTGCAGTATAACTGAAGCATGCCTTGGAGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp CAACCACTGTTCCCTGTAGAAGTTGAAGTTCCTCTGTATTATCCAGCAGCTGGATCTGGGAGAGTTCCGTaGGGAGAGCCAGCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: QPLFPVEVEVPLYYPAAGSGRVP*GEPAWS
Trigger: GCTCCAGGCTGGCTCTCCTCACGGAACTCTCCCAGA...TCCAGCTGCTGGATAATACAGAGGAACTTCAACTTCTACAGGGAACAGTGGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp GGTGCTGTGGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTCAGAAGATGAGTCTGGTGAACTaGCGCCATGACAGCAATGTG +
Preference number: 4 (lower is better)
Translates to: GAVDALGTEAQFGTSSQKMSLVN*RHDSNV
Trigger: CACATTGCTGTCATGGCGTCAGTTCACCAGACTCAT...CTTCTGAGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp GGGAATGGTGCTGTGGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTATGAGTCTGGTGAACTaGCGCCATGACAGCAATGTG +
Preference number: 4 (lower is better)
Translates to: GNGAVDALGTEAQFGTSSMSLVN*RHDSNV
Trigger: CACATTGCTGTCATGGCGTCAGTTCACCAGACTCAT...AGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACCATTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp ACTGGGAGTCTACACTGGGAATGGTGCTGTGGACGCTCTGGGCACAGAAGCCCAATCTACTTTGTCAGCTaGAGACACTATCTGGGCAGA +
Preference number: 4 (lower is better)
Translates to: TGSLHWEWCCGRSGHRSPIYFVS*RHYLGR
Trigger: TCTGCCCAGATAGTGTCTGCAGCTGACAAAGTAGAT...TGGGCTTCTGTGCCCAGAGCGTCCACAGCACCATTCCCAGTGTAGACTCCCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp CTCTCTCCAAGGCATGCTTCAGTTATACTGCAGCCTGGCCAACCACTGTTCCCTTGTACTGCTACAAAGTaGCAGGCCAGCAGTGGCACA +
Preference number: 4 (lower is better)
Translates to: LSPRHASVILQPGQPLFPCTATK*QASSGT
Trigger: TGTGCCACTGCTGGCCTGGCACTTTGTAGCAGTACA...AGGGAACAGTGGTTGGCCAGGCTGCAGTATAACTGAAGCATGCCTTGGAGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp GTGGAGAAGACTGGGAGTCTACACTGGGAATGGTGCTGTGGACGCTCTGGGCACTTCTACCATCCGGTCTaGAACAATAGCCTTTCGCTT +
Preference number: 4 (lower is better)
Translates to: VEKTGSLHWEWCCGRSGHFYHPV*NNSLSL
Trigger: AAGCGAAAGGCTATTGTTGCAGACCGGATGGTAGAA...GTGCCCAGAGCGTCCACAGCACCATTCCCAGTGTAGACTCCCAGTCTTCTCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp GCACAGAAGCCCAATTTGGAACCTCTTCTCAGAAGCGTGGGAGGTGGTGGAGGCACTATGCCTCCAGCCTaGAGCAATTCTAAAAGGACC +
Preference number: 4 (lower is better)
Translates to: AQKPNLEPLLRSVGGGGGTMPPA*SNSKRT
Trigger: GGTCCTTTTAGAATTGCTGCAGGCTGGAGGCATAGT...GCCTCCACCACCTCCCACGCTTCTGAGAAGAGGTTCCAAATTGGGCTTCTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp GCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTCAGAAGCGTGGGAGGTGGACTATGCCTCCAGCCTaGAGCAATTCTAAAAGGACC +
Preference number: 4 (lower is better)
Translates to: ALGTEAQFGTSSQKRGRWTMPPA*SNSKRT
Trigger: GGTCCTTTTAGAATTGCTGCAGGCTGGAGGCATAGT...CCACCTCCCACGCTTCTGAGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp GCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTCAGAAGCGTGGGAGGTGGTTCTGCCATACAGACTaGTTCTCCTCTGCACTGTGT +
Preference number: 4 (lower is better)
Translates to: ALGTEAQFGTSSQKRGRWFCHTD*FSSALC
Trigger: ACACAGTGCAGAGGAGAAGCAGTCTGTATGGCAGAA...CCACCTCCCACGCTTCTGAGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp TGGAACCTCTTCTCAGAAGCGTGGGAGGTGGTGGAGGCCAAGCCCACCAGAGGCCAATATTGCTGTTCCTaGAGGATGAGCATCTGTTAT +
Preference number: 4 (lower is better)
Translates to: WNLFSEAWEVVEAKPTRGQYCCS*RMSICY
Trigger: ATAACAGATGCTCATCCTCCAGGAACAGCAATATTG...GCCTCTGGTGGGCTTGGCCTCCACCACCTCCCACGCTTCTGAGAAGAGGTTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp CCCAATTTGGAACCTCTTCTCAGAAGCGTGGGAGGTGGTGGAGGCCAAGCCCACGATTTTTCCTTGGTCTaGGCACTTTTTCAGAGCTCG +
Preference number: 4 (lower is better)
Translates to: PNLEPLLRSVGGGGGQAHDFSLV*ALFQSS
Trigger: CGAGCTCTGAAAAAGTGCCCAGACCAAGGAAAAATC...GTGGGCTTGGCCTCCACCACCTCCCACGCTTCTGAGAAGAGGTTCCAAATTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp CACCAGAGGCGGGGCCTCTCCCCAGCTGCCTCGGGATCATCTCTGGTTCTCCTGAGAAATTCAAAAACCTaGTTTTTAACCAAGGGAACC +
Preference number: 4 (lower is better)
Translates to: HQRRGLSPAASGSSLVLLRNSKT*FLTKGT
Trigger: GGTTCCCTTGGTTAAAAACCAGGTTTTTGAATTTCT...CAGGAGAACCAGAGATGATCCCGAGGCAGCTGGGGAGAGGCCCCGCCTCTGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp GGTGCTGTGGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTCAGAAGATATGTCCAGAAAAGTaGGTGGCAACCAGCTCCGCA +
Preference number: 4 (lower is better)
Translates to: GAVDALGTEAQFGTSSQKICPEK*VATSSA
Trigger: TGCGGAGCTGGTTGCCACCCACTTTTCTGGACATAT...CTTCTGAGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp TCCAAGGCATGCTTCAGTTATACTGCAGCCTGGCCAACCACTGTTCCCTGTAGACTGCGAGCCACTGAATaGCCTATAGCTCTCGCTGCT +
Preference number: 4 (lower is better)
Translates to: SKACFSYTAAWPTTVPCRLRATE*PIALAA
Trigger: AGCAGCGAGAGCTATAGGCCATTCAGTGGCTCGCAG...TCTACAGGGAACAGTGGTTGGCCAGGCTGCAGTATAACTGAAGCATGCCTTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp GCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTCAGAAGCGTGGGAGGTGGGGAATGAGCTGCAGCTaGAAGTTCTCATTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: ALGTEAQFGTSSQKRGRWGMSCS*KFSFWK
Trigger: CTTCCAGAATGAGAACTTCCAGCTGCAGCTCATTCC...CCACCTCCCACGCTTCTGAGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp GGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTCAGAAGCGTGGGAGGGAATGAGCTGCAGCTaGAAGTTCTCATTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: GRSGHRSPIWNLFSEAWEGMSCS*KFSFWK
Trigger: CTTCCAGAATGAGAACTTCCAGCTGCAGCTCATTCC...CTCCCACGCTTCTGAGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp ACAGCAATGTGGAGAAGACTGGGAGTCTACACTGGGAATGGTGCTGTGGACGCTATCCTCAGTCACAGGTaGAGGAATGAGCTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: TAMWRRLGVYTGNGAVDAILSHR*RNELQL
Trigger: CAGCTGCAGCTCATTCCTCCACCTGTGACTGAGGAT...AGCGTCCACAGCACCATTCCCAGTGTAGACTCCCAGTCTTCTCCACATTGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp ATCCAGCAGCTGGAGGAGACGGAGTATGGCAGACTCTGGAATGCCATTTGTGTGATCCTCAGTCACAGGTaGAGGAATGAGCTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: IQQLEETEYGRLWNAICVILSHR*RNELQL
Trigger: CAGCTGCAGCTCATTCCTCCACCTGTGACTGAGGAT...CACACAAATGGCATTCCAGAGTCTGCCATACTCCGTCTCCTCCAGCTGCTGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp GGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTCAGAAGCGTGGGAGCAATGTGGAGAAGACTaGGAGTCTACACTGGGAATG +
Preference number: 4 (lower is better)
Translates to: GRSGHRSPIWNLFSEAWEQCGED*ESTLGM
Trigger: CATTCCCAGTGTAGACTCCCAGTCTTCTCCACATTG...CTCCCACGCTTCTGAGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp GGTGCTGTGGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTCAGAAGGCCATGACAGCAATGTaGAGAAGACTGGGAGTCTAC +
Preference number: 4 (lower is better)
Translates to: GAVDALGTEAQFGTSSQKAMTAM*RRLGVY
Trigger: GTAGACTCCCAGTCTTCTCCACATTGCTGTCATGGC...CTTCTGAGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp GTGGAGAAGACTGGGAGTCTACACTGGGAATGGTGCTGTGGACGCTCTGGGCACGAGTATGGCAGACTCTaGAATGCCATTTGTGTGAGT +
Preference number: 4 (lower is better)
Translates to: VEKTGSLHWEWCCGRSGHEYGRL*NAICVS
Trigger: ACTCACACAAATGGCATTCCAGAGTCTGCCATACTC...GTGCCCAGAGCGTCCACAGCACCATTCCCAGTGTAGACTCCCAGTCTTCTCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp GGTGCTGTGGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTCAGAAGAGTTATACTGCAGCCTaGCCAACCACTGTTCCCTGT +
Preference number: 4 (lower is better)
Translates to: GAVDALGTEAQFGTSSQKSYTAA*PTTVPC
Trigger: ACAGGGAACAGTGGTTGGCCAGGCTGCAGTATAACT...CTTCTGAGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp GGGAATGGTGCTGTGGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTAGTTATACTGCAGCCTaGCCAACCACTGTTCCCTGT +
Preference number: 4 (lower is better)
Translates to: GNGAVDALGTEAQFGTSSSYTAA*PTTVPC
Trigger: ACAGGGAACAGTGGTTGGCCAGGCTGCAGTATAACT...AGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACCATTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp CCAGCAGCTGGAGGAGACGGAGTATGGCAGACTCTGGAATGCCATTTGTGTGAGAGTTATACTGCAGCCTaGCCAACCACTGTTCCCTGT +
Preference number: 4 (lower is better)
Translates to: PAAGGDGVWQTLECHLCESYTAA*PTTVPC
Trigger: ACAGGGAACAGTGGTTGGCCAGGCTGCAGTATAACT...CTCACACAAATGGCATTCCAGAGTCTGCCATACTCCGTCTCCTCCAGCTGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp ATAGGTTTTAACATGAACACATTAAAGGGAGATGGCCCTGGCCCCCACAGTGTCAAAGGGAGATGGCCCTaGCCCCCACAGTGTCTGCTC +
Preference number: 4 (lower is better)
Translates to: IGFNMNTLKGDGPGPHSVKGRWP*PPQCLL
Trigger: GAGCAGACACTGTGGGGGCCAGGGCCATCTCCCTTT...GACACTGTGGGGGCCAGGGCCATCTCCCTTTAATGTGTTCATGTTAAAACCTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp TCCAAGGCATGCTTCAGTTATACTGCAGCCTGGCCAACCACTGTTCCCTGTAGACACATTAAAGGGAGATaGCCCTGGCCCCCACAGTGT +
Preference number: 4 (lower is better)
Translates to: SKACFSYTAAWPTTVPCRHIKGR*PWPPQC
Trigger: ACACTGTGGGGGCCAGGGCCATCTCCCTTTAATGTG...TCTACAGGGAACAGTGGTTGGCCAGGCTGCAGTATAACTGAAGCATGCCTTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp AATGGTGCTGTGGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTCAGCTGAATGATTATCTCTaGGCTTGCTGCCATTCCGGC +
Preference number: 4 (lower is better)
Translates to: NGAVDALGTEAQFGTSSQLNDYL*ACCHSG
Trigger: GCCGGAATGGCAGCAAGCTCAGAGATAATCATTCAG...CTGAGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp GTGGAGAAGACTGGGAGTCTACACTGGGAATGGTGCTGTGGACGCTCTGGGCACATTAAAGCCAATCCATaGGATGTACCCACTGCTATC +
Preference number: 4 (lower is better)
Translates to: VEKTGSLHWEWCCGRSGHIKANP*DVPTAI
Trigger: GATAGCAGTGGGTACATCTCATGGATTGGCTTTAAT...GTGCCCAGAGCGTCCACAGCACCATTCCCAGTGTAGACTCCCAGTCTTCTCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp TGGAACCTCTTCTCAGAAGCGTGGGAGGTGGTGGAGGCCAAGCCCACCAGAGGCTTTACCAATAGAAAATaGACAACATCTCCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: WNLFSEAWEVVEAKPTRGFTNRK*TTSPLQ
Trigger: CTGCAGAGGAGATGTTGTTCATTTTCTATTGGTAAA...GCCTCTGGTGGGCTTGGCCTCCACCACCTCCCACGCTTCTGAGAAGAGGTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp CAATGTGGAGAAGACTGGGAGTCTACACTGGGAATGGTGCTGTGGACGCTCTGGTGGGTTGGGTTGAACTaGCACAACAGCTCAATGAAC +
Preference number: 4 (lower is better)
Translates to: QCGEDWESTLGMVLWTLWWVGLN*HNSSMN
Trigger: GTTCATTGAGCTGTTGTGTCAGTTCAACCCAACCCA...CCAGAGCGTCCACAGCACCATTCCCAGTGTAGACTCCCAGTCTTCTCCACATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp GGGAATGGTGCTGTGGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTTGGGTTGGGTTGAACTaGCACAACAGCTCAATGAAC +
Preference number: 4 (lower is better)
Translates to: GNGAVDALGTEAQFGTSSWVGLN*HNSSMN
Trigger: GTTCATTGAGCTGTTGTGTCAGTTCAACCCAACCCA...AGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACCATTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp CCTGGCCAACCACTGTTCCCTGTAGAAGTTGAAGTTCCTCTGTATTATCCAGCAGAACTGGACAGCTTCTaGGGGGCCATCATTGCCTCC +
Preference number: 4 (lower is better)
Translates to: PGQPLFPVEVEVPLYYPAELDSF*GAIIAS
Trigger: GGAGGCAATGATGGCCCCTCAGAAGCTGTCCAGTTC...TGCTGGATAATACAGAGGAACTTCAACTTCTACAGGGAACAGTGGTTGGCCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp ACAGCAATGTGGAGAAGACTGGGAGTCTACACTGGGAATGGTGCTGTGGACGCTGCTTCAGAGTGTAGATaGGGAATGGCTGAACTGGAC +
Preference number: 4 (lower is better)
Translates to: TAMWRRLGVYTGNGAVDAASECR*GMAELD
Trigger: GTCCAGTTCAGCCATTCCTCATCTACACTCTGAAGC...AGCGTCCACAGCACCATTCCCAGTGTAGACTCCCAGTCTTCTCCACATTGCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp TCCAAGGCATGCTTCAGTTATACTGCAGCCTGGCCAACCACTGTTCCCTGTAGAGATTCAGTCCTCTGGTaGCCGAAGCTCTCAGGTTAC +
Preference number: 4 (lower is better)
Translates to: SKACFSYTAAWPTTVPCRDSVLW*PKLSGY
Trigger: GTAACCTGAGAGCTTCGGTCACCAGAGGACTGAATC...TCTACAGGGAACAGTGGTTGGCCAGGCTGCAGTATAACTGAAGCATGCCTTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp GGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTCAGAAGCGTGGGAGATCCAGAACAGGTTCTaGGGTTCCCTTTTTAGCAGT +
Preference number: 4 (lower is better)
Translates to: GRSGHRSPIWNLFSEAWEIQNRF*GSLFSS
Trigger: ACTGCTAAAAAGGGAACCTCAGAACCTGTTCTGGAT...CTCCCACGCTTCTGAGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp CCTGGCCAACCACTGTTCCCTGTAGAAGTTGAAGTTCCTCTGTATTATCCAGCACACTCTGCGAGCCACTaGATGGCCTATAGCTCTCGC +
Preference number: 4 (lower is better)
Translates to: PGQPLFPVEVEVPLYYPAHSASH*MAYSSR
Trigger: GCGAGAGCTATAGGCCATTCAGTGGCTCGCAGAGTG...TGCTGGATAATACAGAGGAACTTCAACTTCTACAGGGAACAGTGGTTGGCCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp AATGGTGCTGTGGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTCAGATGAGTCTGGTGAACTaGCGCCATGACAGCAATGTG +
Preference number: 4 (lower is better)
Translates to: NGAVDALGTEAQFGTSSQMSLVN*RHDSNV
Trigger: CACATTGCTGTCATGGCGTCAGTTCACCAGACTCAT...CTGAGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp GCACAGAAGCCCAATTTGGAACCTCTTCTCAGAAGCGTGGGAGGTGGTGGAGGCATCTACTTTGTCAGCTaGAGACACTATCTGGGCAGA +
Preference number: 4 (lower is better)
Translates to: AQKPNLEPLLRSVGGGGGIYFVS*RHYLGR
Trigger: TCTGCCCAGATAGTGTCTGCAGCTGACAAAGTAGAT...GCCTCCACCACCTCCCACGCTTCTGAGAAGAGGTTCCAAATTGGGCTTCTGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp TGGGAATGGTGCTGTGGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCAGCCTCCGCTGTCGTTaGAAATTGCAAGAGTTGGAT +
Preference number: 4 (lower is better)
Translates to: WEWCCGRSGHRSPIWNLFSLRCR*KLQELD
Trigger: ATCCAACTCTTGCAATTTGCAACGACAGCGGAGGCT...GAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACCATTCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp TCCAAGGCATGCTTCAGTTATACTGCAGCCTGGCCAACCACTGTTCCCTGTAGAAGACTGCTTCTCCTCTaGACTGTGTCCGGGAATGGA +
Preference number: 4 (lower is better)
Translates to: SKACFSYTAAWPTTVPCRRLLLL*TVSGNG
Trigger: TCCATTCCCGGACACAGTGCAGAGGAGAAGCAGTCT...TCTACAGGGAACAGTGGTTGGCCAGGCTGCAGTATAACTGAAGCATGCCTTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp CCCAATTTGGAACCTCTTCTCAGAAGCGTGGGAGGTGGTGGAGGCCAAGCCCACCAAAGTGCCTCACGTTaGTGCTGGTTCAAATTATGT +
Preference number: 4 (lower is better)
Translates to: PNLEPLLRSVGGGGGQAHQSASR*CWFKLC
Trigger: ACATAATTTGAACCAGCAGCAACGTGAGGCACTTTG...GTGGGCTTGGCCTCCACCACCTCCCACGCTTCTGAGAAGAGGTTCCAAATTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp GGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTCAGAAGCGTGGGAGTGGCGTCTCTTGTACTaGTGCAAACATATAGAGCAG +
Preference number: 4 (lower is better)
Translates to: GRSGHRSPIWNLFSEAWEWRLLY*CKHIEQ
Trigger: CTGCTCTATATGTTTGCAGCAGTACAAGAGACGCCA...CTCCCACGCTTCTGAGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp CCTGGCCAACCACTGTTCCCTGTAGAAGTTGAAGTTCCTCTGTATTATCCAGCACTACACTGGGAATGGTaGTGTGGACGCTCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: PGQPLFPVEVEVPLYYPALHWEW*CGRSGH
Trigger: GTGCCCAGAGCGTCCACAGCACCATTCCCAGTGTAG...TGCTGGATAATACAGAGGAACTTCAACTTCTACAGGGAACAGTGGTTGGCCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp GGGAATGGTGCTGTGGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTTGGCAGACTCTGGAATaGCATTTGTGTGAGTTCCAC +
Preference number: 4 (lower is better)
Translates to: GNGAVDALGTEAQFGTSSWQTLE*HLCEFH
Trigger: GTGGAACTCACACAAATGGCATTCCAGAGTCTGCCA...AGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACCATTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp GGTGCTGTGGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTCAGAAGTGGCAGACTCTGGAATaGCATTTGTGTGAGTTCCAC +
Preference number: 4 (lower is better)
Translates to: GAVDALGTEAQFGTSSQKWQTLE*HLCEFH
Trigger: GTGGAACTCACACAAATGGCATTCCAGAGTCTGCCA...CTTCTGAGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp GGTTTTAACATGAACACATTAAAGGGAGATGGCCCTGGCCCCCACAGTGTCTGCCTTCTTCGCTCGTCTTaGCACAGAGGCTCTGTTCCA +
Preference number: 4 (lower is better)
Translates to: GFNMNTLKGDGPGPHSVCLLRSS*HRGSVP
Trigger: TGGAACAGAGCCTCTGTGCCAAGACGAGCGAAGAAG...GCAGACACTGTGGGGGCCAGGGCCATCTCCCTTTAATGTGTTCATGTTAAAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp CCCCAGCTGCCTCGGGATCATCTCTGGTTCTCCTGGGCCAGGCTCCATGGAGTCGCAAATTGCAAGAGTTaGATCATCTGTAAACTTGAT +
Preference number: 4 (lower is better)
Translates to: PQLPRDHLWFSWARLHGVANCKS*IICKLD
Trigger: ATCAAGTTTACAGATGATCCAACTCTTGCAATTTGC...GACTCCATGGAGCCTGGCCCAGGAGAACCAGAGATGATCCCGAGGCAGCTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp ATCCAGCAGCTGGAGGAGACGGAGTATGGCAGACTCTGGAATGCCATTTGTGTGACCAAAGCCAGTGCCTaGCTAACATTTCCTCCAGTG +
Preference number: 4 (lower is better)
Translates to: IQQLEETEYGRLWNAICVTKASA*LTFPPV
Trigger: CACTGGAGGAAATGTTAGCCAGGCACTGGCTTTGGT...CACACAAATGGCATTCCAGAGTCTGCCATACTCCGTCTCCTCCAGCTGCTGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp CTCTCTCCAAGGCATGCTTCAGTTATACTGCAGCCTGGCCAACCACTGTTCCCTATATGTCCAGAAAAGTaGGTGGCAACCAGCTCCGCA +
Preference number: 4 (lower is better)
Translates to: LSPRHASVILQPGQPLFPICPEK*VATSSA
Trigger: TGCGGAGCTGGTTGCCACCCACTTTTCTGGACATAT...AGGGAACAGTGGTTGGCCAGGCTGCAGTATAACTGAAGCATGCCTTGGAGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp CCCAATTTGGAACCTCTTCTCAGAAGCGTGGGAGGTGGTGGAGGCCAAGCCCACATGAATACCTTCCCTTaGGTCAAGAAGACTCCTCAA +
Preference number: 4 (lower is better)
Translates to: PNLEPLLRSVGGGGGQAHMNTFP*VKKTPQ
Trigger: TTGAGGAGTCTTCTTGACCCAAGGGAAGGTATTCAT...GTGGGCTTGGCCTCCACCACCTCCCACGCTTCTGAGAAGAGGTTCCAAATTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp TGTATTATCCAGCAGCTGGAGGAGACGGAGTATGGCAGACTCTGGAATGCCATTGAGGAATGGCTGAACTaGACAGCTTCTGAGGGGCCA +
Preference number: 4 (lower is better)
Translates to: CIIQQLEETEYGRLWNAIEEWLN*TASEGP
Trigger: TGGCCCCTCAGAAGCTGTCCAGTTCAGCCATTCCTC...AATGGCATTCCAGAGTCTGCCATACTCCGTCTCCTCCAGCTGCTGGATAATACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp GGGAATGGTGCTGTGGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTTCATCAGCCATTTCTTaGCGTCTCTTGTACTGCTGC +
Preference number: 4 (lower is better)
Translates to: GNGAVDALGTEAQFGTSSSSAIS*RLLYCC
Trigger: GCAGCAGTACAAGAGACGCCAAGAAATGGCTGATGA...AGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACCATTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp TGTATTATCCAGCAGCTGGAGGAGACGGAGTATGGCAGACTCTGGAATGCCATTTCGCTGCTGCGATTCTaGGAGAGTTCCGTGAGGAGA +
Preference number: 4 (lower is better)
Translates to: CIIQQLEETEYGRLWNAISLLRF*ESSVRR
Trigger: TCTCCTCACGGAACTCTCCCAGAATCGCAGCAGCGA...AATGGCATTCCAGAGTCTGCCATACTCCGTCTCCTCCAGCTGCTGGATAATACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp GGGAATGGTGCTGTGGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTGGAATGAGCTGCAGCTaGAAGTTCTCATTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: GNGAVDALGTEAQFGTSSGMSCS*KFSFWK
Trigger: CTTCCAGAATGAGAACTTCCAGCTGCAGCTCATTCC...AGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACCATTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp TCCAAGGCATGCTTCAGTTATACTGCAGCCTGGCCAACCACTGTTCCCTGTAGAATCCTCAGTCACAGGTaGAGGAATGAGCTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: SKACFSYTAAWPTTVPCRILSHR*RNELQL
Trigger: CAGCTGCAGCTCATTCCTCCACCTGTGACTGAGGAT...TCTACAGGGAACAGTGGTTGGCCAGGCTGCAGTATAACTGAAGCATGCCTTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp CTCTCTCCAAGGCATGCTTCAGTTATACTGCAGCCTGGCCAACCACTGTTCCCTGCCATGACAGCAATGTaGAGAAGACTGGGAGTCTAC +
Preference number: 4 (lower is better)
Translates to: LSPRHASVILQPGQPLFPAMTAM*RRLGVY
Trigger: GTAGACTCCCAGTCTTCTCCACATTGCTGTCATGGC...AGGGAACAGTGGTTGGCCAGGCTGCAGTATAACTGAAGCATGCCTTGGAGAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp ACAGCAATGTGGAGAAGACTGGGAGTCTACACTGGGAATGGTGCTGTGGACGCTAGTTATACTGCAGCCTaGCCAACCACTGTTCCCTGT +
Preference number: 4 (lower is better)
Translates to: TAMWRRLGVYTGNGAVDASYTAA*PTTVPC
Trigger: ACAGGGAACAGTGGTTGGCCAGGCTGCAGTATAACT...AGCGTCCACAGCACCATTCCCAGTGTAGACTCCCAGTCTTCTCCACATTGCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp CCAGCAGCTGGAGGAGACGGAGTATGGCAGACTCTGGAATGCCATTTGTGTGAGTCACGAAGACCTGAATaGTTATCTCTGAGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: PAAGGDGVWQTLECHLCESRRPE*LSLSLL
Trigger: CAGCAAGCTCAGAGATAATCATTCAGGTCTTCGTGA...CTCACACAAATGGCATTCCAGAGTCTGCCATACTCCGTCTCCTCCAGCTGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp CCCAATTTGGAACCTCTTCTCAGAAGCGTGGGAGGTGGTGGAGGCCAAGCCCACCAATCAGATCATTTTTaGACTCCAGTTCCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: PNLEPLLRSVGGGGGQAHQSDHF*TPVPCP
Trigger: TGGACAAGGAACTGGAGTTCAAAAATGATCTGATTG...GTGGGCTTGGCCTCCACCACCTCCCACGCTTCTGAGAAGAGGTTCCAAATTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp TCCAAGGCATGCTTCAGTTATACTGCAGCCTGGCCAACCACTGTTCCCTGTAGAGAGATAGCGCCATACTaGCCTCCAACACTAGTGCTA +
Preference number: 4 (lower is better)
Translates to: SKACFSYTAAWPTTVPCREIAPY*PPTLVL
Trigger: TAGCACTAGTGTTGGAGGTCAGTATGGCGCTATCTC...TCTACAGGGAACAGTGGTTGGCCAGGCTGCAGTATAACTGAAGCATGCCTTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp GCACAGAAGCCCAATTTGGAACCTCTTCTCAGAAGCGTGGGAGGTGGTGGAGGCAACTGTGTGATGGGATaGTCTTTCAACTCAGGCTTA +
Preference number: 4 (lower is better)
Translates to: AQKPNLEPLLRSVGGGGGNCVMG*SFNSGL
Trigger: TAAGCCTGAGTTGAAAGATCATCCCATCACACAGTT...GCCTCCACCACCTCCCACGCTTCTGAGAAGAGGTTCCAAATTGGGCTTCTGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp TCCAAGGCATGCTTCAGTTATACTGCAGCCTGGCCAACCACTGTTCCCTGTAGAGACCAGCTGAACTTCTaGGATCTCCACTGTCTCCAA +
Preference number: 4 (lower is better)
Translates to: SKACFSYTAAWPTTVPCRDQLNF*DLHCLQ
Trigger: TTGGAGACAGTGGAGATCTCAGAAGTTCAGCTGGTC...TCTACAGGGAACAGTGGTTGGCCAGGCTGCAGTATAACTGAAGCATGCCTTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp CCAGCAGCTGGAGGAGACGGAGTATGGCAGACTCTGGAATGCCATTTGTGTGAGGACCACCATAGCTACTaGTGGATTGATAACAAGCCT +
Preference number: 4 (lower is better)
Translates to: PAAGGDGVWQTLECHLCEDHHSY*WIDNKP
Trigger: AGGCTTGTTATCAATCCATCAGTAGCTATGGTGGTC...CTCACACAAATGGCATTCCAGAGTCTGCCATACTCCGTCTCCTCCAGCTGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp GGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTCAGAAGCGTGGGAGTCATTACTTGGGGTGTaGTTCCCACCAATTTATCAC +
Preference number: 4 (lower is better)
Translates to: GRSGHRSPIWNLFSEAWESLLGV*FPPIYH
Trigger: GTGATAAATTGGTGGGAATCACACCCCAAGTAATGA...CTCCCACGCTTCTGAGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000625842.3
CDS-3UTR TCA 90 bp TCCAAGGCATGCTTCAGTTATACTGCAGCCTGGCCAACCACTGTTCCCTGTAGACGACTCTCTTCAAATTaGACTATGCCTCCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: SKACFSYTAAWPTTVPCRRLSSN*TMPPAC
Trigger: GCAGGCTGGAGGCATAGTTCAATTTGAAGAGAGTCG...TCTACAGGGAACAGTGGTTGGCCAGGCTGCAGTATAACTGAAGCATGCCTTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp CCCAATTTGGAACCTCTTCTCAGAAGCGTGGGAGGTGGTGGAGGCCAAGCCCACGATTCTTTGCAAGATTaGTGGAAGGGCAATAAATGC +
Preference number: 4 (lower is better)
Translates to: PNLEPLLRSVGGGGGQAHDSLQD*WKGNKC
Trigger: GCATTTATTGCCCTTCCATCAATCTTGCAAAGAATC...GTGGGCTTGGCCTCCACCACCTCCCACGCTTCTGAGAAGAGGTTCCAAATTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp CTCTCTCCAAGGCATGCTTCAGTTATACTGCAGCCTGGCCAACCACTGTTCCCTACTGGATACTGCAATTaGTGTAGGCAAGCCAGCATC +
Preference number: 4 (lower is better)
Translates to: LSPRHASVILQPGQPLFPTGYCN*CRQASI
Trigger: GATGCTGGCTTGCCTACAGCAATTGCAGTATCCAGT...AGGGAACAGTGGTTGGCCAGGCTGCAGTATAACTGAAGCATGCCTTGGAGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp GGGAATGGTGCTGTGGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTTATCAGACTGGATACTaGAATTGCTGTAGGCAAGCC +
Preference number: 4 (lower is better)
Translates to: GNGAVDALGTEAQFGTSSYQTGY*NCCRQA
Trigger: GGCTTGCCTACAGCAATTGCAGTATCCAGTCTGATA...AGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACCATTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp AATGGTGCTGTGGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTCAGAGCCTCCGCTGTCGTTaGAAATTGCAAGAGTTGGAT +
Preference number: 4 (lower is better)
Translates to: NGAVDALGTEAQFGTSSQSLRCR*KLQELD
Trigger: ATCCAACTCTTGCAATTTGCAACGACAGCGGAGGCT...CTGAGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp ACAGCAATGTGGAGAAGACTGGGAGTCTACACTGGGAATGGTGCTGTGGACGCTAGCCTCCGCTGTCGTTaGAAATTGCAAGAGTTGGAT +
Preference number: 4 (lower is better)
Translates to: TAMWRRLGVYTGNGAVDASLRCR*KLQELD
Trigger: ATCCAACTCTTGCAATTTGCAACGACAGCGGAGGCT...AGCGTCCACAGCACCATTCCCAGTGTAGACTCCCAGTCTTCTCCACATTGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp GGTGCTGTGGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTCAGAAGAACTCAGGCTTAGAATaGAGAGGCTCAATACAGCAG +
Preference number: 4 (lower is better)
Translates to: GAVDALGTEAQFGTSSQKNSGLE*RGSIQQ
Trigger: CTGCTGTATTGAGCCTCTGCATTCTAAGCCTGAGTT...CTTCTGAGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp TGGGAATGGTGCTGTGGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTGCCGATCAATCACATaGAACTTCTCTACGCTGTCT +
Preference number: 4 (lower is better)
Translates to: WEWCCGRSGHRSPIWNLFCRSIT*NFSTLS
Trigger: AGACAGCGTAGAGAAGTTGCATGTGATTGATCGGCA...GAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACCATTCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp CCAGCAGCTGGAGGAGACGGAGTATGGCAGACTCTGGAATGCCATTTGTGTGAGTGCCGATCAATCACATaGAACTTCTCTACGCTGTCT +
Preference number: 4 (lower is better)
Translates to: PAAGGDGVWQTLECHLCECRSIT*NFSTLS
Trigger: AGACAGCGTAGAGAAGTTGCATGTGATTGATCGGCA...CTCACACAAATGGCATTCCAGAGTCTGCCATACTCCGTCTCCTCCAGCTGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp TCCAAGGCATGCTTCAGTTATACTGCAGCCTGGCCAACCACTGTTCCCTGTAGATCCAACCAAAGCCAGTaGCTGGCTAACATTTCCTCC +
Preference number: 4 (lower is better)
Translates to: SKACFSYTAAWPTTVPCRSNQSQ*LANISS
Trigger: GGAGGAAATGTTAGCCAGGCACTGGCTTTGGTTGGA...TCTACAGGGAACAGTGGTTGGCCAGGCTGCAGTATAACTGAAGCATGCCTTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp GTGGAGAAGACTGGGAGTCTACACTGGGAATGGTGCTGTGGACGCTCTGGGCACTCCCACTACTGCTTTTaGTTTTCCTTCATGGAAAGA +
Preference number: 4 (lower is better)
Translates to: VEKTGSLHWEWCCGRSGHSHYCF*FSFMER
Trigger: TCTTTCCATGAAGGAAAAGCAAAAGCAGTAGTGGGA...GTGCCCAGAGCGTCCACAGCACCATTCCCAGTGTAGACTCCCAGTCTTCTCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp GGGAATGGTGCTGTGGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTTTCTACCATCCGGTCTaGAACAATAGCCTTTCGCTT +
Preference number: 4 (lower is better)
Translates to: GNGAVDALGTEAQFGTSSFYHPV*NNSLSL
Trigger: AAGCGAAAGGCTATTGTTGCAGACCGGATGGTAGAA...AGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACCATTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp GCACAGAAGCCCAATTTGGAACCTCTTCTCAGAAGCGTGGGAGGTGGTGGAGGCAATTCTAAAAGGACCTaGTGTCTTTCAGAGTGTCGG +
Preference number: 4 (lower is better)
Translates to: AQKPNLEPLLRSVGGGGGNSKRT*CLSECR
Trigger: CCGACACTCTGAAAGACAGCAGGTCCTTTTAGAATT...GCCTCCACCACCTCCCACGCTTCTGAGAAGAGGTTCCAAATTGGGCTTCTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp GGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTCAGAAGCGTGGGAGAATTCTAAAAGGACCTaGTGTCTTTCAGAGTGTCGG +
Preference number: 4 (lower is better)
Translates to: GRSGHRSPIWNLFSEAWENSKRT*CLSECR
Trigger: CCGACACTCTGAAAGACAGCAGGTCCTTTTAGAATT...CTCCCACGCTTCTGAGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp ATCCAGCAGCTGGAGGAGACGGAGTATGGCAGACTCTGGAATGCCATTTGTGTGTTCTGCCATACAGACTaGTTCTCCTCTGCACTGTGT +
Preference number: 4 (lower is better)
Translates to: IQQLEETEYGRLWNAICVFCHTD*FSSALC
Trigger: ACACAGTGCAGAGGAGAAGCAGTCTGTATGGCAGAA...CACACAAATGGCATTCCAGAGTCTGCCATACTCCGTCTCCTCCAGCTGCTGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp GTGGAGAAGACTGGGAGTCTACACTGGGAATGGTGCTGTGGACGCTCTGGGCACCTCAATATGATCCATTaGTTTCTGCCATACAGACTG +
Preference number: 4 (lower is better)
Translates to: VEKTGSLHWEWCCGRSGHLNMIH*FLPYRL
Trigger: CAGTCTGTATGGCAGAAAGCAATGGATCATATTGAG...GTGCCCAGAGCGTCCACAGCACCATTCCCAGTGTAGACTCCCAGTCTTCTCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp GGAGAAGACTGGGAGTCTACACTGGGAATGGTGCTGTGGACGCTCTGGGCACAGCTCAATATGATCCATTaGTTTCTGCCATACAGACTG +
Preference number: 4 (lower is better)
Translates to: GEDWESTLGMVLWTLWAQLNMIH*FLPYRL
Trigger: CAGTCTGTATGGCAGAAAGCAATGGATCATATTGAG...CTGTGCCCAGAGCGTCCACAGCACCATTCCCAGTGTAGACTCCCAGTCTTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp ACTGGGAGTCTACACTGGGAATGGTGCTGTGGACGCTCTGGGCACAGAAGCCCATCCTGTAAGATTCTTTaGAAGATTGATGGAAGGGCA +
Preference number: 4 (lower is better)
Translates to: TGSLHWEWCCGRSGHRSPSCKIL*KIDGRA
Trigger: TGCCCTTCCATCAATCTTGCAAAGAATCTTACAGGA...TGGGCTTCTGTGCCCAGAGCGTCCACAGCACCATTCCCAGTGTAGACTCCCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp GGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTCAGAAGCGTGGGAGTCAAATGCTTGGATTTaGTGTGGATCCAGAACAGGT +
Preference number: 4 (lower is better)
Translates to: GRSGHRSPIWNLFSEAWESNAWI*CGSRTG
Trigger: ACCTGTTCTGGATCCACAGCAAATCCAAGCATTTGA...CTCCCACGCTTCTGAGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp CAACCACTGTTCCCTGTAGAAGTTGAAGTTCCTCTGTATTATCCAGCAGCTGGACTACACTGGGAATGGTaGTGTGGACGCTCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: QPLFPVEVEVPLYYPAAGLHWEW*CGRSGH
Trigger: GTGCCCAGAGCGTCCACAGCACCATTCCCAGTGTAG...TCCAGCTGCTGGATAATACAGAGGAACTTCAACTTCTACAGGGAACAGTGGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp CTCTCTCCAAGGCATGCTTCAGTTATACTGCAGCCTGGCCAACCACTGTTCCCTATGCTTCAGTTATACTaGAGCCTGGCCAACCACTGT +
Preference number: 4 (lower is better)
Translates to: LSPRHASVILQPGQPLFPMLQLY*SLANHC
Trigger: ACAGTGGTTGGCCAGGCTGCAGTATAACTGAAGCAT...AGGGAACAGTGGTTGGCCAGGCTGCAGTATAACTGAAGCATGCCTTGGAGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp ACTGGGAGTCTACACTGGGAATGGTGCTGTGGACGCTCTGGGCACAGAAGCCCACCATACTTTCAAGGATaGTTTCAATCCAATGACCAG +
Preference number: 4 (lower is better)
Translates to: TGSLHWEWCCGRSGHRSPPYFQG*FQSNDQ
Trigger: CTGGTCATTGGATTGAAACCATCCTTGAAAGTATGG...TGGGCTTCTGTGCCCAGAGCGTCCACAGCACCATTCCCAGTGTAGACTCCCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp TCCAAGGCATGCTTCAGTTATACTGCAGCCTGGCCAACCACTGTTCCCTGTAGAACCAAAGCCAGTGCCTaGCTAACATTTCCTCCAGTG +
Preference number: 4 (lower is better)
Translates to: SKACFSYTAAWPTTVPCRTKASA*LTFPPV
Trigger: CACTGGAGGAAATGTTAGCCAGGCACTGGCTTTGGT...TCTACAGGGAACAGTGGTTGGCCAGGCTGCAGTATAACTGAAGCATGCCTTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp CCCAATTTGGAACCTCTTCTCAGAAGCGTGGGAGGTGGTGGAGGCCAAGCCCACACTTGGATTTTTCCTTaGTCTGGGCACTTTTTCAGA +
Preference number: 4 (lower is better)
Translates to: PNLEPLLRSVGGGGGQAHTWIFP*SGHFFR
Trigger: TCTGAAAAAGTGCCCAGACCAAGGAAAAATCCAAGT...GTGGGCTTGGCCTCCACCACCTCCCACGCTTCTGAGAAGAGGTTCCAAATTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp CCTGGCCAACCACTGTTCCCTGTAGAAGTTGAAGTTCCTCTGTATTATCCAGCAGTCCAGAAAAGTGGGTaGCAACCAGCTCCGCAGCTT +
Preference number: 4 (lower is better)
Translates to: PGQPLFPVEVEVPLYYPAVQKSG*QPAPQL
Trigger: AAGCTGCGGAGCTGGTTGCCACCCACTTTTCTGGAC...TGCTGGATAATACAGAGGAACTTCAACTTCTACAGGGAACAGTGGTTGGCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp GCACAGAAGCCCAATTTGGAACCTCTTCTCAGAAGCGTGGGAGGTGGTGGAGGCCTCTATAACTTGGGTTaGGTTGAACTGACACAACAG +
Preference number: 4 (lower is better)
Translates to: AQKPNLEPLLRSVGGGGGLYNLG*VELTQQ
Trigger: CTGTTGTGTCAGTTCAACCCAACCCAAGTTATAGAG...GCCTCCACCACCTCCCACGCTTCTGAGAAGAGGTTCCAAATTGGGCTTCTGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp GGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTCAGAAGCGTGGGAGCCCAAGATAAGTCCCTaGATTTCTCCAAGTTTTCCT +
Preference number: 4 (lower is better)
Translates to: GRSGHRSPIWNLFSEAWEPKISP*ISPSFP
Trigger: AGGAAAACTTGGAGAAATCCAGGGACTTATCTTGGG...CTCCCACGCTTCTGAGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp GCACAGAAGCCCAATTTGGAACCTCTTCTCAGAAGCGTGGGAGGTGGTGGAGGCGACCAATGGAGATCTTaGTTTAGAAGGCTGGTTGTT +
Preference number: 4 (lower is better)
Translates to: AQKPNLEPLLRSVGGGGGDQWRS*FRRLVV
Trigger: AACAACCAGCCTTCTAAACCAAGATCTCCATTGGTC...GCCTCCACCACCTCCCACGCTTCTGAGAAGAGGTTCCAAATTGGGCTTCTGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp GGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTCAGAAGCGTGGGAGGACCAATGGAGATCTTaGTTTAGAAGGCTGGTTGTT +
Preference number: 4 (lower is better)
Translates to: GRSGHRSPIWNLFSEAWEDQWRS*FRRLVV
Trigger: AACAACCAGCCTTCTAAACCAAGATCTCCATTGGTC...CTCCCACGCTTCTGAGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp CAATGTGGAGAAGACTGGGAGTCTACACTGGGAATGGTGCTGTGGACGCTCTGGCATGTCCATCTTGTTTaGCCCTCAAATTCCACAGTG +
Preference number: 4 (lower is better)
Translates to: QCGEDWESTLGMVLWTLWHVHLV*PSNSTV
Trigger: CACTGTGGAATTTGAGGGCCAAACAAGATGGACATG...CCAGAGCGTCCACAGCACCATTCCCAGTGTAGACTCCCAGTCTTCTCCACATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp TCCAAGGCATGCTTCAGTTATACTGCAGCCTGGCCAACCACTGTTCCCTGTAGACAGTGGGATCCCCTTTaGACTGATGATACGATGGAG +
Preference number: 4 (lower is better)
Translates to: SKACFSYTAAWPTTVPCRQWDPL*TDDTME
Trigger: CTCCATCGTATCATCAGTCCAAAGGGGATCCCACTG...TCTACAGGGAACAGTGGTTGGCCAGGCTGCAGTATAACTGAAGCATGCCTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp CTGCAGCCTGGCCAACCACTGTTCCCTGTAGAAGTTGAAGTTCCTCTGTATTATCTGCGAGCCACTGAATaGCCTATAGCTCTCGCTGCT +
Preference number: 4 (lower is better)
Translates to: LQPGQPLFPVEVEVPLYYLRATE*PIALAA
Trigger: AGCAGCGAGAGCTATAGGCCATTCAGTGGCTCGCAG...ATAATACAGAGGAACTTCAACTTCTACAGGGAACAGTGGTTGGCCAGGCTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp GTGGAGAAGACTGGGAGTCTACACTGGGAATGGTGCTGTGGACGCTCTGGGCACTGGAAGTTCTCATTCTaGAAGATGCTGTTGAAAGCA +
Preference number: 4 (lower is better)
Translates to: VEKTGSLHWEWCCGRSGHWKFSF*KMLLKA
Trigger: TGCTTTCAACAGCATCTTCCAGAATGAGAACTTCCA...GTGCCCAGAGCGTCCACAGCACCATTCCCAGTGTAGACTCCCAGTCTTCTCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp CCTGGCCAACCACTGTTCCCTGTAGAAGTTGAAGTTCCTCTGTATTATCCAGCAGTGCTGTGGACGCTCTaGGCACAGAAGCCCAATTTG +
Preference number: 4 (lower is better)
Translates to: PGQPLFPVEVEVPLYYPAVLWTL*AQKPNL
Trigger: CAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCAC...TGCTGGATAATACAGAGGAACTTCAACTTCTACAGGGAACAGTGGTTGGCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp CTGCAGCCTGGCCAACCACTGTTCCCTGTAGAAGTTGAAGTTCCTCTGTATTATAGTCTACACTGGGAATaGTGCTGTGGACGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: LQPGQPLFPVEVEVPLYYSLHWE*CCGRSG
Trigger: CCCAGAGCGTCCACAGCACCATTCCCAGTGTAGACT...ATAATACAGAGGAACTTCAACTTCTACAGGGAACAGTGGTTGGCCAGGCTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp CTGCAGCCTGGCCAACCACTGTTCCCTGTAGAAGTTGAAGTTCCTCTGTATTATACTGGGAGTCTACACTaGGAATGGTGCTGTGGACGC +
Preference number: 4 (lower is better)
Translates to: LQPGQPLFPVEVEVPLYYTGSLH*EWCCGR
Trigger: GCGTCCACAGCACCATTCCCAGTGTAGACTCCCAGT...ATAATACAGAGGAACTTCAACTTCTACAGGGAACAGTGGTTGGCCAGGCTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp AATGGTGCTGTGGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTCAGCAATGTGGAGAAGACTaGGAGTCTACACTGGGAATG +
Preference number: 4 (lower is better)
Translates to: NGAVDALGTEAQFGTSSQQCGED*ESTLGM
Trigger: CATTCCCAGTGTAGACTCCCAGTCTTCTCCACATTG...CTGAGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp TGGGAATGGTGCTGTGGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCGAGTATGGCAGACTCTaGAATGCCATTTGTGTGAGT +
Preference number: 4 (lower is better)
Translates to: WEWCCGRSGHRSPIWNLFEYGRL*NAICVS
Trigger: ACTCACACAAATGGCATTCCAGAGTCTGCCATACTC...GAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACCATTCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp CCTGGCCAACCACTGTTCCCTGTAGAAGTTGAAGTTCCTCTGTATTATCCAGCACACATTAAAGGGAGATaGCCCTGGCCCCCACAGTGT +
Preference number: 4 (lower is better)
Translates to: PGQPLFPVEVEVPLYYPAHIKGR*PWPPQC
Trigger: ACACTGTGGGGGCCAGGGCCATCTCCCTTTAATGTG...TGCTGGATAATACAGAGGAACTTCAACTTCTACAGGGAACAGTGGTTGGCCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
3UTR CAA 72 bp GGAGGAGACGGAGTATGGCAGACTCTGGAATGCCATTaGTGTGAGTTCCACCTACTTTCTAGGCTTCAGGGT +
Preference number: 4 (lower is better)
Translates to: GGDGVWQTLECH*CEFHLLSRLQG
Trigger: ACCCTGAAGCCTAGAAAGTAGGTGGAACTCACACAAATGGCATTCCAGAGTCTGCCATACTCCGTCTCCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp GCACAGAAGCCCAATTTGGAACCTCTTCTCAGAAGCGTGGGAGGTGGTGGAGGCCAATCAGATCATTTTTaGACTCCAGTTCCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: AQKPNLEPLLRSVGGGGGQSDHF*TPVPCP
Trigger: TGGACAAGGAACTGGAGTTCAAAAATGATCTGATTG...GCCTCCACCACCTCCCACGCTTCTGAGAAGAGGTTCCAAATTGGGCTTCTGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp GGGAATGGTGCTGTGGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTGGAGGAGTATCAACTTaGGGAATATCAAACTCCTTG +
Preference number: 4 (lower is better)
Translates to: GNGAVDALGTEAQFGTSSGGVST*GISNSL
Trigger: CAAGGAGTTTGATATTCCTCAAGTTGATACTCCTCC...AGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACCATTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp CAATGTGGAGAAGACTGGGAGTCTACACTGGGAATGGTGCTGTGGACGCTCTGGATTAAAGCCAATCCATaGGATGTACCCACTGCTATC +
Preference number: 4 (lower is better)
Translates to: QCGEDWESTLGMVLWTLWIKANP*DVPTAI
Trigger: GATAGCAGTGGGTACATCTCATGGATTGGCTTTAAT...CCAGAGCGTCCACAGCACCATTCCCAGTGTAGACTCCCAGTCTTCTCCACATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp AATGGTGCTGTGGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTCAGGCTGTTCCTGGAGGATaGGCATCTGTTATTGATCTT +
Preference number: 4 (lower is better)
Translates to: NGAVDALGTEAQFGTSSQAVPGG*ASVIDL
Trigger: AAGATCAATAACAGATGCTCATCCTCCAGGAACAGC...CTGAGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp GGGAATGGTGCTGTGGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTAACTGTGTGATGGGATaGTCTTTCAACTCAGGCTTA +
Preference number: 4 (lower is better)
Translates to: GNGAVDALGTEAQFGTSSNCVMG*SFNSGL
Trigger: TAAGCCTGAGTTGAAAGATCATCCCATCACACAGTT...AGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACCATTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp GTGGAGAAGACTGGGAGTCTACACTGGGAATGGTGCTGTGGACGCTCTGGGCACATGGTTTCAATCCAATaGCCAGTATTTTTGTCAAGG +
Preference number: 4 (lower is better)
Translates to: VEKTGSLHWEWCCGRSGHMVSIQ*PVFLSR
Trigger: CCTTGACAAAAATACTGGTCATTGGATTGAAACCAT...GTGCCCAGAGCGTCCACAGCACCATTCCCAGTGTAGACTCCCAGTCTTCTCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp GGTGCTGTGGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTCAGAAGGAGCACAACTGTGCGTaGATTTATCCAGGTAAAGTT +
Preference number: 4 (lower is better)
Translates to: GAVDALGTEAQFGTSSQKEHNCA*IYPGKV
Trigger: AACTTTACCTGGATAAATTCACGCACAGTTGTGCTC...CTTCTGAGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp CAATGTGGAGAAGACTGGGAGTCTACACTGGGAATGGTGCTGTGGACGCTCTGGGAGCACAACTGTGCGTaGATTTATCCAGGTAAAGTT +
Preference number: 4 (lower is better)
Translates to: QCGEDWESTLGMVLWTLWEHNCA*IYPGKV
Trigger: AACTTTACCTGGATAAATTCACGCACAGTTGTGCTC...CCAGAGCGTCCACAGCACCATTCCCAGTGTAGACTCCCAGTCTTCTCCACATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp TGTATTATCCAGCAGCTGGAGGAGACGGAGTATGGCAGACTCTGGAATGCCATTGACCAGCTGAACTTCTaGGATCTCCACTGTCTCCAA +
Preference number: 4 (lower is better)
Translates to: CIIQQLEETEYGRLWNAIDQLNF*DLHCLQ
Trigger: TTGGAGACAGTGGAGATCTCAGAAGTTCAGCTGGTC...AATGGCATTCCAGAGTCTGCCATACTCCGTCTCCTCCAGCTGCTGGATAATACA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp GGTGCTGTGGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTCAGAAGCAGTGGCTAGTGATTTaGAATGGCTGCTATTGTAGA +
Preference number: 4 (lower is better)
Translates to: GAVDALGTEAQFGTSSQKQWLVI*NGCYCR
Trigger: TCTACAATAGCAGCCATTTCAAATCACTAGCCACTG...CTTCTGAGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp TGGGAATGGTGCTGTGGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCCAGTGGCTAGTGATTTaGAATGGCTGCTATTGTAGA +
Preference number: 4 (lower is better)
Translates to: WEWCCGRSGHRSPIWNLFQWLVI*NGCYCR
Trigger: TCTACAATAGCAGCCATTTCAAATCACTAGCCACTG...GAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACCATTCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp ATCCAGCAGCTGGAGGAGACGGAGTATGGCAGACTCTGGAATGCCATTTGTGTGGGCAGTAATCAACTATaGCAGGCACCATATCCTGAA +
Preference number: 4 (lower is better)
Translates to: IQQLEETEYGRLWNAICVGSNQL*QAPYPE
Trigger: TTCAGGATATGGTGCCTGTCATAGTTGATTACTGCC...CACACAAATGGCATTCCAGAGTCTGCCATACTCCGTCTCCTCCAGCTGCTGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000625842.3
CDS-3UTR TCA 90 bp GGGAATGGTGCTGTGGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTATGAGAACTACCTGCTaGATATCTAGGCTGGTGATA +
Preference number: 4 (lower is better)
Translates to: GNGAVDALGTEAQFGTSSMRTTC*ISRLVI
Trigger: TATCACCAGCCTAGATATTCAGCAGGTAGTTCTCAT...AGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACCATTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000625842.3
CDS-3UTR TCA 90 bp CAATGTGGAGAAGACTGGGAGTCTACACTGGGAATGGTGCTGTGGACGCTCTGGATGAGAACTACCTGCTaGATATCTAGGCTGGTGATA +
Preference number: 4 (lower is better)
Translates to: QCGEDWESTLGMVLWTLWMRTTC*ISRLVI
Trigger: TATCACCAGCCTAGATATTCAGCAGGTAGTTCTCAT...CCAGAGCGTCCACAGCACCATTCCCAGTGTAGACTCCCAGTCTTCTCCACATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000625842.3
CDS-3UTR TCA 90 bp GGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTCAGAAGCGTGGGAGGATTTTCCCAACACATaGGAACTACCTGCTGAATAT +
Preference number: 4 (lower is better)
Translates to: GRSGHRSPIWNLFSEAWEDFPNT*ELPAEY
Trigger: ATATTCAGCAGGTAGTTCTCATGTGTTGGGAAAATC...CTCCCACGCTTCTGAGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000625842.3
CDS-3UTR TCA 90 bp TATTATCCAGCAGCTGGAGGAGACGGAGTATGGCAGACTCTGGAATGCCATTTGCGACTCTCTTCAAATTaGACTATGCCTCCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: YYPAAGGDGVWQTLECHLRLSSN*TMPPAC
Trigger: GCAGGCTGGAGGCATAGTTCAATTTGAAGAGAGTCG...CAAATGGCATTCCAGAGTCTGCCATACTCCGTCTCCTCCAGCTGCTGGATAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp ATCCAGCAGCTGGAGGAGACGGAGTATGGCAGACTCTGGAATGCCATTTGTGTGTTTCTGCCATCCGGATaGGTCGACTCTCTTCAAATT +
Preference number: 4 (lower is better)
Translates to: IQQLEETEYGRLWNAICVFLPSG*VDSLQI
Trigger: AATTTGAAGAGAGTCGACTCATCCGGATGGCAGAAA...CACACAAATGGCATTCCAGAGTCTGCCATACTCCGTCTCCTCCAGCTGCTGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp CCAGCAGCTGGAGGAGACGGAGTATGGCAGACTCTGGAATGCCATTTGTGTGAGACGAGTTCCTCAATATaGTCCATTGCTTTCTGCCAT +
Preference number: 4 (lower is better)
Translates to: PAAGGDGVWQTLECHLCETSSSI*SIAFCH
Trigger: ATGGCAGAAAGCAATGGATCATATTGAGGAACTCGT...CTCACACAAATGGCATTCCAGAGTCTGCCATACTCCGTCTCCTCCAGCTGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp GGTGCTGTGGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTCAGAAGACGAGTTCCTCAATATaGTCCATTGCTTTCTGCCAT +
Preference number: 4 (lower is better)
Translates to: GAVDALGTEAQFGTSSQKTSSSI*SIAFCH
Trigger: ATGGCAGAAAGCAATGGATCATATTGAGGAACTCGT...CTTCTGAGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp GGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTCAGAAGCGTGGGAGCCAATAGATAAGCGGTaGCTTCATGAAGTTGATACT +
Preference number: 4 (lower is better)
Translates to: GRSGHRSPIWNLFSEAWEPIDKR*LHEVDT
Trigger: AGTATCAACTTCATGAAGTCACCGCTTATCTATTGG...CTCCCACGCTTCTGAGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp GGGAATGGTGCTGTGGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTTCTCAGGTTACACAATaGCCAATGGAGATCTTGGTT +
Preference number: 4 (lower is better)
Translates to: GNGAVDALGTEAQFGTSSSQVTQ*PMEILV
Trigger: AACCAAGATCTCCATTGGTCATTGTGTAACCTGAGA...AGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACCATTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp ATCCAGCAGCTGGAGGAGACGGAGTATGGCAGACTCTGGAATGCCATTTGTGTGTGTAGGCAGAATGAGTaGTACAAATGGCCACAGCTA +
Preference number: 4 (lower is better)
Translates to: IQQLEETEYGRLWNAICVCRQNE*YKWPQL
Trigger: TAGCTGTGGCCATTTGTATCACTCATTCTGCCTACA...CACACAAATGGCATTCCAGAGTCTGCCATACTCCGTCTCCTCCAGCTGCTGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp ACAGCAATGTGGAGAAGACTGGGAGTCTACACTGGGAATGGTGCTGTGGACGCTTGTAGGCAGAATGAGTaGTACAAATGGCCACAGCTA +
Preference number: 4 (lower is better)
Translates to: TAMWRRLGVYTGNGAVDACRQNE*YKWPQL
Trigger: TAGCTGTGGCCATTTGTATCACTCATTCTGCCTACA...AGCGTCCACAGCACCATTCCCAGTGTAGACTCCCAGTCTTCTCCACATTGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp AATGGTGCTGTGGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTCAGTGTAGGCAGAATGAGTaGTACAAATGGCCACAGCTA +
Preference number: 4 (lower is better)
Translates to: NGAVDALGTEAQFGTSSQCRQNE*YKWPQL
Trigger: TAGCTGTGGCCATTTGTATCACTCATTCTGCCTACA...CTGAGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp TGGGAATGGTGCTGTGGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCAGACATTTTTACCTGTaGTGGGGTTATCCTTCCCTT +
Preference number: 4 (lower is better)
Translates to: WEWCCGRSGHRSPIWNLFRHFYL*WGYPSL
Trigger: AAGGGAAGGATAACCCCATCACAGGTAAAAATGTCT...GAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACCATTCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp CCTGGCCAACCACTGTTCCCTGTAGAAGTTGAAGTTCCTCTGTATTATCCAGCATCTGGAAGATGCTGTTaGAAGCAGGAGCACTCTGCG +
Preference number: 4 (lower is better)
Translates to: PGQPLFPVEVEVPLYYPASGRCC*KQEHSA
Trigger: CGCAGAGTGCTCCTGCTTTCAACAGCATCTTCCAGA...TGCTGGATAATACAGAGGAACTTCAACTTCTACAGGGAACAGTGGTTGGCCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp GAATACCCATTACTGGAAGGTGATTCAGAATCAAAAATCCCCACCACCAACAACACTCCTCAACTCAGGTaGTCCACCTGCCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: EYPLLEGDSESKIPTTNNTPQLR*STCLGL
Trigger: GAGGCCGAGGCAGGTGGATCACCTGAGTTGAGGAGT...GTTGTTGGTGGTGGGGATTTTTGATTCTGAATCACCTTCCAGTAATGGGTATTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424463.4
CDS-3UTR GCA 90 bp AATGGTGCTGTGGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTCAGTATCAGACTGGATACTaGAATTGCTGTAGGCAAGCC +
Preference number: 4 (lower is better)
Translates to: NGAVDALGTEAQFGTSSQYQTGY*NCCRQA
Trigger: GGCTTGCCTACAGCAATTGCAGTATCCAGTCTGATA...CTGAGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp CAGTGTCTGCTCTCTCCAAGGCATGCTTCAGTTATACTGCAGCCTGGCCAACCAATGAGATGTACCCACTaGTATCAGACTGGATACTGC +
Preference number: 4 (lower is better)
Translates to: QCLLSPRHASVILQPGQPMRCTH*YQTGYC
Trigger: GCAGTATCCAGTCTGATAGCAGTGGGTACATCTCAT...TGGTTGGCCAGGCTGCAGTATAACTGAAGCATGCCTTGGAGAGAGCAGACACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp CCAGCAGCTGGAGGAGACGGAGTATGGCAGACTCTGGAATGCCATTTGTGTGAGGCTGTCGTTGCAAATTaGAAGAGTTGGATCATCTGT +
Preference number: 4 (lower is better)
Translates to: PAAGGDGVWQTLECHLCEAVVAN*KSWIIC
Trigger: ACAGATGATCCAACTCTTGCAATTTGCAACGACAGC...CTCACACAAATGGCATTCCAGAGTCTGCCATACTCCGTCTCCTCCAGCTGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp CCTGGCCAACCACTGTTCCCTGTAGAAGTTGAAGTTCCTCTGTATTATCCAGCATGTACTGCTACAAAGTaGCAGGCCAGCAGTGGCACA +
Preference number: 4 (lower is better)
Translates to: PGQPLFPVEVEVPLYYPACTATK*QASSGT
Trigger: TGTGCCACTGCTGGCCTGGCACTTTGTAGCAGTACA...TGCTGGATAATACAGAGGAACTTCAACTTCTACAGGGAACAGTGGTTGGCCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp AATGGTGCTGTGGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTCAGTTCTACCATCCGGTCTaGAACAATAGCCTTTCGCTT +
Preference number: 4 (lower is better)
Translates to: NGAVDALGTEAQFGTSSQFYHPV*NNSLSL
Trigger: AAGCGAAAGGCTATTGTTGCAGACCGGATGGTAGAA...CTGAGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp TATTATCCAGCAGCTGGAGGAGACGGAGTATGGCAGACTCTGGAATGCCATTTGTCAGGCTTTGCAAGCTaGCGAGCAAGGAAGGTAAAG +
Preference number: 4 (lower is better)
Translates to: YYPAAGGDGVWQTLECHLSGFAS*RARKVK
Trigger: CTTTACCTTCCTTGCTCGGCAGCTTGCAAAGCCTGA...CAAATGGCATTCCAGAGTCTGCCATACTCCGTCTCCTCCAGCTGCTGGATAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp CTGCAGCCTGGCCAACCACTGTTCCCTGTAGAAGTTGAAGTTCCTCTGTATTATGGTGTTGTCAGGCTTTaGAAGCTGCCGAGCAAGGAA +
Preference number: 4 (lower is better)
Translates to: LQPGQPLFPVEVEVPLYYGVVRL*KLPSKE
Trigger: TTCCTTGCTCGGCAGCTTGCAAAGCCTGACAACACC...ATAATACAGAGGAACTTCAACTTCTACAGGGAACAGTGGTTGGCCAGGCTGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp CCAGCAGCTGGAGGAGACGGAGTATGGCAGACTCTGGAATGCCATTTGTGTGAGCTTCAAATTGAACTATaGCTCCAGCCTGCAGCAATT +
Preference number: 4 (lower is better)
Translates to: PAAGGDGVWQTLECHLCELQIEL*LQPAAI
Trigger: AATTGCTGCAGGCTGGAGGCATAGTTCAATTTGAAG...CTCACACAAATGGCATTCCAGAGTCTGCCATACTCCGTCTCCTCCAGCTGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp GGGAATGGTGCTGTGGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTAGTGCCTCACGTTGCTaGTGGTTCAAATTATGTGAA +
Preference number: 4 (lower is better)
Translates to: GNGAVDALGTEAQFGTSSSASRC*WFKLCE
Trigger: TTCACATAATTTGAACCAGCAGCAACGTGAGGCACT...AGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACCATTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp GGTGCTGTGGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTCAGAAGTCAAATGCTTGGATTTaGTGTGGATCCAGAACAGGT +
Preference number: 4 (lower is better)
Translates to: GAVDALGTEAQFGTSSQKSNAWI*CGSRTG
Trigger: ACCTGTTCTGGATCCACAGCAAATCCAAGCATTTGA...CTTCTGAGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp ATAGGTTTTAACATGAACACATTAAAGGGAGATGGCCCTGGCCCCCACAGTGTCTATAGCTCTCGCTGCTaGGATTCTGGGAGAGTTCCG +
Preference number: 4 (lower is better)
Translates to: IGFNMNTLKGDGPGPHSVYSSRC*DSGRVP
Trigger: CGGAACTCTCCCAGAATCGCAGCAGCGAGAGCTATA...GACACTGTGGGGGCCAGGGCCATCTCCCTTTAATGTGTTCATGTTAAAACCTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp GCACAGAAGCCCAATTTGGAACCTCTTCTCAGAAGCGTGGGAGGTGGTGGAGGCTGCAGAAGGCAAGCATaGGATTCACGTAATTTTGTA +
Preference number: 4 (lower is better)
Translates to: AQKPNLEPLLRSVGGGGGCRRQA*DSRNFV
Trigger: TACAAAATTACGTGAATCCCATGCTTGCCTTCTGCA...GCCTCCACCACCTCCCACGCTTCTGAGAAGAGGTTCCAAATTGGGCTTCTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp GGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTCAGAAGCGTGGGAGTGCAGAAGGCAAGCATaGGATTCACGTAATTTTGTA +
Preference number: 4 (lower is better)
Translates to: GRSGHRSPIWNLFSEAWECRRQA*DSRNFV
Trigger: TACAAAATTACGTGAATCCCATGCTTGCCTTCTGCA...CTCCCACGCTTCTGAGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp GGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTCAGAAGCGTGGGAGAAGTCTTTCATTACTTaGGGTGTGATTCCCACCAAT +
Preference number: 4 (lower is better)
Translates to: GRSGHRSPIWNLFSEAWEKSFIT*GVIPTN
Trigger: ATTGGTGGGAATCACACCCCAAGTAATGAAAGACTT...CTCCCACGCTTCTGAGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000625842.3
CDS-3UTR CCA 90 bp TGGGAATGGTGCTGTGGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCATGAATACCTTCCCTTaGGTCAAGAAGACTCCTCAA +
Preference number: 4 (lower is better)
Translates to: WEWCCGRSGHRSPIWNLFMNTFP*VKKTPQ
Trigger: TTGAGGAGTCTTCTTGACCCAAGGGAAGGTATTCAT...GAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACCATTCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp GGTGCTGTGGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTCAGAAGATGAATACCTTCCCTTaGGTCAAGAAGACTCCTCAA +
Preference number: 4 (lower is better)
Translates to: GAVDALGTEAQFGTSSQKMNTFP*VKKTPQ
Trigger: TTGAGGAGTCTTCTTGACCCAAGGGAAGGTATTCAT...CTTCTGAGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp GGTGCTGTGGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTCAGAAGCTCTATAACTTGGGTTaGGTTGAACTGACACAACAG +
Preference number: 4 (lower is better)
Translates to: GAVDALGTEAQFGTSSQKLYNLG*VELTQQ
Trigger: CTGTTGTGTCAGTTCAACCCAACCCAAGTTATAGAG...CTTCTGAGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp GGGAATGGTGCTGTGGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTCTCTATAACTTGGGTTaGGTTGAACTGACACAACAG +
Preference number: 4 (lower is better)
Translates to: GNGAVDALGTEAQFGTSSLYNLG*VELTQQ
Trigger: CTGTTGTGTCAGTTCAACCCAACCCAAGTTATAGAG...AGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACCATTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp TGGGAATGGTGCTGTGGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCCCCAAGATAAGTCCCTaGATTTCTCCAAGTTTTCCT +
Preference number: 4 (lower is better)
Translates to: WEWCCGRSGHRSPIWNLFPKISP*ISPSFP
Trigger: AGGAAAACTTGGAGAAATCCAGGGACTTATCTTGGG...GAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACCATTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp TCCAAGGCATGCTTCAGTTATACTGCAGCCTGGCCAACCACTGTTCCCTGTAGACTTGGTTTAGAAGGCTaGTTGTTGTTTCCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: SKACFSYTAAWPTTVPCRLGLEG*LLFPAG
Trigger: CCCTGCTGGAAACAACAACCAGCCTTCTAAACCAAG...TCTACAGGGAACAGTGGTTGGCCAGGCTGCAGTATAACTGAAGCATGCCTTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp GGTTTTAACATGAACACATTAAAGGGAGATGGCCCTGGCCCCCACAGTGTCTGCTCATCAGCCATTTCTTaGCGTCTCTTGTACTGCTGC +
Preference number: 4 (lower is better)
Translates to: GFNMNTLKGDGPGPHSVCSSAIS*RLLYCC
Trigger: GCAGCAGTACAAGAGACGCCAAGAAATGGCTGATGA...GCAGACACTGTGGGGGCCAGGGCCATCTCCCTTTAATGTGTTCATGTTAAAACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp GGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTCAGAAGCGTGGGAGTGGAAGTTCTCATTCTaGAAGATGCTGTTGAAAGCA +
Preference number: 4 (lower is better)
Translates to: GRSGHRSPIWNLFSEAWEWKFSF*KMLLKA
Trigger: TGCTTTCAACAGCATCTTCCAGAATGAGAACTTCCA...CTCCCACGCTTCTGAGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp CTCTCTCCAAGGCATGCTTCAGTTATACTGCAGCCTGGCCAACCACTGTTCCCTGAGTATGGCAGACTCTaGAATGCCATTTGTGTGAGT +
Preference number: 4 (lower is better)
Translates to: LSPRHASVILQPGQPLFPEYGRL*NAICVS
Trigger: ACTCACACAAATGGCATTCCAGAGTCTGCCATACTC...AGGGAACAGTGGTTGGCCAGGCTGCAGTATAACTGAAGCATGCCTTGGAGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp CCTGGCCAACCACTGTTCCCTGTAGAAGTTGAAGTTCCTCTGTATTATCCAGCAGGAGGAGACGGAGTATaGCAGACTCTGGAATGCCAT +
Preference number: 4 (lower is better)
Translates to: PGQPLFPVEVEVPLYYPAGGDGV*QTLECH
Trigger: ATGGCATTCCAGAGTCTGCCATACTCCGTCTCCTCC...TGCTGGATAATACAGAGGAACTTCAACTTCTACAGGGAACAGTGGTTGGCCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp CCAGATCTTCAGGGATGTCACCAAGGGGATAGGCACGACCTGCTAGACAACAGCCTGAAAGGACTAGGATaGGGTTTTGACTCATCTGAA +
Preference number: 4 (lower is better)
Translates to: PDLQGCHQGDRHDLLDNSLKGLG*GFDSSE
Trigger: TTCAGATGAGTCAAAACCCCATCCTAGTCCTTTCAG...GCTGTTGTCTAGCAGGTCGTGCCTATCCCCTTGGTGACATCCCTGAAGATCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458721.5
CDS-3UTR TCA 90 bp GGTGCTGTGGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTCAGAAGCAATCAGATCATTTTTaGACTCCAGTTCCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: GAVDALGTEAQFGTSSQKQSDHF*TPVPCP
Trigger: TGGACAAGGAACTGGAGTTCAAAAATGATCTGATTG...CTTCTGAGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp ATCCAGCAGCTGGAGGAGACGGAGTATGGCAGACTCTGGAATGCCATTTGTGTGGGAGGAGTATCAACTTaGGGAATATCAAACTCCTTG +
Preference number: 4 (lower is better)
Translates to: IQQLEETEYGRLWNAICVGGVST*GISNSL
Trigger: CAAGGAGTTTGATATTCCTCAAGTTGATACTCCTCC...CACACAAATGGCATTCCAGAGTCTGCCATACTCCGTCTCCTCCAGCTGCTGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp GGGAATGGTGCTGTGGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTCGCATAACTGATCCATaGAGTGAAAAAGAATCAGGT +
Preference number: 4 (lower is better)
Translates to: GNGAVDALGTEAQFGTSSRITDP*SEKESG
Trigger: ACCTGATTCTTTTTCACTTCATGGATCAGTTATGCG...AGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACCATTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp TGGGAATGGTGCTGTGGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCCGCATAACTGATCCATaGAGTGAAAAAGAATCAGGT +
Preference number: 4 (lower is better)
Translates to: WEWCCGRSGHRSPIWNLFRITDP*SEKESG
Trigger: ACCTGATTCTTTTTCACTTCATGGATCAGTTATGCG...GAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACCATTCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp ATCCAGCAGCTGGAGGAGACGGAGTATGGCAGACTCTGGAATGCCATTTGTGTGATTAAAGCCAATCCATaGGATGTACCCACTGCTATC +
Preference number: 4 (lower is better)
Translates to: IQQLEETEYGRLWNAICVIKANP*DVPTAI
Trigger: GATAGCAGTGGGTACATCTCATGGATTGGCTTTAAT...CACACAAATGGCATTCCAGAGTCTGCCATACTCCGTCTCCTCCAGCTGCTGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp CAGTGTCTGCTCTCTCCAAGGCATGCTTCAGTTATACTGCAGCCTGGCCAACCAATTAAAGCCAATCCATaGGATGTACCCACTGCTATC +
Preference number: 4 (lower is better)
Translates to: QCLLSPRHASVILQPGQPIKANP*DVPTAI
Trigger: GATAGCAGTGGGTACATCTCATGGATTGGCTTTAAT...TGGTTGGCCAGGCTGCAGTATAACTGAAGCATGCCTTGGAGAGAGCAGACACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp ACAGCAATGTGGAGAAGACTGGGAGTCTACACTGGGAATGGTGCTGTGGACGCTAACTGTGTGATGGGATaGTCTTTCAACTCAGGCTTA +
Preference number: 4 (lower is better)
Translates to: TAMWRRLGVYTGNGAVDANCVMG*SFNSGL
Trigger: TAAGCCTGAGTTGAAAGATCATCCCATCACACAGTT...AGCGTCCACAGCACCATTCCCAGTGTAGACTCCCAGTCTTCTCCACATTGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp AATGGTGCTGTGGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTCAGGAGCACAACTGTGCGTaGATTTATCCAGGTAAAGTT +
Preference number: 4 (lower is better)
Translates to: NGAVDALGTEAQFGTSSQEHNCA*IYPGKV
Trigger: AACTTTACCTGGATAAATTCACGCACAGTTGTGCTC...CTGAGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp GGTTTTAACATGAACACATTAAAGGGAGATGGCCCTGGCCCCCACAGTGTCTGCGGCAGTAATCAACTATaGCAGGCACCATATCCTGAA +
Preference number: 4 (lower is better)
Translates to: GFNMNTLKGDGPGPHSVCGSNQL*QAPYPE
Trigger: TTCAGGATATGGTGCCTGTCATAGTTGATTACTGCC...GCAGACACTGTGGGGGCCAGGGCCATCTCCCTTTAATGTGTTCATGTTAAAACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000625842.3
CDS-3UTR TCA 90 bp ATAGGTTTTAACATGAACACATTAAAGGGAGATGGCCCTGGCCCCCACAGTGTCCGACTCTCTTCAAATTaGACTATGCCTCCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: IGFNMNTLKGDGPGPHSVRLSSN*TMPPAC
Trigger: GCAGGCTGGAGGCATAGTTCAATTTGAAGAGAGTCG...GACACTGTGGGGGCCAGGGCCATCTCCCTTTAATGTGTTCATGTTAAAACCTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp CAATGTGGAGAAGACTGGGAGTCTACACTGGGAATGGTGCTGTGGACGCTCTGGCCAATAGATAAGCGGTaGCTTCATGAAGTTGATACT +
Preference number: 4 (lower is better)
Translates to: QCGEDWESTLGMVLWTLWPIDKR*LHEVDT
Trigger: AGTATCAACTTCATGAAGTCACCGCTTATCTATTGG...CCAGAGCGTCCACAGCACCATTCCCAGTGTAGACTCCCAGTCTTCTCCACATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp TGGGAATGGTGCTGTGGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCATTAGGAAGGCACCATaGATATCTCCTTTCTTTTCC +
Preference number: 4 (lower is better)
Translates to: WEWCCGRSGHRSPIWNLFIRKAP*ISPFFS
Trigger: GGAAAAGAAAGGAGATATTCATGGTGCCTTCCTAAT...GAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACCATTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp CAATGTGGAGAAGACTGGGAGTCTACACTGGGAATGGTGCTGTGGACGCTCTGGTTCAACATCCTTCAATaGGGGATCCTCTTTGGTATT +
Preference number: 4 (lower is better)
Translates to: QCGEDWESTLGMVLWTLWFNILQ*GILFGI
Trigger: AATACCAAAGAGGATCCCTCATTGAAGGATGTTGAA...CCAGAGCGTCCACAGCACCATTCCCAGTGTAGACTCCCAGTCTTCTCCACATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp CTGCAGCCTGGCCAACCACTGTTCCCTGTAGAAGTTGAAGTTCCTCTGTATTATGCTTCAGAGTGTAGATaGGGAATGGCTGAACTGGAC +
Preference number: 4 (lower is better)
Translates to: LQPGQPLFPVEVEVPLYYASECR*GMAELD
Trigger: GTCCAGTTCAGCCATTCCTCATCTACACTCTGAAGC...ATAATACAGAGGAACTTCAACTTCTACAGGGAACAGTGGTTGGCCAGGCTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp CCAGCAGCTGGAGGAGACGGAGTATGGCAGACTCTGGAATGCCATTTGTGTGAGGATTCTTTGCAAGATTaGTGGAAGGGCAATAAATGC +
Preference number: 4 (lower is better)
Translates to: PAAGGDGVWQTLECHLCEDSLQD*WKGNKC
Trigger: GCATTTATTGCCCTTCCATCAATCTTGCAAAGAATC...CTCACACAAATGGCATTCCAGAGTCTGCCATACTCCGTCTCCTCCAGCTGCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp CAGTGTCTGCTCTCTCCAAGGCATGCTTCAGTTATACTGCAGCCTGGCCAACCATCTCAGGTTACACAATaGCCAATGGAGATCTTGGTT +
Preference number: 4 (lower is better)
Translates to: QCLLSPRHASVILQPGQPSQVTQ*PMEILV
Trigger: AACCAAGATCTCCATTGGTCATTGTGTAACCTGAGA...TGGTTGGCCAGGCTGCAGTATAACTGAAGCATGCCTTGGAGAGAGCAGACACTG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp CAGTGTCTGCTCTCTCCAAGGCATGCTTCAGTTATACTGCAGCCTGGCCAACCAAGACATTTTTACCTGTaGTGGGGTTATCCTTCCCTT +
Preference number: 4 (lower is better)
Translates to: QCLLSPRHASVILQPGQPRHFYL*WGYPSL
Trigger: AAGGGAAGGATAACCCCATCACAGGTAAAAATGTCT...TGGTTGGCCAGGCTGCAGTATAACTGAAGCATGCCTTGGAGAGAGCAGACACTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp ACAGCAATGTGGAGAAGACTGGGAGTCTACACTGGGAATGGTGCTGTGGACGCTGTTCCCTGTAGAAGTTaGAGTTCCTCTGTATTATCC +
Preference number: 4 (lower is better)
Translates to: TAMWRRLGVYTGNGAVDAVPCRS*SSSVLS
Trigger: GGATAATACAGAGGAACTTCAACTTCTACAGGGAAC...AGCGTCCACAGCACCATTCCCAGTGTAGACTCCCAGTCTTCTCCACATTGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp TATTATCCAGCAGCTGGAGGAGACGGAGTATGGCAGACTCTGGAATGCCATTTGACTGGATACTGCAATTaGTGTAGGCAAGCCAGCATC +
Preference number: 4 (lower is better)
Translates to: YYPAAGGDGVWQTLECHLTGYCN*CRQASI
Trigger: GATGCTGGCTTGCCTACAGCAATTGCAGTATCCAGT...CAAATGGCATTCCAGAGTCTGCCATACTCCGTCTCCTCCAGCTGCTGGATAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp GGAGAAGACTGGGAGTCTACACTGGGAATGGTGCTGTGGACGCTCTGGGCACAGTCTGTAAACTTGATATaGAATATTGCTGTTCCTGGA +
Preference number: 4 (lower is better)
Translates to: GEDWESTLGMVLWTLWAQSVNLI*NIAVPG
Trigger: TCCAGGAACAGCAATATTGCATATCAAGTTTACAGA...CTGTGCCCAGAGCGTCCACAGCACCATTCCCAGTGTAGACTCCCAGTCTTCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp CAATGTGGAGAAGACTGGGAGTCTACACTGGGAATGGTGCTGTGGACGCTCTGGTCCCACTACTGCTTTTaGTTTTCCTTCATGGAAAGA +
Preference number: 4 (lower is better)
Translates to: QCGEDWESTLGMVLWTLWSHYCF*FSFMER
Trigger: TCTTTCCATGAAGGAAAAGCAAAAGCAGTAGTGGGA...CCAGAGCGTCCACAGCACCATTCCCAGTGTAGACTCCCAGTCTTCTCCACATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp CCTGGCCAACCACTGTTCCCTGTAGAAGTTGAAGTTCCTCTGTATTATCCAGCATCAGGCTTTGCAAGCTaGCGAGCAAGGAAGGTAAAG +
Preference number: 4 (lower is better)
Translates to: PGQPLFPVEVEVPLYYPASGFAS*RARKVK
Trigger: CTTTACCTTCCTTGCTCGGCAGCTTGCAAAGCCTGA...TGCTGGATAATACAGAGGAACTTCAACTTCTACAGGGAACAGTGGTTGGCCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp TCTTTCAGAGTGTCGGGAGTCATCGTCAGGACTACAAAGGAATTCAAGGACCTGTCAGGCTTTGCAAGCTaGCGAGCAAGGAAGGTAAAG +
Preference number: 4 (lower is better)
Translates to: SFRVSGVIVRTTKEFKDLSGFAS*RARKVK
Trigger: CTTTACCTTCCTTGCTCGGCAGCTTGCAAAGCCTGA...CAGGTCCTTGAATTCCTTTGTAGTCCTGACGATGACTCCCGACACTCTGAAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452140.5
CDS-3UTR GCA 90 bp CAACCACTGTTCCCTGTAGAAGTTGAAGTTCCTCTGTATTATCCAGCAGCTGGAGGTGTTGTCAGGCTTTaGAAGCTGCCGAGCAAGGAA +
Preference number: 4 (lower is better)
Translates to: QPLFPVEVEVPLYYPAAGGVVRL*KLPSKE
Trigger: TTCCTTGCTCGGCAGCTTGCAAAGCCTGACAACACC...TCCAGCTGCTGGATAATACAGAGGAACTTCAACTTCTACAGGGAACAGTGGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp TTTCAGAGTGTCGGGAGTCATCGTCAGGACTACAAAGGAATTCAAGGACCTGATGGTGTTGTCAGGCTTTaGAAGCTGCCGAGCAAGGAA +
Preference number: 4 (lower is better)
Translates to: FQSVGSHRQDYKGIQGPDGVVRL*KLPSKE
Trigger: TTCCTTGCTCGGCAGCTTGCAAAGCCTGACAACACC...ATCAGGTCCTTGAATTCCTTTGTAGTCCTGACGATGACTCCCGACACTCTGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452140.5
CDS-3UTR GCA 90 bp TGTATTATCCAGCAGCTGGAGGAGACGGAGTATGGCAGACTCTGGAATGCCATTGAACTCAGCTTTTTCTaGCATCCGGATGAGTCGACT +
Preference number: 4 (lower is better)
Translates to: CIIQQLEETEYGRLWNAIELSFF*HPDEST
Trigger: AGTCGACTCATCCGGATGGCAGAAAAAGCTGAGTTC...AATGGCATTCCAGAGTCTGCCATACTCCGTCTCCTCCAGCTGCTGGATAATACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp CTCTCTCCAAGGCATGCTTCAGTTATACTGCAGCCTGGCCAACCACTGTTCCCTAGTGCCTCACGTTGCTaGTGGTTCAAATTATGTGAA +
Preference number: 4 (lower is better)
Translates to: LSPRHASVILQPGQPLFPSASRC*WFKLCE
Trigger: TTCACATAATTTGAACCAGCAGCAACGTGAGGCACT...AGGGAACAGTGGTTGGCCAGGCTGCAGTATAACTGAAGCATGCCTTGGAGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp AATGGTGCTGTGGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTCAGAGTGCCTCACGTTGCTaGTGGTTCAAATTATGTGAA +
Preference number: 4 (lower is better)
Translates to: NGAVDALGTEAQFGTSSQSASRC*WFKLCE
Trigger: TTCACATAATTTGAACCAGCAGCAACGTGAGGCACT...CTGAGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp CAGTGTCTGCTCTCTCCAAGGCATGCTTCAGTTATACTGCAGCCTGGCCAACCACAAAGTGCCTCACGTTaGTGCTGGTTCAAATTATGT +
Preference number: 4 (lower is better)
Translates to: QCLLSPRHASVILQPGQPQSASR*CWFKLC
Trigger: ACATAATTTGAACCAGCAGCAACGTGAGGCACTTTG...TGGTTGGCCAGGCTGCAGTATAACTGAAGCATGCCTTGGAGAGAGCAGACACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp CAACCACTGTTCCCTGTAGAAGTTGAAGTTCCTCTGTATTATCCAGCAGCTGGATATAGCTCTCGCTGCTaGGATTCTGGGAGAGTTCCG +
Preference number: 4 (lower is better)
Translates to: QPLFPVEVEVPLYYPAAGYSSRC*DSGRVP
Trigger: CGGAACTCTCCCAGAATCGCAGCAGCGAGAGCTATA...TCCAGCTGCTGGATAATACAGAGGAACTTCAACTTCTACAGGGAACAGTGGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp CAGTGTCTGCTCTCTCCAAGGCATGCTTCAGTTATACTGCAGCCTGGCCAACCATATGCTTTCCAGTGTTaGAGGAGTATCAACTTGAGG +
Preference number: 4 (lower is better)
Translates to: QCLLSPRHASVILQPGQPYAFQC*RSINLR
Trigger: CCTCAAGTTGATACTCCTCCAACACTGGAAAGCATA...TGGTTGGCCAGGCTGCAGTATAACTGAAGCATGCCTTGGAGAGAGCAGACACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp TCCAAGGCATGCTTCAGTTATACTGCAGCCTGGCCAACCACTGTTCCCTGTAGAGCTGCAGACACTATCTaGGCAGAAATTCCCTTCAAA +
Preference number: 4 (lower is better)
Translates to: SKACFSYTAAWPTTVPCRAADTI*AEIPFK
Trigger: TTTGAAGGGAATTTCTGCCCAGATAGTGTCTGCAGC...TCTACAGGGAACAGTGGTTGGCCAGGCTGCAGTATAACTGAAGCATGCCTTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp ACAGCAATGTGGAGAAGACTGGGAGTCTACACTGGGAATGGTGCTGTGGACGCTCCCAAGATAAGTCCCTaGATTTCTCCAAGTTTTCCT +
Preference number: 4 (lower is better)
Translates to: TAMWRRLGVYTGNGAVDAPKISP*ISPSFP
Trigger: AGGAAAACTTGGAGAAATCCAGGGACTTATCTTGGG...AGCGTCCACAGCACCATTCCCAGTGTAGACTCCCAGTCTTCTCCACATTGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp CAGTGTCTGCTCTCTCCAAGGCATGCTTCAGTTATACTGCAGCCTGGCCAACCACCCAAGATAAGTCCCTaGATTTCTCCAAGTTTTCCT +
Preference number: 4 (lower is better)
Translates to: QCLLSPRHASVILQPGQPPKISP*ISPSFP
Trigger: AGGAAAACTTGGAGAAATCCAGGGACTTATCTTGGG...TGGTTGGCCAGGCTGCAGTATAACTGAAGCATGCCTTGGAGAGAGCAGACACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp GGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTCAGAAGCGTGGGAGTTACACAATGACCAATaGAGATCTTGGTTTAGAAGG +
Preference number: 4 (lower is better)
Translates to: GRSGHRSPIWNLFSEAWELHNDQ*RSWFRR
Trigger: CCTTCTAAACCAAGATCTCCATTGGTCATTGTGTAA...CTCCCACGCTTCTGAGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp TCCAAGGCATGCTTCAGTTATACTGCAGCCTGGCCAACCACTGTTCCCTGTAGACATGTCCATCTTGTTTaGCCCTCAAATTCCACAGTG +
Preference number: 4 (lower is better)
Translates to: SKACFSYTAAWPTTVPCRHVHLV*PSNSTV
Trigger: CACTGTGGAATTTGAGGGCCAAACAAGATGGACATG...TCTACAGGGAACAGTGGTTGGCCAGGCTGCAGTATAACTGAAGCATGCCTTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp CCCAATTTGGAACCTCTTCTCAGAAGCGTGGGAGGTGGTGGAGGCCAAGCCCACTATTTCCTAAAAAGCTaGACAGAGGTATGTGACATT +
Preference number: 4 (lower is better)
Translates to: PNLEPLLRSVGGGGGQAHYFLKS*TEVCDI
Trigger: AATGTCACATACCTCTGTCCAGCTTTTTAGGAAATA...GTGGGCTTGGCCTCCACCACCTCCCACGCTTCTGAGAAGAGGTTCCAAATTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp GTGGAGAAGACTGGGAGTCTACACTGGGAATGGTGCTGTGGACGCTCTGGGCACTATTTCCTAAAAAGCTaGACAGAGGTATGTGACATT +
Preference number: 4 (lower is better)
Translates to: VEKTGSLHWEWCCGRSGHYFLKS*TEVCDI
Trigger: AATGTCACATACCTCTGTCCAGCTTTTTAGGAAATA...GTGCCCAGAGCGTCCACAGCACCATTCCCAGTGTAGACTCCCAGTCTTCTCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp AATGGTGCTGTGGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTCAGCGCATAACTGATCCATaGAGTGAAAAAGAATCAGGT +
Preference number: 4 (lower is better)
Translates to: NGAVDALGTEAQFGTSSQRITDP*SEKESG
Trigger: ACCTGATTCTTTTTCACTTCATGGATCAGTTATGCG...CTGAGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp CAACCACTGTTCCCTGTAGAAGTTGAAGTTCCTCTGTATTATCCAGCAGCTGGAGAGATAGCGCCATACTaGCCTCCAACACTAGTGCTA +
Preference number: 4 (lower is better)
Translates to: QPLFPVEVEVPLYYPAAGEIAPY*PPTLVL
Trigger: TAGCACTAGTGTTGGAGGTCAGTATGGCGCTATCTC...TCCAGCTGCTGGATAATACAGAGGAACTTCAACTTCTACAGGGAACAGTGGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp AATGGTGCTGTGGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTCAGGCCACAAAGAAGTCTTaGGCAATCATTGTTGATACT +
Preference number: 4 (lower is better)
Translates to: NGAVDALGTEAQFGTSSQATKKS*AIIVDT
Trigger: AGTATCAACAATGATTGCTCAAGACTTCTTTGTGGC...CTGAGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp CTCTCTCCAAGGCATGCTTCAGTTATACTGCAGCCTGGCCAACCACTGTTCCCTGCCACAAAGAAGTCTTaGGCAATCATTGTTGATACT +
Preference number: 4 (lower is better)
Translates to: LSPRHASVILQPGQPLFPATKKS*AIIVDT
Trigger: AGTATCAACAATGATTGCTCAAGACTTCTTTGTGGC...AGGGAACAGTGGTTGGCCAGGCTGCAGTATAACTGAAGCATGCCTTGGAGAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp GGTGCTGTGGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTCAGAAGTTTACCAATAGAAAATaGACAACATCTCCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: GAVDALGTEAQFGTSSQKFTNRK*TTSPLQ
Trigger: CTGCAGAGGAGATGTTGTTCATTTTCTATTGGTAAA...CTTCTGAGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp GGGAATGGTGCTGTGGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTTTTACCAATAGAAAATaGACAACATCTCCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: GNGAVDALGTEAQFGTSSFTNRK*TTSPLQ
Trigger: CTGCAGAGGAGATGTTGTTCATTTTCTATTGGTAAA...AGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACCATTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp CTCTCTCCAAGGCATGCTTCAGTTATACTGCAGCCTGGCCAACCACTGTTCCCTTATCCATATGTACAATaGGCGCTTCCACATTTTCCA +
Preference number: 4 (lower is better)
Translates to: LSPRHASVILQPGQPLFPYPYVQ*ALPHFP
Trigger: TGGAAAATGTGGAAGCGCTCATTGTACATATGGATA...AGGGAACAGTGGTTGGCCAGGCTGCAGTATAACTGAAGCATGCCTTGGAGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000625842.3
CDS-3UTR TCA 90 bp ACAGCAATGTGGAGAAGACTGGGAGTCTACACTGGGAATGGTGCTGTGGACGCTTATCCATATGTACAATaGGCGCTTCCACATTTTCCA +
Preference number: 4 (lower is better)
Translates to: TAMWRRLGVYTGNGAVDAYPYVQ*ALPHFP
Trigger: TGGAAAATGTGGAAGCGCTCATTGTACATATGGATA...AGCGTCCACAGCACCATTCCCAGTGTAGACTCCCAGTCTTCTCCACATTGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000625842.3
CDS-3UTR TCA 90 bp TCCAAGGCATGCTTCAGTTATACTGCAGCCTGGCCAACCACTGTTCCCTGTAGAACGAGTTCCTCAATATaGTCCATTGCTTTCTGCCAT +
Preference number: 4 (lower is better)
Translates to: SKACFSYTAAWPTTVPCRTSSSI*SIAFCH
Trigger: ATGGCAGAAAGCAATGGATCATATTGAGGAACTCGT...TCTACAGGGAACAGTGGTTGGCCAGGCTGCAGTATAACTGAAGCATGCCTTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp CTCTCTCCAAGGCATGCTTCAGTTATACTGCAGCCTGGCCAACCACTGTTCCCTCCAATAGATAAGCGGTaGCTTCATGAAGTTGATACT +
Preference number: 4 (lower is better)
Translates to: LSPRHASVILQPGQPLFPPIDKR*LHEVDT
Trigger: AGTATCAACTTCATGAAGTCACCGCTTATCTATTGG...AGGGAACAGTGGTTGGCCAGGCTGCAGTATAACTGAAGCATGCCTTGGAGAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp CAGTGTCTGCTCTCTCCAAGGCATGCTTCAGTTATACTGCAGCCTGGCCAACCATTCAACATCCTTCAATaGGGGATCCTCTTTGGTATT +
Preference number: 4 (lower is better)
Translates to: QCLLSPRHASVILQPGQPFNILQ*GILFGI
Trigger: AATACCAAAGAGGATCCCTCATTGAAGGATGTTGAA...TGGTTGGCCAGGCTGCAGTATAACTGAAGCATGCCTTGGAGAGAGCAGACACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp ACAGCAATGTGGAGAAGACTGGGAGTCTACACTGGGAATGGTGCTGTGGACGCTGATTCTTTGCAAGATTaGTGGAAGGGCAATAAATGC +
Preference number: 4 (lower is better)
Translates to: TAMWRRLGVYTGNGAVDADSLQD*WKGNKC
Trigger: GCATTTATTGCCCTTCCATCAATCTTGCAAAGAATC...AGCGTCCACAGCACCATTCCCAGTGTAGACTCCCAGTCTTCTCCACATTGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp TCCAAGGCATGCTTCAGTTATACTGCAGCCTGGCCAACCACTGTTCCCTGTAGATCTCAGGTTACACAATaGCCAATGGAGATCTTGGTT +
Preference number: 4 (lower is better)
Translates to: SKACFSYTAAWPTTVPCRSQVTQ*PMEILV
Trigger: AACCAAGATCTCCATTGGTCATTGTGTAACCTGAGA...TCTACAGGGAACAGTGGTTGGCCAGGCTGCAGTATAACTGAAGCATGCCTTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp TGTATTATCCAGCAGCTGGAGGAGACGGAGTATGGCAGACTCTGGAATGCCATTCACATGAGAACTACCTaGAAATGCTGCTCCATCACT +
Preference number: 4 (lower is better)
Translates to: CIIQQLEETEYGRLWNAIHMRTT*KCCSIT
Trigger: AGTGATGGAGCAGCATTTTCAGGTAGTTCTCATGTG...AATGGCATTCCAGAGTCTGCCATACTCCGTCTCCTCCAGCTGCTGGATAATACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446204.6
CDS-3UTR GCA 90 bp CCTGGCCAACCACTGTTCCCTGTAGAAGTTGAAGTTCCTCTGTATTATCCAGCAACTGGATACTGCAATTaGTGTAGGCAAGCCAGCATC +
Preference number: 4 (lower is better)
Translates to: PGQPLFPVEVEVPLYYPATGYCN*CRQASI
Trigger: GATGCTGGCTTGCCTACAGCAATTGCAGTATCCAGT...TGCTGGATAATACAGAGGAACTTCAACTTCTACAGGGAACAGTGGTTGGCCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp TATTATCCAGCAGCTGGAGGAGACGGAGTATGGCAGACTCTGGAATGCCATTTGTATCAGACTGGATACTaGAATTGCTGTAGGCAAGCC +
Preference number: 4 (lower is better)
Translates to: YYPAAGGDGVWQTLECHLYQTGY*NCCRQA
Trigger: GGCTTGCCTACAGCAATTGCAGTATCCAGTCTGATA...CAAATGGCATTCCAGAGTCTGCCATACTCCGTCTCCTCCAGCTGCTGGATAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp GCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTCAGAAGCGTGGGAGGTGGCTTAGTAACATGTATTaGTCCAGATTCATCTCTCTT +
Preference number: 4 (lower is better)
Translates to: ALGTEAQFGTSSQKRGRWLSNMY*SRFISL
Trigger: AAGAGAGATGAATCTGGAGCAATACATGTTACTAAG...CCACCTCCCACGCTTCTGAGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp CAGTGTCTGCTCTCTCCAAGGCATGCTTCAGTTATACTGCAGCCTGGCCAACCAAATTCCTCTTGTGTTTaGCGATCAATCACATGCAAC +
Preference number: 4 (lower is better)
Translates to: QCLLSPRHASVILQPGQPNSSCV*RSITCN
Trigger: GTTGCATGTGATTGATCGGCAAACACAAGAGGAATT...TGGTTGGCCAGGCTGCAGTATAACTGAAGCATGCCTTGGAGAGAGCAGACACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp ACAGCAATGTGGAGAAGACTGGGAGTCTACACTGGGAATGGTGCTGTGGACGCTTCCCACTACTGCTTTTaGTTTTCCTTCATGGAAAGA +
Preference number: 4 (lower is better)
Translates to: TAMWRRLGVYTGNGAVDASHYCF*FSFMER
Trigger: TCTTTCCATGAAGGAAAAGCAAAAGCAGTAGTGGGA...AGCGTCCACAGCACCATTCCCAGTGTAGACTCCCAGTCTTCTCCACATTGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp GGTTTTAACATGAACACATTAAAGGGAGATGGCCCTGGCCCCCACAGTGTCTGCAATTCTAAAAGGACCTaGTGTCTTTCAGAGTGTCGG +
Preference number: 4 (lower is better)
Translates to: GFNMNTLKGDGPGPHSVCNSKRT*CLSECR
Trigger: CCGACACTCTGAAAGACAGCAGGTCCTTTTAGAATT...GCAGACACTGTGGGGGCCAGGGCCATCTCCCTTTAATGTGTTCATGTTAAAACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp CCTGGCCAACCACTGTTCCCTGTAGAAGTTGAAGTTCCTCTGTATTATCCAGCAGAACTCAGCTTTTTCTaGCATCCGGATGAGTCGACT +
Preference number: 4 (lower is better)
Translates to: PGQPLFPVEVEVPLYYPAELSFF*HPDEST
Trigger: AGTCGACTCATCCGGATGGCAGAAAAAGCTGAGTTC...TGCTGGATAATACAGAGGAACTTCAACTTCTACAGGGAACAGTGGTTGGCCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp ACAGCAATGTGGAGAAGACTGGGAGTCTACACTGGGAATGGTGCTGTGGACGCTCTCAATATGATCCATTaGTTTCTGCCATACAGACTG +
Preference number: 4 (lower is better)
Translates to: TAMWRRLGVYTGNGAVDALNMIH*FLPYRL
Trigger: CAGTCTGTATGGCAGAAAGCAATGGATCATATTGAG...AGCGTCCACAGCACCATTCCCAGTGTAGACTCCCAGTCTTCTCCACATTGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp TCCAAGGCATGCTTCAGTTATACTGCAGCCTGGCCAACCACTGTTCCCTGTAGAAGTGCCTCACGTTGCTaGTGGTTCAAATTATGTGAA +
Preference number: 4 (lower is better)
Translates to: SKACFSYTAAWPTTVPCRSASRC*WFKLCE
Trigger: TTCACATAATTTGAACCAGCAGCAACGTGAGGCACT...TCTACAGGGAACAGTGGTTGGCCAGGCTGCAGTATAACTGAAGCATGCCTTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp TGTATTATCCAGCAGCTGGAGGAGACGGAGTATGGCAGACTCTGGAATGCCATTTGGCGTCTCTTGTACTaGTGCAAACATATAGAGCAG +
Preference number: 4 (lower is better)
Translates to: CIIQQLEETEYGRLWNAIWRLLY*CKHIEQ
Trigger: CTGCTCTATATGTTTGCAGCAGTACAAGAGACGCCA...AATGGCATTCCAGAGTCTGCCATACTCCGTCTCCTCCAGCTGCTGGATAATACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp ACTTATGCTACCCAACCTAGAGCTTCCTACGAGGCATGGGGAAGAGATGAGAACGAGAGAGTACCAGCGTaGTTTCAATATCCCCTAGTT +
Preference number: 4 (lower is better)
Translates to: TYATQPRASYEAWGRDENERVPA*FQYPLV
Trigger: AACTAGGGGATATTGAAAGCACGCTGGTACTCTCTC...GTTCTCATCTCTTCCCCATGCCTCGTAGGAAGCTCTAGGTTGGGTAGCATAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424463.4
CDS-3UTR CCA 90 bp TCCAAGGCATGCTTCAGTTATACTGCAGCCTGGCCAACCACTGTTCCCTGTAGATATGCTTTCCAGTGTTaGAGGAGTATCAACTTGAGG +
Preference number: 4 (lower is better)
Translates to: SKACFSYTAAWPTTVPCRYAFQC*RSINLR
Trigger: CCTCAAGTTGATACTCCTCCAACACTGGAAAGCATA...TCTACAGGGAACAGTGGTTGGCCAGGCTGCAGTATAACTGAAGCATGCCTTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp ACAGCAATGTGGAGAAGACTGGGAGTCTACACTGGGAATGGTGCTGTGGACGCTTCTTCCTTTTTAAGTTaGTCCTGTCACCACTATCTG +
Preference number: 4 (lower is better)
Translates to: TAMWRRLGVYTGNGAVDASSFLS*SCHHYL
Trigger: CAGATAGTGGTGACAGGACCAACTTAAAAAGGAAGA...AGCGTCCACAGCACCATTCCCAGTGTAGACTCCCAGTCTTCTCCACATTGCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp CTCTCTCCAAGGCATGCTTCAGTTATACTGCAGCCTGGCCAACCACTGTTCCCTCAATATTGCTGTTCCTaGAGGATGAGCATCTGTTAT +
Preference number: 4 (lower is better)
Translates to: LSPRHASVILQPGQPLFPQYCCS*RMSICY
Trigger: ATAACAGATGCTCATCCTCCAGGAACAGCAATATTG...AGGGAACAGTGGTTGGCCAGGCTGCAGTATAACTGAAGCATGCCTTGGAGAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp AATGGTGCTGTGGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTCAGTGCAGAAGGCAAGCATaGGATTCACGTAATTTTGTA +
Preference number: 4 (lower is better)
Translates to: NGAVDALGTEAQFGTSSQCRRQA*DSRNFV
Trigger: TACAAAATTACGTGAATCCCATGCTTGCCTTCTGCA...CTGAGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp TGTATTATCCAGCAGCTGGAGGAGACGGAGTATGGCAGACTCTGGAATGCCATTTTTGCTTTTCCTTCATaGAAAGACCACGCAAGAGCC +
Preference number: 4 (lower is better)
Translates to: CIIQQLEETEYGRLWNAIFAFPS*KDHARA
Trigger: GGCTCTTGCGTGGTCTTTCCATGAAGGAAAAGCAAA...AATGGCATTCCAGAGTCTGCCATACTCCGTCTCCTCCAGCTGCTGGATAATACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp CCTGGCCAACCACTGTTCCCTGTAGAAGTTGAAGTTCCTCTGTATTATCCAGCATCATCAGCCATTTCTTaGCGTCTCTTGTACTGCTGC +
Preference number: 4 (lower is better)
Translates to: PGQPLFPVEVEVPLYYPASSAIS*RLLYCC
Trigger: GCAGCAGTACAAGAGACGCCAAGAAATGGCTGATGA...TGCTGGATAATACAGAGGAACTTCAACTTCTACAGGGAACAGTGGTTGGCCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp CAACCACTGTTCCCTGTAGAAGTTGAAGTTCCTCTGTATTATCCAGCAGCTGGACAGTGGGATCCCCTTTaGACTGATGATACGATGGAG +
Preference number: 4 (lower is better)
Translates to: QPLFPVEVEVPLYYPAAGQWDPL*TDDTME
Trigger: CTCCATCGTATCATCAGTCCAAAGGGGATCCCACTG...TCCAGCTGCTGGATAATACAGAGGAACTTCAACTTCTACAGGGAACAGTGGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp CCTGGCCAACCACTGTTCCCTGTAGAAGTTGAAGTTCCTCTGTATTATCCAGCAGGAATGAGCTGCAGCTaGAAGTTCTCATTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: PGQPLFPVEVEVPLYYPAGMSCS*KFSFWK
Trigger: CTTCCAGAATGAGAACTTCCAGCTGCAGCTCATTCC...TGCTGGATAATACAGAGGAACTTCAACTTCTACAGGGAACAGTGGTTGGCCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp GCTGGACAGAGGTATGTGACATTCCTTTGCTTAACAAGCAAAACAAAATCAATGCCTCGGGATCATCTCTaGTTCTCCTGGGCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: AGQRYVTFLCLTSKTKSMPRDHL*FSWARL
Trigger: GAGCCTGGCCCAGGAGAACCAGAGATGATCCCGAGG...CATTGATTTTGTTTTGCTTGTTAAGCAAAGGAATGTCACATACCTCTGTCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp ACTTATGCTACCCAACCTAGAGCTTCCTACGAGGCATGGGGAAGAGATGAGAACGGAGGAGTATCAACTTaGGGAATATCAAACTCCTTG +
Preference number: 4 (lower is better)
Translates to: TYATQPRASYEAWGRDENGGVST*GISNSL
Trigger: CAAGGAGTTTGATATTCCTCAAGTTGATACTCCTCC...GTTCTCATCTCTTCCCCATGCCTCGTAGGAAGCTCTAGGTTGGGTAGCATAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424463.4
CDS-3UTR TCA 90 bp GGTTTTAACATGAACACATTAAAGGGAGATGGCCCTGGCCCCCACAGTGTCTGCGCCACAAAGAAGTCTTaGGCAATCATTGTTGATACT +
Preference number: 4 (lower is better)
Translates to: GFNMNTLKGDGPGPHSVCATKKS*AIIVDT
Trigger: AGTATCAACAATGATTGCTCAAGACTTCTTTGTGGC...GCAGACACTGTGGGGGCCAGGGCCATCTCCCTTTAATGTGTTCATGTTAAAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp TATTATCCAGCAGCTGGAGGAGACGGAGTATGGCAGACTCTGGAATGCCATTTGCAGTGGCTAGTGATTTaGAATGGCTGCTATTGTAGA +
Preference number: 4 (lower is better)
Translates to: YYPAAGGDGVWQTLECHLQWLVI*NGCYCR
Trigger: TCTACAATAGCAGCCATTTCAAATCACTAGCCACTG...CAAATGGCATTCCAGAGTCTGCCATACTCCGTCTCCTCCAGCTGCTGGATAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp CCTGGCCAACCACTGTTCCCTGTAGAAGTTGAAGTTCCTCTGTATTATCCAGCAGACCACCATAGCTACTaGTGGATTGATAACAAGCCT +
Preference number: 4 (lower is better)
Translates to: PGQPLFPVEVEVPLYYPADHHSY*WIDNKP
Trigger: AGGCTTGTTATCAATCCATCAGTAGCTATGGTGGTC...TGCTGGATAATACAGAGGAACTTCAACTTCTACAGGGAACAGTGGTTGGCCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp CTGCAGCCTGGCCAACCACTGTTCCCTGTAGAAGTTGAAGTTCCTCTGTATTATTTTCTGCCATCCGGATaGGTCGACTCTCTTCAAATT +
Preference number: 4 (lower is better)
Translates to: LQPGQPLFPVEVEVPLYYFLPSG*VDSLQI
Trigger: AATTTGAAGAGAGTCGACTCATCCGGATGGCAGAAA...ATAATACAGAGGAACTTCAACTTCTACAGGGAACAGTGGTTGGCCAGGCTGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp CAACCACTGTTCCCTGTAGAAGTTGAAGTTCCTCTGTATTATCCAGCAGCTGGATGGGTTGGGTTGAACTaGCACAACAGCTCAATGAAC +
Preference number: 4 (lower is better)
Translates to: QPLFPVEVEVPLYYPAAGWVGLN*HNSSMN
Trigger: GTTCATTGAGCTGTTGTGTCAGTTCAACCCAACCCA...TCCAGCTGCTGGATAATACAGAGGAACTTCAACTTCTACAGGGAACAGTGGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp TCCAAGGCATGCTTCAGTTATACTGCAGCCTGGCCAACCACTGTTCCCTGTAGATTCAACATCCTTCAATaGGGGATCCTCTTTGGTATT +
Preference number: 4 (lower is better)
Translates to: SKACFSYTAAWPTTVPCRFNILQ*GILFGI
Trigger: AATACCAAAGAGGATCCCTCATTGAAGGATGTTGAA...TCTACAGGGAACAGTGGTTGGCCAGGCTGCAGTATAACTGAAGCATGCCTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp CCTGGCCAACCACTGTTCCCTGTAGAAGTTGAAGTTCCTCTGTATTATCCAGCAATCCAGAACAGGTTCTaGGGTTCCCTTTTTAGCAGT +
Preference number: 4 (lower is better)
Translates to: PGQPLFPVEVEVPLYYPAIQNRF*GSLFSS
Trigger: ACTGCTAAAAAGGGAACCTCAGAACCTGTTCTGGAT...TGCTGGATAATACAGAGGAACTTCAACTTCTACAGGGAACAGTGGTTGGCCAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp TATTATCCAGCAGCTGGAGGAGACGGAGTATGGCAGACTCTGGAATGCCATTTGGTTCCCTGTAGAAGTTaGAGTTCCTCTGTATTATCC +
Preference number: 4 (lower is better)
Translates to: YYPAAGGDGVWQTLECHLVPCRS*SSSVLS
Trigger: GGATAATACAGAGGAACTTCAACTTCTACAGGGAAC...CAAATGGCATTCCAGAGTCTGCCATACTCCGTCTCCTCCAGCTGCTGGATAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp CAATGTGGAGAAGACTGGGAGTCTACACTGGGAATGGTGCTGTGGACGCTCTGGTCTGTAAACTTGATATaGAATATTGCTGTTCCTGGA +
Preference number: 4 (lower is better)
Translates to: QCGEDWESTLGMVLWTLWSVNLI*NIAVPG
Trigger: TCCAGGAACAGCAATATTGCATATCAAGTTTACAGA...CCAGAGCGTCCACAGCACCATTCCCAGTGTAGACTCCCAGTCTTCTCCACATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp CCAGCAGCTGGAGGAGACGGAGTATGGCAGACTCTGGAATGCCATTTGTGTGAGTCTGTAAACTTGATATaGAATATTGCTGTTCCTGGA +
Preference number: 4 (lower is better)
Translates to: PAAGGDGVWQTLECHLCESVNLI*NIAVPG
Trigger: TCCAGGAACAGCAATATTGCATATCAAGTTTACAGA...CTCACACAAATGGCATTCCAGAGTCTGCCATACTCCGTCTCCTCCAGCTGCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp CTGCAGCCTGGCCAACCACTGTTCCCTGTAGAAGTTGAAGTTCCTCTGTATTATCACGTAATTTTGTACTaGTACAAAGTGCCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: LQPGQPLFPVEVEVPLYYHVILY*YKVPGQ
Trigger: CTGGCCTGGCACTTTGTAGCAGTACAAAATTACGTG...ATAATACAGAGGAACTTCAACTTCTACAGGGAACAGTGGTTGGCCAGGCTGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp GGTGCTGTGGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTCAGAAGCTTAGTAACATGTATTaGTCCAGATTCATCTCTCTT +
Preference number: 4 (lower is better)
Translates to: GAVDALGTEAQFGTSSQKLSNMY*SRFISL
Trigger: AAGAGAGATGAATCTGGAGCAATACATGTTACTAAG...CTTCTGAGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp CCTGGCCAACCACTGTTCCCTGTAGAAGTTGAAGTTCCTCTGTATTATCCAGCATTCTACCATCCGGTCTaGAACAATAGCCTTTCGCTT +
Preference number: 4 (lower is better)
Translates to: PGQPLFPVEVEVPLYYPAFYHPV*NNSLSL
Trigger: AAGCGAAAGGCTATTGTTGCAGACCGGATGGTAGAA...TGCTGGATAATACAGAGGAACTTCAACTTCTACAGGGAACAGTGGTTGGCCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp TATTATCCAGCAGCTGGAGGAGACGGAGTATGGCAGACTCTGGAATGCCATTTGCTTCAAATTGAACTATaGCTCCAGCCTGCAGCAATT +
Preference number: 4 (lower is better)
Translates to: YYPAAGGDGVWQTLECHLLQIEL*LQPAAI
Trigger: AATTGCTGCAGGCTGGAGGCATAGTTCAATTTGAAG...CAAATGGCATTCCAGAGTCTGCCATACTCCGTCTCCTCCAGCTGCTGGATAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp GGTTTTAACATGAACACATTAAAGGGAGATGGCCCTGGCCCCCACAGTGTCTGCCTCAATATGATCCATTaGTTTCTGCCATACAGACTG +
Preference number: 4 (lower is better)
Translates to: GFNMNTLKGDGPGPHSVCLNMIH*FLPYRL
Trigger: CAGTCTGTATGGCAGAAAGCAATGGATCATATTGAG...GCAGACACTGTGGGGGCCAGGGCCATCTCCCTTTAATGTGTTCATGTTAAAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp CCTGGCCAACCACTGTTCCCTGTAGAAGTTGAAGTTCCTCTGTATTATCCAGCATGGCGTCTCTTGTACTaGTGCAAACATATAGAGCAG +
Preference number: 4 (lower is better)
Translates to: PGQPLFPVEVEVPLYYPAWRLLY*CKHIEQ
Trigger: CTGCTCTATATGTTTGCAGCAGTACAAGAGACGCCA...TGCTGGATAATACAGAGGAACTTCAACTTCTACAGGGAACAGTGGTTGGCCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp TACCCATTACTGGAAGGTGATTCAGAATCAAAAATCCCCACCACCAACAACCGGTTGAATTTGTTGGCCTaGCTTCCTCTAGGCACCAGA +
Preference number: 4 (lower is better)
Translates to: YPLLEGDSESKIPTTNNRLNLLA*LPLGTR
Trigger: TCTGGTGCCTAGAGGAAGGCAGGCCAACAAATTCAA...CCGGTTGTTGGTGGTGGGGATTTTTGATTCTGAATCACCTTCCAGTAATGGGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424463.4
CDS-3UTR CCA 90 bp AAGACAAGAAGAGAGAGTACCAGCGTGCTTTCAATATCCCCTAGTTCTCTACAACTTCTTCGCTCGTCTTaGCACAGAGGCTCTGTTCCA +
Preference number: 4 (lower is better)
Translates to: KTRRESTSVLSISPSSLQLLRSS*HRGSVP
Trigger: TGGAACAGAGCCTCTGTGCCAAGACGAGCGAAGAAG...TTGTAGAGAACTAGGGGATATTGAAAGCACGCTGGTACTCTCTCTTCTTGTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424463.4
CDS-3UTR CCA 90 bp GGTTTTAACATGAACACATTAAAGGGAGATGGCCCTGGCCCCCACAGTGTCTGCTCTTCCTTTTTAAGTTaGTCCTGTCACCACTATCTG +
Preference number: 4 (lower is better)
Translates to: GFNMNTLKGDGPGPHSVCSSFLS*SCHHYL
Trigger: CAGATAGTGGTGACAGGACCAACTTAAAAAGGAAGA...GCAGACACTGTGGGGGCCAGGGCCATCTCCCTTTAATGTGTTCATGTTAAAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp CCTGGCCAACCACTGTTCCCTGTAGAAGTTGAAGTTCCTCTGTATTATCCAGCAGCTGCAGACACTATCTaGGCAGAAATTCCCTTCAAA +
Preference number: 4 (lower is better)
Translates to: PGQPLFPVEVEVPLYYPAAADTI*AEIPFK
Trigger: TTTGAAGGGAATTTCTGCCCAGATAGTGTCTGCAGC...TGCTGGATAATACAGAGGAACTTCAACTTCTACAGGGAACAGTGGTTGGCCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp ATAGGTTTTAACATGAACACATTAAAGGGAGATGGCCCTGGCCCCCACAGTGTCGCTGCAGACACTATCTaGGCAGAAATTCCCTTCAAA +
Preference number: 4 (lower is better)
Translates to: IGFNMNTLKGDGPGPHSVAADTI*AEIPFK
Trigger: TTTGAAGGGAATTTCTGCCCAGATAGTGTCTGCAGC...GACACTGTGGGGGCCAGGGCCATCTCCCTTTAATGTGTTCATGTTAAAACCTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp CAATGTGGAGAAGACTGGGAGTCTACACTGGGAATGGTGCTGTGGACGCTCTGGGCAAATTGCAAGAGTTaGATCATCTGTAAACTTGAT +
Preference number: 4 (lower is better)
Translates to: QCGEDWESTLGMVLWTLWANCKS*IICKLD
Trigger: ATCAAGTTTACAGATGATCCAACTCTTGCAATTTGC...CCAGAGCGTCCACAGCACCATTCCCAGTGTAGACTCCCAGTCTTCTCCACATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp GCTGGACAGAGGTATGTGACATTCCTTTGCTTAACAAGCAAAACAAAATCAATGCCAGCAGTGGCACACTaGAAGGATCCATCCGGCCAT +
Preference number: 4 (lower is better)
Translates to: AGQRYVTFLCLTSKTKSMPAVAH*KDPSGH
Trigger: ATGGCCGGATGGATCCTTCCAGTGTGCCACTGCTGG...CATTGATTTTGTTTTGCTTGTTAAGCAAAGGAATGTCACATACCTCTGTCCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp CCAGCAGCTGGAGGAGACGGAGTATGGCAGACTCTGGAATGCCATTTGTGTGAGAGAAATTCAAAAACCTaGTTTTTAACCAAGGGAACC +
Preference number: 4 (lower is better)
Translates to: PAAGGDGVWQTLECHLCERNSKT*FLTKGT
Trigger: GGTTCCCTTGGTTAAAAACCAGGTTTTTGAATTTCT...CTCACACAAATGGCATTCCAGAGTCTGCCATACTCCGTCTCCTCCAGCTGCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp ACAGCAATGTGGAGAAGACTGGGAGTCTACACTGGGAATGGTGCTGTGGACGCTTTACACAATGACCAATaGAGATCTTGGTTTAGAAGG +
Preference number: 4 (lower is better)
Translates to: TAMWRRLGVYTGNGAVDALHNDQ*RSWFRR
Trigger: CCTTCTAAACCAAGATCTCCATTGGTCATTGTGTAA...AGCGTCCACAGCACCATTCCCAGTGTAGACTCCCAGTCTTCTCCACATTGCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp CTAGGCTTCAGGGTAAATGGAAAAAGTCGCAATAGGCGAAATGTATTTCCTAAACATCTCTGGTTCTCCTaGGCCAGGCTCCATGGAGTC +
Preference number: 4 (lower is better)
Translates to: LGFRVNGKSRNRRNVFPKHLWFS*ARLHGV
Trigger: GACTCCATGGAGCCTGGCCCAGGAGAACCAGAGATG...TTTAGGAAATACATTTCGCCTATTGCGACTTTTTCCATTTACCCTGAAGCCTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp CAACCACTGTTCCCTGTAGAAGTTGAAGTTCCTCTGTATTATCCAGCAGCTGGACAATGTGGAGAAGACTaGGAGTCTACACTGGGAATG +
Preference number: 4 (lower is better)
Translates to: QPLFPVEVEVPLYYPAAGQCGED*ESTLGM
Trigger: CATTCCCAGTGTAGACTCCCAGTCTTCTCCACATTG...TCCAGCTGCTGGATAATACAGAGGAACTTCAACTTCTACAGGGAACAGTGGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp TGGGAATGGTGCTGTGGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTATTTCCTAAAAAGCTaGACAGAGGTATGTGACATT +
Preference number: 4 (lower is better)
Translates to: WEWCCGRSGHRSPIWNLFYFLKS*TEVCDI
Trigger: AATGTCACATACCTCTGTCCAGCTTTTTAGGAAATA...GAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACCATTCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp CTGCAGCCTGGCCAACCACTGTTCCCTGTAGAAGTTGAAGTTCCTCTGTATTATCAGTGGCTAGTGATTTaGAATGGCTGCTATTGTAGA +
Preference number: 4 (lower is better)
Translates to: LQPGQPLFPVEVEVPLYYQWLVI*NGCYCR
Trigger: TCTACAATAGCAGCCATTTCAAATCACTAGCCACTG...ATAATACAGAGGAACTTCAACTTCTACAGGGAACAGTGGTTGGCCAGGCTGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp CAACCACTGTTCCCTGTAGAAGTTGAAGTTCCTCTGTATTATCCAGCAGCTGGAGGCAGTAATCAACTATaGCAGGCACCATATCCTGAA +
Preference number: 4 (lower is better)
Translates to: QPLFPVEVEVPLYYPAAGGSNQL*QAPYPE
Trigger: TTCAGGATATGGTGCCTGTCATAGTTGATTACTGCC...TCCAGCTGCTGGATAATACAGAGGAACTTCAACTTCTACAGGGAACAGTGGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000625842.3
CDS-3UTR TCA 90 bp CCTGGCCAACCACTGTTCCCTGTAGAAGTTGAAGTTCCTCTGTATTATCCAGCAACGAGTTCCTCAATATaGTCCATTGCTTTCTGCCAT +
Preference number: 4 (lower is better)
Translates to: PGQPLFPVEVEVPLYYPATSSSI*SIAFCH
Trigger: ATGGCAGAAAGCAATGGATCATATTGAGGAACTCGT...TGCTGGATAATACAGAGGAACTTCAACTTCTACAGGGAACAGTGGTTGGCCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp TGTATTATCCAGCAGCTGGAGGAGACGGAGTATGGCAGACTCTGGAATGCCATTTTCAACATCCTTCAATaGGGGATCCTCTTTGGTATT +
Preference number: 4 (lower is better)
Translates to: CIIQQLEETEYGRLWNAIFNILQ*GILFGI
Trigger: AATACCAAAGAGGATCCCTCATTGAAGGATGTTGAA...AATGGCATTCCAGAGTCTGCCATACTCCGTCTCCTCCAGCTGCTGGATAATACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp TATTATCCAGCAGCTGGAGGAGACGGAGTATGGCAGACTCTGGAATGCCATTTGGATTCTTTGCAAGATTaGTGGAAGGGCAATAAATGC +
Preference number: 4 (lower is better)
Translates to: YYPAAGGDGVWQTLECHLDSLQD*WKGNKC
Trigger: GCATTTATTGCCCTTCCATCAATCTTGCAAAGAATC...CAAATGGCATTCCAGAGTCTGCCATACTCCGTCTCCTCCAGCTGCTGGATAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp ATAGGTTTTAACATGAACACATTAAAGGGAGATGGCCCTGGCCCCCACAGTGTCTCTCAGGTTACACAATaGCCAATGGAGATCTTGGTT +
Preference number: 4 (lower is better)
Translates to: IGFNMNTLKGDGPGPHSVSQVTQ*PMEILV
Trigger: AACCAAGATCTCCATTGGTCATTGTGTAACCTGAGA...GACACTGTGGGGGCCAGGGCCATCTCCCTTTAATGTGTTCATGTTAAAACCTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp TACCCATTACTGGAAGGTGATTCAGAATCAAAAATCCCCACCACCAACAACCGGATCTACTTTGTCAGCTaGAGACACTATCTGGGCAGA +
Preference number: 4 (lower is better)
Translates to: YPLLEGDSESKIPTTNNRIYFVS*RHYLGR
Trigger: TCTGCCCAGATAGTGTCTGCAGCTGACAAAGTAGAT...CCGGTTGTTGGTGGTGGGGATTTTTGATTCTGAATCACCTTCCAGTAATGGGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424463.4
CDS-3UTR GCA 90 bp ACAGCAATGTGGAGAAGACTGGGAGTCTACACTGGGAATGGTGCTGTGGACGCTTCTGTAAACTTGATATaGAATATTGCTGTTCCTGGA +
Preference number: 4 (lower is better)
Translates to: TAMWRRLGVYTGNGAVDASVNLI*NIAVPG
Trigger: TCCAGGAACAGCAATATTGCATATCAAGTTTACAGA...AGCGTCCACAGCACCATTCCCAGTGTAGACTCCCAGTCTTCTCCACATTGCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp TGTATTATCCAGCAGCTGGAGGAGACGGAGTATGGCAGACTCTGGAATGCCATTTCCCACTACTGCTTTTaGTTTTCCTTCATGGAAAGA +
Preference number: 4 (lower is better)
Translates to: CIIQQLEETEYGRLWNAISHYCF*FSFMER
Trigger: TCTTTCCATGAAGGAAAAGCAAAAGCAGTAGTGGGA...AATGGCATTCCAGAGTCTGCCATACTCCGTCTCCTCCAGCTGCTGGATAATACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp ATAGGTTTTAACATGAACACATTAAAGGGAGATGGCCCTGGCCCCCACAGTGTCCTTCAAATTGAACTATaGCTCCAGCCTGCAGCAATT +
Preference number: 4 (lower is better)
Translates to: IGFNMNTLKGDGPGPHSVLQIEL*LQPAAI
Trigger: AATTGCTGCAGGCTGGAGGCATAGTTCAATTTGAAG...GACACTGTGGGGGCCAGGGCCATCTCCCTTTAATGTGTTCATGTTAAAACCTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp ATAGGTTTTAACATGAACACATTAAAGGGAGATGGCCCTGGCCCCCACAGTGTCCAAAGTGCCTCACGTTaGTGCTGGTTCAAATTATGT +
Preference number: 4 (lower is better)
Translates to: IGFNMNTLKGDGPGPHSVQSASR*CWFKLC
Trigger: ACATAATTTGAACCAGCAGCAACGTGAGGCACTTTG...GACACTGTGGGGGCCAGGGCCATCTCCCTTTAATGTGTTCATGTTAAAACCTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp ATAGGTTTTAACATGAACACATTAAAGGGAGATGGCCCTGGCCCCCACAGTGTCTCAAATGCTTGGATTTaGTGTGGATCCAGAACAGGT +
Preference number: 4 (lower is better)
Translates to: IGFNMNTLKGDGPGPHSVSNAWI*CGSRTG
Trigger: ACCTGTTCTGGATCCACAGCAAATCCAAGCATTTGA...GACACTGTGGGGGCCAGGGCCATCTCCCTTTAATGTGTTCATGTTAAAACCTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp CCTGGCCAACCACTGTTCCCTGTAGAAGTTGAAGTTCCTCTGTATTATCCAGCATATGCTTTCCAGTGTTaGAGGAGTATCAACTTGAGG +
Preference number: 4 (lower is better)
Translates to: PGQPLFPVEVEVPLYYPAYAFQC*RSINLR
Trigger: CCTCAAGTTGATACTCCTCCAACACTGGAAAGCATA...TGCTGGATAATACAGAGGAACTTCAACTTCTACAGGGAACAGTGGTTGGCCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp TATTATCCAGCAGCTGGAGGAGACGGAGTATGGCAGACTCTGGAATGCCATTTGTCTTCCTTTTTAAGTTaGTCCTGTCACCACTATCTG +
Preference number: 4 (lower is better)
Translates to: YYPAAGGDGVWQTLECHLSSFLS*SCHHYL
Trigger: CAGATAGTGGTGACAGGACCAACTTAAAAAGGAAGA...CAAATGGCATTCCAGAGTCTGCCATACTCCGTCTCCTCCAGCTGCTGGATAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp ATGTATTTCCTAAAAAGCTGGACAGAGGTATGTGACATTCCTTTGCTTAACAAGCCAGCAGTGGCACACTaGAAGGATCCATCCGGCCAT +
Preference number: 4 (lower is better)
Translates to: MYFLKSWTEVCDIPLLNKPAVAH*KDPSGH
Trigger: ATGGCCGGATGGATCCTTCCAGTGTGCCACTGCTGG...CTTGTTAAGCAAAGGAATGTCACATACCTCTGTCCAGCTTTTTAGGAAATACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp ATGTATTTCCTAAAAAGCTGGACAGAGGTATGTGACATTCCTTTGCTTAACAAGGTGCCAGGCCAGCAGTaGCACACTGGAAGGATCCAT +
Preference number: 4 (lower is better)
Translates to: MYFLKSWTEVCDIPLLNKVPGQQ*HTGRIH
Trigger: ATGGATCCTTCCAGTGTGCCACTGCTGGCCTGGCAC...CTTGTTAAGCAAAGGAATGTCACATACCTCTGTCCAGCTTTTTAGGAAATACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp CAACCACTGTTCCCTGTAGAAGTTGAAGTTCCTCTGTATTATCCAGCAGCTGGATTTGCTTTTCCTTCATaGAAAGACCACGCAAGAGCC +
Preference number: 4 (lower is better)
Translates to: QPLFPVEVEVPLYYPAAGFAFPS*KDHARA
Trigger: GGCTCTTGCGTGGTCTTTCCATGAAGGAAAAGCAAA...TCCAGCTGCTGGATAATACAGAGGAACTTCAACTTCTACAGGGAACAGTGGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp TATTATCCAGCAGCTGGAGGAGACGGAGTATGGCAGACTCTGGAATGCCATTTGACTTGGATTTTTCCTTaGTCTGGGCACTTTTTCAGA +
Preference number: 4 (lower is better)
Translates to: YYPAAGGDGVWQTLECHLTWIFP*SGHFFR
Trigger: TCTGAAAAAGTGCCCAGACCAAGGAAAAATCCAAGT...CAAATGGCATTCCAGAGTCTGCCATACTCCGTCTCCTCCAGCTGCTGGATAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp TGTATTATCCAGCAGCTGGAGGAGACGGAGTATGGCAGACTCTGGAATGCCATTAAGTCTTTCATTACTTaGGGTGTGATTCCCACCAAT +
Preference number: 4 (lower is better)
Translates to: CIIQQLEETEYGRLWNAIKSFIT*GVIPTN
Trigger: ATTGGTGGGAATCACACCCCAAGTAATGAAAGACTT...AATGGCATTCCAGAGTCTGCCATACTCCGTCTCCTCCAGCTGCTGGATAATACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000625842.3
CDS-3UTR CCA 90 bp ATCCAGCAGCTGGAGGAGACGGAGTATGGCAGACTCTGGAATGCCATTTGTGTGAGAAATTCAAAAACCTaGTTTTTAACCAAGGGAACC +
Preference number: 4 (lower is better)
Translates to: IQQLEETEYGRLWNAICVRNSKT*FLTKGT
Trigger: GGTTCCCTTGGTTAAAAACCAGGTTTTTGAATTTCT...CACACAAATGGCATTCCAGAGTCTGCCATACTCCGTCTCCTCCAGCTGCTGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp ATAGGTTTTAACATGAACACATTAAAGGGAGATGGCCCTGGCCCCCACAGTGTCATGAATACCTTCCCTTaGGTCAAGAAGACTCCTCAA +
Preference number: 4 (lower is better)
Translates to: IGFNMNTLKGDGPGPHSVMNTFP*VKKTPQ
Trigger: TTGAGGAGTCTTCTTGACCCAAGGGAAGGTATTCAT...GACACTGTGGGGGCCAGGGCCATCTCCCTTTAATGTGTTCATGTTAAAACCTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp GCTGGACAGAGGTATGTGACATTCCTTTGCTTAACAAGCAAAACAAAATCAATGGAGGAATGGCTGAACTaGACAGCTTCTGAGGGGCCA +
Preference number: 4 (lower is better)
Translates to: AGQRYVTFLCLTSKTKSMEEWLN*TASEGP
Trigger: TGGCCCCTCAGAAGCTGTCCAGTTCAGCCATTCCTC...CATTGATTTTGTTTTGCTTGTTAAGCAAAGGAATGTCACATACCTCTGTCCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp CTGCAGCCTGGCCAACCACTGTTCCCTGTAGAAGTTGAAGTTCCTCTGTATTATGACCAATGGAGATCTTaGTTTAGAAGGCTGGTTGTT +
Preference number: 4 (lower is better)
Translates to: LQPGQPLFPVEVEVPLYYDQWRS*FRRLVV
Trigger: AACAACCAGCCTTCTAAACCAAGATCTCCATTGGTC...ATAATACAGAGGAACTTCAACTTCTACAGGGAACAGTGGTTGGCCAGGCTGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp CTAGGCTTCAGGGTAAATGGAAAAAGTCGCAATAGGCGAAATGTATTTCCTAAATCGCTGCTGCGATTCTaGGAGAGTTCCGTGAGGAGA +
Preference number: 4 (lower is better)
Translates to: LGFRVNGKSRNRRNVFPKSLLRF*ESSVRR
Trigger: TCTCCTCACGGAACTCTCCCAGAATCGCAGCAGCGA...TTTAGGAAATACATTTCGCCTATTGCGACTTTTTCCATTTACCCTGAAGCCTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp CAACCACTGTTCCCTGTAGAAGTTGAAGTTCCTCTGTATTATCCAGCAGCTGGAGAGTATGGCAGACTCTaGAATGCCATTTGTGTGAGT +
Preference number: 4 (lower is better)
Translates to: QPLFPVEVEVPLYYPAAGEYGRL*NAICVS
Trigger: ACTCACACAAATGGCATTCCAGAGTCTGCCATACTC...TCCAGCTGCTGGATAATACAGAGGAACTTCAACTTCTACAGGGAACAGTGGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp AAGACAAGAAGAGAGAGTACCAGCGTGCTTTCAATATCCCCTAGTTCTCTACAAGCTTCCTACGAGGCATaGGGAAGAGATGAGAACACA +
Preference number: 4 (lower is better)
Translates to: KTRRESTSVLSISPSSLQASYEA*GRDENT
Trigger: TGTGTTCTCATCTCTTCCCCATGCCTCGTAGGAAGC...TTGTAGAGAACTAGGGGATATTGAAAGCACGCTGGTACTCTCTCTTCTTGTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424463.4
CDS-3UTR TCA 90 bp CTGCAGCCTGGCCAACCACTGTTCCCTGTAGAAGTTGAAGTTCCTCTGTATTATGATTTTCCCAACACATaGGAACTACCTGCTGAATAT +
Preference number: 4 (lower is better)
Translates to: LQPGQPLFPVEVEVPLYYDFPNT*ELPAEY
Trigger: ATATTCAGCAGGTAGTTCTCATGTGTTGGGAAAATC...ATAATACAGAGGAACTTCAACTTCTACAGGGAACAGTGGTTGGCCAGGCTGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000625842.3
CDS-3UTR TCA 90 bp GAATACCCATTACTGGAAGGTGATTCAGAATCAAAAATCCCCACCACCAACAACTCTATTTGGCAAGCCTaGCAATGGAATCCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: EYPLLEGDSESKIPTTNNSIWQA*QWNPEL
Trigger: CAGCTCTGGATTCCATTGTCAGGCTTGCCAAATAGA...GTTGTTGGTGGTGGGGATTTTTGATTCTGAATCACCTTCCAGTAATGGGTATTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424463.4
CDS-3UTR TCA 90 bp TACCCATTACTGGAAGGTGATTCAGAATCAAAAATCCCCACCACCAACAACCGGCCCATTACTGGAAGGTaGTTCAGAATCAAAAATCCC +
Preference number: 4 (lower is better)
Translates to: YPLLEGDSESKIPTTNNRPITGR*FRIKNP
Trigger: GGGATTTTTGATTCTGAATCACCTTCCAGTAATGGG...CCGGTTGTTGGTGGTGGGGATTTTTGATTCTGAATCACCTTCCAGTAATGGGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000424463.4
CDS-3UTR TCA 90 bp TGTTGGAGGAGTATCAACTTGAGGAATATCAAACTCCTTGTCATCAATCTGTGGAGGTTGAAGCTTCAGTaGGCCATGTTTGCACCACTG +
Preference number: 4 (lower is better)
Translates to: CWRSINLRNIKLLVINLWRLKLQ*AMFAPL
Trigger: CAGTGGTGCAAACATGGCTCACTGAAGCTTCAACCT...CCACAGATTGATGACAAGGAGTTTGATATTCCTCAAGTTGATACTCCTCCAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424721.5
CDS-3UTR GCA 90 bp ATAGGTTTTAACATGAACACATTAAAGGGAGATGGCCCTGGCCCCCACAGTGTCTCCTGTAAGATTCTTTaGAAGATTGATGGAAGGGCA +
Preference number: 4 (lower is better)
Translates to: IGFNMNTLKGDGPGPHSVSCKIL*KIDGRA
Trigger: TGCCCTTCCATCAATCTTGCAAAGAATCTTACAGGA...GACACTGTGGGGGCCAGGGCCATCTCCCTTTAATGTGTTCATGTTAAAACCTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp CAACCACTGTTCCCTGTAGAAGTTGAAGTTCCTCTGTATTATCCAGCAGCTGGATCAAATGCTTGGATTTaGTGTGGATCCAGAACAGGT +
Preference number: 4 (lower is better)
Translates to: QPLFPVEVEVPLYYPAAGSNAWI*CGSRTG
Trigger: ACCTGTTCTGGATCCACAGCAAATCCAAGCATTTGA...TCCAGCTGCTGGATAATACAGAGGAACTTCAACTTCTACAGGGAACAGTGGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp CTAGGCTTCAGGGTAAATGGAAAAAGTCGCAATAGGCGAAATGTATTTCCTAAAAAAGCAGGAGCACTCTaGGAGCCACTGAATGGCCTA +
Preference number: 4 (lower is better)
Translates to: LGFRVNGKSRNRRNVFPKKAGAL*EPLNGL
Trigger: TAGGCCATTCAGTGGCTCGCAGAGTGCTCCTGCTTT...TTTAGGAAATACATTTCGCCTATTGCGACTTTTTCCATTTACCCTGAAGCCTAG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp TCCTTTTTAAGTTGGTCCTGTCACCACTATCTGAGCTTGCCACAGATGAAGTATTCAGTGAGCCATGTTTaGACCACTGTACTCCAACCT +
Preference number: 4 (lower is better)
Translates to: SFLSWSCHHYLSLPQMKYSVSHV*TTVLQP
Trigger: AGGTTGGAGTACAGTGGTGCAAACATGGCTCACTGA...ATACTTCATCTGTGGCAAGCTCAGATAGTGGTGACAGGACCAACTTAAAAAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424721.5
CDS-3UTR CCA 90 bp ATAGGTTTTAACATGAACACATTAAAGGGAGATGGCCCTGGCCCCCACAGTGTCCAATATTGCTGTTCCTaGAGGATGAGCATCTGTTAT +
Preference number: 4 (lower is better)
Translates to: IGFNMNTLKGDGPGPHSVQYCCS*RMSICY
Trigger: ATAACAGATGCTCATCCTCCAGGAACAGCAATATTG...GACACTGTGGGGGCCAGGGCCATCTCCCTTTAATGTGTTCATGTTAAAACCTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp ATAGGTTTTAACATGAACACATTAAAGGGAGATGGCCCTGGCCCCCACAGTGTCCCATACTTTCAAGGATaGTTTCAATCCAATGACCAG +
Preference number: 4 (lower is better)
Translates to: IGFNMNTLKGDGPGPHSVPYFQG*FQSNDQ
Trigger: CTGGTCATTGGATTGAAACCATCCTTGAAAGTATGG...GACACTGTGGGGGCCAGGGCCATCTCCCTTTAATGTGTTCATGTTAAAACCTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp ATGTATTTCCTAAAAAGCTGGACAGAGGTATGTGACATTCCTTTGCTTAACAAGGTCCAGAAAAGTGGGTaGCAACCAGCTCCGCAGCTT +
Preference number: 4 (lower is better)
Translates to: MYFLKSWTEVCDIPLLNKVQKSG*QPAPQL
Trigger: AAGCTGCGGAGCTGGTTGCCACCCACTTTTCTGGAC...CTTGTTAAGCAAAGGAATGTCACATACCTCTGTCCAGCTTTTTAGGAAATACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp TCCAAGGCATGCTTCAGTTATACTGCAGCCTGGCCAACCACTGTTCCCTGTAGATATTTCCTAAAAAGCTaGACAGAGGTATGTGACATT +
Preference number: 4 (lower is better)
Translates to: SKACFSYTAAWPTTVPCRYFLKS*TEVCDI
Trigger: AATGTCACATACCTCTGTCCAGCTTTTTAGGAAATA...TCTACAGGGAACAGTGGTTGGCCAGGCTGCAGTATAACTGAAGCATGCCTTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp CTAGGCTTCAGGGTAAATGGAAAAAGTCGCAATAGGCGAAATGTATTTCCTAAAGGAGGAGACGGAGTATaGCAGACTCTGGAATGCCAT +
Preference number: 4 (lower is better)
Translates to: LGFRVNGKSRNRRNVFPKGGDGV*QTLECH
Trigger: ATGGCATTCCAGAGTCTGCCATACTCCGTCTCCTCC...TTTAGGAAATACATTTCGCCTATTGCGACTTTTTCCATTTACCCTGAAGCCTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp TGTTGGAGGAGTATCAACTTGAGGAATATCAAACTCCTTGTCATCAATCTGTGGCTTGTCATCAATCTGTaGTCCCAGCTACTTGGGAGG +
Preference number: 4 (lower is better)
Translates to: CWRSINLRNIKLLVINLWLVINL*SQLLGR
Trigger: CCTCCCAAGTAGCTGGGACCACAGATTGATGACAAG...CCACAGATTGATGACAAGGAGTTTGATATTCCTCAAGTTGATACTCCTCCAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424721.5
CDS-3UTR TCA 90 bp TACCCATTACTGGAAGGTGATTCAGAATCAAAAATCCCCACCACCAACAACCGGCGCATAACTGATCCATaGAGTGAAAAAGAATCAGGT +
Preference number: 4 (lower is better)
Translates to: YPLLEGDSESKIPTTNNRRITDP*SEKESG
Trigger: ACCTGATTCTTTTTCACTTCATGGATCAGTTATGCG...CCGGTTGTTGGTGGTGGGGATTTTTGATTCTGAATCACCTTCCAGTAATGGGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000424463.4
CDS-3UTR TCA 90 bp AAGATCCTTTCGCTGCAGCAGAAGGCAGTAATCAACTATGACAGGCACCATATCGATTTTCCCAACACATaGGAACTACCTGCTGAATAT +
Preference number: 4 (lower is better)
Translates to: KILSLQQKAVINYDRHHIDFPNT*ELPAEY
Trigger: ATATTCAGCAGGTAGTTCTCATGTGTTGGGAAAATC...GATATGGTGCCTGTCATAGTTGATTACTGCCTTCTGCTGCAGCGAAAGGATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421069.5
CDS-3UTR TCA 90 bp CAACCACTGTTCCCTGTAGAAGTTGAAGTTCCTCTGTATTATCCAGCAGCTGGACCAATAGATAAGCGGTaGCTTCATGAAGTTGATACT +
Preference number: 4 (lower is better)
Translates to: QPLFPVEVEVPLYYPAAGPIDKR*LHEVDT
Trigger: AGTATCAACTTCATGAAGTCACCGCTTATCTATTGG...TCCAGCTGCTGGATAATACAGAGGAACTTCAACTTCTACAGGGAACAGTGGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp ATGTATTTCCTAAAAAGCTGGACAGAGGTATGTGACATTCCTTTGCTTAACAAGTCTGGAAGATGCTGTTaGAAGCAGGAGCACTCTGCG +
Preference number: 4 (lower is better)
Translates to: MYFLKSWTEVCDIPLLNKSGRCC*KQEHSA
Trigger: CGCAGAGTGCTCCTGCTTTCAACAGCATCTTCCAGA...CTTGTTAAGCAAAGGAATGTCACATACCTCTGTCCAGCTTTTTAGGAAATACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp TACCCATTACTGGAAGGTGATTCAGAATCAAAAATCCCCACCACCAACAACCGGCCTCTAGGCACCAGATaGCATACAAACTATTGTAAA +
Preference number: 4 (lower is better)
Translates to: YPLLEGDSESKIPTTNNRPLGTR*HTNYCK
Trigger: TTTACAATAGTTTGTATGTCATCTGGTGCCTAGAGG...CCGGTTGTTGGTGGTGGGGATTTTTGATTCTGAATCACCTTCCAGTAATGGGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424463.4
CDS-3UTR TCA 90 bp TCCTTTTTAAGTTGGTCCTGTCACCACTATCTGAGCTTGCCACAGATGAAGTATGACCCAGATCATTTTTaGACTCCAGTTCCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: SFLSWSCHHYLSLPQMKYDPDHF*TPVPCP
Trigger: TGGACAAGGAACTGGAGTTCAAAAATGATCTGGGTC...ATACTTCATCTGTGGCAAGCTCAGATAGTGGTGACAGGACCAACTTAAAAAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000424721.5
CDS-3UTR TCA 90 bp TTTCAGAGTGTCGGGAGTCATCGTCAGGACTACAAAGGAATTCAAGGACCTGATACCATAACATTTATCTaGCATCTACTGGGTTACAGG +
Preference number: 4 (lower is better)
Translates to: FQSVGSHRQDYKGIQGPDTITFI*HLLGYR
Trigger: CCTGTAACCCAGTAGATGTCAGATAAATGTTATGGT...ATCAGGTCCTTGAATTCCTTTGTAGTCCTGACGATGACTCCCGACACTCTGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452140.5
CDS-3UTR GCA 90 bp ATGTATTTCCTAAAAAGCTGGACAGAGGTATGTGACATTCCTTTGCTTAACAAGAGACTGCTTCTCCTCTaGACTGTGTCCGGGAATGGA +
Preference number: 4 (lower is better)
Translates to: MYFLKSWTEVCDIPLLNKRLLLL*TVSGNG
Trigger: TCCATTCCCGGACACAGTGCAGAGGAGAAGCAGTCT...CTTGTTAAGCAAAGGAATGTCACATACCTCTGTCCAGCTTTTTAGGAAATACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp CAACCACTGTTCCCTGTAGAAGTTGAAGTTCCTCTGTATTATCCAGCAGCTGGATCCTGTAAGATTCTTTaGAAGATTGATGGAAGGGCA +
Preference number: 4 (lower is better)
Translates to: QPLFPVEVEVPLYYPAAGSCKIL*KIDGRA
Trigger: TGCCCTTCCATCAATCTTGCAAAGAATCTTACAGGA...TCCAGCTGCTGGATAATACAGAGGAACTTCAACTTCTACAGGGAACAGTGGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp TACCCATTACTGGAAGGTGATTCAGAATCAAAAATCCCCACCACCAACAACCGGTCTTCCTTTTTAAGTTaGTCCTGTCACCACTATCTG +
Preference number: 4 (lower is better)
Translates to: YPLLEGDSESKIPTTNNRSSFLS*SCHHYL
Trigger: CAGATAGTGGTGACAGGACCAACTTAAAAAGGAAGA...CCGGTTGTTGGTGGTGGGGATTTTTGATTCTGAATCACCTTCCAGTAATGGGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000424463.4
CDS-3UTR CCA 90 bp GAATACCCATTACTGGAAGGTGATTCAGAATCAAAAATCCCCACCACCAACAACGCTGCAGACACTATCTaGGCAGAAATTCCCTTCAAA +
Preference number: 4 (lower is better)
Translates to: EYPLLEGDSESKIPTTNNAADTI*AEIPFK
Trigger: TTTGAAGGGAATTTCTGCCCAGATAGTGTCTGCAGC...GTTGTTGGTGGTGGGGATTTTTGATTCTGAATCACCTTCCAGTAATGGGTATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424463.4
CDS-3UTR CCA 90 bp CAACCACTGTTCCCTGTAGAAGTTGAAGTTCCTCTGTATTATCCAGCAGCTGGATGCAGAAGGCAAGCATaGGATTCACGTAATTTTGTA +
Preference number: 4 (lower is better)
Translates to: QPLFPVEVEVPLYYPAAGCRRQA*DSRNFV
Trigger: TACAAAATTACGTGAATCCCATGCTTGCCTTCTGCA...TCCAGCTGCTGGATAATACAGAGGAACTTCAACTTCTACAGGGAACAGTGGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp TGTTTTTCCTGCATTCAGAGGAGGAGCAATGACTCTGAAAAGTTTCTCCATTGGTTTGCTTTTCCTTCATaGAAAGACCACGCAAGAGCC +
Preference number: 4 (lower is better)
Translates to: CFSCIQRRSNDSEKFLHWFAFPS*KDHARA
Trigger: GGCTCTTGCGTGGTCTTTCCATGAAGGAAAAGCAAA...CCAATGGAGAAACTTTTCAGAGTCATTGCTCCTCCTCTGAATGCAGGAAAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000458721.5
CDS-3UTR CCA 90 bp AAGATCCTTTCGCTGCAGCAGAAGGCAGTAATCAACTATGACAGGCACCATATCAAGTCTTTCATTACTTaGGGTGTGATTCCCACCAAT +
Preference number: 4 (lower is better)
Translates to: KILSLQQKAVINYDRHHIKSFIT*GVIPTN
Trigger: ATTGGTGGGAATCACACCCCAAGTAATGAAAGACTT...GATATGGTGCCTGTCATAGTTGATTACTGCCTTCTGCTGCAGCGAAAGGATCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421069.5
CDS-3UTR CCA 90 bp ATGTATTTCCTAAAAAGCTGGACAGAGGTATGTGACATTCCTTTGCTTAACAAGATCCTCAGTCACAGGTaGAGGAATGAGCTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: MYFLKSWTEVCDIPLLNKILSHR*RNELQL
Trigger: CAGCTGCAGCTCATTCCTCCACCTGTGACTGAGGAT...CTTGTTAAGCAAAGGAATGTCACATACCTCTGTCCAGCTTTTTAGGAAATACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp GAATACCCATTACTGGAAGGTGATTCAGAATCAAAAATCCCCACCACCAACAACATTAAAGCCAATCCATaGGATGTACCCACTGCTATC +
Preference number: 4 (lower is better)
Translates to: EYPLLEGDSESKIPTTNNIKANP*DVPTAI
Trigger: GATAGCAGTGGGTACATCTCATGGATTGGCTTTAAT...GTTGTTGGTGGTGGGGATTTTTGATTCTGAATCACCTTCCAGTAATGGGTATTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424463.4
CDS-3UTR GCA 90 bp CCTGGCCAACCACTGTTCCCTGTAGAAGTTGAAGTTCCTCTGTATTATCCAGCACTTAGTAACATGTATTaGTCCAGATTCATCTCTCTT +
Preference number: 4 (lower is better)
Translates to: PGQPLFPVEVEVPLYYPALSNMY*SRFISL
Trigger: AAGAGAGATGAATCTGGAGCAATACATGTTACTAAG...TGCTGGATAATACAGAGGAACTTCAACTTCTACAGGGAACAGTGGTTGGCCAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp ATGTATTTCCTAAAAAGCTGGACAGAGGTATGTGACATTCCTTTGCTTAACAAGTCCAACCAAAGCCAGTaGCTGGCTAACATTTCCTCC +
Preference number: 4 (lower is better)
Translates to: MYFLKSWTEVCDIPLLNKSNQSQ*LANISS
Trigger: GGAGGAAATGTTAGCCAGGCACTGGCTTTGGTTGGA...CTTGTTAAGCAAAGGAATGTCACATACCTCTGTCCAGCTTTTTAGGAAATACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp GCTGGACAGAGGTATGTGACATTCCTTTGCTTAACAAGCAAAACAAAATCAATGTGGCAGACTCTGGAATaGCATTTGTGTGAGTTCCAC +
Preference number: 4 (lower is better)
Translates to: AGQRYVTFLCLTSKTKSMWQTLE*HLCEFH
Trigger: GTGGAACTCACACAAATGGCATTCCAGAGTCTGCCA...CATTGATTTTGTTTTGCTTGTTAAGCAAAGGAATGTCACATACCTCTGTCCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp AAGACAAGAAGAGAGAGTACCAGCGTGCTTTCAATATCCCCTAGTTCTCTACAATATGCTTTCCAGTGTTaGAGGAGTATCAACTTGAGG +
Preference number: 4 (lower is better)
Translates to: KTRRESTSVLSISPSSLQYAFQC*RSINLR
Trigger: CCTCAAGTTGATACTCCTCCAACACTGGAAAGCATA...TTGTAGAGAACTAGGGGATATTGAAAGCACGCTGGTACTCTCTCTTCTTGTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424463.4
CDS-3UTR CCA 90 bp TGTTGGAGGAGTATCAACTTGAGGAATATCAAACTCCTTGTCATCAATCTGTGGGCTGCAGACACTATCTaGGCAGAAATTCCCTTCAAA +
Preference number: 4 (lower is better)
Translates to: CWRSINLRNIKLLVINLWAADTI*AEIPFK
Trigger: TTTGAAGGGAATTTCTGCCCAGATAGTGTCTGCAGC...CCACAGATTGATGACAAGGAGTTTGATATTCCTCAAGTTGATACTCCTCCAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424721.5
CDS-3UTR CCA 90 bp CTGCAGCCTGGCCAACCACTGTTCCCTGTAGAAGTTGAAGTTCCTCTGTATTATAGAAATTCAAAAACCTaGTTTTTAACCAAGGGAACC +
Preference number: 4 (lower is better)
Translates to: LQPGQPLFPVEVEVPLYYRNSKT*FLTKGT
Trigger: GGTTCCCTTGGTTAAAAACCAGGTTTTTGAATTTCT...ATAATACAGAGGAACTTCAACTTCTACAGGGAACAGTGGTTGGCCAGGCTGCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp GCTGGACAGAGGTATGTGACATTCCTTTGCTTAACAAGCAAAACAAAATCAATGCAATGTGGAGAAGACTaGGAGTCTACACTGGGAATG +
Preference number: 4 (lower is better)
Translates to: AGQRYVTFLCLTSKTKSMQCGED*ESTLGM
Trigger: CATTCCCAGTGTAGACTCCCAGTCTTCTCCACATTG...CATTGATTTTGTTTTGCTTGTTAAGCAAAGGAATGTCACATACCTCTGTCCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp CACCATAACATTTATCTGACATCTACTGGGTTACAGGCATTGTGCTGGATCTGTTTACAGGCATTGTGCTaGATCTGTTCTAGGCATGTT +
Preference number: 4 (lower is better)
Translates to: HHNIYLTSTGLQALCWICLQALC*ICSRHV
Trigger: AACATGCCTAGAACAGATCCAGCACAATGCCTGTAA...ACAGATCCAGCACAATGCCTGTAACCCAGTAGATGTCAGATAAATGTTATGGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452140.5
CDS-3UTR CCA 90 bp CACCATAACATTTATCTGACATCTACTGGGTTACAGGCATTGTGCTGGATCTGTTTATCTGACATCTACTaGGTTACAGGCATTGTGCTG +
Preference number: 4 (lower is better)
Translates to: HHNIYLTSTGLQALCWICLSDIY*VTGIVL
Trigger: CAGCACAATGCCTGTAACCCAGTAGATGTCAGATAA...ACAGATCCAGCACAATGCCTGTAACCCAGTAGATGTCAGATAAATGTTATGGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452140.5
3UTR CAA 72 bp TCCTTTTTAAGTTGGTCCTGTCACCACTATCTGAGCTaGCCACAGATGAAGTATCATAGGAGTGAGAATCAA +
Preference number: 4 (lower is better)
Translates to: SFLSWSCHHYLS*PQMKYHRSENQ
Trigger: TTGATTCTCACTCCTATGATACTTCATCTGTGGCAAGCTCAGATAGTGGTGACAGGACCAACTTAAAAAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424721.5
CDS-3UTR TCA 90 bp AAGACAAGAAGAGAGAGTACCAGCGTGCTTTCAATATCCCCTAGTTCTCTACAACAATCAGATCATTTTTaGACTCCAGTTCCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: KTRRESTSVLSISPSSLQQSDHF*TPVPCP
Trigger: TGGACAAGGAACTGGAGTTCAAAAATGATCTGATTG...TTGTAGAGAACTAGGGGATATTGAAAGCACGCTGGTACTCTCTCTTCTTGTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424463.4
CDS-3UTR TCA 90 bp TCCTTTTTAAGTTGGTCCTGTCACCACTATCTGAGCTTGCCACAGATGAAGTATCGCATAACTGATCCATaGAGTGAAAAAGAATCAGGT +
Preference number: 4 (lower is better)
Translates to: SFLSWSCHHYLSLPQMKYRITDP*SEKESG
Trigger: ACCTGATTCTTTTTCACTTCATGGATCAGTTATGCG...ATACTTCATCTGTGGCAAGCTCAGATAGTGGTGACAGGACCAACTTAAAAAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000424721.5
CDS-3UTR TCA 90 bp CTAGGCTTCAGGGTAAATGGAAAAAGTCGCAATAGGCGAAATGTATTTCCTAAAGCTGTTCCTGGAGGATaGGCATCTGTTATTGATCTT +
Preference number: 4 (lower is better)
Translates to: LGFRVNGKSRNRRNVFPKAVPGG*ASVIDL
Trigger: AAGATCAATAACAGATGCTCATCCTCCAGGAACAGC...TTTAGGAAATACATTTCGCCTATTGCGACTTTTTCCATTTACCCTGAAGCCTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp CCTGCTAGACAACAGCTAATATATACAAGGAGCTTATTGCCCATAACAACTTGTGGCAGTAATCAACTATaGCAGGCACCATATCCTGAA +
Preference number: 4 (lower is better)
Translates to: PARQQLIYTRSLLPITTCGSNQL*QAPYPE
Trigger: TTCAGGATATGGTGCCTGTCATAGTTGATTACTGCC...ACAAGTTGTTATGGGCAATAAGCTCCTTGTATATATTAGCTGTTGTCTAGCAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458721.5
CDS-3UTR TCA 90 bp ACTTCTCTAGTTTATCCGCAGGGGCCTAAAGCCATCCAAAGTGTTCAAAACTCAAGGCAAAACGGGAAATaGAACTCAGGACATTTTATT +
Preference number: 4 (lower is better)
Translates to: TSLVYPQGPKAIQSVQNSRQNGK*NSGHFI
Trigger: AATAAAATGTCCTGAGTTTCATTTCCCGTTTTGCCT...TGAGTTTTGAACACTTTGGATGGCTTTAGGCCCCTGCGGATAAACTAGAGAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000424463.4
CDS-3UTR TCA 90 bp AAGACAAGAAGAGAGAGTACCAGCGTGCTTTCAATATCCCCTAGTTCTCTACAAAGACTGGATACTGCCTaGAAACAAAAGGGAAGATTA +
Preference number: 4 (lower is better)
Translates to: KTRRESTSVLSISPSSLQRLDTA*KQKGRL
Trigger: TAATCTTCCCTTTTGTTTTCAGGCAGTATCCAGTCT...TTGTAGAGAACTAGGGGATATTGAAAGCACGCTGGTACTCTCTCTTCTTGTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424463.4
CDS-3UTR GCA 90 bp CTAGGCTTCAGGGTAAATGGAAAAAGTCGCAATAGGCGAAATGTATTTCCTAAATATCAGACTGGATACTaGAATTGCTGTAGGCAAGCC +
Preference number: 4 (lower is better)
Translates to: LGFRVNGKSRNRRNVFPKYQTGY*NCCRQA
Trigger: GGCTTGCCTACAGCAATTGCAGTATCCAGTCTGATA...TTTAGGAAATACATTTCGCCTATTGCGACTTTTTCCATTTACCCTGAAGCCTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp TCCAAAGTGTTCAAAACTCACCCACTTCCTTACCAAAGACTGACTAAAAGGAATATGAGATGTACCCACTaGTATCAGACTGGATACTGC +
Preference number: 4 (lower is better)
Translates to: SKVFKTHPLPYQRLTKRNMRCTH*YQTGYC
Trigger: GCAGTATCCAGTCTGATAGCAGTGGGTACATCTCAT...ATTCCTTTTAGTCAGTCTTTGGTAAGGAAGTGGGTGAGTTTTGAACACTTTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424463.4
CDS-3UTR GCA 90 bp GCTGGACAGAGGTATGTGACATTCCTTTGCTTAACAAGCAAAACAAAATCAATGCACGTAATTTTGTACTaGTACAAAGTGCCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: AGQRYVTFLCLTSKTKSMHVILY*YKVPGQ
Trigger: CTGGCCTGGCACTTTGTAGCAGTACAAAATTACGTG...CATTGATTTTGTTTTGCTTGTTAAGCAAAGGAATGTCACATACCTCTGTCCAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp CTAGGCTTCAGGGTAAATGGAAAAAGTCGCAATAGGCGAAATGTATTTCCTAAATGGCGTCTCTTGTACTaGTGCAAACATATAGAGCAG +
Preference number: 4 (lower is better)
Translates to: LGFRVNGKSRNRRNVFPKWRLLY*CKHIEQ
Trigger: CTGCTCTATATGTTTGCAGCAGTACAAGAGACGCCA...TTTAGGAAATACATTTCGCCTATTGCGACTTTTTCCATTTACCCTGAAGCCTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp ATGTATTTCCTAAAAAGCTGGACAGAGGTATGTGACATTCCTTTGCTTAACAAGATGCTTCAGTTATACTaGAGCCTGGCCAACCACTGT +
Preference number: 4 (lower is better)
Translates to: MYFLKSWTEVCDIPLLNKMLQLY*SLANHC
Trigger: ACAGTGGTTGGCCAGGCTGCAGTATAACTGAAGCAT...CTTGTTAAGCAAAGGAATGTCACATACCTCTGTCCAGCTTTTTAGGAAATACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp CTAGGCTTCAGGGTAAATGGAAAAAGTCGCAATAGGCGAAATGTATTTCCTAAAGCTGCAGACACTATCTaGGCAGAAATTCCCTTCAAA +
Preference number: 4 (lower is better)
Translates to: LGFRVNGKSRNRRNVFPKAADTI*AEIPFK
Trigger: TTTGAAGGGAATTTCTGCCCAGATAGTGTCTGCAGC...TTTAGGAAATACATTTCGCCTATTGCGACTTTTTCCATTTACCCTGAAGCCTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp CTAGGCTTCAGGGTAAATGGAAAAAGTCGCAATAGGCGAAATGTATTTCCTAAATTTGCTTTTCCTTCATaGAAAGACCACGCAAGAGCC +
Preference number: 4 (lower is better)
Translates to: LGFRVNGKSRNRRNVFPKFAFPS*KDHARA
Trigger: GGCTCTTGCGTGGTCTTTCCATGAAGGAAAAGCAAA...TTTAGGAAATACATTTCGCCTATTGCGACTTTTTCCATTTACCCTGAAGCCTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp CTAGGCTTCAGGGTAAATGGAAAAAGTCGCAATAGGCGAAATGTATTTCCTAAAGATTTTTCCTTGGTCTaGGCACTTTTTCAGAGCTCG +
Preference number: 4 (lower is better)
Translates to: LGFRVNGKSRNRRNVFPKDFSLV*ALFQSS
Trigger: CGAGCTCTGAAAAAGTGCCCAGACCAAGGAAAAATC...TTTAGGAAATACATTTCGCCTATTGCGACTTTTTCCATTTACCCTGAAGCCTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp CCTGCTAGACAACAGCTAATATATACAAGGAGCTTATTGCCCATAACAACTTGTGATTTTTCCTTGGTCTaGGCACTTTTTCAGAGCTCG +
Preference number: 4 (lower is better)
Translates to: PARQQLIYTRSLLPITTCDFSLV*ALFQSS
Trigger: CGAGCTCTGAAAAAGTGCCCAGACCAAGGAAAAATC...ACAAGTTGTTATGGGCAATAAGCTCCTTGTATATATTAGCTGTTGTCTAGCAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000458721.5
CDS-3UTR CCA 90 bp TGTTTTTCCTGCATTCAGAGGAGGAGCAATGACTCTGAAAAGTTTCTCCATTGGAAGTCTTTCATTACTTaGGGTGTGATTCCCACCAAT +
Preference number: 4 (lower is better)
Translates to: CFSCIQRRSNDSEKFLHWKSFIT*GVIPTN
Trigger: ATTGGTGGGAATCACACCCCAAGTAATGAAAGACTT...CCAATGGAGAAACTTTTCAGAGTCATTGCTCCTCCTCTGAATGCAGGAAAAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458721.5
CDS-3UTR TCA 90 bp ATGTATTTCCTAAAAAGCTGGACAGAGGTATGTGACATTCCTTTGCTTAACAAGGCTGTTCCTGGAGGATaGGCATCTGTTATTGATCTT +
Preference number: 4 (lower is better)
Translates to: MYFLKSWTEVCDIPLLNKAVPGG*ASVIDL
Trigger: AAGATCAATAACAGATGCTCATCCTCCAGGAACAGC...CTTGTTAAGCAAAGGAATGTCACATACCTCTGTCCAGCTTTTTAGGAAATACAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp CTAGGCTTCAGGGTAAATGGAAAAAGTCGCAATAGGCGAAATGTATTTCCTAAATCATTACTTGGGGTGTaGTTCCCACCAATTTATCAC +
Preference number: 4 (lower is better)
Translates to: LGFRVNGKSRNRRNVFPKSLLGV*FPPIYH
Trigger: GTGATAAATTGGTGGGAATCACACCCCAAGTAATGA...TTTAGGAAATACATTTCGCCTATTGCGACTTTTTCCATTTACCCTGAAGCCTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000625842.3
CDS-3UTR TCA 90 bp ATGTATTTCCTAAAAAGCTGGACAGAGGTATGTGACATTCCTTTGCTTAACAAGATCCAGAACAGGTTCTaGGGTTCCCTTTTTAGCAGT +
Preference number: 4 (lower is better)
Translates to: MYFLKSWTEVCDIPLLNKIQNRF*GSLFSS
Trigger: ACTGCTAAAAAGGGAACCTCAGAACCTGTTCTGGAT...CTTGTTAAGCAAAGGAATGTCACATACCTCTGTCCAGCTTTTTAGGAAATACAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp CCCACCAATTTATCACTTAAAATATATGGCTCAAGGCACTCCAAAAATACTCCTATCCTCATGACCAAGTaGGGTTTATTCCAGGATGCA +
Preference number: 4 (lower is better)
Translates to: PTNLSLKIYGSRHSKNTPILMTK*GLFQDA
Trigger: TGCATCCTGGAATAAACCTCACTTGGTCATGAGGAT...AGGAGTATTTTTGGAGTGCCTTGAGCCATATATTTTAAGTGATAAATTGGTGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421069.5
CDS-3UTR TCA 90 bp AGGCTGGTGATATCCATATGTACAATGAGCGCTTCCACATTTTCCATTAATTTTGGCAGTAATCAACTATaGCAGGCACCATATCCTCAT +
Preference number: 4 (lower is better)
Translates to: RLVISICTMSASTFSINFGSNQL*QAPYPH
Trigger: ATGAGGATATGGTGCCTGTCATAGTTGATTACTGCC...AAAATTAATGGAAAATGTGGAAGCGCTCATTGTACATATGGATATCACCAGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421069.5
CDS-3UTR TCA 90 bp GAATACCCATTACTGGAAGGTGATTCAGAATCAAAAATCCCCACCACCAACAACAAAGCTTATTGTCAGTaGGAGCTCCTGAAAATTACT +
Preference number: 4 (lower is better)
Translates to: EYPLLEGDSESKIPTTNNKAYCQ*ELLKIT
Trigger: AGTAATTTTCAGGAGCTCTCACTGACAATAAGCTTT...GTTGTTGGTGGTGGGGATTTTTGATTCTGAATCACCTTCCAGTAATGGGTATTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000424463.4
CDS-3UTR GCA 90 bp GCTGGACAGAGGTATGTGACATTCCTTTGCTTAACAAGCAAAACAAAATCAATGCTTGATATGCAATATTaGTGTTCCTGGAGGATGAGC +
Preference number: 4 (lower is better)
Translates to: AGQRYVTFLCLTSKTKSMLDMQY*CSWRMS
Trigger: GCTCATCCTCCAGGAACAGCAATATTGCATATCAAG...CATTGATTTTGTTTTGCTTGTTAAGCAAAGGAATGTCACATACCTCTGTCCAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp GCTGGACAGAGGTATGTGACATTCCTTTGCTTAACAAGCAAAACAAAATCAATGGCTGTCGTTGCAAATTaGAAGAGTTGGATCATCTGT +
Preference number: 4 (lower is better)
Translates to: AGQRYVTFLCLTSKTKSMAVVAN*KSWIIC
Trigger: ACAGATGATCCAACTCTTGCAATTTGCAACGACAGC...CATTGATTTTGTTTTGCTTGTTAAGCAAAGGAATGTCACATACCTCTGTCCAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp ATGTATTTCCTAAAAAGCTGGACAGAGGTATGTGACATTCCTTTGCTTAACAAGCACGTAATTTTGTACTaGTACAAAGTGCCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: MYFLKSWTEVCDIPLLNKHVILY*YKVPGQ
Trigger: CTGGCCTGGCACTTTGTAGCAGTACAAAATTACGTG...CTTGTTAAGCAAAGGAATGTCACATACCTCTGTCCAGCTTTTTAGGAAATACAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp GAATACCCATTACTGGAAGGTGATTCAGAATCAAAAATCCCCACCACCAACAACAGTTCTCTACAATACTaGAACAGAGTTCTATTTGGC +
Preference number: 4 (lower is better)
Translates to: EYPLLEGDSESKIPTTNNSSLQY*NRVLFG
Trigger: GCCAAATAGAACTCTGTTGCAGTATTGTAGAGAACT...GTTGTTGGTGGTGGGGATTTTTGATTCTGAATCACCTTCCAGTAATGGGTATTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424463.4
CDS-3UTR CCA 90 bp CTAGGCTTCAGGGTAAATGGAAAAAGTCGCAATAGGCGAAATGTATTTCCTAAATATGCTTTCCAGTGTTaGAGGAGTATCAACTTGAGG +
Preference number: 4 (lower is better)
Translates to: LGFRVNGKSRNRRNVFPKYAFQC*RSINLR
Trigger: CCTCAAGTTGATACTCCTCCAACACTGGAAAGCATA...TTTAGGAAATACATTTCGCCTATTGCGACTTTTTCCATTTACCCTGAAGCCTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp TGTTGGAGGAGTATCAACTTGAGGAATATCAAACTCCTTGTCATCAATCTGTGGTCTTCCTTTTTAAGTTaGTCCTGTCACCACTATCTG +
Preference number: 4 (lower is better)
Translates to: CWRSINLRNIKLLVINLWSSFLS*SCHHYL
Trigger: CAGATAGTGGTGACAGGACCAACTTAAAAAGGAAGA...CCACAGATTGATGACAAGGAGTTTGATATTCCTCAAGTTGATACTCCTCCAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424721.5
CDS-3UTR CCA 90 bp ATGTATTTCCTAAAAAGCTGGACAGAGGTATGTGACATTCCTTTGCTTAACAAGGATTTTTCCTTGGTCTaGGCACTTTTTCAGAGCTCG +
Preference number: 4 (lower is better)
Translates to: MYFLKSWTEVCDIPLLNKDFSLV*ALFQSS
Trigger: CGAGCTCTGAAAAAGTGCCCAGACCAAGGAAAAATC...CTTGTTAAGCAAAGGAATGTCACATACCTCTGTCCAGCTTTTTAGGAAATACAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp CCCACCAATTTATCACTTAAAATATATGGCTCAAGGCACTCCAAAAATACTCCTGATTTTTCCTTGGTCTaGGCACTTTTTCAGAGCTCG +
Preference number: 4 (lower is better)
Translates to: PTNLSLKIYGSRHSKNTPDFSLV*ALFQSS
Trigger: CGAGCTCTGAAAAAGTGCCCAGACCAAGGAAAAATC...AGGAGTATTTTTGGAGTGCCTTGAGCCATATATTTTAAGTGATAAATTGGTGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000421069.5
ENST00000458721.5
CDS-3UTR TCA 90 bp ATGTATTTCCTAAAAAGCTGGACAGAGGTATGTGACATTCCTTTGCTTAACAAGGGAGGAGTATCAACTTaGGGAATATCAAACTCCTTG +
Preference number: 4 (lower is better)
Translates to: MYFLKSWTEVCDIPLLNKGGVST*GISNSL
Trigger: CAAGGAGTTTGATATTCCTCAAGTTGATACTCCTCC...CTTGTTAAGCAAAGGAATGTCACATACCTCTGTCCAGCTTTTTAGGAAATACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp CCCACCAATTTATCACTTAAAATATATGGCTCAAGGCACTCCAAAAATACTCCTATGAGAACTACCTGCTaGATATCTAGGCTGGTGATA +
Preference number: 4 (lower is better)
Translates to: PTNLSLKIYGSRHSKNTPMRTTC*ISRLVI
Trigger: TATCACCAGCCTAGATATTCAGCAGGTAGTTCTCAT...AGGAGTATTTTTGGAGTGCCTTGAGCCATATATTTTAAGTGATAAATTGGTGGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000421069.5
ENST00000458721.5
CDS-3UTR TCA 90 bp TCCAAAGTGTTCAAAACTCACCCACTTCCTTACCAAAGACTGACTAAAAGGAATGAAAGCCTGTTTTCCTaGAGATCTTTTAGAATACCC +
Preference number: 4 (lower is better)
Translates to: SKVFKTHPLPYQRLTKRNESLFS*RSFRIP
Trigger: GGGTATTCTAAAAGATCTTCAGGAAAACAGGCTTTC...ATTCCTTTTAGTCAGTCTTTGGTAAGGAAGTGGGTGAGTTTTGAACACTTTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000424463.4
CDS-3UTR GCA 90 bp CTAGGCTTCAGGGTAAATGGAAAAAGTCGCAATAGGCGAAATGTATTTCCTAAAAATTCCTCTTGTGTTTaGCGATCAATCACATGCAAC +
Preference number: 4 (lower is better)
Translates to: LGFRVNGKSRNRRNVFPKNSSCV*RSITCN
Trigger: GTTGCATGTGATTGATCGGCAAACACAAGAGGAATT...TTTAGGAAATACATTTCGCCTATTGCGACTTTTTCCATTTACCCTGAAGCCTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR GCA 90 bp CCTGCTAGACAACAGCTAATATATACAAGGAGCTTATTGCCCATAACAACTTGTTCCCACTACTGCTTTTaGTTTTCCTTCATGGAAAGA +
Preference number: 4 (lower is better)
Translates to: PARQQLIYTRSLLPITTCSHYCF*FSFMER
Trigger: TCTTTCCATGAAGGAAAAGCAAAAGCAGTAGTGGGA...ACAAGTTGTTATGGGCAATAAGCTCCTTGTATATATTAGCTGTTGTCTAGCAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458721.5
CDS-3UTR GCA 90 bp CCACCAATTTATCACTTAAAATATATGGCTCAAGGCACTCCAAAAATACTCCTTTTCTACCATCCGGTCTaGAACAATAGCCTTTCGCTT +
Preference number: 4 (lower is better)
Translates to: PPIYHLKYMAQGTPKILLFYHPV*NNSLSL
Trigger: AAGCGAAAGGCTATTGTTGCAGACCGGATGGTAGAA...AAGGAGTATTTTTGGAGTGCCTTGAGCCATATATTTTAAGTGATAAATTGGTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000458721.5
CDS-3UTR CCA 90 bp CTAGGCTTCAGGGTAAATGGAAAAAGTCGCAATAGGCGAAATGTATTTCCTAAACAATATTGCTGTTCCTaGAGGATGAGCATCTGTTAT +
Preference number: 4 (lower is better)
Translates to: LGFRVNGKSRNRRNVFPKQYCCS*RMSICY
Trigger: ATAACAGATGCTCATCCTCCAGGAACAGCAATATTG...TTTAGGAAATACATTTCGCCTATTGCGACTTTTTCCATTTACCCTGAAGCCTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp CTAGGCTTCAGGGTAAATGGAAAAAGTCGCAATAGGCGAAATGTATTTCCTAAAACTTGGATTTTTCCTTaGTCTGGGCACTTTTTCAGA +
Preference number: 4 (lower is better)
Translates to: LGFRVNGKSRNRRNVFPKTWIFP*SGHFFR
Trigger: TCTGAAAAAGTGCCCAGACCAAGGAAAAATCCAAGT...TTTAGGAAATACATTTCGCCTATTGCGACTTTTTCCATTTACCCTGAAGCCTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp TTTCCTGCATTCAGAGGAGGAGCAATGACTCTGAAAAGTTTCTCCATTGGACTAAGAAATTCAAAAACCTaGTTTTTAACCAAGGGAACC +
Preference number: 4 (lower is better)
Translates to: FPAFRGGAMTLKSFSIGLRNSKT*FLTKGT
Trigger: GGTTCCCTTGGTTAAAAACCAGGTTTTTGAATTTCT...TAGTCCAATGGAGAAACTTTTCAGAGTCATTGCTCCTCCTCTGAATGCAGGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000458721.5
CDS-3UTR CCA 90 bp CTAGGCTTCAGGGTAAATGGAAAAAGTCGCAATAGGCGAAATGTATTTCCTAAAGCCTCACGTTGCTGCTaGTTCAAATTATGTGAATTT +
Preference number: 4 (lower is better)
Translates to: LGFRVNGKSRNRRNVFPKASRCC*FKLCEF
Trigger: AAATTCACATAATTTGAACCAGCAGCAACGTGAGGC...TTTAGGAAATACATTTCGCCTATTGCGACTTTTTCCATTTACCCTGAAGCCTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp CCACCAATTTATCACTTAAAATATATGGCTCAAGGCACTCCAAAAATACTCCTTTCATTACTTGGGGTGTaGTTCCCACCAATTTATCAC +
Preference number: 4 (lower is better)
Translates to: PPIYHLKYMAQGTPKILLSLLGV*FPPIYH
Trigger: GTGATAAATTGGTGGGAATCACACCCCAAGTAATGA...AAGGAGTATTTTTGGAGTGCCTTGAGCCATATATTTTAAGTGATAAATTGGTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000421069.5
ENST00000458721.5
CDS-3UTR TCA 90 bp CCCACCAATTTATCACTTAAAATATATGGCTCAAGGCACTCCAAAAATACTCCTTATCCATATGTACAATaGGCGCTTCCACATTTTCCA +
Preference number: 4 (lower is better)
Translates to: PTNLSLKIYGSRHSKNTPYPYVQ*ALPHFP
Trigger: TGGAAAATGTGGAAGCGCTCATTGTACATATGGATA...AGGAGTATTTTTGGAGTGCCTTGAGCCATATATTTTAAGTGATAAATTGGTGGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000421069.5
ENST00000458721.5
CDS-3UTR TCA 90 bp AGGCTGGTGATATCCATATGTACAATGAGCGCTTCCACATTTTCCATTAATTTTTATCCATATGTACAATaGGCGCTTCCACATTTTCCA +
Preference number: 4 (lower is better)
Translates to: RLVISICTMSASTFSINFYPYVQ*ALPHFP
Trigger: TGGAAAATGTGGAAGCGCTCATTGTACATATGGATA...AAAATTAATGGAAAATGTGGAAGCGCTCATTGTACATATGGATATCACCAGCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000421069.5
ENST00000458721.5
CDS-3UTR TCA 90 bp CCCACCAATTTATCACTTAAAATATATGGCTCAAGGCACTCCAAAAATACTCCTGATTTTCCCAACACATaGGAACTACCTGCTGAATAT +
Preference number: 4 (lower is better)
Translates to: PTNLSLKIYGSRHSKNTPDFPNT*ELPAEY
Trigger: ATATTCAGCAGGTAGTTCTCATGTGTTGGGAAAATC...AGGAGTATTTTTGGAGTGCCTTGAGCCATATATTTTAAGTGATAAATTGGTGGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000421069.5
ENST00000458721.5
CDS-3UTR TCA 90 bp ATGTATTTCCTAAAAAGCTGGACAGAGGTATGTGACATTCCTTTGCTTAACAAGATTAGGAAGGCACCATaGATATCTCCTTTCTTTTCC +
Preference number: 4 (lower is better)
Translates to: MYFLKSWTEVCDIPLLNKIRKAP*ISPFFS
Trigger: GGAAAAGAAAGGAGATATTCATGGTGCCTTCCTAAT...CTTGTTAAGCAAAGGAATGTCACATACCTCTGTCCAGCTTTTTAGGAAATACAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR TCA 90 bp CCTGCTAGACAACAGCTAATATATACAAGGAGCTTATTGCCCATAACAACTTGTAGGTATGGTCTTTCATaGCAAGTTCCACAAAAACAT +
Preference number: 4 (lower is better)
Translates to: PARQQLIYTRSLLPITTCRYGLS*QVPQKH
Trigger: ATGTTTTTGTGGAACTTGTCATGAAAGACCATACCT...ACAAGTTGTTATGGGCAATAAGCTCCTTGTATATATTAGCTGTTGTCTAGCAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458721.5
CDS-3UTR CCA 90 bp AGGCTGGTGATATCCATATGTACAATGAGCGCTTCCACATTTTCCATTAATTTTACTTGGATTTTTCCTTaGTCTGGGCACTTTTTCAGA +
Preference number: 4 (lower is better)
Translates to: RLVISICTMSASTFSINFTWIFP*SGHFFR
Trigger: TCTGAAAAAGTGCCCAGACCAAGGAAAAATCCAAGT...AAAATTAATGGAAAATGTGGAAGCGCTCATTGTACATATGGATATCACCAGCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000421069.5
ENST00000458721.5
CDS-3UTR CCA 90 bp GCTGGACAGAGGTATGTGACATTCCTTTGCTTAACAAGCAAAACAAAATCAATGTTACACAATGACCAATaGAGATCTTGGTTTAGAAGG +
Preference number: 4 (lower is better)
Translates to: AGQRYVTFLCLTSKTKSMLHNDQ*RSWFRR
Trigger: CCTTCTAAACCAAGATCTCCATTGGTCATTGTGTAA...CATTGATTTTGTTTTGCTTGTTAAGCAAAGGAATGTCACATACCTCTGTCCAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp GCTGGACAGAGGTATGTGACATTCCTTTGCTTAACAAGCAAAACAAAATCAATGGCAAATTGCAAGAGTTaGATCATCTGTAAACTTGAT +
Preference number: 4 (lower is better)
Translates to: AGQRYVTFLCLTSKTKSMANCKS*IICKLD
Trigger: ATCAAGTTTACAGATGATCCAACTCTTGCAATTTGC...CATTGATTTTGTTTTGCTTGTTAAGCAAAGGAATGTCACATACCTCTGTCCAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp ATGTATTTCCTAAAAAGCTGGACAGAGGTATGTGACATTCCTTTGCTTAACAAGTTACACAATGACCAATaGAGATCTTGGTTTAGAAGG +
Preference number: 4 (lower is better)
Translates to: MYFLKSWTEVCDIPLLNKLHNDQ*RSWFRR
Trigger: CCTTCTAAACCAAGATCTCCATTGGTCATTGTGTAA...CTTGTTAAGCAAAGGAATGTCACATACCTCTGTCCAGCTTTTTAGGAAATACAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CCA 90 bp TCTAGGCTGGTGATATCCATATGTACAATGAGCGCTTCCACATTTTCCATTAATATTTATTCACAGGTATaGTCTTTCATGACAAGTTCC +
Preference number: 4 (lower is better)
Translates to: SRLVISICTMSASTFSINIYSQV*SFMTSS
Trigger: GGAACTTGTCATGAAAGACCATACCTGTGAATAAAT...ATTAATGGAAAATGTGGAAGCGCTCATTGTACATATGGATATCACCAGCCTAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458721.5
CDS-3UTR GCA 90 bp CCACCAATTTATCACTTAAAATATATGGCTCAAGGCACTCCAAAAATACTCCTTAGGTTTATTCCAGGATaGAAGACTGGTTCAATATTC +
Preference number: 4 (lower is better)
Translates to: PPIYHLKYMAQGTPKILLRFIPG*KTGSIF
Trigger: GAATATTGAACCAGTCTTGCATCCTGGAATAAACCT...AAGGAGTATTTTTGGAGTGCCTTGAGCCATATATTTTAAGTGATAAATTGGTGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421069.5
CDS-3UTR CCA 90 bp CCACCAATTTATCACTTAAAATATATGGCTCAAGGCACTCCAAAAATACTCCTTTCCAGGATGCAAGACTaGTTCAATATTCAAAAACCA +
Preference number: 4 (lower is better)
Translates to: PPIYHLKYMAQGTPKILLSRMQD*FNIQKP
Trigger: TGGTTTTTGAATATTGAACCAGTCTTGCATCCTGGA...AAGGAGTATTTTTGGAGTGCCTTGAGCCATATATTTTAAGTGATAAATTGGTGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000421069.5
CDS-3UTR CAA 90 bp CACCAGAGGCGGGGCCTCTCCCCAGCTGCCTCGGGATCATCTCTGGTTCTCCTGAGGTGTTGTCAGGCTTaGCAAGCTGCCGAGCAAGGA +
Preference number: 5 (lower is better)
Translates to: HQRRGLSPAASGSSLVLLRCCQA*QAAEQG
Trigger: TCCTTGCTCGGCAGCTTGCAAAGCCTGACAACACCT...CAGGAGAACCAGAGATGATCCCGAGGCAGCTGGGGAGAGGCCCCGCCTCTGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp GGCGGGGCCTCTCCCCAGCTGCCTCGGGATCATCTCTGGTTCTCCTGGGCCAGGCGCTGTCGTTGCAAATaGCAAGAGTTGGATCATCTG +
Preference number: 5 (lower is better)
Translates to: GGASPQLPRDHLWFSWARRCRCK*QELDHL
Trigger: CAGATGATCCAACTCTTGCAATTTGCAACGACAGCG...CCTGGCCCAGGAGAACCAGAGATGATCCCGAGGCAGCTGGGGAGAGGCCCCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp CCAAGCCCACCAGAGGCGGGGCCTCTCCCCAGCTGCCTCGGGATCATCTCTGGTCAGCAGACTTCACCCTaGGAACCACTGAACAGACAT +
Preference number: 5 (lower is better)
Translates to: PSPPEAGPLPSCLGIISGQQTSP*EPLNRH
Trigger: ATGTCTGTTCAGTGGTTCCAAGGGTGAAGTCTGCTG...ACCAGAGATGATCCCGAGGCAGCTGGGGAGAGGCCCCGCCTCTGGTGGGCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp GGCGGGGCCTCTCCCCAGCTGCCTCGGGATCATCTCTGGTTCTCCTGGGCCAGGCATGAATACCTTCCCTaGGGTCAAGAAGACTCCTCA +
Preference number: 5 (lower is better)
Translates to: GGASPQLPRDHLWFSWARHEYLP*GQEDSS
Trigger: TGAGGAGTCTTCTTGACCCAAGGGAAGGTATTCATG...CCTGGCCCAGGAGAACCAGAGATGATCCCGAGGCAGCTGGGGAGAGGCCCCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp GGCGGGGCCTCTCCCCAGCTGCCTCGGGATCATCTCTGGTTCTCCTGGGCCAGGAGTCTTGAGCAATCATaGTTGATACTGAGGGCAGAG +
Preference number: 5 (lower is better)
Translates to: GGASPQLPRDHLWFSWARSLEQS*LILRAE
Trigger: CTCTGCCCTCAGTATCAACAATGATTGCTCAAGACT...CCTGGCCCAGGAGAACCAGAGATGATCCCGAGGCAGCTGGGGAGAGGCCCCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp CCAAGCCCACCAGAGGCGGGGCCTCTCCCCAGCTGCCTCGGGATCATCTCTGGTTCGACTCTCTTCAAATaGAACTATGCCTCCAGCCTG +
Preference number: 5 (lower is better)
Translates to: PSPPEAGPLPSCLGIISGSTLFK*NYASSL
Trigger: CAGGCTGGAGGCATAGTTCAATTTGAAGAGAGTCGA...ACCAGAGATGATCCCGAGGCAGCTGGGGAGAGGCCCCGCCTCTGGTGGGCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp CCACCAGAGGCGGGGCCTCTCCCCAGCTGCCTCGGGATCATCTCTGGTTCTCCTTTCTGGAAGATGCTGTaGAAAGCAGGAGCACTCTGC +
Preference number: 5 (lower is better)
Translates to: PPEAGPLPSCLGIISGSPFWKML*KAGALC
Trigger: GCAGAGTGCTCCTGCTTTCAACAGCATCTTCCAGAA...AGGAGAACCAGAGATGATCCCGAGGCAGCTGGGGAGAGGCCCCGCCTCTGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp CCACCAGAGGCGGGGCCTCTCCCCAGCTGCCTCGGGATCATCTCTGGTTCTCCTCGCTGTCGTTGCAAATaGCAAGAGTTGGATCATCTG +
Preference number: 5 (lower is better)
Translates to: PPEAGPLPSCLGIISGSPRCRCK*QELDHL
Trigger: CAGATGATCCAACTCTTGCAATTTGCAACGACAGCG...AGGAGAACCAGAGATGATCCCGAGGCAGCTGGGGAGAGGCCCCGCCTCTGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp CCCCAGCTGCCTCGGGATCATCTCTGGTTCTCCTGGGCCAGGCTCCATGGAGTCCAGCAGACTTCACCCTaGGAACCACTGAACAGACAT +
Preference number: 5 (lower is better)
Translates to: PQLPRDHLWFSWARLHGVQQTSP*EPLNRH
Trigger: ATGTCTGTTCAGTGGTTCCAAGGGTGAAGTCTGCTG...GACTCCATGGAGCCTGGCCCAGGAGAACCAGAGATGATCCCGAGGCAGCTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp CCAAGCCCACCAGAGGCGGGGCCTCTCCCCAGCTGCCTCGGGATCATCTCTGGTCACTTGGATTTTTCCTaGGTCTGGGCACTTTTTCAG +
Preference number: 5 (lower is better)
Translates to: PSPPEAGPLPSCLGIISGHLDFS*VWALFQ
Trigger: CTGAAAAAGTGCCCAGACCAAGGAAAAATCCAAGTG...ACCAGAGATGATCCCGAGGCAGCTGGGGAGAGGCCCCGCCTCTGGTGGGCTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp CACCAGAGGCGGGGCCTCTCCCCAGCTGCCTCGGGATCATCTCTGGTTCTCCTGTCGACTCTCTTCAAATaGAACTATGCCTCCAGCCTG +
Preference number: 5 (lower is better)
Translates to: HQRRGLSPAASGSSLVLLSTLFK*NYASSL
Trigger: CAGGCTGGAGGCATAGTTCAATTTGAAGAGAGTCGA...CAGGAGAACCAGAGATGATCCCGAGGCAGCTGGGGAGAGGCCCCGCCTCTGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp CCACCAGAGGCGGGGCCTCTCCCCAGCTGCCTCGGGATCATCTCTGGTTCTCCTCCAAAGTGCCTCACGTaGCTGCTGGTTCAAATTATG +
Preference number: 5 (lower is better)
Translates to: PPEAGPLPSCLGIISGSPPKCLT*LLVQIM
Trigger: CATAATTTGAACCAGCAGCAACGTGAGGCACTTTGG...AGGAGAACCAGAGATGATCCCGAGGCAGCTGGGGAGAGGCCCCGCCTCTGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp CCAAGCCCACCAGAGGCGGGGCCTCTCCCCAGCTGCCTCGGGATCATCTCTGGTTGTAGCATGTCCATCTaGTTTGGCCCTCAAATTCCA +
Preference number: 5 (lower is better)
Translates to: PSPPEAGPLPSCLGIISGCSMSI*FGPQIP
Trigger: TGGAATTTGAGGGCCAAACAAGATGGACATGCTACA...ACCAGAGATGATCCCGAGGCAGCTGGGGAGAGGCCCCGCCTCTGGTGGGCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp AGGCGGGGCCTCTCCCCAGCTGCCTCGGGATCATCTCTGGTTCTCCTGGGCCAGATCAAATGCTTGGATTaGCTGTGGATCCAGAACAGG +
Preference number: 5 (lower is better)
Translates to: RRGLSPAASGSSLVLLGQIKCLD*LWIQNR
Trigger: CCTGTTCTGGATCCACAGCAAATCCAAGCATTTGAT...CTGGCCCAGGAGAACCAGAGATGATCCCGAGGCAGCTGGGGAGAGGCCCCGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp CCCCAGCTGCCTCGGGATCATCTCTGGTTCTCCTGGGCCAGGCTCCATGGAGTCGCACAGAAGCCCAATTaGGAACCTCTTCTCAGAAGC +
Preference number: 5 (lower is better)
Translates to: PQLPRDHLWFSWARLHGVAQKPN*EPLLRS
Trigger: GCTTCTGAGAAGAGGTTCCAAATTGGGCTTCTGTGC...GACTCCATGGAGCCTGGCCCAGGAGAACCAGAGATGATCCCGAGGCAGCTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp AGGCGGGGCCTCTCCCCAGCTGCCTCGGGATCATCTCTGGTTCTCCTGGGCCAGCTTGAGCAATCATTGTaGATACTGAGGGCAGAGATA +
Preference number: 5 (lower is better)
Translates to: RRGLSPAASGSSLVLLGQLEQSL*ILRAEI
Trigger: TATCTCTGCCCTCAGTATCAACAATGATTGCTCAAG...CTGGCCCAGGAGAACCAGAGATGATCCCGAGGCAGCTGGGGAGAGGCCCCGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp AGGCGGGGCCTCTCCCCAGCTGCCTCGGGATCATCTCTGGTTCTCCTGGGCCAGGGGATTCACGTAATTTaGTACTGCTACAAAGTGCCA +
Preference number: 5 (lower is better)
Translates to: RRGLSPAASGSSLVLLGQGIHVI*YCYKVP
Trigger: TGGCACTTTGTAGCAGTACAAAATTACGTGAATCCC...CTGGCCCAGGAGAACCAGAGATGATCCCGAGGCAGCTGGGGAGAGGCCCCGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp CCAAGCCCACCAGAGGCGGGGCCTCTCCCCAGCTGCCTCGGGATCATCTCTGGTCCTCAATATGATCCATaGCTTTCTGCCATACAGACT +
Preference number: 5 (lower is better)
Translates to: PSPPEAGPLPSCLGIISGPQYDP*LSAIQT
Trigger: AGTCTGTATGGCAGAAAGCAATGGATCATATTGAGG...ACCAGAGATGATCCCGAGGCAGCTGGGGAGAGGCCCCGCCTCTGGTGGGCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp GAACCTCTTCTCAGAAGCGTGGGAGGTGGTGGAGGCCAAGCCCACCAGAGGCGGGCATGTCCATCTTGTTaGGCCCTCAAATTCCACAGT +
Preference number: 5 (lower is better)
Translates to: EPLLRSVGGGGGQAHQRRACPSC*ALKFHS
Trigger: ACTGTGGAATTTGAGGGCCAAACAAGATGGACATGC...CCGCCTCTGGTGGGCTTGGCCTCCACCACCTCCCACGCTTCTGAGAAGAGGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp TGGAACCTCTTCTCAGAAGCGTGGGAGGTGGTGGAGGCCAAGCCCACCAGAGGCGCACAGAAGCCCAATTaGGAACCTCTTCTCAGAAGC +
Preference number: 5 (lower is better)
Translates to: WNLFSEAWEVVEAKPTRGAQKPN*EPLLRS
Trigger: GCTTCTGAGAAGAGGTTCCAAATTGGGCTTCTGTGC...GCCTCTGGTGGGCTTGGCCTCCACCACCTCCCACGCTTCTGAGAAGAGGTTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp CCCCAGCTGCCTCGGGATCATCTCTGGTTCTCCTGGGCCAGGCTCCATGGAGTCAGTCTTGAGCAATCATaGTTGATACTGAGGGCAGAG +
Preference number: 5 (lower is better)
Translates to: PQLPRDHLWFSWARLHGVSLEQS*LILRAE
Trigger: CTCTGCCCTCAGTATCAACAATGATTGCTCAAGACT...GACTCCATGGAGCCTGGCCCAGGAGAACCAGAGATGATCCCGAGGCAGCTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp CCCCAGCTGCCTCGGGATCATCTCTGGTTCTCCTGGGCCAGGCTCCATGGAGTCCAAGTCTTTCATTACTaGGGGTGTGATTCCCACCAA +
Preference number: 5 (lower is better)
Translates to: PQLPRDHLWFSWARLHGVQVFHY*GCDSHQ
Trigger: TTGGTGGGAATCACACCCCAAGTAATGAAAGACTTG...GACTCCATGGAGCCTGGCCCAGGAGAACCAGAGATGATCCCGAGGCAGCTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000625842.3
CDS-3UTR CAA 90 bp CACCAGAGGCGGGGCCTCTCCCCAGCTGCCTCGGGATCATCTCTGGTTCTCCTGATCCACAATTCGCTGTaGATATTCCACAGCTTGCTT +
Preference number: 5 (lower is better)
Translates to: HQRRGLSPAASGSSLVLLIHNSL*IFHSLL
Trigger: AAGCAAGCTGTGGAATATCAACAGCGAATTGTGGAT...CAGGAGAACCAGAGATGATCCCGAGGCAGCTGGGGAGAGGCCCCGCCTCTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp GCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTCAGAAGCGTGGGAGGTGGAGGTGTTGTCAGGCTTaGCAAGCTGCCGAGCAAGGA +
Preference number: 5 (lower is better)
Translates to: ALGTEAQFGTSSQKRGRWRCCQA*QAAEQG
Trigger: TCCTTGCTCGGCAGCTTGCAAAGCCTGACAACACCT...CCACCTCCCACGCTTCTGAGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp CACCAGAGGCGGGGCCTCTCCCCAGCTGCCTCGGGATCATCTCTGGTTCTCCTGCCTCAATATGATCCATaGCTTTCTGCCATACAGACT +
Preference number: 5 (lower is better)
Translates to: HQRRGLSPAASGSSLVLLPQYDP*LSAIQT
Trigger: AGTCTGTATGGCAGAAAGCAATGGATCATATTGAGG...CAGGAGAACCAGAGATGATCCCGAGGCAGCTGGGGAGAGGCCCCGCCTCTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp CCCAATTTGGAACCTCTTCTCAGAAGCGTGGGAGGTGGTGGAGGCCAAGCCCACTCTGAGGGGCCATCATaGCCTCCAATAACGGAAACC +
Preference number: 5 (lower is better)
Translates to: PNLEPLLRSVGGGGGQAHSEGPS*PPITET
Trigger: GGTTTCCGTTATTGGAGGCAATGATGGCCCCTCAGA...GTGGGCTTGGCCTCCACCACCTCCCACGCTTCTGAGAAGAGGTTCCAAATTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp AGGCGGGGCCTCTCCCCAGCTGCCTCGGGATCATCTCTGGTTCTCCTGGGCCAGTGTTTCCAGCAGGGTTaGTTCATAGTTAAAGGTATC +
Preference number: 5 (lower is better)
Translates to: RRGLSPAASGSSLVLLGQCFQQG*FIVKGI
Trigger: GATACCTTTAACTATGAACAAACCCTGCTGGAAACA...CTGGCCCAGGAGAACCAGAGATGATCCCGAGGCAGCTGGGGAGAGGCCCCGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp CCCCAGCTGCCTCGGGATCATCTCTGGTTCTCCTGGGCCAGGCTCCATGGAGTCATCAAATGCTTGGATTaGCTGTGGATCCAGAACAGG +
Preference number: 5 (lower is better)
Translates to: PQLPRDHLWFSWARLHGVIKCLD*LWIQNR
Trigger: CCTGTTCTGGATCCACAGCAAATCCAAGCATTTGAT...GACTCCATGGAGCCTGGCCCAGGAGAACCAGAGATGATCCCGAGGCAGCTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp GAACCTCTTCTCAGAAGCGTGGGAGGTGGTGGAGGCCAAGCCCACCAGAGGCGGATCAAATGCTTGGATTaGCTGTGGATCCAGAACAGG +
Preference number: 5 (lower is better)
Translates to: EPLLRSVGGGGGQAHQRRIKCLD*LWIQNR
Trigger: CCTGTTCTGGATCCACAGCAAATCCAAGCATTTGAT...CCGCCTCTGGTGGGCTTGGCCTCCACCACCTCCCACGCTTCTGAGAAGAGGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp CCACCAGAGGCGGGGCCTCTCCCCAGCTGCCTCGGGATCATCTCTGGTTCTCCTTCAATCAGATCATTTTaGAACTCCAGTTCCTTGTCC +
Preference number: 5 (lower is better)
Translates to: PPEAGPLPSCLGIISGSPSIRSF*NSSSLS
Trigger: GGACAAGGAACTGGAGTTCAAAAATGATCTGATTGA...AGGAGAACCAGAGATGATCCCGAGGCAGCTGGGGAGAGGCCCCGCCTCTGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp GAACCTCTTCTCAGAAGCGTGGGAGGTGGTGGAGGCCAAGCCCACCAGAGGCGGCTTGAGCAATCATTGTaGATACTGAGGGCAGAGATA +
Preference number: 5 (lower is better)
Translates to: EPLLRSVGGGGGQAHQRRLEQSL*ILRAEI
Trigger: TATCTCTGCCCTCAGTATCAACAATGATTGCTCAAG...CCGCCTCTGGTGGGCTTGGCCTCCACCACCTCCCACGCTTCTGAGAAGAGGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp ACTGGGAGTCTACACTGGGAATGGTGCTGTGGACGCTCTGGGCACAGAAGCCCACAGCAGACTTCACCCTaGGAACCACTGAACAGACAT +
Preference number: 5 (lower is better)
Translates to: TGSLHWEWCCGRSGHRSPQQTSP*EPLNRH
Trigger: ATGTCTGTTCAGTGGTTCCAAGGGTGAAGTCTGCTG...TGGGCTTCTGTGCCCAGAGCGTCCACAGCACCATTCCCAGTGTAGACTCCCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp CACCAGAGGCGGGGCCTCTCCCCAGCTGCCTCGGGATCATCTCTGGTTCTCCTGTTCTGTAAGACAATCTaGTTTCAGGAGATGATCCAC +
Preference number: 5 (lower is better)
Translates to: HQRRGLSPAASGSSLVLLFCKTI*FQEMIH
Trigger: GTGGATCATCTCCTGAAACAAGATTGTCTTACAGAA...CAGGAGAACCAGAGATGATCCCGAGGCAGCTGGGGAGAGGCCCCGCCTCTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp TGGAACCTCTTCTCAGAAGCGTGGGAGGTGGTGGAGGCCAAGCCCACCAGAGGCCAGAGTCTCTATAACTaGGGTTGGGTTGAACTGACA +
Preference number: 5 (lower is better)
Translates to: WNLFSEAWEVVEAKPTRGQSLYN*GWVELT
Trigger: TGTCAGTTCAACCCAACCCAAGTTATAGAGACTCTG...GCCTCTGGTGGGCTTGGCCTCCACCACCTCCCACGCTTCTGAGAAGAGGTTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp CCACCAGAGGCGGGGCCTCTCCCCAGCTGCCTCGGGATCATCTCTGGTTCTCCTTATAGAGCAGTAATCTaGTTTGGGATTCAGTCCTCT +
Preference number: 5 (lower is better)
Translates to: PPEAGPLPSCLGIISGSPYRAVI*FGIQSS
Trigger: AGAGGACTGAATCCCAAACAAGATTACTGCTCTATA...AGGAGAACCAGAGATGATCCCGAGGCAGCTGGGGAGAGGCCCCGCCTCTGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp TGGAACCTCTTCTCAGAAGCGTGGGAGGTGGTGGAGGCCAAGCCCACCAGAGGCACTCTGGAATGCCATTaGTGTGAGTTCCACCTACTT +
Preference number: 5 (lower is better)
Translates to: WNLFSEAWEVVEAKPTRGTLECH*CEFHLL
Trigger: AAGTAGGTGGAACTCACACAAATGGCATTCCAGAGT...GCCTCTGGTGGGCTTGGCCTCCACCACCTCCCACGCTTCTGAGAAGAGGTTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp AATGGTGCTGTGGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTCAGTCTTCTTCGCTCGTCTaGGCACAGAGGCTCTGTTCC +
Preference number: 5 (lower is better)
Translates to: NGAVDALGTEAQFGTSSQSSSLV*AQRLCS
Trigger: GGAACAGAGCCTCTGTGCCAAGACGAGCGAAGAAGA...CTGAGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp GAACCTCTTCTCAGAAGCGTGGGAGGTGGTGGAGGCCAAGCCCACCAGAGGCGGTCAATCAGATCATTTTaGAACTCCAGTTCCTTGTCC +
Preference number: 5 (lower is better)
Translates to: EPLLRSVGGGGGQAHQRRSIRSF*NSSSLS
Trigger: GGACAAGGAACTGGAGTTCAAAAATGATCTGATTGA...CCGCCTCTGGTGGGCTTGGCCTCCACCACCTCCCACGCTTCTGAGAAGAGGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp CAATGTGGAGAAGACTGGGAGTCTACACTGGGAATGGTGCTGTGGACGCTCTGGGAGCCTCCGCTGTCGTaGCAAATTGCAAGAGTTGGA +
Preference number: 5 (lower is better)
Translates to: QCGEDWESTLGMVLWTLWEPPLS*QIARVG
Trigger: TCCAACTCTTGCAATTTGCAACGACAGCGGAGGCTC...CCAGAGCGTCCACAGCACCATTCCCAGTGTAGACTCCCAGTCTTCTCCACATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp GGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTCAGAAGCGTGGGAGCAGCAGACTTCACCCTaGGAACCACTGAACAGACAT +
Preference number: 5 (lower is better)
Translates to: GRSGHRSPIWNLFSEAWEQQTSP*EPLNRH
Trigger: ATGTCTGTTCAGTGGTTCCAAGGGTGAAGTCTGCTG...CTCCCACGCTTCTGAGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp GGAGAAGACTGGGAGTCTACACTGGGAATGGTGCTGTGGACGCTCTGGGCACAGATGCTGCTCCATCACTaGGATTTTTCCTTGGTCTGG +
Preference number: 5 (lower is better)
Translates to: GEDWESTLGMVLWTLWAQMLLHH*DFSLVW
Trigger: CCAGACCAAGGAAAAATCCAAGTGATGGAGCAGCAT...CTGTGCCCAGAGCGTCCACAGCACCATTCCCAGTGTAGACTCCCAGTCTTCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp CAGTGTCTGCTCTCTCCAAGGCATGCTTCAGTTATACTGCAGCCTGGCCAACCAAGGTGTTGTCAGGCTTaGCAAGCTGCCGAGCAAGGA +
Preference number: 5 (lower is better)
Translates to: QCLLSPRHASVILQPGQPRCCQA*QAAEQG
Trigger: TCCTTGCTCGGCAGCTTGCAAAGCCTGACAACACCT...TGGTTGGCCAGGCTGCAGTATAACTGAAGCATGCCTTGGAGAGAGCAGACACTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp GTGGAGAAGACTGGGAGTCTACACTGGGAATGGTGCTGTGGACGCTCTGGGCACCATGAATACCTTCCCTaGGGTCAAGAAGACTCCTCA +
Preference number: 5 (lower is better)
Translates to: VEKTGSLHWEWCCGRSGHHEYLP*GQEDSS
Trigger: TGAGGAGTCTTCTTGACCCAAGGGAAGGTATTCATG...GTGCCCAGAGCGTCCACAGCACCATTCCCAGTGTAGACTCCCAGTCTTCTCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp CCAGCAGCTGGAGGAGACGGAGTATGGCAGACTCTGGAATGCCATTTGTGTGAGTCTGAGGGGCCATCATaGCCTCCAATAACGGAAACC +
Preference number: 5 (lower is better)
Translates to: PAAGGDGVWQTLECHLCESEGPS*PPITET
Trigger: GGTTTCCGTTATTGGAGGCAATGATGGCCCCTCAGA...CTCACACAAATGGCATTCCAGAGTCTGCCATACTCCGTCTCCTCCAGCTGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp GAACCTCTTCTCAGAAGCGTGGGAGGTGGTGGAGGCCAAGCCCACCAGAGGCGGTGTTTCCAGCAGGGTTaGTTCATAGTTAAAGGTATC +
Preference number: 5 (lower is better)
Translates to: EPLLRSVGGGGGQAHQRRCFQQG*FIVKGI
Trigger: GATACCTTTAACTATGAACAAACCCTGCTGGAAACA...CCGCCTCTGGTGGGCTTGGCCTCCACCACCTCCCACGCTTCTGAGAAGAGGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp GAACCTCTTCTCAGAAGCGTGGGAGGTGGTGGAGGCCAAGCCCACCAGAGGCGGATTTCTTGGCGTCTCTaGTACTGCTGCAAACATATA +
Preference number: 5 (lower is better)
Translates to: EPLLRSVGGGGGQAHQRRISWRL*YCCKHI
Trigger: TATATGTTTGCAGCAGTACAAGAGACGCCAAGAAAT...CCGCCTCTGGTGGGCTTGGCCTCCACCACCTCCCACGCTTCTGAGAAGAGGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp ACTGGGAGTCTACACTGGGAATGGTGCTGTGGACGCTCTGGGCACAGAAGCCCATTCATCAGCCATTTCTaGGCGTCTCTTGTACTGCTG +
Preference number: 5 (lower is better)
Translates to: TGSLHWEWCCGRSGHRSPFISHF*ASLVLL
Trigger: CAGCAGTACAAGAGACGCCAAGAAATGGCTGATGAA...TGGGCTTCTGTGCCCAGAGCGTCCACAGCACCATTCCCAGTGTAGACTCCCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp CCCCAGCTGCCTCGGGATCATCTCTGGTTCTCCTGGGCCAGGCTCCATGGAGTCAACACGGAGCATTTATaGTTAGAAAGGGCAAGTCTT +
Preference number: 5 (lower is better)
Translates to: PQLPRDHLWFSWARLHGVNTEHL*LERASL
Trigger: AAGACTTGCCCTTTCTAACAATAAATGCTCCGTGTT...GACTCCATGGAGCCTGGCCCAGGAGAACCAGAGATGATCCCGAGGCAGCTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS CCA 90 bp TCTCCTGGGCCAGGCTCCATGGAGTCATCAATCCTCAGTCACAGGTaGAGGAATGAGCTGCAGCTGGAAGTTCTCATTCTGGAAGATGCT +
Preference number: 5 (lower is better)
Translates to: SPGPGSMESSILSHR*RNELQLEVLILEDA
Trigger: AGCATCTTCCAGAATGAGAACTTCCAGCTGCAGCTCATTCCTCCACCTGTGACTGAGGATTGATGACTCCATGGAGCCTGGCCCAGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000492449.5
ENST00000625842.3
CDS-3UTR CAA 90 bp ACTGGGAGTCTACACTGGGAATGGTGCTGTGGACGCTCTGGGCACAGAAGCCCAGTATGCTTTCCAGTGTaGGAGGAGTATCAACTTGAG +
Preference number: 5 (lower is better)
Translates to: TGSLHWEWCCGRSGHRSPVCFPV*EEYQLE
Trigger: CTCAAGTTGATACTCCTCCAACACTGGAAAGCATAC...TGGGCTTCTGTGCCCAGAGCGTCCACAGCACCATTCCCAGTGTAGACTCCCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp CCCAATTTGGAACCTCTTCTCAGAAGCGTGGGAGGTGGTGGAGGCCAAGCCCACCACCACTATCTGAGCTaGCCACAGATGAAGTATCAT +
Preference number: 5 (lower is better)
Translates to: PNLEPLLRSVGGGGGQAHHHYLS*PQMKYH
Trigger: ATGATACTTCATCTGTGGCAAGCTCAGATAGTGGTG...GTGGGCTTGGCCTCCACCACCTCCCACGCTTCTGAGAAGAGGTTCCAAATTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp AATGGTGCTGTGGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTCAGGAGCCTCCGCTGTCGTaGCAAATTGCAAGAGTTGGA +
Preference number: 5 (lower is better)
Translates to: NGAVDALGTEAQFGTSSQEPPLS*QIARVG
Trigger: TCCAACTCTTGCAATTTGCAACGACAGCGGAGGCTC...CTGAGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp GGAGAAGACTGGGAGTCTACACTGGGAATGGTGCTGTGGACGCTCTGGGCACAGTGTCTCCAATTCCTCTaGTGTTTGCCGATCAATCAC +
Preference number: 5 (lower is better)
Translates to: GEDWESTLGMVLWTLWAQCLQFL*CLPINH
Trigger: GTGATTGATCGGCAAACACAAGAGGAATTGGAGACA...CTGTGCCCAGAGCGTCCACAGCACCATTCCCAGTGTAGACTCCCAGTCTTCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp ACTGGGAGTCTACACTGGGAATGGTGCTGTGGACGCTCTGGGCACAGAAGCCCACAAGTCTTTCATTACTaGGGGTGTGATTCCCACCAA +
Preference number: 5 (lower is better)
Translates to: TGSLHWEWCCGRSGHRSPQVFHY*GCDSHQ
Trigger: TTGGTGGGAATCACACCCCAAGTAATGAAAGACTTG...TGGGCTTCTGTGCCCAGAGCGTCCACAGCACCATTCCCAGTGTAGACTCCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000625842.3
CDS-3UTR CAA 90 bp CCCCAGCTGCCTCGGGATCATCTCTGGTTCTCCTGGGCCAGGCTCCATGGAGTCTTTGGTATTTTCACCTaGATGTGTTACCTCTTGAAG +
Preference number: 5 (lower is better)
Translates to: PQLPRDHLWFSWARLHGVFGIFT*MCYLLK
Trigger: CTTCAAGAGGTAACACATCAAGGTGAAAATACCAAA...GACTCCATGGAGCCTGGCCCAGGAGAACCAGAGATGATCCCGAGGCAGCTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp CTCTCTCCAAGGCATGCTTCAGTTATACTGCAGCCTGGCCAACCACTGTTCCCTTCTGAGGGGCCATCATaGCCTCCAATAACGGAAACC +
Preference number: 5 (lower is better)
Translates to: LSPRHASVILQPGQPLFPSEGPS*PPITET
Trigger: GGTTTCCGTTATTGGAGGCAATGATGGCCCCTCAGA...AGGGAACAGTGGTTGGCCAGGCTGCAGTATAACTGAAGCATGCCTTGGAGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp GTGGAGAAGACTGGGAGTCTACACTGGGAATGGTGCTGTGGACGCTCTGGGCACTTAGAAGGCTGGTTGTaGTTTCCAGCAGGGTTTGTT +
Preference number: 5 (lower is better)
Translates to: VEKTGSLHWEWCCGRSGHLEGWL*FPAGFV
Trigger: AACAAACCCTGCTGGAAACAACAACCAGCCTTCTAA...GTGCCCAGAGCGTCCACAGCACCATTCCCAGTGTAGACTCCCAGTCTTCTCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp TGGAACCTCTTCTCAGAAGCGTGGGAGGTGGTGGAGGCCAAGCCCACCAGAGGCTATAGAGCAGTAATCTaGTTTGGGATTCAGTCCTCT +
Preference number: 5 (lower is better)
Translates to: WNLFSEAWEVVEAKPTRGYRAVI*FGIQSS
Trigger: AGAGGACTGAATCCCAAACAAGATTACTGCTCTATA...GCCTCTGGTGGGCTTGGCCTCCACCACCTCCCACGCTTCTGAGAAGAGGTTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp TGGGAATGGTGCTGTGGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTTCTGGAAGATGCTGTaGAAAGCAGGAGCACTCTGC +
Preference number: 5 (lower is better)
Translates to: WEWCCGRSGHRSPIWNLFFWKML*KAGALC
Trigger: GCAGAGTGCTCCTGCTTTCAACAGCATCTTCCAGAA...GAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACCATTCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp GGTGCTGTGGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTCAGAAGGCACAGAAGCCCAATTaGGAACCTCTTCTCAGAAGC +
Preference number: 5 (lower is better)
Translates to: GAVDALGTEAQFGTSSQKAQKPN*EPLLRS
Trigger: GCTTCTGAGAAGAGGTTCCAAATTGGGCTTCTGTGC...CTTCTGAGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp TATTATCCAGCAGCTGGAGGAGACGGAGTATGGCAGACTCTGGAATGCCATTTGTCTTCTTCGCTCGTCTaGGCACAGAGGCTCTGTTCC +
Preference number: 5 (lower is better)
Translates to: YYPAAGGDGVWQTLECHLSSSLV*AQRLCS
Trigger: GGAACAGAGCCTCTGTGCCAAGACGAGCGAAGAAGA...CAAATGGCATTCCAGAGTCTGCCATACTCCGTCTCCTCCAGCTGCTGGATAATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp GCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTCAGAAGCGTGGGAGGTGGGTATGCTTTCCAGTGTaGGAGGAGTATCAACTTGAG +
Preference number: 5 (lower is better)
Translates to: ALGTEAQFGTSSQKRGRWVCFPV*EEYQLE
Trigger: CTCAAGTTGATACTCCTCCAACACTGGAAAGCATAC...CCACCTCCCACGCTTCTGAGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp TGGGAATGGTGCTGTGGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCCGCTGTCGTTGCAAATaGCAAGAGTTGGATCATCTG +
Preference number: 5 (lower is better)
Translates to: WEWCCGRSGHRSPIWNLFRCRCK*QELDHL
Trigger: CAGATGATCCAACTCTTGCAATTTGCAACGACAGCG...GAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACCATTCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp TCCAAGGCATGCTTCAGTTATACTGCAGCCTGGCCAACCACTGTTCCCTGTAGAGAGCCTCCGCTGTCGTaGCAAATTGCAAGAGTTGGA +
Preference number: 5 (lower is better)
Translates to: SKACFSYTAAWPTTVPCREPPLS*QIARVG
Trigger: TCCAACTCTTGCAATTTGCAACGACAGCGGAGGCTC...TCTACAGGGAACAGTGGTTGGCCAGGCTGCAGTATAACTGAAGCATGCCTTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp ACTGGGAGTCTACACTGGGAATGGTGCTGTGGACGCTCTGGGCACAGAAGCCCAGGGATTCACGTAATTTaGTACTGCTACAAAGTGCCA +
Preference number: 5 (lower is better)
Translates to: TGSLHWEWCCGRSGHRSPGIHVI*YCYKVP
Trigger: TGGCACTTTGTAGCAGTACAAAATTACGTGAATCCC...TGGGCTTCTGTGCCCAGAGCGTCCACAGCACCATTCCCAGTGTAGACTCCCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp GCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTCAGAAGCGTGGGAGGTGGTGTCTCCAATTCCTCTaGTGTTTGCCGATCAATCAC +
Preference number: 5 (lower is better)
Translates to: ALGTEAQFGTSSQKRGRWCLQFL*CLPINH
Trigger: GTGATTGATCGGCAAACACAAGAGGAATTGGAGACA...CCACCTCCCACGCTTCTGAGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp GGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTCAGAAGCGTGGGAGTGTCTCCAATTCCTCTaGTGTTTGCCGATCAATCAC +
Preference number: 5 (lower is better)
Translates to: GRSGHRSPIWNLFSEAWECLQFL*CLPINH
Trigger: GTGATTGATCGGCAAACACAAGAGGAATTGGAGACA...CTCCCACGCTTCTGAGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp GTGGAGAAGACTGGGAGTCTACACTGGGAATGGTGCTGTGGACGCTCTGGGCACATAGCTACTGATGGATaGATAACAAGCCTTCTCTCC +
Preference number: 5 (lower is better)
Translates to: VEKTGSLHWEWCCGRSGHIATDG*ITSLLS
Trigger: GGAGAGAAGGCTTGTTATCAATCCATCAGTAGCTAT...GTGCCCAGAGCGTCCACAGCACCATTCCCAGTGTAGACTCCCAGTCTTCTCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp GGGAATGGTGCTGTGGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTATGCTGCTCCATCACTaGGATTTTTCCTTGGTCTGG +
Preference number: 5 (lower is better)
Translates to: GNGAVDALGTEAQFGTSSMLLHH*DFSLVW
Trigger: CCAGACCAAGGAAAAATCCAAGTGATGGAGCAGCAT...AGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACCATTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp TGGAACCTCTTCTCAGAAGCGTGGGAGGTGGTGGAGGCCAAGCCCACCAGAGGCTATACAAGGAGCTTATaGCCCATAACAACTTGTTCA +
Preference number: 5 (lower is better)
Translates to: WNLFSEAWEVVEAKPTRGYTRSL*PITTCS
Trigger: TGAACAAGTTGTTATGGGCAATAAGCTCCTTGTATA...GCCTCTGGTGGGCTTGGCCTCCACCACCTCCCACGCTTCTGAGAAGAGGTTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp GGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTCAGAAGCGTGGGAGTTTACAAACAAGGTGTaGTCAGGCTTTGCAAGCTGC +
Preference number: 5 (lower is better)
Translates to: GRSGHRSPIWNLFSEAWEFTNKV*SGFASC
Trigger: GCAGCTTGCAAAGCCTGACAACACCTTGTTTGTAAA...CTCCCACGCTTCTGAGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp GCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTCAGAAGCGTGGGAGGTGGGTAGCACTCAAGGACTaGCAGAGTCTCTATAACTTG +
Preference number: 5 (lower is better)
Translates to: ALGTEAQFGTSSQKRGRWVALKD*QSLYNL
Trigger: CAAGTTATAGAGACTCTGCAAGTCCTTGAGTGCTAC...CCACCTCCCACGCTTCTGAGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp GGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTCAGAAGCGTGGGAGTTAGAAGGCTGGTTGTaGTTTCCAGCAGGGTTTGTT +
Preference number: 5 (lower is better)
Translates to: GRSGHRSPIWNLFSEAWELEGWL*FPAGFV
Trigger: AACAAACCCTGCTGGAAACAACAACCAGCCTTCTAA...CTCCCACGCTTCTGAGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp CAATGTGGAGAAGACTGGGAGTCTACACTGGGAATGGTGCTGTGGACGCTCTGGTTCATCAGCCATTTCTaGGCGTCTCTTGTACTGCTG +
Preference number: 5 (lower is better)
Translates to: QCGEDWESTLGMVLWTLWFISHF*ASLVLL
Trigger: CAGCAGTACAAGAGACGCCAAGAAATGGCTGATGAA...CCAGAGCGTCCACAGCACCATTCCCAGTGTAGACTCCCAGTCTTCTCCACATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp TGGGAATGGTGCTGTGGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTTCATCAGCCATTTCTaGGCGTCTCTTGTACTGCTG +
Preference number: 5 (lower is better)
Translates to: WEWCCGRSGHRSPIWNLFFISHF*ASLVLL
Trigger: CAGCAGTACAAGAGACGCCAAGAAATGGCTGATGAA...GAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACCATTCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp GGTGCTGTGGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTCAGAAGGCATGTCCATCTTGTTaGGCCCTCAAATTCCACAGT +
Preference number: 5 (lower is better)
Translates to: GAVDALGTEAQFGTSSQKACPSC*ALKFHS
Trigger: ACTGTGGAATTTGAGGGCCAAACAAGATGGACATGC...CTTCTGAGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp CCAGCAGCTGGAGGAGACGGAGTATGGCAGACTCTGGAATGCCATTTGTGTGAGGCATGTCCATCTTGTTaGGCCCTCAAATTCCACAGT +
Preference number: 5 (lower is better)
Translates to: PAAGGDGVWQTLECHLCEACPSC*ALKFHS
Trigger: ACTGTGGAATTTGAGGGCCAAACAAGATGGACATGC...CTCACACAAATGGCATTCCAGAGTCTGCCATACTCCGTCTCCTCCAGCTGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp GCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTCAGAAGCGTGGGAGGTGGTGTAGCATGTCCATCTaGTTTGGCCCTCAAATTCCA +
Preference number: 5 (lower is better)
Translates to: ALGTEAQFGTSSQKRGRWCSMSI*FGPQIP
Trigger: TGGAATTTGAGGGCCAAACAAGATGGACATGCTACA...CCACCTCCCACGCTTCTGAGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp CTCTCTCCAAGGCATGCTTCAGTTATACTGCAGCCTGGCCAACCACTGTTCCCTTTCTGGAAGATGCTGTaGAAAGCAGGAGCACTCTGC +
Preference number: 5 (lower is better)
Translates to: LSPRHASVILQPGQPLFPFWKML*KAGALC
Trigger: GCAGAGTGCTCCTGCTTTCAACAGCATCTTCCAGAA...AGGGAACAGTGGTTGGCCAGGCTGCAGTATAACTGAAGCATGCCTTGGAGAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp TGGGAATGGTGCTGTGGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCCACCACTATCTGAGCTaGCCACAGATGAAGTATCAT +
Preference number: 5 (lower is better)
Translates to: WEWCCGRSGHRSPIWNLFHHYLS*PQMKYH
Trigger: ATGATACTTCATCTGTGGCAAGCTCAGATAGTGGTG...GAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACCATTCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp CCAGCAGCTGGAGGAGACGGAGTATGGCAGACTCTGGAATGCCATTTGTGTGAGAGTCTTGAGCAATCATaGTTGATACTGAGGGCAGAG +
Preference number: 5 (lower is better)
Translates to: PAAGGDGVWQTLECHLCESLEQS*LILRAE
Trigger: CTCTGCCCTCAGTATCAACAATGATTGCTCAAGACT...CTCACACAAATGGCATTCCAGAGTCTGCCATACTCCGTCTCCTCCAGCTGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp CAATGTGGAGAAGACTGGGAGTCTACACTGGGAATGGTGCTGTGGACGCTCTGGCAAGTCTTTCATTACTaGGGGTGTGATTCCCACCAA +
Preference number: 5 (lower is better)
Translates to: QCGEDWESTLGMVLWTLWQVFHY*GCDSHQ
Trigger: TTGGTGGGAATCACACCCCAAGTAATGAAAGACTTG...CCAGAGCGTCCACAGCACCATTCCCAGTGTAGACTCCCAGTCTTCTCCACATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000625842.3
CDS-3UTR CAA 90 bp GGGAATGGTGCTGTGGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTTTTACAAACAAGGTGTaGTCAGGCTTTGCAAGCTGC +
Preference number: 5 (lower is better)
Translates to: GNGAVDALGTEAQFGTSSFTNKV*SGFASC
Trigger: GCAGCTTGCAAAGCCTGACAACACCTTGTTTGTAAA...AGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACCATTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp GCACAGAAGCCCAATTTGGAACCTCTTCTCAGAAGCGTGGGAGGTGGTGGAGGCCCTCAATATGATCCATaGCTTTCTGCCATACAGACT +
Preference number: 5 (lower is better)
Translates to: AQKPNLEPLLRSVGGGGGPQYDP*LSAIQT
Trigger: AGTCTGTATGGCAGAAAGCAATGGATCATATTGAGG...GCCTCCACCACCTCCCACGCTTCTGAGAAGAGGTTCCAAATTGGGCTTCTGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp GGTGCTGTGGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTCAGAAGCAGAGTCTCTATAACTaGGGTTGGGTTGAACTGACA +
Preference number: 5 (lower is better)
Translates to: GAVDALGTEAQFGTSSQKQSLYN*GWVELT
Trigger: TGTCAGTTCAACCCAACCCAAGTTATAGAGACTCTG...CTTCTGAGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp CCAGCAGCTGGAGGAGACGGAGTATGGCAGACTCTGGAATGCCATTTGTGTGAGCAGAGTCTCTATAACTaGGGTTGGGTTGAACTGACA +
Preference number: 5 (lower is better)
Translates to: PAAGGDGVWQTLECHLCEQSLYN*GWVELT
Trigger: TGTCAGTTCAACCCAACCCAAGTTATAGAGACTCTG...CTCACACAAATGGCATTCCAGAGTCTGCCATACTCCGTCTCCTCCAGCTGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp TGTATTATCCAGCAGCTGGAGGAGACGGAGTATGGCAGACTCTGGAATGCCATTTCTGAGGGGCCATCATaGCCTCCAATAACGGAAACC +
Preference number: 5 (lower is better)
Translates to: CIIQQLEETEYGRLWNAISEGPS*PPITET
Trigger: GGTTTCCGTTATTGGAGGCAATGATGGCCCCTCAGA...AATGGCATTCCAGAGTCTGCCATACTCCGTCTCCTCCAGCTGCTGGATAATACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp AATGGTGCTGTGGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTCAGTTCATCAGCCATTTCTaGGCGTCTCTTGTACTGCTG +
Preference number: 5 (lower is better)
Translates to: NGAVDALGTEAQFGTSSQFISHF*ASLVLL
Trigger: CAGCAGTACAAGAGACGCCAAGAAATGGCTGATGAA...CTGAGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp TGGGAATGGTGCTGTGGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCATCAAATGCTTGGATTaGCTGTGGATCCAGAACAGG +
Preference number: 5 (lower is better)
Translates to: WEWCCGRSGHRSPIWNLFIKCLD*LWIQNR
Trigger: CCTGTTCTGGATCCACAGCAAATCCAAGCATTTGAT...GAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACCATTCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp GGGAATGGTGCTGTGGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTACTCTGGAATGCCATTaGTGTGAGTTCCACCTACTT +
Preference number: 5 (lower is better)
Translates to: GNGAVDALGTEAQFGTSSTLECH*CEFHLL
Trigger: AAGTAGGTGGAACTCACACAAATGGCATTCCAGAGT...AGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACCATTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS GCA 90 bp ATCTCCTCTGCAGAAGGCAAGCATGGGATTCACGTAATTTTGTACTaGTACAAAGTGCCAGGCCAGCAGTGGCACACTGGAAGGATCCAT +
Preference number: 5 (lower is better)
Translates to: ISSAEGKHGIHVILY*YKVPGQQWHTGRIH
Trigger: ATGGATCCTTCCAGTGTGCCACTGCTGGCCTGGCACTTTGTAGCAGTACAAAATTACGTGAATCCCATGCTTGCCTTCTGCAGAGGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS GCA 90 bp GCTCCATGGAGTCATCAATCCTCAGTCACAGGTGGAGGAATGAGCTaGAGCTGGAAGTTCTCATTCTGGAAGATGCTGTTGAAAGCAGGA +
Preference number: 5 (lower is better)
Translates to: APWSHQSSVTGGGMS*SWKFSFWKMLLKAG
Trigger: TCCTGCTTTCAACAGCATCTTCCAGAATGAGAACTTCCAGCTGCAGCTCATTCCTCCACCTGTGACTGAGGATTGATGACTCCATGGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000492449.5
ENST00000625842.3
CDS CCA 90 bp TGGAGTCATCAATCCTCAGTCACAGGTGGAGGAATGAGCTGCAGCTaGAAGTTCTCATTCTGGAAGATGCTGTTGAAAGCAGGAGCACTC +
Preference number: 5 (lower is better)
Translates to: WSHQSSVTGGGMSCS*KFSFWKMLLKAGAL
Trigger: GAGTGCTCCTGCTTTCAACAGCATCTTCCAGAATGAGAACTTCCAGCTGCAGCTCATTCCTCCACCTGTGACTGAGGATTGATGACTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000492449.5
ENST00000625842.3
CDS-3UTR CAA 90 bp GCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTCAGAAGCGTGGGAGGTGGTGGAGGAGTATCAACTaGAGGAATATCAAACTCCTT +
Preference number: 5 (lower is better)
Translates to: ALGTEAQFGTSSQKRGRWWRSIN*RNIKLL
Trigger: AAGGAGTTTGATATTCCTCAAGTTGATACTCCTCCA...CCACCTCCCACGCTTCTGAGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp GCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTCAGAAGCGTGGGAGGTGGTTCTTCCTTTTTAAGTaGGTCCTGTCACCACTATCT +
Preference number: 5 (lower is better)
Translates to: ALGTEAQFGTSSQKRGRWFFLFK*VLSPLS
Trigger: AGATAGTGGTGACAGGACCAACTTAAAAAGGAAGAA...CCACCTCCCACGCTTCTGAGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp GGTGCTGTGGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTCAGAAGCTTGAGCAATCATTGTaGATACTGAGGGCAGAGATA +
Preference number: 5 (lower is better)
Translates to: GAVDALGTEAQFGTSSQKLEQSL*ILRAEI
Trigger: TATCTCTGCCCTCAGTATCAACAATGATTGCTCAAG...CTTCTGAGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp GGGAATGGTGCTGTGGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTCTTGAGCAATCATTGTaGATACTGAGGGCAGAGATA +
Preference number: 5 (lower is better)
Translates to: GNGAVDALGTEAQFGTSSLEQSL*ILRAEI
Trigger: TATCTCTGCCCTCAGTATCAACAATGATTGCTCAAG...AGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACCATTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp GGAGAAGACTGGGAGTCTACACTGGGAATGGTGCTGTGGACGCTCTGGGCACAGGATGAGCATCTGTTATaGATCTTAGAAGTTTTCCAC +
Preference number: 5 (lower is better)
Translates to: GEDWESTLGMVLWTLWAQDEHLL*ILEVFH
Trigger: GTGGAAAACTTCTAAGATCAATAACAGATGCTCATC...CTGTGCCCAGAGCGTCCACAGCACCATTCCCAGTGTAGACTCCCAGTCTTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp CCTGGCCAACCACTGTTCCCTGTAGAAGTTGAAGTTCCTCTGTATTATCCAGCAGAGCCTCCGCTGTCGTaGCAAATTGCAAGAGTTGGA +
Preference number: 5 (lower is better)
Translates to: PGQPLFPVEVEVPLYYPAEPPLS*QIARVG
Trigger: TCCAACTCTTGCAATTTGCAACGACAGCGGAGGCTC...TGCTGGATAATACAGAGGAACTTCAACTTCTACAGGGAACAGTGGTTGGCCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp GGTGCTGTGGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTCAGAAGCAATTCCTCTTGTGTTaGCCGATCAATCACATGCAA +
Preference number: 5 (lower is better)
Translates to: GAVDALGTEAQFGTSSQKQFLLC*PINHMQ
Trigger: TTGCATGTGATTGATCGGCAAACACAAGAGGAATTG...CTTCTGAGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp ATCCAGCAGCTGGAGGAGACGGAGTATGGCAGACTCTGGAATGCCATTTGTGTGTGTCTCCAATTCCTCTaGTGTTTGCCGATCAATCAC +
Preference number: 5 (lower is better)
Translates to: IQQLEETEYGRLWNAICVCLQFL*CLPINH
Trigger: GTGATTGATCGGCAAACACAAGAGGAATTGGAGACA...CACACAAATGGCATTCCAGAGTCTGCCATACTCCGTCTCCTCCAGCTGCTGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp CAGTGTCTGCTCTCTCCAAGGCATGCTTCAGTTATACTGCAGCCTGGCCAACCACACTTGGATTTTTCCTaGGTCTGGGCACTTTTTCAG +
Preference number: 5 (lower is better)
Translates to: QCLLSPRHASVILQPGQPHLDFS*VWALFQ
Trigger: CTGAAAAAGTGCCCAGACCAAGGAAAAATCCAAGTG...TGGTTGGCCAGGCTGCAGTATAACTGAAGCATGCCTTGGAGAGAGCAGACACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp ACTGGGAGTCTACACTGGGAATGGTGCTGTGGACGCTCTGGGCACAGAAGCCCATATACAAGGAGCTTATaGCCCATAACAACTTGTTCA +
Preference number: 5 (lower is better)
Translates to: TGSLHWEWCCGRSGHRSPYTRSL*PITTCS
Trigger: TGAACAAGTTGTTATGGGCAATAAGCTCCTTGTATA...TGGGCTTCTGTGCCCAGAGCGTCCACAGCACCATTCCCAGTGTAGACTCCCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp GCAAGGAAGGTAAAGAGACATCCTACTTGTGAGGGGGTAAAGTCTGAATTCTCCAGGTGTTGTCAGGCTTaGCAAGCTGCCGAGCAAGGA +
Preference number: 5 (lower is better)
Translates to: ARKVKRHPTCEGVKSEFSRCCQA*QAAEQG
Trigger: TCCTTGCTCGGCAGCTTGCAAAGCCTGACAACACCT...GGAGAATTCAGACTTTACCCCCTCACAAGTAGGATGTCTCTTTACCTTCCTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452140.5
CDS-3UTR CAA 90 bp CAGTGTCTGCTCTCTCCAAGGCATGCTTCAGTTATACTGCAGCCTGGCCAACCATTTACAAACAAGGTGTaGTCAGGCTTTGCAAGCTGC +
Preference number: 5 (lower is better)
Translates to: QCLLSPRHASVILQPGQPFTNKV*SGFASC
Trigger: GCAGCTTGCAAAGCCTGACAACACCTTGTTTGTAAA...TGGTTGGCCAGGCTGCAGTATAACTGAAGCATGCCTTGGAGAGAGCAGACACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp GCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTCAGAAGCGTGGGAGGTGGTATAGAGCAGTAATCTaGTTTGGGATTCAGTCCTCT +
Preference number: 5 (lower is better)
Translates to: ALGTEAQFGTSSQKRGRWYRAVI*FGIQSS
Trigger: AGAGGACTGAATCCCAAACAAGATTACTGCTCTATA...CCACCTCCCACGCTTCTGAGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp ACAGCAATGTGGAGAAGACTGGGAGTCTACACTGGGAATGGTGCTGTGGACGCTACTCTGGAATGCCATTaGTGTGAGTTCCACCTACTT +
Preference number: 5 (lower is better)
Translates to: TAMWRRLGVYTGNGAVDATLECH*CEFHLL
Trigger: AAGTAGGTGGAACTCACACAAATGGCATTCCAGAGT...AGCGTCCACAGCACCATTCCCAGTGTAGACTCCCAGTCTTCTCCACATTGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp GGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTCAGAAGCGTGGGAGAACACGGAGCATTTATaGTTAGAAAGGGCAAGTCTT +
Preference number: 5 (lower is better)
Translates to: GRSGHRSPIWNLFSEAWENTEHL*LERASL
Trigger: AAGACTTGCCCTTTCTAACAATAAATGCTCCGTGTT...CTCCCACGCTTCTGAGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS TCA 90 bp TGTCTAAACCACCATTCCTTGCCCCCAGTTGGAATGCAGGTTCCATaGGAGAGCAAAGACCAGATCTGCCTTGTTCACCATTCTATTCCC +
Preference number: 5 (lower is better)
Translates to: CLNHHSLPPVGMQVP*ESKDQICLVHHSIP
Trigger: GGGAATAGAATGGTGAACAAGGCAGATCTGGTCTTTGCTCTCTCATGGAACCTGCATTCCAACTGGGGGCAAGGAATGGTGGTTTAGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445089.5
CDS CCA 90 bp TCAAAGACTTCAGAGCTTCAGAGTGTAGATGAGGAATGGCTGAACTaGACAGCTTCTGAGGGGCCATCATTGCCTCCAATAACGGAAACC +
Preference number: 5 (lower is better)
Translates to: SKTSELQSVDEEWLN*TASEGPSLPPITET
Trigger: GGTTTCCGTTATTGGAGGCAATGATGGCCCCTCAGAAGCTGTCCAGTTCAGCCATTCCTCATCTACACTCTGAAGCTCTGAAGTCTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000488255.1
ENST00000492449.5
ENST00000625842.3
CDS-3UTR CAA 90 bp CCAGCAGCTGGAGGAGACGGAGTATGGCAGACTCTGGAATGCCATTTGTGTGAGTCAATCAGATCATTTTaGAACTCCAGTTCCTTGTCC +
Preference number: 5 (lower is better)
Translates to: PAAGGDGVWQTLECHLCESIRSF*NSSSLS
Trigger: GGACAAGGAACTGGAGTTCAAAAATGATCTGATTGA...CTCACACAAATGGCATTCCAGAGTCTGCCATACTCCGTCTCCTCCAGCTGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp TGGGAATGGTGCTGTGGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTGGAGGAGTATCAACTaGAGGAATATCAAACTCCTT +
Preference number: 5 (lower is better)
Translates to: WEWCCGRSGHRSPIWNLFWRSIN*RNIKLL
Trigger: AAGGAGTTTGATATTCCTCAAGTTGATACTCCTCCA...GAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACCATTCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp TCCAAGGCATGCTTCAGTTATACTGCAGCCTGGCCAACCACTGTTCCCTGTAGAGTATGCTTTCCAGTGTaGGAGGAGTATCAACTTGAG +
Preference number: 5 (lower is better)
Translates to: SKACFSYTAAWPTTVPCRVCFPV*EEYQLE
Trigger: CTCAAGTTGATACTCCTCCAACACTGGAAAGCATAC...TCTACAGGGAACAGTGGTTGGCCAGGCTGCAGTATAACTGAAGCATGCCTTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp TCCAAGGCATGCTTCAGTTATACTGCAGCCTGGCCAACCACTGTTCCCTGTAGAAGTCTTGAGCAATCATaGTTGATACTGAGGGCAGAG +
Preference number: 5 (lower is better)
Translates to: SKACFSYTAAWPTTVPCRSLEQS*LILRAE
Trigger: CTCTGCCCTCAGTATCAACAATGATTGCTCAAGACT...TCTACAGGGAACAGTGGTTGGCCAGGCTGCAGTATAACTGAAGCATGCCTTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp TATTATCCAGCAGCTGGAGGAGACGGAGTATGGCAGACTCTGGAATGCCATTTGCGCTGTCGTTGCAAATaGCAAGAGTTGGATCATCTG +
Preference number: 5 (lower is better)
Translates to: YYPAAGGDGVWQTLECHLRCRCK*QELDHL
Trigger: CAGATGATCCAACTCTTGCAATTTGCAACGACAGCG...CAAATGGCATTCCAGAGTCTGCCATACTCCGTCTCCTCCAGCTGCTGGATAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp TCCAAGGCATGCTTCAGTTATACTGCAGCCTGGCCAACCACTGTTCCCTGTAGACACTTGGATTTTTCCTaGGTCTGGGCACTTTTTCAG +
Preference number: 5 (lower is better)
Translates to: SKACFSYTAAWPTTVPCRHLDFS*VWALFQ
Trigger: CTGAAAAAGTGCCCAGACCAAGGAAAAATCCAAGTG...TCTACAGGGAACAGTGGTTGGCCAGGCTGCAGTATAACTGAAGCATGCCTTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp AATGGTGCTGTGGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTCAGATCCACAATTCGCTGTaGATATTCCACAGCTTGCTT +
Preference number: 5 (lower is better)
Translates to: NGAVDALGTEAQFGTSSQIHNSL*IFHSLL
Trigger: AAGCAAGCTGTGGAATATCAACAGCGAATTGTGGAT...CTGAGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp CTCTCTCCAAGGCATGCTTCAGTTATACTGCAGCCTGGCCAACCACTGTTCCCTATCCACAATTCGCTGTaGATATTCCACAGCTTGCTT +
Preference number: 5 (lower is better)
Translates to: LSPRHASVILQPGQPLFPIHNSL*IFHSLL
Trigger: AAGCAAGCTGTGGAATATCAACAGCGAATTGTGGAT...AGGGAACAGTGGTTGGCCAGGCTGCAGTATAACTGAAGCATGCCTTGGAGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp TGTATTATCCAGCAGCTGGAGGAGACGGAGTATGGCAGACTCTGGAATGCCATTCATGAATACCTTCCCTaGGGTCAAGAAGACTCCTCA +
Preference number: 5 (lower is better)
Translates to: CIIQQLEETEYGRLWNAIHEYLP*GQEDSS
Trigger: TGAGGAGTCTTCTTGACCCAAGGGAAGGTATTCATG...AATGGCATTCCAGAGTCTGCCATACTCCGTCTCCTCCAGCTGCTGGATAATACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp TCCAAGGCATGCTTCAGTTATACTGCAGCCTGGCCAACCACTGTTCCCTGTAGAGTAGCACTCAAGGACTaGCAGAGTCTCTATAACTTG +
Preference number: 5 (lower is better)
Translates to: SKACFSYTAAWPTTVPCRVALKD*QSLYNL
Trigger: CAAGTTATAGAGACTCTGCAAGTCCTTGAGTGCTAC...TCTACAGGGAACAGTGGTTGGCCAGGCTGCAGTATAACTGAAGCATGCCTTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp GCACAGAAGCCCAATTTGGAACCTCTTCTCAGAAGCGTGGGAGGTGGTGGAGGCTTTGGTATTTTCACCTaGATGTGTTACCTCTTGAAG +
Preference number: 5 (lower is better)
Translates to: AQKPNLEPLLRSVGGGGGFGIFT*MCYLLK
Trigger: CTTCAAGAGGTAACACATCAAGGTGAAAATACCAAA...GCCTCCACCACCTCCCACGCTTCTGAGAAGAGGTTCCAAATTGGGCTTCTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp TGTATTATCCAGCAGCTGGAGGAGACGGAGTATGGCAGACTCTGGAATGCCATTCCAAAGTGCCTCACGTaGCTGCTGGTTCAAATTATG +
Preference number: 5 (lower is better)
Translates to: CIIQQLEETEYGRLWNAIPKCLT*LLVQIM
Trigger: CATAATTTGAACCAGCAGCAACGTGAGGCACTTTGG...AATGGCATTCCAGAGTCTGCCATACTCCGTCTCCTCCAGCTGCTGGATAATACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp ATAGGTTTTAACATGAACACATTAAAGGGAGATGGCCCTGGCCCCCACAGTGTCTTCTGGAAGATGCTGTaGAAAGCAGGAGCACTCTGC +
Preference number: 5 (lower is better)
Translates to: IGFNMNTLKGDGPGPHSVFWKML*KAGALC
Trigger: GCAGAGTGCTCCTGCTTTCAACAGCATCTTCCAGAA...GACACTGTGGGGGCCAGGGCCATCTCCCTTTAATGTGTTCATGTTAAAACCTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp CCAGCAGCTGGAGGAGACGGAGTATGGCAGACTCTGGAATGCCATTTGTGTGAGAACACGGAGCATTTATaGTTAGAAAGGGCAAGTCTT +
Preference number: 5 (lower is better)
Translates to: PAAGGDGVWQTLECHLCENTEHL*LERASL
Trigger: AAGACTTGCCCTTTCTAACAATAAATGCTCCGTGTT...CTCACACAAATGGCATTCCAGAGTCTGCCATACTCCGTCTCCTCCAGCTGCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp GGTGCTGTGGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTCAGAAGACAGAGTCGCAAAGCTaGATTCTGATCTTTTCCAAA +
Preference number: 5 (lower is better)
Translates to: GAVDALGTEAQFGTSSQKTESQS*ILIFSK
Trigger: TTTGGAAAAGATCAGAATCAAGCTTTGCGACTCTGT...CTTCTGAGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000625842.3
CDS CCA 90 bp TTCAGTCCTCTGGTGACCGAAGCTCTCAGGTTACACAATGACCAATaGAGATCTTGGTTTAGAAGGCTGGTTGTTGTTTCCAGCAGGGTT +
Preference number: 5 (lower is better)
Translates to: FSPLVTEALRLHNDQ*RSWFRRLVVVSSRV
Trigger: AACCCTGCTGGAAACAACAACCAGCCTTCTAAACCAAGATCTCCATTGGTCATTGTGTAACCTGAGAGCTTCGGTCACCAGAGGACTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000488255.1
ENST00000492449.5
ENST00000625842.3
CDS-3UTR CAA 90 bp ATCCAGCAGCTGGAGGAGACGGAGTATGGCAGACTCTGGAATGCCATTTGTGTGTGGAGGAGTATCAACTaGAGGAATATCAAACTCCTT +
Preference number: 5 (lower is better)
Translates to: IQQLEETEYGRLWNAICVWRSIN*RNIKLL
Trigger: AAGGAGTTTGATATTCCTCAAGTTGATACTCCTCCA...CACACAAATGGCATTCCAGAGTCTGCCATACTCCGTCTCCTCCAGCTGCTGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp ACTTATGCTACCCAACCTAGAGCTTCCTACGAGGCATGGGGAAGAGATGAGAACGTATGCTTTCCAGTGTaGGAGGAGTATCAACTTGAG +
Preference number: 5 (lower is better)
Translates to: TYATQPRASYEAWGRDENVCFPV*EEYQLE
Trigger: CTCAAGTTGATACTCCTCCAACACTGGAAAGCATAC...GTTCTCATCTCTTCCCCATGCCTCGTAGGAAGCTCTAGGTTGGGTAGCATAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424463.4
CDS-3UTR CAA 90 bp TGTATTATCCAGCAGCTGGAGGAGACGGAGTATGGCAGACTCTGGAATGCCATTCACCACTATCTGAGCTaGCCACAGATGAAGTATCAT +
Preference number: 5 (lower is better)
Translates to: CIIQQLEETEYGRLWNAIHHYLS*PQMKYH
Trigger: ATGATACTTCATCTGTGGCAAGCTCAGATAGTGGTG...AATGGCATTCCAGAGTCTGCCATACTCCGTCTCCTCCAGCTGCTGGATAATACA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp TCCAAGGCATGCTTCAGTTATACTGCAGCCTGGCCAACCACTGTTCCCTGTAGAATAGCTACTGATGGATaGATAACAAGCCTTCTCTCC +
Preference number: 5 (lower is better)
Translates to: SKACFSYTAAWPTTVPCRIATDG*ITSLLS
Trigger: GGAGAGAAGGCTTGTTATCAATCCATCAGTAGCTAT...TCTACAGGGAACAGTGGTTGGCCAGGCTGCAGTATAACTGAAGCATGCCTTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp GGTTTTAACATGAACACATTAAAGGGAGATGGCCCTGGCCCCCACAGTGTCTGCATAGCTACTGATGGATaGATAACAAGCCTTCTCTCC +
Preference number: 5 (lower is better)
Translates to: GFNMNTLKGDGPGPHSVCIATDG*ITSLLS
Trigger: GGAGAGAAGGCTTGTTATCAATCCATCAGTAGCTAT...GCAGACACTGTGGGGGCCAGGGCCATCTCCCTTTAATGTGTTCATGTTAAAACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp CTCTCTCCAAGGCATGCTTCAGTTATACTGCAGCCTGGCCAACCACTGTTCCCTTTCTGTAAGACAATCTaGTTTCAGGAGATGATCCAC +
Preference number: 5 (lower is better)
Translates to: LSPRHASVILQPGQPLFPFCKTI*FQEMIH
Trigger: GTGGATCATCTCCTGAAACAAGATTGTCTTACAGAA...AGGGAACAGTGGTTGGCCAGGCTGCAGTATAACTGAAGCATGCCTTGGAGAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp CTGCAGCCTGGCCAACCACTGTTCCCTGTAGAAGTTGAAGTTCCTCTGTATTATATGCTGCTCCATCACTaGGATTTTTCCTTGGTCTGG +
Preference number: 5 (lower is better)
Translates to: LQPGQPLFPVEVEVPLYYMLLHH*DFSLVW
Trigger: CCAGACCAAGGAAAAATCCAAGTGATGGAGCAGCAT...ATAATACAGAGGAACTTCAACTTCTACAGGGAACAGTGGTTGGCCAGGCTGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp GGTGCTGTGGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTCAGAAGTATACAAGGAGCTTATaGCCCATAACAACTTGTTCA +
Preference number: 5 (lower is better)
Translates to: GAVDALGTEAQFGTSSQKYTRSL*PITTCS
Trigger: TGAACAAGTTGTTATGGGCAATAAGCTCCTTGTATA...CTTCTGAGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp TCCAAGGCATGCTTCAGTTATACTGCAGCCTGGCCAACCACTGTTCCCTGTAGAATCCACAATTCGCTGTaGATATTCCACAGCTTGCTT +
Preference number: 5 (lower is better)
Translates to: SKACFSYTAAWPTTVPCRIHNSL*IFHSLL
Trigger: AAGCAAGCTGTGGAATATCAACAGCGAATTGTGGAT...TCTACAGGGAACAGTGGTTGGCCAGGCTGCAGTATAACTGAAGCATGCCTTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp CTGCAGCCTGGCCAACCACTGTTCCCTGTAGAAGTTGAAGTTCCTCTGTATTATTCGACTCTCTTCAAATaGAACTATGCCTCCAGCCTG +
Preference number: 5 (lower is better)
Translates to: LQPGQPLFPVEVEVPLYYSTLFK*NYASSL
Trigger: CAGGCTGGAGGCATAGTTCAATTTGAAGAGAGTCGA...ATAATACAGAGGAACTTCAACTTCTACAGGGAACAGTGGTTGGCCAGGCTGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp CCTGGCCAACCACTGTTCCCTGTAGAAGTTGAAGTTCCTCTGTATTATCCAGCACATGAATACCTTCCCTaGGGTCAAGAAGACTCCTCA +
Preference number: 5 (lower is better)
Translates to: PGQPLFPVEVEVPLYYPAHEYLP*GQEDSS
Trigger: TGAGGAGTCTTCTTGACCCAAGGGAAGGTATTCATG...TGCTGGATAATACAGAGGAACTTCAACTTCTACAGGGAACAGTGGTTGGCCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp CTGCAGCCTGGCCAACCACTGTTCCCTGTAGAAGTTGAAGTTCCTCTGTATTATCCAAAGTGCCTCACGTaGCTGCTGGTTCAAATTATG +
Preference number: 5 (lower is better)
Translates to: LQPGQPLFPVEVEVPLYYPKCLT*LLVQIM
Trigger: CATAATTTGAACCAGCAGCAACGTGAGGCACTTTGG...ATAATACAGAGGAACTTCAACTTCTACAGGGAACAGTGGTTGGCCAGGCTGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp AATGGTGCTGTGGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTCAGTATAGAGCAGTAATCTaGTTTGGGATTCAGTCCTCT +
Preference number: 5 (lower is better)
Translates to: NGAVDALGTEAQFGTSSQYRAVI*FGIQSS
Trigger: AGAGGACTGAATCCCAAACAAGATTACTGCTCTATA...CTGAGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp CAGTGTCTGCTCTCTCCAAGGCATGCTTCAGTTATACTGCAGCCTGGCCAACCAATTTCTTGGCGTCTCTaGTACTGCTGCAAACATATA +
Preference number: 5 (lower is better)
Translates to: QCLLSPRHASVILQPGQPISWRL*YCCKHI
Trigger: TATATGTTTGCAGCAGTACAAGAGACGCCAAGAAAT...TGGTTGGCCAGGCTGCAGTATAACTGAAGCATGCCTTGGAGAGAGCAGACACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp ATAGGTTTTAACATGAACACATTAAAGGGAGATGGCCCTGGCCCCCACAGTGTCGCATGTCCATCTTGTTaGGCCCTCAAATTCCACAGT +
Preference number: 5 (lower is better)
Translates to: IGFNMNTLKGDGPGPHSVACPSC*ALKFHS
Trigger: ACTGTGGAATTTGAGGGCCAAACAAGATGGACATGC...GACACTGTGGGGGCCAGGGCCATCTCCCTTTAATGTGTTCATGTTAAAACCTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp TATTATCCAGCAGCTGGAGGAGACGGAGTATGGCAGACTCTGGAATGCCATTTGTGTAGCATGTCCATCTaGTTTGGCCCTCAAATTCCA +
Preference number: 5 (lower is better)
Translates to: YYPAAGGDGVWQTLECHLCSMSI*FGPQIP
Trigger: TGGAATTTGAGGGCCAAACAAGATGGACATGCTACA...CAAATGGCATTCCAGAGTCTGCCATACTCCGTCTCCTCCAGCTGCTGGATAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp CAACCACTGTTCCCTGTAGAAGTTGAAGTTCCTCTGTATTATCCAGCAGCTGGAGCACAGAAGCCCAATTaGGAACCTCTTCTCAGAAGC +
Preference number: 5 (lower is better)
Translates to: QPLFPVEVEVPLYYPAAGAQKPN*EPLLRS
Trigger: GCTTCTGAGAAGAGGTTCCAAATTGGGCTTCTGTGC...TCCAGCTGCTGGATAATACAGAGGAACTTCAACTTCTACAGGGAACAGTGGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS TCA 90 bp AACTCAGCTTTTTCTGCCATCCGGATGAGTCGACTCTCTTCAAATTaGACTATGCCTCCAGCCTGCAGCAATTCTAAAAGGACCTGCTGT +
Preference number: 5 (lower is better)
Translates to: NSAFSAIRMSRLSSN*TMPPACSNSKRTCC
Trigger: ACAGCAGGTCCTTTTAGAATTGCTGCAGGCTGGAGGCATAGTTCAATTTGAAGAGAGTCGACTCATCCGGATGGCAGAAAAAGCTGAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000463687.1
ENST00000492449.5
ENST00000625842.3
CDS CCA 90 bp CAGACGGTAGCACTCAAGGACTTGCAGAGTCTCTATAACTTGGGTTaGGTTGAACTGACACAACAGCTCAATGAACTGCTCTGTGATACA +
Preference number: 5 (lower is better)
Translates to: QTVALKDLQSLYNLG*VELTQQLNELLCDT
Trigger: TGTATCACAGAGCAGTTCATTGAGCTGTTGTGTCAGTTCAACCCAACCCAAGTTATAGAGACTCTGCAAGTCCTTGAGTGCTACCGTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000492449.5
ENST00000625842.3
CDS CCA 90 bp ACAAGTTCCACAAAAACATCAAGGAAGCTCCTGAAAGGACTAGGATaGGGTTTTGACTCATCTGAAGTCTTTCGCTGCAGCAGAAGGCAG +
Preference number: 5 (lower is better)
Translates to: TSSTKTSRKLLKGLG*GFDSSEVFRCSRRQ
Trigger: CTGCCTTCTGCTGCAGCGAAAGACTTCAGATGAGTCAAAACCCCATCCTAGTCCTTTCAGGAGCTTCCTTGATGTTTTTGTGGAACTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458721.5
CDS-3UTR CAA 90 bp TGTTGGAGGAGTATCAACTTGAGGAATATCAAACTCCTTGTCATCAATCTGTGGTCTTCTTCGCTCGTCTaGGCACAGAGGCTCTGTTCC +
Preference number: 5 (lower is better)
Translates to: CWRSINLRNIKLLVINLWSSSLV*AQRLCS
Trigger: GGAACAGAGCCTCTGTGCCAAGACGAGCGAAGAAGA...CCACAGATTGATGACAAGGAGTTTGATATTCCTCAAGTTGATACTCCTCCAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424721.5
CDS-3UTR CAA 90 bp CTGCAGCCTGGCCAACCACTGTTCCCTGTAGAAGTTGAAGTTCCTCTGTATTATGTATGCTTTCCAGTGTaGGAGGAGTATCAACTTGAG +
Preference number: 5 (lower is better)
Translates to: LQPGQPLFPVEVEVPLYYVCFPV*EEYQLE
Trigger: CTCAAGTTGATACTCCTCCAACACTGGAAAGCATAC...ATAATACAGAGGAACTTCAACTTCTACAGGGAACAGTGGTTGGCCAGGCTGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp GGTTTTAACATGAACACATTAAAGGGAGATGGCCCTGGCCCCCACAGTGTCTGCTTCTTCCTTTTTAAGTaGGTCCTGTCACCACTATCT +
Preference number: 5 (lower is better)
Translates to: GFNMNTLKGDGPGPHSVCFFLFK*VLSPLS
Trigger: AGATAGTGGTGACAGGACCAACTTAAAAAGGAAGAA...GCAGACACTGTGGGGGCCAGGGCCATCTCCCTTTAATGTGTTCATGTTAAAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp CTGCAGCCTGGCCAACCACTGTTCCCTGTAGAAGTTGAAGTTCCTCTGTATTATCAGAGTCTCTATAACTaGGGTTGGGTTGAACTGACA +
Preference number: 5 (lower is better)
Translates to: LQPGQPLFPVEVEVPLYYQSLYN*GWVELT
Trigger: TGTCAGTTCAACCCAACCCAAGTTATAGAGACTCTG...ATAATACAGAGGAACTTCAACTTCTACAGGGAACAGTGGTTGGCCAGGCTGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp CCTGGCCAACCACTGTTCCCTGTAGAAGTTGAAGTTCCTCTGTATTATCCAGCAGTAGCACTCAAGGACTaGCAGAGTCTCTATAACTTG +
Preference number: 5 (lower is better)
Translates to: PGQPLFPVEVEVPLYYPAVALKD*QSLYNL
Trigger: CAAGTTATAGAGACTCTGCAAGTCCTTGAGTGCTAC...TGCTGGATAATACAGAGGAACTTCAACTTCTACAGGGAACAGTGGTTGGCCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp AATGGTGCTGTGGACGCTCTGGGCACAGAAGCCCAATTTGGAACCTCTTCTCAGTTTGGTATTTTCACCTaGATGTGTTACCTCTTGAAG +
Preference number: 5 (lower is better)
Translates to: NGAVDALGTEAQFGTSSQFGIFT*MCYLLK
Trigger: CTTCAAGAGGTAACACATCAAGGTGAAAATACCAAA...CTGAGAAGAGGTTCCAAATTGGGCTTCTGTGCCCAGAGCGTCCACAGCACCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp TCCAAGGCATGCTTCAGTTATACTGCAGCCTGGCCAACCACTGTTCCCTGTAGATGTTTCCAGCAGGGTTaGTTCATAGTTAAAGGTATC +
Preference number: 5 (lower is better)
Translates to: SKACFSYTAAWPTTVPCRCFQQG*FIVKGI
Trigger: GATACCTTTAACTATGAACAAACCCTGCTGGAAACA...TCTACAGGGAACAGTGGTTGGCCAGGCTGCAGTATAACTGAAGCATGCCTTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp CCTGGCCAACCACTGTTCCCTGTAGAAGTTGAAGTTCCTCTGTATTATCCAGCATTAGAAGGCTGGTTGTaGTTTCCAGCAGGGTTTGTT +
Preference number: 5 (lower is better)
Translates to: PGQPLFPVEVEVPLYYPALEGWL*FPAGFV
Trigger: AACAAACCCTGCTGGAAACAACAACCAGCCTTCTAA...TGCTGGATAATACAGAGGAACTTCAACTTCTACAGGGAACAGTGGTTGGCCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp TCCAAGGCATGCTTCAGTTATACTGCAGCCTGGCCAACCACTGTTCCCTGTAGAATTTCTTGGCGTCTCTaGTACTGCTGCAAACATATA +
Preference number: 5 (lower is better)
Translates to: SKACFSYTAAWPTTVPCRISWRL*YCCKHI
Trigger: TATATGTTTGCAGCAGTACAAGAGACGCCAAGAAAT...TCTACAGGGAACAGTGGTTGGCCAGGCTGCAGTATAACTGAAGCATGCCTTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp CTGCAGCCTGGCCAACCACTGTTCCCTGTAGAAGTTGAAGTTCCTCTGTATTATTGTAGCATGTCCATCTaGTTTGGCCCTCAAATTCCA +
Preference number: 5 (lower is better)
Translates to: LQPGQPLFPVEVEVPLYYCSMSI*FGPQIP
Trigger: TGGAATTTGAGGGCCAAACAAGATGGACATGCTACA...ATAATACAGAGGAACTTCAACTTCTACAGGGAACAGTGGTTGGCCAGGCTGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp GCTGGACAGAGGTATGTGACATTCCTTTGCTTAACAAGCAAAACAAAATCAATGTCTTCTTCGCTCGTCTaGGCACAGAGGCTCTGTTCC +
Preference number: 5 (lower is better)
Translates to: AGQRYVTFLCLTSKTKSMSSSLV*AQRLCS
Trigger: GGAACAGAGCCTCTGTGCCAAGACGAGCGAAGAAGA...CATTGATTTTGTTTTGCTTGTTAAGCAAAGGAATGTCACATACCTCTGTCCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp TCCAAAGTGTTCAAAACTCACCCACTTCCTTACCAAAGACTGACTAAAAGGAATTCTTCTTCGCTCGTCTaGGCACAGAGGCTCTGTTCC +
Preference number: 5 (lower is better)
Translates to: SKVFKTHPLPYQRLTKRNSSSLV*AQRLCS
Trigger: GGAACAGAGCCTCTGTGCCAAGACGAGCGAAGAAGA...ATTCCTTTTAGTCAGTCTTTGGTAAGGAAGTGGGTGAGTTTTGAACACTTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424463.4
CDS-3UTR CAA 90 bp ACTTATGCTACCCAACCTAGAGCTTCCTACGAGGCATGGGGAAGAGATGAGAACTCAATCAGATCATTTTaGAACTCCAGTTCCTTGTCC +
Preference number: 5 (lower is better)
Translates to: TYATQPRASYEAWGRDENSIRSF*NSSSLS
Trigger: GGACAAGGAACTGGAGTTCAAAAATGATCTGATTGA...GTTCTCATCTCTTCCCCATGCCTCGTAGGAAGCTCTAGGTTGGGTAGCATAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424463.4
CDS-3UTR CAA 90 bp TACCCATTACTGGAAGGTGATTCAGAATCAAAAATCCCCACCACCAACAACCGGCACCACTATCTGAGCTaGCCACAGATGAAGTATCAT +
Preference number: 5 (lower is better)
Translates to: YPLLEGDSESKIPTTNNRHHYLS*PQMKYH
Trigger: ATGATACTTCATCTGTGGCAAGCTCAGATAGTGGTG...CCGGTTGTTGGTGGTGGGGATTTTTGATTCTGAATCACCTTCCAGTAATGGGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424463.4
CDS-3UTR CAA 90 bp CAACCACTGTTCCCTGTAGAAGTTGAAGTTCCTCTGTATTATCCAGCAGCTGGACACCACTATCTGAGCTaGCCACAGATGAAGTATCAT +
Preference number: 5 (lower is better)
Translates to: QPLFPVEVEVPLYYPAAGHHYLS*PQMKYH
Trigger: ATGATACTTCATCTGTGGCAAGCTCAGATAGTGGTG...TCCAGCTGCTGGATAATACAGAGGAACTTCAACTTCTACAGGGAACAGTGGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp TATTATCCAGCAGCTGGAGGAGACGGAGTATGGCAGACTCTGGAATGCCATTTGTTCTTCCTTTTTAAGTaGGTCCTGTCACCACTATCT +
Preference number: 5 (lower is better)
Translates to: YYPAAGGDGVWQTLECHLFFLFK*VLSPLS
Trigger: AGATAGTGGTGACAGGACCAACTTAAAAAGGAAGAA...CAAATGGCATTCCAGAGTCTGCCATACTCCGTCTCCTCCAGCTGCTGGATAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp TCCAAGGCATGCTTCAGTTATACTGCAGCCTGGCCAACCACTGTTCCCTGTAGAGATGAGCATCTGTTATaGATCTTAGAAGTTTTCCAC +
Preference number: 5 (lower is better)
Translates to: SKACFSYTAAWPTTVPCRDEHLL*ILEVFH
Trigger: GTGGAAAACTTCTAAGATCAATAACAGATGCTCATC...TCTACAGGGAACAGTGGTTGGCCAGGCTGCAGTATAACTGAAGCATGCCTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp AAGATCCTTTCGCTGCAGCAGAAGGCAGTAATCAACTATGACAGGCACCATATCCACTTGGATTTTTCCTaGGTCTGGGCACTTTTTCAG +
Preference number: 5 (lower is better)
Translates to: KILSLQQKAVINYDRHHIHLDFS*VWALFQ
Trigger: CTGAAAAAGTGCCCAGACCAAGGAAAAATCCAAGTG...GATATGGTGCCTGTCATAGTTGATTACTGCCTTCTGCTGCAGCGAAAGGATCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000421069.5
CDS-3UTR CAA 90 bp CAACCACTGTTCCCTGTAGAAGTTGAAGTTCCTCTGTATTATCCAGCAGCTGGATTTACAAACAAGGTGTaGTCAGGCTTTGCAAGCTGC +
Preference number: 5 (lower is better)
Translates to: QPLFPVEVEVPLYYPAAGFTNKV*SGFASC
Trigger: GCAGCTTGCAAAGCCTGACAACACCTTGTTTGTAAA...TCCAGCTGCTGGATAATACAGAGGAACTTCAACTTCTACAGGGAACAGTGGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp CCTGGCCAACCACTGTTCCCTGTAGAAGTTGAAGTTCCTCTGTATTATCCAGCACCTCAATATGATCCATaGCTTTCTGCCATACAGACT +
Preference number: 5 (lower is better)
Translates to: PGQPLFPVEVEVPLYYPAPQYDP*LSAIQT
Trigger: AGTCTGTATGGCAGAAAGCAATGGATCATATTGAGG...TGCTGGATAATACAGAGGAACTTCAACTTCTACAGGGAACAGTGGTTGGCCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp TCCTTTTTAAGTTGGTCCTGTCACCACTATCTGAGCTTGCCACAGATGAAGTATTTCAGTGAGCCATGTTaGCACCACTGTACTCCAACC +
Preference number: 5 (lower is better)
Translates to: SFLSWSCHHYLSLPQMKYFSEPC*HHCTPT
Trigger: GGTTGGAGTACAGTGGTGCAAACATGGCTCACTGAA...ATACTTCATCTGTGGCAAGCTCAGATAGTGGTGACAGGACCAACTTAAAAAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424721.5
CDS TCA 90 bp ACTTGTGAGGGGGTAAAGTCTGAATTCTCCACCATAACATTTATCTaGCATCTACTGGGTTACAGGCATTGTGCTGGATCTGTTCTAGGC +
Preference number: 5 (lower is better)
Translates to: TCEGVKSEFSTITFI*HLLGYRHCAGSVLG
Trigger: GCCTAGAACAGATCCAGCACAATGCCTGTAACCCAGTAGATGTCAGATAAATGTTATGGTGGAGAATTCAGACTTTACCCCCTCACAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452140.5
CDS GCA 90 bp ATCTCCACTGTCTCCAATTCCTCTTGTGTTTGCCGATCAATCACATaGAACTTCTCTACGCTGTCTAAGAGCACAACTGTGCGTGAATTT +
Preference number: 5 (lower is better)
Translates to: ISTVSNSSCVCRSIT*NFSTLSKSTTVREF
Trigger: AAATTCACGCACAGTTGTGCTCTTAGACAGCGTAGAGAAGTTGCATGTGATTGATCGGCAAACACAAGAGGAATTGGAGACAGTGGAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000465213.1
ENST00000625842.3
CDS-3UTR CAA 90 bp CTGCAGCCTGGCCAACCACTGTTCCCTGTAGAAGTTGAAGTTCCTCTGTATTATTGGAGGAGTATCAACTaGAGGAATATCAAACTCCTT +
Preference number: 5 (lower is better)
Translates to: LQPGQPLFPVEVEVPLYYWRSIN*RNIKLL
Trigger: AAGGAGTTTGATATTCCTCAAGTTGATACTCCTCCA...ATAATACAGAGGAACTTCAACTTCTACAGGGAACAGTGGTTGGCCAGGCTGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp CAACCACTGTTCCCTGTAGAAGTTGAAGTTCCTCTGTATTATCCAGCAGCTGGACAATTCCTCTTGTGTTaGCCGATCAATCACATGCAA +
Preference number: 5 (lower is better)
Translates to: QPLFPVEVEVPLYYPAAGQFLLC*PINHMQ
Trigger: TTGCATGTGATTGATCGGCAAACACAAGAGGAATTG...TCCAGCTGCTGGATAATACAGAGGAACTTCAACTTCTACAGGGAACAGTGGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp ATAGGTTTTAACATGAACACATTAAAGGGAGATGGCCCTGGCCCCCACAGTGTCTTCTGTAAGACAATCTaGTTTCAGGAGATGATCCAC +
Preference number: 5 (lower is better)
Translates to: IGFNMNTLKGDGPGPHSVFCKTI*FQEMIH
Trigger: GTGGATCATCTCCTGAAACAAGATTGTCTTACAGAA...GACACTGTGGGGGCCAGGGCCATCTCCCTTTAATGTGTTCATGTTAAAACCTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp AGAGTGTCGGGAGTCATCGTCAGGACTACAAAGGAATTCAAGGACCTGATCAAAATCCACAATTCGCTGTaGATATTCCACAGCTTGCTT +
Preference number: 5 (lower is better)
Translates to: RVSGVIVRTTKEFKDLIKIHNSL*IFHSLL
Trigger: AAGCAAGCTGTGGAATATCAACAGCGAATTGTGGAT...TTTGATCAGGTCCTTGAATTCCTTTGTAGTCCTGACGATGACTCCCGACACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452140.5
CDS-3UTR CAA 90 bp CCTGGCCAACCACTGTTCCCTGTAGAAGTTGAAGTTCCTCTGTATTATCCAGCAAACACGGAGCATTTATaGTTAGAAAGGGCAAGTCTT +
Preference number: 5 (lower is better)
Translates to: PGQPLFPVEVEVPLYYPANTEHL*LERASL
Trigger: AAGACTTGCCCTTTCTAACAATAAATGCTCCGTGTT...TGCTGGATAATACAGAGGAACTTCAACTTCTACAGGGAACAGTGGTTGGCCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS TCA 90 bp TTTGTCAAGGATGCCATGGCCAATAATGAAAACTGTGTGATGGGATaGTCTTTCAACTCAGGCTTAGAATGCAGAGGCTCAATACAGCAG +
Preference number: 5 (lower is better)
Translates to: FVKDAMANNENCVMG*SFNSGLECRGSIQQ
Trigger: CTGCTGTATTGAGCCTCTGCATTCTAAGCCTGAGTTGAAAGATCATCCCATCACACAGTTTTCATTATTGGCCATGGCATCCTTGACAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000465818.5
ENST00000625842.3
CDS CCA 90 bp CAAAGTGCCTCACGTTGCTGCTGGTTCAAATTATGTGAATTTCTCTaGCAAAGAGCAATGGTCTCCACCATAGTATCTTCAACATCCTTC +
Preference number: 5 (lower is better)
Translates to: QSASRCCWFKLCEFL*QRAMVSTIVSSTSF
Trigger: GAAGGATGTTGAAGATACTATGGTGGAGACCATTGCTCTTTGCCAGAGAAATTCACATAATTTGAACCAGCAGCAACGTGAGGCACTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000492449.5
ENST00000625842.3
CDS-3UTR CAA 90 bp TACCCATTACTGGAAGGTGATTCAGAATCAAAAATCCCCACCACCAACAACCGGTGGAGGAGTATCAACTaGAGGAATATCAAACTCCTT +
Preference number: 5 (lower is better)
Translates to: YPLLEGDSESKIPTTNNRWRSIN*RNIKLL
Trigger: AAGGAGTTTGATATTCCTCAAGTTGATACTCCTCCA...CCGGTTGTTGGTGGTGGGGATTTTTGATTCTGAATCACCTTCCAGTAATGGGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424463.4
CDS-3UTR CAA 90 bp TCCTTTTTAAGTTGGTCCTGTCACCACTATCTGAGCTTGCCACAGATGAAGTATCACCACTATCTGAGCTaGCCACAGATGAAGTATCAT +
Preference number: 5 (lower is better)
Translates to: SFLSWSCHHYLSLPQMKYHHYLS*PQMKYH
Trigger: ATGATACTTCATCTGTGGCAAGCTCAGATAGTGGTG...ATACTTCATCTGTGGCAAGCTCAGATAGTGGTGACAGGACCAACTTAAAAAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424721.5
CDS-3UTR CAA 90 bp CTGCAGCCTGGCCAACCACTGTTCCCTGTAGAAGTTGAAGTTCCTCTGTATTATGATGAGCATCTGTTATaGATCTTAGAAGTTTTCCAC +
Preference number: 5 (lower is better)
Translates to: LQPGQPLFPVEVEVPLYYDEHLL*ILEVFH
Trigger: GTGGAAAACTTCTAAGATCAATAACAGATGCTCATC...ATAATACAGAGGAACTTCAACTTCTACAGGGAACAGTGGTTGGCCAGGCTGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp TATATGGCTCAAGGCACTCCAAAAATACTCCTTTGGCCACTGAATTCTCACTTAATGCTGCTCCATCACTaGGATTTTTCCTTGGTCTGG +
Preference number: 5 (lower is better)
Translates to: YMAQGTPKILLWPLNSHLMLLHH*DFSLVW
Trigger: CCAGACCAAGGAAAAATCCAAGTGATGGAGCAGCAT...TAAGTGAGAATTCAGTGGCCAAAGGAGTATTTTTGGAGTGCCTTGAGCCATATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000421069.5
ENST00000458721.5
CDS-3UTR CAA 90 bp CTGCAGCCTGGCCAACCACTGTTCCCTGTAGAAGTTGAAGTTCCTCTGTATTATTATACAAGGAGCTTATaGCCCATAACAACTTGTTCA +
Preference number: 5 (lower is better)
Translates to: LQPGQPLFPVEVEVPLYYYTRSL*PITTCS
Trigger: TGAACAAGTTGTTATGGGCAATAAGCTCCTTGTATA...ATAATACAGAGGAACTTCAACTTCTACAGGGAACAGTGGTTGGCCAGGCTGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp CACCATAACATTTATCTGACATCTACTGGGTTACAGGCATTGTGCTGGATCTGTTTTACAAACAAGGTGTaGTCAGGCTTTGCAAGCTGC +
Preference number: 5 (lower is better)
Translates to: HHNIYLTSTGLQALCWICFTNKV*SGFASC
Trigger: GCAGCTTGCAAAGCCTGACAACACCTTGTTTGTAAA...ACAGATCCAGCACAATGCCTGTAACCCAGTAGATGTCAGATAAATGTTATGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452140.5
CDS-3UTR CAA 90 bp TCCAAAGTGTTCAAAACTCACCCACTTCCTTACCAAAGACTGACTAAAAGGAATTCAGAGTTGAATTTGTaGGCCTGCCTTCCTCTAGGC +
Preference number: 5 (lower is better)
Translates to: SKVFKTHPLPYQRLTKRNSELNL*ACLPLG
Trigger: GCCTAGAGGAAGGCAGGCCAACAAATTCAACTCTGA...ATTCCTTTTAGTCAGTCTTTGGTAAGGAAGTGGGTGAGTTTTGAACACTTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424463.4
CDS-3UTR CAA 90 bp TCCTTTTTAAGTTGGTCCTGTCACCACTATCTGAGCTTGCCACAGATGAAGTATAGACCCAGATCATTTTaGAACTCCAGTTCCTTGTCC +
Preference number: 5 (lower is better)
Translates to: SFLSWSCHHYLSLPQMKYRPRSF*NSSSLS
Trigger: GGACAAGGAACTGGAGTTCAAAAATGATCTGGGTCT...ATACTTCATCTGTGGCAAGCTCAGATAGTGGTGACAGGACCAACTTAAAAAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424721.5
CDS-3UTR CAA 90 bp TTCAAGGACCTGATCAAAAAGTGTTCTGTTTACAAACAAGGTGTTGTCAGGCTTACTGGGTTACAGGCATaGTGCTGGATCTGTTCTAGG +
Preference number: 5 (lower is better)
Translates to: FKDLIKKCSVYKQGVVRLTGLQA*CWICSR
Trigger: CCTAGAACAGATCCAGCACAATGCCTGTAACCCAGT...AAGCCTGACAACACCTTGTTTGTAAACAGAACACTTTTTGATCAGGTCCTTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452140.5
CDS-3UTR CAA 90 bp GCTGGACAGAGGTATGTGACATTCCTTTGCTTAACAAGCAAAACAAAATCAATGATGCTGCTCCATCACTaGGATTTTTCCTTGGTCTGG +
Preference number: 5 (lower is better)
Translates to: AGQRYVTFLCLTSKTKSMMLLHH*DFSLVW
Trigger: CCAGACCAAGGAAAAATCCAAGTGATGGAGCAGCAT...CATTGATTTTGTTTTGCTTGTTAAGCAAAGGAATGTCACATACCTCTGTCCAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp TCTAGGCTGGTGATATCCATATGTACAATGAGCGCTTCCACATTTTCCATTAATATGCTGCTCCATCACTaGGATTTTTCCTTGGTCTGG +
Preference number: 5 (lower is better)
Translates to: SRLVISICTMSASTFSINMLLHH*DFSLVW
Trigger: CCAGACCAAGGAAAAATCCAAGTGATGGAGCAGCAT...ATTAATGGAAAATGTGGAAGCGCTCATTGTACATATGGATATCACCAGCCTAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000421069.5
ENST00000458721.5
CDS-3UTR CAA 90 bp TATATGGCTCAAGGCACTCCAAAAATACTCCTTTGGCCACTGAATTCTCACTTACAAGTCTTTCATTACTaGGGGTGTGATTCCCACCAA +
Preference number: 5 (lower is better)
Translates to: YMAQGTPKILLWPLNSHLQVFHY*GCDSHQ
Trigger: TTGGTGGGAATCACACCCCAAGTAATGAAAGACTTG...TAAGTGAGAATTCAGTGGCCAAAGGAGTATTTTTGGAGTGCCTTGAGCCATATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000421069.5
ENST00000458721.5
CDS-3UTR CAA 90 bp CTAGGCTTCAGGGTAAATGGAAAAAGTCGCAATAGGCGAAATGTATTTCCTAAATCGACTCTCTTCAAATaGAACTATGCCTCCAGCCTG +
Preference number: 5 (lower is better)
Translates to: LGFRVNGKSRNRRNVFPKSTLFK*NYASSL
Trigger: CAGGCTGGAGGCATAGTTCAATTTGAAGAGAGTCGA...TTTAGGAAATACATTTCGCCTATTGCGACTTTTTCCATTTACCCTGAAGCCTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS TCA 90 bp GGCTCCTTCTGCAGCTTGATTATGGTGGTGTTACATGACTGTACATaGTTACCAACATTCACACTGCACACATATAATTGGCCAATTTTG +
Preference number: 5 (lower is better)
Translates to: GSFCSLIMVVLHDCT*LPTFTLHTYNWPIL
Trigger: CAAAATTGGCCAATTATATGTGTGCAGTGTGAATGTTGGTAATCATGTACAGTCATGTAACACCACCATAATCAAGCTGCAGAAGGAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495190.1
CDS-3UTR CAA 90 bp CCTGCTAGACAACAGCTAATATATACAAGGAGCTTATTGCCCATAACAACTTGTCAAGTCTTTCATTACTaGGGGTGTGATTCCCACCAA +
Preference number: 5 (lower is better)
Translates to: PARQQLIYTRSLLPITTCQVFHY*GCDSHQ
Trigger: TTGGTGGGAATCACACCCCAAGTAATGAAAGACTTG...ACAAGTTGTTATGGGCAATAAGCTCCTTGTATATATTAGCTGTTGTCTAGCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458721.5
CDS-3UTR CAA 90 bp TCAAAAACCTGGTTTTTAACCAAGGGAACCAGATCTTCAGGGATGTCACCAAGGTATACAAGGAGCTTATaGCCCATAACAACTTGTTCA +
Preference number: 5 (lower is better)
Translates to: SKTWFLTKGTRSSGMSPRYTRSL*PITTCS
Trigger: TGAACAAGTTGTTATGGGCAATAAGCTCCTTGTATA...CCTTGGTGACATCCCTGAAGATCTGGTTCCCTTGGTTAAAAACCAGGTTTTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000458721.5
CDS-3UTR CAA 90 bp GCTGGACAGAGGTATGTGACATTCCTTTGCTTAACAAGCAAAACAAAATCAATGGTAGCACTCAAGGACTaGCAGAGTCTCTATAACTTG +
Preference number: 5 (lower is better)
Translates to: AGQRYVTFLCLTSKTKSMVALKD*QSLYNL
Trigger: CAAGTTATAGAGACTCTGCAAGTCCTTGAGTGCTAC...CATTGATTTTGTTTTGCTTGTTAAGCAAAGGAATGTCACATACCTCTGTCCAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp ATGTATTTCCTAAAAAGCTGGACAGAGGTATGTGACATTCCTTTGCTTAACAAGCCAAAGTGCCTCACGTaGCTGCTGGTTCAAATTATG +
Preference number: 5 (lower is better)
Translates to: MYFLKSWTEVCDIPLLNKPKCLT*LLVQIM
Trigger: CATAATTTGAACCAGCAGCAACGTGAGGCACTTTGG...CTTGTTAAGCAAAGGAATGTCACATACCTCTGTCCAGCTTTTTAGGAAATACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp CTAGGCTTCAGGGTAAATGGAAAAAGTCGCAATAGGCGAAATGTATTTCCTAAAACTCTGGAATGCCATTaGTGTGAGTTCCACCTACTT +
Preference number: 5 (lower is better)
Translates to: LGFRVNGKSRNRRNVFPKTLECH*CEFHLL
Trigger: AAGTAGGTGGAACTCACACAAATGGCATTCCAGAGT...TTTAGGAAATACATTTCGCCTATTGCGACTTTTTCCATTTACCCTGAAGCCTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS TCA 90 bp GGATCATCTGTAAACTTGATATGCAATATTGCTGTTCCTGGAGGATaGGCATCTGTTATTGATCTTAGAAGTTTTCCACTGGCCAAATCC +
Preference number: 5 (lower is better)
Translates to: GSSVNLICNIAVPGG*ASVIDLRSFPLAKS
Trigger: GGATTTGGCCAGTGGAAAACTTCTAAGATCAATAACAGATGCTCATCCTCCAGGAACAGCAATATTGCATATCAAGTTTACAGATGATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000452666.3
ENST00000465818.5
ENST00000469713.1
ENST00000625842.3
CDS GCA 90 bp CTCCACCATAACATTTATCTGACATCTACTGGGTTACAGGCATTGTaGTGGATCTGTTCTAGGCATGTTTCAACAAAATATCCACAATTC +
Preference number: 5 (lower is better)
Translates to: LHHNIYLTSTGLQAL*WICSRHVSTKYPQF
Trigger: GAATTGTGGATATTTTGTTGAAACATGCCTAGAACAGATCCAGCACAATGCCTGTAACCCAGTAGATGTCAGATAAATGTTATGGTGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452140.5
CDS-3UTR CAA 90 bp TGTTGGAGGAGTATCAACTTGAGGAATATCAAACTCCTTGTCATCAATCTGTGGTGGAGGAGTATCAACTaGAGGAATATCAAACTCCTT +
Preference number: 5 (lower is better)
Translates to: CWRSINLRNIKLLVINLWWRSIN*RNIKLL
Trigger: AAGGAGTTTGATATTCCTCAAGTTGATACTCCTCCA...CCACAGATTGATGACAAGGAGTTTGATATTCCTCAAGTTGATACTCCTCCAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424721.5
CDS-3UTR CAA 90 bp TGTTGGAGGAGTATCAACTTGAGGAATATCAAACTCCTTGTCATCAATCTGTGGTTCTTCCTTTTTAAGTaGGTCCTGTCACCACTATCT +
Preference number: 5 (lower is better)
Translates to: CWRSINLRNIKLLVINLWFFLFK*VLSPLS
Trigger: AGATAGTGGTGACAGGACCAACTTAAAAAGGAAGAA...CCACAGATTGATGACAAGGAGTTTGATATTCCTCAAGTTGATACTCCTCCAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424721.5
CDS-3UTR CAA 90 bp CTAGGCTTCAGGGTAAATGGAAAAAGTCGCAATAGGCGAAATGTATTTCCTAAAGGGATTCACGTAATTTaGTACTGCTACAAAGTGCCA +
Preference number: 5 (lower is better)
Translates to: LGFRVNGKSRNRRNVFPKGIHVI*YCYKVP
Trigger: TGGCACTTTGTAGCAGTACAAAATTACGTGAATCCC...TTTAGGAAATACATTTCGCCTATTGCGACTTTTTCCATTTACCCTGAAGCCTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp CTAGGCTTCAGGGTAAATGGAAAAAGTCGCAATAGGCGAAATGTATTTCCTAAAATAGCTACTGATGGATaGATAACAAGCCTTCTCTCC +
Preference number: 5 (lower is better)
Translates to: LGFRVNGKSRNRRNVFPKIATDG*ITSLLS
Trigger: GGAGAGAAGGCTTGTTATCAATCCATCAGTAGCTAT...TTTAGGAAATACATTTCGCCTATTGCGACTTTTTCCATTTACCCTGAAGCCTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp AGGCTGGTGATATCCATATGTACAATGAGCGCTTCCACATTTTCCATTAATTTTCACTTGGATTTTTCCTaGGTCTGGGCACTTTTTCAG +
Preference number: 5 (lower is better)
Translates to: RLVISICTMSASTFSINFHLDFS*VWALFQ
Trigger: CTGAAAAAGTGCCCAGACCAAGGAAAAATCCAAGTG...AAAATTAATGGAAAATGTGGAAGCGCTCATTGTACATATGGATATCACCAGCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000421069.5
ENST00000458721.5
CDS-3UTR CAA 90 bp GCTGGACAGAGGTATGTGACATTCCTTTGCTTAACAAGCAAAACAAAATCAATGTCAATCAGATCATTTTaGAACTCCAGTTCCTTGTCC +
Preference number: 5 (lower is better)
Translates to: AGQRYVTFLCLTSKTKSMSIRSF*NSSSLS
Trigger: GGACAAGGAACTGGAGTTCAAAAATGATCTGATTGA...CATTGATTTTGTTTTGCTTGTTAAGCAAAGGAATGTCACATACCTCTGTCCAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp TCCAAAGTGTTCAAAACTCACCCACTTCCTTACCAAAGACTGACTAAAAGGAATTTCTTCCTTTTTAAGTaGGTCCTGTCACCACTATCT +
Preference number: 5 (lower is better)
Translates to: SKVFKTHPLPYQRLTKRNFFLFK*VLSPLS
Trigger: AGATAGTGGTGACAGGACCAACTTAAAAAGGAAGAA...ATTCCTTTTAGTCAGTCTTTGGTAAGGAAGTGGGTGAGTTTTGAACACTTTGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000424463.4
CDS-3UTR CAA 90 bp ATGTATTTCCTAAAAAGCTGGACAGAGGTATGTGACATTCCTTTGCTTAACAAGCAATTCCTCTTGTGTTaGCCGATCAATCACATGCAA +
Preference number: 5 (lower is better)
Translates to: MYFLKSWTEVCDIPLLNKQFLLC*PINHMQ
Trigger: TTGCATGTGATTGATCGGCAAACACAAGAGGAATTG...CTTGTTAAGCAAAGGAATGTCACATACCTCTGTCCAGCTTTTTAGGAAATACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp CTAGGCTTCAGGGTAAATGGAAAAAGTCGCAATAGGCGAAATGTATTTCCTAAAATTTCTTGGCGTCTCTaGTACTGCTGCAAACATATA +
Preference number: 5 (lower is better)
Translates to: LGFRVNGKSRNRRNVFPKISWRL*YCCKHI
Trigger: TATATGTTTGCAGCAGTACAAGAGACGCCAAGAAAT...TTTAGGAAATACATTTCGCCTATTGCGACTTTTTCCATTTACCCTGAAGCCTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp TCCAAAGTGTTCAAAACTCACCCACTTCCTTACCAAAGACTGACTAAAAGGAATAAGAAGCAAATTTACTaGGGCAGGGTAGTACTACAA +
Preference number: 5 (lower is better)
Translates to: SKVFKTHPLPYQRLTKRNKKQIY*GRVVLQ
Trigger: TTGTAGTACTACCCTGCCCAAGTAAATTTGCTTCTT...ATTCCTTTTAGTCAGTCTTTGGTAAGGAAGTGGGTGAGTTTTGAACACTTTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424463.4
CDS GCA 90 bp CTTAAATGTCAATTCAAAAACAGAGCCTCCGCTGTCGTTGCAAATTaGAAGAGTTGGATCATCTGTAAACTTGATATGCAATATTGCTGT +
Preference number: 5 (lower is better)
Translates to: LKCQFKNRASAVVAN*KSWIICKLDMQYCC
Trigger: ACAGCAATATTGCATATCAAGTTTACAGATGATCCAACTCTTGCAATTTGCAACGACAGCGGAGGCTCTGTTTTTGAATTGACATTTAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000465818.5
ENST00000469713.1
ENST00000625842.3
CDS-3UTR CAA 90 bp ATGTATTTCCTAAAAAGCTGGACAGAGGTATGTGACATTCCTTTGCTTAACAAGTTCTTCCTTTTTAAGTaGGTCCTGTCACCACTATCT +
Preference number: 5 (lower is better)
Translates to: MYFLKSWTEVCDIPLLNKFFLFK*VLSPLS
Trigger: AGATAGTGGTGACAGGACCAACTTAAAAAGGAAGAA...CTTGTTAAGCAAAGGAATGTCACATACCTCTGTCCAGCTTTTTAGGAAATACAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp ATGTATTTCCTAAAAAGCTGGACAGAGGTATGTGACATTCCTTTGCTTAACAAGTTCTGTAAGACAATCTaGTTTCAGGAGATGATCCAC +
Preference number: 5 (lower is better)
Translates to: MYFLKSWTEVCDIPLLNKFCKTI*FQEMIH
Trigger: GTGGATCATCTCCTGAAACAAGATTGTCTTACAGAA...CTTGTTAAGCAAAGGAATGTCACATACCTCTGTCCAGCTTTTTAGGAAATACAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS-3UTR CAA 90 bp ATGTATTTCCTAAAAAGCTGGACAGAGGTATGTGACATTCCTTTGCTTAACAAGTGTTTCCAGCAGGGTTaGTTCATAGTTAAAGGTATC +
Preference number: 5 (lower is better)
Translates to: MYFLKSWTEVCDIPLLNKCFQQG*FIVKGI
Trigger: GATACCTTTAACTATGAACAAACCCTGCTGGAAACA...CTTGTTAAGCAAAGGAATGTCACATACCTCTGTCCAGCTTTTTAGGAAATACAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS TCA 90 bp TCAGTCTCATTTAGTATGCTTTCCAGTGTTGGAGGAGTATCAACTTaGGGAATATCAAACTCCTTGTCATCAATCAGATCATTTTTGAAC +
Preference number: 5 (lower is better)
Translates to: SVSFSMLSSVGGVST*GISNSLSSIRSFLN
Trigger: GTTCAAAAATGATCTGATTGATGACAAGGAGTTTGATATTCCTCAAGTTGATACTCCTCCAACACTGGAAAGCATACTAAATGAGACTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287546.8
ENST00000422105.5
ENST00000424463.4
ENST00000436792.6
ENST00000441141.5
ENST00000445089.5
ENST00000446204.6
ENST00000625842.3
CDS TCA 90 bp GCCTTGTGTACGCTGAAATATATTCCCTTTTCTTCTTCACATAACTaGCTGATGCAGGTAAATTCTTGTAAGTTAAATGCGCAAAAGACA +
Preference number: 5 (lower is better)
Translates to: ALCTLKYIPFSSSHN*LMQVNSCKLNAQKT
Trigger: TGTCTTTTGCGCATTTAACTTACAAGAATTTACCTGCATCAGTCAGTTATGTGAAGAAGAAAAGGGAATATATTTCAGCGTACACAAGGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485024.1
CDS-3UTR CAA 90 bp ATGTATTTCCTAAAAAGCTGGACAGAGGTATGTGACATTCCTTTGCTTAACAAGTTTGGTATTTTCACCTaGATGTGTTACCTCTTGAAG +
Preference number: 5 (lower is better)
Translates to: MYFLKSWTEVCDIPLLNKFGIFT*MCYLLK
Trigger: CTTCAAGAGGTAACACATCAAGGTGAAAATACCAAA...CTTGTTAAGCAAAGGAATGTCACATACCTCTGTCCAGCTTTTTAGGAAATACAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS GCA 72 bp GTCGGGGGAGCGGGCGCGCCAGTCCCTCAGCCTAATTaGCGCACGACTGTAACAGGACAGAATGAGGCTTGC +
Preference number: 6 (lower is better)
Translates to: VGGAGAPVPQPN*RTTVTGQNEAC
Trigger: GCAAGCCTCATTCTGTCCTGTTACAGTCGTGCGGCAATTAGGCTGAGGGACTGGCGCGCCCGCTCCCCCGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000453056.5
ENST00000471655.1
ENST00000475580.5
CDS TCA 72 bp TATAGCTCTCGCTGCTGCGATTCTGGGAGAGTTCCGTaGGGAGAGCCAGCCTGGAGCTTCCTCGGTAGAGAC +
Preference number: 6 (lower is better)
Translates to: YSSRCCDSGRVP*GEPAWSFLGRD
Trigger: GTCTCTACCGAGGAAGCTCCAGGCTGGCTCTCCTCACGGAACTCTCCCAGAATCGCAGCAGCGAGAGCTATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000492449.5
ENST00000625842.3
CDS CAA 90 bp GTAGATGAGGAATGGCTGAACTGGACAGCTTCTGAGGGGCCATCATaGCCTCCAATAACGGAAACCAAAGTGCCTCACGTTGCTGCTGGT +
Preference number: 6 (lower is better)
Translates to: VDEEWLNWTASEGPS*PPITETKVPHVAAG
Trigger: ACCAGCAGCAACGTGAGGCACTTTGGTTTCCGTTATTGGAGGCAATGATGGCCCCTCAGAAGCTGTCCAGTTCAGCCATTCCTCATCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000492449.5
ENST00000625842.3
CDS GCA 72 bp GCAGAAGGCAAGCATGGGATTCACGTAATTTTGTACTaGTACAAAGTGCCAGGCCAGCAGTGGCACACTGGA +
Preference number: 6 (lower is better)
Translates to: AEGKHGIHVILY*YKVPGQQWHTG
Trigger: TCCAGTGTGCCACTGCTGGCCTGGCACTTTGTAGCAGTACAAAATTACGTGAATCCCATGCTTGCCTTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS CAA 72 bp TCCTCTGCAGAAGGCAAGCATGGGATTCACGTAATTTaGTACTGCTACAAAGTGCCAGGCCAGCAGTGGCAC +
Preference number: 6 (lower is better)
Translates to: SSAEGKHGIHVI*YCYKVPGQQWH
Trigger: GTGCCACTGCTGGCCTGGCACTTTGTAGCAGTACAAAATTACGTGAATCCCATGCTTGCCTTCTGCAGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS CAA 72 bp GAATGGCTGAACTGGACAGCTTCTGAGGGGCCATCATaGCCTCCAATAACGGAAACCAAAGTGCCTCACGTT +
Preference number: 6 (lower is better)
Translates to: EWLNWTASEGPS*PPITETKVPHV
Trigger: AACGTGAGGCACTTTGGTTTCCGTTATTGGAGGCAATGATGGCCCCTCAGAAGCTGTCCAGTTCAGCCATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000492449.5
ENST00000625842.3
CDS CAA 90 bp AACAACATCTCCTCTGCAGAAGGCAAGCATGGGATTCACGTAATTTaGTACTGCTACAAAGTGCCAGGCCAGCAGTGGCACACTGGAAGG +
Preference number: 6 (lower is better)
Translates to: NNISSAEGKHGIHVI*YCYKVPGQQWHTGR
Trigger: CCTTCCAGTGTGCCACTGCTGGCCTGGCACTTTGTAGCAGTACAAAATTACGTGAATCCCATGCTTGCCTTCTGCAGAGGAGATGTTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS CCA 72 bp TCAGAGCTTCAGAGTGTAGATGAGGAATGGCTGAACTaGACAGCTTCTGAGGGGCCATCATTGCCTCCAATA +
Preference number: 6 (lower is better)
Translates to: SELQSVDEEWLN*TASEGPSLPPI
Trigger: TATTGGAGGCAATGATGGCCCCTCAGAAGCTGTCCAGTTCAGCCATTCCTCATCTACACTCTGAAGCTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000488255.1
ENST00000492449.5
ENST00000625842.3
CDS GCA 72 bp AGGCTTCAGGGACACGAGTTCCTCAATATGATCCATTaGTTTCTGCCATACAGACTGCTTCTCCTCTGCACT +
Preference number: 6 (lower is better)
Translates to: RLQGHEFLNMIH*FLPYRLLLLCT
Trigger: AGTGCAGAGGAGAAGCAGTCTGTATGGCAGAAAGCAATGGATCATATTGAGGAACTCGTGTCCCTGAAGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000492449.5
ENST00000625842.3
CDS GCA 72 bp AGTCATCAATCCTCAGTCACAGGTGGAGGAATGAGCTaGAGCTGGAAGTTCTCATTCTGGAAGATGCTGTTG +
Preference number: 6 (lower is better)
Translates to: SHQSSVTGGGMS*SWKFSFWKMLL
Trigger: CAACAGCATCTTCCAGAATGAGAACTTCCAGCTGCAGCTCATTCCTCCACCTGTGACTGAGGATTGATGACT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000492449.5
ENST00000625842.3
CDS CAA 72 bp AAGGCTTCAGGGACACGAGTTCCTCAATATGATCCATaGCTTTCTGCCATACAGACTGCTTCTCCTCTGCAC +
Preference number: 6 (lower is better)
Translates to: KASGTRVPQYDP*LSAIQTASPLH
Trigger: GTGCAGAGGAGAAGCAGTCTGTATGGCAGAAAGCAATGGATCATATTGAGGAACTCGTGTCCCTGAAGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000492449.5
ENST00000625842.3
CDS CAA 72 bp GAATGGCTGAACTGGACAGCTTCTGAGGGGCCATCATaGCCTCCAATAACGGAAACCAAAGTGCCTATAATG +
Preference number: 6 (lower is better)
Translates to: EWLNWTASEGPS*PPITETKVPIM
Trigger: CATTATAGGCACTTTGGTTTCCGTTATTGGAGGCAATGATGGCCCCTCAGAAGCTGTCCAGTTCAGCCATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488255.1
CDS CAA 90 bp AACTCAGGCTTAGAATGCAGAGGCTCAATACAGCAGACTTCACCCTaGGAACCACTGAACAGACATCTAGATTCACAGGTTCTCACTCCC +
Preference number: 6 (lower is better)
Translates to: NSGLECRGSIQQTSP*EPLNRHLDSQVLTP
Trigger: GGGAGTGAGAACCTGTGAATCTAGATGTCTGTTCAGTGGTTCCAAGGGTGAAGTCTGCTGTATTGAGCCTCTGCATTCTAAGCCTGAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000465818.5
ENST00000625842.3
CDS CAA 90 bp TTCTTCCAGACGGTAGCACTCAAGGACTTGCAGAGTCTCTATAACTaGGGTTGGGTTGAACTGACACAACAGCTCAATGAACTGCTCTGT +
Preference number: 6 (lower is better)
Translates to: FFQTVALKDLQSLYN*GWVELTQQLNELLC
Trigger: ACAGAGCAGTTCATTGAGCTGTTGTGTCAGTTCAACCCAACCCAAGTTATAGAGACTCTGCAAGTCCTTGAGTGCTACCGTCTGGAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000492449.5
ENST00000625842.3
CDS CAA 90 bp GTAGATGAGGAATGGCTGAACTGGACAGCTTCTGAGGGGCCATCATaGCCTCCAATAACGGAAACCAAAGTGCCTATAATGTCAGAGAAA +
Preference number: 6 (lower is better)
Translates to: VDEEWLNWTASEGPS*PPITETKVPIMSEK
Trigger: TTTCTCTGACATTATAGGCACTTTGGTTTCCGTTATTGGAGGCAATGATGGCCCCTCAGAAGCTGTCCAGTTCAGCCATTCCTCATCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488255.1
CDS TCA 72 bp GATCCTTTCGCTGCAGCAGAAGGCAGTAATCAACTATaGCAGGCACCATATCCTCATGACCAAGTGAGGTTT +
Preference number: 6 (lower is better)
Translates to: DPFAAAEGSNQL*QAPYPHDQVRF
Trigger: AAACCTCACTTGGTCATGAGGATATGGTGCCTGTCATAGTTGATTACTGCCTTCTGCTGCAGCGAAAGGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421069.5
CDS CCA 72 bp GCACTCAAGGACTTGCAGAGTCTCTATAACTTGGGTTaGGTTGAACTGACACAACAGCTCAATGAACTGCTC +
Preference number: 6 (lower is better)
Translates to: ALKDLQSLYNLG*VELTQQLNELL
Trigger: GAGCAGTTCATTGAGCTGTTGTGTCAGTTCAACCCAACCCAAGTTATAGAGACTCTGCAAGTCCTTGAGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000492449.5
ENST00000625842.3
CDS CCA 72 bp CTGGTGACCGAAGCTCTCAGGTTACACAATGACCAATaGAGATCTTGGTTTAGAAGGCTGGTTGTTGTTTCC +
Preference number: 6 (lower is better)
Translates to: LVTEALRLHNDQ*RSWFRRLVVVS
Trigger: GGAAACAACAACCAGCCTTCTAAACCAAGATCTCCATTGGTCATTGTGTAACCTGAGAGCTTCGGTCACCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000488255.1
ENST00000492449.5
ENST00000625842.3
CDS CCA 72 bp CCATTTGAATTTTCACATTCATTTGGAACCAGTAAGTaGAAATTGCCCGACCCAGTTCCGGGCCAACGTACG +
Preference number: 6 (lower is better)
Translates to: PFEFSHSFGTSK*KLPDPVPGQRT
Trigger: CGTACGTTGGCCCGGAACTGGGTCGGGCAATTTCCACTTACTGGTTCCAAATGAATGTGAAAATTCAAATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453056.5
CDS CAA 90 bp TTCTTGGCGTCTCTTGTACTGCTGCAAACATATAGAGCAGTAATCTaGTTTGGGATTCAGTCCTCTGGTGACCGAAGCTCTCAGGTTACA +
Preference number: 6 (lower is better)
Translates to: FLASLVLLQTYRAVI*FGIQSSGDRSSQVT
Trigger: TGTAACCTGAGAGCTTCGGTCACCAGAGGACTGAATCCCAAACAAGATTACTGCTCTATATGTTTGCAGCAGTACAAGAGACGCCAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000488255.1
ENST00000492449.5
ENST00000625842.3
CDS TCA 72 bp TTTTCTGCCATCCGGATGAGTCGACTCTCTTCAAATTaGACTATGCCTCCAGCCTGCAGCAATTCTAAAAGG +
Preference number: 6 (lower is better)
Translates to: FSAIRMSRLSSN*TMPPACSNSKR
Trigger: CCTTTTAGAATTGCTGCAGGCTGGAGGCATAGTTCAATTTGAAGAGAGTCGACTCATCCGGATGGCAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000463687.1
ENST00000492449.5
ENST00000625842.3
CDS GCA 72 bp GTCTCCAATTCCTCTTGTGTTTGCCGATCAATCACATaGAACTTCTCTACGCTGTCTAAGAGCACAACTGTG +
Preference number: 6 (lower is better)
Translates to: VSNSSCVCRSIT*NFSTLSKSTTV
Trigger: CACAGTTGTGCTCTTAGACAGCGTAGAGAAGTTGCATGTGATTGATCGGCAAACACAAGAGGAATTGGAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000465213.1
ENST00000625842.3
CDS GCA 72 bp TCTGAGATCTCCACTGTCTCCAATTCCTCTTGTGTTTaGCGATCAATCACATGCAACTTCTCTACGCTGTCT +
Preference number: 6 (lower is better)
Translates to: SEISTVSNSSCV*RSITCNFSTLS
Trigger: AGACAGCGTAGAGAAGTTGCATGTGATTGATCGGCAAACACAAGAGGAATTGGAGACAGTGGAGATCTCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000465213.1
ENST00000625842.3
CDS CCA 72 bp GAAGCTCTCAGGTTACACAATGACCAATGGAGATCTTaGTTTAGAAGGCTGGTTGTTGTTTCCAGCAGGGTT +
Preference number: 6 (lower is better)
Translates to: EALRLHNDQWRS*FRRLVVVSSRV
Trigger: AACCCTGCTGGAAACAACAACCAGCCTTCTAAACCAAGATCTCCATTGGTCATTGTGTAACCTGAGAGCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000488255.1
ENST00000492449.5
ENST00000625842.3
CDS CCA 72 bp ACAAAAACATCAAGGAAGCTCCTGAAAGGACTAGGATaGGGTTTTGACTCATCTGAAGTCTTTCGCTGCAGC +
Preference number: 6 (lower is better)
Translates to: TKTSRKLLKGLG*GFDSSEVFRCS
Trigger: GCTGCAGCGAAAGACTTCAGATGAGTCAAAACCCCATCCTAGTCCTTTCAGGAGCTTCCTTGATGTTTTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458721.5
CDS CAA 72 bp ACGGTAGCACTCAAGGACTTGCAGAGTCTCTATAACTaGGGTTGGGTTGAACTGACACAACAGCTCAATGAA +
Preference number: 6 (lower is better)
Translates to: TVALKDLQSLYN*GWVELTQQLNE
Trigger: TTCATTGAGCTGTTGTGTCAGTTCAACCCAACCCAAGTTATAGAGACTCTGCAAGTCCTTGAGTGCTACCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000492449.5
ENST00000625842.3
CDS CAA 90 bp CTGAGTAATCTGAATAGTTTCTTCCAGACGGTAGCACTCAAGGACTaGCAGAGTCTCTATAACTTGGGTTGGGTTGAACTGACACAACAG +
Preference number: 6 (lower is better)
Translates to: LSNLNSFFQTVALKD*QSLYNLGWVELTQQ
Trigger: CTGTTGTGTCAGTTCAACCCAACCCAAGTTATAGAGACTCTGCAAGTCCTTGAGTGCTACCGTCTGGAAGAAACTATTCAGATTACTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000492449.5
ENST00000625842.3
CDS TCA 72 bp GATGCCATGGCCAATAATGAAAACTGTGTGATGGGATaGTCTTTCAACTCAGGCTTAGAATGCAGAGGCTCA +
Preference number: 6 (lower is better)
Translates to: DAMANNENCVMG*SFNSGLECRGS
Trigger: TGAGCCTCTGCATTCTAAGCCTGAGTTGAAAGATCATCCCATCACACAGTTTTCATTATTGGCCATGGCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000465818.5
ENST00000625842.3
CDS CAA 72 bp AGATTGAAAGACTTATTCAGCTCTTCTTCGCTCGTCTaGGCACAGAGGCTCTGTTCCACATTTTCATGGTCT +
Preference number: 6 (lower is better)
Translates to: RLKDLFSSSSLV*AQRLCSTFSWS
Trigger: AGACCATGAAAATGTGGAACAGAGCCTCTGTGCCAAGACGAGCGAAGAAGAGCTGAATAAGTCTTTCAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000287546.8
ENST00000422105.5
ENST00000424463.4
ENST00000424721.5
ENST00000436792.6
ENST00000441141.5
ENST00000445089.5
ENST00000446204.6
ENST00000453056.5
ENST00000625842.3
ENST00000628962.1
CDS CAA 72 bp TTAGAATGCAGAGGCTCAATACAGCAGACTTCACCCTaGGAACCACTGAACAGACATCTAGATTCACAGGTT +
Preference number: 6 (lower is better)
Translates to: LECRGSIQQTSP*EPLNRHLDSQV
Trigger: AACCTGTGAATCTAGATGTCTGTTCAGTGGTTCCAAGGGTGAAGTCTGCTGTATTGAGCCTCTGCATTCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000465818.5
ENST00000625842.3
CDS CAA 72 bp TCTCTTGTACTGCTGCAAACATATAGAGCAGTAATCTaGTTTGGGATTCAGTCCTCTGGTGACCGAAGCTCT +
Preference number: 6 (lower is better)
Translates to: SLVLLQTYRAVI*FGIQSSGDRSS
Trigger: AGAGCTTCGGTCACCAGAGGACTGAATCCCAAACAAGATTACTGCTCTATATGTTTGCAGCAGTACAAGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000488255.1
ENST00000492449.5
ENST00000625842.3
CDS CAA 90 bp GAAGCTTCTAGATTGAAAGACTTATTCAGCTCTTCTTCGCTCGTCTaGGCACAGAGGCTCTGTTCCACATTTTCATGGTCTGGTTCATTT +
Preference number: 6 (lower is better)
Translates to: EASRLKDLFSSSSLV*AQRLCSTFSWSGSF
Trigger: AAATGAACCAGACCATGAAAATGTGGAACAGAGCCTCTGTGCCAAGACGAGCGAAGAAGAGCTGAATAAGTCTTTCAATCTAGAAGCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000287546.8
ENST00000422105.5
ENST00000424463.4
ENST00000424721.5
ENST00000436792.6
ENST00000441141.5
ENST00000445089.5
ENST00000446204.6
ENST00000453056.5
ENST00000625842.3
ENST00000628962.1
CDS TCA 72 bp TTTGAAATGGCTGCTATTGTAGACCAGCTGAACTTCTaGGATCTCCACTGTCTCCAATTCCTCTTGTGTTTG +
Preference number: 6 (lower is better)
Translates to: FEMAAIVDQLNF*DLHCLQFLLCL
Trigger: CAAACACAAGAGGAATTGGAGACAGTGGAGATCTCAGAAGTTCAGCTGGTCTACAATAGCAGCCATTTCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000465213.1
ENST00000625842.3
CDS TCA 72 bp ACTTGCAGAGTCTCTATAACTTGGGTTGGGTTGAACTaGCACAACAGCTCAATGAACTGCTCTGTGATACAA +
Preference number: 6 (lower is better)
Translates to: TCRVSITWVGLN*HNSSMNCSVIQ
Trigger: TTGTATCACAGAGCAGTTCATTGAGCTGTTGTGTCAGTTCAACCCAACCCAAGTTATAGAGACTCTGCAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000492449.5
ENST00000625842.3
CDS CCA 72 bp GAAAATGAACAACATCTCCTCTGCAGAAGGCAAGCATaGGATTCACGTAATTTTGTACTGCTACAAAGTGCC +
Preference number: 6 (lower is better)
Translates to: ENEQHLLCRRQA*DSRNFVLLQSA
Trigger: GGCACTTTGTAGCAGTACAAAATTACGTGAATCCCATGCTTGCCTTCTGCAGAGGAGATGTTGTTCATTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000625842.3
CDS CAA 72 bp CAAATAAAAGATCTGACCACCATAGCTACTGATGGATaGATAACAAGCCTTCTCTCCAACCAAAGCCAGTGC +
Preference number: 6 (lower is better)
Translates to: QIKDLTTIATDG*ITSLLSNQSQC
Trigger: GCACTGGCTTTGGTTGGAGAGAAGGCTTGTTATCAATCCATCAGTAGCTATGGTGGTCAGATCTTTTATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000465213.1
ENST00000625842.3
CDS TCA 72 bp TTGTCCCCAAATAAAAGATCTGACCACCATAGCTACTaGTGGATTGATAACAAGCCTTCTCTCCAACCAAAG +
Preference number: 6 (lower is better)
Translates to: LSPNKRSDHHSY*WIDNKPSLQPK
Trigger: CTTTGGTTGGAGAGAAGGCTTGTTATCAATCCATCAGTAGCTATGGTGGTCAGATCTTTTATTTGGGGACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000465213.1
ENST00000625842.3
CDS CCA 72 bp AACAGAGCCTCCGCTGTCGTTGCAAATTGCAAGAGTTaGATCATCTGTAAACTTGATATGCAATATTGCTGT +
Preference number: 6 (lower is better)
Translates to: NRASAVVANCKS*IICKLDMQYCC
Trigger: ACAGCAATATTGCATATCAAGTTTACAGATGATCCAACTCTTGCAATTTGCAACGACAGCGGAGGCTCTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000465818.5
ENST00000469713.1
ENST00000625842.3
CDS CCA 72 bp CCACAGCTAAAGACAATTATTTCATCAGCCATTTCTTaGCGTCTCTTGTACTGCTGCAAACATATAGAGCAG +
Preference number: 6 (lower is better)
Translates to: PQLKTIISSAIS*RLLYCCKHIEQ
Trigger: CTGCTCTATATGTTTGCAGCAGTACAAGAGACGCCAAGAAATGGCTGATGAAATAATTGTCTTTAGCTGTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000492449.5
ENST00000625842.3
CDS TCA 72 bp AAAAACCAATCATTACGATATGCCATGCCAATAGCCTaGAAATGCTGCTCCATCACTTGGATTTTTCCTTGG +
Preference number: 6 (lower is better)
Translates to: KNQSLRYAMPIA*KCCSITWIFPW
Trigger: CCAAGGAAAAATCCAAGTGATGGAGCAGCATTTTCAGGCTATTGGCATGGCATATCGTAATGATTGGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000421069.5
CDS CAA 72 bp CTTTGTTACTTGAACTGCATTTGTAGCATGTCCATCTaGTTTGGCCCTCAAATTCCACAGTGCATTCTTTGT +
Preference number: 6 (lower is better)
Translates to: LCYLNCICSMSI*FGPQIPQCILC
Trigger: ACAAAGAATGCACTGTGGAATTTGAGGGCCAAACAAGATGGACATGCTACAAATGCAGTTCAAGTAACAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000492449.5
ENST00000625842.3
CDS CAA 90 bp ATACAAATGGCCACAGCTAAAGACAATTATTTCATCAGCCATTTCTaGGCGTCTCTTGTACTGCTGCAAACATATAGAGCAGTAATCTTG +
Preference number: 6 (lower is better)
Translates to: IQMATAKDNYFISHF*ASLVLLQTYRAVIL
Trigger: CAAGATTACTGCTCTATATGTTTGCAGCAGTACAAGAGACGCCAAGAAATGGCTGATGAAATAATTGTCTTTAGCTGTGGCCATTTGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000492449.5
ENST00000625842.3
CDS CAA 72 bp TTAAATGTCAATTCAAAAACAGAGCCTCCGCTGTCGTaGCAAATTGCAAGAGTTGGATCATCTGTAAACTTG +
Preference number: 6 (lower is better)
Translates to: LNVNSKTEPPLS*QIARVGSSVNL
Trigger: CAAGTTTACAGATGATCCAACTCTTGCAATTTGCAACGACAGCGGAGGCTCTGTTTTTGAATTGACATTTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000465818.5
ENST00000469713.1
ENST00000625842.3
CDS CAA 72 bp CATAACATTTATCTGACATCTACTGGGTTACAGGCATaGTGCTGGATCTGTTCTAGGCATGTTTCAACAAAA +
Preference number: 6 (lower is better)
Translates to: HNIYLTSTGLQA*CWICSRHVSTK
Trigger: TTTTGTTGAAACATGCCTAGAACAGATCCAGCACAATGCCTGTAACCCAGTAGATGTCAGATAAATGTTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452140.5
CDS CAA 90 bp ATCACTCTCTTAAATGTCAATTCAAAAACAGAGCCTCCGCTGTCGTaGCAAATTGCAAGAGTTGGATCATCTGTAAACTTGATATGCAAT +
Preference number: 6 (lower is better)
Translates to: ITLLNVNSKTEPPLS*QIARVGSSVNLICN
Trigger: ATTGCATATCAAGTTTACAGATGATCCAACTCTTGCAATTTGCAACGACAGCGGAGGCTCTGTTTTTGAATTGACATTTAAGAGAGTGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000465818.5
ENST00000469713.1
ENST00000625842.3
CDS TCA 72 bp GTAAACTTGATATGCAATATTGCTGTTCCTGGAGGATaGGCATCTGTTATTGATCTTAGAAGTTTTCCACTG +
Preference number: 6 (lower is better)
Translates to: VNLICNIAVPGG*ASVIDLRSFPL
Trigger: CAGTGGAAAACTTCTAAGATCAATAACAGATGCTCATCCTCCAGGAACAGCAATATTGCATATCAAGTTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000287546.8
ENST00000436792.6
ENST00000446204.6
ENST00000452666.3
ENST00000465818.5
ENST00000469713.1
ENST00000625842.3
CDS GCA 72 bp CCATATCCTCATGACCAAGTGAGGTTTATTCCAGGATaGAAGACTGGTTCAATATTCAAAAACCAATCATTA +
Preference number: 6 (lower is better)
Translates to: PYPHDQVRFIPG*KTGSIFKNQSL
Trigger: TAATGATTGGTTTTTGAATATTGAACCAGTCTTGCATCCTGGAATAAACCTCACTTGGTCATGAGGATATGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421069.5