Pregenerated sensors for VPS72 (Homo sapiens)
Ensembl gene IDs: ENSG00000163159Ensembl transcript IDs: ENST00000354473.4, ENST00000368892.9, ENST00000463470.1, ENST00000471423.1, ENST00000496809.5, ENST00000640458.1
Found 123 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 72 bp | CAGGTATTCAAATACTTCTTGCTCCCAACCCTAGACTaGACACCAGACAAAAGGGATCTTTCTATTTTATTA | + |
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Preference number: 3 (lower is better) Translates to: QVFKYFLLPTLD*TPDKRDLSILL Trigger: TAATAAAATAGAAAGATCCCTTTTGTCTGGTGTCCAGTCTAGGGTTGGGAGCAAGAAGTATTTGAATACCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368892.9 |
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| CDS-3UTR GCA 90 bp | ACAGCAAGAGCCCCAATCAGGGCAGGAAAGAAGTTTCTGAGGACTAGACATCTCACCGCCTACCGAGACTaGGCCGCCACCTGCAGCCCC | + |
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Preference number: 4 (lower is better) Translates to: TARAPIRAGKKFLRTRHLTAYRD*AATCSP Trigger: GGGGCTGCAGGTGGCGGCGCAGTCTCGGTAGGCGGT...GAGATGTCTAGTCCTCAGAAACTTCTTTCCTGCCCTGATTGGGGCTCTTGCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000354473.4 ENST00000368892.9 |
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| CDS-3UTR GCA 90 bp | AGGGAGAAGAAACGGAACAGCAAGAGCCCCAATCAGGGCAGGAAAGAAGTTTCTACCGCCTACCGAGACTaGGCCGCCACCTGCAGCCCC | + |
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Preference number: 4 (lower is better) Translates to: REKKRNSKSPNQGRKEVSTAYRD*AATCSP Trigger: GGGGCTGCAGGTGGCGGCGCAGTCTCGGTAGGCGGT...AGAAACTTCTTTCCTGCCCTGATTGGGGCTCTTGCTGTTCCGTTTCTTCTCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000354473.4 ENST00000368892.9 |
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| CDS-3UTR GCA 90 bp | AAGCAGGGAGAAGAAACGGAACAGCAAGAGCCCCAATCAGGGCAGGAAAGAAGTAGCGGTCTTCCGGGGTaGCCGGCCCCCAGCCAAACT | + |
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Preference number: 4 (lower is better) Translates to: KQGEETEQQEPQSGQERSSGLPG*PAPSQT Trigger: AGTTTGGCTGGGGGCCGGGCACCCCGGAAGACCGCT...ACTTCTTTCCTGCCCTGATTGGGGCTCTTGCTGTTCCGTTTCTTCTCCCTGCTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000354473.4 ENST00000368892.9 |
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| CDS-3UTR TCA 90 bp | AGAAGCAGGGAGAAGAAACGGAACAGCAAGAGCCCCAATCAGGGCAGGAAAGAATCTTCTCGCGCCTTCTaGGAGCTACCAGCCGGGGTG | + |
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Preference number: 4 (lower is better) Translates to: RSREKKRNSKSPNQGRKESSRAF*ELPAGV Trigger: CACCCCGGCTGGTAGCTCTCAGAAGGCGCGAGAAGA...TTCTTTCCTGCCCTGATTGGGGCTCTTGCTGTTCCGTTTCTTCTCCCTGCTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000354473.4 ENST00000368892.9 |
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| CDS-3UTR TCA 90 bp | ACAGCAAGAGCCCCAATCAGGGCAGGAAAGAAGTTTCTGAGGACTAGACATCTCCCCCTTTCGCCGTCTTaGCTGGCCCTGCCTCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: TARAPIRAGKKFLRTRHLPLSPS*LALPLL Trigger: CAGGAGAGGCAGGGCCAGTCAAGACGGCGAAAGGGG...GAGATGTCTAGTCCTCAGAAACTTCTTTCCTGCCCTGATTGGGGCTCTTGCTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000354473.4 ENST00000368892.9 |
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| CDS-3UTR CCA 90 bp | AGCAGGGAGAAGAAACGGAACAGCAAGAGCCCCAATCAGGGCAGGAAAGAAGTTAGTGGCCGCTCACAGTaGGGCCCCTTTCGCCGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SREKKRNSKSPNQGRKEVSGRSQ*GPFRRL Trigger: AAGACGGCGAAAGGGGCCCCACTGTGAGCGGCCACT...AACTTCTTTCCTGCCCTGATTGGGGCTCTTGCTGTTCCGTTTCTTCTCCCTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000354473.4 ENST00000368892.9 |
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| CDS-3UTR TCA 90 bp | AACGGAACAGCAAGAGCCCCAATCAGGGCAGGAAAGAAGTTTCTGAGGACTAGATCTTCTCGCGCCTTCTaGGAGCTACCAGCCGGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: NGTARAPIRAGKKFLRTRSSRAF*ELPAGV Trigger: CACCCCGGCTGGTAGCTCTCAGAAGGCGCGAGAAGA...TCTAGTCCTCAGAAACTTCTTTCCTGCCCTGATTGGGGCTCTTGCTGTTCCGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000354473.4 ENST00000368892.9 |
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| CDS-3UTR GCA 90 bp | AAGAAACAGATTAGGCAAAGATCAGAGATGACAAAGGGGAGAAGCAGGGAGAAGGACTGCGCCGCCACCTaGAGCCCCTCACCAGCTCGG | + |
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Preference number: 4 (lower is better) Translates to: KKQIRQRSEMTKGRSREKDCAAT*SPSPAR Trigger: CCGAGCTGGTGAGGGGCTGCAGGTGGCGGCGCAGTC...CTTCTCCCTGCTTCTCCCCTTTGTCATCTCTGATCTTTGCCTAATCTGTTTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368892.9 |
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| CDS-3UTR CCA 90 bp | ACAGCAAGAGCCCCAATCAGGGCAGGAAAGAAGTTTCTGAGGACTAGACATCTCAGTGGCCGCTCACAGTaGGGCCCCTTTCGCCGTCTT | + |
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Preference number: 4 (lower is better) Translates to: TARAPIRAGKKFLRTRHLSGRSQ*GPFRRL Trigger: AAGACGGCGAAAGGGGCCCCACTGTGAGCGGCCACT...GAGATGTCTAGTCCTCAGAAACTTCTTTCCTGCCCTGATTGGGGCTCTTGCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000354473.4 ENST00000368892.9 |
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| CDS-3UTR CCA 90 bp | AGAAGCAGGGAGAAGAAACGGAACAGCAAGAGCCCCAATCAGGGCAGGAAAGAACGGAGCAGTTCCTCCTaGGTTAGTGGCCGCTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: RSREKKRNSKSPNQGRKERSSSS*VSGRSQ Trigger: CTGTGAGCGGCCACTAACCCAGGAGGAACTGCTCCG...TTCTTTCCTGCCCTGATTGGGGCTCTTGCTGTTCCGTTTCTTCTCCCTGCTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000354473.4 ENST00000368892.9 |
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| CDS-3UTR CCA 90 bp | AAGCAGGGAGAAGAAACGGAACAGCAAGAGCCCCAATCAGGGCAGGAAAGAAGTCTCTTCCTTGGGGCCTaGCTCCCCAACAAGTGGCAC | + |
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Preference number: 4 (lower is better) Translates to: KQGEETEQQEPQSGQERSLFLGA*LPNKWH Trigger: GTGCCACTTGTTGGGGAGCCAGGCCCCAAGGAAGAG...ACTTCTTTCCTGCCCTGATTGGGGCTCTTGCTGTTCCGTTTCTTCTCCCTGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000354473.4 ENST00000368892.9 |
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| CDS-3UTR TCA 90 bp | AAGCAGGGAGAAGAAACGGAACAGCAAGAGCCCCAATCAGGGCAGGAAAGAAGTTACCAGCCGGGGTGTTaGCCTTTCGAGGCCTTAAGC | + |
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Preference number: 4 (lower is better) Translates to: KQGEETEQQEPQSGQERSYQPGC*PFEALS Trigger: GCTTAAGGCCTCGAAAGGTCAACACCCCGGCTGGTA...ACTTCTTTCCTGCCCTGATTGGGGCTCTTGCTGTTCCGTTTCTTCTCCCTGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000354473.4 ENST00000368892.9 |
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| CDS-3UTR GCA 90 bp | AGGGAGAAGAAACGGAACAGCAAGAGCCCCAATCAGGGCAGGAAAGAAGTTTCTCGTCTTGACTGGCCCTaGCTCTCCTGTACCCGAAGG | + |
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Preference number: 4 (lower is better) Translates to: REKKRNSKSPNQGRKEVSRLDWP*LSCTRR Trigger: CCTTCGGGTACAGGAGAGGCAGGGCCAGTCAAGACG...AGAAACTTCTTTCCTGCCCTGATTGGGGCTCTTGCTGTTCCGTTTCTTCTCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000354473.4 ENST00000368892.9 |
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| CDS-3UTR GCA 90 bp | GAGAAGAAACGGAACAGCAAGAGCCCCAATCAGGGCAGGAAAGAAGTTTCTGAGCGTCTTGACTGGCCCTaGCTCTCCTGTACCCGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: EKKRNSKSPNQGRKEVSERLDWP*LSCTRR Trigger: CCTTCGGGTACAGGAGAGGCAGGGCCAGTCAAGACG...CTCAGAAACTTCTTTCCTGCCCTGATTGGGGCTCTTGCTGTTCCGTTTCTTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000354473.4 ENST00000368892.9 |
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| CDS-3UTR CCA 90 bp | ACAGCAAGAGCCCCAATCAGGGCAGGAAAGAAGTTTCTGAGGACTAGACATCTCCTCTTCCTTGGGGCCTaGCTCCCCAACAAGTGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: TARAPIRAGKKFLRTRHLLFLGA*LPNKWH Trigger: GTGCCACTTGTTGGGGAGCCAGGCCCCAAGGAAGAG...GAGATGTCTAGTCCTCAGAAACTTCTTTCCTGCCCTGATTGGGGCTCTTGCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000354473.4 ENST00000368892.9 |
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| CDS-3UTR CCA 90 bp | AGCAGGGAGAAGAAACGGAACAGCAAGAGCCCCAATCAGGGCAGGAAAGAAGTTTTTGGGGGCCGCCCTTaGGGGAACCATTCCTCGAAA | + |
|
Preference number: 4 (lower is better) Translates to: SREKKRNSKSPNQGRKEVFGGRP*GNHSSK Trigger: TTTCGAGGAATGGTTCCCCCAAGGGCGGCCCCCAAA...AACTTCTTTCCTGCCCTGATTGGGGCTCTTGCTGTTCCGTTTCTTCTCCCTGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENST00000354473.4 ENST00000368892.9 |
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| CDS-3UTR CCA 90 bp | AGAAGCAGGGAGAAGAAACGGAACAGCAAGAGCCCCAATCAGGGCAGGAAAGAATTTGGGGGCCGCCCTTaGGGGAACCATTCCTCGAAA | + |
|
Preference number: 4 (lower is better) Translates to: RSREKKRNSKSPNQGRKEFGGRP*GNHSSK Trigger: TTTCGAGGAATGGTTCCCCCAAGGGCGGCCCCCAAA...TTCTTTCCTGCCCTGATTGGGGCTCTTGCTGTTCCGTTTCTTCTCCCTGCTTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000354473.4 ENST00000368892.9 |
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| CDS-3UTR TCA 90 bp | AGAAGCAGGGAGAAGAAACGGAACAGCAAGAGCCCCAATCAGGGCAGGAAAGAACCTTATAGGCCTTGGTaGCTACTCGGCGCTTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RSREKKRNSKSPNQGRKEPYRPW*LLGASF Trigger: GAAGGAAGCGCCGAGTAGTCACCAAGGCCTATAAGG...TTCTTTCCTGCCCTGATTGGGGCTCTTGCTGTTCCGTTTCTTCTCCCTGCTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000354473.4 ENST00000368892.9 |
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| CDS-3UTR TCA 90 bp | GAGAAGAAACGGAACAGCAAGAGCCCCAATCAGGGCAGGAAAGAAGTTTCTGAGTACCAGCCGGGGTGTTaGCCTTTCGAGGCCTTAAGC | + |
|
Preference number: 4 (lower is better) Translates to: EKKRNSKSPNQGRKEVSEYQPGC*PFEALS Trigger: GCTTAAGGCCTCGAAAGGTCAACACCCCGGCTGGTA...CTCAGAAACTTCTTTCCTGCCCTGATTGGGGCTCTTGCTGTTCCGTTTCTTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000354473.4 ENST00000368892.9 |
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| CDS-3UTR TCA 90 bp | GAGAAGAAACGGAACAGCAAGAGCCCCAATCAGGGCAGGAAAGAAGTTTCTGAGGGTCCAGTCCCAGCATaGGGAGTCAATGCAGACACC | + |
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Preference number: 4 (lower is better) Translates to: EKKRNSKSPNQGRKEVSEGPVPA*GVNADT Trigger: GGTGTCTGCATTGACTCCTCATGCTGGGACTGGACC...CTCAGAAACTTCTTTCCTGCCCTGATTGGGGCTCTTGCTGTTCCGTTTCTTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000354473.4 ENST00000368892.9 |
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| CDS-3UTR TCA 90 bp | ACAGCAAGAGCCCCAATCAGGGCAGGAAAGAAGTTTCTGAGGACTAGACATCTCGGTCCAGTCCCAGCATaGGGAGTCAATGCAGACACC | + |
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Preference number: 4 (lower is better) Translates to: TARAPIRAGKKFLRTRHLGPVPA*GVNADT Trigger: GGTGTCTGCATTGACTCCTCATGCTGGGACTGGACC...GAGATGTCTAGTCCTCAGAAACTTCTTTCCTGCCCTGATTGGGGCTCTTGCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000354473.4 ENST00000368892.9 |
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| CDS-3UTR GCA 90 bp | ATATATGCAGGTATTCAAATACTTCTTGCTCCCAACCCTAGACTGGACACCAGAAGCGGTCTTCCGGGGTaGCCGGCCCCCAGCCAAACT | + |
|
Preference number: 4 (lower is better) Translates to: IYAGIQILLAPNPRLDTRSGLPG*PAPSQT Trigger: AGTTTGGCTGGGGGCCGGGCACCCCGGAAGACCGCT...TCTGGTGTCCAGTCTAGGGTTGGGAGCAAGAAGTATTTGAATACCTGCATATAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000368892.9 |
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| CDS-3UTR CCA 90 bp | GAGAAGAAACGGAACAGCAAGAGCCCCAATCAGGGCAGGAAAGAAGTTTCTGAGTTTCGCCGTCTTGACTaGCCCTGCCTCTCCTGTACC | + |
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Preference number: 4 (lower is better) Translates to: EKKRNSKSPNQGRKEVSEFRRLD*PCLSCT Trigger: GGTACAGGAGAGGCAGGGCCAGTCAAGACGGCGAAA...CTCAGAAACTTCTTTCCTGCCCTGATTGGGGCTCTTGCTGTTCCGTTTCTTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000354473.4 ENST00000368892.9 |
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| CDS-3UTR CCA 90 bp | AGCAGGGAGAAGAAACGGAACAGCAAGAGCCCCAATCAGGGCAGGAAAGAAGTTCAACGTTCTCTTCCTTaGGGCCTGGCTCCCCAACAA | + |
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Preference number: 4 (lower is better) Translates to: SREKKRNSKSPNQGRKEVQRSLP*GLAPQQ Trigger: TTGTTGGGGAGCCAGGCCCCAAGGAAGAGAACGTTG...AACTTCTTTCCTGCCCTGATTGGGGCTCTTGCTGTTCCGTTTCTTCTCCCTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000354473.4 ENST00000368892.9 |
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| CDS-3UTR TCA 90 bp | AGAAGAAACGGAACAGCAAGAGCCCCAATCAGGGCAGGAAAGAAGTTTCTGAGGCCTTATAGGCCTTGGTaGCTACTCGGCGCTTCCTTC | + |
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Preference number: 4 (lower is better) Translates to: RRNGTARAPIRAGKKFLRPYRPW*LLGASF Trigger: GAAGGAAGCGCCGAGTAGTCACCAAGGCCTATAAGG...CCTCAGAAACTTCTTTCCTGCCCTGATTGGGGCTCTTGCTGTTCCGTTTCTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000354473.4 ENST00000368892.9 |
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| CDS-3UTR TCA 90 bp | ATATATGCAGGTATTCAAATACTTCTTGCTCCCAACCCTAGACTGGACACCAGACCCCTTTCGCCGTCTTaGCTGGCCCTGCCTCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: IYAGIQILLAPNPRLDTRPLSPS*LALPLL Trigger: CAGGAGAGGCAGGGCCAGTCAAGACGGCGAAAGGGG...TCTGGTGTCCAGTCTAGGGTTGGGAGCAAGAAGTATTTGAATACCTGCATATAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368892.9 |
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| CDS-3UTR CCA 90 bp | AAGCAGGGAGAAGAAACGGAACAGCAAGAGCCCCAATCAGGGCAGGAAAGAAGTTCGGCGCTTCCTTCTTaGCTCTTCTGCTTCTCCATC | + |
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Preference number: 4 (lower is better) Translates to: KQGEETEQQEPQSGQERSSALPS*LFCFSI Trigger: GATGGAGAAGCAGAAGAGCCAAGAAGGAAGCGCCGA...ACTTCTTTCCTGCCCTGATTGGGGCTCTTGCTGTTCCGTTTCTTCTCCCTGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000354473.4 ENST00000368892.9 |
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| CDS-3UTR CCA 90 bp | AGCAGGGAGAAGAAACGGAACAGCAAGAGCCCCAATCAGGGCAGGAAAGAAGTTTCGGCGCTTCCTTCTTaGCTCTTCTGCTTCTCCATC | + |
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Preference number: 4 (lower is better) Translates to: SREKKRNSKSPNQGRKEVSALPS*LFCFSI Trigger: GATGGAGAAGCAGAAGAGCCAAGAAGGAAGCGCCGA...AACTTCTTTCCTGCCCTGATTGGGGCTCTTGCTGTTCCGTTTCTTCTCCCTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000354473.4 ENST00000368892.9 |
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| CDS-3UTR CCA 90 bp | ACAGCAAGAGCCCCAATCAGGGCAGGAAAGAAGTTTCTGAGGACTAGACATCTCCAACGTTCTCTTCCTTaGGGCCTGGCTCCCCAACAA | + |
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Preference number: 4 (lower is better) Translates to: TARAPIRAGKKFLRTRHLQRSLP*GLAPQQ Trigger: TTGTTGGGGAGCCAGGCCCCAAGGAAGAGAACGTTG...GAGATGTCTAGTCCTCAGAAACTTCTTTCCTGCCCTGATTGGGGCTCTTGCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000354473.4 ENST00000368892.9 |
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| CDS-3UTR CCA 90 bp | AGAAGAAACGGAACAGCAAGAGCCCCAATCAGGGCAGGAAAGAAGTTTCTGAGGTGGACGATGGGTCACTaGACAGACCTCACGAACAGG | + |
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Preference number: 4 (lower is better) Translates to: RRNGTARAPIRAGKKFLRWTMGH*TDLTNR Trigger: CCTGTTCGTGAGGTCTGTCCAGTGACCCATCGTCCA...CCTCAGAAACTTCTTTCCTGCCCTGATTGGGGCTCTTGCTGTTCCGTTTCTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000354473.4 ENST00000368892.9 |
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| CDS-3UTR CCA 90 bp | AGCAGGGAGAAGAAACGGAACAGCAAGAGCCCCAATCAGGGCAGGAAAGAAGTTGTGGGCGGCAGTCCATaGGCAGTAATGTACTTCTTG | + |
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Preference number: 4 (lower is better) Translates to: SREKKRNSKSPNQGRKEVVGGSP*AVMYFL Trigger: CAAGAAGTACATTACTGCCCATGGACTGCCGCCCAC...AACTTCTTTCCTGCCCTGATTGGGGCTCTTGCTGTTCCGTTTCTTCTCCCTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000354473.4 ENST00000368892.9 |
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| CDS-3UTR TCA 90 bp | AGAAGAAACGGAACAGCAAGAGCCCCAATCAGGGCAGGAAAGAAGTTTCTGAGGCTCCGGATTCCTCTGTaGAACCCCCATAAGTCGTCT | + |
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Preference number: 4 (lower is better) Translates to: RRNGTARAPIRAGKKFLRLRIPL*NPHKSS Trigger: AGACGACTTATGGGGGTTTCACAGAGGAATCCGGAG...CCTCAGAAACTTCTTTCCTGCCCTGATTGGGGCTCTTGCTGTTCCGTTTCTTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000354473.4 ENST00000368892.9 |
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| CDS-3UTR TCA 90 bp | AGAAGCAGGGAGAAGAAACGGAACAGCAAGAGCCCCAATCAGGGCAGGAAAGAATCTGACTGGTCCCCTTaGTACTCATCATCTCCGGAT | + |
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Preference number: 4 (lower is better) Translates to: RSREKKRNSKSPNQGRKESDWSP*YSSSPD Trigger: ATCCGGAGATGATGAGTATCAAGGGGACCAGTCAGA...TTCTTTCCTGCCCTGATTGGGGCTCTTGCTGTTCCGTTTCTTCTCCCTGCTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000354473.4 ENST00000368892.9 |
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| CDS-3UTR TCA 90 bp | GAGAAGAAACGGAACAGCAAGAGCCCCAATCAGGGCAGGAAAGAAGTTTCTGAGTTCGTCCTCTGTGTCTaGCTGGTCCCCTTGATACTC | + |
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Preference number: 4 (lower is better) Translates to: EKKRNSKSPNQGRKEVSEFVLCV*LVPLIL Trigger: GAGTATCAAGGGGACCAGTCAGACACAGAGGACGAA...CTCAGAAACTTCTTTCCTGCCCTGATTGGGGCTCTTGCTGTTCCGTTTCTTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000354473.4 ENST00000368892.9 |
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| CDS-3UTR TCA 90 bp | AGAAGCAGGGAGAAGAAACGGAACAGCAAGAGCCCCAATCAGGGCAGGAAAGAAGAGGCCTTAAGCTCTTaGGAGGTTCCTTATAGGCCT | + |
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Preference number: 4 (lower is better) Translates to: RSREKKRNSKSPNQGRKEEALSS*EVPYRP Trigger: AGGCCTATAAGGAACCTCTCAAGAGCTTAAGGCCTC...TTCTTTCCTGCCCTGATTGGGGCTCTTGCTGTTCCGTTTCTTCTCCCTGCTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000354473.4 ENST00000368892.9 |
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| CDS-3UTR TCA 90 bp | GAGAAGAAACGGAACAGCAAGAGCCCCAATCAGGGCAGGAAAGAAGTTTCTGAGTGCTCAGCTGTAGACTaGCGCATAGACTTCCGACTG | + |
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Preference number: 4 (lower is better) Translates to: EKKRNSKSPNQGRKEVSECSAVD*RIDFRL Trigger: CAGTCGGAAGTCTATGCGTCAGTCTACAGCTGAGCA...CTCAGAAACTTCTTTCCTGCCCTGATTGGGGCTCTTGCTGTTCCGTTTCTTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000354473.4 ENST00000368892.9 |
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| CDS-3UTR TCA 90 bp | ACAGCAAGAGCCCCAATCAGGGCAGGAAAGAAGTTTCTGAGGACTAGACATCTCTCACTGAATGATAGGTaGTTATGGGCCCGGGGCACT | + |
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Preference number: 4 (lower is better) Translates to: TARAPIRAGKKFLRTRHLSLNDR*LWARGT Trigger: AGTGCCCCGGGCCCATAATCACCTATCATTCAGTGA...GAGATGTCTAGTCCTCAGAAACTTCTTTCCTGCCCTGATTGGGGCTCTTGCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000354473.4 ENST00000368892.9 |
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| CDS-3UTR CCA 90 bp | TTCAAATACTTCTTGCTCCCAACCCTAGACTGGACACCAGACAAAAGGGATCTTCGGAGCAGTTCCTCCTaGGTTAGTGGCCGCTCACAG | + |
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Preference number: 4 (lower is better) Translates to: FKYFLLPTLDWTPDKRDLRSSSS*VSGRSQ Trigger: CTGTGAGCGGCCACTAACCCAGGAGGAACTGCTCCG...AAGATCCCTTTTGTCTGGTGTCCAGTCTAGGGTTGGGAGCAAGAAGTATTTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368892.9 |
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| CDS-3UTR CCA 90 bp | AGGGAGAAGAAACGGAACAGCAAGAGCCCCAATCAGGGCAGGAAAGAAGTTTCTTATAGGGCTGGACGATaGGTCACTGGACAGACCTCA | + |
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Preference number: 4 (lower is better) Translates to: REKKRNSKSPNQGRKEVSYRAGR*VTGQTS Trigger: TGAGGTCTGTCCAGTGACCCATCGTCCAGCCCTATA...AGAAACTTCTTTCCTGCCCTGATTGGGGCTCTTGCTGTTCCGTTTCTTCTCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000354473.4 ENST00000368892.9 |
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| CDS-3UTR CCA 90 bp | AGAAGAAACGGAACAGCAAGAGCCCCAATCAGGGCAGGAAAGAAGTTTCTGAGGTATAGGGCTGGACGATaGGTCACTGGACAGACCTCA | + |
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Preference number: 4 (lower is better) Translates to: RRNGTARAPIRAGKKFLRYRAGR*VTGQTS Trigger: TGAGGTCTGTCCAGTGACCCATCGTCCAGCCCTATA...CCTCAGAAACTTCTTTCCTGCCCTGATTGGGGCTCTTGCTGTTCCGTTTCTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000354473.4 ENST00000368892.9 |
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| CDS-3UTR CCA 90 bp | ACAGCAAGAGCCCCAATCAGGGCAGGAAAGAAGTTTCTGAGGACTAGACATCTCGTGGGCGGCAGTCCATaGGCAGTAATGTACTTCTTG | + |
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Preference number: 4 (lower is better) Translates to: TARAPIRAGKKFLRTRHLVGGSP*AVMYFL Trigger: CAAGAAGTACATTACTGCCCATGGACTGCCGCCCAC...GAGATGTCTAGTCCTCAGAAACTTCTTTCCTGCCCTGATTGGGGCTCTTGCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000354473.4 ENST00000368892.9 |
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| CDS-3UTR CCA 90 bp | AGCAGGGAGAAGAAACGGAACAGCAAGAGCCCCAATCAGGGCAGGAAAGAAGTTTTAATGACAATTTTCTaGCGCAAGGCTCGGGGCCCA | + |
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Preference number: 4 (lower is better) Translates to: SREKKRNSKSPNQGRKEVLMTIF*RKARGP Trigger: TGGGCCCCGAGCCTTGCGCCAGAAAATTGTCATTAA...AACTTCTTTCCTGCCCTGATTGGGGCTCTTGCTGTTCCGTTTCTTCTCCCTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000354473.4 ENST00000368892.9 |
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| CDS-3UTR GCA 90 bp | AGGGAGAAGAAACGGAACAGCAAGAGCCCCAATCAGGGCAGGAAAGAAGTTTCTCCTTCTTGGCTCTTCTaGTTCTCCATCACTGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: REKKRNSKSPNQGRKEVSPSWLF*FSITGW Trigger: CCATCCAGTGATGGAGAAGCAGAAGAGCCAAGAAGG...AGAAACTTCTTTCCTGCCCTGATTGGGGCTCTTGCTGTTCCGTTTCTTCTCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000354473.4 ENST00000368892.9 |
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| CDS-3UTR CCA 90 bp | AGGGAGAAGAAACGGAACAGCAAGAGCCCCAATCAGGGCAGGAAAGAAGTTTCTTTAATGACAATTTTCTaGCGCAAGGCTCGGGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: REKKRNSKSPNQGRKEVSLMTIF*RKARGP Trigger: TGGGCCCCGAGCCTTGCGCCAGAAAATTGTCATTAA...AGAAACTTCTTTCCTGCCCTGATTGGGGCTCTTGCTGTTCCGTTTCTTCTCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000354473.4 ENST00000368892.9 |
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| CDS-3UTR CCA 90 bp | ACAGCAAGAGCCCCAATCAGGGCAGGAAAGAAGTTTCTGAGGACTAGACATCTCCTCCCAACCCTAGACTaGACACCAGACAAAAGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: TARAPIRAGKKFLRTRHLLPTLD*TPDKRD Trigger: ATCCCTTTTGTCTGGTGTCCAGTCTAGGGTTGGGAG...GAGATGTCTAGTCCTCAGAAACTTCTTTCCTGCCCTGATTGGGGCTCTTGCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368892.9 |
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| CDS-3UTR TCA 90 bp | AGAAGCAGGGAGAAGAAACGGAACAGCAAGAGCCCCAATCAGGGCAGGAAAGAAAAGTGGCACTGTCACTaGATGATAGGTGATTATGGG | + |
|
Preference number: 4 (lower is better) Translates to: RSREKKRNSKSPNQGRKEKWHCH*MIGDYG Trigger: CCCATAATCACCTATCATTCAGTGACAGTGCCACTT...TTCTTTCCTGCCCTGATTGGGGCTCTTGCTGTTCCGTTTCTTCTCCCTGCTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000354473.4 ENST00000368892.9 |
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| CDS-3UTR TCA 90 bp | AAGAAACAGATTAGGCAAAGATCAGAGATGACAAAGGGGAGAAGCAGGGAGAAGCTCCGGATTCCTCTGTaGAACCCCCATAAGTCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: KKQIRQRSEMTKGRSREKLRIPL*NPHKSS Trigger: AGACGACTTATGGGGGTTTCACAGAGGAATCCGGAG...CTTCTCCCTGCTTCTCCCCTTTGTCATCTCTGATCTTTGCCTAATCTGTTTCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000354473.4 ENST00000368892.9 |
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| CDS-3UTR TCA 90 bp | TTCAAATACTTCTTGCTCCCAACCCTAGACTGGACACCAGACAAAAGGGATCTTTGCTCAGCTGTAGACTaGCGCATAGACTTCCGACTG | + |
|
Preference number: 4 (lower is better) Translates to: FKYFLLPTLDWTPDKRDLCSAVD*RIDFRL Trigger: CAGTCGGAAGTCTATGCGTCAGTCTACAGCTGAGCA...AAGATCCCTTTTGTCTGGTGTCCAGTCTAGGGTTGGGAGCAAGAAGTATTTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368892.9 |
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| CDS-3UTR TCA 90 bp | TTCAAATACTTCTTGCTCCCAACCCTAGACTGGACACCAGACAAAAGGGATCTTTCACTGAATGATAGGTaGTTATGGGCCCGGGGCACT | + |
|
Preference number: 4 (lower is better) Translates to: FKYFLLPTLDWTPDKRDLSLNDR*LWARGT Trigger: AGTGCCCCGGGCCCATAATCACCTATCATTCAGTGA...AAGATCCCTTTTGTCTGGTGTCCAGTCTAGGGTTGGGAGCAAGAAGTATTTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368892.9 |
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| CDS-3UTR TCA 90 bp | AGAAGAAACGGAACAGCAAGAGCCCCAATCAGGGCAGGAAAGAAGTTTCTGAGGAAGTGGCACTGTCACTaGATGATAGGTGATTATGGG | + |
|
Preference number: 4 (lower is better) Translates to: RRNGTARAPIRAGKKFLRKWHCH*MIGDYG Trigger: CCCATAATCACCTATCATTCAGTGACAGTGCCACTT...CCTCAGAAACTTCTTTCCTGCCCTGATTGGGGCTCTTGCTGTTCCGTTTCTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000354473.4 ENST00000368892.9 |
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| CDS-3UTR TCA 90 bp | AGCAGGGAGAAGAAACGGAACAGCAAGAGCCCCAATCAGGGCAGGAAAGAAGTTCAGGAAAGAAGTTTCTaGGGACTAGACATCTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SREKKRNSKSPNQGRKEVQERSF*GLDISS Trigger: TGAAGAGATGTCTAGTCCTCAGAAACTTCTTTCCTG...AACTTCTTTCCTGCCCTGATTGGGGCTCTTGCTGTTCCGTTTCTTCTCCCTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000354473.4 ENST00000368892.9 |
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| CDS-3UTR CCA 90 bp | ATATATGCAGGTATTCAAATACTTCTTGCTCCCAACCCTAGACTGGACACCAGATCACCAGCTCGGTTTTaGGAGCTCGACGCTCGACAT | + |
|
Preference number: 4 (lower is better) Translates to: IYAGIQILLAPNPRLDTRSPARF*ELDARH Trigger: ATGTCGAGCGTCGAGCTCCCAAAACCGAGCTGGTGA...TCTGGTGTCCAGTCTAGGGTTGGGAGCAAGAAGTATTTGAATACCTGCATATAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368892.9 |
||
| CDS-3UTR TCA 90 bp | GAGAAGAAACGGAACAGCAAGAGCCCCAATCAGGGCAGGAAAGAAGTTTCTGAGCAGGAAAGAAGTTTCTaGGGACTAGACATCTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: EKKRNSKSPNQGRKEVSEQERSF*GLDISS Trigger: TGAAGAGATGTCTAGTCCTCAGAAACTTCTTTCCTG...CTCAGAAACTTCTTTCCTGCCCTGATTGGGGCTCTTGCTGTTCCGTTTCTTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000354473.4 ENST00000368892.9 |
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| CDS-3UTR GCA 90 bp | AAGAAACAGATTAGGCAAAGATCAGAGATGACAAAGGGGAGAAGCAGGGAGAAGCTCATCTTCCTCCTCTaGCTCCAAAAGCCCAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: KKQIRQRSEMTKGRSREKLIFLL*LQKPRK Trigger: CTTTCTGGGCTTTTGGAGGCAGAGGAGGAAGATGAG...CTTCTCCCTGCTTCTCCCCTTTGTCATCTCTGATCTTTGCCTAATCTGTTTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000354473.4 ENST00000368892.9 |
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| CDS-3UTR GCA 90 bp | AAGAAACAGATTAGGCAAAGATCAGAGATGACAAAGGGGAGAAGCAGGGAGAAGCCTTCTTGGCTCTTCTaGTTCTCCATCACTGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: KKQIRQRSEMTKGRSREKPSWLF*FSITGW Trigger: CCATCCAGTGATGGAGAAGCAGAAGAGCCAAGAAGG...CTTCTCCCTGCTTCTCCCCTTTGTCATCTCTGATCTTTGCCTAATCTGTTTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000354473.4 ENST00000368892.9 |
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| CDS-3UTR CCA 90 bp | ACAGCAAGAGCCCCAATCAGGGCAGGAAAGAAGTTTCTGAGGACTAGACATCTCTTCTCCATCACTGGATaGTTCATCCCCTTCATCAAT | + |
|
Preference number: 4 (lower is better) Translates to: TARAPIRAGKKFLRTRHLFSITG*FIPFIN Trigger: ATTGATGAAGGGGATGAACCATCCAGTGATGGAGAA...GAGATGTCTAGTCCTCAGAAACTTCTTTCCTGCCCTGATTGGGGCTCTTGCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000354473.4 ENST00000368892.9 |
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| CDS-3UTR TCA 90 bp | ATATATGCAGGTATTCAAATACTTCTTGCTCCCAACCCTAGACTGGACACCAGATCTGACTGGTCCCCTTaGTACTCATCATCTCCGGAT | + |
|
Preference number: 4 (lower is better) Translates to: IYAGIQILLAPNPRLDTRSDWSP*YSSSPD Trigger: ATCCGGAGATGATGAGTATCAAGGGGACCAGTCAGA...TCTGGTGTCCAGTCTAGGGTTGGGAGCAAGAAGTATTTGAATACCTGCATATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368892.9 |
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| CDS-3UTR TCA 90 bp | ATATATGCAGGTATTCAAATACTTCTTGCTCCCAACCCTAGACTGGACACCAGAGAGGCCTTAAGCTCTTaGGAGGTTCCTTATAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: IYAGIQILLAPNPRLDTREALSS*EVPYRP Trigger: AGGCCTATAAGGAACCTCTCAAGAGCTTAAGGCCTC...TCTGGTGTCCAGTCTAGGGTTGGGAGCAAGAAGTATTTGAATACCTGCATATAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368892.9 |
||
| CDS-3UTR TCA 90 bp | AGAAGAAACGGAACAGCAAGAGCCCCAATCAGGGCAGGAAAGAAGTTTCTGAGGCACTTCCGCTTCTTATaGACCTGCTTCTTTTTATCA | + |
|
Preference number: 4 (lower is better) Translates to: RRNGTARAPIRAGKKFLRHFRFL*TCFFLS Trigger: TGATAAAAAGAAGCAGGTTCATAAGAAGCGGAAGTG...CCTCAGAAACTTCTTTCCTGCCCTGATTGGGGCTCTTGCTGTTCCGTTTCTTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000354473.4 ENST00000368892.9 |
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| CDS-3UTR GCA 90 bp | AGCAGGGAGAAGAAACGGAACAGCAAGAGCCCCAATCAGGGCAGGAAAGAAGTTCCATTCCTCGAAAGTTaGATCATCACTAAAAGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: SREKKRNSKSPNQGRKEVPFLES*IITKSD Trigger: ATCACTTTTAGTGATGATGCAACTTTCGAGGAATGG...AACTTCTTTCCTGCCCTGATTGGGGCTCTTGCTGTTCCGTTTCTTCTCCCTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000354473.4 ENST00000368892.9 |
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| CDS-3UTR CCA 90 bp | AAGAAACAGATTAGGCAAAGATCAGAGATGACAAAGGGGAGAAGCAGGGAGAAGTTCTCCATCACTGGATaGTTCATCCCCTTCATCAAT | + |
|
Preference number: 4 (lower is better) Translates to: KKQIRQRSEMTKGRSREKFSITG*FIPFIN Trigger: ATTGATGAAGGGGATGAACCATCCAGTGATGGAGAA...CTTCTCCCTGCTTCTCCCCTTTGTCATCTCTGATCTTTGCCTAATCTGTTTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000354473.4 ENST00000368892.9 |
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| CDS-3UTR TCA 90 bp | ATATATGCAGGTATTCAAATACTTCTTGCTCCCAACCCTAGACTGGACACCAGACACTTCCGCTTCTTATaGACCTGCTTCTTTTTATCA | + |
|
Preference number: 4 (lower is better) Translates to: IYAGIQILLAPNPRLDTRHFRFL*TCFFLS Trigger: TGATAAAAAGAAGCAGGTTCATAAGAAGCGGAAGTG...TCTGGTGTCCAGTCTAGGGTTGGGAGCAAGAAGTATTTGAATACCTGCATATAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000368892.9 |
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| CDS-3UTR GCA 90 bp | ATATATGCAGGTATTCAAATACTTCTTGCTCCCAACCCTAGACTGGACACCAGACCATTCCTCGAAAGTTaGATCATCACTAAAAGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: IYAGIQILLAPNPRLDTRPFLES*IITKSD Trigger: ATCACTTTTAGTGATGATGCAACTTTCGAGGAATGG...TCTGGTGTCCAGTCTAGGGTTGGGAGCAAGAAGTATTTGAATACCTGCATATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368892.9 |
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| CDS CCA 90 bp | TTGGCCTCCCGGAGCAGTTCCTCCTGGGTTAGTGGCCGCTCACAGTaGGGCCCCTTTCGCCGTCTTGACTGGCCCTGCCTCTCCTGTACC | + |
|
Preference number: 5 (lower is better) Translates to: LASRSSSSWVSGRSQ*GPFRRLDWPCLSCT Trigger: GGTACAGGAGAGGCAGGGCCAGTCAAGACGGCGAAAGGGGCCCCACTGTGAGCGGCCACTAACCCAGGAGGAACTGCTCCGGGAGGCCAA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000354473.4 ENST00000368892.9 ENST00000496809.5 ENST00000640458.1 |
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| CDS GCA 90 bp | AGTGGCCGCTCACAGTGGGGCCCCTTTCGCCGTCTTGACTGGCCCTaGCTCTCCTGTACCCGAAGGAACGTTTGTCGTGTATGCTCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: SGRSQWGPFRRLDWP*LSCTRRNVCRVCSA Trigger: AGCTGAGCATACACGACAAACGTTCCTTCGGGTACAGGAGAGGCAGGGCCAGTCAAGACGGCGAAAGGGGCCCCACTGTGAGCGGCCACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000354473.4 ENST00000368892.9 ENST00000496809.5 ENST00000640458.1 |
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| CDS CCA 90 bp | TGGGTTAGTGGCCGCTCACAGTGGGGCCCCTTTCGCCGTCTTGACTaGCCCTGCCTCTCCTGTACCCGAAGGAACGTTTGTCGTGTATGC | + |
|
Preference number: 5 (lower is better) Translates to: WVSGRSQWGPFRRLD*PCLSCTRRNVCRVC Trigger: GCATACACGACAAACGTTCCTTCGGGTACAGGAGAGGCAGGGCCAGTCAAGACGGCGAAAGGGGCCCCACTGTGAGCGGCCACTAACCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000354473.4 ENST00000368892.9 ENST00000496809.5 ENST00000640458.1 |
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| CDS CCA 90 bp | AAATTAAGCTCTTCTGTGATCTTGGCCTCCCGGAGCAGTTCCTCCTaGGTTAGTGGCCGCTCACAGTGGGGCCCCTTTCGCCGTCTTGAC | + |
|
Preference number: 5 (lower is better) Translates to: KLSSSVILASRSSSS*VSGRSQWGPFRRLD Trigger: GTCAAGACGGCGAAAGGGGCCCCACTGTGAGCGGCCACTAACCCAGGAGGAACTGCTCCGGGAGGCCAAGATCACAGAAGAGCTTAATTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000354473.4 ENST00000368892.9 ENST00000496809.5 ENST00000640458.1 |
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| CDS-3UTR CAA 90 bp | AGAAGCAGGGAGAAGAAACGGAACAGCAAGAGCCCCAATCAGGGCAGGAAAGAAGCCCCTTTCGCCGTCTaGACTGGCCCTGCCTCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: RSREKKRNSKSPNQGRKEAPFAV*TGPASP Trigger: AGGAGAGGCAGGGCCAGTCAAGACGGCGAAAGGGGC...TTCTTTCCTGCCCTGATTGGGGCTCTTGCTGTTCCGTTTCTTCTCCCTGCTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000354473.4 ENST00000368892.9 |
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| CDS GCA 90 bp | TGTGAAACCCCCATAAGTCGTCTGGTAGAACTCATCTTCCTCCTCTaGCTCCAAAAGCCCAGAAAGCCGGTTCCCAGCGGTCTTCCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: CETPISRLVELIFLL*LQKPRKPVPSGLPG Trigger: CCCCGGAAGACCGCTGGGAACCGGCTTTCTGGGCTTTTGGAGGCAGAGGAGGAAGATGAGTTCTACCAGACGACTTATGGGGGTTTCACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000354473.4 ENST00000368892.9 ENST00000471423.1 ENST00000640458.1 |
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| CDS-3UTR CAA 90 bp | AGAAGAAACGGAACAGCAAGAGCCCCAATCAGGGCAGGAAAGAAGTTTCTGAGGGCCCCTTTCGCCGTCTaGACTGGCCCTGCCTCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: RRNGTARAPIRAGKKFLRAPFAV*TGPASP Trigger: AGGAGAGGCAGGGCCAGTCAAGACGGCGAAAGGGGC...CCTCAGAAACTTCTTTCCTGCCCTGATTGGGGCTCTTGCTGTTCCGTTTCTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000354473.4 ENST00000368892.9 |
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| CDS-3UTR CAA 90 bp | AAGCAGGGAGAAGAAACGGAACAGCAAGAGCCCCAATCAGGGCAGGAAAGAAGTCTACCAGCCGGGGTGTaGACCTTTCGAGGCCTTAAG | + |
|
Preference number: 5 (lower is better) Translates to: KQGEETEQQEPQSGQERSLPAGV*TFRGLK Trigger: CTTAAGGCCTCGAAAGGTCAACACCCCGGCTGGTAG...ACTTCTTTCCTGCCCTGATTGGGGCTCTTGCTGTTCCGTTTCTTCTCCCTGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000354473.4 ENST00000368892.9 |
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| CDS-3UTR CAA 90 bp | AGCAGGGAGAAGAAACGGAACAGCAAGAGCCCCAATCAGGGCAGGAAAGAAGTTTCAACGTTCTCTTCCTaGGGGCCTGGCTCCCCAACA | + |
|
Preference number: 5 (lower is better) Translates to: SREKKRNSKSPNQGRKEVSTFSS*GPGSPT Trigger: TGTTGGGGAGCCAGGCCCCAAGGAAGAGAACGTTGA...AACTTCTTTCCTGCCCTGATTGGGGCTCTTGCTGTTCCGTTTCTTCTCCCTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000354473.4 ENST00000368892.9 |
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| CDS-3UTR CAA 90 bp | AGAAGAAACGGAACAGCAAGAGCCCCAATCAGGGCAGGAAAGAAGTTTCTGAGGCTCACCAGCTCGGTTTaGGGAGCTCGACGCTCGACA | + |
|
Preference number: 5 (lower is better) Translates to: RRNGTARAPIRAGKKFLRLTSSV*GARRST Trigger: TGTCGAGCGTCGAGCTCCCAAAACCGAGCTGGTGAG...CCTCAGAAACTTCTTTCCTGCCCTGATTGGGGCTCTTGCTGTTCCGTTTCTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368892.9 |
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| CDS TCA 90 bp | TCTTGTAGTTCTAATGGCAGTAGTGCCTTCTCTTCTCGCGCCTTCTaGGAGCTACCAGCCGGGGTGTTGACCTTTCGAGGCCTTAAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: SCSSNGSSAFSSRAF*ELPAGVLTFRGLKL Trigger: GAGCTTAAGGCCTCGAAAGGTCAACACCCCGGCTGGTAGCTCTCAGAAGGCGCGAGAAGAGAAGGCACTACTGCCATTAGAACTACAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000354473.4 ENST00000368892.9 ENST00000496809.5 ENST00000640458.1 |
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| CDS-3UTR CAA 90 bp | GAGAAGAAACGGAACAGCAAGAGCCCCAATCAGGGCAGGAAAGAAGTTTCTGAGCTACCAGCCGGGGTGTaGACCTTTCGAGGCCTTAAG | + |
|
Preference number: 5 (lower is better) Translates to: EKKRNSKSPNQGRKEVSELPAGV*TFRGLK Trigger: CTTAAGGCCTCGAAAGGTCAACACCCCGGCTGGTAG...CTCAGAAACTTCTTTCCTGCCCTGATTGGGGCTCTTGCTGTTCCGTTTCTTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000354473.4 ENST00000368892.9 |
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| CDS-3UTR CAA 90 bp | GAGAAGAAACGGAACAGCAAGAGCCCCAATCAGGGCAGGAAAGAAGTTTCTGAGAGCTCTTCTGTGATCTaGGCCTCCCGGAGCAGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: EKKRNSKSPNQGRKEVSESSSVI*ASRSSS Trigger: GGAACTGCTCCGGGAGGCCAAGATCACAGAAGAGCT...CTCAGAAACTTCTTTCCTGCCCTGATTGGGGCTCTTGCTGTTCCGTTTCTTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000354473.4 ENST00000368892.9 |
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| CDS-3UTR CAA 90 bp | AGAAGCAGGGAGAAGAAACGGAACAGCAAGAGCCCCAATCAGGGCAGGAAAGAAGCCTCACGAATGATCTaGAAGGCTCGAGCAGTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: RSREKKRNSKSPNQGRKEASRMI*KARAVA Trigger: TGCCACTGCTCGAGCCTTCAAGATCATTCGTGAGGC...TTCTTTCCTGCCCTGATTGGGGCTCTTGCTGTTCCGTTTCTTCTCCCTGCTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000354473.4 ENST00000368892.9 |
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| CDS TCA 90 bp | GCCGGGGTGTTGACCTTTCGAGGCCTTAAGCTCTTGAGAGGTTCCTaGGGACAGATTGGAATCAGATACTGGGGAACAGAAGAAGTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: AGVLTFRGLKLLRGS*GQIGIRYWGTEEVR Trigger: CCTGACTTCTTCTGTTCCCCAGTATCTGATTCCAATCTGTCCTCAGGAACCTCTCAAGAGCTTAAGGCCTCGAAAGGTCAACACCCCGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000471423.1 |
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| CDS TCA 90 bp | CCCTTCATCAATGTCAAAGTCAGAGTCCACTTCGTCCTCTGTGTCTaGCTGGTCCCCTTGATACTCATCATCTCCGGATTCCGCCTACCG | + |
|
Preference number: 5 (lower is better) Translates to: PFINVKVRVHFVLCV*LVPLILIISGFRLP Trigger: CGGTAGGCGGAATCCGGAGATGATGAGTATCAAGGGGACCAGTCAGACACAGAGGACGAAGTGGACTCTGACTTTGACATTGATGAAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000496809.5 |
||
| CDS-3UTR CAA 90 bp | AGGGAGAAGAAACGGAACAGCAAGAGCCCCAATCAGGGCAGGAAAGAAGTTTCTCTCGGCGCTTCCTTCTaGGCTCTTCTGCTTCTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: REKKRNSKSPNQGRKEVSLGASF*ALLLLH Trigger: ATGGAGAAGCAGAAGAGCCAAGAAGGAAGCGCCGAG...AGAAACTTCTTTCCTGCCCTGATTGGGGCTCTTGCTGTTCCGTTTCTTCTCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000354473.4 ENST00000368892.9 |
||
| CDS-3UTR CAA 90 bp | GAGAAGAAACGGAACAGCAAGAGCCCCAATCAGGGCAGGAAAGAAGTTTCTGAGCTCGGCGCTTCCTTCTaGGCTCTTCTGCTTCTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: EKKRNSKSPNQGRKEVSELGASF*ALLLLH Trigger: ATGGAGAAGCAGAAGAGCCAAGAAGGAAGCGCCGAG...CTCAGAAACTTCTTTCCTGCCCTGATTGGGGCTCTTGCTGTTCCGTTTCTTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000354473.4 ENST00000368892.9 |
||
| CDS-3UTR CAA 90 bp | AGAAGAAACGGAACAGCAAGAGCCCCAATCAGGGCAGGAAAGAAGTTTCTGAGGGCCTCACGAATGATCTaGAAGGCTCGAGCAGTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: RRNGTARAPIRAGKKFLRASRMI*KARAVA Trigger: TGCCACTGCTCGAGCCTTCAAGATCATTCGTGAGGC...CCTCAGAAACTTCTTTCCTGCCCTGATTGGGGCTCTTGCTGTTCCGTTTCTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000354473.4 ENST00000368892.9 |
||
| CDS TCA 90 bp | AAATCCAAGACAACTAGGACTCCCCCTGTACCTTATAGGCCTTGGTaGCTACTCGGCGCTTCCTTCTTGGCTCTTCTGCTTCTCCATCAC | + |
|
Preference number: 5 (lower is better) Translates to: KSKTTRTPPVPYRPW*LLGASFLALLLLHH Trigger: GTGATGGAGAAGCAGAAGAGCCAAGAAGGAAGCGCCGAGTAGTCACCAAGGCCTATAAGGTACAGGGGGAGTCCTAGTTGTCTTGGATTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000471423.1 |
||
| CDS CCA 90 bp | TACTCGGCGCTTCCTTCTTGGCTCTTCTGCTTCTCCATCACTGGATaGTTCATCCCCTTCATCAATGTCAAAGTCAGAGTCCACTTCGTC | + |
|
Preference number: 5 (lower is better) Translates to: YSALPSWLFCFSITG*FIPFINVKVRVHFV Trigger: GACGAAGTGGACTCTGACTTTGACATTGATGAAGGGGATGAACCATCCAGTGATGGAGAAGCAGAAGAGCCAAGAAGGAAGCGCCGAGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000354473.4 ENST00000368892.9 ENST00000463470.1 ENST00000471423.1 ENST00000496809.5 ENST00000640458.1 |
||
| CDS-3UTR CAA 90 bp | AACGGAACAGCAAGAGCCCCAATCAGGGCAGGAAAGAAGTTTCTGAGGACTAGATACCCGAAGGAACGTTaGTCGTGTATGCTCAGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: NGTARAPIRAGKKFLRTRYPKER*SCMLSC Trigger: ACAGCTGAGCATACACGACAAACGTTCCTTCGGGTA...TCTAGTCCTCAGAAACTTCTTTCCTGCCCTGATTGGGGCTCTTGCTGTTCCGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000354473.4 ENST00000368892.9 |
||
| CDS TCA 90 bp | CCCTTCATCAATGTCAAAGTCAGAGTCCACTTCGTCCTCTGTGTCTaGCTGGTCCCCTTGATACTCATCATCTCCGGATTCCTCTGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: PFINVKVRVHFVLCV*LVPLILIISGFLCE Trigger: TTCACAGAGGAATCCGGAGATGATGAGTATCAAGGGGACCAGTCAGACACAGAGGACGAAGTGGACTCTGACTTTGACATTGATGAAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000354473.4 ENST00000368892.9 ENST00000471423.1 ENST00000640458.1 |
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| CDS GCA 90 bp | CTTATAGGCCTTGGTGACTACTCGGCGCTTCCTTCTTGGCTCTTCTaGTTCTCCATCACTGGATGGTTCATCCCCTTCATCAATGTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: LIGLGDYSALPSWLF*FSITGWFIPFINVK Trigger: TTTGACATTGATGAAGGGGATGAACCATCCAGTGATGGAGAAGCAGAAGAGCCAAGAAGGAAGCGCCGAGTAGTCACCAAGGCCTATAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000354473.4 ENST00000368892.9 ENST00000463470.1 ENST00000471423.1 ENST00000496809.5 ENST00000640458.1 |
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| CDS-3UTR CAA 90 bp | ATATATGCAGGTATTCAAATACTTCTTGCTCCCAACCCTAGACTGGACACCAGAAGCTCTTCTGTGATCTaGGCCTCCCGGAGCAGTTCC | + |
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Preference number: 5 (lower is better) Translates to: IYAGIQILLAPNPRLDTRSSSVI*ASRSSS Trigger: GGAACTGCTCCGGGAGGCCAAGATCACAGAAGAGCT...TCTGGTGTCCAGTCTAGGGTTGGGAGCAAGAAGTATTTGAATACCTGCATATAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368892.9 |
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| CDS-3UTR CAA 90 bp | ATATATGCAGGTATTCAAATACTTCTTGCTCCCAACCCTAGACTGGACACCAGATCAACGTTCTCTTCCTaGGGGCCTGGCTCCCCAACA | + |
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Preference number: 5 (lower is better) Translates to: IYAGIQILLAPNPRLDTRSTFSS*GPGSPT Trigger: TGTTGGGGAGCCAGGCCCCAAGGAAGAGAACGTTGA...TCTGGTGTCCAGTCTAGGGTTGGGAGCAAGAAGTATTTGAATACCTGCATATAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368892.9 |
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| CDS TCA 90 bp | TCAAAGTCAGAGTCCACTTCGTCCTCTGTGTCTGACTGGTCCCCTTaGTACTCATCATCTCCGGATTCATGTACTGAAGTCTGTACCTGT | + |
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Preference number: 5 (lower is better) Translates to: SKSESTSSSVSDWSP*YSSSPDSCTEVCTC Trigger: ACAGGTACAGACTTCAGTACATGAATCCGGAGATGATGAGTATCAAGGGGACCAGTCAGACACAGAGGACGAAGTGGACTCTGACTTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000463470.1 |
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| CDS-3UTR CAA 90 bp | AGAAGAAACGGAACAGCAAGAGCCCCAATCAGGGCAGGAAAGAAGTTTCTGAGGGTATTCAAATACTTCTaGCTCCCAACCCTAGACTGG | + |
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Preference number: 5 (lower is better) Translates to: RRNGTARAPIRAGKKFLRVFKYF*LPTLDW Trigger: CCAGTCTAGGGTTGGGAGCAAGAAGTATTTGAATAC...CCTCAGAAACTTCTTTCCTGCCCTGATTGGGGCTCTTGCTGTTCCGTTTCTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368892.9 |
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| CDS GCA 72 bp | AAGCCCAGAAAGCCGGTTCCCAGCGGTCTTCCGGGGTaGCCGGCCCCCAGCCAAACTCATACCGCCTACCGA | + |
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Preference number: 6 (lower is better) Translates to: KPRKPVPSGLPG*PAPSQTHTAYR Trigger: TCGGTAGGCGGTATGAGTTTGGCTGGGGGCCGGGCACCCCGGAAGACCGCTGGGAACCGGCTTTCTGGGCTT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000354473.4 ENST00000368892.9 ENST00000471423.1 ENST00000640458.1 |
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| CDS CCA 72 bp | CGGAGCAGTTCCTCCTGGGTTAGTGGCCGCTCACAGTaGGGCCCCTTTCGCCGTCTTGACTGGCCCTGCCTC | + |
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Preference number: 6 (lower is better) Translates to: RSSSSWVSGRSQ*GPFRRLDWPCL Trigger: GAGGCAGGGCCAGTCAAGACGGCGAAAGGGGCCCCACTGTGAGCGGCCACTAACCCAGGAGGAACTGCTCCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000354473.4 ENST00000368892.9 ENST00000496809.5 ENST00000640458.1 |
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| CDS CCA 72 bp | TGCGCCGCCACCTGCAGCCCCTCACCAGCTCGGTTTTaGGAGCTCGACGCTCGACATCACTACCTGCGGGTG | + |
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Preference number: 6 (lower is better) Translates to: CAATCSPSPARF*ELDARHHYLRV Trigger: CACCCGCAGGTAGTGATGTCGAGCGTCGAGCTCCCAAAACCGAGCTGGTGAGGGGCTGCAGGTGGCGGCGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000640458.1 |
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| CDS CAA 72 bp | CTGCGCCGCCACCTGCAGCCCCTCACCAGCTCGGTTTaGGGAGCTCGACGCTCGACATCACTACCTGCGGGT | + |
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Preference number: 6 (lower is better) Translates to: LRRHLQPLTSSV*GARRSTSLPAG Trigger: ACCCGCAGGTAGTGATGTCGAGCGTCGAGCTCCCAAAACCGAGCTGGTGAGGGGCTGCAGGTGGCGGCGCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000640458.1 |
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| CDS GCA 72 bp | CAAACTCATACCGCCTACCGAGACTGCGCCGCCACCTaGAGCCCCTCACCAGCTCGGTTTTGGGAGCTCGAC | + |
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Preference number: 6 (lower is better) Translates to: QTHTAYRDCAAT*SPSPARFWELD Trigger: GTCGAGCTCCCAAAACCGAGCTGGTGAGGGGCTGCAGGTGGCGGCGCAGTCTCGGTAGGCGGTATGAGTTTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000368892.9 ENST00000640458.1 |
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| CDS CCA 72 bp | GGCCGCTCACAGTGGGGCCCCTTTCGCCGTCTTGACTaGCCCTGCCTCTCCTGTACCCGAAGGAACGTTTGT | + |
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Preference number: 6 (lower is better) Translates to: GRSQWGPFRRLD*PCLSCTRRNVC Trigger: ACAAACGTTCCTTCGGGTACAGGAGAGGCAGGGCCAGTCAAGACGGCGAAAGGGGCCCCACTGTGAGCGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000354473.4 ENST00000368892.9 ENST00000496809.5 ENST00000640458.1 |
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| CDS CAA 72 bp | TTAGTGGCCGCTCACAGTGGGGCCCCTTTCGCCGTCTaGACTGGCCCTGCCTCTCCTGTACCCGAAGGAACG | + |
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Preference number: 6 (lower is better) Translates to: LVAAHSGAPFAV*TGPASPVPEGT Trigger: CGTTCCTTCGGGTACAGGAGAGGCAGGGCCAGTCAAGACGGCGAAAGGGGCCCCACTGTGAGCGGCCACTAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000354473.4 ENST00000368892.9 ENST00000496809.5 ENST00000640458.1 |
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| CDS CAA 90 bp | CCTCCTGGGTTAGTGGCCGCTCACAGTGGGGCCCCTTTCGCCGTCTaGACTGGCCCTGCCTCTCCTGTACCCGAAGGAACGTTTGTCGTG | + |
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Preference number: 6 (lower is better) Translates to: PPGLVAAHSGAPFAV*TGPASPVPEGTFVV Trigger: CACGACAAACGTTCCTTCGGGTACAGGAGAGGCAGGGCCAGTCAAGACGGCGAAAGGGGCCCCACTGTGAGCGGCCACTAACCCAGGAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000354473.4 ENST00000368892.9 ENST00000496809.5 ENST00000640458.1 |
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| CDS CCA 72 bp | TCTTCTGTGATCTTGGCCTCCCGGAGCAGTTCCTCCTaGGTTAGTGGCCGCTCACAGTGGGGCCCCTTTCGC | + |
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Preference number: 6 (lower is better) Translates to: SSVILASRSSSS*VSGRSQWGPFR Trigger: GCGAAAGGGGCCCCACTGTGAGCGGCCACTAACCCAGGAGGAACTGCTCCGGGAGGCCAAGATCACAGAAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000354473.4 ENST00000368892.9 ENST00000496809.5 ENST00000640458.1 |
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| CDS GCA 72 bp | TCACAGTGGGGCCCCTTTCGCCGTCTTGACTGGCCCTaGCTCTCCTGTACCCGAAGGAACGTTTGTCGTGTA | + |
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Preference number: 6 (lower is better) Translates to: SQWGPFRRLDWP*LSCTRRNVCRV Trigger: TACACGACAAACGTTCCTTCGGGTACAGGAGAGGCAGGGCCAGTCAAGACGGCGAAAGGGGCCCCACTGTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000354473.4 ENST00000368892.9 ENST00000496809.5 ENST00000640458.1 |
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| CDS GCA 72 bp | GGGGTTGACGGGTCCAGTCCCAGCATGAGGAGTCAATaGAGACACCGAGGGAGCAGGATCAAGTCTGAGGAC | + |
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Preference number: 6 (lower is better) Translates to: GVDGSSPSMRSQ*RHRGSRIKSED Trigger: GTCCTCAGACTTGATCCTGCTCCCTCGGTGTCTGCATTGACTCCTCATGCTGGGACTGGACCCGTCAACCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000354473.4 |
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| CDS CAA 90 bp | GGGCTGGACGATGGGTCACTGGACAGACCTCACGAACAGGGACTTTaGGGGGCCGCCCTTGGGGGAACCATTCCTCGAAAGTTGCATCAT | + |
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Preference number: 6 (lower is better) Translates to: GLDDGSLDRPHEQGL*GAALGGTIPRKLHH Trigger: ATGATGCAACTTTCGAGGAATGGTTCCCCCAAGGGCGGCCCCCAAAAGTCCCTGTTCGTGAGGTCTGTCCAGTGACCCATCGTCCAGCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000354473.4 ENST00000368892.9 ENST00000496809.5 |
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| CDS CAA 90 bp | GCCCTTGGGGGAACCAGTGACCGTAAATTAAGCTCTTCTGTGATCTaGGCCTCCCGGAGCAGTTCCTCCTGGGTTAGTGGCCGCTCACAG | + |
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Preference number: 6 (lower is better) Translates to: ALGGTSDRKLSSSVI*ASRSSSSWVSGRSQ Trigger: CTGTGAGCGGCCACTAACCCAGGAGGAACTGCTCCGGGAGGCCAAGATCACAGAAGAGCTTAATTTACGGTCACTGGTTCCCCCAAGGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000640458.1 |
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| CDS TCA 72 bp | TCTAATGGCAGTAGTGCCTTCTCTTCTCGCGCCTTCTaGGAGCTACCAGCCGGGGTGTTGACCTTTCGAGGC | + |
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Preference number: 6 (lower is better) Translates to: SNGSSAFSSRAF*ELPAGVLTFRG Trigger: GCCTCGAAAGGTCAACACCCCGGCTGGTAGCTCTCAGAAGGCGCGAGAAGAGAAGGCACTACTGCCATTAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000354473.4 ENST00000368892.9 ENST00000471423.1 ENST00000496809.5 ENST00000640458.1 |
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| CDS GCA 72 bp | GGGGTTGACGGGTCCAGTCCCAGCATGAGGAGTCAATaGAGACACCGAGGGAGCAGGATCAAGTCCTTCTAT | + |
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Preference number: 6 (lower is better) Translates to: GVDGSSPSMRSQ*RHRGSRIKSFY Trigger: ATAGAAGGACTTGATCCTGCTCCCTCGGTGTCTGCATTGACTCCTCATGCTGGGACTGGACCCGTCAACCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000368892.9 ENST00000496809.5 |
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| CDS TCA 72 bp | GAGTCCACTTCGTCCTCTGTGTCTGACTGGTCCCCTTaGTACTCATCATCTCCGGATTCCGCCTACCGAGAC | + |
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Preference number: 6 (lower is better) Translates to: ESTSSSVSDWSP*YSSSPDSAYRD Trigger: GTCTCGGTAGGCGGAATCCGGAGATGATGAGTATCAAGGGGACCAGTCAGACACAGAGGACGAAGTGGACTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000496809.5 |
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| CDS GCA 72 bp | CCCATAAGTCGTCTGGTAGAACTCATCTTCCTCCTCTaGCTCCAAAAGCCCAGAAAGCCGGTTCCCAGCGGT | + |
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Preference number: 6 (lower is better) Translates to: PISRLVELIFLL*LQKPRKPVPSG Trigger: ACCGCTGGGAACCGGCTTTCTGGGCTTTTGGAGGCAGAGGAGGAAGATGAGTTCTACCAGACGACTTATGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000354473.4 ENST00000368892.9 ENST00000471423.1 ENST00000640458.1 |
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| CDS CAA 90 bp | CGCTCATATGTCTCCAGTGACCGTAAATTAAGCTCTTCTGTGATCTaGGCCTCCCGGAGCAGTTCCTCCTGGGTTAGTGGCCGCTCACAG | + |
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Preference number: 6 (lower is better) Translates to: RSYVSSDRKLSSSVI*ASRSSSSWVSGRSQ Trigger: CTGTGAGCGGCCACTAACCCAGGAGGAACTGCTCCGGGAGGCCAAGATCACAGAAGAGCTTAATTTACGGTCACTGGAGACATATGAGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000354473.4 ENST00000368892.9 ENST00000496809.5 |
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| CDS CCA 72 bp | ATGTCTGTAACAGGGTCCCGGTATAGGGCTGGACGATaGGTCACTGGACAGACCTCACGAACAGGGACTTTT | + |
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Preference number: 6 (lower is better) Translates to: MSVTGSRYRAGR*VTGQTSRTGTF Trigger: AAAAGTCCCTGTTCGTGAGGTCTGTCCAGTGACCCATCGTCCAGCCCTATACCGGGACCCTGTTACAGACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000354473.4 ENST00000368892.9 ENST00000496809.5 |
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| CDS CAA 72 bp | GTCTCCAGTGACCGTAAATTAAGCTCTTCTGTGATCTaGGCCTCCCGGAGCAGTTCCTCCTGGGTTAGTGGC | + |
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Preference number: 6 (lower is better) Translates to: VSSDRKLSSSVI*ASRSSSSWVSG Trigger: GCCACTAACCCAGGAGGAACTGCTCCGGGAGGCCAAGATCACAGAAGAGCTTAATTTACGGTCACTGGAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000354473.4 ENST00000368892.9 ENST00000496809.5 |
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| CDS CAA 72 bp | GCAGGATCAAGTCCTTCTATGTCAACGTTCTCTTCCTaGGGGCCTGGCTCCCCAACAAGTGGCACTGTCACT | + |
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Preference number: 6 (lower is better) Translates to: AGSSPSMSTFSS*GPGSPTSGTVT Trigger: AGTGACAGTGCCACTTGTTGGGGAGCCAGGCCCCAAGGAAGAGAACGTTGACATAGAAGGACTTGATCCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000368892.9 ENST00000496809.5 |
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| CDS CAA 72 bp | GGAACCAGTGACCGTAAATTAAGCTCTTCTGTGATCTaGGCCTCCCGGAGCAGTTCCTCCTGGGTTAGTGGC | + |
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Preference number: 6 (lower is better) Translates to: GTSDRKLSSSVI*ASRSSSSWVSG Trigger: GCCACTAACCCAGGAGGAACTGCTCCGGGAGGCCAAGATCACAGAAGAGCTTAATTTACGGTCACTGGTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000640458.1 |
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| CDS TCA 72 bp | GAGTCCACTTCGTCCTCTGTGTCTGACTGGTCCCCTTaGTACTCATCATCTCCGGATTCCTCTGTGAAACCC | + |
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Preference number: 6 (lower is better) Translates to: ESTSSSVSDWSP*YSSSPDSSVKP Trigger: GGGTTTCACAGAGGAATCCGGAGATGATGAGTATCAAGGGGACCAGTCAGACACAGAGGACGAAGTGGACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000354473.4 ENST00000368892.9 ENST00000471423.1 ENST00000640458.1 |
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| CDS TCA 72 bp | GCTCCCCAACAAGTGGCACTGTCACTGAATGATAGGTaGTTATGGGCCCGGGGCACTTCCGCTTCTTATGAA | + |
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Preference number: 6 (lower is better) Translates to: APQQVALSLNDR*LWARGTSASYE Trigger: TTCATAAGAAGCGGAAGTGCCCCGGGCCCATAATCACCTATCATTCAGTGACAGTGCCACTTGTTGGGGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000354473.4 ENST00000368892.9 ENST00000496809.5 |
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| CDS TCA 72 bp | ACAACTAGGACTCCCCCTGTACCTTATAGGCCTTGGTaGCTACTCGGCGCTTCCTTCTTGGCTCTTCTGCTT | + |
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Preference number: 6 (lower is better) Translates to: TTRTPPVPYRPW*LLGASFLALLL Trigger: AAGCAGAAGAGCCAAGAAGGAAGCGCCGAGTAGTCACCAAGGCCTATAAGGTACAGGGGGAGTCCTAGTTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000471423.1 |
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| CDS GCA 72 bp | CTTGGTGACTACTCGGCGCTTCCTTCTTGGCTCTTCTaGTTCTCCATCACTGGATGGTTCATCCCCTTCATC | + |
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Preference number: 6 (lower is better) Translates to: LGDYSALPSWLF*FSITGWFIPFI Trigger: GATGAAGGGGATGAACCATCCAGTGATGGAGAAGCAGAAGAGCCAAGAAGGAAGCGCCGAGTAGTCACCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000354473.4 ENST00000368892.9 ENST00000463470.1 ENST00000471423.1 ENST00000496809.5 ENST00000640458.1 |
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| CDS TCA 72 bp | CGAAGGAACGTTTGTCGTGTATGCTCAGCTGTAGACTaGCGCATAGACTTCCGACTGTCAGAGCCGTCATCT | + |
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Preference number: 6 (lower is better) Translates to: RRNVCRVCSAVD*RIDFRLSEPSS Trigger: AGATGACGGCTCTGACAGTCGGAAGTCTATGCGTCAGTCTACAGCTGAGCATACACGACAAACGTTCCTTCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000354473.4 ENST00000368892.9 ENST00000496809.5 ENST00000640458.1 |
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| CDS CAA 72 bp | AAACACAAAGAGCCTTCTATGTCAACGTTCTCTTCCTaGGGGCCTGGCTCCCCAACAAGTGGCACTGTCACT | + |
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Preference number: 6 (lower is better) Translates to: KHKEPSMSTFSS*GPGSPTSGTVT Trigger: AGTGACAGTGCCACTTGTTGGGGAGCCAGGCCCCAAGGAAGAGAACGTTGACATAGAAGGCTCTTTGTGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000354473.4 |
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| CDS TCA 72 bp | GAGTCCACTTCGTCCTCTGTGTCTGACTGGTCCCCTTaGTACTCATCATCTCCGGATTCATGTACTGAAGTC | + |
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Preference number: 6 (lower is better) Translates to: ESTSSSVSDWSP*YSSSPDSCTEV Trigger: GACTTCAGTACATGAATCCGGAGATGATGAGTATCAAGGGGACCAGTCAGACACAGAGGACGAAGTGGACTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000463470.1 |
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| CDS TCA 72 bp | AATGTCAAAGTCAGAGTCCACTTCGTCCTCTGTGTCTaGCTGGTCCCCTTGATACTCATCATCTCCGGATTC | + |
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Preference number: 6 (lower is better) Translates to: NVKVRVHFVLCV*LVPLILIISGF Trigger: GAATCCGGAGATGATGAGTATCAAGGGGACCAGTCAGACACAGAGGACGAAGTGGACTCTGACTTTGACATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000354473.4 ENST00000368892.9 ENST00000463470.1 ENST00000471423.1 ENST00000496809.5 ENST00000640458.1 |
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| CDS TCA 72 bp | TTGACCTTTCGAGGCCTTAAGCTCTTGAGAGGTTCCTaGGGACAGATTGGAATCAGATACTGGGGAACAGAA | + |
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Preference number: 6 (lower is better) Translates to: LTFRGLKLLRGS*GQIGIRYWGTE Trigger: TTCTGTTCCCCAGTATCTGATTCCAATCTGTCCTCAGGAACCTCTCAAGAGCTTAAGGCCTCGAAAGGTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471423.1 |
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