RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for VPS51 (Homo sapiens)

Ensembl gene IDs: ENSG00000149823

Ensembl transcript IDs: ENST00000279281.8, ENST00000526578.5, ENST00000526856.5, ENST00000527646.5, ENST00000528588.5, ENST00000529180.1, ENST00000530673.1, ENST00000530773.5, ENST00000531146.1, ENST00000533487.1, ENST00000533656.1, ENST00000533827.5, ENST00000534124.5, ENST00000534557.1, ENST00000534591.1

Found 347 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGGTCAGCAGCCGCCGCGCCGTTTCCCTGGCCTCTGCACACAGCGTaGTCACGGGCGTCACTGGGAACTGATCAGGCAGCTGGTCTGGGG +
Preference number: 1 (lower is better)
Translates to: GSAAAAPFPWPLHTA*SRASLGTDQAAGLG
Trigger: CCCCAGACCAGCTGCCTGATCAGTTCCCAGTGACGCCCGTGAGCACGCTGTGTGCAGAGGCCAGGGAAACGGCGCGGCGGCTGCTGACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533827.5
3UTR CCA 90 bp CGCAGCTGCTGGGCCAGGCGGGCCGTGATGACCTGGCAGTCGTCCTaGATGGCGCGGAACGAGGGCAGGTGTTGGTACTGCTGCAGCACG +
Preference number: 1 (lower is better)
Translates to: RSCWARRAVMTWQSS*MARNEGRCWYCCST
Trigger: CGTGCTGCAGCAGTACCAACACCTGCCCTCGTTCCGCGCCATCCAGGACGACTGCCAGGTCATCACGGCCCGCCTGGCCCAGCAGCTGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533487.1
ENST00000534124.5
3UTR CCA 90 bp ACCTGCCTGCGGGGAAGGACCACCGAGACCAGATCCTGGGTGCCATaGGGTGCAGGGACAGACCGGTGCATGGCAGCGGCTGCGCCTAGC +
Preference number: 1 (lower is better)
Translates to: TCLRGRTTETRSWVP*GAGTDRCMAAAAPS
Trigger: GCTAGGCGCAGCCGCTGCCATGCACCGGTCTGTCCCTGCACCCCATGGCACCCAGGATCTGGTCTCGGTGGTCCTTCCCCGCAGGCAGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530673.1
ENST00000533827.5
3UTR TCA 90 bp ACAGACCGGTGCATGGCAGCGGCTGCGCCTAGCCGCGCTCGCAGATaGCCTCAACCACACTGGGCTCCATGGGCACAGGGTCTGGGCAGC +
Preference number: 1 (lower is better)
Translates to: TDRCMAAAAPSRARR*PQPHWAPWAQGLGS
Trigger: GCTGCCCAGACCCTGTGCCCATGGAGCCCAGTGTGGTTGAGGTCATCTGCGAGCGCGGCTAGGCGCAGCCGCTGCCATGCACCGGTCTGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530673.1
ENST00000533827.5
3UTR GCA 90 bp AGCGCGTGGACCCCTGCCAGCTTGGTGATGCGCTCGTGGCGGTCCTaGAGCGTGGCGCTGATGCGAGCGCTGAAGTCGGTGATCACTGCC +
Preference number: 1 (lower is better)
Translates to: SAWTPASLVMRSWRS*SVALMRALKSVITA
Trigger: GGCAGTGATCACCGACTTCAGCGCTCGCATCAGCGCCACGCTGCAGGACCGCCACGAGCGCATCACCAAGCTGGCAGGGGTCCACGCGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533487.1
ENST00000534124.5
3UTR CCA 90 bp AGACCAGATCCTGGGTGCCATGGGGTGCAGGGACAGACCGGTGCATaGCAGCGGCTGCGCCTAGCCGCGCTCGCAGATGACCTCAACCAC +
Preference number: 1 (lower is better)
Translates to: RPDPGCHGVQGQTGA*QRLRLAALADDLNH
Trigger: GTGGTTGAGGTCATCTGCGAGCGCGGCTAGGCGCAGCCGCTGCCATGCACCGGTCTGTCCCTGCACCCCATGGCACCCAGGATCTGGTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530673.1
ENST00000533827.5
3UTR TCA 90 bp GGTAGCGCACCGCCTGCCCATAGGCGCCCAGTTCCACGCACTTGGTaGGGCGCGAGGGCAGCTCAAAGAGGAACTGCAGCTTCCGCAGCA +
Preference number: 1 (lower is better)
Translates to: GSAPPAHRRPVPRTW*GARAAQRGTAASAA
Trigger: TGCTGCGGAAGCTGCAGTTCCTCTTTGAGCTGCCCTCGCGCCTCACCAAGTGCGTGGAACTGGGCGCCTATGGGCAGGCGGTGCGCTACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533487.1
ENST00000534124.5
3UTR CCA 90 bp CCTGCACCTTCACGTAGTGGGTCAGCAGCCGCCGCGCCGTTTCCCTaGCCTCTGCACACAGCGTGCTCACGGGCGTCACTGGGAACTGAT +
Preference number: 1 (lower is better)
Translates to: PAPSRSGSAAAAPFP*PLHTACSRASLGTD
Trigger: ATCAGTTCCCAGTGACGCCCGTGAGCACGCTGTGTGCAGAGGCCAGGGAAACGGCGCGGCGGCTGCTGACCCACTACGTGAAGGTGCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533827.5
3UTR GCA 90 bp CACTGGGGGTATAGCTGGGGGCGTAGCGGCCCTGCTGCCGAGAGCTaGTGTACACGGAGAAAGTCCTCTTGCTGGAGTCGCTGCTCTGGG +
Preference number: 1 (lower is better)
Translates to: HWGYSWGRSGPAAES*CTRRKSSCWSRCSG
Trigger: CCCAGAGCAGCGACTCCAGCAAGAGGACTTTCTCCGTGTACAGCAGCTCTCGGCAGCAGGGCCGCTACGCCCCCAGCTATACCCCCAGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000533827.5
3UTR GCA 90 bp AGTTCCACGCACTTGGTGAGGCGCGAGGGCAGCTCAAAGAGGAACTaGAGCTTCCGCAGCAGCGCGTGGACCCCTGCCAGCTTGGTGATG +
Preference number: 1 (lower is better)
Translates to: SSTHLVRREGSSKRN*SFRSSAWTPASLVM
Trigger: CATCACCAAGCTGGCAGGGGTCCACGCGCTGCTGCGGAAGCTGCAGTTCCTCTTTGAGCTGCCCTCGCGCCTCACCAAGTGCGTGGAACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533487.1
ENST00000534124.5
3UTR GCA 90 bp AGGAGGAGGCCACACATGTTTATTAGGCCGGTCCTGACACCTGCCTaGGGGGAAGGACCACCGAGACCAGATCCTGGGTGCCATGGGGTG +
Preference number: 1 (lower is better)
Translates to: RRRPHMFIRPVLTPA*GEGPPRPDPGCHGV
Trigger: CACCCCATGGCACCCAGGATCTGGTCTCGGTGGTCCTTCCCCGCAGGCAGGTGTCAGGACCGGCCTAATAAACATGTGTGGCCTCCTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000279281.8
3UTR GCA 90 bp GTCCTGCAGCGTGGCGCTGATGCGAGCGCTGAAGTCGGTGATCACTaGCATGTTGGTGGCCAGCCGGTCCATCTCATCCTCCATCTTCCG +
Preference number: 1 (lower is better)
Translates to: VLQRGADASAEVGDH*HVGGQPVHLILHLP
Trigger: CGGAAGATGGAGGATGAGATGGACCGGCTGGCCACCAACATGGCAGTGATCACCGACTTCAGCGCTCGCATCAGCGCCACGCTGCAGGAC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533487.1
ENST00000534124.5
3UTR TCA 90 bp CAGCAAGCGAGAGGAGGAGGCCACACATGTTTATTAGGCCGGTCCTaGCACCTGCCTGCGGGGAAGGACCACCGAGACCAGATCCTGGGT +
Preference number: 1 (lower is better)
Translates to: QQARGGGHTCLLGRS*HLPAGKDHRDQILG
Trigger: ACCCAGGATCTGGTCTCGGTGGTCCTTCCCCGCAGGCAGGTGTCAGGACCGGCCTAATAAACATGTGTGGCCTCCTCCTCTCGCTTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279281.8
3UTR TCA 90 bp AGTGCTGAGCCAGTCGCGAGTCTCCACGCTCTTGCGCAGCATCTGTaGTATGACCAGGCCCTGCACCTTCACGTAGTGGGTCAGCAGCCG +
Preference number: 1 (lower is better)
Translates to: SAEPVASLHALAQHL*YDQALHLHVVGQQP
Trigger: CGGCTGCTGACCCACTACGTGAAGGTGCAGGGCCTGGTCATATCACAGATGCTGCGCAAGAGCGTGGAGACTCGCGACTGGCTCAGCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533827.5
3UTR GCA 90 bp GCCGAGAGCTGCTGTACACGGAGAAAGTCCTCTTGCTGGAGTCGCTaGTCTGGGCCTTGCGAACACCCTCTTCGTACAGGAGCCCCACCT +
Preference number: 1 (lower is better)
Translates to: AESCCTRRKSSCWSR*SGPCEHPLRTGAPP
Trigger: AGGTGGGGCTCCTGTACGAAGAGGGTGTTCGCAAGGCCCAGAGCAGCGACTCCAGCAAGAGGACTTTCTCCGTGTACAGCAGCTCTCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533827.5
3UTR GCA 90 bp AGCGGCCCTGCTGCCGAGAGCTGCTGTACACGGAGAAAGTCCTCTTaGTGGAGTCGCTGCTCTGGGCCTTGCGAACACCCTCTTCGTACA +
Preference number: 1 (lower is better)
Translates to: SGPAAESCCTRRKSS*WSRCSGPCEHPLRT
Trigger: TGTACGAAGAGGGTGTTCGCAAGGCCCAGAGCAGCGACTCCAGCAAGAGGACTTTCTCCGTGTACAGCAGCTCTCGGCAGCAGGGCCGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533827.5
3UTR CCA 90 bp GAGCTGCTGTACACGGAGAAAGTCCTCTTGCTGGAGTCGCTGCTCTaGGCCTTGCGAACACCCTCTTCGTACAGGAGCCCCACCTGCACG +
Preference number: 1 (lower is better)
Translates to: ELLYTEKVLLLESLL*ALRTPSSYRSPTCT
Trigger: CGTGCAGGTGGGGCTCCTGTACGAAGAGGGTGTTCGCAAGGCCCAGAGCAGCGACTCCAGCAAGAGGACTTTCTCCGTGTACAGCAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533827.5
3UTR CCA 90 bp GGCCCTGCTGCCGAGAGCTGCTGTACACGGAGAAAGTCCTCTTGCTaGAGTCGCTGCTCTGGGCCTTGCGAACACCCTCTTCGTACAGGA +
Preference number: 1 (lower is better)
Translates to: GPAAESCCTRRKSSC*SRCSGPCEHPLRTG
Trigger: TCCTGTACGAAGAGGGTGTTCGCAAGGCCCAGAGCAGCGACTCCAGCAAGAGGACTTTCTCCGTGTACAGCAGCTCTCGGCAGCAGGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533827.5
3UTR CCA 90 bp AACTCCACAGGGCTGAACACATCAATACGTTCAGAGAATAGCTTCTaGATATTGCTCAAGAGGTTGGTGTCCATCGGGGCACTGGGGGTA +
Preference number: 1 (lower is better)
Translates to: NSTGLNTSIRSENSF*ILLKRLVSIGALGV
Trigger: TACCCCCAGTGCCCCGATGGACACCAACCTCTTGAGCAATATCCAGAAGCTATTCTCTGAACGTATTGATGTGTTCAGCCCTGTGGAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533827.5
3UTR-3UTR GCA 90 bp CCCAGCACACCAGCCAATCGGCGCTCGGGGGCGGACCCGACGCGGGCGCCTCAGGCCGGTCCTGACACCTaGCTGCGGGGAAGGACCACC +
Preference number: 2 (lower is better)
Translates to: PSTPANRRSGADPTRAPQAGPDT*LRGRTT
Trigger: GGTGGTCCTTCCCCGCAGGCAGGTGTCAGGACCGGC...CTGAGGCGCCCGCGTCGGGTCCGCCCCCGAGCGCCGATTGGCTGGTGTGCTGGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000279281.8
3UTR-3UTR TCA 90 bp TTGGTACTGCTGCAGCACGGCCTGCGCGCGGCCCTGGTAGCGCACCGCCTGCCCCCCCTGCCAGCTTGGTaGTGCGCTCGTGGCGGTCCT +
Preference number: 2 (lower is better)
Translates to: LVLLQHGLRAALVAHRLPPLPAW*CARGGP
Trigger: AGGACCGCCACGAGCGCATCACCAAGCTGGCAGGGG...GGGCAGGCGGTGCGCTACCAGGGCCGCGCGCAGGCCGTGCTGCAGCAGTACCAA
72% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000533487.1
ENST00000534124.5
3UTR-3UTR GCA 90 bp CAGGTGTTGGTACTGCTGCAGCACGGCCTGCGCGCGGCCCTGGTAGCGCACCGCCGCTCGTGGCGGTCCTaGAGCGTGGCGCTGATGCGA +
Preference number: 2 (lower is better)
Translates to: QVLVLLQHGLRAALVAHRRSWRS*SVALMR
Trigger: TCGCATCAGCGCCACGCTGCAGGACCGCCACGAGCG...GCGGTGCGCTACCAGGGCCGCGCGCAGGCCGTGCTGCAGCAGTACCAACACCTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533487.1
ENST00000534124.5
3UTR-3UTR CCA 90 bp CCAATCGGCGCTCGGGGGCGGACCCGACGCGGGCGCCTCAGAAGCCTCAGCTTCAGATCCTGGGTGCCATaGGGTGCAGGGACAGACCGG +
Preference number: 2 (lower is better)
Translates to: PIGARGRTRRGRLRSLSFRSWVP*GAGTDR
Trigger: CCGGTCTGTCCCTGCACCCCATGGCACCCAGGATCT...GAAGCTGAGGCTTCTGAGGCGCCCGCGTCGGGTCCGCCCCCGAGCGCCGATTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000279281.8
3UTR CAA 90 bp GATGACCTGGCAGTCGTCCTGGATGGCGCGGAACGAGGGCAGGTGTaGGTACTGCTGCAGCACGGCCTGCGCGCGGCCCTGGTAGCGCAC +
Preference number: 2 (lower is better)
Translates to: DDLAVVLDGAERGQV*VLLQHGLRAALVAH
Trigger: GTGCGCTACCAGGGCCGCGCGCAGGCCGTGCTGCAGCAGTACCAACACCTGCCCTCGTTCCGCGCCATCCAGGACGACTGCCAGGTCATC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533487.1
ENST00000534124.5
3UTR-3UTR CCA 90 bp CTGGGCCAGGCGGGCCGTGATGACCTGGCAGTCGTCCTGGATGGCGCGGAACGATTGGTGATGCGCTCGTaGCGGTCCTGCAGCGTGGCG +
Preference number: 2 (lower is better)
Translates to: LGQAGRDDLAVVLDGAERLVMRS*RSCSVA
Trigger: CGCCACGCTGCAGGACCGCCACGAGCGCATCACCAA...TCGTTCCGCGCCATCCAGGACGACTGCCAGGTCATCACGGCCCGCCTGGCCCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533487.1
ENST00000534124.5
3UTR-3UTR GCA 90 bp AGGACCACCGAGACCAGATCCTGGGTGCCATGGGGTGCAGGGACAGACCGGTGCAGTGGAACCGCCCCCTaGCCATGCTGGGCCCAGCAC +
Preference number: 2 (lower is better)
Translates to: RTTETRSWVPWGAGTDRCSGTAP*PCWAQH
Trigger: GTGCTGGGCCCAGCATGGGCAGGGGGCGGTTCCACT...GCACCGGTCTGTCCCTGCACCCCATGGCACCCAGGATCTGGTCTCGGTGGTCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000279281.8
3UTR-3UTR CCA 90 bp CAGTCCACTTGCACCTGCTGCAGCCCGAAGCGCCCAAAGGTGCGCAGCCGCACAGCCGCGCCGTTTCCCTaGCCTCTGCACACAGCGTGC +
Preference number: 2 (lower is better)
Translates to: QSTCTCCSPKRPKVRSRTAAPFP*PLHTAC
Trigger: GCACGCTGTGTGCAGAGGCCAGGGAAACGGCGCGGC...TGTGCGGCTGCGCACCTTTGGGCGCTTCGGGCTGCAGCAGGTGCAAGTGGACTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533827.5
3UTR-3UTR TCA 90 bp TGGATGGCGCGGAACGAGGGCAGGTGTTGGTACTGCTGCAGCACGGCCTGCGCGGTTCCACGCACTTGGTaGGGCGCGAGGGCAGCTCAA +
Preference number: 2 (lower is better)
Translates to: WMARNEGRCWYCCSTACAVPRTW*GARAAQ
Trigger: TTGAGCTGCCCTCGCGCCTCACCAAGTGCGTGGAAC...CGCGCAGGCCGTGCTGCAGCAGTACCAACACCTGCCCTCGTTCCGCGCCATCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533487.1
ENST00000534124.5
3UTR-3UTR GCA 90 bp GCATGGCAGCGGCTGCGCCTAGCCGCGCTCGCAGATGACCTCAACCACACTGGGCCTCTGCACACAGCGTaGTCACGGGCGTCACTGGGA +
Preference number: 2 (lower is better)
Translates to: AWQRLRLAALADDLNHTGPLHTA*SRASLG
Trigger: TCCCAGTGACGCCCGTGAGCACGCTGTGTGCAGAGG...CCCAGTGTGGTTGAGGTCATCTGCGAGCGCGGCTAGGCGCAGCCGCTGCCATGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533827.5
3UTR-3UTR CCA 90 bp CGGCTGCGCCTAGCCGCGCTCGCAGATGACCTCAACCACACTGGGCTCCATGGGAGATCCTGGGTGCCATaGGGTGCAGGGACAGACCGG +
Preference number: 2 (lower is better)
Translates to: RLRLAALADDLNHTGLHGRSWVP*GAGTDR
Trigger: CCGGTCTGTCCCTGCACCCCATGGCACCCAGGATCT...CCCATGGAGCCCAGTGTGGTTGAGGTCATCTGCGAGCGCGGCTAGGCGCAGCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530673.1
ENST00000533827.5
3UTR-3UTR CCA 90 bp GGCCGTGATGACCTGGCAGTCGTCCTGGATGGCGCGGAACGAGGGCAGGTGTTGTTGGTGATGCGCTCGTaGCGGTCCTGCAGCGTGGCG +
Preference number: 2 (lower is better)
Translates to: GRDDLAVVLDGAERGQVLLVMRS*RSCSVA
Trigger: CGCCACGCTGCAGGACCGCCACGAGCGCATCACCAA...CAACACCTGCCCTCGTTCCGCGCCATCCAGGACGACTGCCAGGTCATCACGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533487.1
ENST00000534124.5
3UTR-3UTR CCA 90 bp CGGCTGCGCCTAGCCGCGCTCGCAGATGACCTCAACCACACTGGGCTCCATGGGGCACGTCGATGGCGGTaGTATCCTCCACCACCCGCT +
Preference number: 2 (lower is better)
Translates to: RLRLAALADDLNHTGLHGARRWR*YPPPPA
Trigger: AGCGGGTGGTGGAGGATACCACCGCCATCGACGTGC...CCCATGGAGCCCAGTGTGGTTGAGGTCATCTGCGAGCGCGGCTAGGCGCAGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533827.5
3UTR-3UTR TCA 90 bp GTCCACTTGCACCTGCTGCAGCCCGAAGCGCCCAAAGGTGCGCAGCCGCACACATCTGGGGTCTGGCCATaGGGGCACTGTCCAGCCATC +
Preference number: 2 (lower is better)
Translates to: VHLHLLQPEAPKGAQPHTSGVWP*GHCPAI
Trigger: GATGGCTGGACAGTGCCCTCATGGCCAGACCCCAGA...TGTGTGCGGCTGCGCACCTTTGGGCGCTTCGGGCTGCAGCAGGTGCAAGTGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533827.5
3UTR-3UTR GCA 90 bp CTGCGGGGAAGGACCACCGAGACCAGATCCTGGGTGCCATGGGGTGCAGGGACACTGGGTGCCATGGGGTaGAGGGACAGACCGGTGCAT +
Preference number: 2 (lower is better)
Translates to: LRGRTTETRSWVPWGAGTLGAMG*RDRPVH
Trigger: ATGCACCGGTCTGTCCCTGCACCCCATGGCACCCAG...TGTCCCTGCACCCCATGGCACCCAGGATCTGGTCTCGGTGGTCCTTCCCCGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000279281.8
ENST00000530673.1
ENST00000533827.5
3UTR-3UTR CCA 90 bp ACCTGCCTGCGGGGAAGGACCACCGAGACCAGATCCTGGGTGCCATGGGGTGCAACCGAGACCAGATCCTaGGTGCCATGGGGTGCAGGG +
Preference number: 2 (lower is better)
Translates to: TCLRGRTTETRSWVPWGATETRS*VPWGAG
Trigger: CCCTGCACCCCATGGCACCCAGGATCTGGTCTCGGT...TGCACCCCATGGCACCCAGGATCTGGTCTCGGTGGTCCTTCCCCGCAGGCAGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000279281.8
ENST00000530673.1
ENST00000533827.5
3UTR-3UTR CCA 90 bp CACTTGCACCTGCTGCAGCCCGAAGCGCCCAAAGGTGCGCAGCCGCACACACTCACCGAGACCAGATCCTaGGTGCCATGGGGTGCAGGG +
Preference number: 2 (lower is better)
Translates to: HLHLLQPEAPKGAQPHTLTETRS*VPWGAG
Trigger: CCCTGCACCCCATGGCACCCAGGATCTGGTCTCGGT...GAGTGTGTGCGGCTGCGCACCTTTGGGCGCTTCGGGCTGCAGCAGGTGCAAGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530673.1
ENST00000533827.5
3UTR-3UTR CCA 90 bp CAGGTGTTGGTACTGCTGCAGCACGGCCTGCGCGCGGCCCTGGTAGCGCACCGCTCACTGCCATGTTGGTaGCCAGCCGGTCCATCTCAT +
Preference number: 2 (lower is better)
Translates to: QVLVLLQHGLRAALVAHRSLPCW*PAGPSH
Trigger: ATGAGATGGACCGGCTGGCCACCAACATGGCAGTGA...GCGGTGCGCTACCAGGGCCGCGCGCAGGCCGTGCTGCAGCAGTACCAACACCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533487.1
ENST00000534124.5
3UTR-3UTR GCA 90 bp CCGCACATTCCGGGGCTCCAGAGTGCTGAGCCAGTCGCGAGTCTCCACGCTCTTCTGGGTGCCATGGGGTaGAGGGACAGACCGGTGCAT +
Preference number: 2 (lower is better)
Translates to: PHIPGLQSAEPVASLHALLGAMG*RDRPVH
Trigger: ATGCACCGGTCTGTCCCTGCACCCCATGGCACCCAG...AAGAGCGTGGAGACTCGCGACTGGCTCAGCACTCTGGAGCCCCGGAATGTGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533827.5
3UTR-3UTR GCA 90 bp GGACCACCGAGACCAGATCCTGGGTGCCATGGGGTGCAGGGACAGACCGGTGCAAGACCAGATCCTGGGTaGCATGGGGTGCAGGGACAG +
Preference number: 2 (lower is better)
Translates to: GPPRPDPGCHGVQGQTGARPDPG*HGVQGQ
Trigger: CTGTCCCTGCACCCCATGGCACCCAGGATCTGGTCT...TGCACCGGTCTGTCCCTGCACCCCATGGCACCCAGGATCTGGTCTCGGTGGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279281.8
ENST00000530673.1
ENST00000533827.5
3UTR-3UTR GCA 90 bp GTCCACTTGCACCTGCTGCAGCCCGAAGCGCCCAAAGGTGCGCAGCCGCACACAAGACCAGATCCTGGGTaGCATGGGGTGCAGGGACAG +
Preference number: 2 (lower is better)
Translates to: VHLHLLQPEAPKGAQPHTRPDPG*HGVQGQ
Trigger: CTGTCCCTGCACCCCATGGCACCCAGGATCTGGTCT...TGTGTGCGGCTGCGCACCTTTGGGCGCTTCGGGCTGCAGCAGGTGCAAGTGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530673.1
ENST00000533827.5
3UTR-3UTR GCA 90 bp CGGCTGCGCCTAGCCGCGCTCGCAGATGACCTCAACCACACTGGGCTCCATGGGTCGTCCAGCAGCAAGTaGACGAGTTCTTCGTCGGCC +
Preference number: 2 (lower is better)
Translates to: RLRLAALADDLNHTGLHGSSSSK*TSSSSA
Trigger: GGCCGACGAAGAACTCGTGCACTTGCTGCTGGACGA...CCCATGGAGCCCAGTGTGGTTGAGGTCATCTGCGAGCGCGGCTAGGCGCAGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530673.1
ENST00000533827.5
3UTR-3UTR CCA 90 bp GTGATGACCTGGCAGTCGTCCTGGATGGCGCGGAACGAGGGCAGGTGTTGGTACTTCCGCAGCAGCGCGTaGACCCCTGCCAGCTTGGTG +
Preference number: 2 (lower is better)
Translates to: VMTWQSSWMARNEGRCWYFRSSA*TPASLV
Trigger: CACCAAGCTGGCAGGGGTCCACGCGCTGCTGCGGAA...GTACCAACACCTGCCCTCGTTCCGCGCCATCCAGGACGACTGCCAGGTCATCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533487.1
ENST00000534124.5
3UTR CAA 90 bp GGCCACAAAACGCCACAGGTAGAGCTGCAGAAAGTGGCAGTCCACTaGCACCTGCTGCAGCCCGAAGCGCCCAAAGGTGCGCAGCCGCAC +
Preference number: 2 (lower is better)
Translates to: GHKTPQVELQKVAVH*HLLQPEAPKGAQPH
Trigger: GTGCGGCTGCGCACCTTTGGGCGCTTCGGGCTGCAGCAGGTGCAAGTGGACTGCCACTTTCTGCAGCTCTACCTGTGGCGTTTTGTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530673.1
ENST00000533827.5
3UTR-3UTR GCA 90 bp GAGGCGCGAGGGCAGCTCAAAGAGGAACTGCAGCTTCCGCAGCAGCGCGTGGACGAAGTCGGTGATCACTaGCATGTTGGTGGCCAGCCG +
Preference number: 2 (lower is better)
Translates to: EARGQLKEELQLPQQRVDEVGDH*HVGGQP
Trigger: CGGCTGGCCACCAACATGGCAGTGATCACCGACTTC...GTCCACGCGCTGCTGCGGAAGCTGCAGTTCCTCTTTGAGCTGCCCTCGCGCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533487.1
ENST00000534124.5
3UTR-3UTR GCA 90 bp AGTCCACTTGCACCTGCTGCAGCCCGAAGCGCCCAAAGGTGCGCAGCCGCACACCGCTGCTCTGGGCCTTaGGAACACCCTCTTCGTACA +
Preference number: 2 (lower is better)
Translates to: SPLAPAAARSAQRCAAAHRCSGP*EHPLRT
Trigger: TGTACGAAGAGGGTGTTCGCAAGGCCCAGAGCAGCG...GTGTGCGGCTGCGCACCTTTGGGCGCTTCGGGCTGCAGCAGGTGCAAGTGGACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533827.5
3UTR-3UTR GCA 90 bp GGTATAGCTGGGGGCGTAGCGGCCCTGCTGCCGAGAGCTGCTGTACACGGAGAATCTTGCTGGAGTCGCTaGTCTGGGCCTTGCGAACAC +
Preference number: 2 (lower is better)
Translates to: GIAGGVAALLPRAAVHGESCWSR*SGPCEH
Trigger: GTGTTCGCAAGGCCCAGAGCAGCGACTCCAGCAAGA...TTCTCCGTGTACAGCAGCTCTCGGCAGCAGGGCCGCTACGCCCCCAGCTATACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533827.5
3UTR-3UTR CCA 90 bp AGGGCAGCAGAGGCCACCACTTCGTCCAGCAGCAAGTGCACGAGTTCTTCGTCGAGATCCTGGGTGCCATaGGGTGCAGGGACAGACCGG +
Preference number: 2 (lower is better)
Translates to: RAAEATTSSSSKCTSSSSRSWVP*GAGTDR
Trigger: CCGGTCTGTCCCTGCACCCCATGGCACCCAGGATCT...CGACGAAGAACTCGTGCACTTGCTGCTGGACGAAGTGGTGGCCTCTGCTGCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530673.1
ENST00000533827.5
3UTR CAA 90 bp AGCGTGGCGCTGATGCGAGCGCTGAAGTCGGTGATCACTGCCATGTaGGTGGCCAGCCGGTCCATCTCATCCTCCATCTTCCGGAAATCG +
Preference number: 2 (lower is better)
Translates to: SVALMRALKSVITAM*VASRSISSSIFRKS
Trigger: CGATTTCCGGAAGATGGAGGATGAGATGGACCGGCTGGCCACCAACATGGCAGTGATCACCGACTTCAGCGCTCGCATCAGCGCCACGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533487.1
ENST00000534124.5
3UTR-3UTR TCA 90 bp CTGATCTTGATGATGCCGGTCAGCACCGACACCTTGTTGAACTCCACAGGGCTGGGGGCTCCAGAGTGCTaGGCCAGTCGCGAGTCTCCA +
Preference number: 2 (lower is better)
Translates to: LILMMPVSTDTLLNSTGLGAPEC*ASRESP
Trigger: TGGAGACTCGCGACTGGCTCAGCACTCTGGAGCCCC...CAGCCCTGTGGAGTTCAACAAGGTGTCGGTGCTGACCGGCATCATCAAGATCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533827.5
3UTR-3UTR GCA 90 bp CCACTTGCACCTGCTGCAGCCCGAAGCGCCCAAAGGTGCGCAGCCGCACACACTCACTGTCCAGCCATCTaGATTCCCAGCAACACCATT +
Preference number: 2 (lower is better)
Translates to: PLAPAAARSAQRCAAAHTHCPAI*IPSNTI
Trigger: AATGGTGTTGCTGGGAATGCAGATGGCTGGACAGTG...AGTGTGTGCGGCTGCGCACCTTTGGGCGCTTCGGGCTGCAGCAGGTGCAAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533827.5
3UTR-3UTR CCA 90 bp GCCCTGGTAGCGCACCGCCTGCCCATAGGCGCCCAGTTCCACGCACTTGGTGAGTCTTCATCTTCCGGATaGTGTATACTCCCCGTAACC +
Preference number: 2 (lower is better)
Translates to: ALVAHRLPIGAQFHALGESSSSG*CILPVT
Trigger: GGTTACGGGGAGTATACACCATCCGGAAGATGAAGA...CTCACCAAGTGCGTGGAACTGGGCGCCTATGGGCAGGCGGTGCGCTACCAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534124.5
3UTR-3UTR GCA 90 bp CAGCGTCTTCAGGCTGATCTTGATGATGCCGGTCAGCACCGACACCTTGTTGAAAGACCAGATCCTGGGTaGCATGGGGTGCAGGGACAG +
Preference number: 2 (lower is better)
Translates to: QRLQADLDDAGQHRHLVERPDPG*HGVQGQ
Trigger: CTGTCCCTGCACCCCATGGCACCCAGGATCTGGTCT...TTCAACAAGGTGTCGGTGCTGACCGGCATCATCAAGATCAGCCTGAAGACGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533827.5
3UTR-3UTR CCA 90 bp TTGTTGAACTCCACAGGGCTGAACACATCAATACGTTCAGAGAATAGCTTCTGGAGAAAGTCCTCTTGCTaGAGTCGCTGCTCTGGGCCT +
Preference number: 2 (lower is better)
Translates to: LLNSTGLNTSIRSENSFWRKSSC*SRCSGP
Trigger: AGGCCCAGAGCAGCGACTCCAGCAAGAGGACTTTCT...CCAGAAGCTATTCTCTGAACGTATTGATGTGTTCAGCCCTGTGGAGTTCAACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533827.5
3UTR GCA 72 bp GCGCCTGAGCCGCCCTCCCTAAAGCGCTGCCGCAGCTaGTGGGCCAGGCGGGCCGTGATGACCTGGCAGTCG +
Preference number: 3 (lower is better)
Translates to: APEPPSLKRCRS*WARRAVMTWQS
Trigger: CGACTGCCAGGTCATCACGGCCCGCCTGGCCCAGCAGCTGCGGCAGCGCTTTAGGGAGGGCGGCTCAGGCGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534124.5
3UTR CCA 72 bp AGCGCGTGGACCCCTGCCAGCTTGGTGATGCGCTCGTaGCGGTCCTGCAGCGTGGCGCTGATGCGAGCGCTG +
Preference number: 3 (lower is better)
Translates to: SAWTPASLVMRS*RSCSVALMRAL
Trigger: CAGCGCTCGCATCAGCGCCACGCTGCAGGACCGCCACGAGCGCATCACCAAGCTGGCAGGGGTCCACGCGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533487.1
ENST00000534124.5
3UTR CCA 72 bp CAGTCGTCCTGGATGGCGCGGAACGAGGGCAGGTGTTaGTACTGCTGCAGCACGGCCTGCGCGCGGCCCTGG +
Preference number: 3 (lower is better)
Translates to: QSSWMARNEGRC*YCCSTACARPW
Trigger: CCAGGGCCGCGCGCAGGCCGTGCTGCAGCAGTACCAACACCTGCCCTCGTTCCGCGCCATCCAGGACGACTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533487.1
ENST00000534124.5
3UTR CCA 72 bp CCTGGGTGCCATGGGGTGCAGGGACAGACCGGTGCATaGCAGCGGCTGCGCCTAGCCGCGCTCGCAGATGAC +
Preference number: 3 (lower is better)
Translates to: PGCHGVQGQTGA*QRLRLAALADD
Trigger: GTCATCTGCGAGCGCGGCTAGGCGCAGCCGCTGCCATGCACCGGTCTGTCCCTGCACCCCATGGCACCCAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530673.1
ENST00000533827.5
3UTR GCA 72 bp AGATCCTGGGTGCCATGGGGTGCAGGGACAGACCGGTaGATGGCAGCGGCTGCGCCTAGCCGCGCTCGCAGA +
Preference number: 3 (lower is better)
Translates to: RSWVPWGAGTDR*MAAAAPSRARR
Trigger: TCTGCGAGCGCGGCTAGGCGCAGCCGCTGCCATGCACCGGTCTGTCCCTGCACCCCATGGCACCCAGGATCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530673.1
ENST00000533827.5
3UTR GCA 72 bp ACCCCTGCCAGCTTGGTGATGCGCTCGTGGCGGTCCTaGAGCGTGGCGCTGATGCGAGCGCTGAAGTCGGTG +
Preference number: 3 (lower is better)
Translates to: TPASLVMRSWRS*SVALMRALKSV
Trigger: CACCGACTTCAGCGCTCGCATCAGCGCCACGCTGCAGGACCGCCACGAGCGCATCACCAAGCTGGCAGGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533487.1
ENST00000534124.5
3UTR GCA 72 bp GCCGCCGCGCCGTTTCCCTGGCCTCTGCACACAGCGTaGTCACGGGCGTCACTGGGAACTGATCAGGCAGCT +
Preference number: 3 (lower is better)
Translates to: AAAPFPWPLHTA*SRASLGTDQAA
Trigger: AGCTGCCTGATCAGTTCCCAGTGACGCCCGTGAGCACGCTGTGTGCAGAGGCCAGGGAAACGGCGCGGCGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533827.5
3UTR CCA 72 bp TGGGCCAGGCGGGCCGTGATGACCTGGCAGTCGTCCTaGATGGCGCGGAACGAGGGCAGGTGTTGGTACTGC +
Preference number: 3 (lower is better)
Translates to: WARRAVMTWQSS*MARNEGRCWYC
Trigger: GCAGTACCAACACCTGCCCTCGTTCCGCGCCATCCAGGACGACTGCCAGGTCATCACGGCCCGCCTGGCCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533487.1
ENST00000534124.5
3UTR CCA 72 bp TCACGTAGTGGGTCAGCAGCCGCCGCGCCGTTTCCCTaGCCTCTGCACACAGCGTGCTCACGGGCGTCACTG +
Preference number: 3 (lower is better)
Translates to: SRSGSAAAAPFP*PLHTACSRASL
Trigger: CAGTGACGCCCGTGAGCACGCTGTGTGCAGAGGCCAGGGAAACGGCGCGGCGGCTGCTGACCCACTACGTGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533827.5
3UTR GCA 72 bp GTCCCAGGGTTTTTAAGTGGAACCGCCCCCTGCCCATaGTGGGCCCAGCACACCAGCCAATCGGCGCTCGGG +
Preference number: 3 (lower is better)
Translates to: VPGFLSGTAPCP*WAQHTSQSALG
Trigger: CCCGAGCGCCGATTGGCTGGTGTGCTGGGCCCAGCATGGGCAGGGGGCGGTTCCACTTAAAAACCCTGGGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000279281.8
3UTR GCA 72 bp CACTTGGTGAGGCGCGAGGGCAGCTCAAAGAGGAACTaGAGCTTCCGCAGCAGCGCGTGGACCCCTGCCAGC +
Preference number: 3 (lower is better)
Translates to: HLVRREGSSKRN*SFRSSAWTPAS
Trigger: GCTGGCAGGGGTCCACGCGCTGCTGCGGAAGCTGCAGTTCCTCTTTGAGCTGCCCTCGCGCCTCACCAAGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533487.1
ENST00000534124.5
3UTR-3UTR CAA 90 bp GTGATGACCTGGCAGTCGTCCTGGATGGCGCGGAACGAGGGCAGGTGTTGGTACTGGACCCCTGCCAGCTaGGTGATGCGCTCGTGGCGG +
Preference number: 3 (lower is better)
Translates to: VMTWQSSWMARNEGRCWYWTPAS*VMRSWR
Trigger: CCGCCACGAGCGCATCACCAAGCTGGCAGGGGTCCA...GTACCAACACCTGCCCTCGTTCCGCGCCATCCAGGACGACTGCCAGGTCATCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533487.1
ENST00000534124.5
3UTR TCA 72 bp CCGCCTGCCCATAGGCGCCCAGTTCCACGCACTTGGTaGGGCGCGAGGGCAGCTCAAAGAGGAACTGCAGCT +
Preference number: 3 (lower is better)
Translates to: PPAHRRPVPRTW*GARAAQRGTAA
Trigger: AGCTGCAGTTCCTCTTTGAGCTGCCCTCGCGCCTCACCAAGTGCGTGGAACTGGGCGCCTATGGGCAGGCGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533487.1
ENST00000534124.5
3UTR GCA 72 bp CGTGGCGCTGATGCGAGCGCTGAAGTCGGTGATCACTaGCATGTTGGTGGCCAGCCGGTCCATCTCATCCTC +
Preference number: 3 (lower is better)
Translates to: RGADASAEVGDH*HVGGQPVHLIL
Trigger: GAGGATGAGATGGACCGGCTGGCCACCAACATGGCAGTGATCACCGACTTCAGCGCTCGCATCAGCGCCACG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533487.1
ENST00000534124.5
3UTR GCA 72 bp TATAGCTGGGGGCGTAGCGGCCCTGCTGCCGAGAGCTaGTGTACACGGAGAAAGTCCTCTTGCTGGAGTCGC +
Preference number: 3 (lower is better)
Translates to: YSWGRSGPAAES*CTRRKSSCWSR
Trigger: GCGACTCCAGCAAGAGGACTTTCTCCGTGTACAGCAGCTCTCGGCAGCAGGGCCGCTACGCCCCCAGCTATA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533827.5
3UTR GCA 72 bp GCTGCCGAGAGCTGCTGTACACGGAGAAAGTCCTCTTaGTGGAGTCGCTGCTCTGGGCCTTGCGAACACCCT +
Preference number: 3 (lower is better)
Translates to: AAESCCTRRKSS*WSRCSGPCEHP
Trigger: AGGGTGTTCGCAAGGCCCAGAGCAGCGACTCCAGCAAGAGGACTTTCTCCGTGTACAGCAGCTCTCGGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533827.5
3UTR GCA 72 bp AGGGCAGCAGAGGCCACCACTTCGTCCAGCAGCAAGTaGACGAGTTCTTCGTCGGCCACAAAACGCCACAGG +
Preference number: 3 (lower is better)
Translates to: RAAEATTSSSSK*TSSSSATKRHR
Trigger: CCTGTGGCGTTTTGTGGCCGACGAAGAACTCGTGCACTTGCTGCTGGACGAAGTGGTGGCCTCTGCTGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530673.1
ENST00000533827.5
3UTR TCA 72 bp CCAGTCGCGAGTCTCCACGCTCTTGCGCAGCATCTGTaGTATGACCAGGCCCTGCACCTTCACGTAGTGGGT +
Preference number: 3 (lower is better)
Translates to: PVASLHALAQHL*YDQALHLHVVG
Trigger: ACCCACTACGTGAAGGTGCAGGGCCTGGTCATATCACAGATGCTGCGCAAGAGCGTGGAGACTCGCGACTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533827.5
3UTR CCA 72 bp TACACGGAGAAAGTCCTCTTGCTGGAGTCGCTGCTCTaGGCCTTGCGAACACCCTCTTCGTACAGGAGCCCC +
Preference number: 3 (lower is better)
Translates to: YTEKVLLLESLL*ALRTPSSYRSP
Trigger: GGGGCTCCTGTACGAAGAGGGTGTTCGCAAGGCCCAGAGCAGCGACTCCAGCAAGAGGACTTTCTCCGTGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533827.5
3UTR CCA 72 bp GCCGAGAGCTGCTGTACACGGAGAAAGTCCTCTTGCTaGAGTCGCTGCTCTGGGCCTTGCGAACACCCTCTT +
Preference number: 3 (lower is better)
Translates to: AESCCTRRKSSC*SRCSGPCEHPL
Trigger: AAGAGGGTGTTCGCAAGGCCCAGAGCAGCGACTCCAGCAAGAGGACTTTCTCCGTGTACAGCAGCTCTCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533827.5
3UTR GCA 72 bp TGCTGTACACGGAGAAAGTCCTCTTGCTGGAGTCGCTaGTCTGGGCCTTGCGAACACCCTCTTCGTACAGGA +
Preference number: 3 (lower is better)
Translates to: CCTRRKSSCWSR*SGPCEHPLRTG
Trigger: TCCTGTACGAAGAGGGTGTTCGCAAGGCCCAGAGCAGCGACTCCAGCAAGAGGACTTTCTCCGTGTACAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533827.5
3UTR CCA 72 bp GTTCAGAGAATAGCTTCTGGATATTGCTCAAGAGGTTaGTGTCCATCGGGGCACTGGGGGTATAGCTGGGGG +
Preference number: 3 (lower is better)
Translates to: VQRIASGYCSRG*CPSGHWGYSWG
Trigger: CCCCCAGCTATACCCCCAGTGCCCCGATGGACACCAACCTCTTGAGCAATATCCAGAAGCTATTCTCTGAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533827.5
3UTR CCA 72 bp GGGCTGAACACATCAATACGTTCAGAGAATAGCTTCTaGATATTGCTCAAGAGGTTGGTGTCCATCGGGGCA +
Preference number: 3 (lower is better)
Translates to: GLNTSIRSENSF*ILLKRLVSIGA
Trigger: TGCCCCGATGGACACCAACCTCTTGAGCAATATCCAGAAGCTATTCTCTGAACGTATTGATGTGTTCAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533827.5
CDS-3UTR GCA 90 bp CAGCACGGCCTGCGCGCGGCCCTGGTAGCGCACCGCCTGCCCATAGGCGCCCAGAAGCGCTGCCGCAGCTaGTGGGCCAGGCGGGCCGTG +
Preference number: 4 (lower is better)
Translates to: QHGLRAALVAHRLPIGAQKRCRS*WARRAV
Trigger: CACGGCCCGCCTGGCCCAGCAGCTGCGGCAGCGCTT...CTGGGCGCCTATGGGCAGGCGGTGCGCTACCAGGGCCGCGCGCAGGCCGTGCTG
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533487.1
ENST00000534124.5
CDS-3UTR TCA 90 bp ACCAGCCAATCGGCGCTCGGGGGCGGACCCGACGCGGGCGCCTCAGAAGCCTCAGTCGGGAGCCGGAGGTaGGGGCCCCAGCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: TSQSALGGGPDAGASEASVGSRR*GPQLGL
Trigger: GAGGCCGAGCTGGGGCCCTCACCTCCGGCTCCCGAC...TGAGGCTTCTGAGGCGCCCGCGTCGGGTCCGCCCCCGAGCGCCGATTGGCTGGT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000279281.8
CDS-3UTR GCA 90 bp CACACCAGCCAATCGGCGCTCGGGGGCGGACCCGACGCGGGCGCCTCAGAAGCCAGCCGGCCGCGGGCGTaGGCCAGGAACTCCTCGCAC +
Preference number: 4 (lower is better)
Translates to: HTSQSALGGGPDAGASEASRPRA*ARNSSH
Trigger: GTGCGAGGAGTTCCTGGCGCACGCCCGCGGCCGGCT...GGCTTCTGAGGCGCCCGCGTCGGGTCCGCCCCCGAGCGCCGATTGGCTGGTGTG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000279281.8
CDS-3UTR GCA 90 bp CACACCAGCCAATCGGCGCTCGGGGGCGGACCCGACGCGGGCGCCTCAGAAGCCTCCACGCACTCTGCCTaGTCCGGGGCGCCTGAGCCG +
Preference number: 4 (lower is better)
Translates to: HTSQSALGGGPDAGASEASTHSA*SGAPEP
Trigger: CGGCTCAGGCGCCCCGGAGCAGGCAGAGTGCGTGGA...GGCTTCTGAGGCGCCCGCGTCGGGTCCGCCCCCGAGCGCCGATTGGCTGGTGTG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000279281.8
CDS-3UTR GCA 90 bp AGCACACCAGCCAATCGGCGCTCGGGGGCGGACCCGACGCGGGCGCCTCAGAAGCTCCGTGGCAGCGTCTaGGAGCCCGGCAGCGGCCAG +
Preference number: 4 (lower is better)
Translates to: STPANRRSGADPTRAPQKLRGSV*EPGSGQ
Trigger: CTGGCCGCTGCCGGGCTCGCAGACGCTGCCACGGAG...CTTCTGAGGCGCCCGCGTCGGGTCCGCCCCCGAGCGCCGATTGGCTGGTGTGCT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000279281.8
CDS-3UTR CCA 90 bp CCCAGCACACCAGCCAATCGGCGCTCGGGGGCGGACCCGACGCGGGCGCCTCAGGGACAGACCGGTGCATaGCAGCGGCTGCGCCTAGCC +
Preference number: 4 (lower is better)
Translates to: PSTPANRRSGADPTRAPQGQTGA*QRLRLA
Trigger: GGCTAGGCGCAGCCGCTGCCATGCACCGGTCTGTCC...CTGAGGCGCCCGCGTCGGGTCCGCCCCCGAGCGCCGATTGGCTGGTGTGCTGGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000279281.8
CDS-3UTR TCA 90 bp CGGCGCTCGGGGGCGGACCCGACGCGGGCGCCTCAGAAGCCTCAGCTTCAAAACCTGCTCCGGGGCGCCTaGGCCGCCCTCCCTAAAGCG +
Preference number: 4 (lower is better)
Translates to: RRSGADPTRAPQKPQLQNLLRGA*AALPKA
Trigger: CGCTTTAGGGAGGGCGGCTCAGGCGCCCCGGAGCAG...GTTTTGAAGCTGAGGCTTCTGAGGCGCCCGCGTCGGGTCCGCCCCCGAGCGCCG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000279281.8
CDS-3UTR GCA 90 bp CCAATCGGCGCTCGGGGGCGGACCCGACGCGGGCGCCTCAGAAGCCTCAGCTTCAGGCCCGGCGGCAGCTaGCGCCGCCATCGTTCCAAC +
Preference number: 4 (lower is better)
Translates to: PIGARGRTRRGRLRSLSFRPGGS*RRHRSN
Trigger: GTTGGAACGATGGCGGCGGCAGCTGCCGCCGGGCCT...GAAGCTGAGGCTTCTGAGGCGCCCGCGTCGGGTCCGCCCCCGAGCGCCGATTGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000279281.8
CDS-3UTR CCA 90 bp CAGCACGGCCTGCGCGCGGCCCTGGTAGCGCACCGCCTGCCCATAGGCGCCCAGCGGGCCGTGATGACCTaGCAGTCGTCCTGGATGGCG +
Preference number: 4 (lower is better)
Translates to: QHGLRAALVAHRLPIGAQRAVMT*QSSWMA
Trigger: CGCCATCCAGGACGACTGCCAGGTCATCACGGCCCG...CTGGGCGCCTATGGGCAGGCGGTGCGCTACCAGGGCCGCGCGCAGGCCGTGCTG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533487.1
ENST00000534124.5
CDS-3UTR CCA 90 bp CCCAGCACACCAGCCAATCGGCGCTCGGGGGCGGACCCGACGCGGGCGCCTCAGCACTGGGGGTATAGCTaGGGGCGTAGCGGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: PSTPANRRSGADPTRAPQHWGYS*GRSGPA
Trigger: AGCAGGGCCGCTACGCCCCCAGCTATACCCCCAGTG...CTGAGGCGCCCGCGTCGGGTCCGCCCCCGAGCGCCGATTGGCTGGTGTGCTGGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000279281.8
CDS-3UTR TCA 90 bp CCAATCGGCGCTCGGGGGCGGACCCGACGCGGGCGCCTCAGAAGCCTCAGCTTCCCACCACCCGCTTCATaGCGGCCCGCACATTCCGGG +
Preference number: 4 (lower is better)
Translates to: PIGARGRTRRGRLRSLSFPPPAS*RPAHSG
Trigger: CCCGGAATGTGCGGGCCGTCATGAAGCGGGTGGTGG...GAAGCTGAGGCTTCTGAGGCGCCCGCGTCGGGTCCGCCCCCGAGCGCCGATTGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000279281.8
CDS-3UTR GCA 90 bp ACCAGCCAATCGGCGCTCGGGGGCGGACCCGACGCGGGCGCCTCAGAAGCCTCACGCTCGTGGCGGTCCTaGAGCGTGGCGCTGATGCGA +
Preference number: 4 (lower is better)
Translates to: TSQSALGGGPDAGASEASRSWRS*SVALMR
Trigger: TCGCATCAGCGCCACGCTGCAGGACCGCCACGAGCG...TGAGGCTTCTGAGGCGCCCGCGTCGGGTCCGCCCCCGAGCGCCGATTGGCTGGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000279281.8
CDS-3UTR GCA 90 bp CTGCTGCAGCACGGCCTGCGCGCGGCCCTGGTAGCGCACCGCCTGCCCATAGGCGGCAGGTGTTGGTACTaGTGCAGCACGGCCTGCGCG +
Preference number: 4 (lower is better)
Translates to: LLQHGLRAALVAHRLPIGGRCWY*CSTACA
Trigger: CGCGCAGGCCGTGCTGCAGCAGTACCAACACCTGCC...GCCTATGGGCAGGCGGTGCGCTACCAGGGCCGCGCGCAGGCCGTGCTGCAGCAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533487.1
ENST00000534124.5
CDS-3UTR GCA 90 bp GCGCACCGCCTGCCCATAGGCGCCCAGTTCCACGCACTTGGTGAGGCGCGAGGGTCCACGCACTCTGCCTaGTCCGGGGCGCCTGAGCCG +
Preference number: 4 (lower is better)
Translates to: AHRLPIGAQFHALGEARGSTHSA*SGAPEP
Trigger: CGGCTCAGGCGCCCCGGAGCAGGCAGAGTGCGTGGA...CCCTCGCGCCTCACCAAGTGCGTGGAACTGGGCGCCTATGGGCAGGCGGTGCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534124.5
CDS-3UTR CCA 90 bp CACACCAGCCAATCGGCGCTCGGGGGCGGACCCGACGCGGGCGCCTCAGAAGCCGTTCCACGATCTCCGTaGCAGCGTCTGCGAGCCCGG +
Preference number: 4 (lower is better)
Translates to: HTSQSALGGGPDAGASEAVPRSP*QRLRAR
Trigger: CCGGGCTCGCAGACGCTGCCACGGAGATCGTGGAAC...GGCTTCTGAGGCGCCCGCGTCGGGTCCGCCCCCGAGCGCCGATTGGCTGGTGTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000279281.8
CDS-3UTR TCA 90 bp TGGATGGCGCGGAACGAGGGCAGGTGTTGGTACTGCTGCAGCACGGCCTGCGCGCTGCTCCGGGGCGCCTaGGCCGCCCTCCCTAAAGCG +
Preference number: 4 (lower is better)
Translates to: WMARNEGRCWYCCSTACALLRGA*AALPKA
Trigger: CGCTTTAGGGAGGGCGGCTCAGGCGCCCCGGAGCAG...CGCGCAGGCCGTGCTGCAGCAGTACCAACACCTGCCCTCGTTCCGCGCCATCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534124.5
CDS-3UTR GCA 90 bp TTGGTACTGCTGCAGCACGGCCTGCGCGCGGCCCTGGTAGCGCACCGCCTGCCCAGGTGTTGGTACTGCTaGAGCACGGCCTGCGCGCGG +
Preference number: 4 (lower is better)
Translates to: LVLLQHGLRAALVAHRLPRCWYC*STACAR
Trigger: CCGCGCGCAGGCCGTGCTGCAGCAGTACCAACACCT...GGGCAGGCGGTGCGCTACCAGGGCCGCGCGCAGGCCGTGCTGCAGCAGTACCAA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533487.1
ENST00000534124.5
CDS-3UTR GCA 90 bp TGCCTGCGGGGAAGGACCACCGAGACCAGATCCTGGGTGCCATGGGGTGCAGGGCCCAGCCACGCGAGGTaGTGCCAGCGCCTGGCGGAC +
Preference number: 4 (lower is better)
Translates to: CLRGRTTETRSWVPWGAGPSHAR*CQRLAD
Trigger: GTCCGCCAGGCGCTGGCAGCACCTCGCGTGGCTGGG...CCCTGCACCCCATGGCACCCAGGATCTGGTCTCGGTGGTCCTTCCCCGCAGGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000279281.8
CDS-3UTR CCA 90 bp TTGGTACTGCTGCAGCACGGCCTGCGCGCGGCCCTGGTAGCGCACCGCCTGCCCTTGGTGATGCGCTCGTaGCGGTCCTGCAGCGTGGCG +
Preference number: 4 (lower is better)
Translates to: LVLLQHGLRAALVAHRLPLVMRS*RSCSVA
Trigger: CGCCACGCTGCAGGACCGCCACGAGCGCATCACCAA...GGGCAGGCGGTGCGCTACCAGGGCCGCGCGCAGGCCGTGCTGCAGCAGTACCAA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533487.1
ENST00000534124.5
CDS-3UTR CCA 90 bp AGCACACCAGCCAATCGGCGCTCGGGGGCGGACCCGACGCGGGCGCCTCAGAAGCGGGCCGTGATGACCTaGCAGTCGTCCTGGATGGCG +
Preference number: 4 (lower is better)
Translates to: STPANRRSGADPTRAPQKRAVMT*QSSWMA
Trigger: CGCCATCCAGGACGACTGCCAGGTCATCACGGCCCG...CTTCTGAGGCGCCCGCGTCGGGTCCGCCCCCGAGCGCCGATTGGCTGGTGTGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000279281.8
3UTR CAA 72 bp GCAGTCGTCCTGGATGGCGCGGAACGAGGGCAGGTGTaGGTACTGCTGCAGCACGGCCTGCGCGCGGCCCTG +
Preference number: 4 (lower is better)
Translates to: AVVLDGAERGQV*VLLQHGLRAAL
Trigger: CAGGGCCGCGCGCAGGCCGTGCTGCAGCAGTACCAACACCTGCCCTCGTTCCGCGCCATCCAGGACGACTGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533487.1
ENST00000534124.5
CDS-3UTR TCA 90 bp AGCACACCAGCCAATCGGCGCTCGGGGGCGGACCCGACGCGGGCGCCTCAGAAGAGCCGCGCTCGCAGATaGCCTCAACCACACTGGGCT +
Preference number: 4 (lower is better)
Translates to: STPANRRSGADPTRAPQKSRARR*PQPHWA
Trigger: AGCCCAGTGTGGTTGAGGTCATCTGCGAGCGCGGCT...CTTCTGAGGCGCCCGCGTCGGGTCCGCCCCCGAGCGCCGATTGGCTGGTGTGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000279281.8
CDS-3UTR GCA 90 bp CCCAGCACACCAGCCAATCGGCGCTCGGGGGCGGACCCGACGCGGGCGCCTCAGAGCTCAAAGAGGAACTaGAGCTTCCGCAGCAGCGCG +
Preference number: 4 (lower is better)
Translates to: PSTPANRRSGADPTRAPQSSKRN*SFRSSA
Trigger: CGCGCTGCTGCGGAAGCTGCAGTTCCTCTTTGAGCT...CTGAGGCGCCCGCGTCGGGTCCGCCCCCGAGCGCCGATTGGCTGGTGTGCTGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000279281.8
CDS-3UTR GCA 90 bp ACCTGCCTGCGGGGAAGGACCACCGAGACCAGATCCTGGGTGCCATGGGGTGCACCACCACCCTGCTCCTaGGCCAGCCGCCGCTCCACC +
Preference number: 4 (lower is better)
Translates to: TCLRGRTTETRSWVPWGAPPPCS*ASRRST
Trigger: GGTGGAGCGGCGGCTGGCGCAGGAGCAGGGTGGTGG...TGCACCCCATGGCACCCAGGATCTGGTCTCGGTGGTCCTTCCCCGCAGGCAGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000279281.8
CDS-3UTR GCA 90 bp TGCCTGCGGGGAAGGACCACCGAGACCAGATCCTGGGTGCCATGGGGTGCAGGGAGCCACGCGAGGTGCTaGCAGCGCCTGGCGGACGTC +
Preference number: 4 (lower is better)
Translates to: CLRGRTTETRSWVPWGAGSHARC*QRLADV
Trigger: GACGTCCGCCAGGCGCTGGCAGCACCTCGCGTGGCT...CCCTGCACCCCATGGCACCCAGGATCTGGTCTCGGTGGTCCTTCCCCGCAGGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000279281.8
CDS-3UTR GCA 90 bp ACCAGCCAATCGGCGCTCGGGGGCGGACCCGACGCGGGCGCCTCAGAAGCCTCACCTCTGCACACAGCGTaGTCACGGGCGTCACTGGGA +
Preference number: 4 (lower is better)
Translates to: TSQSALGGGPDAGASEASPLHTA*SRASLG
Trigger: TCCCAGTGACGCCCGTGAGCACGCTGTGTGCAGAGG...TGAGGCTTCTGAGGCGCCCGCGTCGGGTCCGCCCCCGAGCGCCGATTGGCTGGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000279281.8
CDS-3UTR GCA 90 bp GCCTGCGGGGAAGGACCACCGAGACCAGATCCTGGGTGCCATGGGGTGCAGGGAACCGCCCCCTGCCCATaGTGGGCCCAGCACACCAGC +
Preference number: 4 (lower is better)
Translates to: ACGEGPPRPDPGCHGVQGTAPCP*WAQHTS
Trigger: GCTGGTGTGCTGGGCCCAGCATGGGCAGGGGGCGGT...TCCCTGCACCCCATGGCACCCAGGATCTGGTCTCGGTGGTCCTTCCCCGCAGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000279281.8
CDS-3UTR CCA 90 bp CGGCGCTCGGGGGCGGACCCGACGCGGGCGCCTCAGAAGCCTCAGCTTCAAAACACCTGGCAGTCGTCCTaGATGGCGCGGAACGAGGGC +
Preference number: 4 (lower is better)
Translates to: RRSGADPTRAPQKPQLQNTWQSS*MARNEG
Trigger: GCCCTCGTTCCGCGCCATCCAGGACGACTGCCAGGT...GTTTTGAAGCTGAGGCTTCTGAGGCGCCCGCGTCGGGTCCGCCCCCGAGCGCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000279281.8
CDS-3UTR CCA 90 bp CAATCGGCGCTCGGGGGCGGACCCGACGCGGGCGCCTCAGAAGCCTCAGCTTCACTTCTCGGCACCTGCTaGGCCCTGGGCCGCAAACAG +
Preference number: 4 (lower is better)
Translates to: QSALGGGPDAGASEASASLLGTC*ALGRKQ
Trigger: CTGTTTGCGGCCCAGGGCCCAGCAGGTGCCGAGAAG...TGAAGCTGAGGCTTCTGAGGCGCCCGCGTCGGGTCCGCCCCCGAGCGCCGATTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000279281.8
CDS-3UTR CCA 90 bp AGGACCACCGAGACCAGATCCTGGGTGCCATGGGGTGCAGGGACAGACCGGTGCAGACCCTGCAGGTGGTaGCCCAGGCGCTCGCGGGCC +
Preference number: 4 (lower is better)
Translates to: RTTETRSWVPWGAGTDRCRPCRW*PRRSRA
Trigger: GGCCCGCGAGCGCCTGGGCCACCACCTGCAGGGTCT...GCACCGGTCTGTCCCTGCACCCCATGGCACCCAGGATCTGGTCTCGGTGGTCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279281.8
CDS-3UTR CCA 90 bp GCCAATCGGCGCTCGGGGGCGGACCCGACGCGGGCGCCTCAGAAGCCTCAGCTTACCGAGACCAGATCCTaGGTGCCATGGGGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: ANRRSGADPTRAPQKPQLTETRS*VPWGAG
Trigger: CCCTGCACCCCATGGCACCCAGGATCTGGTCTCGGT...AAGCTGAGGCTTCTGAGGCGCCCGCGTCGGGTCCGCCCCCGAGCGCCGATTGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000279281.8
CDS-3UTR CCA 90 bp CGCGCGGCCCTGGTAGCGCACCGCCTGCCCATAGGCGCCCAGTTCCACGCACTTCAAGGCAGGGACCGCTaGCTCCCAAGCGCATCTGCG +
Preference number: 4 (lower is better)
Translates to: RAALVAHRLPIGAQFHALQGRDR*LPSASA
Trigger: CGCAGATGCGCTTGGGAGCCAGCGGTCCCTGCCTTG...AAGTGCGTGGAACTGGGCGCCTATGGGCAGGCGGTGCGCTACCAGGGCCGCGCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534124.5
CDS-3UTR GCA 90 bp GACCACCGAGACCAGATCCTGGGTGCCATGGGGTGCAGGGACAGACCGGTGCATAAGCGCTGCCGCAGCTaGTGGGCCAGGCGGGCCGTG +
Preference number: 4 (lower is better)
Translates to: DHRDQILGAMGCRDRPVHKRCRS*WARRAV
Trigger: CACGGCCCGCCTGGCCCAGCAGCTGCGGCAGCGCTT...ATGCACCGGTCTGTCCCTGCACCCCATGGCACCCAGGATCTGGTCTCGGTGGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279281.8
CDS-3UTR GCA 90 bp CGGCGCTCGGGGGCGGACCCGACGCGGGCGCCTCAGAAGCCTCAGCTTCAAAACCGAAGCGCCCAAAGGTaGGCAGCCGCACACACTCCA +
Preference number: 4 (lower is better)
Translates to: RRSGADPTRAPQKPQLQNRSAQR*AAAHTP
Trigger: TGGAGTGTGTGCGGCTGCGCACCTTTGGGCGCTTCG...GTTTTGAAGCTGAGGCTTCTGAGGCGCCCGCGTCGGGTCCGCCCCCGAGCGCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000279281.8
CDS-3UTR CCA 90 bp ACCAGCCAATCGGCGCTCGGGGGCGGACCCGACGCGGGCGCCTCAGAAGCCTCAAACGAGGGCAGGTGTTaGTACTGCTGCAGCACGGCC +
Preference number: 4 (lower is better)
Translates to: TSQSALGGGPDAGASEASNEGRC*YCCSTA
Trigger: GGCCGTGCTGCAGCAGTACCAACACCTGCCCTCGTT...TGAGGCTTCTGAGGCGCCCGCGTCGGGTCCGCCCCCGAGCGCCGATTGGCTGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000279281.8
CDS-3UTR CCA 90 bp GCCAATCGGCGCTCGGGGGCGGACCCGACGCGGGCGCCTCAGAAGCCTCAGCTTGCTCACGGGCGTCACTaGGAACTGATCCTGCACCAG +
Preference number: 4 (lower is better)
Translates to: ANRRSGADPTRAPQKPQLAHGRH*ELILHQ
Trigger: CTGGTGCAGGATCAGTTCCCAGTGACGCCCGTGAGC...AAGCTGAGGCTTCTGAGGCGCCCGCGTCGGGTCCGCCCCCGAGCGCCGATTGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000279281.8
CDS-3UTR CCA 90 bp GCCAATCGGCGCTCGGGGGCGGACCCGACGCGGGCGCCTCAGAAGCCTCAGCTTCTGGAGTCGCTGCTCTaGGCCTTGCGAACACCCTCT +
Preference number: 4 (lower is better)
Translates to: ANRRSGADPTRAPQKPQLLESLL*ALRTPS
Trigger: AGAGGGTGTTCGCAAGGCCCAGAGCAGCGACTCCAG...AAGCTGAGGCTTCTGAGGCGCCCGCGTCGGGTCCGCCCCCGAGCGCCGATTGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000279281.8
CDS-3UTR TCA 90 bp ACCAGCCAATCGGCGCTCGGGGGCGGACCCGACGCGGGCGCCTCAGAAGCCTCATGCCTCCATGGTCGGTaGACTCTAACACGTCGGGAG +
Preference number: 4 (lower is better)
Translates to: TSQSALGGGPDAGASEASCLHGR*TLTRRE
Trigger: CTCCCGACGTGTTAGAGTTCACCGACCATGGAGGCA...TGAGGCTTCTGAGGCGCCCGCGTCGGGTCCGCCCCCGAGCGCCGATTGGCTGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000279281.8
CDS-3UTR TCA 90 bp CACCTGCCTGCGGGGAAGGACCACCGAGACCAGATCCTGGGTGCCATGGGGTGCGGACGAAGCCCACGATaGGGCCCTCACGGACACCCT +
Preference number: 4 (lower is better)
Translates to: HLPAGKDHRDQILGAMGCGRSPR*GPHGHP
Trigger: AGGGTGTCCGTGAGGGCCTCATCGTGGGCTTCGTCC...GCACCCCATGGCACCCAGGATCTGGTCTCGGTGGTCCTTCCCCGCAGGCAGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279281.8
ENST00000533827.5
CDS-3UTR GCA 90 bp GCGCTGATGCGAGCGCTGAAGTCGGTGATCACTGCCATGTTGGTGGCCAGCCGGAGGCCCGGCGGCAGCTaGCGCCGCCATCGTTCCAAC +
Preference number: 4 (lower is better)
Translates to: ALMRALKSVITAMLVASRRPGGS*RRHRSN
Trigger: GTTGGAACGATGGCGGCGGCAGCTGCCGCCGGGCCT...CCGGCTGGCCACCAACATGGCAGTGATCACCGACTTCAGCGCTCGCATCAGCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534124.5
CDS-3UTR GCA 90 bp TTGGTACTGCTGCAGCACGGCCTGCGCGCGGCCCTGGTAGCGCACCGCCTGCCCGAAGTCGGTGATCACTaGCATGTTGGTGGCCAGCCG +
Preference number: 4 (lower is better)
Translates to: LVLLQHGLRAALVAHRLPEVGDH*HVGGQP
Trigger: CGGCTGGCCACCAACATGGCAGTGATCACCGACTTC...GGGCAGGCGGTGCGCTACCAGGGCCGCGCGCAGGCCGTGCTGCAGCAGTACCAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533487.1
ENST00000534124.5
CDS-3UTR GCA 90 bp GTCGTCCTGGATGGCGCGGAACGAGGGCAGGTGTTGGTACTGCTGCAGCACGGCCGCTCGTGGCGGTCCTaGAGCGTGGCGCTGATGCGA +
Preference number: 4 (lower is better)
Translates to: VVLDGAERGQVLVLLQHGRSWRS*SVALMR
Trigger: TCGCATCAGCGCCACGCTGCAGGACCGCCACGAGCG...GCCGTGCTGCAGCAGTACCAACACCTGCCCTCGTTCCGCGCCATCCAGGACGAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533487.1
ENST00000534124.5
CDS-3UTR GCA 90 bp AGCGTGGCGCTGATGCGAGCGCTGAAGTCGGTGATCACTGCCATGTTGGTGGCCAGCCGGCCGCGGGCGTaGGCCAGGAACTCCTCGCAC +
Preference number: 4 (lower is better)
Translates to: SVALMRALKSVITAMLVASRPRA*ARNSSH
Trigger: GTGCGAGGAGTTCCTGGCGCACGCCCGCGGCCGGCT...GGCCACCAACATGGCAGTGATCACCGACTTCAGCGCTCGCATCAGCGCCACGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534124.5
CDS-3UTR GCA 90 bp CGGGGAAGGACCACCGAGACCAGATCCTGGGTGCCATGGGGTGCAGGGACAGACTTGTCACCACCACCCTaGTCCTGCGCCAGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: RGRTTETRSWVPWGAGTDLSPPP*SCASRR
Trigger: GCGGCGGCTGGCGCAGGAGCAGGGTGGTGGTGACAA...GTCTGTCCCTGCACCCCATGGCACCCAGGATCTGGTCTCGGTGGTCCTTCCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000279281.8
CDS-3UTR GCA 90 bp AGCACACCAGCCAATCGGCGCTCGGGGGCGGACCCGACGCGGGCGCCTCAGAAGCACGGACACCCTGACTaGAGAACTCACCCCGGAAGT +
Preference number: 4 (lower is better)
Translates to: STPANRRSGADPTRAPQKHGHPD*RTHPGS
Trigger: ACTTCCGGGGTGAGTTCTGCAGTCAGGGTGTCCGTG...CTTCTGAGGCGCCCGCGTCGGGTCCGCCCCCGAGCGCCGATTGGCTGGTGTGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000279281.8
CDS-3UTR GCA 90 bp CCAATCGGCGCTCGGGGGCGGACCCGACGCGGGCGCCTCAGAAGCCTCAGCTTCTCTTGCTGGAGTCGCTaGTCTGGGCCTTGCGAACAC +
Preference number: 4 (lower is better)
Translates to: PIGARGRTRRGRLRSLSFSCWSR*SGPCEH
Trigger: GTGTTCGCAAGGCCCAGAGCAGCGACTCCAGCAAGA...GAAGCTGAGGCTTCTGAGGCGCCCGCGTCGGGTCCGCCCCCGAGCGCCGATTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000279281.8
CDS-3UTR GCA 90 bp CCAATCGGCGCTCGGGGGCGGACCCGACGCGGGCGCCTCAGAAGCCTCAGCTTCCCTGCTGCCGAGAGCTaGTGTACACGGAGAAAGTCC +
Preference number: 4 (lower is better)
Translates to: PIGARGRTRRGRLRSLSFPAAES*CTRRKS
Trigger: GGACTTTCTCCGTGTACAGCAGCTCTCGGCAGCAGG...GAAGCTGAGGCTTCTGAGGCGCCCGCGTCGGGTCCGCCCCCGAGCGCCGATTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000279281.8
CDS-3UTR GCA 90 bp AGGACCACCGAGACCAGATCCTGGGTGCCATGGGGTGCAGGGACAGACCGGTGCGCCGGTCCTGACACCTaGCTGCGGGGAAGGACCACC +
Preference number: 4 (lower is better)
Translates to: RTTETRSWVPWGAGTDRCAGPDT*LRGRTT
Trigger: GGTGGTCCTTCCCCGCAGGCAGGTGTCAGGACCGGC...GCACCGGTCTGTCCCTGCACCCCATGGCACCCAGGATCTGGTCTCGGTGGTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000279281.8
CDS-3UTR CCA 90 bp TGCCTGCGGGGAAGGACCACCGAGACCAGATCCTGGGTGCCATGGGGTGCAGGGTTCCGCAGCAGCGCGTaGACCCCTGCCAGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: CLRGRTTETRSWVPWGAGFRSSA*TPASLV
Trigger: CACCAAGCTGGCAGGGGTCCACGCGCTGCTGCGGAA...CCCTGCACCCCATGGCACCCAGGATCTGGTCTCGGTGGTCCTTCCCCGCAGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000279281.8
CDS-3UTR CCA 90 bp TGGATGGCGCGGAACGAGGGCAGGTGTTGGTACTGCTGCAGCACGGCCTGCGCGACCTGGCAGTCGTCCTaGATGGCGCGGAACGAGGGC +
Preference number: 4 (lower is better)
Translates to: WMARNEGRCWYCCSTACATWQSS*MARNEG
Trigger: GCCCTCGTTCCGCGCCATCCAGGACGACTGCCAGGT...CGCGCAGGCCGTGCTGCAGCAGTACCAACACCTGCCCTCGTTCCGCGCCATCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533487.1
ENST00000534124.5
CDS-3UTR CCA 90 bp CTGCGGGGAAGGACCACCGAGACCAGATCCTGGGTGCCATGGGGTGCAGGGACAGGTGCTGCCAGCGCCTaGCGGACGTCTGTCAGGCAG +
Preference number: 4 (lower is better)
Translates to: LRGRTTETRSWVPWGAGTGAASA*RTSVRQ
Trigger: CTGCCTGACAGACGTCCGCCAGGCGCTGGCAGCACC...TGTCCCTGCACCCCATGGCACCCAGGATCTGGTCTCGGTGGTCCTTCCCCGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000279281.8
CDS-3UTR CCA 90 bp ACCAGCCAATCGGCGCTCGGGGGCGGACCCGACGCGGGCGCCTCAGAAGCCTCAGGCTCAGGATGGAGCTaGCCACATTGGCCAGCAACT +
Preference number: 4 (lower is better)
Translates to: TSQSALGGGPDAGASEASGSGWS*PHWPAT
Trigger: AGTTGCTGGCCAATGTGGCCAGCTCCATCCTGAGCC...TGAGGCTTCTGAGGCGCCCGCGTCGGGTCCGCCCCCGAGCGCCGATTGGCTGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000279281.8
CDS-3UTR CCA 90 bp CTGCGGGGAAGGACCACCGAGACCAGATCCTGGGTGCCATGGGGTGCAGGGACAGCCGCGCCGTTTCCCTaGCCTCTGCACACAGCGTGC +
Preference number: 4 (lower is better)
Translates to: LRGRTTETRSWVPWGAGTAAPFP*PLHTAC
Trigger: GCACGCTGTGTGCAGAGGCCAGGGAAACGGCGCGGC...TGTCCCTGCACCCCATGGCACCCAGGATCTGGTCTCGGTGGTCCTTCCCCGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279281.8
ENST00000533827.5
CDS-3UTR CCA 90 bp GCCTGCGGGGAAGGACCACCGAGACCAGATCCTGGGTGCCATGGGGTGCAGGGACATGGGCACAGGGTCTaGGCAGCGCAGGGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: ACGEGPPRPDPGCHGVQGHGHRV*AAQGSR
Trigger: TCTGCTGCCCTGCGCTGCCCAGACCCTGTGCCCATG...TCCCTGCACCCCATGGCACCCAGGATCTGGTCTCGGTGGTCCTTCCCCGCAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279281.8
ENST00000530673.1
ENST00000533827.5
CDS-3UTR TCA 90 bp CCCAGGGTTTTTAAGTGGAACCGCCCCCTGCCCATGCTGGGCCCAGCACACCAGCCCCTGCCAGCTTGGTaGTGCGCTCGTGGCGGTCCT +
Preference number: 4 (lower is better)
Translates to: PRVFKWNRPLPMLGPAHQPLPAW*CARGGP
Trigger: AGGACCGCCACGAGCGCATCACCAAGCTGGCAGGGG...CTGGTGTGCTGGGCCCAGCATGGGCAGGGGGCGGTTCCACTTAAAAACCCTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000279281.8
CDS-3UTR TCA 90 bp GGACCACCGAGACCAGATCCTGGGTGCCATGGGGTGCAGGGACAGACCGGTGCACGCCCGCACCAGCAGTaGGTTGTCACCACCACCCTG +
Preference number: 4 (lower is better)
Translates to: GPPRPDPGCHGVQGQTGARPHQQ*VVTTTL
Trigger: CAGGGTGGTGGTGACAACTCACTGCTGGTGCGGGCG...TGCACCGGTCTGTCCCTGCACCCCATGGCACCCAGGATCTGGTCTCGGTGGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279281.8
CDS-3UTR TCA 90 bp GGGAAGGACCACCGAGACCAGATCCTGGGTGCCATGGGGTGCAGGGACAGACCGGGGGCTCCAGAGTGCTaGGCCAGTCGCGAGTCTCCA +
Preference number: 4 (lower is better)
Translates to: GKDHRDQILGAMGCRDRPGAPEC*ASRESP
Trigger: TGGAGACTCGCGACTGGCTCAGCACTCTGGAGCCCC...CGGTCTGTCCCTGCACCCCATGGCACCCAGGATCTGGTCTCGGTGGTCCTTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000279281.8
ENST00000533827.5
CDS-3UTR GCA 90 bp CTGCGGGGAAGGACCACCGAGACCAGATCCTGGGTGCCATGGGGTGCAGGGACAAGGTGTTGGTACTGCTaGAGCACGGCCTGCGCGCGG +
Preference number: 4 (lower is better)
Translates to: LRGRTTETRSWVPWGAGTRCWYC*STACAR
Trigger: CCGCGCGCAGGCCGTGCTGCAGCAGTACCAACACCT...TGTCCCTGCACCCCATGGCACCCAGGATCTGGTCTCGGTGGTCCTTCCCCGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000279281.8
CDS-3UTR GCA 90 bp AGGACCACCGAGACCAGATCCTGGGTGCCATGGGGTGCAGGGACAGACCGGTGCGGCAGGTGTTGGTACTaGTGCAGCACGGCCTGCGCG +
Preference number: 4 (lower is better)
Translates to: RTTETRSWVPWGAGTDRCGRCWY*CSTACA
Trigger: CGCGCAGGCCGTGCTGCAGCAGTACCAACACCTGCC...GCACCGGTCTGTCCCTGCACCCCATGGCACCCAGGATCTGGTCTCGGTGGTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279281.8
CDS-3UTR GCA 90 bp GGCAGCTCAAAGAGGAACTGCAGCTTCCGCAGCAGCGCGTGGACCCCTGCCAGCGGCAGGTGTTGGTACTaGTGCAGCACGGCCTGCGCG +
Preference number: 4 (lower is better)
Translates to: GSSKRNCSFRSSAWTPASGRCWY*CSTACA
Trigger: CGCGCAGGCCGTGCTGCAGCAGTACCAACACCTGCC...GCTGGCAGGGGTCCACGCGCTGCTGCGGAAGCTGCAGTTCCTCTTTGAGCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533487.1
ENST00000534124.5
CDS-3UTR GCA 90 bp GTCCCAGGGTTTTTAAGTGGAACCGCCCCCTGCCCATGCTGGGCCCAGCACACCCCCTCCCTAAAGCGCTaGCGCAGCTGCTGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: VPGFLSGTAPCPCWAQHTPSLKR*RSCWAR
Trigger: CCTGGCCCAGCAGCTGCGGCAGCGCTTTAGGGAGGG...GGTGTGCTGGGCCCAGCATGGGCAGGGGGCGGTTCCACTTAAAAACCCTGGGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000279281.8
CDS-3UTR GCA 90 bp GGACCACCGAGACCAGATCCTGGGTGCCATGGGGTGCAGGGACAGACCGGTGCAGCGCAAAATAGCGGCTaGCCAGCTGCCGGGCGAAGG +
Preference number: 4 (lower is better)
Translates to: GPPRPDPGCHGVQGQTGAAQNSG*PAAGRR
Trigger: CCTTCGCCCGGCAGCTGGGCAGCCGCTATTTTGCGC...TGCACCGGTCTGTCCCTGCACCCCATGGCACCCAGGATCTGGTCTCGGTGGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000279281.8
CDS-3UTR GCA 90 bp GTGCAGGGACAGACCGGTGCATGGCAGCGGCTGCGCCTAGCCGCGCTCGCAGATTACAGGAGCCCCACCTaGACGTCGATGGCGGTGGTA +
Preference number: 4 (lower is better)
Translates to: VQGQTGAWQRLRLAALADYRSPT*TSMAVV
Trigger: TACCACCGCCATCGACGTGCAGGTGGGGCTCCTGTA...ATCTGCGAGCGCGGCTAGGCGCAGCCGCTGCCATGCACCGGTCTGTCCCTGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533827.5
CDS-3UTR GCA 90 bp GCCTGCGGGGAAGGACCACCGAGACCAGATCCTGGGTGCCATGGGGTGCAGGGACAGTCCACTTGCACCTaGTGCAGCCCGAAGCGCCCA +
Preference number: 4 (lower is better)
Translates to: ACGEGPPRPDPGCHGVQGQSTCT*CSPKRP
Trigger: TGGGCGCTTCGGGCTGCAGCAGGTGCAAGTGGACTG...TCCCTGCACCCCATGGCACCCAGGATCTGGTCTCGGTGGTCCTTCCCCGCAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279281.8
ENST00000530673.1
ENST00000533827.5
CDS-3UTR GCA 90 bp CCAGGGTTTTTAAGTGGAACCGCCCCCTGCCCATGCTGGGCCCAGCACACCAGCGCAGGGACAGACCGGTaGATGGCAGCGGCTGCGCCT +
Preference number: 4 (lower is better)
Translates to: PGFLSGTAPCPCWAQHTSAGTDR*MAAAAP
Trigger: AGGCGCAGCCGCTGCCATGCACCGGTCTGTCCCTGC...GCTGGTGTGCTGGGCCCAGCATGGGCAGGGGGCGGTTCCACTTAAAAACCCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000279281.8
CDS-3UTR GCA 90 bp TGGCAGTCCACTTGCACCTGCTGCAGCCCGAAGCGCCCAAAGGTGCGCAGCCGCCTGGGTGCCATGGGGTaGAGGGACAGACCGGTGCAT +
Preference number: 4 (lower is better)
Translates to: WQSTCTCCSPKRPKVRSRLGAMG*RDRPVH
Trigger: ATGCACCGGTCTGTCCCTGCACCCCATGGCACCCAG...GCGGCTGCGCACCTTTGGGCGCTTCGGGCTGCAGCAGGTGCAAGTGGACTGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530673.1
ENST00000533827.5
CDS-3UTR GCA 90 bp ACCACCGAGACCAGATCCTGGGTGCCATGGGGTGCAGGGACAGACCGGTGCATGAGTGGAACCGCCCCCTaGCCATGCTGGGCCCAGCAC +
Preference number: 4 (lower is better)
Translates to: TTETRSWVPWGAGTDRCMSGTAP*PCWAQH
Trigger: GTGCTGGGCCCAGCATGGGCAGGGGGCGGTTCCACT...CATGCACCGGTCTGTCCCTGCACCCCATGGCACCCAGGATCTGGTCTCGGTGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000279281.8
CDS-3UTR CCA 90 bp ACCTGCCTGCGGGGAAGGACCACCGAGACCAGATCCTGGGTGCCATGGGGTGCATTGGTGATGCGCTCGTaGCGGTCCTGCAGCGTGGCG +
Preference number: 4 (lower is better)
Translates to: TCLRGRTTETRSWVPWGALVMRS*RSCSVA
Trigger: CGCCACGCTGCAGGACCGCCACGAGCGCATCACCAA...TGCACCCCATGGCACCCAGGATCTGGTCTCGGTGGTCCTTCCCCGCAGGCAGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000279281.8
CDS-3UTR CCA 90 bp GGCAGCTCAAAGAGGAACTGCAGCTTCCGCAGCAGCGCGTGGACCCCTGCCAGCTTCCGCAGCAGCGCGTaGACCCCTGCCAGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: GSSKRNCSFRSSAWTPASFRSSA*TPASLV
Trigger: CACCAAGCTGGCAGGGGTCCACGCGCTGCTGCGGAA...GCTGGCAGGGGTCCACGCGCTGCTGCGGAAGCTGCAGTTCCTCTTTGAGCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000533487.1
ENST00000534124.5
CDS-3UTR CCA 90 bp GGCAGCTCAAAGAGGAACTGCAGCTTCCGCAGCAGCGCGTGGACCCCTGCCAGCGGCAGTCGTCCTGGATaGCGCGGAACGAGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: GSSKRNCSFRSSAWTPASGSRPG*RGTRAG
Trigger: ACCTGCCCTCGTTCCGCGCCATCCAGGACGACTGCC...GCTGGCAGGGGTCCACGCGCTGCTGCGGAAGCTGCAGTTCCTCTTTGAGCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533487.1
ENST00000534124.5
CDS-3UTR CCA 90 bp GTCGTCCTGGATGGCGCGGAACGAGGGCAGGTGTTGGTACTGCTGCAGCACGGCACCTGGCAGTCGTCCTaGATGGCGCGGAACGAGGGC +
Preference number: 4 (lower is better)
Translates to: VVLDGAERGQVLVLLQHGTWQSS*MARNEG
Trigger: GCCCTCGTTCCGCGCCATCCAGGACGACTGCCAGGT...GCCGTGCTGCAGCAGTACCAACACCTGCCCTCGTTCCGCGCCATCCAGGACGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533487.1
ENST00000534124.5
CDS-3UTR CCA 90 bp CACCTGCCTGCGGGGAAGGACCACCGAGACCAGATCCTGGGTGCCATGGGGTGCGCACGTCGATGGCGGTaGTATCCTCCACCACCCGCT +
Preference number: 4 (lower is better)
Translates to: HLPAGKDHRDQILGAMGCARRWR*YPPPPA
Trigger: AGCGGGTGGTGGAGGATACCACCGCCATCGACGTGC...GCACCCCATGGCACCCAGGATCTGGTCTCGGTGGTCCTTCCCCGCAGGCAGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279281.8
ENST00000533827.5
CDS-3UTR CCA 90 bp CCACTTGCACCTGCTGCAGCCCGAAGCGCCCAAAGGTGCGCAGCCGCACACACTCACTGGGGGTATAGCTaGGGGCGTAGCGGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: PLAPAAARSAQRCAAAHTHWGYS*GRSGPA
Trigger: AGCAGGGCCGCTACGCCCCCAGCTATACCCCCAGTG...AGTGTGTGCGGCTGCGCACCTTTGGGCGCTTCGGGCTGCAGCAGGTGCAAGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000530673.1
ENST00000533827.5
CDS-3UTR CCA 90 bp ACCTGCCTGCGGGGAAGGACCACCGAGACCAGATCCTGGGTGCCATGGGGTGCACATGGGCACAGGGTCTaGGCAGCGCAGGGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: TCLRGRTTETRSWVPWGAHGHRV*AAQGSR
Trigger: TCTGCTGCCCTGCGCTGCCCAGACCCTGTGCCCATG...TGCACCCCATGGCACCCAGGATCTGGTCTCGGTGGTCCTTCCCCGCAGGCAGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279281.8
ENST00000530673.1
ENST00000533827.5
CDS-3UTR CCA 90 bp GGACCACCGAGACCAGATCCTGGGTGCCATGGGGTGCAGGGACAGACCGGTGCACATGGGCACAGGGTCTaGGCAGCGCAGGGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: GPPRPDPGCHGVQGQTGAHGHRV*AAQGSR
Trigger: TCTGCTGCCCTGCGCTGCCCAGACCCTGTGCCCATG...TGCACCGGTCTGTCCCTGCACCCCATGGCACCCAGGATCTGGTCTCGGTGGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279281.8
ENST00000530673.1
ENST00000533827.5
CDS-3UTR CCA 90 bp TGCCTGCGGGGAAGGACCACCGAGACCAGATCCTGGGTGCCATGGGGTGCAGGGAGATCCTGGGTGCCATaGGGTGCAGGGACAGACCGG +
Preference number: 4 (lower is better)
Translates to: CLRGRTTETRSWVPWGAGRSWVP*GAGTDR
Trigger: CCGGTCTGTCCCTGCACCCCATGGCACCCAGGATCT...CCCTGCACCCCATGGCACCCAGGATCTGGTCTCGGTGGTCCTTCCCCGCAGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279281.8
ENST00000530673.1
ENST00000533827.5
CDS-3UTR TCA 90 bp CAGCTCAAAGAGGAACTGCAGCTTCCGCAGCAGCGCGTGGACCCCTGCCAGCTTCCCCTGCCAGCTTGGTaGTGCGCTCGTGGCGGTCCT +
Preference number: 4 (lower is better)
Translates to: QLKEELQLPQQRVDPCQLPLPAW*CARGGP
Trigger: AGGACCGCCACGAGCGCATCACCAAGCTGGCAGGGG...AAGCTGGCAGGGGTCCACGCGCTGCTGCGGAAGCTGCAGTTCCTCTTTGAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000533487.1
ENST00000534124.5
CDS-3UTR TCA 90 bp ACCTGCCTGCGGGGAAGGACCACCGAGACCAGATCCTGGGTGCCATGGGGTGCAGTTCCACGCACTTGGTaGGGCGCGAGGGCAGCTCAA +
Preference number: 4 (lower is better)
Translates to: TCLRGRTTETRSWVPWGAVPRTW*GARAAQ
Trigger: TTGAGCTGCCCTCGCGCCTCACCAAGTGCGTGGAAC...TGCACCCCATGGCACCCAGGATCTGGTCTCGGTGGTCCTTCCCCGCAGGCAGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000279281.8
CDS-3UTR GCA 90 bp ACGAGGGCAGGTGTTGGTACTGCTGCAGCACGGCCTGCGCGCGGCCCTGGTAGCAGCTCAAAGAGGAACTaGAGCTTCCGCAGCAGCGCG +
Preference number: 4 (lower is better)
Translates to: TRAGVGTAAARPARGPGSSSKRN*SFRSSA
Trigger: CGCGCTGCTGCGGAAGCTGCAGTTCCTCTTTGAGCT...GCTACCAGGGCCGCGCGCAGGCCGTGCTGCAGCAGTACCAACACCTGCCCTCGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533487.1
ENST00000534124.5
CDS-3UTR GCA 90 bp CTGGCAGTCGTCCTGGATGGCGCGGAACGAGGGCAGGTGTTGGTACTGCTGCAGAGGTGTTGGTACTGCTaGAGCACGGCCTGCGCGCGG +
Preference number: 4 (lower is better)
Translates to: LAVVLDGAERGQVLVLLQRCWYC*STACAR
Trigger: CCGCGCGCAGGCCGTGCTGCAGCAGTACCAACACCT...CTGCAGCAGTACCAACACCTGCCCTCGTTCCGCGCCATCCAGGACGACTGCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533487.1
ENST00000534124.5
CDS-3UTR GCA 90 bp CAGAAAGTGGCAGTCCACTTGCACCTGCTGCAGCCCGAAGCGCCCAAAGGTGCGGCAGGGACAGACCGGTaGATGGCAGCGGCTGCGCCT +
Preference number: 4 (lower is better)
Translates to: QKVAVHLHLLQPEAPKGAAGTDR*MAAAAP
Trigger: AGGCGCAGCCGCTGCCATGCACCGGTCTGTCCCTGC...CGCACCTTTGGGCGCTTCGGGCTGCAGCAGGTGCAAGTGGACTGCCACTTTCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530673.1
ENST00000533827.5
CDS-3UTR GCA 90 bp GACACCTGCCTGCGGGGAAGGACCACCGAGACCAGATCCTGGGTGCCATGGGGTCTGGGTGCCATGGGGTaGAGGGACAGACCGGTGCAT +
Preference number: 4 (lower is better)
Translates to: DTCLRGRTTETRSWVPWGLGAMG*RDRPVH
Trigger: ATGCACCGGTCTGTCCCTGCACCCCATGGCACCCAG...ACCCCATGGCACCCAGGATCTGGTCTCGGTGGTCCTTCCCCGCAGGCAGGTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000279281.8
CDS-3UTR GCA 90 bp TGCCTGCGGGGAAGGACCACCGAGACCAGATCCTGGGTGCCATGGGGTGCAGGGAGACCAGATCCTGGGTaGCATGGGGTGCAGGGACAG +
Preference number: 4 (lower is better)
Translates to: CLRGRTTETRSWVPWGAGRPDPG*HGVQGQ
Trigger: CTGTCCCTGCACCCCATGGCACCCAGGATCTGGTCT...CCCTGCACCCCATGGCACCCAGGATCTGGTCTCGGTGGTCCTTCCCCGCAGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000279281.8
ENST00000530673.1
ENST00000533827.5
CDS-3UTR CCA 90 bp GCTCAAAGAGGAACTGCAGCTTCCGCAGCAGCGCGTGGACCCCTGCCAGCTTGGTTCCGCAGCAGCGCGTaGACCCCTGCCAGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: AQRGTAASAAARGPLPAWFRSSA*TPASLV
Trigger: CACCAAGCTGGCAGGGGTCCACGCGCTGCTGCGGAA...CCAAGCTGGCAGGGGTCCACGCGCTGCTGCGGAAGCTGCAGTTCCTCTTTGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000533487.1
ENST00000534124.5
CDS-3UTR CCA 90 bp CCCAGGGTTTTTAAGTGGAACCGCCCCCTGCCCATGCTGGGCCCAGCACACCAGGGCAGTCGTCCTGGATaGCGCGGAACGAGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: PRVFKWNRPLPMLGPAHQGSRPG*RGTRAG
Trigger: ACCTGCCCTCGTTCCGCGCCATCCAGGACGACTGCC...CTGGTGTGCTGGGCCCAGCATGGGCAGGGGGCGGTTCCACTTAAAAACCCTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000279281.8
CDS-3UTR CCA 90 bp CACCTGCCTGCGGGGAAGGACCACCGAGACCAGATCCTGGGTGCCATGGGGTGCCCACCTGCACGTCGATaGCGGTGGTATCCTCCACCA +
Preference number: 4 (lower is better)
Translates to: HLPAGKDHRDQILGAMGCPPARR*RWYPPP
Trigger: TGGTGGAGGATACCACCGCCATCGACGTGCAGGTGG...GCACCCCATGGCACCCAGGATCTGGTCTCGGTGGTCCTTCCCCGCAGGCAGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279281.8
ENST00000533827.5
CDS-3UTR CCA 90 bp GCATGGCAGCGGCTGCGCCTAGCCGCGCTCGCAGATGACCTCAACCACACTGGGCTGGAGTCGCTGCTCTaGGCCTTGCGAACACCCTCT +
Preference number: 4 (lower is better)
Translates to: AWQRLRLAALADDLNHTGLESLL*ALRTPS
Trigger: AGAGGGTGTTCGCAAGGCCCAGAGCAGCGACTCCAG...CCCAGTGTGGTTGAGGTCATCTGCGAGCGCGGCTAGGCGCAGCCGCTGCCATGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530673.1
ENST00000533827.5
CDS-3UTR CCA 90 bp GACACCTGCCTGCGGGGAAGGACCACCGAGACCAGATCCTGGGTGCCATGGGGTAGATCCTGGGTGCCATaGGGTGCAGGGACAGACCGG +
Preference number: 4 (lower is better)
Translates to: DTCLRGRTTETRSWVPWGRSWVP*GAGTDR
Trigger: CCGGTCTGTCCCTGCACCCCATGGCACCCAGGATCT...ACCCCATGGCACCCAGGATCTGGTCTCGGTGGTCCTTCCCCGCAGGCAGGTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000279281.8
CDS-3UTR CCA 90 bp ACTTGCACCTGCTGCAGCCCGAAGCGCCCAAAGGTGCGCAGCCGCACACACTCCAGATCCTGGGTGCCATaGGGTGCAGGGACAGACCGG +
Preference number: 4 (lower is better)
Translates to: TCTCCSPKRPKVRSRTHSRSWVP*GAGTDR
Trigger: CCGGTCTGTCCCTGCACCCCATGGCACCCAGGATCT...GGAGTGTGTGCGGCTGCGCACCTTTGGGCGCTTCGGGCTGCAGCAGGTGCAAGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530673.1
ENST00000533827.5
CDS-3UTR TCA 90 bp TGCAGCGTGGCGCTGATGCGAGCGCTGAAGTCGGTGATCACTGCCATGTTGGTGCCCCTGCCAGCTTGGTaGTGCGCTCGTGGCGGTCCT +
Preference number: 4 (lower is better)
Translates to: CSVALMRALKSVITAMLVPLPAW*CARGGP
Trigger: AGGACCGCCACGAGCGCATCACCAAGCTGGCAGGGG...CACCAACATGGCAGTGATCACCGACTTCAGCGCTCGCATCAGCGCCACGCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533487.1
ENST00000534124.5
CDS-3UTR GCA 90 bp GATGCGCTCGTGGCGGTCCTGCAGCGTGGCGCTGATGCGAGCGCTGAAGTCGGTGAAGTCGGTGATCACTaGCATGTTGGTGGCCAGCCG +
Preference number: 4 (lower is better)
Translates to: DALVAVLQRGADASAEVGEVGDH*HVGGQP
Trigger: CGGCTGGCCACCAACATGGCAGTGATCACCGACTTC...ACCGACTTCAGCGCTCGCATCAGCGCCACGCTGCAGGACCGCCACGAGCGCATC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533487.1
ENST00000534124.5
CDS-3UTR GCA 90 bp CACCTGCCTGCGGGGAAGGACCACCGAGACCAGATCCTGGGTGCCATGGGGTGCCGCTGCTCTGGGCCTTaGGAACACCCTCTTCGTACA +
Preference number: 4 (lower is better)
Translates to: HLPAGKDHRDQILGAMGCRCSGP*EHPLRT
Trigger: TGTACGAAGAGGGTGTTCGCAAGGCCCAGAGCAGCG...GCACCCCATGGCACCCAGGATCTGGTCTCGGTGGTCCTTCCCCGCAGGCAGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279281.8
ENST00000533827.5
CDS-3UTR GCA 90 bp CGGCTGCGCCTAGCCGCGCTCGCAGATGACCTCAACCACACTGGGCTCCATGGGCGCTGCTCTGGGCCTTaGGAACACCCTCTTCGTACA +
Preference number: 4 (lower is better)
Translates to: RLRLAALADDLNHTGLHGRCSGP*EHPLRT
Trigger: TGTACGAAGAGGGTGTTCGCAAGGCCCAGAGCAGCG...CCCATGGAGCCCAGTGTGGTTGAGGTCATCTGCGAGCGCGGCTAGGCGCAGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530673.1
ENST00000533827.5
CDS-3UTR GCA 90 bp ACCACCGAGACCAGATCCTGGGTGCCATGGGGTGCAGGGACAGACCGGTGCATGCGAAGCGCCCAAAGGTaGGCAGCCGCACACACTCCA +
Preference number: 4 (lower is better)
Translates to: TTETRSWVPWGAGTDRCMRSAQR*AAAHTP
Trigger: TGGAGTGTGTGCGGCTGCGCACCTTTGGGCGCTTCG...CATGCACCGGTCTGTCCCTGCACCCCATGGCACCCAGGATCTGGTCTCGGTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279281.8
ENST00000530673.1
ENST00000533827.5
CDS-3UTR GCA 90 bp CACTTGCACCTGCTGCAGCCCGAAGCGCCCAAAGGTGCGCAGCCGCACACACTCTCCACTTGCACCTGCTaGAGCCCGAAGCGCCCAAAG +
Preference number: 4 (lower is better)
Translates to: HLHLLQPEAPKGAQPHTLSTCTC*SPKRPK
Trigger: CTTTGGGCGCTTCGGGCTGCAGCAGGTGCAAGTGGA...GAGTGTGTGCGGCTGCGCACCTTTGGGCGCTTCGGGCTGCAGCAGGTGCAAGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530673.1
ENST00000533827.5
CDS-3UTR GCA 90 bp TGCCTGCGGGGAAGGACCACCGAGACCAGATCCTGGGTGCCATGGGGTGCAGGGAAGTGGCAGTCCACTTaGACCTGCTGCAGCCCGAAG +
Preference number: 4 (lower is better)
Translates to: CLRGRTTETRSWVPWGAGKWQST*TCCSPK
Trigger: CTTCGGGCTGCAGCAGGTGCAAGTGGACTGCCACTT...CCCTGCACCCCATGGCACCCAGGATCTGGTCTCGGTGGTCCTTCCCCGCAGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279281.8
ENST00000530673.1
ENST00000533827.5
CDS-3UTR GCA 90 bp GGTATAGCTGGGGGCGTAGCGGCCCTGCTGCCGAGAGCTGCTGTACACGGAGAACTGGGTGCCATGGGGTaGAGGGACAGACCGGTGCAT +
Preference number: 4 (lower is better)
Translates to: GIAGGVAALLPRAAVHGELGAMG*RDRPVH
Trigger: ATGCACCGGTCTGTCCCTGCACCCCATGGCACCCAG...TTCTCCGTGTACAGCAGCTCTCGGCAGCAGGGCCGCTACGCCCCCAGCTATACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533827.5
CDS-3UTR CCA 90 bp AGCGCGTGGACCCCTGCCAGCTTGGTGATGCGCTCGTGGCGGTCCTGCAGCGTGTCACTGCCATGTTGGTaGCCAGCCGGTCCATCTCAT +
Preference number: 4 (lower is better)
Translates to: SAWTPASLVMRSWRSCSVSLPCW*PAGPSH
Trigger: ATGAGATGGACCGGCTGGCCACCAACATGGCAGTGA...CACGCTGCAGGACCGCCACGAGCGCATCACCAAGCTGGCAGGGGTCCACGCGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533487.1
ENST00000534124.5
CDS-3UTR CCA 90 bp ACGAGGGCAGGTGTTGGTACTGCTGCAGCACGGCCTGCGCGCGGCCCTGGTAGCTCACTGCCATGTTGGTaGCCAGCCGGTCCATCTCAT +
Preference number: 4 (lower is better)
Translates to: TRAGVGTAAARPARGPGSSLPCW*PAGPSH
Trigger: ATGAGATGGACCGGCTGGCCACCAACATGGCAGTGA...GCTACCAGGGCCGCGCGCAGGCCGTGCTGCAGCAGTACCAACACCTGCCCTCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533487.1
ENST00000534124.5
CDS-3UTR CCA 90 bp GATGACCTGGCAGTCGTCCTGGATGGCGCGGAACGAGGGCAGGTGTTGGTACTGCGGGCCGTGATGACCTaGCAGTCGTCCTGGATGGCG +
Preference number: 4 (lower is better)
Translates to: DDLAVVLDGAERGQVLVLRAVMT*QSSWMA
Trigger: CGCCATCCAGGACGACTGCCAGGTCATCACGGCCCG...CAGTACCAACACCTGCCCTCGTTCCGCGCCATCCAGGACGACTGCCAGGTCATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533487.1
ENST00000534124.5
CDS-3UTR CCA 90 bp AGGGCAGCAGAGGCCACCACTTCGTCCAGCAGCAAGTGCACGAGTTCTTCGTCGGCCGCGCCGTTTCCCTaGCCTCTGCACACAGCGTGC +
Preference number: 4 (lower is better)
Translates to: RAAEATTSSSSKCTSSSSAAPFP*PLHTAC
Trigger: GCACGCTGTGTGCAGAGGCCAGGGAAACGGCGCGGC...CGACGAAGAACTCGTGCACTTGCTGCTGGACGAAGTGGTGGCCTCTGCTGCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533827.5
CDS-3UTR CCA 90 bp GATCAGGCAGCTGGTCTGGGGTCTGGCCATGAGGGCACTGTCCAGCCATCTGCACACTGGGGGTATAGCTaGGGGCGTAGCGGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: DQAAGLGSGHEGTVQPSAHWGYS*GRSGPA
Trigger: AGCAGGGCCGCTACGCCCCCAGCTATACCCCCAGTG...TGCAGATGGCTGGACAGTGCCCTCATGGCCAGACCCCAGACCAGCTGCCTGATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000533827.5
CDS-3UTR CCA 90 bp GTCCACTTGCACCTGCTGCAGCCCGAAGCGCCCAAAGGTGCGCAGCCGCACACAGCTCACGGGCGTCACTaGGAACTGATCAGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: VHLHLLQPEAPKGAQPHTAHGRH*ELIRQL
Trigger: CAGCTGCCTGATCAGTTCCCAGTGACGCCCGTGAGC...TGTGTGCGGCTGCGCACCTTTGGGCGCTTCGGGCTGCAGCAGGTGCAAGTGGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533827.5
CDS-3UTR TCA 90 bp GCGCAGGGCAGCAGAGGCCACCACTTCGTCCAGCAGCAAGTGCACGAGTTCTTCAGCCGCGCTCGCAGATaGCCTCAACCACACTGGGCT +
Preference number: 4 (lower is better)
Translates to: AQGSRGHHFVQQQVHEFFSRARR*PQPHWA
Trigger: AGCCCAGTGTGGTTGAGGTCATCTGCGAGCGCGGCT...GAAGAACTCGTGCACTTGCTGCTGGACGAAGTGGTGGCCTCTGCTGCCCTGCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530673.1
ENST00000533827.5
CDS-3UTR TCA 90 bp GACCACCGAGACCAGATCCTGGGTGCCATGGGGTGCAGGGACAGACCGGTGCATTTATTAGGCCGGTCCTaGCACCTGCCTGCGGGGAAG +
Preference number: 4 (lower is better)
Translates to: DHRDQILGAMGCRDRPVHLLGRS*HLPAGK
Trigger: CTTCCCCGCAGGCAGGTGTCAGGACCGGCCTAATAA...ATGCACCGGTCTGTCCCTGCACCCCATGGCACCCAGGATCTGGTCTCGGTGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000279281.8
CDS-3UTR GCA 90 bp GGACCACCGAGACCAGATCCTGGGTGCCATGGGGTGCAGGGACAGACCGGTGCAGAAGTCGGTGATCACTaGCATGTTGGTGGCCAGCCG +
Preference number: 4 (lower is better)
Translates to: GPPRPDPGCHGVQGQTGAEVGDH*HVGGQP
Trigger: CGGCTGGCCACCAACATGGCAGTGATCACCGACTTC...TGCACCGGTCTGTCCCTGCACCCCATGGCACCCAGGATCTGGTCTCGGTGGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279281.8
CDS-3UTR GCA 90 bp GTGATCACTGCCATGTTGGTGGCCAGCCGGTCCATCTCATCCTCCATCTTCCGGCCCTCCCTAAAGCGCTaGCGCAGCTGCTGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: VITAMLVASRSISSSIFRPSLKR*RSCWAR
Trigger: CCTGGCCCAGCAGCTGCGGCAGCGCTTTAGGGAGGG...CCGGAAGATGGAGGATGAGATGGACCGGCTGGCCACCAACATGGCAGTGATCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534124.5
CDS-3UTR GCA 90 bp CAGAAAGTGGCAGTCCACTTGCACCTGCTGCAGCCCGAAGCGCCCAAAGGTGCGCCTCTGCACACAGCGTaGTCACGGGCGTCACTGGGA +
Preference number: 4 (lower is better)
Translates to: QKVAVHLHLLQPEAPKGAPLHTA*SRASLG
Trigger: TCCCAGTGACGCCCGTGAGCACGCTGTGTGCAGAGG...CGCACCTTTGGGCGCTTCGGGCTGCAGCAGGTGCAAGTGGACTGCCACTTTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533827.5
CDS-3UTR GCA 90 bp GTCCCAGGGTTTTTAAGTGGAACCGCCCCCTGCCCATGCTGGGCCCAGCACACCTACAGGAGCCCCACCTaGACGTCGATGGCGGTGGTA +
Preference number: 4 (lower is better)
Translates to: VPGFLSGTAPCPCWAQHTYRSPT*TSMAVV
Trigger: TACCACCGCCATCGACGTGCAGGTGGGGCTCCTGTA...GGTGTGCTGGGCCCAGCATGGGCAGGGGGCGGTTCCACTTAAAAACCCTGGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000279281.8
CDS-3UTR GCA 90 bp GGGAAGGACCACCGAGACCAGATCCTGGGTGCCATGGGGTGCAGGGACAGACCGCGGAGAAAGTCCTCTTaGTGGAGTCGCTGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: GKDHRDQILGAMGCRDRPRRKSS*WSRCSG
Trigger: CCCAGAGCAGCGACTCCAGCAAGAGGACTTTCTCCG...CGGTCTGTCCCTGCACCCCATGGCACCCAGGATCTGGTCTCGGTGGTCCTTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279281.8
ENST00000530673.1
ENST00000533827.5
CDS-3UTR GCA 90 bp ACTTGCACCTGCTGCAGCCCGAAGCGCCCAAAGGTGCGCAGCCGCACACACTCCCCTGCTGCCGAGAGCTaGTGTACACGGAGAAAGTCC +
Preference number: 4 (lower is better)
Translates to: TCTCCSPKRPKVRSRTHSPAAES*CTRRKS
Trigger: GGACTTTCTCCGTGTACAGCAGCTCTCGGCAGCAGG...GGAGTGTGTGCGGCTGCGCACCTTTGGGCGCTTCGGGCTGCAGCAGGTGCAAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530673.1
ENST00000533827.5
CDS-3UTR GCA 90 bp CCCAGGGTTTTTAAGTGGAACCGCCCCCTGCCCATGCTGGGCCCAGCACACCAGTCCACTTGCACCTGCTaGAGCCCGAAGCGCCCAAAG +
Preference number: 4 (lower is better)
Translates to: PRVFKWNRPLPMLGPAHQSTCTC*SPKRPK
Trigger: CTTTGGGCGCTTCGGGCTGCAGCAGGTGCAAGTGGA...CTGGTGTGCTGGGCCCAGCATGGGCAGGGGGCGGTTCCACTTAAAAACCCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000279281.8
CDS-3UTR GCA 90 bp CAGTCCACTTGCACCTGCTGCAGCCCGAAGCGCCCAAAGGTGCGCAGCCGCACAAAGTGGCAGTCCACTTaGACCTGCTGCAGCCCGAAG +
Preference number: 4 (lower is better)
Translates to: QSTCTCCSPKRPKVRSRTKWQST*TCCSPK
Trigger: CTTCGGGCTGCAGCAGGTGCAAGTGGACTGCCACTT...TGTGCGGCTGCGCACCTTTGGGCGCTTCGGGCTGCAGCAGGTGCAAGTGGACTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530673.1
ENST00000533827.5
CDS-3UTR GCA 90 bp GATGACCTGGCAGTCGTCCTGGATGGCGCGGAACGAGGGCAGGTGTTGGTACTGGCTCCCAAGCGCATCTaGGTGTCCAGCGCACTGCCT +
Preference number: 4 (lower is better)
Translates to: DDLAVVLDGAERGQVLVLAPKRI*VSSALP
Trigger: AGGCAGTGCGCTGGACACGCAGATGCGCTTGGGAGC...CAGTACCAACACCTGCCCTCGTTCCGCGCCATCCAGGACGACTGCCAGGTCATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534124.5
CDS-3UTR CCA 90 bp CACCTGCCTGCGGGGAAGGACCACCGAGACCAGATCCTGGGTGCCATGGGGTGCTCACTGCCATGTTGGTaGCCAGCCGGTCCATCTCAT +
Preference number: 4 (lower is better)
Translates to: HLPAGKDHRDQILGAMGCSLPCW*PAGPSH
Trigger: ATGAGATGGACCGGCTGGCCACCAACATGGCAGTGA...GCACCCCATGGCACCCAGGATCTGGTCTCGGTGGTCCTTCCCCGCAGGCAGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000279281.8
CDS-3UTR CCA 90 bp ACCTGCCTGCGGGGAAGGACCACCGAGACCAGATCCTGGGTGCCATGGGGTGCAGGATGTAGGAGATGGTaGCCGTCTCGTAGTCCAGGC +
Preference number: 4 (lower is better)
Translates to: TCLRGRTTETRSWVPWGAGCRRW*PSRSPG
Trigger: GCCTGGACTACGAGACGGCCACCATCTCCTACATCC...TGCACCCCATGGCACCCAGGATCTGGTCTCGGTGGTCCTTCCCCGCAGGCAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279281.8
ENST00000533827.5
CDS-3UTR CCA 90 bp GGGAAGGACCACCGAGACCAGATCCTGGGTGCCATGGGGTGCAGGGACAGACCGGGATGTAGGAGATGGTaGCCGTCTCGTAGTCCAGGC +
Preference number: 4 (lower is better)
Translates to: GKDHRDQILGAMGCRDRPGCRRW*PSRSPG
Trigger: GCCTGGACTACGAGACGGCCACCATCTCCTACATCC...CGGTCTGTCCCTGCACCCCATGGCACCCAGGATCTGGTCTCGGTGGTCCTTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279281.8
ENST00000533827.5
CDS-3UTR CCA 90 bp CAGAAAGTGGCAGTCCACTTGCACCTGCTGCAGCCCGAAGCGCCCAAAGGTGCGACCGAGACCAGATCCTaGGTGCCATGGGGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: QKVAVHLHLLQPEAPKGATETRS*VPWGAG
Trigger: CCCTGCACCCCATGGCACCCAGGATCTGGTCTCGGT...CGCACCTTTGGGCGCTTCGGGCTGCAGCAGGTGCAAGTGGACTGCCACTTTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530673.1
ENST00000533827.5
CDS-3UTR CCA 90 bp GGGAAGGACCACCGAGACCAGATCCTGGGTGCCATGGGGTGCAGGGACAGACCGCCCAGGGTTTTTAAGTaGAACCGCCCCCTGCCCATG +
Preference number: 4 (lower is better)
Translates to: GKDHRDQILGAMGCRDRPPRVFK*NRPLPM
Trigger: CATGGGCAGGGGGCGGTTCCACTTAAAAACCCTGGG...CGGTCTGTCCCTGCACCCCATGGCACCCAGGATCTGGTCTCGGTGGTCCTTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000279281.8
CDS-3UTR TCA 90 bp GCCAATCGGCGCTCGGGGGCGGACCCGACGCGGGCGCCTCAGAAGCCTCAGCTTGATGGTGTCTGTGGCTaGGATGAACTTGTTGTAGTT +
Preference number: 4 (lower is better)
Translates to: ANRRSGADPTRAPQKPQLDGVCG*DELVVV
Trigger: AACTACAACAAGTTCATCTCAGCCACAGACACCATC...AAGCTGAGGCTTCTGAGGCGCCCGCGTCGGGTCCGCCCCCGAGCGCCGATTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000279281.8
CDS-3UTR TCA 90 bp CCAGGGTTTTTAAGTGGAACCGCCCCCTGCCCATGCTGGGCCCAGCACACCAGCCTGTCGCAGAAGCTCTaGGCCGTCTGGCACATAGAG +
Preference number: 4 (lower is better)
Translates to: PGFLSGTAPCPCWAQHTSLSQKL*AVWHIE
Trigger: CTCTATGTGCCAGACGGCTCAGAGCTTCTGCGACAG...GCTGGTGTGCTGGGCCCAGCATGGGCAGGGGGCGGTTCCACTTAAAAACCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000279281.8
CDS-3UTR TCA 90 bp TGCAGAAAGTGGCAGTCCACTTGCACCTGCTGCAGCCCGAAGCGCCCAAAGGTGTCTGGGGTCTGGCCATaGGGGCACTGTCCAGCCATC +
Preference number: 4 (lower is better)
Translates to: CRKWQSTCTCCSPKRPKVSGVWP*GHCPAI
Trigger: GATGGCTGGACAGTGCCCTCATGGCCAGACCCCAGA...CACCTTTGGGCGCTTCGGGCTGCAGCAGGTGCAAGTGGACTGCCACTTTCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533827.5
CDS-3UTR GCA 90 bp GATCACTGCCATGTTGGTGGCCAGCCGGTCCATCTCATCCTCCATCTTCCGGAACGCTCGTGGCGGTCCTaGAGCGTGGCGCTGATGCGA +
Preference number: 4 (lower is better)
Translates to: DHCHVGGQPVHLILHLPERSWRS*SVALMR
Trigger: TCGCATCAGCGCCACGCTGCAGGACCGCCACGAGCG...TTCCGGAAGATGGAGGATGAGATGGACCGGCTGGCCACCAACATGGCAGTGATC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533487.1
ENST00000534124.5
CDS-3UTR GCA 90 bp GCGCTGATGCGAGCGCTGAAGTCGGTGATCACTGCCATGTTGGTGGCCAGCCGGAGCTCAAAGAGGAACTaGAGCTTCCGCAGCAGCGCG +
Preference number: 4 (lower is better)
Translates to: ALMRALKSVITAMLVASRSSKRN*SFRSSA
Trigger: CGCGCTGCTGCGGAAGCTGCAGTTCCTCTTTGAGCT...CCGGCTGGCCACCAACATGGCAGTGATCACCGACTTCAGCGCTCGCATCAGCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533487.1
ENST00000534124.5
CDS-3UTR GCA 90 bp GTGGCCAGCCGGTCCATCTCATCCTCCATCTTCCGGAAATCGTTCTTCATCTTCAAGCGCTGCCGCAGCTaGTGGGCCAGGCGGGCCGTG +
Preference number: 4 (lower is better)
Translates to: VASRSISSSIFRKSFFIFKRCRS*WARRAV
Trigger: CACGGCCCGCCTGGCCCAGCAGCTGCGGCAGCGCTT...GAAGATGAAGAACGATTTCCGGAAGATGGAGGATGAGATGGACCGGCTGGCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534124.5
CDS-3UTR GCA 90 bp GTCCCAGGGTTTTTAAGTGGAACCGCCCCCTGCCCATGCTGGGCCCAGCACACCCGGAGAAAGTCCTCTTaGTGGAGTCGCTGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: VPGFLSGTAPCPCWAQHTRRKSS*WSRCSG
Trigger: CCCAGAGCAGCGACTCCAGCAAGAGGACTTTCTCCG...GGTGTGCTGGGCCCAGCATGGGCAGGGGGCGGTTCCACTTAAAAACCCTGGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000279281.8
CDS-3UTR GCA 90 bp CTGCAGAAAGTGGCAGTCCACTTGCACCTGCTGCAGCCCGAAGCGCCCAAAGGTCAGTCCACTTGCACCTaGTGCAGCCCGAAGCGCCCA +
Preference number: 4 (lower is better)
Translates to: LQKVAVHLHLLQPEAPKGQSTCT*CSPKRP
Trigger: TGGGCGCTTCGGGCTGCAGCAGGTGCAAGTGGACTG...ACCTTTGGGCGCTTCGGGCTGCAGCAGGTGCAAGTGGACTGCCACTTTCTGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530673.1
ENST00000533827.5
CDS-3UTR GCA 90 bp CCCAGGGTTTTTAAGTGGAACCGCCCCCTGCCCATGCTGGGCCCAGCACACCAGTCGTCCAGCAGCAAGTaGACGAGTTCTTCGTCGGCC +
Preference number: 4 (lower is better)
Translates to: PRVFKWNRPLPMLGPAHQSSSSK*TSSSSA
Trigger: GGCCGACGAAGAACTCGTGCACTTGCTGCTGGACGA...CTGGTGTGCTGGGCCCAGCATGGGCAGGGGGCGGTTCCACTTAAAAACCCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000279281.8
CDS-3UTR GCA 90 bp AGAAAGTGGCAGTCCACTTGCACCTGCTGCAGCCCGAAGCGCCCAAAGGTGCGCAGACCAGATCCTGGGTaGCATGGGGTGCAGGGACAG +
Preference number: 4 (lower is better)
Translates to: RKWQSTCTCCSPKRPKVRRPDPG*HGVQGQ
Trigger: CTGTCCCTGCACCCCATGGCACCCAGGATCTGGTCT...GCGCACCTTTGGGCGCTTCGGGCTGCAGCAGGTGCAAGTGGACTGCCACTTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530673.1
ENST00000533827.5
CDS-3UTR CCA 90 bp GACACCTGCCTGCGGGGAAGGACCACCGAGACCAGATCCTGGGTGCCATGGGGTAGAGAGGCCTTAATGTaGCTCAGGATGGAGCTGGCC +
Preference number: 4 (lower is better)
Translates to: DTCLRGRTTETRSWVPWGREALM*LRMELA
Trigger: GGCCAGCTCCATCCTGAGCCACATTAAGGCCTCTCT...ACCCCATGGCACCCAGGATCTGGTCTCGGTGGTCCTTCCCCGCAGGCAGGTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000279281.8
CDS-3UTR CCA 90 bp CTCTTGCTGGAGTCGCTGCTCTGGGCCTTGCGAACACCCTCTTCGTACAGGAGCGCACGTCGATGGCGGTaGTATCCTCCACCACCCGCT +
Preference number: 4 (lower is better)
Translates to: LLLESLLWALRTPSSYRSARRWR*YPPPPA
Trigger: AGCGGGTGGTGGAGGATACCACCGCCATCGACGTGC...GCTCCTGTACGAAGAGGGTGTTCGCAAGGCCCAGAGCAGCGACTCCAGCAAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533827.5
CDS-3UTR CCA 90 bp AGAAAGTGGCAGTCCACTTGCACCTGCTGCAGCCCGAAGCGCCCAAAGGTGCGCCCACCTGCACGTCGATaGCGGTGGTATCCTCCACCA +
Preference number: 4 (lower is better)
Translates to: RKWQSTCTCCSPKRPKVRPPARR*RWYPPP
Trigger: TGGTGGAGGATACCACCGCCATCGACGTGCAGGTGG...GCGCACCTTTGGGCGCTTCGGGCTGCAGCAGGTGCAAGTGGACTGCCACTTTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533827.5
CDS-3UTR CCA 90 bp GCTGCAGAAAGTGGCAGTCCACTTGCACCTGCTGCAGCCCGAAGCGCCCAAAGGCTGGAGTCGCTGCTCTaGGCCTTGCGAACACCCTCT +
Preference number: 4 (lower is better)
Translates to: AAESGSPLAPAAARSAQRLESLL*ALRTPS
Trigger: AGAGGGTGTTCGCAAGGCCCAGAGCAGCGACTCCAG...CCTTTGGGCGCTTCGGGCTGCAGCAGGTGCAAGTGGACTGCCACTTTCTGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530673.1
ENST00000533827.5
CDS-3UTR CCA 90 bp AGGACCACCGAGACCAGATCCTGGGTGCCATGGGGTGCAGGGACAGACCGGTGCAGAAAGTCCTCTTGCTaGAGTCGCTGCTCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: RTTETRSWVPWGAGTDRCRKSSC*SRCSGP
Trigger: AGGCCCAGAGCAGCGACTCCAGCAAGAGGACTTTCT...GCACCGGTCTGTCCCTGCACCCCATGGCACCCAGGATCTGGTCTCGGTGGTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279281.8
ENST00000530673.1
ENST00000533827.5
CDS-3UTR CCA 90 bp CACTTGCACCTGCTGCAGCCCGAAGCGCCCAAAGGTGCGCAGCCGCACACACTCAGAAAGTCCTCTTGCTaGAGTCGCTGCTCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: HLHLLQPEAPKGAQPHTLRKSSC*SRCSGP
Trigger: AGGCCCAGAGCAGCGACTCCAGCAAGAGGACTTTCT...GAGTGTGTGCGGCTGCGCACCTTTGGGCGCTTCGGGCTGCAGCAGGTGCAAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530673.1
ENST00000533827.5
CDS-3UTR CCA 90 bp AGGCCACCACTTCGTCCAGCAGCAAGTGCACGAGTTCTTCGTCGGCCACAAAACGGACAGACCGGTGCATaGCAGCGGCTGCGCCTAGCC +
Preference number: 4 (lower is better)
Translates to: RPPLRPAASARVLRRPQNGQTGA*QRLRLA
Trigger: GGCTAGGCGCAGCCGCTGCCATGCACCGGTCTGTCC...GTTTTGTGGCCGACGAAGAACTCGTGCACTTGCTGCTGGACGAAGTGGTGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530673.1
ENST00000533827.5
CDS-3UTR CCA 90 bp GGCACTGTCCAGCCATCTGCATTCCCAGCAACACCATTCCCTGCCCGGCTAGGAACCGAGACCAGATCCTaGGTGCCATGGGGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: GTVQPSAFPATPFPARLGTETRS*VPWGAG
Trigger: CCCTGCACCCCATGGCACCCAGGATCTGGTCTCGGT...TCCTAGCCGGGCAGGGAATGGTGTTGCTGGGAATGCAGATGGCTGGACAGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533827.5
CDS-3UTR TCA 90 bp ACCACCGAGACCAGATCCTGGGTGCCATGGGGTGCAGGGACAGACCGGTGCATGACACCTCTTTGGCGGTaGAAAGGTGCACTGCTGCCA +
Preference number: 4 (lower is better)
Translates to: TTETRSWVPWGAGTDRCMTPLWR*KGALLP
Trigger: TGGCAGCAGTGCACCTTTTCACCGCCAAAGAGGTGT...CATGCACCGGTCTGTCCCTGCACCCCATGGCACCCAGGATCTGGTCTCGGTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279281.8
CDS-3UTR TCA 90 bp AGGCCACCACTTCGTCCAGCAGCAAGTGCACGAGTTCTTCGTCGGCCACAAAACGGACGAAGCCCACGATaGGGCCCTCACGGACACCCT +
Preference number: 4 (lower is better)
Translates to: RPPLRPAASARVLRRPQNGRSPR*GPHGHP
Trigger: AGGGTGTCCGTGAGGGCCTCATCGTGGGCTTCGTCC...GTTTTGTGGCCGACGAAGAACTCGTGCACTTGCTGCTGGACGAAGTGGTGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533827.5
CDS-3UTR TCA 90 bp CAGAAAGTGGCAGTCCACTTGCACCTGCTGCAGCCCGAAGCGCCCAAAGGTGCGCTGTCGCAGAAGCTCTaGGCCGTCTGGCACATAGAG +
Preference number: 4 (lower is better)
Translates to: QKVAVHLHLLQPEAPKGALSQKL*AVWHIE
Trigger: CTCTATGTGCCAGACGGCTCAGAGCTTCTGCGACAG...CGCACCTTTGGGCGCTTCGGGCTGCAGCAGGTGCAAGTGGACTGCCACTTTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533827.5
CDS-3UTR GCA 90 bp GAAAGTGGCAGTCCACTTGCACCTGCTGCAGCCCGAAGCGCCCAAAGGTGCGCACCTGCTGCCGAGAGCTaGTGTACACGGAGAAAGTCC +
Preference number: 4 (lower is better)
Translates to: ESGSPLAPAAARSAQRCAPAAES*CTRRKS
Trigger: GGACTTTCTCCGTGTACAGCAGCTCTCGGCAGCAGG...TGCGCACCTTTGGGCGCTTCGGGCTGCAGCAGGTGCAAGTGGACTGCCACTTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530673.1
ENST00000533827.5
CDS-3UTR GCA 90 bp GCAAGTGCACGAGTTCTTCGTCGGCCACAAAACGCCACAGGTAGAGCTGCAGAAGCAGGGACAGACCGGTaGATGGCAGCGGCTGCGCCT +
Preference number: 4 (lower is better)
Translates to: ASARVLRRPQNATGRAAEAGTDR*MAAAAP
Trigger: AGGCGCAGCCGCTGCCATGCACCGGTCTGTCCCTGC...TTCTGCAGCTCTACCTGTGGCGTTTTGTGGCCGACGAAGAACTCGTGCACTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530673.1
ENST00000533827.5
CDS-3UTR CCA 90 bp TGCAGCGTGGCGCTGATGCGAGCGCTGAAGTCGGTGATCACTGCCATGTTGGTGAACGAGGGCAGGTGTTaGTACTGCTGCAGCACGGCC +
Preference number: 4 (lower is better)
Translates to: CSVALMRALKSVITAMLVNEGRC*YCCSTA
Trigger: GGCCGTGCTGCAGCAGTACCAACACCTGCCCTCGTT...CACCAACATGGCAGTGATCACCGACTTCAGCGCTCGCATCAGCGCCACGCTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533487.1
ENST00000534124.5
CDS-3UTR CCA 90 bp GCCATGTTGGTGGCCAGCCGGTCCATCTCATCCTCCATCTTCCGGAAATCGTTCGGCAGTCGTCCTGGATaGCGCGGAACGAGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: AMLVASRSISSSIFRKSFGSRPG*RGTRAG
Trigger: ACCTGCCCTCGTTCCGCGCCATCCAGGACGACTGCC...GAACGATTTCCGGAAGATGGAGGATGAGATGGACCGGCTGGCCACCAACATGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533487.1
ENST00000534124.5
CDS-3UTR CCA 90 bp CCCAGGGTTTTTAAGTGGAACCGCCCCCTGCCCATGCTGGGCCCAGCACACCAGGTCTGGCACATAGAGTaGACGAAGCCCACGATGAGG +
Preference number: 4 (lower is better)
Translates to: PRVFKWNRPLPMLGPAHQVWHIE*TKPTMR
Trigger: CCTCATCGTGGGCTTCGTCCACTCTATGTGCCAGAC...CTGGTGTGCTGGGCCCAGCATGGGCAGGGGGCGGTTCCACTTAAAAACCCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000279281.8
CDS-3UTR CCA 90 bp GGACCACCGAGACCAGATCCTGGGTGCCATGGGGTGCAGGGACAGACCGGTGCATATTGCTCAAGAGGTTaGTGTCCATCGGGGCACTGG +
Preference number: 4 (lower is better)
Translates to: GPPRPDPGCHGVQGQTGAYCSRG*CPSGHW
Trigger: CCAGTGCCCCGATGGACACCAACCTCTTGAGCAATA...TGCACCGGTCTGTCCCTGCACCCCATGGCACCCAGGATCTGGTCTCGGTGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279281.8
ENST00000530673.1
ENST00000533827.5
CDS-3UTR CCA 90 bp ACCTGCCTGCGGGGAAGGACCACCGAGACCAGATCCTGGGTGCCATGGGGTGCATATTGCTCAAGAGGTTaGTGTCCATCGGGGCACTGG +
Preference number: 4 (lower is better)
Translates to: TCLRGRTTETRSWVPWGAYCSRG*CPSGHW
Trigger: CCAGTGCCCCGATGGACACCAACCTCTTGAGCAATA...TGCACCCCATGGCACCCAGGATCTGGTCTCGGTGGTCCTTCCCCGCAGGCAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000279281.8
ENST00000530673.1
ENST00000533827.5
CDS-3UTR CCA 90 bp GTTCTTCGTCGGCCACAAAACGCCACAGGTAGAGCTGCAGAAAGTGGCAGTCCAGGACAGACCGGTGCATaGCAGCGGCTGCGCCTAGCC +
Preference number: 4 (lower is better)
Translates to: VLRRPQNATGRAAESGSPGQTGA*QRLRLA
Trigger: GGCTAGGCGCAGCCGCTGCCATGCACCGGTCTGTCC...TGGACTGCCACTTTCTGCAGCTCTACCTGTGGCGTTTTGTGGCCGACGAAGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530673.1
ENST00000533827.5
CDS-3UTR CCA 90 bp TGGCAGTCCACTTGCACCTGCTGCAGCCCGAAGCGCCCAAAGGTGCGCAGCCGCCACGATGGAAGTAGCTaGGATGAGGCAGAAAGTCTC +
Preference number: 4 (lower is better)
Translates to: WQSTCTCCSPKRPKVRSRHDGSS*DEAESL
Trigger: GAGACTTTCTGCCTCATCCCAGCTACTTCCATCGTG...GCGGCTGCGCACCTTTGGGCGCTTCGGGCTGCAGCAGGTGCAAGTGGACTGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530673.1
CDS-3UTR TCA 90 bp AGGCCACCACTTCGTCCAGCAGCAAGTGCACGAGTTCTTCGTCGGCCACAAAACAGCCGCGCTCGCAGATaGCCTCAACCACACTGGGCT +
Preference number: 4 (lower is better)
Translates to: RPPLRPAASARVLRRPQNSRARR*PQPHWA
Trigger: AGCCCAGTGTGGTTGAGGTCATCTGCGAGCGCGGCT...GTTTTGTGGCCGACGAAGAACTCGTGCACTTGCTGCTGGACGAAGTGGTGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530673.1
ENST00000533827.5
CDS-3UTR GCA 90 bp GGGAAGGACCACCGAGACCAGATCCTGGGTGCCATGGGGTGCAGGGACAGACCGGAAAAGGTGCACTGCTaGCAGAGAGGCCTTAATGTG +
Preference number: 4 (lower is better)
Translates to: GKDHRDQILGAMGCRDRPEKVHC*QRGLNV
Trigger: CACATTAAGGCCTCTCTGGCAGCAGTGCACCTTTTC...CGGTCTGTCCCTGCACCCCATGGCACCCAGGATCTGGTCTCGGTGGTCCTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000279281.8
CDS-3UTR GCA 90 bp GGGGAAGGACCACCGAGACCAGATCCTGGGTGCCATGGGGTGCAGGGACAGACCGGTGAAAAGGTGCACTaGTGCCAGAGAGGCCTTAAT +
Preference number: 4 (lower is better)
Translates to: GEGPPRPDPGCHGVQGQTGEKVH*CQRGLN
Trigger: ATTAAGGCCTCTCTGGCAGCAGTGCACCTTTTCACC...GGTCTGTCCCTGCACCCCATGGCACCCAGGATCTGGTCTCGGTGGTCCTTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000279281.8
CDS-3UTR GCA 90 bp AGGGCAGCAGAGGCCACCACTTCGTCCAGCAGCAAGTGCACGAGTTCTTCGTCGTCTTGCTGGAGTCGCTaGTCTGGGCCTTGCGAACAC +
Preference number: 4 (lower is better)
Translates to: RAAEATTSSSSKCTSSSSSCWSR*SGPCEH
Trigger: GTGTTCGCAAGGCCCAGAGCAGCGACTCCAGCAAGA...CGACGAAGAACTCGTGCACTTGCTGCTGGACGAAGTGGTGGCCTCTGCTGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530673.1
ENST00000533827.5
CDS-3UTR GCA 90 bp AGGGCAGCAGAGGCCACCACTTCGTCCAGCAGCAAGTGCACGAGTTCTTCGTCGTCGTCCAGCAGCAAGTaGACGAGTTCTTCGTCGGCC +
Preference number: 4 (lower is better)
Translates to: RAAEATTSSSSKCTSSSSSSSSK*TSSSSA
Trigger: GGCCGACGAAGAACTCGTGCACTTGCTGCTGGACGA...CGACGAAGAACTCGTGCACTTGCTGCTGGACGAAGTGGTGGCCTCTGCTGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530673.1
ENST00000533827.5
CDS-3UTR GCA 90 bp CGTGATGACCTGGCAGTCGTCCTGGATGGCGCGGAACGAGGGCAGGTGTTGGTAAGGTGCTTAGCCAGCTaGCACCACTGTGCCTCAACT +
Preference number: 4 (lower is better)
Translates to: RDDLAVVLDGAERGQVLVRCLAS*HHCAST
Trigger: AGTTGAGGCACAGTGGTGGCAGCTGGCTAAGCACCT...TACCAACACCTGCCCTCGTTCCGCGCCATCCAGGACGACTGCCAGGTCATCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534124.5
CDS-3UTR CCA 90 bp ACCACCGAGACCAGATCCTGGGTGCCATGGGGTGCAGGGACAGACCGGTGCATGAAGCCACTGCCTCCATaGTCGGTGAACTCTAACACG +
Preference number: 4 (lower is better)
Translates to: TTETRSWVPWGAGTDRCMKPLPP*SVNSNT
Trigger: CGTGTTAGAGTTCACCGACCATGGAGGCAGTGGCTT...CATGCACCGGTCTGTCCCTGCACCCCATGGCACCCAGGATCTGGTCTCGGTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279281.8
CDS-3UTR CCA 90 bp CGGGGAAGGACCACCGAGACCAGATCCTGGGTGCCATGGGGTGCAGGGACAGACGGAAGTAGGGCTTGTTaGAGAAGGACACCTCTTTGG +
Preference number: 4 (lower is better)
Translates to: RGRTTETRSWVPWGAGTDGSRAC*RRTPLW
Trigger: CCAAAGAGGTGTCCTTCTCCAACAAGCCCTACTTCC...GTCTGTCCCTGCACCCCATGGCACCCAGGATCTGGTCTCGGTGGTCCTTCCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000279281.8
CDS-3UTR CCA 90 bp GCTGCAGAAAGTGGCAGTCCACTTGCACCTGCTGCAGCCCGAAGCGCCCAAAGGGTCTGGCACATAGAGTaGACGAAGCCCACGATGAGG +
Preference number: 4 (lower is better)
Translates to: AAESGSPLAPAAARSAQRVWHIE*TKPTMR
Trigger: CCTCATCGTGGGCTTCGTCCACTCTATGTGCCAGAC...CCTTTGGGCGCTTCGGGCTGCAGCAGGTGCAAGTGGACTGCCACTTTCTGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533827.5
CDS-3UTR GCA 90 bp GCAAGTGCACGAGTTCTTCGTCGGCCACAAAACGCCACAGGTAGAGCTGCAGAACGAAGCGCCCAAAGGTaGGCAGCCGCACACACTCCA +
Preference number: 4 (lower is better)
Translates to: ASARVLRRPQNATGRAAERSAQR*AAAHTP
Trigger: TGGAGTGTGTGCGGCTGCGCACCTTTGGGCGCTTCG...TTCTGCAGCTCTACCTGTGGCGTTTTGTGGCCGACGAAGAACTCGTGCACTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530673.1
ENST00000533827.5
CDS-3UTR GCA 90 bp GCAGCAAGTGCACGAGTTCTTCGTCGGCCACAAAACGCCACAGGTAGAGCTGCATCCACTTGCACCTGCTaGAGCCCGAAGCGCCCAAAG +
Preference number: 4 (lower is better)
Translates to: AASARVLRRPQNATGRAASTCTC*SPKRPK
Trigger: CTTTGGGCGCTTCGGGCTGCAGCAGGTGCAAGTGGA...TGCAGCTCTACCTGTGGCGTTTTGTGGCCGACGAAGAACTCGTGCACTTGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530673.1
ENST00000533827.5
CDS-3UTR GCA 90 bp GTTCTTCGTCGGCCACAAAACGCCACAGGTAGAGCTGCAGAAAGTGGCAGTCCACAGTCCACTTGCACCTaGTGCAGCCCGAAGCGCCCA +
Preference number: 4 (lower is better)
Translates to: VLRRPQNATGRAAESGSPQSTCT*CSPKRP
Trigger: TGGGCGCTTCGGGCTGCAGCAGGTGCAAGTGGACTG...TGGACTGCCACTTTCTGCAGCTCTACCTGTGGCGTTTTGTGGCCGACGAAGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530673.1
ENST00000533827.5
CDS-3UTR GCA 90 bp CCCAGTTCCACGCACTTGGTGAGGCGCGAGGGCAGCTCAAAGAGGAACTGCAGCCCACTGTGCCTCAACTaGTCCATCAGACCACAAGCA +
Preference number: 4 (lower is better)
Translates to: PSSTHLVRREGSSKRNCSPLCLN*SIRPQA
Trigger: TGCTTGTGGTCTGATGGAGCAGTTGAGGCACAGTGG...GCTGCAGTTCCTCTTTGAGCTGCCCTCGCGCCTCACCAAGTGCGTGGAACTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534124.5
CDS-3UTR CCA 90 bp GATCACTGCCATGTTGGTGGCCAGCCGGTCCATCTCATCCTCCATCTTCCGGAAAACGAGGGCAGGTGTTaGTACTGCTGCAGCACGGCC +
Preference number: 4 (lower is better)
Translates to: DHCHVGGQPVHLILHLPENEGRC*YCCSTA
Trigger: GGCCGTGCTGCAGCAGTACCAACACCTGCCCTCGTT...TTCCGGAAGATGGAGGATGAGATGGACCGGCTGGCCACCAACATGGCAGTGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533487.1
ENST00000534124.5
CDS-3UTR CCA 90 bp TCTGGCCATGAGGGCACTGTCCAGCCATCTGCATTCCCAGCAACACCATTCCCTATCAGGCAGCTGGTCTaGGGTCTGGCCATGAGGGCA +
Preference number: 4 (lower is better)
Translates to: SGHEGTVQPSAFPATPFPIRQLV*GLAMRA
Trigger: TGCCCTCATGGCCAGACCCCAGACCAGCTGCCTGAT...AGGGAATGGTGTTGCTGGGAATGCAGATGGCTGGACAGTGCCCTCATGGCCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533827.5
CDS-3UTR GCA 90 bp AGGCCACCACTTCGTCCAGCAGCAAGTGCACGAGTTCTTCGTCGGCCACAAAACCGCTGCTCTGGGCCTTaGGAACACCCTCTTCGTACA +
Preference number: 4 (lower is better)
Translates to: RPPLRPAASARVLRRPQNRCSGP*EHPLRT
Trigger: TGTACGAAGAGGGTGTTCGCAAGGCCCAGAGCAGCG...GTTTTGTGGCCGACGAAGAACTCGTGCACTTGCTGCTGGACGAAGTGGTGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530673.1
ENST00000533827.5
CDS-3UTR GCA 90 bp TCTGGCCATGAGGGCACTGTCCAGCCATCTGCATTCCCAGCAACACCATTCCCTTCGTCCAGCAGCAAGTaGACGAGTTCTTCGTCGGCC +
Preference number: 4 (lower is better)
Translates to: SGHEGTVQPSAFPATPFPSSSSK*TSSSSA
Trigger: GGCCGACGAAGAACTCGTGCACTTGCTGCTGGACGA...AGGGAATGGTGTTGCTGGGAATGCAGATGGCTGGACAGTGCCCTCATGGCCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533827.5
CDS-3UTR GCA 90 bp GCTGAAGTCGGTGATCACTGCCATGTTGGTGGCCAGCCGGTCCATCTCATCCTCCAGCTGCCACCACTGTaGCTCAACTGCTCCATCAGA +
Preference number: 4 (lower is better)
Translates to: AEVGDHCHVGGQPVHLILQLPPL*LNCSIR
Trigger: TCTGATGGAGCAGTTGAGGCACAGTGGTGGCAGCTG...GAGGATGAGATGGACCGGCTGGCCACCAACATGGCAGTGATCACCGACTTCAGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534124.5
CDS-3UTR GCA 90 bp GCTGCAGAAAGTGGCAGTCCACTTGCACCTGCTGCAGCCCGAAGCGCCCAAAGGCACTGTCCAGCCATCTaGATTCCCAGCAACACCATT +
Preference number: 4 (lower is better)
Translates to: AAESGSPLAPAAARSAQRHCPAI*IPSNTI
Trigger: AATGGTGTTGCTGGGAATGCAGATGGCTGGACAGTG...CCTTTGGGCGCTTCGGGCTGCAGCAGGTGCAAGTGGACTGCCACTTTCTGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533827.5
CDS-3UTR CCA 90 bp GTGATGACCTGGCAGTCGTCCTGGATGGCGCGGAACGAGGGCAGGTGTTGGTACTCTTCATCTTCCGGATaGTGTATACTCCCCGTAACC +
Preference number: 4 (lower is better)
Translates to: VMTWQSSWMARNEGRCWYSSSSG*CILPVT
Trigger: GGTTACGGGGAGTATACACCATCCGGAAGATGAAGA...GTACCAACACCTGCCCTCGTTCCGCGCCATCCAGGACGACTGCCAGGTCATCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534124.5
3UTR CAA 72 bp AGCCGCACACACTCCAGCAGCGTCTTCAGGCTGATCTaGATGATGCCGGTCAGCACCGACACCTTGTTGAAC +
Preference number: 4 (lower is better)
Translates to: SRTHSSSVFRLI*MMPVSTDTLLN
Trigger: GTTCAACAAGGTGTCGGTGCTGACCGGCATCATCAAGATCAGCCTGAAGACGCTGCTGGAGTGTGTGCGGCT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533827.5
CDS-3UTR TCA 90 bp TACGTTCAGAGAATAGCTTCTGGATATTGCTCAAGAGGTTGGTGTCCATCGGGGGGGGCTCCAGAGTGCTaGGCCAGTCGCGAGTCTCCA +
Preference number: 4 (lower is better)
Translates to: YVQRIASGYCSRGWCPSGGAPEC*ASRESP
Trigger: TGGAGACTCGCGACTGGCTCAGCACTCTGGAGCCCC...CCCCGATGGACACCAACCTCTTGAGCAATATCCAGAAGCTATTCTCTGAACGTA
56% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533827.5
CDS-3UTR GCA 90 bp CCGGTCAGCACCGACACCTTGTTGAACTCCACAGGGCTGAACACATCAATACGTTCTTGCTGGAGTCGCTaGTCTGGGCCTTGCGAACAC +
Preference number: 4 (lower is better)
Translates to: PVSTDTLLNSTGLNTSIRSCWSR*SGPCEH
Trigger: GTGTTCGCAAGGCCCAGAGCAGCGACTCCAGCAAGA...ACGTATTGATGTGTTCAGCCCTGTGGAGTTCAACAAGGTGTCGGTGCTGACCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533827.5
CDS-3UTR GCA 90 bp CAGCGTCTTCAGGCTGATCTTGATGATGCCGGTCAGCACCGACACCTTGTTGAACGGAGAAAGTCCTCTTaGTGGAGTCGCTGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: QRLQADLDDAGQHRHLVERRKSS*WSRCSG
Trigger: CCCAGAGCAGCGACTCCAGCAAGAGGACTTTCTCCG...TTCAACAAGGTGTCGGTGCTGACCGGCATCATCAAGATCAGCCTGAAGACGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533827.5
CDS-3UTR CCA 90 bp CTGATCTTGATGATGCCGGTCAGCACCGACACCTTGTTGAACTCCACAGGGCTGAGAAAGTCCTCTTGCTaGAGTCGCTGCTCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: LILMMPVSTDTLLNSTGLRKSSC*SRCSGP
Trigger: AGGCCCAGAGCAGCGACTCCAGCAAGAGGACTTTCT...CAGCCCTGTGGAGTTCAACAAGGTGTCGGTGCTGACCGGCATCATCAAGATCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533827.5
CDS-3UTR CCA 90 bp AGGCCACCACTTCGTCCAGCAGCAAGTGCACGAGTTCTTCGTCGGCCACAAAACTATTGCTCAAGAGGTTaGTGTCCATCGGGGCACTGG +
Preference number: 4 (lower is better)
Translates to: RPPLRPAASARVLRRPQNYCSRG*CPSGHW
Trigger: CCAGTGCCCCGATGGACACCAACCTCTTGAGCAATA...GTTTTGTGGCCGACGAAGAACTCGTGCACTTGCTGCTGGACGAAGTGGTGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530673.1
ENST00000533827.5
CDS-3UTR CCA 90 bp GACCACCGAGACCAGATCCTGGGTGCCATGGGGTGCAGGGACAGACCGGTGCATTCAGAGAATAGCTTCTaGATATTGCTCAAGAGGTTG +
Preference number: 4 (lower is better)
Translates to: DHRDQILGAMGCRDRPVHSENSF*ILLKRL
Trigger: CAACCTCTTGAGCAATATCCAGAAGCTATTCTCTGA...ATGCACCGGTCTGTCCCTGCACCCCATGGCACCCAGGATCTGGTCTCGGTGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279281.8
ENST00000530673.1
ENST00000533827.5
CDS-3UTR CCA 90 bp ACCACCGAGACCAGATCCTGGGTGCCATGGGGTGCAGGGACAGACCGGTGCATGTCAGAGAATAGCTTCTaGATATTGCTCAAGAGGTTG +
Preference number: 4 (lower is better)
Translates to: TTETRSWVPWGAGTDRCMSENSF*ILLKRL
Trigger: CAACCTCTTGAGCAATATCCAGAAGCTATTCTCTGA...CATGCACCGGTCTGTCCCTGCACCCCATGGCACCCAGGATCTGGTCTCGGTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279281.8
ENST00000530673.1
ENST00000533827.5
CDS-3UTR TCA 90 bp TTGAACTCCACAGGGCTGAACACATCAATACGTTCAGAGAATAGCTTCTGGATACCACCACCCGCTTCATaGCGGCCCGCACATTCCGGG +
Preference number: 4 (lower is better)
Translates to: LNSTGLNTSIRSENSFWIPPPAS*RPAHSG
Trigger: CCCGGAATGTGCGGGCCGTCATGAAGCGGGTGGTGG...TATCCAGAAGCTATTCTCTGAACGTATTGATGTGTTCAGCCCTGTGGAGTTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533827.5
CDS-3UTR GCA 90 bp TTGTTGAACTCCACAGGGCTGAACACATCAATACGTTCAGAGAATAGCTTCTGGAAGTGGCAGTCCACTTaGACCTGCTGCAGCCCGAAG +
Preference number: 4 (lower is better)
Translates to: LLNSTGLNTSIRSENSFWKWQST*TCCSPK
Trigger: CTTCGGGCTGCAGCAGGTGCAAGTGGACTGCCACTT...CCAGAAGCTATTCTCTGAACGTATTGATGTGTTCAGCCCTGTGGAGTTCAACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533827.5
CDS-3UTR GCA 90 bp TTGAACTCCACAGGGCTGAACACATCAATACGTTCAGAGAATAGCTTCTGGATAAGACCAGATCCTGGGTaGCATGGGGTGCAGGGACAG +
Preference number: 4 (lower is better)
Translates to: LNSTGLNTSIRSENSFWIRPDPG*HGVQGQ
Trigger: CTGTCCCTGCACCCCATGGCACCCAGGATCTGGTCT...TATCCAGAAGCTATTCTCTGAACGTATTGATGTGTTCAGCCCTGTGGAGTTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533827.5
CDS-3UTR CCA 90 bp CCAGCAGCAAGTGCACGAGTTCTTCGTCGGCCACAAAACGCCACAGGTAGAGCTTCAGAGAATAGCTTCTaGATATTGCTCAAGAGGTTG +
Preference number: 4 (lower is better)
Translates to: PAASARVLRRPQNATGRASENSF*ILLKRL
Trigger: CAACCTCTTGAGCAATATCCAGAAGCTATTCTCTGA...AGCTCTACCTGTGGCGTTTTGTGGCCGACGAAGAACTCGTGCACTTGCTGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530673.1
ENST00000533827.5
3UTR CAA 72 bp AACACATCAATACGTTCAGAGAATAGCTTCTGGATATaGCTCAAGAGGTTGGTGTCCATCGGGGCACTGGGG +
Preference number: 4 (lower is better)
Translates to: NTSIRSENSFWI*LKRLVSIGALG
Trigger: CCCCAGTGCCCCGATGGACACCAACCTCTTGAGCAATATCCAGAAGCTATTCTCTGAACGTATTGATGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533827.5
CDS CCA 90 bp GGTGGTGGCCCAGGCGCTCGCGGGCCACTCGTTCCACGATCTCCGTaGCAGCGTCTGCGAGCCCGGCAGCGGCCAGCAGGGCCCCGGGAG +
Preference number: 5 (lower is better)
Translates to: GGGPGARGPLVPRSP*QRLRARQRPAGPRE
Trigger: CTCCCGGGGCCCTGCTGGCCGCTGCCGGGCTCGCAGACGCTGCCACGGAGATCGTGGAACGAGTGGCCCGCGAGCGCCTGGGCCACCACC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279281.8
ENST00000527646.5
CDS GCA 90 bp GCGGCTGCCCAGCTGCCGGGCGAAGGCCGCCAGCTTCTCGGCACCTaGTGGGCCCTGGGCCGCAAACAGCTCCTGGTAGGCCGCCGCCAC +
Preference number: 5 (lower is better)
Translates to: AAAQLPGEGRQLLGT*WALGRKQLLVGRRH
Trigger: GTGGCGGCGGCCTACCAGGAGCTGTTTGCGGCCCAGGGCCCAGCAGGTGCCGAGAAGCTGGCGGCCTTCGCCCGGCAGCTGGGCAGCCGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279281.8
ENST00000527646.5
CDS CCA 90 bp GCTGCCCAGCTGCCGGGCGAAGGCCGCCAGCTTCTCGGCACCTGCTaGGCCCTGGGCCGCAAACAGCTCCTGGTAGGCCGCCGCCACCTG +
Preference number: 5 (lower is better)
Translates to: AAQLPGEGRQLLGTC*ALGRKQLLVGRRHL
Trigger: CAGGTGGCGGCGGCCTACCAGGAGCTGTTTGCGGCCCAGGGCCCAGCAGGTGCCGAGAAGCTGGCGGCCTTCGCCCGGCAGCTGGGCAGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279281.8
ENST00000527646.5
CDS TCA 90 bp AGCCCGCAAGCGCCGGTGGAAGCGGTCCAGCGCCCGCACCAGCAGTaGGTTGTCACCACCACCCTGCTCCTGCGCCAGCCGCCGCTCCAC +
Preference number: 5 (lower is better)
Translates to: SPQAPVEAVQRPHQQ*VVTTTLLLRQPPLH
Trigger: GTGGAGCGGCGGCTGGCGCAGGAGCAGGGTGGTGGTGACAACTCACTGCTGGTGCGGGCGCTGGACCGCTTCCACCGGCGCTTGCGGGCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279281.8
ENST00000527646.5
CDS GCA 90 bp CCTGCTCCTGCGCCAGCCGCCGCTCCACCAGCGCAAAATAGCGGCTaGCCAGCTGCCGGGCGAAGGCCGCCAGCTTCTCGGCACCTGCTG +
Preference number: 5 (lower is better)
Translates to: PAPAPAAAPPAQNSG*PAAGRRPPASRHLL
Trigger: CAGCAGGTGCCGAGAAGCTGGCGGCCTTCGCCCGGCAGCTGGGCAGCCGCTATTTTGCGCTGGTGGAGCGGCGGCTGGCGCAGGAGCAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279281.8
ENST00000527646.5
CDS GCA 90 bp CAGCAACTCGGCCAGGCCAGGGCCCTCCTTCCCAGCCACGCGAGGTaGTGCCAGCGCCTGGCGGACGTCTGTCAGGCAGCCCAGGAAGGC +
Preference number: 5 (lower is better)
Translates to: QQLGQARALLPSHAR*CQRLADVCQAAQEG
Trigger: GCCTTCCTGGGCTGCCTGACAGACGTCCGCCAGGCGCTGGCAGCACCTCGCGTGGCTGGGAAGGAGGGCCCTGGCCTGGCCGAGTTGCTG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279281.8
ENST00000527646.5
CDS CCA 90 bp GGCCCTGCCCGGCAGCGCCCACCTGCCAGCTTGGTGATGCGCTCGTaGCGGTCCTGCAGCGTGGCGCTGATGCGAGCGCTGAAGTCGGTG +
Preference number: 5 (lower is better)
Translates to: GPARQRPPASLVMRS*RSCSVALMRALKSV
Trigger: CACCGACTTCAGCGCTCGCATCAGCGCCACGCTGCAGGACCGCCACGAGCGCATCACCAAGCTGGCAGGTGGGCGCTGCCGGGCAGGGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529180.1
CDS-3UTR CAA 90 bp GCCAATCGGCGCTCGGGGGCGGACCCGACGCGGGCGCCTCAGAAGCCTCAGCTTTGGACCCCTGCCAGCTaGGTGATGCGCTCGTGGCGG +
Preference number: 5 (lower is better)
Translates to: ANRRSGADPTRAPQKPQLWTPAS*VMRSWR
Trigger: CCGCCACGAGCGCATCACCAAGCTGGCAGGGGTCCA...AAGCTGAGGCTTCTGAGGCGCCCGCGTCGGGTCCGCCCCCGAGCGCCGATTGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000279281.8
CDS-3UTR CAA 90 bp GGTGTTGGTACTGCTGCAGCACGGCCTGCGCGCGGCCCTGGTAGCGCACCGCCTTGGACCCCTGCCAGCTaGGTGATGCGCTCGTGGCGG +
Preference number: 5 (lower is better)
Translates to: GVGTAAARPARGPGSAPPWTPAS*VMRSWR
Trigger: CCGCCACGAGCGCATCACCAAGCTGGCAGGGGTCCA...AGGCGGTGCGCTACCAGGGCCGCGCGCAGGCCGTGCTGCAGCAGTACCAACACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533487.1
ENST00000534124.5
CDS GCA 90 bp CCCCCAGCCTGCGTCAGGGCTACCCCGGCCAGCCTGGGCAGCACCTaGACGTCGATGGCGGTGGTATCCTCCACCACCCGCTTCATGACG +
Preference number: 5 (lower is better)
Translates to: PPACVRATPASLGST*TSMAVVSSTTRFMT
Trigger: CGTCATGAAGCGGGTGGTGGAGGATACCACCGCCATCGACGTGCAGGTGCTGCCCAGGCTGGCCGGGGTAGCCCTGACGCAGGCTGGGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534591.1
CDS GCA 90 bp CGGCAGCGCCCACCTGCCAGCTTGGTGATGCGCTCGTGGCGGTCCTaGAGCGTGGCGCTGATGCGAGCGCTGAAGTCGGTGATCACTGCC +
Preference number: 5 (lower is better)
Translates to: RQRPPASLVMRSWRS*SVALMRALKSVITA
Trigger: GGCAGTGATCACCGACTTCAGCGCTCGCATCAGCGCCACGCTGCAGGACCGCCACGAGCGCATCACCAAGCTGGCAGGTGGGCGCTGCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529180.1
CDS-3UTR CAA 90 bp GCGCACCGCCTGCCCATAGGCGCCCAGTTCCACGCACTTGGTGAGGCGCGAGGGGAACGAGGGCAGGTGTaGGTACTGCTGCAGCACGGC +
Preference number: 5 (lower is better)
Translates to: AHRLPIGAQFHALGEARGERGQV*VLLQHG
Trigger: GCCGTGCTGCAGCAGTACCAACACCTGCCCTCGTTC...CCCTCGCGCCTCACCAAGTGCGTGGAACTGGGCGCCTATGGGCAGGCGGTGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533487.1
ENST00000534124.5
CDS-3UTR CAA 90 bp CGGGGAAGGACCACCGAGACCAGATCCTGGGTGCCATGGGGTGCAGGGACAGACCCCAGTTCCACGCACTaGGTGAGGCGCGAGGGCAGC +
Preference number: 5 (lower is better)
Translates to: RGRTTETRSWVPWGAGTDPSSTH*VRREGS
Trigger: GCTGCCCTCGCGCCTCACCAAGTGCGTGGAACTGGG...GTCTGTCCCTGCACCCCATGGCACCCAGGATCTGGTCTCGGTGGTCCTTCCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000279281.8
CDS GCA 90 bp AGTTCCACGCACTTGGTGAGGCGCGAGGGCAGCTCAAAGAGGAACTaGAGCTTCCGCAGCAGCGCGTGGACCCCTGGGGGACGGAGGGTG +
Preference number: 5 (lower is better)
Translates to: SSTHLVRREGSSKRN*SFRSSAWTPGGRRV
Trigger: CACCCTCCGTCCCCCAGGGGTCCACGCGCTGCTGCGGAAGCTGCAGTTCCTCTTTGAGCTGCCCTCGCGCCTCACCAAGTGCGTGGAACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529180.1
CDS-3UTR CAA 90 bp TGGATGGCGCGGAACGAGGGCAGGTGTTGGTACTGCTGCAGCACGGCCTGCGCGGAACGAGGGCAGGTGTaGGTACTGCTGCAGCACGGC +
Preference number: 5 (lower is better)
Translates to: WMARNEGRCWYCCSTACAERGQV*VLLQHG
Trigger: GCCGTGCTGCAGCAGTACCAACACCTGCCCTCGTTC...CGCGCAGGCCGTGCTGCAGCAGTACCAACACCTGCCCTCGTTCCGCGCCATCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533487.1
ENST00000534124.5
CDS-3UTR CAA 90 bp CACCTGCCTGCGGGGAAGGACCACCGAGACCAGATCCTGGGTGCCATGGGGTGCCGCACCAGCAGTGAGTaGTCACCACCACCCTGCTCC +
Preference number: 5 (lower is better)
Translates to: HLPAGKDHRDQILGAMGCRTSSE*SPPPCS
Trigger: GGAGCAGGGTGGTGGTGACAACTCACTGCTGGTGCG...GCACCCCATGGCACCCAGGATCTGGTCTCGGTGGTCCTTCCCCGCAGGCAGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000279281.8
CDS-3UTR CAA 90 bp GCTGATGCGAGCGCTGAAGTCGGTGATCACTGCCATGTTGGTGGCCAGCCGGTCTGGACCCCTGCCAGCTaGGTGATGCGCTCGTGGCGG +
Preference number: 5 (lower is better)
Translates to: ADASAEVGDHCHVGGQPVWTPAS*VMRSWR
Trigger: CCGCCACGAGCGCATCACCAAGCTGGCAGGGGTCCA...GACCGGCTGGCCACCAACATGGCAGTGATCACCGACTTCAGCGCTCGCATCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533487.1
ENST00000534124.5
CDS-3UTR CAA 90 bp ACCTGCCTGCGGGGAAGGACCACCGAGACCAGATCCTGGGTGCCATGGGGTGCAATGGAGCTGGCCACATaGGCCAGCAACTCGGCCAGG +
Preference number: 5 (lower is better)
Translates to: TCLRGRTTETRSWVPWGAMELAT*ASNSAR
Trigger: CCTGGCCGAGTTGCTGGCCAATGTGGCCAGCTCCAT...TGCACCCCATGGCACCCAGGATCTGGTCTCGGTGGTCCTTCCCCGCAGGCAGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000279281.8
CDS-3UTR CAA 90 bp ACCAGCCAATCGGCGCTCGGGGGCGGACCCGACGCGGGCGCCTCAGAAGCCTCAGAGAAGGACACCTCTTaGGCGGTGAAAAGGTGCACT +
Preference number: 5 (lower is better)
Translates to: TSQSALGGGPDAGASEASEKDTS*AVKRCT
Trigger: AGTGCACCTTTTCACCGCCAAAGAGGTGTCCTTCTC...TGAGGCTTCTGAGGCGCCCGCGTCGGGTCCGCCCCCGAGCGCCGATTGGCTGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000279281.8
CDS-3UTR CAA 90 bp GCCAATCGGCGCTCGGGGGCGGACCCGACGCGGGCGCCTCAGAAGCCTCAGCTTATATTGCTCAAGAGGTaGGTGTCCATCGGGGCACTG +
Preference number: 5 (lower is better)
Translates to: ANRRSGADPTRAPQKPQLILLKR*VSIGAL
Trigger: CAGTGCCCCGATGGACACCAACCTCTTGAGCAATAT...AAGCTGAGGCTTCTGAGGCGCCCGCGTCGGGTCCGCCCCCGAGCGCCGATTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000279281.8
CDS GCA 90 bp GGGTCAGCAGCCGCCGCGCCGTTTCCCTGGCCTCTGCACACAGCGTaGTCACGGGCGTCACTGGGAACTGATCCTGCACCAGAAACTGTT +
Preference number: 5 (lower is better)
Translates to: GSAAAAPFPWPLHTA*SRASLGTDPAPETV
Trigger: AACAGTTTCTGGTGCAGGATCAGTTCCCAGTGACGCCCGTGAGCACGCTGTGTGCAGAGGCCAGGGAAACGGCGCGGCGGCTGCTGACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279281.8
ENST00000526856.5
ENST00000527646.5
ENST00000531146.1
ENST00000534591.1
CDS GCA 90 bp AGCAGGCCGCAGGTGCTTAGCCAGCTGCCACCACTGTGCCTCAACTaGTCCATCAGACCACAAGCAGCCAAGGCAGGGACCGCTGGCTCC +
Preference number: 5 (lower is better)
Translates to: SRPQVLSQLPPLCLN*SIRPQAAKAGTAGS
Trigger: GGAGCCAGCGGTCCCTGCCTTGGCTGCTTGTGGTCTGATGGAGCAGTTGAGGCACAGTGGTGGCAGCTGGCTAAGCACCTGCGGCCTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533656.1
ENST00000534124.5
CDS CCA 90 bp CCTCAACTGCTCCATCAGACCACAAGCAGCCAAGGCAGGGACCGCTaGCTCCCAAGCGCATCTGCGTGTCCAGCGCACTGCCTGTGGCTG +
Preference number: 5 (lower is better)
Translates to: PQLLHQTTSSQGRDR*LPSASACPAHCLWL
Trigger: CAGCCACAGGCAGTGCGCTGGACACGCAGATGCGCTTGGGAGCCAGCGGTCCCTGCCTTGGCTGCTTGTGGTCTGATGGAGCAGTTGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533656.1
ENST00000534124.5
CDS-3UTR CAA 90 bp TGCAGCGTGGCGCTGATGCGAGCGCTGAAGTCGGTGATCACTGCCATGTTGGTGCCCAGTTCCACGCACTaGGTGAGGCGCGAGGGCAGC +
Preference number: 5 (lower is better)
Translates to: CSVALMRALKSVITAMLVPSSTH*VRREGS
Trigger: GCTGCCCTCGCGCCTCACCAAGTGCGTGGAACTGGG...CACCAACATGGCAGTGATCACCGACTTCAGCGCTCGCATCAGCGCCACGCTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533487.1
ENST00000534124.5
CDS-3UTR CAA 90 bp GACCACCGAGACCAGATCCTGGGTGCCATGGGGTGCAGGGACAGACCGGTGCATGAACGAGGGCAGGTGTaGGTACTGCTGCAGCACGGC +
Preference number: 5 (lower is better)
Translates to: DHRDQILGAMGCRDRPVHERGQV*VLLQHG
Trigger: GCCGTGCTGCAGCAGTACCAACACCTGCCCTCGTTC...ATGCACCGGTCTGTCCCTGCACCCCATGGCACCCAGGATCTGGTCTCGGTGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279281.8
CDS-3UTR CAA 90 bp GGGGAAGGACCACCGAGACCAGATCCTGGGTGCCATGGGGTGCAGGGACAGACCTCGCTGCTCTGGGCCTaGCGAACACCCTCTTCGTAC +
Preference number: 5 (lower is better)
Translates to: GEGPPRPDPGCHGVQGQTSLLWA*RTPSSY
Trigger: GTACGAAGAGGGTGTTCGCAAGGCCCAGAGCAGCGA...GGTCTGTCCCTGCACCCCATGGCACCCAGGATCTGGTCTCGGTGGTCCTTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279281.8
ENST00000530673.1
ENST00000533827.5
CDS-3UTR CAA 90 bp ACCACCGAGACCAGATCCTGGGTGCCATGGGGTGCAGGGACAGACCGGTGCATGTCGCTGCTCTGGGCCTaGCGAACACCCTCTTCGTAC +
Preference number: 5 (lower is better)
Translates to: TTETRSWVPWGAGTDRCMSLLWA*RTPSSY
Trigger: GTACGAAGAGGGTGTTCGCAAGGCCCAGAGCAGCGA...CATGCACCGGTCTGTCCCTGCACCCCATGGCACCCAGGATCTGGTCTCGGTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279281.8
ENST00000530673.1
ENST00000533827.5
CDS-3UTR CAA 90 bp CAGACCGGTGCATGGCAGCGGCTGCGCCTAGCCGCGCTCGCAGATGACCTCAACGTCTTCAGGCTGATCTaGATGATGCCGGTCAGCACC +
Preference number: 5 (lower is better)
Translates to: QTGAWQRLRLAALADDLNVFRLI*MMPVST
Trigger: GGTGCTGACCGGCATCATCAAGATCAGCCTGAAGAC...GTTGAGGTCATCTGCGAGCGCGGCTAGGCGCAGCCGCTGCCATGCACCGGTCTG
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530673.1
ENST00000533827.5
CDS GCA 90 bp CAGATCCGAAGCAGGCCGCAGGTGCTTAGCCAGCTGCCACCACTGTaGCTCAACTGCTCCATCAGACCACAAGCAGCCAAGGCAGGGACC +
Preference number: 5 (lower is better)
Translates to: QIRSRPQVLSQLPPL*LNCSIRPQAAKAGT
Trigger: GGTCCCTGCCTTGGCTGCTTGTGGTCTGATGGAGCAGTTGAGGCACAGTGGTGGCAGCTGGCTAAGCACCTGCGGCCTGCTTCGGATCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533656.1
ENST00000534124.5
CDS GCA 90 bp AGTTCCACGCACTTGGTGAGGCGCGAGGGCAGCTCAAAGAGGAACTaGAGCTTCCGCAGCAGCGCGTGGACCCCTGTGGCTGAGATGAAC +
Preference number: 5 (lower is better)
Translates to: SSTHLVRREGSSKRN*SFRSSAWTPVAEMN
Trigger: GTTCATCTCAGCCACAGGGGTCCACGCGCTGCTGCGGAAGCTGCAGTTCCTCTTTGAGCTGCCCTCGCGCCTCACCAAGTGCGTGGAACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530773.5
CDS-3UTR CAA 90 bp GTCCCAGGGTTTTTAAGTGGAACCGCCCCCTGCCCATGCTGGGCCCAGCACACCGTCAGCACCGACACCTaGTTGAACTCCACAGGGCTG +
Preference number: 5 (lower is better)
Translates to: VPGFLSGTAPCPCWAQHTVSTDT*LNSTGL
Trigger: CAGCCCTGTGGAGTTCAACAAGGTGTCGGTGCTGAC...GGTGTGCTGGGCCCAGCATGGGCAGGGGGCGGTTCCACTTAAAAACCCTGGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000279281.8
CDS-3UTR CAA 90 bp GGGGAAGGACCACCGAGACCAGATCCTGGGTGCCATGGGGTGCAGGGACAGACCGTCTTCAGGCTGATCTaGATGATGCCGGTCAGCACC +
Preference number: 5 (lower is better)
Translates to: GEGPPRPDPGCHGVQGQTVFRLI*MMPVST
Trigger: GGTGCTGACCGGCATCATCAAGATCAGCCTGAAGAC...GGTCTGTCCCTGCACCCCATGGCACCCAGGATCTGGTCTCGGTGGTCCTTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279281.8
ENST00000530673.1
ENST00000533827.5
CDS-3UTR CAA 90 bp GGGAAGGACCACCGAGACCAGATCCTGGGTGCCATGGGGTGCAGGGACAGACCGAGCGCCGTCATCTTGTaGAACTCCACAGGGCTGAAC +
Preference number: 5 (lower is better)
Translates to: GKDHRDQILGAMGCRDRPSAVIL*NSTGLN
Trigger: GTTCAGCCCTGTGGAGTTCAACAAGATGACGGCGCT...CGGTCTGTCCCTGCACCCCATGGCACCCAGGATCTGGTCTCGGTGGTCCTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530673.1
CDS CCA 90 bp GAGCTGCTGTACACGGAGAAAGTCCTCTTGCTGGAGTCGCTGCTCTaGGCCTTGCGAACACCCTCTTCGTACAGGAGCCCCACCTGGTGG +
Preference number: 5 (lower is better)
Translates to: ELLYTEKVLLLESLL*ALRTPSSYRSPTWW
Trigger: CCACCAGGTGGGGCTCCTGTACGAAGAGGGTGTTCGCAAGGCCCAGAGCAGCGACTCCAGCAAGAGGACTTTCTCCGTGTACAGCAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534591.1
CDS-3UTR CAA 90 bp CTGCGGGGAAGGACCACCGAGACCAGATCCTGGGTGCCATGGGGTGCAGGGACAATATTGCTCAAGAGGTaGGTGTCCATCGGGGCACTG +
Preference number: 5 (lower is better)
Translates to: LRGRTTETRSWVPWGAGTILLKR*VSIGAL
Trigger: CAGTGCCCCGATGGACACCAACCTCTTGAGCAATAT...TGTCCCTGCACCCCATGGCACCCAGGATCTGGTCTCGGTGGTCCTTCCCCGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000279281.8
ENST00000530673.1
ENST00000533827.5
CDS-3UTR CAA 90 bp CGGCGCTCGGGGGCGGACCCGACGCGGGCGCCTCAGAAGCCTCAGCTTCAAAACAATAGCTTCTGGATATaGCTCAAGAGGTTGGTGTCC +
Preference number: 5 (lower is better)
Translates to: RRSGADPTRAPQKPQLQNNSFWI*LKRLVS
Trigger: GGACACCAACCTCTTGAGCAATATCCAGAAGCTATT...GTTTTGAAGCTGAGGCTTCTGAGGCGCCCGCGTCGGGTCCGCCCCCGAGCGCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000279281.8
CDS-3UTR CAA 90 bp ACCACCGAGACCAGATCCTGGGTGCCATGGGGTGCAGGGACAGACCGGTGCATGAGCACCGACACCTTGTaGAACTCCACAGGGCTGAAC +
Preference number: 5 (lower is better)
Translates to: TTETRSWVPWGAGTDRCMSTDTL*NSTGLN
Trigger: GTTCAGCCCTGTGGAGTTCAACAAGGTGTCGGTGCT...CATGCACCGGTCTGTCCCTGCACCCCATGGCACCCAGGATCTGGTCTCGGTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279281.8
ENST00000533827.5
CDS-3UTR CAA 90 bp CAGAAAGTGGCAGTCCACTTGCACCTGCTGCAGCCCGAAGCGCCCAAAGGTGCGGTCTTCAGGCTGATCTaGATGATGCCGGTCAGCACC +
Preference number: 5 (lower is better)
Translates to: QKVAVHLHLLQPEAPKGAVFRLI*MMPVST
Trigger: GGTGCTGACCGGCATCATCAAGATCAGCCTGAAGAC...CGCACCTTTGGGCGCTTCGGGCTGCAGCAGGTGCAAGTGGACTGCCACTTTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530673.1
ENST00000533827.5
CDS CCA 90 bp TCTTTGGCGGTGAAAAGGTGCACTGCTGCCAGAGAGGCCTTAATGTaGCTCAGGATGGAGCTGGCCACATTGGCCAGCAACTCGGCCAGG +
Preference number: 5 (lower is better)
Translates to: SLAVKRCTAAREALM*LRMELATLASNSAR
Trigger: CCTGGCCGAGTTGCTGGCCAATGTGGCCAGCTCCATCCTGAGCCACATTAAGGCCTCTCTGGCAGCAGTGCACCTTTTCACCGCCAAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279281.8
ENST00000527646.5
CDS-3UTR CAA 90 bp GTCTGGGGTCTGGCCATGAGGGCACTGTCCAGCCATCTGCATTCCCAGCAACACAGCACCGACACCTTGTaGAACTCCACAGGGCTGAAC +
Preference number: 5 (lower is better)
Translates to: VWGLAMRALSSHLHSQQHSTDTL*NSTGLN
Trigger: GTTCAGCCCTGTGGAGTTCAACAAGGTGTCGGTGCT...GTGTTGCTGGGAATGCAGATGGCTGGACAGTGCCCTCATGGCCAGACCCCAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533827.5
CDS GCA 90 bp GGGCTTGTTGGAGAAGGACACCTCTTTGGCGGTGAAAAGGTGCACTaGTGCCAGAGAGGCCTTAATGTGGCTCAGGATGGAGCTGGCCAC +
Preference number: 5 (lower is better)
Translates to: GLVGEGHLFGGEKVH*CQRGLNVAQDGAGH
Trigger: GTGGCCAGCTCCATCCTGAGCCACATTAAGGCCTCTCTGGCAGCAGTGCACCTTTTCACCGCCAAAGAGGTGTCCTTCTCCAACAAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279281.8
ENST00000527646.5
CDS-3UTR CAA 90 bp AGGGCAGCAGAGGCCACCACTTCGTCCAGCAGCAAGTGCACGAGTTCTTCGTCGATATTGCTCAAGAGGTaGGTGTCCATCGGGGCACTG +
Preference number: 5 (lower is better)
Translates to: RAAEATTSSSSKCTSSSSILLKR*VSIGAL
Trigger: CAGTGCCCCGATGGACACCAACCTCTTGAGCAATAT...CGACGAAGAACTCGTGCACTTGCTGCTGGACGAAGTGGTGGCCTCTGCTGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530673.1
ENST00000533827.5
CDS-3UTR CAA 90 bp AGTCCACTTGCACCTGCTGCAGCCCGAAGCGCCCAAAGGTGCGCAGCCGCACACAATAGCTTCTGGATATaGCTCAAGAGGTTGGTGTCC +
Preference number: 5 (lower is better)
Translates to: SPLAPAAARSAQRCAAAHNSFWI*LKRLVS
Trigger: GGACACCAACCTCTTGAGCAATATCCAGAAGCTATT...GTGTGCGGCTGCGCACCTTTGGGCGCTTCGGGCTGCAGCAGGTGCAAGTGGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530673.1
ENST00000533827.5
CDS-3UTR CAA 90 bp CGGGGCTCCAGAGTGCTGAGCCAGTCGCGAGTCTCCACGCTCTTGCGCAGCATCAATAGCTTCTGGATATaGCTCAAGAGGTTGGTGTCC +
Preference number: 5 (lower is better)
Translates to: RGSRVLSQSRVSTLLRSINSFWI*LKRLVS
Trigger: GGACACCAACCTCTTGAGCAATATCCAGAAGCTATT...GATGCTGCGCAAGAGCGTGGAGACTCGCGACTGGCTCAGCACTCTGGAGCCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533827.5
CDS-3UTR CAA 90 bp GAGGCCACCACTTCGTCCAGCAGCAAGTGCACGAGTTCTTCGTCGGCCACAAAAGTCAGCACCGACACCTaGTTGAACTCCACAGGGCTG +
Preference number: 5 (lower is better)
Translates to: EATTSSSSKCTSSSSATKVSTDT*LNSTGL
Trigger: CAGCCCTGTGGAGTTCAACAAGGTGTCGGTGCTGAC...TTTTGTGGCCGACGAAGAACTCGTGCACTTGCTGCTGGACGAAGTGGTGGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533827.5
CDS-3UTR CAA 90 bp AGGGCAGCAGAGGCCACCACTTCGTCCAGCAGCAAGTGCACGAGTTCTTCGTCGATTAGCGCCGTCATCTaGTTGAACTCCACAGGGCTG +
Preference number: 5 (lower is better)
Translates to: RAAEATTSSSSKCTSSSSISAVI*LNSTGL
Trigger: CAGCCCTGTGGAGTTCAACAAGATGACGGCGCTAAT...CGACGAAGAACTCGTGCACTTGCTGCTGGACGAAGTGGTGGCCTCTGCTGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530673.1
CDS CCA 90 bp GCTCCAGCCAACCCTCCCCGGGATCCCTGGAAGTCTGAGTCACGTTaGAAGTCGGACCTTGTTGAACTCCACAGGGCTGAACACATCAAT +
Preference number: 5 (lower is better)
Translates to: APANPPRDPWKSESR*KSDLVELHRAEHIN
Trigger: ATTGATGTGTTCAGCCCTGTGGAGTTCAACAAGGTCCGACTTCCAACGTGACTCAGACTTCCAGGGATCCCGGGGAGGGTTGGCTGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526856.5
CDS TCA 90 bp GACGCCTCAGCTGCTCGTACTCCCTGGCCGAGGTTCGTCCTCTTATaGACACCTGCTCTCCTGAACCTCACAAAAAGTCGGAGGCATGAT +
Preference number: 5 (lower is better)
Translates to: DASAARTPWPRFVLL*TPALLNLTKSRRHD
Trigger: ATCATGCCTCCGACTTTTTGTGAGGTTCAGGAGAGCAGGTGTTCATAAGAGGACGAACCTCGGCCAGGGAGTACGAGCAGCTGAGGCGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526578.5
CDS GCA 90 bp CTTGTTGGAGAAGGACACCTCTTTGGCGGTGAAAAGGTGCACTGCTaGCAGAGAGGCCTTAATGTGGCTCAGGATGGAGCTGGCCACATT +
Preference number: 5 (lower is better)
Translates to: LVGEGHLFGGEKVHC*QRGLNVAQDGAGHI
Trigger: AATGTGGCCAGCTCCATCCTGAGCCACATTAAGGCCTCTCTGGCAGCAGTGCACCTTTTCACCGCCAAAGAGGTGTCCTTCTCCAACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279281.8
ENST00000527646.5
CDS TCA 90 bp ATAGAACCAGTGGAGTGGGGCAAAGGCAGGATACAAGAGTTGGTCTaGGGTCTAATCTTCAGCACCAGCACCAACCCTGCCCTGACTTCC +
Preference number: 5 (lower is better)
Translates to: IEPVEWGKGRIQELV*GLIFSTSTNPALTS
Trigger: GGAAGTCAGGGCAGGGTTGGTGCTGGTGCTGAAGATTAGACCTCAGACCAACTCTTGTATCCTGCCTTTGCCCCACTCCACTGGTTCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534591.1
CDS TCA 90 bp GTACTCCCTGGCCGAGGTTCGTCCTCTTATGAACACCTGCTCTCCTaGACCTCACAAAAAGTCGGAGGCATGATCTGGGGGAGCAATATA +
Preference number: 5 (lower is better)
Translates to: VLPGRGSSSYEHLLS*TSQKVGGMIWGSNI
Trigger: TATATTGCTCCCCCAGATCATGCCTCCGACTTTTTGTGAGGTTCAGGAGAGCAGGTGTTCATAAGAGGACGAACCTCGGCCAGGGAGTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000526578.5
CDS CCA 90 bp GGATCACAGGGTAATCACCGCGGGGCCCGCTATTTAGTAGGTACATaGTCGCTATTTATAGAACCAGTGGAGTGGGGCAAAGGCAGGATA +
Preference number: 5 (lower is better)
Translates to: GSQGNHRGARYLVGT*SLFIEPVEWGKGRI
Trigger: TATCCTGCCTTTGCCCCACTCCACTGGTTCTATAAATAGCGACCATGTACCTACTAAATAGCGGGCCCCGCGGTGATTACCCTGTGATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534591.1
CDS GCA 90 bp CTGGGAATGCCTTCCAGCTATGCAGCTGGGTCCTCATCTCTCATCTaGCTAAGACTTGCTGTAAATCTAGACCACGCCCCTCAACTTTTC +
Preference number: 5 (lower is better)
Translates to: LGMPSSYAAGSSSLI*LRLAVNLDHAPQLF
Trigger: GAAAAGTTGAGGGGCGTGGTCTAGATTTACAGCAAGTCTTAGGCAGATGAGAGATGAGGACCCAGCTGCATAGCTGGAAGGCATTCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528588.5
CDS GCA 72 bp GCGCCAGCCGCCGCTCCACCAGCGCAAAATAGCGGCTaGCCAGCTGCCGGGCGAAGGCCGCCAGCTTCTCGG +
Preference number: 6 (lower is better)
Translates to: APAAAPPAQNSG*PAAGRRPPASR
Trigger: CCGAGAAGCTGGCGGCCTTCGCCCGGCAGCTGGGCAGCCGCTATTTTGCGCTGGTGGAGCGGCGGCTGGCGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279281.8
ENST00000527646.5
CDS CCA 72 bp CTGCCGGGCGAAGGCCGCCAGCTTCTCGGCACCTGCTaGGCCCTGGGCCGCAAACAGCTCCTGGTAGGCCGC +
Preference number: 6 (lower is better)
Translates to: LPGEGRQLLGTC*ALGRKQLLVGR
Trigger: GCGGCCTACCAGGAGCTGTTTGCGGCCCAGGGCCCAGCAGGTGCCGAGAAGCTGGCGGCCTTCGCCCGGCAG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279281.8
ENST00000527646.5
CDS CAA 72 bp ACTGCAGGCCCTGCCCGGCAGCGCCCACCTGCCAGCTaGGTGATGCGCTCGTGGCGGTCCTGCAGCGTGGCG +
Preference number: 6 (lower is better)
Translates to: TAGPARQRPPAS*VMRSWRSCSVA
Trigger: CGCCACGCTGCAGGACCGCCACGAGCGCATCACCAAGCTGGCAGGTGGGCGCTGCCGGGCAGGGCCTGCAGT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529180.1
CDS CAA 90 bp CGCAAGCGCCGGTGGAAGCGGTCCAGCGCCCGCACCAGCAGTGAGTaGTCACCACCACCCTGCTCCTGCGCCAGCCGCCGCTCCACCAGC +
Preference number: 6 (lower is better)
Translates to: RKRRWKRSSARTSSE*SPPPCSCASRRSTS
Trigger: GCTGGTGGAGCGGCGGCTGGCGCAGGAGCAGGGTGGTGGTGACAACTCACTGCTGGTGCGGGCGCTGGACCGCTTCCACCGGCGCTTGCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279281.8
ENST00000527646.5
CDS TCA 72 bp GCGCCGGTGGAAGCGGTCCAGCGCCCGCACCAGCAGTaGGTTGTCACCACCACCCTGCTCCTGCGCCAGCCG +
Preference number: 6 (lower is better)
Translates to: APVEAVQRPHQQ*VVTTTLLLRQP
Trigger: CGGCTGGCGCAGGAGCAGGGTGGTGGTGACAACTCACTGCTGGTGCGGGCGCTGGACCGCTTCCACCGGCGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279281.8
ENST00000527646.5
CDS GCA 72 bp AAGGCCCACTGCAGGCCCTGCCCGGCAGCGCCCACCTaGCAGCTTGGTGATGCGCTCGTGGCGGTCCTGCAG +
Preference number: 6 (lower is better)
Translates to: KAHCRPCPAAPT*QLGDALVAVLQ
Trigger: CTGCAGGACCGCCACGAGCGCATCACCAAGCTGGCAGGTGGGCGCTGCCGGGCAGGGCCTGCAGTGGGCCTT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529180.1
CDS CCA 72 bp CGGCAGCGCCCACCTGCCAGCTTGGTGATGCGCTCGTaGCGGTCCTGCAGCGTGGCGCTGATGCGAGCGCTG +
Preference number: 6 (lower is better)
Translates to: RQRPPASLVMRS*RSCSVALMRAL
Trigger: CAGCGCTCGCATCAGCGCCACGCTGCAGGACCGCCACGAGCGCATCACCAAGCTGGCAGGTGGGCGCTGCCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529180.1
CDS CAA 72 bp CGGTGGAAGCGGTCCAGCGCCCGCACCAGCAGTGAGTaGTCACCACCACCCTGCTCCTGCGCCAGCCGCCGC +
Preference number: 6 (lower is better)
Translates to: RWKRSSARTSSE*SPPPCSCASRR
Trigger: GCGGCGGCTGGCGCAGGAGCAGGGTGGTGGTGACAACTCACTGCTGGTGCGGGCGCTGGACCGCTTCCACCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279281.8
ENST00000527646.5
CDS CAA 90 bp GAAAGGCCCACTGCAGGCCCTGCCCGGCAGCGCCCACCTGCCAGCTaGGTGATGCGCTCGTGGCGGTCCTGCAGCGTGGCGCTGATGCGA +
Preference number: 6 (lower is better)
Translates to: ERPTAGPARQRPPAS*VMRSWRSCSVALMR
Trigger: TCGCATCAGCGCCACGCTGCAGGACCGCCACGAGCGCATCACCAAGCTGGCAGGTGGGCGCTGCCGGGCAGGGCCTGCAGTGGGCCTTTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529180.1
CDS GCA 72 bp TGCGTCAGGGCTACCCCGGCCAGCCTGGGCAGCACCTaGACGTCGATGGCGGTGGTATCCTCCACCACCCGC +
Preference number: 6 (lower is better)
Translates to: CVRATPASLGST*TSMAVVSSTTR
Trigger: GCGGGTGGTGGAGGATACCACCGCCATCGACGTGCAGGTGCTGCCCAGGCTGGCCGGGGTAGCCCTGACGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534591.1
CDS GCA 72 bp GCCGCCGCGCCGTTTCCCTGGCCTCTGCACACAGCGTaGTCACGGGCGTCACTGGGAACTGATCCTGCACCA +
Preference number: 6 (lower is better)
Translates to: AAAPFPWPLHTA*SRASLGTDPAP
Trigger: TGGTGCAGGATCAGTTCCCAGTGACGCCCGTGAGCACGCTGTGTGCAGAGGCCAGGGAAACGGCGCGGCGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279281.8
ENST00000526856.5
ENST00000527646.5
ENST00000531146.1
ENST00000534591.1
CDS GCA 72 bp CCACCTGCCAGCTTGGTGATGCGCTCGTGGCGGTCCTaGAGCGTGGCGCTGATGCGAGCGCTGAAGTCGGTG +
Preference number: 6 (lower is better)
Translates to: PPASLVMRSWRS*SVALMRALKSV
Trigger: CACCGACTTCAGCGCTCGCATCAGCGCCACGCTGCAGGACCGCCACGAGCGCATCACCAAGCTGGCAGGTGG
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529180.1
CDS TCA 72 bp AGAGGCCGCCCACGAAGCCACTGCCTCCATGGTCGGTaGACTCTAACACGTCGGGAGCCGGAGGTGAGGGCC +
Preference number: 6 (lower is better)
Translates to: RGRPRSHCLHGR*TLTRREPEVRA
Trigger: GGCCCTCACCTCCGGCTCCCGACGTGTTAGAGTTCACCGACCATGGAGGCAGTGGCTTCGTGGGCGGCCTCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279281.8
ENST00000527646.5
ENST00000534557.1
CDS GCA 72 bp CACTTGGTGAGGCGCGAGGGCAGCTCAAAGAGGAACTaGAGCTTCCGCAGCAGCGCGTGGACCCCTGGGGGA +
Preference number: 6 (lower is better)
Translates to: HLVRREGSSKRN*SFRSSAWTPGG
Trigger: TCCCCCAGGGGTCCACGCGCTGCTGCGGAAGCTGCAGTTCCTCTTTGAGCTGCCCTCGCGCCTCACCAAGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529180.1
CDS CAA 90 bp GCTGCCAGAGAGGCCTTAATGTGGCTCAGGATGGAGCTGGCCACATaGGCCAGCAACTCGGCCAGGCCAGGGCCCTCCTTCCCAGCCACG +
Preference number: 6 (lower is better)
Translates to: AAREALMWLRMELAT*ASNSARPGPSFPAT
Trigger: CGTGGCTGGGAAGGAGGGCCCTGGCCTGGCCGAGTTGCTGGCCAATGTGGCCAGCTCCATCCTGAGCCACATTAAGGCCTCTCTGGCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279281.8
ENST00000527646.5
CDS GCA 72 bp CACTTGGTGAGGCGCGAGGGCAGCTCAAAGAGGAACTaGAGCTTCCGCAGCAGCGCGTGGACCCCTGTGGCT +
Preference number: 6 (lower is better)
Translates to: HLVRREGSSKRN*SFRSSAWTPVA
Trigger: AGCCACAGGGGTCCACGCGCTGCTGCGGAAGCTGCAGTTCCTCTTTGAGCTGCCCTCGCGCCTCACCAAGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530773.5
CDS CCA 72 bp CTCCATCAGACCACAAGCAGCCAAGGCAGGGACCGCTaGCTCCCAAGCGCATCTGCGTGTCCAGCGCACTGC +
Preference number: 6 (lower is better)
Translates to: LHQTTSSQGRDR*LPSASACPAHC
Trigger: GCAGTGCGCTGGACACGCAGATGCGCTTGGGAGCCAGCGGTCCCTGCCTTGGCTGCTTGTGGTCTGATGGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533656.1
ENST00000534124.5
CDS TCA 72 bp TCACAGACGCCCCAGCTTGCTCCAGGGGCGCATGGATaGTTCCAGAGAAAGGACTGCGAGGGCGTGGGTCAC +
Preference number: 6 (lower is better)
Translates to: SQTPQLAPGAHG*FQRKDCEGVGH
Trigger: GTGACCCACGCCCTCGCAGTCCTTTCTCTGGAATCATCCATGCGCCCCTGGAGCAAGCTGGGGCGTCTGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533656.1
CDS GCA 72 bp GGCACTCTCTACGCAGATCCCCTCAGACGCCTCAGCTaGTCGTACTCCCTGGCCGAGGTTCGTCCTCTTATG +
Preference number: 6 (lower is better)
Translates to: GTLYADPLRRLS*SYSLAEVRPLM
Trigger: CATAAGAGGACGAACCTCGGCCAGGGAGTACGAGCAGCTGAGGCGTCTGAGGGGATCTGCGTAGAGAGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526578.5
CDS GCA 72 bp CAGGTGCTTAGCCAGCTGCCACCACTGTGCCTCAACTaGTCCATCAGACCACAAGCAGCCAAGGCAGGGACC +
Preference number: 6 (lower is better)
Translates to: QVLSQLPPLCLN*SIRPQAAKAGT
Trigger: GGTCCCTGCCTTGGCTGCTTGTGGTCTGATGGAGCAGTTGAGGCACAGTGGTGGCAGCTGGCTAAGCACCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533656.1
ENST00000534124.5
CDS TCA 72 bp ACTCTCTACGCAGCGTGTTTGGTGTTTGTCAGCATTTaGAATCCTGGGGCTCGGCCTAAGCCCAGCCCCGCG +
Preference number: 6 (lower is better)
Translates to: TLYAACLVFVSI*NPGARPKPSPA
Trigger: CGCGGGGCTGGGCTTAGGCCGAGCCCCAGGATTTCAAATGCTGACAAACACCAAACACGCTGCGTAGAGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534557.1
CDS TCA 72 bp GGCCCGAGTCAGGGGAAACCACCAGCCCATCGGTGCTaGGGATGCCCTAAGTCAGCTACTCAAGCATCACAA +
Preference number: 6 (lower is better)
Translates to: GPSQGKPPAHRC*GCPKSATQASQ
Trigger: TTGTGATGCTTGAGTAGCTGACTTAGGGCATCCTCAGCACCGATGGGCTGGTGGTTTCCCCTGACTCGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534591.1
CDS GCA 72 bp GTAAGGCTGTTAATGACCCTCTGCTGGGGCTCTAAGTaGCCCAGCCCCCTCTGCAAGGGACAGCATCATCCT +
Preference number: 6 (lower is better)
Translates to: VRLLMTLCWGSK*PSPLCKGQHHP
Trigger: AGGATGATGCTGTCCCTTGCAGAGGGGGCTGGGGCACTTAGAGCCCCAGCAGAGGGTCATTAACAGCCTTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531146.1
CDS CCA 72 bp GTGAAAAGGTGCACTGCTGCCAGAGAGGCCTTAATGTaGCTCAGGATGGAGCTGGCCACATTGGCCAGCAAC +
Preference number: 6 (lower is better)
Translates to: VKRCTAAREALM*LRMELATLASN
Trigger: GTTGCTGGCCAATGTGGCCAGCTCCATCCTGAGCCACATTAAGGCCTCTCTGGCAGCAGTGCACCTTTTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279281.8
ENST00000527646.5
CDS CCA 72 bp AACCCTCCCCGGGATCCCTGGAAGTCTGAGTCACGTTaGAAGTCGGACCTTGTTGAACTCCACAGGGCTGAA +
Preference number: 6 (lower is better)
Translates to: NPPRDPWKSESR*KSDLVELHRAE
Trigger: TTCAGCCCTGTGGAGTTCAACAAGGTCCGACTTCCAACGTGACTCAGACTTCCAGGGATCCCGGGGAGGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526856.5
CDS CCA 72 bp GATGATGCCGGTCAGCACCGACACGATGGAAGTAGCTaGGATGAGGCAGAAAGTCTCCGGGGCCAGATAAGA +
Preference number: 6 (lower is better)
Translates to: DDAGQHRHDGSS*DEAESLRGQIR
Trigger: TCTTATCTGGCCCCGGAGACTTTCTGCCTCATCCCAGCTACTTCCATCGTGTCGGTGCTGACCGGCATCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530673.1
CDS CAA 72 bp AGCCGCACACACTCCAGCAGCGTCTTCAGGCTGATCTaGATGATGCCGGTCAGCACCGACACGATGGAAGTA +
Preference number: 6 (lower is better)
Translates to: SRTHSSSVFRLI*MMPVSTDTMEV
Trigger: TACTTCCATCGTGTCGGTGCTGACCGGCATCATCAAGATCAGCCTGAAGACGCTGCTGGAGTGTGTGCGGCT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530673.1
CDS CAA 72 bp GGGGAGGAGGCACTTCCGGGAGCCATAAAGTTGTTGTaGAAACGAGGCAGTCCTTCAGGTGAAACGTCCCCC +
Preference number: 6 (lower is better)
Translates to: GEEALPGAIKLL*KRGSPSGETSP
Trigger: GGGGGACGTTTCACCTGAAGGACTGCCTCGTTTCAACAACAACTTTATGGCTCCCGGAAGTGCCTCCTCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530773.5
CDS CAA 72 bp GGGGACGGGGAGGAGGCACTTCCGGGAGCCATAAAGTaGTTGTTGAAACGAGGCAGTCCTTCAGGTGAAACG +
Preference number: 6 (lower is better)
Translates to: GDGEEALPGAIK*LLKRGSPSGET
Trigger: CGTTTCACCTGAAGGACTGCCTCGTTTCAACAACAACTTTATGGCTCCCGGAAGTGCCTCCTCCCCGTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530773.5
CDS TCA 72 bp GCTGCTCGTACTCCCTGGCCGAGGTTCGTCCTCTTATaGACACCTGCTCTCCTGAACCTCACAAAAAGTCGG +
Preference number: 6 (lower is better)
Translates to: AARTPWPRFVLL*TPALLNLTKSR
Trigger: CCGACTTTTTGTGAGGTTCAGGAGAGCAGGTGTTCATAAGAGGACGAACCTCGGCCAGGGAGTACGAGCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526578.5
CDS GCA 72 bp GAAGGACACCTCTTTGGCGGTGAAAAGGTGCACTGCTaGCAGAGAGGCCTTAATGTGGCTCAGGATGGAGCT +
Preference number: 6 (lower is better)
Translates to: EGHLFGGEKVHC*QRGLNVAQDGA
Trigger: AGCTCCATCCTGAGCCACATTAAGGCCTCTCTGGCAGCAGTGCACCTTTTCACCGCCAAAGAGGTGTCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279281.8
ENST00000527646.5
CDS GCA 72 bp GGAGAAGGACACCTCTTTGGCGGTGAAAAGGTGCACTaGTGCCAGAGAGGCCTTAATGTGGCTCAGGATGGA +
Preference number: 6 (lower is better)
Translates to: GEGHLFGGEKVH*CQRGLNVAQDG
Trigger: TCCATCCTGAGCCACATTAAGGCCTCTCTGGCAGCAGTGCACCTTTTCACCGCCAAAGAGGTGTCCTTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279281.8
ENST00000527646.5
CDS CAA 72 bp GACGGGGAGGAGGCACTTCCGGGAGCCATAAAGTTGTaGTTGAAACGAGGCAGTCCTTCAGGTGAAACGTCC +
Preference number: 6 (lower is better)
Translates to: DGEEALPGAIKL*LKRGSPSGETS
Trigger: GGACGTTTCACCTGAAGGACTGCCTCGTTTCAACAACAACTTTATGGCTCCCGGAAGTGCCTCCTCCCCGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530773.5
CDS GCA 72 bp CCTTCCAGCTATGCAGCTGGGTCCTCATCTCTCATCTaGCTAAGACTTGCTGTAAATCTAGACCACGCCCCT +
Preference number: 6 (lower is better)
Translates to: PSSYAAGSSSLI*LRLAVNLDHAP
Trigger: AGGGGCGTGGTCTAGATTTACAGCAAGTCTTAGGCAGATGAGAGATGAGGACCCAGCTGCATAGCTGGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528588.5
CDS GCA 72 bp TGCAGCTGGGTCCTCATCTCTCATCTGCCTAAGACTTaGTGTAAATCTAGACCACGCCCCTCAACTTTTCTG +
Preference number: 6 (lower is better)
Translates to: CSWVLISHLPKT*CKSRPRPSTFL
Trigger: CAGAAAAGTTGAGGGGCGTGGTCTAGATTTACAGCAAGTCTTAGGCAGATGAGAGATGAGGACCCAGCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528588.5
CDS CAA 72 bp CCTGGAAGTCTGAGTCACGTTGGAAGTCGGACCTTGTaGAACTCCACAGGGCTGAACACATCAATACGTTCA +
Preference number: 6 (lower is better)
Translates to: PGSLSHVGSRTL*NSTGLNTSIRS
Trigger: TGAACGTATTGATGTGTTCAGCCCTGTGGAGTTCAACAAGGTCCGACTTCCAACGTGACTCAGACTTCCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526856.5