RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for VPS50 (Homo sapiens)

Ensembl gene IDs: ENSG00000004766

Ensembl transcript IDs: ENST00000251739.9, ENST00000305866.10, ENST00000436177.5, ENST00000438395.5, ENST00000441602.5, ENST00000458530.1, ENST00000458707.1, ENST00000467326.5, ENST00000471188.5, ENST00000477935.1, ENST00000480943.5, ENST00000485140.1, ENST00000485994.5, ENST00000495039.1, ENST00000544910.5, ENST00000649152.1

Found 696 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCAACCCATACAGCGTATCCCCAGATGTCAAAACCACTAGGTGACTaGGGTGTGGACTTGGCACCTTCTCCTTTCTTTCTTCTGCTGCTG +
Preference number: 1 (lower is better)
Translates to: PTHTAYPQMSKPLGD*GVDLAPSPFFLLLL
Trigger: CAGCAGCAGAAGAAAGAAAGGAGAAGGTGCCAAGTCCACACCTCAGTCACCTAGTGGTTTTGACATCTGGGGATACGCTGTATGGGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
3UTR TCA 90 bp TCTGCCAACCCATACAGCGTATCCCCAGATGTCAAAACCACTAGGTaGCTGAGGTGTGGACTTGGCACCTTCTCCTTTCTTTCTTCTGCT +
Preference number: 1 (lower is better)
Translates to: SANPYSVSPDVKTTR*LRCGLGTFSFLSSA
Trigger: AGCAGAAGAAAGAAAGGAGAAGGTGCCAAGTCCACACCTCAGTCACCTAGTGGTTTTGACATCTGGGGATACGCTGTATGGGTTGGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
3UTR TCA 90 bp CTGGCGGTTGAGACTGAGAATAGAACTGCTGAAGAAAGGGCTTTTTaGCTGCAGGCATCACAGCATCCAGATGTGGCTGAAGGAACTCAA +
Preference number: 1 (lower is better)
Translates to: LAVETENRTAEERAF*LQASQHPDVAEGTQ
Trigger: TTGAGTTCCTTCAGCCACATCTGGATGCTGTGATGCCTGCAGTCAAAAAGCCCTTTCTTCAGCAGTTCTATTCTCAGTCTCAACCGCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441602.5
3UTR TCA 90 bp AGAAAGGGCTTTTTGACTGCAGGCATCACAGCATCCAGATGTGGCTaGAGGAACTCAAACTGTTCAGCCAAGAATACCAAGGATTCCGTG +
Preference number: 1 (lower is better)
Translates to: RKGFLTAGITASRCG*RNSNCSAKNTKDSV
Trigger: CACGGAATCCTTGGTATTCTTGGCTGAACAGTTTGAGTTCCTTCAGCCACATCTGGATGCTGTGATGCCTGCAGTCAAAAAGCCCTTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
3UTR TCA 90 bp CGGTTGAGACTGTCTGAGAATAGAACTGCTGAAGAAAGGGCTTTTTaGCTGCAGGCATCACAGCATCCAGATGTGGCTGAAGGAACTCAA +
Preference number: 1 (lower is better)
Translates to: RLRLSENRTAEERAF*LQASQHPDVAEGTQ
Trigger: TTGAGTTCCTTCAGCCACATCTGGATGCTGTGATGCCTGCAGTCAAAAAGCCCTTTCTTCAGCAGTTCTATTCTCAGACAGTCTCAACCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649152.1
3UTR GCA 90 bp CGGTTGAGACTGAGAATAGAACTGCTGAAGAAAGGGCTTTTTGACTaGAGGCATCACAGCATCCAGATGTGGCTGAAGGAACTCAAACTG +
Preference number: 1 (lower is better)
Translates to: RLRLRIELLKKGLFD*RHHSIQMWLKELKL
Trigger: CAGTTTGAGTTCCTTCAGCCACATCTGGATGCTGTGATGCCTGCAGTCAAAAAGCCCTTTCTTCAGCAGTTCTATTCTCAGTCTCAACCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441602.5
3UTR TCA 90 bp TTTTCACAGGACCATCTCCTGTCTGCTCATCCACATAGTCTCGTTTaGGTTCCTCAGGAACATCACTGTCACTGTCATACTCTTGATAGG +
Preference number: 1 (lower is better)
Translates to: FSQDHLLSAHPHSLV*VPQEHHCHCHTLDR
Trigger: CCTATCAAGAGTATGACAGTGACAGTGATGTTCCTGAGGAACTCAAACGAGACTATGTGGATGAGCAGACAGGAGATGGTCCTGTGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
3UTR TCA 90 bp ATCCCTGGCTTCAGGGCAAAGTTTAGAGGAACAGCACATACTTACTaGAGACTAAGTGGATTCCAGAGTTCATCATTGGCTAGACTGATA +
Preference number: 1 (lower is better)
Translates to: IPGFRAKFRGTAHTY*RLSGFQSSSLARLI
Trigger: TATCAGTCTAGCCAATGATGAACTCTGGAATCCACTTAGTCTTCAGTAAGTATGTGCTGTTCCTCTAAACTTTGCCCTGAAGCCAGGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
3UTR TCA 90 bp AAAGTGCTTCACATTACACTGTGCATTTACAGACATCGCAGGGACTaGTGGACACAGAGTAGCAATTGTTTCCTTATCACCTCCATGCTT +
Preference number: 1 (lower is better)
Translates to: KVLHITLCIYRHRRD*WTQSSNCFLITSML
Trigger: AAGCATGGAGGTGATAAGGAAACAATTGCTACTCTGTGTCCATCAGTCCCTGCGATGTCTGTAAATGCACAGTGTAATGTGAAGCACTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
3UTR TCA 90 bp AAAAGGTGGATATTTAAGAAGAGTGAACATATGACCGTACATTTATaGGTGACTAGCAGACAACTGTTTCCTGAGTCAGTCAACCTGGGT +
Preference number: 1 (lower is better)
Translates to: KRWIFKKSEHMTVHL*VTSRQLFPESVNLG
Trigger: ACCCAGGTTGACTGACTCAGGAAACAGTTGTCTGCTAGTCACTCATAAATGTACGGTCATATGTTCACTCTTCTTAAATATCCACCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
3UTR GCA 90 bp GCAGCTTGCTGTTGTTTCAATTTGTCTCTATACGCCTCTAATTCTTaGAAATTGAGAACAGGTGGAAGCTTCTCCAGCTCATATTTAACA +
Preference number: 1 (lower is better)
Translates to: AACCCFNLSLYASNS*KLRTGGSFSSSYLT
Trigger: TGTTAAATATGAGCTGGAGAAGCTTCCACCTGTTCTCAATTTGCAAGAATTAGAGGCGTATAGAGACAAATTGAAACAACAGCAAGCTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436177.5
ENST00000438395.5
ENST00000649152.1
3UTR TCA 90 bp ATATTCAAGTGTCTTCTCCCATTTGTACAGATAACAGCAGCTAATTaGAGACCTGTCTGCAATGAGGTAACTCTTTCAAGTTCCTTTACA +
Preference number: 1 (lower is better)
Translates to: IFKCLLPFVQITAAN*RPVCNEVTLSSSFT
Trigger: TGTAAAGGAACTTGAAAGAGTTACCTCATTGCAGACAGGTCTTCAATTAGCTGCTGTTATCTGTACAAATGGGAGAAGACACTTGAATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436177.5
ENST00000441602.5
ENST00000649152.1
3UTR TCA 90 bp ATGGGTCTAATATCTGTTAGTTTTTCAAGTTTCATTAAAAACTGTTaGAAATCCAATTGCATCAGGGCACGACCCTCATTACTGCATTTC +
Preference number: 1 (lower is better)
Translates to: MGLISVSFSSFIKNC*KSNCIRARPSLLHF
Trigger: GAAATGCAGTAATGAGGGTCGTGCCCTGATGCAATTGGATTTTCAACAGTTTTTAATGAAACTTGAAAAACTAACAGATATTAGACCCAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
3UTR-3UTR GCA 90 bp GGAACTGCAGGAGTCAGAAACGGGGCTGAAAAACGATCAAGCTACAGGTTCACACAAACTGTAACAGTCTaGATTCCCCACCACCACCAT +
Preference number: 2 (lower is better)
Translates to: GTAGVRNGAEKRSSYRFTQTVTV*IPHHHH
Trigger: ATGGTGGTGGTGGGGAATGCAGACTGTTACAGTTTG...TGTGAACCTGTAGCTTGATCGTTTTTCAGCCCCGTTTCTGACTCCTGCAGTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000458707.1
3UTR-3UTR GCA 90 bp CATCACAGCATCCAGATGTGGCTGAAGGAACTCAAACTGTTCAGCCAAGAATACGGCTACCACTCTTTCTaGCAACCCATACAGCGTATC +
Preference number: 2 (lower is better)
Translates to: HHSIQMWLKELKLFSQEYGYHSF*QPIQRI
Trigger: GATACGCTGTATGGGTTGGCAGAAAGAGTGGTAGCC...GTATTCTTGGCTGAACAGTTTGAGTTCCTTCAGCCACATCTGGATGCTGTGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
3UTR-3UTR TCA 90 bp GCTTTCTTATTGATATGGGATCCCAGGCAAACATTCACCAGATTGGTCAGCTGCACTCCCTTCAGAAGCTaGAGCAGTATCCTCATTGTC +
Preference number: 2 (lower is better)
Translates to: AFLLIWDPRQTFTRLVSCTPFRS*SSILIV
Trigger: GACAATGAGGATACTGCTTCAGCTTCTGAAGGGAGT...GCAGCTGACCAATCTGGTGAATGTTTGCCTGGGATCCCATATCAATAAGAAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
3UTR-3UTR TCA 90 bp GCCAATCGTATACAATGTTCCCAAAGTATATTAGACACAGGCAAGGGTATGCGAGTCAAAACCACTAGGTaGCTGAGGTGTGGACTTGGC +
Preference number: 2 (lower is better)
Translates to: ANRIQCSQSILDTGKGMRVKTTR*LRCGLG
Trigger: GCCAAGTCCACACCTCAGTCACCTAGTGGTTTTGAC...TCGCATACCCTTGCCTGTGTCTAATATACTTTGGGAACATTGTATACGATTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
3UTR-3UTR TCA 90 bp AGAGTAGCAATTGTTTCCTTATCACCTCCATGCTTGATCACATGCCATTCTGTGGTCAAAACCACTAGGTaGCTGAGGTGTGGACTTGGC +
Preference number: 2 (lower is better)
Translates to: RVAIVSLSPPCLITCHSVVKTTR*LRCGLG
Trigger: GCCAAGTCCACACCTCAGTCACCTAGTGGTTTTGAC...CACAGAATGGCATGTGATCAAGCATGGAGGTGATAAGGAAACAATTGCTACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649152.1
3UTR-3UTR TCA 90 bp GCTTTCTTATTGATATGGGATCCCAGGCAAACATTCACCAGATTGGTCAGCTGCGCATCCAGATGTGGCTaGAGGAACTCAAACTGTTCA +
Preference number: 2 (lower is better)
Translates to: AFLLIWDPRQTFTRLVSCASRCG*RNSNCS
Trigger: TGAACAGTTTGAGTTCCTTCAGCCACATCTGGATGC...GCAGCTGACCAATCTGGTGAATGTTTGCCTGGGATCCCATATCAATAAGAAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
3UTR-3UTR GCA 90 bp TTTTATCACCTTAGGTCCCAGAAGACTCATAAGACCCAAGGCCTGTTTCTCACACTTCCCATAGTGCTTTaGACAGGTCTGCAAGGCATG +
Preference number: 2 (lower is better)
Translates to: FYHLRSQKTHKTQGLFLTLPIVL*TGLQGM
Trigger: CATGCCTTGCAGACCTGTGCAAAGCACTATGGGAAG...TGTGAGAAACAGGCCTTGGGTCTTATGAGTCTTCTGGGACCTAAGGTGATAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649152.1
3UTR-3UTR CCA 90 bp AGTAGCAATTGTTTCCTTATCACCTCCATGCTTGATCACATGCCATTCTGTGCCAGCTTGAGGGTCACTTaGCTGTTCTCGAAGTTCCCT +
Preference number: 2 (lower is better)
Translates to: SSNCFLITSMLDHMPFCASLRVT*LFSKFP
Trigger: AGGGAACTTCGAGAACAGCCAAGTGACCCTCAAGCT...GGCACAGAATGGCATGTGATCAAGCATGGAGGTGATAAGGAAACAATTGCTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649152.1
3UTR-3UTR TCA 90 bp TCCTTAGGATTCTGTGAGCTGTTGATGTTACAGGTCATGCATGGCAATCATTGGCAGACAACTGTTTCCTaGGTCAGTCAACCTGGGTTT +
Preference number: 2 (lower is better)
Translates to: SLGFCELLMLQVMHGNHWQTTVS*VSQPGF
Trigger: AAACCCAGGTTGACTGACTCAGGAAACAGTTGTCTG...CCAATGATTGCCATGCATGACCTGTAACATCAACAGCTCACAGAATCCTAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
3UTR-3UTR TCA 90 bp CTTTTGTATCAATTCCTATTACCTTGGAAAACACTGGGCTCTACCAGGCAGGTGCCACATAGTCTCGTTTaGGTTCCTCAGGAACATCAC +
Preference number: 2 (lower is better)
Translates to: LLYQFLLPWKTLGSTRQVPHSLV*VPQEHH
Trigger: GTGATGTTCCTGAGGAACTCAAACGAGACTATGTGG...CACCTGCCTGGTAGAGCCCAGTGTTTTCCAAGGTAATAGGAATTGATACAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649152.1
3UTR-3UTR TCA 90 bp TTGTCTCTATACGCCTCTAATTCTTGCAAATTGAGAACAGGTGGAAGCTTCTCCAGCTCTTGTTCAGCTTaGGGGTCACTTGGCTGTTCT +
Preference number: 2 (lower is better)
Translates to: LSLYASNSCKLRTGGSFSSSCSA*GSLGCS
Trigger: AGAACAGCCAAGTGACCCTCAAGCTGAACAAGAGCT...GGAGAAGCTTCCACCTGTTCTCAATTTGCAAGAATTAGAGGCGTATAGAGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436177.5
ENST00000438395.5
ENST00000649152.1
3UTR CAA 90 bp CTTGCTTTCTTATTGATATGGGATCCCAGGCAAACATTCACCAGATaGGTCAGCTGCTTCGTTGAATATTCCCTGTGCTCTTTGATCCAC +
Preference number: 2 (lower is better)
Translates to: LAFLLIWDPRQTFTR*VSCFVEYSLCSLIH
Trigger: GTGGATCAAAGAGCACAGGGAATATTCAACGAAGCAGCTGACCAATCTGGTGAATGTTTGCCTGGGATCCCATATCAATAAGAAAGCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
3UTR-3UTR TCA 90 bp CTTTTGTATCAATTCCTATTACCTTGGAAAACACTGGGCTCTACCAGGCAGGTGCTGCACTATAGTTCATaGCATCTGCATGCCACACAA +
Preference number: 2 (lower is better)
Translates to: LLYQFLLPWKTLGSTRQVLHYSS*HLHATQ
Trigger: TTGTGTGGCATGCAGATGTCATGAACTATAGTGCAG...CACCTGCCTGGTAGAGCCCAGTGTTTTCCAAGGTAATAGGAATTGATACAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
3UTR-3UTR TCA 90 bp CATCACAGCATCCAGATGTGGCTGAAGGAACTCAAACTGTTCAGCCAAGAATACAGGCCTAAACTAGCTTaGGTAAAACCTTCCTTTGCA +
Preference number: 2 (lower is better)
Translates to: HHSIQMWLKELKLFSQEYRPKLA*VKPSFA
Trigger: TGCAAAGGAAGGTTTTACTCAAGCTAGTTTAGGCCT...GTATTCTTGGCTGAACAGTTTGAGTTCCTTCAGCCACATCTGGATGCTGTGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
3UTR-3UTR TCA 90 bp GTCATGCTTTTCATGCCATTCCATAGTCCTATAATAGCTGAGCATAACTTCCCAAGCTCTTGTTCAGCTTaGGGGTCACTTGGCTGTTCT +
Preference number: 2 (lower is better)
Translates to: VMLFMPFHSPIIAEHNFPSSCSA*GSLGCS
Trigger: AGAACAGCCAAGTGACCCTCAAGCTGAACAAGAGCT...TGGGAAGTTATGCTCAGCTATTATAGGACTATGGAATGGCATGAAAAGCATGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649152.1
3UTR-3UTR GCA 90 bp CAGGGCACGACCCTCATTACTGCATTTCTTGACATTGGCATATCCTTCTACAATTGCTTTGCACAGGTCTaGAAGGCATGGAATATAGCT +
Preference number: 2 (lower is better)
Translates to: QGTTLITAFLDIGISFYNCFAQV*KAWNIA
Trigger: AGCTATATTCCATGCCTTGCAGACCTGTGCAAAGCA...ATTGTAGAAGGATATGCCAATGTCAAGAAATGCAGTAATGAGGGTCGTGCCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
3UTR-3UTR GCA 90 bp GCCAATCGTATACAATGTTCCCAAAGTATATTAGACACAGGCAAGGGTATGCGAAAAGGGCTTTTTGACTaGAGGCATCACAGCATCCAG +
Preference number: 2 (lower is better)
Translates to: ANRIQCSQSILDTGKGMRKGLFD*RHHSIQ
Trigger: CTGGATGCTGTGATGCCTGCAGTCAAAAAGCCCTTT...TCGCATACCCTTGCCTGTGTCTAATATACTTTGGGAACATTGTATACGATTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
3UTR-3UTR CCA 90 bp CTACAATCCAGTAAATTGGTTTCCGTAGTTCACTGGCGGTTGAGACTGAGAATAATACCAAGGATTCCGTaGCTACCACTCTTTCTGCCA +
Preference number: 2 (lower is better)
Translates to: LQSSKLVSVVHWRLRLRIIPRIP*LPLFLP
Trigger: TGGCAGAAAGAGTGGTAGCCACGGAATCCTTGGTAT...TATTCTCAGTCTCAACCGCCAGTGAACTACGGAAACCAATTTACTGGATTGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441602.5
3UTR-3UTR CCA 90 bp GGGGCTGAAAAACGATCAAGCTACAGGTTCACATATGGGACAAACTGTAACAGTAAAGAAATGATAAGCTaGGAGCGGTGGTTCATGCCT +
Preference number: 2 (lower is better)
Translates to: GAEKRSSYRFTYGTNCNSKEMIS*ERWFMP
Trigger: AGGCATGAACCACCGCTCCCAGCTTATCATTTCTTT...ACTGTTACAGTTTGTCCCATATGTGAACCTGTAGCTTGATCGTTTTTCAGCCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458707.1
3UTR CAA 90 bp GCATCTGTTCATAATCAAGGGCTTTACCAGCTACAATCCAGTAAATaGGTTTCCGTAGTTCACTGGCGGTTGAGACTGAGAATAGAACTG +
Preference number: 2 (lower is better)
Translates to: ASVHNQGLYQLQSSK*VSVVHWRLRLRIEL
Trigger: CAGTTCTATTCTCAGTCTCAACCGCCAGTGAACTACGGAAACCAATTTACTGGATTGTAGCTGGTAAAGCCCTTGATTATGAACAGATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441602.5
3UTR CAA 90 bp GCATCTGTTCATAATCAAGGGCTTTACCAGCTACAATCCAGTAAATaGGTTTCCGTAGTTCACTGGCGGTTGAGACTGTCTGAGAATAGA +
Preference number: 2 (lower is better)
Translates to: ASVHNQGLYQLQSSK*VSVVHWRLRLSENR
Trigger: TCTATTCTCAGACAGTCTCAACCGCCAGTGAACTACGGAAACCAATTTACTGGATTGTAGCTGGTAAAGCCCTTGATTATGAACAGATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649152.1
3UTR-3UTR TCA 90 bp CTTGATCACATGCCATTCTGTGCCATCCATTTTATCACCTTAGGTCCCAGAAGAATGCTACTCAGGCATTaGAAAGGTACCCTCAATGAA +
Preference number: 2 (lower is better)
Translates to: LDHMPFCAIHFITLGPRRMLLRH*KGTLNE
Trigger: TTCATTGAGGGTACCTTTTCAATGCCTGAGTAGCAT...TCTTCTGGGACCTAAGGTGATAAAATGGATGGCACAGAATGGCATGTGATCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
3UTR-3UTR TCA 90 bp CAGGGCACGACCCTCATTACTGCATTTCTTGACATTGGCATATCCTTCTACAATATGCTACTCAGGCATTaGAAAGGTACCCTCAATGAA +
Preference number: 2 (lower is better)
Translates to: QGTTLITAFLDIGISFYNMLLRH*KGTLNE
Trigger: TTCATTGAGGGTACCTTTTCAATGCCTGAGTAGCAT...ATTGTAGAAGGATATGCCAATGTCAAGAAATGCAGTAATGAGGGTCGTGCCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649152.1
3UTR-3UTR TCA 90 bp CTTGATCACATGCCATTCTGTGCCATCCATTTTATCACCTTAGGTCCCAGAAGACCGTACATTTATGAGTaGCTAGCAGACAACTGTTTC +
Preference number: 2 (lower is better)
Translates to: LDHMPFCAIHFITLGPRRPYIYE*LADNCF
Trigger: GAAACAGTTGTCTGCTAGTCACTCATAAATGTACGG...TCTTCTGGGACCTAAGGTGATAAAATGGATGGCACAGAATGGCATGTGATCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
3UTR-3UTR TCA 90 bp TTTTATCACCTTAGGTCCCAGAAGACTCATAAGACCCAAGGCCTGTTTCTCACAACAGCACATACTTACTaGAGACTAAGTGGATTCCAG +
Preference number: 2 (lower is better)
Translates to: FYHLRSQKTHKTQGLFLTTAHTY*RLSGFQ
Trigger: CTGGAATCCACTTAGTCTTCAGTAAGTATGTGCTGT...TGTGAGAAACAGGCCTTGGGTCTTATGAGTCTTCTGGGACCTAAGGTGATAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
3UTR-3UTR TCA 90 bp AGCAATTGTTTCCTTATCACCTCCATGCTTGATCACATGCCATTCTGTGCCATCACAGCACATACTTACTaGAGACTAAGTGGATTCCAG +
Preference number: 2 (lower is better)
Translates to: SNCFLITSMLDHMPFCAITAHTY*RLSGFQ
Trigger: CTGGAATCCACTTAGTCTTCAGTAAGTATGTGCTGT...GATGGCACAGAATGGCATGTGATCAAGCATGGAGGTGATAAGGAAACAATTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
3UTR-3UTR TCA 90 bp CATATTCTGAAAGTGCTTCACATTACACTGTGCATTTACAGACATCGCAGGGACGATTCTGTGAGCTGTTaGTGTTACAGGTCATGCATG +
Preference number: 2 (lower is better)
Translates to: HILKVLHITLCIYRHRRDDSVSC*CYRSCM
Trigger: CATGCATGACCTGTAACATCAACAGCTCACAGAATC...GTCCCTGCGATGTCTGTAAATGCACAGTGTAATGTGAAGCACTTTCAGAATATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
3UTR-3UTR TCA 90 bp ATTCACCCTCACATTATGCTTATTAAGAACCAAGCTCAGAGGGTAGAAAAGTGCTATCACCTCCATGCTTaGTCACATGCCATTCTGTGC +
Preference number: 2 (lower is better)
Translates to: IHPHIMLIKNQAQRVEKCYHLHA*SHAILC
Trigger: GCACAGAATGGCATGTGATCAAGCATGGAGGTGATA...GCACTTTTCTACCCTCTGAGCTTGGTTCTTAATAAGCATAATGTGAGGGTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
3UTR-3UTR TCA 90 bp ATTCACCCTCACATTATGCTTATTAAGAACCAAGCTCAGAGGGTAGAAAAGTGCATTCCCTGTGCTCTTTaGTCCACCGTTCCATGTCAT +
Preference number: 2 (lower is better)
Translates to: IHPHIMLIKNQAQRVEKCIPCAL*STVPCH
Trigger: ATGACATGGAACGGTGGATCAAAGAGCACAGGGAAT...GCACTTTTCTACCCTCTGAGCTTGGTTCTTAATAAGCATAATGTGAGGGTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
3UTR-3UTR GCA 90 bp TTTTATCACCTTAGGTCCCAGAAGACTCATAAGACCCAAGGCCTGTTTCTCACACAATCATTGGACCAATaGCACACAAGCTTAGATGTC +
Preference number: 2 (lower is better)
Translates to: FYHLRSQKTHKTQGLFLTQSLDQ*HTSLDV
Trigger: GACATCTAAGCTTGTGTGGCATTGGTCCAATGATTG...TGTGAGAAACAGGCCTTGGGTCTTATGAGTCTTCTGGGACCTAAGGTGATAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
3UTR-3UTR GCA 90 bp CACATAGTCTCGTTTGAGTTCCTCAGGAACATCACTGTCACTGTCATACTCTTGCAATCATTGGACCAATaGCACACAAGCTTAGATGTC +
Preference number: 2 (lower is better)
Translates to: HIVSFEFLRNITVTVILLQSLDQ*HTSLDV
Trigger: GACATCTAAGCTTGTGTGGCATTGGTCCAATGATTG...CAAGAGTATGACAGTGACAGTGATGTTCCTGAGGAACTCAAACGAGACTATGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649152.1
3UTR-3UTR GCA 90 bp CCCGAGAAACACTTTTCACAGGACCATCTCCTGTCTGCTCATCCACATAGTCTCTGTTCCAAAGTATCTTaGAGCTTTGAATTCAGTTCA +
Preference number: 2 (lower is better)
Translates to: PEKHFSQDHLLSAHPHSLCSKVS*SFEFSS
Trigger: TGAACTGAATTCAAAGCTGCAAGATACTTTGGAACA...GAGACTATGTGGATGAGCAGACAGGAGATGGTCCTGTGAAAAGTGTTTCTCGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
3UTR-3UTR GCA 90 bp CTCTCCAGTCAGAAAGAACACACACAAAATTCCTTATCAGACAGTTGGCAAGAGTGCTTTGCACAGGTCTaGAAGGCATGGAATATAGCT +
Preference number: 2 (lower is better)
Translates to: LSSQKEHTQNSLSDSWQECFAQV*KAWNIA
Trigger: AGCTATATTCCATGCCTTGCAGACCTGTGCAAAGCA...CTCTTGCCAACTGTCTGATAAGGAATTTTGTGTGTGTTCTTTCTGACTGGAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649152.1
3UTR-3UTR GCA 90 bp AGAGTAGCAATTGTTTCCTTATCACCTCCATGCTTGATCACATGCCATTCTGTGACCAGATTGGTCAGCTaGTTCGTTGAATATTCCCTG +
Preference number: 2 (lower is better)
Translates to: RVAIVSLSPPCLITCHSVTRLVS*FVEYSL
Trigger: CAGGGAATATTCAACGAAGCAGCTGACCAATCTGGT...CACAGAATGGCATGTGATCAAGCATGGAGGTGATAAGGAAACAATTGCTACTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649152.1
3UTR-3UTR CCA 90 bp TTGGACCAATGCCACACAAGCTTAGATGTCCTCCACTCTCCAGTCAGAAAGAACTCCTTATCAGACAGTTaGCAAGAGTACATGGAAAAT +
Preference number: 2 (lower is better)
Translates to: LDQCHTSLDVLHSPVRKNSLSDS*QEYMEN
Trigger: ATTTTCCATGTACTCTTGCCAACTGTCTGATAAGGA...GTTCTTTCTGACTGGAGAGTGGAGGACATCTAAGCTTGTGTGGCATTGGTCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
3UTR-3UTR CCA 90 bp CATATTCTGAAAGTGCTTCACATTACACTGTGCATTTACAGACATCGCAGGGACATGCATGGCAATCATTaGACCAATGCCACACAAGCT +
Preference number: 2 (lower is better)
Translates to: HILKVLHITLCIYRHRRDMHGNH*TNATQA
Trigger: AGCTTGTGTGGCATTGGTCCAATGATTGCCATGCAT...GTCCCTGCGATGTCTGTAAATGCACAGTGTAATGTGAAGCACTTTCAGAATATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
3UTR-3UTR CCA 90 bp CATATTCTGAAAGTGCTTCACATTACACTGTGCATTTACAGACATCGCAGGGACGTTACAGGTCATGCATaGCAATCATTGGACCAATGC +
Preference number: 2 (lower is better)
Translates to: HILKVLHITLCIYRHRRDVTGHA*QSLDQC
Trigger: GCATTGGTCCAATGATTGCCATGCATGACCTGTAAC...GTCCCTGCGATGTCTGTAAATGCACAGTGTAATGTGAAGCACTTTCAGAATATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
3UTR-3UTR CCA 90 bp CTACAGTACTGCTCAAACAAGGTCACTGTTTTTGAAGAAGTTGAGACTGGCTGTGTTACAGGTCATGCATaGCAATCATTGGACCAATGC +
Preference number: 2 (lower is better)
Translates to: LQYCSNKVTVFEEVETGCVTGHA*QSLDQC
Trigger: GCATTGGTCCAATGATTGCCATGCATGACCTGTAAC...ACAGCCAGTCTCAACTTCTTCAAAAACAGTGACCTTGTTTGAGCAGTACTGTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649152.1
3UTR-3UTR CCA 90 bp AATGGCTTGGGTGAAGTGCATATGAAGTTGATCCATTGCTGTCTGTGTTTTTCCCAACTGAATAGCTCCTaGATAATCTTCCTCCTCCAG +
Preference number: 2 (lower is better)
Translates to: NGLGEVHMKLIHCCLCFSQLNSS*IIFLLQ
Trigger: CTGGAGGAGGAAGATTATCCAGGAGCTATTCAGTTG...GGAAAAACACAGACAGCAATGGATCAACTTCATATGCACTTCACCCAAGCCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
3UTR-3UTR CCA 90 bp CTACAGTACTGCTCAAACAAGGTCACTGTTTTTGAAGAAGTTGAGACTGGCTGTCAACTGAATAGCTCCTaGATAATCTTCCTCCTCCAG +
Preference number: 2 (lower is better)
Translates to: LQYCSNKVTVFEEVETGCQLNSS*IIFLLQ
Trigger: CTGGAGGAGGAAGATTATCCAGGAGCTATTCAGTTG...ACAGCCAGTCTCAACTTCTTCAAAAACAGTGACCTTGTTTGAGCAGTACTGTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
3UTR-3UTR CCA 90 bp GTTCACTGGCGGTTGAGACTGAGAATAGAACTGCTGAAGAAAGGGCTTTTTGACAATTCTTGCAGATTTTaGAAAGAGCTACGTCCAGCT +
Preference number: 2 (lower is better)
Translates to: VHWRLRLRIELLKKGLFDNSCRF*KELRPA
Trigger: AGCTGGACGTAGCTCTTTCCAAAATCTGCAAGAATT...GTCAAAAAGCCCTTTCTTCAGCAGTTCTATTCTCAGTCTCAACCGCCAGTGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441602.5
3UTR-3UTR TCA 90 bp CTTTTGTATCAATTCCTATTACCTTGGAAAACACTGGGCTCTACCAGGCAGGTGTCAGGTCATATATGTTaGGTGAGGATCAATGCCATT +
Preference number: 2 (lower is better)
Translates to: LLYQFLLPWKTLGSTRQVSGHIC*VRINAI
Trigger: AATGGCATTGATCCTCACTCAACATATATGACCTGA...CACCTGCCTGGTAGAGCCCAGTGTTTTCCAAGGTAATAGGAATTGATACAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
3UTR-3UTR TCA 90 bp CAAACATATTCTGAAAGTGCTTCACATTACACTGTGCATTTACAGACATCGCAGTATCACCTCCATGCTTaGTCACATGCCATTCTGTGC +
Preference number: 2 (lower is better)
Translates to: QTYSESASHYTVHLQTSQYHLHA*SHAILC
Trigger: GCACAGAATGGCATGTGATCAAGCATGGAGGTGATA...CTGCGATGTCTGTAAATGCACAGTGTAATGTGAAGCACTTTCAGAATATGTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
3UTR-3UTR TCA 90 bp ATTCACCCTCACATTATGCTTATTAAGAACCAAGCTCAGAGGGTAGAAAAGTGCGCTCTACCAGGCAGGTaGTTCCTGTTCATATTATCT +
Preference number: 2 (lower is better)
Translates to: IHPHIMLIKNQAQRVEKCALPGR*FLFILS
Trigger: AGATAATATGAACAGGAATCACCTGCCTGGTAGAGC...GCACTTTTCTACCCTCTGAGCTTGGTTCTTAATAAGCATAATGTGAGGGTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
3UTR-3UTR TCA 90 bp TGCAGATTTTGGAAAGAGCTACGTCCAGCTGTTCCTCAATCTGTTCCAAAGTATAAGACCTGTCTGCAATaGGGTAACTCTTTCAAGTTC +
Preference number: 2 (lower is better)
Translates to: CRFWKELRPAVPQSVPKYKTCLQ*GNSFKF
Trigger: GAACTTGAAAGAGTTACCTCATTGCAGACAGGTCTT...ATACTTTGGAACAGATTGAGGAACAGCTGGACGTAGCTCTTTCCAAAATCTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
3UTR-3UTR TCA 90 bp CTACAGTACTGCTCAAACAAGGTCACTGTTTTTGAAGAAGTTGAGACTGGCTGTAGGCCTAAACTAGCTTaGGTAAAACCTTCCTTTGCA +
Preference number: 2 (lower is better)
Translates to: LQYCSNKVTVFEEVETGCRPKLA*VKPSFA
Trigger: TGCAAAGGAAGGTTTTACTCAAGCTAGTTTAGGCCT...ACAGCCAGTCTCAACTTCTTCAAAAACAGTGACCTTGTTTGAGCAGTACTGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
3UTR-3UTR TCA 90 bp CTACAGTACTGCTCAAACAAGGTCACTGTTTTTGAAGAAGTTGAGACTGGCTGTTGTGAATGGCTTGGGTaGAGTGCATATGAAGTTGAT +
Preference number: 2 (lower is better)
Translates to: LQYCSNKVTVFEEVETGCCEWLG*SAYEVD
Trigger: ATCAACTTCATATGCACTTCACCCAAGCCATTCACA...ACAGCCAGTCTCAACTTCTTCAAAAACAGTGACCTTGTTTGAGCAGTACTGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
3UTR-3UTR TCA 90 bp GCCAATCGTATACAATGTTCCCAAAGTATATTAGACACAGGCAAGGGTATGCGATGTGAATGGCTTGGGTaGAGTGCATATGAAGTTGAT +
Preference number: 2 (lower is better)
Translates to: ANRIQCSQSILDTGKGMRCEWLG*SAYEVD
Trigger: ATCAACTTCATATGCACTTCACCCAAGCCATTCACA...TCGCATACCCTTGCCTGTGTCTAATATACTTTGGGAACATTGTATACGATTGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
3UTR-3UTR TCA 90 bp TCTAATTCTTGCAAATTGAGAACAGGTGGAAGCTTCTCCAGCTCATATTTAACAAGCTCTTGTTCAGCTTaGGGGTCACTTGGCTGTTCT +
Preference number: 2 (lower is better)
Translates to: SNSCKLRTGGSFSSSYLTSSCSA*GSLGCS
Trigger: AGAACAGCCAAGTGACCCTCAAGCTGAACAAGAGCT...TGTTAAATATGAGCTGGAGAAGCTTCCACCTGTTCTCAATTTGCAAGAATTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436177.5
ENST00000438395.5
ENST00000649152.1
3UTR-3UTR GCA 90 bp TTGGACCAATGCCACACAAGCTTAGATGTCCTCCACTCTCCAGTCAGAAAGAACGTAAAACTTCAGACTTaGTACCACAAAATTCTTCTC +
Preference number: 2 (lower is better)
Translates to: LDQCHTSLDVLHSPVRKNVKLQT*YHKILL
Trigger: GAGAAGAATTTTGTGGTAGCAAGTCTGAAGTTTTAC...GTTCTTTCTGACTGGAGAGTGGAGGACATCTAAGCTTGTGTGGCATTGGTCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649152.1
3UTR-3UTR CCA 90 bp AGAACAGGTGGAAGCTTCTCCAGCTCATATTTAACAATATCAAATGAATCCACAAGCTTGAGGGTCACTTaGCTGTTCTCGAAGTTCCCT +
Preference number: 2 (lower is better)
Translates to: RTGGSFSSSYLTISNESTSLRVT*LFSKFP
Trigger: AGGGAACTTCGAGAACAGCCAAGTGACCCTCAAGCT...TGTGGATTCATTTGATATTGTTAAATATGAGCTGGAGAAGCTTCCACCTGTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436177.5
ENST00000438395.5
ENST00000649152.1
3UTR CAA 90 bp TTCCACATAACCAAGAACAACTTGAAACACGGTGTTGTGAATGGCTaGGGTGAAGTGCATATGAAGTTGATCCATTGCTGTCTGTGTTTT +
Preference number: 2 (lower is better)
Translates to: FHITKNNLKHGVVNG*GEVHMKLIHCCLCF
Trigger: AAAACACAGACAGCAATGGATCAACTTCATATGCACTTCACCCAAGCCATTCACAACACCGTGTTTCAAGTTGTTCTTGGTTATGTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
3UTR-3UTR TCA 90 bp CCATTTCACATTAGCCATGAGAAGCAGCATCTGTTCATAATCAAGGGCTTTACCTCAGGTCATATATGTTaGGTGAGGATCAATGCCATT +
Preference number: 2 (lower is better)
Translates to: PFHISHEKQHLFIIKGFTSGHIC*VRINAI
Trigger: AATGGCATTGATCCTCACTCAACATATATGACCTGA...GGTAAAGCCCTTGATTATGAACAGATGCTGCTTCTCATGGCTAATGTGAAATGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
3UTR-3UTR TCA 90 bp AAGAACACACACAAAATTCCTTATCAGACAGTTGGCAAGAGTACATGGAAAATGCAGACAACTGTTTCCTaGGTCAGTCAACCTGGGTTT +
Preference number: 2 (lower is better)
Translates to: KNTHKIPYQTVGKSTWKMQTTVS*VSQPGF
Trigger: AAACCCAGGTTGACTGACTCAGGAAACAGTTGTCTG...CATTTTCCATGTACTCTTGCCAACTGTCTGATAAGGAATTTTGTGTGTGTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
3UTR-3UTR TCA 90 bp CAAACATATTCTGAAAGTGCTTCACATTACACTGTGCATTTACAGACATCGCAGGATTCTGTGAGCTGTTaGTGTTACAGGTCATGCATG +
Preference number: 2 (lower is better)
Translates to: QTYSESASHYTVHLQTSQDSVSC*CYRSCM
Trigger: CATGCATGACCTGTAACATCAACAGCTCACAGAATC...CTGCGATGTCTGTAAATGCACAGTGTAATGTGAAGCACTTTCAGAATATGTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
3UTR-3UTR TCA 90 bp AGAGTAGCAATTGTTTCCTTATCACCTCCATGCTTGATCACATGCCATTCTGTGCTGGTAACTCTCTTGTaGTTAGGTAACTTCATGACT +
Preference number: 2 (lower is better)
Translates to: RVAIVSLSPPCLITCHSVLVTLL*LGNFMT
Trigger: AGTCATGAAGTTACCTAATCACAAGAGAGTTACCAG...CACAGAATGGCATGTGATCAAGCATGGAGGTGATAAGGAAACAATTGCTACTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
3UTR-3UTR TCA 90 bp CAGAGATTTCAGAAGTCCAATCAGCAACTGACGTTTCCTTTGATTTGCAAGAAGAAGACCTGTCTGCAATaGGGTAACTCTTTCAAGTTC +
Preference number: 2 (lower is better)
Translates to: QRFQKSNQQLTFPLICKKKTCLQ*GNSFKF
Trigger: GAACTTGAAAGAGTTACCTCATTGCAGACAGGTCTT...CTTCTTGCAAATCAAAGGAAACGTCAGTTGCTGATTGGACTTCTGAAATCTCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
3UTR-3UTR TCA 90 bp CAGGGCACGACCCTCATTACTGCATTTCTTGACATTGGCATATCCTTCTACAATCAAGATGCTGAAATTTaGCTTAACAGGACAAAGTTC +
Preference number: 2 (lower is better)
Translates to: QGTTLITAFLDIGISFYNQDAEI*LNRTKF
Trigger: GAACTTTGTCCTGTTAAGTCAAATTTCAGCATCTTG...ATTGTAGAAGGATATGCCAATGTCAAGAAATGCAGTAATGAGGGTCGTGCCCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
3UTR-3UTR TCA 90 bp ATGTATAACTGTAGTCACATAACCATTGTTATGACAAGGCGGCAACATCATTTCGGTCAGCTGCTTCGTTaGATATTCCCTGTGCTCTTT +
Preference number: 2 (lower is better)
Translates to: MYNCSHITIVMTRRQHHFGQLLR*IFPVLF
Trigger: AAAGAGCACAGGGAATATTCAACGAAGCAGCTGACC...GAAATGATGTTGCCGCCTTGTCATAACAATGGTTATGTGACTACAGTTATACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
3UTR-3UTR GCA 90 bp AGTAGCAATTGTTTCCTTATCACCTCCATGCTTGATCACATGCCATTCTGTGCCGAACACACTAAAAGCTaGACTATAGTTCATGACATC +
Preference number: 2 (lower is better)
Translates to: SSNCFLITSMLDHMPFCAEHTKS*TIVHDI
Trigger: GATGTCATGAACTATAGTGCAGCTTTTAGTGTGTTC...GGCACAGAATGGCATGTGATCAAGCATGGAGGTGATAAGGAAACAATTGCTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
3UTR-3UTR GCA 90 bp ATTCACCCTCACATTATGCTTATTAAGAACCAAGCTCAGAGGGTAGAAAAGTGCCAATCATTGGACCAATaGCACACAAGCTTAGATGTC +
Preference number: 2 (lower is better)
Translates to: IHPHIMLIKNQAQRVEKCQSLDQ*HTSLDV
Trigger: GACATCTAAGCTTGTGTGGCATTGGTCCAATGATTG...GCACTTTTCTACCCTCTGAGCTTGGTTCTTAATAAGCATAATGTGAGGGTGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
3UTR-3UTR GCA 90 bp CAAACATATTCTGAAAGTGCTTCACATTACACTGTGCATTTACAGACATCGCAGCCATGCTTGATCACATaGCATTCTGTGCCATCCATT +
Preference number: 2 (lower is better)
Translates to: QTYSESASHYTVHLQTSQPCLIT*HSVPSI
Trigger: AATGGATGGCACAGAATGGCATGTGATCAAGCATGG...CTGCGATGTCTGTAAATGCACAGTGTAATGTGAAGCACTTTCAGAATATGTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
3UTR-3UTR GCA 90 bp CCATTTCACATTAGCCATGAGAAGCAGCATCTGTTCATAATCAAGGGCTTTACCTACGCCTCTAATTCTTaGAAATTGAGAACAGGTGGA +
Preference number: 2 (lower is better)
Translates to: PFHISHEKQHLFIIKGFTYASNS*KLRTGG
Trigger: TCCACCTGTTCTCAATTTGCAAGAATTAGAGGCGTA...GGTAAAGCCCTTGATTATGAACAGATGCTGCTTCTCATGGCTAATGTGAAATGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
3UTR-3UTR GCA 90 bp CATCACAGCATCCAGATGTGGCTGAAGGAACTCAAACTGTTCAGCCAAGAATACTGTTCCAAAGTATCTTaGAGCTTTGAATTCAGTTCA +
Preference number: 2 (lower is better)
Translates to: HHSIQMWLKELKLFSQEYCSKVS*SFEFSS
Trigger: TGAACTGAATTCAAAGCTGCAAGATACTTTGGAACA...GTATTCTTGGCTGAACAGTTTGAGTTCCTTCAGCCACATCTGGATGCTGTGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
3UTR-3UTR GCA 90 bp GTTCACTGGCGGTTGAGACTGAGAATAGAACTGCTGAAGAAAGGGCTTTTTGACAATTCTTCTCCAACTTaGATCAACCTGCTGATTATA +
Preference number: 2 (lower is better)
Translates to: VHWRLRLRIELLKKGLFDNSSPT*INLLII
Trigger: TATAATCAGCAGGTTGATGCAAGTTGGAGAAGAATT...GTCAAAAAGCCCTTTCTTCAGCAGTTCTATTCTCAGTCTCAACCGCCAGTGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441602.5
3UTR-3UTR GCA 90 bp TTTAGAGTTGTTCTTAGTCTACTACTACTAAGGCCGAGTCCAGTTGATTCCAATCCACCACTACAGTACTaGTCAAACAAGGTCACTGTT +
Preference number: 2 (lower is better)
Translates to: FRVVLSLLLLRPSPVDSNPPLQY*SNKVTV
Trigger: AACAGTGACCTTGTTTGAGCAGTACTGTAGTGGTGG...ATTGGAATCAACTGGACTCGGCCTTAGTAGTAGTAGACTAAGAACAACTCTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
3UTR-3UTR CCA 90 bp CAAACATATTCTGAAAGTGCTTCACATTACACTGTGCATTTACAGACATCGCAGATGCATGGCAATCATTaGACCAATGCCACACAAGCT +
Preference number: 2 (lower is better)
Translates to: QTYSESASHYTVHLQTSQMHGNH*TNATQA
Trigger: AGCTTGTGTGGCATTGGTCCAATGATTGCCATGCAT...CTGCGATGTCTGTAAATGCACAGTGTAATGTGAAGCACTTTCAGAATATGTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
3UTR-3UTR CCA 90 bp ACAAATCAGTTCCAAGCAAGTAGGTTTTTACTTTTAGCTGAACATCCTGCCATACAGGTCTGCAAGGCATaGAATATAGCTGTCTGGTGT +
Preference number: 2 (lower is better)
Translates to: TNQFQASRFLLLAEHPAIQVCKA*NIAVWC
Trigger: ACACCAGACAGCTATATTCCATGCCTTGCAGACCTG...TATGGCAGGATGTTCAGCTAAAAGTAAAAACCTACTTGCTTGGAACTGATTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
3UTR-3UTR CCA 90 bp AATTCTTGCAAATTGAGAACAGGTGGAAGCTTCTCCAGCTCATATTTAACAATAAGCTTGAGGGTCACTTaGCTGTTCTCGAAGTTCCCT +
Preference number: 2 (lower is better)
Translates to: NSCKLRTGGSFSSSYLTISLRVT*LFSKFP
Trigger: AGGGAACTTCGAGAACAGCCAAGTGACCCTCAAGCT...TATTGTTAAATATGAGCTGGAGAAGCTTCCACCTGTTCTCAATTTGCAAGAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436177.5
ENST00000438395.5
ENST00000649152.1
3UTR-3UTR TCA 90 bp CAAACATATTCTGAAAGTGCTTCACATTACACTGTGCATTTACAGACATCGCAGATGCTACTCAGGCATTaGAAAGGTACCCTCAATGAA +
Preference number: 2 (lower is better)
Translates to: QTYSESASHYTVHLQTSQMLLRH*KGTLNE
Trigger: TTCATTGAGGGTACCTTTTCAATGCCTGAGTAGCAT...CTGCGATGTCTGTAAATGCACAGTGTAATGTGAAGCACTTTCAGAATATGTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
3UTR-3UTR TCA 90 bp CAAACATATTCTGAAAGTGCTTCACATTACACTGTGCATTTACAGACATCGCAGCCGTACATTTATGAGTaGCTAGCAGACAACTGTTTC +
Preference number: 2 (lower is better)
Translates to: QTYSESASHYTVHLQTSQPYIYE*LADNCF
Trigger: GAAACAGTTGTCTGCTAGTCACTCATAAATGTACGG...CTGCGATGTCTGTAAATGCACAGTGTAATGTGAAGCACTTTCAGAATATGTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
3UTR-3UTR TCA 90 bp CATATTCTGAAAGTGCTTCACATTACACTGTGCATTTACAGACATCGCAGGGACGTTTTTACTTTTAGCTaGACATCCTGCCATATTCGT +
Preference number: 2 (lower is better)
Translates to: HILKVLHITLCIYRHRRDVFTFS*TSCHIR
Trigger: ACGAATATGGCAGGATGTTCAGCTAAAAGTAAAAAC...GTCCCTGCGATGTCTGTAAATGCACAGTGTAATGTGAAGCACTTTCAGAATATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649152.1
3UTR-3UTR TCA 90 bp CTACAGTACTGCTCAAACAAGGTCACTGTTTTTGAAGAAGTTGAGACTGGCTGTCTTGCATCAACCTGCTaGTTATATCCAAAACAAAGA +
Preference number: 2 (lower is better)
Translates to: LQYCSNKVTVFEEVETGCLASTC*LYPKQR
Trigger: TCTTTGTTTTGGATATAATCAGCAGGTTGATGCAAG...ACAGCCAGTCTCAACTTCTTCAAAAACAGTGACCTTGTTTGAGCAGTACTGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
3UTR-3UTR TCA 90 bp CATATTCTGAAAGTGCTTCACATTACACTGTGCATTTACAGACATCGCAGGGACCAAGATGCTGAAATTTaGCTTAACAGGACAAAGTTC +
Preference number: 2 (lower is better)
Translates to: HILKVLHITLCIYRHRRDQDAEI*LNRTKF
Trigger: GAACTTTGTCCTGTTAAGTCAAATTTCAGCATCTTG...GTCCCTGCGATGTCTGTAAATGCACAGTGTAATGTGAAGCACTTTCAGAATATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649152.1
3UTR-3UTR TCA 90 bp ATTATGCTTATTAAGAACCAAGCTCAGAGGGTAGAAAAGTGCCAACTTCATTTTCCACATAGTCTCGTTTaGGTTCCTCAGGAACATCAC +
Preference number: 2 (lower is better)
Translates to: IMLIKNQAQRVEKCQLHFPHSLV*VPQEHH
Trigger: GTGATGTTCCTGAGGAACTCAAACGAGACTATGTGG...AAAATGAAGTTGGCACTTTTCTACCCTCTGAGCTTGGTTCTTAATAAGCATAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
3UTR-3UTR GCA 90 bp CTACAATCCAGTAAATTGGTTTCCGTAGTTCACTGGCGGTTGAGACTGAGAATAAATCTGATTTCTTCCTaGTTTTTAGAGTTTCCCGAG +
Preference number: 2 (lower is better)
Translates to: LQSSKLVSVVHWRLRLRINLISS*FLEFPE
Trigger: CTCGGGAAACTCTAAAAAGCAGGAAGAAATCAGATT...TATTCTCAGTCTCAACCGCCAGTGAACTACGGAAACCAATTTACTGGATTGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441602.5
3UTR-3UTR CCA 90 bp AGCAATTGTTTCCTTATCACCTCCATGCTTGATCACATGCCATTCTGTGCCATCTTACTGAAGACTAAGTaGATTCCAGAGTTCATCATT +
Preference number: 2 (lower is better)
Translates to: SNCFLITSMLDHMPFCAILLKTK*IPEFII
Trigger: AATGATGAACTCTGGAATCCACTTAGTCTTCAGTAA...GATGGCACAGAATGGCATGTGATCAAGCATGGAGGTGATAAGGAAACAATTGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
3UTR-3UTR CCA 90 bp AGTAGCAATTGTTTCCTTATCACCTCCATGCTTGATCACATGCCATTCTGTGCCTTACTGAAGACTAAGTaGATTCCAGAGTTCATCATT +
Preference number: 2 (lower is better)
Translates to: SSNCFLITSMLDHMPFCALLKTK*IPEFII
Trigger: AATGATGAACTCTGGAATCCACTTAGTCTTCAGTAA...GGCACAGAATGGCATGTGATCAAGCATGGAGGTGATAAGGAAACAATTGCTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
3UTR-3UTR CCA 90 bp AGTAGCAATTGTTTCCTTATCACCTCCATGCTTGATCACATGCCATTCTGTGCCGTTGGCAAGAGTACATaGAAAATGGATTTTTATGTC +
Preference number: 2 (lower is better)
Translates to: SSNCFLITSMLDHMPFCAVGKST*KMDFYV
Trigger: GACATAAAAATCCATTTTCCATGTACTCTTGCCAAC...GGCACAGAATGGCATGTGATCAAGCATGGAGGTGATAAGGAAACAATTGCTACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
3UTR-3UTR CCA 90 bp TTTAGAGTTGTTCTTAGTCTACTACTACTAAGGCCGAGTCCAGTTGATTCCAATCAAATTGAGAACAGGTaGAAGCTTCTCCAGCTCATA +
Preference number: 2 (lower is better)
Translates to: FRVVLSLLLLRPSPVDSNQIENR*KLLQLI
Trigger: TATGAGCTGGAGAAGCTTCCACCTGTTCTCAATTTG...ATTGGAATCAACTGGACTCGGCCTTAGTAGTAGTAGACTAAGAACAACTCTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649152.1
3UTR CAA 90 bp CAGTTCACTTATACAACTGTAATGTTTAAAAGTGCTGGCAGCTTTTaGACATTCAAGGCACAACTGAATAGCTCCTGGATAATCTTCCTC +
Preference number: 2 (lower is better)
Translates to: QFTYTTVMFKSAGSF*TFKAQLNSSWIIFL
Trigger: GAGGAAGATTATCCAGGAGCTATTCAGTTGTGCCTTGAATGTCAAAAAGCTGCCAGCACTTTTAAACATTACAGTTGTATAAGTGAACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
3UTR-3UTR TCA 90 bp ATGTATAACTGTAGTCACATAACCATTGTTATGACAAGGCGGCAACATCATTTCCCGTACATTTATGAGTaGCTAGCAGACAACTGTTTC +
Preference number: 2 (lower is better)
Translates to: MYNCSHITIVMTRRQHHFPYIYE*LADNCF
Trigger: GAAACAGTTGTCTGCTAGTCACTCATAAATGTACGG...GAAATGATGTTGCCGCCTTGTCATAACAATGGTTATGTGACTACAGTTATACAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
3UTR-3UTR TCA 90 bp ATGTATAACTGTAGTCACATAACCATTGTTATGACAAGGCGGCAACATCATTTCATGACCGTACATTTATaGGTGACTAGCAGACAACTG +
Preference number: 2 (lower is better)
Translates to: MYNCSHITIVMTRRQHHFMTVHL*VTSRQL
Trigger: CAGTTGTCTGCTAGTCACTCATAAATGTACGGTCAT...GAAATGATGTTGCCGCCTTGTCATAACAATGGTTATGTGACTACAGTTATACAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
3UTR-3UTR GCA 90 bp GTCATGCTTTTCATGCCATTCCATAGTCCTATAATAGCTGAGCATAACTTCCCAGAACACACTAAAAGCTaGACTATAGTTCATGACATC +
Preference number: 2 (lower is better)
Translates to: VMLFMPFHSPIIAEHNFPEHTKS*TIVHDI
Trigger: GATGTCATGAACTATAGTGCAGCTTTTAGTGTGTTC...TGGGAAGTTATGCTCAGCTATTATAGGACTATGGAATGGCATGAAAAGCATGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649152.1
3UTR-3UTR GCA 90 bp CTCTCCAGTCAGAAAGAACACACACAAAATTCCTTATCAGACAGTTGGCAAGAGAATCATGATTCTGTATaGTACTCAGGCATTGAAAAG +
Preference number: 2 (lower is better)
Translates to: LSSQKEHTQNSLSDSWQENHDSV*YSGIEK
Trigger: CTTTTCAATGCCTGAGTAGCATACAGAATCATGATT...CTCTTGCCAACTGTCTGATAAGGAATTTTGTGTGTGTTCTTTCTGACTGGAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
3UTR-3UTR GCA 90 bp GCCAATCGTATACAATGTTCCCAAAGTATATTAGACACAGGCAAGGGTATGCGAAATGCTAATTTACCATaGTCCCATGGTAAATTCTAC +
Preference number: 2 (lower is better)
Translates to: ANRIQCSQSILDTGKGMRNANLP*SHGKFY
Trigger: GTAGAATTTACCATGGGAGCATGGTAAATTAGCATT...TCGCATACCCTTGCCTGTGTCTAATATACTTTGGGAACATTGTATACGATTGGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649152.1
3UTR-3UTR GCA 90 bp TGTTCCCAAAGTATATTAGACACAGGCAAGGGTATGCGAACTCTCTTAGAAACTATGAAGTTGATCCATTaGTGTCTGTGTTTTTCCAAG +
Preference number: 2 (lower is better)
Translates to: CSQSILDTGKGMRTLLETMKLIH*CLCFSK
Trigger: CTTGGAAAAACACAGACAGCAATGGATCAACTTCAT...AGTTTCTAAGAGAGTTCGCATACCCTTGCCTGTGTCTAATATACTTTGGGAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
3UTR-3UTR GCA 90 bp CATATTCTGAAAGTGCTTCACATTACACTGTGCATTTACAGACATCGCAGGGACAATTCTTCTCCAACTTaGATCAACCTGCTGATTATA +
Preference number: 2 (lower is better)
Translates to: HILKVLHITLCIYRHRRDNSSPT*INLLII
Trigger: TATAATCAGCAGGTTGATGCAAGTTGGAGAAGAATT...GTCCCTGCGATGTCTGTAAATGCACAGTGTAATGTGAAGCACTTTCAGAATATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649152.1
3UTR-3UTR GCA 90 bp CTACAGTACTGCTCAAACAAGGTCACTGTTTTTGAAGAAGTTGAGACTGGCTGTGTAAAACTTCAGACTTaGTACCACAAAATTCTTCTC +
Preference number: 2 (lower is better)
Translates to: LQYCSNKVTVFEEVETGCVKLQT*YHKILL
Trigger: GAGAAGAATTTTGTGGTAGCAAGTCTGAAGTTTTAC...ACAGCCAGTCTCAACTTCTTCAAAAACAGTGACCTTGTTTGAGCAGTACTGTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
3UTR-3UTR CCA 90 bp CATATTCTGAAAGTGCTTCACATTACACTGTGCATTTACAGACATCGCAGGGACTTACTGAAGACTAAGTaGATTCCAGAGTTCATCATT +
Preference number: 2 (lower is better)
Translates to: HILKVLHITLCIYRHRRDLLKTK*IPEFII
Trigger: AATGATGAACTCTGGAATCCACTTAGTCTTCAGTAA...GTCCCTGCGATGTCTGTAAATGCACAGTGTAATGTGAAGCACTTTCAGAATATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
3UTR-3UTR CCA 90 bp CTCATTGTCATGCTTTTCATGCCATTCCATAGTCCTATAATAGCTGAGCATAACTGGAATATAGCTGTCTaGTGTAACATGTGTACAGAG +
Preference number: 2 (lower is better)
Translates to: LIVMLFMPFHSPIIAEHNWNIAV*CNMCTE
Trigger: CTCTGTACACATGTTACACCAGACAGCTATATTCCA...GTTATGCTCAGCTATTATAGGACTATGGAATGGCATGAAAAGCATGACAATGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
3UTR CAA 90 bp GTCTCTAACAAGATAAGTAATTCTTTTGTATCAATTCCTATTACCTaGGAAAACACTGGGCTCTACCAGGCAGGTGATTCCTGTTCATAT +
Preference number: 2 (lower is better)
Translates to: VSNKISNSFVSIPIT*ENTGLYQAGDSCSY
Trigger: ATATGAACAGGAATCACCTGCCTGGTAGAGCCCAGTGTTTTCCAAGGTAATAGGAATTGATACAAAAGAATTACTTATCTTGTTAGAGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
3UTR-3UTR TCA 90 bp TGTTATGACAAGGCGGCAACATCATTTCAGATTACAACAAATGAGACCAAAAGTTCAGGTCATATATGTTaGGTGAGGATCAATGCCATT +
Preference number: 2 (lower is better)
Translates to: CYDKAATSFQITTNETKSSGHIC*VRINAI
Trigger: AATGGCATTGATCCTCACTCAACATATATGACCTGA...ACTTTTGGTCTCATTTGTTGTAATCTGAAATGATGTTGCCGCCTTGTCATAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000305866.10
ENST00000441602.5
ENST00000544910.5
ENST00000649152.1
3UTR-3UTR TCA 90 bp ATTATGCTTATTAAGAACCAAGCTCAGAGGGTAGAAAAGTGCCAACTTCATTTTTCTTTGTGGTTGGCCTaGATTTCAAATGGATTCCCA +
Preference number: 2 (lower is better)
Translates to: IMLIKNQAQRVEKCQLHFSLWLA*ISNGFP
Trigger: TGGGAATCCATTTGAAATTCAGGCCAACCACAAAGA...AAAATGAAGTTGGCACTTTTCTACCCTCTGAGCTTGGTTCTTAATAAGCATAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
3UTR-3UTR TCA 90 bp ACAGGTGGAAGCTTCTCCAGCTCATATTTAACAATATCAAATGAATCCACAGAAGTTCTCGAAGTTCCCTaGATTCTTCCAAAGTTAACA +
Preference number: 2 (lower is better)
Translates to: TGGSFSSSYLTISNESTEVLEVP*ILPKLT
Trigger: TGTTAACTTTGGAAGAATTCAGGGAACTTCGAGAAC...TTCTGTGGATTCATTTGATATTGTTAAATATGAGCTGGAGAAGCTTCCACCTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438395.5
3UTR-3UTR GCA 90 bp AGAACAGGTGGAAGCTTCTCCAGCTCATATTTAACAATATCAAATGAATCCACATACGCCTCTAATTCTTaGAAATTGAGAACAGGTGGA +
Preference number: 2 (lower is better)
Translates to: RTGGSFSSSYLTISNESTYASNS*KLRTGG
Trigger: TCCACCTGTTCTCAATTTGCAAGAATTAGAGGCGTA...TGTGGATTCATTTGATATTGTTAAATATGAGCTGGAGAAGCTTCCACCTGTTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436177.5
ENST00000438395.5
ENST00000649152.1
3UTR-3UTR CCA 90 bp CAAACATATTCTGAAAGTGCTTCACATTACACTGTGCATTTACAGACATCGCAGTCCTTATCAGACAGTTaGCAAGAGTACATGGAAAAT +
Preference number: 2 (lower is better)
Translates to: QTYSESASHYTVHLQTSQSLSDS*QEYMEN
Trigger: ATTTTCCATGTACTCTTGCCAACTGTCTGATAAGGA...CTGCGATGTCTGTAAATGCACAGTGTAATGTGAAGCACTTTCAGAATATGTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
3UTR-3UTR CCA 90 bp ATGTATAACTGTAGTCACATAACCATTGTTATGACAAGGCGGCAACATCATTTCGCTTTCTTATTGATATaGGATCCCAGGCAAACATTC +
Preference number: 2 (lower is better)
Translates to: MYNCSHITIVMTRRQHHFAFLLI*DPRQTF
Trigger: GAATGTTTGCCTGGGATCCCATATCAATAAGAAAGC...GAAATGATGTTGCCGCCTTGTCATAACAATGGTTATGTGACTACAGTTATACAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
3UTR-3UTR TCA 90 bp TTCCTTATCAGACAGTTGGCAAGAGTACATGGAAAATGGATTTTTATGTCACATTCAGGTCATATATGTTaGGTGAGGATCAATGCCATT +
Preference number: 2 (lower is better)
Translates to: FLIRQLARVHGKWIFMSHSGHIC*VRINAI
Trigger: AATGGCATTGATCCTCACTCAACATATATGACCTGA...ATGTGACATAAAAATCCATTTTCCATGTACTCTTGCCAACTGTCTGATAAGGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
3UTR-3UTR TCA 90 bp TCACATAACCATTGTTATGACAAGGCGGCAACATCATTTCAGATTACAACAAATCTAATTCTTGCAAATTaGGAACAGGTGGAAGCTTCT +
Preference number: 2 (lower is better)
Translates to: SHNHCYDKAATSFQITTNLILAN*EQVEAS
Trigger: AGAAGCTTCCACCTGTTCTCAATTTGCAAGAATTAG...ATTTGTTGTAATCTGAAATGATGTTGCCGCCTTGTCATAACAATGGTTATGTGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649152.1
3UTR-3UTR GCA 90 bp AATTCTTGCAAATTGAGAACAGGTGGAAGCTTCTCCAGCTCATATTTAACAATATACGCCTCTAATTCTTaGAAATTGAGAACAGGTGGA +
Preference number: 2 (lower is better)
Translates to: NSCKLRTGGSFSSSYLTIYASNS*KLRTGG
Trigger: TCCACCTGTTCTCAATTTGCAAGAATTAGAGGCGTA...TATTGTTAAATATGAGCTGGAGAAGCTTCCACCTGTTCTCAATTTGCAAGAATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436177.5
ENST00000438395.5
ENST00000649152.1
3UTR-3UTR GCA 90 bp TCACATAACCATTGTTATGACAAGGCGGCAACATCATTTCAGATTACAACAAATTACGCCTCTAATTCTTaGAAATTGAGAACAGGTGGA +
Preference number: 2 (lower is better)
Translates to: SHNHCYDKAATSFQITTNYASNS*KLRTGG
Trigger: TCCACCTGTTCTCAATTTGCAAGAATTAGAGGCGTA...ATTTGTTGTAATCTGAAATGATGTTGCCGCCTTGTCATAACAATGGTTATGTGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
3UTR-3UTR CCA 90 bp AATTTCTTTTACATCCCATTTCACATTAGCCATGAGAAGCAGCATCTGTTCATAAATTCTTGCAGATTTTaGAAAGAGCTACGTCCAGCT +
Preference number: 2 (lower is better)
Translates to: NFFYIPFHISHEKQHLFINSCRF*KELRPA
Trigger: AGCTGGACGTAGCTCTTTCCAAAATCTGCAAGAATT...TATGAACAGATGCTGCTTCTCATGGCTAATGTGAAATGGGATGTAAAAGAAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
3UTR-3UTR CCA 90 bp ATGTATAACTGTAGTCACATAACCATTGTTATGACAAGGCGGCAACATCATTTCCTTCATCTTTGTGGTTaGCCTGAATTTCAAATGGAT +
Preference number: 2 (lower is better)
Translates to: MYNCSHITIVMTRRQHHFLHLCG*PEFQMD
Trigger: ATCCATTTGAAATTCAGGCCAACCACAAAGATGAAG...GAAATGATGTTGCCGCCTTGTCATAACAATGGTTATGTGACTACAGTTATACAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
3UTR-3UTR CCA 90 bp ATTATGCTTATTAAGAACCAAGCTCAGAGGGTAGAAAAGTGCCAACTTCATTTTAAACATTCACCAGATTaGTCAGCTGCTTCGTTGAAT +
Preference number: 2 (lower is better)
Translates to: IMLIKNQAQRVEKCQLHFKHSPD*SAASLN
Trigger: ATTCAACGAAGCAGCTGACCAATCTGGTGAATGTTT...AAAATGAAGTTGGCACTTTTCTACCCTCTGAGCTTGGTTCTTAATAAGCATAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
3UTR CAA 90 bp AAGTTGATCCATTGCTGTCTGTGTTTTTCCAAGAAGTCGATAAGCTaGTTGAACCTTGGTATAATGGTTAATGTCAAAATTCTTGCAGAT +
Preference number: 2 (lower is better)
Translates to: KLIHCCLCFSKKSIS*LNLGIMVNVKILAD
Trigger: ATCTGCAAGAATTTTGACATTAACCATTATACCAAGGTTCAACAAGCTTATCGACTTCTTGGAAAAACACAGACAGCAATGGATCAACTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
3UTR-3UTR GCA 90 bp TTCCTTATCAGACAGTTGGCAAGAGTACATGGAAAATGGATTTTTATGTCACATGAACACACTAAAAGCTaGACTATAGTTCATGACATC +
Preference number: 2 (lower is better)
Translates to: FLIRQLARVHGKWIFMSHEHTKS*TIVHDI
Trigger: GATGTCATGAACTATAGTGCAGCTTTTAGTGTGTTC...ATGTGACATAAAAATCCATTTTCCATGTACTCTTGCCAACTGTCTGATAAGGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
3UTR-3UTR GCA 90 bp ATGTATAACTGTAGTCACATAACCATTGTTATGACAAGGCGGCAACATCATTTCAATCATGATTCTGTATaGTACTCAGGCATTGAAAAG +
Preference number: 2 (lower is better)
Translates to: MYNCSHITIVMTRRQHHFNHDSV*YSGIEK
Trigger: CTTTTCAATGCCTGAGTAGCATACAGAATCATGATT...GAAATGATGTTGCCGCCTTGTCATAACAATGGTTATGTGACTACAGTTATACAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
3UTR-3UTR CCA 90 bp ATGTATAACTGTAGTCACATAACCATTGTTATGACAAGGCGGCAACATCATTTCAATACCATATGGCCCTaGTTTCAAGAGAAATTCATT +
Preference number: 2 (lower is better)
Translates to: MYNCSHITIVMTRRQHHFNTIWP*FQEKFI
Trigger: AATGAATTTCTCTTGAAACCAGGGCCATATGGTATT...GAAATGATGTTGCCGCCTTGTCATAACAATGGTTATGTGACTACAGTTATACAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305866.10
ENST00000544910.5
3UTR-3UTR CCA 90 bp ATTATGCTTATTAAGAACCAAGCTCAGAGGGTAGAAAAGTGCCAACTTCATTTTGTTGGCAAGAGTACATaGAAAATGGATTTTTATGTC +
Preference number: 2 (lower is better)
Translates to: IMLIKNQAQRVEKCQLHFVGKST*KMDFYV
Trigger: GACATAAAAATCCATTTTCCATGTACTCTTGCCAAC...AAAATGAAGTTGGCACTTTTCTACCCTCTGAGCTTGGTTCTTAATAAGCATAAT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
3UTR TCA 72 bp ACAGCGTATCCCCAGATGTCAAAACCACTAGGTGACTaGGGTGTGGACTTGGCACCTTCTCCTTTCTTTCTT +
Preference number: 3 (lower is better)
Translates to: TAYPQMSKPLGD*GVDLAPSPFFL
Trigger: AAGAAAGAAAGGAGAAGGTGCCAAGTCCACACCTCAGTCACCTAGTGGTTTTGACATCTGGGGATACGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
3UTR GCA 72 bp CAAGAATACCAAGGATTCCGTGGCTACCACTCTTTCTaGCAACCCATACAGCGTATCCCCAGATGTCAAAAC +
Preference number: 3 (lower is better)
Translates to: QEYQGFRGYHSF*QPIQRIPRCQN
Trigger: GTTTTGACATCTGGGGATACGCTGTATGGGTTGGCAGAAAGAGTGGTAGCCACGGAATCCTTGGTATTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
3UTR GCA 72 bp TGGGATCCCAGGCAAACATTCACCAGATTGGTCAGCTaGTTCGTTGAATATTCCCTGTGCTCTTTGATCCAC +
Preference number: 3 (lower is better)
Translates to: WDPRQTFTRLVS*FVEYSLCSLIH
Trigger: GTGGATCAAAGAGCACAGGGAATATTCAACGAAGCAGCTGACCAATCTGGTGAATGTTTGCCTGGGATCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
3UTR-3UTR CAA 90 bp TTGTCTCTATACGCCTCTAATTCTTGCAAATTGAGAACAGGTGGAAGCTTCTCCCAGCTTGAGGGTCACTaGGCTGTTCTCGAAGTTCCC +
Preference number: 3 (lower is better)
Translates to: LSLYASNSCKLRTGGSFSQLEGH*AVLEVP
Trigger: GGGAACTTCGAGAACAGCCAAGTGACCCTCAAGCTG...GGAGAAGCTTCCACCTGTTCTCAATTTGCAAGAATTAGAGGCGTATAGAGACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436177.5
ENST00000438395.5
ENST00000649152.1
3UTR-3UTR CAA 90 bp ACCACTCTTTCTGCCAACCCATACAGCGTATCCCCAGATGTCAAAACCACTAGGACAAGGTCACTGTTTTaGAAGAAGTTGAGACTGGCT +
Preference number: 3 (lower is better)
Translates to: TTLSANPYSVSPDVKTTRTRSLF*KKLRLA
Trigger: AGCCAGTCTCAACTTCTTCAAAAACAGTGACCTTGT...CCTAGTGGTTTTGACATCTGGGGATACGCTGTATGGGTTGGCAGAAAGAGTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
3UTR-3UTR CAA 90 bp GCTTTCTTATTGATATGGGATCCCAGGCAAACATTCACCAGATTGGTCAGCTGCTATTCCCTGTGCTCTTaGATCCACCGTTCCATGTCA +
Preference number: 3 (lower is better)
Translates to: AFLLIWDPRQTFTRLVSCYSLCS*IHRSMS
Trigger: TGACATGGAACGGTGGATCAAAGAGCACAGGGAATA...GCAGCTGACCAATCTGGTGAATGTTTGCCTGGGATCCCATATCAATAAGAAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
3UTR TCA 72 bp GACCATCTCCTGTCTGCTCATCCACATAGTCTCGTTTaGGTTCCTCAGGAACATCACTGTCACTGTCATACT +
Preference number: 3 (lower is better)
Translates to: DHLLSAHPHSLV*VPQEHHCHCHT
Trigger: AGTATGACAGTGACAGTGATGTTCCTGAGGAACTCAAACGAGACTATGTGGATGAGCAGACAGGAGATGGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
3UTR-3UTR CAA 90 bp CTTGATCACATGCCATTCTGTGCCATCCATTTTATCACCTTAGGTCCCAGAAGAGGTGTTGTGAATGGCTaGGGTGAAGTGCATATGAAG +
Preference number: 3 (lower is better)
Translates to: LDHMPFCAIHFITLGPRRGVVNG*GEVHMK
Trigger: CTTCATATGCACTTCACCCAAGCCATTCACAACACC...TCTTCTGGGACCTAAGGTGATAAAATGGATGGCACAGAATGGCATGTGATCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649152.1
3UTR-3UTR CAA 90 bp AGACTTGCTACCACAAAATTCTTCTCCAACTTGCATCAACCTGCTGATTATATCCAGCTTGAGGGTCACTaGGCTGTTCTCGAAGTTCCC +
Preference number: 3 (lower is better)
Translates to: RLATTKFFSNLHQPADYIQLEGH*AVLEVP
Trigger: GGGAACTTCGAGAACAGCCAAGTGACCCTCAAGCTG...GATATAATCAGCAGGTTGATGCAAGTTGGAGAAGAATTTTGTGGTAGCAAGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649152.1
3UTR-3UTR CAA 90 bp CCATTTCACATTAGCCATGAGAAGCAGCATCTGTTCATAATCAAGGGCTTTACCAAGCTCTTGTTCAGCTaGAGGGTCACTTGGCTGTTC +
Preference number: 3 (lower is better)
Translates to: PFHISHEKQHLFIIKGFTKLLFS*RVTWLF
Trigger: GAACAGCCAAGTGACCCTCAAGCTGAACAAGAGCTT...GGTAAAGCCCTTGATTATGAACAGATGCTGCTTCTCATGGCTAATGTGAAATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649152.1
3UTR-3UTR CAA 90 bp CAGGGCACGACCCTCATTACTGCATTTCTTGACATTGGCATATCCTTCTACAATGCAGCTTTTGGAATTTaGTGTCTGTGTTTCCTGCAC +
Preference number: 3 (lower is better)
Translates to: QGTTLITAFLDIGISFYNAAFGI*CLCFLH
Trigger: GTGCAGGAAACACAGACACAAAATTCCAAAAGCTGC...ATTGTAGAAGGATATGCCAATGTCAAGAAATGCAGTAATGAGGGTCGTGCCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
3UTR-3UTR CAA 90 bp CACATAGTCTCGTTTGAGTTCCTCAGGAACATCACTGTCACTGTCATACTCTTGGCAGCTTTTGGAATTTaGTGTCTGTGTTTCCTGCAC +
Preference number: 3 (lower is better)
Translates to: HIVSFEFLRNITVTVILLAAFGI*CLCFLH
Trigger: GTGCAGGAAACACAGACACAAAATTCCAAAAGCTGC...CAAGAGTATGACAGTGACAGTGATGTTCCTGAGGAACTCAAACGAGACTATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
3UTR-3UTR CAA 90 bp ATTCACCCTCACATTATGCTTATTAAGAACCAAGCTCAGAGGGTAGAAAAGTGCACTTCCCATAGTGCTTaGCACAGGTCTGCAAGGCAT +
Preference number: 3 (lower is better)
Translates to: IHPHIMLIKNQAQRVEKCTSHSA*HRSARH
Trigger: ATGCCTTGCAGACCTGTGCAAAGCACTATGGGAAGT...GCACTTTTCTACCCTCTGAGCTTGGTTCTTAATAAGCATAATGTGAGGGTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
3UTR-3UTR CAA 90 bp CCATTTCACATTAGCCATGAGAAGCAGCATCTGTTCATAATCAAGGGCTTTACCGTAGTTCACTGGCGGTaGAGACTGAGAATAGAACTG +
Preference number: 3 (lower is better)
Translates to: PFHISHEKQHLFIIKGFTVVHWR*RLRIEL
Trigger: CAGTTCTATTCTCAGTCTCAACCGCCAGTGAACTAC...GGTAAAGCCCTTGATTATGAACAGATGCTGCTTCTCATGGCTAATGTGAAATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441602.5
3UTR-3UTR CAA 90 bp AGAGTAGCAATTGTTTCCTTATCACCTCCATGCTTGATCACATGCCATTCTGTGTGGTCAGCTGCTTCGTaGAATATTCCCTGTGCTCTT +
Preference number: 3 (lower is better)
Translates to: RVAIVSLSPPCLITCHSVWSAAS*NIPCAL
Trigger: AAGAGCACAGGGAATATTCAACGAAGCAGCTGACCA...CACAGAATGGCATGTGATCAAGCATGGAGGTGATAAGGAAACAATTGCTACTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649152.1
3UTR-3UTR CAA 90 bp AGAACAGGTGGAAGCTTCTCCAGCTCATATTTAACAATATCAAATGAATCCACACAGCTTGAGGGTCACTaGGCTGTTCTCGAAGTTCCC +
Preference number: 3 (lower is better)
Translates to: RTGGSFSSSYLTISNESTQLEGH*AVLEVP
Trigger: GGGAACTTCGAGAACAGCCAAGTGACCCTCAAGCTG...TGTGGATTCATTTGATATTGTTAAATATGAGCTGGAGAAGCTTCCACCTGTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436177.5
ENST00000438395.5
ENST00000649152.1
3UTR-3UTR CAA 90 bp GCCTCTAATTCTTGCAAATTGAGAACAGGTGGAAGCTTCTCCAGCTCATATTTAAAGCTCTTGTTCAGCTaGAGGGTCACTTGGCTGTTC +
Preference number: 3 (lower is better)
Translates to: ASNSCKLRTGGSFSSSYLKLLFS*RVTWLF
Trigger: GAACAGCCAAGTGACCCTCAAGCTGAACAAGAGCTT...TAAATATGAGCTGGAGAAGCTTCCACCTGTTCTCAATTTGCAAGAATTAGAGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436177.5
ENST00000438395.5
ENST00000649152.1
3UTR TCA 72 bp CACATTACACTGTGCATTTACAGACATCGCAGGGACTaGTGGACACAGAGTAGCAATTGTTTCCTTATCACC +
Preference number: 3 (lower is better)
Translates to: HITLCIYRHRRD*WTQSSNCFLIT
Trigger: GGTGATAAGGAAACAATTGCTACTCTGTGTCCATCAGTCCCTGCGATGTCTGTAAATGCACAGTGTAATGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
3UTR TCA 72 bp GAACAACTTGAAACACGGTGTTGTGAATGGCTTGGGTaGAGTGCATATGAAGTTGATCCATTGCTGTCTGTG +
Preference number: 3 (lower is better)
Translates to: EQLETRCCEWLG*SAYEVDPLLSV
Trigger: CACAGACAGCAATGGATCAACTTCATATGCACTTCACCCAAGCCATTCACAACACCGTGTTTCAAGTTGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
3UTR CCA 72 bp CAGCTACAATCCAGTAAATTGGTTTCCGTAGTTCACTaGCGGTTGAGACTGTCTGAGAATAGAACTGCTGAA +
Preference number: 3 (lower is better)
Translates to: QLQSSKLVSVVH*RLRLSENRTAE
Trigger: TTCAGCAGTTCTATTCTCAGACAGTCTCAACCGCCAGTGAACTACGGAAACCAATTTACTGGATTGTAGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649152.1
3UTR-3UTR CAA 90 bp AGAGTAGCAATTGTTTCCTTATCACCTCCATGCTTGATCACATGCCATTCTGTGTTATCACCTCCATGCTaGATCACATGCCATTCTGTG +
Preference number: 3 (lower is better)
Translates to: RVAIVSLSPPCLITCHSVLSPPC*ITCHSV
Trigger: CACAGAATGGCATGTGATCAAGCATGGAGGTGATAA...CACAGAATGGCATGTGATCAAGCATGGAGGTGATAAGGAAACAATTGCTACTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
3UTR-3UTR CAA 90 bp AGAGTAGCAATTGTTTCCTTATCACCTCCATGCTTGATCACATGCCATTCTGTGAAAAGGTCTGTCAGATaGCATGGTCGAGTCTCTAAC +
Preference number: 3 (lower is better)
Translates to: RVAIVSLSPPCLITCHSVKRSVR*HGRVSN
Trigger: GTTAGAGACTCGACCATGCAATCTGACAGACCTTTT...CACAGAATGGCATGTGATCAAGCATGGAGGTGATAAGGAAACAATTGCTACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
3UTR-3UTR CAA 90 bp CAGGGCACGACCCTCATTACTGCATTTCTTGACATTGGCATATCCTTCTACAATGAAGCAGTATCCTCATaGTCATGCTTTTCATGCCAT +
Preference number: 3 (lower is better)
Translates to: QGTTLITAFLDIGISFYNEAVSS*SCFSCH
Trigger: ATGGCATGAAAAGCATGACAATGAGGATACTGCTTC...ATTGTAGAAGGATATGCCAATGTCAAGAAATGCAGTAATGAGGGTCGTGCCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
3UTR-3UTR CAA 90 bp AATTTGTCTCTATACGCCTCTAATTCTTGCAAATTGAGAACAGGTGGAAGCTTCAAGCTCTTGTTCAGCTaGAGGGTCACTTGGCTGTTC +
Preference number: 3 (lower is better)
Translates to: NLSLYASNSCKLRTGGSFKLLFS*RVTWLF
Trigger: GAACAGCCAAGTGACCCTCAAGCTGAACAAGAGCTT...GAAGCTTCCACCTGTTCTCAATTTGCAAGAATTAGAGGCGTATAGAGACAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436177.5
ENST00000438395.5
ENST00000649152.1
3UTR GCA 72 bp GGACACAGAGTAGCAATTGTTTCCTTATCACCTCCATaGTTGATCACATGCCATTCTGTGCCATCCATTTTA +
Preference number: 3 (lower is better)
Translates to: GHRVAIVSLSPP*LITCHSVPSIL
Trigger: TAAAATGGATGGCACAGAATGGCATGTGATCAAGCATGGAGGTGATAAGGAAACAATTGCTACTCTGTGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
3UTR CCA 72 bp CAGCTACAATCCAGTAAATTGGTTTCCGTAGTTCACTaGCGGTTGAGACTGAGAATAGAACTGCTGAAGAAA +
Preference number: 3 (lower is better)
Translates to: QLQSSKLVSVVH*RLRLRIELLKK
Trigger: TTTCTTCAGCAGTTCTATTCTCAGTCTCAACCGCCAGTGAACTACGGAAACCAATTTACTGGATTGTAGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441602.5
3UTR-3UTR CAA 90 bp CACATAGTCTCGTTTGAGTTCCTCAGGAACATCACTGTCACTGTCATACTCTTGTTCAGGTCATATATGTaGAGTGAGGATCAATGCCAT +
Preference number: 3 (lower is better)
Translates to: HIVSFEFLRNITVTVILLFRSYM*SEDQCH
Trigger: ATGGCATTGATCCTCACTCAACATATATGACCTGAA...CAAGAGTATGACAGTGACAGTGATGTTCCTGAGGAACTCAAACGAGACTATGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
3UTR-3UTR CAA 90 bp AGTAGCAATTGTTTCCTTATCACCTCCATGCTTGATCACATGCCATTCTGTGCCTTCCTTATCAGACAGTaGGCAAGAGTACATGGAAAA +
Preference number: 3 (lower is better)
Translates to: SSNCFLITSMLDHMPFCAFLIRQ*ARVHGK
Trigger: TTTTCCATGTACTCTTGCCAACTGTCTGATAAGGAA...GGCACAGAATGGCATGTGATCAAGCATGGAGGTGATAAGGAAACAATTGCTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
3UTR-3UTR CAA 90 bp AGCAATTGTTTCCTTATCACCTCCATGCTTGATCACATGCCATTCTGTGCCATCTTCCTTATCAGACAGTaGGCAAGAGTACATGGAAAA +
Preference number: 3 (lower is better)
Translates to: SNCFLITSMLDHMPFCAIFLIRQ*ARVHGK
Trigger: TTTTCCATGTACTCTTGCCAACTGTCTGATAAGGAA...GATGGCACAGAATGGCATGTGATCAAGCATGGAGGTGATAAGGAAACAATTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
3UTR-3UTR CAA 90 bp ATTCACCCTCACATTATGCTTATTAAGAACCAAGCTCAGAGGGTAGAAAAGTGCTTATCACCTCCATGCTaGATCACATGCCATTCTGTG +
Preference number: 3 (lower is better)
Translates to: IHPHIMLIKNQAQRVEKCLSPPC*ITCHSV
Trigger: CACAGAATGGCATGTGATCAAGCATGGAGGTGATAA...GCACTTTTCTACCCTCTGAGCTTGGTTCTTAATAAGCATAATGTGAGGGTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
3UTR-3UTR CAA 90 bp GTTCACTGGCGGTTGAGACTGAGAATAGAACTGCTGAAGAAAGGGCTTTTTGACTTTAGATACTGCAGCTaGCTGTTGTTTCAATTTGTC +
Preference number: 3 (lower is better)
Translates to: VHWRLRLRIELLKKGLFDFRYCS*LLFQFV
Trigger: GACAAATTGAAACAACAGCAAGCTGCAGTATCTAAA...GTCAAAAAGCCCTTTCTTCAGCAGTTCTATTCTCAGTCTCAACCGCCAGTGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441602.5
3UTR-3UTR CAA 90 bp TACAGGTCATGCATGGCAATCATTGGACCAATGCCACACAAGCTTAGATGTCCTAAGAAGTCGATAAGCTaGTTGAACCTTGGTATAATG +
Preference number: 3 (lower is better)
Translates to: YRSCMAIIGPMPHKLRCPKKSIS*LNLGIM
Trigger: CATTATACCAAGGTTCAACAAGCTTATCGACTTCTT...AGGACATCTAAGCTTGTGTGGCATTGGTCCAATGATTGCCATGCATGACCTGTA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649152.1
3UTR TCA 72 bp TTCAGGGCAAAGTTTAGAGGAACAGCACATACTTACTaGAGACTAAGTGGATTCCAGAGTTCATCATTGGCT +
Preference number: 3 (lower is better)
Translates to: FRAKFRGTAHTY*RLSGFQSSSLA
Trigger: AGCCAATGATGAACTCTGGAATCCACTTAGTCTTCAGTAAGTATGTGCTGTTCCTCTAAACTTTGCCCTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
3UTR-3UTR CAA 90 bp CTCTCCAGTCAGAAAGAACACACACAAAATTCCTTATCAGACAGTTGGCAAGAGTTCAGGTCATATATGTaGAGTGAGGATCAATGCCAT +
Preference number: 3 (lower is better)
Translates to: LSSQKEHTQNSLSDSWQEFRSYM*SEDQCH
Trigger: ATGGCATTGATCCTCACTCAACATATATGACCTGAA...CTCTTGCCAACTGTCTGATAAGGAATTTTGTGTGTGTTCTTTCTGACTGGAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
3UTR-3UTR CAA 90 bp TCCTTAGGATTCTGTGAGCTGTTGATGTTACAGGTCATGCATGGCAATCATTGGTTCCAGAGTTCATCATaGGCTAGACTGATACTATTT +
Preference number: 3 (lower is better)
Translates to: SLGFCELLMLQVMHGNHWFQSSS*ARLILF
Trigger: AAATAGTATCAGTCTAGCCAATGATGAACTCTGGAA...CCAATGATTGCCATGCATGACCTGTAACATCAACAGCTCACAGAATCCTAAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
3UTR-3UTR CAA 90 bp GCCAATCGTATACAATGTTCCCAAAGTATATTAGACACAGGCAAGGGTATGCGATTCCTTATCAGACAGTaGGCAAGAGTACATGGAAAA +
Preference number: 3 (lower is better)
Translates to: ANRIQCSQSILDTGKGMRFLIRQ*ARVHGK
Trigger: TTTTCCATGTACTCTTGCCAACTGTCTGATAAGGAA...TCGCATACCCTTGCCTGTGTCTAATATACTTTGGGAACATTGTATACGATTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649152.1
3UTR-3UTR CAA 90 bp TGTTCCCAAAGTATATTAGACACAGGCAAGGGTATGCGAACTCTCTTAGAAACTAAATTCTTGCAGATTTaGGAAAGAGCTACGTCCAGC +
Preference number: 3 (lower is better)
Translates to: CSQSILDTGKGMRTLLETKFLQI*ERATSS
Trigger: GCTGGACGTAGCTCTTTCCAAAATCTGCAAGAATTT...AGTTTCTAAGAGAGTTCGCATACCCTTGCCTGTGTCTAATATACTTTGGGAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
3UTR-3UTR CAA 90 bp ACAAATCAGTTCCAAGCAAGTAGGTTTTTACTTTTAGCTGAACATCCTGCCATAGGTGTTGTGAATGGCTaGGGTGAAGTGCATATGAAG +
Preference number: 3 (lower is better)
Translates to: TNQFQASRFLLLAEHPAIGVVNG*GEVHMK
Trigger: CTTCATATGCACTTCACCCAAGCCATTCACAACACC...TATGGCAGGATGTTCAGCTAAAAGTAAAAACCTACTTGCTTGGAACTGATTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
3UTR-3UTR CAA 90 bp AGTAGCAATTGTTTCCTTATCACCTCCATGCTTGATCACATGCCATTCTGTGCCATAACCAAGAACAACTaGAAACACGGTGTTGTGAAT +
Preference number: 3 (lower is better)
Translates to: SSNCFLITSMLDHMPFCAITKNN*KHGVVN
Trigger: ATTCACAACACCGTGTTTCAAGTTGTTCTTGGTTAT...GGCACAGAATGGCATGTGATCAAGCATGGAGGTGATAAGGAAACAATTGCTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649152.1
3UTR-3UTR CAA 90 bp TTCCTTATCAGACAGTTGGCAAGAGTACATGGAAAATGGATTTTTATGTCACATACTTCCCATAGTGCTTaGCACAGGTCTGCAAGGCAT +
Preference number: 3 (lower is better)
Translates to: FLIRQLARVHGKWIFMSHTSHSA*HRSARH
Trigger: ATGCCTTGCAGACCTGTGCAAAGCACTATGGGAAGT...ATGTGACATAAAAATCCATTTTCCATGTACTCTTGCCAACTGTCTGATAAGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649152.1
3UTR-3UTR CAA 90 bp ATTATGCTTATTAAGAACCAAGCTCAGAGGGTAGAAAAGTGCCAACTTCATTTTCTGTTGAAAATCCAATaGCATCAGGGCACGACCCTC +
Preference number: 3 (lower is better)
Translates to: IMLIKNQAQRVEKCQLHFLLKIQ*HQGTTL
Trigger: GAGGGTCGTGCCCTGATGCAATTGGATTTTCAACAG...AAAATGAAGTTGGCACTTTTCTACCCTCTGAGCTTGGTTCTTAATAAGCATAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
3UTR-3UTR CAA 90 bp ATTCACCCTCACATTATGCTTATTAAGAACCAAGCTCAGAGGGTAGAAAAGTGCTTCAGGTCATATATGTaGAGTGAGGATCAATGCCAT +
Preference number: 3 (lower is better)
Translates to: IHPHIMLIKNQAQRVEKCFRSYM*SEDQCH
Trigger: ATGGCATTGATCCTCACTCAACATATATGACCTGAA...GCACTTTTCTACCCTCTGAGCTTGGTTCTTAATAAGCATAATGTGAGGGTGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000305866.10
ENST00000441602.5
ENST00000544910.5
ENST00000649152.1
3UTR-3UTR CAA 90 bp CTACAGTACTGCTCAAACAAGGTCACTGTTTTTGAAGAAGTTGAGACTGGCTGTAAGAAGTCGATAAGCTaGTTGAACCTTGGTATAATG +
Preference number: 3 (lower is better)
Translates to: LQYCSNKVTVFEEVETGCKKSIS*LNLGIM
Trigger: CATTATACCAAGGTTCAACAAGCTTATCGACTTCTT...ACAGCCAGTCTCAACTTCTTCAAAAACAGTGACCTTGTTTGAGCAGTACTGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
3UTR-3UTR CAA 90 bp AGACTTGCTACCACAAAATTCTTCTCCAACTTGCATCAACCTGCTGATTATATCGAAGTGCATATGAAGTaGATCCATTGCTGTCTGTGT +
Preference number: 3 (lower is better)
Translates to: RLATTKFFSNLHQPADYIEVHMK*IHCCLC
Trigger: ACACAGACAGCAATGGATCAACTTCATATGCACTTC...GATATAATCAGCAGGTTGATGCAAGTTGGAGAAGAATTTTGTGGTAGCAAGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
3UTR-3UTR CAA 90 bp ATTCACCCTCACATTATGCTTATTAAGAACCAAGCTCAGAGGGTAGAAAAGTGCACTATTAATAAGCTCTaGTTCAGCTTGAGGGTCACT +
Preference number: 3 (lower is better)
Translates to: IHPHIMLIKNQAQRVEKCTINKL*FSLRVT
Trigger: AGTGACCCTCAAGCTGAACAAGAGCTTATTAATAGT...GCACTTTTCTACCCTCTGAGCTTGGTTCTTAATAAGCATAATGTGAGGGTGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649152.1
3UTR GCA 72 bp TGTTGTTTCAATTTGTCTCTATACGCCTCTAATTCTTaGAAATTGAGAACAGGTGGAAGCTTCTCCAGCTCA +
Preference number: 3 (lower is better)
Translates to: CCFNLSLYASNS*KLRTGGSFSSS
Trigger: TGAGCTGGAGAAGCTTCCACCTGTTCTCAATTTGCAAGAATTAGAGGCGTATAGAGACAAATTGAAACAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436177.5
ENST00000438395.5
ENST00000649152.1
3UTR-3UTR CAA 90 bp ATGTATAACTGTAGTCACATAACCATTGTTATGACAAGGCGGCAACATCATTTCCCTCCTGTTACTGTTTaGATGCTAGCTAGCACTTAT +
Preference number: 3 (lower is better)
Translates to: MYNCSHITIVMTRRQHHFPPVTV*MLASTY
Trigger: ATAAGTGCTAGCTAGCATCAAAACAGTAACAGGAGG...GAAATGATGTTGCCGCCTTGTCATAACAATGGTTATGTGACTACAGTTATACAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
3UTR-3UTR CAA 90 bp ATTCACCCTCACATTATGCTTATTAAGAACCAAGCTCAGAGGGTAGAAAAGTGCAAATTCTTCTCCAACTaGCATCAACCTGCTGATTAT +
Preference number: 3 (lower is better)
Translates to: IHPHIMLIKNQAQRVEKCKFFSN*HQPADY
Trigger: ATAATCAGCAGGTTGATGCAAGTTGGAGAAGAATTT...GCACTTTTCTACCCTCTGAGCTTGGTTCTTAATAAGCATAATGTGAGGGTGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
3UTR-3UTR CAA 90 bp TTTAGAGTTGTTCTTAGTCTACTACTACTAAGGCCGAGTCCAGTTGATTCCAATATAGGCACTCTTTTCTaGTTCATCAGATTCATACCC +
Preference number: 3 (lower is better)
Translates to: FRVVLSLLLLRPSPVDSNIGTLF*FIRFIP
Trigger: GGGTATGAATCTGATGAACAAGAAAAGAGTGCCTAT...ATTGGAATCAACTGGACTCGGCCTTAGTAGTAGTAGACTAAGAACAACTCTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
3UTR-3UTR CAA 90 bp ATGTATAACTGTAGTCACATAACCATTGTTATGACAAGGCGGCAACATCATTTCGTCACTGTCATACTCTaGATAGGCACTCTTTTCTTG +
Preference number: 3 (lower is better)
Translates to: MYNCSHITIVMTRRQHHFVTVIL*IGTLFL
Trigger: CAAGAAAAGAGTGCCTATCAAGAGTATGACAGTGAC...GAAATGATGTTGCCGCCTTGTCATAACAATGGTTATGTGACTACAGTTATACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
3UTR-3UTR CAA 90 bp ATGTATAACTGTAGTCACATAACCATTGTTATGACAAGGCGGCAACATCATTTCTTCAGGTCATATATGTaGAGTGAGGATCAATGCCAT +
Preference number: 3 (lower is better)
Translates to: MYNCSHITIVMTRRQHHFFRSYM*SEDQCH
Trigger: ATGGCATTGATCCTCACTCAACATATATGACCTGAA...GAAATGATGTTGCCGCCTTGTCATAACAATGGTTATGTGACTACAGTTATACAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000305866.10
ENST00000441602.5
ENST00000544910.5
ENST00000649152.1
3UTR-3UTR CAA 90 bp ATGTATAACTGTAGTCACATAACCATTGTTATGACAAGGCGGCAACATCATTTCAAGCTTATCTCATGTTaGTTTTCTTCAAGTGGCTGC +
Preference number: 3 (lower is better)
Translates to: MYNCSHITIVMTRRQHHFKLISC*FSSSGC
Trigger: GCAGCCACTTGAAGAAAACAAACATGAGATAAGCTT...GAAATGATGTTGCCGCCTTGTCATAACAATGGTTATGTGACTACAGTTATACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
3UTR-3UTR CAA 90 bp AATTTGTCTCTATACGCCTCTAATTCTTGCAAATTGAGAACAGGTGGAAGCTTCTACTGCAGCTTGCTGTaGTTTCAATTTGTCTCTATA +
Preference number: 3 (lower is better)
Translates to: NLSLYASNSCKLRTGGSFYCSLL*FQFVSI
Trigger: TATAGAGACAAATTGAAACAACAGCAAGCTGCAGTA...GAAGCTTCCACCTGTTCTCAATTTGCAAGAATTAGAGGCGTATAGAGACAAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436177.5
ENST00000438395.5
ENST00000649152.1
3UTR-3UTR CAA 90 bp AATTTGTCTCTATACGCCTCTAATTCTTGCAAATTGAGAACAGGTGGAAGCTTCTTTAGATACTGCAGCTaGCTGTTGTTTCAATTTGTC +
Preference number: 3 (lower is better)
Translates to: NLSLYASNSCKLRTGGSFFRYCS*LLFQFV
Trigger: GACAAATTGAAACAACAGCAAGCTGCAGTATCTAAA...GAAGCTTCCACCTGTTCTCAATTTGCAAGAATTAGAGGCGTATAGAGACAAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436177.5
ENST00000438395.5
ENST00000649152.1
3UTR-3UTR CAA 90 bp AGACTTGCTACCACAAAATTCTTCTCCAACTTGCATCAACCTGCTGATTATATCTATGAAGTTGATCCATaGCTGTCTGTGTTTTTCCAA +
Preference number: 3 (lower is better)
Translates to: RLATTKFFSNLHQPADYIYEVDP*LSVFFQ
Trigger: TTGGAAAAACACAGACAGCAATGGATCAACTTCATA...GATATAATCAGCAGGTTGATGCAAGTTGGAGAAGAATTTTGTGGTAGCAAGTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
3UTR-3UTR CAA 90 bp TTTAGAGTTGTTCTTAGTCTACTACTACTAAGGCCGAGTCCAGTTGATTCCAATAAATTCTTCTCCAACTaGCATCAACCTGCTGATTAT +
Preference number: 3 (lower is better)
Translates to: FRVVLSLLLLRPSPVDSNKFFSN*HQPADY
Trigger: ATAATCAGCAGGTTGATGCAAGTTGGAGAAGAATTT...ATTGGAATCAACTGGACTCGGCCTTAGTAGTAGTAGACTAAGAACAACTCTAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
3UTR-3UTR CAA 90 bp AATTTCTTTTACATCCCATTTCACATTAGCCATGAGAAGCAGCATCTGTTCATAACAAGGTCACTGTTTTaGAAGAAGTTGAGACTGGCT +
Preference number: 3 (lower is better)
Translates to: NFFYIPFHISHEKQHLFITRSLF*KKLRLA
Trigger: AGCCAGTCTCAACTTCTTCAAAAACAGTGACCTTGT...TATGAACAGATGCTGCTTCTCATGGCTAATGTGAAATGGGATGTAAAAGAAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
3UTR-3UTR CAA 90 bp TCTAATTCTTGCAAATTGAGAACAGGTGGAAGCTTCTCCAGCTCATATTTAACAACTATTAATAAGCTCTaGTTCAGCTTGAGGGTCACT +
Preference number: 3 (lower is better)
Translates to: SNSCKLRTGGSFSSSYLTTINKL*FSLRVT
Trigger: AGTGACCCTCAAGCTGAACAAGAGCTTATTAATAGT...TGTTAAATATGAGCTGGAGAAGCTTCCACCTGTTCTCAATTTGCAAGAATTAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436177.5
ENST00000438395.5
ENST00000649152.1
3UTR-3UTR CAA 90 bp ACAGGTGGAAGCTTCTCCAGCTCATATTTAACAATATCAAATGAATCCACAGAAACTATTAATAAGCTCTaGTTCAGCTTGAGGGTCACT +
Preference number: 3 (lower is better)
Translates to: TGGSFSSSYLTISNESTETINKL*FSLRVT
Trigger: AGTGACCCTCAAGCTGAACAAGAGCTTATTAATAGT...TTCTGTGGATTCATTTGATATTGTTAAATATGAGCTGGAGAAGCTTCCACCTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436177.5
ENST00000438395.5
ENST00000649152.1
3UTR TCA 72 bp ATATTTAAGAAGAGTGAACATATGACCGTACATTTATaGGTGACTAGCAGACAACTGTTTCCTGAGTCAGTC +
Preference number: 3 (lower is better)
Translates to: IFKKSEHMTVHL*VTSRQLFPESV
Trigger: GACTGACTCAGGAAACAGTTGTCTGCTAGTCACTCATAAATGTACGGTCATATGTTCACTCTTCTTAAATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
3UTR-3UTR CAA 90 bp AGAACAGGTGGAAGCTTCTCCAGCTCATATTTAACAATATCAAATGAATCCACATACTGCAGCTTGCTGTaGTTTCAATTTGTCTCTATA +
Preference number: 3 (lower is better)
Translates to: RTGGSFSSSYLTISNESTYCSLL*FQFVSI
Trigger: TATAGAGACAAATTGAAACAACAGCAAGCTGCAGTA...TGTGGATTCATTTGATATTGTTAAATATGAGCTGGAGAAGCTTCCACCTGTTCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436177.5
ENST00000438395.5
ENST00000649152.1
3UTR-3UTR CAA 90 bp TCTAATTCTTGCAAATTGAGAACAGGTGGAAGCTTCTCCAGCTCATATTTAACATACTGCAGCTTGCTGTaGTTTCAATTTGTCTCTATA +
Preference number: 3 (lower is better)
Translates to: SNSCKLRTGGSFSSSYLTYCSLL*FQFVSI
Trigger: TATAGAGACAAATTGAAACAACAGCAAGCTGCAGTA...TGTTAAATATGAGCTGGAGAAGCTTCCACCTGTTCTCAATTTGCAAGAATTAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436177.5
ENST00000438395.5
ENST00000649152.1
3UTR-3UTR CAA 90 bp TCACATAACCATTGTTATGACAAGGCGGCAACATCATTTCAGATTACAACAAATTACTGCAGCTTGCTGTaGTTTCAATTTGTCTCTATA +
Preference number: 3 (lower is better)
Translates to: SHNHCYDKAATSFQITTNYCSLL*FQFVSI
Trigger: TATAGAGACAAATTGAAACAACAGCAAGCTGCAGTA...ATTTGTTGTAATCTGAAATGATGTTGCCGCCTTGTCATAACAATGGTTATGTGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
3UTR-3UTR CAA 90 bp AATTCTTGCAAATTGAGAACAGGTGGAAGCTTCTCCAGCTCATATTTAACAATATTTAGATACTGCAGCTaGCTGTTGTTTCAATTTGTC +
Preference number: 3 (lower is better)
Translates to: NSCKLRTGGSFSSSYLTIFRYCS*LLFQFV
Trigger: GACAAATTGAAACAACAGCAAGCTGCAGTATCTAAA...TATTGTTAAATATGAGCTGGAGAAGCTTCCACCTGTTCTCAATTTGCAAGAATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436177.5
ENST00000438395.5
ENST00000649152.1
CDS-3UTR GCA 90 bp GGAACTGCAGGAGTCAGAAACGGGGCTGAAAAACGATCAAGCTACAGGTTCACACCGGGAGGCGGAGCTTaGAGTGAGTGGAGATGCGCC +
Preference number: 4 (lower is better)
Translates to: GTAGVRNGAEKRSSYRFTPGGGA*SEWRCA
Trigger: GGCGCATCTCCACTCACTGCAAGCTCCGCCTCCCGG...TGTGAACCTGTAGCTTGATCGTTTTTCAGCCCCGTTTCTGACTCCTGCAGTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458707.1
CDS-3UTR TCA 90 bp CTACTTAGAATCAAGCTGGAACTGCAGGAGTCAGAAACGGGGCTGAAAAACGATAGGCGGAGCTTGCAGTaGGTGGAGATGCGCCACTGT +
Preference number: 4 (lower is better)
Translates to: LLRIKLELQESETGLKNDRRSLQ*VEMRHC
Trigger: ACAGTGGCGCATCTCCACTCACTGCAAGCTCCGCCT...ATCGTTTTTCAGCCCCGTTTCTGACTCCTGCAGTTCCAGCTTGATTCTAAGTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458707.1
CDS-3UTR GCA 90 bp CAAGCTGGAACTGCAGGAGTCAGAAACGGGGCTGAAAAACGATCAAGCTACAGGGAATCAAGCTGGAACTaGAGGAGTCAGAAACGGGGC +
Preference number: 4 (lower is better)
Translates to: QAGTAGVRNGAEKRSSYRESSWN*RSQKRG
Trigger: GCCCCGTTTCTGACTCCTGCAGTTCCAGCTTGATTC...CCTGTAGCTTGATCGTTTTTCAGCCCCGTTTCTGACTCCTGCAGTTCCAGCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000458707.1
CDS-3UTR GCA 90 bp CAAGCTGGAACTGCAGGAGTCAGAAACGGGGCTGAAAAACGATCAAGCTACAGGCTTCCCATAGTGCTTTaGACAGGTCTGCAAGGCATG +
Preference number: 4 (lower is better)
Translates to: QAGTAGVRNGAEKRSSYRLPIVL*TGLQGM
Trigger: CATGCCTTGCAGACCTGTGCAAAGCACTATGGGAAG...CCTGTAGCTTGATCGTTTTTCAGCCCCGTTTCTGACTCCTGCAGTTCCAGCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458707.1
CDS-3UTR TCA 90 bp TTGGACCAATGCCACACAAGCTTAGATGTCCTCCACTCTCCAGTCAGAAAGAACAAACCACTAGGTGACTaGGGTGTGGACTTGGCACCT +
Preference number: 4 (lower is better)
Translates to: LDQCHTSLDVLHSPVRKNKPLGD*GVDLAP
Trigger: AGGTGCCAAGTCCACACCTCAGTCACCTAGTGGTTT...GTTCTTTCTGACTGGAGAGTGGAGGACATCTAAGCTTGTGTGGCATTGGTCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR TCA 90 bp GCTTTCTTATTGATATGGGATCCCAGGCAAACATTCACCAGATTGGTCAGCTGCTGCATATCGAAATCCTaGGGAGGGTACCCTGCCTCA +
Preference number: 4 (lower is better)
Translates to: AFLLIWDPRQTFTRLVSCCISKS*GGYPAS
Trigger: TGAGGCAGGGTACCCTCCTCAGGATTTCGATATGCA...GCAGCTGACCAATCTGGTGAATGTTTGCCTGGGATCCCATATCAATAAGAAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
CDS-3UTR TCA 90 bp TACAGGTCATGCATGGCAATCATTGGACCAATGCCACACAAGCTTAGATGTCCTAAACCACTAGGTGACTaGGGTGTGGACTTGGCACCT +
Preference number: 4 (lower is better)
Translates to: YRSCMAIIGPMPHKLRCPKPLGD*GVDLAP
Trigger: AGGTGCCAAGTCCACACCTCAGTCACCTAGTGGTTT...AGGACATCTAAGCTTGTGTGGCATTGGTCCAATGATTGCCATGCATGACCTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR TCA 90 bp GCTTTCTTATTGATATGGGATCCCAGGCAAACATTCACCAGATTGGTCAGCTGCAAACCACTAGGTGACTaGGGTGTGGACTTGGCACCT +
Preference number: 4 (lower is better)
Translates to: AFLLIWDPRQTFTRLVSCKPLGD*GVDLAP
Trigger: AGGTGCCAAGTCCACACCTCAGTCACCTAGTGGTTT...GCAGCTGACCAATCTGGTGAATGTTTGCCTGGGATCCCATATCAATAAGAAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
CDS-3UTR TCA 90 bp ACCACTCTTTCTGCCAACCCATACAGCGTATCCCCAGATGTCAAAACCACTAGGATTCCCTGTGCTCTTTaGTCCACCGTTCCATGTCAT +
Preference number: 4 (lower is better)
Translates to: TTLSANPYSVSPDVKTTRIPCAL*STVPCH
Trigger: ATGACATGGAACGGTGGATCAAAGAGCACAGGGAAT...CCTAGTGGTTTTGACATCTGGGGATACGCTGTATGGGTTGGCAGAAAGAGTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
CDS-3UTR GCA 90 bp GGGGCTGAAAAACGATCAAGCTACAGGTTCACATATGGGACAAACTGTAACAGTTGCAGTGAGTGGAGATaGGCCACTGTACTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: GAEKRSSYRFTYGTNCNSCSEWR*ATVLQP
Trigger: AGGCTGGAGTACAGTGGCGCATCTCCACTCACTGCA...ACTGTTACAGTTTGTCCCATATGTGAACCTGTAGCTTGATCGTTTTTCAGCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458707.1
CDS-3UTR GCA 90 bp GCTTTCTTATTGATATGGGATCCCAGGCAAACATTCACCAGATTGGTCAGCTGCCCCTGTGTATTCAAATaGCTTTCCAGGGACCCGGAG +
Preference number: 4 (lower is better)
Translates to: AFLLIWDPRQTFTRLVSCPCVFK*LSRDPE
Trigger: CTCCGGGTCCCTGGAAAGGCATTTGAATACACAGGG...GCAGCTGACCAATCTGGTGAATGTTTGCCTGGGATCCCATATCAATAAGAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649152.1
CDS-3UTR CCA 90 bp ATTCACCCTCACATTATGCTTATTAAGAACCAAGCTCAGAGGGTAGAAAAGTGCGGAAGCCATAGTGGGTaGTCACGTGGAGGAGCCGAC +
Preference number: 4 (lower is better)
Translates to: IHPHIMLIKNQAQRVEKCGSHSG*SRGGAD
Trigger: GTCGGCTCCTCCACGTGACCACCCACTATGGCTTCC...GCACTTTTCTACCCTCTGAGCTTGGTTCTTAATAAGCATAATGTGAGGGTGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544910.5
CDS-3UTR TCA 90 bp CTGTTGATGTTACAGGTCATGCATGGCAATCATTGGACCAATGCCACACAAGCTTGGCACCAAGATCACTaGGGCTTTCTTGAGGGCTTT +
Preference number: 4 (lower is better)
Translates to: LLMLQVMHGNHWTNATQAWHQDH*GFLEGF
Trigger: AAAGCCCTCAAGAAAGCCTCAGTGATCTTGGTGCCA...AGCTTGTGTGGCATTGGTCCAATGATTGCCATGCATGACCTGTAACATCAACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR TCA 90 bp TTGGACCAATGCCACACAAGCTTAGATGTCCTCCACTCTCCAGTCAGAAAGAACGCATCCAGATGTGGCTaGAGGAACTCAAACTGTTCA +
Preference number: 4 (lower is better)
Translates to: LDQCHTSLDVLHSPVRKNASRCG*RNSNCS
Trigger: TGAACAGTTTGAGTTCCTTCAGCCACATCTGGATGC...GTTCTTTCTGACTGGAGAGTGGAGGACATCTAAGCTTGTGTGGCATTGGTCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR GCA 90 bp CTGTTGATGTTACAGGTCATGCATGGCAATCATTGGACCAATGCCACACAAGCTGGCTACCACTCTTTCTaGCAACCCATACAGCGTATC +
Preference number: 4 (lower is better)
Translates to: LLMLQVMHGNHWTNATQAGYHSF*QPIQRI
Trigger: GATACGCTGTATGGGTTGGCAGAAAGAGTGGTAGCC...AGCTTGTGTGGCATTGGTCCAATGATTGCCATGCATGACCTGTAACATCAACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CCA 90 bp TACAGGTCATGCATGGCAATCATTGGACCAATGCCACACAAGCTTAGATGTCCTAGCTTGAGGGTCACTTaGCTGTTCTCGAAGTTCCCT +
Preference number: 4 (lower is better)
Translates to: YRSCMAIIGPMPHKLRCPSLRVT*LFSKFP
Trigger: AGGGAACTTCGAGAACAGCCAAGTGACCCTCAAGCT...AGGACATCTAAGCTTGTGTGGCATTGGTCCAATGATTGCCATGCATGACCTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR TCA 90 bp CATATTCTGAAAGTGCTTCACATTACACTGTGCATTTACAGACATCGCAGGGACTGCATATCGAAATCCTaGGGAGGGTACCCTGCCTCA +
Preference number: 4 (lower is better)
Translates to: HILKVLHITLCIYRHRRDCISKS*GGYPAS
Trigger: TGAGGCAGGGTACCCTCCTCAGGATTTCGATATGCA...GTCCCTGCGATGTCTGTAAATGCACAGTGTAATGTGAAGCACTTTCAGAATATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR TCA 90 bp AGCAATTGTTTCCTTATCACCTCCATGCTTGATCACATGCCATTCTGTGCCATCTGGCACCAAGATCACTaGGGCTTTCTTGAGGGCTTT +
Preference number: 4 (lower is better)
Translates to: SNCFLITSMLDHMPFCAIWHQDH*GFLEGF
Trigger: AAAGCCCTCAAGAAAGCCTCAGTGATCTTGGTGCCA...GATGGCACAGAATGGCATGTGATCAAGCATGGAGGTGATAAGGAAACAATTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR TCA 90 bp CAGGGCACGACCCTCATTACTGCATTTCTTGACATTGGCATATCCTTCTACAATAGCTCTTGTTCAGCTTaGGGGTCACTTGGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: QGTTLITAFLDIGISFYNSSCSA*GSLGCS
Trigger: AGAACAGCCAAGTGACCCTCAAGCTGAACAAGAGCT...ATTGTAGAAGGATATGCCAATGTCAAGAAATGCAGTAATGAGGGTCGTGCCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649152.1
CDS-3UTR TCA 90 bp ACCACTCTTTCTGCCAACCCATACAGCGTATCCCCAGATGTCAAAACCACTAGGAAGACCTGTCTGCAATaGGGTAACTCTTTCAAGTTC +
Preference number: 4 (lower is better)
Translates to: TTLSANPYSVSPDVKTTRKTCLQ*GNSFKF
Trigger: GAACTTGAAAGAGTTACCTCATTGCAGACAGGTCTT...CCTAGTGGTTTTGACATCTGGGGATACGCTGTATGGGTTGGCAGAAAGAGTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
CDS-3UTR TCA 90 bp CCCGAGAAACACTTTTCACAGGACCATCTCCTGTCTGCTCATCCACATAGTCTCTGTGAATGGCTTGGGTaGAGTGCATATGAAGTTGAT +
Preference number: 4 (lower is better)
Translates to: PEKHFSQDHLLSAHPHSLCEWLG*SAYEVD
Trigger: ATCAACTTCATATGCACTTCACCCAAGCCATTCACA...GAGACTATGTGGATGAGCAGACAGGAGATGGTCCTGTGAAAAGTGTTTCTCGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
CDS-3UTR TCA 90 bp TACAGGTCATGCATGGCAATCATTGGACCAATGCCACACAAGCTTAGATGTCCTACTCCCTTCAGAAGCTaGAGCAGTATCCTCATTGTC +
Preference number: 4 (lower is better)
Translates to: YRSCMAIIGPMPHKLRCPTPFRS*SSILIV
Trigger: GACAATGAGGATACTGCTTCAGCTTCTGAAGGGAGT...AGGACATCTAAGCTTGTGTGGCATTGGTCCAATGATTGCCATGCATGACCTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR TCA 90 bp ACCACTCTTTCTGCCAACCCATACAGCGTATCCCCAGATGTCAAAACCACTAGGTCTTTGTGGTTGGCCTaGATTTCAAATGGATTCCCA +
Preference number: 4 (lower is better)
Translates to: TTLSANPYSVSPDVKTTRSLWLA*ISNGFP
Trigger: TGGGAATCCATTTGAAATTCAGGCCAACCACAAAGA...CCTAGTGGTTTTGACATCTGGGGATACGCTGTATGGGTTGGCAGAAAGAGTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
CDS-3UTR TCA 90 bp GTTCACTGGCGGTTGAGACTGAGAATAGAACTGCTGAAGAAAGGGCTTTTTGACCCACATAGTCTCGTTTaGGTTCCTCAGGAACATCAC +
Preference number: 4 (lower is better)
Translates to: VHWRLRLRIELLKKGLFDPHSLV*VPQEHH
Trigger: GTGATGTTCCTGAGGAACTCAAACGAGACTATGTGG...GTCAAAAAGCCCTTTCTTCAGCAGTTCTATTCTCAGTCTCAACCGCCAGTGAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441602.5
CDS-3UTR TCA 90 bp CTGTTGATGTTACAGGTCATGCATGGCAATCATTGGACCAATGCCACACAAGCTCCACATAGTCTCGTTTaGGTTCCTCAGGAACATCAC +
Preference number: 4 (lower is better)
Translates to: LLMLQVMHGNHWTNATQAPHSLV*VPQEHH
Trigger: GTGATGTTCCTGAGGAACTCAAACGAGACTATGTGG...AGCTTGTGTGGCATTGGTCCAATGATTGCCATGCATGACCTGTAACATCAACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR TCA 90 bp GCCAATCGTATACAATGTTCCCAAAGTATATTAGACACAGGCAAGGGTATGCGAAAACCACTAGGTGACTaGGGTGTGGACTTGGCACCT +
Preference number: 4 (lower is better)
Translates to: ANRIQCSQSILDTGKGMRKPLGD*GVDLAP
Trigger: AGGTGCCAAGTCCACACCTCAGTCACCTAGTGGTTT...TCGCATACCCTTGCCTGTGTCTAATATACTTTGGGAACATTGTATACGATTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
CDS-3UTR TCA 90 bp TACAGGTCATGCATGGCAATCATTGGACCAATGCCACACAAGCTTAGATGTCCTGGTCAGCTGCTTCGTTaGATATTCCCTGTGCTCTTT +
Preference number: 4 (lower is better)
Translates to: YRSCMAIIGPMPHKLRCPGQLLR*IFPVLF
Trigger: AAAGAGCACAGGGAATATTCAACGAAGCAGCTGACC...AGGACATCTAAGCTTGTGTGGCATTGGTCCAATGATTGCCATGCATGACCTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR TCA 90 bp CAAGCTGGAACTGCAGGAGTCAGAAACGGGGCTGAAAAACGATCAAGCTACAGGGCAGCTCAAAACATTTaGCATCTCAAAACGTCTGTT +
Preference number: 4 (lower is better)
Translates to: QAGTAGVRNGAEKRSSYRAAQNI*HLKTSV
Trigger: AACAGACGTTTTGAGATGTCAAATGTTTTGAGCTGC...CCTGTAGCTTGATCGTTTTTCAGCCCCGTTTCTGACTCCTGCAGTTCCAGCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000458707.1
CDS-3UTR GCA 90 bp TCCTTAGGATTCTGTGAGCTGTTGATGTTACAGGTCATGCATGGCAATCATTGGCTTCCCATAGTGCTTTaGACAGGTCTGCAAGGCATG +
Preference number: 4 (lower is better)
Translates to: SLGFCELLMLQVMHGNHWLPIVL*TGLQGM
Trigger: CATGCCTTGCAGACCTGTGCAAAGCACTATGGGAAG...CCAATGATTGCCATGCATGACCTGTAACATCAACAGCTCACAGAATCCTAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR GCA 90 bp AGCAATTGTTTCCTTATCACCTCCATGCTTGATCACATGCCATTCTGTGCCATCGGCTACCACTCTTTCTaGCAACCCATACAGCGTATC +
Preference number: 4 (lower is better)
Translates to: SNCFLITSMLDHMPFCAIGYHSF*QPIQRI
Trigger: GATACGCTGTATGGGTTGGCAGAAAGAGTGGTAGCC...GATGGCACAGAATGGCATGTGATCAAGCATGGAGGTGATAAGGAAACAATTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CCA 90 bp GCTTTCTTATTGATATGGGATCCCAGGCAAACATTCACCAGATTGGTCAGCTGCCAGGTCTGCAAGGCATaGAATATAGCTGTCTGGTGT +
Preference number: 4 (lower is better)
Translates to: AFLLIWDPRQTFTRLVSCQVCKA*NIAVWC
Trigger: ACACCAGACAGCTATATTCCATGCCTTGCAGACCTG...GCAGCTGACCAATCTGGTGAATGTTTGCCTGGGATCCCATATCAATAAGAAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
CDS-3UTR CCA 90 bp TACAGGTCATGCATGGCAATCATTGGACCAATGCCACACAAGCTTAGATGTCCTCAGGTCTGCAAGGCATaGAATATAGCTGTCTGGTGT +
Preference number: 4 (lower is better)
Translates to: YRSCMAIIGPMPHKLRCPQVCKA*NIAVWC
Trigger: ACACCAGACAGCTATATTCCATGCCTTGCAGACCTG...AGGACATCTAAGCTTGTGTGGCATTGGTCCAATGATTGCCATGCATGACCTGTA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CCA 90 bp CATCACAGCATCCAGATGTGGCTGAAGGAACTCAAACTGTTCAGCCAAGAATACCAGGTCTGCAAGGCATaGAATATAGCTGTCTGGTGT +
Preference number: 4 (lower is better)
Translates to: HHSIQMWLKELKLFSQEYQVCKA*NIAVWC
Trigger: ACACCAGACAGCTATATTCCATGCCTTGCAGACCTG...GTATTCTTGGCTGAACAGTTTGAGTTCCTTCAGCCACATCTGGATGCTGTGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
CDS-3UTR CCA 90 bp TACAGGTCATGCATGGCAATCATTGGACCAATGCCACACAAGCTTAGATGTCCTACTGAGGTGTGGACTTaGCACCTTCTCCTTTCTTTC +
Preference number: 4 (lower is better)
Translates to: YRSCMAIIGPMPHKLRCPTEVWT*HLLLSF
Trigger: GAAAGAAAGGAGAAGGTGCCAAGTCCACACCTCAGT...AGGACATCTAAGCTTGTGTGGCATTGGTCCAATGATTGCCATGCATGACCTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR TCA 90 bp CTCTCCAGTCAGAAAGAACACACACAAAATTCCTTATCAGACAGTTGGCAAGAGTCACTGAGGCTTTCTTaGGGGCTTTTCAGACCCTGT +
Preference number: 4 (lower is better)
Translates to: LSSQKEHTQNSLSDSWQESLRLS*GLFRPC
Trigger: ACAGGGTCTGAAAAGCCCTCAAGAAAGCCTCAGTGA...CTCTTGCCAACTGTCTGATAAGGAATTTTGTGTGTGTTCTTTCTGACTGGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR TCA 90 bp TGCAGATTTTGGAAAGAGCTACGTCCAGCTGTTCCTCAATCTGTTCCAAAGTATTCACTGAGGCTTTCTTaGGGGCTTTTCAGACCCTGT +
Preference number: 4 (lower is better)
Translates to: CRFWKELRPAVPQSVPKYSLRLS*GLFRPC
Trigger: ACAGGGTCTGAAAAGCCCTCAAGAAAGCCTCAGTGA...ATACTTTGGAACAGATTGAGGAACAGCTGGACGTAGCTCTTTCCAAAATCTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
CDS-3UTR TCA 90 bp TTCTTGCAGATTTTGGAAAGAGCTACGTCCAGCTGTTCCTCAATCTGTTCCAAATCACTGAGGCTTTCTTaGGGGCTTTTCAGACCCTGT +
Preference number: 4 (lower is better)
Translates to: FLQILERATSSCSSICSKSLRLS*GLFRPC
Trigger: ACAGGGTCTGAAAAGCCCTCAAGAAAGCCTCAGTGA...TTTGGAACAGATTGAGGAACAGCTGGACGTAGCTCTTTCCAAAATCTGCAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
CDS-3UTR TCA 90 bp CTACAGTACTGCTCAAACAAGGTCACTGTTTTTGAAGAAGTTGAGACTGGCTGTTGGCACCAAGATCACTaGGGCTTTCTTGAGGGCTTT +
Preference number: 4 (lower is better)
Translates to: LQYCSNKVTVFEEVETGCWHQDH*GFLEGF
Trigger: AAAGCCCTCAAGAAAGCCTCAGTGATCTTGGTGCCA...ACAGCCAGTCTCAACTTCTTCAAAAACAGTGACCTTGTTTGAGCAGTACTGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
CDS-3UTR TCA 90 bp AACGGGGCTGAAAAACGATCAAGCTACAGGTTCACATATGGGACAAACTGTAACACTCCCTTCAGAAGCTaGAGCAGTATCCTCATTGTC +
Preference number: 4 (lower is better)
Translates to: NGAEKRSSYRFTYGTNCNTPFRS*SSILIV
Trigger: GACAATGAGGATACTGCTTCAGCTTCTGAAGGGAGT...GTTACAGTTTGTCCCATATGTGAACCTGTAGCTTGATCGTTTTTCAGCCCCGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458707.1
CDS-3UTR TCA 90 bp AGCAATTGTTTCCTTATCACCTCCATGCTTGATCACATGCCATTCTGTGCCATCACTCCCTTCAGAAGCTaGAGCAGTATCCTCATTGTC +
Preference number: 4 (lower is better)
Translates to: SNCFLITSMLDHMPFCAITPFRS*SSILIV
Trigger: GACAATGAGGATACTGCTTCAGCTTCTGAAGGGAGT...GATGGCACAGAATGGCATGTGATCAAGCATGGAGGTGATAAGGAAACAATTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR TCA 90 bp AGCAATTGTTTCCTTATCACCTCCATGCTTGATCACATGCCATTCTGTGCCATCCCACATAGTCTCGTTTaGGTTCCTCAGGAACATCAC +
Preference number: 4 (lower is better)
Translates to: SNCFLITSMLDHMPFCAIPHSLV*VPQEHH
Trigger: GTGATGTTCCTGAGGAACTCAAACGAGACTATGTGG...GATGGCACAGAATGGCATGTGATCAAGCATGGAGGTGATAAGGAAACAATTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR TCA 90 bp GGGGCTGAAAAACGATCAAGCTACAGGTTCACATATGGGACAAACTGTAACAGTCCACATAGTCTCGTTTaGGTTCCTCAGGAACATCAC +
Preference number: 4 (lower is better)
Translates to: GAEKRSSYRFTYGTNCNSPHSLV*VPQEHH
Trigger: GTGATGTTCCTGAGGAACTCAAACGAGACTATGTGG...ACTGTTACAGTTTGTCCCATATGTGAACCTGTAGCTTGATCGTTTTTCAGCCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458707.1
CDS-3UTR TCA 90 bp ATTCACCCTCACATTATGCTTATTAAGAACCAAGCTCAGAGGGTAGAAAAGTGCGTCAAAACCACTAGGTaGCTGAGGTGTGGACTTGGC +
Preference number: 4 (lower is better)
Translates to: IHPHIMLIKNQAQRVEKCVKTTR*LRCGLG
Trigger: GCCAAGTCCACACCTCAGTCACCTAGTGGTTTTGAC...GCACTTTTCTACCCTCTGAGCTTGGTTCTTAATAAGCATAATGTGAGGGTGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000305866.10
ENST00000441602.5
ENST00000544910.5
ENST00000649152.1
CDS-3UTR TCA 90 bp ACATTCAAGGCACAACTGAATAGCTCCTGGATAATCTTCCTCCTCCAGCATTTCATTCCCTGTGCTCTTTaGTCCACCGTTCCATGTCAT +
Preference number: 4 (lower is better)
Translates to: TFKAQLNSSWIIFLLQHFIPCAL*STVPCH
Trigger: ATGACATGGAACGGTGGATCAAAGAGCACAGGGAAT...GAAATGCTGGAGGAGGAAGATTATCCAGGAGCTATTCAGTTGTGCCTTGAATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
CDS-3UTR TCA 90 bp CTTTTGTATCAATTCCTATTACCTTGGAAAACACTGGGCTCTACCAGGCAGGTGCAGACAACTGTTTCCTaGGTCAGTCAACCTGGGTTT +
Preference number: 4 (lower is better)
Translates to: LLYQFLLPWKTLGSTRQVQTTVS*VSQPGF
Trigger: AAACCCAGGTTGACTGACTCAGGAAACAGTTGTCTG...CACCTGCCTGGTAGAGCCCAGTGTTTTCCAAGGTAATAGGAATTGATACAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR TCA 90 bp CTTGATCACATGCCATTCTGTGCCATCCATTTTATCACCTTAGGTCCCAGAAGACAGACAACTGTTTCCTaGGTCAGTCAACCTGGGTTT +
Preference number: 4 (lower is better)
Translates to: LDHMPFCAIHFITLGPRRQTTVS*VSQPGF
Trigger: AAACCCAGGTTGACTGACTCAGGAAACAGTTGTCTG...TCTTCTGGGACCTAAGGTGATAAAATGGATGGCACAGAATGGCATGTGATCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR TCA 90 bp TACAGGTCATGCATGGCAATCATTGGACCAATGCCACACAAGCTTAGATGTCCTGATTCTGTGAGCTGTTaGTGTTACAGGTCATGCATG +
Preference number: 4 (lower is better)
Translates to: YRSCMAIIGPMPHKLRCPDSVSC*CYRSCM
Trigger: CATGCATGACCTGTAACATCAACAGCTCACAGAATC...AGGACATCTAAGCTTGTGTGGCATTGGTCCAATGATTGCCATGCATGACCTGTA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR TCA 90 bp AGCAATTGTTTCCTTATCACCTCCATGCTTGATCACATGCCATTCTGTGCCATCTATCACCTCCATGCTTaGTCACATGCCATTCTGTGC +
Preference number: 4 (lower is better)
Translates to: SNCFLITSMLDHMPFCAIYHLHA*SHAILC
Trigger: GCACAGAATGGCATGTGATCAAGCATGGAGGTGATA...GATGGCACAGAATGGCATGTGATCAAGCATGGAGGTGATAAGGAAACAATTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR TCA 90 bp GGGGCTGAAAAACGATCAAGCTACAGGTTCACATATGGGACAAACTGTAACAGTAGTCAGAAACGGGGCTaGAAAACGATCAAGCTACAG +
Preference number: 4 (lower is better)
Translates to: GAEKRSSYRFTYGTNCNSSQKRG*KTIKLQ
Trigger: CTGTAGCTTGATCGTTTTTCAGCCCCGTTTCTGACT...ACTGTTACAGTTTGTCCCATATGTGAACCTGTAGCTTGATCGTTTTTCAGCCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000458707.1
CDS-3UTR GCA 90 bp AGCAATTGTTTCCTTATCACCTCCATGCTTGATCACATGCCATTCTGTGCCATCCTGAGGAGGGTACCCTaGCTCAAAGAGCTAACAAAT +
Preference number: 4 (lower is better)
Translates to: SNCFLITSMLDHMPFCAILRRVP*LKELTN
Trigger: ATTTGTTAGCTCTTTGAGGCAGGGTACCCTCCTCAG...GATGGCACAGAATGGCATGTGATCAAGCATGGAGGTGATAAGGAAACAATTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR GCA 90 bp ACCACTCTTTCTGCCAACCCATACAGCGTATCCCCAGATGTCAAAACCACTAGGTACGCCTCTAATTCTTaGAAATTGAGAACAGGTGGA +
Preference number: 4 (lower is better)
Translates to: TTLSANPYSVSPDVKTTRYASNS*KLRTGG
Trigger: TCCACCTGTTCTCAATTTGCAAGAATTAGAGGCGTA...CCTAGTGGTTTTGACATCTGGGGATACGCTGTATGGGTTGGCAGAAAGAGTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
CDS-3UTR GCA 90 bp GATCAAGCTACAGGTTCACATATGGGACAAACTGTAACAGTCTGCATTCCCCACTGCTTTGCACAGGTCTaGAAGGCATGGAATATAGCT +
Preference number: 4 (lower is better)
Translates to: DQATGSHMGQTVTVCIPHCFAQV*KAWNIA
Trigger: AGCTATATTCCATGCCTTGCAGACCTGTGCAAAGCA...GTGGGGAATGCAGACTGTTACAGTTTGTCCCATATGTGAACCTGTAGCTTGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458707.1
CDS-3UTR GCA 90 bp CTCTCCAGTCAGAAAGAACACACACAAAATTCCTTATCAGACAGTTGGCAAGAGCTTCCCATAGTGCTTTaGACAGGTCTGCAAGGCATG +
Preference number: 4 (lower is better)
Translates to: LSSQKEHTQNSLSDSWQELPIVL*TGLQGM
Trigger: CATGCCTTGCAGACCTGTGCAAAGCACTATGGGAAG...CTCTTGCCAACTGTCTGATAAGGAATTTTGTGTGTGTTCTTTCTGACTGGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR GCA 90 bp TTTCTTATTGATATGGGATCCCAGGCAAACATTCACCAGATTGGTCAGCTGCTTCTTCCCATAGTGCTTTaGACAGGTCTGCAAGGCATG +
Preference number: 4 (lower is better)
Translates to: FLIDMGSQANIHQIGQLLLPIVL*TGLQGM
Trigger: CATGCCTTGCAGACCTGTGCAAAGCACTATGGGAAG...AAGCAGCTGACCAATCTGGTGAATGTTTGCCTGGGATCCCATATCAATAAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
CDS-3UTR GCA 90 bp GATCAAGCTACAGGTTCACATATGGGACAAACTGTAACAGTCTGCATTCCCCACCCACCACTACAGTACTaGTCAAACAAGGTCACTGTT +
Preference number: 4 (lower is better)
Translates to: DQATGSHMGQTVTVCIPHPPLQY*SNKVTV
Trigger: AACAGTGACCTTGTTTGAGCAGTACTGTAGTGGTGG...GTGGGGAATGCAGACTGTTACAGTTTGTCCCATATGTGAACCTGTAGCTTGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458707.1
CDS-3UTR GCA 90 bp CTGTTGATGTTACAGGTCATGCATGGCAATCATTGGACCAATGCCACACAAGCTACCAGATTGGTCAGCTaGTTCGTTGAATATTCCCTG +
Preference number: 4 (lower is better)
Translates to: LLMLQVMHGNHWTNATQATRLVS*FVEYSL
Trigger: CAGGGAATATTCAACGAAGCAGCTGACCAATCTGGT...AGCTTGTGTGGCATTGGTCCAATGATTGCCATGCATGACCTGTAACATCAACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR GCA 90 bp TTGGACCAATGCCACACAAGCTTAGATGTCCTCCACTCTCCAGTCAGAAAGAACCAATCATTGGACCAATaGCACACAAGCTTAGATGTC +
Preference number: 4 (lower is better)
Translates to: LDQCHTSLDVLHSPVRKNQSLDQ*HTSLDV
Trigger: GACATCTAAGCTTGTGTGGCATTGGTCCAATGATTG...GTTCTTTCTGACTGGAGAGTGGAGGACATCTAAGCTTGTGTGGCATTGGTCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CCA 90 bp TTGTCTCTATACGCCTCTAATTCTTGCAAATTGAGAACAGGTGGAAGCTTCTCCAGCTTGAGGGTCACTTaGCTGTTCTCGAAGTTCCCT +
Preference number: 4 (lower is better)
Translates to: LSLYASNSCKLRTGGSFSSLRVT*LFSKFP
Trigger: AGGGAACTTCGAGAACAGCCAAGTGACCCTCAAGCT...GGAGAAGCTTCCACCTGTTCTCAATTTGCAAGAATTAGAGGCGTATAGAGACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436177.5
ENST00000438395.5
ENST00000649152.1
CDS-3UTR CCA 90 bp AACGGGGCTGAAAAACGATCAAGCTACAGGTTCACATATGGGACAAACTGTAACCAGGTCTGCAAGGCATaGAATATAGCTGTCTGGTGT +
Preference number: 4 (lower is better)
Translates to: NGAEKRSSYRFTYGTNCNQVCKA*NIAVWC
Trigger: ACACCAGACAGCTATATTCCATGCCTTGCAGACCTG...GTTACAGTTTGTCCCATATGTGAACCTGTAGCTTGATCGTTTTTCAGCCCCGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458707.1
CDS-3UTR CCA 90 bp CAGGGCACGACCCTCATTACTGCATTTCTTGACATTGGCATATCCTTCTACAATACTGAGGTGTGGACTTaGCACCTTCTCCTTTCTTTC +
Preference number: 4 (lower is better)
Translates to: QGTTLITAFLDIGISFYNTEVWT*HLLLSF
Trigger: GAAAGAAAGGAGAAGGTGCCAAGTCCACACCTCAGT...ATTGTAGAAGGATATGCCAATGTCAAGAAATGCAGTAATGAGGGTCGTGCCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
CDS-3UTR CCA 90 bp CTTTTGTATCAATTCCTATTACCTTGGAAAACACTGGGCTCTACCAGGCAGGTGACTGAGGTGTGGACTTaGCACCTTCTCCTTTCTTTC +
Preference number: 4 (lower is better)
Translates to: LLYQFLLPWKTLGSTRQVTEVWT*HLLLSF
Trigger: GAAAGAAAGGAGAAGGTGCCAAGTCCACACCTCAGT...CACCTGCCTGGTAGAGCCCAGTGTTTTCCAAGGTAATAGGAATTGATACAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CCA 90 bp CAGGGCACGACCCTCATTACTGCATTTCTTGACATTGGCATATCCTTCTACAATATACCAAGGATTCCGTaGCTACCACTCTTTCTGCCA +
Preference number: 4 (lower is better)
Translates to: QGTTLITAFLDIGISFYNIPRIP*LPLFLP
Trigger: TGGCAGAAAGAGTGGTAGCCACGGAATCCTTGGTAT...ATTGTAGAAGGATATGCCAATGTCAAGAAATGCAGTAATGAGGGTCGTGCCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
CDS-3UTR CCA 90 bp AGCAATTGTTTCCTTATCACCTCCATGCTTGATCACATGCCATTCTGTGCCATCATACCAAGGATTCCGTaGCTACCACTCTTTCTGCCA +
Preference number: 4 (lower is better)
Translates to: SNCFLITSMLDHMPFCAIIPRIP*LPLFLP
Trigger: TGGCAGAAAGAGTGGTAGCCACGGAATCCTTGGTAT...GATGGCACAGAATGGCATGTGATCAAGCATGGAGGTGATAAGGAAACAATTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CCA 90 bp CAGGGCACGACCCTCATTACTGCATTTCTTGACATTGGCATATCCTTCTACAATCACAGCATCCAGATGTaGCTGAAGGAACTCAAACTG +
Preference number: 4 (lower is better)
Translates to: QGTTLITAFLDIGISFYNHSIQM*LKELKL
Trigger: CAGTTTGAGTTCCTTCAGCCACATCTGGATGCTGTG...ATTGTAGAAGGATATGCCAATGTCAAGAAATGCAGTAATGAGGGTCGTGCCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
CDS-3UTR CCA 90 bp AGTAGCAATTGTTTCCTTATCACCTCCATGCTTGATCACATGCCATTCTGTGCCCACAGCATCCAGATGTaGCTGAAGGAACTCAAACTG +
Preference number: 4 (lower is better)
Translates to: SSNCFLITSMLDHMPFCAHSIQM*LKELKL
Trigger: CAGTTTGAGTTCCTTCAGCCACATCTGGATGCTGTG...GGCACAGAATGGCATGTGATCAAGCATGGAGGTGATAAGGAAACAATTGCTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CCA 90 bp GATCAAGCTACAGGTTCACATATGGGACAAACTGTAACAGTCTGCATTCCCCACAAAGAAATGATAAGCTaGGAGCGGTGGTTCATGCCT +
Preference number: 4 (lower is better)
Translates to: DQATGSHMGQTVTVCIPHKEMIS*ERWFMP
Trigger: AGGCATGAACCACCGCTCCCAGCTTATCATTTCTTT...GTGGGGAATGCAGACTGTTACAGTTTGTCCCATATGTGAACCTGTAGCTTGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458707.1
CDS-3UTR TCA 90 bp GCCTCTAATTCTTGCAAATTGAGAACAGGTGGAAGCTTCTCCAGCTCATATTTATCACTGAGGCTTTCTTaGGGGCTTTTCAGACCCTGT +
Preference number: 4 (lower is better)
Translates to: ASNSCKLRTGGSFSSSYLSLRLS*GLFRPC
Trigger: ACAGGGTCTGAAAAGCCCTCAAGAAAGCCTCAGTGA...TAAATATGAGCTGGAGAAGCTTCCACCTGTTCTCAATTTGCAAGAATTAGAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000436177.5
ENST00000438395.5
ENST00000649152.1
CDS-3UTR TCA 90 bp GCCTCTAATTCTTGCAAATTGAGAACAGGTGGAAGCTTCTCCAGCTCATATTTATGGCACCAAGATCACTaGGGCTTTCTTGAGGGCTTT +
Preference number: 4 (lower is better)
Translates to: ASNSCKLRTGGSFSSSYLWHQDH*GFLEGF
Trigger: AAAGCCCTCAAGAAAGCCTCAGTGATCTTGGTGCCA...TAAATATGAGCTGGAGAAGCTTCCACCTGTTCTCAATTTGCAAGAATTAGAGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436177.5
ENST00000438395.5
ENST00000649152.1
CDS-3UTR TCA 90 bp GCCTCTAATTCTTGCAAATTGAGAACAGGTGGAAGCTTCTCCAGCTCATATTTAAGCTCTTGTTCAGCTTaGGGGTCACTTGGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: ASNSCKLRTGGSFSSSYLSSCSA*GSLGCS
Trigger: AGAACAGCCAAGTGACCCTCAAGCTGAACAAGAGCT...TAAATATGAGCTGGAGAAGCTTCCACCTGTTCTCAATTTGCAAGAATTAGAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436177.5
ENST00000438395.5
ENST00000649152.1
CDS-3UTR TCA 90 bp CTGTTGATGTTACAGGTCATGCATGGCAATCATTGGACCAATGCCACACAAGCTAGGCCTAAACTAGCTTaGGTAAAACCTTCCTTTGCA +
Preference number: 4 (lower is better)
Translates to: LLMLQVMHGNHWTNATQARPKLA*VKPSFA
Trigger: TGCAAAGGAAGGTTTTACTCAAGCTAGTTTAGGCCT...AGCTTGTGTGGCATTGGTCCAATGATTGCCATGCATGACCTGTAACATCAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR TCA 90 bp CTACTTAGAATCAAGCTGGAACTGCAGGAGTCAGAAACGGGGCTGAAAAACGATTGTGAATGGCTTGGGTaGAGTGCATATGAAGTTGAT +
Preference number: 4 (lower is better)
Translates to: LLRIKLELQESETGLKNDCEWLG*SAYEVD
Trigger: ATCAACTTCATATGCACTTCACCCAAGCCATTCACA...ATCGTTTTTCAGCCCCGTTTCTGACTCCTGCAGTTCCAGCTTGATTCTAAGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458707.1
CDS-3UTR TCA 90 bp TTCTTGCAGATTTTGGAAAGAGCTACGTCCAGCTGTTCCTCAATCTGTTCCAAAACTCCCTTCAGAAGCTaGAGCAGTATCCTCATTGTC +
Preference number: 4 (lower is better)
Translates to: FLQILERATSSCSSICSKTPFRS*SSILIV
Trigger: GACAATGAGGATACTGCTTCAGCTTCTGAAGGGAGT...TTTGGAACAGATTGAGGAACAGCTGGACGTAGCTCTTTCCAAAATCTGCAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
CDS-3UTR TCA 90 bp CCATTTCACATTAGCCATGAGAAGCAGCATCTGTTCATAATCAAGGGCTTTACCACTCCCTTCAGAAGCTaGAGCAGTATCCTCATTGTC +
Preference number: 4 (lower is better)
Translates to: PFHISHEKQHLFIIKGFTTPFRS*SSILIV
Trigger: GACAATGAGGATACTGCTTCAGCTTCTGAAGGGAGT...GGTAAAGCCCTTGATTATGAACAGATGCTGCTTCTCATGGCTAATGTGAAATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
CDS-3UTR TCA 90 bp CCCGAGAAACACTTTTCACAGGACCATCTCCTGTCTGCTCATCCACATAGTCTCCAAGATGCTGAAATTTaGCTTAACAGGACAAAGTTC +
Preference number: 4 (lower is better)
Translates to: PEKHFSQDHLLSAHPHSLQDAEI*LNRTKF
Trigger: GAACTTTGTCCTGTTAAGTCAAATTTCAGCATCTTG...GAGACTATGTGGATGAGCAGACAGGAGATGGTCCTGTGAAAAGTGTTTCTCGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
CDS-3UTR TCA 90 bp CTGTTGATGTTACAGGTCATGCATGGCAATCATTGGACCAATGCCACACAAGCTTCTTTGTGGTTGGCCTaGATTTCAAATGGATTCCCA +
Preference number: 4 (lower is better)
Translates to: LLMLQVMHGNHWTNATQASLWLA*ISNGFP
Trigger: TGGGAATCCATTTGAAATTCAGGCCAACCACAAAGA...AGCTTGTGTGGCATTGGTCCAATGATTGCCATGCATGACCTGTAACATCAACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR TCA 90 bp GATCAAGCTACAGGTTCACATATGGGACAAACTGTAACAGTCTGCATTCCCCACTCTTTGTGGTTGGCCTaGATTTCAAATGGATTCCCA +
Preference number: 4 (lower is better)
Translates to: DQATGSHMGQTVTVCIPHSLWLA*ISNGFP
Trigger: TGGGAATCCATTTGAAATTCAGGCCAACCACAAAGA...GTGGGGAATGCAGACTGTTACAGTTTGTCCCATATGTGAACCTGTAGCTTGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458707.1
CDS-3UTR TCA 90 bp CTCTCCAGTCAGAAAGAACACACACAAAATTCCTTATCAGACAGTTGGCAAGAGGCATCCAGATGTGGCTaGAGGAACTCAAACTGTTCA +
Preference number: 4 (lower is better)
Translates to: LSSQKEHTQNSLSDSWQEASRCG*RNSNCS
Trigger: TGAACAGTTTGAGTTCCTTCAGCCACATCTGGATGC...CTCTTGCCAACTGTCTGATAAGGAATTTTGTGTGTGTTCTTTCTGACTGGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR TCA 90 bp AGAGTAGCAATTGTTTCCTTATCACCTCCATGCTTGATCACATGCCATTCTGTGATTCCCTGTGCTCTTTaGTCCACCGTTCCATGTCAT +
Preference number: 4 (lower is better)
Translates to: RVAIVSLSPPCLITCHSVIPCAL*STVPCH
Trigger: ATGACATGGAACGGTGGATCAAAGAGCACAGGGAAT...CACAGAATGGCATGTGATCAAGCATGGAGGTGATAAGGAAACAATTGCTACTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR TCA 90 bp CTGTTGATGTTACAGGTCATGCATGGCAATCATTGGACCAATGCCACACAAGCTGTCTTGCTTTCTTATTaGTATGGGATCCCAGGCAAA +
Preference number: 4 (lower is better)
Translates to: LLMLQVMHGNHWTNATQAVLLSY*YGIPGK
Trigger: TTTGCCTGGGATCCCATATCAATAAGAAAGCAAGAC...AGCTTGTGTGGCATTGGTCCAATGATTGCCATGCATGACCTGTAACATCAACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR TCA 90 bp TCCTTAGGATTCTGTGAGCTGTTGATGTTACAGGTCATGCATGGCAATCATTGGCTGCACTATAGTTCATaGCATCTGCATGCCACACAA +
Preference number: 4 (lower is better)
Translates to: SLGFCELLMLQVMHGNHWLHYSS*HLHATQ
Trigger: TTGTGTGGCATGCAGATGTCATGAACTATAGTGCAG...CCAATGATTGCCATGCATGACCTGTAACATCAACAGCTCACAGAATCCTAAGGA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR TCA 90 bp AGTAGCAATTGTTTCCTTATCACCTCCATGCTTGATCACATGCCATTCTGTGCCCTGCACTATAGTTCATaGCATCTGCATGCCACACAA +
Preference number: 4 (lower is better)
Translates to: SSNCFLITSMLDHMPFCALHYSS*HLHATQ
Trigger: TTGTGTGGCATGCAGATGTCATGAACTATAGTGCAG...GGCACAGAATGGCATGTGATCAAGCATGGAGGTGATAAGGAAACAATTGCTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR TCA 90 bp ATTCACCCTCACATTATGCTTATTAAGAACCAAGCTCAGAGGGTAGAAAAGTGCAGACATCGCAGGGACTaGTGGACACAGAGTAGCAAT +
Preference number: 4 (lower is better)
Translates to: IHPHIMLIKNQAQRVEKCRHRRD*WTQSSN
Trigger: ATTGCTACTCTGTGTCCATCAGTCCCTGCGATGTCT...GCACTTTTCTACCCTCTGAGCTTGGTTCTTAATAAGCATAATGTGAGGGTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR TCA 90 bp TACAGGTCATGCATGGCAATCATTGGACCAATGCCACACAAGCTTAGATGTCCTTCCGACATGAGAGGATaGAAAGAAAACACTCAGCAT +
Preference number: 4 (lower is better)
Translates to: YRSCMAIIGPMPHKLRCPSDMRG*KENTQH
Trigger: ATGCTGAGTGTTTTCTTTTCATCCTCTCATGTCGGA...AGGACATCTAAGCTTGTGTGGCATTGGTCCAATGATTGCCATGCATGACCTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR GCA 90 bp TTGTCTCTATACGCCTCTAATTCTTGCAAATTGAGAACAGGTGGAAGCTTCTCCCTGAGGAGGGTACCCTaGCTCAAAGAGCTAACAAAT +
Preference number: 4 (lower is better)
Translates to: LSLYASNSCKLRTGGSFSLRRVP*LKELTN
Trigger: ATTTGTTAGCTCTTTGAGGCAGGGTACCCTCCTCAG...GGAGAAGCTTCCACCTGTTCTCAATTTGCAAGAATTAGAGGCGTATAGAGACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436177.5
ENST00000438395.5
ENST00000649152.1
CDS-3UTR GCA 90 bp TTCTTGCAGATTTTGGAAAGAGCTACGTCCAGCTGTTCCTCAATCTGTTCCAAACTGAGGAGGGTACCCTaGCTCAAAGAGCTAACAAAT +
Preference number: 4 (lower is better)
Translates to: FLQILERATSSCSSICSKLRRVP*LKELTN
Trigger: ATTTGTTAGCTCTTTGAGGCAGGGTACCCTCCTCAG...TTTGGAACAGATTGAGGAACAGCTGGACGTAGCTCTTTCCAAAATCTGCAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
CDS-3UTR GCA 90 bp TTGGACCAATGCCACACAAGCTTAGATGTCCTCCACTCTCCAGTCAGAAAGAACTACGCCTCTAATTCTTaGAAATTGAGAACAGGTGGA +
Preference number: 4 (lower is better)
Translates to: LDQCHTSLDVLHSPVRKNYASNS*KLRTGG
Trigger: TCCACCTGTTCTCAATTTGCAAGAATTAGAGGCGTA...GTTCTTTCTGACTGGAGAGTGGAGGACATCTAAGCTTGTGTGGCATTGGTCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR GCA 90 bp TCCTTAGGATTCTGTGAGCTGTTGATGTTACAGGTCATGCATGGCAATCATTGGTGCTTTGCACAGGTCTaGAAGGCATGGAATATAGCT +
Preference number: 4 (lower is better)
Translates to: SLGFCELLMLQVMHGNHWCFAQV*KAWNIA
Trigger: AGCTATATTCCATGCCTTGCAGACCTGTGCAAAGCA...CCAATGATTGCCATGCATGACCTGTAACATCAACAGCTCACAGAATCCTAAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR GCA 90 bp ATTCACCCTCACATTATGCTTATTAAGAACCAAGCTCAGAGGGTAGAAAAGTGCGGCTACCACTCTTTCTaGCAACCCATACAGCGTATC +
Preference number: 4 (lower is better)
Translates to: IHPHIMLIKNQAQRVEKCGYHSF*QPIQRI
Trigger: GATACGCTGTATGGGTTGGCAGAAAGAGTGGTAGCC...GCACTTTTCTACCCTCTGAGCTTGGTTCTTAATAAGCATAATGTGAGGGTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000305866.10
ENST00000441602.5
ENST00000544910.5
ENST00000649152.1
CDS-3UTR GCA 90 bp AGAGTAGCAATTGTTTCCTTATCACCTCCATGCTTGATCACATGCCATTCTGTGAAAGGGCTTTTTGACTaGAGGCATCACAGCATCCAG +
Preference number: 4 (lower is better)
Translates to: RVAIVSLSPPCLITCHSVKGLFD*RHHSIQ
Trigger: CTGGATGCTGTGATGCCTGCAGTCAAAAAGCCCTTT...CACAGAATGGCATGTGATCAAGCATGGAGGTGATAAGGAAACAATTGCTACTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR GCA 90 bp AGCAATTGTTTCCTTATCACCTCCATGCTTGATCACATGCCATTCTGTGCCATCGTTGAATATTCCCTGTaGTCTTTGATCCACCGTTCC +
Preference number: 4 (lower is better)
Translates to: SNCFLITSMLDHMPFCAIVEYSL*SLIHRS
Trigger: GGAACGGTGGATCAAAGAGCACAGGGAATATTCAAC...GATGGCACAGAATGGCATGTGATCAAGCATGGAGGTGATAAGGAAACAATTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR GCA 90 bp CTGTTGATGTTACAGGTCATGCATGGCAATCATTGGACCAATGCCACACAAGCTTCCTTATCACCTCCATaGTTGATCACATGCCATTCT +
Preference number: 4 (lower is better)
Translates to: LLMLQVMHGNHWTNATQASLSPP*LITCHS
Trigger: AGAATGGCATGTGATCAAGCATGGAGGTGATAAGGA...AGCTTGTGTGGCATTGGTCCAATGATTGCCATGCATGACCTGTAACATCAACAG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CCA 90 bp GCCTCTAATTCTTGCAAATTGAGAACAGGTGGAAGCTTCTCCAGCTCATATTTAAGCTTGAGGGTCACTTaGCTGTTCTCGAAGTTCCCT +
Preference number: 4 (lower is better)
Translates to: ASNSCKLRTGGSFSSSYLSLRVT*LFSKFP
Trigger: AGGGAACTTCGAGAACAGCCAAGTGACCCTCAAGCT...TAAATATGAGCTGGAGAAGCTTCCACCTGTTCTCAATTTGCAAGAATTAGAGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436177.5
ENST00000438395.5
ENST00000649152.1
CDS-3UTR CCA 90 bp TTTTATCACCTTAGGTCCCAGAAGACTCATAAGACCCAAGGCCTGTTTCTCACACAACTGAATAGCTCCTaGATAATCTTCCTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: FYHLRSQKTHKTQGLFLTQLNSS*IIFLLQ
Trigger: CTGGAGGAGGAAGATTATCCAGGAGCTATTCAGTTG...TGTGAGAAACAGGCCTTGGGTCTTATGAGTCTTCTGGGACCTAAGGTGATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CCA 90 bp TTGGACCAATGCCACACAAGCTTAGATGTCCTCCACTCTCCAGTCAGAAAGAACAATTCTTGCAGATTTTaGAAAGAGCTACGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: LDQCHTSLDVLHSPVRKNNSCRF*KELRPA
Trigger: AGCTGGACGTAGCTCTTTCCAAAATCTGCAAGAATT...GTTCTTTCTGACTGGAGAGTGGAGGACATCTAAGCTTGTGTGGCATTGGTCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CCA 90 bp ATCAAGCTGGAACTGCAGGAGTCAGAAACGGGGCTGAAAAACGATCAAGCTACAAATTCTTGCAGATTTTaGAAAGAGCTACGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: IKLELQESETGLKNDQATNSCRF*KELRPA
Trigger: AGCTGGACGTAGCTCTTTCCAAAATCTGCAAGAATT...TGTAGCTTGATCGTTTTTCAGCCCCGTTTCTGACTCCTGCAGTTCCAGCTTGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000458707.1
CDS-3UTR CCA 90 bp CTCTCCAGTCAGAAAGAACACACACAAAATTCCTTATCAGACAGTTGGCAAGAGCAGGTCTGCAAGGCATaGAATATAGCTGTCTGGTGT +
Preference number: 4 (lower is better)
Translates to: LSSQKEHTQNSLSDSWQEQVCKA*NIAVWC
Trigger: ACACCAGACAGCTATATTCCATGCCTTGCAGACCTG...CTCTTGCCAACTGTCTGATAAGGAATTTTGTGTGTGTTCTTTCTGACTGGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CCA 90 bp GGAACTGCAGGAGTCAGAAACGGGGCTGAAAAACGATCAAGCTACAGGTTCACACTTCATCTTTGTGGTTaGCCTGAATTTCAAATGGAT +
Preference number: 4 (lower is better)
Translates to: GTAGVRNGAEKRSSYRFTLHLCG*PEFQMD
Trigger: ATCCATTTGAAATTCAGGCCAACCACAAAGATGAAG...TGTGAACCTGTAGCTTGATCGTTTTTCAGCCCCGTTTCTGACTCCTGCAGTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458707.1
CDS-3UTR CCA 90 bp CCATTTCACATTAGCCATGAGAAGCAGCATCTGTTCATAATCAAGGGCTTTACCCACAGCATCCAGATGTaGCTGAAGGAACTCAAACTG +
Preference number: 4 (lower is better)
Translates to: PFHISHEKQHLFIIKGFTHSIQM*LKELKL
Trigger: CAGTTTGAGTTCCTTCAGCCACATCTGGATGCTGTG...GGTAAAGCCCTTGATTATGAACAGATGCTGCTTCTCATGGCTAATGTGAAATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
CDS-3UTR CCA 90 bp TCCTTAGGATTCTGTGAGCTGTTGATGTTACAGGTCATGCATGGCAATCATTGGATGCATGGCAATCATTaGACCAATGCCACACAAGCT +
Preference number: 4 (lower is better)
Translates to: SLGFCELLMLQVMHGNHWMHGNH*TNATQA
Trigger: AGCTTGTGTGGCATTGGTCCAATGATTGCCATGCAT...CCAATGATTGCCATGCATGACCTGTAACATCAACAGCTCACAGAATCCTAAGGA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CCA 90 bp TTTTATCACCTTAGGTCCCAGAAGACTCATAAGACCCAAGGCCTGTTTCTCACAGTTACAGGTCATGCATaGCAATCATTGGACCAATGC +
Preference number: 4 (lower is better)
Translates to: FYHLRSQKTHKTQGLFLTVTGHA*QSLDQC
Trigger: GCATTGGTCCAATGATTGCCATGCATGACCTGTAAC...TGTGAGAAACAGGCCTTGGGTCTTATGAGTCTTCTGGGACCTAAGGTGATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CCA 90 bp AGCAATTGTTTCCTTATCACCTCCATGCTTGATCACATGCCATTCTGTGCCATCGTTACAGGTCATGCATaGCAATCATTGGACCAATGC +
Preference number: 4 (lower is better)
Translates to: SNCFLITSMLDHMPFCAIVTGHA*QSLDQC
Trigger: GCATTGGTCCAATGATTGCCATGCATGACCTGTAAC...GATGGCACAGAATGGCATGTGATCAAGCATGGAGGTGATAAGGAAACAATTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CCA 90 bp AAACGATCAAGCTACAGGTTCACATATGGGACAAACTGTAACAGTCTGCATTCCGGGCCAAAAAGGAGGTaGAAGCTATTCACTAGGACA +
Preference number: 4 (lower is better)
Translates to: KRSSYRFTYGTNCNSLHSGPKRR*KLFTRT
Trigger: TGTCCTAGTGAATAGCTTCCACCTCCTTTTTGGCCC...GGAATGCAGACTGTTACAGTTTGTCCCATATGTGAACCTGTAGCTTGATCGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458707.1
3UTR CAA 72 bp CATAATCAAGGGCTTTACCAGCTACAATCCAGTAAATaGGTTTCCGTAGTTCACTGGCGGTTGAGACTGAGA +
Preference number: 4 (lower is better)
Translates to: HNQGLYQLQSSK*VSVVHWRLRLR
Trigger: TCTCAGTCTCAACCGCCAGTGAACTACGGAAACCAATTTACTGGATTGTAGCTGGTAAAGCCCTTGATTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441602.5
3UTR CAA 72 bp TTATTGATATGGGATCCCAGGCAAACATTCACCAGATaGGTCAGCTGCTTCGTTGAATATTCCCTGTGCTCT +
Preference number: 4 (lower is better)
Translates to: LLIWDPRQTFTR*VSCFVEYSLCS
Trigger: AGAGCACAGGGAATATTCAACGAAGCAGCTGACCAATCTGGTGAATGTTTGCCTGGGATCCCATATCAATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
3UTR CAA 72 bp CATAATCAAGGGCTTTACCAGCTACAATCCAGTAAATaGGTTTCCGTAGTTCACTGGCGGTTGAGACTGTCT +
Preference number: 4 (lower is better)
Translates to: HNQGLYQLQSSK*VSVVHWRLRLS
Trigger: AGACAGTCTCAACCGCCAGTGAACTACGGAAACCAATTTACTGGATTGTAGCTGGTAAAGCCCTTGATTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649152.1
CDS-3UTR TCA 90 bp TCTAATTCTTGCAAATTGAGAACAGGTGGAAGCTTCTCCAGCTCATATTTAACATGCATATCGAAATCCTaGGGAGGGTACCCTGCCTCA +
Preference number: 4 (lower is better)
Translates to: SNSCKLRTGGSFSSSYLTCISKS*GGYPAS
Trigger: TGAGGCAGGGTACCCTCCTCAGGATTTCGATATGCA...TGTTAAATATGAGCTGGAGAAGCTTCCACCTGTTCTCAATTTGCAAGAATTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436177.5
ENST00000438395.5
ENST00000649152.1
CDS-3UTR TCA 90 bp ACAGGTGGAAGCTTCTCCAGCTCATATTTAACAATATCAAATGAATCCACAGAATGCATATCGAAATCCTaGGGAGGGTACCCTGCCTCA +
Preference number: 4 (lower is better)
Translates to: TGGSFSSSYLTISNESTECISKS*GGYPAS
Trigger: TGAGGCAGGGTACCCTCCTCAGGATTTCGATATGCA...TTCTGTGGATTCATTTGATATTGTTAAATATGAGCTGGAGAAGCTTCCACCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436177.5
ENST00000438395.5
ENST00000649152.1
CDS-3UTR TCA 90 bp CAAACATATTCTGAAAGTGCTTCACATTACACTGTGCATTTACAGACATCGCAGAGCTCTTGTTCAGCTTaGGGGTCACTTGGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: QTYSESASHYTVHLQTSQSSCSA*GSLGCS
Trigger: AGAACAGCCAAGTGACCCTCAAGCTGAACAAGAGCT...CTGCGATGTCTGTAAATGCACAGTGTAATGTGAAGCACTTTCAGAATATGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR TCA 90 bp TACAGGTCATGCATGGCAATCATTGGACCAATGCCACACAAGCTTAGATGTCCTCTAATTCTTGCAAATTaGGAACAGGTGGAAGCTTCT +
Preference number: 4 (lower is better)
Translates to: YRSCMAIIGPMPHKLRCPLILAN*EQVEAS
Trigger: AGAAGCTTCCACCTGTTCTCAATTTGCAAGAATTAG...AGGACATCTAAGCTTGTGTGGCATTGGTCCAATGATTGCCATGCATGACCTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR TCA 90 bp TTTTATCACCTTAGGTCCCAGAAGACTCATAAGACCCAAGGCCTGTTTCTCACAAAGACCTGTCTGCAATaGGGTAACTCTTTCAAGTTC +
Preference number: 4 (lower is better)
Translates to: FYHLRSQKTHKTQGLFLTKTCLQ*GNSFKF
Trigger: GAACTTGAAAGAGTTACCTCATTGCAGACAGGTCTT...TGTGAGAAACAGGCCTTGGGTCTTATGAGTCTTCTGGGACCTAAGGTGATAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR TCA 90 bp ATCAAGCTGGAACTGCAGGAGTCAGAAACGGGGCTGAAAAACGATCAAGCTACACTTGCATCAACCTGCTaGTTATATCCAAAACAAAGA +
Preference number: 4 (lower is better)
Translates to: IKLELQESETGLKNDQATLASTC*LYPKQR
Trigger: TCTTTGTTTTGGATATAATCAGCAGGTTGATGCAAG...TGTAGCTTGATCGTTTTTCAGCCCCGTTTCTGACTCCTGCAGTTCCAGCTTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000458707.1
CDS-3UTR TCA 90 bp TTGGACCAATGCCACACAAGCTTAGATGTCCTCCACTCTCCAGTCAGAAAGAACCAAGATGCTGAAATTTaGCTTAACAGGACAAAGTTC +
Preference number: 4 (lower is better)
Translates to: LDQCHTSLDVLHSPVRKNQDAEI*LNRTKF
Trigger: GAACTTTGTCCTGTTAAGTCAAATTTCAGCATCTTG...GTTCTTTCTGACTGGAGAGTGGAGGACATCTAAGCTTGTGTGGCATTGGTCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR TCA 90 bp ATGTATAACTGTAGTCACATAACCATTGTTATGACAAGGCGGCAACATCATTTCGTCAAAACCACTAGGTaGCTGAGGTGTGGACTTGGC +
Preference number: 4 (lower is better)
Translates to: MYNCSHITIVMTRRQHHFVKTTR*LRCGLG
Trigger: GCCAAGTCCACACCTCAGTCACCTAGTGGTTTTGAC...GAAATGATGTTGCCGCCTTGTCATAACAATGGTTATGTGACTACAGTTATACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000305866.10
ENST00000441602.5
ENST00000544910.5
ENST00000649152.1
CDS-3UTR TCA 90 bp GTCATGCTTTTCATGCCATTCCATAGTCCTATAATAGCTGAGCATAACTTCCCAGGTCAGCTGCTTCGTTaGATATTCCCTGTGCTCTTT +
Preference number: 4 (lower is better)
Translates to: VMLFMPFHSPIIAEHNFPGQLLR*IFPVLF
Trigger: AAAGAGCACAGGGAATATTCAACGAAGCAGCTGACC...TGGGAAGTTATGCTCAGCTATTATAGGACTATGGAATGGCATGAAAAGCATGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
CDS-3UTR TCA 90 bp AGTAGCAATTGTTTCCTTATCACCTCCATGCTTGATCACATGCCATTCTGTGCCGTCTTGCTTTCTTATTaGTATGGGATCCCAGGCAAA +
Preference number: 4 (lower is better)
Translates to: SSNCFLITSMLDHMPFCAVLLSY*YGIPGK
Trigger: TTTGCCTGGGATCCCATATCAATAAGAAAGCAAGAC...GGCACAGAATGGCATGTGATCAAGCATGGAGGTGATAAGGAAACAATTGCTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR TCA 90 bp TTTTATCACCTTAGGTCCCAGAAGACTCATAAGACCCAAGGCCTGTTTCTCACAGTCTTGCTTTCTTATTaGTATGGGATCCCAGGCAAA +
Preference number: 4 (lower is better)
Translates to: FYHLRSQKTHKTQGLFLTVLLSY*YGIPGK
Trigger: TTTGCCTGGGATCCCATATCAATAAGAAAGCAAGAC...TGTGAGAAACAGGCCTTGGGTCTTATGAGTCTTCTGGGACCTAAGGTGATAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR TCA 90 bp CATATTCTGAAAGTGCTTCACATTACACTGTGCATTTACAGACATCGCAGGGACCTGCACTATAGTTCATaGCATCTGCATGCCACACAA +
Preference number: 4 (lower is better)
Translates to: HILKVLHITLCIYRHRRDLHYSS*HLHATQ
Trigger: TTGTGTGGCATGCAGATGTCATGAACTATAGTGCAG...GTCCCTGCGATGTCTGTAAATGCACAGTGTAATGTGAAGCACTTTCAGAATATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR TCA 90 bp TTTTATCACCTTAGGTCCCAGAAGACTCATAAGACCCAAGGCCTGTTTCTCACACCGTACATTTATGAGTaGCTAGCAGACAACTGTTTC +
Preference number: 4 (lower is better)
Translates to: FYHLRSQKTHKTQGLFLTPYIYE*LADNCF
Trigger: GAAACAGTTGTCTGCTAGTCACTCATAAATGTACGG...TGTGAGAAACAGGCCTTGGGTCTTATGAGTCTTCTGGGACCTAAGGTGATAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR TCA 90 bp AGTAGCAATTGTTTCCTTATCACCTCCATGCTTGATCACATGCCATTCTGTGCCATGACCGTACATTTATaGGTGACTAGCAGACAACTG +
Preference number: 4 (lower is better)
Translates to: SSNCFLITSMLDHMPFCAMTVHL*VTSRQL
Trigger: CAGTTGTCTGCTAGTCACTCATAAATGTACGGTCAT...GGCACAGAATGGCATGTGATCAAGCATGGAGGTGATAAGGAAACAATTGCTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR TCA 90 bp CTTGATCACATGCCATTCTGTGCCATCCATTTTATCACCTTAGGTCCCAGAAGAATGACCGTACATTTATaGGTGACTAGCAGACAACTG +
Preference number: 4 (lower is better)
Translates to: LDHMPFCAIHFITLGPRRMTVHL*VTSRQL
Trigger: CAGTTGTCTGCTAGTCACTCATAAATGTACGGTCAT...TCTTCTGGGACCTAAGGTGATAAAATGGATGGCACAGAATGGCATGTGATCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR TCA 90 bp TCCTTAGGATTCTGTGAGCTGTTGATGTTACAGGTCATGCATGGCAATCATTGGACAGCACATACTTACTaGAGACTAAGTGGATTCCAG +
Preference number: 4 (lower is better)
Translates to: SLGFCELLMLQVMHGNHWTAHTY*RLSGFQ
Trigger: CTGGAATCCACTTAGTCTTCAGTAAGTATGTGCTGT...CCAATGATTGCCATGCATGACCTGTAACATCAACAGCTCACAGAATCCTAAGGA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR TCA 90 bp CATCACAGCATCCAGATGTGGCTGAAGGAACTCAAACTGTTCAGCCAAGAATACCTAATTCTTGCAAATTaGGAACAGGTGGAAGCTTAC +
Preference number: 4 (lower is better)
Translates to: HHSIQMWLKELKLFSQEYLILAN*EQVEAY
Trigger: GTAAGCTTCCACCTGTTCTCAATTTGCAAGAATTAG...GTATTCTTGGCTGAACAGTTTGAGTTCCTTCAGCCACATCTGGATGCTGTGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441602.5
CDS-3UTR TCA 90 bp AAACGATCAAGCTACAGGTTCACATATGGGACAAACTGTAACAGTCTGCATTCCAACGTCTGTTGTAGATaGCAGACAGTAGATGGGAAC +
Preference number: 4 (lower is better)
Translates to: KRSSYRFTYGTNCNSLHSNVCCR*QTVDGN
Trigger: GTTCCCATCTACTGTCTGTCATCTACAACAGACGTT...GGAATGCAGACTGTTACAGTTTGTCCCATATGTGAACCTGTAGCTTGATCGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458707.1
CDS-3UTR GCA 90 bp ATCAAGCTGGAACTGCAGGAGTCAGAAACGGGGCTGAAAAACGATCAAGCTACAATGAAGTTGATCCATTaGTGTCTGTGTTTTTCCAAG +
Preference number: 4 (lower is better)
Translates to: IKLELQESETGLKNDQATMKLIH*CLCFSK
Trigger: CTTGGAAAAACACAGACAGCAATGGATCAACTTCAT...TGTAGCTTGATCGTTTTTCAGCCCCGTTTCTGACTCCTGCAGTTCCAGCTTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000458707.1
CDS-3UTR GCA 90 bp TTGGACCAATGCCACACAAGCTTAGATGTCCTCCACTCTCCAGTCAGAAAGAACATGAAGTTGATCCATTaGTGTCTGTGTTTTTCCAAG +
Preference number: 4 (lower is better)
Translates to: LDQCHTSLDVLHSPVRKNMKLIH*CLCFSK
Trigger: CTTGGAAAAACACAGACAGCAATGGATCAACTTCAT...GTTCTTTCTGACTGGAGAGTGGAGGACATCTAAGCTTGTGTGGCATTGGTCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR GCA 90 bp AGACTTGCTACCACAAAATTCTTCTCCAACTTGCATCAACCTGCTGATTATATCCTTCCCATAGTGCTTTaGACAGGTCTGCAAGGCATG +
Preference number: 4 (lower is better)
Translates to: RLATTKFFSNLHQPADYILPIVL*TGLQGM
Trigger: CATGCCTTGCAGACCTGTGCAAAGCACTATGGGAAG...GATATAATCAGCAGGTTGATGCAAGTTGGAGAAGAATTTTGTGGTAGCAAGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
CDS-3UTR GCA 90 bp CCATTTCACATTAGCCATGAGAAGCAGCATCTGTTCATAATCAAGGGCTTTACCCCACCACTACAGTACTaGTCAAACAAGGTCACTGTT +
Preference number: 4 (lower is better)
Translates to: PFHISHEKQHLFIIKGFTPPLQY*SNKVTV
Trigger: AACAGTGACCTTGTTTGAGCAGTACTGTAGTGGTGG...GGTAAAGCCCTTGATTATGAACAGATGCTGCTTCTCATGGCTAATGTGAAATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
CDS-3UTR GCA 90 bp CATATTCTGAAAGTGCTTCACATTACACTGTGCATTTACAGACATCGCAGGGACCCACCACTACAGTACTaGTCAAACAAGGTCACTGTT +
Preference number: 4 (lower is better)
Translates to: HILKVLHITLCIYRHRRDPPLQY*SNKVTV
Trigger: AACAGTGACCTTGTTTGAGCAGTACTGTAGTGGTGG...GTCCCTGCGATGTCTGTAAATGCACAGTGTAATGTGAAGCACTTTCAGAATATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR GCA 90 bp TGCAGATTTTGGAAAGAGCTACGTCCAGCTGTTCCTCAATCTGTTCCAAAGTATGTTGAATATTCCCTGTaGTCTTTGATCCACCGTTCC +
Preference number: 4 (lower is better)
Translates to: CRFWKELRPAVPQSVPKYVEYSL*SLIHRS
Trigger: GGAACGGTGGATCAAAGAGCACAGGGAATATTCAAC...ATACTTTGGAACAGATTGAGGAACAGCTGGACGTAGCTCTTTCCAAAATCTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
CDS-3UTR GCA 90 bp TGCAGATTTTGGAAAGAGCTACGTCCAGCTGTTCCTCAATCTGTTCCAAAGTATACCAGATTGGTCAGCTaGTTCGTTGAATATTCCCTG +
Preference number: 4 (lower is better)
Translates to: CRFWKELRPAVPQSVPKYTRLVS*FVEYSL
Trigger: CAGGGAATATTCAACGAAGCAGCTGACCAATCTGGT...ATACTTTGGAACAGATTGAGGAACAGCTGGACGTAGCTCTTTCCAAAATCTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
CDS-3UTR GCA 90 bp AGTAGCAATTGTTTCCTTATCACCTCCATGCTTGATCACATGCCATTCTGTGCCAAAGGTCTGTCAGATTaGATGGTCGAGTCTCTAACA +
Preference number: 4 (lower is better)
Translates to: SSNCFLITSMLDHMPFCAKGLSD*MVESLT
Trigger: TGTTAGAGACTCGACCATGCAATCTGACAGACCTTT...GGCACAGAATGGCATGTGATCAAGCATGGAGGTGATAAGGAAACAATTGCTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CCA 90 bp CTCTCCAGTCAGAAAGAACACACACAAAATTCCTTATCAGACAGTTGGCAAGAGCAACTGAATAGCTCCTaGATAATCTTCCTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: LSSQKEHTQNSLSDSWQEQLNSS*IIFLLQ
Trigger: CTGGAGGAGGAAGATTATCCAGGAGCTATTCAGTTG...CTCTTGCCAACTGTCTGATAAGGAATTTTGTGTGTGTTCTTTCTGACTGGAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CCA 90 bp CCATTTCACATTAGCCATGAGAAGCAGCATCTGTTCATAATCAAGGGCTTTACCCAACTGAATAGCTCCTaGATAATCTTCCTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: PFHISHEKQHLFIIKGFTQLNSS*IIFLLQ
Trigger: CTGGAGGAGGAAGATTATCCAGGAGCTATTCAGTTG...GGTAAAGCCCTTGATTATGAACAGATGCTGCTTCTCATGGCTAATGTGAAATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
CDS-3UTR CCA 90 bp GATCAAGCTACAGGTTCACATATGGGACAAACTGTAACAGTCTGCATTCCCCACTGGAATATAGCTGTCTaGTGTAACATGTGTACAGAG +
Preference number: 4 (lower is better)
Translates to: DQATGSHMGQTVTVCIPHWNIAV*CNMCTE
Trigger: CTCTGTACACATGTTACACCAGACAGCTATATTCCA...GTGGGGAATGCAGACTGTTACAGTTTGTCCCATATGTGAACCTGTAGCTTGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458707.1
CDS-3UTR CCA 90 bp TACAGGTCATGCATGGCAATCATTGGACCAATGCCACACAAGCTTAGATGTCCTTGGAATATAGCTGTCTaGTGTAACATGTGTACAGAG +
Preference number: 4 (lower is better)
Translates to: YRSCMAIIGPMPHKLRCPWNIAV*CNMCTE
Trigger: CTCTGTACACATGTTACACCAGACAGCTATATTCCA...AGGACATCTAAGCTTGTGTGGCATTGGTCCAATGATTGCCATGCATGACCTGTA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CCA 90 bp CAGTTCCAAGCAAGTAGGTTTTTACTTTTAGCTGAACATCCTGCCATATTCGTGATACCAAGGATTCCGTaGCTACCACTCTTTCTGCCA +
Preference number: 4 (lower is better)
Translates to: QFQASRFLLLAEHPAIFVIPRIP*LPLFLP
Trigger: TGGCAGAAAGAGTGGTAGCCACGGAATCCTTGGTAT...CACGAATATGGCAGGATGTTCAGCTAAAAGTAAAAACCTACTTGCTTGGAACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
CDS-3UTR CCA 90 bp CTGTTGATGTTACAGGTCATGCATGGCAATCATTGGACCAATGCCACACAAGCTAAACATTCACCAGATTaGTCAGCTGCTTCGTTGAAT +
Preference number: 4 (lower is better)
Translates to: LLMLQVMHGNHWTNATQAKHSPD*SAASLN
Trigger: ATTCAACGAAGCAGCTGACCAATCTGGTGAATGTTT...AGCTTGTGTGGCATTGGTCCAATGATTGCCATGCATGACCTGTAACATCAACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CCA 90 bp GCCAATCGTATACAATGTTCCCAAAGTATATTAGACACAGGCAAGGGTATGCGAATGCATGGCAATCATTaGACCAATGCCACACAAGCT +
Preference number: 4 (lower is better)
Translates to: ANRIQCSQSILDTGKGMRMHGNH*TNATQA
Trigger: AGCTTGTGTGGCATTGGTCCAATGATTGCCATGCAT...TCGCATACCCTTGCCTGTGTCTAATATACTTTGGGAACATTGTATACGATTGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649152.1
CDS-3UTR CCA 90 bp CTACTTAGAATCAAGCTGGAACTGCAGGAGTCAGAAACGGGGCTGAAAAACGATTACTTAGAATCAAGCTaGAACTGCAGGAGTCAGAAA +
Preference number: 4 (lower is better)
Translates to: LLRIKLELQESETGLKNDYLESS*NCRSQK
Trigger: TTTCTGACTCCTGCAGTTCCAGCTTGATTCTAAGTA...ATCGTTTTTCAGCCCCGTTTCTGACTCCTGCAGTTCCAGCTTGATTCTAAGTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458707.1
3UTR CAA 72 bp ACCAAGAACAACTTGAAACACGGTGTTGTGAATGGCTaGGGTGAAGTGCATATGAAGTTGATCCATTGCTGT +
Preference number: 4 (lower is better)
Translates to: TKNNLKHGVVNG*GEVHMKLIHCC
Trigger: ACAGCAATGGATCAACTTCATATGCACTTCACCCAAGCCATTCACAACACCGTGTTTCAAGTTGTTCTTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
CDS-3UTR TCA 90 bp TTCCTTATCAGACAGTTGGCAAGAGTACATGGAAAATGGATTTTTATGTCACATTGCATATCGAAATCCTaGGGAGGGTACCCTGCCTCA +
Preference number: 4 (lower is better)
Translates to: FLIRQLARVHGKWIFMSHCISKS*GGYPAS
Trigger: TGAGGCAGGGTACCCTCCTCAGGATTTCGATATGCA...ATGTGACATAAAAATCCATTTTCCATGTACTCTTGCCAACTGTCTGATAAGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR TCA 90 bp ACAGGTGGAAGCTTCTCCAGCTCATATTTAACAATATCAAATGAATCCACAGAATCACTGAGGCTTTCTTaGGGGCTTTTCAGACCCTGT +
Preference number: 4 (lower is better)
Translates to: TGGSFSSSYLTISNESTESLRLS*GLFRPC
Trigger: ACAGGGTCTGAAAAGCCCTCAAGAAAGCCTCAGTGA...TTCTGTGGATTCATTTGATATTGTTAAATATGAGCTGGAGAAGCTTCCACCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000436177.5
ENST00000438395.5
ENST00000649152.1
CDS-3UTR TCA 90 bp CCATTTCACATTAGCCATGAGAAGCAGCATCTGTTCATAATCAAGGGCTTTACCTCTTTGTGGTTGGCCTaGATTTCAAATGGATTCCCA +
Preference number: 4 (lower is better)
Translates to: PFHISHEKQHLFIIKGFTSLWLA*ISNGFP
Trigger: TGGGAATCCATTTGAAATTCAGGCCAACCACAAAGA...GGTAAAGCCCTTGATTATGAACAGATGCTGCTTCTCATGGCTAATGTGAAATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
CDS-3UTR TCA 90 bp AATTCTTGCAAATTGAGAACAGGTGGAAGCTTCTCCAGCTCATATTTAACAATAGTCAAAACCACTAGGTaGCTGAGGTGTGGACTTGGC +
Preference number: 4 (lower is better)
Translates to: NSCKLRTGGSFSSSYLTIVKTTR*LRCGLG
Trigger: GCCAAGTCCACACCTCAGTCACCTAGTGGTTTTGAC...TATTGTTAAATATGAGCTGGAGAAGCTTCCACCTGTTCTCAATTTGCAAGAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649152.1
CDS-3UTR TCA 90 bp CAAACATATTCTGAAAGTGCTTCACATTACACTGTGCATTTACAGACATCGCAGGGTCAGCTGCTTCGTTaGATATTCCCTGTGCTCTTT +
Preference number: 4 (lower is better)
Translates to: QTYSESASHYTVHLQTSQGQLLR*IFPVLF
Trigger: AAAGAGCACAGGGAATATTCAACGAAGCAGCTGACC...CTGCGATGTCTGTAAATGCACAGTGTAATGTGAAGCACTTTCAGAATATGTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR TCA 90 bp TCCTTAGGATTCTGTGAGCTGTTGATGTTACAGGTCATGCATGGCAATCATTGGTCAGGTCATATATGTTaGGTGAGGATCAATGCCATT +
Preference number: 4 (lower is better)
Translates to: SLGFCELLMLQVMHGNHWSGHIC*VRINAI
Trigger: AATGGCATTGATCCTCACTCAACATATATGACCTGA...CCAATGATTGCCATGCATGACCTGTAACATCAACAGCTCACAGAATCCTAAGGA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR TCA 90 bp AGAGTAGCAATTGTTTCCTTATCACCTCCATGCTTGATCACATGCCATTCTGTGATGCTACTCAGGCATTaGAAAGGTACCCTCAATGAA +
Preference number: 4 (lower is better)
Translates to: RVAIVSLSPPCLITCHSVMLLRH*KGTLNE
Trigger: TTCATTGAGGGTACCTTTTCAATGCCTGAGTAGCAT...CACAGAATGGCATGTGATCAAGCATGGAGGTGATAAGGAAACAATTGCTACTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR TCA 90 bp AGAGTAGCAATTGTTTCCTTATCACCTCCATGCTTGATCACATGCCATTCTGTGCCGTACATTTATGAGTaGCTAGCAGACAACTGTTTC +
Preference number: 4 (lower is better)
Translates to: RVAIVSLSPPCLITCHSVPYIYE*LADNCF
Trigger: GAAACAGTTGTCTGCTAGTCACTCATAAATGTACGG...CACAGAATGGCATGTGATCAAGCATGGAGGTGATAAGGAAACAATTGCTACTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR TCA 90 bp CTCTCCAGTCAGAAAGAACACACACAAAATTCCTTATCAGACAGTTGGCAAGAGACAGCACATACTTACTaGAGACTAAGTGGATTCCAG +
Preference number: 4 (lower is better)
Translates to: LSSQKEHTQNSLSDSWQETAHTY*RLSGFQ
Trigger: CTGGAATCCACTTAGTCTTCAGTAAGTATGTGCTGT...CTCTTGCCAACTGTCTGATAAGGAATTTTGTGTGTGTTCTTTCTGACTGGAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR TCA 90 bp ATGTATAACTGTAGTCACATAACCATTGTTATGACAAGGCGGCAACATCATTTCAGACATCGCAGGGACTaGTGGACACAGAGTAGCAAT +
Preference number: 4 (lower is better)
Translates to: MYNCSHITIVMTRRQHHFRHRRD*WTQSSN
Trigger: ATTGCTACTCTGTGTCCATCAGTCCCTGCGATGTCT...GAAATGATGTTGCCGCCTTGTCATAACAATGGTTATGTGACTACAGTTATACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR TCA 90 bp GTCATGCTTTTCATGCCATTCCATAGTCCTATAATAGCTGAGCATAACTTCCCAGCTCTACCAGGCAGGTaGTTCCTGTTCATATTATCT +
Preference number: 4 (lower is better)
Translates to: VMLFMPFHSPIIAEHNFPALPGR*FLFILS
Trigger: AGATAATATGAACAGGAATCACCTGCCTGGTAGAGC...TGGGAAGTTATGCTCAGCTATTATAGGACTATGGAATGGCATGAAAAGCATGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649152.1
CDS-3UTR TCA 90 bp TTTTATCACCTTAGGTCCCAGAAGACTCATAAGACCCAAGGCCTGTTTCTCACACTGGTAACTCTCTTGTaGTTAGGTAACTTCATGACT +
Preference number: 4 (lower is better)
Translates to: FYHLRSQKTHKTQGLFLTLVTLL*LGNFMT
Trigger: AGTCATGAAGTTACCTAATCACAAGAGAGTTACCAG...TGTGAGAAACAGGCCTTGGGTCTTATGAGTCTTCTGGGACCTAAGGTGATAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR TCA 90 bp GATCAAGCTACAGGTTCACATATGGGACAAACTGTAACAGTCTGCATTCCCCACCGTCAACAAGTCTTATaGCGTTCAATGTTGTATTTG +
Preference number: 4 (lower is better)
Translates to: DQATGSHMGQTVTVCIPHRQQVL*RSMLYL
Trigger: CAAATACAACATTGAACGTCATAAGACTTGTTGACG...GTGGGGAATGCAGACTGTTACAGTTTGTCCCATATGTGAACCTGTAGCTTGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458707.1
CDS-3UTR GCA 90 bp CAAACATATTCTGAAAGTGCTTCACATTACACTGTGCATTTACAGACATCGCAGCTGAGGAGGGTACCCTaGCTCAAAGAGCTAACAAAT +
Preference number: 4 (lower is better)
Translates to: QTYSESASHYTVHLQTSQLRRVP*LKELTN
Trigger: ATTTGTTAGCTCTTTGAGGCAGGGTACCCTCCTCAG...CTGCGATGTCTGTAAATGCACAGTGTAATGTGAAGCACTTTCAGAATATGTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR GCA 90 bp TCCTTAGGATTCTGTGAGCTGTTGATGTTACAGGTCATGCATGGCAATCATTGGTACGCCTCTAATTCTTaGAAATTGAGAACAGGTGGA +
Preference number: 4 (lower is better)
Translates to: SLGFCELLMLQVMHGNHWYASNS*KLRTGG
Trigger: TCCACCTGTTCTCAATTTGCAAGAATTAGAGGCGTA...CCAATGATTGCCATGCATGACCTGTAACATCAACAGCTCACAGAATCCTAAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR GCA 90 bp AGTAGCAATTGTTTCCTTATCACCTCCATGCTTGATCACATGCCATTCTGTGCCTACGCCTCTAATTCTTaGAAATTGAGAACAGGTGGA +
Preference number: 4 (lower is better)
Translates to: SSNCFLITSMLDHMPFCAYASNS*KLRTGG
Trigger: TCCACCTGTTCTCAATTTGCAAGAATTAGAGGCGTA...GGCACAGAATGGCATGTGATCAAGCATGGAGGTGATAAGGAAACAATTGCTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR GCA 90 bp ATCAAGCTGGAACTGCAGGAGTCAGAAACGGGGCTGAAAAACGATCAAGCTACAAATTCTTCTCCAACTTaGATCAACCTGCTGATTATA +
Preference number: 4 (lower is better)
Translates to: IKLELQESETGLKNDQATNSSPT*INLLII
Trigger: TATAATCAGCAGGTTGATGCAAGTTGGAGAAGAATT...TGTAGCTTGATCGTTTTTCAGCCCCGTTTCTGACTCCTGCAGTTCCAGCTTGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458707.1
CDS-3UTR GCA 90 bp CAGAGATTTCAGAAGTCCAATCAGCAACTGACGTTTCCTTTGATTTGCAAGAAGCCACCACTACAGTACTaGTCAAACAAGGTCACTGTT +
Preference number: 4 (lower is better)
Translates to: QRFQKSNQQLTFPLICKKPPLQY*SNKVTV
Trigger: AACAGTGACCTTGTTTGAGCAGTACTGTAGTGGTGG...CTTCTTGCAAATCAAAGGAAACGTCAGTTGCTGATTGGACTTCTGAAATCTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
CDS-3UTR GCA 90 bp CATCACAGCATCCAGATGTGGCTGAAGGAACTCAAACTGTTCAGCCAAGAATACAATCTGATTTCTTCCTaGTTTTTAGAGTTTCCCGAG +
Preference number: 4 (lower is better)
Translates to: HHSIQMWLKELKLFSQEYNLISS*FLEFPE
Trigger: CTCGGGAAACTCTAAAAAGCAGGAAGAAATCAGATT...GTATTCTTGGCTGAACAGTTTGAGTTCCTTCAGCCACATCTGGATGCTGTGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
CDS-3UTR GCA 90 bp CTACTTAGAATCAAGCTGGAACTGCAGGAGTCAGAAACGGGGCTGAAAAACGATAATCTGATTTCTTCCTaGTTTTTAGAGTTTCCCGAG +
Preference number: 4 (lower is better)
Translates to: LLRIKLELQESETGLKNDNLISS*FLEFPE
Trigger: CTCGGGAAACTCTAAAAAGCAGGAAGAAATCAGATT...ATCGTTTTTCAGCCCCGTTTCTGACTCCTGCAGTTCCAGCTTGATTCTAAGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000458707.1
CDS-3UTR GCA 90 bp ATGTATAACTGTAGTCACATAACCATTGTTATGACAAGGCGGCAACATCATTTCGGCTACCACTCTTTCTaGCAACCCATACAGCGTATC +
Preference number: 4 (lower is better)
Translates to: MYNCSHITIVMTRRQHHFGYHSF*QPIQRI
Trigger: GATACGCTGTATGGGTTGGCAGAAAGAGTGGTAGCC...GAAATGATGTTGCCGCCTTGTCATAACAATGGTTATGTGACTACAGTTATACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000305866.10
ENST00000441602.5
ENST00000544910.5
ENST00000649152.1
CDS-3UTR GCA 90 bp TTTAGAGTTGTTCTTAGTCTACTACTACTAAGGCCGAGTCCAGTTGATTCCAATAAAGGGCTTTTTGACTaGAGGCATCACAGCATCCAG +
Preference number: 4 (lower is better)
Translates to: FRVVLSLLLLRPSPVDSNKGLFD*RHHSIQ
Trigger: CTGGATGCTGTGATGCCTGCAGTCAAAAAGCCCTTT...ATTGGAATCAACTGGACTCGGCCTTAGTAGTAGTAGACTAAGAACAACTCTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
CDS-3UTR GCA 90 bp CAGAGATTTCAGAAGTCCAATCAGCAACTGACGTTTCCTTTGATTTGCAAGAAGACCAGATTGGTCAGCTaGTTCGTTGAATATTCCCTG +
Preference number: 4 (lower is better)
Translates to: QRFQKSNQQLTFPLICKKTRLVS*FVEYSL
Trigger: CAGGGAATATTCAACGAAGCAGCTGACCAATCTGGT...CTTCTTGCAAATCAAAGGAAACGTCAGTTGCTGATTGGACTTCTGAAATCTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
CDS-3UTR GCA 90 bp TTTCTTATTGATATGGGATCCCAGGCAAACATTCACCAGATTGGTCAGCTGCTTCAATCATTGGACCAATaGCACACAAGCTTAGATGTC +
Preference number: 4 (lower is better)
Translates to: FLIDMGSQANIHQIGQLLQSLDQ*HTSLDV
Trigger: GACATCTAAGCTTGTGTGGCATTGGTCCAATGATTG...AAGCAGCTGACCAATCTGGTGAATGTTTGCCTGGGATCCCATATCAATAAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649152.1
CDS-3UTR GCA 90 bp CATATTCTGAAAGTGCTTCACATTACACTGTGCATTTACAGACATCGCAGGGACTCCTTATCACCTCCATaGTTGATCACATGCCATTCT +
Preference number: 4 (lower is better)
Translates to: HILKVLHITLCIYRHRRDSLSPP*LITCHS
Trigger: AGAATGGCATGTGATCAAGCATGGAGGTGATAAGGA...GTCCCTGCGATGTCTGTAAATGCACAGTGTAATGTGAAGCACTTTCAGAATATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR GCA 90 bp CATATTCTGAAAGTGCTTCACATTACACTGTGCATTTACAGACATCGCAGGGACAAAGGTCTGTCAGATTaGATGGTCGAGTCTCTAACA +
Preference number: 4 (lower is better)
Translates to: HILKVLHITLCIYRHRRDKGLSD*MVESLT
Trigger: TGTTAGAGACTCGACCATGCAATCTGACAGACCTTT...GTCCCTGCGATGTCTGTAAATGCACAGTGTAATGTGAAGCACTTTCAGAATATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR GCA 90 bp AATGGCTTGGGTGAAGTGCATATGAAGTTGATCCATTGCTGTCTGTGTTTTTCCAAAGGTCTGTCAGATTaGATGGTCGAGTCTCTAACA +
Preference number: 4 (lower is better)
Translates to: NGLGEVHMKLIHCCLCFSKGLSD*MVESLT
Trigger: TGTTAGAGACTCGACCATGCAATCTGACAGACCTTT...GGAAAAACACAGACAGCAATGGATCAACTTCATATGCACTTCACCCAAGCCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649152.1
CDS-3UTR CCA 90 bp TTGTCTCTATACGCCTCTAATTCTTGCAAATTGAGAACAGGTGGAAGCTTCTCCCAAATTGAGAACAGGTaGAAGCTTCTCCAGCTCATA +
Preference number: 4 (lower is better)
Translates to: LSLYASNSCKLRTGGSFSQIENR*KLLQLI
Trigger: TATGAGCTGGAGAAGCTTCCACCTGTTCTCAATTTG...GGAGAAGCTTCCACCTGTTCTCAATTTGCAAGAATTAGAGGCGTATAGAGACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436177.5
ENST00000438395.5
ENST00000649152.1
CDS-3UTR CCA 90 bp ATTCACCCTCACATTATGCTTATTAAGAACCAAGCTCAGAGGGTAGAAAAGTGCCAACTGAATAGCTCCTaGATAATCTTCCTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: IHPHIMLIKNQAQRVEKCQLNSS*IIFLLQ
Trigger: CTGGAGGAGGAAGATTATCCAGGAGCTATTCAGTTG...GCACTTTTCTACCCTCTGAGCTTGGTTCTTAATAAGCATAATGTGAGGGTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000305866.10
ENST00000441602.5
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CCA 90 bp GCTTTCTTATTGATATGGGATCCCAGGCAAACATTCACCAGATTGGTCAGCTGCCTTCATCTTTGTGGTTaGCCTGAATTTCAAATGGAT +
Preference number: 4 (lower is better)
Translates to: AFLLIWDPRQTFTRLVSCLHLCG*PEFQMD
Trigger: ATCCATTTGAAATTCAGGCCAACCACAAAGATGAAG...GCAGCTGACCAATCTGGTGAATGTTTGCCTGGGATCCCATATCAATAAGAAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
CDS-3UTR CCA 90 bp CTTTTGTATCAATTCCTATTACCTTGGAAAACACTGGGCTCTACCAGGCAGGTGGCTTTCTTATTGATATaGGATCCCAGGCAAACATTC +
Preference number: 4 (lower is better)
Translates to: LLYQFLLPWKTLGSTRQVAFLLI*DPRQTF
Trigger: GAATGTTTGCCTGGGATCCCATATCAATAAGAAAGC...CACCTGCCTGGTAGAGCCCAGTGTTTTCCAAGGTAATAGGAATTGATACAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CCA 90 bp CCATTTCACATTAGCCATGAGAAGCAGCATCTGTTCATAATCAAGGGCTTTACCCAATTCCTATTACCTTaGAAAACACTGGGCTCTACC +
Preference number: 4 (lower is better)
Translates to: PFHISHEKQHLFIIKGFTQFLLP*KTLGST
Trigger: GGTAGAGCCCAGTGTTTTCCAAGGTAATAGGAATTG...GGTAAAGCCCTTGATTATGAACAGATGCTGCTTCTCATGGCTAATGTGAAATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649152.1
CDS-3UTR CCA 90 bp CCATTTCACATTAGCCATGAGAAGCAGCATCTGTTCATAATCAAGGGCTTTACCCAAATTGAGAACAGGTaGAAGCTTACGTGTAGCTCA +
Preference number: 4 (lower is better)
Translates to: PFHISHEKQHLFIIKGFTQIENR*KLTCSS
Trigger: TGAGCTACACGTAAGCTTCCACCTGTTCTCAATTTG...GGTAAAGCCCTTGATTATGAACAGATGCTGCTTCTCATGGCTAATGTGAAATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441602.5
CDS-3UTR CCA 90 bp GTCATGCTTTTCATGCCATTCCATAGTCCTATAATAGCTGAGCATAACTTCCCAGTTTCCGTAGTTCACTaGCGGTTGAGACTGAGAATA +
Preference number: 4 (lower is better)
Translates to: VMLFMPFHSPIIAEHNFPVSVVH*RLRLRI
Trigger: TATTCTCAGTCTCAACCGCCAGTGAACTACGGAAAC...TGGGAAGTTATGCTCAGCTATTATAGGACTATGGAATGGCATGAAAAGCATGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441602.5
3UTR CAA 72 bp CACAGAGTAGCAATTGTTTCCTTATCACCTCCATGCTaGATCACATGCCATTCTGTGCCATCCATTTTATCA +
Preference number: 4 (lower is better)
Translates to: HRVAIVSLSPPC*ITCHSVPSILS
Trigger: TGATAAAATGGATGGCACAGAATGGCATGTGATCAAGCATGGAGGTGATAAGGAAACAATTGCTACTCTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR TCA 90 bp AATTCTTGCAAATTGAGAACAGGTGGAAGCTTCTCCAGCTCATATTTAACAATATGGCACCAAGATCACTaGGGCTTTCTTGAGGGCTTT +
Preference number: 4 (lower is better)
Translates to: NSCKLRTGGSFSSSYLTIWHQDH*GFLEGF
Trigger: AAAGCCCTCAAGAAAGCCTCAGTGATCTTGGTGCCA...TATTGTTAAATATGAGCTGGAGAAGCTTCCACCTGTTCTCAATTTGCAAGAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436177.5
ENST00000438395.5
ENST00000649152.1
CDS-3UTR TCA 90 bp AATTCTTGCAAATTGAGAACAGGTGGAAGCTTCTCCAGCTCATATTTAACAATAAGCTCTTGTTCAGCTTaGGGGTCACTTGGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: NSCKLRTGGSFSSSYLTISSCSA*GSLGCS
Trigger: AGAACAGCCAAGTGACCCTCAAGCTGAACAAGAGCT...TATTGTTAAATATGAGCTGGAGAAGCTTCCACCTGTTCTCAATTTGCAAGAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436177.5
ENST00000438395.5
ENST00000649152.1
CDS-3UTR TCA 90 bp TCACATAACCATTGTTATGACAAGGCGGCAACATCATTTCAGATTACAACAAATAGCTCTTGTTCAGCTTaGGGGTCACTTGGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: SHNHCYDKAATSFQITTNSSCSA*GSLGCS
Trigger: AGAACAGCCAAGTGACCCTCAAGCTGAACAAGAGCT...ATTTGTTGTAATCTGAAATGATGTTGCCGCCTTGTCATAACAATGGTTATGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR TCA 90 bp GCCTCTAATTCTTGCAAATTGAGAACAGGTGGAAGCTTCTCCAGCTCATATTTAAAGACCTGTCTGCAATaGGGTAACTCTTTCAAGTTC +
Preference number: 4 (lower is better)
Translates to: ASNSCKLRTGGSFSSSYLKTCLQ*GNSFKF
Trigger: GAACTTGAAAGAGTTACCTCATTGCAGACAGGTCTT...TAAATATGAGCTGGAGAAGCTTCCACCTGTTCTCAATTTGCAAGAATTAGAGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436177.5
ENST00000438395.5
ENST00000649152.1
CDS-3UTR TCA 90 bp GCCTCTAATTCTTGCAAATTGAGAACAGGTGGAAGCTTCTCCAGCTCATATTTAAGGCCTAAACTAGCTTaGGTAAAACCTTCCTTTGCA +
Preference number: 4 (lower is better)
Translates to: ASNSCKLRTGGSFSSSYLRPKLA*VKPSFA
Trigger: TGCAAAGGAAGGTTTTACTCAAGCTAGTTTAGGCCT...TAAATATGAGCTGGAGAAGCTTCCACCTGTTCTCAATTTGCAAGAATTAGAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436177.5
ENST00000649152.1
CDS-3UTR TCA 90 bp ATTCACCCTCACATTATGCTTATTAAGAACCAAGCTCAGAGGGTAGAAAAGTGCTGTGAATGGCTTGGGTaGAGTGCATATGAAGTTGAT +
Preference number: 4 (lower is better)
Translates to: IHPHIMLIKNQAQRVEKCCEWLG*SAYEVD
Trigger: ATCAACTTCATATGCACTTCACCCAAGCCATTCACA...GCACTTTTCTACCCTCTGAGCTTGGTTCTTAATAAGCATAATGTGAGGGTGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000305866.10
ENST00000441602.5
ENST00000544910.5
ENST00000649152.1
CDS-3UTR TCA 90 bp AACGGGGCTGAAAAACGATCAAGCTACAGGTTCACATATGGGACAAACTGTAACGTTTTTACTTTTAGCTaGACATCCTGCCATATTCGT +
Preference number: 4 (lower is better)
Translates to: NGAEKRSSYRFTYGTNCNVFTFS*TSCHIR
Trigger: ACGAATATGGCAGGATGTTCAGCTAAAAGTAAAAAC...GTTACAGTTTGTCCCATATGTGAACCTGTAGCTTGATCGTTTTTCAGCCCCGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000458707.1
CDS-3UTR TCA 90 bp TTTTATCACCTTAGGTCCCAGAAGACTCATAAGACCCAAGGCCTGTTTCTCACACTTGCATCAACCTGCTaGTTATATCCAAAACAAAGA +
Preference number: 4 (lower is better)
Translates to: FYHLRSQKTHKTQGLFLTLASTC*LYPKQR
Trigger: TCTTTGTTTTGGATATAATCAGCAGGTTGATGCAAG...TGTGAGAAACAGGCCTTGGGTCTTATGAGTCTTCTGGGACCTAAGGTGATAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR TCA 90 bp AACGGGGCTGAAAAACGATCAAGCTACAGGTTCACATATGGGACAAACTGTAACCAAGATGCTGAAATTTaGCTTAACAGGACAAAGTTC +
Preference number: 4 (lower is better)
Translates to: NGAEKRSSYRFTYGTNCNQDAEI*LNRTKF
Trigger: GAACTTTGTCCTGTTAAGTCAAATTTCAGCATCTTG...GTTACAGTTTGTCCCATATGTGAACCTGTAGCTTGATCGTTTTTCAGCCCCGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458707.1
CDS-3UTR TCA 90 bp AGTAGCAATTGTTTCCTTATCACCTCCATGCTTGATCACATGCCATTCTGTGCCCAAGATGCTGAAATTTaGCTTAACAGGACAAAGTTC +
Preference number: 4 (lower is better)
Translates to: SSNCFLITSMLDHMPFCAQDAEI*LNRTKF
Trigger: GAACTTTGTCCTGTTAAGTCAAATTTCAGCATCTTG...GGCACAGAATGGCATGTGATCAAGCATGGAGGTGATAAGGAAACAATTGCTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR TCA 90 bp AGAACAGGTGGAAGCTTCTCCAGCTCATATTTAACAATATCAAATGAATCCACAGCATCCAGATGTGGCTaGAGGAACTCAAACTGTTCA +
Preference number: 4 (lower is better)
Translates to: RTGGSFSSSYLTISNESTASRCG*RNSNCS
Trigger: TGAACAGTTTGAGTTCCTTCAGCCACATCTGGATGC...TGTGGATTCATTTGATATTGTTAAATATGAGCTGGAGAAGCTTCCACCTGTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649152.1
CDS-3UTR TCA 90 bp CATATTCTGAAAGTGCTTCACATTACACTGTGCATTTACAGACATCGCAGGGACTCAGGTCATATATGTTaGGTGAGGATCAATGCCATT +
Preference number: 4 (lower is better)
Translates to: HILKVLHITLCIYRHRRDSGHIC*VRINAI
Trigger: AATGGCATTGATCCTCACTCAACATATATGACCTGA...GTCCCTGCGATGTCTGTAAATGCACAGTGTAATGTGAAGCACTTTCAGAATATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR TCA 90 bp AATGGCTTGGGTGAAGTGCATATGAAGTTGATCCATTGCTGTCTGTGTTTTTCCTCAGGTCATATATGTTaGGTGAGGATCAATGCCATT +
Preference number: 4 (lower is better)
Translates to: NGLGEVHMKLIHCCLCFSSGHIC*VRINAI
Trigger: AATGGCATTGATCCTCACTCAACATATATGACCTGA...GGAAAAACACAGACAGCAATGGATCAACTTCATATGCACTTCACCCAAGCCATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
CDS-3UTR TCA 90 bp AAGAACACACACAAAATTCCTTATCAGACAGTTGGCAAGAGTACATGGAAAATGTATCACCTCCATGCTTaGTCACATGCCATTCTGTGC +
Preference number: 4 (lower is better)
Translates to: KNTHKIPYQTVGKSTWKMYHLHA*SHAILC
Trigger: GCACAGAATGGCATGTGATCAAGCATGGAGGTGATA...CATTTTCCATGTACTCTTGCCAACTGTCTGATAAGGAATTTTGTGTGTGTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR GCA 90 bp TCTAATTCTTGCAAATTGAGAACAGGTGGAAGCTTCTCCAGCTCATATTTAACACTGAGGAGGGTACCCTaGCTCAAAGAGCTAACAAAT +
Preference number: 4 (lower is better)
Translates to: SNSCKLRTGGSFSSSYLTLRRVP*LKELTN
Trigger: ATTTGTTAGCTCTTTGAGGCAGGGTACCCTCCTCAG...TGTTAAATATGAGCTGGAGAAGCTTCCACCTGTTCTCAATTTGCAAGAATTAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436177.5
ENST00000438395.5
ENST00000649152.1
CDS-3UTR GCA 90 bp TTTAGAGTTGTTCTTAGTCTACTACTACTAAGGCCGAGTCCAGTTGATTCCAATTGCTTTGCACAGGTCTaGAAGGCATGGAATATAGCT +
Preference number: 4 (lower is better)
Translates to: FRVVLSLLLLRPSPVDSNCFAQV*KAWNIA
Trigger: AGCTATATTCCATGCCTTGCAGACCTGTGCAAAGCA...ATTGGAATCAACTGGACTCGGCCTTAGTAGTAGTAGACTAAGAACAACTCTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
CDS-3UTR GCA 90 bp AGACTTGCTACCACAAAATTCTTCTCCAACTTGCATCAACCTGCTGATTATATCTGCTTTGCACAGGTCTaGAAGGCATGGAATATAGCT +
Preference number: 4 (lower is better)
Translates to: RLATTKFFSNLHQPADYICFAQV*KAWNIA
Trigger: AGCTATATTCCATGCCTTGCAGACCTGTGCAAAGCA...GATATAATCAGCAGGTTGATGCAAGTTGGAGAAGAATTTTGTGGTAGCAAGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
CDS-3UTR GCA 90 bp CATCACAGCATCCAGATGTGGCTGAAGGAACTCAAACTGTTCAGCCAAGAATACAATTCTTCTCCAACTTaGATCAACCTGCTGATTATA +
Preference number: 4 (lower is better)
Translates to: HHSIQMWLKELKLFSQEYNSSPT*INLLII
Trigger: TATAATCAGCAGGTTGATGCAAGTTGGAGAAGAATT...GTATTCTTGGCTGAACAGTTTGAGTTCCTTCAGCCACATCTGGATGCTGTGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
CDS-3UTR GCA 90 bp CTACTTAGAATCAAGCTGGAACTGCAGGAGTCAGAAACGGGGCTGAAAAACGATGTAAAACTTCAGACTTaGTACCACAAAATTCTTCTC +
Preference number: 4 (lower is better)
Translates to: LLRIKLELQESETGLKNDVKLQT*YHKILL
Trigger: GAGAAGAATTTTGTGGTAGCAAGTCTGAAGTTTTAC...ATCGTTTTTCAGCCCCGTTTCTGACTCCTGCAGTTCCAGCTTGATTCTAAGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000458707.1
CDS-3UTR GCA 90 bp CTTTTGTATCAATTCCTATTACCTTGGAAAACACTGGGCTCTACCAGGCAGGTGAATCTGATTTCTTCCTaGTTTTTAGAGTTTCCCGAG +
Preference number: 4 (lower is better)
Translates to: LLYQFLLPWKTLGSTRQVNLISS*FLEFPE
Trigger: CTCGGGAAACTCTAAAAAGCAGGAAGAAATCAGATT...CACCTGCCTGGTAGAGCCCAGTGTTTTCCAAGGTAATAGGAATTGATACAAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR GCA 90 bp AAGAACACACACAAAATTCCTTATCAGACAGTTGGCAAGAGTACATGGAAAATGAAAGGGCTTTTTGACTaGAGGCATCACAGCATCCAG +
Preference number: 4 (lower is better)
Translates to: KNTHKIPYQTVGKSTWKMKGLFD*RHHSIQ
Trigger: CTGGATGCTGTGATGCCTGCAGTCAAAAAGCCCTTT...CATTTTCCATGTACTCTTGCCAACTGTCTGATAAGGAATTTTGTGTGTGTTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR GCA 90 bp TACAGGTCATGCATGGCAATCATTGGACCAATGCCACACAAGCTTAGATGTCCTAGCCTCCTGTTAAACTaGTCAAATTCCTTTAATAGT +
Preference number: 4 (lower is better)
Translates to: YRSCMAIIGPMPHKLRCPSLLLN*SNSFNS
Trigger: ACTATTAAAGGAATTTGAGCAGTTTAACAGGAGGCT...AGGACATCTAAGCTTGTGTGGCATTGGTCCAATGATTGCCATGCATGACCTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CCA 90 bp ACACACAAAATTCCTTATCAGACAGTTGGCAAGAGTACATGGAAAATGGATTTTAGCTTGAGGGTCACTTaGCTGTTCTCGAAGTTCCCT +
Preference number: 4 (lower is better)
Translates to: THKIPYQTVGKSTWKMDFSLRVT*LFSKFP
Trigger: AGGGAACTTCGAGAACAGCCAAGTGACCCTCAAGCT...AAAATCCATTTTCCATGTACTCTTGCCAACTGTCTGATAAGGAATTTTGTGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CCA 90 bp ATTCACCCTCACATTATGCTTATTAAGAACCAAGCTCAGAGGGTAGAAAAGTGCCAAATTGAGAACAGGTaGAAGCTTCTCCAGCTCATA +
Preference number: 4 (lower is better)
Translates to: IHPHIMLIKNQAQRVEKCQIENR*KLLQLI
Trigger: TATGAGCTGGAGAAGCTTCCACCTGTTCTCAATTTG...GCACTTTTCTACCCTCTGAGCTTGGTTCTTAATAAGCATAATGTGAGGGTGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CCA 90 bp GTCATGCTTTTCATGCCATTCCATAGTCCTATAATAGCTGAGCATAACTTCCCACAAATTGAGAACAGGTaGAAGCTTCTCCAGCTCATA +
Preference number: 4 (lower is better)
Translates to: VMLFMPFHSPIIAEHNFPQIENR*KLLQLI
Trigger: TATGAGCTGGAGAAGCTTCCACCTGTTCTCAATTTG...TGGGAAGTTATGCTCAGCTATTATAGGACTATGGAATGGCATGAAAAGCATGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649152.1
CDS-3UTR CCA 90 bp CTCTCCAGTCAGAAAGAACACACACAAAATTCCTTATCAGACAGTTGGCAAGAGAATTCTTGCAGATTTTaGAAAGAGCTACGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: LSSQKEHTQNSLSDSWQENSCRF*KELRPA
Trigger: AGCTGGACGTAGCTCTTTCCAAAATCTGCAAGAATT...CTCTTGCCAACTGTCTGATAAGGAATTTTGTGTGTGTTCTTTCTGACTGGAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CCA 90 bp CCATTTCACATTAGCCATGAGAAGCAGCATCTGTTCATAATCAAGGGCTTTACCAATTCTTGCAGATTTTaGAAAGAGCTACGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: PFHISHEKQHLFIIKGFTNSCRF*KELRPA
Trigger: AGCTGGACGTAGCTCTTTCCAAAATCTGCAAGAATT...GGTAAAGCCCTTGATTATGAACAGATGCTGCTTCTCATGGCTAATGTGAAATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
CDS-3UTR CCA 90 bp TTCTTGCAGATTTTGGAAAGAGCTACGTCCAGCTGTTCCTCAATCTGTTCCAAATGGAATATAGCTGTCTaGTGTAACATGTGTACAGAG +
Preference number: 4 (lower is better)
Translates to: FLQILERATSSCSSICSKWNIAV*CNMCTE
Trigger: CTCTGTACACATGTTACACCAGACAGCTATATTCCA...TTTGGAACAGATTGAGGAACAGCTGGACGTAGCTCTTTCCAAAATCTGCAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
CDS-3UTR CCA 90 bp TCACATAACCATTGTTATGACAAGGCGGCAACATCATTTCAGATTACAACAAATGTTTCCGTAGTTCACTaGCGGTTGAGACTGTCTGAG +
Preference number: 4 (lower is better)
Translates to: SHNHCYDKAATSFQITTNVSVVH*RLRLSE
Trigger: CTCAGACAGTCTCAACCGCCAGTGAACTACGGAAAC...ATTTGTTGTAATCTGAAATGATGTTGCCGCCTTGTCATAACAATGGTTATGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CCA 90 bp ATTATGCTTATTAAGAACCAAGCTCAGAGGGTAGAAAAGTGCCAACTTCATTTTGTTTCCGTAGTTCACTaGCGGTTGAGACTGTCTGAG +
Preference number: 4 (lower is better)
Translates to: IMLIKNQAQRVEKCQLHFVSVVH*RLRLSE
Trigger: CTCAGACAGTCTCAACCGCCAGTGAACTACGGAAAC...AAAATGAAGTTGGCACTTTTCTACCCTCTGAGCTTGGTTCTTAATAAGCATAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CCA 90 bp CATATTCTGAAAGTGCTTCACATTACACTGTGCATTTACAGACATCGCAGGGACGCTTTCTTATTGATATaGGATCCCAGGCAAACATTC +
Preference number: 4 (lower is better)
Translates to: HILKVLHITLCIYRHRRDAFLLI*DPRQTF
Trigger: GAATGTTTGCCTGGGATCCCATATCAATAAGAAAGC...GTCCCTGCGATGTCTGTAAATGCACAGTGTAATGTGAAGCACTTTCAGAATATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CCA 90 bp CTTTTGTATCAATTCCTATTACCTTGGAAAACACTGGGCTCTACCAGGCAGGTGTCCTTATCAGACAGTTaGCAAGAGTACATGGAAAAT +
Preference number: 4 (lower is better)
Translates to: LLYQFLLPWKTLGSTRQVSLSDS*QEYMEN
Trigger: ATTTTCCATGTACTCTTGCCAACTGTCTGATAAGGA...CACCTGCCTGGTAGAGCCCAGTGTTTTCCAAGGTAATAGGAATTGATACAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR TCA 90 bp CAAACATATTCTGAAAGTGCTTCACATTACACTGTGCATTTACAGACATCGCAGTGTGAATGGCTTGGGTaGAGTGCATATGAAGTTGAT +
Preference number: 4 (lower is better)
Translates to: QTYSESASHYTVHLQTSQCEWLG*SAYEVD
Trigger: ATCAACTTCATATGCACTTCACCCAAGCCATTCACA...CTGCGATGTCTGTAAATGCACAGTGTAATGTGAAGCACTTTCAGAATATGTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR TCA 90 bp CTCTCCAGTCAGAAAGAACACACACAAAATTCCTTATCAGACAGTTGGCAAGAGGTTTTTACTTTTAGCTaGACATCCTGCCATATTCGT +
Preference number: 4 (lower is better)
Translates to: LSSQKEHTQNSLSDSWQEVFTFS*TSCHIR
Trigger: ACGAATATGGCAGGATGTTCAGCTAAAAGTAAAAAC...CTCTTGCCAACTGTCTGATAAGGAATTTTGTGTGTGTTCTTTCTGACTGGAGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR TCA 90 bp TTCTTGCAGATTTTGGAAAGAGCTACGTCCAGCTGTTCCTCAATCTGTTCCAAAGTTTTTACTTTTAGCTaGACATCCTGCCATATTCGT +
Preference number: 4 (lower is better)
Translates to: FLQILERATSSCSSICSKVFTFS*TSCHIR
Trigger: ACGAATATGGCAGGATGTTCAGCTAAAAGTAAAAAC...TTTGGAACAGATTGAGGAACAGCTGGACGTAGCTCTTTCCAAAATCTGCAAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
CDS-3UTR TCA 90 bp ATTATGCTTATTAAGAACCAAGCTCAGAGGGTAGAAAAGTGCCAACTTCATTTTGGTCAGCTGCTTCGTTaGATATTCCCTGTGCTCTTT +
Preference number: 4 (lower is better)
Translates to: IMLIKNQAQRVEKCQLHFGQLLR*IFPVLF
Trigger: AAAGAGCACAGGGAATATTCAACGAAGCAGCTGACC...AAAATGAAGTTGGCACTTTTCTACCCTCTGAGCTTGGTTCTTAATAAGCATAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000305866.10
ENST00000441602.5
ENST00000544910.5
ENST00000649152.1
CDS-3UTR TCA 90 bp AGACTTGCTACCACAAAATTCTTCTCCAACTTGCATCAACCTGCTGATTATATCGTCTTGCTTTCTTATTaGTATGGGATCCCAGGCAAA +
Preference number: 4 (lower is better)
Translates to: RLATTKFFSNLHQPADYIVLLSY*YGIPGK
Trigger: TTTGCCTGGGATCCCATATCAATAAGAAAGCAAGAC...GATATAATCAGCAGGTTGATGCAAGTTGGAGAAGAATTTTGTGGTAGCAAGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
CDS-3UTR TCA 90 bp TTTAGAGTTGTTCTTAGTCTACTACTACTAAGGCCGAGTCCAGTTGATTCCAATCCGTACATTTATGAGTaGCTAGCAGACAACTGTTTC +
Preference number: 4 (lower is better)
Translates to: FRVVLSLLLLRPSPVDSNPYIYE*LADNCF
Trigger: GAAACAGTTGTCTGCTAGTCACTCATAAATGTACGG...ATTGGAATCAACTGGACTCGGCCTTAGTAGTAGTAGACTAAGAACAACTCTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649152.1
CDS-3UTR TCA 90 bp TTTAGAGTTGTTCTTAGTCTACTACTACTAAGGCCGAGTCCAGTTGATTCCAATATGACCGTACATTTATaGGTGACTAGCAGACAACTG +
Preference number: 4 (lower is better)
Translates to: FRVVLSLLLLRPSPVDSNMTVHL*VTSRQL
Trigger: CAGTTGTCTGCTAGTCACTCATAAATGTACGGTCAT...ATTGGAATCAACTGGACTCGGCCTTAGTAGTAGTAGACTAAGAACAACTCTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649152.1
CDS-3UTR TCA 90 bp AGACTTGCTACCACAAAATTCTTCTCCAACTTGCATCAACCTGCTGATTATATCACAGCACATACTTACTaGAGACTAAGTGGATTCCAG +
Preference number: 4 (lower is better)
Translates to: RLATTKFFSNLHQPADYITAHTY*RLSGFQ
Trigger: CTGGAATCCACTTAGTCTTCAGTAAGTATGTGCTGT...GATATAATCAGCAGGTTGATGCAAGTTGGAGAAGAATTTTGTGGTAGCAAGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649152.1
CDS-3UTR TCA 90 bp ATGTATAACTGTAGTCACATAACCATTGTTATGACAAGGCGGCAACATCATTTCGATTCTGTGAGCTGTTaGTGTTACAGGTCATGCATG +
Preference number: 4 (lower is better)
Translates to: MYNCSHITIVMTRRQHHFDSVSC*CYRSCM
Trigger: CATGCATGACCTGTAACATCAACAGCTCACAGAATC...GAAATGATGTTGCCGCCTTGTCATAACAATGGTTATGTGACTACAGTTATACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR TCA 90 bp ACAAATCAGTTCCAAGCAAGTAGGTTTTTACTTTTAGCTGAACATCCTGCCATAGATTCTGTGAGCTGTTaGTGTTACAGGTCATGCATG +
Preference number: 4 (lower is better)
Translates to: TNQFQASRFLLLAEHPAIDSVSC*CYRSCM
Trigger: CATGCATGACCTGTAACATCAACAGCTCACAGAATC...TATGGCAGGATGTTCAGCTAAAAGTAAAAACCTACTTGCTTGGAACTGATTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649152.1
CDS-3UTR TCA 90 bp ATTATGCTTATTAAGAACCAAGCTCAGAGGGTAGAAAAGTGCCAACTTCATTTTTATCACCTCCATGCTTaGTCACATGCCATTCTGTGC +
Preference number: 4 (lower is better)
Translates to: IMLIKNQAQRVEKCQLHFYHLHA*SHAILC
Trigger: GCACAGAATGGCATGTGATCAAGCATGGAGGTGATA...AAAATGAAGTTGGCACTTTTCTACCCTCTGAGCTTGGTTCTTAATAAGCATAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR TCA 90 bp ATGTATAACTGTAGTCACATAACCATTGTTATGACAAGGCGGCAACATCATTTCGCTCTACCAGGCAGGTaGTTCCTGTTCATATTATCT +
Preference number: 4 (lower is better)
Translates to: MYNCSHITIVMTRRQHHFALPGR*FLFILS
Trigger: AGATAATATGAACAGGAATCACCTGCCTGGTAGAGC...GAAATGATGTTGCCGCCTTGTCATAACAATGGTTATGTGACTACAGTTATACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR TCA 90 bp AAGAACACACACAAAATTCCTTATCAGACAGTTGGCAAGAGTACATGGAAAATGGCTCTACCAGGCAGGTaGTTCCTGTTCATATTATCT +
Preference number: 4 (lower is better)
Translates to: KNTHKIPYQTVGKSTWKMALPGR*FLFILS
Trigger: AGATAATATGAACAGGAATCACCTGCCTGGTAGAGC...CATTTTCCATGTACTCTTGCCAACTGTCTGATAAGGAATTTTGTGTGTGTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR TCA 90 bp GTCATGCTTTTCATGCCATTCCATAGTCCTATAATAGCTGAGCATAACTTCCCACTGGTAACTCTCTTGTaGTTAGGTAACTTCATGACT +
Preference number: 4 (lower is better)
Translates to: VMLFMPFHSPIIAEHNFPLVTLL*LGNFMT
Trigger: AGTCATGAAGTTACCTAATCACAAGAGAGTTACCAG...TGGGAAGTTATGCTCAGCTATTATAGGACTATGGAATGGCATGAAAAGCATGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649152.1
CDS-3UTR GCA 90 bp CTTGATCACATGCCATTCTGTGCCATCCATTTTATCACCTTAGGTCCCAGAAGATGTTCCAAAGTATCTTaGAGCTTTGAATTCAGTTCA +
Preference number: 4 (lower is better)
Translates to: LDHMPFCAIHFITLGPRRCSKVS*SFEFSS
Trigger: TGAACTGAATTCAAAGCTGCAAGATACTTTGGAACA...TCTTCTGGGACCTAAGGTGATAAAATGGATGGCACAGAATGGCATGTGATCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR GCA 90 bp AACGGGGCTGAAAAACGATCAAGCTACAGGTTCACATATGGGACAAACTGTAACTGTTCCAAAGTATCTTaGAGCTTTGAATTCAGTTCA +
Preference number: 4 (lower is better)
Translates to: NGAEKRSSYRFTYGTNCNCSKVS*SFEFSS
Trigger: TGAACTGAATTCAAAGCTGCAAGATACTTTGGAACA...GTTACAGTTTGTCCCATATGTGAACCTGTAGCTTGATCGTTTTTCAGCCCCGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458707.1
CDS-3UTR GCA 90 bp CACATAGTCTCGTTTGAGTTCCTCAGGAACATCACTGTCACTGTCATACTCTTGGTAAAACTTCAGACTTaGTACCACAAAATTCTTCTC +
Preference number: 4 (lower is better)
Translates to: HIVSFEFLRNITVTVILLVKLQT*YHKILL
Trigger: GAGAAGAATTTTGTGGTAGCAAGTCTGAAGTTTTAC...CAAGAGTATGACAGTGACAGTGATGTTCCTGAGGAACTCAAACGAGACTATGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
CDS-3UTR GCA 90 bp TCACATAACCATTGTTATGACAAGGCGGCAACATCATTTCAGATTACAACAAATAAAGGGCTTTTTGACTaGAGGCATCACAGCATCCAG +
Preference number: 4 (lower is better)
Translates to: SHNHCYDKAATSFQITTNKGLFD*RHHSIQ
Trigger: CTGGATGCTGTGATGCCTGCAGTCAAAAAGCCCTTT...ATTTGTTGTAATCTGAAATGATGTTGCCGCCTTGTCATAACAATGGTTATGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000305866.10
ENST00000441602.5
ENST00000544910.5
ENST00000649152.1
CDS-3UTR GCA 90 bp TCCTTAGGATTCTGTGAGCTGTTGATGTTACAGGTCATGCATGGCAATCATTGGAATCATGATTCTGTATaGTACTCAGGCATTGAAAAG +
Preference number: 4 (lower is better)
Translates to: SLGFCELLMLQVMHGNHWNHDSV*YSGIEK
Trigger: CTTTTCAATGCCTGAGTAGCATACAGAATCATGATT...CCAATGATTGCCATGCATGACCTGTAACATCAACAGCTCACAGAATCCTAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR GCA 90 bp TGTTATGACAAGGCGGCAACATCATTTCAGATTACAACAAATGAGACCAAAAGTCCATGCTTGATCACATaGCATTCTGTGCCATCCATT +
Preference number: 4 (lower is better)
Translates to: CYDKAATSFQITTNETKSPCLIT*HSVPSI
Trigger: AATGGATGGCACAGAATGGCATGTGATCAAGCATGG...ACTTTTGGTCTCATTTGTTGTAATCTGAAATGATGTTGCCGCCTTGTCATAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR GCA 90 bp TCTAATTCTTGCAAATTGAGAACAGGTGGAAGCTTCTCCAGCTCATATTTAACACCATGCTTGATCACATaGCATTCTGTGCCATCCATT +
Preference number: 4 (lower is better)
Translates to: SNSCKLRTGGSFSSSYLTPCLIT*HSVPSI
Trigger: AATGGATGGCACAGAATGGCATGTGATCAAGCATGG...TGTTAAATATGAGCTGGAGAAGCTTCCACCTGTTCTCAATTTGCAAGAATTAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649152.1
CDS-3UTR GCA 90 bp CAGGGCACGACCCTCATTACTGCATTTCTTGACATTGGCATATCCTTCTACAATAATGCTAATTTACCATaGTCCCATGGTAAATTCTAC +
Preference number: 4 (lower is better)
Translates to: QGTTLITAFLDIGISFYNNANLP*SHGKFY
Trigger: GTAGAATTTACCATGGGAGCATGGTAAATTAGCATT...ATTGTAGAAGGATATGCCAATGTCAAGAAATGCAGTAATGAGGGTCGTGCCCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649152.1
CDS-3UTR CCA 90 bp AATTCTCATGCAGTGCTCATAATTAGGAGATACTACATATTCACCCTCACATTAACTGAGGTGTGGACTTaGCACCTTCTCCTTTCTTTC +
Preference number: 4 (lower is better)
Translates to: NSHAVLIIRRYYIFTLTLTEVWT*HLLLSF
Trigger: GAAAGAAAGGAGAAGGTGCCAAGTCCACACCTCAGT...TAATGTGAGGGTGAATATGTAGTATCTCCTAATTATGAGCACTGCATGAGAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000305866.10
ENST00000441602.5
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CCA 90 bp TTCCTTATCAGACAGTTGGCAAGAGTACATGGAAAATGGATTTTTATGTCACATATACCAAGGATTCCGTaGCTACCACTCTTTCTGCCA +
Preference number: 4 (lower is better)
Translates to: FLIRQLARVHGKWIFMSHIPRIP*LPLFLP
Trigger: TGGCAGAAAGAGTGGTAGCCACGGAATCCTTGGTAT...ATGTGACATAAAAATCCATTTTCCATGTACTCTTGCCAACTGTCTGATAAGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CCA 90 bp TCACATAACCATTGTTATGACAAGGCGGCAACATCATTTCAGATTACAACAAATCACAGCATCCAGATGTaGCTGAAGGAACTCAAACTG +
Preference number: 4 (lower is better)
Translates to: SHNHCYDKAATSFQITTNHSIQM*LKELKL
Trigger: CAGTTTGAGTTCCTTCAGCCACATCTGGATGCTGTG...ATTTGTTGTAATCTGAAATGATGTTGCCGCCTTGTCATAACAATGGTTATGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000305866.10
ENST00000441602.5
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CCA 90 bp CAGTTCCAAGCAAGTAGGTTTTTACTTTTAGCTGAACATCCTGCCATATTCGTGAAACATTCACCAGATTaGTCAGCTGCTTCGTTGAAT +
Preference number: 4 (lower is better)
Translates to: QFQASRFLLLAEHPAIFVKHSPD*SAASLN
Trigger: ATTCAACGAAGCAGCTGACCAATCTGGTGAATGTTT...CACGAATATGGCAGGATGTTCAGCTAAAAGTAAAAACCTACTTGCTTGGAACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
CDS-3UTR CCA 90 bp ATTCACCCTCACATTATGCTTATTAAGAACCAAGCTCAGAGGGTAGAAAAGTGCGCTTTCTTATTGATATaGGATCCCAGGCAAACATTC +
Preference number: 4 (lower is better)
Translates to: IHPHIMLIKNQAQRVEKCAFLLI*DPRQTF
Trigger: GAATGTTTGCCTGGGATCCCATATCAATAAGAAAGC...GCACTTTTCTACCCTCTGAGCTTGGTTCTTAATAAGCATAATGTGAGGGTGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000305866.10
ENST00000441602.5
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CCA 90 bp ATGTATAACTGTAGTCACATAACCATTGTTATGACAAGGCGGCAACATCATTTCATGCATGGCAATCATTaGACCAATGCCACACAAGCT +
Preference number: 4 (lower is better)
Translates to: MYNCSHITIVMTRRQHHFMHGNH*TNATQA
Trigger: AGCTTGTGTGGCATTGGTCCAATGATTGCCATGCAT...GAAATGATGTTGCCGCCTTGTCATAACAATGGTTATGTGACTACAGTTATACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CCA 90 bp CAAACATATTCTGAAAGTGCTTCACATTACACTGTGCATTTACAGACATCGCAGCAATTCCTATTACCTTaGAAAACACTGGGCTCTACC +
Preference number: 4 (lower is better)
Translates to: QTYSESASHYTVHLQTSQQFLLP*KTLGST
Trigger: GGTAGAGCCCAGTGTTTTCCAAGGTAATAGGAATTG...CTGCGATGTCTGTAAATGCACAGTGTAATGTGAAGCACTTTCAGAATATGTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CCA 90 bp CTTGATCACATGCCATTCTGTGCCATCCATTTTATCACCTTAGGTCCCAGAAGAAATACCATATGGCCCTaGTTTCAAGAGAAATTCATT +
Preference number: 4 (lower is better)
Translates to: LDHMPFCAIHFITLGPRRNTIWP*FQEKFI
Trigger: AATGAATTTCTCTTGAAACCAGGGCCATATGGTATT...TCTTCTGGGACCTAAGGTGATAAAATGGATGGCACAGAATGGCATGTGATCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305866.10
ENST00000544910.5
3UTR CAA 72 bp GAGTTCCTCAGGAACATCACTGTCACTGTCATACTCTaGATAGGCACTCTTTTCTTGTTCATCAGATTCATA +
Preference number: 4 (lower is better)
Translates to: EFLRNITVTVIL*IGTLFLFIRFI
Trigger: TATGAATCTGATGAACAAGAAAAGAGTGCCTATCAAGAGTATGACAGTGACAGTGATGTTCCTGAGGAACTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
CDS-3UTR TCA 90 bp TTTAGAGTTGTTCTTAGTCTACTACTACTAAGGCCGAGTCCAGTTGATTCCAATCTAATTCTTGCAAATTaGGAACAGGTGGAAGCTTCT +
Preference number: 4 (lower is better)
Translates to: FRVVLSLLLLRPSPVDSNLILAN*EQVEAS
Trigger: AGAAGCTTCCACCTGTTCTCAATTTGCAAGAATTAG...ATTGGAATCAACTGGACTCGGCCTTAGTAGTAGTAGACTAAGAACAACTCTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649152.1
CDS-3UTR TCA 90 bp TCTAATTCTTGCAAATTGAGAACAGGTGGAAGCTTCTCCAGCTCATATTTAACAAAGACCTGTCTGCAATaGGGTAACTCTTTCAAGTTC +
Preference number: 4 (lower is better)
Translates to: SNSCKLRTGGSFSSSYLTKTCLQ*GNSFKF
Trigger: GAACTTGAAAGAGTTACCTCATTGCAGACAGGTCTT...TGTTAAATATGAGCTGGAGAAGCTTCCACCTGTTCTCAATTTGCAAGAATTAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436177.5
ENST00000438395.5
ENST00000649152.1
CDS-3UTR TCA 90 bp AAGAACACACACAAAATTCCTTATCAGACAGTTGGCAAGAGTACATGGAAAATGAAGACCTGTCTGCAATaGGGTAACTCTTTCAAGTTC +
Preference number: 4 (lower is better)
Translates to: KNTHKIPYQTVGKSTWKMKTCLQ*GNSFKF
Trigger: GAACTTGAAAGAGTTACCTCATTGCAGACAGGTCTT...CATTTTCCATGTACTCTTGCCAACTGTCTGATAAGGAATTTTGTGTGTGTTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR TCA 90 bp TCTAATTCTTGCAAATTGAGAACAGGTGGAAGCTTCTCCAGCTCATATTTAACAAGGCCTAAACTAGCTTaGGTAAAACCTTCCTTTGCA +
Preference number: 4 (lower is better)
Translates to: SNSCKLRTGGSFSSSYLTRPKLA*VKPSFA
Trigger: TGCAAAGGAAGGTTTTACTCAAGCTAGTTTAGGCCT...TGTTAAATATGAGCTGGAGAAGCTTCCACCTGTTCTCAATTTGCAAGAATTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436177.5
ENST00000649152.1
CDS-3UTR TCA 90 bp AAGAACACACACAAAATTCCTTATCAGACAGTTGGCAAGAGTACATGGAAAATGTGTGAATGGCTTGGGTaGAGTGCATATGAAGTTGAT +
Preference number: 4 (lower is better)
Translates to: KNTHKIPYQTVGKSTWKMCEWLG*SAYEVD
Trigger: ATCAACTTCATATGCACTTCACCCAAGCCATTCACA...CATTTTCCATGTACTCTTGCCAACTGTCTGATAAGGAATTTTGTGTGTGTTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR TCA 90 bp AAGAACACACACAAAATTCCTTATCAGACAGTTGGCAAGAGTACATGGAAAATGTCCGACATGAGAGGATaGAAAGAAAACACTCAGCAT +
Preference number: 4 (lower is better)
Translates to: KNTHKIPYQTVGKSTWKMSDMRG*KENTQH
Trigger: ATGCTGAGTGTTTTCTTTTCATCCTCTCATGTCGGA...CATTTTCCATGTACTCTTGCCAACTGTCTGATAAGGAATTTTGTGTGTGTTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR TCA 90 bp CAAACATATTCTGAAAGTGCTTCACATTACACTGTGCATTTACAGACATCGCAGGTTCTCGAAGTTCCCTaGATTCTTCCAAAGTTAACA +
Preference number: 4 (lower is better)
Translates to: QTYSESASHYTVHLQTSQVLEVP*ILPKLT
Trigger: TGTTAACTTTGGAAGAATTCAGGGAACTTCGAGAAC...CTGCGATGTCTGTAAATGCACAGTGTAATGTGAAGCACTTTCAGAATATGTTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544910.5
CDS-3UTR GCA 90 bp TTTCTTATTGATATGGGATCCCAGGCAAACATTCACCAGATTGGTCAGCTGCTTTGTTCCAAAGTATCTTaGAGCTTTGAATTCAGTTCA +
Preference number: 4 (lower is better)
Translates to: FLIDMGSQANIHQIGQLLCSKVS*SFEFSS
Trigger: TGAACTGAATTCAAAGCTGCAAGATACTTTGGAACA...AAGCAGCTGACCAATCTGGTGAATGTTTGCCTGGGATCCCATATCAATAAGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
CDS-3UTR GCA 90 bp TTCTTGCAGATTTTGGAAAGAGCTACGTCCAGCTGTTCCTCAATCTGTTCCAAATGTTCCAAAGTATCTTaGAGCTTTGAATTCAGTTCA +
Preference number: 4 (lower is better)
Translates to: FLQILERATSSCSSICSKCSKVS*SFEFSS
Trigger: TGAACTGAATTCAAAGCTGCAAGATACTTTGGAACA...TTTGGAACAGATTGAGGAACAGCTGGACGTAGCTCTTTCCAAAATCTGCAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
CDS-3UTR GCA 90 bp ATTATGCTTATTAAGAACCAAGCTCAGAGGGTAGAAAAGTGCCAACTTCATTTTTGCTTTGCACAGGTCTaGAAGGCATGGAATATAGCT +
Preference number: 4 (lower is better)
Translates to: IMLIKNQAQRVEKCQLHFCFAQV*KAWNIA
Trigger: AGCTATATTCCATGCCTTGCAGACCTGTGCAAAGCA...AAAATGAAGTTGGCACTTTTCTACCCTCTGAGCTTGGTTCTTAATAAGCATAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000305866.10
ENST00000441602.5
ENST00000544910.5
ENST00000649152.1
CDS-3UTR GCA 90 bp CATATTCTGAAAGTGCTTCACATTACACTGTGCATTTACAGACATCGCAGGGACGTAAAACTTCAGACTTaGTACCACAAAATTCTTCTC +
Preference number: 4 (lower is better)
Translates to: HILKVLHITLCIYRHRRDVKLQT*YHKILL
Trigger: GAGAAGAATTTTGTGGTAGCAAGTCTGAAGTTTTAC...GTCCCTGCGATGTCTGTAAATGCACAGTGTAATGTGAAGCACTTTCAGAATATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR GCA 90 bp CTCTCCAGTCAGAAAGAACACACACAAAATTCCTTATCAGACAGTTGGCAAGAGGTAAAACTTCAGACTTaGTACCACAAAATTCTTCTC +
Preference number: 4 (lower is better)
Translates to: LSSQKEHTQNSLSDSWQEVKLQT*YHKILL
Trigger: GAGAAGAATTTTGTGGTAGCAAGTCTGAAGTTTTAC...CTCTTGCCAACTGTCTGATAAGGAATTTTGTGTGTGTTCTTTCTGACTGGAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR GCA 90 bp TTCCTTATCAGACAGTTGGCAAGAGTACATGGAAAATGGATTTTTATGTCACATCCACCACTACAGTACTaGTCAAACAAGGTCACTGTT +
Preference number: 4 (lower is better)
Translates to: FLIRQLARVHGKWIFMSHPPLQY*SNKVTV
Trigger: AACAGTGACCTTGTTTGAGCAGTACTGTAGTGGTGG...ATGTGACATAAAAATCCATTTTCCATGTACTCTTGCCAACTGTCTGATAAGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR GCA 90 bp ATTCACCCTCACATTATGCTTATTAAGAACCAAGCTCAGAGGGTAGAAAAGTGCAATCTGATTTCTTCCTaGTTTTTAGAGTTTCCCGAG +
Preference number: 4 (lower is better)
Translates to: IHPHIMLIKNQAQRVEKCNLISS*FLEFPE
Trigger: CTCGGGAAACTCTAAAAAGCAGGAAGAAATCAGATT...GCACTTTTCTACCCTCTGAGCTTGGTTCTTAATAAGCATAATGTGAGGGTGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000305866.10
ENST00000441602.5
ENST00000544910.5
ENST00000649152.1
CDS-3UTR GCA 90 bp CAGTTCCAAGCAAGTAGGTTTTTACTTTTAGCTGAACATCCTGCCATATTCGTGAATCTGATTTCTTCCTaGTTTTTAGAGTTTCCCGAG +
Preference number: 4 (lower is better)
Translates to: QFQASRFLLLAEHPAIFVNLISS*FLEFPE
Trigger: CTCGGGAAACTCTAAAAAGCAGGAAGAAATCAGATT...CACGAATATGGCAGGATGTTCAGCTAAAAGTAAAAACCTACTTGCTTGGAACTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
CDS-3UTR GCA 90 bp AGAGTAGCAATTGTTTCCTTATCACCTCCATGCTTGATCACATGCCATTCTGTGAGCCTCCTGTTAAACTaGTCAAATTCCTTTAATAGT +
Preference number: 4 (lower is better)
Translates to: RVAIVSLSPPCLITCHSVSLLLN*SNSFNS
Trigger: ACTATTAAAGGAATTTGAGCAGTTTAACAGGAGGCT...CACAGAATGGCATGTGATCAAGCATGGAGGTGATAAGGAAACAATTGCTACTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR GCA 90 bp TTCTTGCAGATTTTGGAAAGAGCTACGTCCAGCTGTTCCTCAATCTGTTCCAAAAGCCTCCTGTTAAACTaGTCAAATTCCTTTAATAGT +
Preference number: 4 (lower is better)
Translates to: FLQILERATSSCSSICSKSLLLN*SNSFNS
Trigger: ACTATTAAAGGAATTTGAGCAGTTTAACAGGAGGCT...TTTGGAACAGATTGAGGAACAGCTGGACGTAGCTCTTTCCAAAATCTGCAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
CDS-3UTR GCA 90 bp AATTCTCATGCAGTGCTCATAATTAGGAGATACTACATATTCACCCTCACATTAGTTGAATATTCCCTGTaGTCTTTGATCCACCGTTCC +
Preference number: 4 (lower is better)
Translates to: NSHAVLIIRRYYIFTLTLVEYSL*SLIHRS
Trigger: GGAACGGTGGATCAAAGAGCACAGGGAATATTCAAC...TAATGTGAGGGTGAATATGTAGTATCTCCTAATTATGAGCACTGCATGAGAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000305866.10
ENST00000441602.5
ENST00000544910.5
ENST00000649152.1
CDS-3UTR GCA 90 bp AATTCTTGCAAATTGAGAACAGGTGGAAGCTTCTCCAGCTCATATTTAACAATAGTTGAATATTCCCTGTaGTCTTTGATCCACCGTTCC +
Preference number: 4 (lower is better)
Translates to: NSCKLRTGGSFSSSYLTIVEYSL*SLIHRS
Trigger: GGAACGGTGGATCAAAGAGCACAGGGAATATTCAAC...TATTGTTAAATATGAGCTGGAGAAGCTTCCACCTGTTCTCAATTTGCAAGAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649152.1
CDS-3UTR GCA 90 bp ATTCACCCTCACATTATGCTTATTAAGAACCAAGCTCAGAGGGTAGAAAAGTGCGAACACACTAAAAGCTaGACTATAGTTCATGACATC +
Preference number: 4 (lower is better)
Translates to: IHPHIMLIKNQAQRVEKCEHTKS*TIVHDI
Trigger: GATGTCATGAACTATAGTGCAGCTTTTAGTGTGTTC...GCACTTTTCTACCCTCTGAGCTTGGTTCTTAATAAGCATAATGTGAGGGTGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR GCA 90 bp TTCCTTATCAGACAGTTGGCAAGAGTACATGGAAAATGGATTTTTATGTCACATCCATGCTTGATCACATaGCATTCTGTGCCATCCATT +
Preference number: 4 (lower is better)
Translates to: FLIRQLARVHGKWIFMSHPCLIT*HSVPSI
Trigger: AATGGATGGCACAGAATGGCATGTGATCAAGCATGG...ATGTGACATAAAAATCCATTTTCCATGTACTCTTGCCAACTGTCTGATAAGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR GCA 90 bp AGAGTAGCAATTGTTTCCTTATCACCTCCATGCTTGATCACATGCCATTCTGTGAATGCTAATTTACCATaGTCCCATGGTAAATTCTAC +
Preference number: 4 (lower is better)
Translates to: RVAIVSLSPPCLITCHSVNANLP*SHGKFY
Trigger: GTAGAATTTACCATGGGAGCATGGTAAATTAGCATT...CACAGAATGGCATGTGATCAAGCATGGAGGTGATAAGGAAACAATTGCTACTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CCA 90 bp ATTCACCCTCACATTATGCTTATTAAGAACCAAGCTCAGAGGGTAGAAAAGTGCCTTCATCTTTGTGGTTaGCCTGAATTTCAAATGGAT +
Preference number: 4 (lower is better)
Translates to: IHPHIMLIKNQAQRVEKCLHLCG*PEFQMD
Trigger: ATCCATTTGAAATTCAGGCCAACCACAAAGATGAAG...GCACTTTTCTACCCTCTGAGCTTGGTTCTTAATAAGCATAATGTGAGGGTGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000305866.10
ENST00000441602.5
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CCA 90 bp AGAGTAGCAATTGTTTCCTTATCACCTCCATGCTTGATCACATGCCATTCTGTGTTACTGAAGACTAAGTaGATTCCAGAGTTCATCATT +
Preference number: 4 (lower is better)
Translates to: RVAIVSLSPPCLITCHSVLLKTK*IPEFII
Trigger: AATGATGAACTCTGGAATCCACTTAGTCTTCAGTAA...CACAGAATGGCATGTGATCAAGCATGGAGGTGATAAGGAAACAATTGCTACTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CCA 90 bp CTCTCCAGTCAGAAAGAACACACACAAAATTCCTTATCAGACAGTTGGCAAGAGTTACTGAAGACTAAGTaGATTCCAGAGTTCATCATT +
Preference number: 4 (lower is better)
Translates to: LSSQKEHTQNSLSDSWQELLKTK*IPEFII
Trigger: AATGATGAACTCTGGAATCCACTTAGTCTTCAGTAA...CTCTTGCCAACTGTCTGATAAGGAATTTTGTGTGTGTTCTTTCTGACTGGAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CCA 90 bp AGAGTAGCAATTGTTTCCTTATCACCTCCATGCTTGATCACATGCCATTCTGTGGTTGGCAAGAGTACATaGAAAATGGATTTTTATGTC +
Preference number: 4 (lower is better)
Translates to: RVAIVSLSPPCLITCHSVVGKST*KMDFYV
Trigger: GACATAAAAATCCATTTTCCATGTACTCTTGCCAAC...CACAGAATGGCATGTGATCAAGCATGGAGGTGATAAGGAAACAATTGCTACTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CCA 90 bp CTACAGTACTGCTCAAACAAGGTCACTGTTTTTGAAGAAGTTGAGACTGGCTGTGTTGGCAAGAGTACATaGAAAATGGATTTTTATGTC +
Preference number: 4 (lower is better)
Translates to: LQYCSNKVTVFEEVETGCVGKST*KMDFYV
Trigger: GACATAAAAATCCATTTTCCATGTACTCTTGCCAAC...ACAGCCAGTCTCAACTTCTTCAAAAACAGTGACCTTGTTTGAGCAGTACTGTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000649152.1
CDS-3UTR CCA 90 bp ATGTATAACTGTAGTCACATAACCATTGTTATGACAAGGCGGCAACATCATTTCCAATTCCTATTACCTTaGAAAACACTGGGCTCTACC +
Preference number: 4 (lower is better)
Translates to: MYNCSHITIVMTRRQHHFQFLLP*KTLGST
Trigger: GGTAGAGCCCAGTGTTTTCCAAGGTAATAGGAATTG...GAAATGATGTTGCCGCCTTGTCATAACAATGGTTATGTGACTACAGTTATACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
3UTR CAA 72 bp AAGATAAGTAATTCTTTTGTATCAATTCCTATTACCTaGGAAAACACTGGGCTCTACCAGGCAGGTGATTCC +
Preference number: 4 (lower is better)
Translates to: KISNSFVSIPIT*ENTGLYQAGDS
Trigger: GGAATCACCTGCCTGGTAGAGCCCAGTGTTTTCCAAGGTAATAGGAATTGATACAAAAGAATTACTTATCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR TCA 90 bp TCTAATTCTTGCAAATTGAGAACAGGTGGAAGCTTCTCCAGCTCATATTTAACACTAATTCTTGCAAATTaGGAACAGGTGGAAGCTTCT +
Preference number: 4 (lower is better)
Translates to: SNSCKLRTGGSFSSSYLTLILAN*EQVEAS
Trigger: AGAAGCTTCCACCTGTTCTCAATTTGCAAGAATTAG...TGTTAAATATGAGCTGGAGAAGCTTCCACCTGTTCTCAATTTGCAAGAATTAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436177.5
ENST00000438395.5
ENST00000649152.1
CDS-3UTR TCA 90 bp CTCATTGTCATGCTTTTCATGCCATTCCATAGTCCTATAATAGCTGAGCATAACGTTTTTACTTTTAGCTaGACATCCTGCCATATTCGT +
Preference number: 4 (lower is better)
Translates to: LIVMLFMPFHSPIIAEHNVFTFS*TSCHIR
Trigger: ACGAATATGGCAGGATGTTCAGCTAAAAGTAAAAAC...GTTATGCTCAGCTATTATAGGACTATGGAATGGCATGAAAAGCATGACAATGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
CDS-3UTR TCA 90 bp CTCATTGTCATGCTTTTCATGCCATTCCATAGTCCTATAATAGCTGAGCATAACCTTGCATCAACCTGCTaGTTATATCCAAAACAAAGA +
Preference number: 4 (lower is better)
Translates to: LIVMLFMPFHSPIIAEHNLASTC*LYPKQR
Trigger: TCTTTGTTTTGGATATAATCAGCAGGTTGATGCAAG...GTTATGCTCAGCTATTATAGGACTATGGAATGGCATGAAAAGCATGACAATGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
CDS-3UTR TCA 90 bp AATTCTCATGCAGTGCTCATAATTAGGAGATACTACATATTCACCCTCACATTATCTTTGTGGTTGGCCTaGATTTCAAATGGATTCCCA +
Preference number: 4 (lower is better)
Translates to: NSHAVLIIRRYYIFTLTLSLWLA*ISNGFP
Trigger: TGGGAATCCATTTGAAATTCAGGCCAACCACAAAGA...TAATGTGAGGGTGAATATGTAGTATCTCCTAATTATGAGCACTGCATGAGAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000305866.10
ENST00000441602.5
ENST00000544910.5
ENST00000649152.1
CDS-3UTR TCA 90 bp ACAGGTGGAAGCTTCTCCAGCTCATATTTAACAATATCAAATGAATCCACAGAATCAGGTCATATATGTTaGGTGAGGATCAATGCCATT +
Preference number: 4 (lower is better)
Translates to: TGGSFSSSYLTISNESTESGHIC*VRINAI
Trigger: AATGGCATTGATCCTCACTCAACATATATGACCTGA...TTCTGTGGATTCATTTGATATTGTTAAATATGAGCTGGAGAAGCTTCCACCTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649152.1
CDS-3UTR TCA 90 bp ATGTATAACTGTAGTCACATAACCATTGTTATGACAAGGCGGCAACATCATTTCCTGGTAACTCTCTTGTaGTTAGGTAACTTCATGACT +
Preference number: 4 (lower is better)
Translates to: MYNCSHITIVMTRRQHHFLVTLL*LGNFMT
Trigger: AGTCATGAAGTTACCTAATCACAAGAGAGTTACCAG...GAAATGATGTTGCCGCCTTGTCATAACAATGGTTATGTGACTACAGTTATACAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR GCA 90 bp TCTAATTCTTGCAAATTGAGAACAGGTGGAAGCTTCTCCAGCTCATATTTAACATACGCCTCTAATTCTTaGAAATTGAGAACAGGTGGA +
Preference number: 4 (lower is better)
Translates to: SNSCKLRTGGSFSSSYLTYASNS*KLRTGG
Trigger: TCCACCTGTTCTCAATTTGCAAGAATTAGAGGCGTA...TGTTAAATATGAGCTGGAGAAGCTTCCACCTGTTCTCAATTTGCAAGAATTAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436177.5
ENST00000438395.5
ENST00000649152.1
CDS-3UTR GCA 90 bp ACAGGTGGAAGCTTCTCCAGCTCATATTTAACAATATCAAATGAATCCACAGAATACGCCTCTAATTCTTaGAAATTGAGAACAGGTGGA +
Preference number: 4 (lower is better)
Translates to: TGGSFSSSYLTISNESTEYASNS*KLRTGG
Trigger: TCCACCTGTTCTCAATTTGCAAGAATTAGAGGCGTA...TTCTGTGGATTCATTTGATATTGTTAAATATGAGCTGGAGAAGCTTCCACCTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436177.5
ENST00000438395.5
ENST00000649152.1
CDS-3UTR GCA 90 bp AGACTTGCTACCACAAAATTCTTCTCCAACTTGCATCAACCTGCTGATTATATCATGAAGTTGATCCATTaGTGTCTGTGTTTTTCCAAG +
Preference number: 4 (lower is better)
Translates to: RLATTKFFSNLHQPADYIMKLIH*CLCFSK
Trigger: CTTGGAAAAACACAGACAGCAATGGATCAACTTCAT...GATATAATCAGCAGGTTGATGCAAGTTGGAGAAGAATTTTGTGGTAGCAAGTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
CDS-3UTR GCA 90 bp AATTTGTCTCTATACGCCTCTAATTCTTGCAAATTGAGAACAGGTGGAAGCTTCATGAAGTTGATCCATTaGTGTCTGTGTTTTTCCAAG +
Preference number: 4 (lower is better)
Translates to: NLSLYASNSCKLRTGGSFMKLIH*CLCFSK
Trigger: CTTGGAAAAACACAGACAGCAATGGATCAACTTCAT...GAAGCTTCCACCTGTTCTCAATTTGCAAGAATTAGAGGCGTATAGAGACAAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649152.1
CDS-3UTR GCA 90 bp GTCATGCTTTTCATGCCATTCCATAGTCCTATAATAGCTGAGCATAACTTCCCAAATTCTTCTCCAACTTaGATCAACCTGCTGATTATA +
Preference number: 4 (lower is better)
Translates to: VMLFMPFHSPIIAEHNFPNSSPT*INLLII
Trigger: TATAATCAGCAGGTTGATGCAAGTTGGAGAAGAATT...TGGGAAGTTATGCTCAGCTATTATAGGACTATGGAATGGCATGAAAAGCATGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
CDS-3UTR GCA 90 bp CAGTTCCAAGCAAGTAGGTTTTTACTTTTAGCTGAACATCCTGCCATATTCGTGGTAAAACTTCAGACTTaGTACCACAAAATTCTTCTC +
Preference number: 4 (lower is better)
Translates to: QFQASRFLLLAEHPAIFVVKLQT*YHKILL
Trigger: GAGAAGAATTTTGTGGTAGCAAGTCTGAAGTTTTAC...CACGAATATGGCAGGATGTTCAGCTAAAAGTAAAAACCTACTTGCTTGGAACTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
CDS-3UTR GCA 90 bp AATTCTCATGCAGTGCTCATAATTAGGAGATACTACATATTCACCCTCACATTATCCTTATCACCTCCATaGTTGATCACATGCCATTCT +
Preference number: 4 (lower is better)
Translates to: NSHAVLIIRRYYIFTLTLSLSPP*LITCHS
Trigger: AGAATGGCATGTGATCAAGCATGGAGGTGATAAGGA...TAATGTGAGGGTGAATATGTAGTATCTCCTAATTATGAGCACTGCATGAGAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CCA 90 bp TTCCTTATCAGACAGTTGGCAAGAGTACATGGAAAATGGATTTTTATGTCACATCAAATTGAGAACAGGTaGAAGCTTCTCCAGCTCATA +
Preference number: 4 (lower is better)
Translates to: FLIRQLARVHGKWIFMSHQIENR*KLLQLI
Trigger: TATGAGCTGGAGAAGCTTCCACCTGTTCTCAATTTG...ATGTGACATAAAAATCCATTTTCCATGTACTCTTGCCAACTGTCTGATAAGGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CCA 90 bp AAGAACACACACAAAATTCCTTATCAGACAGTTGGCAAGAGTACATGGAAAATGTGGAATATAGCTGTCTaGTGTAACATGTGTACAGAG +
Preference number: 4 (lower is better)
Translates to: KNTHKIPYQTVGKSTWKMWNIAV*CNMCTE
Trigger: CTCTGTACACATGTTACACCAGACAGCTATATTCCA...CATTTTCCATGTACTCTTGCCAACTGTCTGATAAGGAATTTTGTGTGTGTTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CCA 90 bp TGTTATGACAAGGCGGCAACATCATTTCAGATTACAACAAATGAGACCAAAAGTAAACATTCACCAGATTaGTCAGCTGCTTCGTTGAAT +
Preference number: 4 (lower is better)
Translates to: CYDKAATSFQITTNETKSKHSPD*SAASLN
Trigger: ATTCAACGAAGCAGCTGACCAATCTGGTGAATGTTT...ACTTTTGGTCTCATTTGTTGTAATCTGAAATGATGTTGCCGCCTTGTCATAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000305866.10
ENST00000441602.5
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CCA 90 bp AGAACAGGTGGAAGCTTCTCCAGCTCATATTTAACAATATCAAATGAATCCACAGCTTTCTTATTGATATaGGATCCCAGGCAAACATTC +
Preference number: 4 (lower is better)
Translates to: RTGGSFSSSYLTISNESTAFLLI*DPRQTF
Trigger: GAATGTTTGCCTGGGATCCCATATCAATAAGAAAGC...TGTGGATTCATTTGATATTGTTAAATATGAGCTGGAGAAGCTTCCACCTGTTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649152.1
CDS-3UTR TCA 90 bp AATTCTCATGCAGTGCTCATAATTAGGAGATACTACATATTCACCCTCACATTACTAATTCTTGCAAATTaGGAACAGGTGGAAGCTTCT +
Preference number: 4 (lower is better)
Translates to: NSHAVLIIRRYYIFTLTLLILAN*EQVEAS
Trigger: AGAAGCTTCCACCTGTTCTCAATTTGCAAGAATTAG...TAATGTGAGGGTGAATATGTAGTATCTCCTAATTATGAGCACTGCATGAGAATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR TCA 90 bp ATGTATAACTGTAGTCACATAACCATTGTTATGACAAGGCGGCAACATCATTTCGTTTTTACTTTTAGCTaGACATCCTGCCATATTCGT +
Preference number: 4 (lower is better)
Translates to: MYNCSHITIVMTRRQHHFVFTFS*TSCHIR
Trigger: ACGAATATGGCAGGATGTTCAGCTAAAAGTAAAAAC...GAAATGATGTTGCCGCCTTGTCATAACAATGGTTATGTGACTACAGTTATACAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000305866.10
ENST00000441602.5
ENST00000544910.5
ENST00000649152.1
CDS-3UTR TCA 90 bp AAGAACACACACAAAATTCCTTATCAGACAGTTGGCAAGAGTACATGGAAAATGCTTGCATCAACCTGCTaGTTATATCCAAAACAAAGA +
Preference number: 4 (lower is better)
Translates to: KNTHKIPYQTVGKSTWKMLASTC*LYPKQR
Trigger: TCTTTGTTTTGGATATAATCAGCAGGTTGATGCAAG...CATTTTCCATGTACTCTTGCCAACTGTCTGATAAGGAATTTTGTGTGTGTTCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR TCA 90 bp ACAAATCAGTTCCAAGCAAGTAGGTTTTTACTTTTAGCTGAACATCCTGCCATACTTGCATCAACCTGCTaGTTATATCCAAAACAAAGA +
Preference number: 4 (lower is better)
Translates to: TNQFQASRFLLLAEHPAILASTC*LYPKQR
Trigger: TCTTTGTTTTGGATATAATCAGCAGGTTGATGCAAG...TATGGCAGGATGTTCAGCTAAAAGTAAAAACCTACTTGCTTGGAACTGATTTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
CDS-3UTR TCA 90 bp AATTCTTGCAAATTGAGAACAGGTGGAAGCTTCTCCAGCTCATATTTAACAATAGTTCTCGAAGTTCCCTaGATTCTTCCAAAGTTAACA +
Preference number: 4 (lower is better)
Translates to: NSCKLRTGGSFSSSYLTIVLEVP*ILPKLT
Trigger: TGTTAACTTTGGAAGAATTCAGGGAACTTCGAGAAC...TATTGTTAAATATGAGCTGGAGAAGCTTCCACCTGTTCTCAATTTGCAAGAATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438395.5
CDS-3UTR CCA 90 bp ATTATGCTTATTAAGAACCAAGCTCAGAGGGTAGAAAAGTGCCAACTTCATTTTAATTCTTGCAGATTTTaGAAAGAGCTACGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: IMLIKNQAQRVEKCQLHFNSCRF*KELRPA
Trigger: AGCTGGACGTAGCTCTTTCCAAAATCTGCAAGAATT...AAAATGAAGTTGGCACTTTTCTACCCTCTGAGCTTGGTTCTTAATAAGCATAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000305866.10
ENST00000441602.5
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CCA 90 bp AATTCTTGCAAATTGAGAACAGGTGGAAGCTTCTCCAGCTCATATTTAACAATATGGAATATAGCTGTCTaGTGTAACATGTGTACAGAG +
Preference number: 4 (lower is better)
Translates to: NSCKLRTGGSFSSSYLTIWNIAV*CNMCTE
Trigger: CTCTGTACACATGTTACACCAGACAGCTATATTCCA...TATTGTTAAATATGAGCTGGAGAAGCTTCCACCTGTTCTCAATTTGCAAGAATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649152.1
CDS-3UTR CCA 90 bp TGTTATGACAAGGCGGCAACATCATTTCAGATTACAACAAATGAGACCAAAAGTCTTCATCTTTGTGGTTaGCCTGAATTTCAAATGGAT +
Preference number: 4 (lower is better)
Translates to: CYDKAATSFQITTNETKSLHLCG*PEFQMD
Trigger: ATCCATTTGAAATTCAGGCCAACCACAAAGATGAAG...ACTTTTGGTCTCATTTGTTGTAATCTGAAATGATGTTGCCGCCTTGTCATAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000305866.10
ENST00000441602.5
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CCA 90 bp TCTAATTCTTGCAAATTGAGAACAGGTGGAAGCTTCTCCAGCTCATATTTAACACTTCATCTTTGTGGTTaGCCTGAATTTCAAATGGAT +
Preference number: 4 (lower is better)
Translates to: SNSCKLRTGGSFSSSYLTLHLCG*PEFQMD
Trigger: ATCCATTTGAAATTCAGGCCAACCACAAAGATGAAG...TGTTAAATATGAGCTGGAGAAGCTTCCACCTGTTCTCAATTTGCAAGAATTAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649152.1
CDS-3UTR CCA 90 bp ACACACAAAATTCCTTATCAGACAGTTGGCAAGAGTACATGGAAAATGGATTTTAAACATTCACCAGATTaGTCAGCTGCTTCGTTGAAT +
Preference number: 4 (lower is better)
Translates to: THKIPYQTVGKSTWKMDFKHSPD*SAASLN
Trigger: ATTCAACGAAGCAGCTGACCAATCTGGTGAATGTTT...AAAATCCATTTTCCATGTACTCTTGCCAACTGTCTGATAAGGAATTTTGTGTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CCA 90 bp TGTTATGACAAGGCGGCAACATCATTTCAGATTACAACAAATGAGACCAAAAGTTCCTTATCAGACAGTTaGCAAGAGTACATGGAAAAT +
Preference number: 4 (lower is better)
Translates to: CYDKAATSFQITTNETKSSLSDS*QEYMEN
Trigger: ATTTTCCATGTACTCTTGCCAACTGTCTGATAAGGA...ACTTTTGGTCTCATTTGTTGTAATCTGAAATGATGTTGCCGCCTTGTCATAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CCA 90 bp ACAGGTGGAAGCTTCTCCAGCTCATATTTAACAATATCAAATGAATCCACAGAATCCTTATCAGACAGTTaGCAAGAGTACATGGAAAAT +
Preference number: 4 (lower is better)
Translates to: TGGSFSSSYLTISNESTESLSDS*QEYMEN
Trigger: ATTTTCCATGTACTCTTGCCAACTGTCTGATAAGGA...TTCTGTGGATTCATTTGATATTGTTAAATATGAGCTGGAGAAGCTTCCACCTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649152.1
CDS-3UTR TCA 90 bp AATTCTCATGCAGTGCTCATAATTAGGAGATACTACATATTCACCCTCACATTACAAGATGCTGAAATTTaGCTTAACAGGACAAAGTTC +
Preference number: 4 (lower is better)
Translates to: NSHAVLIIRRYYIFTLTLQDAEI*LNRTKF
Trigger: GAACTTTGTCCTGTTAAGTCAAATTTCAGCATCTTG...TAATGTGAGGGTGAATATGTAGTATCTCCTAATTATGAGCACTGCATGAGAATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000305866.10
ENST00000441602.5
ENST00000544910.5
ENST00000649152.1
CDS-3UTR GCA 90 bp TCACATAACCATTGTTATGACAAGGCGGCAACATCATTTCAGATTACAACAAATATGAAGTTGATCCATTaGTGTCTGTGTTTTTCCAAG +
Preference number: 4 (lower is better)
Translates to: SHNHCYDKAATSFQITTNMKLIH*CLCFSK
Trigger: CTTGGAAAAACACAGACAGCAATGGATCAACTTCAT...ATTTGTTGTAATCTGAAATGATGTTGCCGCCTTGTCATAACAATGGTTATGTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000305866.10
ENST00000441602.5
ENST00000544910.5
ENST00000649152.1
CDS-3UTR GCA 90 bp TGTTATGACAAGGCGGCAACATCATTTCAGATTACAACAAATGAGACCAAAAGTAATTCTTCTCCAACTTaGATCAACCTGCTGATTATA +
Preference number: 4 (lower is better)
Translates to: CYDKAATSFQITTNETKSNSSPT*INLLII
Trigger: TATAATCAGCAGGTTGATGCAAGTTGGAGAAGAATT...ACTTTTGGTCTCATTTGTTGTAATCTGAAATGATGTTGCCGCCTTGTCATAACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000305866.10
ENST00000441602.5
ENST00000544910.5
ENST00000649152.1
CDS-3UTR GCA 90 bp ATTATGCTTATTAAGAACCAAGCTCAGAGGGTAGAAAAGTGCCAACTTCATTTTGAACACACTAAAAGCTaGACTATAGTTCATGACATC +
Preference number: 4 (lower is better)
Translates to: IMLIKNQAQRVEKCQLHFEHTKS*TIVHDI
Trigger: GATGTCATGAACTATAGTGCAGCTTTTAGTGTGTTC...AAAATGAAGTTGGCACTTTTCTACCCTCTGAGCTTGGTTCTTAATAAGCATAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CCA 90 bp ATGTATAACTGTAGTCACATAACCATTGTTATGACAAGGCGGCAACATCATTTCTTACTGAAGACTAAGTaGATTCCAGAGTTCATCATT +
Preference number: 4 (lower is better)
Translates to: MYNCSHITIVMTRRQHHFLLKTK*IPEFII
Trigger: AATGATGAACTCTGGAATCCACTTAGTCTTCAGTAA...GAAATGATGTTGCCGCCTTGTCATAACAATGGTTATGTGACTACAGTTATACAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
3UTR CAA 72 bp CATTGCTGTCTGTGTTTTTCCAAGAAGTCGATAAGCTaGTTGAACCTTGGTATAATGGTTAATGTCAAAATT +
Preference number: 4 (lower is better)
Translates to: HCCLCFSKKSIS*LNLGIMVNVKI
Trigger: AATTTTGACATTAACCATTATACCAAGGTTCAACAAGCTTATCGACTTCTTGGAAAAACACAGACAGCAATG
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
CDS-3UTR GCA 90 bp ATTATGCTTATTAAGAACCAAGCTCAGAGGGTAGAAAAGTGCCAACTTCATTTTTGTTCCAAAGTATCTTaGAGCTTTGAATTCAGTTCA +
Preference number: 4 (lower is better)
Translates to: IMLIKNQAQRVEKCQLHFCSKVS*SFEFSS
Trigger: TGAACTGAATTCAAAGCTGCAAGATACTTTGGAACA...AAAATGAAGTTGGCACTTTTCTACCCTCTGAGCTTGGTTCTTAATAAGCATAAT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000305866.10
ENST00000441602.5
ENST00000544910.5
ENST00000649152.1
CDS-3UTR GCA 90 bp TTCCTTATCAGACAGTTGGCAAGAGTACATGGAAAATGGATTTTTATGTCACATAATTCTTCTCCAACTTaGATCAACCTGCTGATTATA +
Preference number: 4 (lower is better)
Translates to: FLIRQLARVHGKWIFMSHNSSPT*INLLII
Trigger: TATAATCAGCAGGTTGATGCAAGTTGGAGAAGAATT...ATGTGACATAAAAATCCATTTTCCATGTACTCTTGCCAACTGTCTGATAAGGAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR GCA 90 bp AATTCTCATGCAGTGCTCATAATTAGGAGATACTACATATTCACCCTCACATTAAGCCTCCTGTTAAACTaGTCAAATTCCTTTAATAGT +
Preference number: 4 (lower is better)
Translates to: NSHAVLIIRRYYIFTLTLSLLLN*SNSFNS
Trigger: ACTATTAAAGGAATTTGAGCAGTTTAACAGGAGGCT...TAATGTGAGGGTGAATATGTAGTATCTCCTAATTATGAGCACTGCATGAGAATT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000305866.10
ENST00000441602.5
ENST00000544910.5
ENST00000649152.1
CDS-3UTR GCA 90 bp ACACACAAAATTCCTTATCAGACAGTTGGCAAGAGTACATGGAAAATGGATTTTAATCATGATTCTGTATaGTACTCAGGCATTGAAAAG +
Preference number: 4 (lower is better)
Translates to: THKIPYQTVGKSTWKMDFNHDSV*YSGIEK
Trigger: CTTTTCAATGCCTGAGTAGCATACAGAATCATGATT...AAAATCCATTTTCCATGTACTCTTGCCAACTGTCTGATAAGGAATTTTGTGTGT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR GCA 90 bp TTCCTTATCAGACAGTTGGCAAGAGTACATGGAAAATGGATTTTTATGTCACATAATGCTAATTTACCATaGTCCCATGGTAAATTCTAC +
Preference number: 4 (lower is better)
Translates to: FLIRQLARVHGKWIFMSHNANLP*SHGKFY
Trigger: GTAGAATTTACCATGGGAGCATGGTAAATTAGCATT...ATGTGACATAAAAATCCATTTTCCATGTACTCTTGCCAACTGTCTGATAAGGAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CCA 90 bp ACACACAAAATTCCTTATCAGACAGTTGGCAAGAGTACATGGAAAATGGATTTTAATACCATATGGCCCTaGTTTCAAGAGAAATTCATT +
Preference number: 4 (lower is better)
Translates to: THKIPYQTVGKSTWKMDFNTIWP*FQEKFI
Trigger: AATGAATTTCTCTTGAAACCAGGGCCATATGGTATT...AAAATCCATTTTCCATGTACTCTTGCCAACTGTCTGATAAGGAATTTTGTGTGT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000305866.10
ENST00000544910.5
CDS-3UTR CAA 90 bp AACGGGGCTGAAAAACGATCAAGCTACAGGTTCACATATGGGACAAACTGTAACAGGCAGGAGAATGGCTaGAACCCGGGAGGCGGAGCT +
Preference number: 5 (lower is better)
Translates to: NGAEKRSSYRFTYGTNCNRQENG*NPGGGA
Trigger: AGCTCCGCCTCCCGGGTTCAAGCCATTCTCCTGCCT...GTTACAGTTTGTCCCATATGTGAACCTGTAGCTTGATCGTTTTTCAGCCCCGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458707.1
CDS GCA 90 bp GGCCTTAAACTGCTGATCAAGAGAAGCACACCCTGTGTATTCAAATaGCTTTCCAGGGACCCGGAGACTCTCTATGGCACCAAGATCACT +
Preference number: 5 (lower is better)
Translates to: GLKLLIKRSTPCVFK*LSRDPETLYGTKIT
Trigger: AGTGATCTTGGTGCCATAGAGAGTCTCCGGGTCCCTGGAAAGGCATTTGAATACACAGGGTGTGCTTCTCTTGATCAGCAGTTTAAGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649152.1
CDS-3UTR CAA 90 bp ACCACTCTTTCTGCCAACCCATACAGCGTATCCCCAGATGTCAAAACCACTAGGTATTCCCTGTGCTCTTaGATCCACCGTTCCATGTCA +
Preference number: 5 (lower is better)
Translates to: TTLSANPYSVSPDVKTTRYSLCS*IHRSMS
Trigger: TGACATGGAACGGTGGATCAAAGAGCACAGGGAATA...CCTAGTGGTTTTGACATCTGGGGATACGCTGTATGGGTTGGCAGAAAGAGTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
CDS-3UTR CAA 90 bp CTACTTAGAATCAAGCTGGAACTGCAGGAGTCAGAAACGGGGCTGAAAAACGATACTTCCCATAGTGCTTaGCACAGGTCTGCAAGGCAT +
Preference number: 5 (lower is better)
Translates to: LLRIKLELQESETGLKNDTSHSA*HRSARH
Trigger: ATGCCTTGCAGACCTGTGCAAAGCACTATGGGAAGT...ATCGTTTTTCAGCCCCGTTTCTGACTCCTGCAGTTCCAGCTTGATTCTAAGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458707.1
CDS-3UTR CAA 90 bp CAAGCTGGAACTGCAGGAGTCAGAAACGGGGCTGAAAAACGATCAAGCTACAGGGTCACTGTCATACTCTaGATAGGCACTCTTTTCTTG +
Preference number: 5 (lower is better)
Translates to: QAGTAGVRNGAEKRSSYRVTVIL*IGTLFL
Trigger: CAAGAAAAGAGTGCCTATCAAGAGTATGACAGTGAC...CCTGTAGCTTGATCGTTTTTCAGCCCCGTTTCTGACTCCTGCAGTTCCAGCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000458707.1
CDS-3UTR CAA 90 bp CTGTTGATGTTACAGGTCATGCATGGCAATCATTGGACCAATGCCACACAAGCTCTGTTGAAAATCCAATaGCATCAGGGCACGACCCTC +
Preference number: 5 (lower is better)
Translates to: LLMLQVMHGNHWTNATQALLKIQ*HQGTTL
Trigger: GAGGGTCGTGCCCTGATGCAATTGGATTTTCAACAG...AGCTTGTGTGGCATTGGTCCAATGATTGCCATGCATGACCTGTAACATCAACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CAA 90 bp TTGGACCAATGCCACACAAGCTTAGATGTCCTCCACTCTCCAGTCAGAAAGAACTGGTCAGCTGCTTCGTaGAATATTCCCTGTGCTCTT +
Preference number: 5 (lower is better)
Translates to: LDQCHTSLDVLHSPVRKNWSAAS*NIPCAL
Trigger: AAGAGCACAGGGAATATTCAACGAAGCAGCTGACCA...GTTCTTTCTGACTGGAGAGTGGAGGACATCTAAGCTTGTGTGGCATTGGTCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CAA 90 bp ACCACTCTTTCTGCCAACCCATACAGCGTATCCCCAGATGTCAAAACCACTAGGCAAACATTCACCAGATaGGTCAGCTGCTTCGTTGAA +
Preference number: 5 (lower is better)
Translates to: TTLSANPYSVSPDVKTTRQTFTR*VSCFVE
Trigger: TTCAACGAAGCAGCTGACCAATCTGGTGAATGTTTG...CCTAGTGGTTTTGACATCTGGGGATACGCTGTATGGGTTGGCAGAAAGAGTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
CDS-3UTR CAA 90 bp CTGTTGATGTTACAGGTCATGCATGGCAATCATTGGACCAATGCCACACAAGCTCATGCATGGCAATCATaGGACCAATGCCACACAAGC +
Preference number: 5 (lower is better)
Translates to: LLMLQVMHGNHWTNATQAHAWQS*DQCHTS
Trigger: GCTTGTGTGGCATTGGTCCAATGATTGCCATGCATG...AGCTTGTGTGGCATTGGTCCAATGATTGCCATGCATGACCTGTAACATCAACAG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CAA 90 bp CTTTTGTATCAATTCCTATTACCTTGGAAAACACTGGGCTCTACCAGGCAGGTGAAGCTCTTGTTCAGCTaGAGGGTCACTTGGCTGTTC +
Preference number: 5 (lower is better)
Translates to: LLYQFLLPWKTLGSTRQVKLLFS*RVTWLF
Trigger: GAACAGCCAAGTGACCCTCAAGCTGAACAAGAGCTT...CACCTGCCTGGTAGAGCCCAGTGTTTTCCAAGGTAATAGGAATTGATACAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CAA 90 bp CATCACAGCATCCAGATGTGGCTGAAGGAACTCAAACTGTTCAGCCAAGAATACAGTGCTGGCAGCTTTTaGACATTCAAGGCACAACTG +
Preference number: 5 (lower is better)
Translates to: HHSIQMWLKELKLFSQEYSAGSF*TFKAQL
Trigger: CAGTTGTGCCTTGAATGTCAAAAAGCTGCCAGCACT...GTATTCTTGGCTGAACAGTTTGAGTTCCTTCAGCCACATCTGGATGCTGTGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
CDS-3UTR CAA 90 bp GGAACTGCAGGAGTCAGAAACGGGGCTGAAAAACGATCAAGCTACAGGTTCACAAAATTCTTGCAGATTTaGGAAAGAGCTACGTCCAGC +
Preference number: 5 (lower is better)
Translates to: GTAGVRNGAEKRSSYRFTKFLQI*ERATSS
Trigger: GCTGGACGTAGCTCTTTCCAAAATCTGCAAGAATTT...TGTGAACCTGTAGCTTGATCGTTTTTCAGCCCCGTTTCTGACTCCTGCAGTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000458707.1
CDS-3UTR CAA 90 bp GATCAAGCTACAGGTTCACATATGGGACAAACTGTAACAGTCTGCATTCCCCACGGTGTTGTGAATGGCTaGGGTGAAGTGCATATGAAG +
Preference number: 5 (lower is better)
Translates to: DQATGSHMGQTVTVCIPHGVVNG*GEVHMK
Trigger: CTTCATATGCACTTCACCCAAGCCATTCACAACACC...GTGGGGAATGCAGACTGTTACAGTTTGTCCCATATGTGAACCTGTAGCTTGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458707.1
CDS-3UTR CAA 90 bp CACATAGTCTCGTTTGAGTTCCTCAGGAACATCACTGTCACTGTCATACTCTTGACTTCCCATAGTGCTTaGCACAGGTCTGCAAGGCAT +
Preference number: 5 (lower is better)
Translates to: HIVSFEFLRNITVTVILLTSHSA*HRSARH
Trigger: ATGCCTTGCAGACCTGTGCAAAGCACTATGGGAAGT...CAAGAGTATGACAGTGACAGTGATGTTCCTGAGGAACTCAAACGAGACTATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
CDS-3UTR CAA 90 bp CATCACAGCATCCAGATGTGGCTGAAGGAACTCAAACTGTTCAGCCAAGAATACGTAGTTCACTGGCGGTaGAGACTGTCTGAGAATAGA +
Preference number: 5 (lower is better)
Translates to: HHSIQMWLKELKLFSQEYVVHWR*RLSENR
Trigger: TCTATTCTCAGACAGTCTCAACCGCCAGTGAACTAC...GTATTCTTGGCTGAACAGTTTGAGTTCCTTCAGCCACATCTGGATGCTGTGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649152.1
CDS-3UTR CAA 90 bp CATCACAGCATCCAGATGTGGCTGAAGGAACTCAAACTGTTCAGCCAAGAATACTGGTCAGCTGCTTCGTaGAATATTCCCTGTGCTCTT +
Preference number: 5 (lower is better)
Translates to: HHSIQMWLKELKLFSQEYWSAAS*NIPCAL
Trigger: AAGAGCACAGGGAATATTCAACGAAGCAGCTGACCA...GTATTCTTGGCTGAACAGTTTGAGTTCCTTCAGCCACATCTGGATGCTGTGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
CDS-3UTR CAA 90 bp TTTTATCACCTTAGGTCCCAGAAGACTCATAAGACCCAAGGCCTGTTTCTCACACATGCATGGCAATCATaGGACCAATGCCACACAAGC +
Preference number: 5 (lower is better)
Translates to: FYHLRSQKTHKTQGLFLTHAWQS*DQCHTS
Trigger: GCTTGTGTGGCATTGGTCCAATGATTGCCATGCATG...TGTGAGAAACAGGCCTTGGGTCTTATGAGTCTTCTGGGACCTAAGGTGATAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS CCA 90 bp CACTCCCTCACAGTAGCCATGTCTCAAGTACTCAGTAGTTTCATGTaGCTAATGGCTATTGCATGGGACAGCACAGATTATGAACAGTTC +
Preference number: 5 (lower is better)
Translates to: HSLTVAMSQVLSSFM*LMAIAWDSTDYEQF
Trigger: GAACTGTTCATAATCTGTGCTGTCCCATGCAATAGCCATTAGCCACATGAAACTACTGAGTACTTGAGACATGGCTACTGTGAGGGAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480943.5
CDS-3UTR CAA 90 bp CTCTCCAGTCAGAAAGAACACACACAAAATTCCTTATCAGACAGTTGGCAAGAGATCACTGAGGCTTTCTaGAGGGCTTTTCAGACCCTG +
Preference number: 5 (lower is better)
Translates to: LSSQKEHTQNSLSDSWQEITEAF*RAFQTL
Trigger: CAGGGTCTGAAAAGCCCTCAAGAAAGCCTCAGTGAT...CTCTTGCCAACTGTCTGATAAGGAATTTTGTGTGTGTTCTTTCTGACTGGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CAA 90 bp CAAACATATTCTGAAAGTGCTTCACATTACACTGTGCATTTACAGACATCGCAGCAGCTTGAGGGTCACTaGGCTGTTCTCGAAGTTCCC +
Preference number: 5 (lower is better)
Translates to: QTYSESASHYTVHLQTSQQLEGH*AVLEVP
Trigger: GGGAACTTCGAGAACAGCCAAGTGACCCTCAAGCTG...CTGCGATGTCTGTAAATGCACAGTGTAATGTGAAGCACTTTCAGAATATGTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CAA 90 bp CATATTCTGAAAGTGCTTCACATTACACTGTGCATTTACAGACATCGCAGGGACAAGCTCTTGTTCAGCTaGAGGGTCACTTGGCTGTTC +
Preference number: 5 (lower is better)
Translates to: HILKVLHITLCIYRHRRDKLLFS*RVTWLF
Trigger: GAACAGCCAAGTGACCCTCAAGCTGAACAAGAGCTT...GTCCCTGCGATGTCTGTAAATGCACAGTGTAATGTGAAGCACTTTCAGAATATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CAA 90 bp AATGGCTTGGGTGAAGTGCATATGAAGTTGATCCATTGCTGTCTGTGTTTTTCCACTTCCCATAGTGCTTaGCACAGGTCTGCAAGGCAT +
Preference number: 5 (lower is better)
Translates to: NGLGEVHMKLIHCCLCFSTSHSA*HRSARH
Trigger: ATGCCTTGCAGACCTGTGCAAAGCACTATGGGAAGT...GGAAAAACACAGACAGCAATGGATCAACTTCATATGCACTTCACCCAAGCCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
CDS-3UTR CAA 90 bp ATCAAGCTGGAACTGCAGGAGTCAGAAACGGGGCTGAAAAACGATCAAGCTACAGAAGCAGTATCCTCATaGTCATGCTTTTCATGCCAT +
Preference number: 5 (lower is better)
Translates to: IKLELQESETGLKNDQATEAVSS*SCFSCH
Trigger: ATGGCATGAAAAGCATGACAATGAGGATACTGCTTC...TGTAGCTTGATCGTTTTTCAGCCCCGTTTCTGACTCCTGCAGTTCCAGCTTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000458707.1
CDS-3UTR CAA 90 bp ATCAAGCTGGAACTGCAGGAGTCAGAAACGGGGCTGAAAAACGATCAAGCTACAACAAGGTCACTGTTTTaGAAGAAGTTGAGACTGGCT +
Preference number: 5 (lower is better)
Translates to: IKLELQESETGLKNDQATTRSLF*KKLRLA
Trigger: AGCCAGTCTCAACTTCTTCAAAAACAGTGACCTTGT...TGTAGCTTGATCGTTTTTCAGCCCCGTTTCTGACTCCTGCAGTTCCAGCTTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000458707.1
CDS-3UTR CAA 90 bp CTCTCCAGTCAGAAAGAACACACACAAAATTCCTTATCAGACAGTTGGCAAGAGCTGTTGAAAATCCAATaGCATCAGGGCACGACCCTC +
Preference number: 5 (lower is better)
Translates to: LSSQKEHTQNSLSDSWQELLKIQ*HQGTTL
Trigger: GAGGGTCGTGCCCTGATGCAATTGGATTTTCAACAG...CTCTTGCCAACTGTCTGATAAGGAATTTTGTGTGTGTTCTTTCTGACTGGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CAA 90 bp AATGGCTTGGGTGAAGTGCATATGAAGTTGATCCATTGCTGTCTGTGTTTTTCCCTGTTGAAAATCCAATaGCATCAGGGCACGACCCTC +
Preference number: 5 (lower is better)
Translates to: NGLGEVHMKLIHCCLCFSLLKIQ*HQGTTL
Trigger: GAGGGTCGTGCCCTGATGCAATTGGATTTTCAACAG...GGAAAAACACAGACAGCAATGGATCAACTTCATATGCACTTCACCCAAGCCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
CDS-3UTR CAA 90 bp TTGGACCAATGCCACACAAGCTTAGATGTCCTCCACTCTCCAGTCAGAAAGAACTGTCTTGCTTTCTTATaGATATGGGATCCCAGGCAA +
Preference number: 5 (lower is better)
Translates to: LDQCHTSLDVLHSPVRKNCLAFL*IWDPRQ
Trigger: TTGCCTGGGATCCCATATCAATAAGAAAGCAAGACA...GTTCTTTCTGACTGGAGAGTGGAGGACATCTAAGCTTGTGTGGCATTGGTCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CAA 90 bp CCCGAGAAACACTTTTCACAGGACCATCTCCTGTCTGCTCATCCACATAGTCTCTTCAGGTCATATATGTaGAGTGAGGATCAATGCCAT +
Preference number: 5 (lower is better)
Translates to: PEKHFSQDHLLSAHPHSLFRSYM*SEDQCH
Trigger: ATGGCATTGATCCTCACTCAACATATATGACCTGAA...GAGACTATGTGGATGAGCAGACAGGAGATGGTCCTGTGAAAAGTGTTTCTCGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
CDS-3UTR CAA 90 bp ACATTCAAGGCACAACTGAATAGCTCCTGGATAATCTTCCTCCTCCAGCATTTCGTAGTTCACTGGCGGTaGAGACTGAGAATAGAACTG +
Preference number: 5 (lower is better)
Translates to: TFKAQLNSSWIIFLLQHFVVHWR*RLRIEL
Trigger: CAGTTCTATTCTCAGTCTCAACCGCCAGTGAACTAC...GAAATGCTGGAGGAGGAAGATTATCCAGGAGCTATTCAGTTGTGCCTTGAATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441602.5
CDS TCA 90 bp GAGAGAACCACTGATTCAGTTACACAGCCATGTAGTCAACAGGAGTaGTGCAGTCTAATTTGTGGTCGGGAAAACTCATCGGACTTCAAA +
Preference number: 5 (lower is better)
Translates to: ERTTDSVTQPCSQQE*CSLICGRENSSDFK
Trigger: TTTGAAGTCCGATGAGTTTTCCCGACCACAAATTAGACTGCATCACTCCTGTTGACTACATGGCTGTGTAACTGAATCAGTGGTTCTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471188.5
CDS GCA 90 bp TCTGCATATATTTTCCGCACAGTCTCTGTGGCAACAATTCTGCTCTaGTGTCTTCTGTTTCAACTGCTCAACTATGCCACTGTAGCACAA +
Preference number: 5 (lower is better)
Translates to: SAYIFRTVSVATILL*CLLFQLLNYATVAQ
Trigger: TTGTGCTACAGTGGCATAGTTGAGCAGTTGAAACAGAAGACAGCAGAGCAGAATTGTTGCCACAGAGACTGTGCGGAAAATATATGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467326.5
CDS-3UTR CAA 90 bp ATTCACCCTCACATTATGCTTATTAAGAACCAAGCTCAGAGGGTAGAAAAGTGCATCACTGAGGCTTTCTaGAGGGCTTTTCAGACCCTG +
Preference number: 5 (lower is better)
Translates to: IHPHIMLIKNQAQRVEKCITEAF*RAFQTL
Trigger: CAGGGTCTGAAAAGCCCTCAAGAAAGCCTCAGTGAT...GCACTTTTCTACCCTCTGAGCTTGGTTCTTAATAAGCATAATGTGAGGGTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000305866.10
ENST00000441602.5
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CAA 90 bp TGTTATGACAAGGCGGCAACATCATTTCAGATTACAACAAATGAGACCAAAAGTCAGCTTGAGGGTCACTaGGCTGTTCTCGAAGTTCCC +
Preference number: 5 (lower is better)
Translates to: CYDKAATSFQITTNETKSQLEGH*AVLEVP
Trigger: GGGAACTTCGAGAACAGCCAAGTGACCCTCAAGCTG...ACTTTTGGTCTCATTTGTTGTAATCTGAAATGATGTTGCCGCCTTGTCATAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CAA 90 bp GGAACTGCAGGAGTCAGAAACGGGGCTGAAAAACGATCAAGCTACAGGTTCACAAAGAAGTCGATAAGCTaGTTGAACCTTGGTATAATG +
Preference number: 5 (lower is better)
Translates to: GTAGVRNGAEKRSSYRFTKKSIS*LNLGIM
Trigger: CATTATACCAAGGTTCAACAAGCTTATCGACTTCTT...TGTGAACCTGTAGCTTGATCGTTTTTCAGCCCCGTTTCTGACTCCTGCAGTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458707.1
CDS-3UTR CAA 90 bp GATCAAGCTACAGGTTCACATATGGGACAAACTGTAACAGTCTGCATTCCCCACGAAGTGCATATGAAGTaGATCCATTGCTGTCTGTGT +
Preference number: 5 (lower is better)
Translates to: DQATGSHMGQTVTVCIPHEVHMK*IHCCLC
Trigger: ACACAGACAGCAATGGATCAACTTCATATGCACTTC...GTGGGGAATGCAGACTGTTACAGTTTGTCCCATATGTGAACCTGTAGCTTGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458707.1
CDS-3UTR CAA 90 bp AACGGGGCTGAAAAACGATCAAGCTACAGGTTCACATATGGGACAAACTGTAACGCAGCTTTTGGAATTTaGTGTCTGTGTTTCCTGCAC +
Preference number: 5 (lower is better)
Translates to: NGAEKRSSYRFTYGTNCNAAFGI*CLCFLH
Trigger: GTGCAGGAAACACAGACACAAAATTCCAAAAGCTGC...GTTACAGTTTGTCCCATATGTGAACCTGTAGCTTGATCGTTTTTCAGCCCCGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000458707.1
CDS-3UTR CAA 90 bp TACAGGTCATGCATGGCAATCATTGGACCAATGCCACACAAGCTTAGATGTCCTGAAGCAGTATCCTCATaGTCATGCTTTTCATGCCAT +
Preference number: 5 (lower is better)
Translates to: YRSCMAIIGPMPHKLRCPEAVSS*SCFSCH
Trigger: ATGGCATGAAAAGCATGACAATGAGGATACTGCTTC...AGGACATCTAAGCTTGTGTGGCATTGGTCCAATGATTGCCATGCATGACCTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CAA 90 bp CCCGAGAAACACTTTTCACAGGACCATCTCCTGTCTGCTCATCCACATAGTCTCAAATTCTTCTCCAACTaGCATCAACCTGCTGATTAT +
Preference number: 5 (lower is better)
Translates to: PEKHFSQDHLLSAHPHSLKFFSN*HQPADY
Trigger: ATAATCAGCAGGTTGATGCAAGTTGGAGAAGAATTT...GAGACTATGTGGATGAGCAGACAGGAGATGGTCCTGTGAAAAGTGTTTCTCGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
CDS-3UTR CAA 90 bp CTGTTGATGTTACAGGTCATGCATGGCAATCATTGGACCAATGCCACACAAGCTACAAGGTCACTGTTTTaGAAGAAGTTGAGACTGGCT +
Preference number: 5 (lower is better)
Translates to: LLMLQVMHGNHWTNATQATRSLF*KKLRLA
Trigger: AGCCAGTCTCAACTTCTTCAAAAACAGTGACCTTGT...AGCTTGTGTGGCATTGGTCCAATGATTGCCATGCATGACCTGTAACATCAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CAA 90 bp CTGTTGATGTTACAGGTCATGCATGGCAATCATTGGACCAATGCCACACAAGCTGTCACTGTCATACTCTaGATAGGCACTCTTTTCTTG +
Preference number: 5 (lower is better)
Translates to: LLMLQVMHGNHWTNATQAVTVIL*IGTLFL
Trigger: CAAGAAAAGAGTGCCTATCAAGAGTATGACAGTGAC...AGCTTGTGTGGCATTGGTCCAATGATTGCCATGCATGACCTGTAACATCAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CAA 90 bp CCCGAGAAACACTTTTCACAGGACCATCTCCTGTCTGCTCATCCACATAGTCTCCTGCATTTCTTGACATaGGCATATCCTTCTACAATA +
Preference number: 5 (lower is better)
Translates to: PEKHFSQDHLLSAHPHSLLHFLT*AYPSTI
Trigger: TATTGTAGAAGGATATGCCAATGTCAAGAAATGCAG...GAGACTATGTGGATGAGCAGACAGGAGATGGTCCTGTGAAAAGTGTTTCTCGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
CDS-3UTR CAA 90 bp CATATTCTGAAAGTGCTTCACATTACACTGTGCATTTACAGACATCGCAGGGACTATTCCCTGTGCTCTTaGATCCACCGTTCCATGTCA +
Preference number: 5 (lower is better)
Translates to: HILKVLHITLCIYRHRRDYSLCS*IHRSMS
Trigger: TGACATGGAACGGTGGATCAAAGAGCACAGGGAATA...GTCCCTGCGATGTCTGTAAATGCACAGTGTAATGTGAAGCACTTTCAGAATATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CAA 90 bp ACATTCAAGGCACAACTGAATAGCTCCTGGATAATCTTCCTCCTCCAGCATTTCTTATCACCTCCATGCTaGATCACATGCCATTCTGTG +
Preference number: 5 (lower is better)
Translates to: TFKAQLNSSWIIFLLQHFLSPPC*ITCHSV
Trigger: CACAGAATGGCATGTGATCAAGCATGGAGGTGATAA...GAAATGCTGGAGGAGGAAGATTATCCAGGAGCTATTCAGTTGTGCCTTGAATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649152.1
CDS-3UTR CAA 90 bp CTTTTGTATCAATTCCTATTACCTTGGAAAACACTGGGCTCTACCAGGCAGGTGAAAAGGTCTGTCAGATaGCATGGTCGAGTCTCTAAC +
Preference number: 5 (lower is better)
Translates to: LLYQFLLPWKTLGSTRQVKRSVR*HGRVSN
Trigger: GTTAGAGACTCGACCATGCAATCTGACAGACCTTTT...CACCTGCCTGGTAGAGCCCAGTGTTTTCCAAGGTAATAGGAATTGATACAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CAA 90 bp TACAGGTCATGCATGGCAATCATTGGACCAATGCCACACAAGCTTAGATGTCCTCCTCCTGTTACTGTTTaGATGCTAGCTAGCACTTAT +
Preference number: 5 (lower is better)
Translates to: YRSCMAIIGPMPHKLRCPPPVTV*MLASTY
Trigger: ATAAGTGCTAGCTAGCATCAAAACAGTAACAGGAGG...AGGACATCTAAGCTTGTGTGGCATTGGTCCAATGATTGCCATGCATGACCTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CAA 90 bp CTACTTAGAATCAAGCTGGAACTGCAGGAGTCAGAAACGGGGCTGAAAAACGATGTAGATGGGAACACGTaGATGGAAAAACATAAGCCA +
Preference number: 5 (lower is better)
Translates to: LLRIKLELQESETGLKNDVDGNT*MEKHKP
Trigger: TGGCTTATGTTTTTCCATCAACGTGTTCCCATCTAC...ATCGTTTTTCAGCCCCGTTTCTGACTCCTGCAGTTCCAGCTTGATTCTAAGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000458707.1
CDS CCA 90 bp AGTGCTGGCAGCTTTTTGACATTCAAGGCACAACTGAATAGCTCCTaGATAATCTTCCTCCTTAAGGTAACAACAACAGGAGTCATTGGA +
Preference number: 5 (lower is better)
Translates to: SAGSFLTFKAQLNSS*IIFLLKVTTTGVIG
Trigger: TCCAATGACTCCTGTTGTTGTTACCTTAAGGAGGAAGATTATCCAGGAGCTATTCAGTTGTGCCTTGAATGTCAAAAAGCTGCCAGCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495039.1
CDS-3UTR CAA 90 bp AATTTGTCTCTATACGCCTCTAATTCTTGCAAATTGAGAACAGGTGGAAGCTTCATCACTGAGGCTTTCTaGAGGGCTTTTCAGACCCTG +
Preference number: 5 (lower is better)
Translates to: NLSLYASNSCKLRTGGSFITEAF*RAFQTL
Trigger: CAGGGTCTGAAAAGCCCTCAAGAAAGCCTCAGTGAT...GAAGCTTCCACCTGTTCTCAATTTGCAAGAATTAGAGGCGTATAGAGACAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436177.5
ENST00000438395.5
ENST00000649152.1
CDS-3UTR CAA 90 bp AATTCTTGCAAATTGAGAACAGGTGGAAGCTTCTCCAGCTCATATTTAACAATACAGCTTGAGGGTCACTaGGCTGTTCTCGAAGTTCCC +
Preference number: 5 (lower is better)
Translates to: NSCKLRTGGSFSSSYLTIQLEGH*AVLEVP
Trigger: GGGAACTTCGAGAACAGCCAAGTGACCCTCAAGCTG...TATTGTTAAATATGAGCTGGAGAAGCTTCCACCTGTTCTCAATTTGCAAGAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436177.5
ENST00000438395.5
ENST00000649152.1
CDS-3UTR CAA 90 bp TCACATAACCATTGTTATGACAAGGCGGCAACATCATTTCAGATTACAACAAATCAGCTTGAGGGTCACTaGGCTGTTCTCGAAGTTCCC +
Preference number: 5 (lower is better)
Translates to: SHNHCYDKAATSFQITTNQLEGH*AVLEVP
Trigger: GGGAACTTCGAGAACAGCCAAGTGACCCTCAAGCTG...ATTTGTTGTAATCTGAAATGATGTTGCCGCCTTGTCATAACAATGGTTATGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CAA 90 bp CTTTTGTATCAATTCCTATTACCTTGGAAAACACTGGGCTCTACCAGGCAGGTGAAATTCTTGCAGATTTaGGAAAGAGCTACGTCCAGC +
Preference number: 5 (lower is better)
Translates to: LLYQFLLPWKTLGSTRQVKFLQI*ERATSS
Trigger: GCTGGACGTAGCTCTTTCCAAAATCTGCAAGAATTT...CACCTGCCTGGTAGAGCCCAGTGTTTTCCAAGGTAATAGGAATTGATACAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CAA 90 bp ATCAAGCTGGAACTGCAGGAGTCAGAAACGGGGCTGAAAAACGATCAAGCTACAATAACCAAGAACAACTaGAAACACGGTGTTGTGAAT +
Preference number: 5 (lower is better)
Translates to: IKLELQESETGLKNDQATITKNN*KHGVVN
Trigger: ATTCACAACACCGTGTTTCAAGTTGTTCTTGGTTAT...TGTAGCTTGATCGTTTTTCAGCCCCGTTTCTGACTCCTGCAGTTCCAGCTTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458707.1
CDS-3UTR CAA 90 bp CATATTCTGAAAGTGCTTCACATTACACTGTGCATTTACAGACATCGCAGGGACGCAGCTTTTGGAATTTaGTGTCTGTGTTTCCTGCAC +
Preference number: 5 (lower is better)
Translates to: HILKVLHITLCIYRHRRDAAFGI*CLCFLH
Trigger: GTGCAGGAAACACAGACACAAAATTCCAAAAGCTGC...GTCCCTGCGATGTCTGTAAATGCACAGTGTAATGTGAAGCACTTTCAGAATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CAA 90 bp CACATAGTCTCGTTTGAGTTCCTCAGGAACATCACTGTCACTGTCATACTCTTGGAAGCAGTATCCTCATaGTCATGCTTTTCATGCCAT +
Preference number: 5 (lower is better)
Translates to: HIVSFEFLRNITVTVILLEAVSS*SCFSCH
Trigger: ATGGCATGAAAAGCATGACAATGAGGATACTGCTTC...CAAGAGTATGACAGTGACAGTGATGTTCCTGAGGAACTCAAACGAGACTATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
CDS-3UTR CAA 90 bp TTTTATCACCTTAGGTCCCAGAAGACTCATAAGACCCAAGGCCTGTTTCTCACAGTCACTGTCATACTCTaGATAGGCACTCTTTTCTTG +
Preference number: 5 (lower is better)
Translates to: FYHLRSQKTHKTQGLFLTVTVIL*IGTLFL
Trigger: CAAGAAAAGAGTGCCTATCAAGAGTATGACAGTGAC...TGTGAGAAACAGGCCTTGGGTCTTATGAGTCTTCTGGGACCTAAGGTGATAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CAA 90 bp CAGGGCACGACCCTCATTACTGCATTTCTTGACATTGGCATATCCTTCTACAATCTACAATCCAGTAAATaGGTTTCCGTAGTTCACTGG +
Preference number: 5 (lower is better)
Translates to: QGTTLITAFLDIGISFYNLQSSK*VSVVHW
Trigger: CCAGTGAACTACGGAAACCAATTTACTGGATTGTAG...ATTGTAGAAGGATATGCCAATGTCAAGAAATGCAGTAATGAGGGTCGTGCCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
CDS-3UTR CAA 90 bp AGAGTAGCAATTGTTTCCTTATCACCTCCATGCTTGATCACATGCCATTCTGTGCAAACATTCACCAGATaGGTCAGCTGCTTCGTTGAA +
Preference number: 5 (lower is better)
Translates to: RVAIVSLSPPCLITCHSVQTFTR*VSCFVE
Trigger: TTCAACGAAGCAGCTGACCAATCTGGTGAATGTTTG...CACAGAATGGCATGTGATCAAGCATGGAGGTGATAAGGAAACAATTGCTACTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CAA 90 bp TTCTTGCAGATTTTGGAAAGAGCTACGTCCAGCTGTTCCTCAATCTGTTCCAAACAAACATTCACCAGATaGGTCAGCTGCTTCGTTGAA +
Preference number: 5 (lower is better)
Translates to: FLQILERATSSCSSICSKQTFTR*VSCFVE
Trigger: TTCAACGAAGCAGCTGACCAATCTGGTGAATGTTTG...TTTGGAACAGATTGAGGAACAGCTGGACGTAGCTCTTTCCAAAATCTGCAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
CDS-3UTR CAA 90 bp CAGGGCACGACCCTCATTACTGCATTTCTTGACATTGGCATATCCTTCTACAATTGTCTTGCTTTCTTATaGATATGGGATCCCAGGCAA +
Preference number: 5 (lower is better)
Translates to: QGTTLITAFLDIGISFYNCLAFL*IWDPRQ
Trigger: TTGCCTGGGATCCCATATCAATAAGAAAGCAAGACA...ATTGTAGAAGGATATGCCAATGTCAAGAAATGCAGTAATGAGGGTCGTGCCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
CDS-3UTR CAA 90 bp CTTTTGTATCAATTCCTATTACCTTGGAAAACACTGGGCTCTACCAGGCAGGTGTGTCTTGCTTTCTTATaGATATGGGATCCCAGGCAA +
Preference number: 5 (lower is better)
Translates to: LLYQFLLPWKTLGSTRQVCLAFL*IWDPRQ
Trigger: TTGCCTGGGATCCCATATCAATAAGAAAGCAAGACA...CACCTGCCTGGTAGAGCCCAGTGTTTTCCAAGGTAATAGGAATTGATACAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CAA 90 bp CTGTTGATGTTACAGGTCATGCATGGCAATCATTGGACCAATGCCACACAAGCTTTCAGGTCATATATGTaGAGTGAGGATCAATGCCAT +
Preference number: 5 (lower is better)
Translates to: LLMLQVMHGNHWTNATQAFRSYM*SEDQCH
Trigger: ATGGCATTGATCCTCACTCAACATATATGACCTGAA...AGCTTGTGTGGCATTGGTCCAATGATTGCCATGCATGACCTGTAACATCAACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CAA 90 bp CTCTCCAGTCAGAAAGAACACACACAAAATTCCTTATCAGACAGTTGGCAAGAGGGATTCTGTGAGCTGTaGATGTTACAGGTCATGCAT +
Preference number: 5 (lower is better)
Translates to: LSSQKEHTQNSLSDSWQEGFCEL*MLQVMH
Trigger: ATGCATGACCTGTAACATCAACAGCTCACAGAATCC...CTCTTGCCAACTGTCTGATAAGGAATTTTGTGTGTGTTCTTTCTGACTGGAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CAA 90 bp AATGGCTTGGGTGAAGTGCATATGAAGTTGATCCATTGCTGTCTGTGTTTTTCCGGATTCTGTGAGCTGTaGATGTTACAGGTCATGCAT +
Preference number: 5 (lower is better)
Translates to: NGLGEVHMKLIHCCLCFSGFCEL*MLQVMH
Trigger: ATGCATGACCTGTAACATCAACAGCTCACAGAATCC...GGAAAAACACAGACAGCAATGGATCAACTTCATATGCACTTCACCCAAGCCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649152.1
CDS-3UTR CAA 90 bp CTCTCCAGTCAGAAAGAACACACACAAAATTCCTTATCAGACAGTTGGCAAGAGTTATCACCTCCATGCTaGATCACATGCCATTCTGTG +
Preference number: 5 (lower is better)
Translates to: LSSQKEHTQNSLSDSWQELSPPC*ITCHSV
Trigger: CACAGAATGGCATGTGATCAAGCATGGAGGTGATAA...CTCTTGCCAACTGTCTGATAAGGAATTTTGTGTGTGTTCTTTCTGACTGGAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CAA 90 bp AAGAACACACACAAAATTCCTTATCAGACAGTTGGCAAGAGTACATGGAAAATGATCACTGAGGCTTTCTaGAGGGCTTTTCAGACCCTG +
Preference number: 5 (lower is better)
Translates to: KNTHKIPYQTVGKSTWKMITEAF*RAFQTL
Trigger: CAGGGTCTGAAAAGCCCTCAAGAAAGCCTCAGTGAT...CATTTTCCATGTACTCTTGCCAACTGTCTGATAAGGAATTTTGTGTGTGTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CAA 90 bp ACAGGTGGAAGCTTCTCCAGCTCATATTTAACAATATCAAATGAATCCACAGAAATCACTGAGGCTTTCTaGAGGGCTTTTCAGACCCTG +
Preference number: 5 (lower is better)
Translates to: TGGSFSSSYLTISNESTEITEAF*RAFQTL
Trigger: CAGGGTCTGAAAAGCCCTCAAGAAAGCCTCAGTGAT...TTCTGTGGATTCATTTGATATTGTTAAATATGAGCTGGAGAAGCTTCCACCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436177.5
ENST00000438395.5
ENST00000649152.1
CDS-3UTR CAA 90 bp AGAACAGGTGGAAGCTTCTCCAGCTCATATTTAACAATATCAAATGAATCCACAATCACTGAGGCTTTCTaGAGGGCTTTTCAGACCCTG +
Preference number: 5 (lower is better)
Translates to: RTGGSFSSSYLTISNESTITEAF*RAFQTL
Trigger: CAGGGTCTGAAAAGCCCTCAAGAAAGCCTCAGTGAT...TGTGGATTCATTTGATATTGTTAAATATGAGCTGGAGAAGCTTCCACCTGTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436177.5
ENST00000438395.5
ENST00000649152.1
CDS-3UTR CAA 90 bp ACAGGTGGAAGCTTCTCCAGCTCATATTTAACAATATCAAATGAATCCACAGAAAAGCTCTTGTTCAGCTaGAGGGTCACTTGGCTGTTC +
Preference number: 5 (lower is better)
Translates to: TGGSFSSSYLTISNESTEKLLFS*RVTWLF
Trigger: GAACAGCCAAGTGACCCTCAAGCTGAACAAGAGCTT...TTCTGTGGATTCATTTGATATTGTTAAATATGAGCTGGAGAAGCTTCCACCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436177.5
ENST00000438395.5
ENST00000649152.1
CDS-3UTR CAA 90 bp ATGTATAACTGTAGTCACATAACCATTGTTATGACAAGGCGGCAACATCATTTCAAGCTCTTGTTCAGCTaGAGGGTCACTTGGCTGTTC +
Preference number: 5 (lower is better)
Translates to: MYNCSHITIVMTRRQHHFKLLFS*RVTWLF
Trigger: GAACAGCCAAGTGACCCTCAAGCTGAACAAGAGCTT...GAAATGATGTTGCCGCCTTGTCATAACAATGGTTATGTGACTACAGTTATACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CAA 90 bp CTTGATCACATGCCATTCTGTGCCATCCATTTTATCACCTTAGGTCCCAGAAGATCTAATTCTTGCAAATaGAGAACAGGTGGAAGCTTC +
Preference number: 5 (lower is better)
Translates to: LDHMPFCAIHFITLGPRRSNSCK*RTGGSF
Trigger: GAAGCTTCCACCTGTTCTCAATTTGCAAGAATTAGA...TCTTCTGGGACCTAAGGTGATAAAATGGATGGCACAGAATGGCATGTGATCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CAA 90 bp CTACTTAGAATCAAGCTGGAACTGCAGGAGTCAGAAACGGGGCTGAAAAACGATTATGAAGTTGATCCATaGCTGTCTGTGTTTTTCCAA +
Preference number: 5 (lower is better)
Translates to: LLRIKLELQESETGLKNDYEVDP*LSVFFQ
Trigger: TTGGAAAAACACAGACAGCAATGGATCAACTTCATA...ATCGTTTTTCAGCCCCGTTTCTGACTCCTGCAGTTCCAGCTTGATTCTAAGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000458707.1
CDS-3UTR CAA 90 bp TTTAGAGTTGTTCTTAGTCTACTACTACTAAGGCCGAGTCCAGTTGATTCCAATGGTGTTGTGAATGGCTaGGGTGAAGTGCATATGAAG +
Preference number: 5 (lower is better)
Translates to: FRVVLSLLLLRPSPVDSNGVVNG*GEVHMK
Trigger: CTTCATATGCACTTCACCCAAGCCATTCACAACACC...ATTGGAATCAACTGGACTCGGCCTTAGTAGTAGTAGACTAAGAACAACTCTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
CDS-3UTR CAA 90 bp CTCATTGTCATGCTTTTCATGCCATTCCATAGTCCTATAATAGCTGAGCATAACGGTGTTGTGAATGGCTaGGGTGAAGTGCATATGAAG +
Preference number: 5 (lower is better)
Translates to: LIVMLFMPFHSPIIAEHNGVVNG*GEVHMK
Trigger: CTTCATATGCACTTCACCCAAGCCATTCACAACACC...GTTATGCTCAGCTATTATAGGACTATGGAATGGCATGAAAAGCATGACAATGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
CDS-3UTR CAA 90 bp CTGTTGATGTTACAGGTCATGCATGGCAATCATTGGACCAATGCCACACAAGCTATAACCAAGAACAACTaGAAACACGGTGTTGTGAAT +
Preference number: 5 (lower is better)
Translates to: LLMLQVMHGNHWTNATQAITKNN*KHGVVN
Trigger: ATTCACAACACCGTGTTTCAAGTTGTTCTTGGTTAT...AGCTTGTGTGGCATTGGTCCAATGATTGCCATGCATGACCTGTAACATCAACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CAA 90 bp TGTTATGACAAGGCGGCAACATCATTTCAGATTACAACAAATGAGACCAAAAGTACTTCCCATAGTGCTTaGCACAGGTCTGCAAGGCAT +
Preference number: 5 (lower is better)
Translates to: CYDKAATSFQITTNETKSTSHSA*HRSARH
Trigger: ATGCCTTGCAGACCTGTGCAAAGCACTATGGGAAGT...ACTTTTGGTCTCATTTGTTGTAATCTGAAATGATGTTGCCGCCTTGTCATAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000305866.10
ENST00000441602.5
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CAA 90 bp AAGAACACACACAAAATTCCTTATCAGACAGTTGGCAAGAGTACATGGAAAATGACTTCCCATAGTGCTTaGCACAGGTCTGCAAGGCAT +
Preference number: 5 (lower is better)
Translates to: KNTHKIPYQTVGKSTWKMTSHSA*HRSARH
Trigger: ATGCCTTGCAGACCTGTGCAAAGCACTATGGGAAGT...CATTTTCCATGTACTCTTGCCAACTGTCTGATAAGGAATTTTGTGTGTGTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CAA 90 bp GATCAAGCTACAGGTTCACATATGGGACAAACTGTAACAGTCTGCATTCCCCACAAATTCTTCTCCAACTaGCATCAACCTGCTGATTAT +
Preference number: 5 (lower is better)
Translates to: DQATGSHMGQTVTVCIPHKFFSN*HQPADY
Trigger: ATAATCAGCAGGTTGATGCAAGTTGGAGAAGAATTT...GTGGGGAATGCAGACTGTTACAGTTTGTCCCATATGTGAACCTGTAGCTTGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458707.1
CDS-3UTR CAA 90 bp TTGTCTCTATACGCCTCTAATTCTTGCAAATTGAGAACAGGTGGAAGCTTCTCCACAAGGTCACTGTTTTaGAAGAAGTTGAGACTGGCT +
Preference number: 5 (lower is better)
Translates to: LSLYASNSCKLRTGGSFSTRSLF*KKLRLA
Trigger: AGCCAGTCTCAACTTCTTCAAAAACAGTGACCTTGT...GGAGAAGCTTCCACCTGTTCTCAATTTGCAAGAATTAGAGGCGTATAGAGACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649152.1
CDS-3UTR CAA 90 bp TTTTATCACCTTAGGTCCCAGAAGACTCATAAGACCCAAGGCCTGTTTCTCACAATAGGCACTCTTTTCTaGTTCATCAGATTCATACCC +
Preference number: 5 (lower is better)
Translates to: FYHLRSQKTHKTQGLFLTIGTLF*FIRFIP
Trigger: GGGTATGAATCTGATGAACAAGAAAAGAGTGCCTAT...TGTGAGAAACAGGCCTTGGGTCTTATGAGTCTTCTGGGACCTAAGGTGATAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CAA 90 bp GGGGCTGAAAAACGATCAAGCTACAGGTTCACATATGGGACAAACTGTAACAGTATAGGCACTCTTTTCTaGTTCATCAGATTCATACCC +
Preference number: 5 (lower is better)
Translates to: GAEKRSSYRFTYGTNCNSIGTLF*FIRFIP
Trigger: GGGTATGAATCTGATGAACAAGAAAAGAGTGCCTAT...ACTGTTACAGTTTGTCCCATATGTGAACCTGTAGCTTGATCGTTTTTCAGCCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000458707.1
CDS-3UTR CAA 90 bp TCCTTAGGATTCTGTGAGCTGTTGATGTTACAGGTCATGCATGGCAATCATTGGATAGGCACTCTTTTCTaGTTCATCAGATTCATACCC +
Preference number: 5 (lower is better)
Translates to: SLGFCELLMLQVMHGNHWIGTLF*FIRFIP
Trigger: GGGTATGAATCTGATGAACAAGAAAAGAGTGCCTAT...CCAATGATTGCCATGCATGACCTGTAACATCAACAGCTCACAGAATCCTAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CAA 90 bp CTCTCCAGTCAGAAAGAACACACACAAAATTCCTTATCAGACAGTTGGCAAGAGGTCACTGTCATACTCTaGATAGGCACTCTTTTCTTG +
Preference number: 5 (lower is better)
Translates to: LSSQKEHTQNSLSDSWQEVTVIL*IGTLFL
Trigger: CAAGAAAAGAGTGCCTATCAAGAGTATGACAGTGAC...CTCTTGCCAACTGTCTGATAAGGAATTTTGTGTGTGTTCTTTCTGACTGGAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CAA 90 bp CAAACATATTCTGAAAGTGCTTCACATTACACTGTGCATTTACAGACATCGCAGGTAGTTCACTGGCGGTaGAGACTGTCTGAGAATAGA +
Preference number: 5 (lower is better)
Translates to: QTYSESASHYTVHLQTSQVVHWR*RLSENR
Trigger: TCTATTCTCAGACAGTCTCAACCGCCAGTGAACTAC...CTGCGATGTCTGTAAATGCACAGTGTAATGTGAAGCACTTTCAGAATATGTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CAA 90 bp AGAGTAGCAATTGTTTCCTTATCACCTCCATGCTTGATCACATGCCATTCTGTGCTACAATCCAGTAAATaGGTTTCCGTAGTTCACTGG +
Preference number: 5 (lower is better)
Translates to: RVAIVSLSPPCLITCHSVLQSSK*VSVVHW
Trigger: CCAGTGAACTACGGAAACCAATTTACTGGATTGTAG...CACAGAATGGCATGTGATCAAGCATGGAGGTGATAAGGAAACAATTGCTACTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CAA 90 bp AATGGCTTGGGTGAAGTGCATATGAAGTTGATCCATTGCTGTCTGTGTTTTTCCCTACAATCCAGTAAATaGGTTTCCGTAGTTCACTGG +
Preference number: 5 (lower is better)
Translates to: NGLGEVHMKLIHCCLCFSLQSSK*VSVVHW
Trigger: CCAGTGAACTACGGAAACCAATTTACTGGATTGTAG...GGAAAAACACAGACAGCAATGGATCAACTTCATATGCACTTCACCCAAGCCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
CDS-3UTR CAA 90 bp GTTCACTGGCGGTTGAGACTGAGAATAGAACTGCTGAAGAAAGGGCTTTTTGACTCATTACTGCATTTCTaGACATTGGCATATCCTTCT +
Preference number: 5 (lower is better)
Translates to: VHWRLRLRIELLKKGLFDSLLHF*TLAYPS
Trigger: AGAAGGATATGCCAATGTCAAGAAATGCAGTAATGA...GTCAAAAAGCCCTTTCTTCAGCAGTTCTATTCTCAGTCTCAACCGCCAGTGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441602.5
CDS-3UTR CAA 90 bp AAGAACACACACAAAATTCCTTATCAGACAGTTGGCAAGAGTACATGGAAAATGCTGTTGAAAATCCAATaGCATCAGGGCACGACCCTC +
Preference number: 5 (lower is better)
Translates to: KNTHKIPYQTVGKSTWKMLLKIQ*HQGTTL
Trigger: GAGGGTCGTGCCCTGATGCAATTGGATTTTCAACAG...CATTTTCCATGTACTCTTGCCAACTGTCTGATAAGGAATTTTGTGTGTGTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CAA 90 bp CAAACATATTCTGAAAGTGCTTCACATTACACTGTGCATTTACAGACATCGCAGTATTCCCTGTGCTCTTaGATCCACCGTTCCATGTCA +
Preference number: 5 (lower is better)
Translates to: QTYSESASHYTVHLQTSQYSLCS*IHRSMS
Trigger: TGACATGGAACGGTGGATCAAAGAGCACAGGGAATA...CTGCGATGTCTGTAAATGCACAGTGTAATGTGAAGCACTTTCAGAATATGTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CAA 90 bp TTTAGAGTTGTTCTTAGTCTACTACTACTAAGGCCGAGTCCAGTTGATTCCAATTGGTCAGCTGCTTCGTaGAATATTCCCTGTGCTCTT +
Preference number: 5 (lower is better)
Translates to: FRVVLSLLLLRPSPVDSNWSAAS*NIPCAL
Trigger: AAGAGCACAGGGAATATTCAACGAAGCAGCTGACCA...ATTGGAATCAACTGGACTCGGCCTTAGTAGTAGTAGACTAAGAACAACTCTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
CDS-3UTR CAA 90 bp TTTTATCACCTTAGGTCCCAGAAGACTCATAAGACCCAAGGCCTGTTTCTCACAAAGCTTATCTCATGTTaGTTTTCTTCAAGTGGCTGC +
Preference number: 5 (lower is better)
Translates to: FYHLRSQKTHKTQGLFLTKLISC*FSSSGC
Trigger: GCAGCCACTTGAAGAAAACAAACATGAGATAAGCTT...TGTGAGAAACAGGCCTTGGGTCTTATGAGTCTTCTGGGACCTAAGGTGATAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CAA 90 bp CTTGATCACATGCCATTCTGTGCCATCCATTTTATCACCTTAGGTCCCAGAAGAAAGCTTATCTCATGTTaGTTTTCTTCAAGTGGCTGC +
Preference number: 5 (lower is better)
Translates to: LDHMPFCAIHFITLGPRRKLISC*FSSSGC
Trigger: GCAGCCACTTGAAGAAAACAAACATGAGATAAGCTT...TCTTCTGGGACCTAAGGTGATAAAATGGATGGCACAGAATGGCATGTGATCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CAA 90 bp ATTCACCCTCACATTATGCTTATTAAGAACCAAGCTCAGAGGGTAGAAAAGTGCAAAAGGTCTGTCAGATaGCATGGTCGAGTCTCTAAC +
Preference number: 5 (lower is better)
Translates to: IHPHIMLIKNQAQRVEKCKRSVR*HGRVSN
Trigger: GTTAGAGACTCGACCATGCAATCTGACAGACCTTTT...GCACTTTTCTACCCTCTGAGCTTGGTTCTTAATAAGCATAATGTGAGGGTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS TCA 90 bp CATAACCAAGAACAACTTGAAACACGGTGTTGTGAATGGCTTGGGTaGAGTGCATATGAAGTTGATCCATTGCTGTCTGTGGAAAGAAAA +
Preference number: 5 (lower is better)
Translates to: HNQEQLETRCCEWLG*SAYEVDPLLSVERK
Trigger: TTTTCTTTCCACAGACAGCAATGGATCAACTTCATATGCACTTCACCCAAGCCATTCACAACACCGTGTTTCAAGTTGTTCTTGGTTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485140.1
CDS CCA 90 bp CTTAAGAATGTTCATCATCTGCATATATTTTCCGCACAGTCTCTGTaGCAACAATTCTGCTCTGCTGTCTTCTGTTTCAACTGCTCAACT +
Preference number: 5 (lower is better)
Translates to: LKNVHHLHIFSAQSL*QQFCSAVFCFNCST
Trigger: AGTTGAGCAGTTGAAACAGAAGACAGCAGAGCAGAATTGTTGCCACAGAGACTGTGCGGAAAATATATGCAGATGATGAACATTCTTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467326.5
CDS-3UTR CAA 90 bp AATTCTTGCAAATTGAGAACAGGTGGAAGCTTCTCCAGCTCATATTTAACAATAAAGCTCTTGTTCAGCTaGAGGGTCACTTGGCTGTTC +
Preference number: 5 (lower is better)
Translates to: NSCKLRTGGSFSSSYLTIKLLFS*RVTWLF
Trigger: GAACAGCCAAGTGACCCTCAAGCTGAACAAGAGCTT...TATTGTTAAATATGAGCTGGAGAAGCTTCCACCTGTTCTCAATTTGCAAGAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436177.5
ENST00000438395.5
ENST00000649152.1
CDS-3UTR CAA 90 bp CATATTCTGAAAGTGCTTCACATTACACTGTGCATTTACAGACATCGCAGGGACACTATTAATAAGCTCTaGTTCAGCTTGAGGGTCACT +
Preference number: 5 (lower is better)
Translates to: HILKVLHITLCIYRHRRDTINKL*FSLRVT
Trigger: AGTGACCCTCAAGCTGAACAAGAGCTTATTAATAGT...GTCCCTGCGATGTCTGTAAATGCACAGTGTAATGTGAAGCACTTTCAGAATATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CAA 90 bp CTCTCCAGTCAGAAAGAACACACACAAAATTCCTTATCAGACAGTTGGCAAGAGACTATTAATAAGCTCTaGTTCAGCTTGAGGGTCACT +
Preference number: 5 (lower is better)
Translates to: LSSQKEHTQNSLSDSWQETINKL*FSLRVT
Trigger: AGTGACCCTCAAGCTGAACAAGAGCTTATTAATAGT...CTCTTGCCAACTGTCTGATAAGGAATTTTGTGTGTGTTCTTTCTGACTGGAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CAA 90 bp CATATTCTGAAAGTGCTTCACATTACACTGTGCATTTACAGACATCGCAGGGACTCTAATTCTTGCAAATaGAGAACAGGTGGAAGCTTC +
Preference number: 5 (lower is better)
Translates to: HILKVLHITLCIYRHRRDSNSCK*RTGGSF
Trigger: GAAGCTTCCACCTGTTCTCAATTTGCAAGAATTAGA...GTCCCTGCGATGTCTGTAAATGCACAGTGTAATGTGAAGCACTTTCAGAATATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CAA 90 bp TTGTCTCTATACGCCTCTAATTCTTGCAAATTGAGAACAGGTGGAAGCTTCTCCTCTAATTCTTGCAAATaGAGAACAGGTGGAAGCTTC +
Preference number: 5 (lower is better)
Translates to: LSLYASNSCKLRTGGSFSSNSCK*RTGGSF
Trigger: GAAGCTTCCACCTGTTCTCAATTTGCAAGAATTAGA...GGAGAAGCTTCCACCTGTTCTCAATTTGCAAGAATTAGAGGCGTATAGAGACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436177.5
ENST00000438395.5
ENST00000649152.1
CDS-3UTR CAA 90 bp AGTAGCAATTGTTTCCTTATCACCTCCATGCTTGATCACATGCCATTCTGTGCCTTTAGATACTGCAGCTaGCTGTTGTTTCAATTTGTC +
Preference number: 5 (lower is better)
Translates to: SSNCFLITSMLDHMPFCAFRYCS*LLFQFV
Trigger: GACAAATTGAAACAACAGCAAGCTGCAGTATCTAAA...GGCACAGAATGGCATGTGATCAAGCATGGAGGTGATAAGGAAACAATTGCTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CAA 90 bp ACATTCAAGGCACAACTGAATAGCTCCTGGATAATCTTCCTCCTCCAGCATTTCTTTAGATACTGCAGCTaGCTGTTGTTTCAATTTGTC +
Preference number: 5 (lower is better)
Translates to: TFKAQLNSSWIIFLLQHFFRYCS*LLFQFV
Trigger: GACAAATTGAAACAACAGCAAGCTGCAGTATCTAAA...GAAATGCTGGAGGAGGAAGATTATCCAGGAGCTATTCAGTTGTGCCTTGAATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
CDS-3UTR CAA 90 bp AAGAACACACACAAAATTCCTTATCAGACAGTTGGCAAGAGTACATGGAAAATGAGTGCTGGCAGCTTTTaGACATTCAAGGCACAACTG +
Preference number: 5 (lower is better)
Translates to: KNTHKIPYQTVGKSTWKMSAGSF*TFKAQL
Trigger: CAGTTGTGCCTTGAATGTCAAAAAGCTGCCAGCACT...CATTTTCCATGTACTCTTGCCAACTGTCTGATAAGGAATTTTGTGTGTGTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CAA 90 bp CAGAGATTTCAGAAGTCCAATCAGCAACTGACGTTTCCTTTGATTTGCAAGAAGAAATTCTTGCAGATTTaGGAAAGAGCTACGTCCAGC +
Preference number: 5 (lower is better)
Translates to: QRFQKSNQQLTFPLICKKKFLQI*ERATSS
Trigger: GCTGGACGTAGCTCTTTCCAAAATCTGCAAGAATTT...CTTCTTGCAAATCAAAGGAAACGTCAGTTGCTGATTGGACTTCTGAAATCTCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
CDS-3UTR CAA 90 bp AGCAATTGTTTCCTTATCACCTCCATGCTTGATCACATGCCATTCTGTGCCATCAAGAAGTCGATAAGCTaGTTGAACCTTGGTATAATG +
Preference number: 5 (lower is better)
Translates to: SNCFLITSMLDHMPFCAIKKSIS*LNLGIM
Trigger: CATTATACCAAGGTTCAACAAGCTTATCGACTTCTT...GATGGCACAGAATGGCATGTGATCAAGCATGGAGGTGATAAGGAAACAATTGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CAA 90 bp TTTTATCACCTTAGGTCCCAGAAGACTCATAAGACCCAAGGCCTGTTTCTCACATATGAAGTTGATCCATaGCTGTCTGTGTTTTTCCAA +
Preference number: 5 (lower is better)
Translates to: FYHLRSQKTHKTQGLFLTYEVDP*LSVFFQ
Trigger: TTGGAAAAACACAGACAGCAATGGATCAACTTCATA...TGTGAGAAACAGGCCTTGGGTCTTATGAGTCTTCTGGGACCTAAGGTGATAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CAA 90 bp AGTAGCAATTGTTTCCTTATCACCTCCATGCTTGATCACATGCCATTCTGTGCCTATGAAGTTGATCCATaGCTGTCTGTGTTTTTCCAA +
Preference number: 5 (lower is better)
Translates to: SSNCFLITSMLDHMPFCAYEVDP*LSVFFQ
Trigger: TTGGAAAAACACAGACAGCAATGGATCAACTTCATA...GGCACAGAATGGCATGTGATCAAGCATGGAGGTGATAAGGAAACAATTGCTACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CAA 90 bp AAGAACACACACAAAATTCCTTATCAGACAGTTGGCAAGAGTACATGGAAAATGGGTGTTGTGAATGGCTaGGGTGAAGTGCATATGAAG +
Preference number: 5 (lower is better)
Translates to: KNTHKIPYQTVGKSTWKMGVVNG*GEVHMK
Trigger: CTTCATATGCACTTCACCCAAGCCATTCACAACACC...CATTTTCCATGTACTCTTGCCAACTGTCTGATAAGGAATTTTGTGTGTGTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CAA 90 bp ATTCACCCTCACATTATGCTTATTAAGAACCAAGCTCAGAGGGTAGAAAAGTGCGAAGCAGTATCCTCATaGTCATGCTTTTCATGCCAT +
Preference number: 5 (lower is better)
Translates to: IHPHIMLIKNQAQRVEKCEAVSS*SCFSCH
Trigger: ATGGCATGAAAAGCATGACAATGAGGATACTGCTTC...GCACTTTTCTACCCTCTGAGCTTGGTTCTTAATAAGCATAATGTGAGGGTGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000305866.10
ENST00000441602.5
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CAA 90 bp TCCTTAGGATTCTGTGAGCTGTTGATGTTACAGGTCATGCATGGCAATCATTGGAAATTCTTCTCCAACTaGCATCAACCTGCTGATTAT +
Preference number: 5 (lower is better)
Translates to: SLGFCELLMLQVMHGNHWKFFSN*HQPADY
Trigger: ATAATCAGCAGGTTGATGCAAGTTGGAGAAGAATTT...CCAATGATTGCCATGCATGACCTGTAACATCAACAGCTCACAGAATCCTAAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CAA 90 bp CTTGATCACATGCCATTCTGTGCCATCCATTTTATCACCTTAGGTCCCAGAAGAAAATTCTTCTCCAACTaGCATCAACCTGCTGATTAT +
Preference number: 5 (lower is better)
Translates to: LDHMPFCAIHFITLGPRRKFFSN*HQPADY
Trigger: ATAATCAGCAGGTTGATGCAAGTTGGAGAAGAATTT...TCTTCTGGGACCTAAGGTGATAAAATGGATGGCACAGAATGGCATGTGATCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CAA 90 bp CAGTTCCAAGCAAGTAGGTTTTTACTTTTAGCTGAACATCCTGCCATATTCGTGACAAGGTCACTGTTTTaGAAGAAGTTGAGACTGGCT +
Preference number: 5 (lower is better)
Translates to: QFQASRFLLLAEHPAIFVTRSLF*KKLRLA
Trigger: AGCCAGTCTCAACTTCTTCAAAAACAGTGACCTTGT...CACGAATATGGCAGGATGTTCAGCTAAAAGTAAAAACCTACTTGCTTGGAACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
CDS-3UTR CAA 90 bp ATTCACCCTCACATTATGCTTATTAAGAACCAAGCTCAGAGGGTAGAAAAGTGCCTACAATCCAGTAAATaGGTTTCCGTAGTTCACTGG +
Preference number: 5 (lower is better)
Translates to: IHPHIMLIKNQAQRVEKCLQSSK*VSVVHW
Trigger: CCAGTGAACTACGGAAACCAATTTACTGGATTGTAG...GCACTTTTCTACCCTCTGAGCTTGGTTCTTAATAAGCATAATGTGAGGGTGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000305866.10
ENST00000441602.5
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CAA 90 bp TCCTTAGGATTCTGTGAGCTGTTGATGTTACAGGTCATGCATGGCAATCATTGGCTGCATTTCTTGACATaGGCATATCCTTCTACAATA +
Preference number: 5 (lower is better)
Translates to: SLGFCELLMLQVMHGNHWLHFLT*AYPSTI
Trigger: TATTGTAGAAGGATATGCCAATGTCAAGAAATGCAG...CCAATGATTGCCATGCATGACCTGTAACATCAACAGCTCACAGAATCCTAAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CAA 90 bp CTTGATCACATGCCATTCTGTGCCATCCATTTTATCACCTTAGGTCCCAGAAGACTGCATTTCTTGACATaGGCATATCCTTCTACAATA +
Preference number: 5 (lower is better)
Translates to: LDHMPFCAIHFITLGPRRLHFLT*AYPSTI
Trigger: TATTGTAGAAGGATATGCCAATGTCAAGAAATGCAG...TCTTCTGGGACCTAAGGTGATAAAATGGATGGCACAGAATGGCATGTGATCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CAA 90 bp CTTGATCACATGCCATTCTGTGCCATCCATTTTATCACCTTAGGTCCCAGAAGATCATTACTGCATTTCTaGACATTGGCATATCCTTCT +
Preference number: 5 (lower is better)
Translates to: LDHMPFCAIHFITLGPRRSLLHF*TLAYPS
Trigger: AGAAGGATATGCCAATGTCAAGAAATGCAGTAATGA...TCTTCTGGGACCTAAGGTGATAAAATGGATGGCACAGAATGGCATGTGATCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CAA 90 bp GCCAATCGTATACAATGTTCCCAAAGTATATTAGACACAGGCAAGGGTATGCGATTCAGGTCATATATGTaGAGTGAGGATCAATGCCAT +
Preference number: 5 (lower is better)
Translates to: ANRIQCSQSILDTGKGMRFRSYM*SEDQCH
Trigger: ATGGCATTGATCCTCACTCAACATATATGACCTGAA...TCGCATACCCTTGCCTGTGTCTAATATACTTTGGGAACATTGTATACGATTGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
CDS-3UTR CAA 90 bp AGAGTAGCAATTGTTTCCTTATCACCTCCATGCTTGATCACATGCCATTCTGTGTTCCTTATCAGACAGTaGGCAAGAGTACATGGAAAA +
Preference number: 5 (lower is better)
Translates to: RVAIVSLSPPCLITCHSVFLIRQ*ARVHGK
Trigger: TTTTCCATGTACTCTTGCCAACTGTCTGATAAGGAA...CACAGAATGGCATGTGATCAAGCATGGAGGTGATAAGGAAACAATTGCTACTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CAA 90 bp TTCCTTATCAGACAGTTGGCAAGAGTACATGGAAAATGGATTTTTATGTCACATCATGCATGGCAATCATaGGACCAATGCCACACAAGC +
Preference number: 5 (lower is better)
Translates to: FLIRQLARVHGKWIFMSHHAWQS*DQCHTS
Trigger: GCTTGTGTGGCATTGGTCCAATGATTGCCATGCATG...ATGTGACATAAAAATCCATTTTCCATGTACTCTTGCCAACTGTCTGATAAGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CAA 90 bp ATTCACCCTCACATTATGCTTATTAAGAACCAAGCTCAGAGGGTAGAAAAGTGCTCAATTCCTATTACCTaGGAAAACACTGGGCTCTAC +
Preference number: 5 (lower is better)
Translates to: IHPHIMLIKNQAQRVEKCSIPIT*ENTGLY
Trigger: GTAGAGCCCAGTGTTTTCCAAGGTAATAGGAATTGA...GCACTTTTCTACCCTCTGAGCTTGGTTCTTAATAAGCATAATGTGAGGGTGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CAA 90 bp AGACTTGCTACCACAAAATTCTTCTCCAACTTGCATCAACCTGCTGATTATATCAAAAGGTCTGTCAGATaGCATGGTCGAGTCTCTAAC +
Preference number: 5 (lower is better)
Translates to: RLATTKFFSNLHQPADYIKRSVR*HGRVSN
Trigger: GTTAGAGACTCGACCATGCAATCTGACAGACCTTTT...GATATAATCAGCAGGTTGATGCAAGTTGGAGAAGAATTTTGTGGTAGCAAGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649152.1
CDS-3UTR CAA 90 bp CAGGGCACGACCCTCATTACTGCATTTCTTGACATTGGCATATCCTTCTACAATTCTAATTCTTGCAAATaGAGAACAGGTGGAAGCTTA +
Preference number: 5 (lower is better)
Translates to: QGTTLITAFLDIGISFYNSNSCK*RTGGSL
Trigger: TAAGCTTCCACCTGTTCTCAATTTGCAAGAATTAGA...ATTGTAGAAGGATATGCCAATGTCAAGAAATGCAGTAATGAGGGTCGTGCCCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441602.5
CDS CCA 90 bp TTGTTCAATACTATTAATAAGCTCTTGTTCAGCTTGAGGGTCACTTaGCTGTTCTCGAAGTTCCCTGAATTCTTCACGTGTAGCTCAATA +
Preference number: 5 (lower is better)
Translates to: LFNTINKLLFSLRVT*LFSKFPEFFTCSSI
Trigger: TATTGAGCTACACGTGAAGAATTCAGGGAACTTCGAGAACAGCCAAGTGACCCTCAAGCTGAACAAGAGCTTATTAATAGTATTGAACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436177.5
CDS-3UTR CAA 90 bp CTCTCCAGTCAGAAAGAACACACACAAAATTCCTTATCAGACAGTTGGCAAGAGGAGAGATTTGATTTTTaGCATATCGAAATCCTGAGG +
Preference number: 5 (lower is better)
Translates to: LSSQKEHTQNSLSDSWQEERFDF*HIEILR
Trigger: CCTCAGGATTTCGATATGCAAAAAATCAAATCTCTC...CTCTTGCCAACTGTCTGATAAGGAATTTTGTGTGTGTTCTTTCTGACTGGAGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CAA 90 bp CCATTTCACATTAGCCATGAGAAGCAGCATCTGTTCATAATCAAGGGCTTTACCTACTGCAGCTTGCTGTaGTTTCAATTTGTCTCTATA +
Preference number: 5 (lower is better)
Translates to: PFHISHEKQHLFIIKGFTYCSLL*FQFVSI
Trigger: TATAGAGACAAATTGAAACAACAGCAAGCTGCAGTA...GGTAAAGCCCTTGATTATGAACAGATGCTGCTTCTCATGGCTAATGTGAAATGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
CDS-3UTR CAA 90 bp CTCTCCAGTCAGAAAGAACACACACAAAATTCCTTATCAGACAGTTGGCAAGAGTTTAGATACTGCAGCTaGCTGTTGTTTCAATTTGTC +
Preference number: 5 (lower is better)
Translates to: LSSQKEHTQNSLSDSWQEFRYCS*LLFQFV
Trigger: GACAAATTGAAACAACAGCAAGCTGCAGTATCTAAA...CTCTTGCCAACTGTCTGATAAGGAATTTTGTGTGTGTTCTTTCTGACTGGAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CAA 90 bp GCCAATCGTATACAATGTTCCCAAAGTATATTAGACACAGGCAAGGGTATGCGATTTAGATACTGCAGCTaGCTGTTGTTTCAATTTGTC +
Preference number: 5 (lower is better)
Translates to: ANRIQCSQSILDTGKGMRFRYCS*LLFQFV
Trigger: GACAAATTGAAACAACAGCAAGCTGCAGTATCTAAA...TCGCATACCCTTGCCTGTGTCTAATATACTTTGGGAACATTGTATACGATTGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
CDS-3UTR CAA 90 bp AATTTCTTTTACATCCCATTTCACATTAGCCATGAGAAGCAGCATCTGTTCATAAGTGCTGGCAGCTTTTaGACATTCAAGGCACAACTG +
Preference number: 5 (lower is better)
Translates to: NFFYIPFHISHEKQHLFISAGSF*TFKAQL
Trigger: CAGTTGTGCCTTGAATGTCAAAAAGCTGCCAGCACT...TATGAACAGATGCTGCTTCTCATGGCTAATGTGAAATGGGATGTAAAAGAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
CDS-3UTR CAA 90 bp ACACACAAAATTCCTTATCAGACAGTTGGCAAGAGTACATGGAAAATGGATTTTAGTGCTGGCAGCTTTTaGACATTCAAGGCACAACTG +
Preference number: 5 (lower is better)
Translates to: THKIPYQTVGKSTWKMDFSAGSF*TFKAQL
Trigger: CAGTTGTGCCTTGAATGTCAAAAAGCTGCCAGCACT...AAAATCCATTTTCCATGTACTCTTGCCAACTGTCTGATAAGGAATTTTGTGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CAA 90 bp CAAACATATTCTGAAAGTGCTTCACATTACACTGTGCATTTACAGACATCGCAGAAATTCTTGCAGATTTaGGAAAGAGCTACGTCCAGC +
Preference number: 5 (lower is better)
Translates to: QTYSESASHYTVHLQTSQKFLQI*ERATSS
Trigger: GCTGGACGTAGCTCTTTCCAAAATCTGCAAGAATTT...CTGCGATGTCTGTAAATGCACAGTGTAATGTGAAGCACTTTCAGAATATGTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CAA 90 bp AGAGTAGCAATTGTTTCCTTATCACCTCCATGCTTGATCACATGCCATTCTGTGAAGAAGTCGATAAGCTaGTTGAACCTTGGTATAATG +
Preference number: 5 (lower is better)
Translates to: RVAIVSLSPPCLITCHSVKKSIS*LNLGIM
Trigger: CATTATACCAAGGTTCAACAAGCTTATCGACTTCTT...CACAGAATGGCATGTGATCAAGCATGGAGGTGATAAGGAAACAATTGCTACTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CAA 90 bp TTTAGAGTTGTTCTTAGTCTACTACTACTAAGGCCGAGTCCAGTTGATTCCAATGAAGTGCATATGAAGTaGATCCATTGCTGTCTGTGT +
Preference number: 5 (lower is better)
Translates to: FRVVLSLLLLRPSPVDSNEVHMK*IHCCLC
Trigger: ACACAGACAGCAATGGATCAACTTCATATGCACTTC...ATTGGAATCAACTGGACTCGGCCTTAGTAGTAGTAGACTAAGAACAACTCTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
CDS-3UTR CAA 90 bp TTCCTTATCAGACAGTTGGCAAGAGTACATGGAAAATGGATTTTTATGTCACATGGTGTTGTGAATGGCTaGGGTGAAGTGCATATGAAG +
Preference number: 5 (lower is better)
Translates to: FLIRQLARVHGKWIFMSHGVVNG*GEVHMK
Trigger: CTTCATATGCACTTCACCCAAGCCATTCACAACACC...ATGTGACATAAAAATCCATTTTCCATGTACTCTTGCCAACTGTCTGATAAGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CAA 90 bp CTCTCCAGTCAGAAAGAACACACACAAAATTCCTTATCAGACAGTTGGCAAGAGATAACCAAGAACAACTaGAAACACGGTGTTGTGAAT +
Preference number: 5 (lower is better)
Translates to: LSSQKEHTQNSLSDSWQEITKNN*KHGVVN
Trigger: ATTCACAACACCGTGTTTCAAGTTGTTCTTGGTTAT...CTCTTGCCAACTGTCTGATAAGGAATTTTGTGTGTGTTCTTTCTGACTGGAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CAA 90 bp TGCAGATTTTGGAAAGAGCTACGTCCAGCTGTTCCTCAATCTGTTCCAAAGTATATAACCAAGAACAACTaGAAACACGGTGTTGTGAAT +
Preference number: 5 (lower is better)
Translates to: CRFWKELRPAVPQSVPKYITKNN*KHGVVN
Trigger: ATTCACAACACCGTGTTTCAAGTTGTTCTTGGTTAT...ATACTTTGGAACAGATTGAGGAACAGCTGGACGTAGCTCTTTCCAAAATCTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
CDS-3UTR CAA 90 bp ACAAATCAGTTCCAAGCAAGTAGGTTTTTACTTTTAGCTGAACATCCTGCCATAGCAGCTTTTGGAATTTaGTGTCTGTGTTTCCTGCAC +
Preference number: 5 (lower is better)
Translates to: TNQFQASRFLLLAEHPAIAAFGI*CLCFLH
Trigger: GTGCAGGAAACACAGACACAAAATTCCAAAAGCTGC...TATGGCAGGATGTTCAGCTAAAAGTAAAAACCTACTTGCTTGGAACTGATTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
CDS-3UTR CAA 90 bp AGACTTGCTACCACAAAATTCTTCTCCAACTTGCATCAACCTGCTGATTATATCGAAGCAGTATCCTCATaGTCATGCTTTTCATGCCAT +
Preference number: 5 (lower is better)
Translates to: RLATTKFFSNLHQPADYIEAVSS*SCFSCH
Trigger: ATGGCATGAAAAGCATGACAATGAGGATACTGCTTC...GATATAATCAGCAGGTTGATGCAAGTTGGAGAAGAATTTTGTGGTAGCAAGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
CDS-3UTR CAA 90 bp CAAACATATTCTGAAAGTGCTTCACATTACACTGTGCATTTACAGACATCGCAGACAAGGTCACTGTTTTaGAAGAAGTTGAGACTGGCT +
Preference number: 5 (lower is better)
Translates to: QTYSESASHYTVHLQTSQTRSLF*KKLRLA
Trigger: AGCCAGTCTCAACTTCTTCAAAAACAGTGACCTTGT...CTGCGATGTCTGTAAATGCACAGTGTAATGTGAAGCACTTTCAGAATATGTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CAA 90 bp AGACTTGCTACCACAAAATTCTTCTCCAACTTGCATCAACCTGCTGATTATATCGTCACTGTCATACTCTaGATAGGCACTCTTTTCTTG +
Preference number: 5 (lower is better)
Translates to: RLATTKFFSNLHQPADYIVTVIL*IGTLFL
Trigger: CAAGAAAAGAGTGCCTATCAAGAGTATGACAGTGAC...GATATAATCAGCAGGTTGATGCAAGTTGGAGAAGAATTTTGTGGTAGCAAGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
CDS-3UTR CAA 90 bp TCACATAACCATTGTTATGACAAGGCGGCAACATCATTTCAGATTACAACAAATGTAGTTCACTGGCGGTaGAGACTGTCTGAGAATAGA +
Preference number: 5 (lower is better)
Translates to: SHNHCYDKAATSFQITTNVVHWR*RLSENR
Trigger: TCTATTCTCAGACAGTCTCAACCGCCAGTGAACTAC...ATTTGTTGTAATCTGAAATGATGTTGCCGCCTTGTCATAACAATGGTTATGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CAA 90 bp CTCTCCAGTCAGAAAGAACACACACAAAATTCCTTATCAGACAGTTGGCAAGAGTCATTACTGCATTTCTaGACATTGGCATATCCTTCT +
Preference number: 5 (lower is better)
Translates to: LSSQKEHTQNSLSDSWQESLLHF*TLAYPS
Trigger: AGAAGGATATGCCAATGTCAAGAAATGCAGTAATGA...CTCTTGCCAACTGTCTGATAAGGAATTTTGTGTGTGTTCTTTCTGACTGGAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CAA 90 bp ACACACAAAATTCCTTATCAGACAGTTGGCAAGAGTACATGGAAAATGGATTTTTATTCCCTGTGCTCTTaGATCCACCGTTCCATGTCA +
Preference number: 5 (lower is better)
Translates to: THKIPYQTVGKSTWKMDFYSLCS*IHRSMS
Trigger: TGACATGGAACGGTGGATCAAAGAGCACAGGGAATA...AAAATCCATTTTCCATGTACTCTTGCCAACTGTCTGATAAGGAATTTTGTGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CAA 90 bp AAGAACACACACAAAATTCCTTATCAGACAGTTGGCAAGAGTACATGGAAAATGCAAACATTCACCAGATaGGTCAGCTGCTTCGTTGAA +
Preference number: 5 (lower is better)
Translates to: KNTHKIPYQTVGKSTWKMQTFTR*VSCFVE
Trigger: TTCAACGAAGCAGCTGACCAATCTGGTGAATGTTTG...CATTTTCCATGTACTCTTGCCAACTGTCTGATAAGGAATTTTGTGTGTGTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CAA 90 bp CAAACATATTCTGAAAGTGCTTCACATTACACTGTGCATTTACAGACATCGCAGTGTCTTGCTTTCTTATaGATATGGGATCCCAGGCAA +
Preference number: 5 (lower is better)
Translates to: QTYSESASHYTVHLQTSQCLAFL*IWDPRQ
Trigger: TTGCCTGGGATCCCATATCAATAAGAAAGCAAGACA...CTGCGATGTCTGTAAATGCACAGTGTAATGTGAAGCACTTTCAGAATATGTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CAA 90 bp CATATTCTGAAAGTGCTTCACATTACACTGTGCATTTACAGACATCGCAGGGACTTCCAGAGTTCATCATaGGCTAGACTGATACTATTT +
Preference number: 5 (lower is better)
Translates to: HILKVLHITLCIYRHRRDFQSSS*ARLILF
Trigger: AAATAGTATCAGTCTAGCCAATGATGAACTCTGGAA...GTCCCTGCGATGTCTGTAAATGCACAGTGTAATGTGAAGCACTTTCAGAATATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CAA 90 bp TGCAGATTTTGGAAAGAGCTACGTCCAGCTGTTCCTCAATCTGTTCCAAAGTATTTCCAGAGTTCATCATaGGCTAGACTGATACTATTT +
Preference number: 5 (lower is better)
Translates to: CRFWKELRPAVPQSVPKYFQSSS*ARLILF
Trigger: AAATAGTATCAGTCTAGCCAATGATGAACTCTGGAA...ATACTTTGGAACAGATTGAGGAACAGCTGGACGTAGCTCTTTCCAAAATCTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649152.1
CDS-3UTR CAA 90 bp TGTTATGACAAGGCGGCAACATCATTTCAGATTACAACAAATGAGACCAAAAGTGGATTCTGTGAGCTGTaGATGTTACAGGTCATGCAT +
Preference number: 5 (lower is better)
Translates to: CYDKAATSFQITTNETKSGFCEL*MLQVMH
Trigger: ATGCATGACCTGTAACATCAACAGCTCACAGAATCC...ACTTTTGGTCTCATTTGTTGTAATCTGAAATGATGTTGCCGCCTTGTCATAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CAA 90 bp AATTTGTCTCTATACGCCTCTAATTCTTGCAAATTGAGAACAGGTGGAAGCTTCCCTCCTGTTACTGTTTaGATGCTAGCTAGCACTTAT +
Preference number: 5 (lower is better)
Translates to: NLSLYASNSCKLRTGGSFPPVTV*MLASTY
Trigger: ATAAGTGCTAGCTAGCATCAAAACAGTAACAGGAGG...GAAGCTTCCACCTGTTCTCAATTTGCAAGAATTAGAGGCGTATAGAGACAAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649152.1
CDS TCA 90 bp CAAAAGCAATACCTTCTCCCATTTGTACAGATAACAGCAGCTAATTaGAGACCTGTCTGCAATGAGGTAACTCTTTCAAGTTCCTTTACA +
Preference number: 5 (lower is better)
Translates to: QKQYLLPFVQITAAN*RPVCNEVTLSSSFT
Trigger: TGTAAAGGAACTTGAAAGAGTTACCTCATTGCAGACAGGTCTTCAATTAGCTGCTGTTATCTGTACAAATGGGAGAAGGTATTGCTTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477935.1
ENST00000485994.5
CDS GCA 90 bp GCAGCTTGCTGTTGTTTCAATTTGTCTCTATACGCCTCTAATTCTTaGAAATTGAGAACAGGTGGAAGCTCCAGCTCATATTTAACAATA +
Preference number: 5 (lower is better)
Translates to: AACCCFNLSLYASNS*KLRTGGSSSSYLTI
Trigger: TATTGTTAAATATGAGCTGGAGCTTCCACCTGTTCTCAATTTGCAAGAATTAGAGGCGTATAGAGACAAATTGAAACAACAGCAAGCTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458530.1
ENST00000477935.1
CDS CCA 90 bp ATGTCTCAAGTACTCAGTAGTTTCATGTGGCTAATGGCTATTGCATaGGACAGCACAGATTATGAACAGTTCTATCATCTTGGAAAGTTA +
Preference number: 5 (lower is better)
Translates to: MSQVLSSFMWLMAIA*DSTDYEQFYHLGKL
Trigger: TAACTTTCCAAGATGATAGAACTGTTCATAATCTGTGCTGTCCCATGCAATAGCCATTAGCCACATGAAACTACTGAGTACTTGAGACAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480943.5
CDS-3UTR CAA 90 bp CTCATTGTCATGCTTTTCATGCCATTCCATAGTCCTATAATAGCTGAGCATAACACTATTAATAAGCTCTaGTTCAGCTTGAGGGTCACT +
Preference number: 5 (lower is better)
Translates to: LIVMLFMPFHSPIIAEHNTINKL*FSLRVT
Trigger: AGTGACCCTCAAGCTGAACAAGAGCTTATTAATAGT...GTTATGCTCAGCTATTATAGGACTATGGAATGGCATGAAAAGCATGACAATGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649152.1
CDS-3UTR CAA 90 bp AATTTGTCTCTATACGCCTCTAATTCTTGCAAATTGAGAACAGGTGGAAGCTTCTCTAATTCTTGCAAATaGAGAACAGGTGGAAGCTTC +
Preference number: 5 (lower is better)
Translates to: NLSLYASNSCKLRTGGSFSNSCK*RTGGSF
Trigger: GAAGCTTCCACCTGTTCTCAATTTGCAAGAATTAGA...GAAGCTTCCACCTGTTCTCAATTTGCAAGAATTAGAGGCGTATAGAGACAAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436177.5
ENST00000438395.5
ENST00000649152.1
CDS-3UTR CAA 90 bp GCCTCTAATTCTTGCAAATTGAGAACAGGTGGAAGCTTCTCCAGCTCATATTTATACTGCAGCTTGCTGTaGTTTCAATTTGTCTCTATA +
Preference number: 5 (lower is better)
Translates to: ASNSCKLRTGGSFSSSYLYCSLL*FQFVSI
Trigger: TATAGAGACAAATTGAAACAACAGCAAGCTGCAGTA...TAAATATGAGCTGGAGAAGCTTCCACCTGTTCTCAATTTGCAAGAATTAGAGGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436177.5
ENST00000438395.5
ENST00000649152.1
CDS-3UTR CAA 90 bp GTCATGCTTTTCATGCCATTCCATAGTCCTATAATAGCTGAGCATAACTTCCCAAAGAAGTCGATAAGCTaGTTGAACCTTGGTATAATG +
Preference number: 5 (lower is better)
Translates to: VMLFMPFHSPIIAEHNFPKKSIS*LNLGIM
Trigger: CATTATACCAAGGTTCAACAAGCTTATCGACTTCTT...TGGGAAGTTATGCTCAGCTATTATAGGACTATGGAATGGCATGAAAAGCATGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
CDS-3UTR CAA 90 bp AAGAACACACACAAAATTCCTTATCAGACAGTTGGCAAGAGTACATGGAAAATGGAAGTGCATATGAAGTaGATCCATTGCTGTCTGTGT +
Preference number: 5 (lower is better)
Translates to: KNTHKIPYQTVGKSTWKMEVHMK*IHCCLC
Trigger: ACACAGACAGCAATGGATCAACTTCATATGCACTTC...CATTTTCCATGTACTCTTGCCAACTGTCTGATAAGGAATTTTGTGTGTGTTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CAA 90 bp TCTAATTCTTGCAAATTGAGAACAGGTGGAAGCTTCTCCAGCTCATATTTAACAGAAGTGCATATGAAGTaGATCCATTGCTGTCTGTGT +
Preference number: 5 (lower is better)
Translates to: SNSCKLRTGGSFSSSYLTEVHMK*IHCCLC
Trigger: ACACAGACAGCAATGGATCAACTTCATATGCACTTC...TGTTAAATATGAGCTGGAGAAGCTTCCACCTGTTCTCAATTTGCAAGAATTAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649152.1
CDS-3UTR CAA 90 bp ACACACAAAATTCCTTATCAGACAGTTGGCAAGAGTACATGGAAAATGGATTTTGCAGCTTTTGGAATTTaGTGTCTGTGTTTCCTGCAC +
Preference number: 5 (lower is better)
Translates to: THKIPYQTVGKSTWKMDFAAFGI*CLCFLH
Trigger: GTGCAGGAAACACAGACACAAAATTCCAAAAGCTGC...AAAATCCATTTTCCATGTACTCTTGCCAACTGTCTGATAAGGAATTTTGTGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CAA 90 bp TCACATAACCATTGTTATGACAAGGCGGCAACATCATTTCAGATTACAACAAATGCAGCTTTTGGAATTTaGTGTCTGTGTTTCCTGCAC +
Preference number: 5 (lower is better)
Translates to: SHNHCYDKAATSFQITTNAAFGI*CLCFLH
Trigger: GTGCAGGAAACACAGACACAAAATTCCAAAAGCTGC...ATTTGTTGTAATCTGAAATGATGTTGCCGCCTTGTCATAACAATGGTTATGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000305866.10
ENST00000441602.5
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CAA 90 bp ATGTATAACTGTAGTCACATAACCATTGTTATGACAAGGCGGCAACATCATTTCTCAATTCCTATTACCTaGGAAAACACTGGGCTCTAC +
Preference number: 5 (lower is better)
Translates to: MYNCSHITIVMTRRQHHFSIPIT*ENTGLY
Trigger: GTAGAGCCCAGTGTTTTCCAAGGTAATAGGAATTGA...GAAATGATGTTGCCGCCTTGTCATAACAATGGTTATGTGACTACAGTTATACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CAA 90 bp AGAACAGGTGGAAGCTTCTCCAGCTCATATTTAACAATATCAAATGAATCCACATCAATTCCTATTACCTaGGAAAACACTGGGCTCTAC +
Preference number: 5 (lower is better)
Translates to: RTGGSFSSSYLTISNESTSIPIT*ENTGLY
Trigger: GTAGAGCCCAGTGTTTTCCAAGGTAATAGGAATTGA...TGTGGATTCATTTGATATTGTTAAATATGAGCTGGAGAAGCTTCCACCTGTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649152.1
CDS-3UTR CAA 90 bp AGAACAGGTGGAAGCTTCTCCAGCTCATATTTAACAATATCAAATGAATCCACAACTATTAATAAGCTCTaGTTCAGCTTGAGGGTCACT +
Preference number: 5 (lower is better)
Translates to: RTGGSFSSSYLTISNESTTINKL*FSLRVT
Trigger: AGTGACCCTCAAGCTGAACAAGAGCTTATTAATAGT...TGTGGATTCATTTGATATTGTTAAATATGAGCTGGAGAAGCTTCCACCTGTTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436177.5
ENST00000438395.5
ENST00000649152.1
CDS-3UTR CAA 90 bp ACACACAAAATTCCTTATCAGACAGTTGGCAAGAGTACATGGAAAATGGATTTTAAATTCTTGCAGATTTaGGAAAGAGCTACGTCCAGC +
Preference number: 5 (lower is better)
Translates to: THKIPYQTVGKSTWKMDFKFLQI*ERATSS
Trigger: GCTGGACGTAGCTCTTTCCAAAATCTGCAAGAATTT...AAAATCCATTTTCCATGTACTCTTGCCAACTGTCTGATAAGGAATTTTGTGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CAA 90 bp TCACATAACCATTGTTATGACAAGGCGGCAACATCATTTCAGATTACAACAAATGAAGTGCATATGAAGTaGATCCATTGCTGTCTGTGT +
Preference number: 5 (lower is better)
Translates to: SHNHCYDKAATSFQITTNEVHMK*IHCCLC
Trigger: ACACAGACAGCAATGGATCAACTTCATATGCACTTC...ATTTGTTGTAATCTGAAATGATGTTGCCGCCTTGTCATAACAATGGTTATGTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000305866.10
ENST00000441602.5
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CAA 90 bp AGACTTGCTACCACAAAATTCTTCTCCAACTTGCATCAACCTGCTGATTATATCATAACCAAGAACAACTaGAAACACGGTGTTGTGAAT +
Preference number: 5 (lower is better)
Translates to: RLATTKFFSNLHQPADYIITKNN*KHGVVN
Trigger: ATTCACAACACCGTGTTTCAAGTTGTTCTTGGTTAT...GATATAATCAGCAGGTTGATGCAAGTTGGAGAAGAATTTTGTGGTAGCAAGTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
CDS-3UTR CAA 90 bp ATGTATAACTGTAGTCACATAACCATTGTTATGACAAGGCGGCAACATCATTTCATAGGCACTCTTTTCTaGTTCATCAGATTCATACCC +
Preference number: 5 (lower is better)
Translates to: MYNCSHITIVMTRRQHHFIGTLF*FIRFIP
Trigger: GGGTATGAATCTGATGAACAAGAAAAGAGTGCCTAT...GAAATGATGTTGCCGCCTTGTCATAACAATGGTTATGTGACTACAGTTATACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000305866.10
ENST00000441602.5
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CAA 90 bp AATTTGTCTCTATACGCCTCTAATTCTTGCAAATTGAGAACAGGTGGAAGCTTCTCATTACTGCATTTCTaGACATTGGCATATCCTTCT +
Preference number: 5 (lower is better)
Translates to: NLSLYASNSCKLRTGGSFSLLHF*TLAYPS
Trigger: AGAAGGATATGCCAATGTCAAGAAATGCAGTAATGA...GAAGCTTCCACCTGTTCTCAATTTGCAAGAATTAGAGGCGTATAGAGACAAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649152.1
CDS-3UTR CAA 90 bp ATTATGCTTATTAAGAACCAAGCTCAGAGGGTAGAAAAGTGCCAACTTCATTTTCCTCCTGTTACTGTTTaGATGCTAGCTAGCACTTAT +
Preference number: 5 (lower is better)
Translates to: IMLIKNQAQRVEKCQLHFPPVTV*MLASTY
Trigger: ATAAGTGCTAGCTAGCATCAAAACAGTAACAGGAGG...AAAATGAAGTTGGCACTTTTCTACCCTCTGAGCTTGGTTCTTAATAAGCATAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CAA 90 bp TCTAATTCTTGCAAATTGAGAACAGGTGGAAGCTTCTCCAGCTCATATTTAACAGAGAGATTTGATTTTTaGCATATCGAAATCCTGAGG +
Preference number: 5 (lower is better)
Translates to: SNSCKLRTGGSFSSSYLTERFDF*HIEILR
Trigger: CCTCAGGATTTCGATATGCAAAAAATCAAATCTCTC...TGTTAAATATGAGCTGGAGAAGCTTCCACCTGTTCTCAATTTGCAAGAATTAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000436177.5
ENST00000438395.5
ENST00000649152.1
CDS-3UTR CAA 90 bp AGAACAGGTGGAAGCTTCTCCAGCTCATATTTAACAATATCAAATGAATCCACAGAGAGATTTGATTTTTaGCATATCGAAATCCTGAGG +
Preference number: 5 (lower is better)
Translates to: RTGGSFSSSYLTISNESTERFDF*HIEILR
Trigger: CCTCAGGATTTCGATATGCAAAAAATCAAATCTCTC...TGTGGATTCATTTGATATTGTTAAATATGAGCTGGAGAAGCTTCCACCTGTTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000436177.5
ENST00000438395.5
ENST00000649152.1
CDS-3UTR CAA 90 bp ATGTATAACTGTAGTCACATAACCATTGTTATGACAAGGCGGCAACATCATTTCGAGAGATTTGATTTTTaGCATATCGAAATCCTGAGG +
Preference number: 5 (lower is better)
Translates to: MYNCSHITIVMTRRQHHFERFDF*HIEILR
Trigger: CCTCAGGATTTCGATATGCAAAAAATCAAATCTCTC...GAAATGATGTTGCCGCCTTGTCATAACAATGGTTATGTGACTACAGTTATACAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000305866.10
ENST00000441602.5
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CAA 90 bp ATTATGCTTATTAAGAACCAAGCTCAGAGGGTAGAAAAGTGCCAACTTCATTTTTCTAATTCTTGCAAATaGAGAACAGGTGGAAGCTTC +
Preference number: 5 (lower is better)
Translates to: IMLIKNQAQRVEKCQLHFSNSCK*RTGGSF
Trigger: GAAGCTTCCACCTGTTCTCAATTTGCAAGAATTAGA...AAAATGAAGTTGGCACTTTTCTACCCTCTGAGCTTGGTTCTTAATAAGCATAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CAA 90 bp TGTTATGACAAGGCGGCAACATCATTTCAGATTACAACAAATGAGACCAAAAGTTACTGCAGCTTGCTGTaGTTTCAATTTGTCTCTATA +
Preference number: 5 (lower is better)
Translates to: CYDKAATSFQITTNETKSYCSLL*FQFVSI
Trigger: TATAGAGACAAATTGAAACAACAGCAAGCTGCAGTA...ACTTTTGGTCTCATTTGTTGTAATCTGAAATGATGTTGCCGCCTTGTCATAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000305866.10
ENST00000441602.5
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CAA 90 bp ACAGGTGGAAGCTTCTCCAGCTCATATTTAACAATATCAAATGAATCCACAGAATTTAGATACTGCAGCTaGCTGTTGTTTCAATTTGTC +
Preference number: 5 (lower is better)
Translates to: TGGSFSSSYLTISNESTEFRYCS*LLFQFV
Trigger: GACAAATTGAAACAACAGCAAGCTGCAGTATCTAAA...TTCTGTGGATTCATTTGATATTGTTAAATATGAGCTGGAGAAGCTTCCACCTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436177.5
ENST00000438395.5
ENST00000649152.1
CDS-3UTR CAA 90 bp TCTAATTCTTGCAAATTGAGAACAGGTGGAAGCTTCTCCAGCTCATATTTAACATTTAGATACTGCAGCTaGCTGTTGTTTCAATTTGTC +
Preference number: 5 (lower is better)
Translates to: SNSCKLRTGGSFSSSYLTFRYCS*LLFQFV
Trigger: GACAAATTGAAACAACAGCAAGCTGCAGTATCTAAA...TGTTAAATATGAGCTGGAGAAGCTTCCACCTGTTCTCAATTTGCAAGAATTAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436177.5
ENST00000438395.5
ENST00000649152.1
CDS-3UTR CAA 90 bp TGTTATGACAAGGCGGCAACATCATTTCAGATTACAACAAATGAGACCAAAAGTCTGCATTTCTTGACATaGGCATATCCTTCTACAATA +
Preference number: 5 (lower is better)
Translates to: CYDKAATSFQITTNETKSLHFLT*AYPSTI
Trigger: TATTGTAGAAGGATATGCCAATGTCAAGAAATGCAG...ACTTTTGGTCTCATTTGTTGTAATCTGAAATGATGTTGCCGCCTTGTCATAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000305866.10
ENST00000441602.5
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CAA 90 bp TTCCTTATCAGACAGTTGGCAAGAGTACATGGAAAATGGATTTTTATGTCACATAAGCTTATCTCATGTTaGTTTTCTTCAAGTGGCTGC +
Preference number: 5 (lower is better)
Translates to: FLIRQLARVHGKWIFMSHKLISC*FSSSGC
Trigger: GCAGCCACTTGAAGAAAACAAACATGAGATAAGCTT...ATGTGACATAAAAATCCATTTTCCATGTACTCTTGCCAACTGTCTGATAAGGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CAA 90 bp ACACACAAAATTCCTTATCAGACAGTTGGCAAGAGTACATGGAAAATGGATTTTGAGAGATTTGATTTTTaGCATATCGAAATCCTGAGG +
Preference number: 5 (lower is better)
Translates to: THKIPYQTVGKSTWKMDFERFDF*HIEILR
Trigger: CCTCAGGATTTCGATATGCAAAAAATCAAATCTCTC...AAAATCCATTTTCCATGTACTCTTGCCAACTGTCTGATAAGGAATTTTGTGTGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CAA 90 bp TTCCTTATCAGACAGTTGGCAAGAGTACATGGAAAATGGATTTTTATGTCACATTACTGCAGCTTGCTGTaGTTTCAATTTGTCTCTATA +
Preference number: 5 (lower is better)
Translates to: FLIRQLARVHGKWIFMSHYCSLL*FQFVSI
Trigger: TATAGAGACAAATTGAAACAACAGCAAGCTGCAGTA...ATGTGACATAAAAATCCATTTTCCATGTACTCTTGCCAACTGTCTGATAAGGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CAA 90 bp AATTTCTTTTACATCCCATTTCACATTAGCCATGAGAAGCAGCATCTGTTCATATACTGCAGCTTGCTGTaGTTTCAATTTGTCTCTATA +
Preference number: 5 (lower is better)
Translates to: NFFYIPFHISHEKQHLFIYCSLL*FQFVSI
Trigger: TATAGAGACAAATTGAAACAACAGCAAGCTGCAGTA...TATGAACAGATGCTGCTTCTCATGGCTAATGTGAAATGGGATGTAAAAGAAATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441602.5
ENST00000649152.1
CDS-3UTR CAA 90 bp TCACATAACCATTGTTATGACAAGGCGGCAACATCATTTCAGATTACAACAAATAAGAAGTCGATAAGCTaGTTGAACCTTGGTATAATG +
Preference number: 5 (lower is better)
Translates to: SHNHCYDKAATSFQITTNKKSIS*LNLGIM
Trigger: CATTATACCAAGGTTCAACAAGCTTATCGACTTCTT...ATTTGTTGTAATCTGAAATGATGTTGCCGCCTTGTCATAACAATGGTTATGTGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000305866.10
ENST00000441602.5
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CAA 90 bp AATTCTCATGCAGTGCTCATAATTAGGAGATACTACATATTCACCCTCACATTATATGAAGTTGATCCATaGCTGTCTGTGTTTTTCCAA +
Preference number: 5 (lower is better)
Translates to: NSHAVLIIRRYYIFTLTLYEVDP*LSVFFQ
Trigger: TTGGAAAAACACAGACAGCAATGGATCAACTTCATA...TAATGTGAGGGTGAATATGTAGTATCTCCTAATTATGAGCACTGCATGAGAATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000305866.10
ENST00000441602.5
ENST00000544910.5
ENST00000649152.1
CDS-3UTR CAA 90 bp AATTCTCATGCAGTGCTCATAATTAGGAGATACTACATATTCACCCTCACATTATTCCAGAGTTCATCATaGGCTAGACTGATACTATTT +
Preference number: 5 (lower is better)
Translates to: NSHAVLIIRRYYIFTLTLFQSSS*ARLILF
Trigger: AAATAGTATCAGTCTAGCCAATGATGAACTCTGGAA...TAATGTGAGGGTGAATATGTAGTATCTCCTAATTATGAGCACTGCATGAGAATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305866.10
ENST00000544910.5
ENST00000649152.1
CDS TCA 72 bp CAGGGACCCGGAGACTCTCTATGGCACCAAGATCACTaGGGCTTTCTTGAGGGCTTTTCAGACCCTGTCGGG +
Preference number: 6 (lower is better)
Translates to: QGPGDSLWHQDH*GFLEGFSDPVG
Trigger: CCCGACAGGGTCTGAAAAGCCCTCAAGAAAGCCTCAGTGATCTTGGTGCCATAGAGAGTCTCCGGGTCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000251739.9
ENST00000305866.10
ENST00000436177.5
ENST00000438395.5
ENST00000441602.5
ENST00000458530.1
ENST00000477935.1
ENST00000485994.5
ENST00000544910.5
ENST00000649152.1
CDS GCA 72 bp CTGCTGATCAAGAGAAGCACACCCTGTGTATTCAAATaGCTTTCCAGGGACCCGGAGACTCTCTATGGCACC +
Preference number: 6 (lower is better)
Translates to: LLIKRSTPCVFK*LSRDPETLYGT
Trigger: GGTGCCATAGAGAGTCTCCGGGTCCCTGGAAAGGCATTTGAATACACAGGGTGTGCTTCTCTTGATCAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649152.1
CDS TCA 72 bp AGACTCTCTATGGCACCAAGATCACTGAGGCTTTCTTaGGGGCTTTTCAGACCCTGTCGGGTCATGAGAGAT +
Preference number: 6 (lower is better)
Translates to: RLSMAPRSLRLS*GLFRPCRVMRD
Trigger: ATCTCTCATGACCCGACAGGGTCTGAAAAGCCCTCAAGAAAGCCTCAGTGATCTTGGTGCCATAGAGAGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000251739.9
ENST00000305866.10
ENST00000436177.5
ENST00000438395.5
ENST00000441602.5
ENST00000458530.1
ENST00000477935.1
ENST00000485994.5
ENST00000544910.5
ENST00000649152.1
CDS CAA 90 bp TTGAGGGCTTTTCAGACCCTGTCGGGTCATGAGAGATTTGATTTTTaGCATATCGAAATCCTGAGGAGGGTACCCTGCCTCAAAGAGCTA +
Preference number: 6 (lower is better)
Translates to: LRAFQTLSGHERFDF*HIEILRRVPCLKEL
Trigger: TAGCTCTTTGAGGCAGGGTACCCTCCTCAGGATTTCGATATGCAAAAAATCAAATCTCTCATGACCCGACAGGGTCTGAAAAGCCCTCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000251739.9
ENST00000305866.10
ENST00000436177.5
ENST00000438395.5
ENST00000441602.5
ENST00000458530.1
ENST00000477935.1
ENST00000485994.5
ENST00000544910.5
ENST00000649152.1
CDS CAA 72 bp TTTCAGACCCTGTCGGGTCATGAGAGATTTGATTTTTaGCATATCGAAATCCTGAGGAGGGTACCCTGCCTC +
Preference number: 6 (lower is better)
Translates to: FQTLSGHERFDF*HIEILRRVPCL
Trigger: GAGGCAGGGTACCCTCCTCAGGATTTCGATATGCAAAAAATCAAATCTCTCATGACCCGACAGGGTCTGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000251739.9
ENST00000305866.10
ENST00000436177.5
ENST00000438395.5
ENST00000441602.5
ENST00000458530.1
ENST00000477935.1
ENST00000485994.5
ENST00000544910.5
ENST00000649152.1
CDS GCA 72 bp TCTGCTCTGCTGTCTTCTGTTTCAACTGCTCAACTATaGCACTGTAGCACAAAAGCAGCTACAGACAGACAA +
Preference number: 6 (lower is better)
Translates to: SALLSSVSTAQL*HCSTKAATDRQ
Trigger: TTGTCTGTCTGTAGCTGCTTTTGTGCTACAGTGGCATAGTTGAGCAGTTGAAACAGAAGACAGCAGAGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467326.5
CDS TCA 72 bp ACTGATTCAGTTACACAGCCATGTAGTCAACAGGAGTaGTGCAGTCTAATTTGTGGTCGGGAAAACTCATCG +
Preference number: 6 (lower is better)
Translates to: TDSVTQPCSQQE*CSLICGRENSS
Trigger: CGATGAGTTTTCCCGACCACAAATTAGACTGCATCACTCCTGTTGACTACATGGCTGTGTAACTGAATCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471188.5
CDS TCA 72 bp ATTTTGAGGGAGTCATGCTGGCTATCTAACAACACGTaGAGCTGCAAATTAGGAAGTCCTGTTTCAGAACCA +
Preference number: 6 (lower is better)
Translates to: ILRESCWLSNNT*SCKLGSPVSEP
Trigger: TGGTTCTGAAACAGGACTTCCTAATTTGCAGCTTCACGTGTTGTTAGATAGCCAGCATGACTCCCTCAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495039.1
CDS GCA 72 bp CATATATTTTCCGCACAGTCTCTGTGGCAACAATTCTaGTCTGCTGTCTTCTGTTTCAACTGCTCAACTATG +
Preference number: 6 (lower is better)
Translates to: HIFSAQSLWQQF*SAVFCFNCSTM
Trigger: CATAGTTGAGCAGTTGAAACAGAAGACAGCAGAGCAGAATTGTTGCCACAGAGACTGTGCGGAAAATATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467326.5
CDS CCA 72 bp ACAGTAGCCATGTCTCAAGTACTCAGTAGTTTCATGTaGCTAATGGCTATTGCATGGGACAGCACAGATTAT +
Preference number: 6 (lower is better)
Translates to: TVAMSQVLSSFM*LMAIAWDSTDY
Trigger: ATAATCTGTGCTGTCCCATGCAATAGCCATTAGCCACATGAAACTACTGAGTACTTGAGACATGGCTACTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480943.5
CDS CAA 90 bp TTCCACATAACCAAGAACAACTTGAAACACGGTGTTGTGAATGGCTaGGGTGAAGTGCATATGAAGTTGATCCATTGCTGTCTGTGGAAA +
Preference number: 6 (lower is better)
Translates to: FHITKNNLKHGVVNG*GEVHMKLIHCCLWK
Trigger: TTTCCACAGACAGCAATGGATCAACTTCATATGCACTTCACCCAAGCCATTCACAACACCGTGTTTCAAGTTGTTCTTGGTTATGTGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485140.1
CDS TCA 72 bp GTGGCTAATGGCTATTGCATGGGACAGCACAGATTATaGACAGTTCTATCATCTTGGAAAGTTATATTGGAG +
Preference number: 6 (lower is better)
Translates to: VANGYCMGQHRL*TVLSSWKVILE
Trigger: CTCCAATATAACTTTCCAAGATGATAGAACTGTTCATAATCTGTGCTGTCCCATGCAATAGCCATTAGCCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480943.5
CDS CCA 72 bp GTACTCAGTAGTTTCATGTGGCTAATGGCTATTGCATaGGACAGCACAGATTATGAACAGTTCTATCATCTT +
Preference number: 6 (lower is better)
Translates to: VLSSFMWLMAIA*DSTDYEQFYHL
Trigger: AAGATGATAGAACTGTTCATAATCTGTGCTGTCCCATGCAATAGCCATTAGCCACATGAAACTACTGAGTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480943.5
CDS CCA 72 bp AGCTTTTTGACATTCAAGGCACAACTGAATAGCTCCTaGATAATCTTCCTCCTTAAGGTAACAACAACAGGA +
Preference number: 6 (lower is better)
Translates to: SFLTFKAQLNSS*IIFLLKVTTTG
Trigger: TCCTGTTGTTGTTACCTTAAGGAGGAAGATTATCCAGGAGCTATTCAGTTGTGCCTTGAATGTCAAAAAGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495039.1
CDS GCA 72 bp ACATCAAAGGCAATTGGCTTAAGAATGTTCATCATCTaGATATATTTTCCGCACAGTCTCTGTGGCAACAAT +
Preference number: 6 (lower is better)
Translates to: TSKAIGLRMFII*IYFPHSLCGNN
Trigger: ATTGTTGCCACAGAGACTGTGCGGAAAATATATGCAGATGATGAACATTCTTAAGCCAATTGCCTTTGATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467326.5
CDS GCA 72 bp TTTACCTTTCTAGGTATTCTGATGCCAGGCAACGAATaGCTTGGATATGAGTTTATGTACATTCTTGGACTT +
Preference number: 6 (lower is better)
Translates to: FTFLGILMPGNE*LGYEFMYILGL
Trigger: AAGTCCAAGAATGTACATAAACTCATATCCAAGGCATTCGTTGCCTGGCATCAGAATACCTAGAAAGGTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471188.5
CDS CAA 72 bp TTCAATTTGTCTCTATACGCCTCTAATTCTTGCAAATaGAGAACAGGTGGAAGCTTACGTGTAGCTCAATAC +
Preference number: 6 (lower is better)
Translates to: FNLSLYASNSCK*RTGGSLRVAQY
Trigger: GTATTGAGCTACACGTAAGCTTCCACCTGTTCTCAATTTGCAAGAATTAGAGGCGTATAGAGACAAATTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441602.5
CDS CAA 90 bp AGAAAAATATACTTGTTCAATACTATTAATAAGCTCTTGTTCAGCTaGAGGGTCACTTGGCTGTTCTCGAAGTTCCCTGAATTCTTCACG +
Preference number: 6 (lower is better)
Translates to: RKIYLFNTINKLLFS*RVTWLFSKFPEFFT
Trigger: CGTGAAGAATTCAGGGAACTTCGAGAACAGCCAAGTGACCCTCAAGCTGAACAAGAGCTTATTAATAGTATTGAACAAGTATATTTTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436177.5
CDS CAA 72 bp TTCAATTTGTCTCTATACGCCTCTAATTCTTGCAAATaGAGAACAGGTGGAAGCTCCAGCTCATATTTAACA +
Preference number: 6 (lower is better)
Translates to: FNLSLYASNSCK*RTGGSSSSYLT
Trigger: TGTTAAATATGAGCTGGAGCTTCCACCTGTTCTCAATTTGCAAGAATTAGAGGCGTATAGAGACAAATTGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458530.1
ENST00000477935.1