RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for VPS39 (Homo sapiens)

Ensembl gene IDs: ENSG00000166887

Ensembl transcript IDs: ENST00000318006.10, ENST00000348544.4, ENST00000561797.1, ENST00000561818.1, ENST00000562258.5, ENST00000562662.1, ENST00000563692.1, ENST00000564994.5, ENST00000568029.5, ENST00000568357.1, ENST00000568755.1, ENST00000570023.1, ENST00000570062.1, ENST00000614932.1

Found 439 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCCCCGGGCAGCACTGCTTCTGTGTGGGTATGGCCAGTCGGGACGTaGCGCCACACACTGCTCCTCCGAACTCTGGTGAAGGGCTGCCCA +
Preference number: 1 (lower is better)
Translates to: APGSTASVWVWPVGT*RHTLLLRTLVKGCP
Trigger: TGGGCAGCCCTTCACCAGAGTTCGGAGGAGCAGTGTGTGGCGCCACGTCCCGACTGGCCATACCCACACAGAAGCAGTGCTGCCCGGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
3UTR TCA 90 bp GGCCAGTCGGGACGTGGCGCCACACACTGCTCCTCCGAACTCTGGTaGAGGGCTGCCCAGCCTCACAGGCCTGAGCAGAGTCTCCCACAT +
Preference number: 1 (lower is better)
Translates to: GQSGRGATHCSSELW*RAAQPHRPEQSLPH
Trigger: ATGTGGGAGACTCTGCTCAGGCCTGTGAGGCTGGGCAGCCCTTCACCAGAGTTCGGAGGAGCAGTGTGTGGCGCCACGTCCCGACTGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318006.10
3UTR TCA 90 bp CTTCCCTGCTGCTCCTGGAGGAAGCAGAGTCCAAGCTGGCCCAGATaGGGCCCCGGGCAGCACTGCTTCTGTGTGGGTATGGCCAGTCGG +
Preference number: 1 (lower is better)
Translates to: LPCCSWRKQSPSWPR*GPGQHCFCVGMASR
Trigger: CCGACTGGCCATACCCACACAGAAGCAGTGCTGCCCGGGGCCTCATCTGGGCCAGCTTGGACTCTGCTTCCTCCAGGAGCAGCAGGGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
3UTR GCA 90 bp AGGGATCACGCATACCCCAGACAGGGCAGGCCCATCCTCAGGAGCTaGAGTCACACTCAGCCCGGCCTGAGGCAAGGGATGCAGGGCCTT +
Preference number: 1 (lower is better)
Translates to: RDHAYPRQGRPILRS*SHTQPGLRQGMQGL
Trigger: AAGGCCCTGCATCCCTTGCCTCAGGCCGGGCTGAGTGTGACTGCAGCTCCTGAGGATGGGCCTGCCCTGTCTGGGGTATGCGTGATCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
3UTR CCA 90 bp CTGCCCAGCCTCACAGGCCTGAGCAGAGTCTCCCACATCTGCGAATaGGGCCAATGGCACTCACTGTCTCTTCAGGCCCCCACGGACGGC +
Preference number: 1 (lower is better)
Translates to: LPSLTGLSRVSHICE*GQWHSLSLQAPTDG
Trigger: GCCGTCCGTGGGGGCCTGAAGAGACAGTGAGTGCCATTGGCCCCATTCGCAGATGTGGGAGACTCTGCTCAGGCCTGTGAGGCTGGGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318006.10
3UTR GCA 90 bp GAAGGGCTGCCCAGCCTCACAGGCCTGAGCAGAGTCTCCCACATCTaGGAATGGGGCCAATGGCACTCACTGTCTCTTCAGGCCCCCACG +
Preference number: 1 (lower is better)
Translates to: EGLPSLTGLSRVSHI*EWGQWHSLSLQAPT
Trigger: CGTGGGGGCCTGAAGAGACAGTGAGTGCCATTGGCCCCATTCGCAGATGTGGGAGACTCTGCTCAGGCCTGTGAGGCTGGGCAGCCCTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318006.10
3UTR CCA 90 bp CTCACAGGCCTGAGCAGAGTCTCCCACATCTGCGAATGGGGCCAATaGCACTCACTGTCTCTTCAGGCCCCCACGGACGGCATGCCTGGG +
Preference number: 1 (lower is better)
Translates to: LTGLSRVSHICEWGQ*HSLSLQAPTDGMPG
Trigger: CCCAGGCATGCCGTCCGTGGGGGCCTGAAGAGACAGTGAGTGCCATTGGCCCCATTCGCAGATGTGGGAGACTCTGCTCAGGCCTGTGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318006.10
3UTR TCA 90 bp CTGCTCCTCCGAACTCTGGTGAAGGGCTGCCCAGCCTCACAGGCCTaGGCAGAGTCTCCCACATCTGCGAATGGGGCCAATGGCACTCAC +
Preference number: 1 (lower is better)
Translates to: LLLRTLVKGCPASQA*AESPTSANGANGTH
Trigger: GTGAGTGCCATTGGCCCCATTCGCAGATGTGGGAGACTCTGCTCAGGCCTGTGAGGCTGGGCAGCCCTTCACCAGAGTTCGGAGGAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
3UTR CCA 90 bp TGGTGGCAGCCAGGATTCCTAAGGCCAGGTGCTCCTTCACCTCTCTaGGAGAGCCAAGCTGTCCATCCGCTGGATCCCCAGGATGCTGGG +
Preference number: 1 (lower is better)
Translates to: WWQPGFLRPGAPSPL*ESQAVHPLDPQDAG
Trigger: CCCAGCATCCTGGGGATCCAGCGGATGGACAGCTTGGCTCTCCCAGAGAGGTGAAGGAGCACCTGGCCTTAGGAATCCTGGCTGCCACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318006.10
ENST00000564994.5
3UTR GCA 90 bp GCAGCACGCCATTGTCAGTTCCAGGTCCACTCATCCCCTGCGTGTTaGCGGGACCCACCTTCCTGCGCTATCCCAGCACAACTCTCCAAC +
Preference number: 1 (lower is better)
Translates to: AARHCQFQVHSSPAC*RDPPSCAIPAQLSN
Trigger: GTTGGAGAGTTGTGCTGGGATAGCGCAGGAAGGTGGGTCCCGGCAACACGCAGGGGATGAGTGGACCTGGAACTGACAATGGCGTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
3UTR TCA 90 bp GCCCGGCCTGAGGCAAGGGATGCAGGGCCTTGCCTAGGCAGAGAATaGTGCTCTCCGAGGCATCTAGGCATGGAGTGTATGGCCAAAGAG +
Preference number: 1 (lower is better)
Translates to: ARPEARDAGPCLGRE*CSPRHLGMECMAKE
Trigger: CTCTTTGGCCATACACTCCATGCCTAGATGCCTCGGAGAGCATCATTCTCTGCCTAGGCAAGGCCCTGCATCCCTTGCCTCAGGCCGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318006.10
3UTR GCA 90 bp ACACTTGGCAGCACGCCATTGTCAGTTCCAGGTCCACTCATCCCCTaGGTGTTGCCGGGACCCACCTTCCTGCGCTATCCCAGCACAACT +
Preference number: 1 (lower is better)
Translates to: TLGSTPLSVPGPLIP*VLPGPTFLRYPSTT
Trigger: AGTTGTGCTGGGATAGCGCAGGAAGGTGGGTCCCGGCAACACGCAGGGGATGAGTGGACCTGGAACTGACAATGGCGTGCTGCCAAGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
3UTR CCA 90 bp CAGGTGCTCCTTCACCTCTCTGGGAGAGCCAAGCTGTCCATCCGCTaGATCCCCAGGATGCTGGGCTCAAGTGTCAGCTGGGTTTACCTC +
Preference number: 1 (lower is better)
Translates to: QVLLHLSGRAKLSIR*IPRMLGSSVSWVYL
Trigger: GAGGTAAACCCAGCTGACACTTGAGCCCAGCATCCTGGGGATCCAGCGGATGGACAGCTTGGCTCTCCCAGAGAGGTGAAGGAGCACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564994.5
3UTR TCA 90 bp CCCAGAGCACAAAATCGCCACGCACAAAGACTAAGCCAGCCTGCCTaGGTGTCTGGTGAGCGAAGACGGAGCAGGCACCTCTGTGGGAAC +
Preference number: 1 (lower is better)
Translates to: PRAQNRHAQRLSQPA*VSGERRRSRHLCGN
Trigger: GTTCCCACAGAGGTGCCTGCTCCGTCTTCGCTCACCAGACACTCAGGCAGGCTGGCTTAGTCTTTGTGCGTGGCGATTTTGTGCTCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
3UTR GCA 90 bp TTCCAGGTCCACTCATCCCCTGCGTGTTGCCGGGACCCACCTTCCTaGGCTATCCCAGCACAACTCTCCAACCACACCATTGCTGAACAA +
Preference number: 1 (lower is better)
Translates to: FQVHSSPACCRDPPS*AIPAQLSNHTIAEQ
Trigger: TTGTTCAGCAATGGTGTGGTTGGAGAGTTGTGCTGGGATAGCGCAGGAAGGTGGGTCCCGGCAACACGCAGGGGATGAGTGGACCTGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
3UTR CCA 90 bp TGTGTCATCAGCCTGCAGTGCCTGAAACTCCAGCCTGTGCACCTCTaGCAGGATGCCCCACACTGCTCCACAGGTTTGGCGGTGAGTTAT +
Preference number: 1 (lower is better)
Translates to: CVISLQCLKLQPVHL*QDAPHCSTGLAVSY
Trigger: ATAACTCACCGCCAAACCTGTGGAGCAGTGTGGGGCATCCTGCCAGAGGTGCACAGGCTGGAGTTTCAGGCACTGCAGGCTGATGACACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
3UTR GCA 90 bp ACCTCTCTGGGAGAGCCAAGCTGTCCATCCGCTGGATCCCCAGGATaGTGGGCTCAAGTGTCAGCTGGGTTTACCTCTTTGGAACAGAAG +
Preference number: 1 (lower is better)
Translates to: TSLGEPSCPSAGSPG*WAQVSAGFTSLEQK
Trigger: CTTCTGTTCCAAAGAGGTAAACCCAGCTGACACTTGAGCCCAGCATCCTGGGGATCCAGCGGATGGACAGCTTGGCTCTCCCAGAGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564994.5
3UTR TCA 90 bp AAATCGCCACGCACAAAGACTAAGCCAGCCTGCCTGAGTGTCTGGTaGGCGAAGACGGAGCAGGCACCTCTGTGGGAACATGTATCTAGG +
Preference number: 1 (lower is better)
Translates to: KSPRTKTKPACLSVW*AKTEQAPLWEHVSR
Trigger: CCTAGATACATGTTCCCACAGAGGTGCCTGCTCCGTCTTCGCTCACCAGACACTCAGGCAGGCTGGCTTAGTCTTTGTGCGTGGCGATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318006.10
3UTR TCA 90 bp CAGCACAACTCTCCAACCACACCATTGCTGAACAAAGCTGGGGAGTaGCGGCCAGGGCAGGCTGTAAGGCAAGTGAATGGAAACTGGCTG +
Preference number: 1 (lower is better)
Translates to: QHNSPTTPLLNKAGE*RPGQAVRQVNGNWL
Trigger: CAGCCAGTTTCCATTCACTTGCCTTACAGCCTGCCCTGGCCGTCACTCCCCAGCTTTGTTCAGCAATGGTGTGGTTGGAGAGTTGTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
3UTR GCA 90 bp CAGCCTGCAGTGCCTGAAACTCCAGCCTGTGCACCTCTGGCAGGATaGCCCACACTGCTCCACAGGTTTGGCGGTGAGTTATTTTTAAAC +
Preference number: 1 (lower is better)
Translates to: QPAVPETPACAPLAG*PTLLHRFGGELFLN
Trigger: GTTTAAAAATAACTCACCGCCAAACCTGTGGAGCAGTGTGGGGCATCCTGCCAGAGGTGCACAGGCTGGAGTTTCAGGCACTGCAGGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318006.10
3UTR CCA 90 bp GCTATCCCAGCACAACTCTCCAACCACACCATTGCTGAACAAAGCTaGGGAGTGACGGCCAGGGCAGGCTGTAAGGCAAGTGAATGGAAA +
Preference number: 1 (lower is better)
Translates to: AIPAQLSNHTIAEQS*GVTARAGCKASEWK
Trigger: TTTCCATTCACTTGCCTTACAGCCTGCCCTGGCCGTCACTCCCCAGCTTTGTTCAGCAATGGTGTGGTTGGAGAGTTGTGCTGGGATAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318006.10
3UTR TCA 90 bp GGACGGCATGCCTGGGGAAGCCTAGTCTACTTACCATCAGCACGTTaGTCTGTCACACAGCATGGAGCCATAGTTTACAAAGGACCACGG +
Preference number: 1 (lower is better)
Translates to: GRHAWGSLVYLPSAR*SVTQHGAIVYKGPR
Trigger: CCGTGGTCCTTTGTAAACTATGGCTCCATGCTGTGTGACAGATCAACGTGCTGATGGTAAGTAGACTAGGCTTCCCCAGGCATGCCGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
3UTR CCA 90 bp CTGTCCATCCGCTGGATCCCCAGGATGCTGGGCTCAAGTGTCAGCTaGGTTTACCTCTTTGGAACAGAAGTAATGGACGACCACTCCATT +
Preference number: 1 (lower is better)
Translates to: LSIRWIPRMLGSSVS*VYLFGTEVMDDHSI
Trigger: AATGGAGTGGTCGTCCATTACTTCTGTTCCAAAGAGGTAAACCCAGCTGACACTTGAGCCCAGCATCCTGGGGATCCAGCGGATGGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564994.5
3UTR GCA 90 bp CATGGAGACGTAAAACACTACACAGAATGCGAGCCATCGGGTCCATaGGGCCAGAAGCTTGAGTGCTGTTCTCTCATGGAACTCTCCAGT +
Preference number: 1 (lower is better)
Translates to: HGDVKHYTECEPSGP*GQKLECCSLMELSS
Trigger: ACTGGAGAGTTCCATGAGAGAACAGCACTCAAGCTTCTGGCCGCATGGACCCGATGGCTCGCATTCTGTGTAGTGTTTTACGTCTCCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
3UTR CCA 90 bp AAGCCTAGTCTACTTACCATCAGCACGTTGATCTGTCACACAGCATaGAGCCATAGTTTACAAAGGACCACGGCAGGTCAAGGACAGGCC +
Preference number: 1 (lower is better)
Translates to: KPSLLTISTLICHTA*SHSLQRTTAGQGQA
Trigger: GGCCTGTCCTTGACCTGCCGTGGTCCTTTGTAAACTATGGCTCCATGCTGTGTGACAGATCAACGTGCTGATGGTAAGTAGACTAGGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318006.10
3UTR CCA 90 bp GATCCCCAGGATGCTGGGCTCAAGTGTCAGCTGGGTTTACCTCTTTaGAACAGAAGTAATGGACGACCACTCCATTGGGGTATCTTGCAA +
Preference number: 1 (lower is better)
Translates to: DPQDAGLKCQLGLPL*NRSNGRPLHWGILQ
Trigger: TTGCAAGATACCCCAATGGAGTGGTCGTCCATTACTTCTGTTCCAAAGAGGTAAACCCAGCTGACACTTGAGCCCAGCATCCTGGGGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564994.5
3UTR CCA 90 bp TTGCTTCAAAGACAGTTTGTGAGAATGGAAGATAACAAGCACAGCTaGCCAGGAAGGCAGGGCACACATGGCAGGTCAAGTTCCTGCTAT +
Preference number: 1 (lower is better)
Translates to: LLQRQFVRMEDNKHS*PGRQGTHGRSSSCY
Trigger: ATAGCAGGAACTTGACCTGCCATGTGTGCCCTGCCTTCCTGGCCAGCTGTGCTTGTTATCTTCCATTCTCACAAACTGTCTTTGAAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318006.10
3UTR TCA 90 bp GTTCTCTCATGGAACTCTCCAGTGAGCCATGCTGAGCGGTCCTTGTaGAGTCATGTACTTAATAGAAAAGCCCTTGATGAACAACCCCAT +
Preference number: 1 (lower is better)
Translates to: VLSWNSPVSHAERSL*SHVLNRKALDEQPH
Trigger: ATGGGGTTGTTCATCAAGGGCTTTTCTATTAAGTACATGACTTCACAAGGACCGCTCAGCATGGCTCACTGGAGAGTTCCATGAGAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318006.10
3UTR-3UTR TCA 90 bp CCCCGCGTCCCCTCTGCTGTGCCTAAACACCTCTCAGGAACACTTGGCAGCACGACACTCAGCCCGGCCTaGGGCAAGGGATGCAGGGCC +
Preference number: 2 (lower is better)
Translates to: PRVPSAVPKHLSGTLGSTTLSPA*GKGCRA
Trigger: GGCCCTGCATCCCTTGCCTCAGGCCGGGCTGAGTGT...CGTGCTGCCAAGTGTTCCTGAGAGGTGTTTAGGCACAGCAGAGGGGACGCGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318006.10
3UTR-3UTR GCA 90 bp ATGGGGCCAATGGCACTCACTGTCTCTTCAGGCCCCCACGGACGGCATGCCTGGTCATCCCCTGCGTGTTaGCGGGACCCACCTTCCTGC +
Preference number: 2 (lower is better)
Translates to: MGPMALTVSSGPHGRHAWSSPAC*RDPPSC
Trigger: GCAGGAAGGTGGGTCCCGGCAACACGCAGGGGATGA...CCAGGCATGCCGTCCGTGGGGGCCTGAAGAGACAGTGAGTGCCATTGGCCCCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000318006.10
3UTR-3UTR GCA 90 bp TGTCTCTTCAGGCCCCCACGGACGGCATGCCTGGGGAAGCCTAGTCTACTTACCGCGTCCTGCTGTTCTTaGCCCCCGCGTCCCCTCTGC +
Preference number: 2 (lower is better)
Translates to: CLFRPPRTACLGKPSLLTASCCS*PPRPLC
Trigger: GCAGAGGGGACGCGGGGGGCAAGAACAGCAGGACGC...GGTAAGTAGACTAGGCTTCCCCAGGCATGCCGTCCGTGGGGGCCTGAAGAGACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000318006.10
3UTR-3UTR TCA 90 bp ATGGGGCCAATGGCACTCACTGTCTCTTCAGGCCCCCACGGACGGCATGCCTGGTCAGCCTGCAGTGCCTaGAACTCCAGCCTGTGCACC +
Preference number: 2 (lower is better)
Translates to: MGPMALTVSSGPHGRHAWSACSA*NSSLCT
Trigger: GGTGCACAGGCTGGAGTTTCAGGCACTGCAGGCTGA...CCAGGCATGCCGTCCGTGGGGGCCTGAAGAGACAGTGAGTGCCATTGGCCCCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318006.10
3UTR-3UTR GCA 90 bp GGCCCCCACGGACGGCATGCCTGGGGAAGCCTAGTCTACTTACCATCAGCACGTGCACCTCTGGCAGGATaGCCCACACTGCTCCACAGG +
Preference number: 2 (lower is better)
Translates to: GPHGRHAWGSLVYLPSARAPLAG*PTLLHR
Trigger: CCTGTGGAGCAGTGTGGGGCATCCTGCCAGAGGTGC...ACGTGCTGATGGTAAGTAGACTAGGCTTCCCCAGGCATGCCGTCCGTGGGGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318006.10
3UTR-3UTR CCA 90 bp CCTCTCTGGGAGAGCCAAGCTGTCCATCCGCTGGATCCCCAGGATGCTGGGCTCAAGCTGTCCATCCGCTaGATCCCCAGGATGCTGGGC +
Preference number: 2 (lower is better)
Translates to: PLWESQAVHPLDPQDAGLKLSIR*IPRMLG
Trigger: GCCCAGCATCCTGGGGATCCAGCGGATGGACAGCTT...GAGCCCAGCATCCTGGGGATCCAGCGGATGGACAGCTTGGCTCTCCCAGAGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564994.5
3UTR-3UTR TCA 90 bp CTCACTGTCTCTTCAGGCCCCCACGGACGGCATGCCTGGGGAAGCCTAGTCTACTGCCTGAGTGTCTGGTaGGCGAAGACGGAGCAGGCA +
Preference number: 2 (lower is better)
Translates to: LTVSSGPHGRHAWGSLVYCLSVW*AKTEQA
Trigger: TGCCTGCTCCGTCTTCGCTCACCAGACACTCAGGCA...GTAGACTAGGCTTCCCCAGGCATGCCGTCCGTGGGGGCCTGAAGAGACAGTGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318006.10
3UTR-3UTR TCA 90 bp ATGGGGCCAATGGCACTCACTGTCTCTTCAGGCCCCCACGGACGGCATGCCTGGCTAAGCCAGCCTGCCTaGGTGTCTGGTGAGCGAAGA +
Preference number: 2 (lower is better)
Translates to: MGPMALTVSSGPHGRHAWLSQPA*VSGERR
Trigger: TCTTCGCTCACCAGACACTCAGGCAGGCTGGCTTAG...CCAGGCATGCCGTCCGTGGGGGCCTGAAGAGACAGTGAGTGCCATTGGCCCCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318006.10
3UTR-3UTR CCA 90 bp ATGGGGCCAATGGCACTCACTGTCTCTTCAGGCCCCCACGGACGGCATGCCTGGGGAGCCTTGTGGTGGTaGCAGCCAGGATTCCTAAGG +
Preference number: 2 (lower is better)
Translates to: MGPMALTVSSGPHGRHAWGALWW*QPGFLR
Trigger: CCTTAGGAATCCTGGCTGCCACCACCACAAGGCTCC...CCAGGCATGCCGTCCGTGGGGGCCTGAAGAGACAGTGAGTGCCATTGGCCCCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000318006.10
3UTR CAA 90 bp GGCAGCACGCCATTGTCAGTTCCAGGTCCACTCATCCCCTGCGTGTaGCCGGGACCCACCTTCCTGCGCTATCCCAGCACAACTCTCCAA +
Preference number: 2 (lower is better)
Translates to: GSTPLSVPGPLIPCV*PGPTFLRYPSTTLQ
Trigger: TTGGAGAGTTGTGCTGGGATAGCGCAGGAAGGTGGGTCCCGGCAACACGCAGGGGATGAGTGGACCTGGAACTGACAATGGCGTGCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
3UTR-3UTR TCA 90 bp CCTGGAGGAAGCAGAGTCCAAGCTGGCCCAGATGAGGCCCCGGGCAGCACTGCTTGCCTAGGCAGAGAATaGTGCTCTCCGAGGCATCTA +
Preference number: 2 (lower is better)
Translates to: PGGSRVQAGPDEAPGSTACLGRE*CSPRHL
Trigger: TAGATGCCTCGGAGAGCATCATTCTCTGCCTAGGCA...AGCAGTGCTGCCCGGGGCCTCATCTGGGCCAGCTTGGACTCTGCTTCCTCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
3UTR-3UTR TCA 90 bp CTGCAGTCACACTCAGCCCGGCCTGAGGCAAGGGATGCAGGGCCTTGCCTAGGCGTTTCCTTGTTCAGGTaGCTGGTGTGCAAAGGCAAG +
Preference number: 2 (lower is better)
Translates to: LQSHSARPEARDAGPCLGVSLFR*LVCKGK
Trigger: CTTGCCTTTGCACACCAGTCACCTGAACAAGGAAAC...GCCTAGGCAAGGCCCTGCATCCCTTGCCTCAGGCCGGGCTGAGTGTGACTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318006.10
3UTR-3UTR TCA 90 bp TGTCTCTTCAGGCCCCCACGGACGGCATGCCTGGGGAAGCCTAGTCTACTTACCCATGGAACTCTCCAGTaGGCCATGCTGAGCGGTCCT +
Preference number: 2 (lower is better)
Translates to: CLFRPPRTACLGKPSLLTHGTLQ*AMLSGP
Trigger: AGGACCGCTCAGCATGGCTCACTGGAGAGTTCCATG...GGTAAGTAGACTAGGCTTCCCCAGGCATGCCGTCCGTGGGGGCCTGAAGAGACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318006.10
3UTR-3UTR GCA 90 bp GGCCCCCACGGACGGCATGCCTGGGGAAGCCTAGTCTACTTACCATCAGCACGTGCGTCCCCTCTGCTGTaGCTAAACACCTCTCAGGAA +
Preference number: 2 (lower is better)
Translates to: GPHGRHAWGSLVYLPSARASPLL*LNTSQE
Trigger: TTCCTGAGAGGTGTTTAGGCACAGCAGAGGGGACGC...ACGTGCTGATGGTAAGTAGACTAGGCTTCCCCAGGCATGCCGTCCGTGGGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000318006.10
3UTR CAA 90 bp TCTGCTGTGCCTAAACACCTCTCAGGAACACTTGGCAGCACGCCATaGTCAGTTCCAGGTCCACTCATCCCCTGCGTGTTGCCGGGACCC +
Preference number: 2 (lower is better)
Translates to: SAVPKHLSGTLGSTP*SVPGPLIPCVLPGP
Trigger: GGGTCCCGGCAACACGCAGGGGATGAGTGGACCTGGAACTGACAATGGCGTGCTGCCAAGTGTTCCTGAGAGGTGTTTAGGCACAGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
3UTR-3UTR CCA 90 bp GCTCCTTCACCTCTCTGGGAGAGCCAAGCTGTCCATCCGCTGGATCCCCAGGATAAATGGGGAGCCTTGTaGTGGTGGCAGCCAGGATTC +
Preference number: 2 (lower is better)
Translates to: APSPLWESQAVHPLDPQDKWGAL*WWQPGF
Trigger: GAATCCTGGCTGCCACCACCACAAGGCTCCCCATTT...ATCCTGGGGATCCAGCGGATGGACAGCTTGGCTCTCCCAGAGAGGTGAAGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318006.10
ENST00000564994.5
3UTR-3UTR CCA 90 bp CAGGAACACTTGGCAGCACGCCATTGTCAGTTCCAGGTCCACTCATCCCCTGCGGCTCCTTCACCTCTCTaGGAGAGCCAAGCTGTCCAT +
Preference number: 2 (lower is better)
Translates to: QEHLAARHCQFQVHSSPAAPSPL*ESQAVH
Trigger: ATGGACAGCTTGGCTCTCCCAGAGAGGTGAAGGAGC...CGCAGGGGATGAGTGGACCTGGAACTGACAATGGCGTGCTGCCAAGTGTTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
3UTR-3UTR GCA 90 bp TGTCTCTTCAGGCCCCCACGGACGGCATGCCTGGGGAAGCCTAGTCTACTTACCAAACACTACACAGAATaGGAGCCATCGGGTCCATGC +
Preference number: 2 (lower is better)
Translates to: CLFRPPRTACLGKPSLLTKHYTE*EPSGPC
Trigger: GCATGGACCCGATGGCTCGCATTCTGTGTAGTGTTT...GGTAAGTAGACTAGGCTTCCCCAGGCATGCCGTCCGTGGGGGCCTGAAGAGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318006.10
3UTR-3UTR GCA 90 bp ATGGGGCCAATGGCACTCACTGTCTCTTCAGGCCCCCACGGACGGCATGCCTGGAGAACTGAGACCCCTTaGTTCTCATCTTACCTTGCT +
Preference number: 2 (lower is better)
Translates to: MGPMALTVSSGPHGRHAWRTETP*FSSYLA
Trigger: AGCAAGGTAAGATGAGAAGCAAGGGGTCTCAGTTCT...CCAGGCATGCCGTCCGTGGGGGCCTGAAGAGACAGTGAGTGCCATTGGCCCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000318006.10
3UTR-3UTR CCA 90 bp TCCGCTGGATCCCCAGGATGCTGGGCTCAAGTGTCAGCTGGGTTTACCTCTTTGAAATGGGGAGCCTTGTaGTGGTGGCAGCCAGGATTC +
Preference number: 2 (lower is better)
Translates to: SAGSPGCWAQVSAGFTSLKWGAL*WWQPGF
Trigger: GAATCCTGGCTGCCACCACCACAAGGCTCCCCATTT...CAAAGAGGTAAACCCAGCTGACACTTGAGCCCAGCATCCTGGGGATCCAGCGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564994.5
3UTR-3UTR CCA 90 bp CCTTCACCTCTCTGGGAGAGCCAAGCTGTCCATCCGCTGGATCCCCAGGATGCTGGACGACCACTCCATTaGGGTATCTTGCAAATGCAC +
Preference number: 2 (lower is better)
Translates to: PSPLWESQAVHPLDPQDAGRPLH*GILQMH
Trigger: GTGCATTTGCAAGATACCCCAATGGAGTGGTCGTCC...AGCATCCTGGGGATCCAGCGGATGGACAGCTTGGCTCTCCCAGAGAGGTGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564994.5
3UTR-3UTR TCA 90 bp TCTGCGAATGGGGCCAATGGCACTCACTGTCTCTTCAGGCCCCCACGGACGGCAGAAAGAAAAGGAGACTaGAAACTAACAGGGCGGCTA +
Preference number: 2 (lower is better)
Translates to: SANGANGTHCLFRPPRTAERKGD*KLTGRL
Trigger: TAGCCGCCCTGTTAGTTTTCAGTCTCCTTTTCTTTC...TGCCGTCCGTGGGGGCCTGAAGAGACAGTGAGTGCCATTGGCCCCATTCGCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000318006.10
3UTR-3UTR CCA 90 bp GCCATTGTCAGTTCCAGGTCCACTCATCCCCTGCGTGTTGCCGGGACCCACCTTAGTGCTGTTCTCTCATaGAACTCTCCAGTGAGCCAT +
Preference number: 2 (lower is better)
Translates to: AIVSSRSTHPLRVAGTHLSAVLS*NSPVSH
Trigger: ATGGCTCACTGGAGAGTTCCATGAGAGAACAGCACT...AAGGTGGGTCCCGGCAACACGCAGGGGATGAGTGGACCTGGAACTGACAATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
3UTR CAA 90 bp AACACTACACAGAATGCGAGCCATCGGGTCCATGCGGCCAGAAGCTaGAGTGCTGTTCTCTCATGGAACTCTCCAGTGAGCCATGCTGAG +
Preference number: 2 (lower is better)
Translates to: NTTQNASHRVHAARS*SAVLSWNSPVSHAE
Trigger: CTCAGCATGGCTCACTGGAGAGTTCCATGAGAGAACAGCACTCAAGCTTCTGGCCGCATGGACCCGATGGCTCGCATTCTGTGTAGTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318006.10
3UTR-3UTR TCA 90 bp CCCCGCGTCCCCTCTGCTGTGCCTAAACACCTCTCAGGAACACTTGGCAGCACGGGTTACAAACACTTGTaGCAAGTTTCCTTGTTCAGG +
Preference number: 2 (lower is better)
Translates to: PRVPSAVPKHLSGTLGSTGYKHL*QVSLFR
Trigger: CCTGAACAAGGAAACTTGTCACAAGTGTTTGTAACC...CGTGCTGCCAAGTGTTCCTGAGAGGTGTTTAGGCACAGCAGAGGGGACGCGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318006.10
3UTR-3UTR CCA 90 bp GTGTGCAAAGGCAAGATGGTGCACATCCTCCTGACCAAGCAGGTACTGAATTCTAAGCTGTCCATCCGCTaGATCCCCAGGATGCTGGGC +
Preference number: 2 (lower is better)
Translates to: VCKGKMVHILLTKQVLNSKLSIR*IPRMLG
Trigger: GCCCAGCATCCTGGGGATCCAGCGGATGGACAGCTT...AGAATTCAGTACCTGCTTGGTCAGGAGGATGTGCACCATCTTGCCTTTGCACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318006.10
ENST00000564994.5
3UTR CAA 90 bp CGGACGGCATGCCTGGGGAAGCCTAGTCTACTTACCATCAGCACGTaGATCTGTCACACAGCATGGAGCCATAGTTTACAAAGGACCACG +
Preference number: 2 (lower is better)
Translates to: RTACLGKPSLLTIST*ICHTAWSHSLQRTT
Trigger: CGTGGTCCTTTGTAAACTATGGCTCCATGCTGTGTGACAGATCAACGTGCTGATGGTAAGTAGACTAGGCTTCCCCAGGCATGCCGTCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
3UTR-3UTR TCA 90 bp TCCCAGAGTCAGGGAAGTGGGAGAGAAAGCCTGGGTAGGGCAGTGAGGGAAGTGGCTGAGCGGTCCTTGTaGAGTCATGTACTTAATAGA +
Preference number: 2 (lower is better)
Translates to: SQSQGSGRESLGRAVREVAERSL*SHVLNR
Trigger: TCTATTAAGTACATGACTTCACAAGGACCGCTCAGC...CACTTCCCTCACTGCCCTACCCAGGCTTTCTCTCCCACTTCCCTGACTCTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318006.10
3UTR-3UTR TCA 90 bp GGAGCTTGGGAGCATGGGATCATGTATGTATACCAGGAAAGAAAACACACATTCTCCTCCGAACTCTGGTaGAGGGCTGCCCAGCCTCAC +
Preference number: 2 (lower is better)
Translates to: GAWEHGIMYVYQERKHTFSSELW*RAAQPH
Trigger: GTGAGGCTGGGCAGCCCTTCACCAGAGTTCGGAGGA...GAATGTGTGTTTTCTTTCCTGGTATACATACATGATCCCATGCTCCCAAGCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
3UTR-3UTR GCA 90 bp GGAGCTTGGGAGCATGGGATCATGTATGTATACCAGGAAAGAAAACACACATTCCCCCCACGGACGGCATaGCTGGGGAAGCCTAGTCTA +
Preference number: 2 (lower is better)
Translates to: GAWEHGIMYVYQERKHTFPPRTA*LGKPSL
Trigger: TAGACTAGGCTTCCCCAGGCATGCCGTCCGTGGGGG...GAATGTGTGTTTTCTTTCCTGGTATACATACATGATCCCATGCTCCCAAGCTCC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000318006.10
3UTR-3UTR GCA 90 bp CACAGGTTTGGCGGTGAGTTATTTTTAAACCAGCGTCCTGCTGTTCTTGCCCCCGGCCAGAAGCTTGAGTaGTGTTCTCTCATGGAACTC +
Preference number: 2 (lower is better)
Translates to: HRFGGELFLNQRPAVLAPGQKLE*CSLMEL
Trigger: GAGTTCCATGAGAGAACAGCACTCAAGCTTCTGGCC...GGGGGCAAGAACAGCAGGACGCTGGTTTAAAAATAACTCACCGCCAAACCTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000318006.10
3UTR-3UTR GCA 90 bp GGAGCTTGGGAGCATGGGATCATGTATGTATACCAGGAAAGAAAACACACATTCGAGCCATCGGGTCCATaGGGCCAGAAGCTTGAGTGC +
Preference number: 2 (lower is better)
Translates to: GAWEHGIMYVYQERKHTFEPSGP*GQKLEC
Trigger: GCACTCAAGCTTCTGGCCGCATGGACCCGATGGCTC...GAATGTGTGTTTTCTTTCCTGGTATACATACATGATCCCATGCTCCCAAGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
3UTR-3UTR CCA 90 bp GTGTGCAAAGGCAAGATGGTGCACATCCTCCTGACCAAGCAGGTACTGAATTCTCCAGTAATGTCCAAATaGGGAGCCTTGTGGTGGTGG +
Preference number: 2 (lower is better)
Translates to: VCKGKMVHILLTKQVLNSPVMSK*GALWWW
Trigger: CCACCACCACAAGGCTCCCCATTTGGACATTACTGG...AGAATTCAGTACCTGCTTGGTCAGGAGGATGTGCACCATCTTGCCTTTGCACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318006.10
ENST00000564994.5
3UTR-3UTR CCA 90 bp TGCCGGGACCCACCTTCCTGCGCTATCCCAGCACAACTCTCCAACCACACCATTTGTAAGGCAAGTGAATaGAAACTGGCTGGAAAAAGA +
Preference number: 2 (lower is better)
Translates to: CRDPPSCAIPAQLSNHTICKASE*KLAGKR
Trigger: TCTTTTTCCAGCCAGTTTCCATTCACTTGCCTTACA...AATGGTGTGGTTGGAGAGTTGTGCTGGGATAGCGCAGGAAGGTGGGTCCCGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318006.10
3UTR-3UTR CCA 90 bp AAGTGTCAGCTGGGTTTACCTCTTTGGAACAGAAGTAATGGACGACCACTCCATGCTCCTTCACCTCTCTaGGAGAGCCAAGCTGTCCAT +
Preference number: 2 (lower is better)
Translates to: KCQLGLPLWNRSNGRPLHAPSPL*ESQAVH
Trigger: ATGGACAGCTTGGCTCTCCCAGAGAGGTGAAGGAGC...ATGGAGTGGTCGTCCATTACTTCTGTTCCAAAGAGGTAAACCCAGCTGACACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564994.5
3UTR-3UTR CCA 90 bp CAGGATGCTGGGCTCAAGTGTCAGCTGGGTTTACCTCTTTGGAACAGAAGTAATCCAGTAATGTCCAAATaGGGAGCCTTGTGGTGGTGG +
Preference number: 2 (lower is better)
Translates to: QDAGLKCQLGLPLWNRSNPVMSK*GALWWW
Trigger: CCACCACCACAAGGCTCCCCATTTGGACATTACTGG...ATTACTTCTGTTCCAAAGAGGTAAACCCAGCTGACACTTGAGCCCAGCATCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564994.5
3UTR-3UTR CCA 90 bp GTTGAGGGAAGGAAGAATGGAGCTTGGGAGCATGGGATCATGTATGTATACCAGCCTCTCAGGAACACTTaGCAGCACGCCATTGTCAGT +
Preference number: 2 (lower is better)
Translates to: VEGRKNGAWEHGIMYVYQPLRNT*QHAIVS
Trigger: ACTGACAATGGCGTGCTGCCAAGTGTTCCTGAGAGG...CTGGTATACATACATGATCCCATGCTCCCAAGCTCCATTCTTCCTTCCCTCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318006.10
3UTR-3UTR CCA 90 bp GTTGAGGGAAGGAAGAATGGAGCTTGGGAGCATGGGATCATGTATGTATACCAGGAGCAGGCACCTCTGTaGGAACATGTATCTAGGGAT +
Preference number: 2 (lower is better)
Translates to: VEGRKNGAWEHGIMYVYQEQAPL*EHVSRD
Trigger: ATCCCTAGATACATGTTCCCACAGAGGTGCCTGCTC...CTGGTATACATACATGATCCCATGCTCCCAAGCTCCATTCTTCCTTCCCTCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318006.10
3UTR-3UTR CCA 90 bp GGAGCTTGGGAGCATGGGATCATGTATGTATACCAGGAAAGAAAACACACATTCTTCCCATTAAAAAGCTaGCAATGCCAGACCATGAGT +
Preference number: 2 (lower is better)
Translates to: GAWEHGIMYVYQERKHTFFPLKS*QCQTMS
Trigger: ACTCATGGTCTGGCATTGCCAGCTTTTTAATGGGAA...GAATGTGTGTTTTCTTTCCTGGTATACATACATGATCCCATGCTCCCAAGCTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318006.10
3UTR-3UTR GCA 90 bp AAAAGCTGGCAATGCCAGACCATGAGTCTAATTAATTCAGAGTTGTTCCAGGGCTCCATTGGGGTATCTTaGAAATGCACATACATTGCA +
Preference number: 2 (lower is better)
Translates to: KSWQCQTMSLINSELFQGSIGVS*KCTYIA
Trigger: TGCAATGTATGTGCATTTGCAAGATACCCCAATGGA...GCCCTGGAACAACTCTGAATTAATTAGACTCATGGTCTGGCATTGCCAGCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564994.5
3UTR CCA 72 bp GATGAGGCCCCGGGCAGCACTGCTTCTGTGTGGGTATaGCCAGTCGGGACGTGGCGCCACACACTGCTCCTC +
Preference number: 3 (lower is better)
Translates to: DEAPGSTASVWV*PVGTWRHTLLL
Trigger: GAGGAGCAGTGTGTGGCGCCACGTCCCGACTGGCCATACCCACACAGAAGCAGTGCTGCCCGGGGCCTCATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
3UTR GCA 72 bp GCATACCCCAGACAGGGCAGGCCCATCCTCAGGAGCTaGAGTCACACTCAGCCCGGCCTGAGGCAAGGGATG +
Preference number: 3 (lower is better)
Translates to: AYPRQGRPILRS*SHTQPGLRQGM
Trigger: CATCCCTTGCCTCAGGCCGGGCTGAGTGTGACTGCAGCTCCTGAGGATGGGCCTGCCCTGTCTGGGGTATGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
3UTR TCA 72 bp TGCTCCTGGAGGAAGCAGAGTCCAAGCTGGCCCAGATaGGGCCCCGGGCAGCACTGCTTCTGTGTGGGTATG +
Preference number: 3 (lower is better)
Translates to: CSWRKQSPSWPR*GPGQHCFCVGM
Trigger: CATACCCACACAGAAGCAGTGCTGCCCGGGGCCTCATCTGGGCCAGCTTGGACTCTGCTTCCTCCAGGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
3UTR GCA 72 bp AGCACGCCATTGTCAGTTCCAGGTCCACTCATCCCCTaGGTGTTGCCGGGACCCACCTTCCTGCGCTATCCC +
Preference number: 3 (lower is better)
Translates to: STPLSVPGPLIP*VLPGPTFLRYP
Trigger: GGGATAGCGCAGGAAGGTGGGTCCCGGCAACACGCAGGGGATGAGTGGACCTGGAACTGACAATGGCGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
3UTR CCA 72 bp CTGAGCAGAGTCTCCCACATCTGCGAATGGGGCCAATaGCACTCACTGTCTCTTCAGGCCCCCACGGACGGC +
Preference number: 3 (lower is better)
Translates to: LSRVSHICEWGQ*HSLSLQAPTDG
Trigger: GCCGTCCGTGGGGGCCTGAAGAGACAGTGAGTGCCATTGGCCCCATTCGCAGATGTGGGAGACTCTGCTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318006.10
3UTR-3UTR CAA 90 bp TCTGCGAATGGGGCCAATGGCACTCACTGTCTCTTCAGGCCCCCACGGACGGCACTTGGCAGCACGCCATaGTCAGTTCCAGGTCCACTC +
Preference number: 3 (lower is better)
Translates to: SANGANGTHCLFRPPRTALGSTP*SVPGPL
Trigger: GAGTGGACCTGGAACTGACAATGGCGTGCTGCCAAG...TGCCGTCCGTGGGGGCCTGAAGAGACAGTGAGTGCCATTGGCCCCATTCGCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318006.10
3UTR GCA 72 bp GGCACTCACTGTCTCTTCAGGCCCCCACGGACGGCATaGCTGGGGAAGCCTAGTCTACTTACCATCAGCACG +
Preference number: 3 (lower is better)
Translates to: GTHCLFRPPRTA*LGKPSLLTIST
Trigger: CGTGCTGATGGTAAGTAGACTAGGCTTCCCCAGGCATGCCGTCCGTGGGGGCCTGAAGAGACAGTGAGTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318006.10
3UTR CCA 72 bp CCAGGATTCCTAAGGCCAGGTGCTCCTTCACCTCTCTaGGAGAGCCAAGCTGTCCATCCGCTGGATCCCCAG +
Preference number: 3 (lower is better)
Translates to: PGFLRPGAPSPL*ESQAVHPLDPQ
Trigger: CTGGGGATCCAGCGGATGGACAGCTTGGCTCTCCCAGAGAGGTGAAGGAGCACCTGGCCTTAGGAATCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318006.10
ENST00000564994.5
3UTR CCA 72 bp CTCACAGGCCTGAGCAGAGTCTCCCACATCTGCGAATaGGGCCAATGGCACTCACTGTCTCTTCAGGCCCCC +
Preference number: 3 (lower is better)
Translates to: LTGLSRVSHICE*GQWHSLSLQAP
Trigger: GGGGGCCTGAAGAGACAGTGAGTGCCATTGGCCCCATTCGCAGATGTGGGAGACTCTGCTCAGGCCTGTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318006.10
3UTR CCA 72 bp AGCACTGCTTCTGTGTGGGTATGGCCAGTCGGGACGTaGCGCCACACACTGCTCCTCCGAACTCTGGTGAAG +
Preference number: 3 (lower is better)
Translates to: STASVWVWPVGT*RHTLLLRTLVK
Trigger: CTTCACCAGAGTTCGGAGGAGCAGTGTGTGGCGCCACGTCCCGACTGGCCATACCCACACAGAAGCAGTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318006.10
3UTR CCA 72 bp CTTCACCTCTCTGGGAGAGCCAAGCTGTCCATCCGCTaGATCCCCAGGATGCTGGGCTCAAGTGTCAGCTGG +
Preference number: 3 (lower is better)
Translates to: LHLSGRAKLSIR*IPRMLGSSVSW
Trigger: CCAGCTGACACTTGAGCCCAGCATCCTGGGGATCCAGCGGATGGACAGCTTGGCTCTCCCAGAGAGGTGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564994.5
3UTR-3UTR CAA 90 bp TCTGCGAATGGGGCCAATGGCACTCACTGTCTCTTCAGGCCCCCACGGACGGCACATGCGGCCAGAAGCTaGAGTGCTGTTCTCTCATGG +
Preference number: 3 (lower is better)
Translates to: SANGANGTHCLFRPPRTAHAARS*SAVLSW
Trigger: CCATGAGAGAACAGCACTCAAGCTTCTGGCCGCATG...TGCCGTCCGTGGGGGCCTGAAGAGACAGTGAGTGCCATTGGCCCCATTCGCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318006.10
3UTR-3UTR CAA 90 bp CCCACATCTGCGAATGGGGCCAATGGCACTCACTGTCTCTTCAGGCCCCCACGGAAGGGATGCAGGGCCTaGCCTAGGCAGAGAATGATG +
Preference number: 3 (lower is better)
Translates to: PTSANGANGTHCLFRPPRKGCRA*PRQRMM
Trigger: CATCATTCTCTGCCTAGGCAAGGCCCTGCATCCCTT...CCGTGGGGGCCTGAAGAGACAGTGAGTGCCATTGGCCCCATTCGCAGATGTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318006.10
3UTR-3UTR CAA 90 bp TCTGCGAATGGGGCCAATGGCACTCACTGTCTCTTCAGGCCCCCACGGACGGCAAGGCCACTAAAACTGTaGGTGCTGGGCACCATCACC +
Preference number: 3 (lower is better)
Translates to: SANGANGTHCLFRPPRTARPLKL*VLGTIT
Trigger: GGTGATGGTGCCCAGCACCAACAGTTTTAGTGGCCT...TGCCGTCCGTGGGGGCCTGAAGAGACAGTGAGTGCCATTGGCCCCATTCGCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000318006.10
3UTR GCA 72 bp CACTCATCCCCTGCGTGTTGCCGGGACCCACCTTCCTaGGCTATCCCAGCACAACTCTCCAACCACACCATT +
Preference number: 3 (lower is better)
Translates to: HSSPACCRDPPS*AIPAQLSNHTI
Trigger: AATGGTGTGGTTGGAGAGTTGTGCTGGGATAGCGCAGGAAGGTGGGTCCCGGCAACACGCAGGGGATGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
3UTR GCA 72 bp CATTGTCAGTTCCAGGTCCACTCATCCCCTGCGTGTTaGCGGGACCCACCTTCCTGCGCTATCCCAGCACAA +
Preference number: 3 (lower is better)
Translates to: HCQFQVHSSPAC*RDPPSCAIPAQ
Trigger: TTGTGCTGGGATAGCGCAGGAAGGTGGGTCCCGGCAACACGCAGGGGATGAGTGGACCTGGAACTGACAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
3UTR GCA 72 bp GTGCCTGAAACTCCAGCCTGTGCACCTCTGGCAGGATaGCCCACACTGCTCCACAGGTTTGGCGGTGAGTTA +
Preference number: 3 (lower is better)
Translates to: VPETPACAPLAG*PTLLHRFGGEL
Trigger: TAACTCACCGCCAAACCTGTGGAGCAGTGTGGGGCATCCTGCCAGAGGTGCACAGGCTGGAGTTTCAGGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318006.10
3UTR GCA 72 bp CCCAGCCTCACAGGCCTGAGCAGAGTCTCCCACATCTaGGAATGGGGCCAATGGCACTCACTGTCTCTTCAG +
Preference number: 3 (lower is better)
Translates to: PSLTGLSRVSHI*EWGQWHSLSLQ
Trigger: CTGAAGAGACAGTGAGTGCCATTGGCCCCATTCGCAGATGTGGGAGACTCTGCTCAGGCCTGTGAGGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
3UTR TCA 72 bp CAAAATCGCCACGCACAAAGACTAAGCCAGCCTGCCTaGGTGTCTGGTGAGCGAAGACGGAGCAGGCACCTC +
Preference number: 3 (lower is better)
Translates to: QNRHAQRLSQPA*VSGERRRSRHL
Trigger: GAGGTGCCTGCTCCGTCTTCGCTCACCAGACACTCAGGCAGGCTGGCTTAGTCTTTGTGCGTGGCGATTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
3UTR GCA 72 bp GGAGAGCCAAGCTGTCCATCCGCTGGATCCCCAGGATaGTGGGCTCAAGTGTCAGCTGGGTTTACCTCTTTG +
Preference number: 3 (lower is better)
Translates to: GEPSCPSAGSPG*WAQVSAGFTSL
Trigger: CAAAGAGGTAAACCCAGCTGACACTTGAGCCCAGCATCCTGGGGATCCAGCGGATGGACAGCTTGGCTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564994.5
3UTR-3UTR CAA 90 bp GAGCCAAGCTGTCCATCCGCTGGATCCCCAGGATGCTGGGCTCAAGTGTCAGCTTGGACGACCACTCCATaGGGGTATCTTGCAAATGCA +
Preference number: 3 (lower is better)
Translates to: EPSCPSAGSPGCWAQVSAWTTTP*GYLANA
Trigger: TGCATTTGCAAGATACCCCAATGGAGTGGTCGTCCA...AGCTGACACTTGAGCCCAGCATCCTGGGGATCCAGCGGATGGACAGCTTGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564994.5
3UTR TCA 72 bp GAGGCAAGGGATGCAGGGCCTTGCCTAGGCAGAGAATaGTGCTCTCCGAGGCATCTAGGCATGGAGTGTATG +
Preference number: 3 (lower is better)
Translates to: EARDAGPCLGRE*CSPRHLGMECM
Trigger: CATACACTCCATGCCTAGATGCCTCGGAGAGCATCATTCTCTGCCTAGGCAAGGCCCTGCATCCCTTGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318006.10
3UTR CCA 72 bp GAGCCAAGCTGTCCATCCGCTGGATCCCCAGGATGCTaGGCTCAAGTGTCAGCTGGGTTTACCTCTTTGGAA +
Preference number: 3 (lower is better)
Translates to: EPSCPSAGSPGC*AQVSAGFTSLE
Trigger: TTCCAAAGAGGTAAACCCAGCTGACACTTGAGCCCAGCATCCTGGGGATCCAGCGGATGGACAGCTTGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564994.5
3UTR TCA 72 bp GGCAGGATGCCCCACACTGCTCCACAGGTTTGGCGGTaGGTTATTTTTAAACCAGCGTCCTGCTGTTCTTGC +
Preference number: 3 (lower is better)
Translates to: GRMPHTAPQVWR*VIFKPASCCSC
Trigger: GCAAGAACAGCAGGACGCTGGTTTAAAAATAACTCACCGCCAAACCTGTGGAGCAGTGTGGGGCATCCTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318006.10
3UTR-3UTR CAA 90 bp GGAGCTTGGGAGCATGGGATCATGTATGTATACCAGGAAAGAAAACACACATTCCTCATCCCCTGCGTGTaGCCGGGACCCACCTTCCTG +
Preference number: 3 (lower is better)
Translates to: GAWEHGIMYVYQERKHTFLIPCV*PGPTFL
Trigger: CAGGAAGGTGGGTCCCGGCAACACGCAGGGGATGAG...GAATGTGTGTTTTCTTTCCTGGTATACATACATGATCCCATGCTCCCAAGCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318006.10
3UTR-3UTR CAA 90 bp CACAGGTTTGGCGGTGAGTTATTTTTAAACCAGCGTCCTGCTGTTCTTGCCCCCTCTCCAACCACACCATaGCTGAACAAAGCTGGGGAG +
Preference number: 3 (lower is better)
Translates to: HRFGGELFLNQRPAVLAPSPTTP*LNKAGE
Trigger: CTCCCCAGCTTTGTTCAGCAATGGTGTGGTTGGAGA...GGGGGCAAGAACAGCAGGACGCTGGTTTAAAAATAACTCACCGCCAAACCTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000318006.10
3UTR GCA 72 bp GTAAAACACTACACAGAATGCGAGCCATCGGGTCCATaGGGCCAGAAGCTTGAGTGCTGTTCTCTCATGGAA +
Preference number: 3 (lower is better)
Translates to: VKHYTECEPSGP*GQKLECCSLME
Trigger: TTCCATGAGAGAACAGCACTCAAGCTTCTGGCCGCATGGACCCGATGGCTCGCATTCTGTGTAGTGTTTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
3UTR CCA 72 bp GATGCTGGGCTCAAGTGTCAGCTGGGTTTACCTCTTTaGAACAGAAGTAATGGACGACCACTCCATTGGGGT +
Preference number: 3 (lower is better)
Translates to: DAGLKCQLGLPL*NRSNGRPLHWG
Trigger: ACCCCAATGGAGTGGTCGTCCATTACTTCTGTTCCAAAGAGGTAAACCCAGCTGACACTTGAGCCCAGCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564994.5
3UTR TCA 72 bp GCCTGGGGAAGCCTAGTCTACTTACCATCAGCACGTTaGTCTGTCACACAGCATGGAGCCATAGTTTACAAA +
Preference number: 3 (lower is better)
Translates to: AWGSLVYLPSAR*SVTQHGAIVYK
Trigger: TTTGTAAACTATGGCTCCATGCTGTGTGACAGATCAACGTGCTGATGGTAAGTAGACTAGGCTTCCCCAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
3UTR CCA 72 bp CTACTTACCATCAGCACGTTGATCTGTCACACAGCATaGAGCCATAGTTTACAAAGGACCACGGCAGGTCAA +
Preference number: 3 (lower is better)
Translates to: LLTISTLICHTA*SHSLQRTTAGQ
Trigger: TTGACCTGCCGTGGTCCTTTGTAAACTATGGCTCCATGCTGTGTGACAGATCAACGTGCTGATGGTAAGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318006.10
3UTR TCA 72 bp TGGAACTCTCCAGTGAGCCATGCTGAGCGGTCCTTGTaGAGTCATGTACTTAATAGAAAAGCCCTTGATGAA +
Preference number: 3 (lower is better)
Translates to: WNSPVSHAERSL*SHVLNRKALDE
Trigger: TTCATCAAGGGCTTTTCTATTAAGTACATGACTTCACAAGGACCGCTCAGCATGGCTCACTGGAGAGTTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
3UTR CCA 72 bp CCTCTTTGGAACAGAAGTAATGGACGACCACTCCATTaGGGTATCTTGCAAATGCACATACATTGCAGGTCT +
Preference number: 3 (lower is better)
Translates to: PLWNRSNGRPLH*GILQMHIHCRS
Trigger: AGACCTGCAATGTATGTGCATTTGCAAGATACCCCAATGGAGTGGTCGTCCATTACTTCTGTTCCAAAGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564994.5
3UTR TCA 72 bp AGTGTATGGCCAAAGAGGGTCTATTTACAACATACCTaGCAATCAACTAGCACTGTATTCCTAGAACTGAGA +
Preference number: 3 (lower is better)
Translates to: SVWPKRVYLQHT*QSTSTVFLELR
Trigger: TCTCAGTTCTAGGAATACAGTGCTAGTTGATTGTCAGGTATGTTGTAAATAGACCCTCTTTGGCCATACACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR CCA 90 bp CCTGGAGGAAGCAGAGTCCAAGCTGGCCCAGATGAGGCCCCGGGCAGCACTGCTTGTTCCGGGCCGGGCTaGGGTCCGGAACGAGTCTGG +
Preference number: 4 (lower is better)
Translates to: PGGSRVQAGPDEAPGSTACSGPG*GPERVW
Trigger: CCAGACTCGTTCCGGACCCCAGCCCGGCCCGGAACA...AGCAGTGCTGCCCGGGGCCTCATCTGGGCCAGCTTGGACTCTGCTTCCTCCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR GCA 90 bp CGGGCAGCACTGCTTCTGTGTGGGTATGGCCAGTCGGGACGTGGCGCCACACACGGTCCACTCATCCCCTaGGTGTTGCCGGGACCCACC +
Preference number: 4 (lower is better)
Translates to: RAALLLCGYGQSGRGATHGPLIP*VLPGPT
Trigger: GGTGGGTCCCGGCAACACGCAGGGGATGAGTGGACC...GTGTGTGGCGCCACGTCCCGACTGGCCATACCCACACAGAAGCAGTGCTGCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR CCA 90 bp CTGCAGTCACACTCAGCCCGGCCTGAGGCAAGGGATGCAGGGCCTTGCCTAGGCTGGCCAGTCGGGACGTaGCGCCACACACTGCTCCTC +
Preference number: 4 (lower is better)
Translates to: LQSHSARPEARDAGPCLGWPVGT*RHTLLL
Trigger: GAGGAGCAGTGTGTGGCGCCACGTCCCGACTGGCCA...GCCTAGGCAAGGCCCTGCATCCCTTGCCTCAGGCCGGGCTGAGTGTGACTGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR TCA 90 bp CCCACATCTGCGAATGGGGCCAATGGCACTCACTGTCTCTTCAGGCCCCCACGGACACTCAGCCCGGCCTaGGGCAAGGGATGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: PTSANGANGTHCLFRPPRTLSPA*GKGCRA
Trigger: GGCCCTGCATCCCTTGCCTCAGGCCGGGCTGAGTGT...CCGTGGGGGCCTGAAGAGACAGTGAGTGCCATTGGCCCCATTCGCAGATGTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR GCA 90 bp CTGCAGTCACACTCAGCCCGGCCTGAGGCAAGGGATGCAGGGCCTTGCCTAGGCGGCTCGAAAGCGTCGTaGATGGCGGCAAGGGGAGAG +
Preference number: 4 (lower is better)
Translates to: LQSHSARPEARDAGPCLGGSKAS*MAARGE
Trigger: CTCTCCCCTTGCCGCCATGCACGACGCTTTCGAGCC...GCCTAGGCAAGGCCCTGCATCCCTTGCCTCAGGCCGGGCTGAGTGTGACTGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR GCA 90 bp GGCCCCCACGGACGGCATGCCTGGGGAAGCCTAGTCTACTTACCATCAGCACGTGGCCCCGGGCAGCACTaGTTCTGTGTGGGTATGGCC +
Preference number: 4 (lower is better)
Translates to: GPHGRHAWGSLVYLPSARGPGQH*FCVGMA
Trigger: GGCCATACCCACACAGAAGCAGTGCTGCCCGGGGCC...ACGTGCTGATGGTAAGTAGACTAGGCTTCCCCAGGCATGCCGTCCGTGGGGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR CCA 90 bp CGGGCAGCACTGCTTCTGTGTGGGTATGGCCAGTCGGGACGTGGCGCCACACACGGATCCCCAGGATGCTaGGCTCAAGTGTCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: RAALLLCGYGQSGRGATHGSPGC*AQVSAG
Trigger: CCCAGCTGACACTTGAGCCCAGCATCCTGGGGATCC...GTGTGTGGCGCCACGTCCCGACTGGCCATACCCACACAGAAGCAGTGCTGCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR GCA 90 bp CTGCAGTCACACTCAGCCCGGCCTGAGGCAAGGGATGCAGGGCCTTGCCTAGGCTGGTCCACGAGCACCTaGAGAGCTTTCTCGTGGAGC +
Preference number: 4 (lower is better)
Translates to: LQSHSARPEARDAGPCLGWSTST*RAFSWS
Trigger: GCTCCACGAGAAAGCTCTGCAGGTGCTCGTGGACCA...GCCTAGGCAAGGCCCTGCATCCCTTGCCTCAGGCCGGGCTGAGTGTGACTGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR GCA 90 bp CCTGGAGGAAGCAGAGTCCAAGCTGGCCCAGATGAGGCCCCGGGCAGCACTGCTCTGGGACTGGGGTTTTaGCTGCAGGGAAGGACAGGA +
Preference number: 4 (lower is better)
Translates to: PGGSRVQAGPDEAPGSTALGLGF*LQGRTG
Trigger: TCCTGTCCTTCCCTGCAGGCAAAACCCCAGTCCCAG...AGCAGTGCTGCCCGGGGCCTCATCTGGGCCAGCTTGGACTCTGCTTCCTCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR GCA 90 bp CAGCACGCCATTGTCAGTTCCAGGTCCACTCATCCCCTGCGTGTTGCCGGGACCTCATCCCCTGCGTGTTaGCGGGACCCACCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: QHAIVSSRSTHPLRVAGTSSPAC*RDPPSC
Trigger: GCAGGAAGGTGGGTCCCGGCAACACGCAGGGGATGA...GGTCCCGGCAACACGCAGGGGATGAGTGGACCTGGAACTGACAATGGCGTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR GCA 90 bp CTCACTGTCTCTTCAGGCCCCCACGGACGGCATGCCTGGGGAAGCCTAGTCTACGCACCTCTGGCAGGATaGCCCACACTGCTCCACAGG +
Preference number: 4 (lower is better)
Translates to: LTVSSGPHGRHAWGSLVYAPLAG*PTLLHR
Trigger: CCTGTGGAGCAGTGTGGGGCATCCTGCCAGAGGTGC...GTAGACTAGGCTTCCCCAGGCATGCCGTCCGTGGGGGCCTGAAGAGACAGTGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR GCA 90 bp GGCCCCCACGGACGGCATGCCTGGGGAAGCCTAGTCTACTTACCATCAGCACGTCCCCCACGGACGGCATaGCTGGGGAAGCCTAGTCTA +
Preference number: 4 (lower is better)
Translates to: GPHGRHAWGSLVYLPSARPPRTA*LGKPSL
Trigger: TAGACTAGGCTTCCCCAGGCATGCCGTCCGTGGGGG...ACGTGCTGATGGTAAGTAGACTAGGCTTCCCCAGGCATGCCGTCCGTGGGGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR GCA 90 bp CCCACATCTGCGAATGGGGCCAATGGCACTCACTGTCTCTTCAGGCCCCCACGGGGCCCAGAGCTTCCCTaGTGCTCCTGGAGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: PTSANGANGTHCLFRPPRGPELP*CSWRKQ
Trigger: CTGCTTCCTCCAGGAGCAGCAGGGAAGCTCTGGGCC...CCGTGGGGGCCTGAAGAGACAGTGAGTGCCATTGGCCCCATTCGCAGATGTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR TCA 90 bp GGCCCCCACGGACGGCATGCCTGGGGAAGCCTAGTCTACTTACCATCAGCACGTTCAGCCTGCAGTGCCTaGAACTCCAGCCTGTGCACC +
Preference number: 4 (lower is better)
Translates to: GPHGRHAWGSLVYLPSARSACSA*NSSLCT
Trigger: GGTGCACAGGCTGGAGTTTCAGGCACTGCAGGCTGA...ACGTGCTGATGGTAAGTAGACTAGGCTTCCCCAGGCATGCCGTCCGTGGGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR GCA 90 bp CTGCAGTCACACTCAGCCCGGCCTGAGGCAAGGGATGCAGGGCCTTGCCTAGGCGCGTCCCCTCTGCTGTaGCTAAACACCTCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: LQSHSARPEARDAGPCLGASPLL*LNTSQE
Trigger: TTCCTGAGAGGTGTTTAGGCACAGCAGAGGGGACGC...GCCTAGGCAAGGCCCTGCATCCCTTGCCTCAGGCCGGGCTGAGTGTGACTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR CCA 90 bp TCTGCGAATGGGGCCAATGGCACTCACTGTCTCTTCAGGCCCCCACGGACGGCAGGTCCGGAACGAGTCTaGGCTAAGGGTAGACCGGGA +
Preference number: 4 (lower is better)
Translates to: SANGANGTHCLFRPPRTAGPERV*AKGRPG
Trigger: TCCCGGTCTACCCTTAGCCCAGACTCGTTCCGGACC...TGCCGTCCGTGGGGGCCTGAAGAGACAGTGAGTGCCATTGGCCCCATTCGCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR CCA 90 bp CCTGGAGGAAGCAGAGTCCAAGCTGGCCCAGATGAGGCCCCGGGCAGCACTGCTGTGCTCCATGGCCACTaGTATGTCCGTCCAGTTCAG +
Preference number: 4 (lower is better)
Translates to: PGGSRVQAGPDEAPGSTAVLHGH*YVRPVQ
Trigger: CTGAACTGGACGGACATACCAGTGGCCATGGAGCAC...AGCAGTGCTGCCCGGGGCCTCATCTGGGCCAGCTTGGACTCTGCTTCCTCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR CCA 90 bp CAGCACGCCATTGTCAGTTCCAGGTCCACTCATCCCCTGCGTGTTGCCGGGACCGAGGCTGGTGCTCCATaGCCACTGGTATGTCCGTCC +
Preference number: 4 (lower is better)
Translates to: QHAIVSSRSTHPLRVAGTEAGAP*PLVCPS
Trigger: GGACGGACATACCAGTGGCCATGGAGCACCAGCCTC...GGTCCCGGCAACACGCAGGGGATGAGTGGACCTGGAACTGACAATGGCGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR CCA 90 bp CCCACATCTGCGAATGGGGCCAATGGCACTCACTGTCTCTTCAGGCCCCCACGGACCTGCAGAGCGGCCTaGAGGTTGGCTTTTGGCTCC +
Preference number: 4 (lower is better)
Translates to: PTSANGANGTHCLFRPPRTCRAA*RLAFGS
Trigger: GGAGCCAAAAGCCAACCTCCAGGCCGCTCTGCAGGT...CCGTGGGGGCCTGAAGAGACAGTGAGTGCCATTGGCCCCATTCGCAGATGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR CCA 90 bp GCCATTGTCAGTTCCAGGTCCACTCATCCCCTGCGTGTTGCCGGGACCCACCTTGCTTCTGTGTGGGTATaGCCAGTCGGGACGTGGCGC +
Preference number: 4 (lower is better)
Translates to: AIVSSRSTHPLRVAGTHLASVWV*PVGTWR
Trigger: GCGCCACGTCCCGACTGGCCATACCCACACAGAAGC...AAGGTGGGTCCCGGCAACACGCAGGGGATGAGTGGACCTGGAACTGACAATGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR TCA 90 bp CCCACATCTGCGAATGGGGCCAATGGCACTCACTGTCTCTTCAGGCCCCCACGGTTGCTGGCAGAAGGTTaGGGGCCTTGGTGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: PTSANGANGTHCLFRPPRLLAEG*GPWWCP
Trigger: TGGACACCACCAAGGCCCTCAACCTTCTGCCAGCAA...CCGTGGGGGCCTGAAGAGACAGTGAGTGCCATTGGCCCCATTCGCAGATGTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR TCA 90 bp CTGCAGTCACACTCAGCCCGGCCTGAGGCAAGGGATGCAGGGCCTTGCCTAGGCTGCCTAGGCAGAGAATaGTGCTCTCCGAGGCATCTA +
Preference number: 4 (lower is better)
Translates to: LQSHSARPEARDAGPCLGCLGRE*CSPRHL
Trigger: TAGATGCCTCGGAGAGCATCATTCTCTGCCTAGGCA...GCCTAGGCAAGGCCCTGCATCCCTTGCCTCAGGCCGGGCTGAGTGTGACTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR TCA 90 bp CCTTCACCTCTCTGGGAGAGCCAAGCTGTCCATCCGCTGGATCCCCAGGATGCTTGCCTGAGTGTCTGGTaGGCGAAGACGGAGCAGGCA +
Preference number: 4 (lower is better)
Translates to: PSPLWESQAVHPLDPQDACLSVW*AKTEQA
Trigger: TGCCTGCTCCGTCTTCGCTCACCAGACACTCAGGCA...AGCATCCTGGGGATCCAGCGGATGGACAGCTTGGCTCTCCCAGAGAGGTGAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR TCA 90 bp CGGGCAGCACTGCTTCTGTGTGGGTATGGCCAGTCGGGACGTGGCGCCACACACCAACCACACCATTGCTaGACAAAGCTGGGGAGTGAC +
Preference number: 4 (lower is better)
Translates to: RAALLLCGYGQSGRGATHQPHHC*TKLGSD
Trigger: GTCACTCCCCAGCTTTGTTCAGCAATGGTGTGGTTG...GTGTGTGGCGCCACGTCCCGACTGGCCATACCCACACAGAAGCAGTGCTGCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR TCA 90 bp ACAGGGCGGCTACCGAGGGGTGCAGGGCACAGTTACCATGGAGACGTAAAACACTCCTCCGAACTCTGGTaGAGGGCTGCCCAGCCTCAC +
Preference number: 4 (lower is better)
Translates to: TGRLPRGAGHSYHGDVKHSSELW*RAAQPH
Trigger: GTGAGGCTGGGCAGCCCTTCACCAGAGTTCGGAGGA...GTGTTTTACGTCTCCATGGTAACTGTGCCCTGCACCCCTCGGTAGCCGCCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR GCA 90 bp ACAGGGCGGCTACCGAGGGGTGCAGGGCACAGTTACCATGGAGACGTAAAACACGCGGCTACCGAGGGGTaGAGGGCACAGTTACCATGG +
Preference number: 4 (lower is better)
Translates to: TGRLPRGAGHSYHGDVKHAATEG*RAQLPW
Trigger: CCATGGTAACTGTGCCCTGCACCCCTCGGTAGCCGC...GTGTTTTACGTCTCCATGGTAACTGTGCCCTGCACCCCTCGGTAGCCGCCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR CCA 90 bp ATGGGGCCAATGGCACTCACTGTCTCTTCAGGCCCCCACGGACGGCATGCCTGGGGACTTGGGCACATCTaGCACACTAAAGTCCCCCTG +
Preference number: 4 (lower is better)
Translates to: MGPMALTVSSGPHGRHAWGLGHI*HTKVPL
Trigger: CAGGGGGACTTTAGTGTGCCAGATGTGCCCAAGTCC...CCAGGCATGCCGTCCGTGGGGGCCTGAAGAGACAGTGAGTGCCATTGGCCCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR CCA 90 bp TCTGCGAATGGGGCCAATGGCACTCACTGTCTCTTCAGGCCCCCACGGACGGCAGAGGACTCGATCACGTaGCAGAGACTCCACTTCCGG +
Preference number: 4 (lower is better)
Translates to: SANGANGTHCLFRPPRTAEDSIT*QRLHFR
Trigger: CCGGAAGTGGAGTCTCTGCCACGTGATCGAGTCCTC...TGCCGTCCGTGGGGGCCTGAAGAGACAGTGAGTGCCATTGGCCCCATTCGCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR CCA 90 bp CCCCGCGTCCCCTCTGCTGTGCCTAAACACCTCTCAGGAACACTTGGCAGCACGCTCTTCCTCTCCAGCTaGGACTGGGGTTTTGCCTGC +
Preference number: 4 (lower is better)
Translates to: PRVPSAVPKHLSGTLGSTLFLSS*DWGFAC
Trigger: GCAGGCAAAACCCCAGTCCCAGCTGGAGAGGAAGAG...CGTGCTGCCAAGTGTTCCTGAGAGGTGTTTAGGCACAGCAGAGGGGACGCGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR CCA 90 bp ATGGGGCCAATGGCACTCACTGTCTCTTCAGGCCCCCACGGACGGCATGCCTGGGCTCCTTCACCTCTCTaGGAGAGCCAAGCTGTCCAT +
Preference number: 4 (lower is better)
Translates to: MGPMALTVSSGPHGRHAWAPSPL*ESQAVH
Trigger: ATGGACAGCTTGGCTCTCCCAGAGAGGTGAAGGAGC...CCAGGCATGCCGTCCGTGGGGGCCTGAAGAGACAGTGAGTGCCATTGGCCCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR CCA 90 bp TGCCGGGACCCACCTTCCTGCGCTATCCCAGCACAACTCTCCAACCACACCATTCAGCCTGTGCACCTCTaGCAGGATGCCCCACACTGC +
Preference number: 4 (lower is better)
Translates to: CRDPPSCAIPAQLSNHTIQPVHL*QDAPHC
Trigger: GCAGTGTGGGGCATCCTGCCAGAGGTGCACAGGCTG...AATGGTGTGGTTGGAGAGTTGTGCTGGGATAGCGCAGGAAGGTGGGTCCCGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
3UTR CAA 72 bp CCATTGTCAGTTCCAGGTCCACTCATCCCCTGCGTGTaGCCGGGACCCACCTTCCTGCGCTATCCCAGCACA +
Preference number: 4 (lower is better)
Translates to: PLSVPGPLIPCV*PGPTFLRYPST
Trigger: TGTGCTGGGATAGCGCAGGAAGGTGGGTCCCGGCAACACGCAGGGGATGAGTGGACCTGGAACTGACAATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR TCA 90 bp CAGCACGCCATTGTCAGTTCCAGGTCCACTCATCCCCTGCGTGTTGCCGGGACCTCCAGTGAGCCATGCTaGGCGGTCCTTGTGAAGTCA +
Preference number: 4 (lower is better)
Translates to: QHAIVSSRSTHPLRVAGTSSEPC*AVLVKS
Trigger: TGACTTCACAAGGACCGCTCAGCATGGCTCACTGGA...GGTCCCGGCAACACGCAGGGGATGAGTGGACCTGGAACTGACAATGGCGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR TCA 90 bp GATGGTGCACATCCTCCTGACCAAGCAGGTACTGAATTCTCTGGAATTGCCCACCCAAGCTGGCCCAGATaGGGCCCCGGGCAGCACTGC +
Preference number: 4 (lower is better)
Translates to: DGAHPPDQAGTEFSGIAHPSWPR*GPGQHC
Trigger: GCAGTGCTGCCCGGGGCCTCATCTGGGCCAGCTTGG...GTGGGCAATTCCAGAGAATTCAGTACCTGCTTGGTCAGGAGGATGTGCACCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR GCA 90 bp CTGCAGTCACACTCAGCCCGGCCTGAGGCAAGGGATGCAGGGCCTTGCCTAGGCGCCAGACAGTCGATTTaGAGAGGCAGCTTTTCTAGG +
Preference number: 4 (lower is better)
Translates to: LQSHSARPEARDAGPCLGARQSI*RGSFSR
Trigger: CCTAGAAAAGCTGCCTCTGCAAATCGACTGTCTGGC...GCCTAGGCAAGGCCCTGCATCCCTTGCCTCAGGCCGGGCTGAGTGTGACTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR GCA 90 bp CCCCGCGTCCCCTCTGCTGTGCCTAAACACCTCTCAGGAACACTTGGCAGCACGGCCTTCTTTAGCACGTaGTCGCTCTCCTCGATGTGG +
Preference number: 4 (lower is better)
Translates to: PRVPSAVPKHLSGTLGSTAFFST*SLSSMW
Trigger: CCACATCGAGGAGAGCGAGCACGTGCTAAAGAAGGC...CGTGCTGCCAAGTGTTCCTGAGAGGTGTTTAGGCACAGCAGAGGGGACGCGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR GCA 90 bp ATGGGGCCAATGGCACTCACTGTCTCTTCAGGCCCCCACGGACGGCATGCCTGGTGGTGGTGTCCAGTTTaGTGTGGTGTAGCTCGAGGA +
Preference number: 4 (lower is better)
Translates to: MGPMALTVSSGPHGRHAWWWCPV*CGVARG
Trigger: TCCTCGAGCTACACCACAGCAAACTGGACACCACCA...CCAGGCATGCCGTCCGTGGGGGCCTGAAGAGACAGTGAGTGCCATTGGCCCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR GCA 90 bp CCTGGAGGAAGCAGAGTCCAAGCTGGCCCAGATGAGGCCCCGGGCAGCACTGCTAAACACTACACAGAATaGGAGCCATCGGGTCCATGC +
Preference number: 4 (lower is better)
Translates to: PGGSRVQAGPDEAPGSTAKHYTE*EPSGPC
Trigger: GCATGGACCCGATGGCTCGCATTCTGTGTAGTGTTT...AGCAGTGCTGCCCGGGGCCTCATCTGGGCCAGCTTGGACTCTGCTTCCTCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR GCA 90 bp TCCCAGAGTCAGGGAAGTGGGAGAGAAAGCCTGGGTAGGGCAGTGAGGGAAGTGCGGGACCCACCTTCCTaGGCTATCCCAGCACAACTC +
Preference number: 4 (lower is better)
Translates to: SQSQGSGRESLGRAVREVRDPPS*AIPAQL
Trigger: GAGTTGTGCTGGGATAGCGCAGGAAGGTGGGTCCCG...CACTTCCCTCACTGCCCTACCCAGGCTTTCTCTCCCACTTCCCTGACTCTGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR GCA 90 bp CAGGAACACTTGGCAGCACGCCATTGTCAGTTCCAGGTCCACTCATCCCCTGCGCAGGATGCCCCACACTaGTCCACAGGTTTGGCGGTG +
Preference number: 4 (lower is better)
Translates to: QEHLAARHCQFQVHSSPAQDAPH*STGLAV
Trigger: CACCGCCAAACCTGTGGAGCAGTGTGGGGCATCCTG...CGCAGGGGATGAGTGGACCTGGAACTGACAATGGCGTGCTGCCAAGTGTTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR CCA 90 bp GGCCCCCACGGACGGCATGCCTGGGGAAGCCTAGTCTACTTACCATCAGCACGTGGGAGTTGGCTTTCTTaGACTGGTCCACGAGCACCT +
Preference number: 4 (lower is better)
Translates to: GPHGRHAWGSLVYLPSARGSWLS*TGPRAP
Trigger: AGGTGCTCGTGGACCAGTCCAAGAAAGCCAACTCCC...ACGTGCTGATGGTAAGTAGACTAGGCTTCCCCAGGCATGCCGTCCGTGGGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR CCA 90 bp GGCCCCCACGGACGGCATGCCTGGGGAAGCCTAGTCTACTTACCATCAGCACGTATTGCTGAACAAAGCTaGGGAGTGACGGCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: GPHGRHAWGSLVYLPSARIAEQS*GVTARA
Trigger: TGCCCTGGCCGTCACTCCCCAGCTTTGTTCAGCAAT...ACGTGCTGATGGTAAGTAGACTAGGCTTCCCCAGGCATGCCGTCCGTGGGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR TCA 90 bp GCCATTGTCAGTTCCAGGTCCACTCATCCCCTGCGTGTTGCCGGGACCCACCTTGAGGCAACACTGCAATaGTGTAGGGAGGCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: AIVSSRSTHPLRVAGTHLEATLQ*CREAGA
Trigger: AGCACCAGCCTCCCTACATCATTGCAGTGTTGCCTC...AAGGTGGGTCCCGGCAACACGCAGGGGATGAGTGGACCTGGAACTGACAATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR TCA 90 bp CCTTCACCTCTCTGGGAGAGCCAAGCTGTCCATCCGCTGGATCCCCAGGATGCTTCCTCGATGTGGCAGTaGTTGTTCTCCAGGCGTAGC +
Preference number: 4 (lower is better)
Translates to: PSPLWESQAVHPLDPQDASSMWQ*LFSRRS
Trigger: GCTACGCCTGGAGAACAATCACTGCCACATCGAGGA...AGCATCCTGGGGATCCAGCGGATGGACAGCTTGGCTCTCCCAGAGAGGTGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR TCA 90 bp CCTCTCTGGGAGAGCCAAGCTGTCCATCCGCTGGATCCCCAGGATGCTGGGCTCGTTTCCTTGTTCAGGTaGCTGGTGTGCAAAGGCAAG +
Preference number: 4 (lower is better)
Translates to: PLWESQAVHPLDPQDAGLVSLFR*LVCKGK
Trigger: CTTGCCTTTGCACACCAGTCACCTGAACAAGGAAAC...GAGCCCAGCATCCTGGGGATCCAGCGGATGGACAGCTTGGCTCTCCCAGAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564994.5
CDS-3UTR TCA 90 bp CGGGCAGCACTGCTTCTGTGTGGGTATGGCCAGTCGGGACGTGGCGCCACACACTTACCATCAGCACGTTaGTCTGTCACACAGCATGGA +
Preference number: 4 (lower is better)
Translates to: RAALLLCGYGQSGRGATHLPSAR*SVTQHG
Trigger: TCCATGCTGTGTGACAGATCAACGTGCTGATGGTAA...GTGTGTGGCGCCACGTCCCGACTGGCCATACCCACACAGAAGCAGTGCTGCCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR GCA 90 bp GGCCCCCACGGACGGCATGCCTGGGGAAGCCTAGTCTACTTACCATCAGCACGTAGATGCTGCAGATACTaGACTGTCCTCTCGTGGCCT +
Preference number: 4 (lower is better)
Translates to: GPHGRHAWGSLVYLPSARRCCRY*TVLSWP
Trigger: AGGCCACGAGAGGACAGTGCAGTATCTGCAGCATCT...ACGTGCTGATGGTAAGTAGACTAGGCTTCCCCAGGCATGCCGTCCGTGGGGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR GCA 90 bp CTGCAGTCACACTCAGCCCGGCCTGAGGCAAGGGATGCAGGGCCTTGCCTAGGCTTTTCTGTGCCCAGATaGTGCAGATACTGCACTGTC +
Preference number: 4 (lower is better)
Translates to: LQSHSARPEARDAGPCLGFSVPR*CRYCTV
Trigger: GACAGTGCAGTATCTGCAGCATCTGGGCACAGAAAA...GCCTAGGCAAGGCCCTGCATCCCTTGCCTCAGGCCGGGCTGAGTGTGACTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR GCA 90 bp GCTCCTTCACCTCTCTGGGAGAGCCAAGCTGTCCATCCGCTGGATCCCCAGGATAGAGTCTCCCACATCTaGGAATGGGGCCAATGGCAC +
Preference number: 4 (lower is better)
Translates to: APSPLWESQAVHPLDPQDRVSHI*EWGQWH
Trigger: GTGCCATTGGCCCCATTCGCAGATGTGGGAGACTCT...ATCCTGGGGATCCAGCGGATGGACAGCTTGGCTCTCCCAGAGAGGTGAAGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR CCA 90 bp TCTGCGAATGGGGCCAATGGCACTCACTGTCTCTTCAGGCCCCCACGGACGGCATTTCACACCACGCCATaGACTTGGGCACATCTGGCA +
Preference number: 4 (lower is better)
Translates to: SANGANGTHCLFRPPRTAFHTTP*TWAHLA
Trigger: TGCCAGATGTGCCCAAGTCCATGGCGTGGTGTGAAA...TGCCGTCCGTGGGGGCCTGAAGAGACAGTGAGTGCCATTGGCCCCATTCGCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR CCA 90 bp TCTGCGAATGGGGCCAATGGCACTCACTGTCTCTTCAGGCCCCCACGGACGGCAACGGTGAGATCATCCTaGCCCACAGCCACTTTTCCA +
Preference number: 4 (lower is better)
Translates to: SANGANGTHCLFRPPRTATVRSS*PTATFP
Trigger: TGGAAAAGTGGCTGTGGGCCAGGATGATCTCACCGT...TGCCGTCCGTGGGGGCCTGAAGAGACAGTGAGTGCCATTGGCCCCATTCGCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR CCA 90 bp CTCACTGTCTCTTCAGGCCCCCACGGACGGCATGCCTGGGGAAGCCTAGTCTACGGAGAGCACAGGCAATaGGTTGGGATACTGCAACTG +
Preference number: 4 (lower is better)
Translates to: LTVSSGPHGRHAWGSLVYGEHRQ*VGILQL
Trigger: CAGTTGCAGTATCCCAACCCATTGCCTGTGCTCTCC...GTAGACTAGGCTTCCCCAGGCATGCCGTCCGTGGGGGCCTGAAGAGACAGTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR CCA 90 bp CCTTCACCTCTCTGGGAGAGCCAAGCTGTCCATCCGCTGGATCCCCAGGATGCTTGGATCAGGCAGTTGTaGAACCGAGAGCCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: PSPLWESQAVHPLDPQDAWIRQL*NREPVS
Trigger: GGAGACAGGCTCTCGGTTCCACAACTGCCTGATCCA...AGCATCCTGGGGATCCAGCGGATGGACAGCTTGGCTCTCCCAGAGAGGTGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR CCA 90 bp ACAGGGCGGCTACCGAGGGGTGCAGGGCACAGTTACCATGGAGACGTAAAACACAGCACTGCTTCTGTGTaGGTATGGCCAGTCGGGACG +
Preference number: 4 (lower is better)
Translates to: TGRLPRGAGHSYHGDVKHSTASV*VWPVGT
Trigger: CGTCCCGACTGGCCATACCCACACAGAAGCAGTGCT...GTGTTTTACGTCTCCATGGTAACTGTGCCCTGCACCCCTCGGTAGCCGCCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR TCA 90 bp CGGGCAGCACTGCTTCTGTGTGGGTATGGCCAGTCGGGACGTGGCGCCACACACCCTCCCAAACATGGATaGTGTGTTCCAGATAAGGAA +
Preference number: 4 (lower is better)
Translates to: RAALLLCGYGQSGRGATHPPKHG*CVPDKE
Trigger: TTCCTTATCTGGAACACATCATCCATGTTTGGGAGG...GTGTGTGGCGCCACGTCCCGACTGGCCATACCCACACAGAAGCAGTGCTGCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR GCA 90 bp CAGGAACACTTGGCAGCACGCCATTGTCAGTTCCAGGTCCACTCATCCCCTGCGGTTCATGTTTCCCCATaGGCCCCAACAGGAGAGCTC +
Preference number: 4 (lower is better)
Translates to: QEHLAARHCQFQVHSSPAVHVSP*APTGEL
Trigger: GAGCTCTCCTGTTGGGGCGCATGGGGAAACATGAAC...CGCAGGGGATGAGTGGACCTGGAACTGACAATGGCGTGCTGCCAAGTGTTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR GCA 90 bp CTGCAGTCACACTCAGCCCGGCCTGAGGCAAGGGATGCAGGGCCTTGCCTAGGCATGATGCACTTCACCTaGTGGTGTAAAATCCGCTCT +
Preference number: 4 (lower is better)
Translates to: LQSHSARPEARDAGPCLGMMHFT*WCKIRS
Trigger: AGAGCGGATTTTACACCAGCAGGTGAAGTGCATCAT...GCCTAGGCAAGGCCCTGCATCCCTTGCCTCAGGCCGGGCTGAGTGTGACTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR GCA 90 bp GCTACCGAGGGGTGCAGGGCACAGTTACCATGGAGACGTAAAACACTACACAGACCCATCCTCAGGAGCTaGAGTCACACTCAGCCCGGC +
Preference number: 4 (lower is better)
Translates to: ATEGCRAQLPWRRKTLHRPILRS*SHTQPG
Trigger: GCCGGGCTGAGTGTGACTGCAGCTCCTGAGGATGGG...TCTGTGTAGTGTTTTACGTCTCCATGGTAACTGTGCCCTGCACCCCTCGGTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR CCA 90 bp TCTGCGAATGGGGCCAATGGCACTCACTGTCTCTTCAGGCCCCCACGGACGGCACCGGTCTCTGTGTGCTaGAGGTCACAAGTAAACAGT +
Preference number: 4 (lower is better)
Translates to: SANGANGTHCLFRPPRTAPVSVC*RSQVNS
Trigger: ACTGTTTACTTGTGACCTCCAGCACACAGAGACCGG...TGCCGTCCGTGGGGGCCTGAAGAGACAGTGAGTGCCATTGGCCCCATTCGCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR CCA 90 bp CCCACATCTGCGAATGGGGCCAATGGCACTCACTGTCTCTTCAGGCCCCCACGGGCACAGGCAATGGGTTaGGATACTGCAACTGCTTTC +
Preference number: 4 (lower is better)
Translates to: PTSANGANGTHCLFRPPRAQAMG*DTATAF
Trigger: GAAAGCAGTTGCAGTATCCCAACCCATTGCCTGTGC...CCGTGGGGGCCTGAAGAGACAGTGAGTGCCATTGGCCCCATTCGCAGATGTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR CCA 90 bp CCCCGCGTCCCCTCTGCTGTGCCTAAACACCTCTCAGGAACACTTGGCAGCACGTGCAGAGCTTTCTCGTaGAGCCCCTTCTTCTCATAC +
Preference number: 4 (lower is better)
Translates to: PRVPSAVPKHLSGTLGSTCRAFS*SPFFSY
Trigger: GTATGAGAAGAAGGGGCTCCACGAGAAAGCTCTGCA...CGTGCTGCCAAGTGTTCCTGAGAGGTGTTTAGGCACAGCAGAGGGGACGCGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR CCA 90 bp CCCACATCTGCGAATGGGGCCAATGGCACTCACTGTCTCTTCAGGCCCCCACGGCTTTCAGAGGGGAGTTaGCTTTCTTGGACTGGTCCA +
Preference number: 4 (lower is better)
Translates to: PTSANGANGTHCLFRPPRLSEGS*LSWTGP
Trigger: TGGACCAGTCCAAGAAAGCCAACTCCCCTCTGAAAG...CCGTGGGGGCCTGAAGAGACAGTGAGTGCCATTGGCCCCATTCGCAGATGTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR CCA 90 bp CAGGAACACTTGGCAGCACGCCATTGTCAGTTCCAGGTCCACTCATCCCCTGCGAAATGGGGAGCCTTGTaGTGGTGGCAGCCAGGATTC +
Preference number: 4 (lower is better)
Translates to: QEHLAARHCQFQVHSSPAKWGAL*WWQPGF
Trigger: GAATCCTGGCTGCCACCACCACAAGGCTCCCCATTT...CGCAGGGGATGAGTGGACCTGGAACTGACAATGGCGTGCTGCCAAGTGTTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR CCA 90 bp CTGCAGTCACACTCAGCCCGGCCTGAGGCAAGGGATGCAGGGCCTTGCCTAGGCTGGAGCTTGGGAGCATaGGATCATGTATGTATACCA +
Preference number: 4 (lower is better)
Translates to: LQSHSARPEARDAGPCLGWSLGA*DHVCIP
Trigger: TGGTATACATACATGATCCCATGCTCCCAAGCTCCA...GCCTAGGCAAGGCCCTGCATCCCTTGCCTCAGGCCGGGCTGAGTGTGACTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR TCA 90 bp GCCATTGTCAGTTCCAGGTCCACTCATCCCCTGCGTGTTGCCGGGACCCACCTTGTTTCCTTGTTCAGGTaGCTGGTGTGCAAAGGCAAG +
Preference number: 4 (lower is better)
Translates to: AIVSSRSTHPLRVAGTHLVSLFR*LVCKGK
Trigger: CTTGCCTTTGCACACCAGTCACCTGAACAAGGAAAC...AAGGTGGGTCCCGGCAACACGCAGGGGATGAGTGGACCTGGAACTGACAATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR TCA 90 bp CAGCACGCCATTGTCAGTTCCAGGTCCACTCATCCCCTGCGTGTTGCCGGGACCAAGACACTGGTGCAGTaGGACTTCGAGTCTGCAAAA +
Preference number: 4 (lower is better)
Translates to: QHAIVSSRSTHPLRVAGTKTLVQ*DFESAK
Trigger: TTTTGCAGACTCGAAGTCTCACTGCACCAGTGTCTT...GGTCCCGGCAACACGCAGGGGATGAGTGGACCTGGAACTGACAATGGCGTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR GCA 90 bp CCCCGCGTCCCCTCTGCTGTGCCTAAACACCTCTCAGGAACACTTGGCAGCACGGCCTTTGCAATTCAATaGTTTGGACCAGAAGCCTCG +
Preference number: 4 (lower is better)
Translates to: PRVPSAVPKHLSGTLGSTAFAIQ*FGPEAS
Trigger: CGAGGCTTCTGGTCCAAAGCATTGAATTGCAAAGGC...CGTGCTGCCAAGTGTTCCTGAGAGGTGTTTAGGCACAGCAGAGGGGACGCGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR GCA 90 bp CCTGGAGGAAGCAGAGTCCAAGCTGGCCCAGATGAGGCCCCGGGCAGCACTGCTATCATCTTTCATTTCTaGGAGCTGCAGAGCCAATTC +
Preference number: 4 (lower is better)
Translates to: PGGSRVQAGPDEAPGSTAIIFHF*ELQSQF
Trigger: GAATTGGCTCTGCAGCTCGCAGAAATGAAAGATGAT...AGCAGTGCTGCCCGGGGCCTCATCTGGGCCAGCTTGGACTCTGCTTCCTCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR GCA 90 bp CAGGTGCTCCTTCACCTCTCTGGGAGAGCCAAGCTGTCCATCCGCTGGATCCCCATTGATCTGAGTGTTTaGTGGCAGAAGGTTGAGGGC +
Preference number: 4 (lower is better)
Translates to: QVLLHLSGRAKLSIRWIPIDLSV*WQKVEG
Trigger: GCCCTCAACCTTCTGCCAGCAAACACTCAGATCAAT...GGGGATCCAGCGGATGGACAGCTTGGCTCTCCCAGAGAGGTGAAGGAGCACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR GCA 90 bp GTTGAGGGAAGGAAGAATGGAGCTTGGGAGCATGGGATCATGTATGTATACCAGGCGTCCTGCTGTTCTTaGCCCCCGCGTCCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: VEGRKNGAWEHGIMYVYQASCCS*PPRPLC
Trigger: GCAGAGGGGACGCGGGGGGCAAGAACAGCAGGACGC...CTGGTATACATACATGATCCCATGCTCCCAAGCTCCATTCTTCCTTCCCTCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR CCA 90 bp GCTACCGAGGGGTGCAGGGCACAGTTACCATGGAGACGTAAAACACTACACAGACGAAAGCGTCGTGCATaGCGGCAAGGGGAGAGTTGC +
Preference number: 4 (lower is better)
Translates to: ATEGCRAQLPWRRKTLHRRKRRA*RQGESC
Trigger: GCAACTCTCCCCTTGCCGCCATGCACGACGCTTTCG...TCTGTGTAGTGTTTTACGTCTCCATGGTAACTGTGCCCTGCACCCCTCGGTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR CCA 90 bp GCCATTGTCAGTTCCAGGTCCACTCATCCCCTGCGTGTTGCCGGGACCCACCTTAGAAGTTGTTGGATTTaGGTTGCCATGGGGACAGGG +
Preference number: 4 (lower is better)
Translates to: AIVSSRSTHPLRVAGTHLRSCWI*VAMGTG
Trigger: CCCTGTCCCCATGGCAACCCAAATCCAACAACTTCT...AAGGTGGGTCCCGGCAACACGCAGGGGATGAGTGGACCTGGAACTGACAATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR CCA 90 bp TCCCAGAGTCAGGGAAGTGGGAGAGAAAGCCTGGGTAGGGCAGTGAGGGAAGTGTACAGGCCCATCACATaGGTGGGATCTGTGCCAAGT +
Preference number: 4 (lower is better)
Translates to: SQSQGSGRESLGRAVREVYRPIT*VGSVPS
Trigger: ACTTGGCACAGATCCCACCCATGTGATGGGCCTGTA...CACTTCCCTCACTGCCCTACCCAGGCTTTCTCTCCCACTTCCCTGACTCTGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR CCA 90 bp ACAGGGCGGCTACCGAGGGGTGCAGGGCACAGTTACCATGGAGACGTAAAACACCTTCAGGCCATCTTCTaGGAAGTCTCTCAGCACCCA +
Preference number: 4 (lower is better)
Translates to: TGRLPRGAGHSYHGDVKHLQAIF*EVSQHP
Trigger: TGGGTGCTGAGAGACTTCCCAGAAGATGGCCTGAAG...GTGTTTTACGTCTCCATGGTAACTGTGCCCTGCACCCCTCGGTAGCCGCCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR CCA 90 bp CCCACATCTGCGAATGGGGCCAATGGCACTCACTGTCTCTTCAGGCCCCCACGGACAGATGAGCCGGCCTaGATCATAGTAGCTGGAAAT +
Preference number: 4 (lower is better)
Translates to: PTSANGANGTHCLFRPPRTDEPA*IIVAGN
Trigger: ATTTCCAGCTACTATGATCCAGGCCGGCTCATCTGT...CCGTGGGGGCCTGAAGAGACAGTGAGTGCCATTGGCCCCATTCGCAGATGTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR CCA 90 bp GCTACCGAGGGGTGCAGGGCACAGTTACCATGGAGACGTAAAACACTACACAGACCAGGCAGTGAATGCTaGGGGGCGACAGGTACATCC +
Preference number: 4 (lower is better)
Translates to: ATEGCRAQLPWRRKTLHRPGSEC*GATGTS
Trigger: GGATGTACCTGTCGCCCCCCAGCATTCACTGCCTGG...TCTGTGTAGTGTTTTACGTCTCCATGGTAACTGTGCCCTGCACCCCTCGGTAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR CCA 90 bp TGTCTCTTCAGGCCCCCACGGACGGCATGCCTGGGGAAGCCTAGTCTACTTACCGATCTGAGTGTTTGCTaGCAGAAGGTTGAGGGCCTT +
Preference number: 4 (lower is better)
Translates to: CLFRPPRTACLGKPSLLTDLSVC*QKVEGL
Trigger: AAGGCCCTCAACCTTCTGCCAGCAAACACTCAGATC...GGTAAGTAGACTAGGCTTCCCCAGGCATGCCGTCCGTGGGGGCCTGAAGAGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR CCA 90 bp CAGGTGCTCCTTCACCTCTCTGGGAGAGCCAAGCTGTCCATCCGCTGGATCCCCAAAATCCGCTCTTCCTaGACCCTCAGGAATTCTGCA +
Preference number: 4 (lower is better)
Translates to: QVLLHLSGRAKLSIRWIPKIRSS*TLRNSA
Trigger: TGCAGAATTCCTGAGGGTCCAGGAAGAGCGGATTTT...GGGGATCCAGCGGATGGACAGCTTGGCTCTCCCAGAGAGGTGAAGGAGCACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318006.10
ENST00000564994.5
CDS-3UTR CCA 90 bp CAGGTGCTCCTTCACCTCTCTGGGAGAGCCAAGCTGTCCATCCGCTGGATCCCCGGCTCAAGTGTCAGCTaGGTTTACCTCTTTGGAACA +
Preference number: 4 (lower is better)
Translates to: QVLLHLSGRAKLSIRWIPGSSVS*VYLFGT
Trigger: TGTTCCAAAGAGGTAAACCCAGCTGACACTTGAGCC...GGGGATCCAGCGGATGGACAGCTTGGCTCTCCCAGAGAGGTGAAGGAGCACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318006.10
ENST00000564994.5
CDS-3UTR CCA 90 bp CAGCACGCCATTGTCAGTTCCAGGTCCACTCATCCCCTGCGTGTTGCCGGGACCAGTGCTGTTCTCTCATaGAACTCTCCAGTGAGCCAT +
Preference number: 4 (lower is better)
Translates to: QHAIVSSRSTHPLRVAGTSAVLS*NSPVSH
Trigger: ATGGCTCACTGGAGAGTTCCATGAGAGAACAGCACT...GGTCCCGGCAACACGCAGGGGATGAGTGGACCTGGAACTGACAATGGCGTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR CCA 90 bp CAGGAACACTTGGCAGCACGCCATTGTCAGTTCCAGGTCCACTCATCCCCTGCGCCTCTCAGGAACACTTaGCAGCACGCCATTGTCAGT +
Preference number: 4 (lower is better)
Translates to: QEHLAARHCQFQVHSSPAPLRNT*QHAIVS
Trigger: ACTGACAATGGCGTGCTGCCAAGTGTTCCTGAGAGG...CGCAGGGGATGAGTGGACCTGGAACTGACAATGGCGTGCTGCCAAGTGTTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
3UTR CAA 72 bp CAGAATGCGAGCCATCGGGTCCATGCGGCCAGAAGCTaGAGTGCTGTTCTCTCATGGAACTCTCCAGTGAGC +
Preference number: 4 (lower is better)
Translates to: QNASHRVHAARS*SAVLSWNSPVS
Trigger: GCTCACTGGAGAGTTCCATGAGAGAACAGCACTCAAGCTTCTGGCCGCATGGACCCGATGGCTCGCATTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR TCA 90 bp CCTGGAGGAAGCAGAGTCCAAGCTGGCCCAGATGAGGCCCCGGGCAGCACTGCTACCGTAGTGATTTGTTaGAATGTCAATAGGTCATGG +
Preference number: 4 (lower is better)
Translates to: PGGSRVQAGPDEAPGSTATVVIC*NVNRSW
Trigger: CCATGACCTATTGACATTTCAACAAATCACTACGGT...AGCAGTGCTGCCCGGGGCCTCATCTGGGCCAGCTTGGACTCTGCTTCCTCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR TCA 90 bp GGCCCCCACGGACGGCATGCCTGGGGAAGCCTAGTCTACTTACCATCAGCACGTTGCTCCCTTTGCCTTTaGAACCGTAGTGATTTGTTG +
Preference number: 4 (lower is better)
Translates to: GPHGRHAWGSLVYLPSARCSLCL*NRSDLL
Trigger: CAACAAATCACTACGGTTTCAAAGGCAAAGGGAGCA...ACGTGCTGATGGTAAGTAGACTAGGCTTCCCCAGGCATGCCGTCCGTGGGGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR TCA 90 bp GCTACCGAGGGGTGCAGGGCACAGTTACCATGGAGACGTAAAACACTACACAGATGGGAGTGCCTTCCATaGGCGGTGAGGTGCTTGACT +
Preference number: 4 (lower is better)
Translates to: ATEGCRAQLPWRRKTLHRWECLP*AVRCLT
Trigger: AGTCAAGCACCTCACCGCTCATGGAAGGCACTCCCA...TCTGTGTAGTGTTTTACGTCTCCATGGTAACTGTGCCCTGCACCCCTCGGTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR TCA 90 bp ACAGGGCGGCTACCGAGGGGTGCAGGGCACAGTTACCATGGAGACGTAAAACACGCTTCTTCTTGGATTTaGTGGTGGGAGTGCCTTCCA +
Preference number: 4 (lower is better)
Translates to: TGRLPRGAGHSYHGDVKHASSWI*WWECLP
Trigger: TGGAAGGCACTCCCACCATCAAATCCAAGAAGAAGC...GTGTTTTACGTCTCCATGGTAACTGTGCCCTGCACCCCTCGGTAGCCGCCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR GCA 90 bp CTCACTGTCTCTTCAGGCCCCCACGGACGGCATGCCTGGGGAAGCCTAGTCTACTCCTTCATCAGACCTTaGACCTTCTCACAGTATAGC +
Preference number: 4 (lower is better)
Translates to: LTVSSGPHGRHAWGSLVYSFIRP*TFSQYS
Trigger: GCTATACTGTGAGAAGGTGCAAGGTCTGATGAAGGA...GTAGACTAGGCTTCCCCAGGCATGCCGTCCGTGGGGGCCTGAAGAGACAGTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR GCA 90 bp CCTTCACCTCTCTGGGAGAGCCAAGCTGTCCATCCGCTGGATCCCCAGGATGCTAACATGAGGAGCTTTTaGCGGTATTCTCCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: PSPLWESQAVHPLDPQDANMRSF*RYSPSS
Trigger: TGAGCTGGGAGAATACCGGCAAAAGCTCCTCATGTT...AGCATCCTGGGGATCCAGCGGATGGACAGCTTGGCTCTCCCAGAGAGGTGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR GCA 90 bp ACAGGGCGGCTACCGAGGGGTGCAGGGCACAGTTACCATGGAGACGTAAAACACGGCCAGAAGCTTGAGTaGTGTTCTCTCATGGAACTC +
Preference number: 4 (lower is better)
Translates to: TGRLPRGAGHSYHGDVKHGQKLE*CSLMEL
Trigger: GAGTTCCATGAGAGAACAGCACTCAAGCTTCTGGCC...GTGTTTTACGTCTCCATGGTAACTGTGCCCTGCACCCCTCGGTAGCCGCCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR GCA 90 bp CACAGGTTTGGCGGTGAGTTATTTTTAAACCAGCGTCCTGCTGTTCTTGCCCCCGAGCCATCGGGTCCATaGGGCCAGAAGCTTGAGTGC +
Preference number: 4 (lower is better)
Translates to: HRFGGELFLNQRPAVLAPEPSGP*GQKLEC
Trigger: GCACTCAAGCTTCTGGCCGCATGGACCCGATGGCTC...GGGGGCAAGAACAGCAGGACGCTGGTTTAAAAATAACTCACCGCCAAACCTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR CCA 90 bp ATGGGGCCAATGGCACTCACTGTCTCTTCAGGCCCCCACGGACGGCATGCCTGGCTGGGTTTACCTCTTTaGAACAGAAGTAATGGACGA +
Preference number: 4 (lower is better)
Translates to: MGPMALTVSSGPHGRHAWLGLPL*NRSNGR
Trigger: TCGTCCATTACTTCTGTTCCAAAGAGGTAAACCCAG...CCAGGCATGCCGTCCGTGGGGGCCTGAAGAGACAGTGAGTGCCATTGGCCCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR CCA 90 bp CCTTCACCTCTCTGGGAGAGCCAAGCTGTCCATCCGCTGGATCCCCAGGATGCTGGCTCAAGTGTCAGCTaGGTTTACCTCTTTGGAACA +
Preference number: 4 (lower is better)
Translates to: PSPLWESQAVHPLDPQDAGSSVS*VYLFGT
Trigger: TGTTCCAAAGAGGTAAACCCAGCTGACACTTGAGCC...AGCATCCTGGGGATCCAGCGGATGGACAGCTTGGCTCTCCCAGAGAGGTGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318006.10
ENST00000564994.5
CDS-3UTR CCA 90 bp CTGGATCCCCAGGATGCTGGGCTCAAGTGTCAGCTGGGTTTACCTCTTTGGAACAAATGGGGAGCCTTGTaGTGGTGGCAGCCAGGATTC +
Preference number: 4 (lower is better)
Translates to: LDPQDAGLKCQLGLPLWNKWGAL*WWQPGF
Trigger: GAATCCTGGCTGCCACCACCACAAGGCTCCCCATTT...GTTCCAAAGAGGTAAACCCAGCTGACACTTGAGCCCAGCATCCTGGGGATCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564994.5
3UTR CAA 72 bp CCTAAACACCTCTCAGGAACACTTGGCAGCACGCCATaGTCAGTTCCAGGTCCACTCATCCCCTGCGTGTTG +
Preference number: 4 (lower is better)
Translates to: PKHLSGTLGSTP*SVPGPLIPCVL
Trigger: CAACACGCAGGGGATGAGTGGACCTGGAACTGACAATGGCGTGCTGCCAAGTGTTCCTGAGAGGTGTTTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
3UTR CAA 72 bp TCCCCTCTGCTGTGCCTAAACACCTCTCAGGAACACTaGGCAGCACGCCATTGTCAGTTCCAGGTCCACTCA +
Preference number: 4 (lower is better)
Translates to: SPLLCLNTSQEH*AARHCQFQVHS
Trigger: TGAGTGGACCTGGAACTGACAATGGCGTGCTGCCAAGTGTTCCTGAGAGGTGTTTAGGCACAGCAGAGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR TCA 90 bp CTCACTGTCTCTTCAGGCCCCCACGGACGGCATGCCTGGGGAAGCCTAGTCTACAGCTTCTTTACCAATTaGCTTCGTTTCTGTGTCAGG +
Preference number: 4 (lower is better)
Translates to: LTVSSGPHGRHAWGSLVYSFFTN*LRFCVR
Trigger: CCTGACACAGAAACGAAGTCAATTGGTAAAGAAGCT...GTAGACTAGGCTTCCCCAGGCATGCCGTCCGTGGGGGCCTGAAGAGACAGTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR TCA 90 bp CAGCACGCCATTGTCAGTTCCAGGTCCACTCATCCCCTGCGTGTTGCCGGGACCGGTTACAAACACTTGTaGCAAGTTTCCTTGTTCAGG +
Preference number: 4 (lower is better)
Translates to: QHAIVSSRSTHPLRVAGTGYKHL*QVSLFR
Trigger: CCTGAACAAGGAAACTTGTCACAAGTGTTTGTAACC...GGTCCCGGCAACACGCAGGGGATGAGTGGACCTGGAACTGACAATGGCGTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR TCA 90 bp AAGATGGTGCACATCCTCCTGACCAAGCAGGTACTGAATTCTCTGGAATTGCCCAACAAAGCTGGGGAGTaGCGGCCAGGGCAGGCTGTA +
Preference number: 4 (lower is better)
Translates to: KMVHILLTKQVLNSLELPNKAGE*RPGQAV
Trigger: TACAGCCTGCCCTGGCCGTCACTCCCCAGCTTTGTT...GGGCAATTCCAGAGAATTCAGTACCTGCTTGGTCAGGAGGATGTGCACCATCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR GCA 90 bp AAAAGCTGGCAATGCCAGACCATGAGTCTAATTAATTCAGAGTTGTTCCAGGGCCGGCAAGGGGAGAGTTaGCACCGCCGTCTCGCCCAG +
Preference number: 4 (lower is better)
Translates to: KSWQCQTMSLINSELFQGRQGES*HRRLAQ
Trigger: CTGGGCGAGACGGCGGTGGCAACTCTCCCCTTGCCG...GCCCTGGAACAACTCTGAATTAATTAGACTCATGGTCTGGCATTGCCAGCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR GCA 90 bp TGTCTCTTCAGGCCCCCACGGACGGCATGCCTGGGGAAGCCTAGTCTACTTACCATGAAACGGGGCCTTTaGAATTCAATGCTTTGGACC +
Preference number: 4 (lower is better)
Translates to: CLFRPPRTACLGKPSLLTMKRGL*NSMLWT
Trigger: GGTCCAAAGCATTGAATTGCAAAGGCCCCGTTTCAT...GGTAAGTAGACTAGGCTTCCCCAGGCATGCCGTCCGTGGGGGCCTGAAGAGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR GCA 90 bp CAGCACGCCATTGTCAGTTCCAGGTCCACTCATCCCCTGCGTGTTGCCGGGACCAGTTTAGCAAAGACCTaGATGGACTCATCAAAACGC +
Preference number: 4 (lower is better)
Translates to: QHAIVSSRSTHPLRVAGTSLAKT*MDSSKR
Trigger: GCGTTTTGATGAGTCCATGCAGGTCTTTGCTAAACT...GGTCCCGGCAACACGCAGGGGATGAGTGGACCTGGAACTGACAATGGCGTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR GCA 90 bp AAGATGGTGCACATCCTCCTGACCAAGCAGGTACTGAATTCTCTGGAATTGCCCTGTAGCTCGAGGACCTaGAGAGCGGCCTGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: KMVHILLTKQVLNSLELPCSSRT*RAAWRL
Trigger: CAACCTCCAGGCCGCTCTGCAGGTCCTCGAGCTACA...GGGCAATTCCAGAGAATTCAGTACCTGCTTGGTCAGGAGGATGTGCACCATCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR GCA 90 bp CCTCTCTGGGAGAGCCAAGCTGTCCATCCGCTGGATCCCCAGGATGCTGGGCTCTCCATTGGGGTATCTTaGAAATGCACATACATTGCA +
Preference number: 4 (lower is better)
Translates to: PLWESQAVHPLDPQDAGLSIGVS*KCTYIA
Trigger: TGCAATGTATGTGCATTTGCAAGATACCCCAATGGA...GAGCCCAGCATCCTGGGGATCCAGCGGATGGACAGCTTGGCTCTCCCAGAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564994.5
CDS-3UTR CCA 90 bp TCTGCGAATGGGGCCAATGGCACTCACTGTCTCTTCAGGCCCCCACGGACGGCAACCAGAATCTTAAACTaGGAAACCACATGGATCTGC +
Preference number: 4 (lower is better)
Translates to: SANGANGTHCLFRPPRTATRILN*ETTWIC
Trigger: GCAGATCCATGTGGTTTCCCAGTTTAAGATTCTGGT...TGCCGTCCGTGGGGGCCTGAAGAGACAGTGAGTGCCATTGGCCCCATTCGCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR CCA 90 bp TGTCTCTTCAGGCCCCCACGGACGGCATGCCTGGGGAAGCCTAGTCTACTTACCTGCAATTCAATGCTTTaGACCAGAAGCCTCGGTTCA +
Preference number: 4 (lower is better)
Translates to: CLFRPPRTACLGKPSLLTCNSML*TRSLGS
Trigger: TGAACCGAGGCTTCTGGTCCAAAGCATTGAATTGCA...GGTAAGTAGACTAGGCTTCCCCAGGCATGCCGTCCGTGGGGGCCTGAAGAGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR CCA 90 bp CAGCACGCCATTGTCAGTTCCAGGTCCACTCATCCCCTGCGTGTTGCCGGGACCTCAAACTGCTTGTCCTaGAGAAGTTGTTGGATTTGG +
Preference number: 4 (lower is better)
Translates to: QHAIVSSRSTHPLRVAGTSNCLS*RSCWIW
Trigger: CCAAATCCAACAACTTCTCCAGGACAAGCAGTTTGA...GGTCCCGGCAACACGCAGGGGATGAGTGGACCTGGAACTGACAATGGCGTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR CCA 90 bp TCCCAGAGTCAGGGAAGTGGGAGAGAAAGCCTGGGTAGGGCAGTGAGGGAAGTGATGCACTTCACCTGCTaGTGTAAAATCCGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: SQSQGSGRESLGRAVREVMHFTC*CKIRSS
Trigger: GGAAGAGCGGATTTTACACCAGCAGGTGAAGTGCAT...CACTTCCCTCACTGCCCTACCCAGGCTTTCTCTCCCACTTCCCTGACTCTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR CCA 90 bp CTGGATCCCCAGGATGCTGGGCTCAAGTGTCAGCTGGGTTTACCTCTTTGGAACCCAGTAATGTCCAAATaGGGAGCCTTGTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: LDPQDAGLKCQLGLPLWNPVMSK*GALWWW
Trigger: CCACCACCACAAGGCTCCCCATTTGGACATTACTGG...GTTCCAAAGAGGTAAACCCAGCTGACACTTGAGCCCAGCATCCTGGGGATCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564994.5
CDS-3UTR TCA 90 bp CCTTCACCTCTCTGGGAGAGCCAAGCTGTCCATCCGCTGGATCCCCAGGATGCTAAATCTCCAAGAACATaGGGAGCTTTTGCCGGTATT +
Preference number: 4 (lower is better)
Translates to: PSPLWESQAVHPLDPQDAKSPRT*GAFAGI
Trigger: AATACCGGCAAAAGCTCCTCATGTTCTTGGAGATTT...AGCATCCTGGGGATCCAGCGGATGGACAGCTTGGCTCTCCCAGAGAGGTGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR TCA 90 bp GATGGTGCACATCCTCCTGACCAAGCAGGTACTGAATTCTCTGGAATTGCCCACCCAGTAGTTCCAGCTTaGTTGGCCCCAGGCAGTGAA +
Preference number: 4 (lower is better)
Translates to: DGAHPPDQAGTEFSGIAHPVVPA*LAPGSE
Trigger: TTCACTGCCTGGGGCCAATCAAGCTGGAACTACTGG...GTGGGCAATTCCAGAGAATTCAGTACCTGCTTGGTCAGGAGGATGTGCACCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR TCA 90 bp TGCCGGGACCCACCTTCCTGCGCTATCCCAGCACAACTCTCCAACCACACCATTGCTGAGCGGTCCTTGTaGAGTCATGTACTTAATAGA +
Preference number: 4 (lower is better)
Translates to: CRDPPSCAIPAQLSNHTIAERSL*SHVLNR
Trigger: TCTATTAAGTACATGACTTCACAAGGACCGCTCAGC...AATGGTGTGGTTGGAGAGTTGTGCTGGGATAGCGCAGGAAGGTGGGTCCCGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR GCA 90 bp TCCCAGAGTCAGGGAAGTGGGAGAGAAAGCCTGGGTAGGGCAGTGAGGGAAGTGAATGCAGGTTTTCTGTaGCCAGATGCTGCAGATACT +
Preference number: 4 (lower is better)
Translates to: SQSQGSGRESLGRAVREVNAGFL*PDAADT
Trigger: AGTATCTGCAGCATCTGGGCACAGAAAACCTGCATT...CACTTCCCTCACTGCCCTACCCAGGCTTTCTCTCCCACTTCCCTGACTCTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR GCA 90 bp AAGATGGTGCACATCCTCCTGACCAAGCAGGTACTGAATTCTCTGGAATTGCCCGCTGGATCCCCAGGATaGTGGGCTCAAGTGTCAGCT +
Preference number: 4 (lower is better)
Translates to: KMVHILLTKQVLNSLELPAGSPG*WAQVSA
Trigger: AGCTGACACTTGAGCCCAGCATCCTGGGGATCCAGC...GGGCAATTCCAGAGAATTCAGTACCTGCTTGGTCAGGAGGATGTGCACCATCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318006.10
ENST00000564994.5
CDS-3UTR GCA 90 bp ACAGGGCGGCTACCGAGGGGTGCAGGGCACAGTTACCATGGAGACGTAAAACACAGAACTGAGACCCCTTaGTTCTCATCTTACCTTGCT +
Preference number: 4 (lower is better)
Translates to: TGRLPRGAGHSYHGDVKHRTETP*FSSYLA
Trigger: AGCAAGGTAAGATGAGAAGCAAGGGGTCTCAGTTCT...GTGTTTTACGTCTCCATGGTAACTGTGCCCTGCACCCCTCGGTAGCCGCCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR CCA 90 bp TGCCGGGACCCACCTTCCTGCGCTATCCCAGCACAACTCTCCAACCACACCATTTCATCAAAACGCTTCTaGCAGAAGAGGTTGAAGGCA +
Preference number: 4 (lower is better)
Translates to: CRDPPSCAIPAQLSNHTISSKRF*QKRLKA
Trigger: TGCCTTCAACCTCTTCTGCCAGAAGCGTTTTGATGA...AATGGTGTGGTTGGAGAGTTGTGCTGGGATAGCGCAGGAAGGTGGGTCCCGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR CCA 90 bp CACAGGTTTGGCGGTGAGTTATTTTTAAACCAGCGTCCTGCTGTTCTTGCCCCCTGCACTGTCCTCTCGTaGCCTTTCAGAGGGGAGTTG +
Preference number: 4 (lower is better)
Translates to: HRFGGELFLNQRPAVLAPCTVLS*PFRGEL
Trigger: CAACTCCCCTCTGAAAGGCCACGAGAGGACAGTGCA...GGGGGCAAGAACAGCAGGACGCTGGTTTAAAAATAACTCACCGCCAAACCTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR CCA 90 bp CACAGGTTTGGCGGTGAGTTATTTTTAAACCAGCGTCCTGCTGTTCTTGCCCCCGTGTCCAGTTTGCTGTaGTGTAGCTCGAGGACCTGC +
Preference number: 4 (lower is better)
Translates to: HRFGGELFLNQRPAVLAPVSSLL*CSSRTC
Trigger: GCAGGTCCTCGAGCTACACCACAGCAAACTGGACAC...GGGGGCAAGAACAGCAGGACGCTGGTTTAAAAATAACTCACCGCCAAACCTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR CCA 90 bp AAGATGGTGCACATCCTCCTGACCAAGCAGGTACTGAATTCTCTGGAATTGCCCGGAGCCTTGTGGTGGTaGCAGCCAGGATTCCTAAGG +
Preference number: 4 (lower is better)
Translates to: KMVHILLTKQVLNSLELPGALWW*QPGFLR
Trigger: CCTTAGGAATCCTGGCTGCCACCACCACAAGGCTCC...GGGCAATTCCAGAGAATTCAGTACCTGCTTGGTCAGGAGGATGTGCACCATCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318006.10
ENST00000564994.5
CDS-3UTR TCA 90 bp GCTACCGAGGGGTGCAGGGCACAGTTACCATGGAGACGTAAAACACTACACAGAGCAGGGTGGTGTCGATaGTTTGTAGCAGCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: ATEGCRAQLPWRRKTLHRAGWCR*FVAASS
Trigger: AGAAGAAGCTGCTACAAATCATCGACACCACCCTGC...TCTGTGTAGTGTTTTACGTCTCCATGGTAACTGTGCCCTGCACCCCTCGGTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR TCA 90 bp CACAGGTTTGGCGGTGAGTTATTTTTAAACCAGCGTCCTGCTGTTCTTGCCCCCATGCGGCCAGAAGCTTaGGTGCTGTTCTCTCATGGA +
Preference number: 4 (lower is better)
Translates to: HRFGGELFLNQRPAVLAPMRPEA*VLFSHG
Trigger: TCCATGAGAGAACAGCACTCAAGCTTCTGGCCGCAT...GGGGGCAAGAACAGCAGGACGCTGGTTTAAAAATAACTCACCGCCAAACCTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR TCA 90 bp GTTGAGGGAAGGAAGAATGGAGCTTGGGAGCATGGGATCATGTATGTATACCAGCTAAGCCAGCCTGCCTaGGTGTCTGGTGAGCGAAGA +
Preference number: 4 (lower is better)
Translates to: VEGRKNGAWEHGIMYVYQLSQPA*VSGERR
Trigger: TCTTCGCTCACCAGACACTCAGGCAGGCTGGCTTAG...CTGGTATACATACATGATCCCATGCTCCCAAGCTCCATTCTTCCTTCCCTCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR GCA 90 bp TGCCGGGACCCACCTTCCTGCGCTATCCCAGCACAACTCTCCAACCACACCATTAGAGCCAATTCAAACTaGTTGTCCTGGAGAAGTTGT +
Preference number: 4 (lower is better)
Translates to: CRDPPSCAIPAQLSNHTIRANSN*LSWRSC
Trigger: ACAACTTCTCCAGGACAAGCAGTTTGAATTGGCTCT...AATGGTGTGGTTGGAGAGTTGTGCTGGGATAGCGCAGGAAGGTGGGTCCCGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR GCA 90 bp CACAGGTTTGGCGGTGAGTTATTTTTAAACCAGCGTCCTGCTGTTCTTGCCCCCGACTGGGGTTTTGCCTaGAGGGAAGGACAGGAGATA +
Preference number: 4 (lower is better)
Translates to: HRFGGELFLNQRPAVLAPDWGFA*REGQEI
Trigger: TATCTCCTGTCCTTCCCTGCAGGCAAAACCCCAGTC...GGGGGCAAGAACAGCAGGACGCTGGTTTAAAAATAACTCACCGCCAAACCTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR CCA 90 bp AAGATGGTGCACATCCTCCTGACCAAGCAGGTACTGAATTCTCTGGAATTGCCCGAGCGGCCTGGAGGTTaGCTTTTGGCTCCAGTAGTT +
Preference number: 4 (lower is better)
Translates to: KMVHILLTKQVLNSLELPERPGG*LLAPVV
Trigger: AACTACTGGAGCCAAAAGCCAACCTCCAGGCCGCTC...GGGCAATTCCAGAGAATTCAGTACCTGCTTGGTCAGGAGGATGTGCACCATCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR CCA 90 bp ACAGGGCGGCTACCGAGGGGTGCAGGGCACAGTTACCATGGAGACGTAAAACACATCTGTCACACAGCATaGAGCCATAGTTTACAAAGG +
Preference number: 4 (lower is better)
Translates to: TGRLPRGAGHSYHGDVKHICHTA*SHSLQR
Trigger: CCTTTGTAAACTATGGCTCCATGCTGTGTGACAGAT...GTGTTTTACGTCTCCATGGTAACTGTGCCCTGCACCCCTCGGTAGCCGCCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR TCA 90 bp GATGGTGCACATCCTCCTGACCAAGCAGGTACTGAATTCTCTGGAATTGCCCACTCCCCCTGCAATTCATaGAATTCCCTGTCCTTCCAG +
Preference number: 4 (lower is better)
Translates to: DGAHPPDQAGTEFSGIAHSPCNS*NSLSFQ
Trigger: CTGGAAGGACAGGGAATTTCATGAATTGCAGGGGGA...GTGGGCAATTCCAGAGAATTCAGTACCTGCTTGGTCAGGAGGATGTGCACCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR CCA 90 bp CAGGTGCTCCTTCACCTCTCTGGGAGAGCCAAGCTGTCCATCCGCTGGATCCCCTGGAGAAGTTCTTATTaGATTTCTCTAGTGTCACTT +
Preference number: 4 (lower is better)
Translates to: QVLLHLSGRAKLSIRWIPWRSSY*ISLVSL
Trigger: AAGTGACACTAGAGAAATCCAATAAGAACTTCTCCA...GGGGATCCAGCGGATGGACAGCTTGGCTCTCCCAGAGAGGTGAAGGAGCACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR CCA 90 bp AAAAGCTGGCAATGCCAGACCATGAGTCTAATTAATTCAGAGTTGTTCCAGGGCAAGCTGTCCATCCGCTaGATCCCCAGGATGCTGGGC +
Preference number: 4 (lower is better)
Translates to: KSWQCQTMSLINSELFQGKLSIR*IPRMLG
Trigger: GCCCAGCATCCTGGGGATCCAGCGGATGGACAGCTT...GCCCTGGAACAACTCTGAATTAATTAGACTCATGGTCTGGCATTGCCAGCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318006.10
ENST00000564994.5
CDS-3UTR CCA 90 bp TTCAGAGTTGTTCCAGGGCACAAGATAGCCAGTAATGTCCAAATGGGGAGCCTTCACGGACGGCATGCCTaGGGAAGCCTAGTCTACTTA +
Preference number: 4 (lower is better)
Translates to: FRVVPGHKIASNVQMGSLHGRHA*GSLVYL
Trigger: TAAGTAGACTAGGCTTCCCCAGGCATGCCGTCCGTG...AAGGCTCCCCATTTGGACATTACTGGCTATCTTGTGCCCTGGAACAACTCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR TCA 90 bp AAGATGGTGCACATCCTCCTGACCAAGCAGGTACTGAATTCTCTGGAATTGCCCAGGGAAAATCACAGATaGGCCGGCCTGGATCATAGT +
Preference number: 4 (lower is better)
Translates to: KMVHILLTKQVLNSLELPRENHR*AGLDHS
Trigger: ACTATGATCCAGGCCGGCTCATCTGTGATTTTCCCT...GGGCAATTCCAGAGAATTCAGTACCTGCTTGGTCAGGAGGATGTGCACCATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR TCA 90 bp AAAAGCTGGCAATGCCAGACCATGAGTCTAATTAATTCAGAGTTGTTCCAGGGCCATGGAACTCTCCAGTaGGCCATGCTGAGCGGTCCT +
Preference number: 4 (lower is better)
Translates to: KSWQCQTMSLINSELFQGHGTLQ*AMLSGP
Trigger: AGGACCGCTCAGCATGGCTCACTGGAGAGTTCCATG...GCCCTGGAACAACTCTGAATTAATTAGACTCATGGTCTGGCATTGCCAGCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR TCA 90 bp ACAGGGCGGCTACCGAGGGGTGCAGGGCACAGTTACCATGGAGACGTAAAACACTTCAAAGACAGTTTGTaGGAATGGAAGATAACAAGC +
Preference number: 4 (lower is better)
Translates to: TGRLPRGAGHSYHGDVKHFKDSL*EWKITS
Trigger: GCTTGTTATCTTCCATTCTCACAAACTGTCTTTGAA...GTGTTTTACGTCTCCATGGTAACTGTGCCCTGCACCCCTCGGTAGCCGCCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR GCA 90 bp TTACCTCTTTGGAACAGAAGTAATGGACGACCACTCCATTGGGGTATCTTGCAAGCTGGATCCCCAGGATaGTGGGCTCAAGTGTCAGCT +
Preference number: 4 (lower is better)
Translates to: LPLWNRSNGRPLHWGILQAGSPG*WAQVSA
Trigger: AGCTGACACTTGAGCCCAGCATCCTGGGGATCCAGC...TTGCAAGATACCCCAATGGAGTGGTCGTCCATTACTTCTGTTCCAAAGAGGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564994.5
CDS-3UTR GCA 90 bp AAAAGCTGGCAATGCCAGACCATGAGTCTAATTAATTCAGAGTTGTTCCAGGGCCCAGAGCTTCCCTGCTaGTCCTGGAGGAAGCAGAGT +
Preference number: 4 (lower is better)
Translates to: KSWQCQTMSLINSELFQGPELPC*SWRKQS
Trigger: ACTCTGCTTCCTCCAGGAGCAGCAGGGAAGCTCTGG...GCCCTGGAACAACTCTGAATTAATTAGACTCATGGTCTGGCATTGCCAGCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR CCA 90 bp GGGTATCTTGCAAATGCACATACATTGCAGGTCTTTAAATTCTCGAAGCCCACTGGATCCCCAGGATGCTaGGCTCAAGTGTCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: GYLANAHTLQVFKFSKPTGSPGC*AQVSAG
Trigger: CCCAGCTGACACTTGAGCCCAGCATCCTGGGGATCC...AGTGGGCTTCGAGAATTTAAAGACCTGCAATGTATGTGCATTTGCAAGATACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564994.5
CDS-3UTR CCA 90 bp TGGGGTATCTTGCAAATGCACATACATTGCAGGTCTTTAAATTCTCGAAGCCCAAAGCTGTCCATCCGCTaGATCCCCAGGATGCTGGGC +
Preference number: 4 (lower is better)
Translates to: WGILQMHIHCRSLNSRSPKLSIR*IPRMLG
Trigger: GCCCAGCATCCTGGGGATCCAGCGGATGGACAGCTT...TGGGCTTCGAGAATTTAAAGACCTGCAATGTATGTGCATTTGCAAGATACCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564994.5
CDS-3UTR CCA 90 bp TTCAGAGTTGTTCCAGGGCACAAGATAGCCAGTAATGTCCAAATGGGGAGCCTTCCAGTAATGTCCAAATaGGGAGCCTTGTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: FRVVPGHKIASNVQMGSLPVMSK*GALWWW
Trigger: CCACCACCACAAGGCTCCCCATTTGGACATTACTGG...AAGGCTCCCCATTTGGACATTACTGGCTATCTTGTGCCCTGGAACAACTCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318006.10
ENST00000564994.5
CDS-3UTR CCA 90 bp GCTACCGAGGGGTGCAGGGCACAGTTACCATGGAGACGTAAAACACTACACAGAAGGGCACAGTTACCATaGAGACGTAAAACACTACAC +
Preference number: 4 (lower is better)
Translates to: ATEGCRAQLPWRRKTLHRRAQLP*RRKTLH
Trigger: GTGTAGTGTTTTACGTCTCCATGGTAACTGTGCCCT...TCTGTGTAGTGTTTTACGTCTCCATGGTAACTGTGCCCTGCACCCCTCGGTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR TCA 90 bp TTCAGAGTTGTTCCAGGGCACAAGATAGCCAGTAATGTCCAAATGGGGAGCCTTGAGGTGCTTGACTGGTaGTCAGAGTCATTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: FRVVPGHKIASNVQMGSLEVLDW*SESFSF
Trigger: GAAGCTGAATGACTCTGATCACCAGTCAAGCACCTC...AAGGCTCCCCATTTGGACATTACTGGCTATCTTGTGCCCTGGAACAACTCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR GCA 90 bp AAGATGGTGCACATCCTCCTGACCAAGCAGGTACTGAATTCTCTGGAATTGCCCATATCGAGGCAACACTaGAATGATGTAGGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: KMVHILLTKQVLNSLELPISRQH*NDVGRL
Trigger: CAGCCTCCCTACATCATTGCAGTGTTGCCTCGATAT...GGGCAATTCCAGAGAATTCAGTACCTGCTTGGTCAGGAGGATGTGCACCATCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR CCA 90 bp CACAGGTTTGGCGGTGAGTTATTTTTAAACCAGCGTCCTGCTGTTCTTGCCCCCCTCAGGAATTCTGCATaGAGAAGGTTCTTGAGCACT +
Preference number: 4 (lower is better)
Translates to: HRFGGELFLNQRPAVLAPLRNSA*RRFLST
Trigger: AGTGCTCAAGAACCTTCTCCATGCAGAATTCCTGAG...GGGGGCAAGAACAGCAGGACGCTGGTTTAAAAATAACTCACCGCCAAACCTGTG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR CCA 90 bp AAGATGGTGCACATCCTCCTGACCAAGCAGGTACTGAATTCTCTGGAATTGCCCAAAATCCGCTCTTCCTaGACCCTCAGGAATTCTGCA +
Preference number: 4 (lower is better)
Translates to: KMVHILLTKQVLNSLELPKIRSS*TLRNSA
Trigger: TGCAGAATTCCTGAGGGTCCAGGAAGAGCGGATTTT...GGGCAATTCCAGAGAATTCAGTACCTGCTTGGTCAGGAGGATGTGCACCATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318006.10
ENST00000564994.5
CDS-3UTR CCA 90 bp AATTCTCGAAGCCCACTCCCAACAGATAGAACAGGCTGCTCTCTGAAGGCTCAAATGCACTTCACCTGCTaGTGTAAAATCCGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: NSRSPLPTDRTGCSLKAQMHFTC*CKIRSS
Trigger: GGAAGAGCGGATTTTACACCAGCAGGTGAAGTGCAT...TTGAGCCTTCAGAGAGCAGCCTGTTCTATCTGTTGGGAGTGGGCTTCGAGAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564994.5
CDS-3UTR CCA 90 bp TTGGGGTATCTTGCAAATGCACATACATTGCAGGTCTTTAAATTCTCGAAGCCCGGAGCCTTGTGGTGGTaGCAGCCAGGATTCCTAAGG +
Preference number: 4 (lower is better)
Translates to: LGYLANAHTLQVFKFSKPGALWW*QPGFLR
Trigger: CCTTAGGAATCCTGGCTGCCACCACCACAAGGCTCC...GGGCTTCGAGAATTTAAAGACCTGCAATGTATGTGCATTTGCAAGATACCCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564994.5
CDS-3UTR CCA 90 bp GTGTGCAAAGGCAAGATGGTGCACATCCTCCTGACCAAGCAGGTACTGAATTCTCACCATCAAAGACACTaGTGCAGTGAGACTTCGAGT +
Preference number: 4 (lower is better)
Translates to: VCKGKMVHILLTKQVLNSHHQRH*CSETSS
Trigger: ACTCGAAGTCTCACTGCACCAGTGTCTTTGATGGTG...AGAATTCAGTACCTGCTTGGTCAGGAGGATGTGCACCATCTTGCCTTTGCACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR CCA 90 bp GGAGCTTGGGAGCATGGGATCATGTATGTATACCAGGAAAGAAAACACACATTCTCCCACATCTGCGAATaGGGCCAATGGCACTCACTG +
Preference number: 4 (lower is better)
Translates to: GAWEHGIMYVYQERKHTFSHICE*GQWHSL
Trigger: CAGTGAGTGCCATTGGCCCCATTCGCAGATGTGGGA...GAATGTGTGTTTTCTTTCCTGGTATACATACATGATCCCATGCTCCCAAGCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
3UTR CAA 72 bp TGCCTGGGGAAGCCTAGTCTACTTACCATCAGCACGTaGATCTGTCACACAGCATGGAGCCATAGTTTACAA +
Preference number: 4 (lower is better)
Translates to: CLGKPSLLTIST*ICHTAWSHSLQ
Trigger: TTGTAAACTATGGCTCCATGCTGTGTGACAGATCAACGTGCTGATGGTAAGTAGACTAGGCTTCCCCAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR TCA 90 bp TTCAGAGTTGTTCCAGGGCACAAGATAGCCAGTAATGTCCAAATGGGGAGCCTTTTGGAAAGAGCTCTTTaGTGGACCCCTTTCCATCCA +
Preference number: 4 (lower is better)
Translates to: FRVVPGHKIASNVQMGSLLERAL*WTPFHP
Trigger: TGGATGGAAAGGGGTCCATCAAAGAGCTCTTTCCAA...AAGGCTCCCCATTTGGACATTACTGGCTATCTTGTGCCCTGGAACAACTCTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR TCA 90 bp GTTGAGGGAAGGAAGAATGGAGCTTGGGAGCATGGGATCATGTATGTATACCAGTCAATCAGAGCTAAGTaGGCCTTCTCCAATTCAGCC +
Preference number: 4 (lower is better)
Translates to: VEGRKNGAWEHGIMYVYQSIRAK*AFSNSA
Trigger: GGCTGAATTGGAGAAGGCTCACTTAGCTCTGATTGA...CTGGTATACATACATGATCCCATGCTCCCAAGCTCCATTCTTCCTTCCCTCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR GCA 90 bp TTCAGAGTTGTTCCAGGGCACAAGATAGCCAGTAATGTCCAAATGGGGAGCCTTCATCAAAGACACTGGTaGAGTGAGACTTCGAGTCTG +
Preference number: 4 (lower is better)
Translates to: FRVVPGHKIASNVQMGSLHQRHW*SETSSL
Trigger: CAGACTCGAAGTCTCACTGCACCAGTGTCTTTGATG...AAGGCTCCCCATTTGGACATTACTGGCTATCTTGTGCCCTGGAACAACTCTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR CCA 90 bp GGAGCTTGGGAGCATGGGATCATGTATGTATACCAGGAAAGAAAACACACATTCTTGGCTTTCTTGGACTaGTCCACGAGCACCTGCAGA +
Preference number: 4 (lower is better)
Translates to: GAWEHGIMYVYQERKHTFLAFLD*STSTCR
Trigger: TCTGCAGGTGCTCGTGGACCAGTCCAAGAAAGCCAA...GAATGTGTGTTTTCTTTCCTGGTATACATACATGATCCCATGCTCCCAAGCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR CCA 90 bp TGGGGTATCTTGCAAATGCACATACATTGCAGGTCTTTAAATTCTCGAAGCCCAGCTCCTTCACCTCTCTaGGAGAGCCAAGCTGTCCAT +
Preference number: 4 (lower is better)
Translates to: WGILQMHIHCRSLNSRSPAPSPL*ESQAVH
Trigger: ATGGACAGCTTGGCTCTCCCAGAGAGGTGAAGGAGC...TGGGCTTCGAGAATTTAAAGACCTGCAATGTATGTGCATTTGCAAGATACCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564994.5
CDS-3UTR CCA 90 bp GGAGCTTGGGAGCATGGGATCATGTATGTATACCAGGAAAGAAAACACACATTCTGCGAATGGGGCCAATaGCACTCACTGTCTCTTCAG +
Preference number: 4 (lower is better)
Translates to: GAWEHGIMYVYQERKHTFCEWGQ*HSLSLQ
Trigger: CTGAAGAGACAGTGAGTGCCATTGGCCCCATTCGCA...GAATGTGTGTTTTCTTTCCTGGTATACATACATGATCCCATGCTCCCAAGCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR TCA 90 bp AAGATGGTGCACATCCTCCTGACCAAGCAGGTACTGAATTCTCTGGAATTGCCCACCACATGGATCTGCTaGATCTTTTTGGAGAAGTTC +
Preference number: 4 (lower is better)
Translates to: KMVHILLTKQVLNSLELPTTWIC*IFLEKF
Trigger: GAACTTCTCCAAAAAGATTCAGCAGATCCATGTGGT...GGGCAATTCCAGAGAATTCAGTACCTGCTTGGTCAGGAGGATGTGCACCATCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR GCA 90 bp TTCAGAGTTGTTCCAGGGCACAAGATAGCCAGTAATGTCCAAATGGGGAGCCTTTTCATTTCTGCGAGCTaGAGAGCCAATTCAAACTGC +
Preference number: 4 (lower is better)
Translates to: FRVVPGHKIASNVQMGSLFISAS*RANSNC
Trigger: GCAGTTTGAATTGGCTCTGCAGCTCGCAGAAATGAA...AAGGCTCCCCATTTGGACATTACTGGCTATCTTGTGCCCTGGAACAACTCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR GCA 90 bp AATTCTCGAAGCCCACTCCCAACAGATAGAACAGGCTGCTCTCTGAAGGCTCAAGGGGTATCTTGCAAATaGACATACATTGCAGGTCTT +
Preference number: 4 (lower is better)
Translates to: NSRSPLPTDRTGCSLKAQGVSCK*TYIAGL
Trigger: AAGACCTGCAATGTATGTGCATTTGCAAGATACCCC...TTGAGCCTTCAGAGAGCAGCCTGTTCTATCTGTTGGGAGTGGGCTTCGAGAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564994.5
CDS-3UTR CCA 90 bp GTGTGCAAAGGCAAGATGGTGCACATCCTCCTGACCAAGCAGGTACTGAATTCTCTGGGTTTACCTCTTTaGAACAGAAGTAATGGACGA +
Preference number: 4 (lower is better)
Translates to: VCKGKMVHILLTKQVLNSLGLPL*NRSNGR
Trigger: TCGTCCATTACTTCTGTTCCAAAGAGGTAAACCCAG...AGAATTCAGTACCTGCTTGGTCAGGAGGATGTGCACCATCTTGCCTTTGCACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318006.10
ENST00000564994.5
CDS-3UTR CCA 90 bp AAGATGGTGCACATCCTCCTGACCAAGCAGGTACTGAATTCTCTGGAATTGCCCTTCCCATTAAAAAGCTaGCAATGCCAGACCATGAGT +
Preference number: 4 (lower is better)
Translates to: KMVHILLTKQVLNSLELPFPLKS*QCQTMS
Trigger: ACTCATGGTCTGGCATTGCCAGCTTTTTAATGGGAA...GGGCAATTCCAGAGAATTCAGTACCTGCTTGGTCAGGAGGATGTGCACCATCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318006.10
ENST00000564994.5
CDS-3UTR CCA 90 bp GGAGCTTGGGAGCATGGGATCATGTATGTATACCAGGAAAGAAAACACACATTCGAGCAGGCACCTCTGTaGGAACATGTATCTAGGGAT +
Preference number: 4 (lower is better)
Translates to: GAWEHGIMYVYQERKHTFEQAPL*EHVSRD
Trigger: ATCCCTAGATACATGTTCCCACAGAGGTGCCTGCTC...GAATGTGTGTTTTCTTTCCTGGTATACATACATGATCCCATGCTCCCAAGCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR CCA 90 bp CACAGGTTTGGCGGTGAGTTATTTTTAAACCAGCGTCCTGCTGTTCTTGCCCCCTGTAAGGCAAGTGAATaGAAACTGGCTGGAAAAAGA +
Preference number: 4 (lower is better)
Translates to: HRFGGELFLNQRPAVLAPCKASE*KLAGKR
Trigger: TCTTTTTCCAGCCAGTTTCCATTCACTTGCCTTACA...GGGGGCAAGAACAGCAGGACGCTGGTTTAAAAATAACTCACCGCCAAACCTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR GCA 90 bp AGTGTCAGCTGGGTTTACCTCTTTGGAACAGAAGTAATGGACGACCACTCCATTATGATGCACTTCACCTaGTGGTGTAAAATCCGCTCT +
Preference number: 4 (lower is better)
Translates to: SVSWVYLFGTEVMDDHSIMMHFT*WCKIRS
Trigger: AGAGCGGATTTTACACCAGCAGGTGAAGTGCATCAT...AATGGAGTGGTCGTCCATTACTTCTGTTCCAAAGAGGTAAACCCAGCTGACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564994.5
CDS-3UTR GCA 90 bp TTCAGAGTTGTTCCAGGGCACAAGATAGCCAGTAATGTCCAAATGGGGAGCCTTTCCATTGGGGTATCTTaGAAATGCACTGTTCCCAAT +
Preference number: 4 (lower is better)
Translates to: FRVVPGHKIASNVQMGSLSIGVS*KCTVPN
Trigger: ATTGGGAACAGTGCATTTGCAAGATACCCCAATGGA...AAGGCTCCCCATTTGGACATTACTGGCTATCTTGTGCCCTGGAACAACTCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR GCA 90 bp CACAGGTTTGGCGGTGAGTTATTTTTAAACCAGCGTCCTGCTGTTCTTGCCCCCTTAAAAAGCTGGCAATaGCAGACCATGAGTCTAATT +
Preference number: 4 (lower is better)
Translates to: HRFGGELFLNQRPAVLAPLKSWQ*QTMSLI
Trigger: AATTAGACTCATGGTCTGGCATTGCCAGCTTTTTAA...GGGGGCAAGAACAGCAGGACGCTGGTTTAAAAATAACTCACCGCCAAACCTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR CCA 90 bp TGGGGTATCTTGCAAATGCACATACATTGCAGGTCTTTAAATTCTCGAAGCCCAGGACGACCACTCCATTaGGGTATCTTGCAAATGCAC +
Preference number: 4 (lower is better)
Translates to: WGILQMHIHCRSLNSRSPGRPLH*GILQMH
Trigger: GTGCATTTGCAAGATACCCCAATGGAGTGGTCGTCC...TGGGCTTCGAGAATTTAAAGACCTGCAATGTATGTGCATTTGCAAGATACCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564994.5
CDS-3UTR TCA 90 bp AAAAGCTGGCAATGCCAGACCATGAGTCTAATTAATTCAGAGTTGTTCCAGGGCAGATGCGTATGTCATTaGTCTGAGTGTTTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: KSWQCQTMSLINSELFQGRCVCH*SECLLA
Trigger: TGCCAGCAAACACTCAGATCAATGACATACGCATCT...GCCCTGGAACAACTCTGAATTAATTAGACTCATGGTCTGGCATTGCCAGCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR TCA 90 bp AAAAGCTGGCAATGCCAGACCATGAGTCTAATTAATTCAGAGTTGTTCCAGGGCGAAAGAAAAGGAGACTaGAAACTAACAGGGCGGCTA +
Preference number: 4 (lower is better)
Translates to: KSWQCQTMSLINSELFQGERKGD*KLTGRL
Trigger: TAGCCGCCCTGTTAGTTTTCAGTCTCCTTTTCTTTC...GCCCTGGAACAACTCTGAATTAATTAGACTCATGGTCTGGCATTGCCAGCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR GCA 90 bp GTCAGCTGGGTTTACCTCTTTGGAACAGAAGTAATGGACGACCACTCCATTGGGTTAAAAAGCTGGCAATaGCAGACCATGAGTCTAATT +
Preference number: 4 (lower is better)
Translates to: VSWVYLFGTEVMDDHSIGLKSWQ*QTMSLI
Trigger: AATTAGACTCATGGTCTGGCATTGCCAGCTTTTTAA...CCCAATGGAGTGGTCGTCCATTACTTCTGTTCCAAAGAGGTAAACCCAGCTGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564994.5
CDS-3UTR CCA 90 bp GGAGCTTGGGAGCATGGGATCATGTATGTATACCAGGAAAGAAAACACACATTCTTCTCACAGTATAGCTaGATCAGGCAGTTGTGGAAC +
Preference number: 4 (lower is better)
Translates to: GAWEHGIMYVYQERKHTFFSQYS*IRQLWN
Trigger: GTTCCACAACTGCCTGATCCAGCTATACTGTGAGAA...GAATGTGTGTTTTCTTTCCTGGTATACATACATGATCCCATGCTCCCAAGCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR CCA 90 bp GGAGCTTGGGAGCATGGGATCATGTATGTATACCAGGAAAGAAAACACACATTCAGGAAGAATGGAGCTTaGGAGCATGGGATCATGTAT +
Preference number: 4 (lower is better)
Translates to: GAWEHGIMYVYQERKHTFRKNGA*EHGIMY
Trigger: ATACATGATCCCATGCTCCCAAGCTCCATTCTTCCT...GAATGTGTGTTTTCTTTCCTGGTATACATACATGATCCCATGCTCCCAAGCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR CCA 90 bp GGAGCTTGGGAGCATGGGATCATGTATGTATACCAGGAAAGAAAACACACATTCGAAGATGTCCTTGTTTaGTTCCCACAAGAAGCCATT +
Preference number: 4 (lower is better)
Translates to: GAWEHGIMYVYQERKHTFEDVLV*FPQEAI
Trigger: AATGGCTTCTTGTGGGAACCAAACAAGGACATCTTC...GAATGTGTGTTTTCTTTCCTGGTATACATACATGATCCCATGCTCCCAAGCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR CCA 90 bp GGTATCTTGCAAATGCACATACATTGCAGGTCTTTAAATTCTCGAAGCCCACTCTTCCCATTAAAAAGCTaGCAATGCCAGACCATGAGT +
Preference number: 4 (lower is better)
Translates to: GILQMHIHCRSLNSRSPLFPLKS*QCQTMS
Trigger: ACTCATGGTCTGGCATTGCCAGCTTTTTAATGGGAA...GAGTGGGCTTCGAGAATTTAAAGACCTGCAATGTATGTGCATTTGCAAGATACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564994.5
CDS-3UTR TCA 90 bp AAAAGCTGGCAATGCCAGACCATGAGTCTAATTAATTCAGAGTTGTTCCAGGGCAGGCATACAAGTTCTTaGTGTGATGAATTTGTTGCT +
Preference number: 4 (lower is better)
Translates to: KSWQCQTMSLINSELFQGRHTSS*CDEFVA
Trigger: AGCAACAAATTCATCACATCAAGAACTTGTATGCCT...GCCCTGGAACAACTCTGAATTAATTAGACTCATGGTCTGGCATTGCCAGCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR GCA 90 bp GGAGCTTGGGAGCATGGGATCATGTATGTATACCAGGAAAGAAAACACACATTCGATACACATCTTTGTTaGCATCTTTGTTTCGGTCAT +
Preference number: 4 (lower is better)
Translates to: GAWEHGIMYVYQERKHTFDTHLC*HLCFGH
Trigger: ATGACCGAAACAAAGATGGCAACAAAGATGTGTATC...GAATGTGTGTTTTCTTTCCTGGTATACATACATGATCCCATGCTCCCAAGCTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS GCA 90 bp TCGGCACTGGCTCGAAAGCGTCGTGCATGGCGGCAAGGGGAGAGTTaGCACCGCCGTCTCGCCCAGAGTGTTCCGGGCCGGGCTGGGGTC +
Preference number: 5 (lower is better)
Translates to: SALARKRRAWRQGES*HRRLAQSVPGRAGV
Trigger: GACCCCAGCCCGGCCCGGAACACTCTGGGCGAGACGGCGGTGGCAACTCTCCCCTTGCCGCCATGCACGACGCTTTCGAGCCAGTGCCGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318006.10
ENST00000568357.1
CDS-3UTR CAA 90 bp TCTGCGAATGGGGCCAATGGCACTCACTGTCTCTTCAGGCCCCCACGGACGGCAGCGGCAAGGGGAGAGTaGCCACCGCCGTCTCGCCCA +
Preference number: 5 (lower is better)
Translates to: SANGANGTHCLFRPPRTAAARGE*PPPSRP
Trigger: TGGGCGAGACGGCGGTGGCAACTCTCCCCTTGCCGC...TGCCGTCCGTGGGGGCCTGAAGAGACAGTGAGTGCCATTGGCCCCATTCGCAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS CCA 90 bp GCACCTGGGCAGAGAATAGGGTGGCCTGCTTACCCCCACCACACGTaGCACCTGGGTCTGTGCTCTCCTCTAAGGCCTGGGGCCAACCGG +
Preference number: 5 (lower is better)
Translates to: APGQRIGWPAYPHHT*HLGLCSPLRPGANR
Trigger: CCGGTTGGCCCCAGGCCTTAGAGGAGAGCACAGACCCAGGTGCCACGTGTGGTGGGGGTAAGCAGGCCACCCTATTCTCTGCCCAGGTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561797.1
ENST00000562258.5
CDS-3UTR CAA 90 bp CTGCAGTCACACTCAGCCCGGCCTGAGGCAAGGGATGCAGGGCCTTGCCTAGGCGCTGGGACTGGGGTTTaGCCTGCAGGGAAGGACAGG +
Preference number: 5 (lower is better)
Translates to: LQSHSARPEARDAGPCLGAGTGV*PAGKDR
Trigger: CCTGTCCTTCCCTGCAGGCAAAACCCCAGTCCCAGC...GCCTAGGCAAGGCCCTGCATCCCTTGCCTCAGGCCGGGCTGAGTGTGACTGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR CAA 90 bp CCCACATCTGCGAATGGGGCCAATGGCACTCACTGTCTCTTCAGGCCCCCACGGCTCATCCCCTGCGTGTaGCCGGGACCCACCTTCCTG +
Preference number: 5 (lower is better)
Translates to: PTSANGANGTHCLFRPPRLIPCV*PGPTFL
Trigger: CAGGAAGGTGGGTCCCGGCAACACGCAGGGGATGAG...CCGTGGGGGCCTGAAGAGACAGTGAGTGCCATTGGCCCCATTCGCAGATGTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS GCA 90 bp TGCAGAGGCAGCTTTTCTAGGATCGGCACTGGCTCGAAAGCGTCGTaGATGGCGGCAAGGGGAGAGTTGCCACCGCCGTCTCGCCCAGAG +
Preference number: 5 (lower is better)
Translates to: CRGSFSRIGTGSKAS*MAARGELPPPSRPE
Trigger: CTCTGGGCGAGACGGCGGTGGCAACTCTCCCCTTGCCGCCATGCACGACGCTTTCGAGCCAGTGCCGATCCTAGAAAAGCTGCCTCTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318006.10
ENST00000568357.1
CDS-3UTR CAA 90 bp ATGGGGCCAATGGCACTCACTGTCTCTTCAGGCCCCCACGGACGGCATGCCTGGGGGGAGTTGGCTTTCTaGGACTGGTCCACGAGCACC +
Preference number: 5 (lower is better)
Translates to: MGPMALTVSSGPHGRHAWGELAF*DWSTST
Trigger: GGTGCTCGTGGACCAGTCCAAGAAAGCCAACTCCCC...CCAGGCATGCCGTCCGTGGGGGCCTGAAGAGACAGTGAGTGCCATTGGCCCCAT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR CAA 90 bp CCTGGAGGAAGCAGAGTCCAAGCTGGCCCAGATGAGGCCCCGGGCAGCACTGCTAGCTGGATCAGGCAGTaGTGGAACCGAGAGCCTGTC +
Preference number: 5 (lower is better)
Translates to: PGGSRVQAGPDEAPGSTASWIRQ*WNREPV
Trigger: GACAGGCTCTCGGTTCCACAACTGCCTGATCCAGCT...AGCAGTGCTGCCCGGGGCCTCATCTGGGCCAGCTTGGACTCTGCTTCCTCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS CCA 90 bp GAGGCAGCTTTTCTAGGATCGGCACTGGCTCGAAAGCGTCGTGCATaGCGGCAAGGGGAGAGTTGCCACCGCCGTCTCGCCCAGAGTGTT +
Preference number: 5 (lower is better)
Translates to: EAAFLGSALARKRRA*RQGESCHRRLAQSV
Trigger: AACACTCTGGGCGAGACGGCGGTGGCAACTCTCCCCTTGCCGCCATGCACGACGCTTTCGAGCCAGTGCCGATCCTAGAAAAGCTGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318006.10
ENST00000568357.1
CDS CCA 90 bp CTGGCTCCTCTTCAGAACTTCTGCGCACCTGGGCAGAGAATAGGGTaGCCTGCTTACCCCCACCACACGTGGCACCTGGGTCTGTGCTCT +
Preference number: 5 (lower is better)
Translates to: LAPLQNFCAPGQRIG*PAYPHHTWHLGLCS
Trigger: AGAGCACAGACCCAGGTGCCACGTGTGGTGGGGGTAAGCAGGCCACCCTATTCTCTGCCCAGGTGCGCAGAAGTTCTGAAGAGGAGCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561797.1
ENST00000562258.5
CDS-3UTR CAA 90 bp CTGCAGTCACACTCAGCCCGGCCTGAGGCAAGGGATGCAGGGCCTTGCCTAGGCGAGAAGTTGTTGGATTaGGGTTGCCATGGGGACAGG +
Preference number: 5 (lower is better)
Translates to: LQSHSARPEARDAGPCLGEKLLD*GCHGDR
Trigger: CCTGTCCCCATGGCAACCCAAATCCAACAACTTCTC...GCCTAGGCAAGGCCCTGCATCCCTTGCCTCAGGCCGGGCTGAGTGTGACTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR CAA 90 bp CAGGTGCTCCTTCACCTCTCTGGGAGAGCCAAGCTGTCCATCCGCTGGATCCCCAGAGCGGCCTGGAGGTaGGCTTTTGGCTCCAGTAGT +
Preference number: 5 (lower is better)
Translates to: QVLLHLSGRAKLSIRWIPRAAWR*AFGSSS
Trigger: ACTACTGGAGCCAAAAGCCAACCTCCAGGCCGCTCT...GGGGATCCAGCGGATGGACAGCTTGGCTCTCCCAGAGAGGTGAAGGAGCACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR CAA 90 bp CAGGTGCTCCTTCACCTCTCTGGGAGAGCCAAGCTGTCCATCCGCTGGATCCCCTTTGCTGGCAGAAGGTaGAGGGCCTTGGTGGTGTCC +
Preference number: 5 (lower is better)
Translates to: QVLLHLSGRAKLSIRWIPFAGRR*RALVVS
Trigger: GGACACCACCAAGGCCCTCAACCTTCTGCCAGCAAA...GGGGATCCAGCGGATGGACAGCTTGGCTCTCCCAGAGAGGTGAAGGAGCACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR CAA 90 bp GGCCCCCACGGACGGCATGCCTGGGGAAGCCTAGTCTACTTACCATCAGCACGTCTTGGCAGCACGCCATaGTCAGTTCCAGGTCCACTC +
Preference number: 5 (lower is better)
Translates to: GPHGRHAWGSLVYLPSARLGSTP*SVPGPL
Trigger: GAGTGGACCTGGAACTGACAATGGCGTGCTGCCAAG...ACGTGCTGATGGTAAGTAGACTAGGCTTCCCCAGGCATGCCGTCCGTGGGGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS GCA 90 bp TCCTCTTCAGAACTTCTGCGCACCTGGGCAGAGAATAGGGTGGCCTaGTTACCCCCACCACACGTGGCACCTGGGTCTGTGCTCTCCTCT +
Preference number: 5 (lower is better)
Translates to: SSSELLRTWAENRVA*LPPPHVAPGSVLSS
Trigger: AGAGGAGAGCACAGACCCAGGTGCCACGTGTGGTGGGGGTAAGCAGGCCACCCTATTCTCTGCCCAGGTGCGCAGAAGTTCTGAAGAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561797.1
ENST00000562258.5
CDS GCA 90 bp CCAGGCTTGTGTCACTTAGCTCCCCTGGCTCCTCTTCAGAACTTCTaGGCACCTGGGCAGAGAATAGGGTGGCCTGCTTACCCCCACCAC +
Preference number: 5 (lower is better)
Translates to: PGLCHLAPLAPLQNF*APGQRIGWPAYPHH
Trigger: GTGGTGGGGGTAAGCAGGCCACCCTATTCTCTGCCCAGGTGCGCAGAAGTTCTGAAGAGGAGCCAGGGGAGCTAAGTGACACAAGCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561797.1
ENST00000562258.5
CDS-3UTR CAA 90 bp GCCATTGTCAGTTCCAGGTCCACTCATCCCCTGCGTGTTGCCGGGACCCACCTTCACCACGCCATGGACTaGGGCACATCTGGCACACTA +
Preference number: 5 (lower is better)
Translates to: AIVSSRSTHPLRVAGTHLHHAMD*GTSGTL
Trigger: TAGTGTGCCAGATGTGCCCAAGTCCATGGCGTGGTG...AAGGTGGGTCCCGGCAACACGCAGGGGATGAGTGGACCTGGAACTGACAATGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR CAA 90 bp TCTGCGAATGGGGCCAATGGCACTCACTGTCTCTTCAGGCCCCCACGGACGGCATTGGTGGTGTCCAGTTaGCTGTGGTGTAGCTCGAGG +
Preference number: 5 (lower is better)
Translates to: SANGANGTHCLFRPPRTALVVSS*LWCSSR
Trigger: CCTCGAGCTACACCACAGCAAACTGGACACCACCAA...TGCCGTCCGTGGGGGCCTGAAGAGACAGTGAGTGCCATTGGCCCCATTCGCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR CAA 90 bp CCCCGCGTCCCCTCTGCTGTGCCTAAACACCTCTCAGGAACACTTGGCAGCACGAGAAGGTTGAGGGCCTaGGTGGTGTCCAGTTTGCTG +
Preference number: 5 (lower is better)
Translates to: PRVPSAVPKHLSGTLGSTRRLRA*VVSSLL
Trigger: CAGCAAACTGGACACCACCAAGGCCCTCAACCTTCT...CGTGCTGCCAAGTGTTCCTGAGAGGTGTTTAGGCACAGCAGAGGGGACGCGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR CAA 90 bp CTGCAGTCACACTCAGCCCGGCCTGAGGCAAGGGATGCAGGGCCTTGCCTAGGCTGGACGACCACTCCATaGGGGTATCTTGCAAATGCA +
Preference number: 5 (lower is better)
Translates to: LQSHSARPEARDAGPCLGWTTTP*GYLANA
Trigger: TGCATTTGCAAGATACCCCAATGGAGTGGTCGTCCA...GCCTAGGCAAGGCCCTGCATCCCTTGCCTCAGGCCGGGCTGAGTGTGACTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR CAA 90 bp GGCCCCCACGGACGGCATGCCTGGGGAAGCCTAGTCTACTTACCATCAGCACGTCATGCGGCCAGAAGCTaGAGTGCTGTTCTCTCATGG +
Preference number: 5 (lower is better)
Translates to: GPHGRHAWGSLVYLPSARHAARS*SAVLSW
Trigger: CCATGAGAGAACAGCACTCAAGCTTCTGGCCGCATG...ACGTGCTGATGGTAAGTAGACTAGGCTTCCCCAGGCATGCCGTCCGTGGGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR CAA 90 bp CAGCACGCCATTGTCAGTTCCAGGTCCACTCATCCCCTGCGTGTTGCCGGGACCACCTCTCAGGAACACTaGGCAGCACGCCATTGTCAG +
Preference number: 5 (lower is better)
Translates to: QHAIVSSRSTHPLRVAGTTSQEH*AARHCQ
Trigger: CTGACAATGGCGTGCTGCCAAGTGTTCCTGAGAGGT...GGTCCCGGCAACACGCAGGGGATGAGTGGACCTGGAACTGACAATGGCGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS CCA 90 bp ACTGCACTGTCCTCTCGTGGCCTTTCAGAGGGGAGTTGGCTTTCTTaGACTGGTCCACGAGCACCTGCAGAGCTTTCTCGTGGAGCCCCT +
Preference number: 5 (lower is better)
Translates to: TALSSRGLSEGSWLS*TGPRAPAELSRGAP
Trigger: AGGGGCTCCACGAGAAAGCTCTGCAGGTGCTCGTGGACCAGTCCAAGAAAGCCAACTCCCCTCTGAAAGGCCACGAGAGGACAGTGCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318006.10
ENST00000348544.4
ENST00000563692.1
CDS CCA 90 bp GTGTCCAGTTTGCTGTGGTGTAGCTCGAGGACCTGCAGAGCGGCCTaGAGGTTGGCTTTTGGCTCCAGTAGTTCCAGCTTGATTGGCCCC +
Preference number: 5 (lower is better)
Translates to: VSSLLWCSSRTCRAA*RLAFGSSSSSLIGP
Trigger: GGGGCCAATCAAGCTGGAACTACTGGAGCCAAAAGCCAACCTCCAGGCCGCTCTGCAGGTCCTCGAGCTACACCACAGCAAACTGGACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318006.10
ENST00000348544.4
ENST00000562258.5
ENST00000562662.1
ENST00000568755.1
CDS TCA 90 bp AGGTACATCCGAAGCAGGGACAGATACACCTGTCTCAGAGAGACATaGGCTACGTCAGGCTGGCAGCAACCCTCCCAGAACCCCCAGCAC +
Preference number: 5 (lower is better)
Translates to: RYIRSRDRYTCLRET*ATSGWQQPSQNPQH
Trigger: GTGCTGGGGGTTCTGGGAGGGTTGCTGCCAGCCTGACGTAGCTCATGTCTCTCTGAGACAGGTGTATCTGTCCCTGCTTCGGATGTACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562662.1
ENST00000568755.1
CDS CCA 90 bp ACTGTCCTCTCGTGGCCTTTCAGAGGGGAGTTGGCTTTCTTGGACTaGTCCACGAGCACCTGCAGAGCTTTCTCGTGGAGCCCCTTCTTC +
Preference number: 5 (lower is better)
Translates to: TVLSWPFRGELAFLD*STSTCRAFSWSPFF
Trigger: GAAGAAGGGGCTCCACGAGAAAGCTCTGCAGGTGCTCGTGGACCAGTCCAAGAAAGCCAACTCCCCTCTGAAAGGCCACGAGAGGACAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318006.10
ENST00000348544.4
ENST00000563692.1
CDS-3UTR CAA 90 bp CCCCGCGTCCCCTCTGCTGTGCCTAAACACCTCTCAGGAACACTTGGCAGCACGCAGATCCCTTCCTCATaGAGTACCACGGTGAGATCA +
Preference number: 5 (lower is better)
Translates to: PRVPSAVPKHLSGTLGSTQIPSS*STTVRS
Trigger: TGATCTCACCGTGGTACTCAATGAGGAAGGGATCTG...CGTGCTGCCAAGTGTTCCTGAGAGGTGTTTAGGCACAGCAGAGGGGACGCGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR CAA 90 bp GCTCCTTCACCTCTCTGGGAGAGCCAAGCTGTCCATCCGCTGGATCCCCAGGATGTCCTGGAGAAGTTGTaGGATTTGGGTTGCCATGGG +
Preference number: 5 (lower is better)
Translates to: APSPLWESQAVHPLDPQDVLEKL*DLGCHG
Trigger: CCCATGGCAACCCAAATCCAACAACTTCTCCAGGAC...ATCCTGGGGATCCAGCGGATGGACAGCTTGGCTCTCCCAGAGAGGTGAAGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR CAA 90 bp TCTGCGAATGGGGCCAATGGCACTCACTGTCTCTTCAGGCCCCCACGGACGGCAAGCTTCTTCTTGGATTaGATGGTGGGAGTGCCTTCC +
Preference number: 5 (lower is better)
Translates to: SANGANGTHCLFRPPRTASFFLD*MVGVPS
Trigger: GGAAGGCACTCCCACCATCAAATCCAAGAAGAAGCT...TGCCGTCCGTGGGGGCCTGAAGAGACAGTGAGTGCCATTGGCCCCATTCGCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS TCA 90 bp TCGGTGCTCCCTGCAAACACCCTCCATCTCCCTAGGAACAACTCCTaGCCTTGGTGGTGTCCAGTTTGCTGTGGTGTAGCTCGAGGACCT +
Preference number: 5 (lower is better)
Translates to: SVLPANTLHLPRNNS*PWWCPVCCGVARGP
Trigger: AGGTCCTCGAGCTACACCACAGCAAACTGGACACCACCAAGGTCAGGAGTTGTTCCTAGGGAGATGGAGGGTGTTTGCAGGGAGCACCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568755.1
CDS CCA 90 bp ACCACTTCTCTGGCAGCGGCACCTCCTACAGAAGAGGCACATTGCTaGGGGGCCATTCCAAAAGCAGCCCACCCAAACCTCAAAGAACAG +
Preference number: 5 (lower is better)
Translates to: TTSLAAAPPTEEAHC*GAIPKAAHPNLKEQ
Trigger: CTGTTCTTTGAGGTTTGGGTGGGCTGCTTTTGGAATGGCCCCCCAGCAATGTGCCTCTTCTGTAGGAGGTGCCGCTGCCAGAGAAGTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614932.1
CDS-3UTR CAA 90 bp CCCACATCTGCGAATGGGGCCAATGGCACTCACTGTCTCTTCAGGCCCCCACGGCTTGTCCTGGAGAAGTaGTTGGATTTGGGTTGCCAT +
Preference number: 5 (lower is better)
Translates to: PTSANGANGTHCLFRPPRLVLEK*LDLGCH
Trigger: ATGGCAACCCAAATCCAACAACTTCTCCAGGACAAG...CCGTGGGGGCCTGAAGAGACAGTGAGTGCCATTGGCCCCATTCGCAGATGTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR CAA 90 bp CTGCAGTCACACTCAGCCCGGCCTGAGGCAAGGGATGCAGGGCCTTGCCTAGGCCAGCTTCTTTACCAATaGACTTCGTTTCTGTGTCAG +
Preference number: 5 (lower is better)
Translates to: LQSHSARPEARDAGPCLGQLLYQ*TSFLCQ
Trigger: CTGACACAGAAACGAAGTCAATTGGTAAAGAAGCTG...GCCTAGGCAAGGCCCTGCATCCCTTGCCTCAGGCCGGGCTGAGTGTGACTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR CAA 90 bp ACAGGGCGGCTACCGAGGGGTGCAGGGCACAGTTACCATGGAGACGTAAAACACTCTCCAACCACACCATaGCTGAACAAAGCTGGGGAG +
Preference number: 5 (lower is better)
Translates to: TGRLPRGAGHSYHGDVKHSPTTP*LNKAGE
Trigger: CTCCCCAGCTTTGTTCAGCAATGGTGTGGTTGGAGA...GTGTTTTACGTCTCCATGGTAACTGTGCCCTGCACCCCTCGGTAGCCGCCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS CCA 90 bp AGGTTTTCTGTGCCCAGATGCTGCAGATACTGCACTGTCCTCTCGTaGCCTTTCAGAGGGGAGTTGGCTTTCTTGGACTGGTCCACGAGC +
Preference number: 5 (lower is better)
Translates to: RFSVPRCCRYCTVLS*PFRGELAFLDWSTS
Trigger: GCTCGTGGACCAGTCCAAGAAAGCCAACTCCCCTCTGAAAGGCCACGAGAGGACAGTGCAGTATCTGCAGCATCTGGGCACAGAAAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318006.10
ENST00000348544.4
ENST00000563692.1
CDS-3UTR CAA 90 bp GGCCCCCACGGACGGCATGCCTGGGGAAGCCTAGTCTACTTACCATCAGCACGTTTCTGGCAGAAGAGGTaGAAGGCATACAAGTTCTTG +
Preference number: 5 (lower is better)
Translates to: GPHGRHAWGSLVYLPSARFWQKR*KAYKFL
Trigger: CAAGAACTTGTATGCCTTCAACCTCTTCTGCCAGAA...ACGTGCTGATGGTAAGTAGACTAGGCTTCCCCAGGCATGCCGTCCGTGGGGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR CAA 90 bp TGTCTCTTCAGGCCCCCACGGACGGCATGCCTGGGGAAGCCTAGTCTACTTACCCTCCATTGGGGTATCTaGCAAATGCACTGTTCCCAA +
Preference number: 5 (lower is better)
Translates to: CLFRPPRTACLGKPSLLTLHWGI*QMHCSQ
Trigger: TTGGGAACAGTGCATTTGCAAGATACCCCAATGGAG...GGTAAGTAGACTAGGCTTCCCCAGGCATGCCGTCCGTGGGGGCCTGAAGAGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS GCA 90 bp CCTCTAAGGCCTGGGGCCAACCGGCTTCCTAAAAGAACTGGTACCTaGAGGGAAGGACAGGAGATACTCCTTCATCAGACCTTGCACCTT +
Preference number: 5 (lower is better)
Translates to: PLRPGANRLPKRTGT*REGQEILLHQTLHL
Trigger: AAGGTGCAAGGTCTGATGAAGGAGTATCTCCTGTCCTTCCCTGCAGGTACCAGTTCTTTTAGGAAGCCGGTTGGCCCCAGGCCTTAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561797.1
ENST00000562258.5
CDS CCA 90 bp AATGGCACACAACCTCAACCCAAAGTGGGAAACAGCAGCTACTGTTaGTCTCACCCATGGCCACTGGTATGTCCGTCCAGTTCAGGGCAC +
Preference number: 5 (lower is better)
Translates to: NGTQPQPKVGNSSYC*SHPWPLVCPSSSGH
Trigger: GTGCCCTGAACTGGACGGACATACCAGTGGCCATGGGTGAGACCAACAGTAGCTGCTGTTTCCCACTTTGGGTTGAGGTTGTGTGCCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570062.1
CDS-3UTR CAA 90 bp GCCATTGTCAGTTCCAGGTCCACTCATCCCCTGCGTGTTGCCGGGACCCACCTTAGAAGATGTCCTTGTTaGGTTCCCACAAGAAGCCAT +
Preference number: 5 (lower is better)
Translates to: AIVSSRSTHPLRVAGTHLRRCPC*VPTRSH
Trigger: ATGGCTTCTTGTGGGAACCAAACAAGGACATCTTCT...AAGGTGGGTCCCGGCAACACGCAGGGGATGAGTGGACCTGGAACTGACAATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR CAA 90 bp CCTGGAGGAAGCAGAGTCCAAGCTGGCCCAGATGAGGCCCCGGGCAGCACTGCTTTGGAGAAGTTCTTATaGGATTTCTCTAGTGTCACT +
Preference number: 5 (lower is better)
Translates to: PGGSRVQAGPDEAPGSTALEKFL*DFSSVT
Trigger: AGTGACACTAGAGAAATCCAATAAGAACTTCTCCAA...AGCAGTGCTGCCCGGGGCCTCATCTGGGCCAGCTTGGACTCTGCTTCCTCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR CAA 90 bp TCCCAGAGTCAGGGAAGTGGGAGAGAAAGCCTGGGTAGGGCAGTGAGGGAAGTGTGTAGCAGCTTCTTCTaGGATTTGATGGTGGGAGTG +
Preference number: 5 (lower is better)
Translates to: SQSQGSGRESLGRAVREVCSSFF*DLMVGV
Trigger: CACTCCCACCATCAAATCCAAGAAGAAGCTGCTACA...CACTTCCCTCACTGCCCTACCCAGGCTTTCTCTCCCACTTCCCTGACTCTGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR CAA 90 bp CAGGTGCTCCTTCACCTCTCTGGGAGAGCCAAGCTGTCCATCCGCTGGATCCCCGACAGATACACATCTTaGTTGCCATCTTTGTTTCGG +
Preference number: 5 (lower is better)
Translates to: QVLLHLSGRAKLSIRWIPDRYTS*LPSLFR
Trigger: CCGAAACAAAGATGGCAACAAAGATGTGTATCTGTC...GGGGATCCAGCGGATGGACAGCTTGGCTCTCCCAGAGAGGTGAAGGAGCACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS TCA 90 bp CCTGAGGCAAGATGTAGGTCTTTGTCACTGGTATTCTCCAGGCTGTaGCCTGGTCTCCCAGCCTCCCTCACATTTTTAAGGCCCAACAGG +
Preference number: 5 (lower is better)
Translates to: PEARCRSLSLVFSRL*PGLPASLTFLRPNR
Trigger: CCTGTTGGGCCTTAAAAATGTGAGGGAGGCTGGGAGACCAGGTCACAGCCTGGAGAATACCAGTGACAAAGACCTACATCTTGCCTCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562258.5
CDS TCA 90 bp CACTGCAGGGAAGAAAATGGCTTGGGAGTGAGGACTGCTTCTAAGTaGCCACTTCTCTGGCAGCGGCACCTCCTACAGAAGAGGCACATT +
Preference number: 5 (lower is better)
Translates to: HCREENGLGVRTASK*PLLWQRHLLQKRHI
Trigger: AATGTGCCTCTTCTGTAGGAGGTGCCGCTGCCAGAGAAGTGGTCACTTAGAAGCAGTCCTCACTCCCAAGCCATTTTCTTCCCTGCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614932.1
CDS GCA 90 bp TGCGCACCTGCAGGGAAGGACAGGAGATACTCCTTCATCAGACCTTaGACCTTCTCACAGTATAGCTGGATCAGGCAGTTGTGGAACCGA +
Preference number: 5 (lower is better)
Translates to: CAPAGKDRRYSFIRP*TFSQYSWIRQLWNR
Trigger: TCGGTTCCACAACTGCCTGATCCAGCTATACTGTGAGAAGGTGCAAGGTCTGATGAAGGAGTATCTCCTGTCCTTCCCTGCAGGTGCGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563692.1
CDS CCA 90 bp ATGGGACTCCGTTCTGCAGGAATGGCACACAACCTCAACCCAAAGTaGGAAACAGCAGCTACTGTTGGTCTCACCCATGGCCACTGGTAT +
Preference number: 5 (lower is better)
Translates to: MGLRSAGMAHNLNPK*ETAATVGLTHGHWY
Trigger: ATACCAGTGGCCATGGGTGAGACCAACAGTAGCTGCTGTTTCCCACTTTGGGTTGAGGTTGTGTGCCATTCCTGCAGAACGGAGTCCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570062.1
CDS-3UTR CAA 90 bp TGCCGGGACCCACCTTCCTGCGCTATCCCAGCACAACTCTCCAACCACACCATTAATGAAACGGGGCCTTaGCAATTCAATGCTTTGGAC +
Preference number: 5 (lower is better)
Translates to: CRDPPSCAIPAQLSNHTINETGP*QFNALD
Trigger: GTCCAAAGCATTGAATTGCAAAGGCCCCGTTTCATT...AATGGTGTGGTTGGAGAGTTGTGCTGGGATAGCGCAGGAAGGTGGGTCCCGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR CAA 90 bp GGCCCCCACGGACGGCATGCCTGGGGAAGCCTAGTCTACTTACCATCAGCACGTCTTGATGTGATGAATTaGTTGCTGCTTTTCACTGTC +
Preference number: 5 (lower is better)
Translates to: GPHGRHAWGSLVYLPSARLDVMN*LLLFTV
Trigger: GACAGTGAAAAGCAGCAACAAATTCATCACATCAAG...ACGTGCTGATGGTAAGTAGACTAGGCTTCCCCAGGCATGCCGTCCGTGGGGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR CAA 90 bp CAGGTGCTCCTTCACCTCTCTGGGAGAGCCAAGCTGTCCATCCGCTGGATCCCCAAGGTTCTTGAGCACTaGATTGAACCGTTTCTTTTG +
Preference number: 5 (lower is better)
Translates to: QVLLHLSGRAKLSIRWIPKVLEH*IEPFLL
Trigger: CAAAAGAAACGGTTCAATCAAGTGCTCAAGAACCTT...GGGGATCCAGCGGATGGACAGCTTGGCTCTCCCAGAGAGGTGAAGGAGCACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR CAA 90 bp CCCCGCGTCCCCTCTGCTGTGCCTAAACACCTCTCAGGAACACTTGGCAGCACGTTAATAGAAAAGCCCTaGATGAACAACCCCATGGTT +
Preference number: 5 (lower is better)
Translates to: PRVPSAVPKHLSGTLGSTLIEKP*MNNPMV
Trigger: AACCATGGGGTTGTTCATCAAGGGCTTTTCTATTAA...CGTGCTGCCAAGTGTTCCTGAGAGGTGTTTAGGCACAGCAGAGGGGACGCGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR CAA 90 bp GATGGTGCACATCCTCCTGACCAAGCAGGTACTGAATTCTCTGGAATTGCCCACAAGGGATGCAGGGCCTaGCCTAGGCAGAGAATGATG +
Preference number: 5 (lower is better)
Translates to: DGAHPPDQAGTEFSGIAHKGCRA*PRQRMM
Trigger: CATCATTCTCTGCCTAGGCAAGGCCCTGCATCCCTT...GTGGGCAATTCCAGAGAATTCAGTACCTGCTTGGTCAGGAGGATGTGCACCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS TCA 90 bp TCGGTTCAAATGTTCGGATCTCAACATATCGAGGCAACACTGCAATaGTGTAGGGAGGCTGGTGCTCCATGGCCACTGGTATGTCCGTCC +
Preference number: 5 (lower is better)
Translates to: SVQMFGSQHIEATLQ*CREAGAPWPLVCPS
Trigger: GGACGGACATACCAGTGGCCATGGAGCACCAGCCTCCCTACATCATTGCAGTGTTGCCTCGATATGTTGAGATCCGAACATTTGAACCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318006.10
ENST00000348544.4
CDS GCA 90 bp CTGGTACCTGCAGGGAAGGACAGGAGATACTCCTTCATCAGACCTTaGACCTTCTCACAGTATAGCTGGATCAGGCAGTTGTGGAACCGA +
Preference number: 5 (lower is better)
Translates to: LVPAGKDRRYSFIRP*TFSQYSWIRQLWNR
Trigger: TCGGTTCCACAACTGCCTGATCCAGCTATACTGTGAGAAGGTGCAAGGTCTGATGAAGGAGTATCTCCTGTCCTTCCCTGCAGGTACCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561797.1
ENST00000562258.5
CDS CCA 90 bp ATGGGTGGGATTGCGAGCTGCAGAGCCAATTCAAACTGCTTGTCCTaGAGAAGTTGTTGGATTTGGGTTGCCATGGGGACAGGGATGAGT +
Preference number: 5 (lower is better)
Translates to: MGGIASCRANSNCLS*RSCWIWVAMGTGMS
Trigger: ACTCATCCCTGTCCCCATGGCAACCCAAATCCAACAACTTCTCCAGGACAAGCAGTTTGAATTGGCTCTGCAGCTCGCAATCCCACCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568029.5
CDS-3UTR CAA 90 bp GCCATTGTCAGTTCCAGGTCCACTCATCCCCTGCGTGTTGCCGGGACCCACCTTGATGTGATGAATTTGTaGCTGCTTTTCACTGTCAGA +
Preference number: 5 (lower is better)
Translates to: AIVSSRSTHPLRVAGTHLDVMNL*LLFTVR
Trigger: TCTGACAGTGAAAAGCAGCAACAAATTCATCACATC...AAGGTGGGTCCCGGCAACACGCAGGGGATGAGTGGACCTGGAACTGACAATGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR CAA 90 bp GTGTGCAAAGGCAAGATGGTGCACATCCTCCTGACCAAGCAGGTACTGAATTCTCCTGGAGGTTGGCTTTaGGCTCCAGTAGTTCCAGCT +
Preference number: 5 (lower is better)
Translates to: VCKGKMVHILLTKQVLNSPGGWL*APVVPA
Trigger: AGCTGGAACTACTGGAGCCAAAAGCCAACCTCCAGG...AGAATTCAGTACCTGCTTGGTCAGGAGGATGTGCACCATCTTGCCTTTGCACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS TCA 90 bp GCCATTCCAAAAGCAGCCCACCCAAACCTCAAAGAACAGCCTGCCTaGGGGGCTCTGGATTTCTGTAGCCATCATCTCTGTCAAATAACC +
Preference number: 5 (lower is better)
Translates to: AIPKAAHPNLKEQPA*GALDFCSHHLCQIT
Trigger: GGTTATTTGACAGAGATGATGGCTACAGAAATCCAGAGCCCCTCAGGCAGGCTGTTCTTTGAGGTTTGGGTGGGCTGCTTTTGGAATGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614932.1
CDS GCA 90 bp AAGCCTCGGTTCAAATGTTCGGATCTCAACATATCGAGGCAACACTaGAATGATGTAGGGAGGCTGGTGCTCCATGGCCACTGGTATGTC +
Preference number: 5 (lower is better)
Translates to: KPRFKCSDLNISRQH*NDVGRLVLHGHWYV
Trigger: GACATACCAGTGGCCATGGAGCACCAGCCTCCCTACATCATTGCAGTGTTGCCTCGATATGTTGAGATCCGAACATTTGAACCGAGGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318006.10
ENST00000348544.4
CDS GCA 90 bp GTTTTGCCTGCAGGGAAGGACAGGAGATACTCCTTCATCAGACCTTaGACCTTCTCACAGTATAGCTGGATCAGGCAGTTGTGGAACCGA +
Preference number: 5 (lower is better)
Translates to: VLPAGKDRRYSFIRP*TFSQYSWIRQLWNR
Trigger: TCGGTTCCACAACTGCCTGATCCAGCTATACTGTGAGAAGGTGCAAGGTCTGATGAAGGAGTATCTCCTGTCCTTCCCTGCAGGCAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318006.10
ENST00000348544.4
CDS GCA 90 bp CACAACGTAAACCAGTCTGCTAAAGCTACGAATGGGACTCCGTTCTaGAGGAATGGCACACAACCTCAACCCAAAGTGGGAAACAGCAGC +
Preference number: 5 (lower is better)
Translates to: HNVNQSAKATNGTPF*RNGTQPQPKVGNSS
Trigger: GCTGCTGTTTCCCACTTTGGGTTGAGGTTGTGTGCCATTCCTGCAGAACGGAGTCCCATTCGTAGCTTTAGCAGACTGGTTTACGTTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570062.1
CDS CCA 90 bp ATCAGACCTTGCACCTTCTCACAGTATAGCTGGATCAGGCAGTTGTaGAACCGAGAGCCTGTCTCCTCCCAAACATGGATGATGTGTTCC +
Preference number: 5 (lower is better)
Translates to: IRPCTFSQYSWIRQL*NREPVSSQTWMMCS
Trigger: GGAACACATCATCCATGTTTGGGAGGAGACAGGCTCTCGGTTCCACAACTGCCTGATCCAGCTATACTGTGAGAAGGTGCAAGGTCTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318006.10
ENST00000348544.4
ENST00000561797.1
ENST00000562258.5
ENST00000563692.1
CDS CCA 90 bp AGGAGATACTCCTTCATCAGACCTTGCACCTTCTCACAGTATAGCTaGATCAGGCAGTTGTGGAACCGAGAGCCTGTCTCCTCCCAAACA +
Preference number: 5 (lower is better)
Translates to: RRYSFIRPCTFSQYS*IRQLWNREPVSSQT
Trigger: TGTTTGGGAGGAGACAGGCTCTCGGTTCCACAACTGCCTGATCCAGCTATACTGTGAGAAGGTGCAAGGTCTGATGAAGGAGTATCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318006.10
ENST00000348544.4
ENST00000561797.1
ENST00000562258.5
ENST00000563692.1
CDS CCA 90 bp AACATGGATGATGTGTTCCTGAGGCAAGATGTAGGTCTTTGTCACTaGTATTCTCCAGGCTGTGACCTGGTCTCCCAGCCTCCCTCACAT +
Preference number: 5 (lower is better)
Translates to: NMDDVFLRQDVGLCH*YSPGCDLVSQPPSH
Trigger: ATGTGAGGGAGGCTGGGAGACCAGGTCACAGCCTGGAGAATACCAGTGACAAAGACCTACATCTTGCCTCAGGAACACATCATCCATGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562258.5
CDS-3UTR CAA 90 bp GCTACCGAGGGGTGCAGGGCACAGTTACCATGGAGACGTAAAACACTACACAGAGTCACTTCAAATCTGTaGCAACCAACGTCCTTCCGA +
Preference number: 5 (lower is better)
Translates to: ATEGCRAQLPWRRKTLHRVTSNL*QPTSFR
Trigger: TCGGAAGGACGTTGGTTGCAACAGATTTGAAGTGAC...TCTGTGTAGTGTTTTACGTCTCCATGGTAACTGTGCCCTGCACCCCTCGGTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR CAA 90 bp GCTCCTTCACCTCTCTGGGAGAGCCAAGCTGTCCATCCGCTGGATCCCCAGGATATTGAACCGTTTCTTTaGTGCATTTTCTTCCAAGAC +
Preference number: 5 (lower is better)
Translates to: APSPLWESQAVHPLDPQDIEPFL*CIFFQD
Trigger: GTCTTGGAAGAAAATGCACAAAAGAAACGGTTCAAT...ATCCTGGGGATCCAGCGGATGGACAGCTTGGCTCTCCCAGAGAGGTGAAGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR CAA 90 bp GATGGTGCACATCCTCCTGACCAAGCAGGTACTGAATTCTCTGGAATTGCCCACTGGACGACCACTCCATaGGGGTATCTTGCAAATGCA +
Preference number: 5 (lower is better)
Translates to: DGAHPPDQAGTEFSGIAHWTTTP*GYLANA
Trigger: TGCATTTGCAAGATACCCCAATGGAGTGGTCGTCCA...GTGGGCAATTCCAGAGAATTCAGTACCTGCTTGGTCAGGAGGATGTGCACCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318006.10
ENST00000564994.5
CDS-3UTR CAA 90 bp TTCAGAGTTGTTCCAGGGCACAAGATAGCCAGTAATGTCCAAATGGGGAGCCTTAGGCCACTAAAACTGTaGGTGCTGGGCACCATCACC +
Preference number: 5 (lower is better)
Translates to: FRVVPGHKIASNVQMGSLRPLKL*VLGTIT
Trigger: GGTGATGGTGCCCAGCACCAACAGTTTTAGTGGCCT...AAGGCTCCCCATTTGGACATTACTGGCTATCTTGTGCCCTGGAACAACTCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR CAA 90 bp CACAGGTTTGGCGGTGAGTTATTTTTAAACCAGCGTCCTGCTGTTCTTGCCCCCCTTACCATCAGCACGTaGATCTGTCACACAGCATGG +
Preference number: 5 (lower is better)
Translates to: HRFGGELFLNQRPAVLAPLTIST*ICHTAW
Trigger: CCATGCTGTGTGACAGATCAACGTGCTGATGGTAAG...GGGGGCAAGAACAGCAGGACGCTGGTTTAAAAATAACTCACCGCCAAACCTGTG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS TCA 90 bp TCAGGCAGTTGTGGAACCGAGAGCCTGTCTCCTCCCAAACATGGATaGTGTGTTCCTGAGGCAAGATGTAGGTCTTTGTCACTGGTATTC +
Preference number: 5 (lower is better)
Translates to: SGSCGTESLSPPKHG*CVPEARCRSLSLVF
Trigger: GAATACCAGTGACAAAGACCTACATCTTGCCTCAGGAACACATCATCCATGTTTGGGAGGAGACAGGCTCTCGGTTCCACAACTGCCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562258.5
CDS TCA 90 bp TTAAAGATGGGCAGTGCACCAGCCCAAAGCTCAGCCCTGGCTTCCTaGGAGCCAACAATGTTCATCAGAACAGGTTTCAGGCTAATTCTG +
Preference number: 5 (lower is better)
Translates to: LKMGSAPAQSSALAS*EPTMFIRTGFRLIL
Trigger: CAGAATTAGCCTGAAACCTGTTCTGATGAACATTGTTGGCTCTCAGGAAGCCAGGGCTGAGCTTTGGGCTGGTGCACTGCCCATCTTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614932.1
CDS TCA 90 bp CCCAACAGGTCCCATCCAGATTATCCCCTAATCGGGCTGCAAAGATaGCTAAGAGACAGCTCGTCTAAAGCCACCAGGAAGTTTCACAAT +
Preference number: 5 (lower is better)
Translates to: PNRSHPDYPLIGLQR*LRDSSSKATRKFHN
Trigger: ATTGTGAAACTTCCTGGTGGCTTTAGACGAGCTGTCTCTTAGTCATCTTTGCAGCCCGATTAGGGGATAATCTGGATGGGACCTGTTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562258.5
CDS-3UTR CAA 90 bp GTTGAGGGAAGGAAGAATGGAGCTTGGGAGCATGGGATCATGTATGTATACCAGGTTGGAAAGAGCTCTTaGATGGACCCCTTTCCATCC +
Preference number: 5 (lower is better)
Translates to: VEGRKNGAWEHGIMYVYQVGKSS*MDPFPS
Trigger: GGATGGAAAGGGGTCCATCAAAGAGCTCTTTCCAAC...CTGGTATACATACATGATCCCATGCTCCCAAGCTCCATTCTTCCTTCCCTCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR CAA 90 bp GTGTGCAAAGGCAAGATGGTGCACATCCTCCTGACCAAGCAGGTACTGAATTCTGCCAATTCAAACTGCTaGTCCTGGAGAAGTTGTTGG +
Preference number: 5 (lower is better)
Translates to: VCKGKMVHILLTKQVLNSANSNC*SWRSCW
Trigger: CCAACAACTTCTCCAGGACAAGCAGTTTGAATTGGC...AGAATTCAGTACCTGCTTGGTCAGGAGGATGTGCACCATCTTGCCTTTGCACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR CAA 90 bp AAGATGGTGCACATCCTCCTGACCAAGCAGGTACTGAATTCTCTGGAATTGCCCACTCCTCAGCCATCCTaGTATCCTTCAAGATGTGGA +
Preference number: 5 (lower is better)
Translates to: KMVHILLTKQVLNSLELPTPQPS*YPSRCG
Trigger: TCCACATCTTGAAGGATACAAGGATGGCTGAGGAGT...GGGCAATTCCAGAGAATTCAGTACCTGCTTGGTCAGGAGGATGTGCACCATCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS GCA 90 bp AGCCAATTCAAACTGCTTGTCCTGGAGAAGTTGTTGGATTTGGGTTaGCATGGGGACAGGGATGAGTCTCCAAACAAAATGATTGCTGGC +
Preference number: 5 (lower is better)
Translates to: SQFKLLVLEKLLDLG*HGDRDESPNKMIAG
Trigger: GCCAGCAATCATTTTGTTTGGAGACTCATCCCTGTCCCCATGGCAACCCAAATCCAACAACTTCTCCAGGACAAGCAGTTTGAATTGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318006.10
ENST00000348544.4
ENST00000568029.5
ENST00000570023.1
CDS GCA 90 bp AGGTCTTTAAATTCTCGAAGCCCACTCCCAACAGATAGAACAGGCTaGTCTCTGAAGGCTCAAGAACTAAAAGTTGTCAGGACAGCCAGC +
Preference number: 5 (lower is better)
Translates to: RSLNSRSPLPTDRTG*SLKAQELKVVRTAS
Trigger: GCTGGCTGTCCTGACAACTTTTAGTTCTTGAGCCTTCAGAGAGCAGCCTGTTCTATCTGTTGGGAGTGGGCTTCGAGAATTTAAAGACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564994.5
CDS CCA 90 bp CTGGGTTTACCTCTTTGGAACAGAAGTAATGGACGACCACTCCATTaGGGTATCTTGCAAATGCACTGCAGGGAAGAAAATGGCTTGGGA +
Preference number: 5 (lower is better)
Translates to: LGLPLWNRSNGRPLH*GILQMHCREENGLG
Trigger: TCCCAAGCCATTTTCTTCCCTGCAGTGCATTTGCAAGATACCCCAATGGAGTGGTCGTCCATTACTTCTGTTCCAAAGAGGTAAACCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614932.1
CDS-3UTR CAA 90 bp AAAAGCTGGCAATGCCAGACCATGAGTCTAATTAATTCAGAGTTGTTCCAGGGCGAACATGAGGAGCTTTaGCCGGTATTCTCCCAGCTC +
Preference number: 5 (lower is better)
Translates to: KSWQCQTMSLINSELFQGEHEEL*PVFSQL
Trigger: GAGCTGGGAGAATACCGGCAAAAGCTCCTCATGTTC...GCCCTGGAACAACTCTGAATTAATTAGACTCATGGTCTGGCATTGCCAGCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS TCA 90 bp AAATATCTTCAGGCCATCTTCTGGGAAGTCTCTCAGCACCCACACTaGGTAGGAGAAAATCAAATGCAGGTTTTCTGTGCCCAGATGCTG +
Preference number: 5 (lower is better)
Translates to: KYLQAIFWEVSQHPH*VGENQMQVFCAQML
Trigger: CAGCATCTGGGCACAGAAAACCTGCATTTGATTTTCTCCTACTCAGTGTGGGTGCTGAGAGACTTCCCAGAAGATGGCCTGAAGATATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318006.10
ENST00000348544.4
ENST00000563692.1
CDS TCA 90 bp AGTACTCCTCAGCCATCCTTGTATCCTTCAAGATGTGGACATAAATaGAAAGAGCTTGTTCATGTTTCCCCATGCGCCCCAACAGGAGAG +
Preference number: 5 (lower is better)
Translates to: STPQPSLYPSRCGHK*KELVHVSPCAPTGE
Trigger: CTCTCCTGTTGGGGCGCATGGGGAAACATGAACAAGCTCTTTTCATTTATGTCCACATCTTGAAGGATACAAGGATGGCTGAGGAGTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318006.10
ENST00000348544.4
ENST00000562258.5
CDS TCA 90 bp CTTACTCCTCAGCCATCCTTGTATCCTTCAAGATGTGGACATAAATaGAAAGAGCTTGTTCATGTTTCCCCATGCGCCCCAACAGGAGAG +
Preference number: 5 (lower is better)
Translates to: LTPQPSLYPSRCGHK*KELVHVSPCAPTGE
Trigger: CTCTCCTGTTGGGGCGCATGGGGAAACATGAACAAGCTCTTTTCATTTATGTCCACATCTTGAAGGATACAAGGATGGCTGAGGAGTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561818.1
CDS GCA 90 bp TCAGAATCATCTTTCATTTCTGCGAGCTGCAGAGCCAATTCAAACTaGTTGTCCTGGAGAAGTTGTTGGATTTGGGTTGCCATGGGGACA +
Preference number: 5 (lower is better)
Translates to: SESSFISASCRANSN*LSWRSCWIWVAMGT
Trigger: TGTCCCCATGGCAACCCAAATCCAACAACTTCTCCAGGACAAGCAGTTTGAATTGGCTCTGCAGCTCGCAGAAATGAAAGATGATTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318006.10
ENST00000348544.4
ENST00000570023.1
CDS GCA 90 bp AAGCCTCGGTTCAAATGTTCGGATCTCAACATATCGAGGCAACACTaGAATGATGTAGGGAGGCTGGTGCTCTGTGAAAGAGAACATACA +
Preference number: 5 (lower is better)
Translates to: KPRFKCSDLNISRQH*NDVGRLVLCEREHT
Trigger: TGTATGTTCTCTTTCACAGAGCACCAGCCTCCCTACATCATTGCAGTGTTGCCTCGATATGTTGAGATCCGAACATTTGAACCGAGGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568029.5
CDS CCA 90 bp GATCCTCCTGAGGTAATGAAACGGGGCCTTTGCAATTCAATGCTTTaGACCAGAAGCCTCGGTTCAAATGTTCGGATCTCAACATATCGA +
Preference number: 5 (lower is better)
Translates to: DPPEVMKRGLCNSML*TRSLGSNVRISTYR
Trigger: TCGATATGTTGAGATCCGAACATTTGAACCGAGGCTTCTGGTCCAAAGCATTGAATTGCAAAGGCCCCGTTTCATTACCTCAGGAGGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318006.10
ENST00000348544.4
ENST00000568029.5
CDS-3UTR CAA 90 bp GGAGCTTGGGAGCATGGGATCATGTATGTATACCAGGAAAGAAAACACACATTCAGCACAGGCAATGGGTaGGGATACTGCAACTGCTTT +
Preference number: 5 (lower is better)
Translates to: GAWEHGIMYVYQERKHTFSTGNG*GYCNCF
Trigger: AAAGCAGTTGCAGTATCCCAACCCATTGCCTGTGCT...GAATGTGTGTTTTCTTTCCTGGTATACATACATGATCCCATGCTCCCAAGCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS-3UTR CAA 90 bp GATGGTGCACATCCTCCTGACCAAGCAGGTACTGAATTCTCTGGAATTGCCCACAGATACACATCTTTGTaGCCATCTTTGTTTCGGTCA +
Preference number: 5 (lower is better)
Translates to: DGAHPPDQAGTEFSGIAHRYTSL*PSLFRS
Trigger: TGACCGAAACAAAGATGGCAACAAAGATGTGTATCT...GTGGGCAATTCCAGAGAATTCAGTACCTGCTTGGTCAGGAGGATGTGCACCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318006.10
CDS CCA 90 bp TCACTGGATCTTCCTTATAAGAACTTTCTGCAGACCTACATCTCTTaGGCACCCACTATATCAGGTTCTAGCTTCAAGAGGGGAAGAGTT +
Preference number: 5 (lower is better)
Translates to: SLDLPYKNFLQTYIS*APTISGSSFKRGRV
Trigger: AACTCTTCCCCTCTTGAAGCTAGAACCTGATATAGTGGGTGCCCAAGAGATGTAGGTCTGCAGAAAGTTCTTATAAGGAAGATCCAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614932.1
CDS GCA 90 bp GGAAGAGTTTTATGGACAAGAATCCAACAGCTCCATACCATACATTaGAGGTCTTTAAATTCTCGAAGCCCACTCCCAACAGATAGAACA +
Preference number: 5 (lower is better)
Translates to: GRVLWTRIQQLHTIH*RSLNSRSPLPTDRT
Trigger: TGTTCTATCTGTTGGGAGTGGGCTTCGAGAATTTAAAGACCTGCAATGTATGGTATGGAGCTGTTGGATTCTTGTCCATAAAACTCTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614932.1
CDS GCA 90 bp AAGATCTTTTTCTTCCTTCACTGGATCTTCCTTATAAGAACTTTCTaGAGACCTACATCTCTTGGGCACCCACTATATCAGGTTCTAGCT +
Preference number: 5 (lower is better)
Translates to: KIFFFLHWIFLIRTF*RPTSLGHPLYQVLA
Trigger: AGCTAGAACCTGATATAGTGGGTGCCCAAGAGATGTAGGTCTGCAGAAAGTTCTTATAAGGAAGATCCAGTGAAGGAAGAAAAAGATCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614932.1
CDS CCA 90 bp AGAGAACATACACAGCAGTTGTTCCGGTCTAAGGCTTTGGGTTTATaGAGTGTTTCAGCTGCCCATTCTAAGATACATTTAAATGGATCT +
Preference number: 5 (lower is better)
Translates to: REHTQQLFRSKALGL*SVSAAHSKIHLNGS
Trigger: AGATCCATTTAAATGTATCTTAGAATGGGCAGCTGAAACACTCCATAAACCCAAAGCCTTAGACCGGAACAACTGCTGTGTATGTTCTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568029.5
CDS TCA 90 bp TATGAGTCTGGCTCAGGATCCTACTTGAGTCACAATGCAGTAGCTTaGAAGATCTTTTTCTTCCTTCACTGGATCTTCCTTATAAGAACT +
Preference number: 5 (lower is better)
Translates to: YESGSGSYLSHNAVA*KIFFFLHWIFLIRT
Trigger: AGTTCTTATAAGGAAGATCCAGTGAAGGAAGAAAAAGATCTTTCAAGCTACTGCATTGTGACTCAAGTAGGATCCTGAGCCAGACTCATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614932.1
CDS CAA 90 bp ATCGGCACTGGCTCGAAAGCGTCGTGCATGGCGGCAAGGGGAGAGTaGCCACCGCCGTCTCGCCCAGAGTGTTCCGGGCCGGGCTGGGGT +
Preference number: 6 (lower is better)
Translates to: IGTGSKASCMAARGE*PPPSRPECSGPGWG
Trigger: ACCCCAGCCCGGCCCGGAACACTCTGGGCGAGACGGCGGTGGCAACTCTCCCCTTGCCGCCATGCACGACGCTTTCGAGCCAGTGCCGAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318006.10
ENST00000568357.1
CDS GCA 72 bp GCTCGAAAGCGTCGTGCATGGCGGCAAGGGGAGAGTTaGCACCGCCGTCTCGCCCAGAGTGTTCCGGGCCGG +
Preference number: 6 (lower is better)
Translates to: ARKRRAWRQGES*HRRLAQSVPGR
Trigger: CCGGCCCGGAACACTCTGGGCGAGACGGCGGTGGCAACTCTCCCCTTGCCGCCATGCACGACGCTTTCGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318006.10
ENST00000568357.1
CDS CCA 72 bp GAGTGTTCCGGGCCGGGCTGGGGTCCGGAACGAGTCTaGGCTAAGGGTAGACCGGGATCCGGCCAGGAACCC +
Preference number: 6 (lower is better)
Translates to: ECSGPGWGPERV*AKGRPGSGQEP
Trigger: GGGTTCCTGGCCGGATCCCGGTCTACCCTTAGCCCAGACTCGTTCCGGACCCCAGCCCGGCCCGGAACACTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318006.10
ENST00000568357.1
CDS CAA 72 bp GGCTCGAAAGCGTCGTGCATGGCGGCAAGGGGAGAGTaGCCACCGCCGTCTCGCCCAGAGTGTTCCGGGCCG +
Preference number: 6 (lower is better)
Translates to: GSKASCMAARGE*PPPSRPECSGP
Trigger: CGGCCCGGAACACTCTGGGCGAGACGGCGGTGGCAACTCTCCCCTTGCCGCCATGCACGACGCTTTCGAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318006.10
ENST00000568357.1
CDS GCA 72 bp CCTGCTTACCCCCACCACACGTGGCACCTGGGTCTGTaGTCTCCTCTAAGGCCTGGGGCCAACCGGCTTCCT +
Preference number: 6 (lower is better)
Translates to: PAYPHHTWHLGL*SPLRPGANRLP
Trigger: AGGAAGCCGGTTGGCCCCAGGCCTTAGAGGAGAGCACAGACCCAGGTGCCACGTGTGGTGGGGGTAAGCAGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561797.1
ENST00000562258.5
CDS CCA 72 bp TTTCTAGGATCGGCACTGGCTCGAAAGCGTCGTGCATaGCGGCAAGGGGAGAGTTGCCACCGCCGTCTCGCC +
Preference number: 6 (lower is better)
Translates to: FLGSALARKRRA*RQGESCHRRLA
Trigger: GGCGAGACGGCGGTGGCAACTCTCCCCTTGCCGCCATGCACGACGCTTTCGAGCCAGTGCCGATCCTAGAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318006.10
ENST00000568357.1
CDS GCA 72 bp GAACTTCTGCGCACCTGGGCAGAGAATAGGGTGGCCTaGTTACCCCCACCACACGTGGCACCTGGGTCTGTG +
Preference number: 6 (lower is better)
Translates to: ELLRTWAENRVA*LPPPHVAPGSV
Trigger: CACAGACCCAGGTGCCACGTGTGGTGGGGGTAAGCAGGCCACCCTATTCTCTGCCCAGGTGCGCAGAAGTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561797.1
ENST00000562258.5
CDS CCA 72 bp CAGAGAATAGGGTGGCCTGCTTACCCCCACCACACGTaGCACCTGGGTCTGTGCTCTCCTCTAAGGCCTGGG +
Preference number: 6 (lower is better)
Translates to: QRIGWPAYPHHT*HLGLCSPLRPG
Trigger: CCCAGGCCTTAGAGGAGAGCACAGACCCAGGTGCCACGTGTGGTGGGGGTAAGCAGGCCACCCTATTCTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561797.1
ENST00000562258.5
CDS GCA 72 bp AGCTTTTCTAGGATCGGCACTGGCTCGAAAGCGTCGTaGATGGCGGCAAGGGGAGAGTTGCCACCGCCGTCT +
Preference number: 6 (lower is better)
Translates to: SFSRIGTGSKAS*MAARGELPPPS
Trigger: AGACGGCGGTGGCAACTCTCCCCTTGCCGCCATGCACGACGCTTTCGAGCCAGTGCCGATCCTAGAAAAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318006.10
ENST00000568357.1
CDS CCA 72 bp CTTCAGAACTTCTGCGCACCTGGGCAGAGAATAGGGTaGCCTGCTTACCCCCACCACACGTGGCACCTGGGT +
Preference number: 6 (lower is better)
Translates to: LQNFCAPGQRIG*PAYPHHTWHLG
Trigger: ACCCAGGTGCCACGTGTGGTGGGGGTAAGCAGGCCACCCTATTCTCTGCCCAGGTGCGCAGAAGTTCTGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561797.1
ENST00000562258.5
CDS CCA 72 bp GAACAACTCCTGACCTTGGTGGTGTCCAGTTTGCTGTaGTGTAGCTCGAGGACCTGCAGAGCGGCCTGGAGG +
Preference number: 6 (lower is better)
Translates to: EQLLTLVVSSLL*CSSRTCRAAWR
Trigger: CCTCCAGGCCGCTCTGCAGGTCCTCGAGCTACACCACAGCAAACTGGACACCACCAAGGTCAGGAGTTGTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568755.1
CDS CAA 90 bp TACTGCACTGTCCTCTCGTGGCCTTTCAGAGGGGAGTTGGCTTTCTaGGACTGGTCCACGAGCACCTGCAGAGCTTTCTCGTGGAGCCCC +
Preference number: 6 (lower is better)
Translates to: YCTVLSWPFRGELAF*DWSTSTCRAFSWSP
Trigger: GGGGCTCCACGAGAAAGCTCTGCAGGTGCTCGTGGACCAGTCCAAGAAAGCCAACTCCCCTCTGAAAGGCCACGAGAGGACAGTGCAGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318006.10
ENST00000348544.4
ENST00000563692.1
CDS CAA 90 bp AGTTTGCTGTGGTGTAGCTCGAGGACCTGCAGAGCGGCCTGGAGGTaGGCTTTTGGCTCCAGTAGTTCCAGCTTGATTGGCCCCAGGCAG +
Preference number: 6 (lower is better)
Translates to: SLLWCSSRTCRAAWR*AFGSSSSSLIGPRQ
Trigger: CTGCCTGGGGCCAATCAAGCTGGAACTACTGGAGCCAAAAGCCAACCTCCAGGCCGCTCTGCAGGTCCTCGAGCTACACCACAGCAAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318006.10
ENST00000348544.4
ENST00000562258.5
ENST00000562662.1
ENST00000568755.1
CDS TCA 72 bp TTCTTTAGCACGTGCTCGCTCTCCTCGATGTGGCAGTaGTTGTTCTCCAGGCGTAGCAAGGGGGCCACCAGG +
Preference number: 6 (lower is better)
Translates to: FFSTCSLSSMWQ*LFSRRSKGATR
Trigger: CCTGGTGGCCCCCTTGCTACGCCTGGAGAACAATCACTGCCACATCGAGGAGAGCGAGCACGTGCTAAAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318006.10
ENST00000348544.4
CDS CCA 72 bp TCGTGGCCTTTCAGAGGGGAGTTGGCTTTCTTGGACTaGTCCACGAGCACCTGCAGAGCTTTCTCGTGGAGC +
Preference number: 6 (lower is better)
Translates to: SWPFRGELAFLD*STSTCRAFSWS
Trigger: GCTCCACGAGAAAGCTCTGCAGGTGCTCGTGGACCAGTCCAAGAAAGCCAACTCCCCTCTGAAAGGCCACGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318006.10
ENST00000348544.4
ENST00000563692.1
CDS TCA 72 bp CGAAGCAGGGACAGATACACCTGTCTCAGAGAGACATaGGCTACGTCAGGCTGGCAGCAACCCTCCCAGAAC +
Preference number: 6 (lower is better)
Translates to: RSRDRYTCLRET*ATSGWQQPSQN
Trigger: GTTCTGGGAGGGTTGCTGCCAGCCTGACGTAGCTCATGTCTCTCTGAGACAGGTGTATCTGTCCCTGCTTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562662.1
ENST00000568755.1
CDS GCA 72 bp AGAAGCCATTCCTCCCAGGCAGCCAGACAGTCGATTTaGAGAGGCAGCTTTTCTAGGATCGGCACTGGCTCG +
Preference number: 6 (lower is better)
Translates to: RSHSSQAARQSI*RGSFSRIGTGS
Trigger: CGAGCCAGTGCCGATCCTAGAAAAGCTGCCTCTGCAAATCGACTGTCTGGCTGCCTGGGAGGAATGGCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318006.10
ENST00000348544.4
ENST00000568357.1
CDS GCA 72 bp TGTCACTTAGCTCCCCTGGCTCCTCTTCAGAACTTCTaGGCACCTGGGCAGAGAATAGGGTGGCCTGCTTAC +
Preference number: 6 (lower is better)
Translates to: CHLAPLAPLQNF*APGQRIGWPAY
Trigger: GTAAGCAGGCCACCCTATTCTCTGCCCAGGTGCGCAGAAGTTCTGAAGAGGAGCCAGGGGAGCTAAGTGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561797.1
ENST00000562258.5
CDS CCA 72 bp TCCTCTCGTGGCCTTTCAGAGGGGAGTTGGCTTTCTTaGACTGGTCCACGAGCACCTGCAGAGCTTTCTCGT +
Preference number: 6 (lower is better)
Translates to: SSRGLSEGSWLS*TGPRAPAELSR
Trigger: ACGAGAAAGCTCTGCAGGTGCTCGTGGACCAGTCCAAGAAAGCCAACTCCCCTCTGAAAGGCCACGAGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318006.10
ENST00000348544.4
ENST00000563692.1
CDS GCA 72 bp CCTGGGGCCAACCGGCTTCCTAAAAGAACTGGTACCTaGAGGGAAGGACAGGAGATACTCCTTCATCAGACC +
Preference number: 6 (lower is better)
Translates to: PGANRLPKRTGT*REGQEILLHQT
Trigger: GGTCTGATGAAGGAGTATCTCCTGTCCTTCCCTGCAGGTACCAGTTCTTTTAGGAAGCCGGTTGGCCCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561797.1
ENST00000562258.5
CDS CAA 90 bp GAATGGCACACAACCTCAACCCAAAGTGGGAAACAGCAGCTACTGTaGGTCTCACCCATGGCCACTGGTATGTCCGTCCAGTTCAGGGCA +
Preference number: 6 (lower is better)
Translates to: EWHTTSTQSGKQQLL*VSPMATGMSVQFRA
Trigger: TGCCCTGAACTGGACGGACATACCAGTGGCCATGGGTGAGACCAACAGTAGCTGCTGTTTCCCACTTTGGGTTGAGGTTGTGTGCCATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570062.1
CDS CCA 72 bp CTCTCTGCAGGGCCTGCTTTTAGACTGCTTAGGAGGTaGGATGTTGGGGCAAACTTACTCCTCAGCCATCCT +
Preference number: 6 (lower is better)
Translates to: LSAGPAFRLLRR*DVGANLLLSHP
Trigger: AGGATGGCTGAGGAGTAAGTTTGCCCCAACATCCCACCTCCTAAGCAGTCTAAAAGCAGGCCCTGCAGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561818.1
CDS CCA 72 bp CGTTCTGCAGGAATGGCACACAACCTCAACCCAAAGTaGGAAACAGCAGCTACTGTTGGTCTCACCCATGGC +
Preference number: 6 (lower is better)
Translates to: RSAGMAHNLNPK*ETAATVGLTHG
Trigger: GCCATGGGTGAGACCAACAGTAGCTGCTGTTTCCCACTTTGGGTTGAGGTTGTGTGCCATTCCTGCAGAACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570062.1
CDS CAA 72 bp TTCAGGGCACATTTCTGTGTGCAGATCCCTTCCTCATaGAGTACCACGGTGAGATCATCCTGGCCCACAGCC +
Preference number: 6 (lower is better)
Translates to: FRAHFCVQIPSS*STTVRSSWPTA
Trigger: GGCTGTGGGCCAGGATGATCTCACCGTGGTACTCAATGAGGAAGGGATCTGCACACAGAAATGTGCCCTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318006.10
ENST00000348544.4
ENST00000570062.1
CDS CAA 72 bp CCTTGCACCTTCTCACAGTATAGCTGGATCAGGCAGTaGTGGAACCGAGAGCCTGTCTCCTCCCAAACATGG +
Preference number: 6 (lower is better)
Translates to: PCTFSQYSWIRQ*WNREPVSSQTW
Trigger: CCATGTTTGGGAGGAGACAGGCTCTCGGTTCCACAACTGCCTGATCCAGCTATACTGTGAGAAGGTGCAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318006.10
ENST00000348544.4
ENST00000561797.1
ENST00000562258.5
ENST00000563692.1
CDS CAA 90 bp TCCGTCCAGTTCAGGGCACATTTCTGTGTGCAGATCCCTTCCTCATaGAGTACCACGGTGAGATCATCCTGGCCCACAGCCACTTTTCCA +
Preference number: 6 (lower is better)
Translates to: SVQFRAHFCVQIPSS*STTVRSSWPTATFP
Trigger: TGGAAAAGTGGCTGTGGGCCAGGATGATCTCACCGTGGTACTCAATGAGGAAGGGATCTGCACACAGAAATGTGCCCTGAACTGGACGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318006.10
ENST00000348544.4
ENST00000570062.1
CDS TCA 72 bp GAAGAAAATGGCTTGGGAGTGAGGACTGCTTCTAAGTaGCCACTTCTCTGGCAGCGGCACCTCCTACAGAAG +
Preference number: 6 (lower is better)
Translates to: EENGLGVRTASK*PLLWQRHLLQK
Trigger: CTTCTGTAGGAGGTGCCGCTGCCAGAGAAGTGGTCACTTAGAAGCAGTCCTCACTCCCAAGCCATTTTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614932.1
CDS GCA 72 bp AAATGCAGGTTTTCTGTGCCCAGATGCTGCAGATACTaGACTGTCCTCTCGTGGCCTTTCAGAGGGGAGTTG +
Preference number: 6 (lower is better)
Translates to: KCRFSVPRCCRY*TVLSWPFRGEL
Trigger: CAACTCCCCTCTGAAAGGCCACGAGAGGACAGTGCAGTATCTGCAGCATCTGGGCACAGAAAACCTGCATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318006.10
ENST00000348544.4
ENST00000563692.1
CDS CCA 72 bp TGCACCTTCTCACAGTATAGCTGGATCAGGCAGTTGTaGAACCGAGAGCCTGTCTCCTCCCAAACATGGATG +
Preference number: 6 (lower is better)
Translates to: CTFSQYSWIRQL*NREPVSSQTWM
Trigger: CATCCATGTTTGGGAGGAGACAGGCTCTCGGTTCCACAACTGCCTGATCCAGCTATACTGTGAGAAGGTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318006.10
ENST00000348544.4
ENST00000561797.1
ENST00000562258.5
ENST00000563692.1
CDS CCA 72 bp TCCTTCATCAGACCTTGCACCTTCTCACAGTATAGCTaGATCAGGCAGTTGTGGAACCGAGAGCCTGTCTCC +
Preference number: 6 (lower is better)
Translates to: SFIRPCTFSQYS*IRQLWNREPVS
Trigger: GGAGACAGGCTCTCGGTTCCACAACTGCCTGATCCAGCTATACTGTGAGAAGGTGCAAGGTCTGATGAAGGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318006.10
ENST00000348544.4
ENST00000561797.1
ENST00000562258.5
ENST00000563692.1
CDS CCA 72 bp GATGTGTTCCTGAGGCAAGATGTAGGTCTTTGTCACTaGTATTCTCCAGGCTGTGACCTGGTCTCCCAGCCT +
Preference number: 6 (lower is better)
Translates to: DVFLRQDVGLCH*YSPGCDLVSQP
Trigger: AGGCTGGGAGACCAGGTCACAGCCTGGAGAATACCAGTGACAAAGACCTACATCTTGCCTCAGGAACACATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562258.5
CDS CAA 72 bp CAGGGCCTGCTTTTAGACTGCTTAGGAGGTGGGATGTaGGGGCAAACTTACTCCTCAGCCATCCTTGTATCC +
Preference number: 6 (lower is better)
Translates to: QGLLLDCLGGGM*GQTYSSAILVS
Trigger: GGATACAAGGATGGCTGAGGAGTAAGTTTGCCCCAACATCCCACCTCCTAAGCAGTCTAAAAGCAGGCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561818.1
CDS CAA 90 bp TTGAGCAGGGTGGTGTCGATGATTTGTAGCAGCTTCTTCTTGGATTaGATGGTGGGAGTGCCTTCCATGAGCGGTGAGGTGCTTGACTGG +
Preference number: 6 (lower is better)
Translates to: LSRVVSMICSSFFLD*MVGVPSMSGEVLDW
Trigger: CCAGTCAAGCACCTCACCGCTCATGGAAGGCACTCCCACCATCAAATCCAAGAAGAAGCTGCTACAAATCATCGACACCACCCTGCTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318006.10
ENST00000348544.4
CDS CAA 90 bp GATTGCGAGCTGCAGAGCCAATTCAAACTGCTTGTCCTGGAGAAGTaGTTGGATTTGGGTTGCCATGGGGACAGGGATGAGTCTCCAAAC +
Preference number: 6 (lower is better)
Translates to: DCELQSQFKLLVLEK*LDLGCHGDRDESPN
Trigger: GTTTGGAGACTCATCCCTGTCCCCATGGCAACCCAAATCCAACAACTTCTCCAGGACAAGCAGTTTGAATTGGCTCTGCAGCTCGCAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568029.5
CDS TCA 72 bp GGCCTGGATCATAGTAGCTGGAAATCTCCAAGAACATaGGGAGCTTTTGCCGGTATTCTCCCAGCTCACCCT +
Preference number: 6 (lower is better)
Translates to: GLDHSSWKSPRT*GAFAGILPAHP
Trigger: AGGGTGAGCTGGGAGAATACCGGCAAAAGCTCCTCATGTTCTTGGAGATTTCCAGCTACTATGATCCAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318006.10
ENST00000348544.4
ENST00000561818.1
ENST00000562258.5
CDS GCA 72 bp GCAGGGAAGGACAGGAGATACTCCTTCATCAGACCTTaGACCTTCTCACAGTATAGCTGGATCAGGCAGTTG +
Preference number: 6 (lower is better)
Translates to: AGKDRRYSFIRP*TFSQYSWIRQL
Trigger: CAACTGCCTGATCCAGCTATACTGTGAGAAGGTGCAAGGTCTGATGAAGGAGTATCTCCTGTCCTTCCCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318006.10
ENST00000348544.4
ENST00000561797.1
ENST00000562258.5
ENST00000563692.1
CDS GCA 72 bp ATGGGTGGGATTGCGAGCTGCAGAGCCAATTCAAACTaGTTGTCCTGGAGAAGTTGTTGGATTTGGGTTGCC +
Preference number: 6 (lower is better)
Translates to: MGGIASCRANSN*LSWRSCWIWVA
Trigger: GGCAACCCAAATCCAACAACTTCTCCAGGACAAGCAGTTTGAATTGGCTCTGCAGCTCGCAATCCCACCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568029.5
CDS CAA 72 bp CCCACACAGATAGAATTTTCACACCACGCCATGGACTaGGGCACATCTGGCACACTAAAGTCCCCCTGCAAT +
Preference number: 6 (lower is better)
Translates to: PTQIEFSHHAMD*GTSGTLKSPCN
Trigger: ATTGCAGGGGGACTTTAGTGTGCCAGATGTGCCCAAGTCCATGGCGTGGTGTGAAAATTCTATCTGTGTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318006.10
ENST00000348544.4
ENST00000570062.1
CDS CAA 72 bp TGGGCAAACCTGTTTCTTATCAGTATAGCTGTCATCTaGCAGACAGGTCTGTTCCTTCCACCCTCCCCGAGG +
Preference number: 6 (lower is better)
Translates to: WANLFLISIAVI*QTGLFLPPSPR
Trigger: CCTCGGGGAGGGTGGAAGGAACAGACCTGTCTGCAAGATGACAGCTATACTGATAAGAAACAGGTTTGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561797.1
ENST00000562258.5
CDS CAA 72 bp GGTGGGATTGCGAGCTGCAGAGCCAATTCAAACTGCTaGTCCTGGAGAAGTTGTTGGATTTGGGTTGCCATG +
Preference number: 6 (lower is better)
Translates to: GGIASCRANSNC*SWRSCWIWVAM
Trigger: CATGGCAACCCAAATCCAACAACTTCTCCAGGACAAGCAGTTTGAATTGGCTCTGCAGCTCGCAATCCCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568029.5
CDS CAA 90 bp TGCGAGCTGCAGAGCCAATTCAAACTGCTTGTCCTGGAGAAGTTGTaGGATTTGGGTTGCCATGGGGACAGGGATGAGTCTCCAAACAAA +
Preference number: 6 (lower is better)
Translates to: CELQSQFKLLVLEKL*DLGCHGDRDESPNK
Trigger: TTTGTTTGGAGACTCATCCCTGTCCCCATGGCAACCCAAATCCAACAACTTCTCCAGGACAAGCAGTTTGAATTGGCTCTGCAGCTCGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318006.10
ENST00000348544.4
ENST00000568029.5
ENST00000570023.1
CDS CAA 90 bp TTCATCAGACCTTGCACCTTCTCACAGTATAGCTGGATCAGGCAGTaGTGGAACCGAGAGCCTGTCTCCTCCCAAACATGGATGATGTGT +
Preference number: 6 (lower is better)
Translates to: FIRPCTFSQYSWIRQ*WNREPVSSQTWMMC
Trigger: ACACATCATCCATGTTTGGGAGGAGACAGGCTCTCGGTTCCACAACTGCCTGATCCAGCTATACTGTGAGAAGGTGCAAGGTCTGATGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318006.10
ENST00000348544.4
ENST00000561797.1
ENST00000562258.5
ENST00000563692.1
CDS CAA 90 bp ATCTCTCTGCAGGGCCTGCTTTTAGACTGCTTAGGAGGTGGGATGTaGGGGCAAACTTACTCCTCAGCCATCCTTGTATCCTTCAAGATG +
Preference number: 6 (lower is better)
Translates to: ISLQGLLLDCLGGGM*GQTYSSAILVSFKM
Trigger: CATCTTGAAGGATACAAGGATGGCTGAGGAGTAAGTTTGCCCCAACATCCCACCTCCTAAGCAGTCTAAAAGCAGGCCCTGCAGAGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561818.1
CDS CAA 90 bp GATGTAGGGAGGCTGGTGCTCTGTGAAAGAGAACATACACAGCAGTaGTTCCGGTCTAAGGCTTTGGGTTTATGGAGTGTTTCAGCTGCC +
Preference number: 6 (lower is better)
Translates to: DVGRLVLCEREHTQQ*FRSKALGLWSVSAA
Trigger: GGCAGCTGAAACACTCCATAAACCCAAAGCCTTAGACCGGAACAACTGCTGTGTATGTTCTCTTTCACAGAGCACCAGCCTCCCTACATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568029.5
CDS TCA 72 bp TCCCATCCAGATTATCCCCTAATCGGGCTGCAAAGATaGCTAAGAGACAGCTCGTCTAAAGCCACCAGGAAG +
Preference number: 6 (lower is better)
Translates to: SHPDYPLIGLQR*LRDSSSKATRK
Trigger: CTTCCTGGTGGCTTTAGACGAGCTGTCTCTTAGTCATCTTTGCAGCCCGATTAGGGGATAATCTGGATGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562258.5
CDS GCA 72 bp TTCAAATGTTCGGATCTCAACATATCGAGGCAACACTaGAATGATGTAGGGAGGCTGGTGCTCCATGGCCAC +
Preference number: 6 (lower is better)
Translates to: FKCSDLNISRQH*NDVGRLVLHGH
Trigger: GTGGCCATGGAGCACCAGCCTCCCTACATCATTGCAGTGTTGCCTCGATATGTTGAGATCCGAACATTTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318006.10
ENST00000348544.4
CDS CCA 72 bp ATTGCGAGCTGCAGAGCCAATTCAAACTGCTTGTCCTaGAGAAGTTGTTGGATTTGGGTTGCCATGGGGACA +
Preference number: 6 (lower is better)
Translates to: IASCRANSNCLS*RSCWIWVAMGT
Trigger: TGTCCCCATGGCAACCCAAATCCAACAACTTCTCCAGGACAAGCAGTTTGAATTGGCTCTGCAGCTCGCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568029.5
CDS CAA 90 bp GAATCATCTTTCATTTCTGCGAGCTGCAGAGCCAATTCAAACTGCTaGTCCTGGAGAAGTTGTTGGATTTGGGTTGCCATGGGGACAGGG +
Preference number: 6 (lower is better)
Translates to: ESSFISASCRANSNC*SWRSCWIWVAMGTG
Trigger: CCCTGTCCCCATGGCAACCCAAATCCAACAACTTCTCCAGGACAAGCAGTTTGAATTGGCTCTGCAGCTCGCAGAAATGAAAGATGATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318006.10
ENST00000348544.4
ENST00000570023.1
CDS CAA 90 bp AATACTCTGTGGGCAAACCTGTTTCTTATCAGTATAGCTGTCATCTaGCAGACAGGTCTGTTCCTTCCACCCTCCCCGAGGGATGACTCT +
Preference number: 6 (lower is better)
Translates to: NTLWANLFLISIAVI*QTGLFLPPSPRDDS
Trigger: AGAGTCATCCCTCGGGGAGGGTGGAAGGAACAGACCTGTCTGCAAGATGACAGCTATACTGATAAGAAACAGGTTTGCCCACAGAGTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561797.1
ENST00000562258.5
CDS TCA 72 bp TGTCACTTCAAATCTGTTGCAACTGCCGCTTTCAGGTaGTGCTACATCTGCTGGCACAACGTCCTTCCGAAT +
Preference number: 6 (lower is better)
Translates to: CHFKSVATAAFR*CYICWHNVLPN
Trigger: ATTCGGAAGGACGTTGTGCCAGCAGATGTAGCATCACCTGAAAGCGGCAGTTGCAACAGATTTGAAGTGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000348544.4
CDS CAA 90 bp CTGCAGAGCCAATTCAAACTGCTTGTCCTGGAGAAGTTGTTGGATTaGGGTTGCCATGGGGACAGGGATGAGTCTCCAAACAAAATGATT +
Preference number: 6 (lower is better)
Translates to: LQSQFKLLVLEKLLD*GCHGDRDESPNKMI
Trigger: AATCATTTTGTTTGGAGACTCATCCCTGTCCCCATGGCAACCCAAATCCAACAACTTCTCCAGGACAAGCAGTTTGAATTGGCTCTGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318006.10
ENST00000348544.4
ENST00000568029.5
ENST00000570023.1
CDS TCA 72 bp TTCTTCTCATACAGGATGATAAGCTCACTGTACTTGTaGGCCTTCTTTAGCACGTGCTCGCTCTCCTCGATG +
Preference number: 6 (lower is better)
Translates to: FFSYRMISSLYL*AFFSTCSLSSM
Trigger: CATCGAGGAGAGCGAGCACGTGCTAAAGAAGGCTCACAAGTACAGTGAGCTTATCATCCTGTATGAGAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318006.10
ENST00000348544.4
ENST00000563692.1
CDS TCA 72 bp GTTCTTCTAAGAGGCCATCAAAGGGAAAATCACAGATaGGCCGGCCTGGATCATAGTAGCTGGAAATCTCCA +
Preference number: 6 (lower is better)
Translates to: VLLRGHQRENHR*AGLDHSSWKSP
Trigger: TGGAGATTTCCAGCTACTATGATCCAGGCCGGCTCATCTGTGATTTTCCCTTTGATGGCCTCTTAGAAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318006.10
ENST00000348544.4
ENST00000561818.1
ENST00000562258.5
CDS GCA 72 bp TCTTTCATTTCTGCGAGCTGCAGAGCCAATTCAAACTaGTTGTCCTGGAGAAGTTGTTGGATTTGGGTTGCC +
Preference number: 6 (lower is better)
Translates to: SFISASCRANSN*LSWRSCWIWVA
Trigger: GGCAACCCAAATCCAACAACTTCTCCAGGACAAGCAGTTTGAATTGGCTCTGCAGCTCGCAGAAATGAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318006.10
ENST00000348544.4
ENST00000570023.1
CDS CCA 72 bp GAGGTAATGAAACGGGGCCTTTGCAATTCAATGCTTTaGACCAGAAGCCTCGGTTCAAATGTTCGGATCTCA +
Preference number: 6 (lower is better)
Translates to: EVMKRGLCNSML*TRSLGSNVRIS
Trigger: TGAGATCCGAACATTTGAACCGAGGCTTCTGGTCCAAAGCATTGAATTGCAAAGGCCCCGTTTCATTACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318006.10
ENST00000348544.4
ENST00000568029.5
CDS CAA 72 bp AGGCTGGTGCTCTGTGAAAGAGAACATACACAGCAGTaGTTCCGGTCTAAGGCTTTGGGTTTATGGAGTGTT +
Preference number: 6 (lower is better)
Translates to: RLVLCEREHTQQ*FRSKALGLWSV
Trigger: AACACTCCATAAACCCAAAGCCTTAGACCGGAACAACTGCTGTGTATGTTCTCTTTCACAGAGCACCAGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568029.5
CDS TCA 72 bp CAGCCATCCTTGTATCCTTCAAGATGTGGACATAAATaGAAAGAGCTTGTTCATGTTTCCCCATGCGCCCCA +
Preference number: 6 (lower is better)
Translates to: QPSLYPSRCGHK*KELVHVSPCAP
Trigger: TGGGGCGCATGGGGAAACATGAACAAGCTCTTTTCATTTATGTCCACATCTTGAAGGATACAAGGATGGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318006.10
ENST00000348544.4
ENST00000561818.1
ENST00000562258.5
CDS GCA 72 bp TTCAAATGTTCGGATCTCAACATATCGAGGCAACACTaGAATGATGTAGGGAGGCTGGTGCTCTGTGAAAGA +
Preference number: 6 (lower is better)
Translates to: FKCSDLNISRQH*NDVGRLVLCER
Trigger: TCTTTCACAGAGCACCAGCCTCCCTACATCATTGCAGTGTTGCCTCGATATGTTGAGATCCGAACATTTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568029.5
CDS CCA 72 bp CCTCTTTGGAACAGAAGTAATGGACGACCACTCCATTaGGGTATCTTGCAAATGCACTGTTCCCAATCTTCT +
Preference number: 6 (lower is better)
Translates to: PLWNRSNGRPLH*GILQMHCSQSS
Trigger: AGAAGATTGGGAACAGTGCATTTGCAAGATACCCCAATGGAGTGGTCGTCCATTACTTCTGTTCCAAAGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318006.10
ENST00000348544.4
ENST00000562258.5
CDS CCA 72 bp AAATCTGAACAGCCCGATAACAGAACCACGCAGTCCTaGATCCTGGGTTTAAAGCTTTTTAGTGCAGACCAA +
Preference number: 6 (lower is better)
Translates to: KSEQPDNRTTQS*ILGLKLFSADQ
Trigger: TTGGTCTGCACTAAAAAGCTTTAAACCCAGGATCCAGGACTGCGTGGTTCTGTTATCGGGCTGTTCAGATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562258.5
CDS CCA 72 bp GAGAACATACACAGCAGTTGTTCCGGTCTAAGGCTTTaGGTTTATGGAGTGTTTCAGCTGCCCATTCTAAGA +
Preference number: 6 (lower is better)
Translates to: ENIHSSCSGLRL*VYGVFQLPILR
Trigger: TCTTAGAATGGGCAGCTGAAACACTCCATAAACCCAAAGCCTTAGACCGGAACAACTGCTGTGTATGTTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568029.5
CDS CAA 72 bp AGAGAACATACACAGCAGTTGTTCCGGTCTAAGGCTTaGGGTTTATGGAGTGTTTCAGCTGCCCATTCTAAG +
Preference number: 6 (lower is better)
Translates to: REHTQQLFRSKA*GLWSVSAAHSK
Trigger: CTTAGAATGGGCAGCTGAAACACTCCATAAACCCAAAGCCTTAGACCGGAACAACTGCTGTGTATGTTCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568029.5
CDS TCA 72 bp AGCCACCAGGAAGTTTCACAATGCGACCCAGTAACGTaGGGAGCCATCTTCTCAATTACTAAACTCCATTTT +
Preference number: 6 (lower is better)
Translates to: SHQEVSQCDPVT*GAIFSITKLHF
Trigger: AAAATGGAGTTTAGTAATTGAGAAGATGGCTCCTCACGTTACTGGGTCGCATTGTGAAACTTCCTGGTGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562258.5
CDS CCA 72 bp TTAGCAAAGACCTGCATGGACTCATCAAAACGCTTCTaGCAGAAGAGGTTGAAGGCATACAAGTTCTTGATG +
Preference number: 6 (lower is better)
Translates to: LAKTCMDSSKRF*QKRLKAYKFLM
Trigger: CATCAAGAACTTGTATGCCTTCAACCTCTTCTGCCAGAAGCGTTTTGATGAGTCCATGCAGGTCTTTGCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318006.10
ENST00000348544.4
ENST00000570023.1
CDS CCA 72 bp CTTCCTTATAAGAACTTTCTGCAGACCTACATCTCTTaGGCACCCACTATATCAGGTTCTAGCTTCAAGAGG +
Preference number: 6 (lower is better)
Translates to: LPYKNFLQTYIS*APTISGSSFKR
Trigger: CCTCTTGAAGCTAGAACCTGATATAGTGGGTGCCCAAGAGATGTAGGTCTGCAGAAAGTTCTTATAAGGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614932.1
CDS TCA 72 bp GGCTCAGGATCCTACTTGAGTCACAATGCAGTAGCTTaGAAGATCTTTTTCTTCCTTCACTGGATCTTCCTT +
Preference number: 6 (lower is better)
Translates to: GSGSYLSHNAVA*KIFFFLHWIFL
Trigger: AAGGAAGATCCAGTGAAGGAAGAAAAAGATCTTTCAAGCTACTGCATTGTGACTCAAGTAGGATCCTGAGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614932.1
CDS GCA 72 bp TTATGGACAAGAATCCAACAGCTCCATACCATACATTaGAGGTCTTTAAATTCTCGAAGCCCACTCCCAACA +
Preference number: 6 (lower is better)
Translates to: LWTRIQQLHTIH*RSLNSRSPLPT
Trigger: TGTTGGGAGTGGGCTTCGAGAATTTAAAGACCTGCAATGTATGGTATGGAGCTGTTGGATTCTTGTCCATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614932.1
CDS GCA 72 bp TTCTTCCTTCACTGGATCTTCCTTATAAGAACTTTCTaGAGACCTACATCTCTTGGGCACCCACTATATCAG +
Preference number: 6 (lower is better)
Translates to: FFLHWIFLIRTF*RPTSLGHPLYQ
Trigger: CTGATATAGTGGGTGCCCAAGAGATGTAGGTCTGCAGAAAGTTCTTATAAGGAAGATCCAGTGAAGGAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614932.1
CDS CAA 72 bp GTAGTTTACCTAGATTTGGTAGGTAGCATTTCCAGCTaGGTCTACTGGGATCTTTTTCTTCAGAGGAAGCTG +
Preference number: 6 (lower is better)
Translates to: VVYLDLVGSISS*VYWDLFLQRKL
Trigger: CAGCTTCCTCTGAAGAAAAAGATCCCAGTAGACCAAGCTGGAAATGCTACCTACCAAATCTAGGTAAACTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562258.5
CDS CAA 72 bp TGGCTCAGGATCCTACTTGAGTCACAATGCAGTAGCTaGAAAGATCTTTTTCTTCCTTCACTGGATCTTCCT +
Preference number: 6 (lower is better)
Translates to: WLRILLESQCSS*KDLFLPSLDLP
Trigger: AGGAAGATCCAGTGAAGGAAGAAAAAGATCTTTCAAGCTACTGCATTGTGACTCAAGTAGGATCCTGAGCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614932.1
CDS CAA 90 bp CTCTGTGAAAGAGAACATACACAGCAGTTGTTCCGGTCTAAGGCTTaGGGTTTATGGAGTGTTTCAGCTGCCCATTCTAAGATACATTTA +
Preference number: 6 (lower is better)
Translates to: LCEREHTQQLFRSKA*GLWSVSAAHSKIHL
Trigger: TAAATGTATCTTAGAATGGGCAGCTGAAACACTCCATAAACCCAAAGCCTTAGACCGGAACAACTGCTGTGTATGTTCTCTTTCACAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568029.5
CDS TCA 72 bp CTCAGGAATTCTGCATGGAGAAGGTTCTTGAGCACTTaGTTGAACCGTTTCTTTTGTGCATTTTCTTCCAAG +
Preference number: 6 (lower is better)
Translates to: LRNSAWRRFLST*LNRFFCAFSSK
Trigger: CTTGGAAGAAAATGCACAAAAGAAACGGTTCAATCAAGTGCTCAAGAACCTTCTCCATGCAGAATTCCTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318006.10
ENST00000348544.4
ENST00000562258.5
ENST00000562662.1
ENST00000568755.1
CDS CAA 72 bp CCTCAGGAATTCTGCATGGAGAAGGTTCTTGAGCACTaGATTGAACCGTTTCTTTTGTGCATTTTCTTCCAA +
Preference number: 6 (lower is better)
Translates to: PQEFCMEKVLEH*IEPFLLCIFFQ
Trigger: TTGGAAGAAAATGCACAAAAGAAACGGTTCAATCAAGTGCTCAAGAACCTTCTCCATGCAGAATTCCTGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318006.10
ENST00000348544.4
ENST00000562258.5
ENST00000562662.1
ENST00000568755.1