RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for VPS33B (Homo sapiens)

Ensembl gene IDs: ENSG00000184056

Ensembl transcript IDs: ENST00000333371.8, ENST00000535906.1, ENST00000554264.5, ENST00000554660.1, ENST00000556096.6, ENST00000557358.1, ENST00000557470.5, ENST00000574755.5

Found 381 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TTGCTCACTTTACTCTCCACGGCTGTGAGGGTGTCCCCGGGGGCCTaGTCCGTTAGGAGCCCAGCTCTTCGCAGATTGGAGAAGGTTAGC +
Preference number: 1 (lower is better)
Translates to: LLTLLSTAVRVSPGA*SVRSPALRRLEKVS
Trigger: GCTAACCTTCTCCAATCTGCGAAGAGCTGGGCTCCTAACGGAGCAGGCCCCCGGGGACACCCTCACAGCCGTGGAGAGTAAAGTGAGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574755.5
3UTR CCA 90 bp TGTCCCCGGGGGCCTGCTCCGTTAGGAGCCCAGCTCTTCGCAGATTaGAGAAGGTTAGCAGGTGCTCAGGGCCATAGCTCTGCAGATACT +
Preference number: 1 (lower is better)
Translates to: CPRGPAPLGAQLFAD*RRLAGAQGHSSADT
Trigger: AGTATCTGCAGAGCTATGGCCCTGAGCACCTGCTAACCTTCTCCAATCTGCGAAGAGCTGGGCTCCTAACGGAGCAGGCCCCCGGGGACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574755.5
3UTR GCA 90 bp TCCTGTTTCAGGCCCTTGAGCTCCTGGGACACGAAATTCTTCATCTaGTTAATGTCCATGCCTCTCCGGCGATCATACTGGGCCTGCAAG +
Preference number: 1 (lower is better)
Translates to: SCFRPLSSWDTKFFI*LMSMPLRRSYWACK
Trigger: CTTGCAGGCCCAGTATGATCGCCGGAGAGGCATGGACATTAAGCAGATGAAGAATTTCGTGTCCCAGGAGCTCAAGGGCCTGAAACAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574755.5
3UTR CCA 90 bp TCCCGGCTCTTAGCAGGTAGTTGGTGGACACTTGGTTATAGCAGCTaGGTGCCAGATGCCTGCATCTCACTGAGGAATGTGTTCAGGGAA +
Preference number: 1 (lower is better)
Translates to: SRLLAGSWWTLGYSS*VPDACISLRNVFRE
Trigger: TTCCCTGAACACATTCCTCAGTGAGATGCAGGCATCTGGCACCCAGCTGCTATAACCAAGTGTCCACCAACTACCTGCTAAGAGCCGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
3UTR CCA 90 bp AAATCCCAACACGTTCCATGCTCCCGGCTCTTAGCAGGTAGTTGGTaGACACTTGGTTATAGCAGCTGGGTGCCAGATGCCTGCATCTCA +
Preference number: 1 (lower is better)
Translates to: KSQHVPCSRLLAGSW*TLGYSSWVPDACIS
Trigger: TGAGATGCAGGCATCTGGCACCCAGCTGCTATAACCAAGTGTCCACCAACTACCTGCTAAGAGCCGGGAGCATGGAACGTGTTGGGATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
3UTR CCA 90 bp TCTAAATCCCAACACGTTCCATGCTCCCGGCTCTTAGCAGGTAGTTaGTGGACACTTGGTTATAGCAGCTGGGTGCCAGATGCCTGCATC +
Preference number: 1 (lower is better)
Translates to: SKSQHVPCSRLLAGS*WTLGYSSWVPDACI
Trigger: GATGCAGGCATCTGGCACCCAGCTGCTATAACCAAGTGTCCACCAACTACCTGCTAAGAGCCGGGAGCATGGAACGTGTTGGGATTTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
3UTR TCA 90 bp GGACACTTGGTTATAGCAGCTGGGTGCCAGATGCCTGCATCTCACTaGGGAATGTGTTCAGGGAAGATGTCAACACTGGCCGGGAAAAAC +
Preference number: 1 (lower is better)
Translates to: GHLVIAAGCQMPASH*GMCSGKMSTLAGKN
Trigger: GTTTTTCCCGGCCAGTGTTGACATCTTCCCTGAACACATTCCTCAGTGAGATGCAGGCATCTGGCACCCAGCTGCTATAACCAAGTGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
3UTR GCA 90 bp GGTAGTTGGTGGACACTTGGTTATAGCAGCTGGGTGCCAGATGCCTaGATCTCACTGAGGAATGTGTTCAGGGAAGATGTCAACACTGGC +
Preference number: 1 (lower is better)
Translates to: GSWWTLGYSSWVPDA*ISLRNVFREDVNTG
Trigger: GCCAGTGTTGACATCTTCCCTGAACACATTCCTCAGTGAGATGCAGGCATCTGGCACCCAGCTGCTATAACCAAGTGTCCACCAACTACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
3UTR CCA 90 bp CACAAAGTCCACATCTCTGTCCAAGAGAAAGATATGTCCAATCTCTaGCCTTCGGCCCTTGGTTTCGCCATCCTCCTCCTCCTCCAGGTT +
Preference number: 1 (lower is better)
Translates to: HKVHISVQEKDMSNL*PSALGFAILLLLQV
Trigger: AACCTGGAGGAGGAGGAGGATGGCGAAACCAAGGGCCGAAGGCCAGAGATTGGACATATCTTTCTCTTGGACAGAGATGTGGACTTTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574755.5
3UTR CCA 90 bp TGCCTGCATCTCACTGAGGAATGTGTTCAGGGAAGATGTCAACACTaGCCGGGAAAAACATCAGGCTTTCACCTCACTCATGGCCTCCAT +
Preference number: 1 (lower is better)
Translates to: CLHLTEECVQGRCQH*PGKTSGFHLTHGLH
Trigger: ATGGAGGCCATGAGTGAGGTGAAAGCCTGATGTTTTTCCCGGCCAGTGTTGACATCTTCCCTGAACACATTCCTCAGTGAGATGCAGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574755.5
3UTR GCA 90 bp AAGTTCCGGGCCTTCTGGCTCAAGAAGCCAAAGACATTGGAGAAGTaGTCGTTCCGAATCTCATTAAACACCTTGTCCTCGGCATTGAGT +
Preference number: 1 (lower is better)
Translates to: KFRAFWLKKPKTLEK*SFRISLNTLSSALS
Trigger: ACTCAATGCCGAGGACAAGGTGTTTAATGAGATTCGGAACGAGCACTTCTCCAATGTCTTTGGCTTCTTGAGCCAGAAGGCCCGGAACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574755.5
3UTR GCA 90 bp CCCTCTAGCAGTGCATGCTCAGTCTTGATTAGCTCCTGGAAATCCTaGTTGGTTTTCTTCTTCATGATGGATTCACAGGCCCCAATATGG +
Preference number: 1 (lower is better)
Translates to: PSSSACSVLISSWKS*LVFFFMMDSQAPIW
Trigger: CCATATTGGGGCCTGTGAATCCATCATGAAGAAGAAAACCAAGCAGGATTTCCAGGAGCTAATCAAGACTGAGCATGCACTGCTAGAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574755.5
3UTR CCA 90 bp ATGTTGAACCCCTCTAGCAGTGCATGCTCAGTCTTGATTAGCTCCTaGAAATCCTGCTTGGTTTTCTTCTTCATGATGGATTCACAGGCC +
Preference number: 1 (lower is better)
Translates to: MLNPSSSACSVLISS*KSCLVFFFMMDSQA
Trigger: GGCCTGTGAATCCATCATGAAGAAGAAAACCAAGCAGGATTTCCAGGAGCTAATCAAGACTGAGCATGCACTGCTAGAGGGGTTCAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574755.5
3UTR GCA 90 bp GAACTCTTTTCTCAGATAATGTTCTCTAAATCCCAACACGTTCCATaGTCCCGGCTCTTAGCAGGTAGTTGGTGGACACTTGGTTATAGC +
Preference number: 1 (lower is better)
Translates to: ELFSQIMFSKSQHVP*SRLLAGSWWTLGYS
Trigger: GCTATAACCAAGTGTCCACCAACTACCTGCTAAGAGCCGGGAGCATGGAACGTGTTGGGATTTAGAGAACATTATCTGAGAAAAGAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
3UTR-3UTR GCA 90 bp CTGATGGCACGAAAATTGCTCCTCTTGGCCAGAGAACTGAAGGCATCAGTAATCGTGTCCCCGGGGGCCTaGTCCGTTAGGAGCCCAGCT +
Preference number: 2 (lower is better)
Translates to: LMARKLLLLARELKASVIVSPGA*SVRSPA
Trigger: AGCTGGGCTCCTAACGGAGCAGGCCCCCGGGGACAC...GATTACTGATGCCTTCAGTTCTCTGGCCAAGAGGAGCAATTTTCGTGCCATCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000574755.5
3UTR-3UTR GCA 90 bp TCCCAACACGTTCCATGCTCCCGGCTCTTAGCAGGTAGTTGGTGGACACTTGGTTGGGTGCCAGATGCCTaGATCTCACTGAGGAATGTG +
Preference number: 2 (lower is better)
Translates to: SQHVPCSRLLAGSWWTLGWVPDA*ISLRNV
Trigger: CACATTCCTCAGTGAGATGCAGGCATCTGGCACCCA...ACCAAGTGTCCACCAACTACCTGCTAAGAGCCGGGAGCATGGAACGTGTTGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
3UTR-3UTR GCA 90 bp GGCGCACCTGCCAATTCCATAGCAGTTTGGAAAGGGTCCATAGAGAGTGCTGAGTCCCAACACGTTCCATaGTCCCGGCTCTTAGCAGGT +
Preference number: 2 (lower is better)
Translates to: GAPANSIAVWKGSIESAESQHVP*SRLLAG
Trigger: ACCTGCTAAGAGCCGGGAGCATGGAACGTGTTGGGA...CTCAGCACTCTCTATGGACCCTTTCCAAACTGCTATGGAATTGGCAGGTGCGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574755.5
3UTR-3UTR GCA 90 bp AAACATCAGGCTTTCACCTCACTCATGGCCTCCATAAGGCGAGCGCTGTTTGTGAGACTCAGCAGGCGGTaGTCCTGTTTCAGGCCCTTG +
Preference number: 2 (lower is better)
Translates to: KHQAFTSLMASIRRALFVRLSRR*SCFRPL
Trigger: CAAGGGCCTGAAACAGGAGCACCGCCTGCTGAGTCT...CACAAACAGCGCTCGCCTTATGGAGGCCATGAGTGAGGTGAAAGCCTGATGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574755.5
3UTR-3UTR CCA 90 bp GATGGACAAAAGGCACATGAGGCGCAGGCTTTCTATAGGCGACACCTGCCGGTCAAGTTCCGGGCCTTCTaGCTCAAGAAGCCAAAGACA +
Preference number: 2 (lower is better)
Translates to: DGQKAHEAQAFYRRHLPVKFRAF*LKKPKT
Trigger: TGTCTTTGGCTTCTTGAGCCAGAAGGCCCGGAACTT...GACCGGCAGGTGTCGCCTATAGAAAGCCTGCGCCTCATGTGCCTTTTGTCCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574755.5
3UTR-3UTR TCA 90 bp TCCCAACACGTTCCATGCTCCCGGCTCTTAGCAGGTAGTTGGTGGACACTTGGTATGCCTGCATCTCACTaGGGAATGTGTTCAGGGAAG +
Preference number: 2 (lower is better)
Translates to: SQHVPCSRLLAGSWWTLGMPASH*GMCSGK
Trigger: CTTCCCTGAACACATTCCTCAGTGAGATGCAGGCAT...ACCAAGTGTCCACCAACTACCTGCTAAGAGCCGGGAGCATGGAACGTGTTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
3UTR-3UTR TCA 90 bp GATGGACAAAAGGCACATGAGGCGCAGGCTTTCTATAGGCGACACCTGCCGGTCGTGCATGCTCAGTCTTaGTTAGCTCCTGGAAATCCT +
Preference number: 2 (lower is better)
Translates to: DGQKAHEAQAFYRRHLPVVHAQS*LAPGNP
Trigger: AGGATTTCCAGGAGCTAATCAAGACTGAGCATGCAC...GACCGGCAGGTGTCGCCTATAGAAAGCCTGCGCCTCATGTGCCTTTTGTCCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574755.5
3UTR-3UTR GCA 90 bp TCCTCCAGGTTCCTCCACAATTCATATGCCATCTTGGCGCACCTGCCAATTCCACAGCTGGGTGCCAGATaGCTGCATCTCACTGAGGAA +
Preference number: 2 (lower is better)
Translates to: SSRFLHNSYAILAHLPIPQLGAR*LHLTEE
Trigger: TTCCTCAGTGAGATGCAGGCATCTGGCACCCAGCTG...TGGAATTGGCAGGTGCGCCAAGATGGCATATGAATTGTGGAGGAACCTGGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574755.5
3UTR CAA 90 bp TGGGCCTGCAAGTTCCGGGCCTTCTGGCTCAAGAAGCCAAAGACATaGGAGAAGTGCTCGTTCCGAATCTCATTAAACACCTTGTCCTCG +
Preference number: 2 (lower is better)
Translates to: WACKFRAFWLKKPKT*EKCSFRISLNTLSS
Trigger: CGAGGACAAGGTGTTTAATGAGATTCGGAACGAGCACTTCTCCAATGTCTTTGGCTTCTTGAGCCAGAAGGCCCGGAACTTGCAGGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574755.5
3UTR-3UTR GCA 90 bp AGCTCCTGGAAATCCTGCTTGGTTTTCTTCTTCATGATGGATTCACAGGCCCCACGATCATACTGGGCCTaGAAGTTCCGGGCCTTCTGG +
Preference number: 2 (lower is better)
Translates to: SSWKSCLVFFFMMDSQAPRSYWA*KFRAFW
Trigger: CCAGAAGGCCCGGAACTTGCAGGCCCAGTATGATCG...TGGGGCCTGTGAATCCATCATGAAGAAGAAAACCAAGCAGGATTTCCAGGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574755.5
3UTR-3UTR CCA 90 bp AGCACCTTCAGGCTCTTGTCAGAGGATGTGACTTCTGGGCCAAAGTCGACACTCGATATGTCCAATCTCTaGCCTTCGGCCCTTGGTTTC +
Preference number: 2 (lower is better)
Translates to: STFRLLSEDVTSGPKSTLDMSNL*PSALGF
Trigger: GAAACCAAGGGCCGAAGGCCAGAGATTGGACATATC...GAGTGTCGACTTTGGCCCAGAAGTCACATCCTCTGACAAGAGCCTGAAGGTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574755.5
3UTR-3UTR CCA 90 bp GATGGACAAAAGGCACATGAGGCGCAGGCTTTCTATAGGCGACACCTGCCGGTCAGAAGCCAAAGACATTaGAGAAGTGCTCGTTCCGAA +
Preference number: 2 (lower is better)
Translates to: DGQKAHEAQAFYRRHLPVRSQRH*RSARSE
Trigger: TTCGGAACGAGCACTTCTCCAATGTCTTTGGCTTCT...GACCGGCAGGTGTCGCCTATAGAAAGCCTGCGCCTCATGTGCCTTTTGTCCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574755.5
3UTR CAA 90 bp TCATTAAACACCTTGTCCTCGGCATTGAGTAGCACCTTCAGGCTCTaGTCAGAGGATGTGACTTCTGGGCCAAAGTCGACACTCCCACAC +
Preference number: 2 (lower is better)
Translates to: SLNTLSSALSSTFRL*SEDVTSGPKSTLPH
Trigger: GTGTGGGAGTGTCGACTTTGGCCCAGAAGTCACATCCTCTGACAAGAGCCTGAAGGTGCTACTCAATGCCGAGGACAAGGTGTTTAATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574755.5
3UTR-3UTR TCA 90 bp CAAGTTCCGGGCCTTCTGGCTCAAGAAGCCAAAGACATTGGAGAAGTGCTCGTTATGCCTGCATCTCACTaGGGAATGTGTTCAGGGAAG +
Preference number: 2 (lower is better)
Translates to: QVPGLLAQEAKDIGEVLVMPASH*GMCSGK
Trigger: CTTCCCTGAACACATTCCTCAGTGAGATGCAGGCAT...AACGAGCACTTCTCCAATGTCTTTGGCTTCTTGAGCCAGAAGGCCCGGAACTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574755.5
3UTR-3UTR GCA 90 bp AAACATCAGGCTTTCACCTCACTCATGGCCTCCATAAGGCGAGCGCTGTTTGTGCCATCTTGGCGCACCTaGCAATTCCATAGCAGTTTG +
Preference number: 2 (lower is better)
Translates to: KHQAFTSLMASIRRALFVPSWRT*QFHSSL
Trigger: CAAACTGCTATGGAATTGGCAGGTGCGCCAAGATGG...CACAAACAGCGCTCGCCTTATGGAGGCCATGAGTGAGGTGAAAGCCTGATGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574755.5
3UTR-3UTR TCA 90 bp TTCTCTAAATCCCAACACGTTCCATGCTCCCGGCTCTTAGCAGGTAGTTGGTGGAGAAGGTGTAAGGCCTaGGCTACAGTGTTGATCCAA +
Preference number: 2 (lower is better)
Translates to: FSKSQHVPCSRLLAGSWWRRCKA*ATVLIQ
Trigger: TTGGATCAACACTGTAGCTCAGGCCTTACACCTTCT...CCACCAACTACCTGCTAAGAGCCGGGAGCATGGAACGTGTTGGGATTTAGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574755.5
3UTR-3UTR CCA 90 bp GGCGCACCTGCCAATTCCATAGCAGTTTGGAAAGGGTCCATAGAGAGTGCTGAGCTCTTAGCAGGTAGTTaGTGGACACTTGGTTATAGC +
Preference number: 2 (lower is better)
Translates to: GAPANSIAVWKGSIESAELLAGS*WTLGYS
Trigger: GCTATAACCAAGTGTCCACCAACTACCTGCTAAGAG...CTCAGCACTCTCTATGGACCCTTTCCAAACTGCTATGGAATTGGCAGGTGCGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574755.5
3UTR-3UTR TCA 90 bp TGTCATCTACTAGGCCCTCATAAACCACTTGGGAGCAAAGTGCTGTCACAAAGTGTCCATAGAGAGTGCTaGGAAGGTGTAAGGCCTGAG +
Preference number: 2 (lower is better)
Translates to: CHLLGPHKPLGSKVLSQSVHREC*EGVRPE
Trigger: CTCAGGCCTTACACCTTCTCAGCACTCTCTATGGAC...ACTTTGTGACAGCACTTTGCTCCCAAGTGGTTTATGAGGGCCTAGTAGATGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574755.5
3UTR-3UTR TCA 90 bp TGGGATCAAATTCAGCTTTTTGCTGATGGCACGAAAATTGCTCCTCTTGGCCAGCGACACTCCCACACTTaGTGCGGAAGGTGTCATCTA +
Preference number: 2 (lower is better)
Translates to: WDQIQLFADGTKIAPLGQRHSHT*CGRCHL
Trigger: TAGATGACACCTTCCGCATCAAGTGTGGGAGTGTCG...CTGGCCAAGAGGAGCAATTTTCGTGCCATCAGCAAAAAGCTGAATTTGATCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574755.5
3UTR-3UTR TCA 90 bp CAAACCATTCTCAGTGATGGACAAAAGGCACATGAGGCGCAGGCTTTCTATAGGTCTTGTCAGAGGATGTaGCTTCTGGGCCAAAGTCGA +
Preference number: 2 (lower is better)
Translates to: QTILSDGQKAHEAQAFYRSCQRM*LLGQSR
Trigger: TCGACTTTGGCCCAGAAGTCACATCCTCTGACAAGA...CCTATAGAAAGCCTGCGCCTCATGTGCCTTTTGTCCATCACTGAGAATGGTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574755.5
3UTR-3UTR GCA 90 bp TTTCAGGCCCTTGAGCTCCTGGGACACGAAATTCTTCATCTGCTTAATGTCCATTGGGTGCCAGATGCCTaGATCTCACTGAGGAATGTG +
Preference number: 2 (lower is better)
Translates to: FQALELLGHEILHLLNVHWVPDA*ISLRNV
Trigger: CACATTCCTCAGTGAGATGCAGGCATCTGGCACCCA...ATGGACATTAAGCAGATGAAGAATTTCGTGTCCCAGGAGCTCAAGGGCCTGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574755.5
3UTR-3UTR CCA 90 bp ACGTGGGATCAAATTCAGCTTTTTGCTGATGGCACGAAAATTGCTCCTCTTGGCCTTGGTTATAGCAGCTaGGTGCCAGATGCCTGCATC +
Preference number: 2 (lower is better)
Translates to: TWDQIQLFADGTKIAPLGLGYSS*VPDACI
Trigger: GATGCAGGCATCTGGCACCCAGCTGCTATAACCAAG...GCCAAGAGGAGCAATTTTCGTGCCATCAGCAAAAAGCTGAATTTGATCCCACGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574755.5
3UTR-3UTR TCA 90 bp AGCACCTTCAGGCTCTTGTCAGAGGATGTGACTTCTGGGCCAAAGTCGACACTCAGAACTTTTGAGGGCTaGAGATCACTTTGTATTTGC +
Preference number: 2 (lower is better)
Translates to: STFRLLSEDVTSGPKSTLRTFEG*RSLCIC
Trigger: GCAAATACAAAGTGATCTTCAGCCCTCAAAAGTTCT...GAGTGTCGACTTTGGCCCAGAAGTCACATCCTCTGACAAGAGCCTGAAGGTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574755.5
3UTR CAA 90 bp GGGATCAAATTCAGCTTTTTGCTGATGGCACGAAAATTGCTCCTCTaGGCCAGAGAACTGAAGGCATCAGTAATCTTTCCTGCAGCCTTG +
Preference number: 2 (lower is better)
Translates to: GIKFSFLLMARKLLL*ARELKASVIFPAAL
Trigger: CAAGGCTGCAGGAAAGATTACTGATGCCTTCAGTTCTCTGGCCAAGAGGAGCAATTTTCGTGCCATCAGCAAAAAGCTGAATTTGATCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574755.5
3UTR-3UTR CCA 90 bp CAAACCATTCTCAGTGATGGACAAAAGGCACATGAGGCGCAGGCTTTCTATAGGATTCATATGCCATCTTaGCGCACCTGCCAATTCCAT +
Preference number: 2 (lower is better)
Translates to: QTILSDGQKAHEAQAFYRIHMPS*RTCQFH
Trigger: ATGGAATTGGCAGGTGCGCCAAGATGGCATATGAAT...CCTATAGAAAGCCTGCGCCTCATGTGCCTTTTGTCCATCACTGAGAATGGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574755.5
3UTR CAA 90 bp TCTAGCAGTGCATGCTCAGTCTTGATTAGCTCCTGGAAATCCTGCTaGGTTTTCTTCTTCATGATGGATTCACAGGCCCCAATATGGAGA +
Preference number: 2 (lower is better)
Translates to: SSSACSVLISSWKSC*VFFFMMDSQAPIWR
Trigger: TCTCCATATTGGGGCCTGTGAATCCATCATGAAGAAGAAAACCAAGCAGGATTTCCAGGAGCTAATCAAGACTGAGCATGCACTGCTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574755.5
3UTR CAA 90 bp TCCACACGTGGGATCAAATTCAGCTTTTTGCTGATGGCACGAAAATaGCTCCTCTTGGCCAGAGAACTGAAGGCATCAGTAATCTTTCCT +
Preference number: 2 (lower is better)
Translates to: STRGIKFSFLLMARK*LLLARELKASVIFP
Trigger: AGGAAAGATTACTGATGCCTTCAGTTCTCTGGCCAAGAGGAGCAATTTTCGTGCCATCAGCAAAAAGCTGAATTTGATCCCACGTGTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574755.5
3UTR-3UTR GCA 90 bp CAGGGAAGATGTCAACACTGGCCGGGAAAAACATCAGGCTTTCACCTCACTCATAAGACATTGGAGAAGTaGTCGTTCCGAATCTCATTA +
Preference number: 2 (lower is better)
Translates to: QGRCQHWPGKTSGFHLTHKTLEK*SFRISL
Trigger: TAATGAGATTCGGAACGAGCACTTCTCCAATGTCTT...ATGAGTGAGGTGAAAGCCTGATGTTTTTCCCGGCCAGTGTTGACATCTTCCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574755.5
3UTR-3UTR CCA 90 bp TGTCATCTACTAGGCCCTCATAAACCACTTGGGAGCAAAGTGCTGTCACAAAGTTTAGCAGGTAGTTGGTaGACACTTGGTTATAGCAGC +
Preference number: 2 (lower is better)
Translates to: CHLLGPHKPLGSKVLSQSLAGSW*TLGYSS
Trigger: GCTGCTATAACCAAGTGTCCACCAACTACCTGCTAA...ACTTTGTGACAGCACTTTGCTCCCAAGTGGTTTATGAGGGCCTAGTAGATGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574755.5
3UTR-3UTR GCA 90 bp TGTCATCTACTAGGCCCTCATAAACCACTTGGGAGCAAAGTGCTGTCACAAAGTATTCTGGTAGTTCCATaGTCAGCAGATCCACATCAA +
Preference number: 2 (lower is better)
Translates to: CHLLGPHKPLGSKVLSQSILVVP*SADPHQ
Trigger: TTGATGTGGATCTGCTGAGCATGGAACTACCAGAAT...ACTTTGTGACAGCACTTTGCTCCCAAGTGGTTTATGAGGGCCTAGTAGATGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574755.5
3UTR GCA 72 bp TTACTCTCCACGGCTGTGAGGGTGTCCCCGGGGGCCTaGTCCGTTAGGAGCCCAGCTCTTCGCAGATTGGAG +
Preference number: 3 (lower is better)
Translates to: LLSTAVRVSPGA*SVRSPALRRLE
Trigger: CTCCAATCTGCGAAGAGCTGGGCTCCTAACGGAGCAGGCCCCCGGGGACACCCTCACAGCCGTGGAGAGTAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574755.5
3UTR GCA 72 bp GATTCACAGGCCCCAATATGGAGACTCAGCAGGCGGTaGTCCTGTTTCAGGCCCTTGAGCTCCTGGGACACG +
Preference number: 3 (lower is better)
Translates to: DSQAPIWRLSRR*SCFRPLSSWDT
Trigger: CGTGTCCCAGGAGCTCAAGGGCCTGAAACAGGAGCACCGCCTGCTGAGTCTCCATATTGGGGCCTGTGAATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574755.5
3UTR CCA 72 bp GGGCCTGCTCCGTTAGGAGCCCAGCTCTTCGCAGATTaGAGAAGGTTAGCAGGTGCTCAGGGCCATAGCTCT +
Preference number: 3 (lower is better)
Translates to: GPAPLGAQLFAD*RRLAGAQGHSS
Trigger: AGAGCTATGGCCCTGAGCACCTGCTAACCTTCTCCAATCTGCGAAGAGCTGGGCTCCTAACGGAGCAGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574755.5
3UTR CCA 72 bp CACGTTCCATGCTCCCGGCTCTTAGCAGGTAGTTGGTaGACACTTGGTTATAGCAGCTGGGTGCCAGATGCC +
Preference number: 3 (lower is better)
Translates to: HVPCSRLLAGSW*TLGYSSWVPDA
Trigger: GGCATCTGGCACCCAGCTGCTATAACCAAGTGTCCACCAACTACCTGCTAAGAGCCGGGAGCATGGAACGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
3UTR-3UTR CAA 90 bp ATGTCCATGCCTCTCCGGCGATCATACTGGGCCTGCAAGTTCCGGGCCTTCTGGAAGAAGCCAAAGACATaGGAGAAGTGCTCGTTCCGA +
Preference number: 3 (lower is better)
Translates to: MSMPLRRSYWACKFRAFWKKPKT*EKCSFR
Trigger: TCGGAACGAGCACTTCTCCAATGTCTTTGGCTTCTT...CCAGAAGGCCCGGAACTTGCAGGCCCAGTATGATCGCCGGAGAGGCATGGACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574755.5
3UTR GCA 72 bp TTAATGTCCATGCCTCTCCGGCGATCATACTGGGCCTaGAAGTTCCGGGCCTTCTGGCTCAAGAAGCCAAAG +
Preference number: 3 (lower is better)
Translates to: LMSMPLRRSYWA*KFRAFWLKKPK
Trigger: CTTTGGCTTCTTGAGCCAGAAGGCCCGGAACTTGCAGGCCCAGTATGATCGCCGGAGAGGCATGGACATTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574755.5
3UTR CCA 72 bp CAACACGTTCCATGCTCCCGGCTCTTAGCAGGTAGTTaGTGGACACTTGGTTATAGCAGCTGGGTGCCAGAT +
Preference number: 3 (lower is better)
Translates to: QHVPCSRLLAGS*WTLGYSSWVPD
Trigger: ATCTGGCACCCAGCTGCTATAACCAAGTGTCCACCAACTACCTGCTAAGAGCCGGGAGCATGGAACGTGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
3UTR-3UTR CAA 90 bp TGTCATCTACTAGGCCCTCATAAACCACTTGGGAGCAAAGTGCTGTCACAAAGTTCTGGCCTTCGGCCCTaGGTTTCGCCATCCTCCTCC +
Preference number: 3 (lower is better)
Translates to: CHLLGPHKPLGSKVLSQSSGLRP*VSPSSS
Trigger: GGAGGAGGATGGCGAAACCAAGGGCCGAAGGCCAGA...ACTTTGTGACAGCACTTTGCTCCCAAGTGGTTTATGAGGGCCTAGTAGATGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574755.5
3UTR-3UTR CAA 90 bp CAAGTTCCGGGCCTTCTGGCTCAAGAAGCCAAAGACATTGGAGAAGTGCTCGTTGTAGTTGGTGGACACTaGGTTATAGCAGCTGGGTGC +
Preference number: 3 (lower is better)
Translates to: QVPGLLAQEAKDIGEVLVVVGGH*VIAAGC
Trigger: GCACCCAGCTGCTATAACCAAGTGTCCACCAACTAC...AACGAGCACTTCTCCAATGTCTTTGGCTTCTTGAGCCAGAAGGCCCGGAACTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574755.5
3UTR TCA 72 bp CGCCGTCCACACGTGGGATCAAATTCAGCTTTTTGCTaGTGGCACGAAAATTGCTCCTCTTGGCCAGAGAAC +
Preference number: 3 (lower is better)
Translates to: RRPHVGSNSAFC*WHENCSSWPEN
Trigger: GTTCTCTGGCCAAGAGGAGCAATTTTCGTGCCATCAGCAAAAAGCTGAATTTGATCCCACGTGTGGACGGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574755.5
3UTR GCA 72 bp TGGACACTTGGTTATAGCAGCTGGGTGCCAGATGCCTaGATCTCACTGAGGAATGTGTTCAGGGAAGATGTC +
Preference number: 3 (lower is better)
Translates to: WTLGYSSWVPDA*ISLRNVFREDV
Trigger: GACATCTTCCCTGAACACATTCCTCAGTGAGATGCAGGCATCTGGCACCCAGCTGCTATAACCAAGTGTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
3UTR GCA 72 bp ACTCATGGCCTCCATAAGGCGAGCGCTGTTTGTGACTaGTGTCGTCAGGAAAATGAACCTGTAGCCTTTCTC +
Preference number: 3 (lower is better)
Translates to: THGLHKASAVCD*CRQENEPVAFL
Trigger: GAGAAAGGCTACAGGTTCATTTTCCTGACGACAGCAGTCACAAACAGCGCTCGCCTTATGGAGGCCATGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574755.5
3UTR CCA 72 bp TTAGCAGGTAGTTGGTGGACACTTGGTTATAGCAGCTaGGTGCCAGATGCCTGCATCTCACTGAGGAATGTG +
Preference number: 3 (lower is better)
Translates to: LAGSWWTLGYSS*VPDACISLRNV
Trigger: CACATTCCTCAGTGAGATGCAGGCATCTGGCACCCAGCTGCTATAACCAAGTGTCCACCAACTACCTGCTAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
3UTR-3UTR CAA 90 bp AACACTGGCCGGGAAAAACATCAGGCTTTCACCTCACTCATGGCCTCCATAAGGAAGATCACTTTGTATTaGCGAGTTCGGCCAGCCAAT +
Preference number: 3 (lower is better)
Translates to: NTGREKHQAFTSLMASIRKITLY*RVRPAN
Trigger: ATTGGCTGGCCGAACTCGCAAATACAAAGTGATCTT...CCTTATGGAGGCCATGAGTGAGGTGAAAGCCTGATGTTTTTCCCGGCCAGTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574755.5
3UTR GCA 72 bp GCCTTCTGGCTCAAGAAGCCAAAGACATTGGAGAAGTaGTCGTTCCGAATCTCATTAAACACCTTGTCCTCG +
Preference number: 3 (lower is better)
Translates to: AFWLKKPKTLEK*SFRISLNTLSS
Trigger: CGAGGACAAGGTGTTTAATGAGATTCGGAACGAGCACTTCTCCAATGTCTTTGGCTTCTTGAGCCAGAAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574755.5
3UTR CCA 72 bp CTCACTGAGGAATGTGTTCAGGGAAGATGTCAACACTaGCCGGGAAAAACATCAGGCTTTCACCTCACTCAT +
Preference number: 3 (lower is better)
Translates to: LTEECVQGRCQH*PGKTSGFHLTH
Trigger: ATGAGTGAGGTGAAAGCCTGATGTTTTTCCCGGCCAGTGTTGACATCTTCCCTGAACACATTCCTCAGTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574755.5
3UTR-3UTR CAA 90 bp TGTCATCTACTAGGCCCTCATAAACCACTTGGGAGCAAAGTGCTGTCACAAAGTGGGCTGAAGATCACTTaGTATTTGCGAGTTCGGCCA +
Preference number: 3 (lower is better)
Translates to: CHLLGPHKPLGSKVLSQSGLKIT*YLRVRP
Trigger: TGGCCGAACTCGCAAATACAAAGTGATCTTCAGCCC...ACTTTGTGACAGCACTTTGCTCCCAAGTGGTTTATGAGGGCCTAGTAGATGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574755.5
3UTR-3UTR CAA 90 bp ACGTGGGATCAAATTCAGCTTTTTGCTGATGGCACGAAAATTGCTCCTCTTGGCAGCACCTTCAGGCTCTaGTCAGAGGATGTGACTTCT +
Preference number: 3 (lower is better)
Translates to: TWDQIQLFADGTKIAPLGSTFRL*SEDVTS
Trigger: AGAAGTCACATCCTCTGACAAGAGCCTGAAGGTGCT...GCCAAGAGGAGCAATTTTCGTGCCATCAGCAAAAAGCTGAATTTGATCCCACGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574755.5
3UTR GCA 72 bp TCTCAGATAATGTTCTCTAAATCCCAACACGTTCCATaGTCCCGGCTCTTAGCAGGTAGTTGGTGGACACTT +
Preference number: 3 (lower is better)
Translates to: SQIMFSKSQHVP*SRLLAGSWWTL
Trigger: AAGTGTCCACCAACTACCTGCTAAGAGCCGGGAGCATGGAACGTGTTGGGATTTAGAGAACATTATCTGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
3UTR TCA 72 bp TTAGCTCCTGGAAATCCTGCTTGGTTTTCTTCTTCATaGTGGATTCACAGGCCCCAATATGGAGACTCAGCA +
Preference number: 3 (lower is better)
Translates to: LAPGNPAWFSSS*WIHRPQYGDSA
Trigger: TGCTGAGTCTCCATATTGGGGCCTGTGAATCCATCATGAAGAAGAAAACCAAGCAGGATTTCCAGGAGCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574755.5
3UTR-3UTR CAA 90 bp GCATGCTCAGTCTTGATTAGCTCCTGGAAATCCTGCTTGGTTTTCTTCTTCATGATCTCATTAAACACCTaGTCCTCGGCATTGAGTAGC +
Preference number: 3 (lower is better)
Translates to: ACSVLISSWKSCLVFFFMISLNT*SSALSS
Trigger: GCTACTCAATGCCGAGGACAAGGTGTTTAATGAGAT...CATGAAGAAGAAAACCAAGCAGGATTTCCAGGAGCTAATCAAGACTGAGCATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574755.5
CDS-3UTR TCA 90 bp TCCCAACACGTTCCATGCTCCCGGCTCTTAGCAGGTAGTTGGTGGACACTTGGTGGACGCCCTTCGTTCTaGGAAGGCCGGCCGCAGCCC +
Preference number: 4 (lower is better)
Translates to: SQHVPCSRLLAGSWWTLGGRPSF*EGRPQP
Trigger: GGGCTGCGGCCGGCCTTCTCAGAACGAAGGGCGTCC...ACCAAGTGTCCACCAACTACCTGCTAAGAGCCGGGAGCATGGAACGTGTTGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR TCA 90 bp AGAAAGATATGTCCAATCTCTGGCCTTCGGCCCTTGGTTTCGCCATCCTCCTCCGGACGCCCTTCGTTCTaGGAAGGCCGGCCGCAGCCC +
Preference number: 4 (lower is better)
Translates to: RKICPISGLRPLVSPSSSGRPSF*EGRPQP
Trigger: GGGCTGCGGCCGGCCTTCTCAGAACGAAGGGCGTCC...GGAGGAGGATGGCGAAACCAAGGGCCGAAGGCCAGAGATTGGACATATCTTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574755.5
CDS-3UTR GCA 90 bp GCAGGTAGTTGGTGGACACTTGGTTATAGCAGCTGGGTGCCAGATGCCTGCATCATGGCAGCGGTCACCTaGGCCGCGGGGTGGAAGGAC +
Preference number: 4 (lower is better)
Translates to: AGSWWTLGYSSWVPDACIMAAVT*AAGWKD
Trigger: GTCCTTCCACCCCGCGGCGCAGGTGACCGCTGCCAT...GATGCAGGCATCTGGCACCCAGCTGCTATAACCAAGTGTCCACCAACTACCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR GCA 90 bp TCCCGGCTCTTAGCAGGTAGTTGGTGGACACTTGGTTATAGCAGCTGGGTGCCAGTGTCCCCGGGGGCCTaGTCCGTTAGGAGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: SRLLAGSWWTLGYSSWVPVSPGA*SVRSPA
Trigger: AGCTGGGCTCCTAACGGAGCAGGCCCCCGGGGACAC...TGGCACCCAGCTGCTATAACCAAGTGTCCACCAACTACCTGCTAAGAGCCGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR GCA 90 bp AGCTGGGTGCCAGATGCCTGCATCTCACTGAGGAATGTGTTCAGGGAAGATGTCATGGCAGCGGTCACCTaGGCCGCGGGGTGGAAGGAC +
Preference number: 4 (lower is better)
Translates to: SWVPDACISLRNVFREDVMAAVT*AAGWKD
Trigger: GTCCTTCCACCCCGCGGCGCAGGTGACCGCTGCCAT...GACATCTTCCCTGAACACATTCCTCAGTGAGATGCAGGCATCTGGCACCCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR GCA 90 bp GGCGCACCTGCCAATTCCATAGCAGTTTGGAAAGGGTCCATAGAGAGTGCTGAGATGGCAGCGGTCACCTaGGCCGCGGGGTGGAAGGAC +
Preference number: 4 (lower is better)
Translates to: GAPANSIAVWKGSIESAEMAAVT*AAGWKD
Trigger: GTCCTTCCACCCCGCGGCGCAGGTGACCGCTGCCAT...CTCAGCACTCTCTATGGACCCTTTCCAAACTGCTATGGAATTGGCAGGTGCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574755.5
CDS-3UTR GCA 90 bp GATGCCTGCATCTCACTGAGGAATGTGTTCAGGGAAGATGTCAACACTGGCCGGGTGTCCCCGGGGGCCTaGTCCGTTAGGAGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: DACISLRNVFREDVNTGRVSPGA*SVRSPA
Trigger: AGCTGGGCTCCTAACGGAGCAGGCCCCCGGGGACAC...CCGGCCAGTGTTGACATCTTCCCTGAACACATTCCTCAGTGAGATGCAGGCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR GCA 90 bp GGCGCACCTGCCAATTCCATAGCAGTTTGGAAAGGGTCCATAGAGAGTGCTGAGGTGTCCCCGGGGGCCTaGTCCGTTAGGAGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: GAPANSIAVWKGSIESAEVSPGA*SVRSPA
Trigger: AGCTGGGCTCCTAACGGAGCAGGCCCCCGGGGACAC...CTCAGCACTCTCTATGGACCCTTTCCAAACTGCTATGGAATTGGCAGGTGCGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574755.5
CDS-3UTR CCA 90 bp TCCCAACACGTTCCATGCTCCCGGCTCTTAGCAGGTAGTTGGTGGACACTTGGTACCTGCGCCGCGGGGTaGAAGGACGCCCTTCGTTCT +
Preference number: 4 (lower is better)
Translates to: SQHVPCSRLLAGSWWTLGTCAAG*KDALRS
Trigger: AGAACGAAGGGCGTCCTTCCACCCCGCGGCGCAGGT...ACCAAGTGTCCACCAACTACCTGCTAAGAGCCGGGAGCATGGAACGTGTTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR CCA 90 bp GATGCCTGCATCTCACTGAGGAATGTGTTCAGGGAAGATGTCAACACTGGCCGGGGGGCGTCCGGCCGATaGGGAAAAGCCATGGCAGCG +
Preference number: 4 (lower is better)
Translates to: DACISLRNVFREDVNTGRGASGR*GKAMAA
Trigger: CGCTGCCATGGCTTTTCCCCATCGGCCGGACGCCCC...CCGGCCAGTGTTGACATCTTCCCTGAACACATTCCTCAGTGAGATGCAGGCATC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR CCA 90 bp GGTAGTTGGTGGACACTTGGTTATAGCAGCTGGGTGCCAGATGCCTGCATCTCAGGGGCGTCCGGCCGATaGGGAAAAGCCATGGCAGCG +
Preference number: 4 (lower is better)
Translates to: GSWWTLGYSSWVPDACISGASGR*GKAMAA
Trigger: CGCTGCCATGGCTTTTCCCCATCGGCCGGACGCCCC...TGAGATGCAGGCATCTGGCACCCAGCTGCTATAACCAAGTGTCCACCAACTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR TCA 90 bp GTGCCAGATGCCTGCATCTCACTGAGGAATGTGTTCAGGGAAGATGTCAACACTGGACGCCCTTCGTTCTaGGAAGGCCGGCCGCAGCCC +
Preference number: 4 (lower is better)
Translates to: VPDACISLRNVFREDVNTGRPSF*EGRPQP
Trigger: GGGCTGCGGCCGGCCTTCTCAGAACGAAGGGCGTCC...AGTGTTGACATCTTCCCTGAACACATTCCTCAGTGAGATGCAGGCATCTGGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR CCA 90 bp GCAGGTAGTTGGTGGACACTTGGTTATAGCAGCTGGGTGCCAGATGCCTGCATCTCCAGAGACCCCAGATaGGCCCTCGCTCCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: AGSWWTLGYSSWVPDACISRDPR*ALAPQQ
Trigger: CTGCTGAGGAGCGAGGGCCCATCTGGGGTCTCTGGA...GATGCAGGCATCTGGCACCCAGCTGCTATAACCAAGTGTCCACCAACTACCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR CCA 90 bp GTTCCATGCTCCCGGCTCTTAGCAGGTAGTTGGTGGACACTTGGTTATAGCAGCACCTGCGCCGCGGGGTaGAAGGACGCCCTTCGTTCT +
Preference number: 4 (lower is better)
Translates to: VPCSRLLAGSWWTLGYSSTCAAG*KDALRS
Trigger: AGAACGAAGGGCGTCCTTCCACCCCGCGGCGCAGGT...GCTGCTATAACCAAGTGTCCACCAACTACCTGCTAAGAGCCGGGAGCATGGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR CCA 90 bp TCCCAACACGTTCCATGCTCCCGGCTCTTAGCAGGTAGTTGGTGGACACTTGGTCTCCGGCGATCATACTaGGCCTGCAAGTTCCGGGCC +
Preference number: 4 (lower is better)
Translates to: SQHVPCSRLLAGSWWTLGLRRSY*ACKFRA
Trigger: GGCCCGGAACTTGCAGGCCCAGTATGATCGCCGGAG...ACCAAGTGTCCACCAACTACCTGCTAAGAGCCGGGAGCATGGAACGTGTTGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR TCA 90 bp TCCCAACACGTTCCATGCTCCCGGCTCTTAGCAGGTAGTTGGTGGACACTTGGTGCTCCAGCAGATAGATaGGCTGGTCTCGAGCCAGCC +
Preference number: 4 (lower is better)
Translates to: SQHVPCSRLLAGSWWTLGAPADR*AGLEPA
Trigger: GGCTGGCTCGAGACCAGCTCATCTATCTGCTGGAGC...ACCAAGTGTCCACCAACTACCTGCTAAGAGCCGGGAGCATGGAACGTGTTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR CCA 90 bp TTAGCAGGTAGTTGGTGGACACTTGGTTATAGCAGCTGGGTGCCAGATGCCTGCTCCAGAGACCCCAGATaGGCCCTCGCTCCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: LAGSWWTLGYSSWVPDACSRDPR*ALAPQQ
Trigger: CTGCTGAGGAGCGAGGGCCCATCTGGGGTCTCTGGA...GCAGGCATCTGGCACCCAGCTGCTATAACCAAGTGTCCACCAACTACCTGCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR CCA 90 bp CAGGTAGTTGGTGGACACTTGGTTATAGCAGCTGGGTGCCAGATGCCTGCATCTGATGGGGAAAAGCCATaGCAGCGGTCACCTGCGCCG +
Preference number: 4 (lower is better)
Translates to: QVVGGHLVIAAGCQMPASDGEKP*QRSPAP
Trigger: CGGCGCAGGTGACCGCTGCCATGGCTTTTCCCCATC...AGATGCAGGCATCTGGCACCCAGCTGCTATAACCAAGTGTCCACCAACTACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR CCA 90 bp CAGGTAGTTGGTGGACACTTGGTTATAGCAGCTGGGTGCCAGATGCCTGCATCTCTCCGGCGATCATACTaGGCCTGCAAGTTCCGGGCC +
Preference number: 4 (lower is better)
Translates to: QVVGGHLVIAAGCQMPASLRRSY*ACKFRA
Trigger: GGCCCGGAACTTGCAGGCCCAGTATGATCGCCGGAG...AGATGCAGGCATCTGGCACCCAGCTGCTATAACCAAGTGTCCACCAACTACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR CCA 90 bp TTAGCAGGTAGTTGGTGGACACTTGGTTATAGCAGCTGGGTGCCAGATGCCTGCCTCCGGCGATCATACTaGGCCTGCAAGTTCCGGGCC +
Preference number: 4 (lower is better)
Translates to: LAGSWWTLGYSSWVPDACLRRSY*ACKFRA
Trigger: GGCCCGGAACTTGCAGGCCCAGTATGATCGCCGGAG...GCAGGCATCTGGCACCCAGCTGCTATAACCAAGTGTCCACCAACTACCTGCTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR GCA 90 bp GATGCCTGCATCTCACTGAGGAATGTGTTCAGGGAAGATGTCAACACTGGCCGGCTCCCTGATCCACTCTaGCCGTCAGCAGGATTCCGG +
Preference number: 4 (lower is better)
Translates to: DACISLRNVFREDVNTGRLPDPL*PSAGFR
Trigger: CCGGAATCCTGCTGACGGGCAGAGTGGATCAGGGAG...CCGGCCAGTGTTGACATCTTCCCTGAACACATTCCTCAGTGAGATGCAGGCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333371.8
ENST00000535906.1
CDS-3UTR GCA 90 bp GATGCCTGCATCTCACTGAGGAATGTGTTCAGGGAAGATGTCAACACTGGCCGGGCCTTGTCTCAGACCTaGAGCCACCGTGTCTCGACC +
Preference number: 4 (lower is better)
Translates to: DACISLRNVFREDVNTGRALSQT*SHRVST
Trigger: GGTCGAGACACGGTGGCTGCAGGTCTGAGACAAGGC...CCGGCCAGTGTTGACATCTTCCCTGAACACATTCCTCAGTGAGATGCAGGCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR GCA 90 bp TTAGCAGGTAGTTGGTGGACACTTGGTTATAGCAGCTGGGTGCCAGATGCCTGCGCCTTGTCTCAGACCTaGAGCCACCGTGTCTCGACC +
Preference number: 4 (lower is better)
Translates to: LAGSWWTLGYSSWVPDACALSQT*SHRVST
Trigger: GGTCGAGACACGGTGGCTGCAGGTCTGAGACAAGGC...GCAGGCATCTGGCACCCAGCTGCTATAACCAAGTGTCCACCAACTACCTGCTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR GCA 90 bp CAGGCTCTTGTCAGAGGATGTGACTTCTGGGCCAAAGTCGACACTCCCACACTTGCCTTGTCTCAGACCTaGAGCCACCGTGTCTCGACC +
Preference number: 4 (lower is better)
Translates to: QALVRGCDFWAKVDTPTLALSQT*SHRVST
Trigger: GGTCGAGACACGGTGGCTGCAGGTCTGAGACAAGGC...AAGTGTGGGAGTGTCGACTTTGGCCCAGAAGTCACATCCTCTGACAAGAGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574755.5
CDS-3UTR GCA 90 bp GCAGGTAGTTGGTGGACACTTGGTTATAGCAGCTGGGTGCCAGATGCCTGCATCCGCCGCTCTAGCACCTaGTCAATGATTCGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: AGSWWTLGYSSWVPDACIRRSST*SMIRQL
Trigger: GAGCTGCCGAATCATTGAGCAGGTGCTAGAGCGGCG...GATGCAGGCATCTGGCACCCAGCTGCTATAACCAAGTGTCCACCAACTACCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR GCA 90 bp GATGCCTGCATCTCACTGAGGAATGTGTTCAGGGAAGATGTCAACACTGGCCGGACCTCATCAAGGCCCTaGCAGCTTCGCCGCTCTAGC +
Preference number: 4 (lower is better)
Translates to: DACISLRNVFREDVNTGRTSSRP*QLRRSS
Trigger: GCTAGAGCGGCGAAGCTGGCAGGGCCTTGATGAGGT...CCGGCCAGTGTTGACATCTTCCCTGAACACATTCCTCAGTGAGATGCAGGCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR GCA 90 bp TTAGCAGGTAGTTGGTGGACACTTGGTTATAGCAGCTGGGTGCCAGATGCCTGCACCTCATCAAGGCCCTaGCAGCTTCGCCGCTCTAGC +
Preference number: 4 (lower is better)
Translates to: LAGSWWTLGYSSWVPDACTSSRP*QLRRSS
Trigger: GCTAGAGCGGCGAAGCTGGCAGGGCCTTGATGAGGT...GCAGGCATCTGGCACCCAGCTGCTATAACCAAGTGTCCACCAACTACCTGCTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR GCA 90 bp TCCCAACACGTTCCATGCTCCCGGCTCTTAGCAGGTAGTTGGTGGACACTTGGTTGTAGCCTTTCTCTCTaGCCAGGAACCGGAGGGCTG +
Preference number: 4 (lower is better)
Translates to: SQHVPCSRLLAGSWWTLGCSLSL*PGTGGL
Trigger: CAGCCCTCCGGTTCCTGGGCAGAGAGAAAGGCTACA...ACCAAGTGTCCACCAACTACCTGCTAAGAGCCGGGAGCATGGAACGTGTTGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR CCA 90 bp TCCCGGCTCTTAGCAGGTAGTTGGTGGACACTTGGTTATAGCAGCTGGGTGCCAGCTATCCTTCAGGCCTaGGCACCGACTTCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: SRLLAGSWWTLGYSSWVPAILQA*APTSRD
Trigger: GTCTCTGGAAGTCGGTGCCCAGGCCTGAAGGATAGC...TGGCACCCAGCTGCTATAACCAAGTGTCCACCAACTACCTGCTAAGAGCCGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR CCA 90 bp TCCCTCTTCCTCAAGCACCATCTCACACGCATAGAACTTTTGAGGGCTGAAGATGGGGCGTCCGGCCGATaGGGAAAAGCCATGGCAGCG +
Preference number: 4 (lower is better)
Translates to: SLFLKHHLTRIELLRAEDGASGR*GKAMAA
Trigger: CGCTGCCATGGCTTTTCCCCATCGGCCGGACGCCCC...ATCTTCAGCCCTCAAAAGTTCTATGCGTGTGAGATGGTGCTTGAGGAAGAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000574755.5
CDS-3UTR CCA 90 bp ATGTCCATGCCTCTCCGGCGATCATACTGGGCCTGCAAGTTCCGGGCCTTCTGGCAGCTCTTCGCAGATTaGAGAAGGTTAGCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: MSMPLRRSYWACKFRAFWQLFAD*RRLAGA
Trigger: AGCACCTGCTAACCTTCTCCAATCTGCGAAGAGCTG...CCAGAAGGCCCGGAACTTGCAGGCCCAGTATGATCGCCGGAGAGGCATGGACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574755.5
CDS-3UTR TCA 90 bp CAGATAATGTTCTCTAAATCCCAACACGTTCCATGCTCCCGGCTCTTAGCAGGTTCGACCCTCCCTCCCTaGTCCACTCTGCCCGTCAGC +
Preference number: 4 (lower is better)
Translates to: QIMFSKSQHVPCSRLLAGSTLPP*STLPVS
Trigger: GCTGACGGGCAGAGTGGATCAGGGAGGGAGGGTCGA...ACCTGCTAAGAGCCGGGAGCATGGAACGTGTTGGGATTTAGAGAACATTATCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333371.8
ENST00000535906.1
CDS-3UTR TCA 90 bp TCCCAACACGTTCCATGCTCCCGGCTCTTAGCAGGTAGTTGGTGGACACTTGGTCCTTGTCCTCGGCATTaGGTAGCACCTTCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: SQHVPCSRLLAGSWWTLGPCPRH*VAPSGS
Trigger: AGAGCCTGAAGGTGCTACTCAATGCCGAGGACAAGG...ACCAAGTGTCCACCAACTACCTGCTAAGAGCCGGGAGCATGGAACGTGTTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR TCA 90 bp ATGTCCATGCCTCTCCGGCGATCATACTGGGCCTGCAAGTTCCGGGCCTTCTGGCTGTCGTCAGGAAAATaGACCTGTAGCCTTTCTCTC +
Preference number: 4 (lower is better)
Translates to: MSMPLRRSYWACKFRAFWLSSGK*TCSLSL
Trigger: GAGAGAAAGGCTACAGGTTCATTTTCCTGACGACAG...CCAGAAGGCCCGGAACTTGCAGGCCCAGTATGATCGCCGGAGAGGCATGGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574755.5
CDS-3UTR GCA 90 bp CAGGTAGTTGGTGGACACTTGGTTATAGCAGCTGGGTGCCAGATGCCTGCATCTCGATCATACTGGGCCTaGAAGTTCCGGGCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: QVVGGHLVIAAGCQMPASRSYWA*KFRAFW
Trigger: CCAGAAGGCCCGGAACTTGCAGGCCCAGTATGATCG...AGATGCAGGCATCTGGCACCCAGCTGCTATAACCAAGTGTCCACCAACTACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR GCA 90 bp TCACTCATGGCCTCCATAAGGCGAGCGCTGTTTGTGACTGCTGTCGTCAGGAAACGATCATACTGGGCCTaGAAGTTCCGGGCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: SLMASIRRALFVTAVVRKRSYWA*KFRAFW
Trigger: CCAGAAGGCCCGGAACTTGCAGGCCCAGTATGATCG...TTTCCTGACGACAGCAGTCACAAACAGCGCTCGCCTTATGGAGGCCATGAGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574755.5
CDS-3UTR GCA 90 bp GTTCCATGCTCCCGGCTCTTAGCAGGTAGTTGGTGGACACTTGGTTATAGCAGCAGACTCAGCAGGCGGTaGTCCTGTTTCAGGCCCTTG +
Preference number: 4 (lower is better)
Translates to: VPCSRLLAGSWWTLGYSSRLSRR*SCFRPL
Trigger: CAAGGGCCTGAAACAGGAGCACCGCCTGCTGAGTCT...GCTGCTATAACCAAGTGTCCACCAACTACCTGCTAAGAGCCGGGAGCATGGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR GCA 90 bp TTAGCAGGTAGTTGGTGGACACTTGGTTATAGCAGCTGGGTGCCAGATGCCTGCCGCCGCTCTAGCACCTaGTCAATGATTCGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: LAGSWWTLGYSSWVPDACRRSST*SMIRQL
Trigger: GAGCTGCCGAATCATTGAGCAGGTGCTAGAGCGGCG...GCAGGCATCTGGCACCCAGCTGCTATAACCAAGTGTCCACCAACTACCTGCTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR GCA 90 bp TCCCAACACGTTCCATGCTCCCGGCTCTTAGCAGGTAGTTGGTGGACACTTGGTTCCCAACACGTTCCATaGTCCCGGCTCTTAGCAGGT +
Preference number: 4 (lower is better)
Translates to: SQHVPCSRLLAGSWWTLGSQHVP*SRLLAG
Trigger: ACCTGCTAAGAGCCGGGAGCATGGAACGTGTTGGGA...ACCAAGTGTCCACCAACTACCTGCTAAGAGCCGGGAGCATGGAACGTGTTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR CCA 90 bp CAGGCTCTTGTCAGAGGATGTGACTTCTGGGCCAAAGTCGACACTCCCACACTTGCTATCCTTCAGGCCTaGGCACCGACTTCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: QALVRGCDFWAKVDTPTLAILQA*APTSRD
Trigger: GTCTCTGGAAGTCGGTGCCCAGGCCTGAAGGATAGC...AAGTGTGGGAGTGTCGACTTTGGCCCAGAAGTCACATCCTCTGACAAGAGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574755.5
CDS-3UTR CCA 90 bp GTTCCGGGCCTTCTGGCTCAAGAAGCCAAAGACATTGGAGAAGTGCTCGTTCCGCCAGCCTCTTCAGCATaGAGAAGTCAGGCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: VPGLLAQEAKDIGEVLVPPASSA*RSQAAQ
Trigger: CTGAGCTGCCTGACTTCTCCATGCTGAAGAGGCTGG...CGGAACGAGCACTTCTCCAATGTCTTTGGCTTCTTGAGCCAGAAGGCCCGGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574755.5
CDS-3UTR CCA 90 bp GTTCCATGCTCCCGGCTCTTAGCAGGTAGTTGGTGGACACTTGGTTATAGCAGCTCACAGGCCCCAATATaGAGACTCAGCAGGCGGTGC +
Preference number: 4 (lower is better)
Translates to: VPCSRLLAGSWWTLGYSSSQAPI*RLSRRC
Trigger: GCACCGCCTGCTGAGTCTCCATATTGGGGCCTGTGA...GCTGCTATAACCAAGTGTCCACCAACTACCTGCTAAGAGCCGGGAGCATGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR CCA 90 bp CAGGTAGTTGGTGGACACTTGGTTATAGCAGCTGGGTGCCAGATGCCTGCATCTTCACAGGCCCCAATATaGAGACTCAGCAGGCGGTGC +
Preference number: 4 (lower is better)
Translates to: QVVGGHLVIAAGCQMPASSQAPI*RLSRRC
Trigger: GCACCGCCTGCTGAGTCTCCATATTGGGGCCTGTGA...AGATGCAGGCATCTGGCACCCAGCTGCTATAACCAAGTGTCCACCAACTACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR CCA 90 bp AGAAAGATATGTCCAATCTCTGGCCTTCGGCCCTTGGTTTCGCCATCCTCCTCCTCACAGGCCCCAATATaGAGACTCAGCAGGCGGTGC +
Preference number: 4 (lower is better)
Translates to: RKICPISGLRPLVSPSSSSQAPI*RLSRRC
Trigger: GCACCGCCTGCTGAGTCTCCATATTGGGGCCTGTGA...GGAGGAGGATGGCGAAACCAAGGGCCGAAGGCCAGAGATTGGACATATCTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574755.5
CDS-3UTR CCA 90 bp ATGTCCATGCCTCTCCGGCGATCATACTGGGCCTGCAAGTTCCGGGCCTTCTGGCTCGCCGTCCACACGTaGGATCAAATTCAGCTTTTT +
Preference number: 4 (lower is better)
Translates to: MSMPLRRSYWACKFRAFWLAVHT*DQIQLF
Trigger: AAAAAGCTGAATTTGATCCCACGTGTGGACGGCGAG...CCAGAAGGCCCGGAACTTGCAGGCCCAGTATGATCGCCGGAGAGGCATGGACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574755.5
CDS-3UTR TCA 90 bp TTAGCAGGTAGTTGGTGGACACTTGGTTATAGCAGCTGGGTGCCAGATGCCTGCCCTTGTCCTCGGCATTaGGTAGCACCTTCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: LAGSWWTLGYSSWVPDACPCPRH*VAPSGS
Trigger: AGAGCCTGAAGGTGCTACTCAATGCCGAGGACAAGG...GCAGGCATCTGGCACCCAGCTGCTATAACCAAGTGTCCACCAACTACCTGCTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR TCA 90 bp AGAAAGATATGTCCAATCTCTGGCCTTCGGCCCTTGGTTTCGCCATCCTCCTCCCCTTGTCCTCGGCATTaGGTAGCACCTTCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: RKICPISGLRPLVSPSSSPCPRH*VAPSGS
Trigger: AGAGCCTGAAGGTGCTACTCAATGCCGAGGACAAGG...GGAGGAGGATGGCGAAACCAAGGGCCGAAGGCCAGAGATTGGACATATCTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574755.5
CDS-3UTR TCA 90 bp GATGCCTGCATCTCACTGAGGAATGTGTTCAGGGAAGATGTCAACACTGGCCGGCCTGTTTCAGGCCCTTaGGCTCCTGGGACACGAAAT +
Preference number: 4 (lower is better)
Translates to: DACISLRNVFREDVNTGRPVSGP*APGTRN
Trigger: ATTTCGTGTCCCAGGAGCTCAAGGGCCTGAAACAGG...CCGGCCAGTGTTGACATCTTCCCTGAACACATTCCTCAGTGAGATGCAGGCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR TCA 90 bp GTTCCATGCTCCCGGCTCTTAGCAGGTAGTTGGTGGACACTTGGTTATAGCAGCCCTGTTTCAGGCCCTTaGGCTCCTGGGACACGAAAT +
Preference number: 4 (lower is better)
Translates to: VPCSRLLAGSWWTLGYSSPVSGP*APGTRN
Trigger: ATTTCGTGTCCCAGGAGCTCAAGGGCCTGAAACAGG...GCTGCTATAACCAAGTGTCCACCAACTACCTGCTAAGAGCCGGGAGCATGGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR TCA 90 bp AGCTGGGTGCCAGATGCCTGCATCTCACTGAGGAATGTGTTCAGGGAAGATGTCTGCTCTCCCGGATGTTaGACCCCTCTAGCAGTGCAT +
Preference number: 4 (lower is better)
Translates to: SWVPDACISLRNVFREDVCSPGC*TPLAVH
Trigger: ATGCACTGCTAGAGGGGTTCAACATCCGGGAGAGCA...GACATCTTCCCTGAACACATTCCTCAGTGAGATGCAGGCATCTGGCACCCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR TCA 90 bp TTAGCAGGTAGTTGGTGGACACTTGGTTATAGCAGCTGGGTGCCAGATGCCTGCGGCGAGCGCTGTTTGTaGCTGCTGTCGTCAGGAAAA +
Preference number: 4 (lower is better)
Translates to: LAGSWWTLGYSSWVPDACGERCL*LLSSGK
Trigger: TTTTCCTGACGACAGCAGTCACAAACAGCGCTCGCC...GCAGGCATCTGGCACCCAGCTGCTATAACCAAGTGTCCACCAACTACCTGCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR GCA 90 bp TTCTCTAAATCCCAACACGTTCCATGCTCCCGGCTCTTAGCAGGTAGTTGGTGGAGACTCAGCAGGCGGTaGTCCTGTTTCAGGCCCTTG +
Preference number: 4 (lower is better)
Translates to: FSKSQHVPCSRLLAGSWWRLSRR*SCFRPL
Trigger: CAAGGGCCTGAAACAGGAGCACCGCCTGCTGAGTCT...CCACCAACTACCTGCTAAGAGCCGGGAGCATGGAACGTGTTGGGATTTAGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR GCA 90 bp TCCCAACACGTTCCATGCTCCCGGCTCTTAGCAGGTAGTTGGTGGACACTTGGTTGTCGGTCACCAGCTTaGTCACTTTACTCTCCACGG +
Preference number: 4 (lower is better)
Translates to: SQHVPCSRLLAGSWWTLGCRSPA*SLYSPR
Trigger: CCGTGGAGAGTAAAGTGAGCAAGCTGGTGACCGACA...ACCAAGTGTCCACCAACTACCTGCTAAGAGCCGGGAGCATGGAACGTGTTGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR GCA 90 bp TCCCGGCTCTTAGCAGGTAGTTGGTGGACACTTGGTTATAGCAGCTGGGTGCCATGGGTGCCAGATGCCTaGATCTCACTGAGGAATGTG +
Preference number: 4 (lower is better)
Translates to: SRLLAGSWWTLGYSSWVPWVPDA*ISLRNV
Trigger: CACATTCCTCAGTGAGATGCAGGCATCTGGCACCCA...TGGCACCCAGCTGCTATAACCAAGTGTCCACCAACTACCTGCTAAGAGCCGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR GCA 90 bp GTTCCATGCTCCCGGCTCTTAGCAGGTAGTTGGTGGACACTTGGTTATAGCAGCTCCCAACACGTTCCATaGTCCCGGCTCTTAGCAGGT +
Preference number: 4 (lower is better)
Translates to: VPCSRLLAGSWWTLGYSSSQHVP*SRLLAG
Trigger: ACCTGCTAAGAGCCGGGAGCATGGAACGTGTTGGGA...GCTGCTATAACCAAGTGTCCACCAACTACCTGCTAAGAGCCGGGAGCATGGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR CCA 90 bp TTCTCTAAATCCCAACACGTTCCATGCTCCCGGCTCTTAGCAGGTAGTTGGTGGGCTATCCTTCAGGCCTaGGCACCGACTTCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: FSKSQHVPCSRLLAGSWWAILQA*APTSRD
Trigger: GTCTCTGGAAGTCGGTGCCCAGGCCTGAAGGATAGC...CCACCAACTACCTGCTAAGAGCCGGGAGCATGGAACGTGTTGGGATTTAGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR CCA 90 bp ACGTGGGATCAAATTCAGCTTTTTGCTGATGGCACGAAAATTGCTCCTCTTGGCACCTGCGCCGCGGGGTaGAAGGACGCCCTTCGTTCT +
Preference number: 4 (lower is better)
Translates to: TWDQIQLFADGTKIAPLGTCAAG*KDALRS
Trigger: AGAACGAAGGGCGTCCTTCCACCCCGCGGCGCAGGT...GCCAAGAGGAGCAATTTTCGTGCCATCAGCAAAAAGCTGAATTTGATCCCACGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000574755.5
CDS-3UTR CCA 90 bp CAGATAATGTTCTCTAAATCCCAACACGTTCCATGCTCCCGGCTCTTAGCAGGTGATGGGGAAAAGCCATaGCAGCGGTCACCTGCGCCG +
Preference number: 4 (lower is better)
Translates to: QIMFSKSQHVPCSRLLAGDGEKP*QRSPAP
Trigger: CGGCGCAGGTGACCGCTGCCATGGCTTTTCCCCATC...ACCTGCTAAGAGCCGGGAGCATGGAACGTGTTGGGATTTAGAGAACATTATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR CCA 90 bp TCCCTCTTCCTCAAGCACCATCTCACACGCATAGAACTTTTGAGGGCTGAAGATGATGGGGAAAAGCCATaGCAGCGGTCACCTGCGCCG +
Preference number: 4 (lower is better)
Translates to: SLFLKHHLTRIELLRAEDDGEKP*QRSPAP
Trigger: CGGCGCAGGTGACCGCTGCCATGGCTTTTCCCCATC...ATCTTCAGCCCTCAAAAGTTCTATGCGTGTGAGATGGTGCTTGAGGAAGAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000574755.5
CDS-3UTR CCA 90 bp CAGGTAGTTGGTGGACACTTGGTTATAGCAGCTGGGTGCCAGATGCCTGCATCTCCAGCCTCTTCAGCATaGAGAAGTCAGGCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: QVVGGHLVIAAGCQMPASPASSA*RSQAAQ
Trigger: CTGAGCTGCCTGACTTCTCCATGCTGAAGAGGCTGG...AGATGCAGGCATCTGGCACCCAGCTGCTATAACCAAGTGTCCACCAACTACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR CCA 90 bp GATGGACAAAAGGCACATGAGGCGCAGGCTTTCTATAGGCGACACCTGCCGGTCAGGCCCTTGAGCTCCTaGGACACGAAATTCTTCATC +
Preference number: 4 (lower is better)
Translates to: DGQKAHEAQAFYRRHLPVRPLSS*DTKFFI
Trigger: GATGAAGAATTTCGTGTCCCAGGAGCTCAAGGGCCT...GACCGGCAGGTGTCGCCTATAGAAAGCCTGCGCCTCATGTGCCTTTTGTCCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574755.5
CDS-3UTR CCA 90 bp TCCCAACACGTTCCATGCTCCCGGCTCTTAGCAGGTAGTTGGTGGACACTTGGTCTTGGTTATAGCAGCTaGGTGCCAGATGCCTGCATC +
Preference number: 4 (lower is better)
Translates to: SQHVPCSRLLAGSWWTLGLGYSS*VPDACI
Trigger: GATGCAGGCATCTGGCACCCAGCTGCTATAACCAAG...ACCAAGTGTCCACCAACTACCTGCTAAGAGCCGGGAGCATGGAACGTGTTGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
3UTR CAA 72 bp TCAGTAATCTTTCCTGCAGCCTTGTCGGTCACCAGCTaGCTCACTTTACTCTCCACGGCTGTGAGGGTGTCC +
Preference number: 4 (lower is better)
Translates to: SVIFPAALSVTS*LTLLSTAVRVS
Trigger: GGACACCCTCACAGCCGTGGAGAGTAAAGTGAGCAAGCTGGTGACCGACAAGGCTGCAGGAAAGATTACTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574755.5
CDS-3UTR TCA 90 bp TTGTCAGAGGATGTGACTTCTGGGCCAAAGTCGACACTCCCACACTTGATGCGGGTCCATAGAGAGTGCTaGGAAGGTGTAAGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: LSEDVTSGPKSTLPHLMRVHREC*EGVRPE
Trigger: CTCAGGCCTTACACCTTCTCAGCACTCTCTATGGAC...CCGCATCAAGTGTGGGAGTGTCGACTTTGGCCCAGAAGTCACATCCTCTGACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574755.5
CDS-3UTR TCA 90 bp GATGCCTGCATCTCACTGAGGAATGTGTTCAGGGAAGATGTCAACACTGGCCGGCGACACTCCCACACTTaGTGCGGAAGGTGTCATCTA +
Preference number: 4 (lower is better)
Translates to: DACISLRNVFREDVNTGRRHSHT*CGRCHL
Trigger: TAGATGACACCTTCCGCATCAAGTGTGGGAGTGTCG...CCGGCCAGTGTTGACATCTTCCCTGAACACATTCCTCAGTGAGATGCAGGCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR TCA 90 bp GCAGGTAGTTGGTGGACACTTGGTTATAGCAGCTGGGTGCCAGATGCCTGCATCTCTTGTCAGAGGATGTaGCTTCTGGGCCAAAGTCGA +
Preference number: 4 (lower is better)
Translates to: AGSWWTLGYSSWVPDACISCQRM*LLGQSR
Trigger: TCGACTTTGGCCCAGAAGTCACATCCTCTGACAAGA...GATGCAGGCATCTGGCACCCAGCTGCTATAACCAAGTGTCCACCAACTACCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR TCA 90 bp TCCCGGCTCTTAGCAGGTAGTTGGTGGACACTTGGTTATAGCAGCTGGGTGCCAATGCCTGCATCTCACTaGGGAATGTGTTCAGGGAAG +
Preference number: 4 (lower is better)
Translates to: SRLLAGSWWTLGYSSWVPMPASH*GMCSGK
Trigger: CTTCCCTGAACACATTCCTCAGTGAGATGCAGGCAT...TGGCACCCAGCTGCTATAACCAAGTGTCCACCAACTACCTGCTAAGAGCCGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR GCA 90 bp CAGATAATGTTCTCTAAATCCCAACACGTTCCATGCTCCCGGCTCTTAGCAGGTCTCCCTGATCCACTCTaGCCGTCAGCAGGATTCCGG +
Preference number: 4 (lower is better)
Translates to: QIMFSKSQHVPCSRLLAGLPDPL*PSAGFR
Trigger: CCGGAATCCTGCTGACGGGCAGAGTGGATCAGGGAG...ACCTGCTAAGAGCCGGGAGCATGGAACGTGTTGGGATTTAGAGAACATTATCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333371.8
ENST00000535906.1
CDS-3UTR GCA 90 bp TCCCAACACGTTCCATGCTCCCGGCTCTTAGCAGGTAGTTGGTGGACACTTGGTCCATCTTGGCGCACCTaGCAATTCCATAGCAGTTTG +
Preference number: 4 (lower is better)
Translates to: SQHVPCSRLLAGSWWTLGPSWRT*QFHSSL
Trigger: CAAACTGCTATGGAATTGGCAGGTGCGCCAAGATGG...ACCAAGTGTCCACCAACTACCTGCTAAGAGCCGGGAGCATGGAACGTGTTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR GCA 90 bp AGCTGGGTGCCAGATGCCTGCATCTCACTGAGGAATGTGTTCAGGGAAGATGTCCCTCCACAATTCATATaGCATCTTGGCGCACCTGCC +
Preference number: 4 (lower is better)
Translates to: SWVPDACISLRNVFREDVPPQFI*HLGAPA
Trigger: GGCAGGTGCGCCAAGATGGCATATGAATTGTGGAGG...GACATCTTCCCTGAACACATTCCTCAGTGAGATGCAGGCATCTGGCACCCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR GCA 90 bp TTAGCAGGTAGTTGGTGGACACTTGGTTATAGCAGCTGGGTGCCAGATGCCTGCCCTCCACAATTCATATaGCATCTTGGCGCACCTGCC +
Preference number: 4 (lower is better)
Translates to: LAGSWWTLGYSSWVPDACPPQFI*HLGAPA
Trigger: GGCAGGTGCGCCAAGATGGCATATGAATTGTGGAGG...GCAGGCATCTGGCACCCAGCTGCTATAACCAAGTGTCCACCAACTACCTGCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR GCA 90 bp GTGCCAGATGCCTGCATCTCACTGAGGAATGTGTTCAGGGAAGATGTCAACACTCGATCATACTGGGCCTaGAAGTTCCGGGCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: VPDACISLRNVFREDVNTRSYWA*KFRAFW
Trigger: CCAGAAGGCCCGGAACTTGCAGGCCCAGTATGATCG...AGTGTTGACATCTTCCCTGAACACATTCCTCAGTGAGATGCAGGCATCTGGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR GCA 90 bp GCAGGTAGTTGGTGGACACTTGGTTATAGCAGCTGGGTGCCAGATGCCTGCATCTCTATAGGCGACACCTaGCGGTCTATGTGTTCCTCA +
Preference number: 4 (lower is better)
Translates to: AGSWWTLGYSSWVPDACISIGDT*RSMCSS
Trigger: TGAGGAACACATAGACCGGCAGGTGTCGCCTATAGA...GATGCAGGCATCTGGCACCCAGCTGCTATAACCAAGTGTCCACCAACTACCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR GCA 90 bp AGCTGGGTGCCAGATGCCTGCATCTCACTGAGGAATGTGTTCAGGGAAGATGTCTGTCGGTCACCAGCTTaGTCACTTTACTCTCCACGG +
Preference number: 4 (lower is better)
Translates to: SWVPDACISLRNVFREDVCRSPA*SLYSPR
Trigger: CCGTGGAGAGTAAAGTGAGCAAGCTGGTGACCGACA...GACATCTTCCCTGAACACATTCCTCAGTGAGATGCAGGCATCTGGCACCCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR GCA 90 bp GTGCCAGATGCCTGCATCTCACTGAGGAATGTGTTCAGGGAAGATGTCAACACTTGTAGCCTTTCTCTCTaGCCAGGAACCGGAGGGCTG +
Preference number: 4 (lower is better)
Translates to: VPDACISLRNVFREDVNTCSLSL*PGTGGL
Trigger: CAGCCCTCCGGTTCCTGGGCAGAGAGAAAGGCTACA...AGTGTTGACATCTTCCCTGAACACATTCCTCAGTGAGATGCAGGCATCTGGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR GCA 90 bp AGCTGGGTGCCAGATGCCTGCATCTCACTGAGGAATGTGTTCAGGGAAGATGTCGTTATAGCAGCTGGGTaGCAGATGCCTGCATCTCAC +
Preference number: 4 (lower is better)
Translates to: SWVPDACISLRNVFREDVVIAAG*QMPASH
Trigger: GTGAGATGCAGGCATCTGGCACCCAGCTGCTATAAC...GACATCTTCCCTGAACACATTCCTCAGTGAGATGCAGGCATCTGGCACCCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR GCA 90 bp GTTCCATGCTCCCGGCTCTTAGCAGGTAGTTGGTGGACACTTGGTTATAGCAGCGTTATAGCAGCTGGGTaGCAGATGCCTGCATCTCAC +
Preference number: 4 (lower is better)
Translates to: VPCSRLLAGSWWTLGYSSVIAAG*QMPASH
Trigger: GTGAGATGCAGGCATCTGGCACCCAGCTGCTATAAC...GCTGCTATAACCAAGTGTCCACCAACTACCTGCTAAGAGCCGGGAGCATGGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR CCA 90 bp GGTAGTTGGTGGACACTTGGTTATAGCAGCTGGGTGCCAGATGCCTGCATCTCACACTCCAGGAATGAATaGCCACCTCCAGGCAAGAGA +
Preference number: 4 (lower is better)
Translates to: GSWWTLGYSSWVPDACISHSRNE*PPPGKR
Trigger: TCTCTTGCCTGGAGGTGGCCATTCATTCCTGGAGTG...TGAGATGCAGGCATCTGGCACCCAGCTGCTATAACCAAGTGTCCACCAACTACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR CCA 90 bp GATGCCTGCATCTCACTGAGGAATGTGTTCAGGGAAGATGTCAACACTGGCCGGCACTCCAGGAATGAATaGCCACCTCCAGGCAAGAGA +
Preference number: 4 (lower is better)
Translates to: DACISLRNVFREDVNTGRHSRNE*PPPGKR
Trigger: TCTCTTGCCTGGAGGTGGCCATTCATTCCTGGAGTG...CCGGCCAGTGTTGACATCTTCCCTGAACACATTCCTCAGTGAGATGCAGGCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR CCA 90 bp GTTCCATGCTCCCGGCTCTTAGCAGGTAGTTGGTGGACACTTGGTTATAGCAGCCTTGGTTATAGCAGCTaGGTGCCAGATGCCTGCATC +
Preference number: 4 (lower is better)
Translates to: VPCSRLLAGSWWTLGYSSLGYSS*VPDACI
Trigger: GATGCAGGCATCTGGCACCCAGCTGCTATAACCAAG...GCTGCTATAACCAAGTGTCCACCAACTACCTGCTAAGAGCCGGGAGCATGGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR CCA 90 bp GGTAGTTGGTGGACACTTGGTTATAGCAGCTGGGTGCCAGATGCCTGCATCTCACTTGGTTATAGCAGCTaGGTGCCAGATGCCTGCATC +
Preference number: 4 (lower is better)
Translates to: GSWWTLGYSSWVPDACISLGYSS*VPDACI
Trigger: GATGCAGGCATCTGGCACCCAGCTGCTATAACCAAG...TGAGATGCAGGCATCTGGCACCCAGCTGCTATAACCAAGTGTCCACCAACTACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
3UTR CAA 72 bp ACCTTGTCCTCGGCATTGAGTAGCACCTTCAGGCTCTaGTCAGAGGATGTGACTTCTGGGCCAAAGTCGACA +
Preference number: 4 (lower is better)
Translates to: TLSSALSSTFRL*SEDVTSGPKST
Trigger: TGTCGACTTTGGCCCAGAAGTCACATCCTCTGACAAGAGCCTGAAGGTGCTACTCAATGCCGAGGACAAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574755.5
CDS-3UTR TCA 90 bp TTAGCAGGTAGTTGGTGGACACTTGGTTATAGCAGCTGGGTGCCAGATGCCTGCCCTGAGCTACAGTGTTaGTCCAACGCTGATCTCCTT +
Preference number: 4 (lower is better)
Translates to: LAGSWWTLGYSSWVPDACPELQC*SNADLL
Trigger: AAGGAGATCAGCGTTGGATCAACACTGTAGCTCAGG...GCAGGCATCTGGCACCCAGCTGCTATAACCAAGTGTCCACCAACTACCTGCTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR TCA 90 bp TTCTCTAAATCCCAACACGTTCCATGCTCCCGGCTCTTAGCAGGTAGTTGGTGGGTCCATAGAGAGTGCTaGGAAGGTGTAAGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: FSKSQHVPCSRLLAGSWWVHREC*EGVRPE
Trigger: CTCAGGCCTTACACCTTCTCAGCACTCTCTATGGAC...CCACCAACTACCTGCTAAGAGCCGGGAGCATGGAACGTGTTGGGATTTAGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR TCA 90 bp AAGTTCCGGGCCTTCTGGCTCAAGAAGCCAAAGACATTGGAGAAGTGCTCGTTCCGACACTCCCACACTTaGTGCGGAAGGTGTCATCTA +
Preference number: 4 (lower is better)
Translates to: KFRAFWLKKPKTLEKCSFRHSHT*CGRCHL
Trigger: TAGATGACACCTTCCGCATCAAGTGTGGGAGTGTCG...GAACGAGCACTTCTCCAATGTCTTTGGCTTCTTGAGCCAGAAGGCCCGGAACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574755.5
CDS-3UTR TCA 90 bp GTGCCAGATGCCTGCATCTCACTGAGGAATGTGTTCAGGGAAGATGTCAACACTCCTGTTTCAGGCCCTTaGGCTCCTGGGACACGAAAT +
Preference number: 4 (lower is better)
Translates to: VPDACISLRNVFREDVNTPVSGP*APGTRN
Trigger: ATTTCGTGTCCCAGGAGCTCAAGGGCCTGAAACAGG...AGTGTTGACATCTTCCCTGAACACATTCCTCAGTGAGATGCAGGCATCTGGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR TCA 90 bp GCAGGTAGTTGGTGGACACTTGGTTATAGCAGCTGGGTGCCAGATGCCTGCATCGTGCATGCTCAGTCTTaGTTAGCTCCTGGAAATCCT +
Preference number: 4 (lower is better)
Translates to: AGSWWTLGYSSWVPDACIVHAQS*LAPGNP
Trigger: AGGATTTCCAGGAGCTAATCAAGACTGAGCATGCAC...GATGCAGGCATCTGGCACCCAGCTGCTATAACCAAGTGTCCACCAACTACCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR TCA 90 bp TCCCGGCTCTTAGCAGGTAGTTGGTGGACACTTGGTTATAGCAGCTGGGTGCCACTGTCGTCAGGAAAATaGACCTGTAGCCTTTCTCTC +
Preference number: 4 (lower is better)
Translates to: SRLLAGSWWTLGYSSWVPLSSGK*TCSLSL
Trigger: GAGAGAAAGGCTACAGGTTCATTTTCCTGACGACAG...TGGCACCCAGCTGCTATAACCAAGTGTCCACCAACTACCTGCTAAGAGCCGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR TCA 90 bp AGCACCTTCAGGCTCTTGTCAGAGGATGTGACTTCTGGGCCAAAGTCGACACTCATGCCTGCATCTCACTaGGGAATGTGTTCAGGGAAG +
Preference number: 4 (lower is better)
Translates to: STFRLLSEDVTSGPKSTLMPASH*GMCSGK
Trigger: CTTCCCTGAACACATTCCTCAGTGAGATGCAGGCAT...GAGTGTCGACTTTGGCCCAGAAGTCACATCCTCTGACAAGAGCCTGAAGGTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574755.5
CDS-3UTR GCA 90 bp CAGGTAGTTGGTGGACACTTGGTTATAGCAGCTGGGTGCCAGATGCCTGCATCTCCATCTTGGCGCACCTaGCAATTCCATAGCAGTTTG +
Preference number: 4 (lower is better)
Translates to: QVVGGHLVIAAGCQMPASPSWRT*QFHSSL
Trigger: CAAACTGCTATGGAATTGGCAGGTGCGCCAAGATGG...AGATGCAGGCATCTGGCACCCAGCTGCTATAACCAAGTGTCCACCAACTACCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR GCA 90 bp CAGGCTCTTGTCAGAGGATGTGACTTCTGGGCCAAAGTCGACACTCCCACACTTCCATCTTGGCGCACCTaGCAATTCCATAGCAGTTTG +
Preference number: 4 (lower is better)
Translates to: QALVRGCDFWAKVDTPTLPSWRT*QFHSSL
Trigger: CAAACTGCTATGGAATTGGCAGGTGCGCCAAGATGG...AAGTGTGGGAGTGTCGACTTTGGCCCAGAAGTCACATCCTCTGACAAGAGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574755.5
CDS-3UTR GCA 90 bp AAACATCAGGCTTTCACCTCACTCATGGCCTCCATAAGGCGAGCGCTGTTTGTGCCTCCACAATTCATATaGCATCTTGGCGCACCTGCC +
Preference number: 4 (lower is better)
Translates to: KHQAFTSLMASIRRALFVPPQFI*HLGAPA
Trigger: GGCAGGTGCGCCAAGATGGCATATGAATTGTGGAGG...CACAAACAGCGCTCGCCTTATGGAGGCCATGAGTGAGGTGAAAGCCTGATGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574755.5
CDS-3UTR GCA 90 bp GATGCCTGCATCTCACTGAGGAATGTGTTCAGGGAAGATGTCAACACTGGCCGGCCCTCTAGCAGTGCATaGTCAGTCTTGATTAGCTCC +
Preference number: 4 (lower is better)
Translates to: DACISLRNVFREDVNTGRPSSSA*SVLISS
Trigger: GGAGCTAATCAAGACTGAGCATGCACTGCTAGAGGG...CCGGCCAGTGTTGACATCTTCCCTGAACACATTCCTCAGTGAGATGCAGGCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR GCA 90 bp TCACTCATGGCCTCCATAAGGCGAGCGCTGTTTGTGACTGCTGTCGTCAGGAAACCCTCTAGCAGTGCATaGTCAGTCTTGATTAGCTCC +
Preference number: 4 (lower is better)
Translates to: SLMASIRRALFVTAVVRKPSSSA*SVLISS
Trigger: GGAGCTAATCAAGACTGAGCATGCACTGCTAGAGGG...TTTCCTGACGACAGCAGTCACAAACAGCGCTCGCCTTATGGAGGCCATGAGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574755.5
CDS-3UTR GCA 90 bp AGCTGGGTGCCAGATGCCTGCATCTCACTGAGGAATGTGTTCAGGGAAGATGTCTCTATAGGCGACACCTaGCGGTCTATGTGTTCCTCA +
Preference number: 4 (lower is better)
Translates to: SWVPDACISLRNVFREDVSIGDT*RSMCSS
Trigger: TGAGGAACACATAGACCGGCAGGTGTCGCCTATAGA...GACATCTTCCCTGAACACATTCCTCAGTGAGATGCAGGCATCTGGCACCCAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR GCA 90 bp TTCTCTAAATCCCAACACGTTCCATGCTCCCGGCTCTTAGCAGGTAGTTGGTGGTGTCGGTCACCAGCTTaGTCACTTTACTCTCCACGG +
Preference number: 4 (lower is better)
Translates to: FSKSQHVPCSRLLAGSWWCRSPA*SLYSPR
Trigger: CCGTGGAGAGTAAAGTGAGCAAGCTGGTGACCGACA...CCACCAACTACCTGCTAAGAGCCGGGAGCATGGAACGTGTTGGGATTTAGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR GCA 90 bp CAAACCATTCTCAGTGATGGACAAAAGGCACATGAGGCGCAGGCTTTCTATAGGTGTAGCCTTTCTCTCTaGCCAGGAACCGGAGGGCTG +
Preference number: 4 (lower is better)
Translates to: QTILSDGQKAHEAQAFYRCSLSL*PGTGGL
Trigger: CAGCCCTCCGGTTCCTGGGCAGAGAGAAAGGCTACA...CCTATAGAAAGCCTGCGCCTCATGTGCCTTTTGTCCATCACTGAGAATGGTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574755.5
CDS-3UTR GCA 90 bp TTCTCTAAATCCCAACACGTTCCATGCTCCCGGCTCTTAGCAGGTAGTTGGTGGTGGGTGCCAGATGCCTaGATCTCACTGAGGAATGTG +
Preference number: 4 (lower is better)
Translates to: FSKSQHVPCSRLLAGSWWWVPDA*ISLRNV
Trigger: CACATTCCTCAGTGAGATGCAGGCATCTGGCACCCA...CCACCAACTACCTGCTAAGAGCCGGGAGCATGGAACGTGTTGGGATTTAGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR GCA 90 bp CAAGTTCCGGGCCTTCTGGCTCAAGAAGCCAAAGACATTGGAGAAGTGCTCGTTTGGGTGCCAGATGCCTaGATCTCACTGAGGAATGTG +
Preference number: 4 (lower is better)
Translates to: QVPGLLAQEAKDIGEVLVWVPDA*ISLRNV
Trigger: CACATTCCTCAGTGAGATGCAGGCATCTGGCACCCA...AACGAGCACTTCTCCAATGTCTTTGGCTTCTTGAGCCAGAAGGCCCGGAACTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574755.5
CDS-3UTR GCA 90 bp GTGCCAGATGCCTGCATCTCACTGAGGAATGTGTTCAGGGAAGATGTCAACACTCAGCTGGGTGCCAGATaGCTGCATCTCACTGAGGAA +
Preference number: 4 (lower is better)
Translates to: VPDACISLRNVFREDVNTQLGAR*LHLTEE
Trigger: TTCCTCAGTGAGATGCAGGCATCTGGCACCCAGCTG...AGTGTTGACATCTTCCCTGAACACATTCCTCAGTGAGATGCAGGCATCTGGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR CCA 90 bp AGCTGGGTGCCAGATGCCTGCATCTCACTGAGGAATGTGTTCAGGGAAGATGTCAAGTTCCGGGCCTTCTaGCTCAAGAAGCCAAAGACA +
Preference number: 4 (lower is better)
Translates to: SWVPDACISLRNVFREDVKFRAF*LKKPKT
Trigger: TGTCTTTGGCTTCTTGAGCCAGAAGGCCCGGAACTT...GACATCTTCCCTGAACACATTCCTCAGTGAGATGCAGGCATCTGGCACCCAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR CCA 90 bp TTAGCAGGTAGTTGGTGGACACTTGGTTATAGCAGCTGGGTGCCAGATGCCTGCAGGCCCTTGAGCTCCTaGGACACGAAATTCTTCATC +
Preference number: 4 (lower is better)
Translates to: LAGSWWTLGYSSWVPDACRPLSS*DTKFFI
Trigger: GATGAAGAATTTCGTGTCCCAGGAGCTCAAGGGCCT...GCAGGCATCTGGCACCCAGCTGCTATAACCAAGTGTCCACCAACTACCTGCTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR CCA 90 bp AGCTGGGTGCCAGATGCCTGCATCTCACTGAGGAATGTGTTCAGGGAAGATGTCAGGCCCTTGAGCTCCTaGGACACGAAATTCTTCATC +
Preference number: 4 (lower is better)
Translates to: SWVPDACISLRNVFREDVRPLSS*DTKFFI
Trigger: GATGAAGAATTTCGTGTCCCAGGAGCTCAAGGGCCT...GACATCTTCCCTGAACACATTCCTCAGTGAGATGCAGGCATCTGGCACCCAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR CCA 90 bp GTTCCATGCTCCCGGCTCTTAGCAGGTAGTTGGTGGACACTTGGTTATAGCAGCCAGCTCTTCGCAGATTaGAGAAGGTTAGCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: VPCSRLLAGSWWTLGYSSQLFAD*RRLAGA
Trigger: AGCACCTGCTAACCTTCTCCAATCTGCGAAGAGCTG...GCTGCTATAACCAAGTGTCCACCAACTACCTGCTAAGAGCCGGGAGCATGGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR CCA 90 bp CAGGTAGTTGGTGGACACTTGGTTATAGCAGCTGGGTGCCAGATGCCTGCATCTCAGCTCTTCGCAGATTaGAGAAGGTTAGCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: QVVGGHLVIAAGCQMPASQLFAD*RRLAGA
Trigger: AGCACCTGCTAACCTTCTCCAATCTGCGAAGAGCTG...AGATGCAGGCATCTGGCACCCAGCTGCTATAACCAAGTGTCCACCAACTACCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR TCA 90 bp TTCTCTAAATCCCAACACGTTCCATGCTCCCGGCTCTTAGCAGGTAGTTGGTGGATTGTTCATTGGAGCTaGGGGCTGGCTTGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: FSKSQHVPCSRLLAGSWWIVHWS*GLACSP
Trigger: TGGAGAACAAGCCAGCCCTCAGCTCCAATGAACAAT...CCACCAACTACCTGCTAAGAGCCGGGAGCATGGAACGTGTTGGGATTTAGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333371.8
ENST00000535906.1
CDS-3UTR TCA 90 bp AGCTGGGTGCCAGATGCCTGCATCTCACTGAGGAATGTGTTCAGGGAAGATGTCAGAAGGTGTAAGGCCTaGGCTACAGTGTTGATCCAA +
Preference number: 4 (lower is better)
Translates to: SWVPDACISLRNVFREDVRRCKA*ATVLIQ
Trigger: TTGGATCAACACTGTAGCTCAGGCCTTACACCTTCT...GACATCTTCCCTGAACACATTCCTCAGTGAGATGCAGGCATCTGGCACCCAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR TCA 90 bp AACACTGGCCGGGAAAAACATCAGGCTTTCACCTCACTCATGGCCTCCATAAGGTCTTGTCAGAGGATGTaGCTTCTGGGCCAAAGTCGA +
Preference number: 4 (lower is better)
Translates to: NTGREKHQAFTSLMASIRSCQRM*LLGQSR
Trigger: TCGACTTTGGCCCAGAAGTCACATCCTCTGACAAGA...CCTTATGGAGGCCATGAGTGAGGTGAAAGCCTGATGTTTTTCCCGGCCAGTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574755.5
CDS-3UTR TCA 90 bp GGTAGTTGGTGGACACTTGGTTATAGCAGCTGGGTGCCAGATGCCTGCATCTCAGTGCATGCTCAGTCTTaGTTAGCTCCTGGAAATCCT +
Preference number: 4 (lower is better)
Translates to: GSWWTLGYSSWVPDACISVHAQS*LAPGNP
Trigger: AGGATTTCCAGGAGCTAATCAAGACTGAGCATGCAC...TGAGATGCAGGCATCTGGCACCCAGCTGCTATAACCAAGTGTCCACCAACTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR TCA 90 bp CAGATAATGTTCTCTAAATCCCAACACGTTCCATGCTCCCGGCTCTTAGCAGGTTGCTCTCCCGGATGTTaGACCCCTCTAGCAGTGCAT +
Preference number: 4 (lower is better)
Translates to: QIMFSKSQHVPCSRLLAGCSPGC*TPLAVH
Trigger: ATGCACTGCTAGAGGGGTTCAACATCCGGGAGAGCA...ACCTGCTAAGAGCCGGGAGCATGGAACGTGTTGGGATTTAGAGAACATTATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR TCA 90 bp TTAGCAGGTAGTTGGTGGACACTTGGTTATAGCAGCTGGGTGCCAGATGCCTGCCTGTCGTCAGGAAAATaGACCTGTAGCCTTTCTCTC +
Preference number: 4 (lower is better)
Translates to: LAGSWWTLGYSSWVPDACLSSGK*TCSLSL
Trigger: GAGAGAAAGGCTACAGGTTCATTTTCCTGACGACAG...GCAGGCATCTGGCACCCAGCTGCTATAACCAAGTGTCCACCAACTACCTGCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR TCA 90 bp CAGATAATGTTCTCTAAATCCCAACACGTTCCATGCTCCCGGCTCTTAGCAGGTGGCGAGCGCTGTTTGTaGCTGCTGTCGTCAGGAAAA +
Preference number: 4 (lower is better)
Translates to: QIMFSKSQHVPCSRLLAGGERCL*LLSSGK
Trigger: TTTTCCTGACGACAGCAGTCACAAACAGCGCTCGCC...ACCTGCTAAGAGCCGGGAGCATGGAACGTGTTGGGATTTAGAGAACATTATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR TCA 90 bp CTGATGGCACGAAAATTGCTCCTCTTGGCCAGAGAACTGAAGGCATCAGTAATCGGCGAGCGCTGTTTGTaGCTGCTGTCGTCAGGAAAA +
Preference number: 4 (lower is better)
Translates to: LMARKLLLLARELKASVIGERCL*LLSSGK
Trigger: TTTTCCTGACGACAGCAGTCACAAACAGCGCTCGCC...GATTACTGATGCCTTCAGTTCTCTGGCCAAGAGGAGCAATTTTCGTGCCATCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574755.5
CDS-3UTR GCA 90 bp GTTCCATGCTCCCGGCTCTTAGCAGGTAGTTGGTGGACACTTGGTTATAGCAGCATCAGTAATCTTTCCTaGAGCCTTGTCGGTCACCAG +
Preference number: 4 (lower is better)
Translates to: VPCSRLLAGSWWTLGYSSISNLS*SLVGHQ
Trigger: CTGGTGACCGACAAGGCTGCAGGAAAGATTACTGAT...GCTGCTATAACCAAGTGTCCACCAACTACCTGCTAAGAGCCGGGAGCATGGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR GCA 90 bp TTAGCAGGTAGTTGGTGGACACTTGGTTATAGCAGCTGGGTGCCAGATGCCTGCATCAGTAATCTTTCCTaGAGCCTTGTCGGTCACCAG +
Preference number: 4 (lower is better)
Translates to: LAGSWWTLGYSSWVPDACISNLS*SLVGHQ
Trigger: CTGGTGACCGACAAGGCTGCAGGAAAGATTACTGAT...GCAGGCATCTGGCACCCAGCTGCTATAACCAAGTGTCCACCAACTACCTGCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR GCA 90 bp CTCATAAACCACTTGGGAGCAAAGTGCTGTCACAAAGTCCACATCTCTGTCCAACGCCGCTCTAGCACCTaGTCAATGATTCGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: LINHLGAKCCHKVHISVQRRSST*SMIRQL
Trigger: GAGCTGCCGAATCATTGAGCAGGTGCTAGAGCGGCG...TTGGACAGAGATGTGGACTTTGTGACAGCACTTTGCTCCCAAGTGGTTTATGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574755.5
CDS-3UTR GCA 90 bp CTCACACGCATAGAACTTTTGAGGGCTGAAGATCACTTTGTATTTGCGAGTTCGACCTCATCAAGGCCCTaGCAGCTTCGCCGCTCTAGC +
Preference number: 4 (lower is better)
Translates to: LTRIELLRAEDHFVFASSTSSRP*QLRRSS
Trigger: GCTAGAGCGGCGAAGCTGGCAGGGCCTTGATGAGGT...CGAACTCGCAAATACAAAGTGATCTTCAGCCCTCAAAAGTTCTATGCGTGTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574755.5
CDS-3UTR GCA 90 bp TCCCGGCTCTTAGCAGGTAGTTGGTGGACACTTGGTTATAGCAGCTGGGTGCCAAGCGCTGTTTGTGACTaGTGTCGTCAGGAAAATGAA +
Preference number: 4 (lower is better)
Translates to: SRLLAGSWWTLGYSSWVPSAVCD*CRQENE
Trigger: TTCATTTTCCTGACGACAGCAGTCACAAACAGCGCT...TGGCACCCAGCTGCTATAACCAAGTGTCCACCAACTACCTGCTAAGAGCCGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR GCA 90 bp CACATCAAGAGGCAGCAAAGAGAAGGCCCATTCATCACAGCTCACATCTCCATACAGCTGGGTGCCAGATaGCTGCATCTCACTGAGGAA +
Preference number: 4 (lower is better)
Translates to: HIKRQQREGPFITAHISIQLGAR*LHLTEE
Trigger: TTCCTCAGTGAGATGCAGGCATCTGGCACCCAGCTG...TATGGAGATGTGAGCTGTGATGAATGGGCCTTCTCTTTGCTGCCTCTTGATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574755.5
CDS-3UTR GCA 90 bp CAGATAATGTTCTCTAAATCCCAACACGTTCCATGCTCCCGGCTCTTAGCAGGTTCCCAACACGTTCCATaGTCCCGGCTCTTAGCAGGT +
Preference number: 4 (lower is better)
Translates to: QIMFSKSQHVPCSRLLAGSQHVP*SRLLAG
Trigger: ACCTGCTAAGAGCCGGGAGCATGGAACGTGTTGGGA...ACCTGCTAAGAGCCGGGAGCATGGAACGTGTTGGGATTTAGAGAACATTATCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR CCA 90 bp CAGATAATGTTCTCTAAATCCCAACACGTTCCATGCTCCCGGCTCTTAGCAGGTCCAGCCTCTTCAGCATaGAGAAGTCAGGCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: QIMFSKSQHVPCSRLLAGPASSA*RSQAAQ
Trigger: CTGAGCTGCCTGACTTCTCCATGCTGAAGAGGCTGG...ACCTGCTAAGAGCCGGGAGCATGGAACGTGTTGGGATTTAGAGAACATTATCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR CCA 90 bp AAGTTCCGGGCCTTCTGGCTCAAGAAGCCAAAGACATTGGAGAAGTGCTCGTTCAAGTTCCGGGCCTTCTaGCTCAAGAAGCCAAAGACA +
Preference number: 4 (lower is better)
Translates to: KFRAFWLKKPKTLEKCSFKFRAF*LKKPKT
Trigger: TGTCTTTGGCTTCTTGAGCCAGAAGGCCCGGAACTT...GAACGAGCACTTCTCCAATGTCTTTGGCTTCTTGAGCCAGAAGGCCCGGAACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574755.5
CDS-3UTR CCA 90 bp GTTCCATGCTCCCGGCTCTTAGCAGGTAGTTGGTGGACACTTGGTTATAGCAGCCTCGCCGTCCACACGTaGGATCAAATTCAGCTTTTT +
Preference number: 4 (lower is better)
Translates to: VPCSRLLAGSWWTLGYSSLAVHT*DQIQLF
Trigger: AAAAAGCTGAATTTGATCCCACGTGTGGACGGCGAG...GCTGCTATAACCAAGTGTCCACCAACTACCTGCTAAGAGCCGGGAGCATGGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR CCA 90 bp GTTCCGGGCCTTCTGGCTCAAGAAGCCAAAGACATTGGAGAAGTGCTCGTTCCGTTAGCAGGTAGTTGGTaGACACTTGGTTATAGCAGC +
Preference number: 4 (lower is better)
Translates to: VPGLLAQEAKDIGEVLVPLAGSW*TLGYSS
Trigger: GCTGCTATAACCAAGTGTCCACCAACTACCTGCTAA...CGGAACGAGCACTTCTCCAATGTCTTTGGCTTCTTGAGCCAGAAGGCCCGGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574755.5
CDS-3UTR CCA 90 bp TCCCAACACGTTCCATGCTCCCGGCTCTTAGCAGGTAGTTGGTGGACACTTGGTCTCTTAGCAGGTAGTTaGTGGACACTTGGTTATAGC +
Preference number: 4 (lower is better)
Translates to: SQHVPCSRLLAGSWWTLGLLAGS*WTLGYS
Trigger: GCTATAACCAAGTGTCCACCAACTACCTGCTAAGAG...ACCAAGTGTCCACCAACTACCTGCTAAGAGCCGGGAGCATGGAACGTGTTGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR TCA 90 bp GTGCCAGATGCCTGCATCTCACTGAGGAATGTGTTCAGGGAAGATGTCAACACTATTGTTCATTGGAGCTaGGGGCTGGCTTGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: VPDACISLRNVFREDVNTIVHWS*GLACSP
Trigger: TGGAGAACAAGCCAGCCCTCAGCTCCAATGAACAAT...AGTGTTGACATCTTCCCTGAACACATTCCTCAGTGAGATGCAGGCATCTGGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333371.8
ENST00000535906.1
CDS-3UTR TCA 90 bp GTGCCAGATGCCTGCATCTCACTGAGGAATGTGTTCAGGGAAGATGTCAACACTCCTGAGCTACAGTGTTaGTCCAACGCTGATCTCCTT +
Preference number: 4 (lower is better)
Translates to: VPDACISLRNVFREDVNTPELQC*SNADLL
Trigger: AAGGAGATCAGCGTTGGATCAACACTGTAGCTCAGG...AGTGTTGACATCTTCCCTGAACACATTCCTCAGTGAGATGCAGGCATCTGGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR TCA 90 bp GTGCCAGATGCCTGCATCTCACTGAGGAATGTGTTCAGGGAAGATGTCAACACTTCTTGTCAGAGGATGTaGCTTCTGGGCCAAAGTCGA +
Preference number: 4 (lower is better)
Translates to: VPDACISLRNVFREDVNTSCQRM*LLGQSR
Trigger: TCGACTTTGGCCCAGAAGTCACATCCTCTGACAAGA...AGTGTTGACATCTTCCCTGAACACATTCCTCAGTGAGATGCAGGCATCTGGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR TCA 90 bp TGGGATCAAATTCAGCTTTTTGCTGATGGCACGAAAATTGCTCCTCTTGGCCAGTGCTCTCCCGGATGTTaGACCCCTCTAGCAGTGCAT +
Preference number: 4 (lower is better)
Translates to: WDQIQLFADGTKIAPLGQCSPGC*TPLAVH
Trigger: ATGCACTGCTAGAGGGGTTCAACATCCGGGAGAGCA...CTGGCCAAGAGGAGCAATTTTCGTGCCATCAGCAAAAAGCTGAATTTGATCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000574755.5
CDS-3UTR TCA 90 bp GATGCCTGCATCTCACTGAGGAATGTGTTCAGGGAAGATGTCAACACTGGCCGGCCTGGGAGCAGGAAGTaGACTCTTTTCTCAGATAAT +
Preference number: 4 (lower is better)
Translates to: DACISLRNVFREDVNTGRPGSRK*TLFSDN
Trigger: ATTATCTGAGAAAAGAGTTCACTTCCTGCTCCCAGG...CCGGCCAGTGTTGACATCTTCCCTGAACACATTCCTCAGTGAGATGCAGGCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR GCA 90 bp GATGGACAAAAGGCACATGAGGCGCAGGCTTTCTATAGGCGACACCTGCCGGTCAAGACATTGGAGAAGTaGTCGTTCCGAATCTCATTA +
Preference number: 4 (lower is better)
Translates to: DGQKAHEAQAFYRRHLPVKTLEK*SFRISL
Trigger: TAATGAGATTCGGAACGAGCACTTCTCCAATGTCTT...GACCGGCAGGTGTCGCCTATAGAAAGCCTGCGCCTCATGTGCCTTTTGTCCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574755.5
CDS-3UTR GCA 90 bp GGTAGTTGGTGGACACTTGGTTATAGCAGCTGGGTGCCAGATGCCTGCATCTCAAGCGCTGTTTGTGACTaGTGTCGTCAGGAAAATGAA +
Preference number: 4 (lower is better)
Translates to: GSWWTLGYSSWVPDACISSAVCD*CRQENE
Trigger: TTCATTTTCCTGACGACAGCAGTCACAAACAGCGCT...TGAGATGCAGGCATCTGGCACCCAGCTGCTATAACCAAGTGTCCACCAACTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR GCA 90 bp CGAATCTCATTAAACACCTTGTCCTCGGCATTGAGTAGCACCTTCAGGCTCTTGGTTATAGCAGCTGGGTaGCAGATGCCTGCATCTCAC +
Preference number: 4 (lower is better)
Translates to: RISLNTLSSALSSTFRLLVIAAG*QMPASH
Trigger: GTGAGATGCAGGCATCTGGCACCCAGCTGCTATAAC...CAAGAGCCTGAAGGTGCTACTCAATGCCGAGGACAAGGTGTTTAATGAGATTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574755.5
CDS-3UTR CCA 90 bp TTAGCAGGTAGTTGGTGGACACTTGGTTATAGCAGCTGGGTGCCAGATGCCTGCCGTGTTGCTTCAGGATaGAGACATTGGCAATTCGAT +
Preference number: 4 (lower is better)
Translates to: LAGSWWTLGYSSWVPDACRVASG*RHWQFD
Trigger: ATCGAATTGCCAATGTCTCCATCCTGAAGCAACACG...GCAGGCATCTGGCACCCAGCTGCTATAACCAAGTGTCCACCAACTACCTGCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333371.8
CDS-3UTR CCA 90 bp GTTCCATGCTCCCGGCTCTTAGCAGGTAGTTGGTGGACACTTGGTTATAGCAGCATTCATATGCCATCTTaGCGCACCTGCCAATTCCAT +
Preference number: 4 (lower is better)
Translates to: VPCSRLLAGSWWTLGYSSIHMPS*RTCQFH
Trigger: ATGGAATTGGCAGGTGCGCCAAGATGGCATATGAAT...GCTGCTATAACCAAGTGTCCACCAACTACCTGCTAAGAGCCGGGAGCATGGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR CCA 90 bp TTAGCAGGTAGTTGGTGGACACTTGGTTATAGCAGCTGGGTGCCAGATGCCTGCATTCATATGCCATCTTaGCGCACCTGCCAATTCCAT +
Preference number: 4 (lower is better)
Translates to: LAGSWWTLGYSSWVPDACIHMPS*RTCQFH
Trigger: ATGGAATTGGCAGGTGCGCCAAGATGGCATATGAAT...GCAGGCATCTGGCACCCAGCTGCTATAACCAAGTGTCCACCAACTACCTGCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR CCA 90 bp GTGCCAGATGCCTGCATCTCACTGAGGAATGTGTTCAGGGAAGATGTCAACACTGATATGTCCAATCTCTaGCCTTCGGCCCTTGGTTTC +
Preference number: 4 (lower is better)
Translates to: VPDACISLRNVFREDVNTDMSNL*PSALGF
Trigger: GAAACCAAGGGCCGAAGGCCAGAGATTGGACATATC...AGTGTTGACATCTTCCCTGAACACATTCCTCAGTGAGATGCAGGCATCTGGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR CCA 90 bp TCCCAACACGTTCCATGCTCCCGGCTCTTAGCAGGTAGTTGGTGGACACTTGGTGTCTTGATTAGCTCCTaGAAATCCTGCTTGGTTTTC +
Preference number: 4 (lower is better)
Translates to: SQHVPCSRLLAGSWWTLGVLISS*KSCLVF
Trigger: GAAAACCAAGCAGGATTTCCAGGAGCTAATCAAGAC...ACCAAGTGTCCACCAACTACCTGCTAAGAGCCGGGAGCATGGAACGTGTTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR CCA 90 bp AGCTGGGTGCCAGATGCCTGCATCTCACTGAGGAATGTGTTCAGGGAAGATGTCGAGATCGGTAATCCTTaGGGATCAAACCATTCTCAG +
Preference number: 4 (lower is better)
Translates to: SWVPDACISLRNVFREDVEIGNP*GSNHSQ
Trigger: CTGAGAATGGTTTGATCCCCAAGGATTACCGATCTC...GACATCTTCCCTGAACACATTCCTCAGTGAGATGCAGGCATCTGGCACCCAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR CCA 90 bp TTCTCTAAATCCCAACACGTTCCATGCTCCCGGCTCTTAGCAGGTAGTTGGTGGCTCGCCGTCCACACGTaGGATCAAATTCAGCTTTTT +
Preference number: 4 (lower is better)
Translates to: FSKSQHVPCSRLLAGSWWLAVHT*DQIQLF
Trigger: AAAAAGCTGAATTTGATCCCACGTGTGGACGGCGAG...CCACCAACTACCTGCTAAGAGCCGGGAGCATGGAACGTGTTGGGATTTAGAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR CCA 90 bp AGCTGGGTGCCAGATGCCTGCATCTCACTGAGGAATGTGTTCAGGGAAGATGTCTTAGCAGGTAGTTGGTaGACACTTGGTTATAGCAGC +
Preference number: 4 (lower is better)
Translates to: SWVPDACISLRNVFREDVLAGSW*TLGYSS
Trigger: GCTGCTATAACCAAGTGTCCACCAACTACCTGCTAA...GACATCTTCCCTGAACACATTCCTCAGTGAGATGCAGGCATCTGGCACCCAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR CCA 90 bp TTAGCAGGTAGTTGGTGGACACTTGGTTATAGCAGCTGGGTGCCAGATGCCTGCTTAGCAGGTAGTTGGTaGACACTTGGTTATAGCAGC +
Preference number: 4 (lower is better)
Translates to: LAGSWWTLGYSSWVPDACLAGSW*TLGYSS
Trigger: GCTGCTATAACCAAGTGTCCACCAACTACCTGCTAA...GCAGGCATCTGGCACCCAGCTGCTATAACCAAGTGTCCACCAACTACCTGCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR CCA 90 bp CAGGTAGTTGGTGGACACTTGGTTATAGCAGCTGGGTGCCAGATGCCTGCATCTCTCTTAGCAGGTAGTTaGTGGACACTTGGTTATAGC +
Preference number: 4 (lower is better)
Translates to: QVVGGHLVIAAGCQMPASLLAGS*WTLGYS
Trigger: GCTATAACCAAGTGTCCACCAACTACCTGCTAAGAG...AGATGCAGGCATCTGGCACCCAGCTGCTATAACCAAGTGTCCACCAACTACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
3UTR CAA 72 bp TACTCGCCGTCCACACGTGGGATCAAATTCAGCTTTTaGCTGATGGCACGAAAATTGCTCCTCTTGGCCAGA +
Preference number: 4 (lower is better)
Translates to: YSPSTRGIKFSF*LMARKLLLLAR
Trigger: TCTGGCCAAGAGGAGCAATTTTCGTGCCATCAGCAAAAAGCTGAATTTGATCCCACGTGTGGACGGCGAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574755.5
CDS-3UTR TCA 90 bp AGCACCTTCAGGCTCTTGTCAGAGGATGTGACTTCTGGGCCAAAGTCGACACTCCCAATTTGTCAGCATTaGCAAGACTGGCAATGTATC +
Preference number: 4 (lower is better)
Translates to: STFRLLSEDVTSGPKSTLPICQH*QDWQCI
Trigger: GATACATTGCCAGTCTTGTCAATGCTGACAAATTGG...GAGTGTCGACTTTGGCCCAGAAGTCACATCCTCTGACAAGAGCCTGAAGGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574755.5
CDS-3UTR TCA 90 bp TCCCGGCTCTTAGCAGGTAGTTGGTGGACACTTGGTTATAGCAGCTGGGTGCCAAGAACTTTTGAGGGCTaGAGATCACTTTGTATTTGC +
Preference number: 4 (lower is better)
Translates to: SRLLAGSWWTLGYSSWVPRTFEG*RSLCIC
Trigger: GCAAATACAAAGTGATCTTCAGCCCTCAAAAGTTCT...TGGCACCCAGCTGCTATAACCAAGTGTCCACCAACTACCTGCTAAGAGCCGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR TCA 90 bp GGTAGTTGGTGGACACTTGGTTATAGCAGCTGGGTGCCAGATGCCTGCATCTCAAATTCAGCTTTTTGCTaGTGGCACGAAAATTGCTCC +
Preference number: 4 (lower is better)
Translates to: GSWWTLGYSSWVPDACISNSAFC*WHENCS
Trigger: GGAGCAATTTTCGTGCCATCAGCAAAAAGCTGAATT...TGAGATGCAGGCATCTGGCACCCAGCTGCTATAACCAAGTGTCCACCAACTACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR TCA 90 bp TCCTCCAGGTTCCTCCACAATTCATATGCCATCTTGGCGCACCTGCCAATTCCACCTGGGAGCAGGAAGTaGACTCTTTTCTCAGATAAT +
Preference number: 4 (lower is better)
Translates to: SSRFLHNSYAILAHLPIPPGSRK*TLFSDN
Trigger: ATTATCTGAGAAAAGAGTTCACTTCCTGCTCCCAGG...TGGAATTGGCAGGTGCGCCAAGATGGCATATGAATTGTGGAGGAACCTGGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574755.5
CDS-3UTR GCA 90 bp CAGGTAGTTGGTGGACACTTGGTTATAGCAGCTGGGTGCCAGATGCCTGCATCTATTCTGGTAGTTCCATaGTCAGCAGATCCACATCAA +
Preference number: 4 (lower is better)
Translates to: QVVGGHLVIAAGCQMPASILVVP*SADPHQ
Trigger: TTGATGTGGATCTGCTGAGCATGGAACTACCAGAAT...AGATGCAGGCATCTGGCACCCAGCTGCTATAACCAAGTGTCCACCAACTACCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR GCA 90 bp GATGCCTGCATCTCACTGAGGAATGTGTTCAGGGAAGATGTCAACACTGGCCGGATTCTGGTAGTTCCATaGTCAGCAGATCCACATCAA +
Preference number: 4 (lower is better)
Translates to: DACISLRNVFREDVNTGRILVVP*SADPHQ
Trigger: TTGATGTGGATCTGCTGAGCATGGAACTACCAGAAT...CCGGCCAGTGTTGACATCTTCCCTGAACACATTCCTCAGTGAGATGCAGGCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR GCA 90 bp GCAGGTAGTTGGTGGACACTTGGTTATAGCAGCTGGGTGCCAGATGCCTGCATCAAGACATTGGAGAAGTaGTCGTTCCGAATCTCATTA +
Preference number: 4 (lower is better)
Translates to: AGSWWTLGYSSWVPDACIKTLEK*SFRISL
Trigger: TAATGAGATTCGGAACGAGCACTTCTCCAATGTCTT...GATGCAGGCATCTGGCACCCAGCTGCTATAACCAAGTGTCCACCAACTACCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR GCA 90 bp CAGATAATGTTCTCTAAATCCCAACACGTTCCATGCTCCCGGCTCTTAGCAGGTCCCTCTAGCAGTGCATaGTCAGTCTTGATTAGCTCC +
Preference number: 4 (lower is better)
Translates to: QIMFSKSQHVPCSRLLAGPSSSA*SVLISS
Trigger: GGAGCTAATCAAGACTGAGCATGCACTGCTAGAGGG...ACCTGCTAAGAGCCGGGAGCATGGAACGTGTTGGGATTTAGAGAACATTATCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR CCA 90 bp TTTCAGGCCCTTGAGCTCCTGGGACACGAAATTCTTCATCTGCTTAATGTCCATCACTCCAGGAATGAATaGCCACCTCCAGGCAAGAGA +
Preference number: 4 (lower is better)
Translates to: FQALELLGHEILHLLNVHHSRNE*PPPGKR
Trigger: TCTCTTGCCTGGAGGTGGCCATTCATTCCTGGAGTG...ATGGACATTAAGCAGATGAAGAATTTCGTGTCCCAGGAGCTCAAGGGCCTGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574755.5
CDS-3UTR CCA 90 bp CAGATAATGTTCTCTAAATCCCAACACGTTCCATGCTCCCGGCTCTTAGCAGGTGATATGTCCAATCTCTaGCCTTCGGCCCTTGGTTTC +
Preference number: 4 (lower is better)
Translates to: QIMFSKSQHVPCSRLLAGDMSNL*PSALGF
Trigger: GAAACCAAGGGCCGAAGGCCAGAGATTGGACATATC...ACCTGCTAAGAGCCGGGAGCATGGAACGTGTTGGGATTTAGAGAACATTATCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR CCA 90 bp TTCTCTAAATCCCAACACGTTCCATGCTCCCGGCTCTTAGCAGGTAGTTGGTGGAGAAGCCAAAGACATTaGAGAAGTGCTCGTTCCGAA +
Preference number: 4 (lower is better)
Translates to: FSKSQHVPCSRLLAGSWWRSQRH*RSARSE
Trigger: TTCGGAACGAGCACTTCTCCAATGTCTTTGGCTTCT...CCACCAACTACCTGCTAAGAGCCGGGAGCATGGAACGTGTTGGGATTTAGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR CCA 90 bp CAGATAATGTTCTCTAAATCCCAACACGTTCCATGCTCCCGGCTCTTAGCAGGTAAGTTCCGGGCCTTCTaGCTCAAGAAGCCAAAGACA +
Preference number: 4 (lower is better)
Translates to: QIMFSKSQHVPCSRLLAGKFRAF*LKKPKT
Trigger: TGTCTTTGGCTTCTTGAGCCAGAAGGCCCGGAACTT...ACCTGCTAAGAGCCGGGAGCATGGAACGTGTTGGGATTTAGAGAACATTATCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR CCA 90 bp AGCTGGGTGCCAGATGCCTGCATCTCACTGAGGAATGTGTTCAGGGAAGATGTCGTCTTGATTAGCTCCTaGAAATCCTGCTTGGTTTTC +
Preference number: 4 (lower is better)
Translates to: SWVPDACISLRNVFREDVVLISS*KSCLVF
Trigger: GAAAACCAAGCAGGATTTCCAGGAGCTAATCAAGAC...GACATCTTCCCTGAACACATTCCTCAGTGAGATGCAGGCATCTGGCACCCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR CCA 90 bp TTCTCTAAATCCCAACACGTTCCATGCTCCCGGCTCTTAGCAGGTAGTTGGTGGGAGATCGGTAATCCTTaGGGATCAAACCATTCTCAG +
Preference number: 4 (lower is better)
Translates to: FSKSQHVPCSRLLAGSWWEIGNP*GSNHSQ
Trigger: CTGAGAATGGTTTGATCCCCAAGGATTACCGATCTC...CCACCAACTACCTGCTAAGAGCCGGGAGCATGGAACGTGTTGGGATTTAGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR TCA 90 bp TTAGCAGGTAGTTGGTGGACACTTGGTTATAGCAGCTGGGTGCCAGATGCCTGCAGAACTTTTGAGGGCTaGAGATCACTTTGTATTTGC +
Preference number: 4 (lower is better)
Translates to: LAGSWWTLGYSSWVPDACRTFEG*RSLCIC
Trigger: GCAAATACAAAGTGATCTTCAGCCCTCAAAAGTTCT...GCAGGCATCTGGCACCCAGCTGCTATAACCAAGTGTCCACCAACTACCTGCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR TCA 90 bp CAGATAATGTTCTCTAAATCCCAACACGTTCCATGCTCCCGGCTCTTAGCAGGTAGAAGGTGTAAGGCCTaGGCTACAGTGTTGATCCAA +
Preference number: 4 (lower is better)
Translates to: QIMFSKSQHVPCSRLLAGRRCKA*ATVLIQ
Trigger: TTGGATCAACACTGTAGCTCAGGCCTTACACCTTCT...ACCTGCTAAGAGCCGGGAGCATGGAACGTGTTGGGATTTAGAGAACATTATCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR TCA 90 bp AGCTCCTGGAAATCCTGCTTGGTTTTCTTCTTCATGATGGATTCACAGGCCCCAAGAAGGTGTAAGGCCTaGGCTACAGTGTTGATCCAA +
Preference number: 4 (lower is better)
Translates to: SSWKSCLVFFFMMDSQAPRRCKA*ATVLIQ
Trigger: TTGGATCAACACTGTAGCTCAGGCCTTACACCTTCT...TGGGGCCTGTGAATCCATCATGAAGAAGAAAACCAAGCAGGATTTCCAGGAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574755.5
CDS-3UTR TCA 90 bp CACATCAAGAGGCAGCAAAGAGAAGGCCCATTCATCACAGCTCACATCTCCATAGTGCATGCTCAGTCTTaGTTAGCTCCTGGAAATCCT +
Preference number: 4 (lower is better)
Translates to: HIKRQQREGPFITAHISIVHAQS*LAPGNP
Trigger: AGGATTTCCAGGAGCTAATCAAGACTGAGCATGCAC...TATGGAGATGTGAGCTGTGATGAATGGGCCTTCTCTTTGCTGCCTCTTGATGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574755.5
CDS-3UTR GCA 90 bp CAAGTTCCGGGCCTTCTGGCTCAAGAAGCCAAAGACATTGGAGAAGTGCTCGTTATTCTGGTAGTTCCATaGTCAGCAGATCCACATCAA +
Preference number: 4 (lower is better)
Translates to: QVPGLLAQEAKDIGEVLVILVVP*SADPHQ
Trigger: TTGATGTGGATCTGCTGAGCATGGAACTACCAGAAT...AACGAGCACTTCTCCAATGTCTTTGGCTTCTTGAGCCAGAAGGCCCGGAACTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574755.5
CDS-3UTR GCA 90 bp AGCTGGGTGCCAGATGCCTGCATCTCACTGAGGAATGTGTTCAGGGAAGATGTCAAGACATTGGAGAAGTaGTCGTTCCGAATCTCATTA +
Preference number: 4 (lower is better)
Translates to: SWVPDACISLRNVFREDVKTLEK*SFRISL
Trigger: TAATGAGATTCGGAACGAGCACTTCTCCAATGTCTT...GACATCTTCCCTGAACACATTCCTCAGTGAGATGCAGGCATCTGGCACCCAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR GCA 90 bp CAGGTAGTTGGTGGACACTTGGTTATAGCAGCTGGGTGCCAGATGCCTGCATCTACGAAATTCTTCATCTaGTTAATGTCCATGCCTCTC +
Preference number: 4 (lower is better)
Translates to: QVVGGHLVIAAGCQMPASTKFFI*LMSMPL
Trigger: GAGAGGCATGGACATTAAGCAGATGAAGAATTTCGT...AGATGCAGGCATCTGGCACCCAGCTGCTATAACCAAGTGTCCACCAACTACCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR GCA 90 bp TTTCAGGCCCTTGAGCTCCTGGGACACGAAATTCTTCATCTGCTTAATGTCCATTCTATAGGCGACACCTaGCGGTCTATGTGTTCCTCA +
Preference number: 4 (lower is better)
Translates to: FQALELLGHEILHLLNVHSIGDT*RSMCSS
Trigger: TGAGGAACACATAGACCGGCAGGTGTCGCCTATAGA...ATGGACATTAAGCAGATGAAGAATTTCGTGTCCCAGGAGCTCAAGGGCCTGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574755.5
CDS-3UTR CCA 90 bp GTGCCAGATGCCTGCATCTCACTGAGGAATGTGTTCAGGGAAGATGTCAACACTAGAAGCCAAAGACATTaGAGAAGTGCTCGTTCCGAA +
Preference number: 4 (lower is better)
Translates to: VPDACISLRNVFREDVNTRSQRH*RSARSE
Trigger: TTCGGAACGAGCACTTCTCCAATGTCTTTGGCTTCT...AGTGTTGACATCTTCCCTGAACACATTCCTCAGTGAGATGCAGGCATCTGGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR TCA 90 bp GTGCCAGATGCCTGCATCTCACTGAGGAATGTGTTCAGGGAAGATGTCAACACTCCAATTTGTCAGCATTaGCAAGACTGGCAATGTATC +
Preference number: 4 (lower is better)
Translates to: VPDACISLRNVFREDVNTPICQH*QDWQCI
Trigger: GATACATTGCCAGTCTTGTCAATGCTGACAAATTGG...AGTGTTGACATCTTCCCTGAACACATTCCTCAGTGAGATGCAGGCATCTGGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR TCA 90 bp CAGATAATGTTCTCTAAATCCCAACACGTTCCATGCTCCCGGCTCTTAGCAGGTCCTGGGAGCAGGAAGTaGACTCTTTTCTCAGATAAT +
Preference number: 4 (lower is better)
Translates to: QIMFSKSQHVPCSRLLAGPGSRK*TLFSDN
Trigger: ATTATCTGAGAAAAGAGTTCACTTCCTGCTCCCAGG...ACCTGCTAAGAGCCGGGAGCATGGAACGTGTTGGGATTTAGAGAACATTATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR GCA 90 bp TTCTCTAAATCCCAACACGTTCCATGCTCCCGGCTCTTAGCAGGTAGTTGGTGGACGAAATTCTTCATCTaGTTAATGTCCATGCCTCTC +
Preference number: 4 (lower is better)
Translates to: FSKSQHVPCSRLLAGSWWTKFFI*LMSMPL
Trigger: GAGAGGCATGGACATTAAGCAGATGAAGAATTTCGT...CCACCAACTACCTGCTAAGAGCCGGGAGCATGGAACGTGTTGGGATTTAGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR GCA 90 bp TTTCAGGCCCTTGAGCTCCTGGGACACGAAATTCTTCATCTGCTTAATGTCCATATCAGTAATCTTTCCTaGAGCCTTGTCGGTCACCAG +
Preference number: 4 (lower is better)
Translates to: FQALELLGHEILHLLNVHISNLS*SLVGHQ
Trigger: CTGGTGACCGACAAGGCTGCAGGAAAGATTACTGAT...ATGGACATTAAGCAGATGAAGAATTTCGTGTCCCAGGAGCTCAAGGGCCTGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574755.5
CDS-3UTR GCA 90 bp CAGATAATGTTCTCTAAATCCCAACACGTTCCATGCTCCCGGCTCTTAGCAGGTAGCGCTGTTTGTGACTaGTGTCGTCAGGAAAATGAA +
Preference number: 4 (lower is better)
Translates to: QIMFSKSQHVPCSRLLAGSAVCD*CRQENE
Trigger: TTCATTTTCCTGACGACAGCAGTCACAAACAGCGCT...ACCTGCTAAGAGCCGGGAGCATGGAACGTGTTGGGATTTAGAGAACATTATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR CCA 90 bp CACATCAAGAGGCAGCAAAGAGAAGGCCCATTCATCACAGCTCACATCTCCATAATTCATATGCCATCTTaGCGCACCTGCCAATTCCAT +
Preference number: 4 (lower is better)
Translates to: HIKRQQREGPFITAHISIIHMPS*RTCQFH
Trigger: ATGGAATTGGCAGGTGCGCCAAGATGGCATATGAAT...TATGGAGATGTGAGCTGTGATGAATGGGCCTTCTCTTTGCTGCCTCTTGATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574755.5
CDS-3UTR CCA 90 bp CAGATAATGTTCTCTAAATCCCAACACGTTCCATGCTCCCGGCTCTTAGCAGGTGAGATCGGTAATCCTTaGGGATCAAACCATTCTCAG +
Preference number: 4 (lower is better)
Translates to: QIMFSKSQHVPCSRLLAGEIGNP*GSNHSQ
Trigger: CTGAGAATGGTTTGATCCCCAAGGATTACCGATCTC...ACCTGCTAAGAGCCGGGAGCATGGAACGTGTTGGGATTTAGAGAACATTATCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR CCA 90 bp CACATCAAGAGGCAGCAAAGAGAAGGCCCATTCATCACAGCTCACATCTCCATACTCTTAGCAGGTAGTTaGTGGACACTTGGTTATAGC +
Preference number: 4 (lower is better)
Translates to: HIKRQQREGPFITAHISILLAGS*WTLGYS
Trigger: GCTATAACCAAGTGTCCACCAACTACCTGCTAAGAG...TATGGAGATGTGAGCTGTGATGAATGGGCCTTCTCTTTGCTGCCTCTTGATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574755.5
CDS-3UTR TCA 90 bp CAGATAATGTTCTCTAAATCCCAACACGTTCCATGCTCCCGGCTCTTAGCAGGTCCAATTTGTCAGCATTaGCAAGACTGGCAATGTATC +
Preference number: 4 (lower is better)
Translates to: QIMFSKSQHVPCSRLLAGPICQH*QDWQCI
Trigger: GATACATTGCCAGTCTTGTCAATGCTGACAAATTGG...ACCTGCTAAGAGCCGGGAGCATGGAACGTGTTGGGATTTAGAGAACATTATCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR TCA 90 bp CAGATAATGTTCTCTAAATCCCAACACGTTCCATGCTCCCGGCTCTTAGCAGGTAATTCAGCTTTTTGCTaGTGGCACGAAAATTGCTCC +
Preference number: 4 (lower is better)
Translates to: QIMFSKSQHVPCSRLLAGNSAFC*WHENCS
Trigger: GGAGCAATTTTCGTGCCATCAGCAAAAAGCTGAATT...ACCTGCTAAGAGCCGGGAGCATGGAACGTGTTGGGATTTAGAGAACATTATCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR TCA 90 bp CGAATCTCATTAAACACCTTGTCCTCGGCATTGAGTAGCACCTTCAGGCTCTTGAATTCAGCTTTTTGCTaGTGGCACGAAAATTGCTCC +
Preference number: 4 (lower is better)
Translates to: RISLNTLSSALSSTFRLLNSAFC*WHENCS
Trigger: GGAGCAATTTTCGTGCCATCAGCAAAAAGCTGAATT...CAAGAGCCTGAAGGTGCTACTCAATGCCGAGGACAAGGTGTTTAATGAGATTCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574755.5
3UTR CAA 72 bp GGGATCAAATTCAGCTTTTTGCTGATGGCACGAAAATaGCTCCTCTTGGCCAGAGAACTGAAGGCATCAGTA +
Preference number: 4 (lower is better)
Translates to: GIKFSFLLMARK*LLLARELKASV
Trigger: TACTGATGCCTTCAGTTCTCTGGCCAAGAGGAGCAATTTTCGTGCCATCAGCAAAAAGCTGAATTTGATCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574755.5
CDS-3UTR CCA 90 bp CTCATAAACCACTTGGGAGCAAAGTGCTGTCACAAAGTCCACATCTCTGTCCAAGCACAATCTTCAGGATaGAGACATTGGCAATTCGAT +
Preference number: 4 (lower is better)
Translates to: LINHLGAKCCHKVHISVQAQSSG*RHWQFD
Trigger: ATCGAATTGCCAATGTCTCCATCCTGAAGATTGTGC...TTGGACAGAGATGTGGACTTTGTGACAGCACTTTGCTCCCAAGTGGTTTATGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574755.5
3UTR CAA 72 bp TTCAGCTTTTTGCTGATGGCACGAAAATTGCTCCTCTaGGCCAGAGAACTGAAGGCATCAGTAATCTTTCCT +
Preference number: 4 (lower is better)
Translates to: FSFLLMARKLLL*ARELKASVIFP
Trigger: AGGAAAGATTACTGATGCCTTCAGTTCTCTGGCCAAGAGGAGCAATTTTCGTGCCATCAGCAAAAAGCTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574755.5
CDS-3UTR TCA 90 bp TGTCATCTACTAGGCCCTCATAAACCACTTGGGAGCAAAGTGCTGTCACAAAGTAGAACTTTTGAGGGCTaGAGATCACTTTGTATTTGC +
Preference number: 4 (lower is better)
Translates to: CHLLGPHKPLGSKVLSQSRTFEG*RSLCIC
Trigger: GCAAATACAAAGTGATCTTCAGCCCTCAAAAGTTCT...ACTTTGTGACAGCACTTTGCTCCCAAGTGGTTTATGAGGGCCTAGTAGATGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574755.5
CDS-3UTR GCA 90 bp CTCATAAACCACTTGGGAGCAAAGTGCTGTCACAAAGTCCACATCTCTGTCCAAACGAAATTCTTCATCTaGTTAATGTCCATGCCTCTC +
Preference number: 4 (lower is better)
Translates to: LINHLGAKCCHKVHISVQTKFFI*LMSMPL
Trigger: GAGAGGCATGGACATTAAGCAGATGAAGAATTTCGT...TTGGACAGAGATGTGGACTTTGTGACAGCACTTTGCTCCCAAGTGGTTTATGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574755.5
CDS TCA 90 bp GCCTTGTCTCAGACCTGCAGCCACCGTGTCTCGACCCTCCCTCCCTaGTCCACTCTGCCCGTCAGCAGGATTCCGGTCTACACCCCGCAG +
Preference number: 5 (lower is better)
Translates to: ALSQTCSHRVSTLPP*STLPVSRIPVYTPQ
Trigger: CTGCGGGGTGTAGACCGGAATCCTGCTGACGGGCAGAGTGGATCAGGGAGGGAGGGTCGAGACACGGTGGCTGCAGGTCTGAGACAAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000556096.6
ENST00000557358.1
CDS GCA 90 bp AGACCTGCAGCCACCGTGTCTCGACCCTCCCTCCCTGATCCACTCTaGCCGTCAGCAGGATTCCGGTCTACACCCCGCAGAGACTCCGCA +
Preference number: 5 (lower is better)
Translates to: RPAATVSRPSLPDPL*PSAGFRSTPRRDSA
Trigger: TGCGGAGTCTCTGCGGGGTGTAGACCGGAATCCTGCTGACGGGCAGAGTGGATCAGGGAGGGAGGGTCGAGACACGGTGGCTGCAGGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000556096.6
ENST00000557358.1
CDS CCA 90 bp GGGGCTATCCTTCAGGCCTGGGCACCGACTTCCAGAGACCCCAGATaGGCCCTCGCTCCTCAGCAGCACTCCAGGAATGAATGGCCACCT +
Preference number: 5 (lower is better)
Translates to: GAILQAWAPTSRDPR*ALAPQQHSRNEWPP
Trigger: AGGTGGCCATTCATTCCTGGAGTGCTGCTGAGGAGCGAGGGCCCATCTGGGGTCTCTGGAAGTCGGTGCCCAGGCCTGAAGGATAGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000556096.6
ENST00000557358.1
ENST00000574755.5
CDS GCA 90 bp GGAAGCCAGCAGTTCATTCAGGGTCTGGGTCTCTCCCACAAACCCTaGCCCACGTGGGAGGTGCCAAGGCTGATGACCCGTCCATCTTGC +
Preference number: 5 (lower is better)
Translates to: GSQQFIQGLGLSHKP*PTWEVPRLMTRPSC
Trigger: GCAAGATGGACGGGTCATCAGCCTTGGCACCTCCCACGTGGGGCAGGGTTTGTGGGAGAGACCCAGACCCTGAATGAACTGCTGGCTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556096.6
CDS CCA 90 bp GACCCCAGATGGGCCCTCGCTCCTCAGCAGCACTCCAGGAATGAATaGCCACCTCCAGGCAAGAGAGCTACTACCTCGGAGCAGCCTTGT +
Preference number: 5 (lower is better)
Translates to: DPRWALAPQQHSRNE*PPPGKRATTSEQPC
Trigger: ACAAGGCTGCTCCGAGGTAGTAGCTCTCTTGCCTGGAGGTGGCCATTCATTCCTGGAGTGCTGCTGAGGAGCGAGGGCCCATCTGGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000556096.6
ENST00000557358.1
ENST00000574755.5
CDS CCA 90 bp CAGTTCATTCAGGGTCTGGGTCTCTCCCACAAACCCTGCCCCACGTaGGAGGTGCCAAGGCTGATGACCCGTCCATCTTGCCAAGATGCA +
Preference number: 5 (lower is better)
Translates to: QFIQGLGLSHKPCPT*EVPRLMTRPSCQDA
Trigger: TGCATCTTGGCAAGATGGACGGGTCATCAGCCTTGGCACCTCCCACGTGGGGCAGGGTTTGTGGGAGAGACCCAGACCCTGAATGAACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556096.6
CDS-3UTR CAA 90 bp TCCCAACACGTTCCATGCTCCCGGCTCTTAGCAGGTAGTTGGTGGACACTTGGTTCTGGCCTTCGGCCCTaGGTTTCGCCATCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: SQHVPCSRLLAGSWWTLGSGLRP*VSPSSS
Trigger: GGAGGAGGATGGCGAAACCAAGGGCCGAAGGCCAGA...ACCAAGTGTCCACCAACTACCTGCTAAGAGCCGGGAGCATGGAACGTGTTGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR CAA 90 bp TCCCGGCTCTTAGCAGGTAGTTGGTGGACACTTGGTTATAGCAGCTGGGTGCCATACCTCGGAGCAGCCTaGTCTCAGACCTGCAGCCAC +
Preference number: 5 (lower is better)
Translates to: SRLLAGSWWTLGYSSWVPYLGAA*SQTCSH
Trigger: GTGGCTGCAGGTCTGAGACAAGGCTGCTCCGAGGTA...TGGCACCCAGCTGCTATAACCAAGTGTCCACCAACTACCTGCTAAGAGCCGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR CAA 90 bp AGCTGGGTGCCAGATGCCTGCATCTCACTGAGGAATGTGTTCAGGGAAGATGTCTCTGGCCTTCGGCCCTaGGTTTCGCCATCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: SWVPDACISLRNVFREDVSGLRP*VSPSSS
Trigger: GGAGGAGGATGGCGAAACCAAGGGCCGAAGGCCAGA...GACATCTTCCCTGAACACATTCCTCAGTGAGATGCAGGCATCTGGCACCCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR CAA 90 bp AAGTTCCGGGCCTTCTGGCTCAAGAAGCCAAAGACATTGGAGAAGTGCTCGTTCTCTGGCCTTCGGCCCTaGGTTTCGCCATCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: KFRAFWLKKPKTLEKCSFSGLRP*VSPSSS
Trigger: GGAGGAGGATGGCGAAACCAAGGGCCGAAGGCCAGA...GAACGAGCACTTCTCCAATGTCTTTGGCTTCTTGAGCCAGAAGGCCCGGAACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574755.5
CDS-3UTR CAA 90 bp GATGGACAAAAGGCACATGAGGCGCAGGCTTTCTATAGGCGACACCTGCCGGTCACCTTGTCCTCGGCATaGAGTAGCACCTTCAGGCTC +
Preference number: 5 (lower is better)
Translates to: DGQKAHEAQAFYRRHLPVTLSSA*SSTFRL
Trigger: GAGCCTGAAGGTGCTACTCAATGCCGAGGACAAGGT...GACCGGCAGGTGTCGCCTATAGAAAGCCTGCGCCTCATGTGCCTTTTGTCCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574755.5
CDS-3UTR CAA 90 bp GCAGGTAGTTGGTGGACACTTGGTTATAGCAGCTGGGTGCCAGATGCCTGCATCGTGCTCTCCCGGATGTaGAACCCCTCTAGCAGTGCA +
Preference number: 5 (lower is better)
Translates to: AGSWWTLGYSSWVPDACIVLSRM*NPSSSA
Trigger: TGCACTGCTAGAGGGGTTCAACATCCGGGAGAGCAC...GATGCAGGCATCTGGCACCCAGCTGCTATAACCAAGTGTCCACCAACTACCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR CAA 90 bp TCCCGGCTCTTAGCAGGTAGTTGGTGGACACTTGGTTATAGCAGCTGGGTGCCAGTGCTCTCCCGGATGTaGAACCCCTCTAGCAGTGCA +
Preference number: 5 (lower is better)
Translates to: SRLLAGSWWTLGYSSWVPVLSRM*NPSSSA
Trigger: TGCACTGCTAGAGGGGTTCAACATCCGGGAGAGCAC...TGGCACCCAGCTGCTATAACCAAGTGTCCACCAACTACCTGCTAAGAGCCGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR CAA 90 bp AAGTTCCGGGCCTTCTGGCTCAAGAAGCCAAAGACATTGGAGAAGTGCTCGTTCTACCTCGGAGCAGCCTaGTCTCAGACCTGCAGCCAC +
Preference number: 5 (lower is better)
Translates to: KFRAFWLKKPKTLEKCSFYLGAA*SQTCSH
Trigger: GTGGCTGCAGGTCTGAGACAAGGCTGCTCCGAGGTA...GAACGAGCACTTCTCCAATGTCTTTGGCTTCTTGAGCCAGAAGGCCCGGAACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574755.5
CDS-3UTR CAA 90 bp TCCCAACACGTTCCATGCTCCCGGCTCTTAGCAGGTAGTTGGTGGACACTTGGTGAGCTGAGGGCTGGCTaGTTCTCCACCTTGTATAGC +
Preference number: 5 (lower is better)
Translates to: SQHVPCSRLLAGSWWTLGELRAG*FSTLYS
Trigger: GCTATACAAGGTGGAGAACAAGCCAGCCCTCAGCTC...ACCAAGTGTCCACCAACTACCTGCTAAGAGCCGGGAGCATGGAACGTGTTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333371.8
ENST00000535906.1
CDS-3UTR CAA 90 bp GCAGGTAGTTGGTGGACACTTGGTTATAGCAGCTGGGTGCCAGATGCCTGCATCACCTTGTCCTCGGCATaGAGTAGCACCTTCAGGCTC +
Preference number: 5 (lower is better)
Translates to: AGSWWTLGYSSWVPDACITLSSA*SSTFRL
Trigger: GAGCCTGAAGGTGCTACTCAATGCCGAGGACAAGGT...GATGCAGGCATCTGGCACCCAGCTGCTATAACCAAGTGTCCACCAACTACCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR CAA 90 bp TCCCGGCTCTTAGCAGGTAGTTGGTGGACACTTGGTTATAGCAGCTGGGTGCCAACCTTGTCCTCGGCATaGAGTAGCACCTTCAGGCTC +
Preference number: 5 (lower is better)
Translates to: SRLLAGSWWTLGYSSWVPTLSSA*SSTFRL
Trigger: GAGCCTGAAGGTGCTACTCAATGCCGAGGACAAGGT...TGGCACCCAGCTGCTATAACCAAGTGTCCACCAACTACCTGCTAAGAGCCGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR CAA 90 bp GGTAGTTGGTGGACACTTGGTTATAGCAGCTGGGTGCCAGATGCCTGCATCTCAGTGCTCTCCCGGATGTaGAACCCCTCTAGCAGTGCA +
Preference number: 5 (lower is better)
Translates to: GSWWTLGYSSWVPDACISVLSRM*NPSSSA
Trigger: TGCACTGCTAGAGGGGTTCAACATCCGGGAGAGCAC...TGAGATGCAGGCATCTGGCACCCAGCTGCTATAACCAAGTGTCCACCAACTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR CAA 90 bp TCCCAACACGTTCCATGCTCCCGGCTCTTAGCAGGTAGTTGGTGGACACTTGGTCCAGCTCTTCGCAGATaGGAGAAGGTTAGCAGGTGC +
Preference number: 5 (lower is better)
Translates to: SQHVPCSRLLAGSWWTLGPALRR*EKVSRC
Trigger: GCACCTGCTAACCTTCTCCAATCTGCGAAGAGCTGG...ACCAAGTGTCCACCAACTACCTGCTAAGAGCCGGGAGCATGGAACGTGTTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR CAA 90 bp TCCCGGCTCTTAGCAGGTAGTTGGTGGACACTTGGTTATAGCAGCTGGGTGCCAGCAAAGTCACTGCAGTaGAGCAGCCGTACCACCTCA +
Preference number: 5 (lower is better)
Translates to: SRLLAGSWWTLGYSSWVPAKSLQ*SSRTTS
Trigger: TGAGGTGGTACGGCTGCTCAACTGCAGTGACTTTGC...TGGCACCCAGCTGCTATAACCAAGTGTCCACCAACTACCTGCTAAGAGCCGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR CAA 90 bp GGTAGTTGGTGGACACTTGGTTATAGCAGCTGGGTGCCAGATGCCTGCATCTCAGAGCTGAGGGCTGGCTaGTTCTCCACCTTGTATAGC +
Preference number: 5 (lower is better)
Translates to: GSWWTLGYSSWVPDACISELRAG*FSTLYS
Trigger: GCTATACAAGGTGGAGAACAAGCCAGCCCTCAGCTC...TGAGATGCAGGCATCTGGCACCCAGCTGCTATAACCAAGTGTCCACCAACTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333371.8
ENST00000535906.1
CDS-3UTR CAA 90 bp TCCCAACACGTTCCATGCTCCCGGCTCTTAGCAGGTAGTTGGTGGACACTTGGTTCGACACTCCCACACTaGATGCGGAAGGTGTCATCT +
Preference number: 5 (lower is better)
Translates to: SQHVPCSRLLAGSWWTLGSTLPH*MRKVSS
Trigger: AGATGACACCTTCCGCATCAAGTGTGGGAGTGTCGA...ACCAAGTGTCCACCAACTACCTGCTAAGAGCCGGGAGCATGGAACGTGTTGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR CAA 90 bp GCAGGTAGTTGGTGGACACTTGGTTATAGCAGCTGGGTGCCAGATGCCTGCATCTCGACACTCCCACACTaGATGCGGAAGGTGTCATCT +
Preference number: 5 (lower is better)
Translates to: AGSWWTLGYSSWVPDACISTLPH*MRKVSS
Trigger: AGATGACACCTTCCGCATCAAGTGTGGGAGTGTCGA...GATGCAGGCATCTGGCACCCAGCTGCTATAACCAAGTGTCCACCAACTACCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR CAA 90 bp TTAGCAGGTAGTTGGTGGACACTTGGTTATAGCAGCTGGGTGCCAGATGCCTGCTCCTGTTTCAGGCCCTaGAGCTCCTGGGACACGAAA +
Preference number: 5 (lower is better)
Translates to: LAGSWWTLGYSSWVPDACSCFRP*SSWDTK
Trigger: TTTCGTGTCCCAGGAGCTCAAGGGCCTGAAACAGGA...GCAGGCATCTGGCACCCAGCTGCTATAACCAAGTGTCCACCAACTACCTGCTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR CAA 90 bp GATGCCTGCATCTCACTGAGGAATGTGTTCAGGGAAGATGTCAACACTGGCCGGTCCTGTTTCAGGCCCTaGAGCTCCTGGGACACGAAA +
Preference number: 5 (lower is better)
Translates to: DACISLRNVFREDVNTGRSCFRP*SSWDTK
Trigger: TTTCGTGTCCCAGGAGCTCAAGGGCCTGAAACAGGA...CCGGCCAGTGTTGACATCTTCCCTGAACACATTCCTCAGTGAGATGCAGGCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR CAA 90 bp GTTCCATGCTCCCGGCTCTTAGCAGGTAGTTGGTGGACACTTGGTTATAGCAGCCCAGCTCTTCGCAGATaGGAGAAGGTTAGCAGGTGC +
Preference number: 5 (lower is better)
Translates to: VPCSRLLAGSWWTLGYSSPALRR*EKVSRC
Trigger: GCACCTGCTAACCTTCTCCAATCTGCGAAGAGCTGG...GCTGCTATAACCAAGTGTCCACCAACTACCTGCTAAGAGCCGGGAGCATGGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR CAA 90 bp TCACTCATGGCCTCCATAAGGCGAGCGCTGTTTGTGACTGCTGTCGTCAGGAAACCAGCTCTTCGCAGATaGGAGAAGGTTAGCAGGTGC +
Preference number: 5 (lower is better)
Translates to: SLMASIRRALFVTAVVRKPALRR*EKVSRC
Trigger: GCACCTGCTAACCTTCTCCAATCTGCGAAGAGCTGG...TTTCCTGACGACAGCAGTCACAAACAGCGCTCGCCTTATGGAGGCCATGAGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574755.5
CDS-3UTR CAA 90 bp TCCCGGCTCTTAGCAGGTAGTTGGTGGACACTTGGTTATAGCAGCTGGGTGCCAGTAGTTGGTGGACACTaGGTTATAGCAGCTGGGTGC +
Preference number: 5 (lower is better)
Translates to: SRLLAGSWWTLGYSSWVPVVGGH*VIAAGC
Trigger: GCACCCAGCTGCTATAACCAAGTGTCCACCAACTAC...TGGCACCCAGCTGCTATAACCAAGTGTCCACCAACTACCTGCTAAGAGCCGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR CAA 90 bp TCCCAACACGTTCCATGCTCCCGGCTCTTAGCAGGTAGTTGGTGGACACTTGGTGTAGTTGGTGGACACTaGGTTATAGCAGCTGGGTGC +
Preference number: 5 (lower is better)
Translates to: SQHVPCSRLLAGSWWTLGVVGGH*VIAAGC
Trigger: GCACCCAGCTGCTATAACCAAGTGTCCACCAACTAC...ACCAAGTGTCCACCAACTACCTGCTAAGAGCCGGGAGCATGGAACGTGTTGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR CAA 90 bp CAGATAATGTTCTCTAAATCCCAACACGTTCCATGCTCCCGGCTCTTAGCAGGTTACCTCGGAGCAGCCTaGTCTCAGACCTGCAGCCAC +
Preference number: 5 (lower is better)
Translates to: QIMFSKSQHVPCSRLLAGYLGAA*SQTCSH
Trigger: GTGGCTGCAGGTCTGAGACAAGGCTGCTCCGAGGTA...ACCTGCTAAGAGCCGGGAGCATGGAACGTGTTGGGATTTAGAGAACATTATCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR CAA 90 bp TCCCAACACGTTCCATGCTCCCGGCTCTTAGCAGGTAGTTGGTGGACACTTGGTGACCAAGAAGCACAATaGTTCATTGGAGCTGAGGGC +
Preference number: 5 (lower is better)
Translates to: SQHVPCSRLLAGSWWTLGDQEAQ*FIGAEG
Trigger: GCCCTCAGCTCCAATGAACAATTGTGCTTCTTGGTC...ACCAAGTGTCCACCAACTACCTGCTAAGAGCCGGGAGCATGGAACGTGTTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333371.8
ENST00000535906.1
CDS-3UTR CAA 90 bp TCCCAACACGTTCCATGCTCCCGGCTCTTAGCAGGTAGTTGGTGGACACTTGGTGGGCTGAAGATCACTTaGTATTTGCGAGTTCGGCCA +
Preference number: 5 (lower is better)
Translates to: SQHVPCSRLLAGSWWTLGGLKIT*YLRVRP
Trigger: TGGCCGAACTCGCAAATACAAAGTGATCTTCAGCCC...ACCAAGTGTCCACCAACTACCTGCTAAGAGCCGGGAGCATGGAACGTGTTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR CAA 90 bp GATGCCTGCATCTCACTGAGGAATGTGTTCAGGGAAGATGTCAACACTGGCCGGGCCCTCATAAACCACTaGGGAGCAAAGTGCTGTCAC +
Preference number: 5 (lower is better)
Translates to: DACISLRNVFREDVNTGRALINH*GAKCCH
Trigger: GTGACAGCACTTTGCTCCCAAGTGGTTTATGAGGGC...CCGGCCAGTGTTGACATCTTCCCTGAACACATTCCTCAGTGAGATGCAGGCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR CAA 90 bp TTAGCAGGTAGTTGGTGGACACTTGGTTATAGCAGCTGGGTGCCAGATGCCTGCGCCCTCATAAACCACTaGGGAGCAAAGTGCTGTCAC +
Preference number: 5 (lower is better)
Translates to: LAGSWWTLGYSSWVPDACALINH*GAKCCH
Trigger: GTGACAGCACTTTGCTCCCAAGTGGTTTATGAGGGC...GCAGGCATCTGGCACCCAGCTGCTATAACCAAGTGTCCACCAACTACCTGCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR CAA 90 bp AGCACCTTCAGGCTCTTGTCAGAGGATGTGACTTCTGGGCCAAAGTCGACACTCGCCCTCATAAACCACTaGGGAGCAAAGTGCTGTCAC +
Preference number: 5 (lower is better)
Translates to: STFRLLSEDVTSGPKSTLALINH*GAKCCH
Trigger: GTGACAGCACTTTGCTCCCAAGTGGTTTATGAGGGC...GAGTGTCGACTTTGGCCCAGAAGTCACATCCTCTGACAAGAGCCTGAAGGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574755.5
CDS-3UTR CAA 90 bp CAGGCTCTTGTCAGAGGATGTGACTTCTGGGCCAAAGTCGACACTCCCACACTTTCGACACTCCCACACTaGATGCGGAAGGTGTCATCT +
Preference number: 5 (lower is better)
Translates to: QALVRGCDFWAKVDTPTLSTLPH*MRKVSS
Trigger: AGATGACACCTTCCGCATCAAGTGTGGGAGTGTCGA...AAGTGTGGGAGTGTCGACTTTGGCCCAGAAGTCACATCCTCTGACAAGAGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574755.5
CDS-3UTR CAA 90 bp TCCCGGCTCTTAGCAGGTAGTTGGTGGACACTTGGTTATAGCAGCTGGGTGCCAAGCACCTTCAGGCTCTaGTCAGAGGATGTGACTTCT +
Preference number: 5 (lower is better)
Translates to: SRLLAGSWWTLGYSSWVPSTFRL*SEDVTS
Trigger: AGAAGTCACATCCTCTGACAAGAGCCTGAAGGTGCT...TGGCACCCAGCTGCTATAACCAAGTGTCCACCAACTACCTGCTAAGAGCCGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR CAA 90 bp TCCCAACACGTTCCATGCTCCCGGCTCTTAGCAGGTAGTTGGTGGACACTTGGTAGCACCTTCAGGCTCTaGTCAGAGGATGTGACTTCT +
Preference number: 5 (lower is better)
Translates to: SQHVPCSRLLAGSWWTLGSTFRL*SEDVTS
Trigger: AGAAGTCACATCCTCTGACAAGAGCCTGAAGGTGCT...ACCAAGTGTCCACCAACTACCTGCTAAGAGCCGGGAGCATGGAACGTGTTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR CAA 90 bp TCCTCCAGGTTCCTCCACAATTCATATGCCATCTTGGCGCACCTGCCAATTCCATCCTGTTTCAGGCCCTaGAGCTCCTGGGACACGAAA +
Preference number: 5 (lower is better)
Translates to: SSRFLHNSYAILAHLPIPSCFRP*SSWDTK
Trigger: TTTCGTGTCCCAGGAGCTCAAGGGCCTGAAACAGGA...TGGAATTGGCAGGTGCGCCAAGATGGCATATGAATTGTGGAGGAACCTGGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574755.5
CDS-3UTR CAA 90 bp GCAGGTAGTTGGTGGACACTTGGTTATAGCAGCTGGGTGCCAGATGCCTGCATCCGAAAATTGCTCCTCTaGGCCAGAGAACTGAAGGCA +
Preference number: 5 (lower is better)
Translates to: AGSWWTLGYSSWVPDACIRKLLL*ARELKA
Trigger: TGCCTTCAGTTCTCTGGCCAAGAGGAGCAATTTTCG...GATGCAGGCATCTGGCACCCAGCTGCTATAACCAAGTGTCCACCAACTACCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR CAA 90 bp GTTCCGGGCCTTCTGGCTCAAGAAGCCAAAGACATTGGAGAAGTGCTCGTTCCGCGAAAATTGCTCCTCTaGGCCAGAGAACTGAAGGCA +
Preference number: 5 (lower is better)
Translates to: VPGLLAQEAKDIGEVLVPRKLLL*ARELKA
Trigger: TGCCTTCAGTTCTCTGGCCAAGAGGAGCAATTTTCG...CGGAACGAGCACTTCTCCAATGTCTTTGGCTTCTTGAGCCAGAAGGCCCGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574755.5
CDS-3UTR CAA 90 bp GGTAGTTGGTGGACACTTGGTTATAGCAGCTGGGTGCCAGATGCCTGCATCTCAAAGCACAATTGTTCATaGGAGCTGAGGGCTGGCTTG +
Preference number: 5 (lower is better)
Translates to: GSWWTLGYSSWVPDACISKHNCS*ELRAGL
Trigger: CAAGCCAGCCCTCAGCTCCAATGAACAATTGTGCTT...TGAGATGCAGGCATCTGGCACCCAGCTGCTATAACCAAGTGTCCACCAACTACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333371.8
ENST00000535906.1
CDS-3UTR CAA 90 bp GTTCCATGCTCCCGGCTCTTAGCAGGTAGTTGGTGGACACTTGGTTATAGCAGCAAGCACAATTGTTCATaGGAGCTGAGGGCTGGCTTG +
Preference number: 5 (lower is better)
Translates to: VPCSRLLAGSWWTLGYSSKHNCS*ELRAGL
Trigger: CAAGCCAGCCCTCAGCTCCAATGAACAATTGTGCTT...GCTGCTATAACCAAGTGTCCACCAACTACCTGCTAAGAGCCGGGAGCATGGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333371.8
ENST00000535906.1
CDS-3UTR CAA 90 bp GATGCCTGCATCTCACTGAGGAATGTGTTCAGGGAAGATGTCAACACTGGCCGGGACCAAGAAGCACAATaGTTCATTGGAGCTGAGGGC +
Preference number: 5 (lower is better)
Translates to: DACISLRNVFREDVNTGRDQEAQ*FIGAEG
Trigger: GCCCTCAGCTCCAATGAACAATTGTGCTTCTTGGTC...CCGGCCAGTGTTGACATCTTCCCTGAACACATTCCTCAGTGAGATGCAGGCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333371.8
ENST00000535906.1
CDS-3UTR CAA 90 bp TCCCGGCTCTTAGCAGGTAGTTGGTGGACACTTGGTTATAGCAGCTGGGTGCCAATGTATCGCATATTCTaGATGCGGGGTCTGACCAAG +
Preference number: 5 (lower is better)
Translates to: SRLLAGSWWTLGYSSWVPMYRIF*MRGLTK
Trigger: CTTGGTCAGACCCCGCATCAAGAATATGCGATACAT...TGGCACCCAGCTGCTATAACCAAGTGTCCACCAACTACCTGCTAAGAGCCGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR CAA 90 bp GCAGGTAGTTGGTGGACACTTGGTTATAGCAGCTGGGTGCCAGATGCCTGCATCATGTATCGCATATTCTaGATGCGGGGTCTGACCAAG +
Preference number: 5 (lower is better)
Translates to: AGSWWTLGYSSWVPDACIMYRIF*MRGLTK
Trigger: CTTGGTCAGACCCCGCATCAAGAATATGCGATACAT...GATGCAGGCATCTGGCACCCAGCTGCTATAACCAAGTGTCCACCAACTACCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR CAA 90 bp GGTAGTTGGTGGACACTTGGTTATAGCAGCTGGGTGCCAGATGCCTGCATCTCAGTTCGGCCAGCCAATTaGTCAGCATTGACAAGACTG +
Preference number: 5 (lower is better)
Translates to: GSWWTLGYSSWVPDACISVRPAN*SALTRL
Trigger: CAGTCTTGTCAATGCTGACAAATTGGCTGGCCGAAC...TGAGATGCAGGCATCTGGCACCCAGCTGCTATAACCAAGTGTCCACCAACTACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR CAA 90 bp GCAGGTAGTTGGTGGACACTTGGTTATAGCAGCTGGGTGCCAGATGCCTGCATCAATTCATATGCCATCTaGGCGCACCTGCCAATTCCA +
Preference number: 5 (lower is better)
Translates to: AGSWWTLGYSSWVPDACINSYAI*AHLPIP
Trigger: TGGAATTGGCAGGTGCGCCAAGATGGCATATGAATT...GATGCAGGCATCTGGCACCCAGCTGCTATAACCAAGTGTCCACCAACTACCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR CAA 90 bp CAGGTAGTTGGTGGACACTTGGTTATAGCAGCTGGGTGCCAGATGCCTGCATCTCGAAAATTGCTCCTCTaGGCCAGAGAACTGAAGGCA +
Preference number: 5 (lower is better)
Translates to: QVVGGHLVIAAGCQMPASRKLLL*ARELKA
Trigger: TGCCTTCAGTTCTCTGGCCAAGAGGAGCAATTTTCG...AGATGCAGGCATCTGGCACCCAGCTGCTATAACCAAGTGTCCACCAACTACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR CAA 90 bp TTAGCAGGTAGTTGGTGGACACTTGGTTATAGCAGCTGGGTGCCAGATGCCTGCCTGATGGCACGAAAATaGCTCCTCTTGGCCAGAGAA +
Preference number: 5 (lower is better)
Translates to: LAGSWWTLGYSSWVPDACLMARK*LLLARE
Trigger: TTCTCTGGCCAAGAGGAGCAATTTTCGTGCCATCAG...GCAGGCATCTGGCACCCAGCTGCTATAACCAAGTGTCCACCAACTACCTGCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR CAA 90 bp GCAGGTAGTTGGTGGACACTTGGTTATAGCAGCTGGGTGCCAGATGCCTGCATCCTTGTCTACTTCGTGTaGCTGCTCCAGCAGATAGAT +
Preference number: 5 (lower is better)
Translates to: AGSWWTLGYSSWVPDACILVYFV*LLQQID
Trigger: ATCTATCTGCTGGAGCAGCAACACGAAGTAGACAAG...GATGCAGGCATCTGGCACCCAGCTGCTATAACCAAGTGTCCACCAACTACCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535906.1
CDS TCA 90 bp CGTCCATCTTGCCAAGATGCAGAGGACCATAGCACTTACCACACTTaGTGCGGAAGGTGTCATCTACTAGGCCCTCATAAACCACTTGGG +
Preference number: 5 (lower is better)
Translates to: RPSCQDAEDHSTYHT*CGRCHLLGPHKPLG
Trigger: CCCAAGTGGTTTATGAGGGCCTAGTAGATGACACCTTCCGCATCAAGTGTGGTAAGTGCTATGGTCCTCTGCATCTTGGCAAGATGGACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556096.6
CDS GCA 90 bp TTTCACCTCACTCATGGCCTCCATAAGGCGAGCGCTGTTTGTGACTaGTGTCGTCAGGAAAATGAACCTGTAGCCTGCTCAATGATTCGG +
Preference number: 5 (lower is better)
Translates to: FHLTHGLHKASAVCD*CRQENEPVACSMIR
Trigger: CCGAATCATTGAGCAGGCTACAGGTTCATTTTCCTGACGACAGCAGTCACAAACAGCGCTCGCCTTATGGAGGCCATGAGTGAGGTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557470.5
CDS-3UTR CAA 90 bp AACACTGGCCGGGAAAAACATCAGGCTTTCACCTCACTCATGGCCTCCATAAGGGTTCGGCCAGCCAATTaGTCAGCATTGACAAGACTG +
Preference number: 5 (lower is better)
Translates to: NTGREKHQAFTSLMASIRVRPAN*SALTRL
Trigger: CAGTCTTGTCAATGCTGACAAATTGGCTGGCCGAAC...CCTTATGGAGGCCATGAGTGAGGTGAAAGCCTGATGTTTTTCCCGGCCAGTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574755.5
CDS-3UTR CAA 90 bp TCCCGGCTCTTAGCAGGTAGTTGGTGGACACTTGGTTATAGCAGCTGGGTGCCACAATTCCATAGCAGTTaGGAAAGGGTCCATAGAGAG +
Preference number: 5 (lower is better)
Translates to: SRLLAGSWWTLGYSSWVPQFHSS*ERVHRE
Trigger: CTCTCTATGGACCCTTTCCAAACTGCTATGGAATTG...TGGCACCCAGCTGCTATAACCAAGTGTCCACCAACTACCTGCTAAGAGCCGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR CAA 90 bp CAGGTAGTTGGTGGACACTTGGTTATAGCAGCTGGGTGCCAGATGCCTGCATCTAATTCATATGCCATCTaGGCGCACCTGCCAATTCCA +
Preference number: 5 (lower is better)
Translates to: QVVGGHLVIAAGCQMPASNSYAI*AHLPIP
Trigger: TGGAATTGGCAGGTGCGCCAAGATGGCATATGAATT...AGATGCAGGCATCTGGCACCCAGCTGCTATAACCAAGTGTCCACCAACTACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR CAA 90 bp GTTCCATGCTCCCGGCTCTTAGCAGGTAGTTGGTGGACACTTGGTTATAGCAGCAAGAAGCCAAAGACATaGGAGAAGTGCTCGTTCCGA +
Preference number: 5 (lower is better)
Translates to: VPCSRLLAGSWWTLGYSSKKPKT*EKCSFR
Trigger: TCGGAACGAGCACTTCTCCAATGTCTTTGGCTTCTT...GCTGCTATAACCAAGTGTCCACCAACTACCTGCTAAGAGCCGGGAGCATGGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR CAA 90 bp TTAGCAGGTAGTTGGTGGACACTTGGTTATAGCAGCTGGGTGCCAGATGCCTGCAAGAAGCCAAAGACATaGGAGAAGTGCTCGTTCCGA +
Preference number: 5 (lower is better)
Translates to: LAGSWWTLGYSSWVPDACKKPKT*EKCSFR
Trigger: TCGGAACGAGCACTTCTCCAATGTCTTTGGCTTCTT...GCAGGCATCTGGCACCCAGCTGCTATAACCAAGTGTCCACCAACTACCTGCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR CAA 90 bp AGCTGGGTGCCAGATGCCTGCATCTCACTGAGGAATGTGTTCAGGGAAGATGTCAGTGCATGCTCAGTCTaGATTAGCTCCTGGAAATCC +
Preference number: 5 (lower is better)
Translates to: SWVPDACISLRNVFREDVSACSV*ISSWKS
Trigger: GGATTTCCAGGAGCTAATCAAGACTGAGCATGCACT...GACATCTTCCCTGAACACATTCCTCAGTGAGATGCAGGCATCTGGCACCCAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR CAA 90 bp CAGGTAGTTGGTGGACACTTGGTTATAGCAGCTGGGTGCCAGATGCCTGCATCTAGTGCATGCTCAGTCTaGATTAGCTCCTGGAAATCC +
Preference number: 5 (lower is better)
Translates to: QVVGGHLVIAAGCQMPASSACSV*ISSWKS
Trigger: GGATTTCCAGGAGCTAATCAAGACTGAGCATGCACT...AGATGCAGGCATCTGGCACCCAGCTGCTATAACCAAGTGTCCACCAACTACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR CAA 90 bp CAGATAATGTTCTCTAAATCCCAACACGTTCCATGCTCCCGGCTCTTAGCAGGTGCAAAGTCACTGCAGTaGAGCAGCCGTACCACCTCA +
Preference number: 5 (lower is better)
Translates to: QIMFSKSQHVPCSRLLAGAKSLQ*SSRTTS
Trigger: TGAGGTGGTACGGCTGCTCAACTGCAGTGACTTTGC...ACCTGCTAAGAGCCGGGAGCATGGAACGTGTTGGGATTTAGAGAACATTATCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR CAA 90 bp TTAGCAGGTAGTTGGTGGACACTTGGTTATAGCAGCTGGGTGCCAGATGCCTGCTCCACCTTGTATAGCTaGTCTACTTCGTGTTGCTGC +
Preference number: 5 (lower is better)
Translates to: LAGSWWTLGYSSWVPDACSTLYS*STSCCC
Trigger: GCAGCAACACGAAGTAGACAAGCTATACAAGGTGGA...GCAGGCATCTGGCACCCAGCTGCTATAACCAAGTGTCCACCAACTACCTGCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535906.1
CDS TCA 90 bp AAGTCCACATCTGAAACAGAGATCCCTGACCATGAAGGTTCTCCCTaGCCCAGCCTTCTACACAGCATGTCCAAGGGCAGCTTTGATACT +
Preference number: 5 (lower is better)
Translates to: KSTSETEIPDHEGSP*PSLLHSMSKGSFDT
Trigger: AGTATCAAAGCTGCCCTTGGACATGCTGTGTAGAAGGCTGGGTCAGGGAGAACCTTCATGGTCAGGGATCTCTGTTTCAGATGTGGACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556096.6
CDS-3UTR CAA 90 bp TTAGCAGGTAGTTGGTGGACACTTGGTTATAGCAGCTGGGTGCCAGATGCCTGCTCCACCTTGTATAGCTaGTCTACTTCGTGTTGCTTC +
Preference number: 5 (lower is better)
Translates to: LAGSWWTLGYSSWVPDACSTLYS*STSCCF
Trigger: GAAGCAACACGAAGTAGACAAGCTATACAAGGTGGA...GCAGGCATCTGGCACCCAGCTGCTATAACCAAGTGTCCACCAACTACCTGCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333371.8
CDS-3UTR CAA 90 bp TTCTCTAAATCCCAACACGTTCCATGCTCCCGGCTCTTAGCAGGTAGTTGGTGGGGCTTGTTCTCCACCTaGTATAGCTTGTCTACTTCG +
Preference number: 5 (lower is better)
Translates to: FSKSQHVPCSRLLAGSWWGLFST*YSLSTS
Trigger: CGAAGTAGACAAGCTATACAAGGTGGAGAACAAGCC...CCACCAACTACCTGCTAAGAGCCGGGAGCATGGAACGTGTTGGGATTTAGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333371.8
ENST00000535906.1
CDS-3UTR CAA 90 bp TCCCAACACGTTCCATGCTCCCGGCTCTTAGCAGGTAGTTGGTGGACACTTGGTGCCAATTTGTCAGCATaGACAAGACTGGCAATGTAT +
Preference number: 5 (lower is better)
Translates to: SQHVPCSRLLAGSWWTLGANLSA*TRLAMY
Trigger: ATACATTGCCAGTCTTGTCAATGCTGACAAATTGGC...ACCAAGTGTCCACCAACTACCTGCTAAGAGCCGGGAGCATGGAACGTGTTGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR CAA 90 bp AGCTGGGTGCCAGATGCCTGCATCTCACTGAGGAATGTGTTCAGGGAAGATGTCAAGATCACTTTGTATTaGCGAGTTCGGCCAGCCAAT +
Preference number: 5 (lower is better)
Translates to: SWVPDACISLRNVFREDVKITLY*RVRPAN
Trigger: ATTGGCTGGCCGAACTCGCAAATACAAAGTGATCTT...GACATCTTCCCTGAACACATTCCTCAGTGAGATGCAGGCATCTGGCACCCAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR CAA 90 bp GTGCCAGATGCCTGCATCTCACTGAGGAATGTGTTCAGGGAAGATGTCAACACTGGGCTGAAGATCACTTaGTATTTGCGAGTTCGGCCA +
Preference number: 5 (lower is better)
Translates to: VPDACISLRNVFREDVNTGLKIT*YLRVRP
Trigger: TGGCCGAACTCGCAAATACAAAGTGATCTTCAGCCC...AGTGTTGACATCTTCCCTGAACACATTCCTCAGTGAGATGCAGGCATCTGGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR CAA 90 bp TCCCAACACGTTCCATGCTCCCGGCTCTTAGCAGGTAGTTGGTGGACACTTGGTACACGCATAGAACTTTaGAGGGCTGAAGATCACTTT +
Preference number: 5 (lower is better)
Translates to: SQHVPCSRLLAGSWWTLGTRIEL*RAEDHF
Trigger: AAAGTGATCTTCAGCCCTCAAAAGTTCTATGCGTGT...ACCAAGTGTCCACCAACTACCTGCTAAGAGCCGGGAGCATGGAACGTGTTGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR CAA 90 bp TTAGCAGGTAGTTGGTGGACACTTGGTTATAGCAGCTGGGTGCCAGATGCCTGCCAATTCCATAGCAGTTaGGAAAGGGTCCATAGAGAG +
Preference number: 5 (lower is better)
Translates to: LAGSWWTLGYSSWVPDACQFHSS*ERVHRE
Trigger: CTCTCTATGGACCCTTTCCAAACTGCTATGGAATTG...GCAGGCATCTGGCACCCAGCTGCTATAACCAAGTGTCCACCAACTACCTGCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR CAA 90 bp GGCGCACCTGCCAATTCCATAGCAGTTTGGAAAGGGTCCATAGAGAGTGCTGAGCAATTCCATAGCAGTTaGGAAAGGGTCCATAGAGAG +
Preference number: 5 (lower is better)
Translates to: GAPANSIAVWKGSIESAEQFHSS*ERVHRE
Trigger: CTCTCTATGGACCCTTTCCAAACTGCTATGGAATTG...CTCAGCACTCTCTATGGACCCTTTCCAAACTGCTATGGAATTGGCAGGTGCGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574755.5
CDS-3UTR CAA 90 bp TTAGCAGGTAGTTGGTGGACACTTGGTTATAGCAGCTGGGTGCCAGATGCCTGCATCTCATTAAACACCTaGTCCTCGGCATTGAGTAGC +
Preference number: 5 (lower is better)
Translates to: LAGSWWTLGYSSWVPDACISLNT*SSALSS
Trigger: GCTACTCAATGCCGAGGACAAGGTGTTTAATGAGAT...GCAGGCATCTGGCACCCAGCTGCTATAACCAAGTGTCCACCAACTACCTGCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR CAA 90 bp GATGCCTGCATCTCACTGAGGAATGTGTTCAGGGAAGATGTCAACACTGGCCGGATCTCATTAAACACCTaGTCCTCGGCATTGAGTAGC +
Preference number: 5 (lower is better)
Translates to: DACISLRNVFREDVNTGRISLNT*SSALSS
Trigger: GCTACTCAATGCCGAGGACAAGGTGTTTAATGAGAT...CCGGCCAGTGTTGACATCTTCCCTGAACACATTCCTCAGTGAGATGCAGGCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS CCA 90 bp TTCTCCTACCATTCCCTGAACTGCCATAAAGGTCCTCAAACTATTTaGAAGCCAGCAGTTCATTCAGGGTCTGGGTCTCTCCCACAAACC +
Preference number: 5 (lower is better)
Translates to: FSYHSLNCHKGPQTI*KPAVHSGSGSLPQT
Trigger: GGTTTGTGGGAGAGACCCAGACCCTGAATGAACTGCTGGCTTCCAAATAGTTTGAGGACCTTTATGGCAGTTCAGGGAATGGTAGGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556096.6
CDS-3UTR CAA 90 bp TTCTCTAAATCCCAACACGTTCCATGCTCCCGGCTCTTAGCAGGTAGTTGGTGGCTTGTCTACTTCGTGTaGCTTCAGGATGGAGACATT +
Preference number: 5 (lower is better)
Translates to: FSKSQHVPCSRLLAGSWWLVYFV*LQDGDI
Trigger: AATGTCTCCATCCTGAAGCAACACGAAGTAGACAAG...CCACCAACTACCTGCTAAGAGCCGGGAGCATGGAACGTGTTGGGATTTAGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333371.8
CDS-3UTR CAA 90 bp GTGCCAGATGCCTGCATCTCACTGAGGAATGTGTTCAGGGAAGATGTCAACACTGGCTTGTTCTCCACCTaGTATAGCTTGTCTACTTCG +
Preference number: 5 (lower is better)
Translates to: VPDACISLRNVFREDVNTGLFST*YSLSTS
Trigger: CGAAGTAGACAAGCTATACAAGGTGGAGAACAAGCC...AGTGTTGACATCTTCCCTGAACACATTCCTCAGTGAGATGCAGGCATCTGGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333371.8
ENST00000535906.1
CDS-3UTR CAA 90 bp CAGATAATGTTCTCTAAATCCCAACACGTTCCATGCTCCCGGCTCTTAGCAGGTGTTCGGCCAGCCAATTaGTCAGCATTGACAAGACTG +
Preference number: 5 (lower is better)
Translates to: QIMFSKSQHVPCSRLLAGVRPAN*SALTRL
Trigger: CAGTCTTGTCAATGCTGACAAATTGGCTGGCCGAAC...ACCTGCTAAGAGCCGGGAGCATGGAACGTGTTGGGATTTAGAGAACATTATCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR CAA 90 bp GGTAGTTGGTGGACACTTGGTTATAGCAGCTGGGTGCCAGATGCCTGCATCTCAACACGCATAGAACTTTaGAGGGCTGAAGATCACTTT +
Preference number: 5 (lower is better)
Translates to: GSWWTLGYSSWVPDACISTRIEL*RAEDHF
Trigger: AAAGTGATCTTCAGCCCTCAAAAGTTCTATGCGTGT...TGAGATGCAGGCATCTGGCACCCAGCTGCTATAACCAAGTGTCCACCAACTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR CAA 90 bp AGCTGGGTGCCAGATGCCTGCATCTCACTGAGGAATGTGTTCAGGGAAGATGTCTCCTGGAAATCCTGCTaGGTTTTCTTCTTCATGATG +
Preference number: 5 (lower is better)
Translates to: SWVPDACISLRNVFREDVSWKSC*VFFFMM
Trigger: CATCATGAAGAAGAAAACCAAGCAGGATTTCCAGGA...GACATCTTCCCTGAACACATTCCTCAGTGAGATGCAGGCATCTGGCACCCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR CAA 90 bp CAGATAATGTTCTCTAAATCCCAACACGTTCCATGCTCCCGGCTCTTAGCAGGTCTGATGGCACGAAAATaGCTCCTCTTGGCCAGAGAA +
Preference number: 5 (lower is better)
Translates to: QIMFSKSQHVPCSRLLAGLMARK*LLLARE
Trigger: TTCTCTGGCCAAGAGGAGCAATTTTCGTGCCATCAG...ACCTGCTAAGAGCCGGGAGCATGGAACGTGTTGGGATTTAGAGAACATTATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR CAA 90 bp TCCCTCTTCCTCAAGCACCATCTCACACGCATAGAACTTTTGAGGGCTGAAGATCTGATGGCACGAAAATaGCTCCTCTTGGCCAGAGAA +
Preference number: 5 (lower is better)
Translates to: SLFLKHHLTRIELLRAEDLMARK*LLLARE
Trigger: TTCTCTGGCCAAGAGGAGCAATTTTCGTGCCATCAG...ATCTTCAGCCCTCAAAAGTTCTATGCGTGTGAGATGGTGCTTGAGGAAGAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574755.5
CDS-3UTR CAA 90 bp GCATGCTCAGTCTTGATTAGCTCCTGGAAATCCTGCTTGGTTTTCTTCTTCATGGCAAAGTCACTGCAGTaGAGCAGCCGTACCACCTCA +
Preference number: 5 (lower is better)
Translates to: ACSVLISSWKSCLVFFFMAKSLQ*SSRTTS
Trigger: TGAGGTGGTACGGCTGCTCAACTGCAGTGACTTTGC...CATGAAGAAGAAAACCAAGCAGGATTTCCAGGAGCTAATCAAGACTGAGCATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574755.5
CDS-3UTR CAA 90 bp CAGATAATGTTCTCTAAATCCCAACACGTTCCATGCTCCCGGCTCTTAGCAGGTTTCAGGATGGAGACATaGGCAATTCGATCCAAAGGG +
Preference number: 5 (lower is better)
Translates to: QIMFSKSQHVPCSRLLAGFRMET*AIRSKG
Trigger: CCCTTTGGATCGAATTGCCAATGTCTCCATCCTGAA...ACCTGCTAAGAGCCGGGAGCATGGAACGTGTTGGGATTTAGAGAACATTATCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333371.8
ENST00000574755.5
CDS-3UTR CAA 90 bp CAGATAATGTTCTCTAAATCCCAACACGTTCCATGCTCCCGGCTCTTAGCAGGTATGTATCGCATATTCTaGATGCGGGGTCTGACCAAG +
Preference number: 5 (lower is better)
Translates to: QIMFSKSQHVPCSRLLAGMYRIF*MRGLTK
Trigger: CTTGGTCAGACCCCGCATCAAGAATATGCGATACAT...ACCTGCTAAGAGCCGGGAGCATGGAACGTGTTGGGATTTAGAGAACATTATCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR CAA 90 bp TTCTCTAAATCCCAACACGTTCCATGCTCCCGGCTCTTAGCAGGTAGTTGGTGGGCCAATTTGTCAGCATaGACAAGACTGGCAATGTAT +
Preference number: 5 (lower is better)
Translates to: FSKSQHVPCSRLLAGSWWANLSA*TRLAMY
Trigger: ATACATTGCCAGTCTTGTCAATGCTGACAAATTGGC...CCACCAACTACCTGCTAAGAGCCGGGAGCATGGAACGTGTTGGGATTTAGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR CAA 90 bp GTGCCAGATGCCTGCATCTCACTGAGGAATGTGTTCAGGGAAGATGTCAACACTAAGATCACTTTGTATTaGCGAGTTCGGCCAGCCAAT +
Preference number: 5 (lower is better)
Translates to: VPDACISLRNVFREDVNTKITLY*RVRPAN
Trigger: ATTGGCTGGCCGAACTCGCAAATACAAAGTGATCTT...AGTGTTGACATCTTCCCTGAACACATTCCTCAGTGAGATGCAGGCATCTGGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR CAA 90 bp CGAAAATTGCTCCTCTTGGCCAGAGAACTGAAGGCATCAGTAATCTTTCCTGCAGGGCTGAAGATCACTTaGTATTTGCGAGTTCGGCCA +
Preference number: 5 (lower is better)
Translates to: RKLLLLARELKASVIFPAGLKIT*YLRVRP
Trigger: TGGCCGAACTCGCAAATACAAAGTGATCTTCAGCCC...TGCAGGAAAGATTACTGATGCCTTCAGTTCTCTGGCCAAGAGGAGCAATTTTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574755.5
CDS-3UTR CAA 90 bp ATCTCTGTCCAAGAGAAAGATATGTCCAATCTCTGGCCTTCGGCCCTTGGTTTCAGTGCATGCTCAGTCTaGATTAGCTCCTGGAAATCC +
Preference number: 5 (lower is better)
Translates to: ISVQEKDMSNLWPSALGFSACSV*ISSWKS
Trigger: GGATTTCCAGGAGCTAATCAAGACTGAGCATGCACT...GAAACCAAGGGCCGAAGGCCAGAGATTGGACATATCTTTCTCTTGGACAGAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574755.5
CDS-3UTR CAA 90 bp GCAGGTAGTTGGTGGACACTTGGTTATAGCAGCTGGGTGCCAGATGCCTGCATCATCAAATTCAGCTTTTaGCTGATGGCACGAAAATTG +
Preference number: 5 (lower is better)
Translates to: AGSWWTLGYSSWVPDACIIKFSF*LMARKL
Trigger: CAATTTTCGTGCCATCAGCAAAAAGCTGAATTTGAT...GATGCAGGCATCTGGCACCCAGCTGCTATAACCAAGTGTCCACCAACTACCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR CAA 90 bp GATCAAATTCAGCTTTTTGCTGATGGCACGAAAATTGCTCCTCTTGGCCAGAGAGTAGTTGGTGGACACTaGGTTATAGCAGCTGGGTGC +
Preference number: 5 (lower is better)
Translates to: DQIQLFADGTKIAPLGQRVVGGH*VIAAGC
Trigger: GCACCCAGCTGCTATAACCAAGTGTCCACCAACTAC...TCTCTGGCCAAGAGGAGCAATTTTCGTGCCATCAGCAAAAAGCTGAATTTGATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574755.5
CDS TCA 90 bp GGACAGCTATTAGGATCTCCAATGAGGACTTCTCCTACCATTCCCTaGACTGCCATAAAGGTCCTCAAACTATTTGGAAGCCAGCAGTTC +
Preference number: 5 (lower is better)
Translates to: GQLLGSPMRTSPTIP*TAIKVLKLFGSQQF
Trigger: GAACTGCTGGCTTCCAAATAGTTTGAGGACCTTTATGGCAGTTCAGGGAATGGTAGGAGAAGTCCTCATTGGAGATCCTAATAGCTGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556096.6
CDS CCA 90 bp AGTTCCCATGCGCCATTATTGAATAATGTAAAGGGGCTGGAGGGATaGCTTCTCCTTTCCCTACCCTTAAGTGACACAGGATATGGTTGT +
Preference number: 5 (lower is better)
Translates to: SSHAPLLNNVKGLEG*LLLSLPLSDTGYGC
Trigger: ACAACCATATCCTGTGTCACTTAAGGGTAGGGAAAGGAGAAGCCATCCCTCCAGCCCCTTTACATTATTCAATAATGGCGCATGGGAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554660.1
CDS-3UTR CAA 90 bp TTTCAGGCCCTTGAGCTCCTGGGACACGAAATTCTTCATCTGCTTAATGTCCATTTCAGGATGGAGACATaGGCAATTCGATCCAAAGGG +
Preference number: 5 (lower is better)
Translates to: FQALELLGHEILHLLNVHFRMET*AIRSKG
Trigger: CCCTTTGGATCGAATTGCCAATGTCTCCATCCTGAA...ATGGACATTAAGCAGATGAAGAATTTCGTGTCCCAGGAGCTCAAGGGCCTGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574755.5
CDS-3UTR CAA 90 bp ATCTCTGTCCAAGAGAAAGATATGTCCAATCTCTGGCCTTCGGCCCTTGGTTTCAAGATCACTTTGTATTaGCGAGTTCGGCCAGCCAAT +
Preference number: 5 (lower is better)
Translates to: ISVQEKDMSNLWPSALGFKITLY*RVRPAN
Trigger: ATTGGCTGGCCGAACTCGCAAATACAAAGTGATCTT...GAAACCAAGGGCCGAAGGCCAGAGATTGGACATATCTTTCTCTTGGACAGAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574755.5
CDS-3UTR CAA 90 bp TGTCATCTACTAGGCCCTCATAAACCACTTGGGAGCAAAGTGCTGTCACAAAGTAATTCATATGCCATCTaGGCGCACCTGCCAATTCCA +
Preference number: 5 (lower is better)
Translates to: CHLLGPHKPLGSKVLSQSNSYAI*AHLPIP
Trigger: TGGAATTGGCAGGTGCGCCAAGATGGCATATGAATT...ACTTTGTGACAGCACTTTGCTCCCAAGTGGTTTATGAGGGCCTAGTAGATGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574755.5
CDS-3UTR CAA 90 bp TGGGATCAAATTCAGCTTTTTGCTGATGGCACGAAAATTGCTCCTCTTGGCCAGAAGAAGCCAAAGACATaGGAGAAGTGCTCGTTCCGA +
Preference number: 5 (lower is better)
Translates to: WDQIQLFADGTKIAPLGQKKPKT*EKCSFR
Trigger: TCGGAACGAGCACTTCTCCAATGTCTTTGGCTTCTT...CTGGCCAAGAGGAGCAATTTTCGTGCCATCAGCAAAAAGCTGAATTTGATCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574755.5
CDS-3UTR CAA 90 bp TTAGCAGGTAGTTGGTGGACACTTGGTTATAGCAGCTGGGTGCCAGATGCCTGCATCAAATTCAGCTTTTaGCTGATGGCACGAAAATTG +
Preference number: 5 (lower is better)
Translates to: LAGSWWTLGYSSWVPDACIKFSF*LMARKL
Trigger: CAATTTTCGTGCCATCAGCAAAAAGCTGAATTTGAT...GCAGGCATCTGGCACCCAGCTGCTATAACCAAGTGTCCACCAACTACCTGCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR CAA 90 bp CAAACCATTCTCAGTGATGGACAAAAGGCACATGAGGCGCAGGCTTTCTATAGGGCCAATTTGTCAGCATaGACAAGACTGGCAATGTAT +
Preference number: 5 (lower is better)
Translates to: QTILSDGQKAHEAQAFYRANLSA*TRLAMY
Trigger: ATACATTGCCAGTCTTGTCAATGCTGACAAATTGGC...CCTATAGAAAGCCTGCGCCTCATGTGCCTTTTGTCCATCACTGAGAATGGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574755.5
CDS-3UTR CAA 90 bp CAGATAATGTTCTCTAAATCCCAACACGTTCCATGCTCCCGGCTCTTAGCAGGTTCCTGGAAATCCTGCTaGGTTTTCTTCTTCATGATG +
Preference number: 5 (lower is better)
Translates to: QIMFSKSQHVPCSRLLAGSWKSC*VFFFMM
Trigger: CATCATGAAGAAGAAAACCAAGCAGGATTTCCAGGA...ACCTGCTAAGAGCCGGGAGCATGGAACGTGTTGGGATTTAGAGAACATTATCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS-3UTR CAA 90 bp TCCCTCTTCCTCAAGCACCATCTCACACGCATAGAACTTTTGAGGGCTGAAGATTCCTGGAAATCCTGCTaGGTTTTCTTCTTCATGATG +
Preference number: 5 (lower is better)
Translates to: SLFLKHHLTRIELLRAEDSWKSC*VFFFMM
Trigger: CATCATGAAGAAGAAAACCAAGCAGGATTTCCAGGA...ATCTTCAGCCCTCAAAAGTTCTATGCGTGTGAGATGGTGCTTGAGGAAGAGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574755.5
CDS-3UTR CAA 90 bp TTCTCTAAATCCCAACACGTTCCATGCTCCCGGCTCTTAGCAGGTAGTTGGTGGATCAAATTCAGCTTTTaGCTGATGGCACGAAAATTG +
Preference number: 5 (lower is better)
Translates to: FSKSQHVPCSRLLAGSWWIKFSF*LMARKL
Trigger: CAATTTTCGTGCCATCAGCAAAAAGCTGAATTTGAT...CCACCAACTACCTGCTAAGAGCCGGGAGCATGGAACGTGTTGGGATTTAGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000574755.5
CDS GCA 90 bp GCTATTAGGATCTCCAATGAGGACTTCTCCTACCATTCCCTGAACTaGCATAAAGGTCCTCAAACTATTTGGAAGCCAGCAGTTCATTCA +
Preference number: 5 (lower is better)
Translates to: AIRISNEDFSYHSLN*HKGPQTIWKPAVHS
Trigger: TGAATGAACTGCTGGCTTCCAAATAGTTTGAGGACCTTTATGGCAGTTCAGGGAATGGTAGGAGAAGTCCTCATTGGAGATCCTAATAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556096.6
CDS-3UTR CAA 90 bp CGAAAATTGCTCCTCTTGGCCAGAGAACTGAAGGCATCAGTAATCTTTCCTGCAACACGCATAGAACTTTaGAGGGCTGAAGATCACTTT +
Preference number: 5 (lower is better)
Translates to: RKLLLLARELKASVIFPATRIEL*RAEDHF
Trigger: AAAGTGATCTTCAGCCCTCAAAAGTTCTATGCGTGT...TGCAGGAAAGATTACTGATGCCTTCAGTTCTCTGGCCAAGAGGAGCAATTTTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574755.5
CDS TCA 72 bp CACCTGCGCCGCGGGGTGGAAGGACGCCCTTCGTTCTaGGAAGGCCGGCCGCAGCCCAGGGAAGCGCAAGGG +
Preference number: 6 (lower is better)
Translates to: HLRRGVEGRPSF*EGRPQPREAQG
Trigger: CCCTTGCGCTTCCCTGGGCTGCGGCCGGCCTTCTCAGAACGAAGGGCGTCCTTCCACCCCGCGGCGCAGGTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000556096.6
ENST00000557358.1
ENST00000574755.5
CDS CCA 72 bp GGAAAAGCCATGGCAGCGGTCACCTGCGCCGCGGGGTaGAAGGACGCCCTTCGTTCTGAGAAGGCCGGCCGC +
Preference number: 6 (lower is better)
Translates to: GKAMAAVTCAAG*KDALRSEKAGR
Trigger: GCGGCCGGCCTTCTCAGAACGAAGGGCGTCCTTCCACCCCGCGGCGCAGGTGACCGCTGCCATGGCTTTTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000556096.6
ENST00000557358.1
ENST00000574755.5
CDS GCA 72 bp GCCACCGTGTCTCGACCCTCCCTCCCTGATCCACTCTaGCCGTCAGCAGGATTCCGGTCTACACCCCGCAGA +
Preference number: 6 (lower is better)
Translates to: ATVSRPSLPDPL*PSAGFRSTPRR
Trigger: TCTGCGGGGTGTAGACCGGAATCCTGCTGACGGGCAGAGTGGATCAGGGAGGGAGGGTCGAGACACGGTGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000556096.6
ENST00000557358.1
CDS TCA 72 bp CAGACCTGCAGCCACCGTGTCTCGACCCTCCCTCCCTaGTCCACTCTGCCCGTCAGCAGGATTCCGGTCTAC +
Preference number: 6 (lower is better)
Translates to: QTCSHRVSTLPP*STLPVSRIPVY
Trigger: GTAGACCGGAATCCTGCTGACGGGCAGAGTGGATCAGGGAGGGAGGGTCGAGACACGGTGGCTGCAGGTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000556096.6
ENST00000557358.1
CDS CCA 72 bp CAGGGTCTGGGTCTCTCCCACAAACCCTGCCCCACGTaGGAGGTGCCAAGGCTGATGACCCGTCCATCTTGC +
Preference number: 6 (lower is better)
Translates to: QGLGLSHKPCPT*EVPRLMTRPSC
Trigger: GCAAGATGGACGGGTCATCAGCCTTGGCACCTCCCACGTGGGGCAGGGTTTGTGGGAGAGACCCAGACCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556096.6
CDS CCA 72 bp TGGGCCCTCGCTCCTCAGCAGCACTCCAGGAATGAATaGCCACCTCCAGGCAAGAGAGCTACTACCTCGGAG +
Preference number: 6 (lower is better)
Translates to: WALAPQQHSRNE*PPPGKRATTSE
Trigger: CTCCGAGGTAGTAGCTCTCTTGCCTGGAGGTGGCCATTCATTCCTGGAGTGCTGCTGAGGAGCGAGGGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000556096.6
ENST00000557358.1
ENST00000574755.5
CDS CAA 72 bp ACCTCCAGGCAAGAGAGCTACTACCTCGGAGCAGCCTaGTCTCAGACCTGCAGCCACCGTGTCTCGACCCTC +
Preference number: 6 (lower is better)
Translates to: TSRQESYYLGAA*SQTCSHRVSTL
Trigger: GAGGGTCGAGACACGGTGGCTGCAGGTCTGAGACAAGGCTGCTCCGAGGTAGTAGCTCTCTTGCCTGGAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000556096.6
ENST00000557358.1
ENST00000574755.5
CDS CAA 90 bp GTTCTCCCTGACCCAGCCTTCTACACAGCATGTCCAAGGGCAGCTTaGATACTTTCCATAGGGCCAAGGACCCACGCTCCTCAAAGCTGG +
Preference number: 6 (lower is better)
Translates to: VLPDPAFYTACPRAA*ILSIGPRTHAPQSW
Trigger: CCAGCTTTGAGGAGCGTGGGTCCTTGGCCCTATGGAAAGTATCAAAGCTGCCCTTGGACATGCTGTGTAGAAGGCTGGGTCAGGGAGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556096.6
CDS GCA 72 bp ACGTGGGAGGTGCCAAGGCTGATGACCCGTCCATCTTaGCAAGATGCAGAGGACCATAGCACTTACCACACT +
Preference number: 6 (lower is better)
Translates to: TWEVPRLMTRPS*QDAEDHSTYHT
Trigger: AGTGTGGTAAGTGCTATGGTCCTCTGCATCTTGGCAAGATGGACGGGTCATCAGCCTTGGCACCTCCCACGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556096.6
CDS CAA 72 bp GACCCAGCCTTCTACACAGCATGTCCAAGGGCAGCTTaGATACTTTCCATAGGGCCAAGGACCCACGCTCCT +
Preference number: 6 (lower is better)
Translates to: DPAFYTACPRAA*ILSIGPRTHAP
Trigger: AGGAGCGTGGGTCCTTGGCCCTATGGAAAGTATCAAAGCTGCCCTTGGACATGCTGTGTAGAAGGCTGGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556096.6
CDS TCA 72 bp TCTGAAACAGAGATCCCTGACCATGAAGGTTCTCCCTaGCCCAGCCTTCTACACAGCATGTCCAAGGGCAGC +
Preference number: 6 (lower is better)
Translates to: SETEIPDHEGSP*PSLLHSMSKGS
Trigger: GCTGCCCTTGGACATGCTGTGTAGAAGGCTGGGTCAGGGAGAACCTTCATGGTCAGGGATCTCTGTTTCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556096.6
CDS TCA 72 bp TCTGACCAAGAAGCACAATCTGCTCCAGCAGATAGATaGGCTGGTCTCGAGCCAGCCTCTTCAGCATGGAGA +
Preference number: 6 (lower is better)
Translates to: SDQEAQSAPADR*AGLEPASSAWR
Trigger: TCTCCATGCTGAAGAGGCTGGCTCGAGACCAGCTCATCTATCTGCTGGAGCAGATTGTGCTTCTTGGTCAGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557358.1
CDS GCA 72 bp ACTCATGGCCTCCATAAGGCGAGCGCTGTTTGTGACTaGTGTCGTCAGGAAAATGAACCTGTAGCCTGCTCA +
Preference number: 6 (lower is better)
Translates to: THGLHKASAVCD*CRQENEPVACS
Trigger: TGAGCAGGCTACAGGTTCATTTTCCTGACGACAGCAGTCACAAACAGCGCTCGCCTTATGGAGGCCATGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557470.5
CDS CAA 72 bp GAGGATGTGACTTCTGGGCCAAAGTCGACACTCCCTTaGAGAGCAGAGGGACAGCTATTAGGATCTCCAATG +
Preference number: 6 (lower is better)
Translates to: EDVTSGPKSTLP*RAEGQLLGSPM
Trigger: CATTGGAGATCCTAATAGCTGTCCCTCTGCTCTCAAAGGGAGTGTCGACTTTGGCCCAGAAGTCACATCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556096.6
CDS CAA 90 bp GGTCTGACCAAGAAGCACAATTGTTCATTGGAGCTGAGGGCTGGCTaGTTCTCCACCTTGTATAGCTTGTCTACTTCGTGTTGCTGCTCC +
Preference number: 6 (lower is better)
Translates to: GLTKKHNCSLELRAG*FSTLYSLSTSCCCS
Trigger: GGAGCAGCAACACGAAGTAGACAAGCTATACAAGGTGGAGAACAAGCCAGCCCTCAGCTCCAATGAACAATTGTGCTTCTTGGTCAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535906.1
CDS CAA 90 bp CTCTTGTCAGAGGATGTGACTTCTGGGCCAAAGTCGACACTCCCTTaGAGAGCAGAGGGACAGCTATTAGGATCTCCAATGAGGACTTCT +
Preference number: 6 (lower is better)
Translates to: LLSEDVTSGPKSTLP*RAEGQLLGSPMRTS
Trigger: AGAAGTCCTCATTGGAGATCCTAATAGCTGTCCCTCTGCTCTCAAAGGGAGTGTCGACTTTGGCCCAGAAGTCACATCCTCTGACAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556096.6
CDS CAA 90 bp TCATTAAACACCTTGTCCTCGGCATTGAGTAGCACCTTCAGGCTCTaGTCAGAGGATGTGACTTCTGGGCCAAAGTCGACACTCCCTTTG +
Preference number: 6 (lower is better)
Translates to: SLNTLSSALSSTFRL*SEDVTSGPKSTLPL
Trigger: CAAAGGGAGTGTCGACTTTGGCCCAGAAGTCACATCCTCTGACAAGAGCCTGAAGGTGCTACTCAATGCCGAGGACAAGGTGTTTAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556096.6
CDS CAA 90 bp GGTCTGACCAAGAAGCACAATTGTTCATTGGAGCTGAGGGCTGGCTaGTTCTCCACCTTGTATAGCTTGTCTACTTCGTGTTGCTTCAGG +
Preference number: 6 (lower is better)
Translates to: GLTKKHNCSLELRAG*FSTLYSLSTSCCFR
Trigger: CCTGAAGCAACACGAAGTAGACAAGCTATACAAGGTGGAGAACAAGCCAGCCCTCAGCTCCAATGAACAATTGTGCTTCTTGGTCAGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333371.8
ENST00000554264.5
CDS TCA 72 bp TGCCAAGATGCAGAGGACCATAGCACTTACCACACTTaGTGCGGAAGGTGTCATCTACTAGGCCCTCATAAA +
Preference number: 6 (lower is better)
Translates to: CQDAEDHSTYHT*CGRCHLLGPHK
Trigger: TTTATGAGGGCCTAGTAGATGACACCTTCCGCATCAAGTGTGGTAAGTGCTATGGTCCTCTGCATCTTGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556096.6
CDS CAA 90 bp GGTCTGACCAAGAAGCACAATTGTTCATTGGAGCTGAGGGCTGGCTaGTTCTCCACCTTGTATAGCTTGTCTACTTCGTGTTGCTACAGA +
Preference number: 6 (lower is better)
Translates to: GLTKKHNCSLELRAG*FSTLYSLSTSCCYR
Trigger: TCTGTAGCAACACGAAGTAGACAAGCTATACAAGGTGGAGAACAAGCCAGCCCTCAGCTCCAATGAACAATTGTGCTTCTTGGTCAGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556096.6
CDS CAA 90 bp AAGCACAATTGTTCATTGGAGCTGAGGGCTGGCTTGTTCTCCACCTaGTATAGCTTGTCTACTTCGTGTTGCTTCAGGATGGAGACATTG +
Preference number: 6 (lower is better)
Translates to: KHNCSLELRAGLFST*YSLSTSCCFRMETL
Trigger: CAATGTCTCCATCCTGAAGCAACACGAAGTAGACAAGCTATACAAGGTGGAGAACAAGCCAGCCCTCAGCTCCAATGAACAATTGTGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333371.8
ENST00000554264.5
CDS CAA 72 bp GAGCTGAGGGCTGGCTTGTTCTCCACCTTGTATAGCTaGTCTACTTCGTGTTGCTACAGAGAGAATCCAATA +
Preference number: 6 (lower is better)
Translates to: ELRAGLFSTLYS*STSCCYRENPI
Trigger: TATTGGATTCTCTCTGTAGCAACACGAAGTAGACAAGCTATACAAGGTGGAGAACAAGCCAGCCCTCAGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556096.6
CDS CAA 72 bp TCAGCATTGACAAGACTGGCAATGTATCGCATATTCTaGATGCGGGGTCTGACCAAGAAGCACAATCTGCTC +
Preference number: 6 (lower is better)
Translates to: SALTRLAMYRIF*MRGLTKKHNLL
Trigger: GAGCAGATTGTGCTTCTTGGTCAGACCCCGCATCAAGAATATGCGATACATTGCCAGTCTTGTCAATGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557358.1
CDS CAA 90 bp TGTTCATTGGAGCTGAGGGCTGGCTTGTTCTCCACCTTGTATAGCTaGTCTACTTCGTGTTGCTACAGAGAGAATCCAATAAGACAATGG +
Preference number: 6 (lower is better)
Translates to: CSLELRAGLFSTLYS*STSCCYRENPIRQW
Trigger: CCATTGTCTTATTGGATTCTCTCTGTAGCAACACGAAGTAGACAAGCTATACAAGGTGGAGAACAAGCCAGCCCTCAGCTCCAATGAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556096.6
CDS GCA 72 bp ATCTCCAATGAGGACTTCTCCTACCATTCCCTGAACTaGCATAAAGGTCCTCAAACTATTTGGAAGCCAGCA +
Preference number: 6 (lower is better)
Translates to: ISNEDFSYHSLN*HKGPQTIWKPA
Trigger: TGCTGGCTTCCAAATAGTTTGAGGACCTTTATGGCAGTTCAGGGAATGGTAGGAGAAGTCCTCATTGGAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556096.6
CDS CAA 72 bp TCAGCATTGACAAGACTGGCAATGTATCGCATATTCTaGATGCGGGGTCTGACCAAGAAGCACAATCTTCAG +
Preference number: 6 (lower is better)
Translates to: SALTRLAMYRIF*MRGLTKKHNLQ
Trigger: CTGAAGATTGTGCTTCTTGGTCAGACCCCGCATCAAGAATATGCGATACATTGCCAGTCTTGTCAATGCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574755.5
CDS CAA 90 bp AAGCACAATTGTTCATTGGAGCTGAGGGCTGGCTTGTTCTCCACCTaGTATAGCTTGTCTACTTCGTGTTGCTACAGAGAGAATCCAATA +
Preference number: 6 (lower is better)
Translates to: KHNCSLELRAGLFST*YSLSTSCCYRENPI
Trigger: TATTGGATTCTCTCTGTAGCAACACGAAGTAGACAAGCTATACAAGGTGGAGAACAAGCCAGCCCTCAGCTCCAATGAACAATTGTGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556096.6
CDS TCA 72 bp TTAGGATCTCCAATGAGGACTTCTCCTACCATTCCCTaGACTGCCATAAAGGTCCTCAAACTATTTGGAAGC +
Preference number: 6 (lower is better)
Translates to: LGSPMRTSPTIP*TAIKVLKLFGS
Trigger: GCTTCCAAATAGTTTGAGGACCTTTATGGCAGTTCAGGGAATGGTAGGAGAAGTCCTCATTGGAGATCCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556096.6
CDS CAA 72 bp TCAGCATTGACAAGACTGGCAATGTATCGCATATTCTaGATGCGGGGTCTGACCAAGAAGCACAATTGTTCA +
Preference number: 6 (lower is better)
Translates to: SALTRLAMYRIF*MRGLTKKHNCS
Trigger: TGAACAATTGTGCTTCTTGGTCAGACCCCGCATCAAGAATATGCGATACATTGCCAGTCTTGTCAATGCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000554264.5
ENST00000556096.6
CDS CAA 72 bp AAGATCACTTTGTATTTGCGAGTTCGGCCAGCCAATTaGTCAGCATTGACAAGACTGGCAATGTATCGCATA +
Preference number: 6 (lower is better)
Translates to: KITLYLRVRPAN*SALTRLAMYRI
Trigger: TATGCGATACATTGCCAGTCTTGTCAATGCTGACAAATTGGCTGGCCGAACTCGCAAATACAAAGTGATCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333371.8
ENST00000535906.1
ENST00000554264.5
ENST00000556096.6
ENST00000557358.1
ENST00000574755.5