Pregenerated sensors for VPS25 (Homo sapiens)
Ensembl gene IDs: ENSG00000131475Ensembl transcript IDs: ENST00000253794.7, ENST00000589219.1, ENST00000589520.1, ENST00000589577.1, ENST00000590339.5, ENST00000591584.1
Found 65 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | TATCATAAATCGGTGTGGGGCCACACCTCTCACTGCCAGGCCCGTGGGCCTCCTCAGACATATGGGGTGTaGGAAACCCATCCCCAGGTC | + |
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Preference number: 2 (lower is better) Translates to: YHKSVWGHTSHCQARGPPQTYGV*ETHPQV Trigger: GACCTGGGGATGGGTTTCTCACACCCCATATGTCTG...AGGAGGCCCACGGGCCTGGCAGTGAGAGGTGTGGCCCCACACCGATTTATGATA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000253794.7 |
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| CDS-3UTR GCA 90 bp | TATCATAAATCGGTGTGGGGCCACACCTCTCACTGCCAGGCCCGTGGGCCTCCTGGCCACACCTCTCACTaGCAGGCCCGTGGGCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: YHKSVWGHTSHCQARGPPGHTSH*QARGPP Trigger: AGGAGGCCCACGGGCCTGGCAGTGAGAGGTGTGGCC...AGGAGGCCCACGGGCCTGGCAGTGAGAGGTGTGGCCCCACACCGATTTATGATA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000253794.7 |
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| CDS-3UTR GCA 90 bp | GTCTGGTGGAGTCACAGATCCAGTCTTTGGGGGACACTGGGTCTGTCTCCTTTTCACCAGGCGGCCAGCTaGTTCTGCCGAGTGTCCACA | + |
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Preference number: 4 (lower is better) Translates to: VWWSHRSSLWGTLGLSPFHQAAS*FCRVST Trigger: TGTGGACACTCGGCAGAAGCAGCTGGCCGCCTGGTG...AAAAGGAGACAGACCCAGTGTCCCCCAAAGACTGGATCTGTGACTCCACCAGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000253794.7 ENST00000589520.1 |
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| CDS-3UTR GCA 90 bp | TCTGGTGGAGTCACAGATCCAGTCTTTGGGGGACACTGGGTCTGTCTCCTTTTGGCGGCCAGCTGCTTCTaGCGAGTGTCCACATTCGGT | + |
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Preference number: 4 (lower is better) Translates to: SGGVTDPVFGGHWVCLLLAASCF*RVSTFG Trigger: ACCGAATGTGGACACTCGGCAGAAGCAGCTGGCCGC...CAAAAGGAGACAGACCCAGTGTCCCCCAAAGACTGGATCTGTGACTCCACCAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000253794.7 ENST00000589520.1 |
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| CDS-3UTR GCA 90 bp | TCTGGTGGAGTCACAGATCCAGTCTTTGGGGGACACTGGGTCTGTCTCCTTTTGTCCTGCTGTAGGGCCTaGAGAGCCCGCAGTAGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SGGVTDPVFGGHWVCLLLSCCRA*RARSRV Trigger: CACTCTACTGCGGGCTCTGCAGGCCCTACAGCAGGA...CAAAAGGAGACAGACCCAGTGTCCCCCAAAGACTGGATCTGTGACTCCACCAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000253794.7 ENST00000589520.1 |
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| CDS-3UTR CCA 90 bp | GTCTGGTGGAGTCACAGATCCAGTCTTTGGGGGACACTGGGTCTGTCTCCTTTTGAGCCCGCAGTAGAGTaGCTTCATCCAGCCCGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VWWSHRSSLWGTLGLSPFEPAVE*LHPARG Trigger: TCCACGGGCTGGATGAAGCCACTCTACTGCGGGCTC...AAAAGGAGACAGACCCAGTGTCCCCCAAAGACTGGATCTGTGACTCCACCAGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000253794.7 ENST00000589520.1 |
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| CDS-3UTR CCA 90 bp | TATCATAAATCGGTGTGGGGCCACACCTCTCACTGCCAGGCCCGTGGGCCTCCTTATCATAAATCGGTGTaGGGCCACACCTCTCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: YHKSVWGHTSHCQARGPPYHKSV*GHTSHC Trigger: GCAGTGAGAGGTGTGGCCCCACACCGATTTATGATA...AGGAGGCCCACGGGCCTGGCAGTGAGAGGTGTGGCCCCACACCGATTTATGATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000253794.7 |
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| CDS-3UTR TCA 90 bp | TCTGGTGGAGTCACAGATCCAGTCTTTGGGGGACACTGGGTCTGTCTCCTTTTGAAGAGCGGGCTCTCCTaGGCTTCCATCACCGTCATG | + |
|
Preference number: 4 (lower is better) Translates to: SGGVTDPVFGGHWVCLLLKSGLS*ASITVM Trigger: CATGACGGTGATGGAAGCTCAGGAGAGCCCGCTCTT...CAAAAGGAGACAGACCCAGTGTCCCCCAAAGACTGGATCTGTGACTCCACCAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000253794.7 ENST00000589520.1 |
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| CDS-3UTR GCA 90 bp | TATCATAAATCGGTGTGGGGCCACACCTCTCACTGCCAGGCCCGTGGGCCTCCTTCAGGAAGCTGGACTTaGTCTTATCCAACCACTCGA | + |
|
Preference number: 4 (lower is better) Translates to: YHKSVWGHTSHCQARGPPSGSWT*SYPTTR Trigger: TCGAGTGGTTGGATAAGAGCAAGTCCAGCTTCCTGA...AGGAGGCCCACGGGCCTGGCAGTGAGAGGTGTGGCCCCACACCGATTTATGATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000253794.7 |
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| CDS-3UTR GCA 90 bp | TGGTGGAGTCACAGATCCAGTCTTTGGGGGACACTGGGTCTGTCTCCTTTTGAATCCTGCTGTAGGGCCTaGAGAGCCCGCAGTAGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: WWSHRSSLWGTLGLSPFESCCRA*RARSRV Trigger: CACTCTACTGCGGGCTCTGCAGGCCCTACAGCAGGA...TTCAAAAGGAGACAGACCCAGTGTCCCCCAAAGACTGGATCTGTGACTCCACCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000253794.7 ENST00000589520.1 |
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| CDS-3UTR GCA 90 bp | GTCTGGTGGAGTCACAGATCCAGTCTTTGGGGGACACTGGGTCTGTCTCCTTTTATGATCTCGGCCTTGTaGTCCTGCTGTAGGGCCTGC | + |
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Preference number: 4 (lower is better) Translates to: VWWSHRSSLWGTLGLSPFMISAL*SCCRAC Trigger: GCAGGCCCTACAGCAGGAGCACAAGGCCGAGATCAT...AAAAGGAGACAGACCCAGTGTCCCCCAAAGACTGGATCTGTGACTCCACCAGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000253794.7 ENST00000589520.1 |
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| CDS-3UTR CCA 90 bp | TATCATAAATCGGTGTGGGGCCACACCTCTCACTGCCAGGCCCGTGGGCCTCCTGTCTTTGGGGGACACTaGGTCTGTCTCCTTTTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: YHKSVWGHTSHCQARGPPVFGGH*VCLLLK Trigger: TTTCAAAAGGAGACAGACCCAGTGTCCCCCAAAGAC...AGGAGGCCCACGGGCCTGGCAGTGAGAGGTGTGGCCCCACACCGATTTATGATA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000253794.7 |
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| CDS-3UTR TCA 90 bp | TGGTGGAGTCACAGATCCAGTCTTTGGGGGACACTGGGTCTGTCTCCTTTTGAAAAGAGCGGGCTCTCCTaGGCTTCCATCACCGTCATG | + |
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Preference number: 4 (lower is better) Translates to: WWSHRSSLWGTLGLSPFEKSGLS*ASITVM Trigger: CATGACGGTGATGGAAGCTCAGGAGAGCCCGCTCTT...TTCAAAAGGAGACAGACCCAGTGTCCCCCAAAGACTGGATCTGTGACTCCACCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000253794.7 ENST00000589520.1 |
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| CDS-3UTR TCA 90 bp | TCTGGTGGAGTCACAGATCCAGTCTTTGGGGGACACTGGGTCTGTCTCCTTTTGCAGACATATGGGGTGTaGGAAACCCATCCCCAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: SGGVTDPVFGGHWVCLLLQTYGV*ETHPQV Trigger: GACCTGGGGATGGGTTTCTCACACCCCATATGTCTG...CAAAAGGAGACAGACCCAGTGTCCCCCAAAGACTGGATCTGTGACTCCACCAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000253794.7 ENST00000589520.1 |
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| CDS-3UTR GCA 90 bp | TGGTGGAGTCACAGATCCAGTCTTTGGGGGACACTGGGTCTGTCTCCTTTTGAAGGTGGGAAGCGATACTaGCACGGCCACTCGAAACTC | + |
|
Preference number: 4 (lower is better) Translates to: WWSHRSSLWGTLGLSPFEGGKRY*HGHSKL Trigger: GAGTTTCGAGTGGCCGTGGCAGTATCGCTTCCCACC...TTCAAAAGGAGACAGACCCAGTGTCCCCCAAAGACTGGATCTGTGACTCCACCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000253794.7 |
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| CDS-3UTR GCA 90 bp | TCTGGTGGAGTCACAGATCCAGTCTTTGGGGGACACTGGGTCTGTCTCCTTTTGATGCTGGACTGTTTGTaGAGGCGGCAGAAGGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: SGGVTDPVFGGHWVCLLLMLDCL*RRQKDR Trigger: CCTGTCCTTCTGCCGCCTGCACAAACAGTCCAGCAT...CAAAAGGAGACAGACCCAGTGTCCCCCAAAGACTGGATCTGTGACTCCACCAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000253794.7 ENST00000589520.1 |
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| CDS-3UTR GCA 90 bp | TGGTGGAGTCACAGATCCAGTCTTTGGGGGACACTGGGTCTGTCTCCTTTTGAAATGATCTCGGCCTTGTaGTCCTGCTGTAGGGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: WWSHRSSLWGTLGLSPFEMISAL*SCCRAC Trigger: GCAGGCCCTACAGCAGGAGCACAAGGCCGAGATCAT...TTCAAAAGGAGACAGACCCAGTGTCCCCCAAAGACTGGATCTGTGACTCCACCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000253794.7 ENST00000589520.1 |
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| CDS-3UTR CCA 90 bp | TGGTGGAGTCACAGATCCAGTCTTTGGGGGACACTGGGTCTGTCTCCTTTTGAACCATCACCGTCATGCTaGACTGTTTGTGCAGGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: WWSHRSSLWGTLGLSPFEPSPSC*TVCAGG Trigger: GCCGCCTGCACAAACAGTCCAGCATGACGGTGATGG...TTCAAAAGGAGACAGACCCAGTGTCCCCCAAAGACTGGATCTGTGACTCCACCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000253794.7 ENST00000589520.1 |
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| CDS-3UTR CCA 90 bp | TCTGGTGGAGTCACAGATCCAGTCTTTGGGGGACACTGGGTCTGTCTCCTTTTGGCTTCATCCAGCCCGTaGAACTCCTCATCCTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SGGVTDPVFGGHWVCLLLASSSP*NSSSSV Trigger: CACAGAGGATGAGGAGTTCCACGGGCTGGATGAAGC...CAAAAGGAGACAGACCCAGTGTCCCCCAAAGACTGGATCTGTGACTCCACCAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000253794.7 |
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| CDS-3UTR TCA 90 bp | TCTGGTGGAGTCACAGATCCAGTCTTTGGGGGACACTGGGTCTGTCTCCTTTTGGGACTGGAGTCCTTTTaGGTCTGGTGGAGTCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: SGGVTDPVFGGHWVCLLLGLESF*VWWSHR Trigger: TCTGTGACTCCACCAGACTCAAAAGGACTCCAGTCC...CAAAAGGAGACAGACCCAGTGTCCCCCAAAGACTGGATCTGTGACTCCACCAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000253794.7 ENST00000589520.1 |
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| CDS-3UTR GCA 90 bp | TCTGGTGGAGTCACAGATCCAGTCTTTGGGGGACACTGGGTCTGTCTCCTTTTGCTTCCATCACCGTCATaGTGGACTGTTTGTGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SGGVTDPVFGGHWVCLLLLPSPS*WTVCAG Trigger: GCCTGCACAAACAGTCCAGCATGACGGTGATGGAAG...CAAAAGGAGACAGACCCAGTGTCCCCCAAAGACTGGATCTGTGACTCCACCAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000253794.7 ENST00000589520.1 |
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| CDS-3UTR TCA 90 bp | GATTTTAATATCATAAATCGGTGTGGGGCCACACCTCTCACTGCCAGGCCCGTGGGACTGGAGTCCTTTTaGGTCTGGTGGAGTCACAGA | + |
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Preference number: 4 (lower is better) Translates to: DFNIINRCGATPLTARPVGLESF*VWWSHR Trigger: TCTGTGACTCCACCAGACTCAAAAGGACTCCAGTCC...CACGGGCCTGGCAGTGAGAGGTGTGGCCCCACACCGATTTATGATATTAAAATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000253794.7 |
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| CDS-3UTR GCA 90 bp | GATTTTAATATCATAAATCGGTGTGGGGCCACACCTCTCACTGCCAGGCCCGTGCTTCCATCACCGTCATaGTGGACTGTTTGTGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: DFNIINRCGATPLTARPVLPSPS*WTVCAG Trigger: GCCTGCACAAACAGTCCAGCATGACGGTGATGGAAG...CACGGGCCTGGCAGTGAGAGGTGTGGCCCCACACCGATTTATGATATTAAAATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000253794.7 |
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| CDS-3UTR CCA 90 bp | GTCTGGTGGAGTCACAGATCCAGTCTTTGGGGGACACTGGGTCTGTCTCCTTTTGCTTCATCCAGCCCGTaGAACTCTTTCTTCCTCAGT | + |
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Preference number: 4 (lower is better) Translates to: VWWSHRSSLWGTLGLSPFASSSP*NSFFLS Trigger: ACTGAGGAAGAAAGAGTTCCACGGGCTGGATGAAGC...AAAAGGAGACAGACCCAGTGTCCCCCAAAGACTGGATCTGTGACTCCACCAGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000589520.1 |
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| CDS-3UTR TCA 90 bp | GTTGCCTTCCTTCAGCCTTTCTCCACAGATATTTTAGGGATGAATCAGGCAGCAAAGAGCGGGCTCTCCTaGGCTTCCATCACCGTCATG | + |
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Preference number: 4 (lower is better) Translates to: VAFLQPFSTDILGMNQAAKSGLS*ASITVM Trigger: CATGACGGTGATGGAAGCTCAGGAGAGCCCGCTCTT...TGCTGCCTGATTCATCCCTAAAATATCTGTGGAGAAAGGCTGAAGGAAGGCAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589577.1 |
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| CDS-3UTR TCA 90 bp | CTGTCTGTTGCCTTCCTTCAGCCTTTCTCCACAGATATTTTAGGGATGAATCAGGGCTGTGGAAGAGCCTaGGGGAGGATACGCTGTAGC | + |
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Preference number: 4 (lower is better) Translates to: LSVAFLQPFSTDILGMNQGCGRA*GRIRCS Trigger: GCTACAGCGTATCCTCCCTCAGGCTCTTCCACAGCC...CTGATTCATCCCTAAAATATCTGTGGAGAAAGGCTGAAGGAAGGCAACAGACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000589577.1 |
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| CDS-3UTR GCA 90 bp | GTTGCCTTCCTTCAGCCTTTCTCCACAGATATTTTAGGGATGAATCAGGCAGCAGGTGGGAAGCGATACTaGCACGGCCACTCGAAACTC | + |
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Preference number: 4 (lower is better) Translates to: VAFLQPFSTDILGMNQAAGGKRY*HGHSKL Trigger: GAGTTTCGAGTGGCCGTGGCAGTATCGCTTCCCACC...TGCTGCCTGATTCATCCCTAAAATATCTGTGGAGAAAGGCTGAAGGAAGGCAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589577.1 |
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| CDS-3UTR GCA 90 bp | TCTGGTGGAGTCACAGATCCAGTCTTTGGGGGACACTGGGTCTGTCTCCTTTTGATATTTTCTCCCTGGTaGTTCAGCCTCACCCTATCC | + |
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Preference number: 4 (lower is better) Translates to: SGGVTDPVFGGHWVCLLLIFSPW*FSLTLS Trigger: GGATAGGGTGAGGCTGAAGCACCAGGGAGAAAATAT...CAAAAGGAGACAGACCCAGTGTCCCCCAAAGACTGGATCTGTGACTCCACCAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000253794.7 ENST00000589520.1 |
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| CDS-3UTR GCA 90 bp | GTCTGGTGGAGTCACAGATCCAGTCTTTGGGGGACACTGGGTCTGTCTCCTTTTATATTTTCTCCCTGGTaGTTCAGCCTCACCCTATCC | + |
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Preference number: 4 (lower is better) Translates to: VWWSHRSSLWGTLGLSPFIFSPW*FSLTLS Trigger: GGATAGGGTGAGGCTGAAGCACCAGGGAGAAAATAT...AAAAGGAGACAGACCCAGTGTCCCCCAAAGACTGGATCTGTGACTCCACCAGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000253794.7 ENST00000589520.1 |
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| CDS-3UTR GCA 90 bp | TCTGTCTGTTGCCTTCCTTCAGCCTTTCTCCACAGATATTTTAGGGATGAATCAGCGGCCAGCTGCTTCTaGCGAGTGTCCACATTCGGT | + |
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Preference number: 4 (lower is better) Translates to: SVCCLPSAFLHRYFRDESAASCF*RVSTFG Trigger: ACCGAATGTGGACACTCGGCAGAAGCAGCTGGCCGC...TGATTCATCCCTAAAATATCTGTGGAGAAAGGCTGAAGGAAGGCAACAGACAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589577.1 |
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| CDS-3UTR CCA 90 bp | CTGTCTGTTGCCTTCCTTCAGCCTTTCTCCACAGATATTTTAGGGATGAATCAGCCATCACCGTCATGCTaGACTGTTTGTGCAGGCGGC | + |
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Preference number: 4 (lower is better) Translates to: LSVAFLQPFSTDILGMNQPSPSC*TVCAGG Trigger: GCCGCCTGCACAAACAGTCCAGCATGACGGTGATGG...CTGATTCATCCCTAAAATATCTGTGGAGAAAGGCTGAAGGAAGGCAACAGACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589577.1 |
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| CDS-3UTR TCA 90 bp | TCTGTCTGTTGCCTTCCTTCAGCCTTTCTCCACAGATATTTTAGGGATGAATCAGCGTCTGGGCATGTGTaGAAGCGCAGAAGTGCATGT | + |
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Preference number: 4 (lower is better) Translates to: SVCCLPSAFLHRYFRDESASGHV*KRRSAC Trigger: ACATGCACTTCTGCGCTTTCACACATGCCCAGACGC...TGATTCATCCCTAAAATATCTGTGGAGAAAGGCTGAAGGAAGGCAACAGACAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589577.1 |
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| CDS-3UTR GCA 90 bp | TCTGTCTGTTGCCTTCCTTCAGCCTTTCTCCACAGATATTTTAGGGATGAATCAATGCTGGACTGTTTGTaGAGGCGGCAGAAGGACAGG | + |
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Preference number: 4 (lower is better) Translates to: SVCCLPSAFLHRYFRDESMLDCL*RRQKDR Trigger: CCTGTCCTTCTGCCGCCTGCACAAACAGTCCAGCAT...TGATTCATCCCTAAAATATCTGTGGAGAAAGGCTGAAGGAAGGCAACAGACAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589577.1 |
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| CDS-3UTR CCA 90 bp | CTGTCTGTTGCCTTCCTTCAGCCTTTCTCCACAGATATTTTAGGGATGAATCAGCATGTGTATGGGCTGTaGAAGAGCCTGAGGGAGGAT | + |
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Preference number: 4 (lower is better) Translates to: LSVAFLQPFSTDILGMNQHVYGL*KSLRED Trigger: ATCCTCCCTCAGGCTCTTCCACAGCCCATACACATG...CTGATTCATCCCTAAAATATCTGTGGAGAAAGGCTGAAGGAAGGCAACAGACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589577.1 |
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| CDS-3UTR CCA 90 bp | CTGTCTGTTGCCTTCCTTCAGCCTTTCTCCACAGATATTTTAGGGATGAATCAGCAAATGACCCTTACATaGGTAAAAGGGGGCTGGCGC | + |
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Preference number: 4 (lower is better) Translates to: LSVAFLQPFSTDILGMNQQMTLT*VKGGWR Trigger: GCGCCAGCCCCCTTTTACCCATGTAAGGGTCATTTG...CTGATTCATCCCTAAAATATCTGTGGAGAAAGGCTGAAGGAAGGCAACAGACAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000589577.1 |
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| CDS-3UTR GCA 90 bp | TCTGTCTGTTGCCTTCCTTCAGCCTTTCTCCACAGATATTTTAGGGATGAATCACTTCCATCACCGTCATaGTGGACTGTTTGTGCAGGC | + |
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Preference number: 4 (lower is better) Translates to: SVCCLPSAFLHRYFRDESLPSPS*WTVCAG Trigger: GCCTGCACAAACAGTCCAGCATGACGGTGATGGAAG...TGATTCATCCCTAAAATATCTGTGGAGAAAGGCTGAAGGAAGGCAACAGACAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589577.1 |
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| CDS-3UTR GCA 90 bp | CTGTCTGTTGCCTTCCTTCAGCCTTTCTCCACAGATATTTTAGGGATGAATCAGGTGAAAGCGCAGAAGTaGATGTGTATGGGCTGTGGA | + |
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Preference number: 4 (lower is better) Translates to: LSVAFLQPFSTDILGMNQVKAQK*MCMGCG Trigger: TCCACAGCCCATACACATGCACTTCTGCGCTTTCAC...CTGATTCATCCCTAAAATATCTGTGGAGAAAGGCTGAAGGAAGGCAACAGACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589577.1 |
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| CDS-3UTR GCA 90 bp | CTGTCTGTTGCCTTCCTTCAGCCTTTCTCCACAGATATTTTAGGGATGAATCAGTCAGGAAGCTGGACTTaGTCTTATCCAACCACTCGA | + |
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Preference number: 4 (lower is better) Translates to: LSVAFLQPFSTDILGMNQSGSWT*SYPTTR Trigger: TCGAGTGGTTGGATAAGAGCAAGTCCAGCTTCCTGA...CTGATTCATCCCTAAAATATCTGTGGAGAAAGGCTGAAGGAAGGCAACAGACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589577.1 |
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| CDS-3UTR CCA 90 bp | TCTGTCTGTTGCCTTCCTTCAGCCTTTCTCCACAGATATTTTAGGGATGAATCAAGAAGTGCATGTGTATaGGCTGTGGAAGAGCCTGAG | + |
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Preference number: 4 (lower is better) Translates to: SVCCLPSAFLHRYFRDESRSACV*AVEEPE Trigger: CTCAGGCTCTTCCACAGCCCATACACATGCACTTCT...TGATTCATCCCTAAAATATCTGTGGAGAAAGGCTGAAGGAAGGCAACAGACAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589577.1 |
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| CDS GCA 90 bp | TGCAGGCGGCAGAAGGACAGGACCAGCGAGCACCAGGCGGCCAGCTaGTTCTGCCGAGTGTCCACATTCGGTTGTAACCTGCCGGGTGAA | + |
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Preference number: 5 (lower is better) Translates to: CRRQKDRTSEHQAAS*FCRVSTFGCNLPGE Trigger: TTCACCCGGCAGGTTACAACCGAATGTGGACACTCGGCAGAAGCAGCTGGCCGCCTGGTGCTCGCTGGTCCTGTCCTTCTGCCGCCTGCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590339.5 |
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| CDS GCA 90 bp | TGCAGGCGGCAGAAGGACAGGACCAGCGAGCACCAGGCGGCCAGCTaGTTCTGCCGAGTGTCCACATTCGGTTGTAACGTAAAGAAGGGT | + |
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Preference number: 5 (lower is better) Translates to: CRRQKDRTSEHQAAS*FCRVSTFGCNVKKG Trigger: ACCCTTCTTTACGTTACAACCGAATGTGGACACTCGGCAGAAGCAGCTGGCCGCCTGGTGCTCGCTGGTCCTGTCCTTCTGCCGCCTGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000253794.7 ENST00000589219.1 ENST00000589520.1 ENST00000589577.1 ENST00000591584.1 |
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| CDS TCA 90 bp | GGGAGGATACGCTGTAGCTTGACGTTGTTGAAGAGCGGGCTCTCCTaGGCTTCCATCACCGTCATGCTGGACTGTTTGTGCAGGCGGCAG | + |
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Preference number: 5 (lower is better) Translates to: GRIRCSLTLLKSGLS*ASITVMLDCLCRRQ Trigger: CTGCCGCCTGCACAAACAGTCCAGCATGACGGTGATGGAAGCTCAGGAGAGCCCGCTCTTCAACAACGTCAAGCTACAGCGTATCCTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000589577.1 ENST00000591584.1 |
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| CDS TCA 90 bp | GGAAGCTTTCGCTGTAGCTTGACGTTGTTGAAGAGCGGGCTCTCCTaGGCTTCCATCACCGTCATGCTGGACTGTTTGTGCAGGCGGCAG | + |
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Preference number: 5 (lower is better) Translates to: GSFRCSLTLLKSGLS*ASITVMLDCLCRRQ Trigger: CTGCCGCCTGCACAAACAGTCCAGCATGACGGTGATGGAAGCTCAGGAGAGCCCGCTCTTCAACAACGTCAAGCTACAGCGAAAGCTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000253794.7 ENST00000589219.1 ENST00000589520.1 ENST00000590339.5 |
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| CDS-3UTR CAA 90 bp | GTCTGGTGGAGTCACAGATCCAGTCTTTGGGGGACACTGGGTCTGTCTCCTTTTGTCATGCTGGACTGTTaGTGCAGGCGGCAGAAGGAC | + |
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Preference number: 5 (lower is better) Translates to: VWWSHRSSLWGTLGLSPFVMLDC*CRRQKD Trigger: GTCCTTCTGCCGCCTGCACAAACAGTCCAGCATGAC...AAAAGGAGACAGACCCAGTGTCCCCCAAAGACTGGATCTGTGACTCCACCAGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000253794.7 ENST00000589520.1 |
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| CDS-3UTR CAA 90 bp | TCTGGTGGAGTCACAGATCCAGTCTTTGGGGGACACTGGGTCTGTCTCCTTTTGCGCTGTAGCTTGACGTaGTTGAAGAGCGGGCTCTCC | + |
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Preference number: 5 (lower is better) Translates to: SGGVTDPVFGGHWVCLLLRCSLT*LKSGLS Trigger: GGAGAGCCCGCTCTTCAACAACGTCAAGCTACAGCG...CAAAAGGAGACAGACCCAGTGTCCCCCAAAGACTGGATCTGTGACTCCACCAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000253794.7 ENST00000589520.1 |
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| CDS TCA 90 bp | TGTGTGAAAGCGCAGAAGTGCATGTGTATGGGCTGTGGAAGAGCCTaGGGGAGGATACGCTGTAGCTTGACGTTGTTGAAGAGCGGGCTC | + |
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Preference number: 5 (lower is better) Translates to: CVKAQKCMCMGCGRA*GRIRCSLTLLKSGL Trigger: GAGCCCGCTCTTCAACAACGTCAAGCTACAGCGTATCCTCCCTCAGGCTCTTCCACAGCCCATACACATGCACTTCTGCGCTTTCACACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000589577.1 ENST00000591584.1 |
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| CDS-3UTR CAA 90 bp | TGGTGGAGTCACAGATCCAGTCTTTGGGGGACACTGGGTCTGTCTCCTTTTGAAGTCATGCTGGACTGTTaGTGCAGGCGGCAGAAGGAC | + |
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Preference number: 5 (lower is better) Translates to: WWSHRSSLWGTLGLSPFEVMLDC*CRRQKD Trigger: GTCCTTCTGCCGCCTGCACAAACAGTCCAGCATGAC...TTCAAAAGGAGACAGACCCAGTGTCCCCCAAAGACTGGATCTGTGACTCCACCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000253794.7 ENST00000589520.1 |
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| CDS-3UTR CAA 90 bp | GATTTTAATATCATAAATCGGTGTGGGGCCACACCTCTCACTGCCAGGCCCGTGCGCTGTAGCTTGACGTaGTTGAAGAGCGGGCTCTCC | + |
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Preference number: 5 (lower is better) Translates to: DFNIINRCGATPLTARPVRCSLT*LKSGLS Trigger: GGAGAGCCCGCTCTTCAACAACGTCAAGCTACAGCG...CACGGGCCTGGCAGTGAGAGGTGTGGCCCCACACCGATTTATGATATTAAAATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000253794.7 |
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| CDS-3UTR CAA 90 bp | TCTGGTGGAGTCACAGATCCAGTCTTTGGGGGACACTGGGTCTGTCTCCTTTTGTCACAGATCCAGTCTTaGGGGGACACTGGGTCTGTC | + |
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Preference number: 5 (lower is better) Translates to: SGGVTDPVFGGHWVCLLLSQIQS*GDTGSV Trigger: GACAGACCCAGTGTCCCCCAAAGACTGGATCTGTGA...CAAAAGGAGACAGACCCAGTGTCCCCCAAAGACTGGATCTGTGACTCCACCAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000253794.7 ENST00000589520.1 |
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| CDS-3UTR CAA 90 bp | GTCTGGTGGAGTCACAGATCCAGTCTTTGGGGGACACTGGGTCTGTCTCCTTTTTCACAGATCCAGTCTTaGGGGGACACTGGGTCTGTC | + |
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Preference number: 5 (lower is better) Translates to: VWWSHRSSLWGTLGLSPFSQIQS*GDTGSV Trigger: GACAGACCCAGTGTCCCCCAAAGACTGGATCTGTGA...AAAAGGAGACAGACCCAGTGTCCCCCAAAGACTGGATCTGTGACTCCACCAGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENST00000253794.7 ENST00000589520.1 |
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| CDS-3UTR CAA 90 bp | GATTTTAATATCATAAATCGGTGTGGGGCCACACCTCTCACTGCCAGGCCCGTGAGCTTTCGCTGTAGCTaGACGTTGTTGAAGAGCGGG | + |
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Preference number: 5 (lower is better) Translates to: DFNIINRCGATPLTARPVSFRCS*TLLKSG Trigger: CCCGCTCTTCAACAACGTCAAGCTACAGCGAAAGCT...CACGGGCCTGGCAGTGAGAGGTGTGGCCCCACACCGATTTATGATATTAAAATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000253794.7 |
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| CDS-3UTR CAA 90 bp | TGGTGGAGTCACAGATCCAGTCTTTGGGGGACACTGGGTCTGTCTCCTTTTGAAAGCTTTCGCTGTAGCTaGACGTTGTTGAAGAGCGGG | + |
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Preference number: 5 (lower is better) Translates to: WWSHRSSLWGTLGLSPFESFRCS*TLLKSG Trigger: CCCGCTCTTCAACAACGTCAAGCTACAGCGAAAGCT...TTCAAAAGGAGACAGACCCAGTGTCCCCCAAAGACTGGATCTGTGACTCCACCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000253794.7 ENST00000589520.1 |
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| CDS-3UTR CAA 90 bp | TCTGTCTGTTGCCTTCCTTCAGCCTTTCTCCACAGATATTTTAGGGATGAATCAGTCATGCTGGACTGTTaGTGCAGGCGGCAGAAGGAC | + |
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Preference number: 5 (lower is better) Translates to: SVCCLPSAFLHRYFRDESVMLDC*CRRQKD Trigger: GTCCTTCTGCCGCCTGCACAAACAGTCCAGCATGAC...TGATTCATCCCTAAAATATCTGTGGAGAAAGGCTGAAGGAAGGCAACAGACAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589577.1 |
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| CDS-3UTR CAA 90 bp | GTTGCCTTCCTTCAGCCTTTCTCCACAGATATTTTAGGGATGAATCAGGCAGCAAGGATACGCTGTAGCTaGACGTTGTTGAAGAGCGGG | + |
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Preference number: 5 (lower is better) Translates to: VAFLQPFSTDILGMNQAARIRCS*TLLKSG Trigger: CCCGCTCTTCAACAACGTCAAGCTACAGCGTATCCT...TGCTGCCTGATTCATCCCTAAAATATCTGTGGAGAAAGGCTGAAGGAAGGCAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589577.1 |
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| CDS CCA 90 bp | GGCACAGACAGAGATTTCAATTTTGTGTACAAAGAAGAAAGGACTTaGGAATTGGGCTGCCTACTTTACAGAAGACTCTGGCCTTCAAGC | + |
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Preference number: 5 (lower is better) Translates to: GTDRDFNFVYKEERT*ELGCLLYRRLWPSS Trigger: GCTTGAAGGCCAGAGTCTTCTGTAAAGTAGGCAGCCCAATTCCCAAGTCCTTTCTTCTTTGTACACAAAATTGAAATCTCTGTCTGTGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589219.1 |
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| CDS CCA 90 bp | ACAGAGATTTCAATTTTGTGTACAAAGAAGAAAGGACTTGGGAATTaGGCTGCCTACTTTACAGAAGACTCTGGCCTTCAAGCCAGGAGA | + |
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Preference number: 5 (lower is better) Translates to: TEISILCTKKKGLGN*AAYFTEDSGLQARR Trigger: TCTCCTGGCTTGAAGGCCAGAGTCTTCTGTAAAGTAGGCAGCCCAATTCCCAAGTCCTTTCTTCTTTGTACACAAAATTGAAATCTCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589219.1 |
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| CDS GCA 72 bp | CAGAAGGACAGGACCAGCGAGCACCAGGCGGCCAGCTaGTTCTGCCGAGTGTCCACATTCGGTTGTAACCTG | + |
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Preference number: 6 (lower is better) Translates to: QKDRTSEHQAAS*FCRVSTFGCNL Trigger: CAGGTTACAACCGAATGTGGACACTCGGCAGAAGCAGCTGGCCGCCTGGTGCTCGCTGGTCCTGTCCTTCTG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590339.5 |
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| CDS GCA 72 bp | CAGAAGGACAGGACCAGCGAGCACCAGGCGGCCAGCTaGTTCTGCCGAGTGTCCACATTCGGTTGTAACGTA | + |
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Preference number: 6 (lower is better) Translates to: QKDRTSEHQAAS*FCRVSTFGCNV Trigger: TACGTTACAACCGAATGTGGACACTCGGCAGAAGCAGCTGGCCGCCTGGTGCTCGCTGGTCCTGTCCTTCTG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000253794.7 ENST00000589219.1 ENST00000589520.1 ENST00000589577.1 ENST00000591584.1 |
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| CDS CCA 72 bp | AGAGCGGGCTCTCCTGAGCTTCCATCACCGTCATGCTaGACTGTTTGTGCAGGCGGCAGAAGGACAGGACCA | + |
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Preference number: 6 (lower is better) Translates to: RAGSPELPSPSC*TVCAGGRRTGP Trigger: TGGTCCTGTCCTTCTGCCGCCTGCACAAACAGTCCAGCATGACGGTGATGGAAGCTCAGGAGAGCCCGCTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000253794.7 ENST00000589219.1 ENST00000589520.1 ENST00000589577.1 ENST00000590339.5 ENST00000591584.1 |
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| CDS CAA 72 bp | GAGTGGGGCGCAGAATTAGAGGGCGGGAGGCAGCACTaGCCCGGGACGCATTTCAGGAAGAAAGTAAGGGAC | + |
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Preference number: 6 (lower is better) Translates to: EWGAELEGGRQH*PGTHFRKKVRD Trigger: GTCCCTTACTTTCTTCCTGAAATGCGTCCCGGGCAAGTGCTGCCTCCCGCCCTCTAATTCTGCGCCCCACTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000590339.5 |
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| CDS TCA 72 bp | CGCTGTAGCTTGACGTTGTTGAAGAGCGGGCTCTCCTaGGCTTCCATCACCGTCATGCTGGACTGTTTGTGC | + |
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Preference number: 6 (lower is better) Translates to: RCSLTLLKSGLS*ASITVMLDCLC Trigger: GCACAAACAGTCCAGCATGACGGTGATGGAAGCTCAGGAGAGCCCGCTCTTCAACAACGTCAAGCTACAGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000253794.7 ENST00000589219.1 ENST00000589520.1 ENST00000589577.1 ENST00000590339.5 ENST00000591584.1 |
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| CDS TCA 72 bp | GCGCAGAAGTGCATGTGTATGGGCTGTGGAAGAGCCTaGGGGAGGATACGCTGTAGCTTGACGTTGTTGAAG | + |
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Preference number: 6 (lower is better) Translates to: AQKCMCMGCGRA*GRIRCSLTLLK Trigger: CTTCAACAACGTCAAGCTACAGCGTATCCTCCCTCAGGCTCTTCCACAGCCCATACACATGCACTTCTGCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000589577.1 ENST00000591584.1 |
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| CDS GCA 72 bp | TTCGGTTGTAACGTAAAGAAGGGTGGGAAGCGATACTaGCACGGCCACTCGAAACTCATCGCCATCGTAGTA | + |
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Preference number: 6 (lower is better) Translates to: FGCNVKKGGKRY*HGHSKLIAIVV Trigger: TACTACGATGGCGATGAGTTTCGAGTGGCCGTGGCAGTATCGCTTCCCACCCTTCTTTACGTTACAACCGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000253794.7 ENST00000589219.1 ENST00000589577.1 ENST00000591584.1 |
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| CDS GCA 72 bp | GCAGTCATCACTGCCAAGAACAAGAGGGTATGGTACTaGATTTGCCAGGGGAAAATGTCAGCTACACATTTT | + |
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Preference number: 6 (lower is better) Translates to: AVITAKNKRVWY*ICQGKMSATHF Trigger: AAAATGTGTAGCTGACATTTTCCCCTGGCAAATGCAGTACCATACCCTCTTGTTCTTGGCAGTGATGACTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000591584.1 |
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| CDS CAA 90 bp | GGGCACAGACAGAGATTTCAATTTTGTGTACAAAGAAGAAAGGACTaGGGAATTGGGCTGCCTACTTTACAGAAGACTCTGGCCTTCAAG | + |
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Preference number: 6 (lower is better) Translates to: GHRQRFQFCVQRRKD*GIGLPTLQKTLAFK Trigger: CTTGAAGGCCAGAGTCTTCTGTAAAGTAGGCAGCCCAATTCCCAAGTCCTTTCTTCTTTGTACACAAAATTGAAATCTCTGTCTGTGCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589219.1 |
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