RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for VPS13C (Homo sapiens)

Ensembl gene IDs: ENSG00000129003

Ensembl transcript IDs: ENST00000249837.7, ENST00000395898.3, ENST00000558088.1, ENST00000558338.1, ENST00000561258.1, ENST00000644861.2, ENST00000645819.1, ENST00000649766.1, ENST00000650094.1

Found 1605 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CAGTCACTCCACCAACAACTCCTCGCAGAAAGCCCTTTCCTCCTCTaGCCAGGCTGTCTCCAAAATCTCTGGGCTGTCGACTCAACTCTT +
Preference number: 1 (lower is better)
Translates to: QSLHQQLLAESPFLL*PGCLQNLWAVDSTL
Trigger: AAGAGTTGAGTCGACAGCCCAGAGATTTTGGAGACAGCCTGGCCAGAGGAGGAAAGGGCTTTCTGCGAGGAGTTGTTGGTGGAGTGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR CCA 90 bp CCTCAGTTGATTCTGCTGCCCTCTGAATGCCTTGGAAGGTACTACTaGCCATATCTACGATTCCACCAGTTGGACGGGCCACAGCACCCA +
Preference number: 1 (lower is better)
Translates to: PQLILLPSECLGRYY*PYLRFHQLDGPQHP
Trigger: TGGGTGCTGTGGCCCGTCCAACTGGTGGAATCGTAGATATGGCCAGTAGTACCTTCCAAGGCATTCAGAGGGCAGCAGAATCAACTGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR CCA 90 bp GGACTAAAGACAGACAGCACCATCCGGCTGCCAATTCTCCTGACGTaGACTGACAGGTCGACTGTCGTCACTTCTGTGGAGTCAGAAGAA +
Preference number: 1 (lower is better)
Translates to: GLKTDSTIRLPILLT*TDRSTVVTSVESEE
Trigger: TTCTTCTGACTCCACAGAAGTGACGACAGTCGACCTGTCAGTCCACGTCAGGAGAATTGGCAGCCGGATGGTGCTGTCTGTCTTTAGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR TCA 90 bp AAAGACAGACAGCACCATCCGGCTGCCAATTCTCCTGACGTGGACTaGCAGGTCGACTGTCGTCACTTCTGTGGAGTCAGAAGAAAAACA +
Preference number: 1 (lower is better)
Translates to: KDRQHHPAANSPDVD*QVDCRHFCGVRRKT
Trigger: TGTTTTTCTTCTGACTCCACAGAAGTGACGACAGTCGACCTGTCAGTCCACGTCAGGAGAATTGGCAGCCGGATGGTGCTGTCTGTCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR TCA 90 bp TCCATCATCTGTTCGAGTTTGGATGTTGACAGAGAAAGGTTGCACTaGAACGAGGCTGTCAGAGCAGGAGCATCAGCCTTTGTCAGGCTG +
Preference number: 1 (lower is better)
Translates to: SIICSSLDVDRERLH*NEAVRAGASAFVRL
Trigger: CAGCCTGACAAAGGCTGATGCTCCTGCTCTGACAGCCTCGTTTCAGTGCAACCTTTCTCTGTCAACATCCAAACTCGAACAGATGATGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR TCA 90 bp CAGATCTCTCACAGAAGCTTCCATCATCTGTTCGAGTTTGGATGTTaGCAGAGAAAGGTTGCACTGAAACGAGGCTGTCAGAGCAGGAGC +
Preference number: 1 (lower is better)
Translates to: QISHRSFHHLFEFGC*QRKVALKRGCQSRS
Trigger: GCTCCTGCTCTGACAGCCTCGTTTCAGTGCAACCTTTCTCTGTCAACATCCAAACTCGAACAGATGATGGAAGCTTCTGTGAGAGATCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR CCA 90 bp AATGCCTTGGAAGGTACTACTGGCCATATCTACGATTCCACCAGTTaGACGGGCCACAGCACCCACAAGCCCTTTTCCAATTCCTTTAAA +
Preference number: 1 (lower is better)
Translates to: NALEGTTGHIYDSTS*TGHSTHKPFSNSFK
Trigger: TTTAAAGGAATTGGAAAAGGGCTTGTGGGTGCTGTGGCCCGTCCAACTGGTGGAATCGTAGATATGGCCAGTAGTACCTTCCAAGGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR TCA 90 bp TTTCTTCTGCCTGCAGTGCTTTGGAAACCAAGGCAACATCATCGGTaGAAAGCAAAACTCTCTGGCGCCCATCCAGAAATGATACCCAGT +
Preference number: 1 (lower is better)
Translates to: FLLPAVLWKPRQHHR*KAKLSGAHPEMIPS
Trigger: ACTGGGTATCATTTCTGGATGGGCGCCAGAGAGTTTTGCTTTTCACCGATGATGTTGCCTTGGTTTCCAAAGCACTGCAGGCAGAAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR GCA 90 bp AAGCTTCCATCATCTGTTCGAGTTTGGATGTTGACAGAGAAAGGTTaGACTGAAACGAGGCTGTCAGAGCAGGAGCATCAGCCTTTGTCA +
Preference number: 1 (lower is better)
Translates to: KLPSSVRVWMLTEKG*TETRLSEQEHQPLS
Trigger: TGACAAAGGCTGATGCTCCTGCTCTGACAGCCTCGTTTCAGTGCAACCTTTCTCTGTCAACATCCAAACTCGAACAGATGATGGAAGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR CCA 90 bp CAGTTGCATCAATTTGTACCAAGACAGAGTCAGAATGACTGGCATTaGGATTCCGTACATTATACAATCGCCGTCCAGGTCTGGCCACAG +
Preference number: 1 (lower is better)
Translates to: QLHQFVPRQSQNDWH*DSVHYTIAVQVWPQ
Trigger: CTGTGGCCAGACCTGGACGGCGATTGTATAATGTACGGAATCCCAATGCCAGTCATTCTGACTCTGTCTTGGTACAAATTGATGCAACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR GCA 90 bp ATGGTTTGGAAGATCCTTCACAGCCCACCACTCTCACACAAAGTTTaGCTGACAAACTTTCTGGCCAAAATGGAAGGCACTCTGAAGAAG +
Preference number: 1 (lower is better)
Translates to: MVWKILHSPPLSHKV*LTNFLAKMEGTLKK
Trigger: CTTCTTCAGAGTGCCTTCCATTTTGGCCAGAAAGTTTGTCAGGCAAACTTTGTGTGAGAGTGGTGGGCTGTGAAGGATCTTCCAAACCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR GCA 90 bp ATTTGCTGCATATGTCCATGTAAGTTTTCTGGTACCAGTAGGATCTaGCCAGGCAAAAAGTCGAGCCTGTCTTGGCAGCAAGACCATTTC +
Preference number: 1 (lower is better)
Translates to: ICCICPCKFSGTSRI*PGKKSSLSWQQDHF
Trigger: GAAATGGTCTTGCTGCCAAGACAGGCTCGACTTTTTGCCTGGGCAGATCCTACTGGTACCAGAAAACTTACATGGACATATGCAGCAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR GCA 90 bp TGGGGTCTGAGAAGTCTCACTGATGACTGCTTCATCAATTTTTGCTaGTGTCTCGTTGACTGTGCATCCTCAATGGCATTACATGCTCTC +
Preference number: 1 (lower is better)
Translates to: WGLRSLTDDCFINFC*CLVDCASSMALHAL
Trigger: GAGAGCATGTAATGCCATTGAGGATGCACAGTCAACGAGACAGCAGCAAAAATTGATGAAGCAGTCATCAGTGAGACTTCTCAGACCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR CCA 90 bp GACTGGCATTGGGATTCCGTACATTATACAATCGCCGTCCAGGTCTaGCCACAGGGATATTTGCAACTTCTGTATATCCATGAGGTACAA +
Preference number: 1 (lower is better)
Translates to: DWHWDSVHYTIAVQV*PQGYLQLLYIHEVQ
Trigger: TTGTACCTCATGGATATACAGAAGTTGCAAATATCCCTGTGGCCAGACCTGGACGGCGATTGTATAATGTACGGAATCCCAATGCCAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR CCA 90 bp TCCCTTCAGTTGCATCAATTTGTACCAAGACAGAGTCAGAATGACTaGCATTGGGATTCCGTACATTATACAATCGCCGTCCAGGTCTGG +
Preference number: 1 (lower is better)
Translates to: SLQLHQFVPRQSQND*HWDSVHYTIAVQVW
Trigger: CCAGACCTGGACGGCGATTGTATAATGTACGGAATCCCAATGCCAGTCATTCTGACTCTGTCTTGGTACAAATTGATGCAACTGAAGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR CCA 90 bp GCTTTGGAAACCAAGGCAACATCATCGGTGAAAAGCAAAACTCTCTaGCGCCCATCCAGAAATGATACCCAGTGTATCTGGATGTTTGCA +
Preference number: 1 (lower is better)
Translates to: ALETKATSSVKSKTL*RPSRNDTQCIWMFA
Trigger: TGCAAACATCCAGATACACTGGGTATCATTTCTGGATGGGCGCCAGAGAGTTTTGCTTTTCACCGATGATGTTGCCTTGGTTTCCAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR TCA 90 bp GGCAGGTGCAGATCCCTCATGGTAATCAGAAAAAGTTATGACAGTTaGATGTTCGGCAGTGTTTACATCCACCAAGATACCCCCATTCAG +
Preference number: 1 (lower is better)
Translates to: GRCRSLMVIRKSYDS*MFGSVYIHQDTPIQ
Trigger: CTGAATGGGGGTATCTTGGTGGATGTAAACACTGCCGAACATTCAACTGTCATAACTTTTTCTGATTACCATGAGGGATCTGCACCTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR GCA 90 bp CCGTACATTATACAATCGCCGTCCAGGTCTGGCCACAGGGATATTTaGAACTTCTGTATATCCATGAGGTACAATGGTCAGAGTGAAGAA +
Preference number: 1 (lower is better)
Translates to: PYIIQSPSRSGHRDI*NFCISMRYNGQSEE
Trigger: TTCTTCACTCTGACCATTGTACCTCATGGATATACAGAAGTTGCAAATATCCCTGTGGCCAGACCTGGACGGCGATTGTATAATGTACGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR TCA 90 bp TTTTGCCCTGGTATTTCACCAGGACTAATTCCATTATTTCACCACTaGTTCTCGAATGCAGAACATCAGCAGTACTGCCTTCTGCCAGCT +
Preference number: 1 (lower is better)
Translates to: FCPGISPGLIPLFHH*FSNAEHQQYCLLPA
Trigger: AGCTGGCAGAAGGCAGTACTGCTGATGTTCTGCATTCGAGAATCAGTGGTGAAATAATGGAATTAGTCCTGGTGAAATACCAGGGCAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR TCA 90 bp AACATCATCGGTGAAAAGCAAAACTCTCTGGCGCCCATCCAGAAATaGTACCCAGTGTATCTGGATGTTTGCATCATATGGAAACTGTCC +
Preference number: 1 (lower is better)
Translates to: NIIGEKQNSLAPIQK*YPVYLDVCIIWKLS
Trigger: GGACAGTTTCCATATGATGCAAACATCCAGATACACTGGGTATCATTTCTGGATGGGCGCCAGAGAGTTTTGCTTTTCACCGATGATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR GCA 90 bp AATTGGGGTCTGAGAAGTCTCACTGATGACTGCTTCATCAATTTTTaGTGCTGTCTCGTTGACTGTGCATCCTCAATGGCATTACATGCT +
Preference number: 1 (lower is better)
Translates to: NWGLRSLTDDCFINF*CCLVDCASSMALHA
Trigger: AGCATGTAATGCCATTGAGGATGCACAGTCAACGAGACAGCAGCAAAAATTGATGAAGCAGTCATCAGTGAGACTTCTCAGACCCCAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR CCA 90 bp TCTGAGTTTGAAGTGACGTTTCTTCAAGGGTCTGACCCATTTGGGTaGTGGCGTAGAAGTGGACTGCTAGCATATACATGGTTACAAAAT +
Preference number: 1 (lower is better)
Translates to: SEFEVTFLQGSDPFG*WRRSGLLAYTWLQN
Trigger: ATTTTGTAACCATGTATATGCTAGCAGTCCACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAACGTCACTTCAAACTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
3UTR CCA 90 bp AGCAAAACTCTCTGGCGCCCATCCAGAAATGATACCCAGTGTATCTaGATGTTTGCATCATATGGAAACTGTCCACATCCATCCTTTAAC +
Preference number: 1 (lower is better)
Translates to: SKTLWRPSRNDTQCI*MFASYGNCPHPSFN
Trigger: GTTAAAGGATGGATGTGGACAGTTTCCATATGATGCAAACATCCAGATACACTGGGTATCATTTCTGGATGGGCGCCAGAGAGTTTTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR TCA 90 bp TTATTCCCTTCAGTTGCATCAATTTGTACCAAGACAGAGTCAGAATaGCTGGCATTGGGATTCCGTACATTATACAATCGCCGTCCAGGT +
Preference number: 1 (lower is better)
Translates to: LFPSVASICTKTESE*LALGFRTLYNRRPG
Trigger: ACCTGGACGGCGATTGTATAATGTACGGAATCCCAATGCCAGTCATTCTGACTCTGTCTTGGTACAAATTGATGCAACTGAAGGGAATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR TCA 90 bp TTATCAAGGCAGGTGCAGATCCCTCATGGTAATCAGAAAAAGTTATaGCAGTTGAATGTTCGGCAGTGTTTACATCCACCAAGATACCCC +
Preference number: 1 (lower is better)
Translates to: LSRQVQIPHGNQKKL*QLNVRQCLHPPRYP
Trigger: GGGGTATCTTGGTGGATGTAAACACTGCCGAACATTCAACTGTCATAACTTTTTCTGATTACCATGAGGGATCTGCACCTGCCTTGATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR GCA 90 bp TGCCACATTTTCTGGACTCTGAGGCACAGCTTTGATAAAGAAATCTaGCACAGTCATCAGAAATTCCACACTGGCACATACATACAGCTT +
Preference number: 1 (lower is better)
Translates to: CHIFWTLRHSFDKEI*HSHQKFHTGTYIQL
Trigger: AAGCTGTATGTATGTGCCAGTGTGGAATTTCTGATGACTGTGGCAGATTTCTTTATCAAAGCTGTGCCTCAGAGTCCAGAAAATGTGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR CCA 90 bp AGCTCAATAAAGTGCCATTATCCTGTCGGTTATAAAAGAATGGTTTaGAAGATCCTTCACAGCCCACCACTCTCACACAAAGTTTGCCTG +
Preference number: 1 (lower is better)
Translates to: SSIKCHYPVGYKRMV*KILHSPPLSHKVCL
Trigger: CAGGCAAACTTTGTGTGAGAGTGGTGGGCTGTGAAGGATCTTCCAAACCATTCTTTTATAACCGACAGGATAATGGCACTTTATTGAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR TCA 90 bp ATAAGGAAGAGGAATCCACAAAGAACTGGGATCTCATCTTCAGAATaGGTCTCAGAGAGGAGTGCAGATTTCACAGCAATAGCTACTTGT +
Preference number: 1 (lower is better)
Translates to: IRKRNPQRTGISSSE*VSERSADFTAIATC
Trigger: ACAAGTAGCTATTGCTGTGAAATCTGCACTCCTCTCTGAGACTCATTCTGAAGATGAGATCCCAGTTCTTTGTGGATTCCTCTTCCTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000645819.1
ENST00000650094.1
3UTR CCA 90 bp GGTAGTGTATCACGTATGCGGAAATGTCCATTCCAGTTTTTGCCCTaGTATTTCACCAGGACTAATTCCATTATTTCACCACTGATTCTC +
Preference number: 1 (lower is better)
Translates to: GSVSRMRKCPFQFLP*YFTRTNSIISPLIL
Trigger: GAGAATCAGTGGTGAAATAATGGAATTAGTCCTGGTGAAATACCAGGGCAAAAACTGGAATGGACATTTCCGCATACGTGATACACTACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR GCA 90 bp ACAAAGAACTGGGATCTCATCTTCAGAATGAGTCTCAGAGAGGAGTaGAGATTTCACAGCAATAGCTACTTGTTTCACAATTCACTTGTG +
Preference number: 1 (lower is better)
Translates to: TKNWDLIFRMSLREE*RFHSNSYLFHNSLV
Trigger: CACAAGTGAATTGTGAAACAAGTAGCTATTGCTGTGAAATCTGCACTCCTCTCTGAGACTCATTCTGAAGATGAGATCCCAGTTCTTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000645819.1
ENST00000650094.1
3UTR CCA 90 bp CAATTGCAAAAAGCCATGAATAAGGAAGAGGAATCCACAAAGAACTaGGATCTCATCTTCAGAATGAGTCTCAGAGAGGAGTGCAGATTT +
Preference number: 1 (lower is better)
Translates to: QLQKAMNKEEESTKN*DLIFRMSLREECRF
Trigger: AAATCTGCACTCCTCTCTGAGACTCATTCTGAAGATGAGATCCCAGTTCTTTGTGGATTCCTCTTCCTTATTCATGGCTTTTTGCAATTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000645819.1
ENST00000650094.1
3UTR TCA 90 bp TATCCCAATATAGGAAACTTCCTGCTTGCTTTCATTGTTAACCAGTaGAAGCCCAAGACTGTGGAGAGACAAGGTTATTTCATAATCAGC +
Preference number: 1 (lower is better)
Translates to: YPNIGNFLLAFIVNQ*KPKTVERQGYFIIS
Trigger: GCTGATTATGAAATAACCTTGTCTCTCCACAGTCTTGGGCTTTCACTGGTTAACAATGAAAGCAAGCAGGAAGTTTCCTATATTGGGATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR GCA 90 bp CATCCACCAAGATACCCCCATTCAGATCTTCTAAGCTCAATAAAGTaGCATTATCCTGTCGGTTATAAAAGAATGGTTTGGAAGATCCTT +
Preference number: 1 (lower is better)
Translates to: HPPRYPHSDLLSSIK*HYPVGYKRMVWKIL
Trigger: AAGGATCTTCCAAACCATTCTTTTATAACCGACAGGATAATGGCACTTTATTGAGCTTAGAAGATCTGAATGGGGGTATCTTGGTGGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR TCA 90 bp AACTTGAATGGATTCTACAACAACACCACAATTTTCCTCTATCAGTaGATGTTCAATGCCTTTGAAGCTTTCCGTTATTTCTGTTGCCGT +
Preference number: 1 (lower is better)
Translates to: NLNGFYNNTTIFLYQ*MFNAFEAFRYFCCR
Trigger: ACGGCAACAGAAATAACGGAAAGCTTCAAAGGCATTGAACATTCACTGATAGAGGAAAATTGTGGTGTTGTTGTAGAATCCATTCAAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR TCA 90 bp AATAAAGGTACAGTTCGATGTCCAAGGCCACATTCTAAGGTAACTTaGATGGATTCTACAACAACACCACAATTTTCCTCTATCAGTGAA +
Preference number: 1 (lower is better)
Translates to: NKGTVRCPRPHSKVT*MDSTTTPQFSSISE
Trigger: TTCACTGATAGAGGAAAATTGTGGTGTTGTTGTAGAATCCATTCAAGTTACCTTAGAATGTGGCCTTGGACATCGAACTGTACCTTTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR GCA 90 bp TTTTCACTGACACTAGGAGGAAATACAAAATCTTCAAATGGACATTaGCAGTCTACACACATAAGGCCCAGGATTTCAACTTCCTTTATA +
Preference number: 1 (lower is better)
Translates to: FSLTLGGNTKSSNGH*QSTHIRPRISTSFI
Trigger: TATAAAGGAAGTTGAAATCCTGGGCCTTATGTGTGTAGACTGGCAATGTCCATTTGAAGATTTTGTATTTCCTCCTAGTGTCAGTGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR-3UTR TCA 90 bp TCGTTGACTGTGCATCCTCAATGGCATTACATGCTCTCTCTGCTGTGGCGGTGTTCCCTCTCTTTTCTCTaGGAAAAGGGCAAGCGAGCA +
Preference number: 2 (lower is better)
Translates to: SLTVHPQWHYMLSLLWRCSLSFL*EKGKRA
Trigger: TGCTCGCTTGCCCTTTTCTCAGAGAAAAGAGAGGGA...ACACCGCCACAGCAGAGAGAGCATGTAATGCCATTGAGGATGCACAGTCAACGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR-3UTR TCA 90 bp TCGTTGACTGTGCATCCTCAATGGCATTACATGCTCTCTCTGCTGTGGCGGTGTTCCCAACAGAACCGGTaGTTCGAGATACAACTCCTG +
Preference number: 2 (lower is better)
Translates to: SLTVHPQWHYMLSLLWRCSQQNR*FEIQLL
Trigger: CAGGAGTTGTATCTCGAATCACCGGTTCTGTTGGGA...ACACCGCCACAGCAGAGAGAGCATGTAATGCCATTGAGGATGCACAGTCAACGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR-3UTR GCA 90 bp CCTGAATTGATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATCCAAGATCGCACCACTaGATTCCAGCCTGGGCGACA +
Preference number: 2 (lower is better)
Translates to: PELILTGPAPSQNTVSLYPRSHH*IPAWAT
Trigger: TGTCGCCCAGGCTGGAATGCAGTGGTGCGATCTTGG...ATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATCAATTCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
3UTR-3UTR CCA 90 bp TCGTTGACTGTGCATCCTCAATGGCATTACATGCTCTCTCTGCTGTGGCGGTGTCACTCTCTCAATCAGTaGCTCCCAGACAGCATGGAT +
Preference number: 2 (lower is better)
Translates to: SLTVHPQWHYMLSLLWRCHSLNQ*LPDSMD
Trigger: ATCCATGCTGTCTGGGAGCCACTGATTGAGAGAGTG...ACACCGCCACAGCAGAGAGAGCATGTAATGCCATTGAGGATGCACAGTCAACGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR-3UTR CCA 90 bp GCAAAACTCTCTGGCGCCCATCCAGAAATGATACCCAGTGTATCTGGATGTTTGGACCCATTTGGGTGGTaGCGTAGAAGTGGACTGCTA +
Preference number: 2 (lower is better)
Translates to: AKLSGAHPEMIPSVSGCLDPFGW*RRSGLL
Trigger: TAGCAGTCCACTTCTACGCCACCACCCAAATGGGTC...CAAACATCCAGATACACTGGGTATCATTTCTGGATGGGCGCCAGAGAGTTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR-3UTR CCA 90 bp GTCTCGTTGACTGTGCATCCTCAATGGCATTACATGCTCTCTCTGCTGTGGCGGTGTCTCCAAAATCTCTaGGCTGTCGACTCAACTCTT +
Preference number: 2 (lower is better)
Translates to: VSLTVHPQWHYMLSLLWRCLQNL*AVDSTL
Trigger: AAGAGTTGAGTCGACAGCCCAGAGATTTTGGAGACA...CCGCCACAGCAGAGAGAGCATGTAATGCCATTGAGGATGCACAGTCAACGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR-3UTR TCA 90 bp GCCTGCAGTGCTTTGGAAACCAAGGCAACATCATCGGTGAAAAGCAAAACTCTCAGAGAAAGGTTGCACTaGAACGAGGCTGTCAGAGCA +
Preference number: 2 (lower is better)
Translates to: ACSALETKATSSVKSKTLRERLH*NEAVRA
Trigger: TGCTCTGACAGCCTCGTTTCAGTGCAACCTTTCTCT...GAGAGTTTTGCTTTTCACCGATGATGTTGCCTTGGTTTCCAAAGCACTGCAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR-3UTR TCA 90 bp GTCTCGTTGACTGTGCATCCTCAATGGCATTACATGCTCTCTCTGCTGTGGCGGGAAGATTCCGCAAAGTaGGAGAAGGATAAAGATGAA +
Preference number: 2 (lower is better)
Translates to: VSLTVHPQWHYMLSLLWREDSAK*EKDKDE
Trigger: TTCATCTTTATCCTTCTCTCACTTTGCGGAATCTTC...CCGCCACAGCAGAGAGAGCATGTAATGCCATTGAGGATGCACAGTCAACGAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR-3UTR GCA 90 bp TCGTTGACTGTGCATCCTCAATGGCATTACATGCTCTCTCTGCTGTGGCGGTGTGTAGTGTATCACGTATaGGGAAATGTCCATTCCAGT +
Preference number: 2 (lower is better)
Translates to: SLTVHPQWHYMLSLLWRCVVYHV*GNVHSS
Trigger: ACTGGAATGGACATTTCCGCATACGTGATACACTAC...ACACCGCCACAGCAGAGAGAGCATGTAATGCCATTGAGGATGCACAGTCAACGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR-3UTR CCA 90 bp GTCTCGTTGACTGTGCATCCTCAATGGCATTACATGCTCTCTCTGCTGTGGCGGAACAAATACCACTTCTaGATCTGTGATCATGGCCTT +
Preference number: 2 (lower is better)
Translates to: VSLTVHPQWHYMLSLLWRNKYHF*ICDHGL
Trigger: AAGGCCATGATCACAGATCCAGAAGTGGTATTTGTT...CCGCCACAGCAGAGAGAGCATGTAATGCCATTGAGGATGCACAGTCAACGAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR-3UTR CCA 90 bp GCCTGCAGTGCTTTGGAAACCAAGGCAACATCATCGGTGAAAAGCAAAACTCTCTCTTCTGAACGATACTaGAGAACCCGGGTAGTCTTG +
Preference number: 2 (lower is better)
Translates to: ACSALETKATSSVKSKTLSSERY*RTRVVL
Trigger: CAAGACTACCCGGGTTCTCCAGTATCGTTCAGAAGA...GAGAGTTTTGCTTTTCACCGATGATGTTGCCTTGGTTTCCAAAGCACTGCAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR-3UTR TCA 90 bp TTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGGACTGCTAGCACAAGATAAAGCAGAGTaGCTTATAGACAAGACCAGT +
Preference number: 2 (lower is better)
Translates to: FLQGSDPFGWWRRSGLLAQDKAE*LIDKTS
Trigger: ACTGGTCTTGTCTATAAGTCACTCTGCTTTATCTTG...TGCTAGCAGTCCACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
3UTR-3UTR TCA 90 bp CCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCCATGTTTCTTCAAGGGTCTaGCCCATTTGGGTGGTGGCG +
Preference number: 2 (lower is better)
Translates to: PLSHINKNRANQACPHLHVSSRV*PIWVVA
Trigger: CGCCACCACCCAAATGGGTCAGACCCTTGAAGAAAC...ATGGAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
3UTR-3UTR TCA 90 bp TCGTTGACTGTGCATCCTCAATGGCATTACATGCTCTCTCTGCTGTGGCGGTGTTGGAAACTGTCATTATaGAATGCAACTCCAGATTCC +
Preference number: 2 (lower is better)
Translates to: SLTVHPQWHYMLSLLWRCWKLSL*NATPDS
Trigger: GGAATCTGGAGTTGCATTTCATAATGACAGTTTCCA...ACACCGCCACAGCAGAGAGAGCATGTAATGCCATTGAGGATGCACAGTCAACGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR-3UTR TCA 90 bp CTCTCACACAAAGTTTGCCTGACAAACTTTCTGGCCAAAATGGAAGGCACTCTGCATCTTTCTCTATCTTaGCCTTCCCTGTGGCAGTCT +
Preference number: 2 (lower is better)
Translates to: LSHKVCLTNFLAKMEGTLHLSLS*PSLWQS
Trigger: AGACTGCCACAGGGAAGGTCAAGATAGAGAAAGATG...CAGAGTGCCTTCCATTTTGGCCAGAAAGTTTGTCAGGCAAACTTTGTGTGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR-3UTR TCA 90 bp GCAAAACTCTCTGGCGCCCATCCAGAAATGATACCCAGTGTATCTGGATGTTTGCCACTTCTGGATCTGTaGTCATGGCCTTTAAAGTCA +
Preference number: 2 (lower is better)
Translates to: AKLSGAHPEMIPSVSGCLPLLDL*SWPLKS
Trigger: TGACTTTAAAGGCCATGATCACAGATCCAGAAGTGG...CAAACATCCAGATACACTGGGTATCATTTCTGGATGGGCGCCAGAGAGTTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR-3UTR TCA 90 bp GCCTGCAGTGCTTTGGAAACCAAGGCAACATCATCGGTGAAAAGCAAAACTCTCCACTCTGTTTGTATGTaGGGATGTCCCATGGTGTAT +
Preference number: 2 (lower is better)
Translates to: ACSALETKATSSVKSKTLHSVCM*GCPMVY
Trigger: ATACACCATGGGACATCCTCACATACAAACAGAGTG...GAGAGTTTTGCTTTTCACCGATGATGTTGCCTTGGTTTCCAAAGCACTGCAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR-3UTR GCA 90 bp CCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCCATCCGAGAGGCAGAGATTaGAGTGAGCCAAGATCGCAC +
Preference number: 2 (lower is better)
Translates to: PLSHINKNRANQACPHLHPRGRD*SEPRSH
Trigger: GTGCGATCTTGGCTCACTGCAATCTCTGCCTCTCGG...ATGGAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
3UTR-3UTR GCA 90 bp GCAAAACTCTCTGGCGCCCATCCAGAAATGATACCCAGTGTATCTGGATGTTTGCTCTCACACAAAGTTTaGCTGACAAACTTTCTGGCC +
Preference number: 2 (lower is better)
Translates to: AKLSGAHPEMIPSVSGCLLSHKV*LTNFLA
Trigger: GGCCAGAAAGTTTGTCAGGCAAACTTTGTGTGAGAG...CAAACATCCAGATACACTGGGTATCATTTCTGGATGGGCGCCAGAGAGTTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR-3UTR CCA 90 bp TGCCTGACAAACTTTCTGGCCAAAATGGAAGGCACTCTGAAGAAGCAATATAGTATCGCCGTCCAGGTCTaGCCACAGGGATATTTGCAA +
Preference number: 2 (lower is better)
Translates to: CLTNFLAKMEGTLKKQYSIAVQV*PQGYLQ
Trigger: TTGCAAATATCCCTGTGGCCAGACCTGGACGGCGAT...ACTATATTGCTTCTTCAGAGTGCCTTCCATTTTGGCCAGAAAGTTTGTCAGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR CAA 90 bp AATGGTTTGGAAGATCCTTCACAGCCCACCACTCTCACACAAAGTTaGCCTGACAAACTTTCTGGCCAAAATGGAAGGCACTCTGAAGAA +
Preference number: 2 (lower is better)
Translates to: NGLEDPSQPTTLTQS*PDKLSGQNGRHSEE
Trigger: TTCTTCAGAGTGCCTTCCATTTTGGCCAGAAAGTTTGTCAGGCAAACTTTGTGTGAGAGTGGTGGGCTGTGAAGGATCTTCCAAACCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR-3UTR TCA 90 bp AATACAAAATCTTCAAATGGACATTGCCAGTCTACACACATAAGGCCCAGGATTAGGCAGAGATTGCAGTaGGCCAAGATCGCACCACTG +
Preference number: 2 (lower is better)
Translates to: NTKSSNGHCQSTHIRPRIRQRLQ*AKIAPL
Trigger: CAGTGGTGCGATCTTGGCTCACTGCAATCTCTGCCT...AATCCTGGGCCTTATGTGTGTAGACTGGCAATGTCCATTTGAAGATTTTGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR-3UTR TCA 90 bp CTCTCACACAAAGTTTGCCTGACAAACTTTCTGGCCAAAATGGAAGGCACTCTGGTACAATGGTCAGAGTaGAGAAGGAGCTTTCTTGAC +
Preference number: 2 (lower is better)
Translates to: LSHKVCLTNFLAKMEGTLVQWSE*RRSFLD
Trigger: GTCAAGAAAGCTCCTTCTTCACTCTGACCATTGTAC...CAGAGTGCCTTCCATTTTGGCCAGAAAGTTTGTCAGGCAAACTTTGTGTGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR-3UTR GCA 90 bp CTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCAAGAATGTTAACCCAAGATCGCACCACTaGATTCCAGCCTGGGCGACA +
Preference number: 2 (lower is better)
Translates to: LPLVTFLHSITWFTKNVNPRSHH*IPAWAT
Trigger: TGTCGCCCAGGCTGGAATGCAGTGGTGCGATCTTGG...GTTAACATTCTTGGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
3UTR-3UTR GCA 90 bp GATACCCCAAAGATTTTCCATTTCCTTAGACGTATCTTTGGATCCATCTTCTTTCCAAGATCGCACCACTaGATTCCAGCCTGGGCGACA +
Preference number: 2 (lower is better)
Translates to: DTPKIFHFLRRIFGSIFFPRSHH*IPAWAT
Trigger: TGTCGCCCAGGCTGGAATGCAGTGGTGCGATCTTGG...AAAGAAGATGGATCCAAAGATACGTCTAAGGAAATGGAAAATCTTTGGGGTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR-3UTR GCA 90 bp GAACCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCGATTCTCACAGGGCCTaGTCCCTCACAGAACACAGT +
Preference number: 2 (lower is better)
Translates to: EPLSHINKNRANQACPHLDSHRA*SLTEHS
Trigger: ACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATC...GAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
3UTR-3UTR CCA 90 bp CCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCCATGACCCATTTGGGTGGTaGCGTAGAAGTGGACTGCTA +
Preference number: 2 (lower is better)
Translates to: PLSHINKNRANQACPHLHDPFGW*RRSGLL
Trigger: TAGCAGTCCACTTCTACGCCACCACCCAAATGGGTC...ATGGAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
3UTR-3UTR CCA 90 bp GCAAAACTCTCTGGCGCCCATCCAGAAATGATACCCAGTGTATCTGGATGTTTGGAATCTAAAGGAACATaGAACTCCTCTTCAGGTCTG +
Preference number: 2 (lower is better)
Translates to: AKLSGAHPEMIPSVSGCLESKGT*NSSSGL
Trigger: CAGACCTGAAGAGGAGTTCCATGTTCCTTTAGATTC...CAAACATCCAGATACACTGGGTATCATTTCTGGATGGGCGCCAGAGAGTTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR CAA 90 bp CTCTCTGGCGCCCATCCAGAAATGATACCCAGTGTATCTGGATGTTaGCATCATATGGAAACTGTCCACATCCATCCTTTAACAGATCAT +
Preference number: 2 (lower is better)
Translates to: LSGAHPEMIPSVSGC*HHMETVHIHPLTDH
Trigger: ATGATCTGTTAAAGGATGGATGTGGACAGTTTCCATATGATGCAAACATCCAGATACACTGGGTATCATTTCTGGATGGGCGCCAGAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR-3UTR TCA 90 bp AACATGTCATTTCTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCGTTTCTTCAAGGGTCTaGCCCATTTGGGTGGTGGCG +
Preference number: 2 (lower is better)
Translates to: NMSFLPLVTFLHSITWFTVSSRV*PIWVVA
Trigger: CGCCACCACCCAAATGGGTCAGACCCTTGAAGAAAC...GGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAGAAATGACATGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
3UTR-3UTR TCA 90 bp CCTGAATTGATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATATTCTGAGTTTGAAGTaGCGTTTCTTCAAGGGTCTG +
Preference number: 2 (lower is better)
Translates to: PELILTGPAPSQNTVSLYILSLK*RFFKGL
Trigger: CAGACCCTTGAAGAAACGTCACTTCAAACTCAGAAT...ATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATCAATTCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
3UTR-3UTR TCA 90 bp CTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCAAGAATGTTAACAGGCAGAGATTGCAGTaGGCCAAGATCGCACCACTG +
Preference number: 2 (lower is better)
Translates to: LPLVTFLHSITWFTKNVNRQRLQ*AKIAPL
Trigger: CAGTGGTGCGATCTTGGCTCACTGCAATCTCTGCCT...GTTAACATTCTTGGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
3UTR-3UTR TCA 90 bp GCAAAACTCTCTGGCGCCCATCCAGAAATGATACCCAGTGTATCTGGATGTTTGGCTGGATGTTTCACATaGATATCTTCTGAACGATAC +
Preference number: 2 (lower is better)
Translates to: AKLSGAHPEMIPSVSGCLAGCFT*ISSERY
Trigger: GTATCGTTCAGAAGATATTCATGTGAAACATCCAGC...CAAACATCCAGATACACTGGGTATCATTTCTGGATGGGCGCCAGAGAGTTTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR-3UTR TCA 90 bp CTCTCACACAAAGTTTGCCTGACAAACTTTCTGGCCAAAATGGAAGGCACTCTGCAGGGTAACTATTCGTaGAAGGTTGAAACTGCTCAT +
Preference number: 2 (lower is better)
Translates to: LSHKVCLTNFLAKMEGTLQGNYS*KVETAH
Trigger: ATGAGCAGTTTCAACCTTTCACGAATAGTTACCCTG...CAGAGTGCCTTCCATTTTGGCCAGAAAGTTTGTCAGGCAAACTTTGTGTGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR-3UTR GCA 90 bp AACATGTCATTTCTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCCCGAGAGGCAGAGATTaGAGTGAGCCAAGATCGCAC +
Preference number: 2 (lower is better)
Translates to: NMSFLPLVTFLHSITWFTPRGRD*SEPRSH
Trigger: GTGCGATCTTGGCTCACTGCAATCTCTGCCTCTCGG...GGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAGAAATGACATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
3UTR-3UTR GCA 90 bp CTCTCACACAAAGTTTGCCTGACAAACTTTCTGGCCAAAATGGAAGGCACTCTGGGCCACAGGGATATTTaGAACTTCTGTATATCCATG +
Preference number: 2 (lower is better)
Translates to: LSHKVCLTNFLAKMEGTLGHRDI*NFCISM
Trigger: CATGGATATACAGAAGTTGCAAATATCCCTGTGGCC...CAGAGTGCCTTCCATTTTGGCCAGAAAGTTTGTCAGGCAAACTTTGTGTGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR-3UTR CCA 90 bp GATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATATGCCTTATCCAACATTTGTTCATaGGTTAAAGCCTTTTGGCGG +
Preference number: 2 (lower is better)
Translates to: DSHRACSLTEHSVIIYALSNICS*VKAFWR
Trigger: CCGCCAAAAGGCTTTAACCCATGAACAAATGTTGGA...TAAGGCATATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
3UTR-3UTR CCA 90 bp CCTGAATTGATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATTCCAACATTTGTTCATaGGTTAAAGCCTTTTGGCGG +
Preference number: 2 (lower is better)
Translates to: PELILTGPAPSQNTVSLYSNICS*VKAFWR
Trigger: CCGCCAAAAGGCTTTAACCCATGAACAAATGTTGGA...ATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATCAATTCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
3UTR-3UTR CCA 90 bp CTCTCACACAAAGTTTGCCTGACAAACTTTCTGGCCAAAATGGAAGGCACTCTGTTGAAGGTACCATGCTaGCATACTCCAGTTCCAAAT +
Preference number: 2 (lower is better)
Translates to: LSHKVCLTNFLAKMEGTLLKVPC*HTPVPN
Trigger: ATTTGGAACTGGAGTATGCCAGCATGGTACCTTCAA...CAGAGTGCCTTCCATTTTGGCCAGAAAGTTTGTCAGGCAAACTTTGTGTGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR-3UTR CCA 90 bp CTCTCACACAAAGTTTGCCTGACAAACTTTCTGGCCAAAATGGAAGGCACTCTGATGACTTGTTTGCAATaGTACAAAAGGGAGTCAGGG +
Preference number: 2 (lower is better)
Translates to: LSHKVCLTNFLAKMEGTLMTCLQ*YKRESG
Trigger: CCCTGACTCCCTTTTGTACCATTGCAAACAAGTCAT...CAGAGTGCCTTCCATTTTGGCCAGAAAGTTTGTCAGGCAAACTTTGTGTGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR CAA 90 bp GTCTCCAAAATCTCTGGGCTGTCGACTCAACTCTTCTCTTCTTTTTaGCTGATATTCCTTGTCCATTGTAATTGCTGCCAAACCTTTCCC +
Preference number: 2 (lower is better)
Translates to: VSKISGLSTQLFSSF*LIFLVHCNCCQTFP
Trigger: GGGAAAGGTTTGGCAGCAATTACAATGGACAAGGAATATCAGCAAAAAAGAAGAGAAGAGTTGAGTCGACAGCCCAGAGATTTTGGAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR-3UTR TCA 90 bp GATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATATGCCTTACAAGATAAAGCAGAGTaGCTTATAGACAAGACCAGT +
Preference number: 2 (lower is better)
Translates to: DSHRACSLTEHSVIIYALQDKAE*LIDKTS
Trigger: ACTGGTCTTGTCTATAAGTCACTCTGCTTTATCTTG...TAAGGCATATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
3UTR-3UTR TCA 90 bp GCCTGCAGTGCTTTGGAAACCAAGGCAACATCATCGGTGAAAAGCAAAACTCTCCTCCAGATTCCTGGTTaGTATCATTGTTATAAAGGA +
Preference number: 2 (lower is better)
Translates to: ACSALETKATSSVKSKTLLQIPG*YHCYKG
Trigger: TCCTTTATAACAATGATATCAACCAGGAATCTGGAG...GAGAGTTTTGCTTTTCACCGATGATGTTGCCTTGGTTTCCAAAGCACTGCAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR-3UTR GCA 90 bp CTCTCACACAAAGTTTGCCTGACAAACTTTCTGGCCAAAATGGAAGGCACTCTGTTCCGTTATTTCTGTTaGCGTGTCAACACCAAGAAA +
Preference number: 2 (lower is better)
Translates to: LSHKVCLTNFLAKMEGTLFRYFC*RVNTKK
Trigger: TTTCTTGGTGTTGACACGGCAACAGAAATAACGGAA...CAGAGTGCCTTCCATTTTGGCCAGAAAGTTTGTCAGGCAAACTTTGTGTGAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR-3UTR GCA 90 bp TCGTTTAATAGGGCTACGAATAGGGAGGCGCATTTCCATTGGATCTTTATCAAAGACTTGAAGGTACCATaGTGGCATACTCCAGTTCCA +
Preference number: 2 (lower is better)
Translates to: SFNRATNREAHFHWIFIKDLKVP*WHTPVP
Trigger: TGGAACTGGAGTATGCCAGCATGGTACCTTCAAGTC...TTTGATAAAGATCCAATGGAAATGCGCCTCCCTATTCGTAGCCCTATTAAACGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR-3UTR GCA 90 bp AATACAAAATCTTCAAATGGACATTGCCAGTCTACACACATAAGGCCCAGGATTAGCAGTACTGCCTTCTaGCAGCTCATGAGTTTCTGC +
Preference number: 2 (lower is better)
Translates to: NTKSSNGHCQSTHIRPRISSTAF*QLMSFC
Trigger: GCAGAAACTCATGAGCTGGCAGAAGGCAGTACTGCT...AATCCTGGGCCTTATGTGTGTAGACTGGCAATGTCCATTTGAAGATTTTGTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR-3UTR CCA 90 bp AACATGTCATTTCTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCGACCCATTTGGGTGGTaGCGTAGAAGTGGACTGCTA +
Preference number: 2 (lower is better)
Translates to: NMSFLPLVTFLHSITWFTDPFGW*RRSGLL
Trigger: TAGCAGTCCACTTCTACGCCACCACCCAAATGGGTC...GGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAGAAATGACATGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
3UTR CAA 90 bp GAGCCATCAGATGCAATCTCGCCAACTTCTAGTTCTAATGATGACTaGTTTGCAATGGTACAAAAGGGAGTCAGGGTAACTATTCGTGAA +
Preference number: 2 (lower is better)
Translates to: EPSDAISPTSSSNDD*FAMVQKGVRVTIRE
Trigger: TTCACGAATAGTTACCCTGACTCCCTTTTGTACCATTGCAAACAAGTCATCATTAGAACTAGAAGTTGGCGAGATTGCATCTGATGGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR-3UTR TCA 90 bp AATACAAAATCTTCAAATGGACATTGCCAGTCTACACACATAAGGCCCAGGATTGGAGGGGCAACAGGATaGAATACAACAGGGAACATT +
Preference number: 2 (lower is better)
Translates to: NTKSSNGHCQSTHIRPRIGGATG*NTTGNI
Trigger: AATGTTCCCTGTTGTATTTCATCCTGTTGCCCCTCC...AATCCTGGGCCTTATGTGTGTAGACTGGCAATGTCCATTTGAAGATTTTGTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR-3UTR CCA 90 bp AATACAAAATCTTCAAATGGACATTGCCAGTCTACACACATAAGGCCCAGGATTGGTACTCCATATTGTTaGCAGGACACTTCACACACC +
Preference number: 2 (lower is better)
Translates to: NTKSSNGHCQSTHIRPRIGTPYC*QDTSHT
Trigger: GGTGTGTGAAGTGTCCTGCCAACAATATGGAGTACC...AATCCTGGGCCTTATGTGTGTAGACTGGCAATGTCCATTTGAAGATTTTGTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR-3UTR CCA 90 bp AATACAAAATCTTCAAATGGACATTGCCAGTCTACACACATAAGGCCCAGGATTCTGCCTGCAGTGCTTTaGAAACCAAGGCAACATCAT +
Preference number: 2 (lower is better)
Translates to: NTKSSNGHCQSTHIRPRILPAVL*KPRQHH
Trigger: ATGATGTTGCCTTGGTTTCCAAAGCACTGCAGGCAG...AATCCTGGGCCTTATGTGTGTAGACTGGCAATGTCCATTTGAAGATTTTGTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR CAA 90 bp TTTGCAATGGTACAAAAGGGAGTCAGGGTAACTATTCGTGAAAGGTaGAAACTGCTCATTTTGATGCTAACACCAACCAGGTACTCCATA +
Preference number: 2 (lower is better)
Translates to: FAMVQKGVRVTIRER*KLLILMLTPTRYSI
Trigger: TATGGAGTACCTGGTTGGTGTTAGCATCAAAATGAGCAGTTTCAACCTTTCACGAATAGTTACCCTGACTCCCTTTTGTACCATTGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR-3UTR TCA 90 bp AATACAAAATCTTCAAATGGACATTGCCAGTCTACACACATAAGGCCCAGGATTTTCGAGTTTGGATGTTaGCAGAGAAAGGTTGCACTG +
Preference number: 2 (lower is better)
Translates to: NTKSSNGHCQSTHIRPRIFEFGC*QRKVAL
Trigger: CAGTGCAACCTTTCTCTGTCAACATCCAAACTCGAA...AATCCTGGGCCTTATGTGTGTAGACTGGCAATGTCCATTTGAAGATTTTGTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR-3UTR GCA 90 bp CTTCCATCATCTGTTCGAGTTTGGATGTTGACAGAGAAAGGTTGCACTGAAACGAATCATTCTCGATGTTaGTCTCTCAATTCCTTCTCT +
Preference number: 2 (lower is better)
Translates to: LPSSVRVWMLTEKGCTETNHSRC*SLNSFS
Trigger: AGAGAAGGAATTGAGAGAGCAACATCGAGAATGATT...CGTTTCAGTGCAACCTTTCTCTGTCAACATCCAAACTCGAACAGATGATGGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR-3UTR CCA 90 bp AACATGTCATTTCTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCCAGCCTTTGTCAGGCTaGCAACAAATACCACTTCTG +
Preference number: 2 (lower is better)
Translates to: NMSFLPLVTFLHSITWFTQPLSG*QQIPLL
Trigger: CAGAAGTGGTATTTGTTGCCAGCCTGACAAAGGCTG...GGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAGAAATGACATGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR-3UTR CCA 90 bp TGCCTGACAAACTTTCTGGCCAAAATGGAAGGCACTCTGAAGAAGCAATATAGTTCCAGTTCCAAATTCTaGCCAGCATCAACATCAAAA +
Preference number: 2 (lower is better)
Translates to: CLTNFLAKMEGTLKKQYSSSSKF*PASTSK
Trigger: TTTTGATGTTGATGCTGGCCAGAATTTGGAACTGGA...ACTATATTGCTTCTTCAGAGTGCCTTCCATTTTGGCCAGAAAGTTTGTCAGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR-3UTR CCA 90 bp ACTGTACTCATTAAATCTTGTGATGACACTCACATCAATGAAAGGCTTGGGCTCGAAAGCCCAAGACTGTaGAGAGACAAGGTTATTTCA +
Preference number: 2 (lower is better)
Translates to: TVLIKSCDDTHINERLGLESPRL*RDKVIS
Trigger: TGAAATAACCTTGTCTCTCCACAGTCTTGGGCTTTC...GAGCCCAAGCCTTTCATTGATGTGAGTGTCATCACAAGATTTAATGAGTACAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR-3UTR TCA 90 bp CTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCAAGAATGTTAACTCTCAATTCCTTCTCTaGGATCATCAAGGGTGCATG +
Preference number: 2 (lower is better)
Translates to: LPLVTFLHSITWFTKNVNSQFLL*DHQGCM
Trigger: CATGCACCCTTGATGATCTCAGAGAAGGAATTGAGA...GTTAACATTCTTGGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR-3UTR TCA 90 bp AATACAAAATCTTCAAATGGACATTGCCAGTCTACACACATAAGGCCCAGGATTAAGAAGGAGCTTTCTTaGCGGCTCAATATAGATAGG +
Preference number: 2 (lower is better)
Translates to: NTKSSNGHCQSTHIRPRIKKELS*RLNIDR
Trigger: CCTATCTATATTGAGCCGTCAAGAAAGCTCCTTCTT...AATCCTGGGCCTTATGTGTGTAGACTGGCAATGTCCATTTGAAGATTTTGTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR-3UTR TCA 90 bp TATGCTTTTCAACAGCAAGTTGACAGAATGAACTGCAAACATTTCCTGTTTTTCACTGCAACATGCATCTaGCTTCCCTGCTCCTATGAA +
Preference number: 2 (lower is better)
Translates to: YAFQQQVDRMNCKHFLFFTATCI*LPCSYE
Trigger: TTCATAGGAGCAGGGAAGTCAGATGCATGTTGCAGT...GAAAAACAGGAAATGTTTGCAGTTCATTCTGTCAACTTGCTGTTGAAAAGCATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR-3UTR GCA 90 bp CTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCAAGAATGTTAACTTGACAGAGAAAGGTTaGACTGAAACGAGGCTGTCA +
Preference number: 2 (lower is better)
Translates to: LPLVTFLHSITWFTKNVNLTEKG*TETRLS
Trigger: TGACAGCCTCGTTTCAGTGCAACCTTTCTCTGTCAA...GTTAACATTCTTGGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR-3UTR GCA 90 bp TCGTTTAATAGGGCTACGAATAGGGAGGCGCATTTCCATTGGATCTTTATCAAATGTTTTTGGAGACAATaGAGCCATGATTGTCAACAC +
Preference number: 2 (lower is better)
Translates to: SFNRATNREAHFHWIFIKCFWRQ*SHDCQH
Trigger: GTGTTGACAATCATGGCTGCATTGTCTCCAAAAACA...TTTGATAAAGATCCAATGGAAATGCGCCTCCCTATTCGTAGCCCTATTAAACGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR-3UTR TCA 90 bp AATACAAAATCTTCAAATGGACATTGCCAGTCTACACACATAAGGCCCAGGATTCAAGATAAAGCAGAGTaGCTTATAGACAAGACCAGT +
Preference number: 2 (lower is better)
Translates to: NTKSSNGHCQSTHIRPRIQDKAE*LIDKTS
Trigger: ACTGGTCTTGTCTATAAGTCACTCTGCTTTATCTTG...AATCCTGGGCCTTATGTGTGTAGACTGGCAATGTCCATTTGAAGATTTTGTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR-3UTR TCA 90 bp GATACCCCAAAGATTTTCCATTTCCTTAGACGTATCTTTGGATCCATCTTCTTTATTCTGAGTTTGAAGTaGCGTTTCTTCAAGGGTCTG +
Preference number: 2 (lower is better)
Translates to: DTPKIFHFLRRIFGSIFFILSLK*RFFKGL
Trigger: CAGACCCTTGAAGAAACGTCACTTCAAACTCAGAAT...AAAGAAGATGGATCCAAAGATACGTCTAAGGAAATGGAAAATCTTTGGGGTATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR-3UTR TCA 90 bp ACCATAATACACTTTAGAAAACTTGTCTTCAGCACTACTAAAAACCCACTACACATCCATGCCCACACTTaGCATCCACGACAAAAACTA +
Preference number: 2 (lower is better)
Translates to: TIIHFRKLVFSTTKNPLHIHAHT*HPRQKL
Trigger: TAGTTTTTGTCGTGGATGTCAAGTGTGGGCATGGAT...GTGTAGTGGGTTTTTAGTAGTGCTGAAGACAAGTTTTCTAAAGTGTATTATGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000645819.1
3UTR-3UTR TCA 90 bp GATACCCCAAAGATTTTCCATTTCCTTAGACGTATCTTTGGATCCATCTTCTTTACATTTTCTGGACTCTaGGGCACAGCTTTGATAAAG +
Preference number: 2 (lower is better)
Translates to: DTPKIFHFLRRIFGSIFFTFSGL*GTALIK
Trigger: CTTTATCAAAGCTGTGCCTCAGAGTCCAGAAAATGT...AAAGAAGATGGATCCAAAGATACGTCTAAGGAAATGGAAAATCTTTGGGGTATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR-3UTR TCA 90 bp ACTGTACTCATTAAATCTTGTGATGACACTCACATCAATGAAAGGCTTGGGCTCAATGTTCAATGCCTTTaGAGCTTTCCGTTATTTCTG +
Preference number: 2 (lower is better)
Translates to: TVLIKSCDDTHINERLGLNVQCL*SFPLFL
Trigger: CAGAAATAACGGAAAGCTTCAAAGGCATTGAACATT...GAGCCCAAGCCTTTCATTGATGTGAGTGTCATCACAAGATTTAATGAGTACAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR-3UTR TCA 90 bp AATACAAAATCTTCAAATGGACATTGCCAGTCTACACACATAAGGCCCAGGATTAAATGGAAGGCACTCTaGAGAAGCAATATAGTTCCA +
Preference number: 2 (lower is better)
Translates to: NTKSSNGHCQSTHIRPRIKWKAL*RSNIVP
Trigger: TGGAACTATATTGCTTCTTCAGAGTGCCTTCCATTT...AATCCTGGGCCTTATGTGTGTAGACTGGCAATGTCCATTTGAAGATTTTGTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR-3UTR GCA 90 bp TATGCTTTTCAACAGCAAGTTGACAGAATGAACTGCAAACATTTCCTGTTTTTCTCTACTGATGGACACTaGAACATGCATCTGACTTCC +
Preference number: 2 (lower is better)
Translates to: YAFQQQVDRMNCKHFLFFSTDGH*NMHLTS
Trigger: GGAAGTCAGATGCATGTTGCAGTGTCCATCAGTAGA...GAAAAACAGGAAATGTTTGCAGTTCATTCTGTCAACTTGCTGTTGAAAAGCATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR-3UTR GCA 90 bp TATGCTTTTCAACAGCAAGTTGACAGAATGAACTGCAAACATTTCCTGTTTTTCTCCATTTCTTCTGCCTaGAGTGCTTTGGAAACCAAG +
Preference number: 2 (lower is better)
Translates to: YAFQQQVDRMNCKHFLFFSISSA*SALETK
Trigger: CTTGGTTTCCAAAGCACTGCAGGCAGAAGAAATGGA...GAAAAACAGGAAATGTTTGCAGTTCATTCTGTCAACTTGCTGTTGAAAAGCATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR-3UTR CCA 90 bp AATACAAAATCTTCAAATGGACATTGCCAGTCTACACACATAAGGCCCAGGATTTCATCTGTTCGAGTTTaGATGTTGACAGAGAAAGGT +
Preference number: 2 (lower is better)
Translates to: NTKSSNGHCQSTHIRPRISSVRV*MLTEKG
Trigger: ACCTTTCTCTGTCAACATCCAAACTCGAACAGATGA...AATCCTGGGCCTTATGTGTGTAGACTGGCAATGTCCATTTGAAGATTTTGTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR CAA 90 bp TTATTTGTGCTTGACTCTCCTAGAAAACTGCATGTGGTGACATTTTaGCCAATGCTAAATTATCTAGGCACAAGAAAGGTTTGTCAGCTA +
Preference number: 2 (lower is better)
Translates to: LFVLDSPRKLHVVTF*PMLNYLGTRKVCQL
Trigger: TAGCTGACAAACCTTTCTTGTGCCTAGATAATTTAGCATTGGCAAAAATGTCACCACATGCAGTTTTCTAGGAGAGTCAAGCACAAATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000645819.1
ENST00000649766.1
3UTR CAA 90 bp ATTTTCACTGACACTAGGAGGAAATACAAAATCTTCAAATGGACATaGCCAGTCTACACACATAAGGCCCAGGATTTCAACTTCCTTTAT +
Preference number: 2 (lower is better)
Translates to: IFTDTRRKYKIFKWT*PVYTHKAQDFNFLY
Trigger: ATAAAGGAAGTTGAAATCCTGGGCCTTATGTGTGTAGACTGGCAATGTCCATTTGAAGATTTTGTATTTCCTCCTAGTGTCAGTGAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR-3UTR TCA 90 bp AATACAAAATCTTCAAATGGACATTGCCAGTCTACACACATAAGGCCCAGGATTTATATTTTGCTTTCCTaGAGCCCACGTACATTTTTC +
Preference number: 2 (lower is better)
Translates to: NTKSSNGHCQSTHIRPRIYILLS*SPRTFF
Trigger: GAAAAATGTACGTGGGCTTCAGGAAAGCAAAATATA...AATCCTGGGCCTTATGTGTGTAGACTGGCAATGTCCATTTGAAGATTTTGTATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR-3UTR CCA 90 bp TCGTTTAATAGGGCTACGAATAGGGAGGCGCATTTCCATTGGATCTTTATCAAAGAACTGTTGTTATCTTaGTCATTCTTTCTGTCAATC +
Preference number: 2 (lower is better)
Translates to: SFNRATNREAHFHWIFIKELLLS*SFFLSI
Trigger: GATTGACAGAAAGAATGACCAAGATAACAACAGTTC...TTTGATAAAGATCCAATGGAAATGCGCCTCCCTATTCGTAGCCCTATTAAACGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR-3UTR CCA 90 bp TCGTTTAATAGGGCTACGAATAGGGAGGCGCATTTCCATTGGATCTTTATCAAAAATAAAATCATCTCCTaGCAGCAAACTTTTATCCTG +
Preference number: 2 (lower is better)
Translates to: SFNRATNREAHFHWIFIKNKIIS*QQTFIL
Trigger: CAGGATAAAAGTTTGCTGCCAGGAGATGATTTTATT...TTTGATAAAGATCCAATGGAAATGCGCCTCCCTATTCGTAGCCCTATTAAACGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR-3UTR GCA 90 bp CTTGACATCCACGACAAAAACTACCAAGTCCTCTCATTAGTGTATAATCATTCTTGCCACACAGCAATTTaGCTAATTACATGTTCAACT +
Preference number: 2 (lower is better)
Translates to: LDIHDKNYQVLSLVYNHSCHTAI*LITCST
Trigger: AGTTGAACATGTAATTAGGCAAATTGCTGTGTGGCA...AGAATGATTATACACTAATGAGAGGACTTGGTAGTTTTTGTCGTGGATGTCAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000645819.1
ENST00000649766.1
3UTR-3UTR CCA 90 bp TATGCTTTTCAACAGCAAGTTGACAGAATGAACTGCAAACATTTCCTGTTTTTCTCAGAAATTCCACACTaGCACATACATACAGCTTGT +
Preference number: 2 (lower is better)
Translates to: YAFQQQVDRMNCKHFLFFSEIPH*HIHTAC
Trigger: ACAAGCTGTATGTATGTGCCAGTGTGGAATTTCTGA...GAAAAACAGGAAATGTTTGCAGTTCATTCTGTCAACTTGCTGTTGAAAAGCATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR-3UTR CCA 90 bp AATACAAAATCTTCAAATGGACATTGCCAGTCTACACACATAAGGCCCAGGATTTACTGGACCAGGCACTaGTTGAAATTTTTAATTGTA +
Preference number: 2 (lower is better)
Translates to: NTKSSNGHCQSTHIRPRIYWTRH*LKFLIV
Trigger: TACAATTAAAAATTTCAACCAGTGCCTGGTCCAGTA...AATCCTGGGCCTTATGTGTGTAGACTGGCAATGTCCATTTGAAGATTTTGTATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR TCA 72 bp CAGCACCATCCGGCTGCCAATTCTCCTGACGTGGACTaGCAGGTCGACTGTCGTCACTTCTGTGGAGTCAGA +
Preference number: 3 (lower is better)
Translates to: QHHPAANSPDVD*QVDCRHFCGVR
Trigger: TCTGACTCCACAGAAGTGACGACAGTCGACCTGTCAGTCCACGTCAGGAGAATTGGCAGCCGGATGGTGCTG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR CCA 72 bp ACAGACAGCACCATCCGGCTGCCAATTCTCCTGACGTaGACTGACAGGTCGACTGTCGTCACTTCTGTGGAG +
Preference number: 3 (lower is better)
Translates to: TDSTIRLPILLT*TDRSTVVTSVE
Trigger: CTCCACAGAAGTGACGACAGTCGACCTGTCAGTCCACGTCAGGAGAATTGGCAGCCGGATGGTGCTGTCTGT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR TCA 72 bp CAGGCGAGGGGGACGGAGGCTAGATACTTCCTCAGTTaGTTCTGCTGCCCTCTGAATGCCTTGGAAGGTACT +
Preference number: 3 (lower is better)
Translates to: QARGTEARYFLS*FCCPLNALEGT
Trigger: AGTACCTTCCAAGGCATTCAGAGGGCAGCAGAATCAACTGAGGAAGTATCTAGCCTCCGTCCCCCTCGCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR CCA 72 bp GAAGGTACTACTGGCCATATCTACGATTCCACCAGTTaGACGGGCCACAGCACCCACAAGCCCTTTTCCAAT +
Preference number: 3 (lower is better)
Translates to: EGTTGHIYDSTS*TGHSTHKPFSN
Trigger: ATTGGAAAAGGGCTTGTGGGTGCTGTGGCCCGTCCAACTGGTGGAATCGTAGATATGGCCAGTAGTACCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR CCA 72 bp ATTCTGCTGCCCTCTGAATGCCTTGGAAGGTACTACTaGCCATATCTACGATTCCACCAGTTGGACGGGCCA +
Preference number: 3 (lower is better)
Translates to: ILLPSECLGRYY*PYLRFHQLDGP
Trigger: TGGCCCGTCCAACTGGTGGAATCGTAGATATGGCCAGTAGTACCTTCCAAGGCATTCAGAGGGCAGCAGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR-3UTR CAA 90 bp TCGTTGACTGTGCATCCTCAATGGCATTACATGCTCTCTCTGCTGTGGCGGTGTGCAGCTCCTTCCTTTTaGGCACCTTCCACAGGTTTT +
Preference number: 3 (lower is better)
Translates to: SLTVHPQWHYMLSLLWRCAAPSF*APSTGF
Trigger: AAAACCTGTGGAAGGTGCCAAAAAGGAAGGAGCTGC...ACACCGCCACAGCAGAGAGAGCATGTAATGCCATTGAGGATGCACAGTCAACGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR TCA 72 bp CCTGCAGTGCTTTGGAAACCAAGGCAACATCATCGGTaGAAAGCAAAACTCTCTGGCGCCCATCCAGAAATG +
Preference number: 3 (lower is better)
Translates to: PAVLWKPRQHHR*KAKLSGAHPEM
Trigger: CATTTCTGGATGGGCGCCAGAGAGTTTTGCTTTTCACCGATGATGTTGCCTTGGTTTCCAAAGCACTGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR CCA 72 bp GAAGTGACGTTTCTTCAAGGGTCTGACCCATTTGGGTaGTGGCGTAGAAGTGGACTGCTAGCATATACATGG +
Preference number: 3 (lower is better)
Translates to: EVTFLQGSDPFG*WRRSGLLAYTW
Trigger: CCATGTATATGCTAGCAGTCCACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAACGTCACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
3UTR CCA 72 bp ATTTTTGCTGCTGTCTCGTTGACTGTGCATCCTCAATaGCATTACATGCTCTCTCTGCTGTGGCGGTGTCCT +
Preference number: 3 (lower is better)
Translates to: IFAAVSLTVHPQ*HYMLSLLWRCP
Trigger: AGGACACCGCCACAGCAGAGAGAGCATGTAATGCCATTGAGGATGCACAGTCAACGAGACAGCAGCAAAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR-3UTR CAA 90 bp CCGTCCAGGTCTGGCCACAGGGATATTTGCAACTTCTGTATATCCATGAGGTACTCATCTTTCTCTATCTaGACCTTCCCTGTGGCAGTC +
Preference number: 3 (lower is better)
Translates to: PSRSGHRDICNFCISMRYSSFSI*TFPVAV
Trigger: GACTGCCACAGGGAAGGTCAAGATAGAGAAAGATGA...GTACCTCATGGATATACAGAAGTTGCAAATATCCCTGTGGCCAGACCTGGACGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR-3UTR CAA 90 bp GCAAAACTCTCTGGCGCCCATCCAGAAATGATACCCAGTGTATCTGGATGTTTGCAGGAGCATCAGCCTTaGTCAGGCTGGCAACAAATA +
Preference number: 3 (lower is better)
Translates to: AKLSGAHPEMIPSVSGCLQEHQP*SGWQQI
Trigger: TATTTGTTGCCAGCCTGACAAAGGCTGATGCTCCTG...CAAACATCCAGATACACTGGGTATCATTTCTGGATGGGCGCCAGAGAGTTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR TCA 72 bp TGTTCGAGTTTGGATGTTGACAGAGAAAGGTTGCACTaGAACGAGGCTGTCAGAGCAGGAGCATCAGCCTTT +
Preference number: 3 (lower is better)
Translates to: CSSLDVDRERLH*NEAVRAGASAF
Trigger: AAAGGCTGATGCTCCTGCTCTGACAGCCTCGTTTCAGTGCAACCTTTCTCTGTCAACATCCAAACTCGAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR GCA 72 bp TCATCTGTTCGAGTTTGGATGTTGACAGAGAAAGGTTaGACTGAAACGAGGCTGTCAGAGCAGGAGCATCAG +
Preference number: 3 (lower is better)
Translates to: SSVRVWMLTEKG*TETRLSEQEHQ
Trigger: CTGATGCTCCTGCTCTGACAGCCTCGTTTCAGTGCAACCTTTCTCTGTCAACATCCAAACTCGAACAGATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR CCA 72 bp GTGACGTTTCTTCAAGGGTCTGACCCATTTGGGTGGTaGCGTAGAAGTGGACTGCTAGCATATACATGGTTA +
Preference number: 3 (lower is better)
Translates to: VTFLQGSDPFGW*RRSGLLAYTWL
Trigger: TAACCATGTATATGCTAGCAGTCCACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAACGTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
3UTR CCA 72 bp ACCAAGGCAACATCATCGGTGAAAAGCAAAACTCTCTaGCGCCCATCCAGAAATGATACCCAGTGTATCTGG +
Preference number: 3 (lower is better)
Translates to: TKATSSVKSKTL*RPSRNDTQCIW
Trigger: CCAGATACACTGGGTATCATTTCTGGATGGGCGCCAGAGAGTTTTGCTTTTCACCGATGATGTTGCCTTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR-3UTR CAA 90 bp TCGTTGACTGTGCATCCTCAATGGCATTACATGCTCTCTCTGCTGTGGCGGTGTATCATCTGTTCGAGTTaGGATGTTGACAGAGAAAGG +
Preference number: 3 (lower is better)
Translates to: SLTVHPQWHYMLSLLWRCIICSS*DVDRER
Trigger: CCTTTCTCTGTCAACATCCAAACTCGAACAGATGAT...ACACCGCCACAGCAGAGAGAGCATGTAATGCCATTGAGGATGCACAGTCAACGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR-3UTR CAA 90 bp GCCTGCAGTGCTTTGGAAACCAAGGCAACATCATCGGTGAAAAGCAAAACTCTCAGGTACTCCATATTGTaGGCAGGACACTTCACACAC +
Preference number: 3 (lower is better)
Translates to: ACSALETKATSSVKSKTLRYSIL*AGHFTH
Trigger: GTGTGTGAAGTGTCCTGCCAACAATATGGAGTACCT...GAGAGTTTTGCTTTTCACCGATGATGTTGCCTTGGTTTCCAAAGCACTGCAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR-3UTR CAA 90 bp GTCTCGTTGACTGTGCATCCTCAATGGCATTACATGCTCTCTCTGCTGTGGCGGAGTGTATCTGGATGTTaGCATCATATGGAAACTGTC +
Preference number: 3 (lower is better)
Translates to: VSLTVHPQWHYMLSLLWRSVSGC*HHMETV
Trigger: GACAGTTTCCATATGATGCAAACATCCAGATACACT...CCGCCACAGCAGAGAGAGCATGTAATGCCATTGAGGATGCACAGTCAACGAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR-3UTR CAA 90 bp ACTGTACTCATTAAATCTTGTGATGACACTCACATCAATGAAAGGCTTGGGCTCAAGGGTCTGACCCATTaGGGTGGTGGCGTAGAAGTG +
Preference number: 3 (lower is better)
Translates to: TVLIKSCDDTHINERLGLKGLTH*GGGVEV
Trigger: CACTTCTACGCCACCACCCAAATGGGTCAGACCCTT...GAGCCCAAGCCTTTCATTGATGTGAGTGTCATCACAAGATTTAATGAGTACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR-3UTR CAA 90 bp TCGTTGACTGTGCATCCTCAATGGCATTACATGCTCTCTCTGCTGTGGCGGTGTTGGATCCATCTTCTTTaGTTTTTGGAGACAATGCAG +
Preference number: 3 (lower is better)
Translates to: SLTVHPQWHYMLSLLWRCWIHLL*FLETMQ
Trigger: CTGCATTGTCTCCAAAAACAAAAGAAGATGGATCCA...ACACCGCCACAGCAGAGAGAGCATGTAATGCCATTGAGGATGCACAGTCAACGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR-3UTR CAA 90 bp CTCTCACACAAAGTTTGCCTGACAAACTTTCTGGCCAAAATGGAAGGCACTCTGACCAGGTACTCCATATaGTTGGCAGGACACTTCACA +
Preference number: 3 (lower is better)
Translates to: LSHKVCLTNFLAKMEGTLTRYSI*LAGHFT
Trigger: TGTGAAGTGTCCTGCCAACAATATGGAGTACCTGGT...CAGAGTGCCTTCCATTTTGGCCAGAAAGTTTGTCAGGCAAACTTTGTGTGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR-3UTR CAA 90 bp TCGTTGACTGTGCATCCTCAATGGCATTACATGCTCTCTCTGCTGTGGCGGTGTATACAACAGGGAACATaGCACCTGGTAACTGATTAT +
Preference number: 3 (lower is better)
Translates to: SLTVHPQWHYMLSLLWRCIQQGT*HLVTDY
Trigger: ATAATCAGTTACCAGGTGCAATGTTCCCTGTTGTAT...ACACCGCCACAGCAGAGAGAGCATGTAATGCCATTGAGGATGCACAGTCAACGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR GCA 72 bp ATACAATCGCCGTCCAGGTCTGGCCACAGGGATATTTaGAACTTCTGTATATCCATGAGGTACAATGGTCAG +
Preference number: 3 (lower is better)
Translates to: IQSPSRSGHRDI*NFCISMRYNGQ
Trigger: CTGACCATTGTACCTCATGGATATACAGAAGTTGCAAATATCCCTGTGGCCAGACCTGGACGGCGATTGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR GCA 72 bp AAGATCCTTCACAGCCCACCACTCTCACACAAAGTTTaGCTGACAAACTTTCTGGCCAAAATGGAAGGCACT +
Preference number: 3 (lower is better)
Translates to: KILHSPPLSHKV*LTNFLAKMEGT
Trigger: AGTGCCTTCCATTTTGGCCAGAAAGTTTGTCAGGCAAACTTTGTGTGAGAGTGGTGGGCTGTGAAGGATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR CCA 72 bp ATTCCATTGTCTCTTCCCCTCCACTCTCTCAATCAGTaGCTCCCAGACAGCATGGATCTCATTGTAATAGTG +
Preference number: 3 (lower is better)
Translates to: IPLSLPLHSLNQ*LPDSMDLIVIV
Trigger: CACTATTACAATGAGATCCATGCTGTCTGGGAGCCACTGATTGAGAGAGTGGAGGGGAAGAGACAATGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR CCA 72 bp CTCTGGCGCCCATCCAGAAATGATACCCAGTGTATCTaGATGTTTGCATCATATGGAAACTGTCCACATCCA +
Preference number: 3 (lower is better)
Translates to: LWRPSRNDTQCI*MFASYGNCPHP
Trigger: TGGATGTGGACAGTTTCCATATGATGCAAACATCCAGATACACTGGGTATCATTTCTGGATGGGCGCCAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR-3UTR CAA 90 bp GCAAAACTCTCTGGCGCCCATCCAGAAATGATACCCAGTGTATCTGGATGTTTGCAATCATTCTCGATGTaGCTCTCTCAATTCCTTCTC +
Preference number: 3 (lower is better)
Translates to: AKLSGAHPEMIPSVSGCLQSFSM*LSQFLL
Trigger: GAGAAGGAATTGAGAGAGCAACATCGAGAATGATTG...CAAACATCCAGATACACTGGGTATCATTTCTGGATGGGCGCCAGAGAGTTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR-3UTR CAA 90 bp CTCTCACACAAAGTTTGCCTGACAAACTTTCTGGCCAAAATGGAAGGCACTCTGGTTCGAGTTTGGATGTaGACAGAGAAAGGTTGCACT +
Preference number: 3 (lower is better)
Translates to: LSHKVCLTNFLAKMEGTLVRVWM*TEKGCT
Trigger: AGTGCAACCTTTCTCTGTCAACATCCAAACTCGAAC...CAGAGTGCCTTCCATTTTGGCCAGAAAGTTTGTCAGGCAAACTTTGTGTGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR-3UTR CAA 90 bp GCCTGCAGTGCTTTGGAAACCAAGGCAACATCATCGGTGAAAAGCAAAACTCTCTGGCCACAGGGATATTaGCAACTTCTGTATATCCAT +
Preference number: 3 (lower is better)
Translates to: ACSALETKATSSVKSKTLWPQGY*QLLYIH
Trigger: ATGGATATACAGAAGTTGCAAATATCCCTGTGGCCA...GAGAGTTTTGCTTTTCACCGATGATGTTGCCTTGGTTTCCAAAGCACTGCAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR TCA 72 bp GGTGAAAAGCAAAACTCTCTGGCGCCCATCCAGAAATaGTACCCAGTGTATCTGGATGTTTGCATCATATGG +
Preference number: 3 (lower is better)
Translates to: GEKQNSLAPIQK*YPVYLDVCIIW
Trigger: CCATATGATGCAAACATCCAGATACACTGGGTATCATTTCTGGATGGGCGCCAGAGAGTTTTGCTTTTCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR GCA 72 bp CTGAGAAGTCTCACTGATGACTGCTTCATCAATTTTTaGTGCTGTCTCGTTGACTGTGCATCCTCAATGGCA +
Preference number: 3 (lower is better)
Translates to: LRSLTDDCFINF*CCLVDCASSMA
Trigger: TGCCATTGAGGATGCACAGTCAACGAGACAGCAGCAAAAATTGATGAAGCAGTCATCAGTGAGACTTCTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR GCA 72 bp GATGGCAATTGGGGTCTGAGAAGTCTCACTGATGACTaGTTCATCAATTTTTGCTGCTGTCTCGTTGACTGT +
Preference number: 3 (lower is better)
Translates to: DGNWGLRSLTDD*FINFCCCLVDC
Trigger: ACAGTCAACGAGACAGCAGCAAAAATTGATGAAGCAGTCATCAGTGAGACTTCTCAGACCCCAATTGCCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR CCA 72 bp TGGGATTCCGTACATTATACAATCGCCGTCCAGGTCTaGCCACAGGGATATTTGCAACTTCTGTATATCCAT +
Preference number: 3 (lower is better)
Translates to: WDSVHYTIAVQV*PQGYLQLLYIH
Trigger: ATGGATATACAGAAGTTGCAAATATCCCTGTGGCCAGACCTGGACGGCGATTGTATAATGTACGGAATCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR CCA 72 bp CAATTTGTACCAAGACAGAGTCAGAATGACTGGCATTaGGATTCCGTACATTATACAATCGCCGTCCAGGTC +
Preference number: 3 (lower is better)
Translates to: QFVPRQSQNDWH*DSVHYTIAVQV
Trigger: GACCTGGACGGCGATTGTATAATGTACGGAATCCCAATGCCAGTCATTCTGACTCTGTCTTGGTACAAATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR-3UTR CAA 90 bp AACATGTCATTTCTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCAAGGGTCTGACCCATTaGGGTGGTGGCGTAGAAGTG +
Preference number: 3 (lower is better)
Translates to: NMSFLPLVTFLHSITWFTKGLTH*GGGVEV
Trigger: CACTTCTACGCCACCACCCAAATGGGTCAGACCCTT...GGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAGAAATGACATGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
3UTR-3UTR CAA 90 bp GCAAAACTCTCTGGCGCCCATCCAGAAATGATACCCAGTGTATCTGGATGTTTGCTAATGATGACTTGTTaGCAATGGTACAAAAGGGAG +
Preference number: 3 (lower is better)
Translates to: AKLSGAHPEMIPSVSGCLLMMTC*QWYKRE
Trigger: CTCCCTTTTGTACCATTGCAAACAAGTCATCATTAG...CAAACATCCAGATACACTGGGTATCATTTCTGGATGGGCGCCAGAGAGTTTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR TCA 72 bp CCCCTGAGGTCTGTGATTAAGATGGCAATTGGGGTCTaGGAAGTCTCACTGATGACTGCTTCATCAATTTTT +
Preference number: 3 (lower is better)
Translates to: PLRSVIKMAIGV*EVSLMTASSIF
Trigger: AAAAATTGATGAAGCAGTCATCAGTGAGACTTCTCAGACCCCAATTGCCATCTTAATCACAGACCTCAGGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR GCA 72 bp TTCTGGACTCTGAGGCACAGCTTTGATAAAGAAATCTaGCACAGTCATCAGAAATTCCACACTGGCACATAC +
Preference number: 3 (lower is better)
Translates to: FWTLRHSFDKEI*HSHQKFHTGTY
Trigger: GTATGTGCCAGTGTGGAATTTCTGATGACTGTGGCAGATTTCTTTATCAAAGCTGTGCCTCAGAGTCCAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR TCA 72 bp AGGAATCCACAAAGAACTGGGATCTCATCTTCAGAATaGGTCTCAGAGAGGAGTGCAGATTTCACAGCAATA +
Preference number: 3 (lower is better)
Translates to: RNPQRTGISSSE*VSERSADFTAI
Trigger: TATTGCTGTGAAATCTGCACTCCTCTCTGAGACTCATTCTGAAGATGAGATCCCAGTTCTTTGTGGATTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000645819.1
ENST00000650094.1
3UTR TCA 72 bp CCTGAAATCAGCTGGATGTTTCACATGAATATCTTCTaGACGATACTGGAGAACCCGGGTAGTCTTGTTGAT +
Preference number: 3 (lower is better)
Translates to: PEISWMFHMNIF*TILENPGSLVD
Trigger: ATCAACAAGACTACCCGGGTTCTCCAGTATCGTTCAGAAGATATTCATGTGAAACATCCAGCTGATTTCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR TCA 72 bp CAGGTGCAGATCCCTCATGGTAATCAGAAAAAGTTATaGCAGTTGAATGTTCGGCAGTGTTTACATCCACCA +
Preference number: 3 (lower is better)
Translates to: QVQIPHGNQKKL*QLNVRQCLHPP
Trigger: TGGTGGATGTAAACACTGCCGAACATTCAACTGTCATAACTTTTTCTGATTACCATGAGGGATCTGCACCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR GCA 72 bp GATGTCCCATGGTGTATGGTTCATTATCAAGGCAGGTaGAGATCCCTCATGGTAATCAGAAAAAGTTATGAC +
Preference number: 3 (lower is better)
Translates to: DVPWCMVHYQGR*RSLMVIRKSYD
Trigger: GTCATAACTTTTTCTGATTACCATGAGGGATCTGCACCTGCCTTGATAATGAACCATACACCATGGGACATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR GCA 72 bp AGAAGTCTCACTGATGACTGCTTCATCAATTTTTGCTaGTGTCTCGTTGACTGTGCATCCTCAATGGCATTA +
Preference number: 3 (lower is better)
Translates to: RSLTDDCFINFC*CLVDCASSMAL
Trigger: TAATGCCATTGAGGATGCACAGTCAACGAGACAGCAGCAAAAATTGATGAAGCAGTCATCAGTGAGACTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR CCA 72 bp TTGCATCAATTTGTACCAAGACAGAGTCAGAATGACTaGCATTGGGATTCCGTACATTATACAATCGCCGTC +
Preference number: 3 (lower is better)
Translates to: LHQFVPRQSQND*HWDSVHYTIAV
Trigger: GACGGCGATTGTATAATGTACGGAATCCCAATGCCAGTCATTCTGACTCTGTCTTGGTACAAATTGATGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR TCA 72 bp TCAGTTGCATCAATTTGTACCAAGACAGAGTCAGAATaGCTGGCATTGGGATTCCGTACATTATACAATCGC +
Preference number: 3 (lower is better)
Translates to: SVASICTKTESE*LALGFRTLYNR
Trigger: GCGATTGTATAATGTACGGAATCCCAATGCCAGTCATTCTGACTCTGTCTTGGTACAAATTGATGCAACTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR TCA 72 bp TGCAATGGTACAAAAGGGAGTCAGGGTAACTATTCGTaGAAGGTTGAAACTGCTCATTTTGATGCTAACACC +
Preference number: 3 (lower is better)
Translates to: CNGTKGSQGNYS*KVETAHFDANT
Trigger: GGTGTTAGCATCAAAATGAGCAGTTTCAACCTTTCACGAATAGTTACCCTGACTCCCTTTTGTACCATTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR TCA 72 bp ATAGGAAACTTCCTGCTTGCTTTCATTGTTAACCAGTaGAAGCCCAAGACTGTGGAGAGACAAGGTTATTTC +
Preference number: 3 (lower is better)
Translates to: IGNFLLAFIVNQ*KPKTVERQGYF
Trigger: GAAATAACCTTGTCTCTCCACAGTCTTGGGCTTTCACTGGTTAACAATGAAAGCAAGCAGGAAGTTTCCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR CCA 72 bp TCACGTATGCGGAAATGTCCATTCCAGTTTTTGCCCTaGTATTTCACCAGGACTAATTCCATTATTTCACCA +
Preference number: 3 (lower is better)
Translates to: SRMRKCPFQFLP*YFTRTNSIISP
Trigger: TGGTGAAATAATGGAATTAGTCCTGGTGAAATACCAGGGCAAAAACTGGAATGGACATTTCCGCATACGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR CCA 72 bp TTCACTGACACTAGGAGGAAATACAAAATCTTCAAATaGACATTGCCAGTCTACACACATAAGGCCCAGGAT +
Preference number: 3 (lower is better)
Translates to: FTDTRRKYKIFK*TLPVYTHKAQD
Trigger: ATCCTGGGCCTTATGTGTGTAGACTGGCAATGTCCATTTGAAGATTTTGTATTTCCTCCTAGTGTCAGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR-3UTR CAA 90 bp ACTGTACTCATTAAATCTTGTGATGACACTCACATCAATGAAAGGCTTGGGCTCATGGAGAAATGGTTTTaGATCTGTAGAGGAGAGCGA +
Preference number: 3 (lower is better)
Translates to: TVLIKSCDDTHINERLGLMEKWF*ICRGER
Trigger: TCGCTCTCCTCTACAGATCAAAAACCATTTCTCCAT...GAGCCCAAGCCTTTCATTGATGTGAGTGTCATCACAAGATTTAATGAGTACAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR-3UTR CAA 90 bp TCGTTTAATAGGGCTACGAATAGGGAGGCGCATTTCCATTGGATCTTTATCAAATTCAGTTGCATCAATTaGTACCAAGACAGAGTCAGA +
Preference number: 3 (lower is better)
Translates to: SFNRATNREAHFHWIFIKFSCIN*YQDRVR
Trigger: TCTGACTCTGTCTTGGTACAAATTGATGCAACTGAA...TTTGATAAAGATCCAATGGAAATGCGCCTCCCTATTCGTAGCCCTATTAAACGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR-3UTR CAA 90 bp AATACAAAATCTTCAAATGGACATTGCCAGTCTACACACATAAGGCCCAGGATTTTGAAACTGCTCATTTaGATGCTAACACCAACCAGG +
Preference number: 3 (lower is better)
Translates to: NTKSSNGHCQSTHIRPRILKLLI*MLTPTR
Trigger: CCTGGTTGGTGTTAGCATCAAAATGAGCAGTTTCAA...AATCCTGGGCCTTATGTGTGTAGACTGGCAATGTCCATTTGAAGATTTTGTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR TCA 72 bp ACAGTTCGATGTCCAAGGCCACATTCTAAGGTAACTTaGATGGATTCTACAACAACACCACAATTTTCCTCT +
Preference number: 3 (lower is better)
Translates to: TVRCPRPHSKVT*MDSTTTPQFSS
Trigger: AGAGGAAAATTGTGGTGTTGTTGTAGAATCCATTCAAGTTACCTTAGAATGTGGCCTTGGACATCGAACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR TCA 72 bp AGATCCCTCATGGTAATCAGAAAAAGTTATGACAGTTaGATGTTCGGCAGTGTTTACATCCACCAAGATACC +
Preference number: 3 (lower is better)
Translates to: RSLMVIRKSYDS*MFGSVYIHQDT
Trigger: GGTATCTTGGTGGATGTAAACACTGCCGAACATTCAACTGTCATAACTTTTTCTGATTACCATGAGGGATCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR GCA 72 bp AGGAGAGCGAAGGGTAATTACTTTATTCCCTTCAGTTaGATCAATTTGTACCAAGACAGAGTCAGAATGACT +
Preference number: 3 (lower is better)
Translates to: RRAKGNYFIPFS*INLYQDRVRMT
Trigger: AGTCATTCTGACTCTGTCTTGGTACAAATTGATGCAACTGAAGGGAATAAAGTAATTACCCTTCGCTCTCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR GCA 72 bp GTGTATCACGTATGCGGAAATGTCCATTCCAGTTTTTaGCCTGGTATTTCACCAGGACTAATTCCATTATTT +
Preference number: 3 (lower is better)
Translates to: VYHVCGNVHSSF*PGISPGLIPLF
Trigger: AAATAATGGAATTAGTCCTGGTGAAATACCAGGGCAAAAACTGGAATGGACATTTCCGCATACGTGATACAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR GCA 72 bp ACACTAGGAGGAAATACAAAATCTTCAAATGGACATTaGCAGTCTACACACATAAGGCCCAGGATTTCAACT +
Preference number: 3 (lower is better)
Translates to: TLGGNTKSSNGH*QSTHIRPRIST
Trigger: AGTTGAAATCCTGGGCCTTATGTGTGTAGACTGGCAATGTCCATTTGAAGATTTTGTATTTCCTCCTAGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR CCA 72 bp ACCCATAACTTCCCACTGTATCCAATGAGAAACTACTaGACCAGGCACTGGTTGAAATTTTTAATTGTACCT +
Preference number: 3 (lower is better)
Translates to: THNFPLYPMRNY*TRHWLKFLIVP
Trigger: AGGTACAATTAAAAATTTCAACCAGTGCCTGGTCCAGTAGTTTCTCATTGGATACAGTGGGAAGTTATGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR-3UTR CAA 90 bp TCGTTTAATAGGGCTACGAATAGGGAGGCGCATTTCCATTGGATCTTTATCAAAGAATGTTCAATGCCTTaGAAGCTTTCCGTTATTTCT +
Preference number: 3 (lower is better)
Translates to: SFNRATNREAHFHWIFIKECSMP*KLSVIS
Trigger: AGAAATAACGGAAAGCTTCAAAGGCATTGAACATTC...TTTGATAAAGATCCAATGGAAATGCGCCTCCCTATTCGTAGCCCTATTAAACGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR-3UTR CAA 90 bp AATACAAAATCTTCAAATGGACATTGCCAGTCTACACACATAAGGCCCAGGATTCTTGTTGGATTAACTTaGTCCGTCTTCTTTCAGCTT +
Preference number: 3 (lower is better)
Translates to: NTKSSNGHCQSTHIRPRILVGLT*SVFFQL
Trigger: AAGCTGAAAGAAGACGGACAAAGTTAATCCAACAAG...AATCCTGGGCCTTATGTGTGTAGACTGGCAATGTCCATTTGAAGATTTTGTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR TCA 72 bp TGTAGTCTGAGTTCACCAAGTTGGAAACTGTCATTATaGAATGCAACTCCAGATTCCTGGTTGATATCATTG +
Preference number: 3 (lower is better)
Translates to: CSLSSPSWKLSL*NATPDSWLISL
Trigger: CAATGATATCAACCAGGAATCTGGAGTTGCATTTCATAATGACAGTTTCCAACTTGGTGAACTCAGACTACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR TCA 72 bp AAAATAATATCCCTGAAATCAGCTGGATGTTTCACATaGATATCTTCTGAACGATACTGGAGAACCCGGGTA +
Preference number: 3 (lower is better)
Translates to: KIISLKSAGCFT*ISSERYWRTRV
Trigger: TACCCGGGTTCTCCAGTATCGTTCAGAAGATATTCATGTGAAACATCCAGCTGATTTCAGGGATATTATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR GCA 72 bp ATGTTCAATGCCTTTGAAGCTTTCCGTTATTTCTGTTaGCGTGTCAACACCAAGAAACCAAGTGTTATAATC +
Preference number: 3 (lower is better)
Translates to: MFNAFEAFRYFC*RVNTKKPSVII
Trigger: GATTATAACACTTGGTTTCTTGGTGTTGACACGGCAACAGAAATAACGGAAAGCTTCAAAGGCATTGAACAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR CCA 72 bp TTTAATAGGGCTACGAATAGGGAGGCGCATTTCCATTaGATCTTTATCAAAATTGACCTGGTTATCCCAATA +
Preference number: 3 (lower is better)
Translates to: FNRATNREAHFH*IFIKIDLVIPI
Trigger: TATTGGGATAACCAGGTCAATTTTGATAAAGATCCAATGGAAATGCGCCTCCCTATTCGTAGCCCTATTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR TCA 72 bp AATAGCCTAAATATTTCAATTATCCATGCCCACACTTaGCATCCACGACAAAAACTACCAAGTCCTCTCATT +
Preference number: 3 (lower is better)
Translates to: NSLNISIIHAHT*HPRQKLPSPLI
Trigger: AATGAGAGGACTTGGTAGTTTTTGTCGTGGATGTCAAGTGTGGGCATGGATAATTGAAATATTTAGGCTATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000645819.1
ENST00000649766.1
3UTR TCA 72 bp GGATTCTACAACAACACCACAATTTTCCTCTATCAGTaGATGTTCAATGCCTTTGAAGCTTTCCGTTATTTC +
Preference number: 3 (lower is better)
Translates to: GFYNNTTIFLYQ*MFNAFEAFRYF
Trigger: GAAATAACGGAAAGCTTCAAAGGCATTGAACATTCACTGATAGAGGAAAATTGTGGTGTTGTTGTAGAATCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR TCA 72 bp GGAATAAAATCATCTCCTGGCAGCAAACTTTTATCCTaGACTGGGTTCTTCTTTACATCAAGCCTTAAATTC +
Preference number: 3 (lower is better)
Translates to: GIKSSPGSKLLS*TGFFFTSSLKF
Trigger: GAATTTAAGGCTTGATGTAAAGAAGAACCCAGTTCAGGATAAAAGTTTGCTGCCAGGAGATGATTTTATTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR-3UTR CAA 90 bp AACATGTCATTTCTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCTCTGAGTTCACCAAGTaGGAAACTGTCATTATGAAA +
Preference number: 3 (lower is better)
Translates to: NMSFLPLVTFLHSITWFTSEFTK*ETVIMK
Trigger: TTTCATAATGACAGTTTCCAACTTGGTGAACTCAGA...GGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAGAAATGACATGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR-3UTR CAA 90 bp ACCATAATACACTTTAGAAAACTTGTCTTCAGCACTACTAAAAACCCACTACACATTAGTTATTTGTGCTaGACTCTCCTAGAAAACTGC +
Preference number: 3 (lower is better)
Translates to: TIIHFRKLVFSTTKNPLHISYLC*TLLENC
Trigger: GCAGTTTTCTAGGAGAGTCAAGCACAAATAACTAAT...GTGTAGTGGGTTTTTAGTAGTGCTGAAGACAAGTTTTCTAAAGTGTATTATGGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR TCA 90 bp CCTGAATTGATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATACCGCCCGGCGCAGCTaGGGGCTGCGACCAGCGCTG +
Preference number: 4 (lower is better)
Translates to: PELILTGPAPSQNTVSLYTARRS*GLRPAL
Trigger: CAGCGCTGGTCGCAGCCCTCAGCTGCGCCGGGCGGT...ATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATCAATTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp TTTGAAGTGACGTTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGACCAGCGCTGCAAATaGCAGCCCCTCCGGCGCAGG +
Preference number: 4 (lower is better)
Translates to: FEVTFLQGSDPFGWWRRSDQRCK*QPLRRR
Trigger: CCTGCGCCGGAGGGGCTGTCATTTGCAGCGCTGGTC...ACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAACGTCACTTCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249837.7
CDS-3UTR GCA 90 bp TTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGGACTGCTAGCATGTGGCAGCCCTTTCTaGAGCCTGGGCAGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: FLQGSDPFGWWRRSGLLACGSPF*SLGSGS
Trigger: GCTGCCACTGCCCAGGCTGCAGAAAGGGCTGCCACA...TGCTAGCAGTCCACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp GTCTCGTTGACTGTGCATCCTCAATGGCATTACATGCTCTCTCTGCTGTGGCGGTCTCCTGACGTGGACTaGCAGGTCGACTGTCGTCAC +
Preference number: 4 (lower is better)
Translates to: VSLTVHPQWHYMLSLLWRSPDVD*QVDCRH
Trigger: GTGACGACAGTCGACCTGTCAGTCCACGTCAGGAGA...CCGCCACAGCAGAGAGAGCATGTAATGCCATTGAGGATGCACAGTCAACGAGAC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR TCA 90 bp GATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATATGCCTTAGCACCATGGTGGCGCTaGGGCACAAGGAGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: DSHRACSLTEHSVIIYALAPWWR*GTRRGR
Trigger: CCTCCCTCTCCTTGTGCCTCAGCGCCACCATGGTGC...TAAGGCATATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp TTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGGACTGCTAGCAGGCTGCCAATTCTCCTaGCGTGGACTGACAGGTCGA +
Preference number: 4 (lower is better)
Translates to: FLQGSDPFGWWRRSGLLAGCQFS*RGLTGR
Trigger: TCGACCTGTCAGTCCACGTCAGGAGAATTGGCAGCC...TGCTAGCAGTCCACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR GCA 90 bp TTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGGACTGCTAGCACCAAGATCGCACCACTaGATTCCAGCCTGGGCGACA +
Preference number: 4 (lower is better)
Translates to: FLQGSDPFGWWRRSGLLAPRSHH*IPAWAT
Trigger: TGTCGCCCAGGCTGGAATGCAGTGGTGCGATCTTGG...TGCTAGCAGTCCACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
3UTR CAA 72 bp GGAAGGTACTACTGGCCATATCTACGATTCCACCAGTaGGACGGGCCACAGCACCCACAAGCCCTTTTCCAA +
Preference number: 4 (lower is better)
Translates to: GRYYWPYLRFHQ*DGPQHPQALFQ
Trigger: TTGGAAAAGGGCTTGTGGGTGCTGTGGCCCGTCCAACTGGTGGAATCGTAGATATGGCCAGTAGTACCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR TCA 90 bp CTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCAAGAATGTTAACACCGCCCGGCGCAGCTaGGGGCTGCGACCAGCGCTG +
Preference number: 4 (lower is better)
Translates to: LPLVTFLHSITWFTKNVNTARRS*GLRPAL
Trigger: CAGCGCTGGTCGCAGCCCTCAGCTGCGCCGGGCGGT...GTTAACATTCTTGGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGACCGCCCGGCGCAGCTaGGGGCTGCGACCAGCGCTG +
Preference number: 4 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRTARRS*GLRPAL
Trigger: CAGCGCTGGTCGCAGCCCTCAGCTGCGCCGGGCGGT...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR TCA 90 bp TTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGGACTGCTAGCAAGGCAGAGATTGCAGTaGGCCAAGATCGCACCACTG +
Preference number: 4 (lower is better)
Translates to: FLQGSDPFGWWRRSGLLARQRLQ*AKIAPL
Trigger: CAGTGGTGCGATCTTGGCTCACTGCAATCTCTGCCT...TGCTAGCAGTCCACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR GCA 90 bp CCGTCCAGGTCTGGCCACAGGGATATTTGCAACTTCTGTATATCCATGAGGTACCCAAGATCGCACCACTaGATTCCAGCCTGGGCGACA +
Preference number: 4 (lower is better)
Translates to: PSRSGHRDICNFCISMRYPRSHH*IPAWAT
Trigger: TGTCGCCCAGGCTGGAATGCAGTGGTGCGATCTTGG...GTACCTCATGGATATACAGAAGTTGCAAATATCCCTGTGGCCAGACCTGGACGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR TCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTACCGCCCGGCGCAGCTaGGGGCTGCGACCAGCGCTG +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFTARRS*GLRPAL
Trigger: CAGCGCTGGTCGCAGCCCTCAGCTGCGCCGGGCGGT...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR TCA 90 bp TTTGAAGTGACGTTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGGCTGCCAATTCTCCTaGCGTGGACTGACAGGTCGA +
Preference number: 4 (lower is better)
Translates to: FEVTFLQGSDPFGWWRRSGCQFS*RGLTGR
Trigger: TCGACCTGTCAGTCCACGTCAGGAGAATTGGCAGCC...ACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAACGTCACTTCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR TCA 90 bp CACTCTCTCAATCAGTGGCTCCCAGACAGCATGGATCTCATTGTAATAGTGCACGGCTGCCAATTCTCCTaGCGTGGACTGACAGGTCGA +
Preference number: 4 (lower is better)
Translates to: HSLNQWLPDSMDLIVIVHGCQFS*RGLTGR
Trigger: TCGACCTGTCAGTCCACGTCAGGAGAATTGGCAGCC...GTGCACTATTACAATGAGATCCATGCTGTCTGGGAGCCACTGATTGAGAGAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR GCA 90 bp TTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGGACTGCTAGCAGGTACCAGTAGGATCTaGCCAGGCAAAAAGTCGAGC +
Preference number: 4 (lower is better)
Translates to: FLQGSDPFGWWRRSGLLAGTSRI*PGKKSS
Trigger: GCTCGACTTTTTGCCTGGGCAGATCCTACTGGTACC...TGCTAGCAGTCCACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CCA 90 bp TTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGGACTGCTAGCAGGACTCCCCCACAAGTaGTTTCAGCTCGGATTCCTT +
Preference number: 4 (lower is better)
Translates to: FLQGSDPFGWWRRSGLLAGLPHK*FQLGFL
Trigger: AAGGAATCCGAGCTGAAACCACTTGTGGGGGAGTCC...TGCTAGCAGTCCACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CCA 90 bp TTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGGACTGCTAGCACCAATTCTCCTGACGTaGACTGACAGGTCGACTGTC +
Preference number: 4 (lower is better)
Translates to: FLQGSDPFGWWRRSGLLAPILLT*TDRSTV
Trigger: GACAGTCGACCTGTCAGTCCACGTCAGGAGAATTGG...TGCTAGCAGTCCACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CCA 90 bp TTTGAAGTGACGTTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTTACGATTCCACCAGTTaGACGGGCCACAGCACCCAC +
Preference number: 4 (lower is better)
Translates to: FEVTFLQGSDPFGWWRRSYDSTS*TGHSTH
Trigger: GTGGGTGCTGTGGCCCGTCCAACTGGTGGAATCGTA...ACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAACGTCACTTCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CCA 90 bp TTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGGACTGCTAGCAGACCCATTTGGGTGGTaGCGTAGAAGTGGACTGCTA +
Preference number: 4 (lower is better)
Translates to: FLQGSDPFGWWRRSGLLADPFGW*RRSGLL
Trigger: TAGCAGTCCACTTCTACGCCACCACCCAAATGGGTC...TGCTAGCAGTCCACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CCA 90 bp TCGTTGACTGTGCATCCTCAATGGCATTACATGCTCTCTCTGCTGTGGCGGTGTGACCCATTTGGGTGGTaGCGTAGAAGTGGACTGCTA +
Preference number: 4 (lower is better)
Translates to: SLTVHPQWHYMLSLLWRCDPFGW*RRSGLL
Trigger: TAGCAGTCCACTTCTACGCCACCACCCAAATGGGTC...ACACCGCCACAGCAGAGAGAGCATGTAATGCCATTGAGGATGCACAGTCAACGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR TCA 90 bp GTCTCGTTGACTGTGCATCCTCAATGGCATTACATGCTCTCTCTGCTGTGGCGGTGCTGGATACAGCTTTaGCAGCGATACTTCTGGACT +
Preference number: 4 (lower is better)
Translates to: VSLTVHPQWHYMLSLLWRCWIQL*QRYFWT
Trigger: AGTCCAGAAGTATCGCTGTCAAAGCTGTATCCAGCA...CCGCCACAGCAGAGAGAGCATGTAATGCCATTGAGGATGCACAGTCAACGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR TCA 90 bp TTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGGACTGCTAGCATCCCTCTCTTTTCTCTaGGAAAAGGGCAAGCGAGCA +
Preference number: 4 (lower is better)
Translates to: FLQGSDPFGWWRRSGLLASLSFL*EKGKRA
Trigger: TGCTCGCTTGCCCTTTTCTCAGAGAAAAGAGAGGGA...TGCTAGCAGTCCACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR TCA 90 bp TTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGGACTGCTAGCAGCGCCCATCCAGAAATaGTACCCAGTGTATCTGGAT +
Preference number: 4 (lower is better)
Translates to: FLQGSDPFGWWRRSGLLAAPIQK*YPVYLD
Trigger: ATCCAGATACACTGGGTATCATTTCTGGATGGGCGC...TGCTAGCAGTCCACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR TCA 90 bp GTCTCGTTGACTGTGCATCCTCAATGGCATTACATGCTCTCTCTGCTGTGGCGGAGGCAACATCATCGGTaGAAAGCAAAACTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: VSLTVHPQWHYMLSLLWRRQHHR*KAKLSG
Trigger: GCCAGAGAGTTTTGCTTTTCACCGATGATGTTGCCT...CCGCCACAGCAGAGAGAGCATGTAATGCCATTGAGGATGCACAGTCAACGAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR TCA 90 bp TCTCTGAGAAAAGGGCAAGCGAGCACTTTCAGATCTCTCACAGAAGCTTCCATCAGGCAGAGATTGCAGTaGGCCAAGATCGCACCACTG +
Preference number: 4 (lower is better)
Translates to: SLRKGQASTFRSLTEASIRQRLQ*AKIAPL
Trigger: CAGTGGTGCGATCTTGGCTCACTGCAATCTCTGCCT...GATGGAAGCTTCTGTGAGAGATCTGAAAGTGCTCGCTTGCCCTTTTCTCAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR GCA 90 bp CCTGAATTGATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATCATTTCCGCCCCAGATaGCCAGCTTCAGCTGGGACT +
Preference number: 4 (lower is better)
Translates to: PELILTGPAPSQNTVSLYHFRPR*PASAGT
Trigger: AGTCCCAGCTGAAGCTGGGCATCTGGGGCGGAAATG...ATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATCAATTCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR GCA 90 bp TTTGAAGTGACGTTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGGAAGCAGCTCTTTCTaGAGCCTGGACTGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: FEVTFLQGSDPFGWWRRSGSSSF*SLDCGC
Trigger: ACAGCCACAGTCCAGGCTGCAGAAAGAGCTGCTTCC...ACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAACGTCACTTCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CCA 90 bp TTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGGACTGCTAGCATGTCTCTCTGGAGACTaGGCTGATGATTTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: FLQGSDPFGWWRRSGLLACLSGD*ADDFCG
Trigger: GCCACAGAAATCATCAGCCCAGTCTCCAGAGAGACA...TGCTAGCAGTCCACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CCA 90 bp CCGTCCAGGTCTGGCCACAGGGATATTTGCAACTTCTGTATATCCATGAGGTACGGACTCCCCCACAAGTaGTTTCAGCTCGGATTCCTT +
Preference number: 4 (lower is better)
Translates to: PSRSGHRDICNFCISMRYGLPHK*FQLGFL
Trigger: AAGGAATCCGAGCTGAAACCACTTGTGGGGGAGTCC...GTACCTCATGGATATACAGAAGTTGCAAATATCCCTGTGGCCAGACCTGGACGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR CCA 90 bp TTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGGACTGCTAGCACTGCAGCCTGGACTGTaGCTGTACTCAAAGCTTCTT +
Preference number: 4 (lower is better)
Translates to: FLQGSDPFGWWRRSGLLALQPGL*LYSKLL
Trigger: AAGAAGCTTTGAGTACAGCCACAGTCCAGGCTGCAG...TGCTAGCAGTCCACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CCA 90 bp GTCTCGTTGACTGTGCATCCTCAATGGCATTACATGCTCTCTCTGCTGTGGCGGCAGCCTTTGTCAGGCTaGCAACAAATACCACTTCTG +
Preference number: 4 (lower is better)
Translates to: VSLTVHPQWHYMLSLLWRQPLSG*QQIPLL
Trigger: CAGAAGTGGTATTTGTTGCCAGCCTGACAAAGGCTG...CCGCCACAGCAGAGAGAGCATGTAATGCCATTGAGGATGCACAGTCAACGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR CCA 90 bp CCGTCCAGGTCTGGCCACAGGGATATTTGCAACTTCTGTATATCCATGAGGTACACTCCTCTTCAGGTCTaGCTATCCCAATGCGCTCCA +
Preference number: 4 (lower is better)
Translates to: PSRSGHRDICNFCISMRYTPLQV*LSQCAP
Trigger: TGGAGCGCATTGGGATAGCCAGACCTGAAGAGGAGT...GTACCTCATGGATATACAGAAGTTGCAAATATCCCTGTGGCCAGACCTGGACGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR CCA 90 bp TTTGAAGTGACGTTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTATGATGCCATCTTCATaGATCAGGCGAGGGGGACGG +
Preference number: 4 (lower is better)
Translates to: FEVTFLQGSDPFGWWRRSMMPSS*IRRGGR
Trigger: CCGTCCCCCTCGCCTGATCCATGAAGATGGCATCAT...ACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAACGTCACTTCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CCA 90 bp TTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGGACTGCTAGCAATGCTCTCTCTGCTGTaGCGGTGTCCTTCAGGTAAA +
Preference number: 4 (lower is better)
Translates to: FLQGSDPFGWWRRSGLLAMLSLL*RCPSGK
Trigger: TTTACCTGAAGGACACCGCCACAGCAGAGAGAGCAT...TGCTAGCAGTCCACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
3UTR CAA 72 bp ACTGAAACGAGGCTGTCAGAGCAGGAGCATCAGCCTTaGTCAGGCTGGCAACAAATACCACTTCTGGATCTG +
Preference number: 4 (lower is better)
Translates to: TETRLSEQEHQP*SGWQQIPLLDL
Trigger: CAGATCCAGAAGTGGTATTTGTTGCCAGCCTGACAAAGGCTGATGCTCCTGCTCTGACAGCCTCGTTTCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR TCA 90 bp GCAAAACTCTCTGGCGCCCATCCAGAAATGATACCCAGTGTATCTGGATGTTTGCCTTCTGCCAGCTCATaGGTTTCTGCTGTTCCCTCA +
Preference number: 4 (lower is better)
Translates to: AKLSGAHPEMIPSVSGCLPSASS*VSAVPS
Trigger: TGAGGGAACAGCAGAAACTCATGAGCTGGCAGAAGG...CAAACATCCAGATACACTGGGTATCATTTCTGGATGGGCGCCAGAGAGTTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR TCA 90 bp GTCTCGTTGACTGTGCATCCTCAATGGCATTACATGCTCTCTCTGCTGTGGCGGGACCATTTCTTCTGGTaGCCCACTCTGTTTGTATGT +
Preference number: 4 (lower is better)
Translates to: VSLTVHPQWHYMLSLLWRDHFFW*PTLFVC
Trigger: ACATACAAACAGAGTGGGTCACCAGAAGAAATGGTC...CCGCCACAGCAGAGAGAGCATGTAATGCCATTGAGGATGCACAGTCAACGAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR TCA 90 bp GTCTCGTTGACTGTGCATCCTCAATGGCATTACATGCTCTCTCTGCTGTGGCGGAGATACTTCCTCAGTTaGTTCTGCTGCCCTCTGAAT +
Preference number: 4 (lower is better)
Translates to: VSLTVHPQWHYMLSLLWRRYFLS*FCCPLN
Trigger: ATTCAGAGGGCAGCAGAATCAACTGAGGAAGTATCT...CCGCCACAGCAGAGAGAGCATGTAATGCCATTGAGGATGCACAGTCAACGAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR TCA 90 bp GATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATATGCCTTAGTTTCTTCAAGGGTCTaGCCCATTTGGGTGGTGGCG +
Preference number: 4 (lower is better)
Translates to: DSHRACSLTEHSVIIYALVSSRV*PIWVVA
Trigger: CGCCACCACCCAAATGGGTCAGACCCTTGAAGAAAC...TAAGGCATATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp CCTGAATTGATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATAGGCAGAGATTGCAGTaGGCCAAGATCGCACCACTG +
Preference number: 4 (lower is better)
Translates to: PELILTGPAPSQNTVSLYRQRLQ*AKIAPL
Trigger: CAGTGGTGCGATCTTGGCTCACTGCAATCTCTGCCT...ATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATCAATTCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp TTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGGACTGCTAGCAAATACTGTCCTGAATTaGTTCTCACAGGGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: FLQGSDPFGWWRRSGLLANTVLN*FSQGLL
Trigger: GAGCAGGCCCTGTGAGAATCAATTCAGGACAGTATT...TGCTAGCAGTCCACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR GCA 90 bp TTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGGACTGCTAGCATACCTTAAGTGCTTGTaGTCCTGGTCGCTGAGATAC +
Preference number: 4 (lower is better)
Translates to: FLQGSDPFGWWRRSGLLAYLKCL*SWSLRY
Trigger: GTATCTCAGCGACCAGGAGCACAAGCACTTAAGGTA...TGCTAGCAGTCCACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR GCA 90 bp GAACCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCTGTGGCAGCCCTTTCTaGAGCCTGGGCAGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: EPLSHINKNRANQACPHLCGSPF*SLGSGS
Trigger: GCTGCCACTGCCCAGGCTGCAGAAAGGGCTGCCACA...GAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR GCA 90 bp CCTGAATTGATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATGGAAGCAGCTCTTTCTaGAGCCTGGACTGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: PELILTGPAPSQNTVSLYGSSSF*SLDCGC
Trigger: ACAGCCACAGTCCAGGCTGCAGAAAGAGCTGCTTCC...ATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATCAATTCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR GCA 90 bp TTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGGACTGCTAGCATCCATCCCTGGAATTTaGACATACCATGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: FLQGSDPFGWWRRSGLLASIPGI*TYHAAA
Trigger: AGCAGCAGCATGGTATGTGCAAATTCCAGGGATGGA...TGCTAGCAGTCCACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR GCA 90 bp CCGTCCAGGTCTGGCCACAGGGATATTTGCAACTTCTGTATATCCATGAGGTACAGCAGTACTGCCTTCTaGCAGCTCATGAGTTTCTGC +
Preference number: 4 (lower is better)
Translates to: PSRSGHRDICNFCISMRYSSTAF*QLMSFC
Trigger: GCAGAAACTCATGAGCTGGCAGAAGGCAGTACTGCT...GTACCTCATGGATATACAGAAGTTGCAAATATCCCTGTGGCCAGACCTGGACGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR GCA 90 bp GCAAAACTCTCTGGCGCCCATCCAGAAATGATACCCAGTGTATCTGGATGTTTGGGTACCAGTAGGATCTaGCCAGGCAAAAAGTCGAGC +
Preference number: 4 (lower is better)
Translates to: AKLSGAHPEMIPSVSGCLGTSRI*PGKKSS
Trigger: GCTCGACTTTTTGCCTGGGCAGATCCTACTGGTACC...CAAACATCCAGATACACTGGGTATCATTTCTGGATGGGCGCCAGAGAGTTTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR GCA 90 bp TTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGGACTGCTAGCATTCTTCTGCCTGCAGTaGTTTGGAAACCAAGGCAAC +
Preference number: 4 (lower is better)
Translates to: FLQGSDPFGWWRRSGLLAFFCLQ*FGNQGN
Trigger: GTTGCCTTGGTTTCCAAAGCACTGCAGGCAGAAGAA...TGCTAGCAGTCCACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR GCA 90 bp GTCTCGTTGACTGTGCATCCTCAATGGCATTACATGCTCTCTCTGCTGTGGCGGTCCATTTCTTCTGCCTaGAGTGCTTTGGAAACCAAG +
Preference number: 4 (lower is better)
Translates to: VSLTVHPQWHYMLSLLWRSISSA*SALETK
Trigger: CTTGGTTTCCAAAGCACTGCAGGCAGAAGAAATGGA...CCGCCACAGCAGAGAGAGCATGTAATGCCATTGAGGATGCACAGTCAACGAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR GCA 90 bp GATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATATGCCTTACCGAGAGGCAGAGATTaGAGTGAGCCAAGATCGCAC +
Preference number: 4 (lower is better)
Translates to: DSHRACSLTEHSVIIYALPRGRD*SEPRSH
Trigger: GTGCGATCTTGGCTCACTGCAATCTCTGCCTCTCGG...TAAGGCATATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CCA 90 bp TTTGAAGTGACGTTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTATCGCCGTCCAGGTCTaGCCACAGGGATATTTGCAA +
Preference number: 4 (lower is better)
Translates to: FEVTFLQGSDPFGWWRRSIAVQV*PQGYLQ
Trigger: TTGCAAATATCCCTGTGGCCAGACCTGGACGGCGAT...ACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAACGTCACTTCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CCA 90 bp TTTGAAGTGACGTTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTACTCCTCTTCAGGTCTaGCTATCCCAATGCGCTCCA +
Preference number: 4 (lower is better)
Translates to: FEVTFLQGSDPFGWWRRSTPLQV*LSQCAP
Trigger: TGGAGCGCATTGGGATAGCCAGACCTGAAGAGGAGT...ACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAACGTCACTTCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CCA 90 bp TTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGGACTGCTAGCAGGTACTCCATATTGTTaGCAGGACACTTCACACACC +
Preference number: 4 (lower is better)
Translates to: FLQGSDPFGWWRRSGLLAGTPYC*QDTSHT
Trigger: GGTGTGTGAAGTGTCCTGCCAACAATATGGAGTACC...TGCTAGCAGTCCACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CCA 90 bp TCGTTGACTGTGCATCCTCAATGGCATTACATGCTCTCTCTGCTGTGGCGGTGTAAGTCGAGCCTGTCTTaGCAGCAAGACCATTTCTTC +
Preference number: 4 (lower is better)
Translates to: SLTVHPQWHYMLSLLWRCKSSLS*QQDHFF
Trigger: GAAGAAATGGTCTTGCTGCCAAGACAGGCTCGACTT...ACACCGCCACAGCAGAGAGAGCATGTAATGCCATTGAGGATGCACAGTCAACGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR TCA 90 bp AACATGTCATTTCTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCGCACCATGGTGGCGCTaGGGCACAAGGAGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: NMSFLPLVTFLHSITWFTAPWWR*GTRRGR
Trigger: CCTCCCTCTCCTTGTGCCTCAGCGCCACCATGGTGC...GGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAGAAATGACATGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp GTAACAGTATCTGCTTCTGAGCTCAATAAAGGCTTTCATCTATTAAACGCAGAAGCACCATGGTGGCGCTaGGGCACAAGGAGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: VTVSASELNKGFHLLNAEAPWWR*GTRRGR
Trigger: CCTCCCTCTCCTTGTGCCTCAGCGCCACCATGGTGC...TTCTGCGTTTAATAGATGAAAGCCTTTATTGAGCTCAGAAGCAGATACTGTTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR TCA 90 bp TTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGGACTGCTAGCAGAAGAGCTAATCAAGTaGAGGGGCTTCCTTTTGGAT +
Preference number: 4 (lower is better)
Translates to: FLQGSDPFGWWRRSGLLAEELIK*RGFLLD
Trigger: ATCCAAAAGGAAGCCCCTTCACTTGATTAGCTCTTC...TGCTAGCAGTCCACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp TTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGGACTGCTAGCAGAGGAATCCAGTCCTTaGATCTTGATTTCGGCGATA +
Preference number: 4 (lower is better)
Translates to: FLQGSDPFGWWRRSGLLAEESSP*ILISAI
Trigger: TATCGCCGAAATCAAGATTCAAGGACTGGATTCCTC...TGCTAGCAGTCCACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp GTCTCGTTGACTGTGCATCCTCAATGGCATTACATGCTCTCTCTGCTGTGGCGGCTGCAAAATAGTTCTTaGCAGCTTCAACTGAGTGAG +
Preference number: 4 (lower is better)
Translates to: VSLTVHPQWHYMLSLLWRLQNSS*QLQLSE
Trigger: CTCACTCAGTTGAAGCTGTCAAGAACTATTTTGCAG...CCGCCACAGCAGAGAGAGCATGTAATGCCATTGAGGATGCACAGTCAACGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR TCA 90 bp TTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGGACTGCTAGCATCTCAATTCCTTCTCTaGGATCATCAAGGGTGCATG +
Preference number: 4 (lower is better)
Translates to: FLQGSDPFGWWRRSGLLASQFLL*DHQGCM
Trigger: CATGCACCCTTGATGATCTCAGAGAAGGAATTGAGA...TGCTAGCAGTCCACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR TCA 90 bp TTTGAAGTGACGTTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTAGAGAAAGGTTGCACTaGAACGAGGCTGTCAGAGCA +
Preference number: 4 (lower is better)
Translates to: FEVTFLQGSDPFGWWRRSRERLH*NEAVRA
Trigger: TGCTCTGACAGCCTCGTTTCAGTGCAACCTTTCTCT...ACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAACGTCACTTCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR TCA 90 bp TTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGGACTGCTAGCAATAGATAGGTTCCCTTaGCTTGAAGGTACCATGCTG +
Preference number: 4 (lower is better)
Translates to: FLQGSDPFGWWRRSGLLAIDRFP*LEGTML
Trigger: CAGCATGGTACCTTCAAGTCAAGGGAACCTATCTAT...TGCTAGCAGTCCACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR TCA 90 bp CCTGAATTGATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATCCTTCTGCCAGCTCATaGGTTTCTGCTGTTCCCTCA +
Preference number: 4 (lower is better)
Translates to: PELILTGPAPSQNTVSLYPSASS*VSAVPS
Trigger: TGAGGGAACAGCAGAAACTCATGAGCTGGCAGAAGG...ATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATCAATTCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp TTTGAAGTGACGTTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGCGCCCATCCAGAAATaGTACCCAGTGTATCTGGAT +
Preference number: 4 (lower is better)
Translates to: FEVTFLQGSDPFGWWRRSAPIQK*YPVYLD
Trigger: ATCCAGATACACTGGGTATCATTTCTGGATGGGCGC...ACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAACGTCACTTCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR TCA 90 bp TTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGGACTGCTAGCATTCATTGTTAACCAGTaGAAGCCCAAGACTGTGGAG +
Preference number: 4 (lower is better)
Translates to: FLQGSDPFGWWRRSGLLAFIVNQ*KPKTVE
Trigger: CTCCACAGTCTTGGGCTTTCACTGGTTAACAATGAA...TGCTAGCAGTCCACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR TCA 90 bp CTCTCACACAAAGTTTGCCTGACAAACTTTCTGGCCAAAATGGAAGGCACTCTGAATTCTTCAGGGCCTTaGACAGCACCCTGGAAGGGT +
Preference number: 4 (lower is better)
Translates to: LSHKVCLTNFLAKMEGTLNSSGP*TAPWKG
Trigger: ACCCTTCCAGGGTGCTGTTCAAGGCCCTGAAGAATT...CAGAGTGCCTTCCATTTTGGCCAGAAAGTTTGTCAGGCAAACTTTGTGTGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR TCA 90 bp TTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGGACTGCTAGCAAGATACTTCCTCAGTTaGTTCTGCTGCCCTCTGAAT +
Preference number: 4 (lower is better)
Translates to: FLQGSDPFGWWRRSGLLARYFLS*FCCPLN
Trigger: ATTCAGAGGGCAGCAGAATCAACTGAGGAAGTATCT...TGCTAGCAGTCCACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR TCA 90 bp CCTGAATTGATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATTTGCTGCTGTCTCGTTaGCTGTGCATCCTCAATGGC +
Preference number: 4 (lower is better)
Translates to: PELILTGPAPSQNTVSLYLLLSR*LCILNG
Trigger: GCCATTGAGGATGCACAGTCAACGAGACAGCAGCAA...ATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATCAATTCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR GCA 90 bp TTTGAAGTGACGTTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTTATCAGGATGGTAGATaGCTGGCTGGATCACTGTCC +
Preference number: 4 (lower is better)
Translates to: FEVTFLQGSDPFGWWRRSYQDGR*LAGSLS
Trigger: GGACAGTGATCCAGCCAGGCATCTACCATCCTGATA...ACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAACGTCACTTCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR GCA 90 bp GTCTCGTTGACTGTGCATCCTCAATGGCATTACATGCTCTCTCTGCTGTGGCGGGCTTCCATTCCAAGTTaGAGGACATTTAGCTCATGT +
Preference number: 4 (lower is better)
Translates to: VSLTVHPQWHYMLSLLWRASIPS*RTFSSC
Trigger: ACATGAGCTAAATGTCCTGCAACTTGGAATGGAAGC...CCGCCACAGCAGAGAGAGCATGTAATGCCATTGAGGATGCACAGTCAACGAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR GCA 90 bp GTCTCGTTGACTGTGCATCCTCAATGGCATTACATGCTCTCTCTGCTGTGGCGGGGCCACAGGGATATTTaGAACTTCTGTATATCCATG +
Preference number: 4 (lower is better)
Translates to: VSLTVHPQWHYMLSLLWRGHRDI*NFCISM
Trigger: CATGGATATACAGAAGTTGCAAATATCCCTGTGGCC...CCGCCACAGCAGAGAGAGCATGTAATGCCATTGAGGATGCACAGTCAACGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR GCA 90 bp TTTGAAGTGACGTTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTAGCAGTACTGCCTTCTaGCAGCTCATGAGTTTCTGC +
Preference number: 4 (lower is better)
Translates to: FEVTFLQGSDPFGWWRRSSSTAF*QLMSFC
Trigger: GCAGAAACTCATGAGCTGGCAGAAGGCAGTACTGCT...ACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAACGTCACTTCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR GCA 90 bp TCGTTGACTGTGCATCCTCAATGGCATTACATGCTCTCTCTGCTGTGGCGGTGTCATTATCAAGGCAGGTaGAGATCCCTCATGGTAATC +
Preference number: 4 (lower is better)
Translates to: SLTVHPQWHYMLSLLWRCHYQGR*RSLMVI
Trigger: GATTACCATGAGGGATCTGCACCTGCCTTGATAATG...ACACCGCCACAGCAGAGAGAGCATGTAATGCCATTGAGGATGCACAGTCAACGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR GCA 90 bp TTTGAAGTGACGTTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTATTACATGCTCTCTCTaGTGTGGCGGTGTCCTTCAG +
Preference number: 4 (lower is better)
Translates to: FEVTFLQGSDPFGWWRRSITCSL*CGGVLQ
Trigger: CTGAAGGACACCGCCACAGCAGAGAGAGCATGTAAT...ACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAACGTCACTTCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR GCA 90 bp GATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATATGCCTTAGATTCTCACAGGGCCTaGTCCCTCACAGAACACAGT +
Preference number: 4 (lower is better)
Translates to: DSHRACSLTEHSVIIYALDSHRA*SLTEHS
Trigger: ACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATC...TAAGGCATATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CCA 90 bp TTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGGACTGCTAGCAGGAAATAGAAGACTGTaGGATGACTATAACCGGTGC +
Preference number: 4 (lower is better)
Translates to: FLQGSDPFGWWRRSGLLAGNRRL*DDYNRC
Trigger: GCACCGGTTATAGTCATCCCACAGTCTTCTATTTCC...TGCTAGCAGTCCACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CCA 90 bp CCTGAATTGATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATATCGCCGTCCAGGTCTaGCCACAGGGATATTTGCAA +
Preference number: 4 (lower is better)
Translates to: PELILTGPAPSQNTVSLYIAVQV*PQGYLQ
Trigger: TTGCAAATATCCCTGTGGCCAGACCTGGACGGCGAT...ATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATCAATTCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CCA 90 bp CCTGAATTGATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATACTCCTCTTCAGGTCTaGCTATCCCAATGCGCTCCA +
Preference number: 4 (lower is better)
Translates to: PELILTGPAPSQNTVSLYTPLQV*LSQCAP
Trigger: TGGAGCGCATTGGGATAGCCAGACCTGAAGAGGAGT...ATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATCAATTCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CCA 90 bp GATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATATGCCTTACCAATTCTCCTGACGTaGACTGACAGGTCGACTGTC +
Preference number: 4 (lower is better)
Translates to: DSHRACSLTEHSVIIYALPILLT*TDRSTV
Trigger: GACAGTCGACCTGTCAGTCCACGTCAGGAGAATTGG...TAAGGCATATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CCA 90 bp GTCTCGTTGACTGTGCATCCTCAATGGCATTACATGCTCTCTCTGCTGTGGCGGATGTCCCATGGTGTATaGTTCATTATCAAGGCAGGT +
Preference number: 4 (lower is better)
Translates to: VSLTVHPQWHYMLSLLWRMSHGV*FIIKAG
Trigger: ACCTGCCTTGATAATGAACCATACACCATGGGACAT...CCGCCACAGCAGAGAGAGCATGTAATGCCATTGAGGATGCACAGTCAACGAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR CCA 90 bp GTCTCGTTGACTGTGCATCCTCAATGGCATTACATGCTCTCTCTGCTGTGGCGGAAAAGCAAAACTCTCTaGCGCCCATCCAGAAATGAT +
Preference number: 4 (lower is better)
Translates to: VSLTVHPQWHYMLSLLWRKSKTL*RPSRND
Trigger: ATCATTTCTGGATGGGCGCCAGAGAGTTTTGCTTTT...CCGCCACAGCAGAGAGAGCATGTAATGCCATTGAGGATGCACAGTCAACGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR CCA 90 bp CCGTCCAGGTCTGGCCACAGGGATATTTGCAACTTCTGTATATCCATGAGGTACCTGCCTGCAGTGCTTTaGAAACCAAGGCAACATCAT +
Preference number: 4 (lower is better)
Translates to: PSRSGHRDICNFCISMRYLPAVL*KPRQHH
Trigger: ATGATGTTGCCTTGGTTTCCAAAGCACTGCAGGCAG...GTACCTCATGGATATACAGAAGTTGCAAATATCCCTGTGGCCAGACCTGGACGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR CCA 90 bp TGCCTGACAAACTTTCTGGCCAAAATGGAAGGCACTCTGAAGAAGCAATATAGTTACGATTCCACCAGTTaGACGGGCCACAGCACCCAC +
Preference number: 4 (lower is better)
Translates to: CLTNFLAKMEGTLKKQYSYDSTS*TGHSTH
Trigger: GTGGGTGCTGTGGCCCGTCCAACTGGTGGAATCGTA...ACTATATTGCTTCTTCAGAGTGCCTTCCATTTTGGCCAGAAAGTTTGTCAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR CCA 90 bp GTCTCGTTGACTGTGCATCCTCAATGGCATTACATGCTCTCTCTGCTGTGGCGGTCCAACATTTGTTCATaGGTTAAAGCCTTTTGGCGG +
Preference number: 4 (lower is better)
Translates to: VSLTVHPQWHYMLSLLWRSNICS*VKAFWR
Trigger: CCGCCAAAAGGCTTTAACCCATGAACAAATGTTGGA...CCGCCACAGCAGAGAGAGCATGTAATGCCATTGAGGATGCACAGTCAACGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR CAA 72 bp GAAGATCCTTCACAGCCCACCACTCTCACACAAAGTTaGCCTGACAAACTTTCTGGCCAAAATGGAAGGCAC +
Preference number: 4 (lower is better)
Translates to: EDPSQPTTLTQS*PDKLSGQNGRH
Trigger: GTGCCTTCCATTTTGGCCAGAAAGTTTGTCAGGCAAACTTTGTGTGAGAGTGGTGGGCTGTGAAGGATCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR TCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTGCACCATGGTGGCGCTaGGGCACAAGGAGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFAPWWR*GTRRGR
Trigger: CCTCCCTCTCCTTGTGCCTCAGCGCCACCATGGTGC...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR TCA 90 bp TTTGAAGTGACGTTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTTGCTGGATACAGCTTTaGCAGCGATACTTCTGGACT +
Preference number: 4 (lower is better)
Translates to: FEVTFLQGSDPFGWWRRSCWIQL*QRYFWT
Trigger: AGTCCAGAAGTATCGCTGTCAAAGCTGTATCCAGCA...ACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAACGTCACTTCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR TCA 90 bp TTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGGACTGCTAGCAGAGACAGCCTTTTTGTaGATGGACTGCAAATCTACA +
Preference number: 4 (lower is better)
Translates to: FLQGSDPFGWWRRSGLLAETAFL*MDCKST
Trigger: TGTAGATTTGCAGTCCATTCACAAAAAGGCTGTCTC...TGCTAGCAGTCCACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR TCA 90 bp TTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGGACTGCTAGCACTTGACAGCTTCAACTaGGTGAGTTCGATGTTCATT +
Preference number: 4 (lower is better)
Translates to: FLQGSDPFGWWRRSGLLALDSFN*VSSMFI
Trigger: AATGAACATCGAACTCACTCAGTTGAAGCTGTCAAG...TGCTAGCAGTCCACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR TCA 90 bp TTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGGACTGCTAGCAACATTTTCTGGACTCTaGGGCACAGCTTTGATAAAG +
Preference number: 4 (lower is better)
Translates to: FLQGSDPFGWWRRSGLLATFSGL*GTALIK
Trigger: CTTTATCAAAGCTGTGCCTCAGAGTCCAGAAAATGT...TGCTAGCAGTCCACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR TCA 90 bp TTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGGACTGCTAGCAAAGAAGGAGCTTTCTTaGCGGCTCAATATAGATAGG +
Preference number: 4 (lower is better)
Translates to: FLQGSDPFGWWRRSGLLAKKELS*RLNIDR
Trigger: CCTATCTATATTGAGCCGTCAAGAAAGCTCCTTCTT...TGCTAGCAGTCCACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR TCA 90 bp CCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCCATTCTCCTGACGTGGACTaGCAGGTCGACTGTCGTCAC +
Preference number: 4 (lower is better)
Translates to: PLSHINKNRANQACPHLHSPDVD*QVDCRH
Trigger: GTGACGACAGTCGACCTGTCAGTCCACGTCAGGAGA...ATGGAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp TTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGGACTGCTAGCACAGGGTAACTATTCGTaGAAGGTTGAAACTGCTCAT +
Preference number: 4 (lower is better)
Translates to: FLQGSDPFGWWRRSGLLAQGNYS*KVETAH
Trigger: ATGAGCAGTTTCAACCTTTCACGAATAGTTACCCTG...TGCTAGCAGTCCACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR TCA 90 bp CTCTCACACAAAGTTTGCCTGACAAACTTTCTGGCCAAAATGGAAGGCACTCTGTCCCAACAGAACCGGTaGTTCGAGATACAACTCCTG +
Preference number: 4 (lower is better)
Translates to: LSHKVCLTNFLAKMEGTLSQQNR*FEIQLL
Trigger: CAGGAGTTGTATCTCGAATCACCGGTTCTGTTGGGA...CAGAGTGCCTTCCATTTTGGCCAGAAAGTTTGTCAGGCAAACTTTGTGTGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR TCA 90 bp TCTCTGAGAAAAGGGCAAGCGAGCACTTTCAGATCTCTCACAGAAGCTTCCATCATGGCAATTGGGGTCTaGGAAGTCTCACTGATGACT +
Preference number: 4 (lower is better)
Translates to: SLRKGQASTFRSLTEASIMAIGV*EVSLMT
Trigger: AGTCATCAGTGAGACTTCTCAGACCCCAATTGCCAT...GATGGAAGCTTCTGTGAGAGATCTGAAAGTGCTCGCTTGCCCTTTTCTCAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR TCA 90 bp TTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGGACTGCTAGCAATTCTGAGTTTGAAGTaGCGTTTCTTCAAGGGTCTG +
Preference number: 4 (lower is better)
Translates to: FLQGSDPFGWWRRSGLLAILSLK*RFFKGL
Trigger: CAGACCCTTGAAGAAACGTCACTTCAAACTCAGAAT...TGCTAGCAGTCCACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR TCA 90 bp TTTGAAGTGACGTTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTAATACTGTCCTGAATTaGTTCTCACAGGGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: FEVTFLQGSDPFGWWRRSNTVLN*FSQGLL
Trigger: GAGCAGGCCCTGTGAGAATCAATTCAGGACAGTATT...ACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAACGTCACTTCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR GCA 90 bp TTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGGACTGCTAGCAGGCCACAGGGATATTTaGAACTTCTGTATATCCATG +
Preference number: 4 (lower is better)
Translates to: FLQGSDPFGWWRRSGLLAGHRDI*NFCISM
Trigger: CATGGATATACAGAAGTTGCAAATATCCCTGTGGCC...TGCTAGCAGTCCACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR GCA 90 bp GATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATATGCCTTAAGCAGTACTGCCTTCTaGCAGCTCATGAGTTTCTGC +
Preference number: 4 (lower is better)
Translates to: DSHRACSLTEHSVIIYALSSTAF*QLMSFC
Trigger: GCAGAAACTCATGAGCTGGCAGAAGGCAGTACTGCT...TAAGGCATATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR GCA 90 bp GTCTCGTTGACTGTGCATCCTCAATGGCATTACATGCTCTCTCTGCTGTGGCGGAGTCTCACTGATGACTaGTTCATCAATTTTTGCTGC +
Preference number: 4 (lower is better)
Translates to: VSLTVHPQWHYMLSLLWRSLTDD*FINFCC
Trigger: GCAGCAAAAATTGATGAAGCAGTCATCAGTGAGACT...CCGCCACAGCAGAGAGAGCATGTAATGCCATTGAGGATGCACAGTCAACGAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR GCA 90 bp CCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCCATCCAAGATCGCACCACTaGATTCCAGCCTGGGCGACA +
Preference number: 4 (lower is better)
Translates to: PLSHINKNRANQACPHLHPRSHH*IPAWAT
Trigger: TGTCGCCCAGGCTGGAATGCAGTGGTGCGATCTTGG...ATGGAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CCA 90 bp TTTGAAGTGACGTTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTAGGATGGTAGATGCCTaGCTGGATCACTGTCCTATA +
Preference number: 4 (lower is better)
Translates to: FEVTFLQGSDPFGWWRRSRMVDA*LDHCPI
Trigger: TATAGGACAGTGATCCAGCCAGGCATCTACCATCCT...ACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAACGTCACTTCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CCA 90 bp TTTGAAGTGACGTTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTACAACAGGCACCTTGTaGTACCAAGATGCAGCTAGA +
Preference number: 4 (lower is better)
Translates to: FEVTFLQGSDPFGWWRRSTTGTL*YQDAAR
Trigger: TCTAGCTGCATCTTGGTACCACAAGGTGCCTGTTGT...ACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAACGTCACTTCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CCA 90 bp CCTGAATTGATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATCACTCTCTCAATCAGTaGCTCCCAGACAGCATGGAT +
Preference number: 4 (lower is better)
Translates to: PELILTGPAPSQNTVSLYHSLNQ*LPDSMD
Trigger: ATCCATGCTGTCTGGGAGCCACTGATTGAGAGAGTG...ATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATCAATTCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CCA 90 bp GCAAAACTCTCTGGCGCCCATCCAGAAATGATACCCAGTGTATCTGGATGTTTGGGTACTCCATATTGTTaGCAGGACACTTCACACACC +
Preference number: 4 (lower is better)
Translates to: AKLSGAHPEMIPSVSGCLGTPYC*QDTSHT
Trigger: GGTGTGTGAAGTGTCCTGCCAACAATATGGAGTACC...CAAACATCCAGATACACTGGGTATCATTTCTGGATGGGCGCCAGAGAGTTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR CCA 90 bp TTTGAAGTGACGTTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTAAGTCGAGCCTGTCTTaGCAGCAAGACCATTTCTTC +
Preference number: 4 (lower is better)
Translates to: FEVTFLQGSDPFGWWRRSKSSLS*QQDHFF
Trigger: GAAGAAATGGTCTTGCTGCCAAGACAGGCTCGACTT...ACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAACGTCACTTCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CCA 90 bp TTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGGACTGCTAGCACTTCCATTTCTGCTTTaGTTTCACCTCCCAAACAAC +
Preference number: 4 (lower is better)
Translates to: FLQGSDPFGWWRRSGLLALPFLL*FHLPNN
Trigger: GTTGTTTGGGAGGTGAAACCAAAGCAGAAATGGAAG...TGCTAGCAGTCCACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CCA 90 bp TTTGAAGTGACGTTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGAAGCCAGTACAACCTaGCCCTTAAACTTCTCTGGT +
Preference number: 4 (lower is better)
Translates to: FEVTFLQGSDPFGWWRRSEASTT*PLNFSG
Trigger: ACCAGAGAAGTTTAAGGGCCAGGTTGTACTGGCTTC...ACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAACGTCACTTCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CCA 90 bp TTTGAAGTGACGTTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTCAGCTCCTTCCTTTTTaGCACCTTCCACAGGTTTTG +
Preference number: 4 (lower is better)
Translates to: FEVTFLQGSDPFGWWRRSQLLPF*HLPQVL
Trigger: CAAAACCTGTGGAAGGTGCCAAAAAGGAAGGAGCTG...ACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAACGTCACTTCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CCA 90 bp TTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGGACTGCTAGCATCCAACATTTGTTCATaGGTTAAAGCCTTTTGGCGG +
Preference number: 4 (lower is better)
Translates to: FLQGSDPFGWWRRSGLLASNICS*VKAFWR
Trigger: CCGCCAAAAGGCTTTAACCCATGAACAAATGTTGGA...TGCTAGCAGTCCACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR TCA 90 bp GATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATATGCCTTACCAGTTTGGGCGTTTTaGGCTCTGATTCTGCATAAG +
Preference number: 4 (lower is better)
Translates to: DSHRACSLTEHSVIIYALPVWAF*ALILHK
Trigger: CTTATGCAGAATCAGAGCTCAAAACGCCCAAACTGG...TAAGGCATATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp TTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGGACTGCTAGCATTAGCCAACTCAACATaGATATCCATGGGTTGCAAT +
Preference number: 4 (lower is better)
Translates to: FLQGSDPFGWWRRSGLLALANST*ISMGCN
Trigger: ATTGCAACCCATGGATATTCATGTTGAGTTGGCTAA...TGCTAGCAGTCCACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp TTTGAAGTGACGTTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTCAAAGGAAGTCCTCCTaGCACTTTAAATCTGGCCAT +
Preference number: 4 (lower is better)
Translates to: FEVTFLQGSDPFGWWRRSQRKSS*HFKSGH
Trigger: ATGGCCAGATTTAAAGTGTCAGGAGGACTTCCTTTG...ACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAACGTCACTTCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp GATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATATGCCTTATGCTGGATACAGCTTTaGCAGCGATACTTCTGGACT +
Preference number: 4 (lower is better)
Translates to: DSHRACSLTEHSVIIYALCWIQL*QRYFWT
Trigger: AGTCCAGAAGTATCGCTGTCAAAGCTGTATCCAGCA...TAAGGCATATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp TTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGGACTGCTAGCAATGGTCAGGTACACTTaGAACATCAACTTTTCTCAC +
Preference number: 4 (lower is better)
Translates to: FLQGSDPFGWWRRSGLLAMVRYT*NINFSH
Trigger: GTGAGAAAAGTTGATGTTTCAAGTGTACCTGACCAT...TGCTAGCAGTCCACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp TTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGGACTGCTAGCATGGAAACTGTCATTATaGAATGCAACTCCAGATTCC +
Preference number: 4 (lower is better)
Translates to: FLQGSDPFGWWRRSGLLAWKLSL*NATPDS
Trigger: GGAATCTGGAGTTGCATTTCATAATGACAGTTTCCA...TGCTAGCAGTCCACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR TCA 90 bp GATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATATGCCTTACATCTTTCTCTATCTTaGCCTTCCCTGTGGCAGTCT +
Preference number: 4 (lower is better)
Translates to: DSHRACSLTEHSVIIYALHLSLS*PSLWQS
Trigger: AGACTGCCACAGGGAAGGTCAAGATAGAGAAAGATG...TAAGGCATATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp GCAAAACTCTCTGGCGCCCATCCAGAAATGATACCCAGTGTATCTGGATGTTTGTTCGAGTTTGGATGTTaGCAGAGAAAGGTTGCACTG +
Preference number: 4 (lower is better)
Translates to: AKLSGAHPEMIPSVSGCLFEFGC*QRKVAL
Trigger: CAGTGCAACCTTTCTCTGTCAACATCCAAACTCGAA...CAAACATCCAGATACACTGGGTATCATTTCTGGATGGGCGCCAGAGAGTTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR TCA 90 bp GCAAAACTCTCTGGCGCCCATCCAGAAATGATACCCAGTGTATCTGGATGTTTGATAGATAGGTTCCCTTaGCTTGAAGGTACCATGCTG +
Preference number: 4 (lower is better)
Translates to: AKLSGAHPEMIPSVSGCLIDRFP*LEGTML
Trigger: CAGCATGGTACCTTCAAGTCAAGGGAACCTATCTAT...CAAACATCCAGATACACTGGGTATCATTTCTGGATGGGCGCCAGAGAGTTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR TCA 90 bp TCTCTGAGAAAAGGGCAAGCGAGCACTTTCAGATCTCTCACAGAAGCTTCCATCGTACAATGGTCAGAGTaGAGAAGGAGCTTTCTTGAC +
Preference number: 4 (lower is better)
Translates to: SLRKGQASTFRSLTEASIVQWSE*RRSFLD
Trigger: GTCAAGAAAGCTCCTTCTTCACTCTGACCATTGTAC...GATGGAAGCTTCTGTGAGAGATCTGAAAGTGCTCGCTTGCCCTTTTCTCAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR TCA 90 bp CTCTCACACAAAGTTTGCCTGACAAACTTTCTGGCCAAAATGGAAGGCACTCTGACTGCAACATGCATCTaGCTTCCCTGCTCCTATGAA +
Preference number: 4 (lower is better)
Translates to: LSHKVCLTNFLAKMEGTLTATCI*LPCSYE
Trigger: TTCATAGGAGCAGGGAAGTCAGATGCATGTTGCAGT...CAGAGTGCCTTCCATTTTGGCCAGAAAGTTTGTCAGGCAAACTTTGTGTGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR TCA 90 bp TTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGGACTGCTAGCACCATTATTTCACCACTaGTTCTCGAATGCAGAACAT +
Preference number: 4 (lower is better)
Translates to: FLQGSDPFGWWRRSGLLAPLFHH*FSNAEH
Trigger: ATGTTCTGCATTCGAGAATCAGTGGTGAAATAATGG...TGCTAGCAGTCCACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR TCA 90 bp CACTCTCTCAATCAGTGGCTCCCAGACAGCATGGATCTCATTGTAATAGTGCACCACATGAATATCTTCTaGACGATACTGGAGAACCCG +
Preference number: 4 (lower is better)
Translates to: HSLNQWLPDSMDLIVIVHHMNIF*TILENP
Trigger: CGGGTTCTCCAGTATCGTTCAGAAGATATTCATGTG...GTGCACTATTACAATGAGATCCATGCTGTCTGGGAGCCACTGATTGAGAGAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR TCA 90 bp CTTCCATCATCTGTTCGAGTTTGGATGTTGACAGAGAAAGGTTGCACTGAAACGTCCCACTGTATCCAATaGGAAACTACTGGACCAGGC +
Preference number: 4 (lower is better)
Translates to: LPSSVRVWMLTEKGCTETSHCIQ*ETTGPG
Trigger: GCCTGGTCCAGTAGTTTCTCATTGGATACAGTGGGA...CGTTTCAGTGCAACCTTTCTCTGTCAACATCCAAACTCGAACAGATGATGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR TCA 90 bp TCGTTGACTGTGCATCCTCAATGGCATTACATGCTCTCTCTGCTGTGGCGGTGTAAATGGAAGGCACTCTaGAGAAGCAATATAGTTCCA +
Preference number: 4 (lower is better)
Translates to: SLTVHPQWHYMLSLLWRCKWKAL*RSNIVP
Trigger: TGGAACTATATTGCTTCTTCAGAGTGCCTTCCATTT...ACACCGCCACAGCAGAGAGAGCATGTAATGCCATTGAGGATGCACAGTCAACGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR TCA 90 bp TTTGAAGTGACGTTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGACCATTTCTTCTGGTaGCCCACTCTGTTTGTATGT +
Preference number: 4 (lower is better)
Translates to: FEVTFLQGSDPFGWWRRSDHFFW*PTLFVC
Trigger: ACATACAAACAGAGTGGGTCACCAGAAGAAATGGTC...ACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAACGTCACTTCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR TCA 90 bp CTTCCATCATCTGTTCGAGTTTGGATGTTGACAGAGAAAGGTTGCACTGAAACGGCGCCCATCCAGAAATaGTACCCAGTGTATCTGGAT +
Preference number: 4 (lower is better)
Translates to: LPSSVRVWMLTEKGCTETAPIQK*YPVYLD
Trigger: ATCCAGATACACTGGGTATCATTTCTGGATGGGCGC...CGTTTCAGTGCAACCTTTCTCTGTCAACATCCAAACTCGAACAGATGATGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR TCA 90 bp CCTGAATTGATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATAGGCAACATCATCGGTaGAAAGCAAAACTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: PELILTGPAPSQNTVSLYRQHHR*KAKLSG
Trigger: GCCAGAGAGTTTTGCTTTTCACCGATGATGTTGCCT...ATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATCAATTCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp GATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATATGCCTTAAGGCAACATCATCGGTaGAAAGCAAAACTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: DSHRACSLTEHSVIIYALRQHHR*KAKLSG
Trigger: GCCAGAGAGTTTTGCTTTTCACCGATGATGTTGCCT...TAAGGCATATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp GATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATATGCCTTAATGGCAATTGGGGTCTaGGAAGTCTCACTGATGACT +
Preference number: 4 (lower is better)
Translates to: DSHRACSLTEHSVIIYALMAIGV*EVSLMT
Trigger: AGTCATCAGTGAGACTTCTCAGACCCCAATTGCCAT...TAAGGCATATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp GAACCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCGTTTCTTCAAGGGTCTaGCCCATTTGGGTGGTGGCG +
Preference number: 4 (lower is better)
Translates to: EPLSHINKNRANQACPHLVSSRV*PIWVVA
Trigger: CGCCACCACCCAAATGGGTCAGACCCTTGAAGAAAC...GAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp TCGTTTAATAGGGCTACGAATAGGGAGGCGCATTTCCATTGGATCTTTATCAAAGTTTCTTCAAGGGTCTaGCCCATTTGGGTGGTGGCG +
Preference number: 4 (lower is better)
Translates to: SFNRATNREAHFHWIFIKVSSRV*PIWVVA
Trigger: CGCCACCACCCAAATGGGTCAGACCCTTGAAGAAAC...TTTGATAAAGATCCAATGGAAATGCGCCTCCCTATTCGTAGCCCTATTAAACGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR TCA 90 bp GCAAAACTCTCTGGCGCCCATCCAGAAATGATACCCAGTGTATCTGGATGTTTGATCTCATCTTCAGAATaGGTCTCAGAGAGGAGTGCA +
Preference number: 4 (lower is better)
Translates to: AKLSGAHPEMIPSVSGCLISSSE*VSERSA
Trigger: TGCACTCCTCTCTGAGACTCATTCTGAAGATGAGAT...CAAACATCCAGATACACTGGGTATCATTTCTGGATGGGCGCCAGAGAGTTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR TCA 90 bp CCTGAATTGATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATTCTCCAAGCCATATATaGACTCCCCTGAATGTGTGC +
Preference number: 4 (lower is better)
Translates to: PELILTGPAPSQNTVSLYSPSHI*TPLNVC
Trigger: GCACACATTCAGGGGAGTTCATATATGGCTTGGAGA...ATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATCAATTCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644861.2
CDS-3UTR GCA 90 bp TTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGGACTGCTAGCATCTGGTAAGACATGCTaGAATTTACATTCCAGTAGG +
Preference number: 4 (lower is better)
Translates to: FLQGSDPFGWWRRSGLLASGKTC*NLHSSR
Trigger: CCTACTGGAATGTAAATTGCAGCATGTCTTACCAGA...TGCTAGCAGTCCACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR GCA 90 bp TTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGGACTGCTAGCATCAGAAATTCTCACATaGATCAAAGGAAGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: FLQGSDPFGWWRRSGLLASEILT*IKGSPP
Trigger: AGGAGGACTTCCTTTGATGCATGTGAGAATTTCTGA...TGCTAGCAGTCCACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR GCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAATGTGGCAGCCCTTTCTaGAGCCTGGGCAGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKCGSPF*SLGSGS
Trigger: GCTGCCACTGCCCAGGCTGCAGAAAGGGCTGCCACA...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR GCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTTGTGGCAGCCCTTTCTaGAGCCTGGGCAGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFCGSPF*SLGSGS
Trigger: GCTGCCACTGCCCAGGCTGCAGAAAGGGCTGCCACA...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR GCA 90 bp CCTGAATTGATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATACTCTTACAGTCTCCTaGACAGACTGTGTAGGGCTT +
Preference number: 4 (lower is better)
Translates to: PELILTGPAPSQNTVSLYTLTVS*TDCVGL
Trigger: AAGCCCTACACAGTCTGTGCAGGAGACTGTAAGAGT...ATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATCAATTCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR GCA 90 bp CCTGAATTGATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATGACTTGAAGGTACCATaGTGGCATACTCCAGTTCCA +
Preference number: 4 (lower is better)
Translates to: PELILTGPAPSQNTVSLYDLKVP*WHTPVP
Trigger: TGGAACTGGAGTATGCCAGCATGGTACCTTCAAGTC...ATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATCAATTCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR GCA 90 bp TTTGAAGTGACGTTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTCCACTGATTCTCGAATaGAGAACATCAGCAGTACTG +
Preference number: 4 (lower is better)
Translates to: FEVTFLQGSDPFGWWRRSPLILE*RTSAVL
Trigger: CAGTACTGCTGATGTTCTGCATTCGAGAATCAGTGG...ACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAACGTCACTTCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR GCA 90 bp TTTGAAGTGACGTTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTCATTATCAAGGCAGGTaGAGATCCCTCATGGTAATC +
Preference number: 4 (lower is better)
Translates to: FEVTFLQGSDPFGWWRRSHYQGR*RSLMVI
Trigger: GATTACCATGAGGGATCTGCACCTGCCTTGATAATG...ACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAACGTCACTTCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR GCA 90 bp GCAAAACTCTCTGGCGCCCATCCAGAAATGATACCCAGTGTATCTGGATGTTTGCTGTTCCATTTCTTCTaGCTGCAGTGCTTTGGAAAC +
Preference number: 4 (lower is better)
Translates to: AKLSGAHPEMIPSVSGCLLFHFF*LQCFGN
Trigger: GTTTCCAAAGCACTGCAGGCAGAAGAAATGGAACAG...CAAACATCCAGATACACTGGGTATCATTTCTGGATGGGCGCCAGAGAGTTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR GCA 90 bp TTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGGACTGCTAGCATCTTCAAATGGACATTaGCAGTCTACACACATAAGG +
Preference number: 4 (lower is better)
Translates to: FLQGSDPFGWWRRSGLLASSNGH*QSTHIR
Trigger: CCTTATGTGTGTAGACTGGCAATGTCCATTTGAAGA...TGCTAGCAGTCCACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR GCA 90 bp TTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGGACTGCTAGCATTCATCAATTTTTGCTaGTGTCTCGTTGACTGTGCA +
Preference number: 4 (lower is better)
Translates to: FLQGSDPFGWWRRSGLLAFINFC*CLVDCA
Trigger: TGCACAGTCAACGAGACAGCAGCAAAAATTGATGAA...TGCTAGCAGTCCACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR GCA 90 bp GAACCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCCCGAGAGGCAGAGATTaGAGTGAGCCAAGATCGCAC +
Preference number: 4 (lower is better)
Translates to: EPLSHINKNRANQACPHLPRGRD*SEPRSH
Trigger: GTGCGATCTTGGCTCACTGCAATCTCTGCCTCTCGG...GAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CCA 90 bp CCTGAATTGATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATAAGTGCTTGTGCTCCTaGTCGCTGAGATACTTGAGT +
Preference number: 4 (lower is better)
Translates to: PELILTGPAPSQNTVSLYKCLCS*SLRYLS
Trigger: ACTCAAGTATCTCAGCGACCAGGAGCACAAGCACTT...ATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATCAATTCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CCA 90 bp TTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGGACTGCTAGCAGACTCTTTGGCTGTCTaGAAATTATTCAGGAAGTTC +
Preference number: 4 (lower is better)
Translates to: FLQGSDPFGWWRRSGLLADSLAV*KLFRKF
Trigger: GAACTTCCTGAATAATTTCCAGACAGCCAAAGAGTC...TGCTAGCAGTCCACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CCA 90 bp TTTGAAGTGACGTTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGTTTGCCGTCTACTTTaGACATATCAGCATAGGCCT +
Preference number: 4 (lower is better)
Translates to: FEVTFLQGSDPFGWWRRSVCRLL*TYQHRP
Trigger: AGGCCTATGCTGATATGTCCAAAGTAGACGGCAAAC...ACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAACGTCACTTCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CCA 90 bp TTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGGACTGCTAGCATTTTATCTCCATCCCTaGAATTTGCACATACCATGC +
Preference number: 4 (lower is better)
Translates to: FLQGSDPFGWWRRSGLLAFYLHP*NLHIPC
Trigger: GCATGGTATGTGCAAATTCCAGGGATGGAGATAAAA...TGCTAGCAGTCCACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CCA 90 bp CCTGAATTGATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATCAGCCTTTGTCAGGCTaGCAACAAATACCACTTCTG +
Preference number: 4 (lower is better)
Translates to: PELILTGPAPSQNTVSLYQPLSG*QQIPLL
Trigger: CAGAAGTGGTATTTGTTGCCAGCCTGACAAAGGCTG...ATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATCAATTCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CCA 90 bp GCCTGCAGTGCTTTGGAAACCAAGGCAACATCATCGGTGAAAAGCAAAACTCTCCAGAGTCAGAATGACTaGCATTGGGATTCCGTACAT +
Preference number: 4 (lower is better)
Translates to: ACSALETKATSSVKSKTLQSQND*HWDSVH
Trigger: ATGTACGGAATCCCAATGCCAGTCATTCTGACTCTG...GAGAGTTTTGCTTTTCACCGATGATGTTGCCTTGGTTTCCAAAGCACTGCAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR CCA 90 bp TGCCTGACAAACTTTCTGGCCAAAATGGAAGGCACTCTGAAGAAGCAATATAGTCCAATTCTCCTGACGTaGACTGACAGGTCGACTGTC +
Preference number: 4 (lower is better)
Translates to: CLTNFLAKMEGTLKKQYSPILLT*TDRSTV
Trigger: GACAGTCGACCTGTCAGTCCACGTCAGGAGAATTGG...ACTATATTGCTTCTTCAGAGTGCCTTCCATTTTGGCCAGAAAGTTTGTCAGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR CCA 90 bp GATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATATGCCTTATCTTCTGAACGATACTaGAGAACCCGGGTAGTCTTG +
Preference number: 4 (lower is better)
Translates to: DSHRACSLTEHSVIIYALSSERY*RTRVVL
Trigger: CAAGACTACCCGGGTTCTCCAGTATCGTTCAGAAGA...TAAGGCATATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CCA 90 bp CCTGAATTGATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATGGTACTCCATATTGTTaGCAGGACACTTCACACACC +
Preference number: 4 (lower is better)
Translates to: PELILTGPAPSQNTVSLYGTPYC*QDTSHT
Trigger: GGTGTGTGAAGTGTCCTGCCAACAATATGGAGTACC...ATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATCAATTCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CCA 90 bp GATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATATGCCTTACTGCCTGCAGTGCTTTaGAAACCAAGGCAACATCAT +
Preference number: 4 (lower is better)
Translates to: DSHRACSLTEHSVIIYALLPAVL*KPRQHH
Trigger: ATGATGTTGCCTTGGTTTCCAAAGCACTGCAGGCAG...TAAGGCATATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CCA 90 bp TCTCTGAGAAAAGGGCAAGCGAGCACTTTCAGATCTCTCACAGAAGCTTCCATCTGTCTCCAAAATCTCTaGGCTGTCGACTCAACTCTT +
Preference number: 4 (lower is better)
Translates to: SLRKGQASTFRSLTEASICLQNL*AVDSTL
Trigger: AAGAGTTGAGTCGACAGCCCAGAGATTTTGGAGACA...GATGGAAGCTTCTGTGAGAGATCTGAAAGTGCTCGCTTGCCCTTTTCTCAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR CCA 90 bp TCGTTTAATAGGGCTACGAATAGGGAGGCGCATTTCCATTGGATCTTTATCAAAATGATGCCATCTTCATaGATCAGGCGAGGGGGACGG +
Preference number: 4 (lower is better)
Translates to: SFNRATNREAHFHWIFIKMMPSS*IRRGGR
Trigger: CCGTCCCCCTCGCCTGATCCATGAAGATGGCATCAT...TTTGATAAAGATCCAATGGAAATGCGCCTCCCTATTCGTAGCCCTATTAAACGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR TCA 90 bp GATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATATGCCTTACAAAGGAAGTCCTCCTaGCACTTTAAATCTGGCCAT +
Preference number: 4 (lower is better)
Translates to: DSHRACSLTEHSVIIYALQRKSS*HFKSGH
Trigger: ATGGCCAGATTTAAAGTGTCAGGAGGACTTCCTTTG...TAAGGCATATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp TTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGGACTGCTAGCATTTCGTTGCAAACAATaGCACAGAAAGCATTCAACT +
Preference number: 4 (lower is better)
Translates to: FLQGSDPFGWWRRSGLLAFRCKQ*HRKHST
Trigger: AGTTGAATGCTTTCTGTGTCATTGTTTGCAACGAAA...TGCTAGCAGTCCACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp TTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGGACTGCTAGCAATCATGTACATCTTGTaGTATAGAGATTTCAAGGGG +
Preference number: 4 (lower is better)
Translates to: FLQGSDPFGWWRRSGLLAIMYIL*YRDFKG
Trigger: CCCCTTGAAATCTCTATATCACAAGATGTACATGAT...TGCTAGCAGTCCACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR TCA 90 bp TTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGGACTGCTAGCACTCCAGATTCCTGGTTaGTATCATTGTTATAAAGGA +
Preference number: 4 (lower is better)
Translates to: FLQGSDPFGWWRRSGLLALQIPG*YHCYKG
Trigger: TCCTTTATAACAATGATATCAACCAGGAATCTGGAG...TGCTAGCAGTCCACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR TCA 90 bp CTCTCACACAAAGTTTGCCTGACAAACTTTCTGGCCAAAATGGAAGGCACTCTGCCACTTCTGGATCTGTaGTCATGGCCTTTAAAGTCA +
Preference number: 4 (lower is better)
Translates to: LSHKVCLTNFLAKMEGTLPLLDL*SWPLKS
Trigger: TGACTTTAAAGGCCATGATCACAGATCCAGAAGTGG...CAGAGTGCCTTCCATTTTGGCCAGAAAGTTTGTCAGGCAAACTTTGTGTGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR TCA 90 bp TTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGGACTGCTAGCAAATGTTCAATGCCTTTaGAGCTTTCCGTTATTTCTG +
Preference number: 4 (lower is better)
Translates to: FLQGSDPFGWWRRSGLLANVQCL*SFPLFL
Trigger: CAGAAATAACGGAAAGCTTCAAAGGCATTGAACATT...TGCTAGCAGTCCACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR TCA 90 bp TCGTTGACTGTGCATCCTCAATGGCATTACATGCTCTCTCTGCTGTGGCGGTGTAGCAAACTTTTATCCTaGACTGGGTTCTTCTTTACA +
Preference number: 4 (lower is better)
Translates to: SLTVHPQWHYMLSLLWRCSKLLS*TGFFFT
Trigger: TGTAAAGAAGAACCCAGTTCAGGATAAAAGTTTGCT...ACACCGCCACAGCAGAGAGAGCATGTAATGCCATTGAGGATGCACAGTCAACGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR TCA 90 bp CCTGAATTGATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATGGAAGCCCATTACTCTaGGATTACAATTGGGCTTCA +
Preference number: 4 (lower is better)
Translates to: PELILTGPAPSQNTVSLYGSPLL*DYNWAS
Trigger: TGAAGCCCAATTGTAATCTCAGAGTAATGGGCTTCC...ATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATCAATTCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp GATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATATGCCTTAGGAAGCCCATTACTCTaGGATTACAATTGGGCTTCA +
Preference number: 4 (lower is better)
Translates to: DSHRACSLTEHSVIIYALGSPLL*DYNWAS
Trigger: TGAAGCCCAATTGTAATCTCAGAGTAATGGGCTTCC...TAAGGCATATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp GATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATATGCCTTAATAGATAGGTTCCCTTaGCTTGAAGGTACCATGCTG +
Preference number: 4 (lower is better)
Translates to: DSHRACSLTEHSVIIYALIDRFP*LEGTML
Trigger: CAGCATGGTACCTTCAAGTCAAGGGAACCTATCTAT...TAAGGCATATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp CCTGAATTGATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATGTACAATGGTCAGAGTaGAGAAGGAGCTTTCTTGAC +
Preference number: 4 (lower is better)
Translates to: PELILTGPAPSQNTVSLYVQWSE*RRSFLD
Trigger: GTCAAGAAAGCTCCTTCTTCACTCTGACCATTGTAC...ATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATCAATTCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp CCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCCATCCTTCTGCCAGCTCATaGGTTTCTGCTGTTCCCTCA +
Preference number: 4 (lower is better)
Translates to: PLSHINKNRANQACPHLHPSASS*VSAVPS
Trigger: TGAGGGAACAGCAGAAACTCATGAGCTGGCAGAAGG...ATGGAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp CTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCAAGAATGTTAACTCTCCTGACGTGGACTaGCAGGTCGACTGTCGTCAC +
Preference number: 4 (lower is better)
Translates to: LPLVTFLHSITWFTKNVNSPDVD*QVDCRH
Trigger: GTGACGACAGTCGACCTGTCAGTCCACGTCAGGAGA...GTTAACATTCTTGGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR TCA 90 bp GTAACAGTATCTGCTTCTGAGCTCAATAAAGGCTTTCATCTATTAAACGCAGAATCTCCTGACGTGGACTaGCAGGTCGACTGTCGTCAC +
Preference number: 4 (lower is better)
Translates to: VTVSASELNKGFHLLNAESPDVD*QVDCRH
Trigger: GTGACGACAGTCGACCTGTCAGTCCACGTCAGGAGA...TTCTGCGTTTAATAGATGAAAGCCTTTATTGAGCTCAGAAGCAGATACTGTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000645819.1
ENST00000649766.1
CDS-3UTR TCA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGGGCTGCCAATTCTCCTaGCGTGGACTGACAGGTCGA +
Preference number: 4 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRGCQFS*RGLTGR
Trigger: TCGACCTGTCAGTCCACGTCAGGAGAATTGGCAGCC...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR TCA 90 bp GTAACAGTATCTGCTTCTGAGCTCAATAAAGGCTTTCATCTATTAAACGCAGAAGGCTGCCAATTCTCCTaGCGTGGACTGACAGGTCGA +
Preference number: 4 (lower is better)
Translates to: VTVSASELNKGFHLLNAEGCQFS*RGLTGR
Trigger: TCGACCTGTCAGTCCACGTCAGGAGAATTGGCAGCC...TTCTGCGTTTAATAGATGAAAGCCTTTATTGAGCTCAGAAGCAGATACTGTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000645819.1
ENST00000649766.1
CDS-3UTR TCA 90 bp CTTGACATCCACGACAAAAACTACCAAGTCCTCTCATTAGTGTATAATCATTCTGGCTGCCAATTCTCCTaGCGTGGACTGACAGGTCGA +
Preference number: 4 (lower is better)
Translates to: LDIHDKNYQVLSLVYNHSGCQFS*RGLTGR
Trigger: TCGACCTGTCAGTCCACGTCAGGAGAATTGGCAGCC...AGAATGATTATACACTAATGAGAGGACTTGGTAGTTTTTGTCGTGGATGTCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000645819.1
ENST00000649766.1
CDS-3UTR TCA 90 bp TCTCTGAGAAAAGGGCAAGCGAGCACTTTCAGATCTCTCACAGAAGCTTCCATCCAGGGTAACTATTCGTaGAAGGTTGAAACTGCTCAT +
Preference number: 4 (lower is better)
Translates to: SLRKGQASTFRSLTEASIQGNYS*KVETAH
Trigger: ATGAGCAGTTTCAACCTTTCACGAATAGTTACCCTG...GATGGAAGCTTCTGTGAGAGATCTGAAAGTGCTCGCTTGCCCTTTTCTCAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR TCA 90 bp TTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGGACTGCTAGCATTTAAGGCCATTTCCTaGATGAGGACCATAAAATAC +
Preference number: 4 (lower is better)
Translates to: FLQGSDPFGWWRRSGLLAFKAIS*MRTIKY
Trigger: GTATTTTATGGTCCTCATTCAGGAAATGGCCTTAAA...TGCTAGCAGTCCACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR TCA 90 bp CCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCCATAATTCTTCAGGGCCTTaGACAGCACCCTGGAAGGGT +
Preference number: 4 (lower is better)
Translates to: PLSHINKNRANQACPHLHNSSGP*TAPWKG
Trigger: ACCCTTCCAGGGTGCTGTTCAAGGCCCTGAAGAATT...ATGGAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp TGCCTGACAAACTTTCTGGCCAAAATGGAAGGCACTCTGAAGAAGCAATATAGTGATTCTGCTGCCCTCTaGATGCCTTGGAAGGTACTA +
Preference number: 4 (lower is better)
Translates to: CLTNFLAKMEGTLKKQYSDSAAL*MPWKVL
Trigger: TAGTACCTTCCAAGGCATTCAGAGGGCAGCAGAATC...ACTATATTGCTTCTTCAGAGTGCCTTCCATTTTGGCCAGAAAGTTTGTCAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR TCA 90 bp CCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCCATTTGCTGCTGTCTCGTTaGCTGTGCATCCTCAATGGC +
Preference number: 4 (lower is better)
Translates to: PLSHINKNRANQACPHLHLLLSR*LCILNG
Trigger: GCCATTGAGGATGCACAGTCAACGAGACAGCAGCAA...ATGGAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp TTTGAAGTGACGTTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTATATATGAACTCCCCTaGATGTGTGCCTTTTTCTGC +
Preference number: 4 (lower is better)
Translates to: FEVTFLQGSDPFGWWRRSIYELP*MCAFFC
Trigger: GCAGAAAAAGGCACACATTCAGGGGAGTTCATATAT...ACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAACGTCACTTCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644861.2
CDS-3UTR GCA 90 bp CTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCAAGAATGTTAACCATTTCCGCCCCAGATaGCCAGCTTCAGCTGGGACT +
Preference number: 4 (lower is better)
Translates to: LPLVTFLHSITWFTKNVNHFRPR*PASAGT
Trigger: AGTCCCAGCTGAAGCTGGGCATCTGGGGCGGAAATG...GTTAACATTCTTGGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR GCA 90 bp CTTGACATCCACGACAAAAACTACCAAGTCCTCTCATTAGTGTATAATCATTCTCATTTCCGCCCCAGATaGCCAGCTTCAGCTGGGACT +
Preference number: 4 (lower is better)
Translates to: LDIHDKNYQVLSLVYNHSHFRPR*PASAGT
Trigger: AGTCCCAGCTGAAGCTGGGCATCTGGGGCGGAAATG...AGAATGATTATACACTAATGAGAGGACTTGGTAGTTTTTGTCGTGGATGTCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR GCA 90 bp TTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGGACTGCTAGCATTTTTCCTTAATTTTTaGCCAGACCGAATCACCTCA +
Preference number: 4 (lower is better)
Translates to: FLQGSDPFGWWRRSGLLAFFLNF*PDRITS
Trigger: TGAGGTGATTCGGTCTGGGCAAAAATTAAGGAAAAA...TGCTAGCAGTCCACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR GCA 90 bp TTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGGACTGCTAGCAATATGGGCAACATACTaGTTAGGTAAAGTTAGGTTG +
Preference number: 4 (lower is better)
Translates to: FLQGSDPFGWWRRSGLLAIWATY*LGKVRL
Trigger: CAACCTAACTTTACCTAAGCAGTATGTTGCCCATAT...TGCTAGCAGTCCACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR GCA 90 bp CCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCCATCGCTTCTACCTTAAGTaGTTGTGCTCCTGGTCGCTG +
Preference number: 4 (lower is better)
Translates to: PLSHINKNRANQACPHLHRFYLK*LCSWSL
Trigger: CAGCGACCAGGAGCACAAGCACTTAAGGTAGAAGCG...ATGGAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR GCA 90 bp TTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGGACTGCTAGCAAAGATCTACCACTACTaGATTGGTGGAAATAGAAGA +
Preference number: 4 (lower is better)
Translates to: FLQGSDPFGWWRRSGLLAKIYHY*IGGNRR
Trigger: TCTTCTATTTCCACCAATGCAGTAGTGGTAGATCTT...TGCTAGCAGTCCACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR GCA 90 bp GATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATATGCCTTATTGACAGAGAAAGGTTaGACTGAAACGAGGCTGTCA +
Preference number: 4 (lower is better)
Translates to: DSHRACSLTEHSVIIYALLTEKG*TETRLS
Trigger: TGACAGCCTCGTTTCAGTGCAACCTTTCTCTGTCAA...TAAGGCATATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR GCA 90 bp CTCTCACACAAAGTTTGCCTGACAAACTTTCTGGCCAAAATGGAAGGCACTCTGTTGACAGAGAAAGGTTaGACTGAAACGAGGCTGTCA +
Preference number: 4 (lower is better)
Translates to: LSHKVCLTNFLAKMEGTLLTEKG*TETRLS
Trigger: TGACAGCCTCGTTTCAGTGCAACCTTTCTCTGTCAA...CAGAGTGCCTTCCATTTTGGCCAGAAAGTTTGTCAGGCAAACTTTGTGTGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR GCA 90 bp TTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGGACTGCTAGCAAATAAAGAACAGGGCTaGAAGACTGTGGTAATGTTT +
Preference number: 4 (lower is better)
Translates to: FLQGSDPFGWWRRSGLLANKEQG*KTVVMF
Trigger: AAACATTACCACAGTCTTGCAGCCCTGTTCTTTATT...TGCTAGCAGTCCACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR GCA 90 bp CCTGAATTGATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATGTCCATTCCAGTTTTTaGCCTGGTATTTCACCAGGA +
Preference number: 4 (lower is better)
Translates to: PELILTGPAPSQNTVSLYVHSSF*PGISPG
Trigger: TCCTGGTGAAATACCAGGGCAAAAACTGGAATGGAC...ATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATCAATTCAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR GCA 90 bp TTTGAAGTGACGTTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGTAGTGTATCACGTATaGGGAAATGTCCATTCCAGT +
Preference number: 4 (lower is better)
Translates to: FEVTFLQGSDPFGWWRRSVVYHV*GNVHSS
Trigger: ACTGGAATGGACATTTCCGCATACGTGATACACTAC...ACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAACGTCACTTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR GCA 90 bp CTCTCACACAAAGTTTGCCTGACAAACTTTCTGGCCAAAATGGAAGGCACTCTGCTCTCACACAAAGTTTaGCTGACAAACTTTCTGGCC +
Preference number: 4 (lower is better)
Translates to: LSHKVCLTNFLAKMEGTLLSHKV*LTNFLA
Trigger: GGCCAGAAAGTTTGTCAGGCAAACTTTGTGTGAGAG...CAGAGTGCCTTCCATTTTGGCCAGAAAGTTTGTCAGGCAAACTTTGTGTGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR GCA 90 bp TTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGGACTGCTAGCATTCCCCAACATTTGCTaGATATGTCCATGTAAGTTT +
Preference number: 4 (lower is better)
Translates to: FLQGSDPFGWWRRSGLLAFPNIC*ICPCKF
Trigger: AAACTTACATGGACATATGCAGCAAATGTTGGGGAA...TGCTAGCAGTCCACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR GCA 90 bp GATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATATGCCTTATCCATTTCTTCTGCCTaGAGTGCTTTGGAAACCAAG +
Preference number: 4 (lower is better)
Translates to: DSHRACSLTEHSVIIYALSISSA*SALETK
Trigger: CTTGGTTTCCAAAGCACTGCAGGCAGAAGAAATGGA...TAAGGCATATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR GCA 90 bp CCTGAATTGATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATTCCATTTCTTCTGCCTaGAGTGCTTTGGAAACCAAG +
Preference number: 4 (lower is better)
Translates to: PELILTGPAPSQNTVSLYSISSA*SALETK
Trigger: CTTGGTTTCCAAAGCACTGCAGGCAGAAGAAATGGA...ATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATCAATTCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR GCA 90 bp CCGTCCAGGTCTGGCCACAGGGATATTTGCAACTTCTGTATATCCATGAGGTACTTCATCAATTTTTGCTaGTGTCTCGTTGACTGTGCA +
Preference number: 4 (lower is better)
Translates to: PSRSGHRDICNFCISMRYFINFC*CLVDCA
Trigger: TGCACAGTCAACGAGACAGCAGCAAAAATTGATGAA...GTACCTCATGGATATACAGAAGTTGCAAATATCCCTGTGGCCAGACCTGGACGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR GCA 90 bp CCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCCATGATTCTCACAGGGCCTaGTCCCTCACAGAACACAGT +
Preference number: 4 (lower is better)
Translates to: PLSHINKNRANQACPHLHDSHRA*SLTEHS
Trigger: ACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATC...ATGGAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CCA 90 bp GATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATATGCCTTATCTGACTTTTCATGGTaGAAACCCGTCTGTGGAACT +
Preference number: 4 (lower is better)
Translates to: DSHRACSLTEHSVIIYALSDFSW*KPVCGT
Trigger: AGTTCCACAGACGGGTTTCCACCATGAAAAGTCAGA...TAAGGCATATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CCA 90 bp GATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATATGCCTTAAGATCTGACTTTTCATaGTGGAAACCCGTCTGTGGA +
Preference number: 4 (lower is better)
Translates to: DSHRACSLTEHSVIIYALRSDFS*WKPVCG
Trigger: TCCACAGACGGGTTTCCACCATGAAAAGTCAGATCT...TAAGGCATATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CCA 90 bp TTTGAAGTGACGTTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTCAAATGTTCTCATTGTaGCCTCTGTTCCTAACTGAG +
Preference number: 4 (lower is better)
Translates to: FEVTFLQGSDPFGWWRRSQMFSL*PLFLTE
Trigger: CTCAGTTAGGAACAGAGGCCACAATGAGAACATTTG...ACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAACGTCACTTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CCA 90 bp TTTGAAGTGACGTTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTACACGAAAACTCCTCTaGGCAAGATCTTTCACACTT +
Preference number: 4 (lower is better)
Translates to: FEVTFLQGSDPFGWWRRSTRKLL*ARSFTL
Trigger: AAGTGTGAAAGATCTTGCCCAGAGGAGTTTTCGTGT...ACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAACGTCACTTCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CCA 90 bp CCTGAATTGATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATGGAAATAGAAGACTGTaGGATGACTATAACCGGTGC +
Preference number: 4 (lower is better)
Translates to: PELILTGPAPSQNTVSLYGNRRL*DDYNRC
Trigger: GCACCGGTTATAGTCATCCCACAGTCTTCTATTTCC...ATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATCAATTCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CCA 90 bp TCGTTGACTGTGCATCCTCAATGGCATTACATGCTCTCTCTGCTGTGGCGGTGTCAGCCTTTTTGTGAATaGACTGCAAATCTACATTCA +
Preference number: 4 (lower is better)
Translates to: SLTVHPQWHYMLSLLWRCQPFCE*TANLHS
Trigger: TGAATGTAGATTTGCAGTCCATTCACAAAAAGGCTG...ACACCGCCACAGCAGAGAGAGCATGTAATGCCATTGAGGATGCACAGTCAACGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR CCA 90 bp CCTGAATTGATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATGTTTGCCGTCTACTTTaGACATATCAGCATAGGCCT +
Preference number: 4 (lower is better)
Translates to: PELILTGPAPSQNTVSLYVCRLL*TYQHRP
Trigger: AGGCCTATGCTGATATGTCCAAAGTAGACGGCAAAC...ATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATCAATTCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CCA 90 bp GCAAAACTCTCTGGCGCCCATCCAGAAATGATACCCAGTGTATCTGGATGTTTGTGGAGACTGACAATCTaGTTCATAGAGAGCTTTGAG +
Preference number: 4 (lower is better)
Translates to: AKLSGAHPEMIPSVSGCLWRLTI*FIESFE
Trigger: CTCAAAGCTCTCTATGAACCAGATTGTCAGTCTCCA...CAAACATCCAGATACACTGGGTATCATTTCTGGATGGGCGCCAGAGAGTTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR CCA 90 bp TTTGAAGTGACGTTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTTTGAAGGTACCATGCTaGCATACTCCAGTTCCAAAT +
Preference number: 4 (lower is better)
Translates to: FEVTFLQGSDPFGWWRRSLKVPC*HTPVPN
Trigger: ATTTGGAACTGGAGTATGCCAGCATGGTACCTTCAA...ACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAACGTCACTTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CCA 90 bp GCCTGCAGTGCTTTGGAAACCAAGGCAACATCATCGGTGAAAAGCAAAACTCTCTTGAAGGTACCATGCTaGCATACTCCAGTTCCAAAT +
Preference number: 4 (lower is better)
Translates to: ACSALETKATSSVKSKTLLKVPC*HTPVPN
Trigger: ATTTGGAACTGGAGTATGCCAGCATGGTACCTTCAA...GAGAGTTTTGCTTTTCACCGATGATGTTGCCTTGGTTTCCAAAGCACTGCAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR CCA 90 bp CCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCCATATCGCCGTCCAGGTCTaGCCACAGGGATATTTGCAA +
Preference number: 4 (lower is better)
Translates to: PLSHINKNRANQACPHLHIAVQV*PQGYLQ
Trigger: TTGCAAATATCCCTGTGGCCAGACCTGGACGGCGAT...ATGGAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CCA 90 bp CCTGAATTGATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATCAGAGTCAGAATGACTaGCATTGGGATTCCGTACAT +
Preference number: 4 (lower is better)
Translates to: PELILTGPAPSQNTVSLYQSQND*HWDSVH
Trigger: ATGTACGGAATCCCAATGCCAGTCATTCTGACTCTG...ATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATCAATTCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CCA 90 bp GCCTGCAGTGCTTTGGAAACCAAGGCAACATCATCGGTGAAAAGCAAAACTCTCGAATCTAAAGGAACATaGAACTCCTCTTCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: ACSALETKATSSVKSKTLESKGT*NSSSGL
Trigger: CAGACCTGAAGAGGAGTTCCATGTTCCTTTAGATTC...GAGAGTTTTGCTTTTCACCGATGATGTTGCCTTGGTTTCCAAAGCACTGCAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR CCA 90 bp CCTGAATTGATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATCCAATGAGAAACTACTaGACCAGGCACTGGTTGAAA +
Preference number: 4 (lower is better)
Translates to: PELILTGPAPSQNTVSLYPMRNY*TRHWLK
Trigger: TTTCAACCAGTGCCTGGTCCAGTAGTTTCTCATTGG...ATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATCAATTCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CCA 90 bp CACTCTCTCAATCAGTGGCTCCCAGACAGCATGGATCTCATTGTAATAGTGCACATGACTTGTTTGCAATaGTACAAAAGGGAGTCAGGG +
Preference number: 4 (lower is better)
Translates to: HSLNQWLPDSMDLIVIVHMTCLQ*YKRESG
Trigger: CCCTGACTCCCTTTTGTACCATTGCAAACAAGTCAT...GTGCACTATTACAATGAGATCCATGCTGTCTGGGAGCCACTGATTGAGAGAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR CCA 90 bp TTTGAAGTGACGTTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGAAAGCCCAAGACTGTaGAGAGACAAGGTTATTTCA +
Preference number: 4 (lower is better)
Translates to: FEVTFLQGSDPFGWWRRSESPRL*RDKVIS
Trigger: TGAAATAACCTTGTCTCTCCACAGTCTTGGGCTTTC...ACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAACGTCACTTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CCA 90 bp TTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGGACTGCTAGCAGAGGCGCATTTCCATTaGATCTTTATCAAAATTGAC +
Preference number: 4 (lower is better)
Translates to: FLQGSDPFGWWRRSGLLAEAHFH*IFIKID
Trigger: GTCAATTTTGATAAAGATCCAATGGAAATGCGCCTC...TGCTAGCAGTCCACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CCA 90 bp GATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATATGCCTTATGTCTCCAAAATCTCTaGGCTGTCGACTCAACTCTT +
Preference number: 4 (lower is better)
Translates to: DSHRACSLTEHSVIIYALCLQNL*AVDSTL
Trigger: AAGAGTTGAGTCGACAGCCCAGAGATTTTGGAGACA...TAAGGCATATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CCA 90 bp CTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCAAGAATGTTAACTACGATTCCACCAGTTaGACGGGCCACAGCACCCAC +
Preference number: 4 (lower is better)
Translates to: LPLVTFLHSITWFTKNVNYDSTS*TGHSTH
Trigger: GTGGGTGCTGTGGCCCGTCCAACTGGTGGAATCGTA...GTTAACATTCTTGGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CCA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTACGATTCCACCAGTTaGACGGGCCACAGCACCCAC +
Preference number: 4 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRYDSTS*TGHSTH
Trigger: GTGGGTGCTGTGGCCCGTCCAACTGGTGGAATCGTA...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CCA 90 bp GATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATATGCCTTAACTGTGCATCCTCAATaGCATTACATGCTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: DSHRACSLTEHSVIIYALTVHPQ*HYMLSL
Trigger: CAGAGAGAGCATGTAATGCCATTGAGGATGCACAGT...TAAGGCATATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CCA 90 bp GAACCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCGACCCATTTGGGTGGTaGCGTAGAAGTGGACTGCTA +
Preference number: 4 (lower is better)
Translates to: EPLSHINKNRANQACPHLDPFGW*RRSGLL
Trigger: TAGCAGTCCACTTCTACGCCACCACCCAAATGGGTC...GAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
3UTR CAA 72 bp TATACAATCGCCGTCCAGGTCTGGCCACAGGGATATTaGCAACTTCTGTATATCCATGAGGTACAATGGTCA +
Preference number: 4 (lower is better)
Translates to: YTIAVQVWPQGY*QLLYIHEVQWS
Trigger: TGACCATTGTACCTCATGGATATACAGAAGTTGCAAATATCCCTGTGGCCAGACCTGGACGGCGATTGTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR CAA 72 bp TTGGAGGGGCAACAGGATGAAATACAACAGGGAACATaGCACCTGGTAACTGATTATCAACCTGAAGCCAGT +
Preference number: 4 (lower is better)
Translates to: LEGQQDEIQQGT*HLVTDYQPEAS
Trigger: ACTGGCTTCAGGTTGATAATCAGTTACCAGGTGCAATGTTCCCTGTTGTATTTCATCCTGTTGCCCCTCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR TCA 90 bp CCTGAATTGATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATTTTTCTGCTGCTTTTTaGAGGGCTTCTTCAATTCGG +
Preference number: 4 (lower is better)
Translates to: PELILTGPAPSQNTVSLYFSAAF*RASSIR
Trigger: CCGAATTGAAGAAGCCCTTCAAAAAGCAGCAGAAAA...ATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATCAATTCAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp GATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATATGCCTTATTTTCTGCTGCTTTTTaGAGGGCTTCTTCAATTCGG +
Preference number: 4 (lower is better)
Translates to: DSHRACSLTEHSVIIYALFSAAF*RASSIR
Trigger: CCGAATTGAAGAAGCCCTTCAAAAAGCAGCAGAAAA...TAAGGCATATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp GAACCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCCAGTGTGACACCAAATaGAAGAGGCCGCTTTGGATC +
Preference number: 4 (lower is better)
Translates to: EPLSHINKNRANQACPHLQCDTK*KRPLWI
Trigger: GATCCAAAGCGGCCTCTTTCATTTGGTGTCACACTG...GAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp GATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATATGCCTTAGAGTTTTGCAGAGGCTaGTATTGGCTGGAAAATGTA +
Preference number: 4 (lower is better)
Translates to: DSHRACSLTEHSVIIYALEFCRG*YWLENV
Trigger: TACATTTTCCAGCCAATATCAGCCTCTGCAAAACTC...TAAGGCATATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp CCTGAATTGATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATCCAGTCCTTGAATCTTaGTTTCGGCGATATTGTTCT +
Preference number: 4 (lower is better)
Translates to: PELILTGPAPSQNTVSLYPVLES*FRRYCS
Trigger: AGAACAATATCGCCGAAATCAAGATTCAAGGACTGG...ATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATCAATTCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp GATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATATGCCTTACCAGTCCTTGAATCTTaGTTTCGGCGATATTGTTCT +
Preference number: 4 (lower is better)
Translates to: DSHRACSLTEHSVIIYALPVLES*FRRYCS
Trigger: AGAACAATATCGCCGAAATCAAGATTCAAGGACTGG...TAAGGCATATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp TTTGAAGTGACGTTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGAAGAGTTAATAATGTaGAGAGGTTCCCCTTTAGAG +
Preference number: 4 (lower is better)
Translates to: FEVTFLQGSDPFGWWRRSEELIM*RGSPLE
Trigger: CTCTAAAGGGGAACCTCTTCACATTATTAACTCTTC...ACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAACGTCACTTCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR TCA 90 bp TCTCTGAGAAAAGGGCAAGCGAGCACTTTCAGATCTCTCACAGAAGCTTCCATCGAAGAGTTAATAATGTaGAGAGGTTCCCCTTTAGAG +
Preference number: 4 (lower is better)
Translates to: SLRKGQASTFRSLTEASIEELIM*RGSPLE
Trigger: CTCTAAAGGGGAACCTCTTCACATTATTAACTCTTC...GATGGAAGCTTCTGTGAGAGATCTGAAAGTGCTCGCTTGCCCTTTTCTCAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR TCA 90 bp CCTGAATTGATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATGAGACAGCCTTTTTGTaGATGGACTGCAAATCTACA +
Preference number: 4 (lower is better)
Translates to: PELILTGPAPSQNTVSLYETAFL*MDCKST
Trigger: TGTAGATTTGCAGTCCATTCACAAAAAGGCTGTCTC...ATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATCAATTCAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp GATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATATGCCTTACTTGACAGCTTCAACTaGGTGAGTTCGATGTTCATT +
Preference number: 4 (lower is better)
Translates to: DSHRACSLTEHSVIIYALLDSFN*VSSMFI
Trigger: AATGAACATCGAACTCACTCAGTTGAAGCTGTCAAG...TAAGGCATATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp GATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATATGCCTTACTGCAAAATAGTTCTTaGCAGCTTCAACTGAGTGAG +
Preference number: 4 (lower is better)
Translates to: DSHRACSLTEHSVIIYALLQNSS*QLQLSE
Trigger: CTCACTCAGTTGAAGCTGTCAAGAACTATTTTGCAG...TAAGGCATATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp TCTCTGAGAAAAGGGCAAGCGAGCACTTTCAGATCTCTCACAGAAGCTTCCATCTGGAAACTGTCATTATaGAATGCAACTCCAGATTCC +
Preference number: 4 (lower is better)
Translates to: SLRKGQASTFRSLTEASIWKLSL*NATPDS
Trigger: GGAATCTGGAGTTGCATTTCATAATGACAGTTTCCA...GATGGAAGCTTCTGTGAGAGATCTGAAAGTGCTCGCTTGCCCTTTTCTCAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR TCA 90 bp CCTGAATTGATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATACATTTTCTGGACTCTaGGGCACAGCTTTGATAAAG +
Preference number: 4 (lower is better)
Translates to: PELILTGPAPSQNTVSLYTFSGL*GTALIK
Trigger: CTTTATCAAAGCTGTGCCTCAGAGTCCAGAAAATGT...ATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATCAATTCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp ACTGTACTCATTAAATCTTGTGATGACACTCACATCAATGAAAGGCTTGGGCTCTCCCTCTCTTTTCTCTaGGAAAAGGGCAAGCGAGCA +
Preference number: 4 (lower is better)
Translates to: TVLIKSCDDTHINERLGLSLSFL*EKGKRA
Trigger: TGCTCGCTTGCCCTTTTCTCAGAGAAAAGAGAGGGA...GAGCCCAAGCCTTTCATTGATGTGAGTGTCATCACAAGATTTAATGAGTACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR TCA 90 bp TTTGAAGTGACGTTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGAAGATTCCGCAAAGTaGGAGAAGGATAAAGATGAA +
Preference number: 4 (lower is better)
Translates to: FEVTFLQGSDPFGWWRRSEDSAK*EKDKDE
Trigger: TTCATCTTTATCCTTCTCTCACTTTGCGGAATCTTC...ACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAACGTCACTTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR TCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAATCTCCTGACGTGGACTaGCAGGTCGACTGTCGTCAC +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKSPDVD*QVDCRH
Trigger: GTGACGACAGTCGACCTGTCAGTCCACGTCAGGAGA...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR TCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTTCTCCTGACGTGGACTaGCAGGTCGACTGTCGTCAC +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFSPDVD*QVDCRH
Trigger: GTGACGACAGTCGACCTGTCAGTCCACGTCAGGAGA...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR TCA 90 bp TTTGAAGTGACGTTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGCTGGATGTTTCACATaGATATCTTCTGAACGATAC +
Preference number: 4 (lower is better)
Translates to: FEVTFLQGSDPFGWWRRSAGCFT*ISSERY
Trigger: GTATCGTTCAGAAGATATTCATGTGAAACATCCAGC...ACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAACGTCACTTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR TCA 90 bp GATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATATGCCTTACAGGGTAACTATTCGTaGAAGGTTGAAACTGCTCAT +
Preference number: 4 (lower is better)
Translates to: DSHRACSLTEHSVIIYALQGNYS*KVETAH
Trigger: ATGAGCAGTTTCAACCTTTCACGAATAGTTACCCTG...TAAGGCATATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp TTTGAAGTGACGTTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTCCAGCCATGGTCTCTTaGTATTTGATGTTTCTGATA +
Preference number: 4 (lower is better)
Translates to: FEVTFLQGSDPFGWWRRSPAMVS*YLMFLI
Trigger: TATCAGAAACATCAAATATCAAGAGACCATGGCTGG...ACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAACGTCACTTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp TTTGAAGTGACGTTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGCTCCTAGAAACCCTTaGTCAATTTTTAAGGCCATT +
Preference number: 4 (lower is better)
Translates to: FEVTFLQGSDPFGWWRRSAPRNP*SIFKAI
Trigger: AATGGCCTTAAAAATTGATCAAGGGTTTCTAGGAGC...ACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAACGTCACTTCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR TCA 90 bp CCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCCATTCCCAACAGAACCGGTaGTTCGAGATACAACTCCTG +
Preference number: 4 (lower is better)
Translates to: PLSHINKNRANQACPHLHSQQNR*FEIQLL
Trigger: CAGGAGTTGTATCTCGAATCACCGGTTCTGTTGGGA...ATGGAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp CTCTCACACAAAGTTTGCCTGACAAACTTTCTGGCCAAAATGGAAGGCACTCTGTGTCATAAGGACGAATaGTGCCATCTTCATGGATCA +
Preference number: 4 (lower is better)
Translates to: LSHKVCLTNFLAKMEGTLCHKDE*CHLHGS
Trigger: TGATCCATGAAGATGGCATCATTCGTCCTTATGACA...CAGAGTGCCTTCCATTTTGGCCAGAAAGTTTGTCAGGCAAACTTTGTGTGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR TCA 90 bp AATACAAAATCTTCAAATGGACATTGCCAGTCTACACACATAAGGCCCAGGATTTTGCTGCTGTCTCGTTaGCTGTGCATCCTCAATGGC +
Preference number: 4 (lower is better)
Translates to: NTKSSNGHCQSTHIRPRILLLSR*LCILNG
Trigger: GCCATTGAGGATGCACAGTCAACGAGACAGCAGCAA...AATCCTGGGCCTTATGTGTGTAGACTGGCAATGTCCATTTGAAGATTTTGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR TCA 90 bp TTTGAAGTGACGTTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTCAAGATAAAGCAGAGTaGCTTATAGACAAGACCAGT +
Preference number: 4 (lower is better)
Translates to: FEVTFLQGSDPFGWWRRSQDKAE*LIDKTS
Trigger: ACTGGTCTTGTCTATAAGTCACTCTGCTTTATCTTG...ACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAACGTCACTTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR GCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTCATTTCCGCCCCAGATaGCCAGCTTCAGCTGGGACT +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFHFRPR*PASAGT
Trigger: AGTCCCAGCTGAAGCTGGGCATCTGGGGCGGAAATG...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR GCA 90 bp TTTGAAGTGACGTTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGATGGCACAATATCCTaGTGTCTCAAACCTGTTATA +
Preference number: 4 (lower is better)
Translates to: FEVTFLQGSDPFGWWRRSDGTIS*CLKPVI
Trigger: TATAACAGGTTTGAGACAGCAGGATATTGTGCCATC...ACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAACGTCACTTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR GCA 90 bp TTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGGACTGCTAGCAACAAGAGCTTGTGTTTaGAGCAACAGATTTAAAGAT +
Preference number: 4 (lower is better)
Translates to: FLQGSDPFGWWRRSGLLATRACV*SNRFKD
Trigger: ATCTTTAAATCTGTTGCTGCAAACACAAGCTCTTGT...TGCTAGCAGTCCACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR GCA 90 bp GAACCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCTATCAGGATGGTAGATaGCTGGCTGGATCACTGTCC +
Preference number: 4 (lower is better)
Translates to: EPLSHINKNRANQACPHLYQDGR*LAGSLS
Trigger: GGACAGTGATCCAGCCAGGCATCTACCATCCTGATA...GAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR GCA 90 bp CCTGAATTGATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATGCTTCCATTCCAAGTTaGAGGACATTTAGCTCATGT +
Preference number: 4 (lower is better)
Translates to: PELILTGPAPSQNTVSLYASIPS*RTFSSC
Trigger: ACATGAGCTAAATGTCCTGCAACTTGGAATGGAAGC...ATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATCAATTCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR GCA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGGGAAGCAGCTCTTTCTaGAGCCTGGACTGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRGSSSF*SLDCGC
Trigger: ACAGCCACAGTCCAGGCTGCAGAAAGAGCTGCTTCC...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR GCA 90 bp CTTCCATCATCTGTTCGAGTTTGGATGTTGACAGAGAAAGGTTGCACTGAAACGTGTGGCAAGCTAGCCTaGAAAATAGTTCTTGACAGC +
Preference number: 4 (lower is better)
Translates to: LPSSVRVWMLTEKGCTETCGKLA*KIVLDS
Trigger: GCTGTCAAGAACTATTTTGCAGGCTAGCTTGCCACA...CGTTTCAGTGCAACCTTTCTCTGTCAACATCCAAACTCGAACAGATGATGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR GCA 90 bp GCAAAACTCTCTGGCGCCCATCCAGAAATGATACCCAGTGTATCTGGATGTTTGTGTTTTTGGAGACAATaGAGCCATGATTGTCAACAC +
Preference number: 4 (lower is better)
Translates to: AKLSGAHPEMIPSVSGCLCFWRQ*SHDCQH
Trigger: GTGTTGACAATCATGGCTGCATTGTCTCCAAAAACA...CAAACATCCAGATACACTGGGTATCATTTCTGGATGGGCGCCAGAGAGTTTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR GCA 90 bp TTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGGACTGCTAGCATTTATTCCCTTCAGTTaGATCAATTTGTACCAAGAC +
Preference number: 4 (lower is better)
Translates to: FLQGSDPFGWWRRSGLLAFIPFS*INLYQD
Trigger: GTCTTGGTACAAATTGATGCAACTGAAGGGAATAAA...TGCTAGCAGTCCACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR GCA 90 bp CCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCCATGAACATCAGCAGTACTaGCTTCTGCCAGCTCATGAG +
Preference number: 4 (lower is better)
Translates to: PLSHINKNRANQACPHLHEHQQY*LLPAHE
Trigger: CTCATGAGCTGGCAGAAGGCAGTACTGCTGATGTTC...ATGGAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR GCA 90 bp GATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATATGCCTTACTTGTCCATTGTAATTaGTGCCAAACCTTTCCCAAC +
Preference number: 4 (lower is better)
Translates to: DSHRACSLTEHSVIIYALLVHCN*CQTFPN
Trigger: GTTGGGAAAGGTTTGGCAGCAATTACAATGGACAAG...TAAGGCATATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR GCA 90 bp TTTGAAGTGACGTTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTTCTTCAAATGGACATTaGCAGTCTACACACATAAGG +
Preference number: 4 (lower is better)
Translates to: FEVTFLQGSDPFGWWRRSSSNGH*QSTHIR
Trigger: CCTTATGTGTGTAGACTGGCAATGTCCATTTGAAGA...ACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAACGTCACTTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR GCA 90 bp GAACCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCATTACATGCTCTCTCTaGTGTGGCGGTGTCCTTCAG +
Preference number: 4 (lower is better)
Translates to: EPLSHINKNRANQACPHLITCSL*CGGVLQ
Trigger: CTGAAGGACACCGCCACAGCAGAGAGAGCATGTAAT...GAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR GCA 90 bp CCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCCATATTACATGCTCTCTCTaGTGTGGCGGTGTCCTTCAG +
Preference number: 4 (lower is better)
Translates to: PLSHINKNRANQACPHLHITCSL*CGGVLQ
Trigger: CTGAAGGACACCGCCACAGCAGAGAGAGCATGTAAT...ATGGAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR GCA 90 bp GATACCCCAAAGATTTTCCATTTCCTTAGACGTATCTTTGGATCCATCTTCTTTCCGAGAGGCAGAGATTaGAGTGAGCCAAGATCGCAC +
Preference number: 4 (lower is better)
Translates to: DTPKIFHFLRRIFGSIFFPRGRD*SEPRSH
Trigger: GTGCGATCTTGGCTCACTGCAATCTCTGCCTCTCGG...AAAGAAGATGGATCCAAAGATACGTCTAAGGAAATGGAAAATCTTTGGGGTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR GCA 90 bp GATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATATGCCTTATGTGCCTTTTTCTGCTaGTTTTTGAAGGGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: DSHRACSLTEHSVIIYALCAFFC*FLKGFF
Trigger: GAAGAAGCCCTTCAAAAAGCAGCAGAAAAAGGCACA...TAAGGCATATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000644861.2
CDS-3UTR GCA 90 bp GATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATATGCCTTAATGTGTGCCTTTTTCTaGTGCTTTTTGAAGGGCTTC +
Preference number: 4 (lower is better)
Translates to: DSHRACSLTEHSVIIYALMCAFF*CFLKGF
Trigger: GAAGCCCTTCAAAAAGCAGCAGAAAAAGGCACACAT...TAAGGCATATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000644861.2
CDS-3UTR CCA 90 bp TTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGGACTGCTAGCACTTATGAACTGTCTTTaGATCAACATCTGTGACAAT +
Preference number: 4 (lower is better)
Translates to: FLQGSDPFGWWRRSGLLALMNCL*INICDN
Trigger: ATTGTCACAGATGTTGATCCAAAGACAGTTCATAAG...TGCTAGCAGTCCACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CCA 90 bp TTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGGACTGCTAGCAAATAGTTTTAAATTCTaGTCCATCACTGTCTGCCTT +
Preference number: 4 (lower is better)
Translates to: FLQGSDPFGWWRRSGLLANSFKF*SITVCL
Trigger: AAGGCAGACAGTGATGGACCAGAATTTAAAACTATT...TGCTAGCAGTCCACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CCA 90 bp CCTGAATTGATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATTCCTTCTGTGGCATCTaGATAAAGAGTCAGTTGGAA +
Preference number: 4 (lower is better)
Translates to: PELILTGPAPSQNTVSLYSFCGI*IKSQLE
Trigger: TTCCAACTGACTCTTTATCCAGATGCCACAGAAGGA...ATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATCAATTCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CCA 90 bp CTTCCATCATCTGTTCGAGTTTGGATGTTGACAGAGAAAGGTTGCACTGAAACGGTTTGCCGTCTACTTTaGACATATCAGCATAGGCCT +
Preference number: 4 (lower is better)
Translates to: LPSSVRVWMLTEKGCTETVCRLL*TYQHRP
Trigger: AGGCCTATGCTGATATGTCCAAAGTAGACGGCAAAC...CGTTTCAGTGCAACCTTTCTCTGTCAACATCCAAACTCGAACAGATGATGGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR CCA 90 bp TCGTTTAATAGGGCTACGAATAGGGAGGCGCATTTCCATTGGATCTTTATCAAACTGCAGCCTGGACTGTaGCTGTACTCAAAGCTTCTT +
Preference number: 4 (lower is better)
Translates to: SFNRATNREAHFHWIFIKLQPGL*LYSKLL
Trigger: AAGAAGCTTTGAGTACAGCCACAGTCCAGGCTGCAG...TTTGATAAAGATCCAATGGAAATGCGCCTCCCTATTCGTAGCCCTATTAAACGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR CCA 90 bp TTTGAAGTGACGTTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTTTTTATCTCCATCCCTaGAATTTGCACATACCATGC +
Preference number: 4 (lower is better)
Translates to: FEVTFLQGSDPFGWWRRSFYLHP*NLHIPC
Trigger: GCATGGTATGTGCAAATTCCAGGGATGGAGATAAAA...ACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAACGTCACTTCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CCA 90 bp CCTGAATTGATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATTGGAGACTGACAATCTaGTTCATAGAGAGCTTTGAG +
Preference number: 4 (lower is better)
Translates to: PELILTGPAPSQNTVSLYWRLTI*FIESFE
Trigger: CTCAAAGCTCTCTATGAACCAGATTGTCAGTCTCCA...ATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATCAATTCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CCA 90 bp TTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGGACTGCTAGCAATCTTCTTTTGTTTTTaGAGACAATGCAGCCATGAT +
Preference number: 4 (lower is better)
Translates to: FLQGSDPFGWWRRSGLLAIFFCF*RQCSHD
Trigger: ATCATGGCTGCATTGTCTCCAAAAACAAAAGAAGAT...TGCTAGCAGTCCACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CCA 90 bp CCTGAATTGATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATGAATCTAAAGGAACATaGAACTCCTCTTCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: PELILTGPAPSQNTVSLYESKGT*NSSSGL
Trigger: CAGACCTGAAGAGGAGTTCCATGTTCCTTTAGATTC...ATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATCAATTCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CCA 90 bp TTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGGACTGCTAGCATACTGGACCAGGCACTaGTTGAAATTTTTAATTGTA +
Preference number: 4 (lower is better)
Translates to: FLQGSDPFGWWRRSGLLAYWTRH*LKFLIV
Trigger: TACAATTAAAAATTTCAACCAGTGCCTGGTCCAGTA...TGCTAGCAGTCCACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CCA 90 bp CCTGAATTGATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATATGTCCCATGGTGTATaGTTCATTATCAAGGCAGGT +
Preference number: 4 (lower is better)
Translates to: PELILTGPAPSQNTVSLYMSHGV*FIIKAG
Trigger: ACCTGCCTTGATAATGAACCATACACCATGGGACAT...ATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATCAATTCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CCA 90 bp TTTGAAGTGACGTTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTTGTGAGGATGTCCCATaGTGTATGGTTCATTATCAA +
Preference number: 4 (lower is better)
Translates to: FEVTFLQGSDPFGWWRRSCEDVP*CMVHYQ
Trigger: TTGATAATGAACCATACACCATGGGACATCCTCACA...ACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAACGTCACTTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CCA 90 bp GCCTGCAGTGCTTTGGAAACCAAGGCAACATCATCGGTGAAAAGCAAAACTCTCGATACCCAGTGTATCTaGATGTTTGCATCATATGGA +
Preference number: 4 (lower is better)
Translates to: ACSALETKATSSVKSKTLDTQCI*MFASYG
Trigger: TCCATATGATGCAAACATCCAGATACACTGGGTATC...GAGAGTTTTGCTTTTCACCGATGATGTTGCCTTGGTTTCCAAAGCACTGCAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR CCA 90 bp GATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATATGCCTTAAAAAGCAAAACTCTCTaGCGCCCATCCAGAAATGAT +
Preference number: 4 (lower is better)
Translates to: DSHRACSLTEHSVIIYALKSKTL*RPSRND
Trigger: ATCATTTCTGGATGGGCGCCAGAGAGTTTTGCTTTT...TAAGGCATATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CCA 90 bp TTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGGACTGCTAGCAAAACAACACCAGAACTaGTTATCCCAATATAGGAAA +
Preference number: 4 (lower is better)
Translates to: FLQGSDPFGWWRRSGLLAKQHQN*LSQYRK
Trigger: TTTCCTATATTGGGATAACCAGTTCTGGTGTTGTTT...TGCTAGCAGTCCACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CCA 90 bp GATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATATGCCTTACTTCCATTTCTGCTTTaGTTTCACCTCCCAAACAAC +
Preference number: 4 (lower is better)
Translates to: DSHRACSLTEHSVIIYALLPFLL*FHLPNN
Trigger: GTTGTTTGGGAGGTGAAACCAAAGCAGAAATGGAAG...TAAGGCATATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CCA 90 bp TTTGAAGTGACGTTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTTTCAGGGTCTGTTGTTaGGGTAAACAGTGCAATAAT +
Preference number: 4 (lower is better)
Translates to: FEVTFLQGSDPFGWWRRSFRVCC*GKQCNN
Trigger: ATTATTGCACTGTTTACCCCAACAACAGACCCTGAA...ACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAACGTCACTTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTTACGATTCCACCAGTTaGACGGGCCACAGCACCCAC +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFYDSTS*TGHSTH
Trigger: GTGGGTGCTGTGGCCCGTCCAACTGGTGGAATCGTA...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAATACGATTCCACCAGTTaGACGGGCCACAGCACCCAC +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKYDSTS*TGHSTH
Trigger: GTGGGTGCTGTGGCCCGTCCAACTGGTGGAATCGTA...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CCA 90 bp AACATGTCATTTCTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCATGATGCCATCTTCATaGATCAGGCGAGGGGGACGG +
Preference number: 4 (lower is better)
Translates to: NMSFLPLVTFLHSITWFTMMPSS*IRRGGR
Trigger: CCGTCCCCCTCGCCTGATCCATGAAGATGGCATCAT...GGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAGAAATGACATGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR TCA 90 bp TTTGAAGTGACGTTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTTTTTATGTTACTCCATaGCCACATCTGTGTATACCT +
Preference number: 4 (lower is better)
Translates to: FEVTFLQGSDPFGWWRRSFYVTP*PHLCIP
Trigger: AGGTATACACAGATGTGGTCATGGAGTAACATAAAA...ACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAACGTCACTTCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp CCTGAATTGATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATATAGTTGATGGATGCTaGAATCGACACTTTTTCCAG +
Preference number: 4 (lower is better)
Translates to: PELILTGPAPSQNTVSLYIVDGC*NRHFFQ
Trigger: CTGGAAAAAGTGTCGATTTCAGCATCCATCAACTAT...ATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATCAATTCAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp TTTGAAGTGACGTTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTCAGGAAGTTCAGAAGTaGCATAAGGAATTTATGAAG +
Preference number: 4 (lower is better)
Translates to: FEVTFLQGSDPFGWWRRSQEVQK*HKEFMK
Trigger: CTTCATAAATTCCTTATGTCACTTCTGAACTTCCTG...ACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAACGTCACTTCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp CACTCTCTCAATCAGTGGCTCCCAGACAGCATGGATCTCATTGTAATAGTGCACATCATGTACATCTTGTaGTATAGAGATTTCAAGGGG +
Preference number: 4 (lower is better)
Translates to: HSLNQWLPDSMDLIVIVHIMYIL*YRDFKG
Trigger: CCCCTTGAAATCTCTATATCACAAGATGTACATGAT...GTGCACTATTACAATGAGATCCATGCTGTCTGGGAGCCACTGATTGAGAGAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR TCA 90 bp CCTGAATTGATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATGAAGAGTTAATAATGTaGAGAGGTTCCCCTTTAGAG +
Preference number: 4 (lower is better)
Translates to: PELILTGPAPSQNTVSLYEELIM*RGSPLE
Trigger: CTCTAAAGGGGAACCTCTTCACATTATTAACTCTTC...ATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATCAATTCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp TTTGAAGTGACGTTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGGTGATACTGAAGACTaGGGAATAATAATAACTGGT +
Preference number: 4 (lower is better)
Translates to: FEVTFLQGSDPFGWWRRSGDTED*GIIITG
Trigger: ACCAGTTATTATTATTCCTCAGTCTTCAGTATCACC...ACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAACGTCACTTCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR TCA 90 bp TCTCTGAGAAAAGGGCAAGCGAGCACTTTCAGATCTCTCACAGAAGCTTCCATCGGTGATACTGAAGACTaGGGAATAATAATAACTGGT +
Preference number: 4 (lower is better)
Translates to: SLRKGQASTFRSLTEASIGDTED*GIIITG
Trigger: ACCAGTTATTATTATTCCTCAGTCTTCAGTATCACC...GATGGAAGCTTCTGTGAGAGATCTGAAAGTGCTCGCTTGCCCTTTTCTCAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR TCA 90 bp CACTCTCTCAATCAGTGGCTCCCAGACAGCATGGATCTCATTGTAATAGTGCACACTTGTTTTCAACTCTaGTTAAACCCAGATCTGCTA +
Preference number: 4 (lower is better)
Translates to: HSLNQWLPDSMDLIVIVHTCFQL*LNPDLL
Trigger: TAGCAGATCTGGGTTTAATCAGAGTTGAAAACAAGT...GTGCACTATTACAATGAGATCCATGCTGTCTGGGAGCCACTGATTGAGAGAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR TCA 90 bp CCTGAATTGATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATATGGTCAGGTACACTTaGAACATCAACTTTTCTCAC +
Preference number: 4 (lower is better)
Translates to: PELILTGPAPSQNTVSLYMVRYT*NINFSH
Trigger: GTGAGAAAAGTTGATGTTTCAAGTGTACCTGACCAT...ATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATCAATTCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp GATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATATGCCTTAAATCTTCTTGTTCTTTaGGATGGTCAGGTACACTTG +
Preference number: 4 (lower is better)
Translates to: DSHRACSLTEHSVIIYALNLLVL*DGQVHL
Trigger: CAAGTGTACCTGACCATCTCAAAGAACAAGAAGATT...TAAGGCATATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp CCTGAATTGATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATAATCTTCTTGTTCTTTaGGATGGTCAGGTACACTTG +
Preference number: 4 (lower is better)
Translates to: PELILTGPAPSQNTVSLYNLLVL*DGQVHL
Trigger: CAAGTGTACCTGACCATCTCAAAGAACAAGAAGATT...ATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATCAATTCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp CCTGAATTGATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATTGGAAACTGTCATTATaGAATGCAACTCCAGATTCC +
Preference number: 4 (lower is better)
Translates to: PELILTGPAPSQNTVSLYWKLSL*NATPDS
Trigger: GGAATCTGGAGTTGCATTTCATAATGACAGTTTCCA...ATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATCAATTCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp TTTGAAGTGACGTTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTTATATTTTGCTTTCCTaGAGCCCACGTACATTTTTC +
Preference number: 4 (lower is better)
Translates to: FEVTFLQGSDPFGWWRRSYILLS*SPRTFF
Trigger: GAAAAATGTACGTGGGCTTCAGGAAAGCAAAATATA...ACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAACGTCACTTCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR TCA 90 bp CCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCCATAAGACAGAGTCAGAATaGCTGGCATTGGGATTCCGT +
Preference number: 4 (lower is better)
Translates to: PLSHINKNRANQACPHLHKTESE*LALGFR
Trigger: ACGGAATCCCAATGCCAGTCATTCTGACTCTGTCTT...ATGGAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp GAACCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCAAGACAGAGTCAGAATaGCTGGCATTGGGATTCCGT +
Preference number: 4 (lower is better)
Translates to: EPLSHINKNRANQACPHLKTESE*LALGFR
Trigger: ACGGAATCCCAATGCCAGTCATTCTGACTCTGTCTT...GAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp GATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATATGCCTTAGTAGATTCTTTGTACTaGTGCTCTAAGATTCCAGCT +
Preference number: 4 (lower is better)
Translates to: DSHRACSLTEHSVIIYALVDSLY*CSKIPA
Trigger: AGCTGGAATCTTAGAGCATCAGTACAAAGAATCTAC...TAAGGCATATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp CCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCCATACTGCAACATGCATCTaGCTTCCCTGCTCCTATGAA +
Preference number: 4 (lower is better)
Translates to: PLSHINKNRANQACPHLHTATCI*LPCSYE
Trigger: TTCATAGGAGCAGGGAAGTCAGATGCATGTTGCAGT...ATGGAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp GAACCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCACTGCAACATGCATCTaGCTTCCCTGCTCCTATGAA +
Preference number: 4 (lower is better)
Translates to: EPLSHINKNRANQACPHLTATCI*LPCSYE
Trigger: TTCATAGGAGCAGGGAAGTCAGATGCATGTTGCAGT...GAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp GAACCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCGAAGCTGACTTCTACTaGTGGACACTGCAACATGCA +
Preference number: 4 (lower is better)
Translates to: EPLSHINKNRANQACPHLEADFY*WTLQHA
Trigger: TGCATGTTGCAGTGTCCATCAGTAGAAGTCAGCTTC...GAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp CCTGAATTGATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATGAAGATTCCGCAAAGTaGGAGAAGGATAAAGATGAA +
Preference number: 4 (lower is better)
Translates to: PELILTGPAPSQNTVSLYEDSAK*EKDKDE
Trigger: TTCATCTTTATCCTTCTCTCACTTTGCGGAATCTTC...ATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATCAATTCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGCCTTCTGCCAGCTCATaGGTTTCTGCTGTTCCCTCA +
Preference number: 4 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRPSASS*VSAVPS
Trigger: TGAGGGAACAGCAGAAACTCATGAGCTGGCAGAAGG...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR TCA 90 bp CCTGAATTGATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATCCATTATTTCACCACTaGTTCTCGAATGCAGAACAT +
Preference number: 4 (lower is better)
Translates to: PELILTGPAPSQNTVSLYPLFHH*FSNAEH
Trigger: ATGTTCTGCATTCGAGAATCAGTGGTGAAATAATGG...ATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATCAATTCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp CCTGAATTGATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATAAATGGAAGGCACTCTaGAGAAGCAATATAGTTCCA +
Preference number: 4 (lower is better)
Translates to: PELILTGPAPSQNTVSLYKWKAL*RSNIVP
Trigger: TGGAACTATATTGCTTCTTCAGAGTGCCTTCCATTT...ATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATCAATTCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp GATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATATGCCTTAAAATGGAAGGCACTCTaGAGAAGCAATATAGTTCCA +
Preference number: 4 (lower is better)
Translates to: DSHRACSLTEHSVIIYALKWKAL*RSNIVP
Trigger: TGGAACTATATTGCTTCTTCAGAGTGCCTTCCATTT...TAAGGCATATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp CACTCTCTCAATCAGTGGCTCCCAGACAGCATGGATCTCATTGTAATAGTGCACAAAAGTTATGACAGTTaGATGTTCGGCAGTGTTTAC +
Preference number: 4 (lower is better)
Translates to: HSLNQWLPDSMDLIVIVHKSYDS*MFGSVY
Trigger: GTAAACACTGCCGAACATTCAACTGTCATAACTTTT...GTGCACTATTACAATGAGATCCATGCTGTCTGGGAGCCACTGATTGAGAGAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR TCA 90 bp TCTCTGAGAAAAGGGCAAGCGAGCACTTTCAGATCTCTCACAGAAGCTTCCATCAATCAGAAAAAGTTATaGCAGTTGAATGTTCGGCAG +
Preference number: 4 (lower is better)
Translates to: SLRKGQASTFRSLTEASINQKKL*QLNVRQ
Trigger: CTGCCGAACATTCAACTGTCATAACTTTTTCTGATT...GATGGAAGCTTCTGTGAGAGATCTGAAAGTGCTCGCTTGCCCTTTTCTCAGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR TCA 90 bp CCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCCATGGAGGGGCAACAGGATaGAATACAACAGGGAACATT +
Preference number: 4 (lower is better)
Translates to: PLSHINKNRANQACPHLHGGATG*NTTGNI
Trigger: AATGTTCCCTGTTGTATTTCATCCTGTTGCCCCTCC...ATGGAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp GAACCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCGGAGGGGCAACAGGATaGAATACAACAGGGAACATT +
Preference number: 4 (lower is better)
Translates to: EPLSHINKNRANQACPHLGGATG*NTTGNI
Trigger: AATGTTCCCTGTTGTATTTCATCCTGTTGCCCCTCC...GAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp TTTGAAGTGACGTTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTTTTAAGGCCATTTCCTaGATGAGGACCATAAAATAC +
Preference number: 4 (lower is better)
Translates to: FEVTFLQGSDPFGWWRRSFKAIS*MRTIKY
Trigger: GTATTTTATGGTCCTCATTCAGGAAATGGCCTTAAA...ACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAACGTCACTTCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR TCA 90 bp TTTGAAGTGACGTTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTTTTTCAACAGCAAGTTaGCAGAATGAACTGCAAACA +
Preference number: 4 (lower is better)
Translates to: FEVTFLQGSDPFGWWRRSFSTAS*QNELQT
Trigger: TGTTTGCAGTTCATTCTGTCAACTTGCTGTTGAAAA...ACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAACGTCACTTCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR TCA 90 bp CTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCAAGAATGTTAACAATTCTTCAGGGCCTTaGACAGCACCCTGGAAGGGT +
Preference number: 4 (lower is better)
Translates to: LPLVTFLHSITWFTKNVNNSSGP*TAPWKG
Trigger: ACCCTTCCAGGGTGCTGTTCAAGGCCCTGAAGAATT...GTTAACATTCTTGGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR TCA 90 bp CCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCCATATGGCAATTGGGGTCTaGGAAGTCTCACTGATGACT +
Preference number: 4 (lower is better)
Translates to: PLSHINKNRANQACPHLHMAIGV*EVSLMT
Trigger: AGTCATCAGTGAGACTTCTCAGACCCCAATTGCCAT...ATGGAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR GCA 90 bp GATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATATGCCTTAATCATACTTAATACTTaGTCCAGGGACAACAAGCAG +
Preference number: 4 (lower is better)
Translates to: DSHRACSLTEHSVIIYALIILNT*SRDNKQ
Trigger: CTGCTTGTTGTCCCTGGAGCAAGTATTAAGTATGAT...TAAGGCATATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR GCA 90 bp TTTGAAGTGACGTTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTCTTATCTTTTTCTGCTaGTTTTTGAAGGGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: FEVTFLQGSDPFGWWRRSLIFFC*FLKGFF
Trigger: GAAGAAGCCCTTCAAAAAGCAGCAGAAAAAGATAAG...ACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAACGTCACTTCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000249837.7
CDS-3UTR GCA 90 bp TTTGAAGTGACGTTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTTTTTTCCTTAATTTTTaGCCAGACCGAATCACCTCA +
Preference number: 4 (lower is better)
Translates to: FEVTFLQGSDPFGWWRRSFFLNF*PDRITS
Trigger: TGAGGTGATTCGGTCTGGGCAAAAATTAAGGAAAAA...ACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAACGTCACTTCAAA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR GCA 90 bp AACATGTCATTTCTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCCGCTTCTACCTTAAGTaGTTGTGCTCCTGGTCGCTG +
Preference number: 4 (lower is better)
Translates to: NMSFLPLVTFLHSITWFTRFYLK*LCSWSL
Trigger: CAGCGACCAGGAGCACAAGCACTTAAGGTAGAAGCG...GGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAGAAATGACATGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR GCA 90 bp GTAACAGTATCTGCTTCTGAGCTCAATAAAGGCTTTCATCTATTAAACGCAGAACGCTTCTACCTTAAGTaGTTGTGCTCCTGGTCGCTG +
Preference number: 4 (lower is better)
Translates to: VTVSASELNKGFHLLNAERFYLK*LCSWSL
Trigger: CAGCGACCAGGAGCACAAGCACTTAAGGTAGAAGCG...TTCTGCGTTTAATAGATGAAAGCCTTTATTGAGCTCAGAAGCAGATACTGTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR GCA 90 bp CCTGAATTGATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATTCAGAAATTCTCACATaGATCAAAGGAAGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: PELILTGPAPSQNTVSLYSEILT*IKGSPP
Trigger: AGGAGGACTTCCTTTGATGCATGTGAGAATTTCTGA...ATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATCAATTCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR GCA 90 bp ACCATAATACACTTTAGAAAACTTGTCTTCAGCACTACTAAAAACCCACTACACGGAAGCAGCTCTTTCTaGAGCCTGGACTGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: TIIHFRKLVFSTTKNPLHGSSSF*SLDCGC
Trigger: ACAGCCACAGTCCAGGCTGCAGAAAGAGCTGCTTCC...GTGTAGTGGGTTTTTAGTAGTGCTGAAGACAAGTTTTCTAAAGTGTATTATGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR GCA 90 bp GAACCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCTCCATCCCTGGAATTTaGACATACCATGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: EPLSHINKNRANQACPHLSIPGI*TYHAAA
Trigger: AGCAGCAGCATGGTATGTGCAAATTCCAGGGATGGA...GAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR GCA 90 bp CCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCCATTCCATCCCTGGAATTTaGACATACCATGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: PLSHINKNRANQACPHLHSIPGI*TYHAAA
Trigger: AGCAGCAGCATGGTATGTGCAAATTCCAGGGATGGA...ATGGAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR GCA 90 bp GCCTGCAGTGCTTTGGAAACCAAGGCAACATCATCGGTGAAAAGCAAAACTCTCAATCATTCTCGATGTTaGTCTCTCAATTCCTTCTCT +
Preference number: 4 (lower is better)
Translates to: ACSALETKATSSVKSKTLNHSRC*SLNSFS
Trigger: AGAGAAGGAATTGAGAGAGCAACATCGAGAATGATT...GAGAGTTTTGCTTTTCACCGATGATGTTGCCTTGGTTTCCAAAGCACTGCAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR GCA 90 bp CACTCTCTCAATCAGTGGCTCCCAGACAGCATGGATCTCATTGTAATAGTGCACAATAAAGAACAGGGCTaGAAGACTGTGGTAATGTTT +
Preference number: 4 (lower is better)
Translates to: HSLNQWLPDSMDLIVIVHNKEQG*KTVVMF
Trigger: AAACATTACCACAGTCTTGCAGCCCTGTTCTTTATT...GTGCACTATTACAATGAGATCCATGCTGTCTGGGAGCCACTGATTGAGAGAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR GCA 90 bp TGCCTGACAAACTTTCTGGCCAAAATGGAAGGCACTCTGAAGAAGCAATATAGTTCTACTGATGGACACTaGAACATGCATCTGACTTCC +
Preference number: 4 (lower is better)
Translates to: CLTNFLAKMEGTLKKQYSSTDGH*NMHLTS
Trigger: GGAAGTCAGATGCATGTTGCAGTGTCCATCAGTAGA...ACTATATTGCTTCTTCAGAGTGCCTTCCATTTTGGCCAGAAAGTTTGTCAGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR GCA 90 bp TTTGAAGTGACGTTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTCTAAGCTCAATAAAGTaGCATTATCCTGTCGGTTAT +
Preference number: 4 (lower is better)
Translates to: FEVTFLQGSDPFGWWRRSLSSIK*HYPVGY
Trigger: ATAACCGACAGGATAATGGCACTTTATTGAGCTTAG...ACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAACGTCACTTCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR GCA 90 bp AACATGTCATTTCTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCGGTACCAGTAGGATCTaGCCAGGCAAAAAGTCGAGC +
Preference number: 4 (lower is better)
Translates to: NMSFLPLVTFLHSITWFTGTSRI*PGKKSS
Trigger: GCTCGACTTTTTGCCTGGGCAGATCCTACTGGTACC...GGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAGAAATGACATGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR GCA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGGGTACCAGTAGGATCTaGCCAGGCAAAAAGTCGAGC +
Preference number: 4 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRGTSRI*PGKKSS
Trigger: GCTCGACTTTTTGCCTGGGCAGATCCTACTGGTACC...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR GCA 90 bp GATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATATGCCTTAGTGTATCTGGATGTTTaGATCATATGGAAACTGTCC +
Preference number: 4 (lower is better)
Translates to: DSHRACSLTEHSVIIYALVYLDV*IIWKLS
Trigger: GGACAGTTTCCATATGATGCAAACATCCAGATACAC...TAAGGCATATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR GCA 90 bp GAACCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCTTCTTCTGCCTGCAGTaGTTTGGAAACCAAGGCAAC +
Preference number: 4 (lower is better)
Translates to: EPLSHINKNRANQACPHLFFCLQ*FGNQGN
Trigger: GTTGCCTTGGTTTCCAAAGCACTGCAGGCAGAAGAA...GAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR GCA 90 bp GATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATATGCCTTAAGTCTCACTGATGACTaGTTCATCAATTTTTGCTGC +
Preference number: 4 (lower is better)
Translates to: DSHRACSLTEHSVIIYALSLTDD*FINFCC
Trigger: GCAGCAAAAATTGATGAAGCAGTCATCAGTGAGACT...TAAGGCATATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CCA 90 bp CCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCCATAAGTGCTTGTGCTCCTaGTCGCTGAGATACTTGAGT +
Preference number: 4 (lower is better)
Translates to: PLSHINKNRANQACPHLHKCLCS*SLRYLS
Trigger: ACTCAAGTATCTCAGCGACCAGGAGCACAAGCACTT...ATGGAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CCA 90 bp GATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATATGCCTTAACTTTTACAAGTCTGTaGTTCTCCATCTTCAGCATC +
Preference number: 4 (lower is better)
Translates to: DSHRACSLTEHSVIIYALTFTSL*FSIFSI
Trigger: GATGCTGAAGATGGAGAACCACAGACTTGTAAAAGT...TAAGGCATATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CCA 90 bp GAACCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCACAACAGGCACCTTGTaGTACCAAGATGCAGCTAGA +
Preference number: 4 (lower is better)
Translates to: EPLSHINKNRANQACPHLTTGTL*YQDAAR
Trigger: TCTAGCTGCATCTTGGTACCACAAGGTGCCTGTTGT...GAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CCA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGGGACTCCCCCACAAGTaGTTTCAGCTCGGATTCCTT +
Preference number: 4 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRGLPHK*FQLGFL
Trigger: AAGGAATCCGAGCTGAAACCACTTGTGGGGGAGTCC...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CCA 90 bp CTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCAAGAATGTTAACGGACTCCCCCACAAGTaGTTTCAGCTCGGATTCCTT +
Preference number: 4 (lower is better)
Translates to: LPLVTFLHSITWFTKNVNGLPHK*FQLGFL
Trigger: AAGGAATCCGAGCTGAAACCACTTGTGGGGGAGTCC...GTTAACATTCTTGGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CCA 90 bp CTTGACATCCACGACAAAAACTACCAAGTCCTCTCATTAGTGTATAATCATTCTGGACTCCCCCACAAGTaGTTTCAGCTCGGATTCCTT +
Preference number: 4 (lower is better)
Translates to: LDIHDKNYQVLSLVYNHSGLPHK*FQLGFL
Trigger: AAGGAATCCGAGCTGAAACCACTTGTGGGGGAGTCC...AGAATGATTATACACTAATGAGAGGACTTGGTAGTTTTTGTCGTGGATGTCAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR CCA 90 bp CCGTCCAGGTCTGGCCACAGGGATATTTGCAACTTCTGTATATCCATGAGGTACGAACTGTTGTTATCTTaGTCATTCTTTCTGTCAATC +
Preference number: 4 (lower is better)
Translates to: PSRSGHRDICNFCISMRYELLLS*SFFLSI
Trigger: GATTGACAGAAAGAATGACCAAGATAACAACAGTTC...GTACCTCATGGATATACAGAAGTTGCAAATATCCCTGTGGCCAGACCTGGACGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR CCA 90 bp CCTGAATTGATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATTCAGAAATTCCACACTaGCACATACATACAGCTTGT +
Preference number: 4 (lower is better)
Translates to: PELILTGPAPSQNTVSLYSEIPH*HIHTAC
Trigger: ACAAGCTGTATGTATGTGCCAGTGTGGAATTTCTGA...ATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATCAATTCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CCA 90 bp GATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATATGCCTTATCAGAAATTCCACACTaGCACATACATACAGCTTGT +
Preference number: 4 (lower is better)
Translates to: DSHRACSLTEHSVIIYALSEIPH*HIHTAC
Trigger: ACAAGCTGTATGTATGTGCCAGTGTGGAATTTCTGA...TAAGGCATATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CCA 90 bp CCTGAATTGATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATTCATCTGTTCGAGTTTaGATGTTGACAGAGAAAGGT +
Preference number: 4 (lower is better)
Translates to: PELILTGPAPSQNTVSLYSSVRV*MLTEKG
Trigger: ACCTTTCTCTGTCAACATCCAAACTCGAACAGATGA...ATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATCAATTCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CCA 90 bp CTCTCACACAAAGTTTGCCTGACAAACTTTCTGGCCAAAATGGAAGGCACTCTGTCATCTGTTCGAGTTTaGATGTTGACAGAGAAAGGT +
Preference number: 4 (lower is better)
Translates to: LSHKVCLTNFLAKMEGTLSSVRV*MLTEKG
Trigger: ACCTTTCTCTGTCAACATCCAAACTCGAACAGATGA...CAGAGTGCCTTCCATTTTGGCCAGAAAGTTTGTCAGGCAAACTTTGTGTGAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR CCA 90 bp GTAACAGTATCTGCTTCTGAGCTCAATAAAGGCTTTCATCTATTAAACGCAGAAATCGCCGTCCAGGTCTaGCCACAGGGATATTTGCAA +
Preference number: 4 (lower is better)
Translates to: VTVSASELNKGFHLLNAEIAVQV*PQGYLQ
Trigger: TTGCAAATATCCCTGTGGCCAGACCTGGACGGCGAT...TTCTGCGTTTAATAGATGAAAGCCTTTATTGAGCTCAGAAGCAGATACTGTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CCA 90 bp CCTGAATTGATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATCAGAATGACTGGCATTaGGATTCCGTACATTATACA +
Preference number: 4 (lower is better)
Translates to: PELILTGPAPSQNTVSLYQNDWH*DSVHYT
Trigger: TGTATAATGTACGGAATCCCAATGCCAGTCATTCTG...ATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATCAATTCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CCA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGACTCCTCTTCAGGTCTaGCTATCCCAATGCGCTCCA +
Preference number: 4 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRTPLQV*LSQCAP
Trigger: TGGAGCGCATTGGGATAGCCAGACCTGAAGAGGAGT...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CCA 90 bp GTAACAGTATCTGCTTCTGAGCTCAATAAAGGCTTTCATCTATTAAACGCAGAAACTCCTCTTCAGGTCTaGCTATCCCAATGCGCTCCA +
Preference number: 4 (lower is better)
Translates to: VTVSASELNKGFHLLNAETPLQV*LSQCAP
Trigger: TGGAGCGCATTGGGATAGCCAGACCTGAAGAGGAGT...TTCTGCGTTTAATAGATGAAAGCCTTTATTGAGCTCAGAAGCAGATACTGTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CCA 90 bp GTAACAGTATCTGCTTCTGAGCTCAATAAAGGCTTTCATCTATTAAACGCAGAACCAATTCTCCTGACGTaGACTGACAGGTCGACTGTC +
Preference number: 4 (lower is better)
Translates to: VTVSASELNKGFHLLNAEPILLT*TDRSTV
Trigger: GACAGTCGACCTGTCAGTCCACGTCAGGAGAATTGG...TTCTGCGTTTAATAGATGAAAGCCTTTATTGAGCTCAGAAGCAGATACTGTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CCA 90 bp TCGTTTAATAGGGCTACGAATAGGGAGGCGCATTTCCATTGGATCTTTATCAAATCTTCTGAACGATACTaGAGAACCCGGGTAGTCTTG +
Preference number: 4 (lower is better)
Translates to: SFNRATNREAHFHWIFIKSSERY*RTRVVL
Trigger: CAAGACTACCCGGGTTCTCCAGTATCGTTCAGAAGA...TTTGATAAAGATCCAATGGAAATGCGCCTCCCTATTCGTAGCCCTATTAAACGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR CCA 90 bp CCTGAATTGATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATGATACCCAGTGTATCTaGATGTTTGCATCATATGGA +
Preference number: 4 (lower is better)
Translates to: PELILTGPAPSQNTVSLYDTQCI*MFASYG
Trigger: TCCATATGATGCAAACATCCAGATACACTGGGTATC...ATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATCAATTCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTATGATGCCATCTTCATaGATCAGGCGAGGGGGACGG +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFMMPSS*IRRGGR
Trigger: CCGTCCCCCTCGCCTGATCCATGAAGATGGCATCAT...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAAATGATGCCATCTTCATaGATCAGGCGAGGGGGACGG +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKMMPSS*IRRGGR
Trigger: CCGTCCCCCTCGCCTGATCCATGAAGATGGCATCAT...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
3UTR CAA 72 bp GTACAAAAGGGAGTCAGGGTAACTATTCGTGAAAGGTaGAAACTGCTCATTTTGATGCTAACACCAACCAGG +
Preference number: 4 (lower is better)
Translates to: VQKGVRVTIRER*KLLILMLTPTR
Trigger: CCTGGTTGGTGTTAGCATCAAAATGAGCAGTTTCAACCTTTCACGAATAGTTACCCTGACTCCCTTTTGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR CAA 72 bp GCCCATCCAGAAATGATACCCAGTGTATCTGGATGTTaGCATCATATGGAAACTGTCCACATCCATCCTTTA +
Preference number: 4 (lower is better)
Translates to: AHPEMIPSVSGC*HHMETVHIHPL
Trigger: TAAAGGATGGATGTGGACAGTTTCCATATGATGCAAACATCCAGATACACTGGGTATCATTTCTGGATGGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR TCA 90 bp AACATGTCATTTCTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCCAGTGTGACACCAAATaGAAGAGGCCGCTTTGGATC +
Preference number: 4 (lower is better)
Translates to: NMSFLPLVTFLHSITWFTQCDTK*KRPLWI
Trigger: GATCCAAAGCGGCCTCTTTCATTTGGTGTCACACTG...GGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAGAAATGACATGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp CCTGAATTGATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATATCATACTTAAGTACTaGGGTTTGGTCAGTTCAATG +
Preference number: 4 (lower is better)
Translates to: PELILTGPAPSQNTVSLYIILKY*GLVSSM
Trigger: CATTGAACTGACCAAACCTCAGTACTTAAGTATGAT...ATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATCAATTCAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp CCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCCATGAAGAGCTAATCAAGTaGAGGGGCTTCCTTTTGGAT +
Preference number: 4 (lower is better)
Translates to: PLSHINKNRANQACPHLHEELIK*RGFLLD
Trigger: ATCCAAAAGGAAGCCCCTTCACTTGATTAGCTCTTC...ATGGAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp CCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCCATGAGGAATCCAGTCCTTaGATCTTGATTTCGGCGATA +
Preference number: 4 (lower is better)
Translates to: PLSHINKNRANQACPHLHEESSP*ILISAI
Trigger: TATCGCCGAAATCAAGATTCAAGGACTGGATTCCTC...ATGGAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp GATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATATGCCTTACAGGAAGTTCAGAAGTaGCATAAGGAATTTATGAAG +
Preference number: 4 (lower is better)
Translates to: DSHRACSLTEHSVIIYALQEVQK*HKEFMK
Trigger: CTTCATAAATTCCTTATGTCACTTCTGAACTTCCTG...TAAGGCATATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp TGCCTGACAAACTTTCTGGCCAAAATGGAAGGCACTCTGAAGAAGCAATATAGTGAGACAGCCTTTTTGTaGATGGACTGCAAATCTACA +
Preference number: 4 (lower is better)
Translates to: CLTNFLAKMEGTLKKQYSETAFL*MDCKST
Trigger: TGTAGATTTGCAGTCCATTCACAAAAAGGCTGTCTC...ACTATATTGCTTCTTCAGAGTGCCTTCCATTTTGGCCAGAAAGTTTGTCAGGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR TCA 90 bp CCTGAATTGATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATACTTGTTTTCAACTCTaGTTAAACCCAGATCTGCTA +
Preference number: 4 (lower is better)
Translates to: PELILTGPAPSQNTVSLYTCFQL*LNPDLL
Trigger: TAGCAGATCTGGGTTTAATCAGAGTTGAAAACAAGT...ATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATCAATTCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp GAACCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCTCTCAATTCCTTCTCTaGGATCATCAAGGGTGCATG +
Preference number: 4 (lower is better)
Translates to: EPLSHINKNRANQACPHLSQFLL*DHQGCM
Trigger: CATGCACCCTTGATGATCTCAGAGAAGGAATTGAGA...GAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp AATACAAAATCTTCAAATGGACATTGCCAGTCTACACACATAAGGCCCAGGATTCATCTTTCTCTATCTTaGCCTTCCCTGTGGCAGTCT +
Preference number: 4 (lower is better)
Translates to: NTKSSNGHCQSTHIRPRIHLSLS*PSLWQS
Trigger: AGACTGCCACAGGGAAGGTCAAGATAGAGAAAGATG...AATCCTGGGCCTTATGTGTGTAGACTGGCAATGTCCATTTGAAGATTTTGTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR TCA 90 bp CTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCAAGAATGTTAACAGAGAAAGGTTGCACTaGAACGAGGCTGTCAGAGCA +
Preference number: 4 (lower is better)
Translates to: LPLVTFLHSITWFTKNVNRERLH*NEAVRA
Trigger: TGCTCTGACAGCCTCGTTTCAGTGCAACCTTTCTCT...GTTAACATTCTTGGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR TCA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGAGAGAAAGGTTGCACTaGAACGAGGCTGTCAGAGCA +
Preference number: 4 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRRERLH*NEAVRA
Trigger: TGCTCTGACAGCCTCGTTTCAGTGCAACCTTTCTCT...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR TCA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTCCCTCTCTTTTCTCTaGGAAAAGGGCAAGCGAGCA +
Preference number: 4 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRSLSFL*EKGKRA
Trigger: TGCTCGCTTGCCCTTTTCTCAGAGAAAAGAGAGGGA...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR TCA 90 bp AACATGTCATTTCTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCTCCCTCTCTTTTCTCTaGGAAAAGGGCAAGCGAGCA +
Preference number: 4 (lower is better)
Translates to: NMSFLPLVTFLHSITWFTSLSFL*EKGKRA
Trigger: TGCTCGCTTGCCCTTTTCTCAGAGAAAAGAGAGGGA...GGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAGAAATGACATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR TCA 90 bp GATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATATGCCTTATATATTTTGCTTTCCTaGAGCCCACGTACATTTTTC +
Preference number: 4 (lower is better)
Translates to: DSHRACSLTEHSVIIYALYILLS*SPRTFF
Trigger: GAAAAATGTACGTGGGCTTCAGGAAAGCAAAATATA...TAAGGCATATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp GATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATATGCCTTAAGCAAACTTTTATCCTaGACTGGGTTCTTCTTTACA +
Preference number: 4 (lower is better)
Translates to: DSHRACSLTEHSVIIYALSKLLS*TGFFFT
Trigger: TGTAAAGAAGAACCCAGTTCAGGATAAAAGTTTGCT...TAAGGCATATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp CCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCCATGTACAATGGTCAGAGTaGAGAAGGAGCTTTCTTGAC +
Preference number: 4 (lower is better)
Translates to: PLSHINKNRANQACPHLHVQWSE*RRSFLD
Trigger: GTCAAGAAAGCTCCTTCTTCACTCTGACCATTGTAC...ATGGAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAACCTTCTGCCAGCTCATaGGTTTCTGCTGTTCCCTCA +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKPSASS*VSAVPS
Trigger: TGAGGGAACAGCAGAAACTCATGAGCTGGCAGAAGG...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR TCA 90 bp CTTCCATCATCTGTTCGAGTTTGGATGTTGACAGAGAAAGGTTGCACTGAAACGCCATTATTTCACCACTaGTTCTCGAATGCAGAACAT +
Preference number: 4 (lower is better)
Translates to: LPSSVRVWMLTEKGCTETPLFHH*FSNAEH
Trigger: ATGTTCTGCATTCGAGAATCAGTGGTGAAATAATGG...CGTTTCAGTGCAACCTTTCTCTGTCAACATCCAAACTCGAACAGATGATGGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR TCA 90 bp GAACCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCCACATGAATATCTTCTaGACGATACTGGAGAACCCG +
Preference number: 4 (lower is better)
Translates to: EPLSHINKNRANQACPHLHMNIF*TILENP
Trigger: CGGGTTCTCCAGTATCGTTCAGAAGATATTCATGTG...GAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp CTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCAAGAATGTTAACTCCCACTGTATCCAATaGGAAACTACTGGACCAGGC +
Preference number: 4 (lower is better)
Translates to: LPLVTFLHSITWFTKNVNSHCIQ*ETTGPG
Trigger: GCCTGGTCCAGTAGTTTCTCATTGGATACAGTGGGA...GTTAACATTCTTGGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR TCA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTCCCACTGTATCCAATaGGAAACTACTGGACCAGGC +
Preference number: 4 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRSHCIQ*ETTGPG
Trigger: GCCTGGTCCAGTAGTTTCTCATTGGATACAGTGGGA...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR TCA 90 bp GATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATATGCCTTAAAAAGTTATGACAGTTaGATGTTCGGCAGTGTTTAC +
Preference number: 4 (lower is better)
Translates to: DSHRACSLTEHSVIIYALKSYDS*MFGSVY
Trigger: GTAAACACTGCCGAACATTCAACTGTCATAACTTTT...TAAGGCATATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp CCTGAATTGATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATAAAAGTTATGACAGTTaGATGTTCGGCAGTGTTTAC +
Preference number: 4 (lower is better)
Translates to: PELILTGPAPSQNTVSLYKSYDS*MFGSVY
Trigger: GTAAACACTGCCGAACATTCAACTGTCATAACTTTT...ATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATCAATTCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp GAACCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCCACTCTGTTTGTATGTaGGGATGTCCCATGGTGTAT +
Preference number: 4 (lower is better)
Translates to: EPLSHINKNRANQACPHLHSVCM*GCPMVY
Trigger: ATACACCATGGGACATCCTCACATACAAACAGAGTG...GAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp CCTGAATTGATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATTTTTCAACAGCAAGTTaGCAGAATGAACTGCAAACA +
Preference number: 4 (lower is better)
Translates to: PELILTGPAPSQNTVSLYFSTAS*QNELQT
Trigger: TGTTTGCAGTTCATTCTGTCAACTTGCTGTTGAAAA...ATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATCAATTCAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAATTCTTCAGGGCCTTaGACAGCACCCTGGAAGGGT +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFNSSGP*TAPWKG
Trigger: ACCCTTCCAGGGTGCTGTTCAAGGCCCTGAAGAATT...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR TCA 90 bp ACCATAATACACTTTAGAAAACTTGTCTTCAGCACTACTAAAAACCCACTACACAATTCTTCAGGGCCTTaGACAGCACCCTGGAAGGGT +
Preference number: 4 (lower is better)
Translates to: TIIHFRKLVFSTTKNPLHNSSGP*TAPWKG
Trigger: ACCCTTCCAGGGTGCTGTTCAAGGCCCTGAAGAATT...GTGTAGTGGGTTTTTAGTAGTGCTGAAGACAAGTTTTCTAAAGTGTATTATGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR TCA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTCCCAACAGAACCGGTaGTTCGAGATACAACTCCTG +
Preference number: 4 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRSQQNR*FEIQLL
Trigger: CAGGAGTTGTATCTCGAATCACCGGTTCTGTTGGGA...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR TCA 90 bp CTTGACATCCACGACAAAAACTACCAAGTCCTCTCATTAGTGTATAATCATTCTTCCCAACAGAACCGGTaGTTCGAGATACAACTCCTG +
Preference number: 4 (lower is better)
Translates to: LDIHDKNYQVLSLVYNHSSQQNR*FEIQLL
Trigger: CAGGAGTTGTATCTCGAATCACCGGTTCTGTTGGGA...AGAATGATTATACACTAATGAGAGGACTTGGTAGTTTTTGTCGTGGATGTCAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000645819.1
ENST00000649766.1
CDS-3UTR TCA 90 bp AACATGTCATTTCTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCGATTCTGCTGCCCTCTaGATGCCTTGGAAGGTACTA +
Preference number: 4 (lower is better)
Translates to: NMSFLPLVTFLHSITWFTDSAAL*MPWKVL
Trigger: TAGTACCTTCCAAGGCATTCAGAGGGCAGCAGAATC...GGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAGAAATGACATGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR TCA 90 bp CTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCAAGAATGTTAACGATTCTGCTGCCCTCTaGATGCCTTGGAAGGTACTA +
Preference number: 4 (lower is better)
Translates to: LPLVTFLHSITWFTKNVNDSAAL*MPWKVL
Trigger: TAGTACCTTCCAAGGCATTCAGAGGGCAGCAGAATC...GTTAACATTCTTGGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR TCA 90 bp CTTGACATCCACGACAAAAACTACCAAGTCCTCTCATTAGTGTATAATCATTCTGATTCTGCTGCCCTCTaGATGCCTTGGAAGGTACTA +
Preference number: 4 (lower is better)
Translates to: LDIHDKNYQVLSLVYNHSDSAAL*MPWKVL
Trigger: TAGTACCTTCCAAGGCATTCAGAGGGCAGCAGAATC...AGAATGATTATACACTAATGAGAGGACTTGGTAGTTTTTGTCGTGGATGTCAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000645819.1
ENST00000649766.1
CDS-3UTR GCA 90 bp CCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCCATCAGGGTCGCAACAACTaGTTCTCCATAAAGGTTCTT +
Preference number: 4 (lower is better)
Translates to: PLSHINKNRANQACPHLHQGRNN*FSIKVL
Trigger: AAGAACCTTTATGGAGAAGCAGTTGTTGCGACCCTG...ATGGAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR GCA 90 bp CCTGAATTGATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATCTGCTTCATTTAATATaGATGGAGTCCAGTGTTCAT +
Preference number: 4 (lower is better)
Translates to: PELILTGPAPSQNTVSLYLLHLI*MESSVH
Trigger: ATGAACACTGGACTCCATGCATATTAAATGAAGCAG...ATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATCAATTCAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR GCA 90 bp CCTGAATTGATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATATCTCTGGTAAGACATaGTGCAATTTACATTCCAGT +
Preference number: 4 (lower is better)
Translates to: PELILTGPAPSQNTVSLYISGKT*CNLHSS
Trigger: ACTGGAATGTAAATTGCAGCATGTCTTACCAGAGAT...ATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATCAATTCAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR GCA 90 bp CCTGAATTGATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATAAGAACAGAATCAATTaGATATTTCCACCATCGTCG +
Preference number: 4 (lower is better)
Translates to: PELILTGPAPSQNTVSLYKNRIN*IFPPSS
Trigger: CGACGATGGTGGAAATATGCAATTGATTCTGTTCTT...ATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATCAATTCAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR GCA 90 bp GATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATATGCCTTAATATGGGCAACATACTaGTTAGGTAAAGTTAGGTTG +
Preference number: 4 (lower is better)
Translates to: DSHRACSLTEHSVIIYALIWATY*LGKVRL
Trigger: CAACCTAACTTTACCTAAGCAGTATGTTGCCCATAT...TAAGGCATATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR GCA 90 bp CCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCCATGCTGAGATACTTGAGTaGCCAGGCCAATTATCTGAA +
Preference number: 4 (lower is better)
Translates to: PLSHINKNRANQACPHLHAEILE*PGQLSE
Trigger: TTCAGATAATTGGCCTGGGCACTCAAGTATCTCAGC...ATGGAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR GCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTCGCTTCTACCTTAAGTaGTTGTGCTCCTGGTCGCTG +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFRFYLK*LCSWSL
Trigger: CAGCGACCAGGAGCACAAGCACTTAAGGTAGAAGCG...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR GCA 90 bp CCTGAATTGATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATGTTGCTGATGTTATTTaGTCAAGATCCAATCCCTTA +
Preference number: 4 (lower is better)
Translates to: PELILTGPAPSQNTVSLYVADVI*SRSNPL
Trigger: TAAGGGATTGGATCTTGAGCAAATAACATCAGCAAC...ATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATCAATTCAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR GCA 90 bp GAACCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCTGTGGCAAGCTAGCCTaGAAAATAGTTCTTGACAGC +
Preference number: 4 (lower is better)
Translates to: EPLSHINKNRANQACPHLCGKLA*KIVLDS
Trigger: GCTGTCAAGAACTATTTTGCAGGCTAGCTTGCCACA...GAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR GCA 90 bp CCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCCATTTGACAGAGAAAGGTTaGACTGAAACGAGGCTGTCA +
Preference number: 4 (lower is better)
Translates to: PLSHINKNRANQACPHLHLTEKG*TETRLS
Trigger: TGACAGCCTCGTTTCAGTGCAACCTTTCTCTGTCAA...ATGGAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR GCA 90 bp TTTGAAGTGACGTTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTTTTATTCCCTTCAGTTaGATCAATTTGTACCAAGAC +
Preference number: 4 (lower is better)
Translates to: FEVTFLQGSDPFGWWRRSFIPFS*INLYQD
Trigger: GTCTTGGTACAAATTGATGCAACTGAAGGGAATAAA...ACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAACGTCACTTCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR GCA 90 bp CCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCCATTCTACTGATGGACACTaGAACATGCATCTGACTTCC +
Preference number: 4 (lower is better)
Translates to: PLSHINKNRANQACPHLHSTDGH*NMHLTS
Trigger: GGAAGTCAGATGCATGTTGCAGTGTCCATCAGTAGA...ATGGAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR GCA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGAGCAGTACTGCCTTCTaGCAGCTCATGAGTTTCTGC +
Preference number: 4 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRSSTAF*QLMSFC
Trigger: GCAGAAACTCATGAGCTGGCAGAAGGCAGTACTGCT...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR GCA 90 bp AACATGTCATTTCTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCGAACATCAGCAGTACTaGCTTCTGCCAGCTCATGAG +
Preference number: 4 (lower is better)
Translates to: NMSFLPLVTFLHSITWFTEHQQY*LLPAHE
Trigger: CTCATGAGCTGGCAGAAGGCAGTACTGCTGATGTTC...GGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAGAAATGACATGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR GCA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGGAACATCAGCAGTACTaGCTTCTGCCAGCTCATGAG +
Preference number: 4 (lower is better)
Translates to: PQVFICSQSHYYEKFRWREHQQY*LLPAHE
Trigger: CTCATGAGCTGGCAGAAGGCAGTACTGCTGATGTTC...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR GCA 90 bp GTAACAGTATCTGCTTCTGAGCTCAATAAAGGCTTTCATCTATTAAACGCAGAAGAACATCAGCAGTACTaGCTTCTGCCAGCTCATGAG +
Preference number: 4 (lower is better)
Translates to: VTVSASELNKGFHLLNAEEHQQY*LLPAHE
Trigger: CTCATGAGCTGGCAGAAGGCAGTACTGCTGATGTTC...TTCTGCGTTTAATAGATGAAAGCCTTTATTGAGCTCAGAAGCAGATACTGTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000645819.1
ENST00000649766.1
CDS-3UTR GCA 90 bp GATACCCCAAAGATTTTCCATTTCCTTAGACGTATCTTTGGATCCATCTTCTTTGAACATCAGCAGTACTaGCTTCTGCCAGCTCATGAG +
Preference number: 4 (lower is better)
Translates to: DTPKIFHFLRRIFGSIFFEHQQY*LLPAHE
Trigger: CTCATGAGCTGGCAGAAGGCAGTACTGCTGATGTTC...AAAGAAGATGGATCCAAAGATACGTCTAAGGAAATGGAAAATCTTTGGGGTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR GCA 90 bp GAACCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCCCACTGATTCTCGAATaGAGAACATCAGCAGTACTG +
Preference number: 4 (lower is better)
Translates to: EPLSHINKNRANQACPHLPLILE*RTSAVL
Trigger: CAGTACTGCTGATGTTCTGCATTCGAGAATCAGTGG...GAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR GCA 90 bp ACTGTACTCATTAAATCTTGTGATGACACTCACATCAATGAAAGGCTTGGGCTCCCACTGATTCTCGAATaGAGAACATCAGCAGTACTG +
Preference number: 4 (lower is better)
Translates to: TVLIKSCDDTHINERLGLPLILE*RTSAVL
Trigger: CAGTACTGCTGATGTTCTGCATTCGAGAATCAGTGG...GAGCCCAAGCCTTTCATTGATGTGAGTGTCATCACAAGATTTAATGAGTACAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR GCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTGGTACCAGTAGGATCTaGCCAGGCAAAAAGTCGAGC +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFGTSRI*PGKKSS
Trigger: GCTCGACTTTTTGCCTGGGCAGATCCTACTGGTACC...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR GCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAAGGTACCAGTAGGATCTaGCCAGGCAAAAAGTCGAGC +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKGTSRI*PGKKSS
Trigger: GCTCGACTTTTTGCCTGGGCAGATCCTACTGGTACC...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR GCA 90 bp GAACCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCCTGTTCCATTTCTTCTaGCTGCAGTGCTTTGGAAAC +
Preference number: 4 (lower is better)
Translates to: EPLSHINKNRANQACPHLLFHFF*LQCFGN
Trigger: GTTTCCAAAGCACTGCAGGCAGAAGAAATGGAACAG...GAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CCA 90 bp GAACCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCTCTGACTTTTCATGGTaGAAACCCGTCTGTGGAACT +
Preference number: 4 (lower is better)
Translates to: EPLSHINKNRANQACPHLSDFSW*KPVCGT
Trigger: AGTTCCACAGACGGGTTTCCACCATGAAAAGTCAGA...GAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CCA 90 bp CTTGACATCCACGACAAAAACTACCAAGTCCTCTCATTAGTGTATAATCATTCTTGTCTCTCTGGAGACTaGGCTGATGATTTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: LDIHDKNYQVLSLVYNHSCLSGD*ADDFCG
Trigger: GCCACAGAAATCATCAGCCCAGTCTCCAGAGAGACA...AGAATGATTATACACTAATGAGAGGACTTGGTAGTTTTTGTCGTGGATGTCAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR CCA 90 bp CCTGAATTGATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATGCTTTGATCATCAGATaGAATAATGGTTGTGAGGTA +
Preference number: 4 (lower is better)
Translates to: PELILTGPAPSQNTVSLYALIIR*NNGCEV
Trigger: TACCTCACAACCATTATTCCATCTGATGATCAAAGC...ATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATCAATTCAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CCA 90 bp GATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATATGCCTTACCCCTCAGTAGCATCTaGATACAAATCCAAATTAAA +
Preference number: 4 (lower is better)
Translates to: DSHRACSLTEHSVIIYALPLSSI*IQIQIK
Trigger: TTTAATTTGGATTTGTATCCAGATGCTACTGAGGGG...TAAGGCATATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CCA 90 bp GATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATATGCCTTATCAAACACATCCTTTTaGGAAATGTTGCTGGATACA +
Preference number: 4 (lower is better)
Translates to: DSHRACSLTEHSVIIYALSNTSF*EMLLDT
Trigger: TGTATCCAGCAACATTTCCCAAAAGGATGTGTTTGA...TAAGGCATATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CCA 90 bp CTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCAAGAATGTTAACCTGCAGCCTGGACTGTaGCTGTACTCAAAGCTTCTT +
Preference number: 4 (lower is better)
Translates to: LPLVTFLHSITWFTKNVNLQPGL*LYSKLL
Trigger: AAGAAGCTTTGAGTACAGCCACAGTCCAGGCTGCAG...GTTAACATTCTTGGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CCA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGCTGCAGCCTGGACTGTaGCTGTACTCAAAGCTTCTT +
Preference number: 4 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRLQPGL*LYSKLL
Trigger: AAGAAGCTTTGAGTACAGCCACAGTCCAGGCTGCAG...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CCA 90 bp CCTGAATTGATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATTCTTGTTCTTTGAGATaGTCAGGTACACTTGAAACA +
Preference number: 4 (lower is better)
Translates to: PELILTGPAPSQNTVSLYSCSLR*SGTLET
Trigger: TGTTTCAAGTGTACCTGACCATCTCAAAGAACAAGA...ATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATCAATTCAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CCA 90 bp AACATGTCATTTCTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCCACTCTCTCAATCAGTaGCTCCCAGACAGCATGGAT +
Preference number: 4 (lower is better)
Translates to: NMSFLPLVTFLHSITWFTHSLNQ*LPDSMD
Trigger: ATCCATGCTGTCTGGGAGCCACTGATTGAGAGAGTG...GGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAGAAATGACATGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CCA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGCACTCTCTCAATCAGTaGCTCCCAGACAGCATGGAT +
Preference number: 4 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRHSLNQ*LPDSMD
Trigger: ATCCATGCTGTCTGGGAGCCACTGATTGAGAGAGTG...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CCA 90 bp TCTCTGAGAAAAGGGCAAGCGAGCACTTTCAGATCTCTCACAGAAGCTTCCATCATGAATTGCCATTTGTaGCTCAGGAATAAAATCATC +
Preference number: 4 (lower is better)
Translates to: SLRKGQASTFRSLTEASIMNCHL*LRNKII
Trigger: GATGATTTTATTCCTGAGCCACAAATGGCAATTCAT...GATGGAAGCTTCTGTGAGAGATCTGAAAGTGCTCGCTTGCCCTTTTCTCAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR CCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAAATCGCCGTCCAGGTCTaGCCACAGGGATATTTGCAA +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKIAVQV*PQGYLQ
Trigger: TTGCAAATATCCCTGTGGCCAGACCTGGACGGCGAT...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CCA 90 bp CTTCCATCATCTGTTCGAGTTTGGATGTTGACAGAGAAAGGTTGCACTGAAACGCAGAATGACTGGCATTaGGATTCCGTACATTATACA +
Preference number: 4 (lower is better)
Translates to: LPSSVRVWMLTEKGCTETQNDWH*DSVHYT
Trigger: TGTATAATGTACGGAATCCCAATGCCAGTCATTCTG...CGTTTCAGTGCAACCTTTCTCTGTCAACATCCAAACTCGAACAGATGATGGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR CCA 90 bp GAACCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCCAGAGTCAGAATGACTaGCATTGGGATTCCGTACAT +
Preference number: 4 (lower is better)
Translates to: EPLSHINKNRANQACPHLQSQND*HWDSVH
Trigger: ATGTACGGAATCCCAATGCCAGTCATTCTGACTCTG...GAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAAACTCCTCTTCAGGTCTaGCTATCCCAATGCGCTCCA +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKTPLQV*LSQCAP
Trigger: TGGAGCGCATTGGGATAGCCAGACCTGAAGAGGAGT...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAACCAATTCTCCTGACGTaGACTGACAGGTCGACTGTC +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKPILLT*TDRSTV
Trigger: GACAGTCGACCTGTCAGTCCACGTCAGGAGAATTGG...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CCA 90 bp TTTGAAGTGACGTTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTTACTGGACCAGGCACTaGTTGAAATTTTTAATTGTA +
Preference number: 4 (lower is better)
Translates to: FEVTFLQGSDPFGWWRRSYWTRH*LKFLIV
Trigger: TACAATTAAAAATTTCAACCAGTGCCTGGTCCAGTA...ACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAACGTCACTTCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CCA 90 bp CCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCCATCCAATGAGAAACTACTaGACCAGGCACTGGTTGAAA +
Preference number: 4 (lower is better)
Translates to: PLSHINKNRANQACPHLHPMRNY*TRHWLK
Trigger: TTTCAACCAGTGCCTGGTCCAGTAGTTTCTCATTGG...ATGGAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CCA 90 bp ACTGTACTCATTAAATCTTGTGATGACACTCACATCAATGAAAGGCTTGGGCTCCCAATGAGAAACTACTaGACCAGGCACTGGTTGAAA +
Preference number: 4 (lower is better)
Translates to: TVLIKSCDDTHINERLGLPMRNY*TRHWLK
Trigger: TTTCAACCAGTGCCTGGTCCAGTAGTTTCTCATTGG...GAGCCCAAGCCTTTCATTGATGTGAGTGTCATCACAAGATTTAATGAGTACAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR CCA 90 bp GATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATATGCCTTATATAAAAGAATGGTTTaGAAGATCCTTCACAGCCCA +
Preference number: 4 (lower is better)
Translates to: DSHRACSLTEHSVIIYALYKRMV*KILHSP
Trigger: TGGGCTGTGAAGGATCTTCCAAACCATTCTTTTATA...TAAGGCATATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CCA 90 bp TTTGAAGTGACGTTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTTCGGTTATAAAAGAATaGTTTGGAAGATCCTTCACA +
Preference number: 4 (lower is better)
Translates to: FEVTFLQGSDPFGWWRRSSVIKE*FGRSFT
Trigger: TGTGAAGGATCTTCCAAACCATTCTTTTATAACCGA...ACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAACGTCACTTCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CCA 90 bp TTTGAAGTGACGTTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGCATCAATATCTTGTTaGATTAACTTTGTCCGTCTT +
Preference number: 4 (lower is better)
Translates to: FEVTFLQGSDPFGWWRRSASISC*INFVRL
Trigger: AAGACGGACAAAGTTAATCCAACAAGATATTGATGC...ACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAACGTCACTTCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CCA 90 bp GAACCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCCTTGGAAGGTACTACTaGCCATATCTACGATTCCAC +
Preference number: 4 (lower is better)
Translates to: EPLSHINKNRANQACPHLLGRYY*PYLRFH
Trigger: GTGGAATCGTAGATATGGCCAGTAGTACCTTCCAAG...GAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CCA 90 bp TTTGAAGTGACGTTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTTACAAAATCTTCAAATaGACATTGCCAGTCTACACA +
Preference number: 4 (lower is better)
Translates to: FEVTFLQGSDPFGWWRRSYKIFK*TLPVYT
Trigger: TGTGTAGACTGGCAATGTCCATTTGAAGATTTTGTA...ACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAACGTCACTTCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CCA 90 bp AACATGTCATTTCTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCATGCTCTCTCTGCTGTaGCGGTGTCCTTCAGGTAAA +
Preference number: 4 (lower is better)
Translates to: NMSFLPLVTFLHSITWFTMLSLL*RCPSGK
Trigger: TTTACCTGAAGGACACCGCCACAGCAGAGAGAGCAT...GGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAGAAATGACATGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CCA 90 bp ACTGTACTCATTAAATCTTGTGATGACACTCACATCAATGAAAGGCTTGGGCTCACTGTGCATCCTCAATaGCATTACATGCTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: TVLIKSCDDTHINERLGLTVHPQ*HYMLSL
Trigger: CAGAGAGAGCATGTAATGCCATTGAGGATGCACAGT...GAGCCCAAGCCTTTCATTGATGTGAGTGTCATCACAAGATTTAATGAGTACAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR CAA 72 bp GATGCAATCTCGCCAACTTCTAGTTCTAATGATGACTaGTTTGCAATGGTACAAAAGGGAGTCAGGGTAACT +
Preference number: 4 (lower is better)
Translates to: DAISPTSSSNDD*FAMVQKGVRVT
Trigger: AGTTACCCTGACTCCCTTTTGTACCATTGCAAACAAGTCATCATTAGAACTAGAAGTTGGCGAGATTGCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR CAA 72 bp GACACTAGGAGGAAATACAAAATCTTCAAATGGACATaGCCAGTCTACACACATAAGGCCCAGGATTTCAAC +
Preference number: 4 (lower is better)
Translates to: DTRRKYKIFKWT*PVYTHKAQDFN
Trigger: GTTGAAATCCTGGGCCTTATGTGTGTAGACTGGCAATGTCCATTTGAAGATTTTGTATTTCCTCCTAGTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR TCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAACAGTGTGACACCAAATaGAAGAGGCCGCTTTGGATC +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKQCDTK*KRPLWI
Trigger: GATCCAAAGCGGCCTCTTTCATTTGGTGTCACACTG...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR TCA 90 bp GAACCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCCAAAATCTGTTCCCTTaGTCTCTGGTAAGACATGCT +
Preference number: 4 (lower is better)
Translates to: EPLSHINKNRANQACPHLQNLFP*SLVRHA
Trigger: AGCATGTCTTACCAGAGATCAAGGGAACAGATTTTG...GAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGGTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp CCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCCATGAGTTTTGCAGAGGCTaGTATTGGCTGGAAAATGTA +
Preference number: 4 (lower is better)
Translates to: PLSHINKNRANQACPHLHEFCRG*YWLENV
Trigger: TACATTTTCCAGCCAATATCAGCCTCTGCAAAACTC...ATGGAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp GAACCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCCTTGACAGCTTCAACTaGGTGAGTTCGATGTTCATT +
Preference number: 4 (lower is better)
Translates to: EPLSHINKNRANQACPHLLDSFN*VSSMFI
Trigger: AATGAACATCGAACTCACTCAGTTGAAGCTGTCAAG...GAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGGTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp GAACCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCCTGCAAAATAGTTCTTaGCAGCTTCAACTGAGTGAG +
Preference number: 4 (lower is better)
Translates to: EPLSHINKNRANQACPHLLQNSS*QLQLSE
Trigger: CTCACTCAGTTGAAGCTGTCAAGAACTATTTTGCAG...GAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGGTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp CTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCAAGAATGTTAACCATCTTTCTCTATCTTaGCCTTCCCTGTGGCAGTCT +
Preference number: 4 (lower is better)
Translates to: LPLVTFLHSITWFTKNVNHLSLS*PSLWQS
Trigger: AGACTGCCACAGGGAAGGTCAAGATAGAGAAAGATG...GTTAACATTCTTGGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR TCA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGCATCTTTCTCTATCTTaGCCTTCCCTGTGGCAGTCT +
Preference number: 4 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRHLSLS*PSLWQS
Trigger: AGACTGCCACAGGGAAGGTCAAGATAGAGAAAGATG...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR TCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAAAGAGAAAGGTTGCACTaGAACGAGGCTGTCAGAGCA +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKRERLH*NEAVRA
Trigger: TGCTCTGACAGCCTCGTTTCAGTGCAACCTTTCTCT...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR TCA 90 bp ACCATAATACACTTTAGAAAACTTGTCTTCAGCACTACTAAAAACCCACTACACTCCCTCTCTTTTCTCTaGGAAAAGGGCAAGCGAGCA +
Preference number: 4 (lower is better)
Translates to: TIIHFRKLVFSTTKNPLHSLSFL*EKGKRA
Trigger: TGCTCGCTTGCCCTTTTCTCAGAGAAAAGAGAGGGA...GTGTAGTGGGTTTTTAGTAGTGCTGAAGACAAGTTTTCTAAAGTGTATTATGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR TCA 90 bp CTTGACATCCACGACAAAAACTACCAAGTCCTCTCATTAGTGTATAATCATTCTGAAGCTGACTTCTACTaGTGGACACTGCAACATGCA +
Preference number: 4 (lower is better)
Translates to: LDIHDKNYQVLSLVYNHSEADFY*WTLQHA
Trigger: TGCATGTTGCAGTGTCCATCAGTAGAAGTCAGCTTC...AGAATGATTATACACTAATGAGAGGACTTGGTAGTTTTTGTCGTGGATGTCAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000645819.1
ENST00000649766.1
CDS-3UTR TCA 90 bp GATACCCCAAAGATTTTCCATTTCCTTAGACGTATCTTTGGATCCATCTTCTTTGAAGCTGACTTCTACTaGTGGACACTGCAACATGCA +
Preference number: 4 (lower is better)
Translates to: DTPKIFHFLRRIFGSIFFEADFY*WTLQHA
Trigger: TGCATGTTGCAGTGTCCATCAGTAGAAGTCAGCTTC...AAAGAAGATGGATCCAAAGATACGTCTAAGGAAATGGAAAATCTTTGGGGTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR TCA 90 bp ACCATAATACACTTTAGAAAACTTGTCTTCAGCACTACTAAAAACCCACTACACTCCCACTGTATCCAATaGGAAACTACTGGACCAGGC +
Preference number: 4 (lower is better)
Translates to: TIIHFRKLVFSTTKNPLHSHCIQ*ETTGPG
Trigger: GCCTGGTCCAGTAGTTTCTCATTGGATACAGTGGGA...GTGTAGTGGGTTTTTAGTAGTGCTGAAGACAAGTTTTCTAAAGTGTATTATGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR TCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAATCCCACTGTATCCAATaGGAAACTACTGGACCAGGC +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKSHCIQ*ETTGPG
Trigger: GCCTGGTCCAGTAGTTTCTCATTGGATACAGTGGGA...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR TCA 90 bp CCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCCATCACACAAAGTTTGCCTaGCAAACTTTCTGGCCAAAA +
Preference number: 4 (lower is better)
Translates to: PLSHINKNRANQACPHLHHTKFA*QTFWPK
Trigger: TTTTGGCCAGAAAGTTTGTCAGGCAAACTTTGTGTG...ATGGAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAAGCGCCCATCCAGAAATaGTACCCAGTGTATCTGGAT +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKAPIQK*YPVYLD
Trigger: ATCCAGATACACTGGGTATCATTTCTGGATGGGCGC...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR TCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTGCGCCCATCCAGAAATaGTACCCAGTGTATCTGGAT +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFAPIQK*YPVYLD
Trigger: ATCCAGATACACTGGGTATCATTTCTGGATGGGCGC...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR TCA 90 bp GTAACAGTATCTGCTTCTGAGCTCAATAAAGGCTTTCATCTATTAAACGCAGAAAGGCAACATCATCGGTaGAAAGCAAAACTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: VTVSASELNKGFHLLNAERQHHR*KAKLSG
Trigger: GCCAGAGAGTTTTGCTTTTCACCGATGATGTTGCCT...TTCTGCGTTTAATAGATGAAAGCCTTTATTGAGCTCAGAAGCAGATACTGTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000645819.1
ENST00000649766.1
CDS-3UTR TCA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGAGGCAACATCATCGGTaGAAAGCAAAACTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRRQHHR*KAKLSG
Trigger: GCCAGAGAGTTTTGCTTTTCACCGATGATGTTGCCT...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR TCA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGGGAGGGGCAACAGGATaGAATACAACAGGGAACATT +
Preference number: 4 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRGGATG*NTTGNI
Trigger: AATGTTCCCTGTTGTATTTCATCCTGTTGCCCCTCC...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR TCA 90 bp CTTGACATCCACGACAAAAACTACCAAGTCCTCTCATTAGTGTATAATCATTCTGGAGGGGCAACAGGATaGAATACAACAGGGAACATT +
Preference number: 4 (lower is better)
Translates to: LDIHDKNYQVLSLVYNHSGGATG*NTTGNI
Trigger: AATGTTCCCTGTTGTATTTCATCCTGTTGCCCCTCC...AGAATGATTATACACTAATGAGAGGACTTGGTAGTTTTTGTCGTGGATGTCAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000645819.1
ENST00000649766.1
CDS-3UTR TCA 90 bp AACATGTCATTTCTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCGGAGGGGCAACAGGATaGAATACAACAGGGAACATT +
Preference number: 4 (lower is better)
Translates to: NMSFLPLVTFLHSITWFTGGATG*NTTGNI
Trigger: AATGTTCCCTGTTGTATTTCATCCTGTTGCCCCTCC...GGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAGAAATGACATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR TCA 90 bp CTTCCATCATCTGTTCGAGTTTGGATGTTGACAGAGAAAGGTTGCACTGAAACGTTTTCAACAGCAAGTTaGCAGAATGAACTGCAAACA +
Preference number: 4 (lower is better)
Translates to: LPSSVRVWMLTEKGCTETFSTAS*QNELQT
Trigger: TGTTTGCAGTTCATTCTGTCAACTTGCTGTTGAAAA...CGTTTCAGTGCAACCTTTCTCTGTCAACATCCAAACTCGAACAGATGATGGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR TCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTGATTCTGCTGCCCTCTaGATGCCTTGGAAGGTACTA +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFDSAAL*MPWKVL
Trigger: TAGTACCTTCCAAGGCATTCAGAGGGCAGCAGAATC...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR TCA 90 bp CCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCCATTGTCATAAGGACGAATaGTGCCATCTTCATGGATCA +
Preference number: 4 (lower is better)
Translates to: PLSHINKNRANQACPHLHCHKDE*CHLHGS
Trigger: TGATCCATGAAGATGGCATCATTCGTCCTTATGACA...ATGGAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp GAACCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCATTCTGAGTTTGAAGTaGCGTTTCTTCAAGGGTCTG +
Preference number: 4 (lower is better)
Translates to: EPLSHINKNRANQACPHLILSLK*RFFKGL
Trigger: CAGACCCTTGAAGAAACGTCACTTCAAACTCAGAAT...GAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGGTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp CTTGACATCCACGACAAAAACTACCAAGTCCTCTCATTAGTGTATAATCATTCTTCTCCAAGCCATATATaGACTCCCCTGAATGTGTGC +
Preference number: 4 (lower is better)
Translates to: LDIHDKNYQVLSLVYNHSSPSHI*TPLNVC
Trigger: GCACACATTCAGGGGAGTTCATATATGGCTTGGAGA...AGAATGATTATACACTAATGAGAGGACTTGGTAGTTTTTGTCGTGGATGTCAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR GCA 90 bp CTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCAAGAATGTTAACTACCTTAAGTGCTTGTaGTCCTGGTCGCTGAGATAC +
Preference number: 4 (lower is better)
Translates to: LPLVTFLHSITWFTKNVNYLKCL*SWSLRY
Trigger: GTATCTCAGCGACCAGGAGCACAAGCACTTAAGGTA...GTTAACATTCTTGGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR GCA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTACCTTAAGTGCTTGTaGTCCTGGTCGCTGAGATAC +
Preference number: 4 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRYLKCL*SWSLRY
Trigger: GTATCTCAGCGACCAGGAGCACAAGCACTTAAGGTA...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR GCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTTATCAGGATGGTAGATaGCTGGCTGGATCACTGTCC +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFYQDGR*LAGSLS
Trigger: GGACAGTGATCCAGCCAGGCATCTACCATCCTGATA...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR GCA 90 bp ACCATAATACACTTTAGAAAACTTGTCTTCAGCACTACTAAAAACCCACTACACTATCAGGATGGTAGATaGCTGGCTGGATCACTGTCC +
Preference number: 4 (lower is better)
Translates to: TIIHFRKLVFSTTKNPLHYQDGR*LAGSLS
Trigger: GGACAGTGATCCAGCCAGGCATCTACCATCCTGATA...GTGTAGTGGGTTTTTAGTAGTGCTGAAGACAAGTTTTCTAAAGTGTATTATGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR GCA 90 bp GAACCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCGCTTCCATTCCAAGTTaGAGGACATTTAGCTCATGT +
Preference number: 4 (lower is better)
Translates to: EPLSHINKNRANQACPHLASIPS*RTFSSC
Trigger: ACATGAGCTAAATGTCCTGCAACTTGGAATGGAAGC...GAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGGTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR GCA 90 bp CTTGACATCCACGACAAAAACTACCAAGTCCTCTCATTAGTGTATAATCATTCTTCCATCCCTGGAATTTaGACATACCATGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: LDIHDKNYQVLSLVYNHSSIPGI*TYHAAA
Trigger: AGCAGCAGCATGGTATGTGCAAATTCCAGGGATGGA...AGAATGATTATACACTAATGAGAGGACTTGGTAGTTTTTGTCGTGGATGTCAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR GCA 90 bp AACATGTCATTTCTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCACTCTTACAGTCTCCTaGACAGACTGTGTAGGGCTT +
Preference number: 4 (lower is better)
Translates to: NMSFLPLVTFLHSITWFTTLTVS*TDCVGL
Trigger: AAGCCCTACACAGTCTGTGCAGGAGACTGTAAGAGT...GGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAGAAATGACATGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR GCA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGACTCTTACAGTCTCCTaGACAGACTGTGTAGGGCTT +
Preference number: 4 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRTLTVS*TDCVGL
Trigger: AAGCCCTACACAGTCTGTGCAGGAGACTGTAAGAGT...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR GCA 90 bp AACATGTCATTTCTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCGACTTGAAGGTACCATaGTGGCATACTCCAGTTCCA +
Preference number: 4 (lower is better)
Translates to: NMSFLPLVTFLHSITWFTDLKVP*WHTPVP
Trigger: TGGAACTGGAGTATGCCAGCATGGTACCTTCAAGTC...GGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAGAAATGACATGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR GCA 90 bp CTTGACATCCACGACAAAAACTACCAAGTCCTCTCATTAGTGTATAATCATTCTGACTTGAAGGTACCATaGTGGCATACTCCAGTTCCA +
Preference number: 4 (lower is better)
Translates to: LDIHDKNYQVLSLVYNHSDLKVP*WHTPVP
Trigger: TGGAACTGGAGTATGCCAGCATGGTACCTTCAAGTC...AGAATGATTATACACTAATGAGAGGACTTGGTAGTTTTTGTCGTGGATGTCAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR GCA 90 bp GATACCCCAAAGATTTTCCATTTCCTTAGACGTATCTTTGGATCCATCTTCTTTGACTTGAAGGTACCATaGTGGCATACTCCAGTTCCA +
Preference number: 4 (lower is better)
Translates to: DTPKIFHFLRRIFGSIFFDLKVP*WHTPVP
Trigger: TGGAACTGGAGTATGCCAGCATGGTACCTTCAAGTC...AAAGAAGATGGATCCAAAGATACGTCTAAGGAAATGGAAAATCTTTGGGGTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR GCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAAAGCAGTACTGCCTTCTaGCAGCTCATGAGTTTCTGC +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKSSTAF*QLMSFC
Trigger: GCAGAAACTCATGAGCTGGCAGAAGGCAGTACTGCT...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR GCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAGCAGTACTGCCTTCTaGCAGCTCATGAGTTTCTGC +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFSSTAF*QLMSFC
Trigger: GCAGAAACTCATGAGCTGGCAGAAGGCAGTACTGCT...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR GCA 90 bp AATACAAAATCTTCAAATGGACATTGCCAGTCTACACACATAAGGCCCAGGATTGTCCATTCCAGTTTTTaGCCTGGTATTTCACCAGGA +
Preference number: 4 (lower is better)
Translates to: NTKSSNGHCQSTHIRPRIVHSSF*PGISPG
Trigger: TCCTGGTGAAATACCAGGGCAAAAACTGGAATGGAC...AATCCTGGGCCTTATGTGTGTAGACTGGCAATGTCCATTTGAAGATTTTGTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR GCA 90 bp TGCCTGACAAACTTTCTGGCCAAAATGGAAGGCACTCTGAAGAAGCAATATAGTGTGTATCTGGATGTTTaGATCATATGGAAACTGTCC +
Preference number: 4 (lower is better)
Translates to: CLTNFLAKMEGTLKKQYSVYLDV*IIWKLS
Trigger: GGACAGTTTCCATATGATGCAAACATCCAGATACAC...ACTATATTGCTTCTTCAGAGTGCCTTCCATTTTGGCCAGAAAGTTTGTCAGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR GCA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTTCTTCTGCCTGCAGTaGTTTGGAAACCAAGGCAAC +
Preference number: 4 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRFFCLQ*FGNQGN
Trigger: GTTGCCTTGGTTTCCAAAGCACTGCAGGCAGAAGAA...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR GCA 90 bp AACATGTCATTTCTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCTTCTTCTGCCTGCAGTaGTTTGGAAACCAAGGCAAC +
Preference number: 4 (lower is better)
Translates to: NMSFLPLVTFLHSITWFTFFCLQ*FGNQGN
Trigger: GTTGCCTTGGTTTCCAAAGCACTGCAGGCAGAAGAA...GGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAGAAATGACATGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR GCA 90 bp CTTGACATCCACGACAAAAACTACCAAGTCCTCTCATTAGTGTATAATCATTCTTTCTTCTGCCTGCAGTaGTTTGGAAACCAAGGCAAC +
Preference number: 4 (lower is better)
Translates to: LDIHDKNYQVLSLVYNHSFFCLQ*FGNQGN
Trigger: GTTGCCTTGGTTTCCAAAGCACTGCAGGCAGAAGAA...AGAATGATTATACACTAATGAGAGGACTTGGTAGTTTTTGTCGTGGATGTCAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000645819.1
ENST00000649766.1
CDS-3UTR GCA 90 bp GAACCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCCTTGTCCATTGTAATTaGTGCCAAACCTTTCCCAAC +
Preference number: 4 (lower is better)
Translates to: EPLSHINKNRANQACPHLLVHCN*CQTFPN
Trigger: GTTGGGAAAGGTTTGGCAGCAATTACAATGGACAAG...GAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGGTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR GCA 90 bp TCGTTTAATAGGGCTACGAATAGGGAGGCGCATTTCCATTGGATCTTTATCAAACTTGTCCATTGTAATTaGTGCCAAACCTTTCCCAAC +
Preference number: 4 (lower is better)
Translates to: SFNRATNREAHFHWIFIKLVHCN*CQTFPN
Trigger: GTTGGGAAAGGTTTGGCAGCAATTACAATGGACAAG...TTTGATAAAGATCCAATGGAAATGCGCCTCCCTATTCGTAGCCCTATTAAACGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR CCA 90 bp GATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATATGCCTTATTAAGTACTGAGGTTTaGTCAGTTCAATGGCAATAT +
Preference number: 4 (lower is better)
Translates to: DSHRACSLTEHSVIIYALLSTEV*SVQWQY
Trigger: ATATTGCCATTGAACTGACCAAACCTCAGTACTTAA...TAAGGCATATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CCA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGAAGTGCTTGTGCTCCTaGTCGCTGAGATACTTGAGT +
Preference number: 4 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRKCLCS*SLRYLS
Trigger: ACTCAAGTATCTCAGCGACCAGGAGCACAAGCACTT...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CCA 90 bp CTTGACATCCACGACAAAAACTACCAAGTCCTCTCATTAGTGTATAATCATTCTAAGTGCTTGTGCTCCTaGTCGCTGAGATACTTGAGT +
Preference number: 4 (lower is better)
Translates to: LDIHDKNYQVLSLVYNHSKCLCS*SLRYLS
Trigger: ACTCAAGTATCTCAGCGACCAGGAGCACAAGCACTT...AGAATGATTATACACTAATGAGAGGACTTGGTAGTTTTTGTCGTGGATGTCAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR CCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTTGTCTCTCTGGAGACTaGGCTGATGATTTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFCLSGD*ADDFCG
Trigger: GCCACAGAAATCATCAGCCCAGTCTCCAGAGAGACA...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CCA 90 bp AACATGTCATTTCTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCAGGATGGTAGATGCCTaGCTGGATCACTGTCCTATA +
Preference number: 4 (lower is better)
Translates to: NMSFLPLVTFLHSITWFTRMVDA*LDHCPI
Trigger: TATAGGACAGTGATCCAGCCAGGCATCTACCATCCT...GGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAGAAATGACATGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CCA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGACAACAGGCACCTTGTaGTACCAAGATGCAGCTAGA +
Preference number: 4 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRTTGTL*YQDAAR
Trigger: TCTAGCTGCATCTTGGTACCACAAGGTGCCTGTTGT...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CCA 90 bp GTAACAGTATCTGCTTCTGAGCTCAATAAAGGCTTTCATCTATTAAACGCAGAAACAACAGGCACCTTGTaGTACCAAGATGCAGCTAGA +
Preference number: 4 (lower is better)
Translates to: VTVSASELNKGFHLLNAETTGTL*YQDAAR
Trigger: TCTAGCTGCATCTTGGTACCACAAGGTGCCTGTTGT...TTCTGCGTTTAATAGATGAAAGCCTTTATTGAGCTCAGAAGCAGATACTGTTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR CCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAACTGCAGCCTGGACTGTaGCTGTACTCAAAGCTTCTT +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKLQPGL*LYSKLL
Trigger: AAGAAGCTTTGAGTACAGCCACAGTCCAGGCTGCAG...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CCA 90 bp CCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCCATTGGAGACTGACAATCTaGTTCATAGAGAGCTTTGAG +
Preference number: 4 (lower is better)
Translates to: PLSHINKNRANQACPHLHWRLTI*FIESFE
Trigger: CTCAAAGCTCTCTATGAACCAGATTGTCAGTCTCCA...ATGGAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CCA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGCAGCCTTTGTCAGGCTaGCAACAAATACCACTTCTG +
Preference number: 4 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRQPLSG*QQIPLL
Trigger: CAGAAGTGGTATTTGTTGCCAGCCTGACAAAGGCTG...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CCA 90 bp CTTGACATCCACGACAAAAACTACCAAGTCCTCTCATTAGTGTATAATCATTCTCAGCCTTTGTCAGGCTaGCAACAAATACCACTTCTG +
Preference number: 4 (lower is better)
Translates to: LDIHDKNYQVLSLVYNHSQPLSG*QQIPLL
Trigger: CAGAAGTGGTATTTGTTGCCAGCCTGACAAAGGCTG...AGAATGATTATACACTAATGAGAGGACTTGGTAGTTTTTGTCGTGGATGTCAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR CCA 90 bp CCTGAATTGATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATATCTTCTTTTGTTTTTaGAGACAATGCAGCCATGAT +
Preference number: 4 (lower is better)
Translates to: PELILTGPAPSQNTVSLYIFFCF*RQCSHD
Trigger: ATCATGGCTGCATTGTCTCCAAAAACAAAAGAAGAT...ATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATCAATTCAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CCA 90 bp CCTGAATTGATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATAATAAAATCATCTCCTaGCAGCAAACTTTTATCCTG +
Preference number: 4 (lower is better)
Translates to: PELILTGPAPSQNTVSLYNKIIS*QQTFIL
Trigger: CAGGATAAAAGTTTGCTGCCAGGAGATGATTTTATT...ATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATCAATTCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CCA 90 bp CCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCCATGAATCTAAAGGAACATaGAACTCCTCTTCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: PLSHINKNRANQACPHLHESKGT*NSSSGL
Trigger: CAGACCTGAAGAGGAGTTCCATGTTCCTTTAGATTC...ATGGAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CCA 90 bp AACATGTCATTTCTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCTCTTCTGAACGATACTaGAGAACCCGGGTAGTCTTG +
Preference number: 4 (lower is better)
Translates to: NMSFLPLVTFLHSITWFTSSERY*RTRVVL
Trigger: CAAGACTACCCGGGTTCTCCAGTATCGTTCAGAAGA...GGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAGAAATGACATGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CCA 90 bp CTTGACATCCACGACAAAAACTACCAAGTCCTCTCATTAGTGTATAATCATTCTTCTTCTGAACGATACTaGAGAACCCGGGTAGTCTTG +
Preference number: 4 (lower is better)
Translates to: LDIHDKNYQVLSLVYNHSSSERY*RTRVVL
Trigger: CAAGACTACCCGGGTTCTCCAGTATCGTTCAGAAGA...AGAATGATTATACACTAATGAGAGGACTTGGTAGTTTTTGTCGTGGATGTCAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CCA 90 bp CCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCCATATGACTTGTTTGCAATaGTACAAAAGGGAGTCAGGG +
Preference number: 4 (lower is better)
Translates to: PLSHINKNRANQACPHLHMTCLQ*YKRESG
Trigger: CCCTGACTCCCTTTTGTACCATTGCAAACAAGTCAT...ATGGAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CCA 90 bp CCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCCATATGTCCCATGGTGTATaGTTCATTATCAAGGCAGGT +
Preference number: 4 (lower is better)
Translates to: PLSHINKNRANQACPHLHMSHGV*FIIKAG
Trigger: ACCTGCCTTGATAATGAACCATACACCATGGGACAT...ATGGAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CCA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGAAGTCGAGCCTGTCTTaGCAGCAAGACCATTTCTTC +
Preference number: 4 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRKSSLS*QQDHFF
Trigger: GAAGAAATGGTCTTGCTGCCAAGACAGGCTCGACTT...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CCA 90 bp AACATGTCATTTCTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCAAGTCGAGCCTGTCTTaGCAGCAAGACCATTTCTTC +
Preference number: 4 (lower is better)
Translates to: NMSFLPLVTFLHSITWFTKSSLS*QQDHFF
Trigger: GAAGAAATGGTCTTGCTGCCAAGACAGGCTCGACTT...GGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAGAAATGACATGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CCA 90 bp CTTGACATCCACGACAAAAACTACCAAGTCCTCTCATTAGTGTATAATCATTCTAAGTCGAGCCTGTCTTaGCAGCAAGACCATTTCTTC +
Preference number: 4 (lower is better)
Translates to: LDIHDKNYQVLSLVYNHSKSSLS*QQDHFF
Trigger: GAAGAAATGGTCTTGCTGCCAAGACAGGCTCGACTT...AGAATGATTATACACTAATGAGAGGACTTGGTAGTTTTTGTCGTGGATGTCAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CCA 90 bp GAACCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCAAAAGCAAAACTCTCTaGCGCCCATCCAGAAATGAT +
Preference number: 4 (lower is better)
Translates to: EPLSHINKNRANQACPHLKSKTL*RPSRND
Trigger: ATCATTTCTGGATGGGCGCCAGAGAGTTTTGCTTTT...GAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGGTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CCA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGCTGCCTGCAGTGCTTTaGAAACCAAGGCAACATCAT +
Preference number: 4 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRLPAVL*KPRQHH
Trigger: ATGATGTTGCCTTGGTTTCCAAAGCACTGCAGGCAG...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CCA 90 bp CTTGACATCCACGACAAAAACTACCAAGTCCTCTCATTAGTGTATAATCATTCTCTGCCTGCAGTGCTTTaGAAACCAAGGCAACATCAT +
Preference number: 4 (lower is better)
Translates to: LDIHDKNYQVLSLVYNHSLPAVL*KPRQHH
Trigger: ATGATGTTGCCTTGGTTTCCAAAGCACTGCAGGCAG...AGAATGATTATACACTAATGAGAGGACTTGGTAGTTTTTGTCGTGGATGTCAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CCA 90 bp GTAACAGTATCTGCTTCTGAGCTCAATAAAGGCTTTCATCTATTAAACGCAGAACTGCCTGCAGTGCTTTaGAAACCAAGGCAACATCAT +
Preference number: 4 (lower is better)
Translates to: VTVSASELNKGFHLLNAELPAVL*KPRQHH
Trigger: ATGATGTTGCCTTGGTTTCCAAAGCACTGCAGGCAG...TTCTGCGTTTAATAGATGAAAGCCTTTATTGAGCTCAGAAGCAGATACTGTTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CCA 90 bp GAACCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCGAAAGCCCAAGACTGTaGAGAGACAAGGTTATTTCA +
Preference number: 4 (lower is better)
Translates to: EPLSHINKNRANQACPHLESPRL*RDKVIS
Trigger: TGAAATAACCTTGTCTCTCCACAGTCTTGGGCTTTC...GAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGGTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CCA 90 bp TCGTTTAATAGGGCTACGAATAGGGAGGCGCATTTCCATTGGATCTTTATCAAAGAAAGCCCAAGACTGTaGAGAGACAAGGTTATTTCA +
Preference number: 4 (lower is better)
Translates to: SFNRATNREAHFHWIFIKESPRL*RDKVIS
Trigger: TGAAATAACCTTGTCTCTCCACAGTCTTGGGCTTTC...TTTGATAAAGATCCAATGGAAATGCGCCTCCCTATTCGTAGCCCTATTAAACGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR CCA 90 bp CTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCAAGAATGTTAACGAAGCCAGTACAACCTaGCCCTTAAACTTCTCTGGT +
Preference number: 4 (lower is better)
Translates to: LPLVTFLHSITWFTKNVNEASTT*PLNFSG
Trigger: ACCAGAGAAGTTTAAGGGCCAGGTTGTACTGGCTTC...GTTAACATTCTTGGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CCA 90 bp CTTGACATCCACGACAAAAACTACCAAGTCCTCTCATTAGTGTATAATCATTCTGAAGCCAGTACAACCTaGCCCTTAAACTTCTCTGGT +
Preference number: 4 (lower is better)
Translates to: LDIHDKNYQVLSLVYNHSEASTT*PLNFSG
Trigger: ACCAGAGAAGTTTAAGGGCCAGGTTGTACTGGCTTC...AGAATGATTATACACTAATGAGAGGACTTGGTAGTTTTTGTCGTGGATGTCAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CCA 90 bp CTCTCACACAAAGTTTGCCTGACAAACTTTCTGGCCAAAATGGAAGGCACTCTGGCATCAATATCTTGTTaGATTAACTTTGTCCGTCTT +
Preference number: 4 (lower is better)
Translates to: LSHKVCLTNFLAKMEGTLASISC*INFVRL
Trigger: AAGACGGACAAAGTTAATCCAACAAGATATTGATGC...CAGAGTGCCTTCCATTTTGGCCAGAAAGTTTGTCAGGCAAACTTTGTGTGAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR CCA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGCAGCTCCTTCCTTTTTaGCACCTTCCACAGGTTTTG +
Preference number: 4 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRQLLPF*HLPQVL
Trigger: CAAAACCTGTGGAAGGTGCCAAAAAGGAAGGAGCTG...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CCA 90 bp CTTGACATCCACGACAAAAACTACCAAGTCCTCTCATTAGTGTATAATCATTCTCAGCTCCTTCCTTTTTaGCACCTTCCACAGGTTTTG +
Preference number: 4 (lower is better)
Translates to: LDIHDKNYQVLSLVYNHSQLLPF*HLPQVL
Trigger: CAAAACCTGTGGAAGGTGCCAAAAAGGAAGGAGCTG...AGAATGATTATACACTAATGAGAGGACTTGGTAGTTTTTGTCGTGGATGTCAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CCA 90 bp AACATGTCATTTCTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCCAGCTCCTTCCTTTTTaGCACCTTCCACAGGTTTTG +
Preference number: 4 (lower is better)
Translates to: NMSFLPLVTFLHSITWFTQLLPF*HLPQVL
Trigger: CAAAACCTGTGGAAGGTGCCAAAAAGGAAGGAGCTG...GGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAGAAATGACATGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CCA 90 bp AATACAAAATCTTCAAATGGACATTGCCAGTCTACACACATAAGGCCCAGGATTCTTGGAAGGTACTACTaGCCATATCTACGATTCCAC +
Preference number: 4 (lower is better)
Translates to: NTKSSNGHCQSTHIRPRILGRYY*PYLRFH
Trigger: GTGGAATCGTAGATATGGCCAGTAGTACCTTCCAAG...AATCCTGGGCCTTATGTGTGTAGACTGGCAATGTCCATTTGAAGATTTTGTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR CCA 90 bp GAACCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCTCCAACATTTGTTCATaGGTTAAAGCCTTTTGGCGG +
Preference number: 4 (lower is better)
Translates to: EPLSHINKNRANQACPHLSNICS*VKAFWR
Trigger: CCGCCAAAAGGCTTTAACCCATGAACAAATGTTGGA...GAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGGTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTCCAGTTTGGGCGTTTTaGGCTCTGATTCTGCATAAG +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFPVWAF*ALILHK
Trigger: CTTATGCAGAATCAGAGCTCAAAACGCCCAAACTGG...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR TCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAACCAGTTTGGGCGTTTTaGGCTCTGATTCTGCATAAG +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKPVWAF*ALILHK
Trigger: CTTATGCAGAATCAGAGCTCAAAACGCCCAAACTGG...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR TCA 90 bp GAACCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCTTAGCCAACTCAACATaGATATCCATGGGTTGCAAT +
Preference number: 4 (lower is better)
Translates to: EPLSHINKNRANQACPHLLANST*ISMGCN
Trigger: ATTGCAACCCATGGATATTCATGTTGAGTTGGCTAA...GAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGGTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGCAAAGGAAGTCCTCCTaGCACTTTAAATCTGGCCAT +
Preference number: 4 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRQRKSS*HFKSGH
Trigger: ATGGCCAGATTTAAAGTGTCAGGAGGACTTCCTTTG...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR TCA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGGAGGAATCCAGTCCTTaGATCTTGATTTCGGCGATA +
Preference number: 4 (lower is better)
Translates to: PQVFICSQSHYYEKFRWREESSP*ILISAI
Trigger: TATCGCCGAAATCAAGATTCAAGGACTGGATTCCTC...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR TCA 90 bp CCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCCATGACACAGCTTTCTTATaGACTGTCTTTGGATCAACA +
Preference number: 4 (lower is better)
Translates to: PLSHINKNRANQACPHLHDTAFL*TVFGST
Trigger: TGTTGATCCAAAGACAGTTCATAAGAAAGCTGTGTC...ATGGAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAATGCTGGATACAGCTTTaGCAGCGATACTTCTGGACT +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKCWIQL*QRYFWT
Trigger: AGTCCAGAAGTATCGCTGTCAAAGCTGTATCCAGCA...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR TCA 90 bp AACATGTCATTTCTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCTCTCAATTCCTTCTCTaGGATCATCAAGGGTGCATG +
Preference number: 4 (lower is better)
Translates to: NMSFLPLVTFLHSITWFTSQFLL*DHQGCM
Trigger: CATGCACCCTTGATGATCTCAGAGAAGGAATTGAGA...GGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAGAAATGACATGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR TCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTCATCTTTCTCTATCTTaGCCTTCCCTGTGGCAGTCT +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFHLSLS*PSLWQS
Trigger: AGACTGCCACAGGGAAGGTCAAGATAGAGAAAGATG...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR TCA 90 bp AACATGTCATTTCTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCCCACTTCTGGATCTGTaGTCATGGCCTTTAAAGTCA +
Preference number: 4 (lower is better)
Translates to: NMSFLPLVTFLHSITWFTPLLDL*SWPLKS
Trigger: TGACTTTAAAGGCCATGATCACAGATCCAGAAGTGG...GGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAGAAATGACATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR TCA 90 bp CTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCAAGAATGTTAACCCACTTCTGGATCTGTaGTCATGGCCTTTAAAGTCA +
Preference number: 4 (lower is better)
Translates to: LPLVTFLHSITWFTKNVNPLLDL*SWPLKS
Trigger: TGACTTTAAAGGCCATGATCACAGATCCAGAAGTGG...GTTAACATTCTTGGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR TCA 90 bp GTAACAGTATCTGCTTCTGAGCTCAATAAAGGCTTTCATCTATTAAACGCAGAACCACTTCTGGATCTGTaGTCATGGCCTTTAAAGTCA +
Preference number: 4 (lower is better)
Translates to: VTVSASELNKGFHLLNAEPLLDL*SWPLKS
Trigger: TGACTTTAAAGGCCATGATCACAGATCCAGAAGTGG...TTCTGCGTTTAATAGATGAAAGCCTTTATTGAGCTCAGAAGCAGATACTGTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR TCA 90 bp CTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCAAGAATGTTAACTTCGAGTTTGGATGTTaGCAGAGAAAGGTTGCACTG +
Preference number: 4 (lower is better)
Translates to: LPLVTFLHSITWFTKNVNFEFGC*QRKVAL
Trigger: CAGTGCAACCTTTCTCTGTCAACATCCAAACTCGAA...GTTAACATTCTTGGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR TCA 90 bp AACATGTCATTTCTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCTTCGAGTTTGGATGTTaGCAGAGAAAGGTTGCACTG +
Preference number: 4 (lower is better)
Translates to: NMSFLPLVTFLHSITWFTFEFGC*QRKVAL
Trigger: CAGTGCAACCTTTCTCTGTCAACATCCAAACTCGAA...GGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAGAAATGACATGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR TCA 90 bp GTAACAGTATCTGCTTCTGAGCTCAATAAAGGCTTTCATCTATTAAACGCAGAATTCGAGTTTGGATGTTaGCAGAGAAAGGTTGCACTG +
Preference number: 4 (lower is better)
Translates to: VTVSASELNKGFHLLNAEFEFGC*QRKVAL
Trigger: CAGTGCAACCTTTCTCTGTCAACATCCAAACTCGAA...TTCTGCGTTTAATAGATGAAAGCCTTTATTGAGCTCAGAAGCAGATACTGTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR TCA 90 bp TGCCTGACAAACTTTCTGGCCAAAATGGAAGGCACTCTGAAGAAGCAATATAGTAATGTTCAATGCCTTTaGAGCTTTCCGTTATTTCTG +
Preference number: 4 (lower is better)
Translates to: CLTNFLAKMEGTLKKQYSNVQCL*SFPLFL
Trigger: CAGAAATAACGGAAAGCTTCAAAGGCATTGAACATT...ACTATATTGCTTCTTCAGAGTGCCTTCCATTTTGGCCAGAAAGTTTGTCAGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR TCA 90 bp CTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCAAGAATGTTAACGGAAGCCCATTACTCTaGGATTACAATTGGGCTTCA +
Preference number: 4 (lower is better)
Translates to: LPLVTFLHSITWFTKNVNGSPLL*DYNWAS
Trigger: TGAAGCCCAATTGTAATCTCAGAGTAATGGGCTTCC...GTTAACATTCTTGGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR TCA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGATAGATAGGTTCCCTTaGCTTGAAGGTACCATGCTG +
Preference number: 4 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRIDRFP*LEGTML
Trigger: CAGCATGGTACCTTCAAGTCAAGGGAACCTATCTAT...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR TCA 90 bp GTAACAGTATCTGCTTCTGAGCTCAATAAAGGCTTTCATCTATTAAACGCAGAAGTACAATGGTCAGAGTaGAGAAGGAGCTTTCTTGAC +
Preference number: 4 (lower is better)
Translates to: VTVSASELNKGFHLLNAEVQWSE*RRSFLD
Trigger: GTCAAGAAAGCTCCTTCTTCACTCTGACCATTGTAC...TTCTGCGTTTAATAGATGAAAGCCTTTATTGAGCTCAGAAGCAGATACTGTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000645819.1
ENST00000649766.1
CDS-3UTR TCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAGACAGAGTCAGAATaGCTGGCATTGGGATTCCGT +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFKTESE*LALGFR
Trigger: ACGGAATCCCAATGCCAGTCATTCTGACTCTGTCTT...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR TCA 90 bp TATGCTTTTCAACAGCAAGTTGACAGAATGAACTGCAAACATTTCCTGTTTTTCAAGACAGAGTCAGAATaGCTGGCATTGGGATTCCGT +
Preference number: 4 (lower is better)
Translates to: YAFQQQVDRMNCKHFLFFKTESE*LALGFR
Trigger: ACGGAATCCCAATGCCAGTCATTCTGACTCTGTCTT...GAAAAACAGGAAATGTTTGCAGTTCATTCTGTCAACTTGCTGTTGAAAAGCATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR TCA 90 bp CCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCCATGTAGATTCTTTGTACTaGTGCTCTAAGATTCCAGCT +
Preference number: 4 (lower is better)
Translates to: PLSHINKNRANQACPHLHVDSLY*CSKIPA
Trigger: AGCTGGAATCTTAGAGCATCAGTACAAAGAATCTAC...ATGGAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTACTGCAACATGCATCTaGCTTCCCTGCTCCTATGAA +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFTATCI*LPCSYE
Trigger: TTCATAGGAGCAGGGAAGTCAGATGCATGTTGCAGT...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR TCA 90 bp ACCATAATACACTTTAGAAAACTTGTCTTCAGCACTACTAAAAACCCACTACACACTGCAACATGCATCTaGCTTCCCTGCTCCTATGAA +
Preference number: 4 (lower is better)
Translates to: TIIHFRKLVFSTTKNPLHTATCI*LPCSYE
Trigger: TTCATAGGAGCAGGGAAGTCAGATGCATGTTGCAGT...GTGTAGTGGGTTTTTAGTAGTGCTGAAGACAAGTTTTCTAAAGTGTATTATGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR TCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAAACTGCAACATGCATCTaGCTTCCCTGCTCCTATGAA +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKTATCI*LPCSYE
Trigger: TTCATAGGAGCAGGGAAGTCAGATGCATGTTGCAGT...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR TCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAAGAAGCTGACTTCTACTaGTGGACACTGCAACATGCA +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKEADFY*WTLQHA
Trigger: TGCATGTTGCAGTGTCCATCAGTAGAAGTCAGCTTC...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR TCA 90 bp CTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCAAGAATGTTAACCACTCTGTTTGTATGTaGGGATGTCCCATGGTGTAT +
Preference number: 4 (lower is better)
Translates to: LPLVTFLHSITWFTKNVNHSVCM*GCPMVY
Trigger: ATACACCATGGGACATCCTCACATACAAACAGAGTG...GTTAACATTCTTGGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR TCA 90 bp CTTGACATCCACGACAAAAACTACCAAGTCCTCTCATTAGTGTATAATCATTCTCACTCTGTTTGTATGTaGGGATGTCCCATGGTGTAT +
Preference number: 4 (lower is better)
Translates to: LDIHDKNYQVLSLVYNHSHSVCM*GCPMVY
Trigger: ATACACCATGGGACATCCTCACATACAAACAGAGTG...AGAATGATTATACACTAATGAGAGGACTTGGTAGTTTTTGTCGTGGATGTCAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000645819.1
ENST00000649766.1
CDS-3UTR TCA 90 bp AACATGTCATTTCTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCGACCATTTCTTCTGGTaGCCCACTCTGTTTGTATGT +
Preference number: 4 (lower is better)
Translates to: NMSFLPLVTFLHSITWFTDHFFW*PTLFVC
Trigger: ACATACAAACAGAGTGGGTCACCAGAAGAAATGGTC...GGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAGAAATGACATGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR TCA 90 bp CTTGACATCCACGACAAAAACTACCAAGTCCTCTCATTAGTGTATAATCATTCTGACCATTTCTTCTGGTaGCCCACTCTGTTTGTATGT +
Preference number: 4 (lower is better)
Translates to: LDIHDKNYQVLSLVYNHSDHFFW*PTLFVC
Trigger: ACATACAAACAGAGTGGGTCACCAGAAGAAATGGTC...AGAATGATTATACACTAATGAGAGGACTTGGTAGTTTTTGTCGTGGATGTCAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000645819.1
ENST00000649766.1
CDS-3UTR TCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAGGCAACATCATCGGTaGAAAGCAAAACTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFRQHHR*KAKLSG
Trigger: GCCAGAGAGTTTTGCTTTTCACCGATGATGTTGCCT...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR TCA 90 bp AACATGTCATTTCTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCTTCATTGTTAACCAGTaGAAGCCCAAGACTGTGGAG +
Preference number: 4 (lower is better)
Translates to: NMSFLPLVTFLHSITWFTFIVNQ*KPKTVE
Trigger: CTCCACAGTCTTGGGCTTTCACTGGTTAACAATGAA...GGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAGAAATGACATGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR TCA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTTCATTGTTAACCAGTaGAAGCCCAAGACTGTGGAG +
Preference number: 4 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRFIVNQ*KPKTVE
Trigger: CTCCACAGTCTTGGGCTTTCACTGGTTAACAATGAA...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR TCA 90 bp TGCCTGACAAACTTTCTGGCCAAAATGGAAGGCACTCTGAAGAAGCAATATAGTTTTAAGGCCATTTCCTaGATGAGGACCATAAAATAC +
Preference number: 4 (lower is better)
Translates to: CLTNFLAKMEGTLKKQYSFKAIS*MRTIKY
Trigger: GTATTTTATGGTCCTCATTCAGGAAATGGCCTTAAA...ACTATATTGCTTCTTCAGAGTGCCTTCCATTTTGGCCAGAAAGTTTGTCAGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR TCA 90 bp GAACCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCGCTCCTAGAAACCCTTaGTCAATTTTTAAGGCCATT +
Preference number: 4 (lower is better)
Translates to: EPLSHINKNRANQACPHLAPRNP*SIFKAI
Trigger: AATGGCCTTAAAAATTGATCAAGGGTTTCTAGGAGC...GAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGGTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGAGATACTTCCTCAGTTaGTTCTGCTGCCCTCTGAAT +
Preference number: 4 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRRYFLS*FCCPLN
Trigger: ATTCAGAGGGCAGCAGAATCAACTGAGGAAGTATCT...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR TCA 90 bp AACATGTCATTTCTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCAGATACTTCCTCAGTTaGTTCTGCTGCCCTCTGAAT +
Preference number: 4 (lower is better)
Translates to: NMSFLPLVTFLHSITWFTRYFLS*FCCPLN
Trigger: ATTCAGAGGGCAGCAGAATCAACTGAGGAAGTATCT...GGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAGAAATGACATGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR TCA 90 bp GTAACAGTATCTGCTTCTGAGCTCAATAAAGGCTTTCATCTATTAAACGCAGAAAGATACTTCCTCAGTTaGTTCTGCTGCCCTCTGAAT +
Preference number: 4 (lower is better)
Translates to: VTVSASELNKGFHLLNAERYFLS*FCCPLN
Trigger: ATTCAGAGGGCAGCAGAATCAACTGAGGAAGTATCT...TTCTGCGTTTAATAGATGAAAGCCTTTATTGAGCTCAGAAGCAGATACTGTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000645819.1
ENST00000649766.1
CDS-3UTR TCA 90 bp CCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCCATCAAGATAAAGCAGAGTaGCTTATAGACAAGACCAGT +
Preference number: 4 (lower is better)
Translates to: PLSHINKNRANQACPHLHQDKAE*LIDKTS
Trigger: ACTGGTCTTGTCTATAAGTCACTCTGCTTTATCTTG...ATGGAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp TCGTTTAATAGGGCTACGAATAGGGAGGCGCATTTCCATTGGATCTTTATCAAACAAGATAAAGCAGAGTaGCTTATAGACAAGACCAGT +
Preference number: 4 (lower is better)
Translates to: SFNRATNREAHFHWIFIKQDKAE*LIDKTS
Trigger: ACTGGTCTTGTCTATAAGTCACTCTGCTTTATCTTG...TTTGATAAAGATCCAATGGAAATGCGCCTCCCTATTCGTAGCCCTATTAAACGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR TCA 90 bp CTTGACATCCACGACAAAAACTACCAAGTCCTCTCATTAGTGTATAATCATTCTATCTCATCTTCAGAATaGGTCTCAGAGAGGAGTGCA +
Preference number: 4 (lower is better)
Translates to: LDIHDKNYQVLSLVYNHSISSSE*VSERSA
Trigger: TGCACTCCTCTCTGAGACTCATTCTGAAGATGAGAT...AGAATGATTATACACTAATGAGAGGACTTGGTAGTTTTTGTCGTGGATGTCAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR GCA 90 bp CCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCCATTGGCTTATCTTTTTCTaGTGCTTTTTGAAGGGCTTC +
Preference number: 4 (lower is better)
Translates to: PLSHINKNRANQACPHLHWLIFF*CFLKGF
Trigger: GAAGCCCTTCAAAAAGCAGCAGAAAAAGATAAGCCA...ATGGAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000249837.7
CDS-3UTR GCA 90 bp CTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCAAGAATGTTAACGCTGAGATACTTGAGTaGCCAGGCCAATTATCTGAA +
Preference number: 4 (lower is better)
Translates to: LPLVTFLHSITWFTKNVNAEILE*PGQLSE
Trigger: TTCAGATAATTGGCCTGGGCACTCAAGTATCTCAGC...GTTAACATTCTTGGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR GCA 90 bp ACCATAATACACTTTAGAAAACTTGTCTTCAGCACTACTAAAAACCCACTACACTACCTTAAGTGCTTGTaGTCCTGGTCGCTGAGATAC +
Preference number: 4 (lower is better)
Translates to: TIIHFRKLVFSTTKNPLHYLKCL*SWSLRY
Trigger: GTATCTCAGCGACCAGGAGCACAAGCACTTAAGGTA...GTGTAGTGGGTTTTTAGTAGTGCTGAAGACAAGTTTTCTAAAGTGTATTATGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR GCA 90 bp CCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCCATGATGGCACAATATCCTaGTGTCTCAAACCTGTTATA +
Preference number: 4 (lower is better)
Translates to: PLSHINKNRANQACPHLHDGTIS*CLKPVI
Trigger: TATAACAGGTTTGAGACAGCAGGATATTGTGCCATC...ATGGAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR GCA 90 bp AACATGTCATTTCTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCCGGGCAAAAAGTGACTaGTTTCTTGACTGGAGAGAA +
Preference number: 4 (lower is better)
Translates to: NMSFLPLVTFLHSITWFTRAKSD*FLDWRE
Trigger: TTCTCTCCAGTCAAGAAAGCAGTCACTTTTTGCCCG...GGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAGAAATGACATGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR GCA 90 bp CTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCAAGAATGTTAACCGGGCAAAAAGTGACTaGTTTCTTGACTGGAGAGAA +
Preference number: 4 (lower is better)
Translates to: LPLVTFLHSITWFTKNVNRAKSD*FLDWRE
Trigger: TTCTCTCCAGTCAAGAAAGCAGTCACTTTTTGCCCG...GTTAACATTCTTGGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR GCA 90 bp CTTGACATCCACGACAAAAACTACCAAGTCCTCTCATTAGTGTATAATCATTCTCGGGCAAAAAGTGACTaGTTTCTTGACTGGAGAGAA +
Preference number: 4 (lower is better)
Translates to: LDIHDKNYQVLSLVYNHSRAKSD*FLDWRE
Trigger: TTCTCTCCAGTCAAGAAAGCAGTCACTTTTTGCCCG...AGAATGATTATACACTAATGAGAGGACTTGGTAGTTTTTGTCGTGGATGTCAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR GCA 90 bp AACATGTCATTTCTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCTGTGGCAAGCTAGCCTaGAAAATAGTTCTTGACAGC +
Preference number: 4 (lower is better)
Translates to: NMSFLPLVTFLHSITWFTCGKLA*KIVLDS
Trigger: GCTGTCAAGAACTATTTTGCAGGCTAGCTTGCCACA...GGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAGAAATGACATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR GCA 90 bp CTTGACATCCACGACAAAAACTACCAAGTCCTCTCATTAGTGTATAATCATTCTTGTGGCAAGCTAGCCTaGAAAATAGTTCTTGACAGC +
Preference number: 4 (lower is better)
Translates to: LDIHDKNYQVLSLVYNHSCGKLA*KIVLDS
Trigger: GCTGTCAAGAACTATTTTGCAGGCTAGCTTGCCACA...AGAATGATTATACACTAATGAGAGGACTTGGTAGTTTTTGTCGTGGATGTCAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR GCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAATCCATCCCTGGAATTTaGACATACCATGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKSIPGI*TYHAAA
Trigger: AGCAGCAGCATGGTATGTGCAAATTCCAGGGATGGA...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR GCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAAACTCTTACAGTCTCCTaGACAGACTGTGTAGGGCTT +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKTLTVS*TDCVGL
Trigger: AAGCCCTACACAGTCTGTGCAGGAGACTGTAAGAGT...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR GCA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTTGACAGAGAAAGGTTaGACTGAAACGAGGCTGTCA +
Preference number: 4 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRLTEKG*TETRLS
Trigger: TGACAGCCTCGTTTCAGTGCAACCTTTCTCTGTCAA...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR GCA 90 bp CCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCCATTTCCGTTATTTCTGTTaGCGTGTCAACACCAAGAAA +
Preference number: 4 (lower is better)
Translates to: PLSHINKNRANQACPHLHFRYFC*RVNTKK
Trigger: TTTCTTGGTGTTGACACGGCAACAGAAATAACGGAA...ATGGAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR GCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAAGACTTGAAGGTACCATaGTGGCATACTCCAGTTCCA +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKDLKVP*WHTPVP
Trigger: TGGAACTGGAGTATGCCAGCATGGTACCTTCAAGTC...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR GCA 90 bp CTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCAAGAATGTTAACTCTACTGATGGACACTaGAACATGCATCTGACTTCC +
Preference number: 4 (lower is better)
Translates to: LPLVTFLHSITWFTKNVNSTDGH*NMHLTS
Trigger: GGAAGTCAGATGCATGTTGCAGTGTCCATCAGTAGA...GTTAACATTCTTGGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR GCA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGCCACTGATTCTCGAATaGAGAACATCAGCAGTACTG +
Preference number: 4 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRPLILE*RTSAVL
Trigger: CAGTACTGCTGATGTTCTGCATTCGAGAATCAGTGG...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR GCA 90 bp GTAACAGTATCTGCTTCTGAGCTCAATAAAGGCTTTCATCTATTAAACGCAGAACCACTGATTCTCGAATaGAGAACATCAGCAGTACTG +
Preference number: 4 (lower is better)
Translates to: VTVSASELNKGFHLLNAEPLILE*RTSAVL
Trigger: CAGTACTGCTGATGTTCTGCATTCGAGAATCAGTGG...TTCTGCGTTTAATAGATGAAAGCCTTTATTGAGCTCAGAAGCAGATACTGTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000645819.1
ENST00000649766.1
CDS-3UTR GCA 90 bp CTTGACATCCACGACAAAAACTACCAAGTCCTCTCATTAGTGTATAATCATTCTCCACTGATTCTCGAATaGAGAACATCAGCAGTACTG +
Preference number: 4 (lower is better)
Translates to: LDIHDKNYQVLSLVYNHSPLILE*RTSAVL
Trigger: CAGTACTGCTGATGTTCTGCATTCGAGAATCAGTGG...AGAATGATTATACACTAATGAGAGGACTTGGTAGTTTTTGTCGTGGATGTCAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000645819.1
ENST00000649766.1
CDS-3UTR GCA 90 bp CTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCAAGAATGTTAACGTCCATTCCAGTTTTTaGCCTGGTATTTCACCAGGA +
Preference number: 4 (lower is better)
Translates to: LPLVTFLHSITWFTKNVNVHSSF*PGISPG
Trigger: TCCTGGTGAAATACCAGGGCAAAAACTGGAATGGAC...GTTAACATTCTTGGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR GCA 90 bp GTAACAGTATCTGCTTCTGAGCTCAATAAAGGCTTTCATCTATTAAACGCAGAAGTCCATTCCAGTTTTTaGCCTGGTATTTCACCAGGA +
Preference number: 4 (lower is better)
Translates to: VTVSASELNKGFHLLNAEVHSSF*PGISPG
Trigger: TCCTGGTGAAATACCAGGGCAAAAACTGGAATGGAC...TTCTGCGTTTAATAGATGAAAGCCTTTATTGAGCTCAGAAGCAGATACTGTTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000645819.1
ENST00000649766.1
CDS-3UTR GCA 90 bp AACATGTCATTTCTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCCTCTCACACAAAGTTTaGCTGACAAACTTTCTGGCC +
Preference number: 4 (lower is better)
Translates to: NMSFLPLVTFLHSITWFTLSHKV*LTNFLA
Trigger: GGCCAGAAAGTTTGTCAGGCAAACTTTGTGTGAGAG...GGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAGAAATGACATGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR GCA 90 bp CTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCAAGAATGTTAACCTCTCACACAAAGTTTaGCTGACAAACTTTCTGGCC +
Preference number: 4 (lower is better)
Translates to: LPLVTFLHSITWFTKNVNLSHKV*LTNFLA
Trigger: GGCCAGAAAGTTTGTCAGGCAAACTTTGTGTGAGAG...GTTAACATTCTTGGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR GCA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGCTCTCACACAAAGTTTaGCTGACAAACTTTCTGGCC +
Preference number: 4 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRLSHKV*LTNFLA
Trigger: GGCCAGAAAGTTTGTCAGGCAAACTTTGTGTGAGAG...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR GCA 90 bp CTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCAAGAATGTTAACCATTATCAAGGCAGGTaGAGATCCCTCATGGTAATC +
Preference number: 4 (lower is better)
Translates to: LPLVTFLHSITWFTKNVNHYQGR*RSLMVI
Trigger: GATTACCATGAGGGATCTGCACCTGCCTTGATAATG...GTTAACATTCTTGGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR GCA 90 bp CTTGACATCCACGACAAAAACTACCAAGTCCTCTCATTAGTGTATAATCATTCTCATTATCAAGGCAGGTaGAGATCCCTCATGGTAATC +
Preference number: 4 (lower is better)
Translates to: LDIHDKNYQVLSLVYNHSHYQGR*RSLMVI
Trigger: GATTACCATGAGGGATCTGCACCTGCCTTGATAATG...AGAATGATTATACACTAATGAGAGGACTTGGTAGTTTTTGTCGTGGATGTCAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000645819.1
ENST00000649766.1
CDS-3UTR GCA 90 bp GTAACAGTATCTGCTTCTGAGCTCAATAAAGGCTTTCATCTATTAAACGCAGAACATTATCAAGGCAGGTaGAGATCCCTCATGGTAATC +
Preference number: 4 (lower is better)
Translates to: VTVSASELNKGFHLLNAEHYQGR*RSLMVI
Trigger: GATTACCATGAGGGATCTGCACCTGCCTTGATAATG...TTCTGCGTTTAATAGATGAAAGCCTTTATTGAGCTCAGAAGCAGATACTGTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000645819.1
ENST00000649766.1
CDS-3UTR GCA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTCCATTTCTTCTGCCTaGAGTGCTTTGGAAACCAAG +
Preference number: 4 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRSISSA*SALETK
Trigger: CTTGGTTTCCAAAGCACTGCAGGCAGAAGAAATGGA...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR GCA 90 bp CTTGACATCCACGACAAAAACTACCAAGTCCTCTCATTAGTGTATAATCATTCTTCCATTTCTTCTGCCTaGAGTGCTTTGGAAACCAAG +
Preference number: 4 (lower is better)
Translates to: LDIHDKNYQVLSLVYNHSSISSA*SALETK
Trigger: CTTGGTTTCCAAAGCACTGCAGGCAGAAGAAATGGA...AGAATGATTATACACTAATGAGAGGACTTGGTAGTTTTTGTCGTGGATGTCAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000645819.1
ENST00000649766.1
CDS-3UTR GCA 90 bp CTTGACATCCACGACAAAAACTACCAAGTCCTCTCATTAGTGTATAATCATTCTCTGTTCCATTTCTTCTaGCTGCAGTGCTTTGGAAAC +
Preference number: 4 (lower is better)
Translates to: LDIHDKNYQVLSLVYNHSLFHFF*LQCFGN
Trigger: GTTTCCAAAGCACTGCAGGCAGAAGAAATGGAACAG...AGAATGATTATACACTAATGAGAGGACTTGGTAGTTTTTGTCGTGGATGTCAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000645819.1
ENST00000649766.1
CDS-3UTR GCA 90 bp CCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCCATTCTTCAAATGGACATTaGCAGTCTACACACATAAGG +
Preference number: 4 (lower is better)
Translates to: PLSHINKNRANQACPHLHSSNGH*QSTHIR
Trigger: CCTTATGTGTGTAGACTGGCAATGTCCATTTGAAGA...ATGGAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR GCA 90 bp GAACCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCAGTCTCACTGATGACTaGTTCATCAATTTTTGCTGC +
Preference number: 4 (lower is better)
Translates to: EPLSHINKNRANQACPHLSLTDD*FINFCC
Trigger: GCAGCAAAAATTGATGAAGCAGTCATCAGTGAGACT...GAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGGTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR GCA 90 bp GTAACAGTATCTGCTTCTGAGCTCAATAAAGGCTTTCATCTATTAAACGCAGAAAGTCTCAGAGAGGAGTaGAGATTTCACAGCAATAGC +
Preference number: 4 (lower is better)
Translates to: VTVSASELNKGFHLLNAESLREE*RFHSNS
Trigger: GCTATTGCTGTGAAATCTGCACTCCTCTCTGAGACT...TTCTGCGTTTAATAGATGAAAGCCTTTATTGAGCTCAGAAGCAGATACTGTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR GCA 90 bp CTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCAAGAATGTTAACAGTCTCAGAGAGGAGTaGAGATTTCACAGCAATAGC +
Preference number: 4 (lower is better)
Translates to: LPLVTFLHSITWFTKNVNSLREE*RFHSNS
Trigger: GCTATTGCTGTGAAATCTGCACTCCTCTCTGAGACT...GTTAACATTCTTGGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR CCA 90 bp CCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCCATTTCAGGGTCATAATATaGGCAACATACTGCTTAGGT +
Preference number: 4 (lower is better)
Translates to: PLSHINKNRANQACPHLHFRVII*ATYCLG
Trigger: ACCTAAGCAGTATGTTGCCCATATTATGACCCTGAA...ATGGAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CCA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTCTGACTTTTCATGGTaGAAACCCGTCTGTGGAACT +
Preference number: 4 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRSDFSW*KPVCGT
Trigger: AGTTCCACAGACGGGTTTCCACCATGAAAAGTCAGA...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CCA 90 bp GTAACAGTATCTGCTTCTGAGCTCAATAAAGGCTTTCATCTATTAAACGCAGAATCTGACTTTTCATGGTaGAAACCCGTCTGTGGAACT +
Preference number: 4 (lower is better)
Translates to: VTVSASELNKGFHLLNAESDFSW*KPVCGT
Trigger: AGTTCCACAGACGGGTTTCCACCATGAAAAGTCAGA...TTCTGCGTTTAATAGATGAAAGCCTTTATTGAGCTCAGAAGCAGATACTGTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR CCA 90 bp CTTGACATCCACGACAAAAACTACCAAGTCCTCTCATTAGTGTATAATCATTCTAGATCTGACTTTTCATaGTGGAAACCCGTCTGTGGA +
Preference number: 4 (lower is better)
Translates to: LDIHDKNYQVLSLVYNHSRSDFS*WKPVCG
Trigger: TCCACAGACGGGTTTCCACCATGAAAAGTCAGATCT...AGAATGATTATACACTAATGAGAGGACTTGGTAGTTTTTGTCGTGGATGTCAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR CCA 90 bp GAACCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCGAAGGGGCTTCCTTTTaGATCCTTCAATTTCATGAT +
Preference number: 4 (lower is better)
Translates to: EPLSHINKNRANQACPHLEGASF*ILQFHD
Trigger: ATCATGAAATTGAAGGATCCAAAAGGAAGCCCCTTC...GAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGGTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CCA 90 bp GTAACAGTATCTGCTTCTGAGCTCAATAAAGGCTTTCATCTATTAAACGCAGAAGGAAATAGAAGACTGTaGGATGACTATAACCGGTGC +
Preference number: 4 (lower is better)
Translates to: VTVSASELNKGFHLLNAEGNRRL*DDYNRC
Trigger: GCACCGGTTATAGTCATCCCACAGTCTTCTATTTCC...TTCTGCGTTTAATAGATGAAAGCCTTTATTGAGCTCAGAAGCAGATACTGTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR CCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAGGATGGTAGATGCCTaGCTGGATCACTGTCCTATA +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFRMVDA*LDHCPI
Trigger: TATAGGACAGTGATCCAGCCAGGCATCTACCATCCT...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CCA 90 bp ACCATAATACACTTTAGAAAACTTGTCTTCAGCACTACTAAAAACCCACTACACAGGATGGTAGATGCCTaGCTGGATCACTGTCCTATA +
Preference number: 4 (lower is better)
Translates to: TIIHFRKLVFSTTKNPLHRMVDA*LDHCPI
Trigger: TATAGGACAGTGATCCAGCCAGGCATCTACCATCCT...GTGTAGTGGGTTTTTAGTAGTGCTGAAGACAAGTTTTCTAAAGTGTATTATGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR CCA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGGTTTGCCGTCTACTTTaGACATATCAGCATAGGCCT +
Preference number: 4 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRVCRLL*TYQHRP
Trigger: AGGCCTATGCTGATATGTCCAAAGTAGACGGCAAAC...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CCA 90 bp CCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCCATAACAAATACCACTTCTaGATCTGTGATCATGGCCTT +
Preference number: 4 (lower is better)
Translates to: PLSHINKNRANQACPHLHNKYHF*ICDHGL
Trigger: AAGGCCATGATCACAGATCCAGAAGTGGTATTTGTT...ATGGAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CCA 90 bp GAACCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCTCATCTGTTCGAGTTTaGATGTTGACAGAGAAAGGT +
Preference number: 4 (lower is better)
Translates to: EPLSHINKNRANQACPHLSSVRV*MLTEKG
Trigger: ACCTTTCTCTGTCAACATCCAAACTCGAACAGATGA...GAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGGTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CCA 90 bp TCGTTTAATAGGGCTACGAATAGGGAGGCGCATTTCCATTGGATCTTTATCAAATCCAGTTCCAAATTCTaGCCAGCATCAACATCAAAA +
Preference number: 4 (lower is better)
Translates to: SFNRATNREAHFHWIFIKSSSKF*PASTSK
Trigger: TTTTGATGTTGATGCTGGCCAGAATTTGGAACTGGA...TTTGATAAAGATCCAATGGAAATGCGCCTCCCTATTCGTAGCCCTATTAAACGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR CCA 90 bp CTTGACATCCACGACAAAAACTACCAAGTCCTCTCATTAGTGTATAATCATTCTCAGAGTCAGAATGACTaGCATTGGGATTCCGTACAT +
Preference number: 4 (lower is better)
Translates to: LDIHDKNYQVLSLVYNHSQSQND*HWDSVH
Trigger: ATGTACGGAATCCCAATGCCAGTCATTCTGACTCTG...AGAATGATTATACACTAATGAGAGGACTTGGTAGTTTTTGTCGTGGATGTCAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTTCTTCTGAACGATACTaGAGAACCCGGGTAGTCTTG +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFSSERY*RTRVVL
Trigger: CAAGACTACCCGGGTTCTCCAGTATCGTTCAGAAGA...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CCA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGCCAATGAGAAACTACTaGACCAGGCACTGGTTGAAA +
Preference number: 4 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRPMRNY*TRHWLK
Trigger: TTTCAACCAGTGCCTGGTCCAGTAGTTTCTCATTGG...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTGGTACTCCATATTGTTaGCAGGACACTTCACACACC +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFGTPYC*QDTSHT
Trigger: GGTGTGTGAAGTGTCCTGCCAACAATATGGAGTACC...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAAGGTACTCCATATTGTTaGCAGGACACTTCACACACC +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKGTPYC*QDTSHT
Trigger: GGTGTGTGAAGTGTCCTGCCAACAATATGGAGTACC...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CCA 90 bp GAACCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCTGTGAGGATGTCCCATaGTGTATGGTTCATTATCAA +
Preference number: 4 (lower is better)
Translates to: EPLSHINKNRANQACPHLCEDVP*CMVHYQ
Trigger: TTGATAATGAACCATACACCATGGGACATCCTCACA...GAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGGTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTGAAGCCAGTACAACCTaGCCCTTAAACTTCTCTGGT +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFEASTT*PLNFSG
Trigger: ACCAGAGAAGTTTAAGGGCCAGGTTGTACTGGCTTC...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CCA 90 bp ACCATAATACACTTTAGAAAACTTGTCTTCAGCACTACTAAAAACCCACTACACGAAGCCAGTACAACCTaGCCCTTAAACTTCTCTGGT +
Preference number: 4 (lower is better)
Translates to: TIIHFRKLVFSTTKNPLHEASTT*PLNFSG
Trigger: ACCAGAGAAGTTTAAGGGCCAGGTTGTACTGGCTTC...GTGTAGTGGGTTTTTAGTAGTGCTGAAGACAAGTTTTCTAAAGTGTATTATGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR CCA 90 bp TATGCTTTTCAACAGCAAGTTGACAGAATGAACTGCAAACATTTCCTGTTTTTCGAAGCCAGTACAACCTaGCCCTTAAACTTCTCTGGT +
Preference number: 4 (lower is better)
Translates to: YAFQQQVDRMNCKHFLFFEASTT*PLNFSG
Trigger: ACCAGAGAAGTTTAAGGGCCAGGTTGTACTGGCTTC...GAAAAACAGGAAATGTTTGCAGTTCATTCTGTCAACTTGCTGTTGAAAAGCATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR CCA 90 bp GAACCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCTTCAGGGTCTGTTGTTaGGGTAAACAGTGCAATAAT +
Preference number: 4 (lower is better)
Translates to: EPLSHINKNRANQACPHLFRVCC*GKQCNN
Trigger: ATTATTGCACTGTTTACCCCAACAACAGACCCTGAA...GAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGGTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CCA 90 bp AACATGTCATTTCTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCTGTCTCCAAAATCTCTaGGCTGTCGACTCAACTCTT +
Preference number: 4 (lower is better)
Translates to: NMSFLPLVTFLHSITWFTCLQNL*AVDSTL
Trigger: AAGAGTTGAGTCGACAGCCCAGAGATTTTGGAGACA...GGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAGAAATGACATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CCA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGTCTCCAAAATCTCTaGGCTGTCGACTCAACTCTT +
Preference number: 4 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRCLQNL*AVDSTL
Trigger: AAGAGTTGAGTCGACAGCCCAGAGATTTTGGAGACA...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAACAGCTCCTTCCTTTTTaGCACCTTCCACAGGTTTTG +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKQLLPF*HLPQVL
Trigger: CAAAACCTGTGGAAGGTGCCAAAAAGGAAGGAGCTG...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CCA 90 bp AACATGTCATTTCTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCCTTGGAAGGTACTACTaGCCATATCTACGATTCCAC +
Preference number: 4 (lower is better)
Translates to: NMSFLPLVTFLHSITWFTLGRYY*PYLRFH
Trigger: GTGGAATCGTAGATATGGCCAGTAGTACCTTCCAAG...GGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAGAAATGACATGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CCA 90 bp CTTGACATCCACGACAAAAACTACCAAGTCCTCTCATTAGTGTATAATCATTCTCTTGGAAGGTACTACTaGCCATATCTACGATTCCAC +
Preference number: 4 (lower is better)
Translates to: LDIHDKNYQVLSLVYNHSLGRYY*PYLRFH
Trigger: GTGGAATCGTAGATATGGCCAGTAGTACCTTCCAAG...AGAATGATTATACACTAATGAGAGGACTTGGTAGTTTTTGTCGTGGATGTCAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CCA 90 bp CTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCAAGAATGTTAACACTGTGCATCCTCAATaGCATTACATGCTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: LPLVTFLHSITWFTKNVNTVHPQ*HYMLSL
Trigger: CAGAGAGAGCATGTAATGCCATTGAGGATGCACAGT...GTTAACATTCTTGGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
3UTR CAA 72 bp CCACAATTTTCCTCTATCAGTGAATGTTCAATGCCTTaGAAGCTTTCCGTTATTTCTGTTGCCGTGTCAACA +
Preference number: 4 (lower is better)
Translates to: PQFSSISECSMP*KLSVISVAVST
Trigger: TGTTGACACGGCAACAGAAATAACGGAAAGCTTCAAAGGCATTGAACATTCACTGATAGAGGAAAATTGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
3UTR CAA 72 bp AGGGTAACTATTCGTGAAAGGTTGAAACTGCTCATTTaGATGCTAACACCAACCAGGTACTCCATATTGTTG +
Preference number: 4 (lower is better)
Translates to: RVTIRERLKLLI*MLTPTRYSILL
Trigger: CAACAATATGGAGTACCTGGTTGGTGTTAGCATCAAAATGAGCAGTTTCAACCTTTCACGAATAGTTACCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR TCA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTTTTCTGCTGCTTTTTaGAGGGCTTCTTCAATTCGG +
Preference number: 4 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRFSAAF*RASSIR
Trigger: CCGAATTGAAGAAGCCCTTCAAAAAGCAGCAGAAAA...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR TCA 90 bp AACATGTCATTTCTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCCAAAATCTGTTCCCTTaGTCTCTGGTAAGACATGCT +
Preference number: 4 (lower is better)
Translates to: NMSFLPLVTFLHSITWFTQNLFP*SLVRHA
Trigger: AGCATGTCTTACCAGAGATCAAGGGAACAGATTTTG...GGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAGAAATGACATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp GTAACAGTATCTGCTTCTGAGCTCAATAAAGGCTTTCATCTATTAAACGCAGAACAAAATCTGTTCCCTTaGTCTCTGGTAAGACATGCT +
Preference number: 4 (lower is better)
Translates to: VTVSASELNKGFHLLNAEQNLFP*SLVRHA
Trigger: AGCATGTCTTACCAGAGATCAAGGGAACAGATTTTG...TTCTGCGTTTAATAGATGAAAGCCTTTATTGAGCTCAGAAGCAGATACTGTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR TCA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGGAGTTTTGCAGAGGCTaGTATTGGCTGGAAAATGTA +
Preference number: 4 (lower is better)
Translates to: PQVFICSQSHYYEKFRWREFCRG*YWLENV
Trigger: TACATTTTCCAGCCAATATCAGCCTCTGCAAAACTC...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR TCA 90 bp CCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCCATATCATACTTAAGTACTaGGGTTTGGTCAGTTCAATG +
Preference number: 4 (lower is better)
Translates to: PLSHINKNRANQACPHLHIILKY*GLVSSM
Trigger: CATTGAACTGACCAAACCTCAGTACTTAAGTATGAT...ATGGAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp GAACCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCAACCATATAATCCACTaGCTCCAAAAGGTCAATCAT +
Preference number: 4 (lower is better)
Translates to: EPLSHINKNRANQACPHLNHIIH*LQKVNH
Trigger: ATGATTGACCTTTTGGAGTCAGTGGATTATATGGTT...GAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGGTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp CCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCCATAACCATATAATCCACTaGCTCCAAAAGGTCAATCAT +
Preference number: 4 (lower is better)
Translates to: PLSHINKNRANQACPHLHNHIIH*LQKVNH
Trigger: ATGATTGACCTTTTGGAGTCAGTGGATTATATGGTT...ATGGAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp GAACCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCTTTTATGTTACTCCATaGCCACATCTGTGTATACCT +
Preference number: 4 (lower is better)
Translates to: EPLSHINKNRANQACPHLFYVTP*PHLCIP
Trigger: AGGTATACACAGATGTGGTCATGGAGTAACATAAAA...GAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGGTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp CCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCCATCAATATATGCATAGTTaGTGGATGCTGAAATCGACA +
Preference number: 4 (lower is better)
Translates to: PLSHINKNRANQACPHLHQYMHS*WMLKST
Trigger: TGTCGATTTCAGCATCCATCAACTATGCATATATTG...ATGGAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp GAACCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCCAATATATGCATAGTTaGTGGATGCTGAAATCGACA +
Preference number: 4 (lower is better)
Translates to: EPLSHINKNRANQACPHLQYMHS*WMLKST
Trigger: TGTCGATTTCAGCATCCATCAACTATGCATATATTG...GAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGGTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTCAAAGGAAGTCCTCCTaGCACTTTAAATCTGGCCAT +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFQRKSS*HFKSGH
Trigger: ATGGCCAGATTTAAAGTGTCAGGAGGACTTCCTTTG...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR TCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAAGAAGAGCTAATCAAGTaGAGGGGCTTCCTTTTGGAT +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKEELIK*RGFLLD
Trigger: ATCCAAAAGGAAGCCCCTTCACTTGATTAGCTCTTC...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR TCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTGAAGAGCTAATCAAGTaGAGGGGCTTCCTTTTGGAT +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFEELIK*RGFLLD
Trigger: ATCCAAAAGGAAGCCCCTTCACTTGATTAGCTCTTC...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR TCA 90 bp CCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCCATTTTCGTTGCAAACAATaGCACAGAAAGCATTCAACT +
Preference number: 4 (lower is better)
Translates to: PLSHINKNRANQACPHLHFRCKQ*HRKHST
Trigger: AGTTGAATGCTTTCTGTGTCATTGTTTGCAACGAAA...ATGGAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGCCAGTCCTTGAATCTTaGTTTCGGCGATATTGTTCT +
Preference number: 4 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRPVLES*FRRYCS
Trigger: AGAACAATATCGCCGAAATCAAGATTCAAGGACTGG...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR TCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTGAGGAATCCAGTCCTTaGATCTTGATTTCGGCGATA +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFEESSP*ILISAI
Trigger: TATCGCCGAAATCAAGATTCAAGGACTGGATTCCTC...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR TCA 90 bp GAACCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCATCATGTACATCTTGTaGTATAGAGATTTCAAGGGG +
Preference number: 4 (lower is better)
Translates to: EPLSHINKNRANQACPHLIMYIL*YRDFKG
Trigger: CCCCTTGAAATCTCTATATCACAAGATGTACATGAT...GAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGGTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp CTTGACATCCACGACAAAAACTACCAAGTCCTCTCATTAGTGTATAATCATTCTGAGACAGCCTTTTTGTaGATGGACTGCAAATCTACA +
Preference number: 4 (lower is better)
Translates to: LDIHDKNYQVLSLVYNHSETAFL*MDCKST
Trigger: TGTAGATTTGCAGTCCATTCACAAAAAGGCTGTCTC...AGAATGATTATACACTAATGAGAGGACTTGGTAGTTTTTGTCGTGGATGTCAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR TCA 90 bp GAACCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCGGTGATACTGAAGACTaGGGAATAATAATAACTGGT +
Preference number: 4 (lower is better)
Translates to: EPLSHINKNRANQACPHLGDTED*GIIITG
Trigger: ACCAGTTATTATTATTCCTCAGTCTTCAGTATCACC...GAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGGTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp GAACCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCACAGCTTCAACTGAGTaGGTTCGATGTTCATTTTAT +
Preference number: 4 (lower is better)
Translates to: EPLSHINKNRANQACPHLTASTE*VRCSFY
Trigger: ATAAAATGAACATCGAACTCACTCAGTTGAAGCTGT...GAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGGTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp TCGTTTAATAGGGCTACGAATAGGGAGGCGCATTTCCATTGGATCTTTATCAAAACAGCTTCAACTGAGTaGGTTCGATGTTCATTTTAT +
Preference number: 4 (lower is better)
Translates to: SFNRATNREAHFHWIFIKTASTE*VRCSFY
Trigger: ATAAAATGAACATCGAACTCACTCAGTTGAAGCTGT...TTTGATAAAGATCCAATGGAAATGCGCCTCCCTATTCGTAGCCCTATTAAACGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR TCA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGCTTGACAGCTTCAACTaGGTGAGTTCGATGTTCATT +
Preference number: 4 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRLDSFN*VSSMFI
Trigger: AATGAACATCGAACTCACTCAGTTGAAGCTGTCAAG...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR TCA 90 bp CTTGACATCCACGACAAAAACTACCAAGTCCTCTCATTAGTGTATAATCATTCTCTGCAAAATAGTTCTTaGCAGCTTCAACTGAGTGAG +
Preference number: 4 (lower is better)
Translates to: LDIHDKNYQVLSLVYNHSLQNSS*QLQLSE
Trigger: CTCACTCAGTTGAAGCTGTCAAGAACTATTTTGCAG...AGAATGATTATACACTAATGAGAGGACTTGGTAGTTTTTGTCGTGGATGTCAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR TCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTTCTCAATTCCTTCTCTaGGATCATCAAGGGTGCATG +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFSQFLL*DHQGCM
Trigger: CATGCACCCTTGATGATCTCAGAGAAGGAATTGAGA...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR TCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAATCTCAATTCCTTCTCTaGGATCATCAAGGGTGCATG +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKSQFLL*DHQGCM
Trigger: CATGCACCCTTGATGATCTCAGAGAAGGAATTGAGA...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR TCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAACCACTTCTGGATCTGTaGTCATGGCCTTTAAAGTCA +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKPLLDL*SWPLKS
Trigger: TGACTTTAAAGGCCATGATCACAGATCCAGAAGTGG...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR TCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAATTCGAGTTTGGATGTTaGCAGAGAAAGGTTGCACTG +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKFEFGC*QRKVAL
Trigger: CAGTGCAACCTTTCTCTGTCAACATCCAAACTCGAA...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR TCA 90 bp TCGTTTAATAGGGCTACGAATAGGGAGGCGCATTTCCATTGGATCTTTATCAAATATATTTTGCTTTCCTaGAGCCCACGTACATTTTTC +
Preference number: 4 (lower is better)
Translates to: SFNRATNREAHFHWIFIKYILLS*SPRTFF
Trigger: GAAAAATGTACGTGGGCTTCAGGAAAGCAAAATATA...TTTGATAAAGATCCAATGGAAATGCGCCTCCCTATTCGTAGCCCTATTAAACGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR TCA 90 bp GAACCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCAATGTTCAATGCCTTTaGAGCTTTCCGTTATTTCTG +
Preference number: 4 (lower is better)
Translates to: EPLSHINKNRANQACPHLNVQCL*SFPLFL
Trigger: CAGAAATAACGGAAAGCTTCAAAGGCATTGAACATT...GAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGGTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTGGAAGCCCATTACTCTaGGATTACAATTGGGCTTCA +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFGSPLL*DYNWAS
Trigger: TGAAGCCCAATTGTAATCTCAGAGTAATGGGCTTCC...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR TCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTATAGATAGGTTCCCTTaGCTTGAAGGTACCATGCTG +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFIDRFP*LEGTML
Trigger: CAGCATGGTACCTTCAAGTCAAGGGAACCTATCTAT...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR TCA 90 bp AACATGTCATTTCTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCAAGAAGGAGCTTTCTTaGCGGCTCAATATAGATAGG +
Preference number: 4 (lower is better)
Translates to: NMSFLPLVTFLHSITWFTKKELS*RLNIDR
Trigger: CCTATCTATATTGAGCCGTCAAGAAAGCTCCTTCTT...GGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAGAAATGACATGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR TCA 90 bp GTAACAGTATCTGCTTCTGAGCTCAATAAAGGCTTTCATCTATTAAACGCAGAAAAGAAGGAGCTTTCTTaGCGGCTCAATATAGATAGG +
Preference number: 4 (lower is better)
Translates to: VTVSASELNKGFHLLNAEKKELS*RLNIDR
Trigger: CCTATCTATATTGAGCCGTCAAGAAAGCTCCTTCTT...TTCTGCGTTTAATAGATGAAAGCCTTTATTGAGCTCAGAAGCAGATACTGTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000645819.1
ENST00000649766.1
CDS-3UTR TCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTGTACAATGGTCAGAGTaGAGAAGGAGCTTTCTTGAC +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFVQWSE*RRSFLD
Trigger: GTCAAGAAAGCTCCTTCTTCACTCTGACCATTGTAC...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR TCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTCACATGAATATCTTCTaGACGATACTGGAGAACCCG +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFHMNIF*TILENP
Trigger: CGGGTTCTCCAGTATCGTTCAGAAGATATTCATGTG...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR TCA 90 bp ACCATAATACACTTTAGAAAACTTGTCTTCAGCACTACTAAAAACCCACTACACCACATGAATATCTTCTaGACGATACTGGAGAACCCG +
Preference number: 4 (lower is better)
Translates to: TIIHFRKLVFSTTKNPLHHMNIF*TILENP
Trigger: CGGGTTCTCCAGTATCGTTCAGAAGATATTCATGTG...GTGTAGTGGGTTTTTAGTAGTGCTGAAGACAAGTTTTCTAAAGTGTATTATGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR TCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAACACATGAATATCTTCTaGACGATACTGGAGAACCCG +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKHMNIF*TILENP
Trigger: CGGGTTCTCCAGTATCGTTCAGAAGATATTCATGTG...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR TCA 90 bp AATACAAAATCTTCAAATGGACATTGCCAGTCTACACACATAAGGCCCAGGATTGCTGGATGTTTCACATaGATATCTTCTGAACGATAC +
Preference number: 4 (lower is better)
Translates to: NTKSSNGHCQSTHIRPRIAGCFT*ISSERY
Trigger: GTATCGTTCAGAAGATATTCATGTGAAACATCCAGC...AATCCTGGGCCTTATGTGTGTAGACTGGCAATGTCCATTTGAAGATTTTGTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR TCA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGCAGGGTAACTATTCGTaGAAGGTTGAAACTGCTCAT +
Preference number: 4 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRQGNYS*KVETAH
Trigger: ATGAGCAGTTTCAACCTTTCACGAATAGTTACCCTG...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR TCA 90 bp GTAACAGTATCTGCTTCTGAGCTCAATAAAGGCTTTCATCTATTAAACGCAGAACAGGGTAACTATTCGTaGAAGGTTGAAACTGCTCAT +
Preference number: 4 (lower is better)
Translates to: VTVSASELNKGFHLLNAEQGNYS*KVETAH
Trigger: ATGAGCAGTTTCAACCTTTCACGAATAGTTACCCTG...TTCTGCGTTTAATAGATGAAAGCCTTTATTGAGCTCAGAAGCAGATACTGTTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000645819.1
ENST00000649766.1
CDS-3UTR TCA 90 bp AACATGTCATTTCTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCCACACAAAGTTTGCCTaGCAAACTTTCTGGCCAAAA +
Preference number: 4 (lower is better)
Translates to: NMSFLPLVTFLHSITWFTHTKFA*QTFWPK
Trigger: TTTTGGCCAGAAAGTTTGTCAGGCAAACTTTGTGTG...GGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAGAAATGACATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR TCA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGCACACAAAGTTTGCCTaGCAAACTTTCTGGCCAAAA +
Preference number: 4 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRHTKFA*QTFWPK
Trigger: TTTTGGCCAGAAAGTTTGTCAGGCAAACTTTGTGTG...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR TCA 90 bp GATACCCCAAAGATTTTCCATTTCCTTAGACGTATCTTTGGATCCATCTTCTTTCACACAAAGTTTGCCTaGCAAACTTTCTGGCCAAAA +
Preference number: 4 (lower is better)
Translates to: DTPKIFHFLRRIFGSIFFHTKFA*QTFWPK
Trigger: TTTTGGCCAGAAAGTTTGTCAGGCAAACTTTGTGTG...AAAGAAGATGGATCCAAAGATACGTCTAAGGAAATGGAAAATCTTTGGGGTATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR TCA 90 bp GAACCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCAATCAGAAAAAGTTATaGCAGTTGAATGTTCGGCAG +
Preference number: 4 (lower is better)
Translates to: EPLSHINKNRANQACPHLNQKKL*QLNVRQ
Trigger: CTGCCGAACATTCAACTGTCATAACTTTTTCTGATT...GAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGGTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAACACTCTGTTTGTATGTaGGGATGTCCCATGGTGTAT +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKHSVCM*GCPMVY
Trigger: ATACACCATGGGACATCCTCACATACAAACAGAGTG...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR TCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTCACTCTGTTTGTATGTaGGGATGTCCCATGGTGTAT +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFHSVCM*GCPMVY
Trigger: ATACACCATGGGACATCCTCACATACAAACAGAGTG...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR TCA 90 bp TATGCTTTTCAACAGCAAGTTGACAGAATGAACTGCAAACATTTCCTGTTTTTCCACTCTGTTTGTATGTaGGGATGTCCCATGGTGTAT +
Preference number: 4 (lower is better)
Translates to: YAFQQQVDRMNCKHFLFFHSVCM*GCPMVY
Trigger: ATACACCATGGGACATCCTCACATACAAACAGAGTG...GAAAAACAGGAAATGTTTGCAGTTCATTCTGTCAACTTGCTGTTGAAAAGCATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR TCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTGACCATTTCTTCTGGTaGCCCACTCTGTTTGTATGT +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFDHFFW*PTLFVC
Trigger: ACATACAAACAGAGTGGGTCACCAGAAGAAATGGTC...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR TCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAAGACCATTTCTTCTGGTaGCCCACTCTGTTTGTATGT +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKDHFFW*PTLFVC
Trigger: ACATACAAACAGAGTGGGTCACCAGAAGAAATGGTC...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR TCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTTTCATTGTTAACCAGTaGAAGCCCAAGACTGTGGAG +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFFIVNQ*KPKTVE
Trigger: CTCCACAGTCTTGGGCTTTCACTGGTTAACAATGAA...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR TCA 90 bp TATGCTTTTCAACAGCAAGTTGACAGAATGAACTGCAAACATTTCCTGTTTTTCTTCATTGTTAACCAGTaGAAGCCCAAGACTGTGGAG +
Preference number: 4 (lower is better)
Translates to: YAFQQQVDRMNCKHFLFFFIVNQ*KPKTVE
Trigger: CTCCACAGTCTTGGGCTTTCACTGGTTAACAATGAA...GAAAAACAGGAAATGTTTGCAGTTCATTCTGTCAACTTGCTGTTGAAAAGCATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR TCA 90 bp GAACCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCCTTAAACTTCTCTGGTaGGAAGACTGCTTAAATTCA +
Preference number: 4 (lower is better)
Translates to: EPLSHINKNRANQACPHLLKLLW*EDCLNS
Trigger: TGAATTTAAGCAGTCTTCTCACCAGAGAAGTTTAAG...GAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGGTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp AACATGTCATTTCTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCTGTCATAAGGACGAATaGTGCCATCTTCATGGATCA +
Preference number: 4 (lower is better)
Translates to: NMSFLPLVTFLHSITWFTCHKDE*CHLHGS
Trigger: TGATCCATGAAGATGGCATCATTCGTCCTTATGACA...GGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAGAAATGACATGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR TCA 90 bp CTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCAAGAATGTTAACATTCTGAGTTTGAAGTaGCGTTTCTTCAAGGGTCTG +
Preference number: 4 (lower is better)
Translates to: LPLVTFLHSITWFTKNVNILSLK*RFFKGL
Trigger: CAGACCCTTGAAGAAACGTCACTTCAAACTCAGAAT...GTTAACATTCTTGGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR TCA 90 bp CTTGACATCCACGACAAAAACTACCAAGTCCTCTCATTAGTGTATAATCATTCTCAACTATTTATTACTTaGGGTCTAAGGGCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: LDIHDKNYQVLSLVYNHSQLFIT*GLRAGS
Trigger: TGAGCCTGCCCTTAGACCTCAAGTAATAAATAGTTG...AGAATGATTATACACTAATGAGAGGACTTGGTAGTTTTTGTCGTGGATGTCAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000645819.1
ENST00000649766.1
CDS-3UTR TCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAAATCCATGCCCACACTTaGCATCCACGACAAAAACTA +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKIHAHT*HPRQKL
Trigger: TAGTTTTTGTCGTGGATGTCAAGTGTGGGCATGGAT...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000645819.1
ENST00000649766.1
CDS-3UTR TCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTATCCATGCCCACACTTaGCATCCACGACAAAAACTA +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFIHAHT*HPRQKL
Trigger: TAGTTTTTGTCGTGGATGTCAAGTGTGGGCATGGAT...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000645819.1
ENST00000649766.1
CDS-3UTR TCA 90 bp GTAACAGTATCTGCTTCTGAGCTCAATAAAGGCTTTCATCTATTAAACGCAGAATTTTACCCAACTAACTaGTCACAGCAAGATGGGCAA +
Preference number: 4 (lower is better)
Translates to: VTVSASELNKGFHLLNAEFYPTN*SQQDGQ
Trigger: TTGCCCATCTTGCTGTGATCAGTTAGTTGGGTAAAA...TTCTGCGTTTAATAGATGAAAGCCTTTATTGAGCTCAGAAGCAGATACTGTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000645819.1
ENST00000649766.1
CDS-3UTR GCA 90 bp GAACCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCCTGCTTCATTTAATATaGATGGAGTCCAGTGTTCAT +
Preference number: 4 (lower is better)
Translates to: EPLSHINKNRANQACPHLLLHLI*MESSVH
Trigger: ATGAACACTGGACTCCATGCATATTAAATGAAGCAG...GAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGGTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR GCA 90 bp GAACCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCAAGAACAGAATCAATTaGATATTTCCACCATCGTCG +
Preference number: 4 (lower is better)
Translates to: EPLSHINKNRANQACPHLKNRIN*IFPPSS
Trigger: CGACGATGGTGGAAATATGCAATTGATTCTGTTCTT...GAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGGTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR GCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAAGCTGAGATACTTGAGTaGCCAGGCCAATTATCTGAA +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKAEILE*PGQLSE
Trigger: TTCAGATAATTGGCCTGGGCACTCAAGTATCTCAGC...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR GCA 90 bp ACCATAATACACTTTAGAAAACTTGTCTTCAGCACTACTAAAAACCCACTACACGCTGAGATACTTGAGTaGCCAGGCCAATTATCTGAA +
Preference number: 4 (lower is better)
Translates to: TIIHFRKLVFSTTKNPLHAEILE*PGQLSE
Trigger: TTCAGATAATTGGCCTGGGCACTCAAGTATCTCAGC...GTGTAGTGGGTTTTTAGTAGTGCTGAAGACAAGTTTTCTAAAGTGTATTATGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR GCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAACGGGCAAAAAGTGACTaGTTTCTTGACTGGAGAGAA +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKRAKSD*FLDWRE
Trigger: TTCTCTCCAGTCAAGAAAGCAGTCACTTTTTGCCCG...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR GCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTTGTGGCAAGCTAGCCTaGAAAATAGTTCTTGACAGC +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFCGKLA*KIVLDS
Trigger: GCTGTCAAGAACTATTTTGCAGGCTAGCTTGCCACA...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR GCA 90 bp GAACCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCAATCATTCTCGATGTTaGTCTCTCAATTCCTTCTCT +
Preference number: 4 (lower is better)
Translates to: EPLSHINKNRANQACPHLNHSRC*SLNSFS
Trigger: AGAGAAGGAATTGAGAGAGCAACATCGAGAATGATT...GAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGGTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR GCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAATTGACAGAGAAAGGTTaGACTGAAACGAGGCTGTCA +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKLTEKG*TETRLS
Trigger: TGACAGCCTCGTTTCAGTGCAACCTTTCTCTGTCAA...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR GCA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGGGCCACAGGGATATTTaGAACTTCTGTATATCCATG +
Preference number: 4 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRGHRDI*NFCISM
Trigger: CATGGATATACAGAAGTTGCAAATATCCCTGTGGCC...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR GCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAATCTACTGATGGACACTaGAACATGCATCTGACTTCC +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKSTDGH*NMHLTS
Trigger: GGAAGTCAGATGCATGTTGCAGTGTCCATCAGTAGA...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR GCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTTCTACTGATGGACACTaGAACATGCATCTGACTTCC +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFSTDGH*NMHLTS
Trigger: GGAAGTCAGATGCATGTTGCAGTGTCCATCAGTAGA...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR GCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTGTCCATTCCAGTTTTTaGCCTGGTATTTCACCAGGA +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFVHSSF*PGISPG
Trigger: TCCTGGTGAAATACCAGGGCAAAAACTGGAATGGAC...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR GCA 90 bp AACATGTCATTTCTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCGTAGTGTATCACGTATaGGGAAATGTCCATTCCAGT +
Preference number: 4 (lower is better)
Translates to: NMSFLPLVTFLHSITWFTVVYHV*GNVHSS
Trigger: ACTGGAATGGACATTTCCGCATACGTGATACACTAC...GGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAGAAATGACATGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR GCA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGGTAGTGTATCACGTATaGGGAAATGTCCATTCCAGT +
Preference number: 4 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRVVYHV*GNVHSS
Trigger: ACTGGAATGGACATTTCCGCATACGTGATACACTAC...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR GCA 90 bp CTTGACATCCACGACAAAAACTACCAAGTCCTCTCATTAGTGTATAATCATTCTGTAGTGTATCACGTATaGGGAAATGTCCATTCCAGT +
Preference number: 4 (lower is better)
Translates to: LDIHDKNYQVLSLVYNHSVVYHV*GNVHSS
Trigger: ACTGGAATGGACATTTCCGCATACGTGATACACTAC...AGAATGATTATACACTAATGAGAGGACTTGGTAGTTTTTGTCGTGGATGTCAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000645819.1
ENST00000649766.1
CDS-3UTR GCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAACTCTCACACAAAGTTTaGCTGACAAACTTTCTGGCC +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKLSHKV*LTNFLA
Trigger: GGCCAGAAAGTTTGTCAGGCAAACTTTGTGTGAGAG...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR GCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTCTCTCACACAAAGTTTaGCTGACAAACTTTCTGGCC +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFLSHKV*LTNFLA
Trigger: GGCCAGAAAGTTTGTCAGGCAAACTTTGTGTGAGAG...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR GCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTCATTATCAAGGCAGGTaGAGATCCCTCATGGTAATC +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFHYQGR*RSLMVI
Trigger: GATTACCATGAGGGATCTGCACCTGCCTTGATAATG...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR GCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTTCCATTTCTTCTGCCTaGAGTGCTTTGGAAACCAAG +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFSISSA*SALETK
Trigger: CTTGGTTTCCAAAGCACTGCAGGCAGAAGAAATGGA...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR GCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTCTGTTCCATTTCTTCTaGCTGCAGTGCTTTGGAAAC +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFLFHFF*LQCFGN
Trigger: GTTTCCAAAGCACTGCAGGCAGAAGAAATGGAACAG...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR GCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAACTGTTCCATTTCTTCTaGCTGCAGTGCTTTGGAAAC +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKLFHFF*LQCFGN
Trigger: GTTTCCAAAGCACTGCAGGCAGAAGAAATGGAACAG...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR GCA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGCTTGTCCATTGTAATTaGTGCCAAACCTTTCCCAAC +
Preference number: 4 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRLVHCN*CQTFPN
Trigger: GTTGGGAAAGGTTTGGCAGCAATTACAATGGACAAG...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR GCA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGTGCCTTTTTCTGCTaGTTTTTGAAGGGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRCAFFC*FLKGFF
Trigger: GAAGAAGCCCTTCAAAAAGCAGCAGAAAAAGGCACA...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR GCA 90 bp CTTGACATCCACGACAAAAACTACCAAGTCCTCTCATTAGTGTATAATCATTCTATGTGTGCCTTTTTCTaGTGCTTTTTGAAGGGCTTC +
Preference number: 4 (lower is better)
Translates to: LDIHDKNYQVLSLVYNHSMCAFF*CFLKGF
Trigger: GAAGCCCTTCAAAAAGCAGCAGAAAAAGGCACACAT...AGAATGATTATACACTAATGAGAGGACTTGGTAGTTTTTGTCGTGGATGTCAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR CCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAAAGATCTGACTTTTCATaGTGGAAACCCGTCTGTGGA +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKRSDFS*WKPVCG
Trigger: TCCACAGACGGGTTTCCACCATGAAAAGTCAGATCT...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CCA 90 bp CTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCAAGAATGTTAACCAAATGTTCTCATTGTaGCCTCTGTTCCTAACTGAG +
Preference number: 4 (lower is better)
Translates to: LPLVTFLHSITWFTKNVNQMFSL*PLFLTE
Trigger: CTCAGTTAGGAACAGAGGCCACAATGAGAACATTTG...GTTAACATTCTTGGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CCA 90 bp GAACCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCGCTTTGATCATCAGATaGAATAATGGTTGTGAGGTA +
Preference number: 4 (lower is better)
Translates to: EPLSHINKNRANQACPHLALIIR*NNGCEV
Trigger: TACCTCACAACCATTATTCCATCTGATGATCAAAGC...GAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGGTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CCA 90 bp CTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCAAGAATGTTAACACACGAAAACTCCTCTaGGCAAGATCTTTCACACTT +
Preference number: 4 (lower is better)
Translates to: LPLVTFLHSITWFTKNVNTRKLL*ARSFTL
Trigger: AAGTGTGAAAGATCTTGCCCAGAGGAGTTTTCGTGT...GTTAACATTCTTGGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CCA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGACACGAAAACTCCTCTaGGCAAGATCTTTCACACTT +
Preference number: 4 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRTRKLL*ARSFTL
Trigger: AAGTGTGAAAGATCTTGCCCAGAGGAGTTTTCGTGT...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAAGGAAATAGAAGACTGTaGGATGACTATAACCGGTGC +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKGNRRL*DDYNRC
Trigger: GCACCGGTTATAGTCATCCCACAGTCTTCTATTTCC...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CCA 90 bp GAACCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCTGTCTCTTGTACTCTTaGTTTCACTTTATCCAAGTC +
Preference number: 4 (lower is better)
Translates to: EPLSHINKNRANQACPHLCLLYS*FHFIQV
Trigger: GACTTGGATAAAGTGAAACCAAGAGTACAAGAGACA...GAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGGTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CCA 90 bp GAACCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCTCAAACACATCCTTTTaGGAAATGTTGCTGGATACA +
Preference number: 4 (lower is better)
Translates to: EPLSHINKNRANQACPHLSNTSF*EMLLDT
Trigger: TGTATCCAGCAACATTTCCCAAAAGGATGTGTTTGA...GAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGGTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CCA 90 bp CCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCCATCAGCCTTTTTGTGAATaGACTGCAAATCTACATTCA +
Preference number: 4 (lower is better)
Translates to: PLSHINKNRANQACPHLHQPFCE*TANLHS
Trigger: TGAATGTAGATTTGCAGTCCATTCACAAAAAGGCTG...ATGGAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CCA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTCCTTCTGTGGCATCTaGATAAAGAGTCAGTTGGAA +
Preference number: 4 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRSFCGI*IKSQLE
Trigger: TTCCAACTGACTCTTTATCCAGATGCCACAGAAGGA...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CCA 90 bp GATACCCCAAAGATTTTCCATTTCCTTAGACGTATCTTTGGATCCATCTTCTTTTCCTTCTGTGGCATCTaGATAAAGAGTCAGTTGGAA +
Preference number: 4 (lower is better)
Translates to: DTPKIFHFLRRIFGSIFFSFCGI*IKSQLE
Trigger: TTCCAACTGACTCTTTATCCAGATGCCACAGAAGGA...AAAGAAGATGGATCCAAAGATACGTCTAAGGAAATGGAAAATCTTTGGGGTATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR CCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAAGTTTGCCGTCTACTTTaGACATATCAGCATAGGCCT +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKVCRLL*TYQHRP
Trigger: AGGCCTATGCTGATATGTCCAAAGTAGACGGCAAAC...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CCA 90 bp CCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCCATTCTTGTTCTTTGAGATaGTCAGGTACACTTGAAACA +
Preference number: 4 (lower is better)
Translates to: PLSHINKNRANQACPHLHSCSLR*SGTLET
Trigger: TGTTTCAAGTGTACCTGACCATCTCAAAGAACAAGA...ATGGAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CCA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGGAGACTGACAATCTaGTTCATAGAGAGCTTTGAG +
Preference number: 4 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRWRLTI*FIESFE
Trigger: CTCAAAGCTCTCTATGAACCAGATTGTCAGTCTCCA...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CCA 90 bp GTAACAGTATCTGCTTCTGAGCTCAATAAAGGCTTTCATCTATTAAACGCAGAATGGAGACTGACAATCTaGTTCATAGAGAGCTTTGAG +
Preference number: 4 (lower is better)
Translates to: VTVSASELNKGFHLLNAEWRLTI*FIESFE
Trigger: CTCAAAGCTCTCTATGAACCAGATTGTCAGTCTCCA...TTCTGCGTTTAATAGATGAAAGCCTTTATTGAGCTCAGAAGCAGATACTGTTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR CCA 90 bp CTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCAAGAATGTTAACTTGAAGGTACCATGCTaGCATACTCCAGTTCCAAAT +
Preference number: 4 (lower is better)
Translates to: LPLVTFLHSITWFTKNVNLKVPC*HTPVPN
Trigger: ATTTGGAACTGGAGTATGCCAGCATGGTACCTTCAA...GTTAACATTCTTGGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CCA 90 bp GTAACAGTATCTGCTTCTGAGCTCAATAAAGGCTTTCATCTATTAAACGCAGAATTGAAGGTACCATGCTaGCATACTCCAGTTCCAAAT +
Preference number: 4 (lower is better)
Translates to: VTVSASELNKGFHLLNAELKVPC*HTPVPN
Trigger: ATTTGGAACTGGAGTATGCCAGCATGGTACCTTCAA...TTCTGCGTTTAATAGATGAAAGCCTTTATTGAGCTCAGAAGCAGATACTGTTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR CCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAACAGAGTCAGAATGACTaGCATTGGGATTCCGTACAT +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKQSQND*HWDSVH
Trigger: ATGTACGGAATCCCAATGCCAGTCATTCTGACTCTG...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CCA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGGAATCTAAAGGAACATaGAACTCCTCTTCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRESKGT*NSSSGL
Trigger: CAGACCTGAAGAGGAGTTCCATGTTCCTTTAGATTC...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CCA 90 bp GAACCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCATCCCTGAAATCAGCTaGATGTTTCACATGAATATC +
Preference number: 4 (lower is better)
Translates to: EPLSHINKNRANQACPHLIPEIS*MFHMNI
Trigger: GATATTCATGTGAAACATCCAGCTGATTTCAGGGAT...GAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGGTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CCA 90 bp ACCATAATACACTTTAGAAAACTTGTCTTCAGCACTACTAAAAACCCACTACACCCAATGAGAAACTACTaGACCAGGCACTGGTTGAAA +
Preference number: 4 (lower is better)
Translates to: TIIHFRKLVFSTTKNPLHPMRNY*TRHWLK
Trigger: TTTCAACCAGTGCCTGGTCCAGTAGTTTCTCATTGG...GTGTAGTGGGTTTTTAGTAGTGCTGAAGACAAGTTTTCTAAAGTGTATTATGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR CCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAACCAATGAGAAACTACTaGACCAGGCACTGGTTGAAA +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKPMRNY*TRHWLK
Trigger: TTTCAACCAGTGCCTGGTCCAGTAGTTTCTCATTGG...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CCA 90 bp CTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCAAGAATGTTAACATGACTTGTTTGCAATaGTACAAAAGGGAGTCAGGG +
Preference number: 4 (lower is better)
Translates to: LPLVTFLHSITWFTKNVNMTCLQ*YKRESG
Trigger: CCCTGACTCCCTTTTGTACCATTGCAAACAAGTCAT...GTTAACATTCTTGGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CCA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGATGACTTGTTTGCAATaGTACAAAAGGGAGTCAGGG +
Preference number: 4 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRMTCLQ*YKRESG
Trigger: CCCTGACTCCCTTTTGTACCATTGCAAACAAGTCAT...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CCA 90 bp CCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCCATTATAAAAGAATGGTTTaGAAGATCCTTCACAGCCCA +
Preference number: 4 (lower is better)
Translates to: PLSHINKNRANQACPHLHYKRMV*KILHSP
Trigger: TGGGCTGTGAAGGATCTTCCAAACCATTCTTTTATA...ATGGAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CCA 90 bp ACTGTACTCATTAAATCTTGTGATGACACTCACATCAATGAAAGGCTTGGGCTCTATAAAAGAATGGTTTaGAAGATCCTTCACAGCCCA +
Preference number: 4 (lower is better)
Translates to: TVLIKSCDDTHINERLGLYKRMV*KILHSP
Trigger: TGGGCTGTGAAGGATCTTCCAAACCATTCTTTTATA...GAGCCCAAGCCTTTCATTGATGTGAGTGTCATCACAAGATTTAATGAGTACAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR CCA 90 bp GTAACAGTATCTGCTTCTGAGCTCAATAAAGGCTTTCATCTATTAAACGCAGAAATGTCCCATGGTGTATaGTTCATTATCAAGGCAGGT +
Preference number: 4 (lower is better)
Translates to: VTVSASELNKGFHLLNAEMSHGV*FIIKAG
Trigger: ACCTGCCTTGATAATGAACCATACACCATGGGACAT...TTCTGCGTTTAATAGATGAAAGCCTTTATTGAGCTCAGAAGCAGATACTGTTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CCA 90 bp CTTGACATCCACGACAAAAACTACCAAGTCCTCTCATTAGTGTATAATCATTCTATGTCCCATGGTGTATaGTTCATTATCAAGGCAGGT +
Preference number: 4 (lower is better)
Translates to: LDIHDKNYQVLSLVYNHSMSHGV*FIIKAG
Trigger: ACCTGCCTTGATAATGAACCATACACCATGGGACAT...AGAATGATTATACACTAATGAGAGGACTTGGTAGTTTTTGTCGTGGATGTCAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CCA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGAAAAGCAAAACTCTCTaGCGCCCATCCAGAAATGAT +
Preference number: 4 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRKSKTL*RPSRND
Trigger: ATCATTTCTGGATGGGCGCCAGAGAGTTTTGCTTTT...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CCA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGGAAAGCCCAAGACTGTaGAGAGACAAGGTTATTTCA +
Preference number: 4 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRESPRL*RDKVIS
Trigger: TGAAATAACCTTGTCTCTCCACAGTCTTGGGCTTTC...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CCA 90 bp GTAACAGTATCTGCTTCTGAGCTCAATAAAGGCTTTCATCTATTAAACGCAGAAGAAAGCCCAAGACTGTaGAGAGACAAGGTTATTTCA +
Preference number: 4 (lower is better)
Translates to: VTVSASELNKGFHLLNAEESPRL*RDKVIS
Trigger: TGAAATAACCTTGTCTCTCCACAGTCTTGGGCTTTC...TTCTGCGTTTAATAGATGAAAGCCTTTATTGAGCTCAGAAGCAGATACTGTTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CCA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGCTTCCATTTCTGCTTTaGTTTCACCTCCCAAACAAC +
Preference number: 4 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRLPFLL*FHLPNN
Trigger: GTTGTTTGGGAGGTGAAACCAAAGCAGAAATGGAAG...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CCA 90 bp GAACCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCGAGGCGCATTTCCATTaGATCTTTATCAAAATTGAC +
Preference number: 4 (lower is better)
Translates to: EPLSHINKNRANQACPHLEAHFH*IFIKID
Trigger: GTCAATTTTGATAAAGATCCAATGGAAATGCGCCTC...GAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGGTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTTGTCTCCAAAATCTCTaGGCTGTCGACTCAACTCTT +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFCLQNL*AVDSTL
Trigger: AAGAGTTGAGTCGACAGCCCAGAGATTTTGGAGACA...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CCA 90 bp ACCATAATACACTTTAGAAAACTTGTCTTCAGCACTACTAAAAACCCACTACACTGTCTCCAAAATCTCTaGGCTGTCGACTCAACTCTT +
Preference number: 4 (lower is better)
Translates to: TIIHFRKLVFSTTKNPLHCLQNL*AVDSTL
Trigger: AAGAGTTGAGTCGACAGCCCAGAGATTTTGGAGACA...GTGTAGTGGGTTTTTAGTAGTGCTGAAGACAAGTTTTCTAAAGTGTATTATGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR CCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAACTTGGAAGGTACTACTaGCCATATCTACGATTCCAC +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKLGRYY*PYLRFH
Trigger: GTGGAATCGTAGATATGGCCAGTAGTACCTTCCAAG...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CCA 90 bp ACCATAATACACTTTAGAAAACTTGTCTTCAGCACTACTAAAAACCCACTACACCTTGGAAGGTACTACTaGCCATATCTACGATTCCAC +
Preference number: 4 (lower is better)
Translates to: TIIHFRKLVFSTTKNPLHLGRYY*PYLRFH
Trigger: GTGGAATCGTAGATATGGCCAGTAGTACCTTCCAAG...GTGTAGTGGGTTTTTAGTAGTGCTGAAGACAAGTTTTCTAAAGTGTATTATGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR CCA 90 bp CTTGACATCCACGACAAAAACTACCAAGTCCTCTCATTAGTGTATAATCATTCTGCACACGCTGGTTTTTaGATGTCAGTCTTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: LDIHDKNYQVLSLVYNHSAHAGF*MSVFLL
Trigger: AAGAAGAAAGACTGACATCCAAAAACCAGCGTGTGC...AGAATGATTATACACTAATGAGAGGACTTGGTAGTTTTTGTCGTGGATGTCAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000645819.1
ENST00000649766.1
CDS-3UTR TCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTTTTTCTGCTGCTTTTTaGAGGGCTTCTTCAATTCGG +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFFSAAF*RASSIR
Trigger: CCGAATTGAAGAAGCCCTTCAAAAAGCAGCAGAAAA...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
38% GC, longest homopolymer 8 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR TCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTCAAAATCTGTTCCCTTaGTCTCTGGTAAGACATGCT +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFQNLFP*SLVRHA
Trigger: AGCATGTCTTACCAGAGATCAAGGGAACAGATTTTG...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR TCA 90 bp ACCATAATACACTTTAGAAAACTTGTCTTCAGCACTACTAAAAACCCACTACACGAGTTTTGCAGAGGCTaGTATTGGCTGGAAAATGTA +
Preference number: 4 (lower is better)
Translates to: TIIHFRKLVFSTTKNPLHEFCRG*YWLENV
Trigger: TACATTTTCCAGCCAATATCAGCCTCTGCAAAACTC...GTGTAGTGGGTTTTTAGTAGTGCTGAAGACAAGTTTTCTAAAGTGTATTATGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR TCA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGATAGTTGATGGATGCTaGAATCGACACTTTTTCCAG +
Preference number: 4 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRIVDGC*NRHFFQ
Trigger: CTGGAAAAAGTGTCGATTTCAGCATCCATCAACTAT...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR TCA 90 bp AACATGTCATTTCTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCATAGTTGATGGATGCTaGAATCGACACTTTTTCCAG +
Preference number: 4 (lower is better)
Translates to: NMSFLPLVTFLHSITWFTIVDGC*NRHFFQ
Trigger: CTGGAAAAAGTGTCGATTTCAGCATCCATCAACTAT...GGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAGAAATGACATGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTTAGCCAACTCAACATaGATATCCATGGGTTGCAAT +
Preference number: 4 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRLANST*ISMGCN
Trigger: ATTGCAACCCATGGATATTCATGTTGAGTTGGCTAA...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR TCA 90 bp GTAACAGTATCTGCTTCTGAGCTCAATAAAGGCTTTCATCTATTAAACGCAGAATTAGCCAACTCAACATaGATATCCATGGGTTGCAAT +
Preference number: 4 (lower is better)
Translates to: VTVSASELNKGFHLLNAELANST*ISMGCN
Trigger: ATTGCAACCCATGGATATTCATGTTGAGTTGGCTAA...TTCTGCGTTTAATAGATGAAAGCCTTTATTGAGCTCAGAAGCAGATACTGTTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR TCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTCCAGTCCTTGAATCTTaGTTTCGGCGATATTGTTCT +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFPVLES*FRRYCS
Trigger: AGAACAATATCGCCGAAATCAAGATTCAAGGACTGG...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR TCA 90 bp AACATGTCATTTCTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCGACACAGCTTTCTTATaGACTGTCTTTGGATCAACA +
Preference number: 4 (lower is better)
Translates to: NMSFLPLVTFLHSITWFTDTAFL*TVFGST
Trigger: TGTTGATCCAAAGACAGTTCATAAGAAAGCTGTGTC...GGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAGAAATGACATGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAAGAGACAGCCTTTTTGTaGATGGACTGCAAATCTACA +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKETAFL*MDCKST
Trigger: TGTAGATTTGCAGTCCATTCACAAAAAGGCTGTCTC...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR TCA 90 bp ACCATAATACACTTTAGAAAACTTGTCTTCAGCACTACTAAAAACCCACTACACCTTGACAGCTTCAACTaGGTGAGTTCGATGTTCATT +
Preference number: 4 (lower is better)
Translates to: TIIHFRKLVFSTTKNPLHLDSFN*VSSMFI
Trigger: AATGAACATCGAACTCACTCAGTTGAAGCTGTCAAG...GTGTAGTGGGTTTTTAGTAGTGCTGAAGACAAGTTTTCTAAAGTGTATTATGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR TCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAACTGCAAAATAGTTCTTaGCAGCTTCAACTGAGTGAG +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKLQNSS*QLQLSE
Trigger: CTCACTCAGTTGAAGCTGTCAAGAACTATTTTGCAG...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR TCA 90 bp CTTGACATCCACGACAAAAACTACCAAGTCCTCTCATTAGTGTATAATCATTCTATGGTCAGGTACACTTaGAACATCAACTTTTCTCAC +
Preference number: 4 (lower is better)
Translates to: LDIHDKNYQVLSLVYNHSMVRYT*NINFSH
Trigger: GTGAGAAAAGTTGATGTTTCAAGTGTACCTGACCAT...AGAATGATTATACACTAATGAGAGGACTTGGTAGTTTTTGTCGTGGATGTCAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR TCA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGAATCTTCTTGTTCTTTaGGATGGTCAGGTACACTTG +
Preference number: 4 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRNLLVL*DGQVHL
Trigger: CAAGTGTACCTGACCATCTCAAAGAACAAGAAGATT...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR TCA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGGAAACTGTCATTATaGAATGCAACTCCAGATTCC +
Preference number: 4 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRWKLSL*NATPDS
Trigger: GGAATCTGGAGTTGCATTTCATAATGACAGTTTCCA...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR TCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAAACATTTTCTGGACTCTaGGGCACAGCTTTGATAAAG +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKTFSGL*GTALIK
Trigger: CTTTATCAAAGCTGTGCCTCAGAGTCCAGAAAATGT...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR TCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAAAAGAAGGAGCTTTCTTaGCGGCTCAATATAGATAGG +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKKKELS*RLNIDR
Trigger: CCTATCTATATTGAGCCGTCAAGAAAGCTCCTTCTT...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR TCA 90 bp CTTGACATCCACGACAAAAACTACCAAGTCCTCTCATTAGTGTATAATCATTCTGTAGATTCTTTGTACTaGTGCTCTAAGATTCCAGCT +
Preference number: 4 (lower is better)
Translates to: LDIHDKNYQVLSLVYNHSVDSLY*CSKIPA
Trigger: AGCTGGAATCTTAGAGCATCAGTACAAAGAATCTAC...AGAATGATTATACACTAATGAGAGGACTTGGTAGTTTTTGTCGTGGATGTCAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000645819.1
ENST00000649766.1
CDS-3UTR TCA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGGTAGATTCTTTGTACTaGTGCTCTAAGATTCCAGCT +
Preference number: 4 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRVDSLY*CSKIPA
Trigger: AGCTGGAATCTTAGAGCATCAGTACAAAGAATCTAC...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR TCA 90 bp GATACCCCAAAGATTTTCCATTTCCTTAGACGTATCTTTGGATCCATCTTCTTTGTAGATTCTTTGTACTaGTGCTCTAAGATTCCAGCT +
Preference number: 4 (lower is better)
Translates to: DTPKIFHFLRRIFGSIFFVDSLY*CSKIPA
Trigger: AGCTGGAATCTTAGAGCATCAGTACAAAGAATCTAC...AAAGAAGATGGATCCAAAGATACGTCTAAGGAAATGGAAAATCTTTGGGGTATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR TCA 90 bp AACATGTCATTTCTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCGAAGATTCCGCAAAGTaGGAGAAGGATAAAGATGAA +
Preference number: 4 (lower is better)
Translates to: NMSFLPLVTFLHSITWFTEDSAK*EKDKDE
Trigger: TTCATCTTTATCCTTCTCTCACTTTGCGGAATCTTC...GGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAGAAATGACATGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR TCA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGCCATTATTTCACCACTaGTTCTCGAATGCAGAACAT +
Preference number: 4 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRPLFHH*FSNAEH
Trigger: ATGTTCTGCATTCGAGAATCAGTGGTGAAATAATGG...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR TCA 90 bp CTTGACATCCACGACAAAAACTACCAAGTCCTCTCATTAGTGTATAATCATTCTCCATTATTTCACCACTaGTTCTCGAATGCAGAACAT +
Preference number: 4 (lower is better)
Translates to: LDIHDKNYQVLSLVYNHSPLFHH*FSNAEH
Trigger: ATGTTCTGCATTCGAGAATCAGTGGTGAAATAATGG...AGAATGATTATACACTAATGAGAGGACTTGGTAGTTTTTGTCGTGGATGTCAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000645819.1
ENST00000649766.1
CDS-3UTR TCA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGGCTGGATGTTTCACATaGATATCTTCTGAACGATAC +
Preference number: 4 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRAGCFT*ISSERY
Trigger: GTATCGTTCAGAAGATATTCATGTGAAACATCCAGC...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR TCA 90 bp CTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCAAGAATGTTAACGCTGGATGTTTCACATaGATATCTTCTGAACGATAC +
Preference number: 4 (lower is better)
Translates to: LPLVTFLHSITWFTKNVNAGCFT*ISSERY
Trigger: GTATCGTTCAGAAGATATTCATGTGAAACATCCAGC...GTTAACATTCTTGGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR TCA 90 bp CTTGACATCCACGACAAAAACTACCAAGTCCTCTCATTAGTGTATAATCATTCTGCTGGATGTTTCACATaGATATCTTCTGAACGATAC +
Preference number: 4 (lower is better)
Translates to: LDIHDKNYQVLSLVYNHSAGCFT*ISSERY
Trigger: GTATCGTTCAGAAGATATTCATGTGAAACATCCAGC...AGAATGATTATACACTAATGAGAGGACTTGGTAGTTTTTGTCGTGGATGTCAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000645819.1
ENST00000649766.1
CDS-3UTR TCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAACAGGGTAACTATTCGTaGAAGGTTGAAACTGCTCAT +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKQGNYS*KVETAH
Trigger: ATGAGCAGTTTCAACCTTTCACGAATAGTTACCCTG...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR TCA 90 bp CTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCAAGAATGTTAACTTTATTAGTTGGCATTaGGCCATCAGATGCAATCTC +
Preference number: 4 (lower is better)
Translates to: LPLVTFLHSITWFTKNVNFISWH*AIRCNL
Trigger: GAGATTGCATCTGATGGCTCAATGCCAACTAATAAA...GTTAACATTCTTGGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR TCA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTTTATTAGTTGGCATTaGGCCATCAGATGCAATCTC +
Preference number: 4 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRFISWH*AIRCNL
Trigger: GAGATTGCATCTGATGGCTCAATGCCAACTAATAAA...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR TCA 90 bp AACATGTCATTTCTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCTTTATTAGTTGGCATTaGGCCATCAGATGCAATCTC +
Preference number: 4 (lower is better)
Translates to: NMSFLPLVTFLHSITWFTFISWH*AIRCNL
Trigger: GAGATTGCATCTGATGGCTCAATGCCAACTAATAAA...GGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAGAAATGACATGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR TCA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGAAATGGAAGGCACTCTaGAGAAGCAATATAGTTCCA +
Preference number: 4 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRKWKAL*RSNIVP
Trigger: TGGAACTATATTGCTTCTTCAGAGTGCCTTCCATTT...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR TCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAACACACAAAGTTTGCCTaGCAAACTTTCTGGCCAAAA +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKHTKFA*QTFWPK
Trigger: TTTTGGCCAGAAAGTTTGTCAGGCAAACTTTGTGTG...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR TCA 90 bp ACCATAATACACTTTAGAAAACTTGTCTTCAGCACTACTAAAAACCCACTACACCACACAAAGTTTGCCTaGCAAACTTTCTGGCCAAAA +
Preference number: 4 (lower is better)
Translates to: TIIHFRKLVFSTTKNPLHHTKFA*QTFWPK
Trigger: TTTTGGCCAGAAAGTTTGTCAGGCAAACTTTGTGTG...GTGTAGTGGGTTTTTAGTAGTGCTGAAGACAAGTTTTCTAAAGTGTATTATGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR TCA 90 bp AACATGTCATTTCTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCCCAGCCATGGTCTCTTaGTATTTGATGTTTCTGATA +
Preference number: 4 (lower is better)
Translates to: NMSFLPLVTFLHSITWFTPAMVS*YLMFLI
Trigger: TATCAGAAACATCAAATATCAAGAGACCATGGCTGG...GGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAGAAATGACATGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGGCTCCTAGAAACCCTTaGTCAATTTTTAAGGCCATT +
Preference number: 4 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRAPRNP*SIFKAI
Trigger: AATGGCCTTAAAAATTGATCAAGGGTTTCTAGGAGC...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR TCA 90 bp GTAACAGTATCTGCTTCTGAGCTCAATAAAGGCTTTCATCTATTAAACGCAGAAGCTCCTAGAAACCCTTaGTCAATTTTTAAGGCCATT +
Preference number: 4 (lower is better)
Translates to: VTVSASELNKGFHLLNAEAPRNP*SIFKAI
Trigger: AATGGCCTTAAAAATTGATCAAGGGTTTCTAGGAGC...TTCTGCGTTTAATAGATGAAAGCCTTTATTGAGCTCAGAAGCAGATACTGTTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000645819.1
ENST00000649766.1
CDS-3UTR TCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAATGTCATAAGGACGAATaGTGCCATCTTCATGGATCA +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKCHKDE*CHLHGS
Trigger: TGATCCATGAAGATGGCATCATTCGTCCTTATGACA...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR TCA 90 bp ACCATAATACACTTTAGAAAACTTGTCTTCAGCACTACTAAAAACCCACTACACTGTCATAAGGACGAATaGTGCCATCTTCATGGATCA +
Preference number: 4 (lower is better)
Translates to: TIIHFRKLVFSTTKNPLHCHKDE*CHLHGS
Trigger: TGATCCATGAAGATGGCATCATTCGTCCTTATGACA...GTGTAGTGGGTTTTTAGTAGTGCTGAAGACAAGTTTTCTAAAGTGTATTATGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR TCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTTGTCATAAGGACGAATaGTGCCATCTTCATGGATCA +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFCHKDE*CHLHGS
Trigger: TGATCCATGAAGATGGCATCATTCGTCCTTATGACA...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR TCA 90 bp AATACAAAATCTTCAAATGGACATTGCCAGTCTACACACATAAGGCCCAGGATTAATTGCAAAAAGCCATaGATAAGGAAGAGGAATCCA +
Preference number: 4 (lower is better)
Translates to: NTKSSNGHCQSTHIRPRINCKKP*IRKRNP
Trigger: TGGATTCCTCTTCCTTATTCATGGCTTTTTGCAATT...AATCCTGGGCCTTATGTGTGTAGACTGGCAATGTCCATTTGAAGATTTTGTATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR TCA 90 bp CTTGACATCCACGACAAAAACTACCAAGTCCTCTCATTAGTGTATAATCATTCTTACCTAGTCATTCCTTaGCAATTGCAAAAAGCCATG +
Preference number: 4 (lower is better)
Translates to: LDIHDKNYQVLSLVYNHSYLVIP*QLQKAM
Trigger: CATGGCTTTTTGCAATTGTCAAGGAATGACTAGGTA...AGAATGATTATACACTAATGAGAGGACTTGGTAGTTTTTGTCGTGGATGTCAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR TCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAAATATATGAACTCCCCTaGATGTGTGCCTTTTTCTGC +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKIYELP*MCAFFC
Trigger: GCAGAAAAAGGCACACATTCAGGGGAGTTCATATAT...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR TCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTTTTTACCCAACTAACTaGTCACAGCAAGATGGGCAA +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFFYPTN*SQQDGQ
Trigger: TTGCCCATCTTGCTGTGATCAGTTAGTTGGGTAAAA...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
38% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000645819.1
ENST00000649766.1
CDS-3UTR GCA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGATCATACTTAATACTTaGTCCAGGGACAACAAGCAG +
Preference number: 4 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRIILNT*SRDNKQ
Trigger: CTGCTTGTTGTCCCTGGAGCAAGTATTAAGTATGAT...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR GCA 90 bp AACATGTCATTTCTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCATCATACTTAATACTTaGTCCAGGGACAACAAGCAG +
Preference number: 4 (lower is better)
Translates to: NMSFLPLVTFLHSITWFTIILNT*SRDNKQ
Trigger: CTGCTTGTTGTCCCTGGAGCAAGTATTAAGTATGAT...GGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAGAAATGACATGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR GCA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTCTGGTAAGACATGCTaGAATTTACATTCCAGTAGG +
Preference number: 4 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRSGKTC*NLHSSR
Trigger: CCTACTGGAATGTAAATTGCAGCATGTCTTACCAGA...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR GCA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTCAGAAATTCTCACATaGATCAAAGGAAGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRSEILT*IKGSPP
Trigger: AGGAGGACTTCCTTTGATGCATGTGAGAATTTCTGA...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR GCA 90 bp GAACCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCGTAAGCTTTGTTAGCTaGACATCCATTCTATCAATT +
Preference number: 4 (lower is better)
Translates to: EPLSHINKNRANQACPHLVSFVS*TSILSI
Trigger: AATTGATAGAATGGATGTGCAGCTAACAAAGCTTAC...GAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGGTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR GCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTGCTTCCATTCCAAGTTaGAGGACATTTAGCTCATGT +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFASIPS*RTFSSC
Trigger: ACATGAGCTAAATGTCCTGCAACTTGGAATGGAAGC...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR GCA 90 bp AACATGTCATTTCTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCGCAAACACATCAGTCTaGTTAGGCTTCACAGAAATA +
Preference number: 4 (lower is better)
Translates to: NMSFLPLVTFLHSITWFTANTSV*LGFTEI
Trigger: TATTTCTGTGAAGCCTAAGCAGACTGATGTGTTTGC...GGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAGAAATGACATGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR GCA 90 bp CTTGACATCCACGACAAAAACTACCAAGTCCTCTCATTAGTGTATAATCATTCTGCAAACACATCAGTCTaGTTAGGCTTCACAGAAATA +
Preference number: 4 (lower is better)
Translates to: LDIHDKNYQVLSLVYNHSANTSV*LGFTEI
Trigger: TATTTCTGTGAAGCCTAAGCAGACTGATGTGTTTGC...AGAATGATTATACACTAATGAGAGGACTTGGTAGTTTTTGTCGTGGATGTCAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR GCA 90 bp AACATGTCATTTCTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCTGTTTTTGGAGACAATaGAGCCATGATTGTCAACAC +
Preference number: 4 (lower is better)
Translates to: NMSFLPLVTFLHSITWFTCFWRQ*SHDCQH
Trigger: GTGTTGACAATCATGGCTGCATTGTCTCCAAAAACA...GGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAGAAATGACATGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR GCA 90 bp CTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCAAGAATGTTAACTGTTTTTGGAGACAATaGAGCCATGATTGTCAACAC +
Preference number: 4 (lower is better)
Translates to: LPLVTFLHSITWFTKNVNCFWRQ*SHDCQH
Trigger: GTGTTGACAATCATGGCTGCATTGTCTCCAAAAACA...GTTAACATTCTTGGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR GCA 90 bp CTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCAAGAATGTTAACTTCCGTTATTTCTGTTaGCGTGTCAACACCAAGAAA +
Preference number: 4 (lower is better)
Translates to: LPLVTFLHSITWFTKNVNFRYFC*RVNTKK
Trigger: TTTCTTGGTGTTGACACGGCAACAGAAATAACGGAA...GTTAACATTCTTGGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR GCA 90 bp GATACCCCAAAGATTTTCCATTTCCTTAGACGTATCTTTGGATCCATCTTCTTTTTCCGTTATTTCTGTTaGCGTGTCAACACCAAGAAA +
Preference number: 4 (lower is better)
Translates to: DTPKIFHFLRRIFGSIFFFRYFC*RVNTKK
Trigger: TTTCTTGGTGTTGACACGGCAACAGAAATAACGGAA...AAAGAAGATGGATCCAAAGATACGTCTAAGGAAATGGAAAATCTTTGGGGTATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR GCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTGGCCACAGGGATATTTaGAACTTCTGTATATCCATG +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFGHRDI*NFCISM
Trigger: CATGGATATACAGAAGTTGCAAATATCCCTGTGGCC...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR GCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAAGGCCACAGGGATATTTaGAACTTCTGTATATCCATG +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKGHRDI*NFCISM
Trigger: CATGGATATACAGAAGTTGCAAATATCCCTGTGGCC...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR GCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTGTAGTGTATCACGTATaGGGAAATGTCCATTCCAGT +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFVVYHV*GNVHSS
Trigger: ACTGGAATGGACATTTCCGCATACGTGATACACTAC...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR GCA 90 bp TATGCTTTTCAACAGCAAGTTGACAGAATGAACTGCAAACATTTCCTGTTTTTCGTAGTGTATCACGTATaGGGAAATGTCCATTCCAGT +
Preference number: 4 (lower is better)
Translates to: YAFQQQVDRMNCKHFLFFVVYHV*GNVHSS
Trigger: ACTGGAATGGACATTTCCGCATACGTGATACACTAC...GAAAAACAGGAAATGTTTGCAGTTCATTCTGTCAACTTGCTGTTGAAAAGCATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR GCA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGGTGTATCTGGATGTTTaGATCATATGGAAACTGTCC +
Preference number: 4 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRVYLDV*IIWKLS
Trigger: GGACAGTTTCCATATGATGCAAACATCCAGATACAC...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR GCA 90 bp AACATGTCATTTCTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCGTGTATCTGGATGTTTaGATCATATGGAAACTGTCC +
Preference number: 4 (lower is better)
Translates to: NMSFLPLVTFLHSITWFTVYLDV*IIWKLS
Trigger: GGACAGTTTCCATATGATGCAAACATCCAGATACAC...GGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAGAAATGACATGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR GCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAACTTGTCCATTGTAATTaGTGCCAAACCTTTCCCAAC +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKLVHCN*CQTFPN
Trigger: GTTGGGAAAGGTTTGGCAGCAATTACAATGGACAAG...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR GCA 90 bp CTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCAAGAATGTTAACTTCATCAATTTTTGCTaGTGTCTCGTTGACTGTGCA +
Preference number: 4 (lower is better)
Translates to: LPLVTFLHSITWFTKNVNFINFC*CLVDCA
Trigger: TGCACAGTCAACGAGACAGCAGCAAAAATTGATGAA...GTTAACATTCTTGGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR GCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAATGTATTTCCAGTTCTTaGTCAAGTAAGTCAGAGCCC +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKCISSS*SSKSEP
Trigger: GGGCTCTGACTTACTTGAGCAAGAACTGGAAATACA...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR GCA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTTCCAGTTCTTGCTGTaGAGGCAGAAAAACAAAGAA +
Preference number: 4 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRFQFLL*RQKNKE
Trigger: TTCTTTGTTTTTCTGCCTGCACAGCAAGAACTGGAA...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000649766.1
CDS-3UTR GCA 90 bp ACTGTACTCATTAAATCTTGTGATGACACTCACATCAATGAAAGGCTTGGGCTCCCAATCTTCTTGTTCTaGATAGGTTTTAGTTTTCCT +
Preference number: 4 (lower is better)
Translates to: TVLIKSCDDTHINERLGLPIFLF*IGFSFP
Trigger: AGGAAAACTAAAACCTATGCAGAACAAGAAGATTGG...GAGCCCAAGCCTTTCATTGATGTGAGTGTCATCACAAGATTTAATGAGTACAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR CCA 90 bp CCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCCATTTAAGTACTGAGGTTTaGTCAGTTCAATGGCAATAT +
Preference number: 4 (lower is better)
Translates to: PLSHINKNRANQACPHLHLSTEV*SVQWQY
Trigger: ATATTGCCATTGAACTGACCAAACCTCAGTACTTAA...ATGGAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CCA 90 bp CTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCAAGAATGTTAACACCATCGTCGACCATTaGTATGAAGTGGTAAATAAG +
Preference number: 4 (lower is better)
Translates to: LPLVTFLHSITWFTKNVNTIVDH*YEVVNK
Trigger: CTTATTTACCACTTCATACCAATGGTCGACGATGGT...GTTAACATTCTTGGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CCA 90 bp CTTGACATCCACGACAAAAACTACCAAGTCCTCTCATTAGTGTATAATCATTCTTTCAGGGTCATAATATaGGCAACATACTGCTTAGGT +
Preference number: 4 (lower is better)
Translates to: LDIHDKNYQVLSLVYNHSFRVII*ATYCLG
Trigger: ACCTAAGCAGTATGTTGCCCATATTATGACCCTGAA...AGAATGATTATACACTAATGAGAGGACTTGGTAGTTTTTGTCGTGGATGTCAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR CCA 90 bp CTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCAAGAATGTTAACACTTTTACAAGTCTGTaGTTCTCCATCTTCAGCATC +
Preference number: 4 (lower is better)
Translates to: LPLVTFLHSITWFTKNVNTFTSL*FSIFSI
Trigger: GATGCTGAAGATGGAGAACCACAGACTTGTAAAAGT...GTTAACATTCTTGGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAACAAATGTTCTCATTGTaGCCTCTGTTCCTAACTGAG +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKQMFSL*PLFLTE
Trigger: CTCAGTTAGGAACAGAGGCCACAATGAGAACATTTG...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTCAAATGTTCTCATTGTaGCCTCTGTTCCTAACTGAG +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFQMFSL*PLFLTE
Trigger: CTCAGTTAGGAACAGAGGCCACAATGAGAACATTTG...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CCA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGGAAGGGGCTTCCTTTTaGATCCTTCAATTTCATGAT +
Preference number: 4 (lower is better)
Translates to: PQVFICSQSHYYEKFRWREGASF*ILQFHD
Trigger: ATCATGAAATTGAAGGATCCAAAAGGAAGCCCCTTC...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CCA 90 bp AACATGTCATTTCTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCGAAGGGGCTTCCTTTTaGATCCTTCAATTTCATGAT +
Preference number: 4 (lower is better)
Translates to: NMSFLPLVTFLHSITWFTEGASF*ILQFHD
Trigger: ATCATGAAATTGAAGGATCCAAAAGGAAGCCCCTTC...GGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAGAAATGACATGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CCA 90 bp CCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCCATCTTATGAACTGTCTTTaGATCAACATCTGTGACAAT +
Preference number: 4 (lower is better)
Translates to: PLSHINKNRANQACPHLHLMNCL*INICDN
Trigger: ATTGTCACAGATGTTGATCCAAAGACAGTTCATAAG...ATGGAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CCA 90 bp AACATGTCATTTCTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCGCACACCATCCACTTTaGACATGTCAGTATACAAAT +
Preference number: 4 (lower is better)
Translates to: NMSFLPLVTFLHSITWFTAHHPL*TCQYTN
Trigger: ATTTGTATACTGACATGTCCAAAGTGGATGGTGTGC...GGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAGAAATGACATGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CCA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGGCACACCATCCACTTTaGACATGTCAGTATACAAAT +
Preference number: 4 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRAHHPL*TCQYTN
Trigger: ATTTGTATACTGACATGTCCAAAGTGGATGGTGTGC...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CCA 90 bp CTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCAAGAATGTTAACGCACACCATCCACTTTaGACATGTCAGTATACAAAT +
Preference number: 4 (lower is better)
Translates to: LPLVTFLHSITWFTKNVNAHHPL*TCQYTN
Trigger: ATTTGTATACTGACATGTCCAAAGTGGATGGTGTGC...GTTAACATTCTTGGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CCA 90 bp CTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCAAGAATGTTAACGACTCTTTGGCTGTCTaGAAATTATTCAGGAAGTTC +
Preference number: 4 (lower is better)
Translates to: LPLVTFLHSITWFTKNVNDSLAV*KLFRKF
Trigger: GAACTTCCTGAATAATTTCCAGACAGCCAAAGAGTC...GTTAACATTCTTGGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAAACACGAAAACTCCTCTaGGCAAGATCTTTCACACTT +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKTRKLL*ARSFTL
Trigger: AAGTGTGAAAGATCTTGCCCAGAGGAGTTTTCGTGT...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CCA 90 bp CCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCCATAAATTCCAAGTTAATTaGGTGCAACAGCTGAATATC +
Preference number: 4 (lower is better)
Translates to: PLSHINKNRANQACPHLHKFQVN*VQQLNI
Trigger: GATATTCAGCTGTTGCACCCAATTAACTTGGAATTT...ATGGAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CCA 90 bp ACTGTACTCATTAAATCTTGTGATGACACTCACATCAATGAAAGGCTTGGGCTCAATAGTTTTAAATTCTaGTCCATCACTGTCTGCCTT +
Preference number: 4 (lower is better)
Translates to: TVLIKSCDDTHINERLGLNSFKF*SITVCL
Trigger: AAGGCAGACAGTGATGGACCAGAATTTAAAACTATT...GAGCCCAAGCCTTTCATTGATGTGAGTGTCATCACAAGATTTAATGAGTACAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR CCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTTCCTTCTGTGGCATCTaGATAAAGAGTCAGTTGGAA +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFSFCGI*IKSQLE
Trigger: TTCCAACTGACTCTTTATCCAGATGCCACAGAAGGA...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CCA 90 bp GAACCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCGAACTGTTGTTATCTTaGTCATTCTTTCTGTCAATC +
Preference number: 4 (lower is better)
Translates to: EPLSHINKNRANQACPHLELLLS*SFFLSI
Trigger: GATTGACAGAAAGAATGACCAAGATAACAACAGTTC...GAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGGTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CCA 90 bp GATACCCCAAAGATTTTCCATTTCCTTAGACGTATCTTTGGATCCATCTTCTTTTCAGAAATTCCACACTaGCACATACATACAGCTTGT +
Preference number: 4 (lower is better)
Translates to: DTPKIFHFLRRIFGSIFFSEIPH*HIHTAC
Trigger: ACAAGCTGTATGTATGTGCCAGTGTGGAATTTCTGA...AAAGAAGATGGATCCAAAGATACGTCTAAGGAAATGGAAAATCTTTGGGGTATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR CCA 90 bp AACATGTCATTTCTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCAACAAATACCACTTCTaGATCTGTGATCATGGCCTT +
Preference number: 4 (lower is better)
Translates to: NMSFLPLVTFLHSITWFTNKYHF*ICDHGL
Trigger: AAGGCCATGATCACAGATCCAGAAGTGGTATTTGTT...GGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAGAAATGACATGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CCA 90 bp GTAACAGTATCTGCTTCTGAGCTCAATAAAGGCTTTCATCTATTAAACGCAGAAAACAAATACCACTTCTaGATCTGTGATCATGGCCTT +
Preference number: 4 (lower is better)
Translates to: VTVSASELNKGFHLLNAENKYHF*ICDHGL
Trigger: AAGGCCATGATCACAGATCCAGAAGTGGTATTTGTT...TTCTGCGTTTAATAGATGAAAGCCTTTATTGAGCTCAGAAGCAGATACTGTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR CCA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTCATCTGTTCGAGTTTaGATGTTGACAGAGAAAGGT +
Preference number: 4 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRSSVRV*MLTEKG
Trigger: ACCTTTCTCTGTCAACATCCAAACTCGAACAGATGA...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CCA 90 bp TCGTTTAATAGGGCTACGAATAGGGAGGCGCATTTCCATTGGATCTTTATCAAAATCTTCTTTTGTTTTTaGAGACAATGCAGCCATGAT +
Preference number: 4 (lower is better)
Translates to: SFNRATNREAHFHWIFIKIFFCF*RQCSHD
Trigger: ATCATGGCTGCATTGTCTCCAAAAACAAAAGAAGAT...TTTGATAAAGATCCAATGGAAATGCGCCTCCCTATTCGTAGCCCTATTAAACGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR CCA 90 bp GAACCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCAATAAAATCATCTCCTaGCAGCAAACTTTTATCCTG +
Preference number: 4 (lower is better)
Translates to: EPLSHINKNRANQACPHLNKIIS*QQTFIL
Trigger: CAGGATAAAAGTTTGCTGCCAGGAGATGATTTTATT...GAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGGTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CCA 90 bp GAACCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCATGAATTGCCATTTGTaGCTCAGGAATAAAATCATC +
Preference number: 4 (lower is better)
Translates to: EPLSHINKNRANQACPHLMNCHL*LRNKII
Trigger: GATGATTTTATTCCTGAGCCACAAATGGCAATTCAT...GAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGGTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CCA 90 bp CTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCAAGAATGTTAACTCCAGTTCCAAATTCTaGCCAGCATCAACATCAAAA +
Preference number: 4 (lower is better)
Translates to: LPLVTFLHSITWFTKNVNSSSKF*PASTSK
Trigger: TTTTGATGTTGATGCTGGCCAGAATTTGGAACTGGA...GTTAACATTCTTGGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CCA 90 bp AACATGTCATTTCTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCTCCAGTTCCAAATTCTaGCCAGCATCAACATCAAAA +
Preference number: 4 (lower is better)
Translates to: NMSFLPLVTFLHSITWFTSSSKF*PASTSK
Trigger: TTTTGATGTTGATGCTGGCCAGAATTTGGAACTGGA...GGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAGAAATGACATGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CCA 90 bp GTAACAGTATCTGCTTCTGAGCTCAATAAAGGCTTTCATCTATTAAACGCAGAATCCAGTTCCAAATTCTaGCCAGCATCAACATCAAAA +
Preference number: 4 (lower is better)
Translates to: VTVSASELNKGFHLLNAESSSKF*PASTSK
Trigger: TTTTGATGTTGATGCTGGCCAGAATTTGGAACTGGA...TTCTGCGTTTAATAGATGAAAGCCTTTATTGAGCTCAGAAGCAGATACTGTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR CCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAATTGAAGGTACCATGCTaGCATACTCCAGTTCCAAAT +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKLKVPC*HTPVPN
Trigger: ATTTGGAACTGGAGTATGCCAGCATGGTACCTTCAA...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CCA 90 bp AACATGTCATTTCTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCCAGAATGACTGGCATTaGGATTCCGTACATTATACA +
Preference number: 4 (lower is better)
Translates to: NMSFLPLVTFLHSITWFTQNDWH*DSVHYT
Trigger: TGTATAATGTACGGAATCCCAATGCCAGTCATTCTG...GGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAGAAATGACATGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CCA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGCAGAATGACTGGCATTaGGATTCCGTACATTATACA +
Preference number: 4 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRQNDWH*DSVHYT
Trigger: TGTATAATGTACGGAATCCCAATGCCAGTCATTCTG...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CCA 90 bp GTAACAGTATCTGCTTCTGAGCTCAATAAAGGCTTTCATCTATTAAACGCAGAACAGAATGACTGGCATTaGGATTCCGTACATTATACA +
Preference number: 4 (lower is better)
Translates to: VTVSASELNKGFHLLNAEQNDWH*DSVHYT
Trigger: TGTATAATGTACGGAATCCCAATGCCAGTCATTCTG...TTCTGCGTTTAATAGATGAAAGCCTTTATTGAGCTCAGAAGCAGATACTGTTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTGAATCTAAAGGAACATaGAACTCCTCTTCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFESKGT*NSSSGL
Trigger: CAGACCTGAAGAGGAGTTCCATGTTCCTTTAGATTC...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CCA 90 bp ACCATAATACACTTTAGAAAACTTGTCTTCAGCACTACTAAAAACCCACTACACGAATCTAAAGGAACATaGAACTCCTCTTCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: TIIHFRKLVFSTTKNPLHESKGT*NSSSGL
Trigger: CAGACCTGAAGAGGAGTTCCATGTTCCTTTAGATTC...GTGTAGTGGGTTTTTAGTAGTGCTGAAGACAAGTTTTCTAAAGTGTATTATGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR CCA 90 bp ACTGTACTCATTAAATCTTGTGATGACACTCACATCAATGAAAGGCTTGGGCTCTACTGGACCAGGCACTaGTTGAAATTTTTAATTGTA +
Preference number: 4 (lower is better)
Translates to: TVLIKSCDDTHINERLGLYWTRH*LKFLIV
Trigger: TACAATTAAAAATTTCAACCAGTGCCTGGTCCAGTA...GAGCCCAAGCCTTTCATTGATGTGAGTGTCATCACAAGATTTAATGAGTACAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR CCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTATGACTTGTTTGCAATaGTACAAAAGGGAGTCAGGG +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFMTCLQ*YKRESG
Trigger: CCCTGACTCCCTTTTGTACCATTGCAAACAAGTCAT...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAAATGACTTGTTTGCAATaGTACAAAAGGGAGTCAGGG +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKMTCLQ*YKRESG
Trigger: CCCTGACTCCCTTTTGTACCATTGCAAACAAGTCAT...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CCA 90 bp GAACCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCTCGGTTATAAAAGAATaGTTTGGAAGATCCTTCACA +
Preference number: 4 (lower is better)
Translates to: EPLSHINKNRANQACPHLSVIKE*FGRSFT
Trigger: TGTGAAGGATCTTCCAAACCATTCTTTTATAACCGA...GAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGGTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CCA 90 bp TCGTTTAATAGGGCTACGAATAGGGAGGCGCATTTCCATTGGATCTTTATCAAATCGGTTATAAAAGAATaGTTTGGAAGATCCTTCACA +
Preference number: 4 (lower is better)
Translates to: SFNRATNREAHFHWIFIKSVIKE*FGRSFT
Trigger: TGTGAAGGATCTTCCAAACCATTCTTTTATAACCGA...TTTGATAAAGATCCAATGGAAATGCGCCTCCCTATTCGTAGCCCTATTAAACGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR CCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTATGTCCCATGGTGTATaGTTCATTATCAAGGCAGGT +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFMSHGV*FIIKAG
Trigger: ACCTGCCTTGATAATGAACCATACACCATGGGACAT...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CCA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGTGAGGATGTCCCATaGTGTATGGTTCATTATCAA +
Preference number: 4 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRCEDVP*CMVHYQ
Trigger: TTGATAATGAACCATACACCATGGGACATCCTCACA...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CCA 90 bp CTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCAAGAATGTTAACTGTGAGGATGTCCCATaGTGTATGGTTCATTATCAA +
Preference number: 4 (lower is better)
Translates to: LPLVTFLHSITWFTKNVNCEDVP*CMVHYQ
Trigger: TTGATAATGAACCATACACCATGGGACATCCTCACA...GTTAACATTCTTGGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CCA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGGATACCCAGTGTATCTaGATGTTTGCATCATATGGA +
Preference number: 4 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRDTQCI*MFASYG
Trigger: TCCATATGATGCAAACATCCAGATACACTGGGTATC...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CCA 90 bp GTAACAGTATCTGCTTCTGAGCTCAATAAAGGCTTTCATCTATTAAACGCAGAAGATACCCAGTGTATCTaGATGTTTGCATCATATGGA +
Preference number: 4 (lower is better)
Translates to: VTVSASELNKGFHLLNAEDTQCI*MFASYG
Trigger: TCCATATGATGCAAACATCCAGATACACTGGGTATC...TTCTGCGTTTAATAGATGAAAGCCTTTATTGAGCTCAGAAGCAGATACTGTTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CCA 90 bp ACCATAATACACTTTAGAAAACTTGTCTTCAGCACTACTAAAAACCCACTACACAAAAGCAAAACTCTCTaGCGCCCATCCAGAAATGAT +
Preference number: 4 (lower is better)
Translates to: TIIHFRKLVFSTTKNPLHKSKTL*RPSRND
Trigger: ATCATTTCTGGATGGGCGCCAGAGAGTTTTGCTTTT...GTGTAGTGGGTTTTTAGTAGTGCTGAAGACAAGTTTTCTAAAGTGTATTATGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR CCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAAAGCAAAACTCTCTaGCGCCCATCCAGAAATGAT +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFKSKTL*RPSRND
Trigger: ATCATTTCTGGATGGGCGCCAGAGAGTTTTGCTTTT...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAAGAAAGCCCAAGACTGTaGAGAGACAAGGTTATTTCA +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKESPRL*RDKVIS
Trigger: TGAAATAACCTTGTCTCTCCACAGTCTTGGGCTTTC...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CCA 90 bp AACATGTCATTTCTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCTTCAGGGTCTGTTGTTaGGGTAAACAGTGCAATAAT +
Preference number: 4 (lower is better)
Translates to: NMSFLPLVTFLHSITWFTFRVCC*GKQCNN
Trigger: ATTATTGCACTGTTTACCCCAACAACAGACCCTGAA...GGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAGAAATGACATGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CCA 90 bp CTTGACATCCACGACAAAAACTACCAAGTCCTCTCATTAGTGTATAATCATTCTATATCTAGCACACGCTaGTTTTTGGATGTCAGTCTT +
Preference number: 4 (lower is better)
Translates to: LDIHDKNYQVLSLVYNHSISSTR*FLDVSL
Trigger: AAGACTGACATCCAAAAACCAGCGTGTGCTAGATAT...AGAATGATTATACACTAATGAGAGGACTTGGTAGTTTTTGTCGTGGATGTCAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000645819.1
ENST00000649766.1
CDS-3UTR TCA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGAACCATATAATCCACTaGCTCCAAAAGGTCAATCAT +
Preference number: 4 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRNHIIH*LQKVNH
Trigger: ATGATTGACCTTTTGGAGTCAGTGGATTATATGGTT...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR TCA 90 bp CTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCAAGAATGTTAACCTTCATCAATGTTGCTaGTGTTATTTGCTCAAGATC +
Preference number: 4 (lower is better)
Translates to: LPLVTFLHSITWFTKNVNLHQCC*CYLLKI
Trigger: GATCTTGAGCAAATAACATCAGCAACATTGATGAAG...GTTAACATTCTTGGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR TCA 90 bp GTAACAGTATCTGCTTCTGAGCTCAATAAAGGCTTTCATCTATTAAACGCAGAACTTCATCAATGTTGCTaGTGTTATTTGCTCAAGATC +
Preference number: 4 (lower is better)
Translates to: VTVSASELNKGFHLLNAELHQCC*CYLLKI
Trigger: GATCTTGAGCAAATAACATCAGCAACATTGATGAAG...TTCTGCGTTTAATAGATGAAAGCCTTTATTGAGCTCAGAAGCAGATACTGTTAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR TCA 90 bp ACCATAATACACTTTAGAAAACTTGTCTTCAGCACTACTAAAAACCCACTACACATAGTTGATGGATGCTaGAATCGACACTTTTTCCAG +
Preference number: 4 (lower is better)
Translates to: TIIHFRKLVFSTTKNPLHIVDGC*NRHFFQ
Trigger: CTGGAAAAAGTGTCGATTTCAGCATCCATCAACTAT...GTGTAGTGGGTTTTTAGTAGTGCTGAAGACAAGTTTTCTAAAGTGTATTATGGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR TCA 90 bp GTAACAGTATCTGCTTCTGAGCTCAATAAAGGCTTTCATCTATTAAACGCAGAACAATATATGCATAGTTaGTGGATGCTGAAATCGACA +
Preference number: 4 (lower is better)
Translates to: VTVSASELNKGFHLLNAEQYMHS*WMLKST
Trigger: TGTCGATTTCAGCATCCATCAACTATGCATATATTG...TTCTGCGTTTAATAGATGAAAGCCTTTATTGAGCTCAGAAGCAGATACTGTTAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR TCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAAGACACAGCTTTCTTATaGACTGTCTTTGGATCAACA +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKDTAFL*TVFGST
Trigger: TGTTGATCCAAAGACAGTTCATAAGAAAGCTGTGTC...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR TCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTGACACAGCTTTCTTATaGACTGTCTTTGGATCAACA +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFDTAFL*TVFGST
Trigger: TGTTGATCCAAAGACAGTTCATAAGAAAGCTGTGTC...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR TCA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGCAGGAAGTTCAGAAGTaGCATAAGGAATTTATGAAG +
Preference number: 4 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRQEVQK*HKEFMK
Trigger: CTTCATAAATTCCTTATGTCACTTCTGAACTTCCTG...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR TCA 90 bp GTAACAGTATCTGCTTCTGAGCTCAATAAAGGCTTTCATCTATTAAACGCAGAACAGGAAGTTCAGAAGTaGCATAAGGAATTTATGAAG +
Preference number: 4 (lower is better)
Translates to: VTVSASELNKGFHLLNAEQEVQK*HKEFMK
Trigger: CTTCATAAATTCCTTATGTCACTTCTGAACTTCCTG...TTCTGCGTTTAATAGATGAAAGCCTTTATTGAGCTCAGAAGCAGATACTGTTAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR TCA 90 bp CTTGACATCCACGACAAAAACTACCAAGTCCTCTCATTAGTGTATAATCATTCTATCATGTACATCTTGTaGTATAGAGATTTCAAGGGG +
Preference number: 4 (lower is better)
Translates to: LDIHDKNYQVLSLVYNHSIMYIL*YRDFKG
Trigger: CCCCTTGAAATCTCTATATCACAAGATGTACATGAT...AGAATGATTATACACTAATGAGAGGACTTGGTAGTTTTTGTCGTGGATGTCAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR TCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAAGAAGAGTTAATAATGTaGAGAGGTTCCCCTTTAGAG +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKEELIM*RGSPLE
Trigger: CTCTAAAGGGGAACCTCTTCACATTATTAACTCTTC...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR TCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTGAAGAGTTAATAATGTaGAGAGGTTCCCCTTTAGAG +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFEELIM*RGSPLE
Trigger: CTCTAAAGGGGAACCTCTTCACATTATTAACTCTTC...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR TCA 90 bp CTTGACATCCACGACAAAAACTACCAAGTCCTCTCATTAGTGTATAATCATTCTGGTGATACTGAAGACTaGGGAATAATAATAACTGGT +
Preference number: 4 (lower is better)
Translates to: LDIHDKNYQVLSLVYNHSGDTED*GIIITG
Trigger: ACCAGTTATTATTATTCCTCAGTCTTCAGTATCACC...AGAATGATTATACACTAATGAGAGGACTTGGTAGTTTTTGTCGTGGATGTCAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR TCA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGACTTGTTTTCAACTCTaGTTAAACCCAGATCTGCTA +
Preference number: 4 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRTCFQL*LNPDLL
Trigger: TAGCAGATCTGGGTTTAATCAGAGTTGAAAACAAGT...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR TCA 90 bp AACATGTCATTTCTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCACTTGTTTTCAACTCTaGTTAAACCCAGATCTGCTA +
Preference number: 4 (lower is better)
Translates to: NMSFLPLVTFLHSITWFTTCFQL*LNPDLL
Trigger: TAGCAGATCTGGGTTTAATCAGAGTTGAAAACAAGT...GGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAGAAATGACATGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR TCA 90 bp AACATGTCATTTCTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCACAGCTTCAACTGAGTaGGTTCGATGTTCATTTTAT +
Preference number: 4 (lower is better)
Translates to: NMSFLPLVTFLHSITWFTTASTE*VRCSFY
Trigger: ATAAAATGAACATCGAACTCACTCAGTTGAAGCTGT...GGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAGAAATGACATGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR TCA 90 bp GTAACAGTATCTGCTTCTGAGCTCAATAAAGGCTTTCATCTATTAAACGCAGAAACAGCTTCAACTGAGTaGGTTCGATGTTCATTTTAT +
Preference number: 4 (lower is better)
Translates to: VTVSASELNKGFHLLNAETASTE*VRCSFY
Trigger: ATAAAATGAACATCGAACTCACTCAGTTGAAGCTGT...TTCTGCGTTTAATAGATGAAAGCCTTTATTGAGCTCAGAAGCAGATACTGTTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR TCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTATGGTCAGGTACACTTaGAACATCAACTTTTCTCAC +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFMVRYT*NINFSH
Trigger: GTGAGAAAAGTTGATGTTTCAAGTGTACCTGACCAT...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR TCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAAAATCTTCTTGTTCTTTaGGATGGTCAGGTACACTTG +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKNLLVL*DGQVHL
Trigger: CAAGTGTACCTGACCATCTCAAAGAACAAGAAGATT...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR TCA 90 bp CTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCAAGAATGTTAACCTCCAGATTCCTGGTTaGTATCATTGTTATAAAGGA +
Preference number: 4 (lower is better)
Translates to: LPLVTFLHSITWFTKNVNLQIPG*YHCYKG
Trigger: TCCTTTATAACAATGATATCAACCAGGAATCTGGAG...GTTAACATTCTTGGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR TCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTTGGAAACTGTCATTATaGAATGCAACTCCAGATTCC +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFWKLSL*NATPDS
Trigger: GGAATCTGGAGTTGCATTTCATAATGACAGTTTCCA...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR TCA 90 bp CTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCAAGAATGTTAACAGCAAACTTTTATCCTaGACTGGGTTCTTCTTTACA +
Preference number: 4 (lower is better)
Translates to: LPLVTFLHSITWFTKNVNSKLLS*TGFFFT
Trigger: TGTAAAGAAGAACCCAGTTCAGGATAAAAGTTTGCT...GTTAACATTCTTGGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR TCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAAGTAGATTCTTTGTACTaGTGCTCTAAGATTCCAGCT +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKVDSLY*CSKIPA
Trigger: AGCTGGAATCTTAGAGCATCAGTACAAAGAATCTAC...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR TCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAAGAAGATTCCGCAAAGTaGGAGAAGGATAAAGATGAA +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKEDSAK*EKDKDE
Trigger: TTCATCTTTATCCTTCTCTCACTTTGCGGAATCTTC...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR TCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTGAAGATTCCGCAAAGTaGGAGAAGGATAAAGATGAA +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFEDSAK*EKDKDE
Trigger: TTCATCTTTATCCTTCTCTCACTTTGCGGAATCTTC...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR TCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTCCATTATTTCACCACTaGTTCTCGAATGCAGAACAT +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFPLFHH*FSNAEH
Trigger: ATGTTCTGCATTCGAGAATCAGTGGTGAAATAATGG...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR TCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTGCTGGATGTTTCACATaGATATCTTCTGAACGATAC +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFAGCFT*ISSERY
Trigger: GTATCGTTCAGAAGATATTCATGTGAAACATCCAGC...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR TCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTTTTATTAGTTGGCATTaGGCCATCAGATGCAATCTC +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFFISWH*AIRCNL
Trigger: GAGATTGCATCTGATGGCTCAATGCCAACTAATAAA...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
37% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR TCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAATGGAAGGCACTCTaGAGAAGCAATATAGTTCCA +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFKWKAL*RSNIVP
Trigger: TGGAACTATATTGCTTCTTCAGAGTGCCTTCCATTT...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR TCA 90 bp CTTGACATCCACGACAAAAACTACCAAGTCCTCTCATTAGTGTATAATCATTCTAAAAGTTATGACAGTTaGATGTTCGGCAGTGTTTAC +
Preference number: 4 (lower is better)
Translates to: LDIHDKNYQVLSLVYNHSKSYDS*MFGSVY
Trigger: GTAAACACTGCCGAACATTCAACTGTCATAACTTTT...AGAATGATTATACACTAATGAGAGGACTTGGTAGTTTTTGTCGTGGATGTCAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000645819.1
ENST00000649766.1
CDS-3UTR TCA 90 bp GTAACAGTATCTGCTTCTGAGCTCAATAAAGGCTTTCATCTATTAAACGCAGAAAAAAGTTATGACAGTTaGATGTTCGGCAGTGTTTAC +
Preference number: 4 (lower is better)
Translates to: VTVSASELNKGFHLLNAEKSYDS*MFGSVY
Trigger: GTAAACACTGCCGAACATTCAACTGTCATAACTTTT...TTCTGCGTTTAATAGATGAAAGCCTTTATTGAGCTCAGAAGCAGATACTGTTAC
37% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000645819.1
ENST00000649766.1
CDS-3UTR TCA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGAATCAGAAAAAGTTATaGCAGTTGAATGTTCGGCAG +
Preference number: 4 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRNQKKL*QLNVRQ
Trigger: CTGCCGAACATTCAACTGTCATAACTTTTTCTGATT...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR TCA 90 bp CTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCAAGAATGTTAACAATCAGAAAAAGTTATaGCAGTTGAATGTTCGGCAG +
Preference number: 4 (lower is better)
Translates to: LPLVTFLHSITWFTKNVNNQKKL*QLNVRQ
Trigger: CTGCCGAACATTCAACTGTCATAACTTTTTCTGATT...GTTAACATTCTTGGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR TCA 90 bp GTAACAGTATCTGCTTCTGAGCTCAATAAAGGCTTTCATCTATTAAACGCAGAAAATCAGAAAAAGTTATaGCAGTTGAATGTTCGGCAG +
Preference number: 4 (lower is better)
Translates to: VTVSASELNKGFHLLNAENQKKL*QLNVRQ
Trigger: CTGCCGAACATTCAACTGTCATAACTTTTTCTGATT...TTCTGCGTTTAATAGATGAAAGCCTTTATTGAGCTCAGAAGCAGATACTGTTAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000645819.1
ENST00000649766.1
CDS-3UTR TCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAACCAGCCATGGTCTCTTaGTATTTGATGTTTCTGATA +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKPAMVS*YLMFLI
Trigger: TATCAGAAACATCAAATATCAAGAGACCATGGCTGG...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR TCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTCCAGCCATGGTCTCTTaGTATTTGATGTTTCTGATA +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFPAMVS*YLMFLI
Trigger: TATCAGAAACATCAAATATCAAGAGACCATGGCTGG...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR TCA 90 bp CTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCAAGAATGTTAACCTTAAACTTCTCTGGTaGGAAGACTGCTTAAATTCA +
Preference number: 4 (lower is better)
Translates to: LPLVTFLHSITWFTKNVNLKLLW*EDCLNS
Trigger: TGAATTTAAGCAGTCTTCTCACCAGAGAAGTTTAAG...GTTAACATTCTTGGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR TCA 90 bp AACATGTCATTTCTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCCTTAAACTTCTCTGGTaGGAAGACTGCTTAAATTCA +
Preference number: 4 (lower is better)
Translates to: NMSFLPLVTFLHSITWFTLKLLW*EDCLNS
Trigger: TGAATTTAAGCAGTCTTCTCACCAGAGAAGTTTAAG...GGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAGAAATGACATGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR TCA 90 bp CTTGACATCCACGACAAAAACTACCAAGTCCTCTCATTAGTGTATAATCATTCTTTTAAGGCCATTTCCTaGATGAGGACCATAAAATAC +
Preference number: 4 (lower is better)
Translates to: LDIHDKNYQVLSLVYNHSFKAIS*MRTIKY
Trigger: GTATTTTATGGTCCTCATTCAGGAAATGGCCTTAAA...AGAATGATTATACACTAATGAGAGGACTTGGTAGTTTTTGTCGTGGATGTCAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000645819.1
ENST00000649766.1
CDS-3UTR TCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAAGCTCCTAGAAACCCTTaGTCAATTTTTAAGGCCATT +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKAPRNP*SIFKAI
Trigger: AATGGCCTTAAAAATTGATCAAGGGTTTCTAGGAGC...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR TCA 90 bp TATGCTTTTCAACAGCAAGTTGACAGAATGAACTGCAAACATTTCCTGTTTTTCGCTCCTAGAAACCCTTaGTCAATTTTTAAGGCCATT +
Preference number: 4 (lower is better)
Translates to: YAFQQQVDRMNCKHFLFFAPRNP*SIFKAI
Trigger: AATGGCCTTAAAAATTGATCAAGGGTTTCTAGGAGC...GAAAAACAGGAAATGTTTGCAGTTCATTCTGTCAACTTGCTGTTGAAAAGCATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR TCA 90 bp GTAACAGTATCTGCTTCTGAGCTCAATAAAGGCTTTCATCTATTAAACGCAGAATTTTCAACAGCAAGTTaGCAGAATGAACTGCAAACA +
Preference number: 4 (lower is better)
Translates to: VTVSASELNKGFHLLNAEFSTAS*QNELQT
Trigger: TGTTTGCAGTTCATTCTGTCAACTTGCTGTTGAAAA...TTCTGCGTTTAATAGATGAAAGCCTTTATTGAGCTCAGAAGCAGATACTGTTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000645819.1
ENST00000649766.1
CDS-3UTR TCA 90 bp GTAACAGTATCTGCTTCTGAGCTCAATAAAGGCTTTCATCTATTAAACGCAGAAAATTGCAAAAAGCCATaGATAAGGAAGAGGAATCCA +
Preference number: 4 (lower is better)
Translates to: VTVSASELNKGFHLLNAENCKKP*IRKRNP
Trigger: TGGATTCCTCTTCCTTATTCATGGCTTTTTGCAATT...TTCTGCGTTTAATAGATGAAAGCCTTTATTGAGCTCAGAAGCAGATACTGTTAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR TCA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGGAGAAATGGAAGCAATaGAGTTCCAATAATCAGCTA +
Preference number: 4 (lower is better)
Translates to: PQVFICSQSHYYEKFRWREKWKQ*SSNNQL
Trigger: TAGCTGATTATTGGAACTTCATTGCTTCCATTTCTC...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649766.1
CDS-3UTR TCA 90 bp CTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCAAGAATGTTAACCTCCTTCCAACTTTTTaGTATGATTCTAGTCATTCC +
Preference number: 4 (lower is better)
Translates to: LPLVTFLHSITWFTKNVNLLPTF*YDSSHS
Trigger: GGAATGACTAGAATCATATCAAAAAGTTGGAAGGAG...GTTAACATTCTTGGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR GCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTTGGCTTATCTTTTTCTaGTGCTTTTTGAAGGGCTTC +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFWLIFF*CFLKGF
Trigger: GAAGCCCTTCAAAAAGCAGCAGAAAAAGATAAGCCA...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000395898.3
CDS-3UTR GCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTTCTGGTAAGACATGCTaGAATTTACATTCCAGTAGG +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFSGKTC*NLHSSR
Trigger: CCTACTGGAATGTAAATTGCAGCATGTCTTACCAGA...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR GCA 90 bp GTAACAGTATCTGCTTCTGAGCTCAATAAAGGCTTTCATCTATTAAACGCAGAAATCTCTGGTAAGACATaGTGCAATTTACATTCCAGT +
Preference number: 4 (lower is better)
Translates to: VTVSASELNKGFHLLNAEISGKT*CNLHSS
Trigger: ACTGGAATGTAAATTGCAGCATGTCTTACCAGAGAT...TTCTGCGTTTAATAGATGAAAGCCTTTATTGAGCTCAGAAGCAGATACTGTTAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR GCA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGAAGAACAGAATCAATTaGATATTTCCACCATCGTCG +
Preference number: 4 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRKNRIN*IFPPSS
Trigger: CGACGATGGTGGAAATATGCAATTGATTCTGTTCTT...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR GCA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGATATGGGCAACATACTaGTTAGGTAAAGTTAGGTTG +
Preference number: 4 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRIWATY*LGKVRL
Trigger: CAACCTAACTTTACCTAAGCAGTATGTTGCCCATAT...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR GCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAAGATGGCACAATATCCTaGTGTCTCAAACCTGTTATA +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKDGTIS*CLKPVI
Trigger: TATAACAGGTTTGAGACAGCAGGATATTGTGCCATC...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR GCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTGATGGCACAATATCCTaGTGTCTCAAACCTGTTATA +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFDGTIS*CLKPVI
Trigger: TATAACAGGTTTGAGACAGCAGGATATTGTGCCATC...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR GCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTTCAGAAATTCTCACATaGATCAAAGGAAGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFSEILT*IKGSPP
Trigger: AGGAGGACTTCCTTTGATGCATGTGAGAATTTCTGA...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR GCA 90 bp AACATGTCATTTCTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCAAGATCTACCACTACTaGATTGGTGGAAATAGAAGA +
Preference number: 4 (lower is better)
Translates to: NMSFLPLVTFLHSITWFTKIYHY*IGGNRR
Trigger: TCTTCTATTTCCACCAATGCAGTAGTGGTAGATCTT...GGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAGAAATGACATGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR GCA 90 bp GTAACAGTATCTGCTTCTGAGCTCAATAAAGGCTTTCATCTATTAAACGCAGAAAAGATCTACCACTACTaGATTGGTGGAAATAGAAGA +
Preference number: 4 (lower is better)
Translates to: VTVSASELNKGFHLLNAEKIYHY*IGGNRR
Trigger: TCTTCTATTTCCACCAATGCAGTAGTGGTAGATCTT...TTCTGCGTTTAATAGATGAAAGCCTTTATTGAGCTCAGAAGCAGATACTGTTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR GCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTGCAAACACATCAGTCTaGTTAGGCTTCACAGAAATA +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFANTSV*LGFTEI
Trigger: TATTTCTGTGAAGCCTAAGCAGACTGATGTGTTTGC...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR GCA 90 bp TATGCTTTTCAACAGCAAGTTGACAGAATGAACTGCAAACATTTCCTGTTTTTCGCAAACACATCAGTCTaGTTAGGCTTCACAGAAATA +
Preference number: 4 (lower is better)
Translates to: YAFQQQVDRMNCKHFLFFANTSV*LGFTEI
Trigger: TATTTCTGTGAAGCCTAAGCAGACTGATGTGTTTGC...GAAAAACAGGAAATGTTTGCAGTTCATTCTGTCAACTTGCTGTTGAAAAGCATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR GCA 90 bp AACATGTCATTTCTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCAATCATTCTCGATGTTaGTCTCTCAATTCCTTCTCT +
Preference number: 4 (lower is better)
Translates to: NMSFLPLVTFLHSITWFTNHSRC*SLNSFS
Trigger: AGAGAAGGAATTGAGAGAGCAACATCGAGAATGATT...GGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAGAAATGACATGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR GCA 90 bp CTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCAAGAATGTTAACAATAAAGAACAGGGCTaGAAGACTGTGGTAATGTTT +
Preference number: 4 (lower is better)
Translates to: LPLVTFLHSITWFTKNVNNKEQG*KTVVMF
Trigger: AAACATTACCACAGTCTTGCAGCCCTGTTCTTTATT...GTTAACATTCTTGGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR GCA 90 bp GTAACAGTATCTGCTTCTGAGCTCAATAAAGGCTTTCATCTATTAAACGCAGAAAATAAAGAACAGGGCTaGAAGACTGTGGTAATGTTT +
Preference number: 4 (lower is better)
Translates to: VTVSASELNKGFHLLNAENKEQG*KTVVMF
Trigger: AAACATTACCACAGTCTTGCAGCCCTGTTCTTTATT...TTCTGCGTTTAATAGATGAAAGCCTTTATTGAGCTCAGAAGCAGATACTGTTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR GCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAATGTTTTTGGAGACAATaGAGCCATGATTGTCAACAC +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKCFWRQ*SHDCQH
Trigger: GTGTTGACAATCATGGCTGCATTGTCTCCAAAAACA...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR GCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTTGTTTTTGGAGACAATaGAGCCATGATTGTCAACAC +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFCFWRQ*SHDCQH
Trigger: GTGTTGACAATCATGGCTGCATTGTCTCCAAAAACA...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR GCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAATTCCGTTATTTCTGTTaGCGTGTCAACACCAAGAAA +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKFRYFC*RVNTKK
Trigger: TTTCTTGGTGTTGACACGGCAACAGAAATAACGGAA...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR GCA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGCTAAGCTCAATAAAGTaGCATTATCCTGTCGGTTAT +
Preference number: 4 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRLSSIK*HYPVGY
Trigger: ATAACCGACAGGATAATGGCACTTTATTGAGCTTAG...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR GCA 90 bp AACATGTCATTTCTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCCTAAGCTCAATAAAGTaGCATTATCCTGTCGGTTAT +
Preference number: 4 (lower is better)
Translates to: NMSFLPLVTFLHSITWFTLSSIK*HYPVGY
Trigger: ATAACCGACAGGATAATGGCACTTTATTGAGCTTAG...GGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAGAAATGACATGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR GCA 90 bp CTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCAAGAATGTTAACTTCCCCAACATTTGCTaGATATGTCCATGTAAGTTT +
Preference number: 4 (lower is better)
Translates to: LPLVTFLHSITWFTKNVNFPNIC*ICPCKF
Trigger: AAACTTACATGGACATATGCAGCAAATGTTGGGGAA...GTTAACATTCTTGGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR GCA 90 bp GATACCCCAAAGATTTTCCATTTCCTTAGACGTATCTTTGGATCCATCTTCTTTTTCCCCAACATTTGCTaGATATGTCCATGTAAGTTT +
Preference number: 4 (lower is better)
Translates to: DTPKIFHFLRRIFGSIFFFPNIC*ICPCKF
Trigger: AAACTTACATGGACATATGCAGCAAATGTTGGGGAA...AAAGAAGATGGATCCAAAGATACGTCTAAGGAAATGGAAAATCTTTGGGGTATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR GCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAAGTGTATCTGGATGTTTaGATCATATGGAAACTGTCC +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKVYLDV*IIWKLS
Trigger: GGACAGTTTCCATATGATGCAAACATCCAGATACAC...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR GCA 90 bp GTAACAGTATCTGCTTCTGAGCTCAATAAAGGCTTTCATCTATTAAACGCAGAATGCCACACAGCAATTTaGCTAATTACATGTTCAACT +
Preference number: 4 (lower is better)
Translates to: VTVSASELNKGFHLLNAECHTAI*LITCST
Trigger: AGTTGAACATGTAATTAGGCAAATTGCTGTGTGGCA...TTCTGCGTTTAATAGATGAAAGCCTTTATTGAGCTCAGAAGCAGATACTGTTAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000645819.1
ENST00000649766.1
CDS-3UTR GCA 90 bp CTTGACATCCACGACAAAAACTACCAAGTCCTCTCATTAGTGTATAATCATTCTATCTATGTATTCAAGTaGCACACAGCAATTTGCCTA +
Preference number: 4 (lower is better)
Translates to: LDIHDKNYQVLSLVYNHSIYVFK*HTAICL
Trigger: TAGGCAAATTGCTGTGTGGCACTTGAATACATAGAT...AGAATGATTATACACTAATGAGAGGACTTGGTAGTTTTTGTCGTGGATGTCAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000645819.1
ENST00000649766.1
CDS-3UTR GCA 90 bp GTAACAGTATCTGCTTCTGAGCTCAATAAAGGCTTTCATCTATTAAACGCAGAAATCTATGTATTCAAGTaGCACACAGCAATTTGCCTA +
Preference number: 4 (lower is better)
Translates to: VTVSASELNKGFHLLNAEIYVFK*HTAICL
Trigger: TAGGCAAATTGCTGTGTGGCACTTGAATACATAGAT...TTCTGCGTTTAATAGATGAAAGCCTTTATTGAGCTCAGAAGCAGATACTGTTAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTTTCAGGGTCATAATATaGGCAACATACTGCTTAGGT +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFFRVII*ATYCLG
Trigger: ACCTAAGCAGTATGTTGCCCATATTATGACCCTGAA...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
37% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAAACTTTTACAAGTCTGTaGTTCTCCATCTTCAGCATC +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKTFTSL*FSIFSI
Trigger: GATGCTGAAGATGGAGAACCACAGACTTGTAAAAGT...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTACTTTTACAAGTCTGTaGTTCTCCATCTTCAGCATC +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFTFTSL*FSIFSI
Trigger: GATGCTGAAGATGGAGAACCACAGACTTGTAAAAGT...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CCA 90 bp GTAACAGTATCTGCTTCTGAGCTCAATAAAGGCTTTCATCTATTAAACGCAGAAGCTTTGATCATCAGATaGAATAATGGTTGTGAGGTA +
Preference number: 4 (lower is better)
Translates to: VTVSASELNKGFHLLNAEALIIR*NNGCEV
Trigger: TACCTCACAACCATTATTCCATCTGATGATCAAAGC...TTCTGCGTTTAATAGATGAAAGCCTTTATTGAGCTCAGAAGCAGATACTGTTAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR CCA 90 bp AACATGTCATTTCTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCCCCCTCAGTAGCATCTaGATACAAATCCAAATTAAA +
Preference number: 4 (lower is better)
Translates to: NMSFLPLVTFLHSITWFTPLSSI*IQIQIK
Trigger: TTTAATTTGGATTTGTATCCAGATGCTACTGAGGGG...GGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAGAAATGACATGTT
37% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CCA 90 bp CTTGACATCCACGACAAAAACTACCAAGTCCTCTCATTAGTGTATAATCATTCTCCCCTCAGTAGCATCTaGATACAAATCCAAATTAAA +
Preference number: 4 (lower is better)
Translates to: LDIHDKNYQVLSLVYNHSPLSSI*IQIQIK
Trigger: TTTAATTTGGATTTGTATCCAGATGCTACTGAGGGG...AGAATGATTATACACTAATGAGAGGACTTGGTAGTTTTTGTCGTGGATGTCAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR CCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTGCACACCATCCACTTTaGACATGTCAGTATACAAAT +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFAHHPL*TCQYTN
Trigger: ATTTGTATACTGACATGTCCAAAGTGGATGGTGTGC...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTGACTCTTTGGCTGTCTaGAAATTATTCAGGAAGTTC +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFDSLAV*KLFRKF
Trigger: GAACTTCCTGAATAATTTCCAGACAGCCAAAGAGTC...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAAGACTCTTTGGCTGTCTaGAAATTATTCAGGAAGTTC +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKDSLAV*KLFRKF
Trigger: GAACTTCCTGAATAATTTCCAGACAGCCAAAGAGTC...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CCA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGTCTCTTGTACTCTTaGTTTCACTTTATCCAAGTC +
Preference number: 4 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRCLLYS*FHFIQV
Trigger: GACTTGGATAAAGTGAAACCAAGAGTACAAGAGACA...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CCA 90 bp AACATGTCATTTCTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCTGTCTCTTGTACTCTTaGTTTCACTTTATCCAAGTC +
Preference number: 4 (lower is better)
Translates to: NMSFLPLVTFLHSITWFTCLLYS*FHFIQV
Trigger: GACTTGGATAAAGTGAAACCAAGAGTACAAGAGACA...GGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAGAAATGACATGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CCA 90 bp CTTGACATCCACGACAAAAACTACCAAGTCCTCTCATTAGTGTATAATCATTCTTGTCTCTTGTACTCTTaGTTTCACTTTATCCAAGTC +
Preference number: 4 (lower is better)
Translates to: LDIHDKNYQVLSLVYNHSCLLYS*FHFIQV
Trigger: GACTTGGATAAAGTGAAACCAAGAGTACAAGAGACA...AGAATGATTATACACTAATGAGAGGACTTGGTAGTTTTTGTCGTGGATGTCAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR CCA 90 bp GATACCCCAAAGATTTTCCATTTCCTTAGACGTATCTTTGGATCCATCTTCTTTTGTCTCTTGTACTCTTaGTTTCACTTTATCCAAGTC +
Preference number: 4 (lower is better)
Translates to: DTPKIFHFLRRIFGSIFFCLLYS*FHFIQV
Trigger: GACTTGGATAAAGTGAAACCAAGAGTACAAGAGACA...AAAGAAGATGGATCCAAAGATACGTCTAAGGAAATGGAAAATCTTTGGGGTATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR CCA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTCAAACACATCCTTTTaGGAAATGTTGCTGGATACA +
Preference number: 4 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRSNTSF*EMLLDT
Trigger: TGTATCCAGCAACATTTCCCAAAAGGATGTGTTTGA...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CCA 90 bp CTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCAAGAATGTTAACCAGCCTTTTTGTGAATaGACTGCAAATCTACATTCA +
Preference number: 4 (lower is better)
Translates to: LPLVTFLHSITWFTKNVNQPFCE*TANLHS
Trigger: TGAATGTAGATTTGCAGTCCATTCACAAAAAGGCTG...GTTAACATTCTTGGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CCA 90 bp CTTGACATCCACGACAAAAACTACCAAGTCCTCTCATTAGTGTATAATCATTCTCAGCCTTTTTGTGAATaGACTGCAAATCTACATTCA +
Preference number: 4 (lower is better)
Translates to: LDIHDKNYQVLSLVYNHSQPFCE*TANLHS
Trigger: TGAATGTAGATTTGCAGTCCATTCACAAAAAGGCTG...AGAATGATTATACACTAATGAGAGGACTTGGTAGTTTTTGTCGTGGATGTCAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR CCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTTTTTATCTCCATCCCTaGAATTTGCACATACCATGC +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFFYLHP*NLHIPC
Trigger: GCATGGTATGTGCAAATTCCAGGGATGGAGATAAAA...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
37% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAATTTTATCTCCATCCCTaGAATTTGCACATACCATGC +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKFYLHP*NLHIPC
Trigger: GCATGGTATGTGCAAATTCCAGGGATGGAGATAAAA...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CCA 90 bp TATGCTTTTCAACAGCAAGTTGACAGAATGAACTGCAAACATTTCCTGTTTTTCTTTTATCTCCATCCCTaGAATTTGCACATACCATGC +
Preference number: 4 (lower is better)
Translates to: YAFQQQVDRMNCKHFLFFFYLHP*NLHIPC
Trigger: GCATGGTATGTGCAAATTCCAGGGATGGAGATAAAA...GAAAAACAGGAAATGTTTGCAGTTCATTCTGTCAACTTGCTGTTGAAAAGCATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR CCA 90 bp CTTGACATCCACGACAAAAACTACCAAGTCCTCTCATTAGTGTATAATCATTCTTCTTGTTCTTTGAGATaGTCAGGTACACTTGAAACA +
Preference number: 4 (lower is better)
Translates to: LDIHDKNYQVLSLVYNHSSCSLR*SGTLET
Trigger: TGTTTCAAGTGTACCTGACCATCTCAAAGAACAAGA...AGAATGATTATACACTAATGAGAGGACTTGGTAGTTTTTGTCGTGGATGTCAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR CCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTTCAGAAATTCCACACTaGCACATACATACAGCTTGT +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFSEIPH*HIHTAC
Trigger: ACAAGCTGTATGTATGTGCCAGTGTGGAATTTCTGA...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CCA 90 bp ACCATAATACACTTTAGAAAACTTGTCTTCAGCACTACTAAAAACCCACTACACTCAGAAATTCCACACTaGCACATACATACAGCTTGT +
Preference number: 4 (lower is better)
Translates to: TIIHFRKLVFSTTKNPLHSEIPH*HIHTAC
Trigger: ACAAGCTGTATGTATGTGCCAGTGTGGAATTTCTGA...GTGTAGTGGGTTTTTAGTAGTGCTGAAGACAAGTTTTCTAAAGTGTATTATGGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR CCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAAAACAAATACCACTTCTaGATCTGTGATCATGGCCTT +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKNKYHF*ICDHGL
Trigger: AAGGCCATGATCACAGATCCAGAAGTGGTATTTGTT...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CCA 90 bp TATGCTTTTCAACAGCAAGTTGACAGAATGAACTGCAAACATTTCCTGTTTTTCAACAAATACCACTTCTaGATCTGTGATCATGGCCTT +
Preference number: 4 (lower is better)
Translates to: YAFQQQVDRMNCKHFLFFNKYHF*ICDHGL
Trigger: AAGGCCATGATCACAGATCCAGAAGTGGTATTTGTT...GAAAAACAGGAAATGTTTGCAGTTCATTCTGTCAACTTGCTGTTGAAAAGCATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR CCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTTCCAGTTCCAAATTCTaGCCAGCATCAACATCAAAA +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFSSSKF*PASTSK
Trigger: TTTTGATGTTGATGCTGGCCAGAATTTGGAACTGGA...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTCAGAATGACTGGCATTaGGATTCCGTACATTATACA +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFQNDWH*DSVHYT
Trigger: TGTATAATGTACGGAATCCCAATGCCAGTCATTCTG...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CCA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGATCCCTGAAATCAGCTaGATGTTTCACATGAATATC +
Preference number: 4 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRIPEIS*MFHMNI
Trigger: GATATTCATGTGAAACATCCAGCTGATTTCAGGGAT...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CCA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTATAAAAGAATGGTTTaGAAGATCCTTCACAGCCCA +
Preference number: 4 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRYKRMV*KILHSP
Trigger: TGGGCTGTGAAGGATCTTCCAAACCATTCTTTTATA...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CCA 90 bp GTAACAGTATCTGCTTCTGAGCTCAATAAAGGCTTTCATCTATTAAACGCAGAATATAAAAGAATGGTTTaGAAGATCCTTCACAGCCCA +
Preference number: 4 (lower is better)
Translates to: VTVSASELNKGFHLLNAEYKRMV*KILHSP
Trigger: TGGGCTGTGAAGGATCTTCCAAACCATTCTTTTATA...TTCTGCGTTTAATAGATGAAAGCCTTTATTGAGCTCAGAAGCAGATACTGTTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTTGTGAGGATGTCCCATaGTGTATGGTTCATTATCAA +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFCEDVP*CMVHYQ
Trigger: TTGATAATGAACCATACACCATGGGACATCCTCACA...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAATGTGAGGATGTCCCATaGTGTATGGTTCATTATCAA +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKCEDVP*CMVHYQ
Trigger: TTGATAATGAACCATACACCATGGGACATCCTCACA...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CCA 90 bp CTTGACATCCACGACAAAAACTACCAAGTCCTCTCATTAGTGTATAATCATTCTGAGGCGCATTTCCATTaGATCTTTATCAAAATTGAC +
Preference number: 4 (lower is better)
Translates to: LDIHDKNYQVLSLVYNHSEAHFH*IFIKID
Trigger: GTCAATTTTGATAAAGATCCAATGGAAATGCGCCTC...AGAATGATTATACACTAATGAGAGGACTTGGTAGTTTTTGTCGTGGATGTCAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CCA 90 bp GTAACAGTATCTGCTTCTGAGCTCAATAAAGGCTTTCATCTATTAAACGCAGAAGAGGCGCATTTCCATTaGATCTTTATCAAAATTGAC +
Preference number: 4 (lower is better)
Translates to: VTVSASELNKGFHLLNAEEAHFH*IFIKID
Trigger: GTCAATTTTGATAAAGATCCAATGGAAATGCGCCTC...TTCTGCGTTTAATAGATGAAAGCCTTTATTGAGCTCAGAAGCAGATACTGTTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CCA 90 bp GATACCCCAAAGATTTTCCATTTCCTTAGACGTATCTTTGGATCCATCTTCTTTGAGGCGCATTTCCATTaGATCTTTATCAAAATTGAC +
Preference number: 4 (lower is better)
Translates to: DTPKIFHFLRRIFGSIFFEAHFH*IFIKID
Trigger: GTCAATTTTGATAAAGATCCAATGGAAATGCGCCTC...AAAGAAGATGGATCCAAAGATACGTCTAAGGAAATGGAAAATCTTTGGGGTATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR CCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAATTCAGGGTCTGTTGTTaGGGTAAACAGTGCAATAAT +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKFRVCC*GKQCNN
Trigger: ATTATTGCACTGTTTACCCCAACAACAGACCCTGAA...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTTTAATACATTTCTTTTaGGGGAAAGCCTGTCATGGG +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFLIHFF*GKACHG
Trigger: CCCATGACAGGCTTTCCCCCAAAAGAAATGTATTAA...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
37% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000649766.1
CDS-3UTR TCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAAATCATACTTAAGTACTaGGGTTTGGTCAGTTCAATG +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKIILKY*GLVSSM
Trigger: CATTGAACTGACCAAACCTCAGTACTTAAGTATGAT...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR TCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTTTTTATGTTACTCCATaGCCACATCTGTGTATACCT +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFFYVTP*PHLCIP
Trigger: AGGTATACACAGATGTGGTCATGGAGTAACATAAAA...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
36% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR TCA 90 bp ACCATAATACACTTTAGAAAACTTGTCTTCAGCACTACTAAAAACCCACTACACTTTTATGTTACTCCATaGCCACATCTGTGTATACCT +
Preference number: 4 (lower is better)
Translates to: TIIHFRKLVFSTTKNPLHFYVTP*PHLCIP
Trigger: AGGTATACACAGATGTGGTCATGGAGTAACATAAAA...GTGTAGTGGGTTTTTAGTAGTGCTGAAGACAAGTTTTCTAAAGTGTATTATGGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR TCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAACTTCATCAATGTTGCTaGTGTTATTTGCTCAAGATC +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKLHQCC*CYLLKI
Trigger: GATCTTGAGCAAATAACATCAGCAACATTGATGAAG...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR TCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAACAATATATGCATAGTTaGTGGATGCTGAAATCGACA +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKQYMHS*WMLKST
Trigger: TGTCGATTTCAGCATCCATCAACTATGCATATATTG...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR TCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAATTTCGTTGCAAACAATaGCACAGAAAGCATTCAACT +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKFRCKQ*HRKHST
Trigger: AGTTGAATGCTTTCTGTGTCATTGTTTGCAACGAAA...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR TCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTTTTCGTTGCAAACAATaGCACAGAAAGCATTCAACT +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFFRCKQ*HRKHST
Trigger: AGTTGAATGCTTTCTGTGTCATTGTTTGCAACGAAA...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
36% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR TCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAAATCATGTACATCTTGTaGTATAGAGATTTCAAGGGG +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKIMYIL*YRDFKG
Trigger: CCCCTTGAAATCTCTATATCACAAGATGTACATGAT...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR TCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAAGGTGATACTGAAGACTaGGGAATAATAATAACTGGT +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKGDTED*GIIITG
Trigger: ACCAGTTATTATTATTCCTCAGTCTTCAGTATCACC...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR TCA 90 bp ACCATAATACACTTTAGAAAACTTGTCTTCAGCACTACTAAAAACCCACTACACACTTGTTTTCAACTCTaGTTAAACCCAGATCTGCTA +
Preference number: 4 (lower is better)
Translates to: TIIHFRKLVFSTTKNPLHTCFQL*LNPDLL
Trigger: TAGCAGATCTGGGTTTAATCAGAGTTGAAAACAAGT...GTGTAGTGGGTTTTTAGTAGTGCTGAAGACAAGTTTTCTAAAGTGTATTATGGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR TCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTACAGCTTCAACTGAGTaGGTTCGATGTTCATTTTAT +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFTASTE*VRCSFY
Trigger: ATAAAATGAACATCGAACTCACTCAGTTGAAGCTGT...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR TCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAACTCCAGATTCCTGGTTaGTATCATTGTTATAAAGGA +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKLQIPG*YHCYKG
Trigger: TCCTTTATAACAATGATATCAACCAGGAATCTGGAG...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR TCA 90 bp ACCATAATACACTTTAGAAAACTTGTCTTCAGCACTACTAAAAACCCACTACACCTCCAGATTCCTGGTTaGTATCATTGTTATAAAGGA +
Preference number: 4 (lower is better)
Translates to: TIIHFRKLVFSTTKNPLHLQIPG*YHCYKG
Trigger: TCCTTTATAACAATGATATCAACCAGGAATCTGGAG...GTGTAGTGGGTTTTTAGTAGTGCTGAAGACAAGTTTTCTAAAGTGTATTATGGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR TCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAATATATTTTGCTTTCCTaGAGCCCACGTACATTTTTC +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKYILLS*SPRTFF
Trigger: GAAAAATGTACGTGGGCTTCAGGAAAGCAAAATATA...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR TCA 90 bp ACCATAATACACTTTAGAAAACTTGTCTTCAGCACTACTAAAAACCCACTACACTATATTTTGCTTTCCTaGAGCCCACGTACATTTTTC +
Preference number: 4 (lower is better)
Translates to: TIIHFRKLVFSTTKNPLHYILLS*SPRTFF
Trigger: GAAAAATGTACGTGGGCTTCAGGAAAGCAAAATATA...GTGTAGTGGGTTTTTAGTAGTGCTGAAGACAAGTTTTCTAAAGTGTATTATGGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR TCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAAAATGTTCAATGCCTTTaGAGCTTTCCGTTATTTCTG +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKNVQCL*SFPLFL
Trigger: CAGAAATAACGGAAAGCTTCAAAGGCATTGAACATT...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR TCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAGCAAACTTTTATCCTaGACTGGGTTCTTCTTTACA +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFSKLLS*TGFFFT
Trigger: TGTAAAGAAGAACCCAGTTCAGGATAAAAGTTTGCT...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR TCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAAAAAAGTTATGACAGTTaGATGTTCGGCAGTGTTTAC +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKKSYDS*MFGSVY
Trigger: GTAAACACTGCCGAACATTCAACTGTCATAACTTTT...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
36% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR TCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAATCAGAAAAAGTTATaGCAGTTGAATGTTCGGCAG +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFNQKKL*QLNVRQ
Trigger: CTGCCGAACATTCAACTGTCATAACTTTTTCTGATT...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR TCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTCTTAAACTTCTCTGGTaGGAAGACTGCTTAAATTCA +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFLKLLW*EDCLNS
Trigger: TGAATTTAAGCAGTCTTCTCACCAGAGAAGTTTAAG...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR TCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAACTTAAACTTCTCTGGTaGGAAGACTGCTTAAATTCA +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKLKLLW*EDCLNS
Trigger: TGAATTTAAGCAGTCTTCTCACCAGAGAAGTTTAAG...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR TCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTTTTAAGGCCATTTCCTaGATGAGGACCATAAAATAC +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFFKAIS*MRTIKY
Trigger: GTATTTTATGGTCCTCATTCAGGAAATGGCCTTAAA...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
36% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR TCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAATTTAAGGCCATTTCCTaGATGAGGACCATAAAATAC +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKFKAIS*MRTIKY
Trigger: GTATTTTATGGTCCTCATTCAGGAAATGGCCTTAAA...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR TCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTTTTTCAACAGCAAGTTaGCAGAATGAACTGCAAACA +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFFSTAS*QNELQT
Trigger: TGTTTGCAGTTCATTCTGTCAACTTGCTGTTGAAAA...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
36% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR GCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAACTTATCTTTTTCTGCTaGTTTTTGAAGGGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKLIFFC*FLKGFF
Trigger: GAAGAAGCCCTTCAAAAAGCAGCAGAAAAAGATAAG...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000395898.3
CDS-3UTR GCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTCTGCTTCATTTAATATaGATGGAGTCCAGTGTTCAT +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFLLHLI*MESSVH
Trigger: ATGAACACTGGACTCCATGCATATTAAATGAAGCAG...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR GCA 90 bp ACCATAATACACTTTAGAAAACTTGTCTTCAGCACTACTAAAAACCCACTACACCTGCTTCATTTAATATaGATGGAGTCCAGTGTTCAT +
Preference number: 4 (lower is better)
Translates to: TIIHFRKLVFSTTKNPLHLLHLI*MESSVH
Trigger: ATGAACACTGGACTCCATGCATATTAAATGAAGCAG...GTGTAGTGGGTTTTTAGTAGTGCTGAAGACAAGTTTTCTAAAGTGTATTATGGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR GCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAAATCTCTGGTAAGACATaGTGCAATTTACATTCCAGT +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKISGKT*CNLHSS
Trigger: ACTGGAATGTAAATTGCAGCATGTCTTACCAGAGAT...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR GCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAGAACAGAATCAATTaGATATTTCCACCATCGTCG +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFKNRIN*IFPPSS
Trigger: CGACGATGGTGGAAATATGCAATTGATTCTGTTCTT...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR GCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAATTTTTCCTTAATTTTTaGCCAGACCGAATCACCTCA +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKFFLNF*PDRITS
Trigger: TGAGGTGATTCGGTCTGGGCAAAAATTAAGGAAAAA...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR GCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTTTTTTCCTTAATTTTTaGCCAGACCGAATCACCTCA +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFFFLNF*PDRITS
Trigger: TGAGGTGATTCGGTCTGGGCAAAAATTAAGGAAAAA...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
36% GC, longest homopolymer 9 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR GCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAAATATGGGCAACATACTaGTTAGGTAAAGTTAGGTTG +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKIWATY*LGKVRL
Trigger: CAACCTAACTTTACCTAAGCAGTATGTTGCCCATAT...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR GCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTGTTGCTGATGTTATTTaGTCAAGATCCAATCCCTTA +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFVADVI*SRSNPL
Trigger: TAAGGGATTGGATCTTGAGCAAATAACATCAGCAAC...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR GCA 90 bp ACCATAATACACTTTAGAAAACTTGTCTTCAGCACTACTAAAAACCCACTACACGTTGCTGATGTTATTTaGTCAAGATCCAATCCCTTA +
Preference number: 4 (lower is better)
Translates to: TIIHFRKLVFSTTKNPLHVADVI*SRSNPL
Trigger: TAAGGGATTGGATCTTGAGCAAATAACATCAGCAAC...GTGTAGTGGGTTTTTAGTAGTGCTGAAGACAAGTTTTCTAAAGTGTATTATGGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR GCA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGACAAGAGCTTGTGTTTaGAGCAACAGATTTAAAGAT +
Preference number: 4 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRTRACV*SNRFKD
Trigger: ATCTTTAAATCTGTTGCTGCAAACACAAGCTCTTGT...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR GCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAAAAGATCTACCACTACTaGATTGGTGGAAATAGAAGA +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKKIYHY*IGGNRR
Trigger: TCTTCTATTTCCACCAATGCAGTAGTGGTAGATCTT...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR GCA 90 bp AACATGTCATTTCTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCGTAAGCTTTGTTAGCTaGACATCCATTCTATCAATT +
Preference number: 4 (lower is better)
Translates to: NMSFLPLVTFLHSITWFTVSFVS*TSILSI
Trigger: AATTGATAGAATGGATGTGCAGCTAACAAAGCTTAC...GGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAGAAATGACATGTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR GCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAATCATTCTCGATGTTaGTCTCTCAATTCCTTCTCT +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFNHSRC*SLNSFS
Trigger: AGAGAAGGAATTGAGAGAGCAACATCGAGAATGATT...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR GCA 90 bp ACCATAATACACTTTAGAAAACTTGTCTTCAGCACTACTAAAAACCCACTACACAATCATTCTCGATGTTaGTCTCTCAATTCCTTCTCT +
Preference number: 4 (lower is better)
Translates to: TIIHFRKLVFSTTKNPLHNHSRC*SLNSFS
Trigger: AGAGAAGGAATTGAGAGAGCAACATCGAGAATGATT...GTGTAGTGGGTTTTTAGTAGTGCTGAAGACAAGTTTTCTAAAGTGTATTATGGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR GCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAATAAAGAACAGGGCTaGAAGACTGTGGTAATGTTT +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFNKEQG*KTVVMF
Trigger: AAACATTACCACAGTCTTGCAGCCCTGTTCTTTATT...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR GCA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTTTATTCCCTTCAGTTaGATCAATTTGTACCAAGAC +
Preference number: 4 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRFIPFS*INLYQD
Trigger: GTCTTGGTACAAATTGATGCAACTGAAGGGAATAAA...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR GCA 90 bp AACATGTCATTTCTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCTTTATTCCCTTCAGTTaGATCAATTTGTACCAAGAC +
Preference number: 4 (lower is better)
Translates to: NMSFLPLVTFLHSITWFTFIPFS*INLYQD
Trigger: GTCTTGGTACAAATTGATGCAACTGAAGGGAATAAA...GGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAGAAATGACATGTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR GCA 90 bp CTTGACATCCACGACAAAAACTACCAAGTCCTCTCATTAGTGTATAATCATTCTTTTATTCCCTTCAGTTaGATCAATTTGTACCAAGAC +
Preference number: 4 (lower is better)
Translates to: LDIHDKNYQVLSLVYNHSFIPFS*INLYQD
Trigger: GTCTTGGTACAAATTGATGCAACTGAAGGGAATAAA...AGAATGATTATACACTAATGAGAGGACTTGGTAGTTTTTGTCGTGGATGTCAAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000645819.1
ENST00000649766.1
CDS-3UTR GCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAACTAAGCTCAATAAAGTaGCATTATCCTGTCGGTTAT +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKLSSIK*HYPVGY
Trigger: ATAACCGACAGGATAATGGCACTTTATTGAGCTTAG...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR GCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTCTAAGCTCAATAAAGTaGCATTATCCTGTCGGTTAT +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFLSSIK*HYPVGY
Trigger: ATAACCGACAGGATAATGGCACTTTATTGAGCTTAG...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR GCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTTTCCCCAACATTTGCTaGATATGTCCATGTAAGTTT +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFFPNIC*ICPCKF
Trigger: AAACTTACATGGACATATGCAGCAAATGTTGGGGAA...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
36% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR GCA 90 bp ACCATAATACACTTTAGAAAACTTGTCTTCAGCACTACTAAAAACCCACTACACTTCCCCAACATTTGCTaGATATGTCCATGTAAGTTT +
Preference number: 4 (lower is better)
Translates to: TIIHFRKLVFSTTKNPLHFPNIC*ICPCKF
Trigger: AAACTTACATGGACATATGCAGCAAATGTTGGGGAA...GTGTAGTGGGTTTTTAGTAGTGCTGAAGACAAGTTTTCTAAAGTGTATTATGGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR GCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAATTCCCCAACATTTGCTaGATATGTCCATGTAAGTTT +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKFPNIC*ICPCKF
Trigger: AAACTTACATGGACATATGCAGCAAATGTTGGGGAA...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR GCA 90 bp ACCATAATACACTTTAGAAAACTTGTCTTCAGCACTACTAAAAACCCACTACACTCCCCTTTCCAAAAATaGAACTCGAGGAATTTAACA +
Preference number: 4 (lower is better)
Translates to: TIIHFRKLVFSTTKNPLHSPFQK*NSRNLT
Trigger: TGTTAAATTCCTCGAGTTGCATTTTTGGAAAGGGGA...GTGTAGTGGGTTTTTAGTAGTGCTGAAGACAAGTTTTCTAAAGTGTATTATGGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR CCA 90 bp GTAACAGTATCTGCTTCTGAGCTCAATAAAGGCTTTCATCTATTAAACGCAGAATTAAGTACTGAGGTTTaGTCAGTTCAATGGCAATAT +
Preference number: 4 (lower is better)
Translates to: VTVSASELNKGFHLLNAELSTEV*SVQWQY
Trigger: ATATTGCCATTGAACTGACCAAACCTCAGTACTTAA...TTCTGCGTTTAATAGATGAAAGCCTTTATTGAGCTCAGAAGCAGATACTGTTAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR CCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTGCTTTGATCATCAGATaGAATAATGGTTGTGAGGTA +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFALIIR*NNGCEV
Trigger: TACCTCACAACCATTATTCCATCTGATGATCAAAGC...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CCA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGCTTATGAACTGTCTTTaGATCAACATCTGTGACAAT +
Preference number: 4 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRLMNCL*INICDN
Trigger: ATTGTCACAGATGTTGATCCAAAGACAGTTCATAAG...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAACCCCTCAGTAGCATCTaGATACAAATCCAAATTAAA +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKPLSSI*IQIQIK
Trigger: TTTAATTTGGATTTGTATCCAGATGCTACTGAGGGG...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CCA 90 bp CTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCAAGAATGTTAACAAATTCCAAGTTAATTaGGTGCAACAGCTGAATATC +
Preference number: 4 (lower is better)
Translates to: LPLVTFLHSITWFTKNVNKFQVN*VQQLNI
Trigger: GATATTCAGCTGTTGCACCCAATTAACTTGGAATTT...GTTAACATTCTTGGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CCA 90 bp AACATGTCATTTCTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCAATAGTTTTAAATTCTaGTCCATCACTGTCTGCCTT +
Preference number: 4 (lower is better)
Translates to: NMSFLPLVTFLHSITWFTNSFKF*SITVCL
Trigger: AAGGCAGACAGTGATGGACCAGAATTTAAAACTATT...GGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAGAAATGACATGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CCA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGAATAGTTTTAAATTCTaGTCCATCACTGTCTGCCTT +
Preference number: 4 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRNSFKF*SITVCL
Trigger: AAGGCAGACAGTGATGGACCAGAATTTAAAACTATT...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CCA 90 bp CTTGACATCCACGACAAAAACTACCAAGTCCTCTCATTAGTGTATAATCATTCTAATAGTTTTAAATTCTaGTCCATCACTGTCTGCCTT +
Preference number: 4 (lower is better)
Translates to: LDIHDKNYQVLSLVYNHSNSFKF*SITVCL
Trigger: AAGGCAGACAGTGATGGACCAGAATTTAAAACTATT...AGAATGATTATACACTAATGAGAGGACTTGGTAGTTTTTGTCGTGGATGTCAAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR CCA 90 bp ACCATAATACACTTTAGAAAACTTGTCTTCAGCACTACTAAAAACCCACTACACTCAAACACATCCTTTTaGGAAATGTTGCTGGATACA +
Preference number: 4 (lower is better)
Translates to: TIIHFRKLVFSTTKNPLHSNTSF*EMLLDT
Trigger: TGTATCCAGCAACATTTCCCAAAAGGATGTGTTTGA...GTGTAGTGGGTTTTTAGTAGTGCTGAAGACAAGTTTTCTAAAGTGTATTATGGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR CCA 90 bp TATGCTTTTCAACAGCAAGTTGACAGAATGAACTGCAAACATTTCCTGTTTTTCTCAAACACATCCTTTTaGGAAATGTTGCTGGATACA +
Preference number: 4 (lower is better)
Translates to: YAFQQQVDRMNCKHFLFFSNTSF*EMLLDT
Trigger: TGTATCCAGCAACATTTCCCAAAAGGATGTGTTTGA...GAAAAACAGGAAATGTTTGCAGTTCATTCTGTCAACTTGCTGTTGAAAAGCATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR CCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAACAGCCTTTTTGTGAATaGACTGCAAATCTACATTCA +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKQPFCE*TANLHS
Trigger: TGAATGTAGATTTGCAGTCCATTCACAAAAAGGCTG...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAATCTTGTTCTTTGAGATaGTCAGGTACACTTGAAACA +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKSCSLR*SGTLET
Trigger: TGTTTCAAGTGTACCTGACCATCTCAAAGAACAAGA...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CCA 90 bp CTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCAAGAATGTTAACGAACTGTTGTTATCTTaGTCATTCTTTCTGTCAATC +
Preference number: 4 (lower is better)
Translates to: LPLVTFLHSITWFTKNVNELLLS*SFFLSI
Trigger: GATTGACAGAAAGAATGACCAAGATAACAACAGTTC...GTTAACATTCTTGGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CCA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGGAACTGTTGTTATCTTaGTCATTCTTTCTGTCAATC +
Preference number: 4 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRELLLS*SFFLSI
Trigger: GATTGACAGAAAGAATGACCAAGATAACAACAGTTC...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CCA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGATCTTCTTTTGTTTTTaGAGACAATGCAGCCATGAT +
Preference number: 4 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRIFFCF*RQCSHD
Trigger: ATCATGGCTGCATTGTCTCCAAAAACAAAAGAAGAT...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CCA 90 bp GTAACAGTATCTGCTTCTGAGCTCAATAAAGGCTTTCATCTATTAAACGCAGAAATCTTCTTTTGTTTTTaGAGACAATGCAGCCATGAT +
Preference number: 4 (lower is better)
Translates to: VTVSASELNKGFHLLNAEIFFCF*RQCSHD
Trigger: ATCATGGCTGCATTGTCTCCAAAAACAAAAGAAGAT...TTCTGCGTTTAATAGATGAAAGCCTTTATTGAGCTCAGAAGCAGATACTGTTAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR CCA 90 bp CTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCAAGAATGTTAACAATAAAATCATCTCCTaGCAGCAAACTTTTATCCTG +
Preference number: 4 (lower is better)
Translates to: LPLVTFLHSITWFTKNVNNKIIS*QQTFIL
Trigger: CAGGATAAAAGTTTGCTGCCAGGAGATGATTTTATT...GTTAACATTCTTGGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CCA 90 bp AACATGTCATTTCTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCATGAATTGCCATTTGTaGCTCAGGAATAAAATCATC +
Preference number: 4 (lower is better)
Translates to: NMSFLPLVTFLHSITWFTMNCHL*LRNKII
Trigger: GATGATTTTATTCCTGAGCCACAAATGGCAATTCAT...GGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAGAAATGACATGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTATCCCTGAAATCAGCTaGATGTTTCACATGAATATC +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFIPEIS*MFHMNI
Trigger: GATATTCATGTGAAACATCCAGCTGATTTCAGGGAT...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAAATCCCTGAAATCAGCTaGATGTTTCACATGAATATC +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKIPEIS*MFHMNI
Trigger: GATATTCATGTGAAACATCCAGCTGATTTCAGGGAT...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CCA 90 bp TATGCTTTTCAACAGCAAGTTGACAGAATGAACTGCAAACATTTCCTGTTTTTCATCCCTGAAATCAGCTaGATGTTTCACATGAATATC +
Preference number: 4 (lower is better)
Translates to: YAFQQQVDRMNCKHFLFFIPEIS*MFHMNI
Trigger: GATATTCATGTGAAACATCCAGCTGATTTCAGGGAT...GAAAAACAGGAAATGTTTGCAGTTCATTCTGTCAACTTGCTGTTGAAAAGCATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR CCA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTACTGGACCAGGCACTaGTTGAAATTTTTAATTGTA +
Preference number: 4 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRYWTRH*LKFLIV
Trigger: TACAATTAAAAATTTCAACCAGTGCCTGGTCCAGTA...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CCA 90 bp CTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCAAGAATGTTAACAAACAACACCAGAACTaGTTATCCCAATATAGGAAA +
Preference number: 4 (lower is better)
Translates to: LPLVTFLHSITWFTKNVNKQHQN*LSQYRK
Trigger: TTTCCTATATTGGGATAACCAGTTCTGGTGTTGTTT...GTTAACATTCTTGGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CCA 90 bp GTAACAGTATCTGCTTCTGAGCTCAATAAAGGCTTTCATCTATTAAACGCAGAAAAACAACACCAGAACTaGTTATCCCAATATAGGAAA +
Preference number: 4 (lower is better)
Translates to: VTVSASELNKGFHLLNAEKQHQN*LSQYRK
Trigger: TTTCCTATATTGGGATAACCAGTTCTGGTGTTGTTT...TTCTGCGTTTAATAGATGAAAGCCTTTATTGAGCTCAGAAGCAGATACTGTTAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTGAGGCGCATTTCCATTaGATCTTTATCAAAATTGAC +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFEAHFH*IFIKID
Trigger: GTCAATTTTGATAAAGATCCAATGGAAATGCGCCTC...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CCA 90 bp CTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCAAGAATGTTAACGCATCAATATCTTGTTaGATTAACTTTGTCCGTCTT +
Preference number: 4 (lower is better)
Translates to: LPLVTFLHSITWFTKNVNASISC*INFVRL
Trigger: AAGACGGACAAAGTTAATCCAACAAGATATTGATGC...GTTAACATTCTTGGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CCA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGGCATCAATATCTTGTTaGATTAACTTTGTCCGTCTT +
Preference number: 4 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRASISC*INFVRL
Trigger: AAGACGGACAAAGTTAATCCAACAAGATATTGATGC...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CCA 90 bp CTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCAAGAATGTTAACTACAAAATCTTCAAATaGACATTGCCAGTCTACACA +
Preference number: 4 (lower is better)
Translates to: LPLVTFLHSITWFTKNVNYKIFK*TLPVYT
Trigger: TGTGTAGACTGGCAATGTCCATTTGAAGATTTTGTA...GTTAACATTCTTGGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CCA 90 bp AACATGTCATTTCTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCTACAAAATCTTCAAATaGACATTGCCAGTCTACACA +
Preference number: 4 (lower is better)
Translates to: NMSFLPLVTFLHSITWFTYKIFK*TLPVYT
Trigger: TGTGTAGACTGGCAATGTCCATTTGAAGATTTTGTA...GGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAGAAATGACATGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR GCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTACAAGAGCTTGTGTTTaGAGCAACAGATTTAAAGAT +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFTRACV*SNRFKD
Trigger: ATCTTTAAATCTGTTGCTGCAAACACAAGCTCTTGT...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR GCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAAGTAAGCTTTGTTAGCTaGACATCCATTCTATCAATT +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKVSFVS*TSILSI
Trigger: AATTGATAGAATGGATGTGCAGCTAACAAAGCTTAC...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR GCA 90 bp ACCATAATACACTTTAGAAAACTTGTCTTCAGCACTACTAAAAACCCACTACACGTAAGCTTTGTTAGCTaGACATCCATTCTATCAATT +
Preference number: 4 (lower is better)
Translates to: TIIHFRKLVFSTTKNPLHVSFVS*TSILSI
Trigger: AATTGATAGAATGGATGTGCAGCTAACAAAGCTTAC...GTGTAGTGGGTTTTTAGTAGTGCTGAAGACAAGTTTTCTAAAGTGTATTATGGT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR GCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTTTTATTCCCTTCAGTTaGATCAATTTGTACCAAGAC +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFFIPFS*INLYQD
Trigger: GTCTTGGTACAAATTGATGCAACTGAAGGGAATAAA...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
34% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAATTAAGTACTGAGGTTTaGTCAGTTCAATGGCAATAT +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKLSTEV*SVQWQY
Trigger: ATATTGCCATTGAACTGACCAAACCTCAGTACTTAA...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTCTTATGAACTGTCTTTaGATCAACATCTGTGACAAT +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFLMNCL*INICDN
Trigger: ATTGTCACAGATGTTGATCCAAAGACAGTTCATAAG...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAAAAATTCCAAGTTAATTaGGTGCAACAGCTGAATATC +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKKFQVN*VQQLNI
Trigger: GATATTCAGCTGTTGCACCCAATTAACTTGGAATTT...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
34% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CCA 90 bp ACCATAATACACTTTAGAAAACTTGTCTTCAGCACTACTAAAAACCCACTACACAAATTCCAAGTTAATTaGGTGCAACAGCTGAATATC +
Preference number: 4 (lower is better)
Translates to: TIIHFRKLVFSTTKNPLHKFQVN*VQQLNI
Trigger: GATATTCAGCTGTTGCACCCAATTAACTTGGAATTT...GTGTAGTGGGTTTTTAGTAGTGCTGAAGACAAGTTTTCTAAAGTGTATTATGGT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR CCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAAGAACTGTTGTTATCTTaGTCATTCTTTCTGTCAATC +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKELLLS*SFFLSI
Trigger: GATTGACAGAAAGAATGACCAAGATAACAACAGTTC...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAATAAAATCATCTCCTaGCAGCAAACTTTTATCCTG +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFNKIIS*QQTFIL
Trigger: CAGGATAAAAGTTTGCTGCCAGGAGATGATTTTATT...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAAAATAAAATCATCTCCTaGCAGCAAACTTTTATCCTG +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKNKIIS*QQTFIL
Trigger: CAGGATAAAAGTTTGCTGCCAGGAGATGATTTTATT...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTATGAATTGCCATTTGTaGCTCAGGAATAAAATCATC +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFMNCHL*LRNKII
Trigger: GATGATTTTATTCCTGAGCCACAAATGGCAATTCAT...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAAATGAATTGCCATTTGTaGCTCAGGAATAAAATCATC +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKMNCHL*LRNKII
Trigger: GATGATTTTATTCCTGAGCCACAAATGGCAATTCAT...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAATACTGGACCAGGCACTaGTTGAAATTTTTAATTGTA +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKYWTRH*LKFLIV
Trigger: TACAATTAAAAATTTCAACCAGTGCCTGGTCCAGTA...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTTCGGTTATAAAAGAATaGTTTGGAAGATCCTTCACA +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFSVIKE*FGRSFT
Trigger: TGTGAAGGATCTTCCAAACCATTCTTTTATAACCGA...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAATCGGTTATAAAAGAATaGTTTGGAAGATCCTTCACA +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKSVIKE*FGRSFT
Trigger: TGTGAAGGATCTTCCAAACCATTCTTTTATAACCGA...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CCA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAAAAACAACACCAGAACTaGTTATCCCAATATAGGAAA +
Preference number: 4 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKKQHQN*LSQYRK
Trigger: TTTCCTATATTGGGATAACCAGTTCTGGTGTTGTTT...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
34% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAACAACACCAGAACTaGTTATCCCAATATAGGAAA +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFKQHQN*LSQYRK
Trigger: TTTCCTATATTGGGATAACCAGTTCTGGTGTTGTTT...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CCA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTGCATCAATATCTTGTTaGATTAACTTTGTCCGTCTT +
Preference number: 4 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFASISC*INFVRL
Trigger: AAGACGGACAAAGTTAATCCAACAAGATATTGATGC...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS TCA 90 bp GCTGAGGCACAAGGAGAGGGAGGAGCCGGAACCGCCCGGCGCAGCTaGGGGCTGCGACCAGCGCTGCAAATGACAGCCCCTCCGGCGCAG +
Preference number: 5 (lower is better)
Translates to: AEAQGEGGAGTARRS*GLRPALQMTAPPAQ
Trigger: CTGCGCCGGAGGGGCTGTCATTTGCAGCGCTGGTCGCAGCCCTCAGCTGCGCCGGGCGGTTCCGGCTCCTCCCTCTCCTTGTGCCTCAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249837.7
CDS GCA 90 bp AAAACTCCTCTGGGCAAGATCTTTCACACTTGTGGCAGCCCTTTCTaGAGCCTGGGCAGTGGCAGCACTCAGAGACTCTTTGGCTGTCTG +
Preference number: 5 (lower is better)
Translates to: KTPLGKIFHTCGSPF*SLGSGSTQRLFGCL
Trigger: CAGACAGCCAAAGAGTCTCTGAGTGCTGCCACTGCCCAGGCTGCAGAAAGGGCTGCCACAAGTGTGAAAGATCTTGCCCAGAGGAGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249837.7
ENST00000395898.3
ENST00000644861.2
ENST00000645819.1
CDS-3UTR CAA 90 bp CACTCTCTCAATCAGTGGCTCCCAGACAGCATGGATCTCATTGTAATAGTGCACCTACGATTCCACCAGTaGGACGGGCCACAGCACCCA +
Preference number: 5 (lower is better)
Translates to: HSLNQWLPDSMDLIVIVHLRFHQ*DGPQHP
Trigger: TGGGTGCTGTGGCCCGTCCAACTGGTGGAATCGTAG...GTGCACTATTACAATGAGATCCATGCTGTCTGGGAGCCACTGATTGAGAGAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR CAA 90 bp TTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGGACTGCTAGCACTCCATCCCTGGAATTaGCACATACCATGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: FLQGSDPFGWWRRSGLLALHPWN*HIPCCC
Trigger: GCAGCAGCATGGTATGTGCAAATTCCAGGGATGGAG...TGCTAGCAGTCCACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CAA 90 bp CCTGAATTGATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATCTACGATTCCACCAGTaGGACGGGCCACAGCACCCA +
Preference number: 5 (lower is better)
Translates to: PELILTGPAPSQNTVSLYLRFHQ*DGPQHP
Trigger: TGGGTGCTGTGGCCCGTCCAACTGGTGGAATCGTAG...ATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATCAATTCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS CCA 90 bp GCTGGATACAGCTTTGACAGCGATACTTCTGGACTCCCCCACAAGTaGTTTCAGCTCGGATTCCTTCTCAGAAGAGGAAGGCTCAGAGAA +
Preference number: 5 (lower is better)
Translates to: AGYSFDSDTSGLPHK*FQLGFLLRRGRLRE
Trigger: TTCTCTGAGCCTTCCTCTTCTGAGAAGGAATCCGAGCTGAAACCACTTGTGGGGGAGTCCAGAAGTATCGCTGTCAAAGCTGTATCCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000249837.7
ENST00000395898.3
ENST00000644861.2
ENST00000645819.1
ENST00000650094.1
CDS-3UTR CAA 90 bp TTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGGACTGCTAGCATTCTACCTTAAGTGCTaGTGCTCCTGGTCGCTGAGA +
Preference number: 5 (lower is better)
Translates to: FLQGSDPFGWWRRSGLLAFYLKC*CSWSLR
Trigger: TCTCAGCGACCAGGAGCACAAGCACTTAAGGTAGAA...TGCTAGCAGTCCACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CAA 90 bp GTCTCGTTGACTGTGCATCCTCAATGGCATTACATGCTCTCTCTGCTGTGGCGGATAGGTTCCCTTGACTaGAAGGTACCATGCTGGCAT +
Preference number: 5 (lower is better)
Translates to: VSLTVHPQWHYMLSLLWRIGSLD*KVPCWH
Trigger: ATGCCAGCATGGTACCTTCAAGTCAAGGGAACCTAT...CCGCCACAGCAGAGAGAGCATGTAATGCCATTGAGGATGCACAGTCAACGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR CAA 90 bp TTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGGACTGCTAGCAGCAGCTCCTTCCTTTTaGGCACCTTCCACAGGTTTT +
Preference number: 5 (lower is better)
Translates to: FLQGSDPFGWWRRSGLLAAAPSF*APSTGF
Trigger: AAAACCTGTGGAAGGTGCCAAAAAGGAAGGAGCTGC...TGCTAGCAGTCCACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CAA 90 bp GCAAAACTCTCTGGCGCCCATCCAGAAATGATACCCAGTGTATCTGGATGTTTGAAGGGTCTGACCCATTaGGGTGGTGGCGTAGAAGTG +
Preference number: 5 (lower is better)
Translates to: AKLSGAHPEMIPSVSGCLKGLTH*GGGVEV
Trigger: CACTTCTACGCCACCACCCAAATGGGTCAGACCCTT...CAAACATCCAGATACACTGGGTATCATTTCTGGATGGGCGCCAGAGAGTTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR CAA 90 bp TTTGAAGTGACGTTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTTCCACAACAGGCACCTaGTGGTACCAAGATGCAGCT +
Preference number: 5 (lower is better)
Translates to: FEVTFLQGSDPFGWWRRSSTTGT*WYQDAA
Trigger: AGCTGCATCTTGGTACCACAAGGTGCCTGTTGTGGA...ACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAACGTCACTTCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CAA 90 bp TTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGGACTGCTAGCATTGCTGGATACAGCTTaGACAGCGATACTTCTGGAC +
Preference number: 5 (lower is better)
Translates to: FLQGSDPFGWWRRSGLLALLDTA*TAILLD
Trigger: GTCCAGAAGTATCGCTGTCAAAGCTGTATCCAGCAA...TGCTAGCAGTCCACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CAA 90 bp TCGTTGACTGTGCATCCTCAATGGCATTACATGCTCTCTCTGCTGTGGCGGTGTTCATCTTTCTCTATCTaGACCTTCCCTGTGGCAGTC +
Preference number: 5 (lower is better)
Translates to: SLTVHPQWHYMLSLLWRCSSFSI*TFPVAV
Trigger: GACTGCCACAGGGAAGGTCAAGATAGAGAAAGATGA...ACACCGCCACAGCAGAGAGAGCATGTAATGCCATTGAGGATGCACAGTCAACGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR CAA 90 bp GTCTCGTTGACTGTGCATCCTCAATGGCATTACATGCTCTCTCTGCTGTGGCGGACTCTCACACAAAGTTaGCCTGACAAACTTTCTGGC +
Preference number: 5 (lower is better)
Translates to: VSLTVHPQWHYMLSLLWRTLTQS*PDKLSG
Trigger: GCCAGAAAGTTTGTCAGGCAAACTTTGTGTGAGAGT...CCGCCACAGCAGAGAGAGCATGTAATGCCATTGAGGATGCACAGTCAACGAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR CAA 90 bp TCGTTGACTGTGCATCCTCAATGGCATTACATGCTCTCTCTGCTGTGGCGGTGTTTGGCACTGTCTTTTTaGTGGAACAGACCCTGTTCC +
Preference number: 5 (lower is better)
Translates to: SLTVHPQWHYMLSLLWRCLALSF*WNRPCS
Trigger: GGAACAGGGTCTGTTCCACAAAAAAGACAGTGCCAA...ACACCGCCACAGCAGAGAGAGCATGTAATGCCATTGAGGATGCACAGTCAACGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR CAA 90 bp TTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGGACTGCTAGCAATGTTGCAATCCAGTTaGGGCGTTTTGAGCTCTGAT +
Preference number: 5 (lower is better)
Translates to: FLQGSDPFGWWRRSGLLAMLQSS*GVLSSD
Trigger: ATCAGAGCTCAAAACGCCCAAACTGGATTGCAACAT...TGCTAGCAGTCCACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CAA 90 bp TTTGAAGTGACGTTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTCAAGATCTTTCACACTaGTGGCAGCCCTTTCTGCAG +
Preference number: 5 (lower is better)
Translates to: FEVTFLQGSDPFGWWRRSQDLSH*WQPFLQ
Trigger: CTGCAGAAAGGGCTGCCACAAGTGTGAAAGATCTTG...ACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAACGTCACTTCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CAA 90 bp TTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGGACTGCTAGCAAAGGCGGAAACTCTTTaGAGCCAAGTCTTTCATGCT +
Preference number: 5 (lower is better)
Translates to: FLQGSDPFGWWRRSGLLAKAETL*SQVFHA
Trigger: AGCATGAAAGACTTGGCTCAAAAGAGTTTCCGCCTT...TGCTAGCAGTCCACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CAA 90 bp CTCTCACACAAAGTTTGCCTGACAAACTTTCTGGCCAAAATGGAAGGCACTCTGCTCCATCCCTGGAATTaGCACATACCATGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: LSHKVCLTNFLAKMEGTLLHPWN*HIPCCC
Trigger: GCAGCAGCATGGTATGTGCAAATTCCAGGGATGGAG...CAGAGTGCCTTCCATTTTGGCCAGAAAGTTTGTCAGGCAAACTTTGTGTGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR CAA 90 bp TCTCTGAGAAAAGGGCAAGCGAGCACTTTCAGATCTCTCACAGAAGCTTCCATCCAGGAGCATCAGCCTTaGTCAGGCTGGCAACAAATA +
Preference number: 5 (lower is better)
Translates to: SLRKGQASTFRSLTEASIQEHQP*SGWQQI
Trigger: TATTTGTTGCCAGCCTGACAAAGGCTGATGCTCCTG...GATGGAAGCTTCTGTGAGAGATCTGAAAGTGCTCGCTTGCCCTTTTCTCAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR CAA 90 bp TTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGGACTGCTAGCAACTCTCACACAAAGTTaGCCTGACAAACTTTCTGGC +
Preference number: 5 (lower is better)
Translates to: FLQGSDPFGWWRRSGLLATLTQS*PDKLSG
Trigger: GCCAGAAAGTTTGTCAGGCAAACTTTGTGTGAGAGT...TGCTAGCAGTCCACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CAA 90 bp TTTGAAGTGACGTTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGCAGCTCCTTCCTTTTaGGCACCTTCCACAGGTTTT +
Preference number: 5 (lower is better)
Translates to: FEVTFLQGSDPFGWWRRSAAPSF*APSTGF
Trigger: AAAACCTGTGGAAGGTGCCAAAAAGGAAGGAGCTGC...ACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAACGTCACTTCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CAA 90 bp TTTGAAGTGACGTTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGGAGGAATCCAGTCCTaGAATCTTGATTTCGGCGAT +
Preference number: 5 (lower is better)
Translates to: FEVTFLQGSDPFGWWRRSGGIQS*NLDFGD
Trigger: ATCGCCGAAATCAAGATTCAAGGACTGGATTCCTCC...ACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAACGTCACTTCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CAA 90 bp TTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGGACTGCTAGCATCTACCACTACTGCATaGGTGGAAATAGAAGACTGT +
Preference number: 5 (lower is better)
Translates to: FLQGSDPFGWWRRSGLLASTTTA*VEIEDC
Trigger: ACAGTCTTCTATTTCCACCAATGCAGTAGTGGTAGA...TGCTAGCAGTCCACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CAA 90 bp GCCTGCAGTGCTTTGGAAACCAAGGCAACATCATCGGTGAAAAGCAAAACTCTCTTGCTGGATACAGCTTaGACAGCGATACTTCTGGAC +
Preference number: 5 (lower is better)
Translates to: ACSALETKATSSVKSKTLLLDTA*TAILLD
Trigger: GTCCAGAAGTATCGCTGTCAAAGCTGTATCCAGCAA...GAGAGTTTTGCTTTTCACCGATGATGTTGCCTTGGTTTCCAAAGCACTGCAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR CAA 90 bp TTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGGACTGCTAGCATCCTTTTGGGAAATGTaGCTGGATACAGCTTTGACA +
Preference number: 5 (lower is better)
Translates to: FLQGSDPFGWWRRSGLLASFWEM*LDTALT
Trigger: TGTCAAAGCTGTATCCAGCAACATTTCCCAAAAGGA...TGCTAGCAGTCCACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CAA 90 bp TTTGAAGTGACGTTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTTCATCTTTCTCTATCTaGACCTTCCCTGTGGCAGTC +
Preference number: 5 (lower is better)
Translates to: FEVTFLQGSDPFGWWRRSSSFSI*TFPVAV
Trigger: GACTGCCACAGGGAAGGTCAAGATAGAGAAAGATGA...ACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAACGTCACTTCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CAA 90 bp TTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGGACTGCTAGCAACTCTGAGATTACAATaGGGCTTCACCTTAATGGGA +
Preference number: 5 (lower is better)
Translates to: FLQGSDPFGWWRRSGLLATLRLQ*GFTLMG
Trigger: TCCCATTAAGGTGAAGCCCAATTGTAATCTCAGAGT...TGCTAGCAGTCCACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CAA 90 bp TTTGAAGTGACGTTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTATAGGTTCCCTTGACTaGAAGGTACCATGCTGGCAT +
Preference number: 5 (lower is better)
Translates to: FEVTFLQGSDPFGWWRRSIGSLD*KVPCWH
Trigger: ATGCCAGCATGGTACCTTCAAGTCAAGGGAACCTAT...ACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAACGTCACTTCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CAA 90 bp CACTCTCTCAATCAGTGGCTCCCAGACAGCATGGATCTCATTGTAATAGTGCACAGGTACTCCATATTGTaGGCAGGACACTTCACACAC +
Preference number: 5 (lower is better)
Translates to: HSLNQWLPDSMDLIVIVHRYSIL*AGHFTH
Trigger: GTGTGTGAAGTGTCCTGCCAACAATATGGAGTACCT...GTGCACTATTACAATGAGATCCATGCTGTCTGGGAGCCACTGATTGAGAGAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR CAA 90 bp GCAAAACTCTCTGGCGCCCATCCAGAAATGATACCCAGTGTATCTGGATGTTTGAAAGTCGAGCCTGTCTaGGCAGCAAGACCATTTCTT +
Preference number: 5 (lower is better)
Translates to: AKLSGAHPEMIPSVSGCLKVEPV*AARPFL
Trigger: AAGAAATGGTCTTGCTGCCAAGACAGGCTCGACTTT...CAAACATCCAGATACACTGGGTATCATTTCTGGATGGGCGCCAGAGAGTTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR CAA 90 bp GATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATATGCCTTATCTGCCTGCAGTGCTTaGGAAACCAAGGCAACATCA +
Preference number: 5 (lower is better)
Translates to: DSHRACSLTEHSVIIYALSACSA*ETKATS
Trigger: TGATGTTGCCTTGGTTTCCAAAGCACTGCAGGCAGA...TAAGGCATATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CAA 90 bp CCTGAATTGATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATTCTGCCTGCAGTGCTTaGGAAACCAAGGCAACATCA +
Preference number: 5 (lower is better)
Translates to: PELILTGPAPSQNTVSLYSACSA*ETKATS
Trigger: TGATGTTGCCTTGGTTTCCAAAGCACTGCAGGCAGA...ATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATCAATTCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CAA 90 bp CCTGAATTGATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATGCAGCTCCTTCCTTTTaGGCACCTTCCACAGGTTTT +
Preference number: 5 (lower is better)
Translates to: PELILTGPAPSQNTVSLYAAPSF*APSTGF
Trigger: AAAACCTGTGGAAGGTGCCAAAAAGGAAGGAGCTGC...ATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATCAATTCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CAA 90 bp GTCTCGTTGACTGTGCATCCTCAATGGCATTACATGCTCTCTCTGCTGTGGCGGATCTTCAAATGGACATaGCCAGTCTACACACATAAG +
Preference number: 5 (lower is better)
Translates to: VSLTVHPQWHYMLSLLWRIFKWT*PVYTHK
Trigger: CTTATGTGTGTAGACTGGCAATGTCCATTTGAAGAT...CCGCCACAGCAGAGAGAGCATGTAATGCCATTGAGGATGCACAGTCAACGAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR CAA 90 bp TTTGAAGTGACGTTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTTTGGCACTGTCTTTTTaGTGGAACAGACCCTGTTCC +
Preference number: 5 (lower is better)
Translates to: FEVTFLQGSDPFGWWRRSLALSF*WNRPCS
Trigger: GGAACAGGGTCTGTTCCACAAAAAAGACAGTGCCAA...ACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAACGTCACTTCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CAA 90 bp GTCTCGTTGACTGTGCATCCTCAATGGCATTACATGCTCTCTCTGCTGTGGCGGGTCTGTCCAATCTTCTaGTTCTGCATAGGTTTTAGT +
Preference number: 5 (lower is better)
Translates to: VSLTVHPQWHYMLSLLWRVCPIF*FCIGFS
Trigger: ACTAAAACCTATGCAGAACAAGAAGATTGGACAGAC...CCGCCACAGCAGAGAGAGCATGTAATGCCATTGAGGATGCACAGTCAACGAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR CAA 90 bp TTTGAAGTGACGTTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTCCAAAATCTGTTCCCTaGATCTCTGGTAAGACATGC +
Preference number: 5 (lower is better)
Translates to: FEVTFLQGSDPFGWWRRSPKSVP*ISGKTC
Trigger: GCATGTCTTACCAGAGATCAAGGGAACAGATTTTGG...ACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAACGTCACTTCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CAA 90 bp TTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGGACTGCTAGCACAAGAACAGAATCAATaGCATATTTCCACCATCGTC +
Preference number: 5 (lower is better)
Translates to: FLQGSDPFGWWRRSGLLAQEQNQ*HISTIV
Trigger: GACGATGGTGGAAATATGCAATTGATTCTGTTCTTG...TGCTAGCAGTCCACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CAA 90 bp TTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGGACTGCTAGCAAGGTTTCCTCTGCTCTaGCAAAAAGTAGTTGTACAT +
Preference number: 5 (lower is better)
Translates to: FLQGSDPFGWWRRSGLLARFPLL*QKVVVH
Trigger: ATGTACAACTACTTTTTGCAAGAGCAGAGGAAACCT...TGCTAGCAGTCCACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CAA 90 bp TTTGAAGTGACGTTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTAGAAGCGACAAGAGCTaGTGTTTGCAGCAACAGATT +
Preference number: 5 (lower is better)
Translates to: FEVTFLQGSDPFGWWRRSRSDKS*CLQQQI
Trigger: AATCTGTTGCTGCAAACACAAGCTCTTGTCGCTTCT...ACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAACGTCACTTCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CAA 90 bp TTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGGACTGCTAGCACAGAAAGCATTCAACTaGGCAAATAGCCTGAAATCA +
Preference number: 5 (lower is better)
Translates to: FLQGSDPFGWWRRSGLLAQKAFN*ANSLKS
Trigger: TGATTTCAGGCTATTTGCCAAGTTGAATGCTTTCTG...TGCTAGCAGTCCACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CAA 90 bp TTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGGACTGCTAGCACTGTCTCTTGTACTCTaGGTTTCACTTTATCCAAGT +
Preference number: 5 (lower is better)
Translates to: FLQGSDPFGWWRRSGLLALSLVL*VSLYPS
Trigger: ACTTGGATAAAGTGAAACCAAGAGTACAAGAGACAG...TGCTAGCAGTCCACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CAA 90 bp TTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGGACTGCTAGCAAATTTCAATGTCATTTaGTGGCAAGCTAGCCTGCAA +
Preference number: 5 (lower is better)
Translates to: FLQGSDPFGWWRRSGLLANFNVI*WQASLQ
Trigger: TTGCAGGCTAGCTTGCCACAAAATGACATTGAAATT...TGCTAGCAGTCCACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CAA 90 bp TTTGAAGTGACGTTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGTTCGAGTTTGGATGTaGACAGAGAAAGGTTGCACT +
Preference number: 5 (lower is better)
Translates to: FEVTFLQGSDPFGWWRRSVRVWM*TEKGCT
Trigger: AGTGCAACCTTTCTCTGTCAACATCCAAACTCGAAC...ACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAACGTCACTTCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CAA 90 bp CACTCTCTCAATCAGTGGCTCCCAGACAGCATGGATCTCATTGTAATAGTGCACGTTCGAGTTTGGATGTaGACAGAGAAAGGTTGCACT +
Preference number: 5 (lower is better)
Translates to: HSLNQWLPDSMDLIVIVHVRVWM*TEKGCT
Trigger: AGTGCAACCTTTCTCTGTCAACATCCAAACTCGAAC...GTGCACTATTACAATGAGATCCATGCTGTCTGGGAGCCACTGATTGAGAGAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR CAA 90 bp TTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGGACTGCTAGCATGGATCCATCTTCTTTaGTTTTTGGAGACAATGCAG +
Preference number: 5 (lower is better)
Translates to: FLQGSDPFGWWRRSGLLAWIHLL*FLETMQ
Trigger: CTGCATTGTCTCCAAAAACAAAAGAAGATGGATCCA...TGCTAGCAGTCCACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CAA 90 bp TTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGGACTGCTAGCATTCAGTTGCATCAATTaGTACCAAGACAGAGTCAGA +
Preference number: 5 (lower is better)
Translates to: FLQGSDPFGWWRRSGLLAFSCIN*YQDRVR
Trigger: TCTGACTCTGTCTTGGTACAAATTGATGCAACTGAA...TGCTAGCAGTCCACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CAA 90 bp CCTGAATTGATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATACCAGGTACTCCATATaGTTGGCAGGACACTTCACA +
Preference number: 5 (lower is better)
Translates to: PELILTGPAPSQNTVSLYTRYSI*LAGHFT
Trigger: TGTGAAGTGTCCTGCCAACAATATGGAGTACCTGGT...ATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATCAATTCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CAA 90 bp GATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATATGCCTTAACCAGGTACTCCATATaGTTGGCAGGACACTTCACA +
Preference number: 5 (lower is better)
Translates to: DSHRACSLTEHSVIIYALTRYSI*LAGHFT
Trigger: TGTGAAGTGTCCTGCCAACAATATGGAGTACCTGGT...TAAGGCATATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CAA 90 bp TTTGAAGTGACGTTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTACTCTCACACAAAGTTaGCCTGACAAACTTTCTGGC +
Preference number: 5 (lower is better)
Translates to: FEVTFLQGSDPFGWWRRSTLTQS*PDKLSG
Trigger: GCCAGAAAGTTTGTCAGGCAAACTTTGTGTGAGAGT...ACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAACGTCACTTCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CAA 90 bp TTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGGACTGCTAGCACTTGTTGGATTAACTTaGTCCGTCTTCTTTCAGCTT +
Preference number: 5 (lower is better)
Translates to: FLQGSDPFGWWRRSGLLALVGLT*SVFFQL
Trigger: AAGCTGAAAGAAGACGGACAAAGTTAATCCAACAAG...TGCTAGCAGTCCACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CAA 90 bp AACATGTCATTTCTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCCTACGATTCCACCAGTaGGACGGGCCACAGCACCCA +
Preference number: 5 (lower is better)
Translates to: NMSFLPLVTFLHSITWFTLRFHQ*DGPQHP
Trigger: TGGGTGCTGTGGCCCGTCCAACTGGTGGAATCGTAG...GGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAGAAATGACATGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CAA 90 bp CTTGACATCCACGACAAAAACTACCAAGTCCTCTCATTAGTGTATAATCATTCTCTACGATTCCACCAGTaGGACGGGCCACAGCACCCA +
Preference number: 5 (lower is better)
Translates to: LDIHDKNYQVLSLVYNHSLRFHQ*DGPQHP
Trigger: TGGGTGCTGTGGCCCGTCCAACTGGTGGAATCGTAG...AGAATGATTATACACTAATGAGAGGACTTGGTAGTTTTTGTCGTGGATGTCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CAA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGCTACGATTCCACCAGTaGGACGGGCCACAGCACCCA +
Preference number: 5 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRLRFHQ*DGPQHP
Trigger: TGGGTGCTGTGGCCCGTCCAACTGGTGGAATCGTAG...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CAA 90 bp TGCCTGACAAACTTTCTGGCCAAAATGGAAGGCACTCTGAAGAAGCAATATAGTTGCCCTCTGAATGCCTaGGAAGGTACTACTGGCCAT +
Preference number: 5 (lower is better)
Translates to: CLTNFLAKMEGTLKKQYSCPLNA*EGTTGH
Trigger: ATGGCCAGTAGTACCTTCCAAGGCATTCAGAGGGCA...ACTATATTGCTTCTTCAGAGTGCCTTCCATTTTGGCCAGAAAGTTTGTCAGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR CAA 90 bp CCTGAATTGATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATTTGGCACTGTCTTTTTaGTGGAACAGACCCTGTTCC +
Preference number: 5 (lower is better)
Translates to: PELILTGPAPSQNTVSLYLALSF*WNRPCS
Trigger: GGAACAGGGTCTGTTCCACAAAAAAGACAGTGCCAA...ATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATCAATTCAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CAA 90 bp CCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCCATAAGGGTCTGACCCATTaGGGTGGTGGCGTAGAAGTG +
Preference number: 5 (lower is better)
Translates to: PLSHINKNRANQACPHLHKGLTH*GGGVEV
Trigger: CACTTCTACGCCACCACCCAAATGGGTCAGACCCTT...ATGGAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CAA 90 bp TTTGAAGTGACGTTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTAAATACTGTCCTGAATaGATTCTCACAGGGCCTGCT +
Preference number: 5 (lower is better)
Translates to: FEVTFLQGSDPFGWWRRSKYCPE*ILTGPA
Trigger: AGCAGGCCCTGTGAGAATCAATTCAGGACAGTATTT...ACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAACGTCACTTCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS GCA 90 bp TCAGGTACACTTGAAACATCAACTTTTCTCACTCTTACAGTCTCCTaGACAGACTGTGTAGGGCTTGGTTGTGAGGAAGCTTCTCCAAGA +
Preference number: 5 (lower is better)
Translates to: SGTLETSTFLTLTVS*TDCVGLGCEEASPR
Trigger: TCTTGGAGAAGCTTCCTCACAACCAAGCCCTACACAGTCTGTGCAGGAGACTGTAAGAGTGAGAAAAGTTGATGTTTCAAGTGTACCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249837.7
ENST00000395898.3
ENST00000644861.2
ENST00000645819.1
CDS-3UTR CAA 90 bp CCTGAATTGATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATATGTTGCAATCCAGTTaGGGCGTTTTGAGCTCTGAT +
Preference number: 5 (lower is better)
Translates to: PELILTGPAPSQNTVSLYMLQSS*GVLSSD
Trigger: ATCAGAGCTCAAAACGCCCAAACTGGATTGCAACAT...ATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATCAATTCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CAA 90 bp TTTGAAGTGACGTTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTAACTTGAGTAGAAGATaGATGAGCTCCTCATTTGGG +
Preference number: 5 (lower is better)
Translates to: FEVTFLQGSDPFGWWRRSNLSRR*MSSSFG
Trigger: CCCAAATGAGGAGCTCATCAATCTTCTACTCAAGTT...ACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAACGTCACTTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CAA 90 bp TTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGGACTGCTAGCATTGATTTCGGCGATATaGTTCTTTTCGTTGCAAACA +
Preference number: 5 (lower is better)
Translates to: FLQGSDPFGWWRRSGLLALISAI*FFSLQT
Trigger: TGTTTGCAACGAAAAGAACAATATCGCCGAAATCAA...TGCTAGCAGTCCACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CAA 90 bp GAACCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCTCCACAACAGGCACCTaGTGGTACCAAGATGCAGCT +
Preference number: 5 (lower is better)
Translates to: EPLSHINKNRANQACPHLSTTGT*WYQDAA
Trigger: AGCTGCATCTTGGTACCACAAGGTGCCTGTTGTGGA...GAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CAA 90 bp CCTGAATTGATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATAAGGCGGAAACTCTTTaGAGCCAAGTCTTTCATGCT +
Preference number: 5 (lower is better)
Translates to: PELILTGPAPSQNTVSLYKAETL*SQVFHA
Trigger: AGCATGAAAGACTTGGCTCAAAAGAGTTTCCGCCTT...ATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATCAATTCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CAA 90 bp TTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGGACTGCTAGCATCTGAGTTCACCAAGTaGGAAACTGTCATTATGAAA +
Preference number: 5 (lower is better)
Translates to: FLQGSDPFGWWRRSGLLASEFTK*ETVIMK
Trigger: TTTCATAATGACAGTTTCCAACTTGGTGAACTCAGA...TGCTAGCAGTCCACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CAA 90 bp TTTGAAGTGACGTTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTCAATCATTCTCGATGTaGCTCTCTCAATTCCTTCTC +
Preference number: 5 (lower is better)
Translates to: FEVTFLQGSDPFGWWRRSQSFSM*LSQFLL
Trigger: GAGAAGGAATTGAGAGAGCAACATCGAGAATGATTG...ACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAACGTCACTTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CAA 90 bp CACTCTCTCAATCAGTGGCTCCCAGACAGCATGGATCTCATTGTAATAGTGCACCAATCATTCTCGATGTaGCTCTCTCAATTCCTTCTC +
Preference number: 5 (lower is better)
Translates to: HSLNQWLPDSMDLIVIVHQSFSM*LSQFLL
Trigger: GAGAAGGAATTGAGAGAGCAACATCGAGAATGATTG...GTGCACTATTACAATGAGATCCATGCTGTCTGGGAGCCACTGATTGAGAGAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR CAA 90 bp TTTGAAGTGACGTTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTATCATCTGTTCGAGTTaGGATGTTGACAGAGAAAGG +
Preference number: 5 (lower is better)
Translates to: FEVTFLQGSDPFGWWRRSIICSS*DVDRER
Trigger: CCTTTCTCTGTCAACATCCAAACTCGAACAGATGAT...ACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAACGTCACTTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CAA 90 bp TTTGAAGTGACGTTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTTTTCCGTTATTTCTGTaGCCGTGTCAACACCAAGAA +
Preference number: 5 (lower is better)
Translates to: FEVTFLQGSDPFGWWRRSFPLFL*PCQHQE
Trigger: TTCTTGGTGTTGACACGGCAACAGAAATAACGGAAA...ACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAACGTCACTTCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CAA 90 bp TTTGAAGTGACGTTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTTGGCCACAGGGATATTaGCAACTTCTGTATATCCAT +
Preference number: 5 (lower is better)
Translates to: FEVTFLQGSDPFGWWRRSWPQGY*QLLYIH
Trigger: ATGGATATACAGAAGTTGCAAATATCCCTGTGGCCA...ACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAACGTCACTTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CAA 90 bp TTTGAAGTGACGTTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTTTGAAACTGCTCATTTaGATGCTAACACCAACCAGG +
Preference number: 5 (lower is better)
Translates to: FEVTFLQGSDPFGWWRRSLKLLI*MLTPTR
Trigger: CCTGGTTGGTGTTAGCATCAAAATGAGCAGTTTCAA...ACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAACGTCACTTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CAA 90 bp TTTGAAGTGACGTTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTACATCAATGAAAGGCTaGGGCTCTGAATCTAAAGCA +
Preference number: 5 (lower is better)
Translates to: FEVTFLQGSDPFGWWRRSTSMKG*GSESKA
Trigger: TGCTTTAGATTCAGAGCCCAAGCCTTTCATTGATGT...ACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAACGTCACTTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CAA 90 bp CCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCCATAAATTCTTCAGGGCCTaGAACAGCACCCTGGAAGGG +
Preference number: 5 (lower is better)
Translates to: PLSHINKNRANQACPHLHKFFRA*NSTLEG
Trigger: CCCTTCCAGGGTGCTGTTCAAGGCCCTGAAGAATTT...ATGGAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CAA 90 bp GAACCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCAAATTCTTCAGGGCCTaGAACAGCACCCTGGAAGGG +
Preference number: 5 (lower is better)
Translates to: EPLSHINKNRANQACPHLKFFRA*NSTLEG
Trigger: CCCTTCCAGGGTGCTGTTCAAGGCCCTGAAGAATTT...GAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CAA 90 bp TTTGAAGTGACGTTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTCACCTTCCACAGGTTTaGTTATTATTCCAGTCACTC +
Preference number: 5 (lower is better)
Translates to: FEVTFLQGSDPFGWWRRSHLPQV*LLFQSL
Trigger: GAGTGACTGGAATAATAACAAAACCTGTGGAAGGTG...ACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAACGTCACTTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CAA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTCTACGATTCCACCAGTaGGACGGGCCACAGCACCCA +
Preference number: 5 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFLRFHQ*DGPQHP
Trigger: TGGGTGCTGTGGCCCGTCCAACTGGTGGAATCGTAG...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CAA 90 bp GAACCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCTGCCCTCTGAATGCCTaGGAAGGTACTACTGGCCAT +
Preference number: 5 (lower is better)
Translates to: EPLSHINKNRANQACPHLCPLNA*EGTTGH
Trigger: ATGGCCAGTAGTACCTTCCAAGGCATTCAGAGGGCA...GAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CAA 90 bp CCTGAATTGATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATGATTCATGTAGAGTTTaGCAGAGGCTGATATTGGCT +
Preference number: 5 (lower is better)
Translates to: PELILTGPAPSQNTVSLYDSCRV*QRLILA
Trigger: AGCCAATATCAGCCTCTGCAAAACTCTACATGAATC...ATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATCAATTCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CAA 90 bp TTTGAAGTGACGTTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTCAAGAACAGAATCAATaGCATATTTCCACCATCGTC +
Preference number: 5 (lower is better)
Translates to: FEVTFLQGSDPFGWWRRSQEQNQ*HISTIV
Trigger: GACGATGGTGGAAATATGCAATTGATTCTGTTCTTG...ACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAACGTCACTTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CAA 90 bp GAACCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCTGGTCGCTGAGATACTaGAGTGCCCAGGCCAATTAT +
Preference number: 5 (lower is better)
Translates to: EPLSHINKNRANQACPHLWSLRY*SAQANY
Trigger: ATAATTGGCCTGGGCACTCAAGTATCTCAGCGACCA...GAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CAA 90 bp CCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCCATTGGTCGCTGAGATACTaGAGTGCCCAGGCCAATTAT +
Preference number: 5 (lower is better)
Translates to: PLSHINKNRANQACPHLHWSLRY*SAQANY
Trigger: ATAATTGGCCTGGGCACTCAAGTATCTCAGCGACCA...ATGGAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CAA 90 bp GAACCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCTTCTACCTTAAGTGCTaGTGCTCCTGGTCGCTGAGA +
Preference number: 5 (lower is better)
Translates to: EPLSHINKNRANQACPHLFYLKC*CSWSLR
Trigger: TCTCAGCGACCAGGAGCACAAGCACTTAAGGTAGAA...GAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CAA 90 bp GATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATATGCCTTAAACTTGAGTAGAAGATaGATGAGCTCCTCATTTGGG +
Preference number: 5 (lower is better)
Translates to: DSHRACSLTEHSVIIYALNLSRR*MSSSFG
Trigger: CCCAAATGAGGAGCTCATCAATCTTCTACTCAAGTT...TAAGGCATATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CAA 90 bp GATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATATGCCTTAAGCACACCATCCACTTaGGACATGTCAGTATACAAA +
Preference number: 5 (lower is better)
Translates to: DSHRACSLTEHSVIIYALSTPST*DMSVYK
Trigger: TTTGTATACTGACATGTCCAAAGTGGATGGTGTGCT...TAAGGCATATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CAA 90 bp GAACCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCCAAGATCTTTCACACTaGTGGCAGCCCTTTCTGCAG +
Preference number: 5 (lower is better)
Translates to: EPLSHINKNRANQACPHLQDLSH*WQPFLQ
Trigger: CTGCAGAAAGGGCTGCCACAAGTGTGAAAGATCTTG...GAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CAA 90 bp TTTGAAGTGACGTTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTCATCACTGTCTGCCTTaGTCAGTAACATTTTCAGAA +
Preference number: 5 (lower is better)
Translates to: FEVTFLQGSDPFGWWRRSHHCLP*SVTFSE
Trigger: TTCTGAAAATGTTACTGACAAAGGCAGACAGTGATG...ACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAACGTCACTTCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CAA 90 bp CACTCTCTCAATCAGTGGCTCCCAGACAGCATGGATCTCATTGTAATAGTGCACATCAAACACATCCTTTaGGGAAATGTTGCTGGATAC +
Preference number: 5 (lower is better)
Translates to: HSLNQWLPDSMDLIVIVHIKHIL*GNVAGY
Trigger: GTATCCAGCAACATTTCCCAAAAGGATGTGTTTGAT...GTGCACTATTACAATGAGATCCATGCTGTCTGGGAGCCACTGATTGAGAGAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR CAA 90 bp TTTGAAGTGACGTTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGCAGTTTGGAAATTGTaGAGGAAGTTCAAAAGAGAC +
Preference number: 5 (lower is better)
Translates to: FEVTFLQGSDPFGWWRRSAVWKL*RKFKRD
Trigger: GTCTCTTTTGAACTTCCTCAACAATTTCCAAACTGC...ACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAACGTCACTTCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CAA 90 bp GAACCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCCAGGAGCATCAGCCTTaGTCAGGCTGGCAACAAATA +
Preference number: 5 (lower is better)
Translates to: EPLSHINKNRANQACPHLQEHQP*SGWQQI
Trigger: TATTTGTTGCCAGCCTGACAAAGGCTGATGCTCCTG...GAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CAA 90 bp CTCTCACACAAAGTTTGCCTGACAAACTTTCTGGCCAAAATGGAAGGCACTCTGACTCTGAGATTACAATaGGGCTTCACCTTAATGGGA +
Preference number: 5 (lower is better)
Translates to: LSHKVCLTNFLAKMEGTLTLRLQ*GFTLMG
Trigger: TCCCATTAAGGTGAAGCCCAATTGTAATCTCAGAGT...CAGAGTGCCTTCCATTTTGGCCAGAAAGTTTGTCAGGCAAACTTTGTGTGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR CAA 90 bp CCTGAATTGATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATATGGAGAAATGGTTTTaGATCTGTAGAGGAGAGCGA +
Preference number: 5 (lower is better)
Translates to: PELILTGPAPSQNTVSLYMEKWF*ICRGER
Trigger: TCGCTCTCCTCTACAGATCAAAAACCATTTCTCCAT...ATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATCAATTCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CAA 90 bp TCTCTGAGAAAAGGGCAAGCGAGCACTTTCAGATCTCTCACAGAAGCTTCCATCTGGACCAGGCACTGGTaGAAATTTTTAATTGTACCT +
Preference number: 5 (lower is better)
Translates to: SLRKGQASTFRSLTEASIWTRHW*KFLIVP
Trigger: AGGTACAATTAAAAATTTCAACCAGTGCCTGGTCCA...GATGGAAGCTTCTGTGAGAGATCTGAAAGTGCTCGCTTGCCCTTTTCTCAGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR CAA 90 bp TGCCTGACAAACTTTCTGGCCAAAATGGAAGGCACTCTGAAGAAGCAATATAGTACCAGGTACTCCATATaGTTGGCAGGACACTTCACA +
Preference number: 5 (lower is better)
Translates to: CLTNFLAKMEGTLKKQYSTRYSI*LAGHFT
Trigger: TGTGAAGTGTCCTGCCAACAATATGGAGTACCTGGT...ACTATATTGCTTCTTCAGAGTGCCTTCCATTTTGGCCAGAAAGTTTGTCAGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR CAA 90 bp TCTCTGAGAAAAGGGCAAGCGAGCACTTTCAGATCTCTCACAGAAGCTTCCATCAGTGTATCTGGATGTTaGCATCATATGGAAACTGTC +
Preference number: 5 (lower is better)
Translates to: SLRKGQASTFRSLTEASISVSGC*HHMETV
Trigger: GACAGTTTCCATATGATGCAAACATCCAGATACACT...GATGGAAGCTTCTGTGAGAGATCTGAAAGTGCTCGCTTGCCCTTTTCTCAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR CAA 90 bp GATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATATGCCTTAACATCAATGAAAGGCTaGGGCTCTGAATCTAAAGCA +
Preference number: 5 (lower is better)
Translates to: DSHRACSLTEHSVIIYALTSMKG*GSESKA
Trigger: TGCTTTAGATTCAGAGCCCAAGCCTTTCATTGATGT...TAAGGCATATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CAA 90 bp GCAAAACTCTCTGGCGCCCATCCAGAAATGATACCCAGTGTATCTGGATGTTTGCTTGTTGGATTAACTTaGTCCGTCTTCTTTCAGCTT +
Preference number: 5 (lower is better)
Translates to: AKLSGAHPEMIPSVSGCLLVGLT*SVFFQL
Trigger: AAGCTGAAAGAAGACGGACAAAGTTAATCCAACAAG...CAAACATCCAGATACACTGGGTATCATTTCTGGATGGGCGCCAGAGAGTTTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR CAA 90 bp AATACAAAATCTTCAAATGGACATTGCCAGTCTACACACATAAGGCCCAGGATTAAATTCTTCAGGGCCTaGAACAGCACCCTGGAAGGG +
Preference number: 5 (lower is better)
Translates to: NTKSSNGHCQSTHIRPRIKFFRA*NSTLEG
Trigger: CCCTTCCAGGGTGCTGTTCAAGGCCCTGAAGAATTT...AATCCTGGGCCTTATGTGTGTAGACTGGCAATGTCCATTTGAAGATTTTGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR CAA 90 bp CCTGAATTGATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATATAAGGATTGTCTTCTaGCTTCCAGGAATAGCACAG +
Preference number: 5 (lower is better)
Translates to: PELILTGPAPSQNTVSLYIRIVF*LPGIAQ
Trigger: CTGTGCTATTCCTGGAAGCAAGAAGACAATCCTTAT...ATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATCAATTCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CAA 90 bp GATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATATGCCTTATTGCAGAGGCTGATATaGGCTGGAAAATGTATTGAT +
Preference number: 5 (lower is better)
Translates to: DSHRACSLTEHSVIIYALLQRLI*AGKCID
Trigger: ATCAATACATTTTCCAGCCAATATCAGCCTCTGCAA...TAAGGCATATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CAA 90 bp TTTGAAGTGACGTTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTTTTTGTATTTCTATGTaGCAATCCAGTTTGGGCGTT +
Preference number: 5 (lower is better)
Translates to: FEVTFLQGSDPFGWWRRSFCISM*QSSLGV
Trigger: AACGCCCAAACTGGATTGCAACATAGAAATACAAAA...ACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAACGTCACTTCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CAA 90 bp TTTGAAGTGACGTTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTTTGATTTCGGCGATATaGTTCTTTTCGTTGCAAACA +
Preference number: 5 (lower is better)
Translates to: FEVTFLQGSDPFGWWRRSLISAI*FFSLQT
Trigger: TGTTTGCAACGAAAAGAACAATATCGCCGAAATCAA...ACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAACGTCACTTCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CAA 90 bp CCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCCATGGAGGAATCCAGTCCTaGAATCTTGATTTCGGCGAT +
Preference number: 5 (lower is better)
Translates to: PLSHINKNRANQACPHLHGGIQS*NLDFGD
Trigger: ATCGCCGAAATCAAGATTCAAGGACTGGATTCCTCC...ATGGAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CAA 90 bp CTTGACATCCACGACAAAAACTACCAAGTCCTCTCATTAGTGTATAATCATTCTTCCACAACAGGCACCTaGTGGTACCAAGATGCAGCT +
Preference number: 5 (lower is better)
Translates to: LDIHDKNYQVLSLVYNHSSTTGT*WYQDAA
Trigger: AGCTGCATCTTGGTACCACAAGGTGCCTGTTGTGGA...AGAATGATTATACACTAATGAGAGGACTTGGTAGTTTTTGTCGTGGATGTCAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR CAA 90 bp GATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATATGCCTTACATCACTGTCTGCCTTaGTCAGTAACATTTTCAGAA +
Preference number: 5 (lower is better)
Translates to: DSHRACSLTEHSVIIYALHHCLP*SVTFSE
Trigger: TTCTGAAAATGTTACTGACAAAGGCAGACAGTGATG...TAAGGCATATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CAA 90 bp GATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATATGCCTTAATCAAACACATCCTTTaGGGAAATGTTGCTGGATAC +
Preference number: 5 (lower is better)
Translates to: DSHRACSLTEHSVIIYALIKHIL*GNVAGY
Trigger: GTATCCAGCAACATTTCCCAAAAGGATGTGTTTGAT...TAAGGCATATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CAA 90 bp CCTGAATTGATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATATCAAACACATCCTTTaGGGAAATGTTGCTGGATAC +
Preference number: 5 (lower is better)
Translates to: PELILTGPAPSQNTVSLYIKHIL*GNVAGY
Trigger: GTATCCAGCAACATTTCCCAAAAGGATGTGTTTGAT...ATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATCAATTCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CAA 90 bp AACATGTCATTTCTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCCTCCATCCCTGGAATTaGCACATACCATGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: NMSFLPLVTFLHSITWFTLHPWN*HIPCCC
Trigger: GCAGCAGCATGGTATGTGCAAATTCCAGGGATGGAG...GGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAGAAATGACATGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CAA 90 bp CCTGAATTGATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATGATGGTCAGGTACACTaGAAACATCAACTTTTCTCA +
Preference number: 5 (lower is better)
Translates to: PELILTGPAPSQNTVSLYDGQVH*KHQLFS
Trigger: TGAGAAAAGTTGATGTTTCAAGTGTACCTGACCATC...ATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATCAATTCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CAA 90 bp GCCTGCAGTGCTTTGGAAACCAAGGCAACATCATCGGTGAAAAGCAAAACTCTCAAAGTGAAAGTCAAATaGGAGACTGACAATCTGGTT +
Preference number: 5 (lower is better)
Translates to: ACSALETKATSSVKSKTLKVKVK*ETDNLV
Trigger: AACCAGATTGTCAGTCTCCAATTTGACTTTCACTTT...GAGAGTTTTGCTTTTCACCGATGATGTTGCCTTGGTTTCCAAAGCACTGCAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR CAA 90 bp TTTGAAGTGACGTTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTTCTGAGTTCACCAAGTaGGAAACTGTCATTATGAAA +
Preference number: 5 (lower is better)
Translates to: FEVTFLQGSDPFGWWRRSSEFTK*ETVIMK
Trigger: TTTCATAATGACAGTTTCCAACTTGGTGAACTCAGA...ACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAACGTCACTTCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CAA 90 bp GAACCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCTCATCTTTCTCTATCTaGACCTTCCCTGTGGCAGTC +
Preference number: 5 (lower is better)
Translates to: EPLSHINKNRANQACPHLSSFSI*TFPVAV
Trigger: GACTGCCACAGGGAAGGTCAAGATAGAGAAAGATGA...GAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CAA 90 bp CTCTCACACAAAGTTTGCCTGACAAACTTTCTGGCCAAAATGGAAGGCACTCTGTGGATCCATCTTCTTTaGTTTTTGGAGACAATGCAG +
Preference number: 5 (lower is better)
Translates to: LSHKVCLTNFLAKMEGTLWIHLL*FLETMQ
Trigger: CTGCATTGTCTCCAAAAACAAAAGAAGATGGATCCA...CAGAGTGCCTTCCATTTTGGCCAGAAAGTTTGTCAGGCAAACTTTGTGTGAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR CAA 90 bp TTTGAAGTGACGTTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTGAATGTTCAATGCCTTaGAAGCTTTCCGTTATTTCT +
Preference number: 5 (lower is better)
Translates to: FEVTFLQGSDPFGWWRRSECSMP*KLSVIS
Trigger: AGAAATAACGGAAAGCTTCAAAGGCATTGAACATTC...ACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAACGTCACTTCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CAA 90 bp CCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCCATATAGGTTCCCTTGACTaGAAGGTACCATGCTGGCAT +
Preference number: 5 (lower is better)
Translates to: PLSHINKNRANQACPHLHIGSLD*KVPCWH
Trigger: ATGCCAGCATGGTACCTTCAAGTCAAGGGAACCTAT...ATGGAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CAA 90 bp GATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATATGCCTTATTCAGTTGCATCAATTaGTACCAAGACAGAGTCAGA +
Preference number: 5 (lower is better)
Translates to: DSHRACSLTEHSVIIYALFSCIN*YQDRVR
Trigger: TCTGACTCTGTCTTGGTACAAATTGATGCAACTGAA...TAAGGCATATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CAA 90 bp TTTGAAGTGACGTTTCTTCAAGGGTCTGACCCATTTGGGTGGTGGCGTAGAAGTCTTTATTCCCTTCAGTaGCATCAATTTGTACCAAGA +
Preference number: 5 (lower is better)
Translates to: FEVTFLQGSDPFGWWRRSLYSLQ*HQFVPR
Trigger: TCTTGGTACAAATTGATGCAACTGAAGGGAATAAAG...ACTTCTACGCCACCACCCAAATGGGTCAGACCCTTGAAGAAACGTCACTTCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CAA 90 bp GAACCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCAGGTACTCCATATTGTaGGCAGGACACTTCACACAC +
Preference number: 5 (lower is better)
Translates to: EPLSHINKNRANQACPHLRYSIL*AGHFTH
Trigger: GTGTGTGAAGTGTCCTGCCAACAATATGGAGTACCT...GAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CAA 90 bp CCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCCATAAAGTCGAGCCTGTCTaGGCAGCAAGACCATTTCTT +
Preference number: 5 (lower is better)
Translates to: PLSHINKNRANQACPHLHKVEPV*AARPFL
Trigger: AAGAAATGGTCTTGCTGCCAAGACAGGCTCGACTTT...ATGGAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CAA 90 bp CCTGAATTGATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATAGTGTATCTGGATGTTaGCATCATATGGAAACTGTC +
Preference number: 5 (lower is better)
Translates to: PELILTGPAPSQNTVSLYSVSGC*HHMETV
Trigger: GACAGTTTCCATATGATGCAAACATCCAGATACACT...ATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATCAATTCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CAA 90 bp GATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATATGCCTTAATACAACAGGGAACATaGCACCTGGTAACTGATTAT +
Preference number: 5 (lower is better)
Translates to: DSHRACSLTEHSVIIYALIQQGT*HLVTDY
Trigger: ATAATCAGTTACCAGGTGCAATGTTCCCTGTTGTAT...TAAGGCATATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CAA 90 bp CCTGAATTGATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATCTTGTTGGATTAACTTaGTCCGTCTTCTTTCAGCTT +
Preference number: 5 (lower is better)
Translates to: PELILTGPAPSQNTVSLYLVGLT*SVFFQL
Trigger: AAGCTGAAAGAAGACGGACAAAGTTAATCCAACAAG...ATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATCAATTCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CAA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGAAATTCTTCAGGGCCTaGAACAGCACCCTGGAAGGG +
Preference number: 5 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRKFFRA*NSTLEG
Trigger: CCCTTCCAGGGTGCTGTTCAAGGCCCTGAAGAATTT...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CAA 90 bp AACATGTCATTTCTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCTGCCCTCTGAATGCCTaGGAAGGTACTACTGGCCAT +
Preference number: 5 (lower is better)
Translates to: NMSFLPLVTFLHSITWFTCPLNA*EGTTGH
Trigger: ATGGCCAGTAGTACCTTCCAAGGCATTCAGAGGGCA...GGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAGAAATGACATGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CAA 90 bp CCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCCATCCAAAATCTGTTCCCTaGATCTCTGGTAAGACATGC +
Preference number: 5 (lower is better)
Translates to: PLSHINKNRANQACPHLHPKSVP*ISGKTC
Trigger: GCATGTCTTACCAGAGATCAAGGGAACAGATTTTGG...ATGGAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CAA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGCAAGATCTTTCACACTaGTGGCAGCCCTTTCTGCAG +
Preference number: 5 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRQDLSH*WQPFLQ
Trigger: CTGCAGAAAGGGCTGCCACAAGTGTGAAAGATCTTG...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CAA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTTCCACAACAGGCACCTaGTGGTACCAAGATGCAGCT +
Preference number: 5 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFSTTGT*WYQDAA
Trigger: AGCTGCATCTTGGTACCACAAGGTGCCTGTTGTGGA...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CAA 90 bp TGCCTGACAAACTTTCTGGCCAAAATGGAAGGCACTCTGAAGAAGCAATATAGTTCCTTTTGGGAAATGTaGCTGGATACAGCTTTGACA +
Preference number: 5 (lower is better)
Translates to: CLTNFLAKMEGTLKKQYSSFWEM*LDTALT
Trigger: TGTCAAAGCTGTATCCAGCAACATTTCCCAAAAGGA...ACTATATTGCTTCTTCAGAGTGCCTTCCATTTTGGCCAGAAAGTTTGTCAGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR CAA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTCTCCATCCCTGGAATTaGCACATACCATGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFLHPWN*HIPCCC
Trigger: GCAGCAGCATGGTATGTGCAAATTCCAGGGATGGAG...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CAA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGCAGGAGCATCAGCCTTaGTCAGGCTGGCAACAAATA +
Preference number: 5 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRQEHQP*SGWQQI
Trigger: TATTTGTTGCCAGCCTGACAAAGGCTGATGCTCCTG...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CAA 90 bp AACATGTCATTTCTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCCAGGAGCATCAGCCTTaGTCAGGCTGGCAACAAATA +
Preference number: 5 (lower is better)
Translates to: NMSFLPLVTFLHSITWFTQEHQP*SGWQQI
Trigger: TATTTGTTGCCAGCCTGACAAAGGCTGATGCTCCTG...GGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAGAAATGACATGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CAA 90 bp GAACCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCGTTCGAGTTTGGATGTaGACAGAGAAAGGTTGCACT +
Preference number: 5 (lower is better)
Translates to: EPLSHINKNRANQACPHLVRVWM*TEKGCT
Trigger: AGTGCAACCTTTCTCTGTCAACATCCAAACTCGAAC...GAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CAA 90 bp CCTGAATTGATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATGAATGTTCAATGCCTTaGAAGCTTTCCGTTATTTCT +
Preference number: 5 (lower is better)
Translates to: PELILTGPAPSQNTVSLYECSMP*KLSVIS
Trigger: AGAAATAACGGAAAGCTTCAAAGGCATTGAACATTC...ATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATCAATTCAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CAA 90 bp CTTCCATCATCTGTTCGAGTTTGGATGTTGACAGAGAAAGGTTGCACTGAAACGTTCAGTTGCATCAATTaGTACCAAGACAGAGTCAGA +
Preference number: 5 (lower is better)
Translates to: LPSSVRVWMLTEKGCTETFSCIN*YQDRVR
Trigger: TCTGACTCTGTCTTGGTACAAATTGATGCAACTGAA...CGTTTCAGTGCAACCTTTCTCTGTCAACATCCAAACTCGAACAGATGATGGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR CAA 90 bp CCTGAATTGATTCTCACAGGGCCTGCTCCCTCACAGAACACAGTGTCATTATATCTTTATTCCCTTCAGTaGCATCAATTTGTACCAAGA +
Preference number: 5 (lower is better)
Translates to: PELILTGPAPSQNTVSLYLYSLQ*HQFVPR
Trigger: TCTTGGTACAAATTGATGCAACTGAAGGGAATAAAG...ATATAATGACACTGTGTTCTGTGAGGGAGCAGGCCCTGTGAGAATCAATTCAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CAA 90 bp CTTGACATCCACGACAAAAACTACCAAGTCCTCTCATTAGTGTATAATCATTCTTCTGCCTGCAGTGCTTaGGAAACCAAGGCAACATCA +
Preference number: 5 (lower is better)
Translates to: LDIHDKNYQVLSLVYNHSSACSA*ETKATS
Trigger: TGATGTTGCCTTGGTTTCCAAAGCACTGCAGGCAGA...AGAATGATTATACACTAATGAGAGGACTTGGTAGTTTTTGTCGTGGATGTCAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CAA 90 bp AACATGTCATTTCTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCTCTGCCTGCAGTGCTTaGGAAACCAAGGCAACATCA +
Preference number: 5 (lower is better)
Translates to: NMSFLPLVTFLHSITWFTSACSA*ETKATS
Trigger: TGATGTTGCCTTGGTTTCCAAAGCACTGCAGGCAGA...GGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAGAAATGACATGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CAA 90 bp ACCATAATACACTTTAGAAAACTTGTCTTCAGCACTACTAAAAACCCACTACACAAATTCTTCAGGGCCTaGAACAGCACCCTGGAAGGG +
Preference number: 5 (lower is better)
Translates to: TIIHFRKLVFSTTKNPLHKFFRA*NSTLEG
Trigger: CCCTTCCAGGGTGCTGTTCAAGGCCCTGAAGAATTT...GTGTAGTGGGTTTTTAGTAGTGCTGAAGACAAGTTTTCTAAAGTGTATTATGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR CAA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAAAAATTCTTCAGGGCCTaGAACAGCACCCTGGAAGGG +
Preference number: 5 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKKFFRA*NSTLEG
Trigger: CCCTTCCAGGGTGCTGTTCAAGGCCCTGAAGAATTT...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CAA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGGCAGCTCCTTCCTTTTaGGCACCTTCCACAGGTTTT +
Preference number: 5 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRAAPSF*APSTGF
Trigger: AAAACCTGTGGAAGGTGCCAAAAAGGAAGGAGCTGC...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CAA 90 bp CTTGACATCCACGACAAAAACTACCAAGTCCTCTCATTAGTGTATAATCATTCTGCAGCTCCTTCCTTTTaGGCACCTTCCACAGGTTTT +
Preference number: 5 (lower is better)
Translates to: LDIHDKNYQVLSLVYNHSAAPSF*APSTGF
Trigger: AAAACCTGTGGAAGGTGCCAAAAAGGAAGGAGCTGC...AGAATGATTATACACTAATGAGAGGACTTGGTAGTTTTTGTCGTGGATGTCAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CAA 90 bp GTAACAGTATCTGCTTCTGAGCTCAATAAAGGCTTTCATCTATTAAACGCAGAAGCAGCTCCTTCCTTTTaGGCACCTTCCACAGGTTTT +
Preference number: 5 (lower is better)
Translates to: VTVSASELNKGFHLLNAEAAPSF*APSTGF
Trigger: AAAACCTGTGGAAGGTGCCAAAAAGGAAGGAGCTGC...TTCTGCGTTTAATAGATGAAAGCCTTTATTGAGCTCAGAAGCAGATACTGTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CAA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAATGCCCTCTGAATGCCTaGGAAGGTACTACTGGCCAT +
Preference number: 5 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKCPLNA*EGTTGH
Trigger: ATGGCCAGTAGTACCTTCCAAGGCATTCAGAGGGCA...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CAA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTTGCCCTCTGAATGCCTaGGAAGGTACTACTGGCCAT +
Preference number: 5 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFCPLNA*EGTTGH
Trigger: ATGGCCAGTAGTACCTTCCAAGGCATTCAGAGGGCA...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CAA 90 bp CTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCAAGAATGTTAACTTTGCTGCTGTCTCGTaGACTGTGCATCCTCAATGG +
Preference number: 5 (lower is better)
Translates to: LPLVTFLHSITWFTKNVNFAAVS*TVHPQW
Trigger: CCATTGAGGATGCACAGTCAACGAGACAGCAGCAAA...GTTAACATTCTTGGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CAA 90 bp AACATGTCATTTCTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCTTTGCTGCTGTCTCGTaGACTGTGCATCCTCAATGG +
Preference number: 5 (lower is better)
Translates to: NMSFLPLVTFLHSITWFTFAAVS*TVHPQW
Trigger: CCATTGAGGATGCACAGTCAACGAGACAGCAGCAAA...GGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAGAAATGACATGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS GCA 90 bp GATGTAGTGTCACCAATTGAAGCCACAAGTGATGGCACAATATCCTaGTGTCTCAAACCTGTTATATACCAGTGTTCTAATTTCGCTTCT +
Preference number: 5 (lower is better)
Translates to: DVVSPIEATSDGTIS*CLKPVIYQCSNFAS
Trigger: AGAAGCGAAATTAGAACACTGGTATATAACAGGTTTGAGACAGCAGGATATTGTGCCATCACTTGTGGCTTCAATTGGTGACACTACATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000249837.7
ENST00000395898.3
ENST00000561258.1
ENST00000644861.2
ENST00000645819.1
CDS-3UTR CAA 90 bp GAACCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCGATTCATGTAGAGTTTaGCAGAGGCTGATATTGGCT +
Preference number: 5 (lower is better)
Translates to: EPLSHINKNRANQACPHLDSCRV*QRLILA
Trigger: AGCCAATATCAGCCTCTGCAAAACTCTACATGAATC...GAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGGTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CAA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAATGGTCGCTGAGATACTaGAGTGCCCAGGCCAATTAT +
Preference number: 5 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKWSLRY*SAQANY
Trigger: ATAATTGGCCTGGGCACTCAAGTATCTCAGCGACCA...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CAA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTTGGTCGCTGAGATACTaGAGTGCCCAGGCCAATTAT +
Preference number: 5 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFWSLRY*SAQANY
Trigger: ATAATTGGCCTGGGCACTCAAGTATCTCAGCGACCA...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CAA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAATTCTACCTTAAGTGCTaGTGCTCCTGGTCGCTGAGA +
Preference number: 5 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKFYLKC*CSWSLR
Trigger: TCTCAGCGACCAGGAGCACAAGCACTTAAGGTAGAA...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CAA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTTTCTACCTTAAGTGCTaGTGCTCCTGGTCGCTGAGA +
Preference number: 5 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFFYLKC*CSWSLR
Trigger: TCTCAGCGACCAGGAGCACAAGCACTTAAGGTAGAA...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CAA 90 bp GAACCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCAGCACACCATCCACTTaGGACATGTCAGTATACAAA +
Preference number: 5 (lower is better)
Translates to: EPLSHINKNRANQACPHLSTPST*DMSVYK
Trigger: TTTGTATACTGACATGTCCAAAGTGGATGGTGTGCT...GAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGGTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CAA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTCAAGATCTTTCACACTaGTGGCAGCCCTTTCTGCAG +
Preference number: 5 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFQDLSH*WQPFLQ
Trigger: CTGCAGAAAGGGCTGCCACAAGTGTGAAAGATCTTG...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CAA 90 bp GAACCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCTCTACCACTACTGCATaGGTGGAAATAGAAGACTGT +
Preference number: 5 (lower is better)
Translates to: EPLSHINKNRANQACPHLSTTTA*VEIEDC
Trigger: ACAGTCTTCTATTTCCACCAATGCAGTAGTGGTAGA...GAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGGTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CAA 90 bp CTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCAAGAATGTTAACTTGCTGGATACAGCTTaGACAGCGATACTTCTGGAC +
Preference number: 5 (lower is better)
Translates to: LPLVTFLHSITWFTKNVNLLDTA*TAILLD
Trigger: GTCCAGAAGTATCGCTGTCAAAGCTGTATCCAGCAA...GTTAACATTCTTGGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CAA 90 bp GAACCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCCAATCATTCTCGATGTaGCTCTCTCAATTCCTTCTC +
Preference number: 5 (lower is better)
Translates to: EPLSHINKNRANQACPHLQSFSM*LSQFLL
Trigger: GAGAAGGAATTGAGAGAGCAACATCGAGAATGATTG...GAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGGTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CAA 90 bp TGCCTGACAAACTTTCTGGCCAAAATGGAAGGCACTCTGAAGAAGCAATATAGTGCACATACATACAGCTaGTCAAGAACAGCATCAATT +
Preference number: 5 (lower is better)
Translates to: CLTNFLAKMEGTLKKQYSAHTYS*SRTASI
Trigger: AATTGATGCTGTTCTTGACAAGCTGTATGTATGTGC...ACTATATTGCTTCTTCAGAGTGCCTTCCATTTTGGCCAGAAAGTTTGTCAGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR CAA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTCATCTTTCTCTATCTaGACCTTCCCTGTGGCAGTC +
Preference number: 5 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRSSFSI*TFPVAV
Trigger: GACTGCCACAGGGAAGGTCAAGATAGAGAAAGATGA...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CAA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTCAGGAGCATCAGCCTTaGTCAGGCTGGCAACAAATA +
Preference number: 5 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFQEHQP*SGWQQI
Trigger: TATTTGTTGCCAGCCTGACAAAGGCTGATGCTCCTG...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CAA 90 bp GAACCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCTTTCCGTTATTTCTGTaGCCGTGTCAACACCAAGAA +
Preference number: 5 (lower is better)
Translates to: EPLSHINKNRANQACPHLFPLFL*PCQHQE
Trigger: TTCTTGGTGTTGACACGGCAACAGAAATAACGGAAA...GAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGGTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CAA 90 bp ACTGTACTCATTAAATCTTGTGATGACACTCACATCAATGAAAGGCTTGGGCTCTTTCCGTTATTTCTGTaGCCGTGTCAACACCAAGAA +
Preference number: 5 (lower is better)
Translates to: TVLIKSCDDTHINERLGLFPLFL*PCQHQE
Trigger: TTCTTGGTGTTGACACGGCAACAGAAATAACGGAAA...GAGCCCAAGCCTTTCATTGATGTGAGTGTCATCACAAGATTTAATGAGTACAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR CAA 90 bp CTTCCATCATCTGTTCGAGTTTGGATGTTGACAGAGAAAGGTTGCACTGAAACGGAATGTTCAATGCCTTaGAAGCTTTCCGTTATTTCT +
Preference number: 5 (lower is better)
Translates to: LPSSVRVWMLTEKGCTETECSMP*KLSVIS
Trigger: AGAAATAACGGAAAGCTTCAAAGGCATTGAACATTC...CGTTTCAGTGCAACCTTTCTCTGTCAACATCCAAACTCGAACAGATGATGGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR CAA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGATAGGTTCCCTTGACTaGAAGGTACCATGCTGGCAT +
Preference number: 5 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRIGSLD*KVPCWH
Trigger: ATGCCAGCATGGTACCTTCAAGTCAAGGGAACCTAT...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CAA 90 bp CTTGACATCCACGACAAAAACTACCAAGTCCTCTCATTAGTGTATAATCATTCTATAGGTTCCCTTGACTaGAAGGTACCATGCTGGCAT +
Preference number: 5 (lower is better)
Translates to: LDIHDKNYQVLSLVYNHSIGSLD*KVPCWH
Trigger: ATGCCAGCATGGTACCTTCAAGTCAAGGGAACCTAT...AGAATGATTATACACTAATGAGAGGACTTGGTAGTTTTTGTCGTGGATGTCAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CAA 90 bp CCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCCATTGGCCACAGGGATATTaGCAACTTCTGTATATCCAT +
Preference number: 5 (lower is better)
Translates to: PLSHINKNRANQACPHLHWPQGY*QLLYIH
Trigger: ATGGATATACAGAAGTTGCAAATATCCCTGTGGCCA...ATGGAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CAA 90 bp ACTGTACTCATTAAATCTTGTGATGACACTCACATCAATGAAAGGCTTGGGCTCTGGCCACAGGGATATTaGCAACTTCTGTATATCCAT +
Preference number: 5 (lower is better)
Translates to: TVLIKSCDDTHINERLGLWPQGY*QLLYIH
Trigger: ATGGATATACAGAAGTTGCAAATATCCCTGTGGCCA...GAGCCCAAGCCTTTCATTGATGTGAGTGTCATCACAAGATTTAATGAGTACAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR CAA 90 bp AACATGTCATTTCTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCAGGTACTCCATATTGTaGGCAGGACACTTCACACAC +
Preference number: 5 (lower is better)
Translates to: NMSFLPLVTFLHSITWFTRYSIL*AGHFTH
Trigger: GTGTGTGAAGTGTCCTGCCAACAATATGGAGTACCT...GGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAGAAATGACATGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CAA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGAGGTACTCCATATTGTaGGCAGGACACTTCACACAC +
Preference number: 5 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRRYSIL*AGHFTH
Trigger: GTGTGTGAAGTGTCCTGCCAACAATATGGAGTACCT...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CAA 90 bp CTTGACATCCACGACAAAAACTACCAAGTCCTCTCATTAGTGTATAATCATTCTAGGTACTCCATATTGTaGGCAGGACACTTCACACAC +
Preference number: 5 (lower is better)
Translates to: LDIHDKNYQVLSLVYNHSRYSIL*AGHFTH
Trigger: GTGTGTGAAGTGTCCTGCCAACAATATGGAGTACCT...AGAATGATTATACACTAATGAGAGGACTTGGTAGTTTTTGTCGTGGATGTCAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CAA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGACCAGGTACTCCATATaGTTGGCAGGACACTTCACA +
Preference number: 5 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRTRYSI*LAGHFT
Trigger: TGTGAAGTGTCCTGCCAACAATATGGAGTACCTGGT...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CAA 90 bp GTAACAGTATCTGCTTCTGAGCTCAATAAAGGCTTTCATCTATTAAACGCAGAAACCAGGTACTCCATATaGTTGGCAGGACACTTCACA +
Preference number: 5 (lower is better)
Translates to: VTVSASELNKGFHLLNAETRYSI*LAGHFT
Trigger: TGTGAAGTGTCCTGCCAACAATATGGAGTACCTGGT...TTCTGCGTTTAATAGATGAAAGCCTTTATTGAGCTCAGAAGCAGATACTGTTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CAA 90 bp CCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCCATTTGAAACTGCTCATTTaGATGCTAACACCAACCAGG +
Preference number: 5 (lower is better)
Translates to: PLSHINKNRANQACPHLHLKLLI*MLTPTR
Trigger: CCTGGTTGGTGTTAGCATCAAAATGAGCAGTTTCAA...ATGGAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CAA 90 bp CTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCAAGAATGTTAACAAAGTCGAGCCTGTCTaGGCAGCAAGACCATTTCTT +
Preference number: 5 (lower is better)
Translates to: LPLVTFLHSITWFTKNVNKVEPV*AARPFL
Trigger: AAGAAATGGTCTTGCTGCCAAGACAGGCTCGACTTT...GTTAACATTCTTGGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CAA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGAAAGTCGAGCCTGTCTaGGCAGCAAGACCATTTCTT +
Preference number: 5 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRKVEPV*AARPFL
Trigger: AAGAAATGGTCTTGCTGCCAAGACAGGCTCGACTTT...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CAA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAATCTGCCTGCAGTGCTTaGGAAACCAAGGCAACATCA +
Preference number: 5 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKSACSA*ETKATS
Trigger: TGATGTTGCCTTGGTTTCCAAAGCACTGCAGGCAGA...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CAA 90 bp CCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCCATACATCAATGAAAGGCTaGGGCTCTGAATCTAAAGCA +
Preference number: 5 (lower is better)
Translates to: PLSHINKNRANQACPHLHTSMKG*GSESKA
Trigger: TGCTTTAGATTCAGAGCCCAAGCCTTTCATTGATGT...ATGGAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CAA 90 bp ACTGTACTCATTAAATCTTGTGATGACACTCACATCAATGAAAGGCTTGGGCTCATAAGGATTGTCTTCTaGCTTCCAGGAATAGCACAG +
Preference number: 5 (lower is better)
Translates to: TVLIKSCDDTHINERLGLIRIVF*LPGIAQ
Trigger: CTGTGCTATTCCTGGAAGCAAGAAGACAATCCTTAT...GAGCCCAAGCCTTTCATTGATGTGAGTGTCATCACAAGATTTAATGAGTACAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR CAA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGATGTTGCAATCCAGTTaGGGCGTTTTGAGCTCTGAT +
Preference number: 5 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRMLQSS*GVLSSD
Trigger: ATCAGAGCTCAAAACGCCCAAACTGGATTGCAACAT...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CAA 90 bp GAACCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCCCAGCTTCATCAATGTaGCTGATGTTATTTGCTCAA +
Preference number: 5 (lower is better)
Translates to: EPLSHINKNRANQACPHLPASSM*LMLFAQ
Trigger: TTGAGCAAATAACATCAGCAACATTGATGAAGCTGG...GAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGGTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CAA 90 bp CCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCCATAGGTTTCCTCTGCTCTaGCAAAAAGTAGTTGTACAT +
Preference number: 5 (lower is better)
Translates to: PLSHINKNRANQACPHLHRFPLL*QKVVVH
Trigger: ATGTACAACTACTTTTTGCAAGAGCAGAGGAAACCT...ATGGAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CAA 90 bp CCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCCATAGATCTAATCCAGGTTaGTCAGAAGAGCTAATCAAG +
Preference number: 5 (lower is better)
Translates to: PLSHINKNRANQACPHLHRSNPG*SEELIK
Trigger: CTTGATTAGCTCTTCTGACAAACCTGGATTAGATCT...ATGGAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CAA 90 bp AACATGTCATTTCTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCAGAAGCGACAAGAGCTaGTGTTTGCAGCAACAGATT +
Preference number: 5 (lower is better)
Translates to: NMSFLPLVTFLHSITWFTRSDKS*CLQQQI
Trigger: AATCTGTTGCTGCAAACACAAGCTCTTGTCGCTTCT...GGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAGAAATGACATGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CAA 90 bp GAACCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCCAGAAAGCATTCAACTaGGCAAATAGCCTGAAATCA +
Preference number: 5 (lower is better)
Translates to: EPLSHINKNRANQACPHLQKAFN*ANSLKS
Trigger: TGATTTCAGGCTATTTGCCAAGTTGAATGCTTTCTG...GAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGGTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CAA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTGGAGGAATCCAGTCCTaGAATCTTGATTTCGGCGAT +
Preference number: 5 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFGGIQS*NLDFGD
Trigger: ATCGCCGAAATCAAGATTCAAGGACTGGATTCCTCC...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CAA 90 bp GAACCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCCATCACTGTCTGCCTTaGTCAGTAACATTTTCAGAA +
Preference number: 5 (lower is better)
Translates to: EPLSHINKNRANQACPHLHHCLP*SVTFSE
Trigger: TTCTGAAAATGTTACTGACAAAGGCAGACAGTGATG...GAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGGTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CAA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTTTGCTGGATACAGCTTaGACAGCGATACTTCTGGAC +
Preference number: 5 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFLLDTA*TAILLD
Trigger: GTCCAGAAGTATCGCTGTCAAAGCTGTATCCAGCAA...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CAA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAATTGCTGGATACAGCTTaGACAGCGATACTTCTGGAC +
Preference number: 5 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKLLDTA*TAILLD
Trigger: GTCCAGAAGTATCGCTGTCAAAGCTGTATCCAGCAA...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CAA 90 bp CCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCCATGCAGTTTGGAAATTGTaGAGGAAGTTCAAAAGAGAC +
Preference number: 5 (lower is better)
Translates to: PLSHINKNRANQACPHLHAVWKL*RKFKRD
Trigger: GTCTCTTTTGAACTTCCTCAACAATTTCCAAACTGC...ATGGAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CAA 90 bp GAACCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCGCAGTTTGGAAATTGTaGAGGAAGTTCAAAAGAGAC +
Preference number: 5 (lower is better)
Translates to: EPLSHINKNRANQACPHLAVWKL*RKFKRD
Trigger: GTCTCTTTTGAACTTCCTCAACAATTTCCAAACTGC...GAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGGTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CAA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGAAGGCGGAAACTCTTTaGAGCCAAGTCTTTCATGCT +
Preference number: 5 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRKAETL*SQVFHA
Trigger: AGCATGAAAGACTTGGCTCAAAAGAGTTTCCGCCTT...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CAA 90 bp CCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCCATAATTTCAATGTCATTTaGTGGCAAGCTAGCCTGCAA +
Preference number: 5 (lower is better)
Translates to: PLSHINKNRANQACPHLHNFNVI*WQASLQ
Trigger: TTGCAGGCTAGCTTGCCACAAAATGACATTGAAATT...ATGGAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CAA 90 bp GAACCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCGATGGTCAGGTACACTaGAAACATCAACTTTTCTCA +
Preference number: 5 (lower is better)
Translates to: EPLSHINKNRANQACPHLDGQVH*KHQLFS
Trigger: TGAGAAAAGTTGATGTTTCAAGTGTACCTGACCATC...GAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGGTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CAA 90 bp CCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCCATCAATCTTCTTGTTCTTaGAGATGGTCAGGTACACTT +
Preference number: 5 (lower is better)
Translates to: PLSHINKNRANQACPHLHQSSCS*RWSGTL
Trigger: AAGTGTACCTGACCATCTCAAAGAACAAGAAGATTG...ATGGAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CAA 90 bp GAACCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCGCACATACATACAGCTaGTCAAGAACAGCATCAATT +
Preference number: 5 (lower is better)
Translates to: EPLSHINKNRANQACPHLAHTYS*SRTASI
Trigger: AATTGATGCTGTTCTTGACAAGCTGTATGTATGTGC...GAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGGTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CAA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGGTTCGAGTTTGGATGTaGACAGAGAAAGGTTGCACT +
Preference number: 5 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRVRVWM*TEKGCT
Trigger: AGTGCAACCTTTCTCTGTCAACATCCAAACTCGAAC...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CAA 90 bp GAACCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCTGGACCAGGCACTGGTaGAAATTTTTAATTGTACCT +
Preference number: 5 (lower is better)
Translates to: EPLSHINKNRANQACPHLWTRHW*KFLIVP
Trigger: AGGTACAATTAAAAATTTCAACCAGTGCCTGGTCCA...GAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGGTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CAA 90 bp CCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCCATTGGACCAGGCACTGGTaGAAATTTTTAATTGTACCT +
Preference number: 5 (lower is better)
Translates to: PLSHINKNRANQACPHLHWTRHW*KFLIVP
Trigger: AGGTACAATTAAAAATTTCAACCAGTGCCTGGTCCA...ATGGAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CAA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTACCAGGTACTCCATATaGTTGGCAGGACACTTCACA +
Preference number: 5 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFTRYSI*LAGHFT
Trigger: TGTGAAGTGTCCTGCCAACAATATGGAGTACCTGGT...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CAA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGACTCTCACACAAAGTTaGCCTGACAAACTTTCTGGC +
Preference number: 5 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRTLTQS*PDKLSG
Trigger: GCCAGAAAGTTTGTCAGGCAAACTTTGTGTGAGAGT...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CAA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAAAAAGTCGAGCCTGTCTaGGCAGCAAGACCATTTCTT +
Preference number: 5 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKKVEPV*AARPFL
Trigger: AAGAAATGGTCTTGCTGCCAAGACAGGCTCGACTTT...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
40% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CAA 90 bp CCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCCATAGTGTATCTGGATGTTaGCATCATATGGAAACTGTC +
Preference number: 5 (lower is better)
Translates to: PLSHINKNRANQACPHLHSVSGC*HHMETV
Trigger: GACAGTTTCCATATGATGCAAACATCCAGATACACT...ATGGAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CAA 90 bp GAACCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCATCTTCAAATGGACATaGCCAGTCTACACACATAAG +
Preference number: 5 (lower is better)
Translates to: EPLSHINKNRANQACPHLIFKWT*PVYTHK
Trigger: CTTATGTGTGTAGACTGGCAATGTCCATTTGAAGAT...GAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGGTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CAA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGAGCACACGCTGGTTTTaGGATGTCAGTCTTTCTTCT +
Preference number: 5 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRSTRWF*DVSLSS
Trigger: AGAAGAAAGACTGACATCCAAAAACCAGCGTGTGCT...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CAA 90 bp GTAACAGTATCTGCTTCTGAGCTCAATAAAGGCTTTCATCTATTAAACGCAGAAAGCACACGCTGGTTTTaGGATGTCAGTCTTTCTTCT +
Preference number: 5 (lower is better)
Translates to: VTVSASELNKGFHLLNAESTRWF*DVSLSS
Trigger: AGAAGAAAGACTGACATCCAAAAACCAGCGTGTGCT...TTCTGCGTTTAATAGATGAAAGCCTTTATTGAGCTCAGAAGCAGATACTGTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CAA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTATCCATGCCCACACTaGACATCCACGACAAAAACT +
Preference number: 5 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRYPCPH*TSTTKT
Trigger: AGTTTTTGTCGTGGATGTCAAGTGTGGGCATGGATA...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CAA 90 bp CTTGACATCCACGACAAAAACTACCAAGTCCTCTCATTAGTGTATAATCATTCTTATCCATGCCCACACTaGACATCCACGACAAAAACT +
Preference number: 5 (lower is better)
Translates to: LDIHDKNYQVLSLVYNHSYPCPH*TSTTKT
Trigger: AGTTTTTGTCGTGGATGTCAAGTGTGGGCATGGATA...AGAATGATTATACACTAATGAGAGGACTTGGTAGTTTTTGTCGTGGATGTCAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CAA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAACCAAAATCTGTTCCCTaGATCTCTGGTAAGACATGC +
Preference number: 5 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKPKSVP*ISGKTC
Trigger: GCATGTCTTACCAGAGATCAAGGGAACAGATTTTGG...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CAA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTCCAAAATCTGTTCCCTaGATCTCTGGTAAGACATGC +
Preference number: 5 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFPKSVP*ISGKTC
Trigger: GCATGTCTTACCAGAGATCAAGGGAACAGATTTTGG...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CAA 90 bp CTTGACATCCACGACAAAAACTACCAAGTCCTCTCATTAGTGTATAATCATTCTGATTCATGTAGAGTTTaGCAGAGGCTGATATTGGCT +
Preference number: 5 (lower is better)
Translates to: LDIHDKNYQVLSLVYNHSDSCRV*QRLILA
Trigger: AGCCAATATCAGCCTCTGCAAAACTCTACATGAATC...AGAATGATTATACACTAATGAGAGGACTTGGTAGTTTTTGTCGTGGATGTCAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR CAA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTATGTTGCAATCCAGTTaGGGCGTTTTGAGCTCTGAT +
Preference number: 5 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFMLQSS*GVLSSD
Trigger: ATCAGAGCTCAAAACGCCCAAACTGGATTGCAACAT...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CAA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGAACTTGAGTAGAAGATaGATGAGCTCCTCATTTGGG +
Preference number: 5 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRNLSRR*MSSSFG
Trigger: CCCAAATGAGGAGCTCATCAATCTTCTACTCAAGTT...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CAA 90 bp GTAACAGTATCTGCTTCTGAGCTCAATAAAGGCTTTCATCTATTAAACGCAGAAAACTTGAGTAGAAGATaGATGAGCTCCTCATTTGGG +
Preference number: 5 (lower is better)
Translates to: VTVSASELNKGFHLLNAENLSRR*MSSSFG
Trigger: CCCAAATGAGGAGCTCATCAATCTTCTACTCAAGTT...TTCTGCGTTTAATAGATGAAAGCCTTTATTGAGCTCAGAAGCAGATACTGTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR CAA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAGAAGCGACAAGAGCTaGTGTTTGCAGCAACAGATT +
Preference number: 5 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFRSDKS*CLQQQI
Trigger: AATCTGTTGCTGCAAACACAAGCTCTTGTCGCTTCT...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CAA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGAGCACACCATCCACTTaGGACATGTCAGTATACAAA +
Preference number: 5 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRSTPST*DMSVYK
Trigger: TTTGTATACTGACATGTCCAAAGTGGATGGTGTGCT...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CAA 90 bp CTTGACATCCACGACAAAAACTACCAAGTCCTCTCATTAGTGTATAATCATTCTTCTACCACTACTGCATaGGTGGAAATAGAAGACTGT +
Preference number: 5 (lower is better)
Translates to: LDIHDKNYQVLSLVYNHSSTTTA*VEIEDC
Trigger: ACAGTCTTCTATTTCCACCAATGCAGTAGTGGTAGA...AGAATGATTATACACTAATGAGAGGACTTGGTAGTTTTTGTCGTGGATGTCAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR CAA 90 bp CCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCCATAATTTCACCTGTCTCTaGTACTCTTGGTTTCACTTT +
Preference number: 5 (lower is better)
Translates to: PLSHINKNRANQACPHLHNFTCL*YSWFHF
Trigger: AAAGTGAAACCAAGAGTACAAGAGACAGGTGAAATT...ATGGAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CAA 90 bp AACATGTCATTTCTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCTCCTTTTGGGAAATGTaGCTGGATACAGCTTTGACA +
Preference number: 5 (lower is better)
Translates to: NMSFLPLVTFLHSITWFTSFWEM*LDTALT
Trigger: TGTCAAAGCTGTATCCAGCAACATTTCCCAAAAGGA...GGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAGAAATGACATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CAA 90 bp ACCATAATACACTTTAGAAAACTTGTCTTCAGCACTACTAAAAACCCACTACACAAGGCGGAAACTCTTTaGAGCCAAGTCTTTCATGCT +
Preference number: 5 (lower is better)
Translates to: TIIHFRKLVFSTTKNPLHKAETL*SQVFHA
Trigger: AGCATGAAAGACTTGGCTCAAAAGAGTTTCCGCCTT...GTGTAGTGGGTTTTTAGTAGTGCTGAAGACAAGTTTTCTAAAGTGTATTATGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR CAA 90 bp CCACTATCACACATAAACAAAAATAGAGCAAACCAAGCGTGTCCACATCTCCATAAAGTGAAAGTCAAATaGGAGACTGACAATCTGGTT +
Preference number: 5 (lower is better)
Translates to: PLSHINKNRANQACPHLHKVKVK*ETDNLV
Trigger: AACCAGATTGTCAGTCTCCAATTTGACTTTCACTTT...ATGGAGATGTGGACACGCTTGGTTTGCTCTATTTTTGTTTATGTGTGATAGTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CAA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGCAATCATTCTCGATGTaGCTCTCTCAATTCCTTCTC +
Preference number: 5 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRQSFSM*LSQFLL
Trigger: GAGAAGGAATTGAGAGAGCAACATCGAGAATGATTG...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CAA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTGTTCGAGTTTGGATGTaGACAGAGAAAGGTTGCACT +
Preference number: 5 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFVRVWM*TEKGCT
Trigger: AGTGCAACCTTTCTCTGTCAACATCCAAACTCGAAC...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CAA 90 bp AACATGTCATTTCTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCATCATCTGTTCGAGTTaGGATGTTGACAGAGAAAGG +
Preference number: 5 (lower is better)
Translates to: NMSFLPLVTFLHSITWFTIICSS*DVDRER
Trigger: CCTTTCTCTGTCAACATCCAAACTCGAACAGATGAT...GGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAGAAATGACATGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CAA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGATCATCTGTTCGAGTTaGGATGTTGACAGAGAAAGG +
Preference number: 5 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRIICSS*DVDRER
Trigger: CCTTTCTCTGTCAACATCCAAACTCGAACAGATGAT...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CAA 90 bp CTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCAAGAATGTTAACATCATCTGTTCGAGTTaGGATGTTGACAGAGAAAGG +
Preference number: 5 (lower is better)
Translates to: LPLVTFLHSITWFTKNVNIICSS*DVDRER
Trigger: CCTTTCTCTGTCAACATCCAAACTCGAACAGATGAT...GTTAACATTCTTGGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CAA 90 bp GTAACAGTATCTGCTTCTGAGCTCAATAAAGGCTTTCATCTATTAAACGCAGAATTTCCGTTATTTCTGTaGCCGTGTCAACACCAAGAA +
Preference number: 5 (lower is better)
Translates to: VTVSASELNKGFHLLNAEFPLFL*PCQHQE
Trigger: TTCTTGGTGTTGACACGGCAACAGAAATAACGGAAA...TTCTGCGTTTAATAGATGAAAGCCTTTATTGAGCTCAGAAGCAGATACTGTTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR CAA 90 bp AACATGTCATTTCTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCACTCTGAGATTACAATaGGGCTTCACCTTAATGGGA +
Preference number: 5 (lower is better)
Translates to: NMSFLPLVTFLHSITWFTTLRLQ*GFTLMG
Trigger: TCCCATTAAGGTGAAGCCCAATTGTAATCTCAGAGT...GGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAGAAATGACATGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CAA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGACTCTGAGATTACAATaGGGCTTCACCTTAATGGGA +
Preference number: 5 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRTLRLQ*GFTLMG
Trigger: TCCCATTAAGGTGAAGCCCAATTGTAATCTCAGAGT...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CAA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGGCCACAGGGATATTaGCAACTTCTGTATATCCAT +
Preference number: 5 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRWPQGY*QLLYIH
Trigger: ATGGATATACAGAAGTTGCAAATATCCCTGTGGCCA...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CAA 90 bp TCGTTTAATAGGGCTACGAATAGGGAGGCGCATTTCCATTGGATCTTTATCAAACTTTATTCCCTTCAGTaGCATCAATTTGTACCAAGA +
Preference number: 5 (lower is better)
Translates to: SFNRATNREAHFHWIFIKLYSLQ*HQFVPR
Trigger: TCTTGGTACAAATTGATGCAACTGAAGGGAATAAAG...TTTGATAAAGATCCAATGGAAATGCGCCTCCCTATTCGTAGCCCTATTAAACGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR CAA 90 bp AACATGTCATTTCTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCATGGAGAAATGGTTTTaGATCTGTAGAGGAGAGCGA +
Preference number: 5 (lower is better)
Translates to: NMSFLPLVTFLHSITWFTMEKWF*ICRGER
Trigger: TCGCTCTCCTCTACAGATCAAAAACCATTTCTCCAT...GGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAGAAATGACATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CAA 90 bp GTAACAGTATCTGCTTCTGAGCTCAATAAAGGCTTTCATCTATTAAACGCAGAAATGGAGAAATGGTTTTaGATCTGTAGAGGAGAGCGA +
Preference number: 5 (lower is better)
Translates to: VTVSASELNKGFHLLNAEMEKWF*ICRGER
Trigger: TCGCTCTCCTCTACAGATCAAAAACCATTTCTCCAT...TTCTGCGTTTAATAGATGAAAGCCTTTATTGAGCTCAGAAGCAGATACTGTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CAA 90 bp AATACAAAATCTTCAAATGGACATTGCCAGTCTACACACATAAGGCCCAGGATTATACAACAGGGAACATaGCACCTGGTAACTGATTAT +
Preference number: 5 (lower is better)
Translates to: NTKSSNGHCQSTHIRPRIIQQGT*HLVTDY
Trigger: ATAATCAGTTACCAGGTGCAATGTTCCCTGTTGTAT...AATCCTGGGCCTTATGTGTGTAGACTGGCAATGTCCATTTGAAGATTTTGTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR CAA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGACATCAATGAAAGGCTaGGGCTCTGAATCTAAAGCA +
Preference number: 5 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRTSMKG*GSESKA
Trigger: TGCTTTAGATTCAGAGCCCAAGCCTTTCATTGATGT...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CAA 90 bp AACATGTCATTTCTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCCACCTTCCACAGGTTTaGTTATTATTCCAGTCACTC +
Preference number: 5 (lower is better)
Translates to: NMSFLPLVTFLHSITWFTHLPQV*LLFQSL
Trigger: GAGTGACTGGAATAATAACAAAACCTGTGGAAGGTG...GGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAGAAATGACATGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CAA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGCACCTTCCACAGGTTTaGTTATTATTCCAGTCACTC +
Preference number: 5 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRHLPQV*LLFQSL
Trigger: GAGTGACTGGAATAATAACAAAACCTGTGGAAGGTG...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CAA 90 bp CTTGACATCCACGACAAAAACTACCAAGTCCTCTCATTAGTGTATAATCATTCTCACCTTCCACAGGTTTaGTTATTATTCCAGTCACTC +
Preference number: 5 (lower is better)
Translates to: LDIHDKNYQVLSLVYNHSHLPQV*LLFQSL
Trigger: GAGTGACTGGAATAATAACAAAACCTGTGGAAGGTG...AGAATGATTATACACTAATGAGAGGACTTGGTAGTTTTTGTCGTGGATGTCAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CAA 90 bp AACATGTCATTTCTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCATAAGGATTGTCTTCTaGCTTCCAGGAATAGCACAG +
Preference number: 5 (lower is better)
Translates to: NMSFLPLVTFLHSITWFTIRIVF*LPGIAQ
Trigger: CTGTGCTATTCCTGGAAGCAAGAAGACAATCCTTAT...GGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAGAAATGACATGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CAA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAAGATTCATGTAGAGTTTaGCAGAGGCTGATATTGGCT +
Preference number: 5 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKDSCRV*QRLILA
Trigger: AGCCAATATCAGCCTCTGCAAAACTCTACATGAATC...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CAA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGCAAGAACAGAATCAATaGCATATTTCCACCATCGTC +
Preference number: 5 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRQEQNQ*HISTIV
Trigger: GACGATGGTGGAAATATGCAATTGATTCTGTTCTTG...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CAA 90 bp CTTGACATCCACGACAAAAACTACCAAGTCCTCTCATTAGTGTATAATCATTCTCAAGAACAGAATCAATaGCATATTTCCACCATCGTC +
Preference number: 5 (lower is better)
Translates to: LDIHDKNYQVLSLVYNHSQEQNQ*HISTIV
Trigger: GACGATGGTGGAAATATGCAATTGATTCTGTTCTTG...AGAATGATTATACACTAATGAGAGGACTTGGTAGTTTTTGTCGTGGATGTCAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR CAA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGCCAGCTTCATCAATGTaGCTGATGTTATTTGCTCAA +
Preference number: 5 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRPASSM*LMLFAQ
Trigger: TTGAGCAAATAACATCAGCAACATTGATGAAGCTGG...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CAA 90 bp AACATGTCATTTCTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCCCAGCTTCATCAATGTaGCTGATGTTATTTGCTCAA +
Preference number: 5 (lower is better)
Translates to: NMSFLPLVTFLHSITWFTPASSM*LMLFAQ
Trigger: TTGAGCAAATAACATCAGCAACATTGATGAAGCTGG...GGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAGAAATGACATGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249837.7
ENST00000644861.2
CDS-3UTR CAA 90 bp CTTGACATCCACGACAAAAACTACCAAGTCCTCTCATTAGTGTATAATCATTCTAGATCTAATCCAGGTTaGTCAGAAGAGCTAATCAAG +
Preference number: 5 (lower is better)
Translates to: LDIHDKNYQVLSLVYNHSRSNPG*SEELIK
Trigger: CTTGATTAGCTCTTCTGACAAACCTGGATTAGATCT...AGAATGATTATACACTAATGAGAGGACTTGGTAGTTTTTGTCGTGGATGTCAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR CAA 90 bp CTTGACATCCACGACAAAAACTACCAAGTCCTCTCATTAGTGTATAATCATTCTCAGAAAGCATTCAACTaGGCAAATAGCCTGAAATCA +
Preference number: 5 (lower is better)
Translates to: LDIHDKNYQVLSLVYNHSQKAFN*ANSLKS
Trigger: TGATTTCAGGCTATTTGCCAAGTTGAATGCTTTCTG...AGAATGATTATACACTAATGAGAGGACTTGGTAGTTTTTGTCGTGGATGTCAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR CAA 90 bp ACCATAATACACTTTAGAAAACTTGTCTTCAGCACTACTAAAAACCCACTACACAGCACACCATCCACTTaGGACATGTCAGTATACAAA +
Preference number: 5 (lower is better)
Translates to: TIIHFRKLVFSTTKNPLHSTPST*DMSVYK
Trigger: TTTGTATACTGACATGTCCAAAGTGGATGGTGTGCT...GTGTAGTGGGTTTTTAGTAGTGCTGAAGACAAGTTTTCTAAAGTGTATTATGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR CAA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAATCTACCACTACTGCATaGGTGGAAATAGAAGACTGT +
Preference number: 5 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKSTTTA*VEIEDC
Trigger: ACAGTCTTCTATTTCCACCAATGCAGTAGTGGTAGA...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CAA 90 bp CTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCAAGAATGTTAACCTGTCTCTTGTACTCTaGGTTTCACTTTATCCAAGT +
Preference number: 5 (lower is better)
Translates to: LPLVTFLHSITWFTKNVNLSLVL*VSLYPS
Trigger: ACTTGGATAAAGTGAAACCAAGAGTACAAGAGACAG...GTTAACATTCTTGGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CAA 90 bp GTAACAGTATCTGCTTCTGAGCTCAATAAAGGCTTTCATCTATTAAACGCAGAACTGTCTCTTGTACTCTaGGTTTCACTTTATCCAAGT +
Preference number: 5 (lower is better)
Translates to: VTVSASELNKGFHLLNAELSLVL*VSLYPS
Trigger: ACTTGGATAAAGTGAAACCAAGAGTACAAGAGACAG...TTCTGCGTTTAATAGATGAAAGCCTTTATTGAGCTCAGAAGCAGATACTGTTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR CAA 90 bp GATACCCCAAAGATTTTCCATTTCCTTAGACGTATCTTTGGATCCATCTTCTTTCTGTCTCTTGTACTCTaGGTTTCACTTTATCCAAGT +
Preference number: 5 (lower is better)
Translates to: DTPKIFHFLRRIFGSIFFLSLVL*VSLYPS
Trigger: ACTTGGATAAAGTGAAACCAAGAGTACAAGAGACAG...AAAGAAGATGGATCCAAAGATACGTCTAAGGAAATGGAAAATCTTTGGGGTATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR CAA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGCATCACTGTCTGCCTTaGTCAGTAACATTTTCAGAA +
Preference number: 5 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRHHCLP*SVTFSE
Trigger: TTCTGAAAATGTTACTGACAAAGGCAGACAGTGATG...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CAA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTTCCTTTTGGGAAATGTaGCTGGATACAGCTTTGACA +
Preference number: 5 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFSFWEM*LDTALT
Trigger: TGTCAAAGCTGTATCCAGCAACATTTCCCAAAAGGA...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CAA 90 bp ACCATAATACACTTTAGAAAACTTGTCTTCAGCACTACTAAAAACCCACTACACTCCTTTTGGGAAATGTaGCTGGATACAGCTTTGACA +
Preference number: 5 (lower is better)
Translates to: TIIHFRKLVFSTTKNPLHSFWEM*LDTALT
Trigger: TGTCAAAGCTGTATCCAGCAACATTTCCCAAAAGGA...GTGTAGTGGGTTTTTAGTAGTGCTGAAGACAAGTTTTCTAAAGTGTATTATGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR CAA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGATCAAACACATCCTTTaGGGAAATGTTGCTGGATAC +
Preference number: 5 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRIKHIL*GNVAGY
Trigger: GTATCCAGCAACATTTCCCAAAAGGATGTGTTTGAT...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CAA 90 bp GTAACAGTATCTGCTTCTGAGCTCAATAAAGGCTTTCATCTATTAAACGCAGAAATCAAACACATCCTTTaGGGAAATGTTGCTGGATAC +
Preference number: 5 (lower is better)
Translates to: VTVSASELNKGFHLLNAEIKHIL*GNVAGY
Trigger: GTATCCAGCAACATTTCCCAAAAGGATGTGTTTGAT...TTCTGCGTTTAATAGATGAAAGCCTTTATTGAGCTCAGAAGCAGATACTGTTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR CAA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGAATTTCAATGTCATTTaGTGGCAAGCTAGCCTGCAA +
Preference number: 5 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRNFNVI*WQASLQ
Trigger: TTGCAGGCTAGCTTGCCACAAAATGACATTGAAATT...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CAA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGGATGGTCAGGTACACTaGAAACATCAACTTTTCTCA +
Preference number: 5 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRDGQVH*KHQLFS
Trigger: TGAGAAAAGTTGATGTTTCAAGTGTACCTGACCATC...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CAA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGCAATCTTCTTGTTCTTaGAGATGGTCAGGTACACTT +
Preference number: 5 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRQSSCS*RWSGTL
Trigger: AAGTGTACCTGACCATCTCAAAGAACAAGAAGATTG...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CAA 90 bp GTAACAGTATCTGCTTCTGAGCTCAATAAAGGCTTTCATCTATTAAACGCAGAACAATCTTCTTGTTCTTaGAGATGGTCAGGTACACTT +
Preference number: 5 (lower is better)
Translates to: VTVSASELNKGFHLLNAEQSSCS*RWSGTL
Trigger: AAGTGTACCTGACCATCTCAAAGAACAAGAAGATTG...TTCTGCGTTTAATAGATGAAAGCCTTTATTGAGCTCAGAAGCAGATACTGTTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR CAA 90 bp ACCATAATACACTTTAGAAAACTTGTCTTCAGCACTACTAAAAACCCACTACACCAATCATTCTCGATGTaGCTCTCTCAATTCCTTCTC +
Preference number: 5 (lower is better)
Translates to: TIIHFRKLVFSTTKNPLHQSFSM*LSQFLL
Trigger: GAGAAGGAATTGAGAGAGCAACATCGAGAATGATTG...GTGTAGTGGGTTTTTAGTAGTGCTGAAGACAAGTTTTCTAAAGTGTATTATGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR CAA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGGCACATACATACAGCTaGTCAAGAACAGCATCAATT +
Preference number: 5 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRAHTYS*SRTASI
Trigger: AATTGATGCTGTTCTTGACAAGCTGTATGTATGTGC...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CAA 90 bp CTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCAAGAATGTTAACGCACATACATACAGCTaGTCAAGAACAGCATCAATT +
Preference number: 5 (lower is better)
Translates to: LPLVTFLHSITWFTKNVNAHTYS*SRTASI
Trigger: AATTGATGCTGTTCTTGACAAGCTGTATGTATGTGC...GTTAACATTCTTGGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CAA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTATCATCTGTTCGAGTTaGGATGTTGACAGAGAAAGG +
Preference number: 5 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFIICSS*DVDRER
Trigger: CCTTTCTCTGTCAACATCCAAACTCGAACAGATGAT...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CAA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGGATCCATCTTCTTTaGTTTTTGGAGACAATGCAG +
Preference number: 5 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRWIHLL*FLETMQ
Trigger: CTGCATTGTCTCCAAAAACAAAAGAAGATGGATCCA...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CAA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTTTTCCGTTATTTCTGTaGCCGTGTCAACACCAAGAA +
Preference number: 5 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFFPLFL*PCQHQE
Trigger: TTCTTGGTGTTGACACGGCAACAGAAATAACGGAAA...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
38% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CAA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAAACTCTGAGATTACAATaGGGCTTCACCTTAATGGGA +
Preference number: 5 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKTLRLQ*GFTLMG
Trigger: TCCCATTAAGGTGAAGCCCAATTGTAATCTCAGAGT...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CAA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTTGGCCACAGGGATATTaGCAACTTCTGTATATCCAT +
Preference number: 5 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFWPQGY*QLLYIH
Trigger: ATGGATATACAGAAGTTGCAAATATCCCTGTGGCCA...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CAA 90 bp ACCATAATACACTTTAGAAAACTTGTCTTCAGCACTACTAAAAACCCACTACACTGGCCACAGGGATATTaGCAACTTCTGTATATCCAT +
Preference number: 5 (lower is better)
Translates to: TIIHFRKLVFSTTKNPLHWPQGY*QLLYIH
Trigger: ATGGATATACAGAAGTTGCAAATATCCCTGTGGCCA...GTGTAGTGGGTTTTTAGTAGTGCTGAAGACAAGTTTTCTAAAGTGTATTATGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR CAA 90 bp GTAACAGTATCTGCTTCTGAGCTCAATAAAGGCTTTCATCTATTAAACGCAGAATTCAGTTGCATCAATTaGTACCAAGACAGAGTCAGA +
Preference number: 5 (lower is better)
Translates to: VTVSASELNKGFHLLNAEFSCIN*YQDRVR
Trigger: TCTGACTCTGTCTTGGTACAAATTGATGCAACTGAA...TTCTGCGTTTAATAGATGAAAGCCTTTATTGAGCTCAGAAGCAGATACTGTTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CAA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTTCAGTTGCATCAATTaGTACCAAGACAGAGTCAGA +
Preference number: 5 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRFSCIN*YQDRVR
Trigger: TCTGACTCTGTCTTGGTACAAATTGATGCAACTGAA...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CAA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTATGGAGAAATGGTTTTaGATCTGTAGAGGAGAGCGA +
Preference number: 5 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFMEKWF*ICRGER
Trigger: TCGCTCTCCTCTACAGATCAAAAACCATTTCTCCAT...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CAA 90 bp GTAACAGTATCTGCTTCTGAGCTCAATAAAGGCTTTCATCTATTAAACGCAGAATGGACCAGGCACTGGTaGAAATTTTTAATTGTACCT +
Preference number: 5 (lower is better)
Translates to: VTVSASELNKGFHLLNAEWTRHW*KFLIVP
Trigger: AGGTACAATTAAAAATTTCAACCAGTGCCTGGTCCA...TTCTGCGTTTAATAGATGAAAGCCTTTATTGAGCTCAGAAGCAGATACTGTTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CAA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAATTGAAACTGCTCATTTaGATGCTAACACCAACCAGG +
Preference number: 5 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKLKLLI*MLTPTR
Trigger: CCTGGTTGGTGTTAGCATCAAAATGAGCAGTTTCAA...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CAA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTTTGAAACTGCTCATTTaGATGCTAACACCAACCAGG +
Preference number: 5 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFLKLLI*MLTPTR
Trigger: CCTGGTTGGTGTTAGCATCAAAATGAGCAGTTTCAA...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CAA 90 bp AACATGTCATTTCTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCCTAATGATGACTTGTTaGCAATGGTACAAAAGGGAG +
Preference number: 5 (lower is better)
Translates to: NMSFLPLVTFLHSITWFTLMMTC*QWYKRE
Trigger: CTCCCTTTTGTACCATTGCAAACAAGTCATCATTAG...GGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAGAAATGACATGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CAA 90 bp GTAACAGTATCTGCTTCTGAGCTCAATAAAGGCTTTCATCTATTAAACGCAGAACTAATGATGACTTGTTaGCAATGGTACAAAAGGGAG +
Preference number: 5 (lower is better)
Translates to: VTVSASELNKGFHLLNAELMMTC*QWYKRE
Trigger: CTCCCTTTTGTACCATTGCAAACAAGTCATCATTAG...TTCTGCGTTTAATAGATGAAAGCCTTTATTGAGCTCAGAAGCAGATACTGTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CAA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGAGTGTATCTGGATGTTaGCATCATATGGAAACTGTC +
Preference number: 5 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRSVSGC*HHMETV
Trigger: GACAGTTTCCATATGATGCAAACATCCAGATACACT...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CAA 90 bp CTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCAAGAATGTTAACATACAACAGGGAACATaGCACCTGGTAACTGATTAT +
Preference number: 5 (lower is better)
Translates to: LPLVTFLHSITWFTKNVNIQQGT*HLVTDY
Trigger: ATAATCAGTTACCAGGTGCAATGTTCCCTGTTGTAT...GTTAACATTCTTGGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CAA 90 bp CTTGACATCCACGACAAAAACTACCAAGTCCTCTCATTAGTGTATAATCATTCTATACAACAGGGAACATaGCACCTGGTAACTGATTAT +
Preference number: 5 (lower is better)
Translates to: LDIHDKNYQVLSLVYNHSIQQGT*HLVTDY
Trigger: ATAATCAGTTACCAGGTGCAATGTTCCCTGTTGTAT...AGAATGATTATACACTAATGAGAGGACTTGGTAGTTTTTGTCGTGGATGTCAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CAA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTACATCAATGAAAGGCTaGGGCTCTGAATCTAAAGCA +
Preference number: 5 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFTSMKG*GSESKA
Trigger: TGCTTTAGATTCAGAGCCCAAGCCTTTCATTGATGT...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CAA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGCTTGTTGGATTAACTTaGTCCGTCTTCTTTCAGCTT +
Preference number: 5 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRLVGLT*SVFFQL
Trigger: AAGCTGAAAGAAGACGGACAAAGTTAATCCAACAAG...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CAA 90 bp CTTGACATCCACGACAAAAACTACCAAGTCCTCTCATTAGTGTATAATCATTCTCTTGTTGGATTAACTTaGTCCGTCTTCTTTCAGCTT +
Preference number: 5 (lower is better)
Translates to: LDIHDKNYQVLSLVYNHSLVGLT*SVFFQL
Trigger: AAGCTGAAAGAAGACGGACAAAGTTAATCCAACAAG...AGAATGATTATACACTAATGAGAGGACTTGGTAGTTTTTGTCGTGGATGTCAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CAA 90 bp ACCATAATACACTTTAGAAAACTTGTCTTCAGCACTACTAAAAACCCACTACACCACCTTCCACAGGTTTaGTTATTATTCCAGTCACTC +
Preference number: 5 (lower is better)
Translates to: TIIHFRKLVFSTTKNPLHHLPQV*LLFQSL
Trigger: GAGTGACTGGAATAATAACAAAACCTGTGGAAGGTG...GTGTAGTGGGTTTTTAGTAGTGCTGAAGACAAGTTTTCTAAAGTGTATTATGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR CAA 90 bp AACATGTCATTTCTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCATCTTCAAATGGACATaGCCAGTCTACACACATAAG +
Preference number: 5 (lower is better)
Translates to: NMSFLPLVTFLHSITWFTIFKWT*PVYTHK
Trigger: CTTATGTGTGTAGACTGGCAATGTCCATTTGAAGAT...GGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAGAAATGACATGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CAA 90 bp CTTGACATCCACGACAAAAACTACCAAGTCCTCTCATTAGTGTATAATCATTCTGACAGAAGGCTTCTTTaGTATATCCAGTACAGTCTA +
Preference number: 5 (lower is better)
Translates to: LDIHDKNYQVLSLVYNHSDRRLL*YIQYSL
Trigger: TAGACTGTACTGGATATACAAAAGAAGCCTTCTGTC...AGAATGATTATACACTAATGAGAGGACTTGGTAGTTTTTGTCGTGGATGTCAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CAA 90 bp GTAACAGTATCTGCTTCTGAGCTCAATAAAGGCTTTCATCTATTAAACGCAGAACACAGCAATAGCTACTaGTTTCACAATTCACTTGTG +
Preference number: 5 (lower is better)
Translates to: VTVSASELNKGFHLLNAEHSNSY*FHNSLV
Trigger: CACAAGTGAATTGTGAAACAAGTAGCTATTGCTGTG...TTCTGCGTTTAATAGATGAAAGCCTTTATTGAGCTCAGAAGCAGATACTGTTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR CAA 90 bp GATACCCCAAAGATTTTCCATTTCCTTAGACGTATCTTTGGATCCATCTTCTTTCACAGCAATAGCTACTaGTTTCACAATTCACTTGTG +
Preference number: 5 (lower is better)
Translates to: DTPKIFHFLRRIFGSIFFHSNSY*FHNSLV
Trigger: CACAAGTGAATTGTGAAACAAGTAGCTATTGCTGTG...AAAGAAGATGGATCCAAAGATACGTCTAAGGAAATGGAAAATCTTTGGGGTATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650094.1
CDS-3UTR CAA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGATTAATACATTTCTTTaGGGGGAAAGCCTGTCATGG +
Preference number: 5 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRINTFL*GESLSW
Trigger: CCATGACAGGCTTTCCCCCAAAAGAAATGTATTAAT...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000649766.1
CDS-3UTR CAA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTTTTGTATTTCTATGTaGCAATCCAGTTTGGGCGTT +
Preference number: 5 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRFCISM*QSSLGV
Trigger: AACGCCCAAACTGGATTGCAACATAGAAATACAAAA...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CAA 90 bp ACCATAATACACTTTAGAAAACTTGTCTTCAGCACTACTAAAAACCCACTACACCCAGCTTCATCAATGTaGCTGATGTTATTTGCTCAA +
Preference number: 5 (lower is better)
Translates to: TIIHFRKLVFSTTKNPLHPASSM*LMLFAQ
Trigger: TTGAGCAAATAACATCAGCAACATTGATGAAGCTGG...GTGTAGTGGGTTTTTAGTAGTGCTGAAGACAAGTTTTCTAAAGTGTATTATGGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR CAA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAGGTTTCCTCTGCTCTaGCAAAAAGTAGTTGTACAT +
Preference number: 5 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFRFPLL*QKVVVH
Trigger: ATGTACAACTACTTTTTGCAAGAGCAGAGGAAACCT...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CAA 90 bp ACCATAATACACTTTAGAAAACTTGTCTTCAGCACTACTAAAAACCCACTACACAGGTTTCCTCTGCTCTaGCAAAAAGTAGTTGTACAT +
Preference number: 5 (lower is better)
Translates to: TIIHFRKLVFSTTKNPLHRFPLL*QKVVVH
Trigger: ATGTACAACTACTTTTTGCAAGAGCAGAGGAAACCT...GTGTAGTGGGTTTTTAGTAGTGCTGAAGACAAGTTTTCTAAAGTGTATTATGGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR CAA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAGATCTAATCCAGGTTaGTCAGAAGAGCTAATCAAG +
Preference number: 5 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFRSNPG*SEELIK
Trigger: CTTGATTAGCTCTTCTGACAAACCTGGATTAGATCT...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CAA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTCAGAAAGCATTCAACTaGGCAAATAGCCTGAAATCA +
Preference number: 5 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFQKAFN*ANSLKS
Trigger: TGATTTCAGGCTATTTGCCAAGTTGAATGCTTTCTG...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CAA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTCTGTCTCTTGTACTCTaGGTTTCACTTTATCCAAGT +
Preference number: 5 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFLSLVL*VSLYPS
Trigger: ACTTGGATAAAGTGAAACCAAGAGTACAAGAGACAG...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CAA 90 bp CTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCAAGAATGTTAACAATTTCACCTGTCTCTaGTACTCTTGGTTTCACTTT +
Preference number: 5 (lower is better)
Translates to: LPLVTFLHSITWFTKNVNNFTCL*YSWFHF
Trigger: AAAGTGAAACCAAGAGTACAAGAGACAGGTGAAATT...GTTAACATTCTTGGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CAA 90 bp ACCATAATACACTTTAGAAAACTTGTCTTCAGCACTACTAAAAACCCACTACACCATCACTGTCTGCCTTaGTCAGTAACATTTTCAGAA +
Preference number: 5 (lower is better)
Translates to: TIIHFRKLVFSTTKNPLHHHCLP*SVTFSE
Trigger: TTCTGAAAATGTTACTGACAAAGGCAGACAGTGATG...GTGTAGTGGGTTTTTAGTAGTGCTGAAGACAAGTTTTCTAAAGTGTATTATGGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR CAA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAAGCAGTTTGGAAATTGTaGAGGAAGTTCAAAAGAGAC +
Preference number: 5 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKAVWKL*RKFKRD
Trigger: GTCTCTTTTGAACTTCCTCAACAATTTCCAAACTGC...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CAA 90 bp ACCATAATACACTTTAGAAAACTTGTCTTCAGCACTACTAAAAACCCACTACACGCAGTTTGGAAATTGTaGAGGAAGTTCAAAAGAGAC +
Preference number: 5 (lower is better)
Translates to: TIIHFRKLVFSTTKNPLHAVWKL*RKFKRD
Trigger: GTCTCTTTTGAACTTCCTCAACAATTTCCAAACTGC...GTGTAGTGGGTTTTTAGTAGTGCTGAAGACAAGTTTTCTAAAGTGTATTATGGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR CAA 90 bp ACCATAATACACTTTAGAAAACTTGTCTTCAGCACTACTAAAAACCCACTACACAATTTCAATGTCATTTaGTGGCAAGCTAGCCTGCAA +
Preference number: 5 (lower is better)
Translates to: TIIHFRKLVFSTTKNPLHNFNVI*WQASLQ
Trigger: TTGCAGGCTAGCTTGCCACAAAATGACATTGAAATT...GTGTAGTGGGTTTTTAGTAGTGCTGAAGACAAGTTTTCTAAAGTGTATTATGGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR CAA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAAGATGGTCAGGTACACTaGAAACATCAACTTTTCTCA +
Preference number: 5 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKDGQVH*KHQLFS
Trigger: TGAGAAAAGTTGATGTTTCAAGTGTACCTGACCATC...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CAA 90 bp AACATGTCATTTCTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCAAAGTGAAAGTCAAATaGGAGACTGACAATCTGGTT +
Preference number: 5 (lower is better)
Translates to: NMSFLPLVTFLHSITWFTKVKVK*ETDNLV
Trigger: AACCAGATTGTCAGTCTCCAATTTGACTTTCACTTT...GGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAGAAATGACATGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249837.7
ENST00000644861.2
ENST00000650094.1
CDS-3UTR CAA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAAGCACATACATACAGCTaGTCAAGAACAGCATCAATT +
Preference number: 5 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKAHTYS*SRTASI
Trigger: AATTGATGCTGTTCTTGACAAGCTGTATGTATGTGC...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CAA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGGAATGTTCAATGCCTTaGAAGCTTTCCGTTATTTCT +
Preference number: 5 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRECSMP*KLSVIS
Trigger: AGAAATAACGGAAAGCTTCAAAGGCATTGAACATTC...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CAA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAATTCAGTTGCATCAATTaGTACCAAGACAGAGTCAGA +
Preference number: 5 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKFSCIN*YQDRVR
Trigger: TCTGACTCTGTCTTGGTACAAATTGATGCAACTGAA...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CAA 90 bp CCACAAGTTTTTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGCTTTATTCCCTTCAGTaGCATCAATTTGTACCAAGA +
Preference number: 5 (lower is better)
Translates to: PQVFICSQSHYYEKFRWRLYSLQ*HQFVPR
Trigger: TCTTGGTACAAATTGATGCAACTGAAGGGAATAAAG...CCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAAAAACTTGTGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CAA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAATGGACCAGGCACTGGTaGAAATTTTTAATTGTACCT +
Preference number: 5 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKWTRHW*KFLIVP
Trigger: AGGTACAATTAAAAATTTCAACCAGTGCCTGGTCCA...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CAA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAACTAATGATGACTTGTTaGCAATGGTACAAAAGGGAG +
Preference number: 5 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKLMMTC*QWYKRE
Trigger: CTCCCTTTTGTACCATTGCAAACAAGTCATCATTAG...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CAA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTCTAATGATGACTTGTTaGCAATGGTACAAAAGGGAG +
Preference number: 5 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFLMMTC*QWYKRE
Trigger: CTCCCTTTTGTACCATTGCAAACAAGTCATCATTAG...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CAA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAGTGTATCTGGATGTTaGCATCATATGGAAACTGTC +
Preference number: 5 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFSVSGC*HHMETV
Trigger: GACAGTTTCCATATGATGCAAACATCCAGATACACT...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CAA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAAAGTGTATCTGGATGTTaGCATCATATGGAAACTGTC +
Preference number: 5 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKSVSGC*HHMETV
Trigger: GACAGTTTCCATATGATGCAAACATCCAGATACACT...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CAA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAAATACAACAGGGAACATaGCACCTGGTAACTGATTAT +
Preference number: 5 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKIQQGT*HLVTDY
Trigger: ATAATCAGTTACCAGGTGCAATGTTCCCTGTTGTAT...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CAA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTGTACCTAGTCATTCCTaGACAATTGCAAAAAGCCAT +
Preference number: 5 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFVPSHS*TIAKSH
Trigger: ATGGCTTTTTGCAATTGTCAAGGAATGACTAGGTAC...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR CAA 90 bp AACATGTCATTTCTCCCTTTAGTGACCTTTCTTCATTCAATTACCTGGTTTACCCCTTTTTGGCTTCTTTaGGCTTATCTTTTGAACGAT +
Preference number: 5 (lower is better)
Translates to: NMSFLPLVTFLHSITWFTPFWLL*AYLLND
Trigger: ATCGTTCAAAAGATAAGCCAAAAGAAGCCAAAAAGG...GGTAAACCAGGTAATTGAATGAAGAAAGGTCACTAAAGGGAGAAATGACATGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000644861.2
CDS-3UTR CAA 90 bp GTAACAGTATCTGCTTCTGAGCTCAATAAAGGCTTTCATCTATTAAACGCAGAACCTTTTTGGCTTCTTTaGGCTTATCTTTTGAACGAT +
Preference number: 5 (lower is better)
Translates to: VTVSASELNKGFHLLNAEPFWLL*AYLLND
Trigger: ATCGTTCAAAAGATAAGCCAAAAGAAGCCAAAAAGG...TTCTGCGTTTAATAGATGAAAGCCTTTATTGAGCTCAGAAGCAGATACTGTTAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR CAA 90 bp ACCATAATACACTTTAGAAAACTTGTCTTCAGCACTACTAAAAACCCACTACACAGGCACAAGAAAGGTTaGTCAGCTACTTTTAACAGT +
Preference number: 5 (lower is better)
Translates to: TIIHFRKLVFSTTKNPLHRHKKG*SATFNS
Trigger: ACTGTTAAAAGTAGCTGACAAACCTTTCTTGTGCCT...GTGTAGTGGGTTTTTAGTAGTGCTGAAGACAAGTTTTCTAAAGTGTATTATGGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR CAA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAGGCACAAGAAAGGTTaGTCAGCTACTTTTAACAGT +
Preference number: 5 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFRHKKG*SATFNS
Trigger: ACTGTTAAAAGTAGCTGACAAACCTTTCTTGTGCCT...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CAA 90 bp GTAACAGTATCTGCTTCTGAGCTCAATAAAGGCTTTCATCTATTAAACGCAGAAATTAGTTATTTGTGCTaGACTCTCCTAGAAAACTGC +
Preference number: 5 (lower is better)
Translates to: VTVSASELNKGFHLLNAEISYLC*TLLENC
Trigger: GCAGTTTTCTAGGAGAGTCAAGCACAAATAACTAAT...TTCTGCGTTTAATAGATGAAAGCCTTTATTGAGCTCAGAAGCAGATACTGTTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CAA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTGACAGAAGGCTTCTTTaGTATATCCAGTACAGTCTA +
Preference number: 5 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFDRRLL*YIQYSL
Trigger: TAGACTGTACTGGATATACAAAAGAAGCCTTCTGTC...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CAA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTTTTTGTATTTCTATGTaGCAATCCAGTTTGGGCGTT +
Preference number: 5 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFFCISM*QSSLGV
Trigger: AACGCCCAAACTGGATTGCAACATAGAAATACAAAA...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
36% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CAA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTTTGATTTCGGCGATATaGTTCTTTTCGTTGCAAACA +
Preference number: 5 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFLISAI*FFSLQT
Trigger: TGTTTGCAACGAAAAGAACAATATCGCCGAAATCAA...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
36% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CAA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAAAATTTCACCTGTCTCTaGTACTCTTGGTTTCACTTT +
Preference number: 5 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKNFTCL*YSWFHF
Trigger: AAAGTGAAACCAAGAGTACAAGAGACAGGTGAAATT...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CAA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAATTTCACCTGTCTCTaGTACTCTTGGTTTCACTTT +
Preference number: 5 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFNFTCL*YSWFHF
Trigger: AAAGTGAAACCAAGAGTACAAGAGACAGGTGAAATT...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CAA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAAGTGAAAGTCAAATaGGAGACTGACAATCTGGTT +
Preference number: 5 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFKVKVK*ETDNLV
Trigger: AACCAGATTGTCAGTCTCCAATTTGACTTTCACTTT...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CAA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAAAAAGTGAAAGTCAAATaGGAGACTGACAATCTGGTT +
Preference number: 5 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKKVKVK*ETDNLV
Trigger: AACCAGATTGTCAGTCTCCAATTTGACTTTCACTTT...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
36% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CAA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAATCTGAGTTCACCAAGTaGGAAACTGTCATTATGAAA +
Preference number: 5 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKSEFTK*ETVIMK
Trigger: TTTCATAATGACAGTTTCCAACTTGGTGAACTCAGA...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395898.3
ENST00000645819.1
CDS-3UTR CAA 90 bp TTATTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTCTTTATTCCCTTCAGTaGCATCAATTTGTACCAAGA +
Preference number: 5 (lower is better)
Translates to: LFVVNPTTMKSSDGGESFLYSLQ*HQFVPR
Trigger: TCTTGGTACAAATTGATGCAACTGAAGGGAATAAAG...AAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395898.3
ENST00000645819.1
ENST00000649766.1
CDS-3UTR CAA 90 bp ACCATAATACACTTTAGAAAACTTGTCTTCAGCACTACTAAAAACCCACTACACCTTTATTCCCTTCAGTaGCATCAATTTGTACCAAGA +
Preference number: 5 (lower is better)
Translates to: TIIHFRKLVFSTTKNPLHLYSLQ*HQFVPR
Trigger: TCTTGGTACAAATTGATGCAACTGAAGGGAATAAAG...GTGTAGTGGGTTTTTAGTAGTGCTGAAGACAAGTTTTCTAAAGTGTATTATGGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR CAA 90 bp TTTGTAGTCAATCCCACTACTATGAAAAGTTCAGATGGAGGTGAGAGTTTTAAAGAATTTAACAATACTTaGCAAAAGCCCTTTACCCAG +
Preference number: 5 (lower is better)
Translates to: FVVNPTTMKSSDGGESFKEFNNT*QKPFTQ
Trigger: CTGGGTAAAGGGCTTTTGCAAAGTATTGTTAAATTC...TTTAAAACTCTCACCTCCATCTGAACTTTTCATAGTAGTGGGATTGACTACAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS-3UTR CAA 90 bp ACCATAATACACTTTAGAAAACTTGTCTTCAGCACTACTAAAAACCCACTACACTTAGTTATTAGGCTATaGTGCTTCAAGCCATTGACA +
Preference number: 5 (lower is better)
Translates to: TIIHFRKLVFSTTKNPLHLVIRL*CFKPLT
Trigger: TGTCAATGGCTTGAAGCACAATAGCCTAATAACTAA...GTGTAGTGGGTTTTTAGTAGTGCTGAAGACAAGTTTTCTAAAGTGTATTATGGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645819.1
CDS TCA 72 bp CAAGGAGAGGGAGGAGCCGGAACCGCCCGGCGCAGCTaGGGGCTGCGACCAGCGCTGCAAATGACAGCCCCT +
Preference number: 6 (lower is better)
Translates to: QGEGGAGTARRS*GLRPALQMTAP
Trigger: AGGGGCTGTCATTTGCAGCGCTGGTCGCAGCCCTCAGCTGCGCCGGGCGGTTCCGGCTCCTCCCTCTCCTTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249837.7
CDS TCA 72 bp AGTCCGCGACCACCGACTCCAGCACCATGGTGGCGCTaGGGCACAAGGAGAGGGAGGAGCCGGAACCGCCCG +
Preference number: 6 (lower is better)
Translates to: SPRPPTPAPWWR*GTRRGRSRNRP
Trigger: CGGGCGGTTCCGGCTCCTCCCTCTCCTTGTGCCTCAGCGCCACCATGGTGCTGGAGTCGGTGGTCGCGGACT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249837.7
ENST00000395898.3
ENST00000644861.2
ENST00000645819.1
CDS GCA 72 bp CTGGGCAAGATCTTTCACACTTGTGGCAGCCCTTTCTaGAGCCTGGGCAGTGGCAGCACTCAGAGACTCTTT +
Preference number: 6 (lower is better)
Translates to: LGKIFHTCGSPF*SLGSGSTQRLF
Trigger: AAAGAGTCTCTGAGTGCTGCCACTGCCCAGGCTGCAGAAAGGGCTGCCACAAGTGTGAAAGATCTTGCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249837.7
ENST00000395898.3
ENST00000644861.2
ENST00000645819.1
CDS CCA 72 bp AGCTTTGACAGCGATACTTCTGGACTCCCCCACAAGTaGTTTCAGCTCGGATTCCTTCTCAGAAGAGGAAGG +
Preference number: 6 (lower is better)
Translates to: SFDSDTSGLPHK*FQLGFLLRRGR
Trigger: CCTTCCTCTTCTGAGAAGGAATCCGAGCTGAAACCACTTGTGGGGGAGTCCAGAAGTATCGCTGTCAAAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000249837.7
ENST00000395898.3
ENST00000644861.2
ENST00000645819.1
ENST00000650094.1
CDS TCA 72 bp AGAGTTACTTTCTCCTTGCACTTACAGCATCATAGATaGCCTCCACAGGCTGGGACTGAACAATCAGAGTCT +
Preference number: 6 (lower is better)
Translates to: RVTFSLHLQHHR*PPQAGTEQSES
Trigger: AGACTCTGATTGTTCAGTCCCAGCCTGTGGAGGTCATCTATGATGCTGTAAGTGCAAGGAGAAAGTAACTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561258.1
CDS GCA 72 bp CTTGAAACATCAACTTTTCTCACTCTTACAGTCTCCTaGACAGACTGTGTAGGGCTTGGTTGTGAGGAAGCT +
Preference number: 6 (lower is better)
Translates to: LETSTFLTLTVS*TDCVGLGCEEA
Trigger: AGCTTCCTCACAACCAAGCCCTACACAGTCTGTGCAGGAGACTGTAAGAGTGAGAAAAGTTGATGTTTCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249837.7
ENST00000395898.3
ENST00000644861.2
ENST00000645819.1
CDS CCA 72 bp TGGGTGCAACAGCTGAATATCAGGATGGTAGATGCCTaGCTGGATCACTGTCCTATAAAGTGTAAGCTTTGT +
Preference number: 6 (lower is better)
Translates to: WVQQLNIRMVDA*LDHCPIKCKLC
Trigger: ACAAAGCTTACACTTTATAGGACAGTGATCCAGCCAGGCATCTACCATCCTGATATTCAGCTGTTGCACCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000249837.7
ENST00000395898.3
ENST00000558088.1
ENST00000644861.2
ENST00000645819.1
CDS CCA 72 bp GGACATATCAGCATAGGCCTCTCCTTCTGTGGCATCTaGATAAAGAGTCAGTTGGAACCTAAAGACTTCATC +
Preference number: 6 (lower is better)
Translates to: GHISIGLSFCGI*IKSQLEPKDFI
Trigger: GATGAAGTCTTTAGGTTCCAACTGACTCTTTATCCAGATGCCACAGAAGGAGAGGCCTATGCTGATATGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000249837.7
ENST00000395898.3
ENST00000644861.2
ENST00000645819.1
ENST00000650094.1
CDS CAA 72 bp ATACAGCCAACATTCAGAGACAGCACACCATCCACTTaGGACATGTCAGTATACAAATCCCCCTCAGTAGCA +
Preference number: 6 (lower is better)
Translates to: IQPTFRDSTPST*DMSVYKSPSVA
Trigger: TGCTACTGAGGGGGATTTGTATACTGACATGTCCAAAGTGGATGGTGTGCTGTCTCTGAATGTTGGCTGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000249837.7
ENST00000395898.3
ENST00000644861.2
ENST00000645819.1
CDS CAA 90 bp ATCAGCATAGGCCTCTCCTTCTGTGGCATCTGGATAAAGAGTCAGTaGGAACCTAAAGACTTCATCTCCCAAAATAGAGACAGCCTTTTT +
Preference number: 6 (lower is better)
Translates to: ISIGLSFCGIWIKSQ*EPKDFISQNRDSLF
Trigger: AAAAAGGCTGTCTCTATTTTGGGAGATGAAGTCTTTAGGTTCCAACTGACTCTTTATCCAGATGCCACAGAAGGAGAGGCCTATGCTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249837.7
ENST00000395898.3
ENST00000644861.2
ENST00000645819.1
ENST00000650094.1
CDS TCA 72 bp AGGAGCAATTCCTATATCAGATGGGAGGATGGTATATaGATTCTTTGGGCCCTTTCAGAGGCTAAGAGTCTA +
Preference number: 6 (lower is better)
Translates to: RSNSYIRWEDGI*ILWALSEAKSL
Trigger: TAGACTCTTAGCCTCTGAAAGGGCCCAAAGAATTCATATACCATCCTCCCATCTGATATAGGAATTGCTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558338.1
CDS TCA 72 bp TCCATGGGTTGCAATATATGCATAGTTGATGGATGCTaGAATCGACACTTTTTCCAGGTTTCCTCTGCTCTT +
Preference number: 6 (lower is better)
Translates to: SMGCNICIVDGC*NRHFFQVSSAL
Trigger: AAGAGCAGAGGAAACCTGGAAAAAGTGTCGATTTCAGCATCCATCAACTATGCATATATTGCAACCCATGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000249837.7
ENST00000395898.3
ENST00000644861.2
ENST00000645819.1
CDS CCA 72 bp TCAAGATGTCCTTTAATTTCCACAACAGGCACCTTGTaGTACCAAGATGCAGCTAGATTCCGATTTACAAGA +
Preference number: 6 (lower is better)
Translates to: SRCPLISTTGTL*YQDAARFRFTR
Trigger: TCTTGTAAATCGGAATCTAGCTGCATCTTGGTACCACAAGGTGCCTGTTGTGGAAATTAAAGGACATCTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000249837.7
ENST00000395898.3
ENST00000558088.1
ENST00000644861.2
ENST00000645819.1
CDS CAA 72 bp GAATCAAGATGTCCTTTAATTTCCACAACAGGCACCTaGTGGTACCAAGATGCAGCTAGATTCCGATTTACA +
Preference number: 6 (lower is better)
Translates to: ESRCPLISTTGT*WYQDAARFRFT
Trigger: TGTAAATCGGAATCTAGCTGCATCTTGGTACCACAAGGTGCCTGTTGTGGAAATTAAAGGACATCTTGATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000249837.7
ENST00000395898.3
ENST00000558088.1
ENST00000644861.2
ENST00000645819.1
CDS TCA 72 bp AGGGGTTCGTCAGTCACATTAGAAGAGTTAATAATGTaGAGAGGTTCCCCTTTAGAGTCAGTGAAATCAAAG +
Preference number: 6 (lower is better)
Translates to: RGSSVTLEELIM*RGSPLESVKSK
Trigger: CTTTGATTTCACTGACTCTAAAGGGGAACCTCTTCACATTATTAACTCTTCTAATGTGACTGACGAACCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000249837.7
ENST00000395898.3
ENST00000644861.2
ENST00000645819.1
ENST00000650094.1
CDS TCA 72 bp CCAATCTTCTTGTTCTTTGAGATGGTCAGGTACACTTaGAACATCAACTTTTCTCACTCTTACAGTCTCCTG +
Preference number: 6 (lower is better)
Translates to: PIFLFFEMVRYT*NINFSHSYSLL
Trigger: CAGGAGACTGTAAGAGTGAGAAAAGTTGATGTTTCAAGTGTACCTGACCATCTCAAAGAACAAGAAGATTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249837.7
ENST00000395898.3
ENST00000644861.2
ENST00000645819.1
CDS GCA 72 bp TCACCAATTGAAGCCACAAGTGATGGCACAATATCCTaGTGTCTCAAACCTGTTATATACCAGTGTTCTAAT +
Preference number: 6 (lower is better)
Translates to: SPIEATSDGTIS*CLKPVIYQCSN
Trigger: ATTAGAACACTGGTATATAACAGGTTTGAGACAGCAGGATATTGTGCCATCACTTGTGGCTTCAATTGGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000249837.7
ENST00000395898.3
ENST00000561258.1
ENST00000644861.2
ENST00000645819.1
CDS TCA 72 bp TTCTGCATAAGGATTCATGTAGAGTTTTGCAGAGGCTaGTATTGGCTGGAAAATGTATTGATAATTTGGGGG +
Preference number: 6 (lower is better)
Translates to: FCIRIHVEFCRG*YWLENVLIIWG
Trigger: CCCCCAAATTATCAATACATTTTCCAGCCAATATCAGCCTCTGCAAAACTCTACATGAATCCTTATGCAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249837.7
ENST00000395898.3
ENST00000644861.2
ENST00000645819.1
CDS TCA 72 bp GTCAGAAATTCTCACATGCATCAAAGGAAGTCCTCCTaGCACTTTAAATCTGGCCATTCTAATGTCTTTTTC +
Preference number: 6 (lower is better)
Translates to: VRNSHMHQRKSS*HFKSGHSNVFF
Trigger: GAAAAAGACATTAGAATGGCCAGATTTAAAGTGTCAGGAGGACTTCCTTTGATGCATGTGAGAATTTCTGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000249837.7
ENST00000395898.3
ENST00000644861.2
ENST00000645819.1
CDS TCA 72 bp TTCAAATTAATATCCATCAAAAGGCGGAAACTCTTTTaGGCCAAGTCTTTCATGCTGGAAGCAGCTCTTTCT +
Preference number: 6 (lower is better)
Translates to: FKLISIKRRKLF*AKSFMLEAALS
Trigger: AGAAAGAGCTGCTTCCAGCATGAAAGACTTGGCTCAAAAGAGTTTCCGCCTTTTGATGGATATTAATTTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000249837.7
ENST00000395898.3
ENST00000644861.2
ENST00000645819.1
ENST00000650094.1
CDS TCA 72 bp AAGCTAGCCTGCAAAATAGTTCTTGACAGCTTCAACTaGGTGAGTTCGATGTTCATTTTATCAATGACTGGA +
Preference number: 6 (lower is better)
Translates to: KLACKIVLDSFN*VSSMFILSMTG
Trigger: TCCAGTCATTGATAAAATGAACATCGAACTCACTCAGTTGAAGCTGTCAAGAACTATTTTGCAGGCTAGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000249837.7
ENST00000395898.3
ENST00000644861.2
ENST00000645819.1
ENST00000650094.1
CDS GCA 72 bp GGTGGAAATAGAAGACTGTGGGATGACTATAACCGGTaGTTTCAAATCAATATTGATGGAAACACGAAAACT +
Preference number: 6 (lower is better)
Translates to: GGNRRLWDDYNR*FQINIDGNTKT
Trigger: AGTTTTCGTGTTTCCATCAATATTGATTTGAAAGCACCGGTTATAGTCATCCCACAGTCTTCTATTTCCACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249837.7
ENST00000395898.3
ENST00000644861.2
ENST00000645819.1
CDS GCA 72 bp ACTATAATATCTTTAAGTCTGGCAAACACATCAGTCTaGTTAGGCTTCACAGAAATAGAGGCATCCATTCCA +
Preference number: 6 (lower is better)
Translates to: TIISLSLANTSV*LGFTEIEASIP
Trigger: TGGAATGGATGCCTCTATTTCTGTGAAGCCTAAGCAGACTGATGTGTTTGCCAGACTTAAAGATATTATAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000249837.7
ENST00000395898.3
ENST00000644861.2
ENST00000645819.1
ENST00000650094.1
CDS TCA 72 bp AACATGAATATCCATGGGTTGCAATATATGCATAGTTaGTGGATGCTGAAATCGACACTTTTTCCAGGTTTC +
Preference number: 6 (lower is better)
Translates to: NMNIHGLQYMHS*WMLKSTLFPGF
Trigger: GAAACCTGGAAAAAGTGTCGATTTCAGCATCCATCAACTATGCATATATTGCAACCCATGGATATTCATGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000249837.7
ENST00000395898.3
ENST00000644861.2
ENST00000645819.1
CDS CCA 72 bp TACCTCCTTAGCAACACTTATGCTTTGATCATCAGATaGAATAATGGTTGTGAGGTAATTAATAGAAGCGAC +
Preference number: 6 (lower is better)
Translates to: YLLSNTYALIIR*NNGCEVINRSD
Trigger: GTCGCTTCTATTAATTACCTCACAACCATTATTCCATCTGATGATCAAAGCATAAGTGTTGCTAAGGAGGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249837.7
ENST00000395898.3
ENST00000644861.2
ENST00000645819.1
CDS CAA 90 bp ATATTGTTCTTTTCGTTGCAAACAATGACACAGAAAGCATTCAACTaGGCAAATAGCCTGAAATCAATAATGTCACTATCTCTGGAGGAT +
Preference number: 6 (lower is better)
Translates to: ILFFSLQTMTQKAFN*ANSLKSIMSLSLED
Trigger: ATCCTCCAGAGATAGTGACATTATTGATTTCAGGCTATTTGCCAAGTTGAATGCTTTCTGTGTCATTGTTTGCAACGAAAAGAACAATAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249837.7
ENST00000395898.3
ENST00000644861.2
ENST00000645819.1
CDS TCA 72 bp TTACTCCATGACCACATCTGTGTATACCTTCTTATATaGACTTCAAGAACAGAATCAATTGCATATTTCCAC +
Preference number: 6 (lower is better)
Translates to: LLHDHICVYLLI*TSRTESIAYFH
Trigger: GTGGAAATATGCAATTGATTCTGTTCTTGAAGTTCATATAAGAAGGTATACACAGATGTGGTCATGGAGTAA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249837.7
ENST00000395898.3
ENST00000644861.2
ENST00000645819.1
CDS CAA 72 bp TTTTCGTTGCAAACAATGACACAGAAAGCATTCAACTaGGCAAATAGCCTGAAATCAATAATGTCACTATCT +
Preference number: 6 (lower is better)
Translates to: FSLQTMTQKAFN*ANSLKSIMSLS
Trigger: AGATAGTGACATTATTGATTTCAGGCTATTTGCCAAGTTGAATGCTTTCTGTGTCATTGTTTGCAACGAAAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249837.7
ENST00000395898.3
ENST00000644861.2
ENST00000645819.1