Pregenerated sensors for VPS13B-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000253948Ensembl transcript IDs: ENST00000521696.1, ENST00000653552.1, ENST00000661471.1, ENST00000663007.1, ENST00000664437.1, ENST00000664472.1
Found 55 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CAGGAGCAGCACTGCCGGCGGGGGCGGGTGCCAGGGACTTGGAGGTaGAGGGGACGCGGCGGTACTCTGGCGTGTGAGCCGAGGGTGGAG | + |
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Preference number: 5 (lower is better) Translates to: QEQHCRRGRVPGTWR*RGRGGTLACEPRVE Trigger: CTCCACCCTCGGCTCACACGCCAGAGTACCGCCGCGTCCCCTCCACCTCCAAGTCCCTGGCACCCGCCCCCGCCGGCAGTGCTGCTCCTG 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000653552.1 |
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| CDS CCA 90 bp | GCGGTACAGGAGCAGCACTGCCGGCGGGGGCGGGTGCCAGGGACTTaGAGGTGGAGGGGACGCGGCGGTACTCTGGCGTGTGAGCCGAGG | + |
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Preference number: 5 (lower is better) Translates to: AVQEQHCRRGRVPGT*RWRGRGGTLACEPR Trigger: CCTCGGCTCACACGCCAGAGTACCGCCGCGTCCCCTCCACCTCCAAGTCCCTGGCACCCGCCCCCGCCGGCAGTGCTGCTCCTGTACCGC 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000653552.1 |
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| CDS CCA 90 bp | GCAGATCCGGCTGGGTTCCGGGAAGCGAGGGCCTCGCGGGGTGGCTaGGTTGGTGAAGGGCTACTGCGGCCGAAGGGGAGCCCGCCTCAC | + |
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Preference number: 5 (lower is better) Translates to: ADPAGFREARASRGG*VGEGLLRPKGSPPH Trigger: GTGAGGCGGGCTCCCCTTCGGCCGCAGTAGCCCTTCACCAACCCAGCCACCCCGCGAGGCCCTCGCTTCCCGGAACCCAGCCGGATCTGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000653552.1 |
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| CDS TCA 90 bp | GGCTGGGTTCCGGGAAGCGAGGGCCTCGCGGGGTGGCTGGGTTGGTaGAGGGCTACTGCGGCCGAAGGGGAGCCCGCCTCACTTCATTCT | + |
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Preference number: 5 (lower is better) Translates to: GWVPGSEGLAGWLGW*RATAAEGEPASLHS Trigger: AGAATGAAGTGAGGCGGGCTCCCCTTCGGCCGCAGTAGCCCTTCACCAACCCAGCCACCCCGCGAGGCCCTCGCTTCCCGGAACCCAGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000653552.1 |
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| CDS GCA 90 bp | GGGAAGCGAGGGCCTCGCGGGGTGGCTGGGTTGGTGAAGGGCTACTaGGGCCGAAGGGGAGCCCGCCTCACTTCATTCTTCCACTCTGAG | + |
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Preference number: 5 (lower is better) Translates to: GKRGPRGVAGLVKGY*GRRGARLTSFFHSE Trigger: CTCAGAGTGGAAGAATGAAGTGAGGCGGGCTCCCCTTCGGCCGCAGTAGCCCTTCACCAACCCAGCCACCCCGCGAGGCCCTCGCTTCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000653552.1 |
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| CDS CCA 90 bp | AGAGGGAGCGGGAGCGGGACGGGAGGTCTTCTAGCTTTGGTTCTATaGTGGCAGATCCGGCTGGGTTCCGGGAAGCGAGGGCCTCGCGGG | + |
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Preference number: 5 (lower is better) Translates to: RGSGSGTGGLLALVL*WQIRLGSGKRGPRG Trigger: CCCGCGAGGCCCTCGCTTCCCGGAACCCAGCCGGATCTGCCACCATAGAACCAAAGCTAGAAGACCTCCCGTCCCGCTCCCGCTCCCTCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653552.1 |
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| CDS CCA 90 bp | GGAGGGACAGTTTGTTTTGAGCACCAAGTGGGACACACCCGGAAGTaGCGCGGTACAGGAGCAGCACTGCCGGCGGGGGCGGGTGCCAGG | + |
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Preference number: 5 (lower is better) Translates to: GGTVCFEHQVGHTRK*RGTGAALPAGAGAR Trigger: CCTGGCACCCGCCCCCGCCGGCAGTGCTGCTCCTGTACCGCGCCACTTCCGGGTGTGTCCCACTTGGTGCTCAAAACAAACTGTCCCTCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000653552.1 |
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| CDS GCA 90 bp | GTGCTAGGTGTGGTTTCTTCCTCTGCATCGAACCAGCGACCTGGGTaGCTCCCCACCCAAGACGGACCTCCACATCGGGAACCGCCGCCG | + |
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Preference number: 5 (lower is better) Translates to: VLGVVSSSASNQRPG*LPTQDGPPHREPPP Trigger: CGGCGGCGGTTCCCGATGTGGAGGTCCGTCTTGGGTGGGGAGGCACCCAGGTCGCTGGTTCGATGCAGAGGAAGAAACCACACCTAGCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000521696.1 ENST00000653552.1 ENST00000661471.1 ENST00000663007.1 ENST00000664437.1 ENST00000664472.1 |
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| CDS CCA 90 bp | AGACGTGCTAGGTGTGGTTTCTTCCTCTGCATCGAACCAGCGACCTaGGTGCCTCCCCACCCAAGACGGACCTCCACATCGGGAACCGCC | + |
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Preference number: 5 (lower is better) Translates to: RRARCGFFLCIEPAT*VPPHPRRTSTSGTA Trigger: GGCGGTTCCCGATGTGGAGGTCCGTCTTGGGTGGGGAGGCACCCAGGTCGCTGGTTCGATGCAGAGGAAGAAACCACACCTAGCACGTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661471.1 |
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| CDS CCA 90 bp | TTACGTGCTAGGTGTGGTTTCTTCCTCTGCATCGAACCAGCGACCTaGGTGCCTCCCCACCCAAGACGGACCTCCACATCGGGAACCGCC | + |
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Preference number: 5 (lower is better) Translates to: LRARCGFFLCIEPAT*VPPHPRRTSTSGTA Trigger: GGCGGTTCCCGATGTGGAGGTCCGTCTTGGGTGGGGAGGCACCCAGGTCGCTGGTTCGATGCAGAGGAAGAAACCACACCTAGCACGTAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000521696.1 ENST00000653552.1 ENST00000663007.1 ENST00000664437.1 ENST00000664472.1 |
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| CDS TCA 90 bp | CAAGAGTTCTCCTTCACGAAGACGCGCAGAGTAGCTTCTCCAGCCTaGGAAATCCGGTCCGGCTGCGTAGAGTGGCAGCCGTGGAGGGAC | + |
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Preference number: 5 (lower is better) Translates to: QEFSFTKTRRVASPA*EIRSGCVEWQPWRD Trigger: GTCCCTCCACGGCTGCCACTCTACGCAGCCGGACCGGATTTCTCAGGCTGGAGAAGCTACTCTGCGCGTCTTCGTGAAGGAGAACTCTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653552.1 |
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| CDS GCA 90 bp | TCTGTTTCTAAGAGGAGGCGAACGGCCGCTTTGGTGGGGACTTACTaGTTTCGGCCTGAGATAACGAACGCTCTTTCCTTCACTCTACCG | + |
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Preference number: 5 (lower is better) Translates to: SVSKRRRTAALVGTY*FRPEITNALSFTLP Trigger: CGGTAGAGTGAAGGAAAGAGCGTTCGTTATCTCAGGCCGAAAGCAGTAAGTCCCCACCAAAGCGGCCGTTCGCCTCCTCTTAGAAACAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653552.1 |
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| CDS GCA 90 bp | ACCAGAGTCTGCATAGTGGGTACCTTCAGTCTGAGAGGTTCCTTTTaGTGTAATATCTTGTTGTTGTACTTGGCCTATAGTCTTTGCGTG | + |
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Preference number: 5 (lower is better) Translates to: TRVCIVGTFSLRGSF*CNILLLYLAYSLCV Trigger: CACGCAAAGACTATAGGCCAAGTACAACAACAAGATATTACAGCAAAAGGAACCTCTCAGACTGAAGGTACCCACTATGCAGACTCTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000653552.1 ENST00000661471.1 ENST00000663007.1 |
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| CDS TCA 90 bp | TATAGCTCACATCAGTGCACATTGATGTATCTCTCTGGCAAGAACTaGAAGATACAGTTCTTAAATCCCCTGCTGACCCATTATCCATGG | + |
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Preference number: 5 (lower is better) Translates to: YSSHQCTLMYLSGKN*KIQFLNPLLTHYPW Trigger: CCATGGATAATGGGTCAGCAGGGGATTTAAGAACTGTATCTTTCAGTTCTTGCCAGAGAGATACATCAATGTGCACTGATGTGAGCTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000653552.1 ENST00000661471.1 ENST00000663007.1 ENST00000664437.1 |
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| CDS GCA 90 bp | TTTGCTGTAATATCTTGTTGTTGTACTTGGCCTATAGTCTTTGCGTaGATCTTTTTCCATAAAAGAAGACGTGCTAGGTGTGGTTTCTTC | + |
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Preference number: 5 (lower is better) Translates to: FAVISCCCTWPIVFA*IFFHKRRRARCGFF Trigger: GAAGAAACCACACCTAGCACGTCTTCTTTTATGGAAAAAGATGCACGCAAAGACTATAGGCCAAGTACAACAACAAGATATTACAGCAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000661471.1 |
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| CDS GCA 90 bp | TATCCCTTTAACTCAGTGATTCCACTAGAGAAACTCAAACACATCTaGAGAAAGATACATGGGCAGGAATATTCTCTGAAATATTGTTTG | + |
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Preference number: 5 (lower is better) Translates to: YPFNSVIPLEKLKHI*RKIHGQEYSLKYCL Trigger: CAAACAATATTTCAGAGAATATTCCTGCCCATGTATCTTTCTGCAGATGTGTTTGAGTTTCTCTAGTGGAATCACTGAGTTAAAGGGATA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000653552.1 ENST00000661471.1 ENST00000664437.1 |
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| CDS CCA 72 bp | CACTGCCGGCGGGGGCGGGTGCCAGGGACTTGGAGGTaGAGGGGACGCGGCGGTACTCTGGCGTGTGAGCCG | + |
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Preference number: 6 (lower is better) Translates to: HCRRGRVPGTWR*RGRGGTLACEP Trigger: CGGCTCACACGCCAGAGTACCGCCGCGTCCCCTCCACCTCCAAGTCCCTGGCACCCGCCCCCGCCGGCAGTG 75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000653552.1 |
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| CDS CCA 72 bp | GAGCAGCACTGCCGGCGGGGGCGGGTGCCAGGGACTTaGAGGTGGAGGGGACGCGGCGGTACTCTGGCGTGT | + |
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Preference number: 6 (lower is better) Translates to: EQHCRRGRVPGT*RWRGRGGTLAC Trigger: ACACGCCAGAGTACCGCCGCGTCCCCTCCACCTCCAAGTCCCTGGCACCCGCCCCCGCCGGCAGTGCTGCTC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000653552.1 |
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| CDS CAA 72 bp | GGTTCCGGGAAGCGAGGGCCTCGCGGGGTGGCTGGGTaGGTGAAGGGCTACTGCGGCCGAAGGGGAGCCCGC | + |
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Preference number: 6 (lower is better) Translates to: GSGKRGPRGVAG*VKGYCGRRGAR Trigger: GCGGGCTCCCCTTCGGCCGCAGTAGCCCTTCACCAACCCAGCCACCCCGCGAGGCCCTCGCTTCCCGGAACC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000653552.1 |
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| CDS CCA 72 bp | GCTGGGTTCCGGGAAGCGAGGGCCTCGCGGGGTGGCTaGGTTGGTGAAGGGCTACTGCGGCCGAAGGGGAGC | + |
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Preference number: 6 (lower is better) Translates to: AGFREARASRGG*VGEGLLRPKGS Trigger: GCTCCCCTTCGGCCGCAGTAGCCCTTCACCAACCCAGCCACCCCGCGAGGCCCTCGCTTCCCGGAACCCAGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000653552.1 |
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| CDS CAA 90 bp | ATCCGGCTGGGTTCCGGGAAGCGAGGGCCTCGCGGGGTGGCTGGGTaGGTGAAGGGCTACTGCGGCCGAAGGGGAGCCCGCCTCACTTCA | + |
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Preference number: 6 (lower is better) Translates to: IRLGSGKRGPRGVAG*VKGYCGRRGARLTS Trigger: TGAAGTGAGGCGGGCTCCCCTTCGGCCGCAGTAGCCCTTCACCAACCCAGCCACCCCGCGAGGCCCTCGCTTCCCGGAACCCAGCCGGAT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000653552.1 |
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| CDS CCA 72 bp | CAGGGACTTGGAGGTGGAGGGGACGCGGCGGTACTCTaGCGTGTGAGCCGAGGGTGGAGTGCAGAGGGAGCG | + |
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Preference number: 6 (lower is better) Translates to: QGLGGGGDAAVL*RVSRGWSAEGA Trigger: CGCTCCCTCTGCACTCCACCCTCGGCTCACACGCCAGAGTACCGCCGCGTCCCCTCCACCTCCAAGTCCCTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653552.1 |
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| CDS GCA 72 bp | GGGCCTCGCGGGGTGGCTGGGTTGGTGAAGGGCTACTaGGGCCGAAGGGGAGCCCGCCTCACTTCATTCTTC | + |
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Preference number: 6 (lower is better) Translates to: GPRGVAGLVKGY*GRRGARLTSFF Trigger: GAAGAATGAAGTGAGGCGGGCTCCCCTTCGGCCGCAGTAGCCCTTCACCAACCCAGCCACCCCGCGAGGCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000653552.1 |
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| CDS CCA 72 bp | GTTTGTTTTGAGCACCAAGTGGGACACACCCGGAAGTaGCGCGGTACAGGAGCAGCACTGCCGGCGGGGGCG | + |
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Preference number: 6 (lower is better) Translates to: VCFEHQVGHTRK*RGTGAALPAGA Trigger: CGCCCCCGCCGGCAGTGCTGCTCCTGTACCGCGCCACTTCCGGGTGTGTCCCACTTGGTGCTCAAAACAAAC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000653552.1 |
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| CDS CAA 90 bp | GTGGAGTGCAGAGGGAGCGGGAGCGGGACGGGAGGTCTTCTAGCTTaGGTTCTATGGTGGCAGATCCGGCTGGGTTCCGGGAAGCGAGGG | + |
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Preference number: 6 (lower is better) Translates to: VECRGSGSGTGGLLA*VLWWQIRLGSGKRG Trigger: CCCTCGCTTCCCGGAACCCAGCCGGATCTGCCACCATAGAACCAAAGCTAGAAGACCTCCCGTCCCGCTCCCGCTCCCTCTGCACTCCAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653552.1 |
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| CDS TCA 72 bp | TCCTTCACGAAGACGCGCAGAGTAGCTTCTCCAGCCTaGGAAATCCGGTCCGGCTGCGTAGAGTGGCAGCCG | + |
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Preference number: 6 (lower is better) Translates to: SFTKTRRVASPA*EIRSGCVEWQP Trigger: CGGCTGCCACTCTACGCAGCCGGACCGGATTTCTCAGGCTGGAGAAGCTACTCTGCGCGTCTTCGTGAAGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653552.1 |
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| CDS GCA 72 bp | GTGGTTTCTTCCTCTGCATCGAACCAGCGACCTGGGTaGCTCCCCACCCAAGACGGACCTCCACATCGGGAA | + |
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Preference number: 6 (lower is better) Translates to: VVSSSASNQRPG*LPTQDGPPHRE Trigger: TTCCCGATGTGGAGGTCCGTCTTGGGTGGGGAGGCACCCAGGTCGCTGGTTCGATGCAGAGGAAGAAACCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000521696.1 ENST00000653552.1 ENST00000661471.1 ENST00000663007.1 ENST00000664437.1 ENST00000664472.1 |
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| CDS CCA 72 bp | AGGTGTGGTTTCTTCCTCTGCATCGAACCAGCGACCTaGGTGCCTCCCCACCCAAGACGGACCTCCACATCG | + |
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Preference number: 6 (lower is better) Translates to: RCGFFLCIEPAT*VPPHPRRTSTS Trigger: CGATGTGGAGGTCCGTCTTGGGTGGGGAGGCACCCAGGTCGCTGGTTCGATGCAGAGGAAGAAACCACACCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000521696.1 ENST00000653552.1 ENST00000661471.1 ENST00000663007.1 ENST00000664437.1 ENST00000664472.1 |
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| CDS CCA 72 bp | GCAGCCGTGGAGGGACAGTTTGTTTTGAGCACCAAGTaGGACACACCCGGAAGTGGCGCGGTACAGGAGCAG | + |
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Preference number: 6 (lower is better) Translates to: AAVEGQFVLSTK*DTPGSGAVQEQ Trigger: CTGCTCCTGTACCGCGCCACTTCCGGGTGTGTCCCACTTGGTGCTCAAAACAAACTGTCCCTCCACGGCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653552.1 |
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| CDS TCA 72 bp | CCGAAGGGGAGCCCGCCTCACTTCATTCTTCCACTCTaGGGGACCCGCTCTCTTCTGGTCACTACGTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: PKGSPPHFILPL*GTRSLLVTTSS Trigger: GGAAGACGTAGTGACCAGAAGAGAGCGGGTCCCTCAGAGTGGAAGAATGAAGTGAGGCGGGCTCCCCTTCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000653552.1 |
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| CDS GCA 72 bp | TTCAGGGCTTTACGTGCTAGGTGTGGTTTCTTCCTCTaGATCGAACCAGCGACCTGGGTGCCTCCCCACCCA | + |
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Preference number: 6 (lower is better) Translates to: FRALRARCGFFL*IEPATWVPPHP Trigger: TGGGTGGGGAGGCACCCAGGTCGCTGGTTCGATGCAGAGGAAGAAACCACACCTAGCACGTAAAGCCCTGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000521696.1 ENST00000653552.1 ENST00000663007.1 ENST00000664437.1 ENST00000664472.1 |
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| CDS TCA 72 bp | AACGGCCGCTTTGGTGGGGACTTACTGCTTTCGGCCTaGGATAACGAACGCTCTTTCCTTCACTCTACCGCC | + |
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Preference number: 6 (lower is better) Translates to: NGRFGGDLLLSA*DNERSFLHSTA Trigger: GGCGGTAGAGTGAAGGAAAGAGCGTTCGTTATCTCAGGCCGAAAGCAGTAAGTCCCCACCAAAGCGGCCGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653552.1 |
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| CDS GCA 72 bp | AAGAGGAGGCGAACGGCCGCTTTGGTGGGGACTTACTaGTTTCGGCCTGAGATAACGAACGCTCTTTCCTTC | + |
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Preference number: 6 (lower is better) Translates to: KRRRTAALVGTY*FRPEITNALSF Trigger: GAAGGAAAGAGCGTTCGTTATCTCAGGCCGAAAGCAGTAAGTCCCCACCAAAGCGGCCGTTCGCCTCCTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653552.1 |
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| CDS GCA 72 bp | CATAAAAGAAGACGTGCTAGGTGTGGTTTCTTCCTCTaGATCGAACCAGCGACCTGGGTGCCTCCCCACCCA | + |
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Preference number: 6 (lower is better) Translates to: HKRRRARCGFFL*IEPATWVPPHP Trigger: TGGGTGGGGAGGCACCCAGGTCGCTGGTTCGATGCAGAGGAAGAAACCACACCTAGCACGTCTTCTTTTATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000661471.1 |
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| CDS CAA 72 bp | CTCTTCTGGTCACTACGTCTTCCTCCCTCACTTCGCTaGGCGAAGGGTGTTGTACTTGTGAGGAAGTCGCAG | + |
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Preference number: 6 (lower is better) Translates to: LFWSLRLPPSLR*AKGVVLVRKSQ Trigger: CTGCGACTTCCTCACAAGTACAACACCCTTCGCCAAGCGAAGTGAGGGAGGAAGACGTAGTGACCAGAAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653552.1 |
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| CDS CAA 90 bp | CCGCTGGAGTTTTTCTCTGTTTCTAAGAGGAGGCGAACGGCCGCTTaGGTGGGGACTTACTGCTTTCGGCCTGAGATAACGAACGCTCTT | + |
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Preference number: 6 (lower is better) Translates to: PLEFFSVSKRRRTAA*VGTYCFRPEITNAL Trigger: AAGAGCGTTCGTTATCTCAGGCCGAAAGCAGTAAGTCCCCACCAAAGCGGCCGTTCGCCTCCTCTTAGAAACAGAGAAAAACTCCAGCGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000653552.1 |
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| CDS CAA 72 bp | TTTTTCTCTGTTTCTAAGAGGAGGCGAACGGCCGCTTaGGTGGGGACTTACTGCTTTCGGCCTGAGATAACG | + |
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Preference number: 6 (lower is better) Translates to: FFSVSKRRRTAA*VGTYCFRPEIT Trigger: CGTTATCTCAGGCCGAAAGCAGTAAGTCCCCACCAAAGCGGCCGTTCGCCTCCTCTTAGAAACAGAGAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000653552.1 |
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| CDS GCA 72 bp | CCTTTAGTCCCGTATCTTCATAAAAGCAGCTTAGAGTaGCTGAAGGGTTTTGAGGGTTCTGCAAGGTGTGTC | + |
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Preference number: 6 (lower is better) Translates to: PLVPYLHKSSLE*LKGFEGSARCV Trigger: GACACACCTTGCAGAACCCTCAAAACCCTTCAGGCACTCTAAGCTGCTTTTATGAAGATACGGGACTAAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000653552.1 ENST00000661471.1 ENST00000663007.1 ENST00000664437.1 |
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| CDS TCA 72 bp | CATCAGTGCACATTGATGTATCTCTCTGGCAAGAACTaGAAGATACAGTTCTTAAATCCCCTGCTGACCCAT | + |
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Preference number: 6 (lower is better) Translates to: HQCTLMYLSGKN*KIQFLNPLLTH Trigger: ATGGGTCAGCAGGGGATTTAAGAACTGTATCTTTCAGTTCTTGCCAGAGAGATACATCAATGTGCACTGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000653552.1 ENST00000661471.1 ENST00000663007.1 ENST00000664437.1 |
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| CDS GCA 72 bp | TTGCATTTTAACAGGAGACAGGTGGGTTCTTATATTTaGTTCCGTTGTGATACTGCATGTCATGTAGCCTCT | + |
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Preference number: 6 (lower is better) Translates to: LHFNRRQVGSYI*FRCDTACHVAS Trigger: AGAGGCTACATGACATGCAGTATCACAACGGAAGCAAATATAAGAACCCACCTGTCTCCTGTTAAAATGCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000521696.1 ENST00000664472.1 |
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| CDS GCA 72 bp | TGCATAGTGGGTACCTTCAGTCTGAGAGGTTCCTTTTaGTGTAATATCTTGTTGTTGTACTTGGCCTATAGT | + |
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Preference number: 6 (lower is better) Translates to: CIVGTFSLRGSF*CNILLLYLAYS Trigger: ACTATAGGCCAAGTACAACAACAAGATATTACAGCAAAAGGAACCTCTCAGACTGAAGGTACCCACTATGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000653552.1 ENST00000661471.1 ENST00000663007.1 |
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| CDS CAA 72 bp | ACCTTCAGTCTGAGAGGTTCCTTTTGCTGTAATATCTaGTTGTTGTACTTGGCCTATAGTCTTTGCGTGCAT | + |
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Preference number: 6 (lower is better) Translates to: TFSLRGSFCCNI*LLYLAYSLCVH Trigger: ATGCACGCAAAGACTATAGGCCAAGTACAACAACAAGATATTACAGCAAAAGGAACCTCTCAGACTGAAGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000653552.1 ENST00000661471.1 ENST00000663007.1 |
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| CDS CAA 72 bp | AGACCTCGGCAATGTTTACCATGTGGCACTGTGTTTTaGCAACATCACATATTGACAGTGCTGTGTTGTAAA | + |
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Preference number: 6 (lower is better) Translates to: RPRQCLPCGTVF*QHHILTVLCCK Trigger: TTTACAACACAGCACTGTCAATATGTGATGTTGCAAAAACACAGTGCCACATGGTAAACATTGCCGAGGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000653552.1 ENST00000661471.1 ENST00000663007.1 ENST00000664437.1 |
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| CDS CAA 90 bp | ATAGTGGGTACCTTCAGTCTGAGAGGTTCCTTTTGCTGTAATATCTaGTTGTTGTACTTGGCCTATAGTCTTTGCGTGCATCTTTTTCCA | + |
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Preference number: 6 (lower is better) Translates to: IVGTFSLRGSFCCNI*LLYLAYSLCVHLFP Trigger: TGGAAAAAGATGCACGCAAAGACTATAGGCCAAGTACAACAACAAGATATTACAGCAAAAGGAACCTCTCAGACTGAAGGTACCCACTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000653552.1 ENST00000661471.1 ENST00000663007.1 |
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| CDS CAA 72 bp | ATCTTCAGTCTGAGAGGTTCCTTTTGCTGTAATATCTaGTTGTTGTACTTGGCCTATAGTCTTTGCGTGCAT | + |
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Preference number: 6 (lower is better) Translates to: IFSLRGSFCCNI*LLYLAYSLCVH Trigger: ATGCACGCAAAGACTATAGGCCAAGTACAACAACAAGATATTACAGCAAAAGGAACCTCTCAGACTGAAGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664437.1 |
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| CDS GCA 72 bp | AACTCAGTGATTCCACTAGAGAAACTCAAACACATCTaGAGAAAGATACATGGGCAGGAATATTCTCTGAAA | + |
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Preference number: 6 (lower is better) Translates to: NSVIPLEKLKHI*RKIHGQEYSLK Trigger: TTTCAGAGAATATTCCTGCCCATGTATCTTTCTGCAGATGTGTTTGAGTTTCTCTAGTGGAATCACTGAGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000653552.1 ENST00000661471.1 ENST00000664437.1 |
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| CDS GCA 72 bp | ATATCTTGTTGTTGTACTTGGCCTATAGTCTTTGCGTaGATCTTTTTCCATAAAAGAAGACGTGCTAGGTGT | + |
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Preference number: 6 (lower is better) Translates to: ISCCCTWPIVFA*IFFHKRRRARC Trigger: ACACCTAGCACGTCTTCTTTTATGGAAAAAGATGCACGCAAAGACTATAGGCCAAGTACAACAACAAGATAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000661471.1 |
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| CDS CCA 72 bp | ATACAGTTCTTAAATCCCCTGCTGACCCATTATCCATaGATCATTGACAAGATAGAATGTAATAGCTCCTGT | + |
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Preference number: 6 (lower is better) Translates to: IQFLNPLLTHYP*IIDKIECNSSC Trigger: ACAGGAGCTATTACATTCTATCTTGTCAATGATCCATGGATAATGGGTCAGCAGGGGATTTAAGAACTGTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000653552.1 ENST00000661471.1 ENST00000663007.1 ENST00000664437.1 |
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| CDS CAA 72 bp | AGTCTGAGAGGTTCCTTTTGCTGTAATATCTTGTTGTaGTACTTGGCCTATAGTCTTTGCGTGCATCTTTTT | + |
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Preference number: 6 (lower is better) Translates to: SLRGSFCCNILL*YLAYSLCVHLF Trigger: AAAAAGATGCACGCAAAGACTATAGGCCAAGTACAACAACAAGATATTACAGCAAAAGGAACCTCTCAGACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000653552.1 ENST00000661471.1 ENST00000663007.1 ENST00000664437.1 |
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| CDS CAA 90 bp | ATTAAGAACATCTTCAGTCTGAGAGGTTCCTTTTGCTGTAATATCTaGTTGTTGTACTTGGCCTATAGTCTTTGCGTGCATCTTTTTCCA | + |
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Preference number: 6 (lower is better) Translates to: IKNIFSLRGSFCCNI*LLYLAYSLCVHLFP Trigger: TGGAAAAAGATGCACGCAAAGACTATAGGCCAAGTACAACAACAAGATATTACAGCAAAAGGAACCTCTCAGACTGAAGATGTTCTTAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000664437.1 |
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| CDS CCA 72 bp | GAGGTTCCTTTTGCTGTAATATCTTGTTGTTGTACTTaGCCTATAGTCTTTGCGTGCATCTTTTTCCATAAA | + |
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Preference number: 6 (lower is better) Translates to: EVPFAVISCCCT*PIVFACIFFHK Trigger: TTTATGGAAAAAGATGCACGCAAAGACTATAGGCCAAGTACAACAACAAGATATTACAGCAAAAGGAACCTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000653552.1 ENST00000661471.1 ENST00000663007.1 ENST00000664437.1 |
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| CDS CAA 90 bp | TTTATTCACAGACCTCGGCAATGTTTACCATGTGGCACTGTGTTTTaGCAACATCACATATTGACAGTGCTGTGTTGTAAATTTCATAAT | + |
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Preference number: 6 (lower is better) Translates to: FIHRPRQCLPCGTVF*QHHILTVLCCKFHN Trigger: ATTATGAAATTTACAACACAGCACTGTCAATATGTGATGTTGCAAAAACACAGTGCCACATGGTAAACATTGCCGAGGTCTGTGAATAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000653552.1 ENST00000661471.1 ENST00000663007.1 ENST00000664437.1 |
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| CDS GCA 72 bp | CTTATTAAGAACATCTTCAGTCTGAGAGGTTCCTTTTaGTGTAATATCTTGTTGTTGTACTTGGCCTATAGT | + |
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Preference number: 6 (lower is better) Translates to: LIKNIFSLRGSF*CNILLLYLAYS Trigger: ACTATAGGCCAAGTACAACAACAAGATATTACAGCAAAAGGAACCTCTCAGACTGAAGATGTTCTTAATAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664437.1 |
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| CDS CCA 72 bp | ATCTCAGTAAGAATATGGGCAAGTGAATCAGATATTTaGCCTAGACCAGTGAAATTAAAGATACATATCCCT | + |
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Preference number: 6 (lower is better) Translates to: ISVRIWASESDI*PRPVKLKIHIP Trigger: AGGGATATGTATCTTTAATTTCACTGGTCTAGGCCAAATATCTGATTCACTTGCCCATATTCTTACTGAGAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000653552.1 ENST00000661471.1 ENST00000664437.1 |
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| CDS CCA 72 bp | TGTTTCTCTACTCTAAAAGTTATTTCATTTGTGAACTaGGTCATAAAGAGTCATAAGCTCTCAGAGGGATTT | + |
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Preference number: 6 (lower is better) Translates to: CFSTLKVISFVN*VIKSHKLSEGF Trigger: AAATCCCTCTGAGAGCTTATGACTCTTTATGACCCAGTTCACAAATGAAATAACTTTTAGAGTAGAGAAACA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000653552.1 ENST00000661471.1 ENST00000663007.1 ENST00000664437.1 |
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