RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for VPS13A (Homo sapiens)

Ensembl gene IDs: ENSG00000197969

Ensembl transcript IDs: ENST00000355766.5, ENST00000360280.8, ENST00000376636.7, ENST00000376646.3, ENST00000419472.1, ENST00000423463.6, ENST00000467124.1, ENST00000471439.1, ENST00000484581.6, ENST00000493341.1, ENST00000643348.1, ENST00000645632.1

Found 882 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GTAGCTCTTAAAACTGTGGGTCCCTCTAGTCTAGAGACAAGGAAGTaGTGGGAGGAGGTGATGAGTAAACGAGTGGCAGGGAAAGGAGAG +
Preference number: 1 (lower is better)
Translates to: VALKTVGPSSLETRK*WEEVMSKRVAGKGE
Trigger: CTCTCCTTTCCCTGCCACTCGTTTACTCATCACCTCCTCCCATCACTTCCTTGTCTCTAGACTAGAGGGACCCACAGTTTTAAGAGCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360280.8
3UTR GCA 90 bp GAAGAAGTGCTAAGCATCTCTAGACTTCCTGAGTTGTGGATCTGCTaGTCCTTATCTAAGGTCAGGCTCCACACAATCCAGACTCTTCCA +
Preference number: 1 (lower is better)
Translates to: EEVLSISRLPELWIC*SLSKVRLHTIQTLP
Trigger: TGGAAGAGTCTGGATTGTGTGGAGCCTGACCTTAGATAAGGAGCAGCAGATCCACAACTCAGGAAGTCTAGAGATGCTTAGCACTTCTTC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360280.8
3UTR GCA 90 bp CCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATTaGTGTGTGTCTTCAGGCAGTGTTCTCTGTCAGAGGCTCGGAGAA +
Preference number: 1 (lower is better)
Translates to: PKQVLEGSLGAVITY*CVSSGSVLCQRLGE
Trigger: TTCTCCGAGCCTCTGACAGAGAACACTGCCTGAAGACACACAGCAATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467124.1
3UTR CCA 90 bp ATGAGTAAACGAGTGGCAGGGAAAGGAGAGATTTCACGGTTCTTATaGCAAGGGAACAGGAAAGACAGGCACTATCCTTTCCATGTGGAT +
Preference number: 1 (lower is better)
Translates to: MSKRVAGKGEISRFL*QGNRKDRHYPFHVD
Trigger: ATCCACATGGAAAGGATAGTGCCTGTCTTTCCTGTTCCCTTGCCATAAGAACCGTGAAATCTCTCCTTTCCCTGCCACTCGTTTACTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360280.8
3UTR CCA 90 bp CACTCAAAAGAAGAAGTGCTAAGCATCTCTAGACTTCCTGAGTTGTaGATCTGCTGCTCCTTATCTAAGGTCAGGCTCCACACAATCCAG +
Preference number: 1 (lower is better)
Translates to: HSKEEVLSISRLPEL*ICCSLSKVRLHTIQ
Trigger: CTGGATTGTGTGGAGCCTGACCTTAGATAAGGAGCAGCAGATCCACAACTCAGGAAGTCTAGAGATGCTTAGCACTTCTTCTTTTGAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360280.8
3UTR TCA 90 bp AGCAATGCCCTGGAAGCCGAAAAGATTCCTCTGAACTGTGTTGGCTaGGCCATGAAAGCATCCACTGTCAATGTATTTGGTACACACTTT +
Preference number: 1 (lower is better)
Translates to: SNALEAEKIPLNCVG*AMKASTVNVFGTHF
Trigger: AAAGTGTGTACCAAATACATTGACAGTGGATGCTTTCATGGCTCAGCCAACACAGTTCAGAGGAATCTTTTCGGCTTCCAGGGCATTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360280.8
3UTR GCA 90 bp AAAGAAGAAGTGCTAAGCATCTCTAGACTTCCTGAGTTGTGGATCTaGTGCTCCTTATCTAAGGTCAGGCTCCACACAATCCAGACTCTT +
Preference number: 1 (lower is better)
Translates to: KEEVLSISRLPELWI*CSLSKVRLHTIQTL
Trigger: AAGAGTCTGGATTGTGTGGAGCCTGACCTTAGATAAGGAGCAGCAGATCCACAACTCAGGAAGTCTAGAGATGCTTAGCACTTCTTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360280.8
3UTR CCA 90 bp AACAAGCAATGCCCTGGAAGCCGAAAAGATTCCTCTGAACTGTGTTaGCTGAGCCATGAAAGCATCCACTGTCAATGTATTTGGTACACA +
Preference number: 1 (lower is better)
Translates to: NKQCPGSRKDSSELC*LSHESIHCQCIWYT
Trigger: TGTGTACCAAATACATTGACAGTGGATGCTTTCATGGCTCAGCCAACACAGTTCAGAGGAATCTTTTCGGCTTCCAGGGCATTGCTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360280.8
3UTR TCA 90 bp TCTAGTCCCTTCCCCACACCATGGCTCAATTGTCTTTCTAAAAACTaGTCACACCCTTTGGAAACTGGCAGACAGAATGTGATCACTAAC +
Preference number: 1 (lower is better)
Translates to: SSPFPTPWLNCLSKN*SHPLETGRQNVITN
Trigger: GTTAGTGATCACATTCTGTCTGCCAGTTTCCAAAGGGTGTGATCAGTTTTTAGAAAGACAATTGAGCCATGGTGTGGGGAAGGGACTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419472.1
3UTR CCA 90 bp AAGTACCAGAAATCAAAGTCACTCTTTCTGATTATGATTTTCTGGTaGAGAGTTGGCAGGGAACAGGCACTCTGCCTTAGTCCTCACACA +
Preference number: 1 (lower is better)
Translates to: KYQKSKSLFLIMIFW*RVGREQALCLSPHT
Trigger: TGTGTGAGGACTAAGGCAGAGTGCCTGTTCCCTGCCAACTCTCCACCAGAAAATCATAATCAGAAAGAGTGACTTTGATTTCTGGTACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360280.8
3UTR GCA 90 bp GGTTTCTACAGCAGTGCCTGTGGTGTAGGCCTCAAGAAAGACATTTaGAACAGTCTGCAGAAATTCTACGCTTGCACAAATATACATTTC +
Preference number: 1 (lower is better)
Translates to: GFYSSACGVGLKKDI*NSLQKFYACTNIHF
Trigger: GAAATGTATATTTGTGCAAGCGTAGAATTTCTGCAGACTGTTGCAAATGTCTTTCTTGAGGCCTACACCACAGGCACTGCTGTAGAAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493341.1
3UTR TCA 90 bp GCAACAGTCTGCAGAAATTCTACGCTTGCACAAATATACATTTCTTaGAAGACCGCATCAGTCACACAACCATCTCTGACTTTCCTGTAC +
Preference number: 1 (lower is better)
Translates to: ATVCRNSTLAQIYIS*KTASVTQPSLTFLY
Trigger: GTACAGGAAAGTCAGAGATGGTTGTGTGACTGATGCGGTCTTTCAAGAAATGTATATTTGTGCAAGCGTAGAATTTCTGCAGACTGTTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493341.1
3UTR CCA 90 bp GAATGGTGTGAAGCATTAGTAGTAACTCCACTAGTGGCACTGTATTaGTCTTTTGTTACAGCAGGTGAGGCACTACCATCTTTTTCATAC +
Preference number: 1 (lower is better)
Translates to: EWCEALVVTPLVALY*SFVTAGEALPSFSY
Trigger: GTATGAAAAAGATGGTAGTGCCTCACCTGCTGTAACAAAAGACCAATACAGTGCCACTAGTGGAGTTACTACTAATGCTTCACACCATTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493341.1
3UTR TCA 90 bp AGTAACTCCACTAGTGGCACTGTATTGGTCTTTTGTTACAGCAGGTaGGGCACTACCATCTTTTTCATACCATATATTGCCATGCAATGT +
Preference number: 1 (lower is better)
Translates to: SNSTSGTVLVFCYSR*GTTIFFIPYIAMQC
Trigger: ACATTGCATGGCAATATATGGTATGAAAAAGATGGTAGTGCCTCACCTGCTGTAACAAAAGACCAATACAGTGCCACTAGTGGAGTTACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493341.1
3UTR TCA 90 bp CTGAGCCATGAAAGCATCCACTGTCAATGTATTTGGTACACACTTTaGGCTTCTACAGGCAAACTAATCAAGTATTTTGTCCCAATCTTT +
Preference number: 1 (lower is better)
Translates to: LSHESIHCQCIWYTL*ASTGKLIKYFVPIF
Trigger: AAAGATTGGGACAAAATACTTGATTAGTTTGCCTGTAGAAGCTCAAAGTGTGTACCAAATACATTGACAGTGGATGCTTTCATGGCTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360280.8
3UTR CCA 90 bp AGTGAGGTTTGTAATAGAGTAGGATTCTGCATCTTCTCAATGTGCTaGCCTTGCTTTTTGGATAGTCCTGAAACAAATACTACTTTAGAC +
Preference number: 1 (lower is better)
Translates to: SEVCNRVGFCIFSMC*PCFLDSPETNTTLD
Trigger: GTCTAAAGTAGTATTTGTTTCAGGACTATCCAAAAAGCAAGGCCAGCACATTGAGAAGATGCAGAATCCTACTCTATTACAAACCTCACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360280.8
3UTR TCA 90 bp AATGGTGAAATCATAACATTGGGTAATGAAGTATTTCGTTTTGGATaGGGACAGTCTGATGCAAGCTTTCTGACTACCTCTACTGTTAAG +
Preference number: 1 (lower is better)
Translates to: NGEIITLGNEVFRFG*GQSDASFLTTSTVK
Trigger: CTTAACAGTAGAGGTAGTCAGAAAGCTTGCATCAGACTGTCCTCATCCAAAACGAAATACTTCATTACCCAATGTTATGATTTCACCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360280.8
3UTR GCA 90 bp ATGAGTGAGGTTTGTAATAGAGTAGGATTCTGCATCTTCTCAATGTaGTGGCCTTGCTTTTTGGATAGTCCTGAAACAAATACTACTTTA +
Preference number: 1 (lower is better)
Translates to: MSEVCNRVGFCIFSM*WPCFLDSPETNTTL
Trigger: TAAAGTAGTATTTGTTTCAGGACTATCCAAAAAGCAAGGCCAGCACATTGAGAAGATGCAGAATCCTACTCTATTACAAACCTCACTCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360280.8
3UTR GCA 90 bp TCCAATCACTGTTTATATTATTACGTCATATGTATCTCTCCAAACTaGTCATTTCCCTCGACCCTCCCTTCTATTATCTTAGTTCATGTC +
Preference number: 1 (lower is better)
Translates to: SNHCLYYYVICISPN*SFPSTLPSIILVHV
Trigger: GACATGAACTAAGATAATAGAAGGGAGGGTCGAGGGAAATGAGCAGTTTGGAGAGATACATATGACGTAATAATATAAACAGTGATTGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419472.1
3UTR GCA 90 bp GTTTGTAATAGAGTAGGATTCTGCATCTTCTCAATGTGCTGGCCTTaGTTTTTGGATAGTCCTGAAACAAATACTACTTTAGACCAATTA +
Preference number: 1 (lower is better)
Translates to: VCNRVGFCIFSMCWP*FLDSPETNTTLDQL
Trigger: TAATTGGTCTAAAGTAGTATTTGTTTCAGGACTATCCAAAAAGCAAGGCCAGCACATTGAGAAGATGCAGAATCCTACTCTATTACAAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360280.8
3UTR TCA 90 bp ACCTCTAAACCACAGAAACAACATGACACTGGTATAGCCTATATATaGTTACTAGTTACCTACAGCATAATCCAGGTTTTAAAAAGTCGA +
Preference number: 1 (lower is better)
Translates to: TSKPQKQHDTGIAYI*LLVTYSIIQVLKSR
Trigger: TCGACTTTTTAAAACCTGGATTATGCTGTAGGTAACTAGTAATCATATATAGGCTATACCAGTGTCATGTTGTTTCTGTGGTTTAGAGGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645632.1
3UTR-3UTR TCA 90 bp CTAAGGTCAGGCTCCACACAATCCAGACTCTTCCAACAATCACTGGATGGCCGGCCGAAAAGATTCCTCTaGACTGTGTTGGCTGAGCCA +
Preference number: 2 (lower is better)
Translates to: LRSGSTQSRLFQQSLDGRPKRFL*TVLAEP
Trigger: TGGCTCAGCCAACACAGTTCAGAGGAATCTTTTCGG...CCGGCCATCCAGTGATTGTTGGAAGAGTCTGGATTGTGTGGAGCCTGACCTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360280.8
3UTR-3UTR GCA 90 bp CTAAGGTCAGGCTCCACACAATCCAGACTCTTCCAACAATCACTGGATGGCCGGAGGGAACAGGCACTCTaGCTTAGTCCTCACACAATT +
Preference number: 2 (lower is better)
Translates to: LRSGSTQSRLFQQSLDGRREQAL*LSPHTI
Trigger: AATTGTGTGAGGACTAAGGCAGAGTGCCTGTTCCCT...CCGGCCATCCAGTGATTGTTGGAAGAGTCTGGATTGTGTGGAGCCTGACCTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360280.8
3UTR-3UTR CCA 90 bp CTAAGGTCAGGCTCCACACAATCCAGACTCTTCCAACAATCACTGGATGGCCGGTGTGGAGATGAATTATaGGCAGCCTCTCCACCATTA +
Preference number: 2 (lower is better)
Translates to: LRSGSTQSRLFQQSLDGRCGDEL*AASPPL
Trigger: TAATGGTGGAGAGGCTGCCCATAATTCATCTCCACA...CCGGCCATCCAGTGATTGTTGGAAGAGTCTGGATTGTGTGGAGCCTGACCTTAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360280.8
3UTR-3UTR TCA 90 bp CTAAGGTCAGGCTCCACACAATCCAGACTCTTCCAACAATCACTGGATGGCCGGCTGATGCAAGCTTTCTaGCTACCTCTACTGTTAAGT +
Preference number: 2 (lower is better)
Translates to: LRSGSTQSRLFQQSLDGRLMQAF*LPLLLS
Trigger: ACTTAACAGTAGAGGTAGTCAGAAAGCTTGCATCAG...CCGGCCATCCAGTGATTGTTGGAAGAGTCTGGATTGTGTGGAGCCTGACCTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360280.8
3UTR-3UTR CCA 90 bp CTAAGGTCAGGCTCCACACAATCCAGACTCTTCCAACAATCACTGGATGGCCGGACTATCCTTTCCATGTaGATTAGTCACAAGACCCAC +
Preference number: 2 (lower is better)
Translates to: LRSGSTQSRLFQQSLDGRTILSM*ISHKTH
Trigger: GTGGGTCTTGTGACTAATCCACATGGAAAGGATAGT...CCGGCCATCCAGTGATTGTTGGAAGAGTCTGGATTGTGTGGAGCCTGACCTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360280.8
3UTR-3UTR CCA 90 bp CTAAGGTCAGGCTCCACACAATCCAGACTCTTCCAACAATCACTGGATGGCCGGATTTCACGGTTCTTATaGCAAGGGAACAGGAAAGAC +
Preference number: 2 (lower is better)
Translates to: LRSGSTQSRLFQQSLDGRISRFL*QGNRKD
Trigger: GTCTTTCCTGTTCCCTTGCCATAAGAACCGTGAAAT...CCGGCCATCCAGTGATTGTTGGAAGAGTCTGGATTGTGTGGAGCCTGACCTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360280.8
3UTR-3UTR TCA 90 bp TTCCTCCAAAAGAGACATGTATCAGAAAAGTGTAAACGGCTGGGTGTACTGGCTAGCGGGAGGATCACTTaGGCCCAAGAGTTCAAGACA +
Preference number: 2 (lower is better)
Translates to: FLQKRHVSEKCKRLGVLASGRIT*AQEFKT
Trigger: TGTCTTGAACTCTTGGGCTCAAGTGATCCTCCCGCT...AGCCAGTACACCCAGCCGTTTACACTTTTCTGATACATGTCTCTTTTGGAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419472.1
3UTR-3UTR GCA 90 bp TTCCTCCAAAAGAGACATGTATCAGAAAAGTGTAAACGGCTGGGTGTACTGGCTTATCCAGGCATGGCATaGACCTGTAGTCCCAGCTAC +
Preference number: 2 (lower is better)
Translates to: FLQKRHVSEKCKRLGVLAYPGMA*TCSPSY
Trigger: GTAGCTGGGACTACAGGTGCATGCCATGCCTGGATA...AGCCAGTACACCCAGCCGTTTACACTTTTCTGATACATGTCTCTTTTGGAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419472.1
3UTR-3UTR CCA 90 bp ATAAGTAATCCCTACTACCTCCACAATCCCTCATCACCCATTTCCAATCACTGTGTAATTCCAGCACTTTaGGAGGCCGAAGCGGGAGGA +
Preference number: 2 (lower is better)
Translates to: ISNPYYLHNPSSPISNHCVIPAL*EAEAGG
Trigger: TCCTCCCGCTTCGGCCTCCCAAAGTGCTGGAATTAC...ACAGTGATTGGAAATGGGTGATGAGGGATTGTGGAGGTAGTAGGGATTACTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419472.1
3UTR-3UTR CCA 90 bp GACTGGAAGAAACGGGCAGGCTCTCACTTGGAGATCTTTAATGGCAGCAGTCATGTTGCTCCTCCTGAATaGTGTGAAGCATTAGTAGTA +
Preference number: 2 (lower is better)
Translates to: DWKKRAGSHLEIFNGSSHVAPPE*CEALVV
Trigger: TACTACTAATGCTTCACACCATTCAGGAGGAGCAAC...ATGACTGCTGCCATTAAAGATCTCCAAGTGAGAGCCTGCCCGTTTCTTCCAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493341.1
3UTR CAA 90 bp TCTCACTCAAAAGAAGAAGTGCTAAGCATCTCTAGACTTCCTGAGTaGTGGATCTGCTGCTCCTTATCTAAGGTCAGGCTCCACACAATC +
Preference number: 2 (lower is better)
Translates to: SHSKEEVLSISRLPE*WICCSLSKVRLHTI
Trigger: GATTGTGTGGAGCCTGACCTTAGATAAGGAGCAGCAGATCCACAACTCAGGAAGTCTAGAGATGCTTAGCACTTCTTCTTTTGAGTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360280.8
3UTR-3UTR TCA 90 bp TTCCTCCAAAAGAGACATGTATCAGAAAAGTGTAAACGGCTGGGTGTACTGGCTGACTACAGTGAGCTATaGTCGCATCATTGCACTCCA +
Preference number: 2 (lower is better)
Translates to: FLQKRHVSEKCKRLGVLADYSEL*SHHCTP
Trigger: TGGAGTGCAATGATGCGATCATAGCTCACTGTAGTC...AGCCAGTACACCCAGCCGTTTACACTTTTCTGATACATGTCTCTTTTGGAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419472.1
3UTR-3UTR CCA 90 bp AATCCTCAGTCTGATCAATTTCTAAGGGTTCAAGCAAAGGCTCCCATACACCAAGGGCAGGCTCTCACTTaGAGATCTTTAATGGCAGCA +
Preference number: 2 (lower is better)
Translates to: NPQSDQFLRVQAKAPIHQGQALT*RSLMAA
Trigger: TGCTGCCATTAAAGATCTCCAAGTGAGAGCCTGCCC...TTGGTGTATGGGAGCCTTTGCTTGAACCCTTAGAAATTGATCAGACTGAGGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493341.1
3UTR-3UTR CCA 90 bp CAATGTTCATTTTTATCATCTCGCCTTTGGGTACCAATTCAGTTGTGGGAGCTAGCCTTTTCTCTTGACTaGAAGAAACGGGCAGGCTCT +
Preference number: 2 (lower is better)
Translates to: QCSFLSSRLWVPIQLWELAFSLD*KKRAGS
Trigger: AGAGCCTGCCCGTTTCTTCCAGTCAAGAGAAAAGGC...TAGCTCCCACAACTGAATTGGTACCCAAAGGCGAGATGATAAAAATGAACATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493341.1
3UTR-3UTR TCA 90 bp AAGCGTGACTCTCATTTGAATAACTGTAGAGTAAGCAAACCAGAAATTCTCAATGGCTCCATGTGGAGATaGATTATGGGCAGCCTCTCC +
Preference number: 2 (lower is better)
Translates to: KRDSHLNNCRVSKPEILNGSMWR*IMGSLS
Trigger: GGAGAGGCTGCCCATAATTCATCTCCACATGGAGCC...ATTGAGAATTTCTGGTTTGCTTACTCTACAGTTATTCAAATGAGAGTCACGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
3UTR-3UTR TCA 90 bp GCAGGAAGAGGGTCATGGCCATTTAAGCATTTTCAAAGGCAAAGCACAAGAATCAGTAAGTACCACCAATaGCGAGGATACATAAGGTAC +
Preference number: 2 (lower is better)
Translates to: AGRGSWPFKHFQRQSTRISKYHQ*RGYIRY
Trigger: GTACCTTATGTATCCTCGTCATTGGTGGTACTTACT...GATTCTTGTGCTTTGCCTTTGAAAATGCTTAAATGGCCATGACCCTCTTCCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645632.1
3UTR-3UTR CCA 90 bp ATAAGTAATCCCTACTACCTCCACAATCCCTCATCACCCATTTCCAATCACTGTACACCCTTTGGAAACTaGCAGACAGAATGTGATCAC +
Preference number: 2 (lower is better)
Translates to: ISNPYYLHNPSSPISNHCTPFGN*QTECDH
Trigger: GTGATCACATTCTGTCTGCCAGTTTCCAAAGGGTGT...ACAGTGATTGGAAATGGGTGATGAGGGATTGTGGAGGTAGTAGGGATTACTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419472.1
3UTR-3UTR CCA 90 bp CAATGTTCATTTTTATCATCTCGCCTTTGGGTACCAATTCAGTTGTGGGAGCTATCCATGTTTGCACACTaGTTTCTACAGCAGTGCCTG +
Preference number: 2 (lower is better)
Translates to: QCSFLSSRLWVPIQLWELSMFAH*FLQQCL
Trigger: CAGGCACTGCTGTAGAAACCAGTGTGCAAACATGGA...TAGCTCCCACAACTGAATTGGTACCCAAAGGCGAGATGATAAAAATGAACATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493341.1
3UTR CAA 90 bp TGGTTTCTACAGCAGTGCCTGTGGTGTAGGCCTCAAGAAAGACATTaGCAACAGTCTGCAGAAATTCTACGCTTGCACAAATATACATTT +
Preference number: 2 (lower is better)
Translates to: WFLQQCLWCRPQERH*QQSAEILRLHKYTF
Trigger: AAATGTATATTTGTGCAAGCGTAGAATTTCTGCAGACTGTTGCAAATGTCTTTCTTGAGGCCTACACCACAGGCACTGCTGTAGAAACCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493341.1
3UTR-3UTR GCA 90 bp TCCCATAAATGTGCAGTAGAAGAAGCCGTTTCTTCTGGGATGGTTTCCTTAGTTTTAGCAGTCCATGTTTaGACACTGGTTTCTACAGCA +
Preference number: 2 (lower is better)
Translates to: SHKCAVEEAVSSGMVSLVLAVHV*TLVSTA
Trigger: TGCTGTAGAAACCAGTGTGCAAACATGGACTGCTAA...AACTAAGGAAACCATCCCAGAAGAAACGGCTTCTTCTACTGCACATTTATGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493341.1
3UTR-3UTR CCA 90 bp ATGGTGAATCAGCCAAAAGGTAGATGGTGCAGATTCAACGGACTCAAAAGGACAACTGTATGTGCCTTTTaGCTCAGAGAGTATTTTGCA +
Preference number: 2 (lower is better)
Translates to: MVNQPKGRWCRFNGLKRTTVCAF*LREYFA
Trigger: TGCAAAATACTCTCTGAGCCAAAAGGCACATACAGT...TGTCCTTTTGAGTCCGTTGAATCTGCACCATCTACCTTTTGGCTGATTCACCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000360280.8
3UTR-3UTR CCA 90 bp TCCCATAAATGTGCAGTAGAAGAAGCCGTTTCTTCTGGGATGGTTTCCTTAGTTCTAGTGGCACTGTATTaGTCTTTTGTTACAGCAGGT +
Preference number: 2 (lower is better)
Translates to: SHKCAVEEAVSSGMVSLVLVALY*SFVTAG
Trigger: ACCTGCTGTAACAAAAGACCAATACAGTGCCACTAG...AACTAAGGAAACCATCCCAGAAGAAACGGCTTCTTCTACTGCACATTTATGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493341.1
3UTR CAA 90 bp GAAGAAACCACCACCAAAGTTCTCTTGATACCACTGAGGCAATGTTaGATTTCTTACCCATCACTCAGGGAGTTTGAAATAAGCATGACA +
Preference number: 2 (lower is better)
Translates to: EETTTKVLLIPLRQC*ISYPSLREFEISMT
Trigger: TGTCATGCTTATTTCAAACTCCCTGAGTGATGGGTAAGAAATCAAACATTGCCTCAGTGGTATCAAGAGAACTTTGGTGGTGGTTTCTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
3UTR CAA 90 bp TGCAACAGTCTGCAGAAATTCTACGCTTGCACAAATATACATTTCTaGAAAGACCGCATCAGTCACACAACCATCTCTGACTTTCCTGTA +
Preference number: 2 (lower is better)
Translates to: CNSLQKFYACTNIHF*KDRISHTTISDFPV
Trigger: TACAGGAAAGTCAGAGATGGTTGTGTGACTGATGCGGTCTTTCAAGAAATGTATATTTGTGCAAGCGTAGAATTTCTGCAGACTGTTGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493341.1
3UTR CAA 90 bp AGGCCTCAAGAAAGACATTTGCAACAGTCTGCAGAAATTCTACGCTaGCACAAATATACATTTCTTGAAAGACCGCATCAGTCACACAAC +
Preference number: 2 (lower is better)
Translates to: RPQERHLQQSAEILR*HKYTFLERPHQSHN
Trigger: GTTGTGTGACTGATGCGGTCTTTCAAGAAATGTATATTTGTGCAAGCGTAGAATTTCTGCAGACTGTTGCAAATGTCTTTCTTGAGGCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493341.1
3UTR CAA 90 bp TGTTTAGGACCTGGACTATACAGCACCATGGTGAGATCATCAGTTTaGAAGCTTATGTTTAGTGTTGTCTTAACTAGTAAGGCACGTGAA +
Preference number: 2 (lower is better)
Translates to: CLGPGLYSTMVRSSV*KLMFSVVLTSKARE
Trigger: TTCACGTGCCTTACTAGTTAAGACAACACTAAACATAAGCTTCAAAACTGATGATCTCACCATGGTGCTGTATAGTCCAGGTCCTAAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493341.1
3UTR-3UTR CCA 90 bp AGCGAGGGTTTAAGGAGCCTGAGAAGAATTTCACAACTATTGACTATACAGAGTAAATTCTCAATCTATTaGCAACGGGACAGGTTATTG +
Preference number: 2 (lower is better)
Translates to: SEGLRSLRRISQLLTIQSKFSIY*QRDRLL
Trigger: CAATAACCTGTCCCGTTGCCAATAGATTGAGAATTT...ACTCTGTATAGTCAATAGTTGTGAAATTCTTCTCAGGCTCCTTAAACCCTCGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
3UTR-3UTR TCA 90 bp AGACATTTGCAACAGTCTGCAGAAATTCTACGCTTGCACAAATATACATTTCTTTTTTGTTACAGCAGGTaGGGCACTACCATCTTTTTC +
Preference number: 2 (lower is better)
Translates to: RHLQQSAEILRLHKYTFLFCYSR*GTTIFF
Trigger: GAAAAAGATGGTAGTGCCTCACCTGCTGTAACAAAA...AAGAAATGTATATTTGTGCAAGCGTAGAATTTCTGCAGACTGTTGCAAATGTCT
38% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000493341.1
3UTR-3UTR TCA 90 bp AAAGACATTTGCAACAGTCTGCAGAAATTCTACGCTTGCACAAATATACATTTCTCACACAACCATCTCTaGCTTTCCTGTACTTTATAT +
Preference number: 2 (lower is better)
Translates to: KDICNSLQKFYACTNIHFSHNHL*LSCTLY
Trigger: ATATAAAGTACAGGAAAGTCAGAGATGGTTGTGTGA...GAAATGTATATTTGTGCAAGCGTAGAATTTCTGCAGACTGTTGCAAATGTCTTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493341.1
3UTR CCA 72 bp CAGGCTCCACACAATCCAGACTCTTCCAACAATCACTaGATGGCCGGTGCCTCCTGCAGCAGTCTTTCAAGC +
Preference number: 3 (lower is better)
Translates to: QAPHNPDSSNNH*MAGASCSSLSS
Trigger: GCTTGAAAGACTGCTGCAGGAGGCACCGGCCATCCAGTGATTGTTGGAAGAGTCTGGATTGTGTGGAGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360280.8
3UTR CCA 72 bp CTCCACACAATCCAGACTCTTCCAACAATCACTGGATaGCCGGTGCCTCCTGCAGCAGTCTTTCAAGCTTTC +
Preference number: 3 (lower is better)
Translates to: LHTIQTLPTITG*PVPPAAVFQAF
Trigger: GAAAGCTTGAAAGACTGCTGCAGGAGGCACCGGCCATCCAGTGATTGTTGGAAGAGTCTGGATTGTGTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360280.8
3UTR TCA 72 bp AAAACTGTGGGTCCCTCTAGTCTAGAGACAAGGAAGTaGTGGGAGGAGGTGATGAGTAAACGAGTGGCAGGG +
Preference number: 3 (lower is better)
Translates to: KTVGPSSLETRK*WEEVMSKRVAG
Trigger: CCCTGCCACTCGTTTACTCATCACCTCCTCCCATCACTTCCTTGTCTCTAGACTAGAGGGACCCACAGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360280.8
3UTR CCA 72 bp AAGGGAACAGGAAAGACAGGCACTATCCTTTCCATGTaGATTAGTCACAAGACCCACTCCTGCTGGCTGCCA +
Preference number: 3 (lower is better)
Translates to: KGTGKTGTILSM*ISHKTHSCWLP
Trigger: TGGCAGCCAGCAGGAGTGGGTCTTGTGACTAATCCACATGGAAAGGATAGTGCCTGTCTTTCCTGTTCCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360280.8
3UTR CCA 72 bp CGAGTGGCAGGGAAAGGAGAGATTTCACGGTTCTTATaGCAAGGGAACAGGAAAGACAGGCACTATCCTTTC +
Preference number: 3 (lower is better)
Translates to: RVAGKGEISRFL*QGNRKDRHYPF
Trigger: GAAAGGATAGTGCCTGTCTTTCCTGTTCCCTTGCCATAAGAACCGTGAAATCTCTCCTTTCCCTGCCACTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360280.8
3UTR GCA 72 bp CTAAGCATCTCTAGACTTCCTGAGTTGTGGATCTGCTaGTCCTTATCTAAGGTCAGGCTCCACACAATCCAG +
Preference number: 3 (lower is better)
Translates to: LSISRLPELWIC*SLSKVRLHTIQ
Trigger: CTGGATTGTGTGGAGCCTGACCTTAGATAAGGAGCAGCAGATCCACAACTCAGGAAGTCTAGAGATGCTTAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360280.8
3UTR GCA 72 bp GTGCTAAGCATCTCTAGACTTCCTGAGTTGTGGATCTaGTGCTCCTTATCTAAGGTCAGGCTCCACACAATC +
Preference number: 3 (lower is better)
Translates to: VLSISRLPELWI*CSLSKVRLHTI
Trigger: GATTGTGTGGAGCCTGACCTTAGATAAGGAGCAGCAGATCCACAACTCAGGAAGTCTAGAGATGCTTAGCAC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360280.8
3UTR-3UTR CAA 90 bp TTCCTCCAAAAGAGACATGTATCAGAAAAGTGTAAACGGCTGGGTGTACTGGCTGCTATGATCGCATCATaGCACTCCAGTCTGAGCAAC +
Preference number: 3 (lower is better)
Translates to: FLQKRHVSEKCKRLGVLAAMIAS*HSSLSN
Trigger: GTTGCTCAGACTGGAGTGCAATGATGCGATCATAGC...AGCCAGTACACCCAGCCGTTTACACTTTTCTGATACATGTCTCTTTTGGAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419472.1
3UTR TCA 72 bp GAAGGATCACTTGAGCCTAGAAGTTTGAGACTACAGTaGGCTATGATCGCATCATTGCACTCCAGTCTGAGC +
Preference number: 3 (lower is better)
Translates to: EGSLEPRSLRLQ*AMIASLHSSLS
Trigger: GCTCAGACTGGAGTGCAATGATGCGATCATAGCTCACTGTAGTCTCAAACTTCTAGGCTCAAGTGATCCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419472.1
3UTR CCA 72 bp TGCCCTGGAAGCCGAAAAGATTCCTCTGAACTGTGTTaGCTGAGCCATGAAAGCATCCACTGTCAATGTATT +
Preference number: 3 (lower is better)
Translates to: CPGSRKDSSELC*LSHESIHCQCI
Trigger: AATACATTGACAGTGGATGCTTTCATGGCTCAGCCAACACAGTTCAGAGGAATCTTTTCGGCTTCCAGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360280.8
3UTR TCA 72 bp CTGGAAGCCGAAAAGATTCCTCTGAACTGTGTTGGCTaGGCCATGAAAGCATCCACTGTCAATGTATTTGGT +
Preference number: 3 (lower is better)
Translates to: LEAEKIPLNCVG*AMKASTVNVFG
Trigger: ACCAAATACATTGACAGTGGATGCTTTCATGGCTCAGCCAACACAGTTCAGAGGAATCTTTTCGGCTTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360280.8
3UTR GCA 72 bp GGATTTGGGTTGATCCTGACAAAAGGTAACAAGCAATaGCCTGGAAGCCGAAAAGATTCCTCTGAACTGTGT +
Preference number: 3 (lower is better)
Translates to: GFGLILTKGNKQ*PGSRKDSSELC
Trigger: ACACAGTTCAGAGGAATCTTTTCGGCTTCCAGGGCATTGCTTGTTACCTTTTGTCAGGATCAACCCAAATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360280.8
3UTR CCA 72 bp AACAATGGTGGTGGTAGTGCTAGAGTGATAAATAAATaGCAACCCTGTGTCTGGGAGGCACTGTACCAAATC +
Preference number: 3 (lower is better)
Translates to: NNGGGSARVINK*QPCVWEALYQI
Trigger: GATTTGGTACAGTGCCTCCCAGACACAGGGTTGCCATTTATTTATCACTCTAGCACTACCACCACCATTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419472.1
3UTR-3UTR CAA 90 bp ATGCTTCCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATTGCCTTCCCAAACAGGTTTaGGAAGGTAGTCTAGGAGCT +
Preference number: 3 (lower is better)
Translates to: MLPKQVLEGSLGAVITYCLPKQV*EGSLGA
Trigger: AGCTCCTAGACTACCTTCCAAAACCTGTTTGGGAAG...GCAATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGGAAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360280.8
ENST00000376636.7
ENST00000467124.1
3UTR-3UTR CAA 90 bp GACACTACACCCAGGGAGGCAGGGGACTGTAATTTTTCTGAGAATGGTGAAATCACAGTTAATAGTAACTaGGTGGCACATACAACATGC +
Preference number: 3 (lower is better)
Translates to: DTTPREAGDCNFSENGEITVNSN*VAHTTC
Trigger: GCATGTTGTATGTGCCACCAAGTTACTATTAACTGT...GATTTCACCATTCTCAGAAAAATTACAGTCCCCTGCCTCCCTGGGTGTAGTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360280.8
3UTR TCA 72 bp TTCCCCACACCATGGCTCAATTGTCTTTCTAAAAACTaGTCACACCCTTTGGAAACTGGCAGACAGAATGTG +
Preference number: 3 (lower is better)
Translates to: FPTPWLNCLSKN*SHPLETGRQNV
Trigger: CACATTCTGTCTGCCAGTTTCCAAAGGGTGTGATCAGTTTTTAGAAAGACAATTGAGCCATGGTGTGGGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419472.1
3UTR-3UTR CAA 90 bp TTGAAAGACCGCATCAGTCACACAACCATCTCTGACTTTCCTGTACTTTATATCCACTGTATTGGTCTTTaGTTACAGCAGGTGAGGCAC +
Preference number: 3 (lower is better)
Translates to: LKDRISHTTISDFPVLYIHCIGL*LQQVRH
Trigger: GTGCCTCACCTGCTGTAACAAAAGACCAATACAGTG...GATATAAAGTACAGGAAAGTCAGAGATGGTTGTGTGACTGATGCGGTCTTTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493341.1
3UTR-3UTR CAA 90 bp TCCCATAAATGTGCAGTAGAAGAAGCCGTTTCTTCTGGGATGGTTTCCTTAGTTACTAGTGGCACTGTATaGGTCTTTTGTTACAGCAGG +
Preference number: 3 (lower is better)
Translates to: SHKCAVEEAVSSGMVSLVTSGTV*VFCYSR
Trigger: CCTGCTGTAACAAAAGACCAATACAGTGCCACTAGT...AACTAAGGAAACCATCCCAGAAGAAACGGCTTCTTCTACTGCACATTTATGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493341.1
3UTR CCA 72 bp TTTCTCTTGACTGGAAGAAACGGGCAGGCTCTCACTTaGAGATCTTTAATGGCAGCAGTCATTGTACTATTT +
Preference number: 3 (lower is better)
Translates to: FLLTGRNGQALT*RSLMAAVIVLF
Trigger: AAATAGTACAATGACTGCTGCCATTAAAGATCTCCAAGTGAGAGCCTGCCCGTTTCTTCCAGTCAAGAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493341.1
3UTR-3UTR CAA 90 bp GGTACAAAGGCTTCCAACAAATCTAGCAAATCCAGTGCAGAACTAAGAACACCCACTGTTGGCTTTCACTaGCAAAGTCATGCATTAACT +
Preference number: 3 (lower is better)
Translates to: GTKASNKSSKSSAELRTPTVGFH*QSHALT
Trigger: AGTTAATGCATGACTTTGCAAGTGAAAGCCAACAGT...GGGTGTTCTTAGTTCTGCACTGGATTTGCTAGATTTGTTGGAAGCCTTTGTACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645632.1
3UTR-3UTR CAA 90 bp CATCCAGAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGAGCTGTAATCACTTATaGCTGTGTGTCTTCAGGCAG +
Preference number: 3 (lower is better)
Translates to: HPEYRVLEIISVICFPNRSCNHL*LCVFRQ
Trigger: CTGCCTGAAGACACACAGCAATAAGTGATTACAGCT...CCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTCTGGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360280.8
ENST00000376636.7
ENST00000467124.1
3UTR-3UTR CAA 90 bp AATATGCTTCCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATAGCTGTAATCACTTATaGCTGTGTGTCTTCAGGCAG +
Preference number: 3 (lower is better)
Translates to: NMLPKQVLEGSLGAVITYSCNHL*LCVFRQ
Trigger: CTGCCTGAAGACACACAGCAATAAGTGATTACAGCT...ATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGGAAGCATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360280.8
ENST00000376636.7
ENST00000467124.1
3UTR-3UTR CAA 90 bp AAACGGGCAGGCTCTCACTTGGAGATCTTTAATGGCAGCAGTCATTGTACTATTACAAATATACATTTCTaGAAAGACCGCATCAGTCAC +
Preference number: 3 (lower is better)
Translates to: KRAGSHLEIFNGSSHCTITNIHF*KDRISH
Trigger: GTGACTGATGCGGTCTTTCAAGAAATGTATATTTGT...AATAGTACAATGACTGCTGCCATTAAAGATCTCCAAGTGAGAGCCTGCCCGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493341.1
3UTR-3UTR CAA 90 bp AATCCTCAGTCTGATCAATTTCTAAGGGTTCAAGCAAAGGCTCCCATACACCAACCTCAAGAAAGACATTaGCAACAGTCTGCAGAAATT +
Preference number: 3 (lower is better)
Translates to: NPQSDQFLRVQAKAPIHQPQERH*QQSAEI
Trigger: AATTTCTGCAGACTGTTGCAAATGTCTTTCTTGAGG...TTGGTGTATGGGAGCCTTTGCTTGAACCCTTAGAAATTGATCAGACTGAGGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493341.1
3UTR-3UTR CAA 90 bp ACTTGGAGATCTTTAATGGCAGCAGTCATTGTACTATTTTCAAGGTTACCTTTACTTAGCAGTCCATGTTaGCACACTGGTTTCTACAGC +
Preference number: 3 (lower is better)
Translates to: TWRSLMAAVIVLFSRLPLLSSPC*HTGFYS
Trigger: GCTGTAGAAACCAGTGTGCAAACATGGACTGCTAAG...TAAAGGTAACCTTGAAAATAGTACAATGACTGCTGCCATTAAAGATCTCCAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493341.1
3UTR TCA 72 bp TGCAGAAATTCTACGCTTGCACAAATATACATTTCTTaGAAGACCGCATCAGTCACACAACCATCTCTGACT +
Preference number: 3 (lower is better)
Translates to: CRNSTLAQIYIS*KTASVTQPSLT
Trigger: AGTCAGAGATGGTTGTGTGACTGATGCGGTCTTTCAAGAAATGTATATTTGTGCAAGCGTAGAATTTCTGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493341.1
3UTR-3UTR CAA 90 bp CAATGTTCATTTTTATCATCTCGCCTTTGGGTACCAATTCAGTTGTGGGAGCTAAAAACAGTAGTGATTTaGCCTTTTCTCTTGACTGGA +
Preference number: 3 (lower is better)
Translates to: QCSFLSSRLWVPIQLWELKTVVI*PFLLTG
Trigger: TCCAGTCAAGAGAAAAGGCAAAATCACTACTGTTTT...TAGCTCCCACAACTGAATTGGTACCCAAAGGCGAGATGATAAAAATGAACATTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000493341.1
3UTR TCA 72 bp ATCATAACATTGGGTAATGAAGTATTTCGTTTTGGATaGGGACAGTCTGATGCAAGCTTTCTGACTACCTCT +
Preference number: 3 (lower is better)
Translates to: IITLGNEVFRFG*GQSDASFLTTS
Trigger: AGAGGTAGTCAGAAAGCTTGCATCAGACTGTCCTCATCCAAAACGAAATACTTCATTACCCAATGTTATGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360280.8
3UTR GCA 72 bp AGAGTAGGATTCTGCATCTTCTCAATGTGCTGGCCTTaGTTTTTGGATAGTCCTGAAACAAATACTACTTTA +
Preference number: 3 (lower is better)
Translates to: RVGFCIFSMCWP*FLDSPETNTTL
Trigger: TAAAGTAGTATTTGTTTCAGGACTATCCAAAAAGCAAGGCCAGCACATTGAGAAGATGCAGAATCCTACTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360280.8
3UTR GCA 72 bp GTTTGTAATAGAGTAGGATTCTGCATCTTCTCAATGTaGTGGCCTTGCTTTTTGGATAGTCCTGAAACAAAT +
Preference number: 3 (lower is better)
Translates to: VCNRVGFCIFSM*WPCFLDSPETN
Trigger: ATTTGTTTCAGGACTATCCAAAAAGCAAGGCCAGCACATTGAGAAGATGCAGAATCCTACTCTATTACAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360280.8
3UTR TCA 72 bp GAAAGCATCCACTGTCAATGTATTTGGTACACACTTTaGGCTTCTACAGGCAAACTAATCAAGTATTTTGTC +
Preference number: 3 (lower is better)
Translates to: ESIHCQCIWYTL*ASTGKLIKYFV
Trigger: GACAAAATACTTGATTAGTTTGCCTGTAGAAGCTCAAAGTGTGTACCAAATACATTGACAGTGGATGCTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360280.8
3UTR TCA 72 bp TTTCTTGAAAGACCGCATCAGTCACACAACCATCTCTaGCTTTCCTGTACTTTATATCCATCATGTCTTTTT +
Preference number: 3 (lower is better)
Translates to: FLERPHQSHNHL*LSCTLYPSCLF
Trigger: AAAAAGACATGATGGATATAAAGTACAGGAAAGTCAGAGATGGTTGTGTGACTGATGCGGTCTTTCAAGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493341.1
3UTR TCA 72 bp CAGAAATGGTTTAATTGGTTAAGTAAGTACCACCAATaGCGAGGATACATAAGGTACAAAGGCTTCCAACAA +
Preference number: 3 (lower is better)
Translates to: QKWFNWLSKYHQ*RGYIRYKGFQQ
Trigger: TTGTTGGAAGCCTTTGTACCTTATGTATCCTCGTCATTGGTGGTACTTACTTAACCAATTAAACCATTTCTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645632.1
3UTR-3UTR CAA 90 bp AAAGACATTTGCAACAGTCTGCAGAAATTCTACGCTTGCACAAATATACATTTCTCCATCATGTCTTTTTaGTCAAAACCAACTGTCAGT +
Preference number: 3 (lower is better)
Translates to: KDICNSLQKFYACTNIHFSIMSF*SKPTVS
Trigger: ACTGACAGTTGGTTTTGACAAAAAAGACATGATGGA...GAAATGTATATTTGTGCAAGCGTAGAATTTCTGCAGACTGTTGCAAATGTCTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493341.1
3UTR TCA 72 bp CCACAGAAACAACATGACACTGGTATAGCCTATATATaGTTACTAGTTACCTACAGCATAATCCAGGTTTTA +
Preference number: 3 (lower is better)
Translates to: PQKQHDTGIAYI*LLVTYSIIQVL
Trigger: TAAAACCTGGATTATGCTGTAGGTAACTAGTAATCATATATAGGCTATACCAGTGTCATGTTGTTTCTGTGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645632.1
3UTR CCA 72 bp CTGTCTGTTGGAAGCATAATACACTATCTAAGATGTTaGGAATTGTGTTTATTCCATGTTAACAGTGAATGG +
Preference number: 3 (lower is better)
Translates to: LSVGSIIHYLRC*ELCLFHVNSEW
Trigger: CCATTCACTGTTAACATGGAATAAACACAATTCCCAACATCTTAGATAGTGTATTATGCTTCCAACAGACAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CCA 90 bp GAACTAGAAACATTAAACTTGGCTCCATGTGGAGATGAATTATGGGCAGCCTCTAAGTCTGCGCGCGGCTaGAGGCGGAGCGCGGCGCAG +
Preference number: 4 (lower is better)
Translates to: ELETLNLAPCGDELWAASKSARG*RRSAAQ
Trigger: CTGCGCCGCGCTCCGCCTCCAGCCGCGCGCAGACTT...AGAGGCTGCCCATAATTCATCTCCACATGGAGCCAAGTTTAATGTTTCTAGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376636.7
CDS-3UTR CCA 90 bp AGCGAGGGTTTAAGGAGCCTGAGAAGAATTTCACAACTATTGACTATACAGAGTAGCGCGGCGCAGACCTaGGCGCGCAGCCCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: SEGLRSLRRISQLLTIQSSAAQT*ARSPER
Trigger: CCTCTCAGGGCTGCGCGCCCAGGTCTGCGCCGCGCT...ACTCTGTATAGTCAATAGTTGTGAAATTCTTCTCAGGCTCCTTAAACCCTCGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376636.7
CDS-3UTR CCA 90 bp TGTAATATGCTTCCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTGTTCCTCAGCCGTGGTaGGCACGGCAGCCGGCCCGT +
Preference number: 4 (lower is better)
Translates to: CNMLPKQVLEGSLGAVITVPQPW*ARQPAR
Trigger: ACGGGCCGGCTGCCGTGCCCACCACGGCTGAGGAAC...AGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGGAAGCATATTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CCA 90 bp CAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATTGCTGTGTGTCTTCACATGTTCCTCAGCCGTaGTGGGCACGGCAGCCGGCC +
Preference number: 4 (lower is better)
Translates to: QVLEGSLGAVITYCCVSSHVPQP*WARQPA
Trigger: GGCCGGCTGCCGTGCCCACCACGGCTGAGGAACATG...TGAAGACACACAGCAATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CCA 90 bp AACTTGGCTCCATGTGGAGATGAATTATGGGCAGCCTCTCCACCATTACAGAGAATGCCCAGAGAGAGCTaGGACGTGTCCAAGTCCACC +
Preference number: 4 (lower is better)
Translates to: NLAPCGDELWAASPPLQRMPRES*DVSKST
Trigger: GGTGGACTTGGACACGTCCCAGCTCTCTCTGGGCAT...TCTCTGTAATGGTGGAGAGGCTGCCCATAATTCATCTCCACATGGAGCCAAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR GCA 90 bp CATCCAGAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGCGCTCTCACGACGCGTaGGCAAGTCTGCGCGCGGCT +
Preference number: 4 (lower is better)
Translates to: HPEYRVLEIISVICFPNRRSHDA*ASLRAA
Trigger: AGCCGCGCGCAGACTTGCGCACGCGTCGTGAGAGCG...CCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTCTGGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376636.7
CDS-3UTR CCA 90 bp CCAGAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGTTTGTTCCTCAGCCGTGGTaGGCACGGCAGCCGGCCCGT +
Preference number: 4 (lower is better)
Translates to: PEYRVLEIISVICFPNRFVPQPW*ARQPAR
Trigger: ACGGGCCGGCTGCCGTGCCCACCACGGCTGAGGAAC...AAACCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CCA 90 bp CTAAGGTCAGGCTCCACACAATCCAGACTCTTCCAACAATCACTGGATGGCCGGGCATCCCTGAGGATTTaGGTTGATCCTGACAAAAGG +
Preference number: 4 (lower is better)
Translates to: LRSGSTQSRLFQQSLDGRASLRI*VDPDKR
Trigger: CCTTTTGTCAGGATCAACCCAAATCCTCAGGGATGC...CCGGCCATCCAGTGATTGTTGGAAGAGTCTGGATTGTGTGGAGCCTGACCTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS-3UTR CCA 90 bp AACTTGGCTCCATGTGGAGATGAATTATGGGCAGCCTCTCCACCATTACAGAGATCTTCCAACAATCACTaGATGGCCGGTGCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: NLAPCGDELWAASPPLQRSSNNH*MAGASC
Trigger: GCAGGAGGCACCGGCCATCCAGTGATTGTTGGAAGA...TCTCTGTAATGGTGGAGAGGCTGCCCATAATTCATCTCCACATGGAGCCAAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS-3UTR TCA 90 bp CCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATTGCTGTGTGGCCATTCCAGCTGCCTaGACAGTTGCCTCAGCCAAG +
Preference number: 4 (lower is better)
Translates to: PKQVLEGSLGAVITYCCVAIPAA*TVASAK
Trigger: CTTGGCTGAGGCAACTGTTCAGGCAGCTGGAATGGC...CACACAGCAATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR GCA 90 bp GTGATTTTGCCTTTTCTCTTGACTGGAAGAAACGGGCAGGCTCTCACTTGGAGATCAGAAACTGGAGACTaGGGGATGACCACAACTGGG +
Preference number: 4 (lower is better)
Translates to: VILPFLLTGRNGQALTWRSETGD*GMTTTG
Trigger: CCCAGTTGTGGTCATCCCGCAGTCTCCAGTTTCTGA...TCTCCAAGTGAGAGCCTGCCCGTTTCTTCCAGTCAAGAGAAAAGGCAAAATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000493341.1
CDS-3UTR GCA 90 bp AAACTTTATATGAGAGGGACTGTCTGTTGGAAGCATAATACACTATCTAAGATGACGCGTGCGCAAGTCTaGGCGCGGCTGGAGGCGGAG +
Preference number: 4 (lower is better)
Translates to: KLYMRGTVCWKHNTLSKMTRAQV*ARLEAE
Trigger: CTCCGCCTCCAGCCGCGCGCAGACTTGCGCACGCGT...CATCTTAGATAGTGTATTATGCTTCCAACAGACAGTCCCTCTCATATAAAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376636.7
CDS-3UTR GCA 90 bp GTGATTTTGCCTTTTCTCTTGACTGGAAGAAACGGGCAGGCTCTCACTTGGAGAAGGCAGCTGGGCACTTaGAGATTGTTGGCAGCATCA +
Preference number: 4 (lower is better)
Translates to: VILPFLLTGRNGQALTWRRQLGT*RLLAAS
Trigger: TGATGCTGCCAACAATCTGCAAGTGCCCAGCTGCCT...TCTCCAAGTGAGAGCCTGCCCGTTTCTTCCAGTCAAGAGAAAAGGCAAAATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493341.1
CDS-3UTR CCA 90 bp TTGTCTAAGCAGATTCTAACTTCAAACTGTCTATTGTTCCAGATGCTACTTTGTGTTCCTCAGCCGTGGTaGGCACGGCAGCCGGCCCGT +
Preference number: 4 (lower is better)
Translates to: LSKQILTSNCLLFQMLLCVPQPW*ARQPAR
Trigger: ACGGGCCGGCTGCCGTGCCCACCACGGCTGAGGAAC...ACAAAGTAGCATCTGGAACAATAGACAGTTTGAAGTTAGAATCTGCTTAGACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR CCA 90 bp GAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGTTTTGGCATGTTCCTCAGCCGTaGTGGGCACGGCAGCCGGCC +
Preference number: 4 (lower is better)
Translates to: EYRVLEIISVICFPNRFWHVPQP*WARQPA
Trigger: GGCCGGCTGCCGTGCCCACCACGGCTGAGGAACATG...CCAAAACCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CCA 90 bp GGTACAAAGGCTTCCAACAAATCTAGCAAATCCAGTGCAGAACTAAGAACACCCATGCCCAGAGAGAGCTaGGACGTGTCCAAGTCCACC +
Preference number: 4 (lower is better)
Translates to: GTKASNKSSKSSAELRTPMPRES*DVSKST
Trigger: GGTGGACTTGGACACGTCCCAGCTCTCTCTGGGCAT...GGGTGTTCTTAGTTCTGCACTGGATTTGCTAGATTTGTTGGAAGCCTTTGTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR CCA 90 bp CTAAGGTCAGGCTCCACACAATCCAGACTCTTCCAACAATCACTGGATGGCCGGCCACCTGGCATCCTCTaGGGTCTTGAAGTTAATTAT +
Preference number: 4 (lower is better)
Translates to: LRSGSTQSRLFQQSLDGRPPGIL*GLEVNY
Trigger: ATAATTAACTTCAAGACCCCAGAGGATGCCAGGTGG...CCGGCCATCCAGTGATTGTTGGAAGAGTCTGGATTGTGTGGAGCCTGACCTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS-3UTR GCA 90 bp GGTTTCTACAGCAGTGCCTGTGGTGTAGGCCTCAAGAAAGACATTTGCAACAGTAGCTGCCTGAACAGTTaGCTCAGCCAAGGCTTGTTT +
Preference number: 4 (lower is better)
Translates to: GFYSSACGVGLKKDICNSSCLNS*LSQGLF
Trigger: AAACAAGCCTTGGCTGAGGCAACTGTTCAGGCAGCT...ACTGTTGCAAATGTCTTTCTTGAGGCCTACACCACAGGCACTGCTGTAGAAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493341.1
CDS-3UTR GCA 90 bp GCAGGAAGAGGGTCATGGCCATTTAAGCATTTTCAAAGGCAAAGCACAAGAATCAGCAGCCATTCCAGCTaGCTGAACAGTTGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: AGRGSWPFKHFQRQSTRISSHSS*LNSCLS
Trigger: GCTGAGGCAACTGTTCAGGCAGCTGGAATGGCTGCT...GATTCTTGTGCTTTGCCTTTGAAAATGCTTAAATGGCCATGACCCTCTTCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR CCA 90 bp CAGGAAAGACAGGCACTATCCTTTCCATGTGGATTAGTCACAAGACCCACTCCTCTACAGCAGTGCCTGTaGTGTAGGCCTCAAGAAAGA +
Preference number: 4 (lower is better)
Translates to: QERQALSFPCGLVTRPTPLQQCL*CRPQER
Trigger: TCTTTCTTGAGGCCTACACCACAGGCACTGCTGTAG...AGGAGTGGGTCTTGTGACTAATCCACATGGAAAGGATAGTGCCTGTCTTTCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS-3UTR CCA 90 bp AACTTGGCTCCATGTGGAGATGAATTATGGGCAGCCTCTCCACCATTACAGAGACTACAGCAGTGCCTGTaGTGTAGGCCTCAAGAAAGA +
Preference number: 4 (lower is better)
Translates to: NLAPCGDELWAASPPLQRLQQCL*CRPQER
Trigger: TCTTTCTTGAGGCCTACACCACAGGCACTGCTGTAG...TCTCTGTAATGGTGGAGAGGCTGCCCATAATTCATCTCCACATGGAGCCAAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CCA 90 bp GGTTTCTACAGCAGTGCCTGTGGTGTAGGCCTCAAGAAAGACATTTGCAACAGTCTACAGCAGTGCCTGTaGTGTAGGCCTCAAGAAAGA +
Preference number: 4 (lower is better)
Translates to: GFYSSACGVGLKKDICNSLQQCL*CRPQER
Trigger: TCTTTCTTGAGGCCTACACCACAGGCACTGCTGTAG...ACTGTTGCAAATGTCTTTCTTGAGGCCTACACCACAGGCACTGCTGTAGAAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493341.1
CDS-3UTR CCA 90 bp GACACTACACCCAGGGAGGCAGGGGACTGTAATTTTTCTGAGAATGGTGAAATCGGGCAGGCTCTCACTTaGAGATCTTTAATGGCAGCA +
Preference number: 4 (lower is better)
Translates to: DTTPREAGDCNFSENGEIGQALT*RSLMAA
Trigger: TGCTGCCATTAAAGATCTCCAAGTGAGAGCCTGCCC...GATTTCACCATTCTCAGAAAAATTACAGTCCCCTGCCTCCCTGGGTGTAGTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS-3UTR CCA 90 bp AAAGGAAGCCTGTTTAGGACCTGGACTATACAGCACCATGGTGAGATCATCAGTATGAACCTAGAGGGTTaGCCTCAAAAGGCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: KGSLFRTWTIQHHGEIISMNLEG*PQKAAG
Trigger: CCCAGCTGCCTTTTGAGGCCAACCCTCTAGGTTCAT...ACTGATGATCTCACCATGGTGCTGTATAGTCCAGGTCCTAAACAGGCTTCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493341.1
CDS-3UTR TCA 90 bp GCAGGAAGAGGGTCATGGCCATTTAAGCATTTTCAAAGGCAAAGCACAAGAATCTCTCTGGCATGGTGGTaGAGAGGCACATCAGGTTTG +
Preference number: 4 (lower is better)
Translates to: AGRGSWPFKHFQRQSTRISLAWW*RGTSGL
Trigger: CAAACCTGATGTGCCTCTTCACCACCATGCCAGAGA...GATTCTTGTGCTTTGCCTTTGAAAATGCTTAAATGGCCATGACCCTCTTCCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR TCA 90 bp GACACTACACCCAGGGAGGCAGGGGACTGTAATTTTTCTGAGAATGGTGAAATCCTCGTCACCTTTAGATaGCCAAGGTCCAAAAGAAGC +
Preference number: 4 (lower is better)
Translates to: DTTPREAGDCNFSENGEILVTFR*PRSKRS
Trigger: GCTTCTTTTGGACCTTGGTCATCTAAAGGTGACGAG...GATTTCACCATTCTCAGAAAAATTACAGTCCCCTGCCTCCCTGGGTGTAGTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS-3UTR TCA 90 bp GCACGTGAATGTACTTCTACCACAGCAGCTGTCACCACAGTTGCTCCTCCTGAAAATTTCCCACTTCACTaGTTCCTGTGTAGGTACTTC +
Preference number: 4 (lower is better)
Translates to: ARECTSTTAAVTTVAPPENFPLH*FLCRYF
Trigger: GAAGTACCTACACAGGAATCAGTGAAGTGGGAAATT...TTCAGGAGGAGCAACTGTGGTGACAGCTGCTGTGGTAGAAGTACATTCACGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493341.1
CDS-3UTR TCA 90 bp CTAAGGTCAGGCTCCACACAATCCAGACTCTTCCAACAATCACTGGATGGCCGGCTGGCTTCAGAAAAATaGATGATCGGTAAGATCCTA +
Preference number: 4 (lower is better)
Translates to: LRSGSTQSRLFQQSLDGRLASEK*MIGKIL
Trigger: TAGGATCTTACCGATCATTCATTTTTCTGAAGCCAG...CCGGCCATCCAGTGATTGTTGGAAGAGTCTGGATTGTGTGGAGCCTGACCTTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS-3UTR TCA 90 bp GACACTACACCCAGGGAGGCAGGGGACTGTAATTTTTCTGAGAATGGTGAAATCGGTGGATGCTTTCGATaGATTCCGTCTGCTTTGTAC +
Preference number: 4 (lower is better)
Translates to: DTTPREAGDCNFSENGEIGGCFR*IPSALY
Trigger: GTACAAAGCAGACGGAATTCATCGAAAGCATCCACC...GATTTCACCATTCTCAGAAAAATTACAGTCCCCTGCCTCCCTGGGTGTAGTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS-3UTR TCA 90 bp CTAAGGTCAGGCTCCACACAATCCAGACTCTTCCAACAATCACTGGATGGCCGGTTGAATAGTGTCTTATaGCTTCAGACTGTAGATCGG +
Preference number: 4 (lower is better)
Translates to: LRSGSTQSRLFQQSLDGRLNSVL*LQTVDR
Trigger: CCGATCTACAGTCTGAAGTCATAAGACACTATTCAA...CCGGCCATCCAGTGATTGTTGGAAGAGTCTGGATTGTGTGGAGCCTGACCTTAG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS-3UTR TCA 90 bp CAGGAAAGACAGGCACTATCCTTTCCATGTGGATTAGTCACAAGACCCACTCCTTGGATGAGGACAGTCTaGTGCAAGCTTTCTGACTAC +
Preference number: 4 (lower is better)
Translates to: QERQALSFPCGLVTRPTPWMRTV*CKLSDY
Trigger: GTAGTCAGAAAGCTTGCATCAGACTGTCCTCATCCA...AGGAGTGGGTCTTGTGACTAATCCACATGGAAAGGATAGTGCCTGTCTTTCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS-3UTR TCA 90 bp AAATGGCAACCCTGTGTCTGGGAGGCACTGTACCAAATCCTTTACATACACAATAGCGGGAGGATCACTTaGGCCCAAGAGTTCAAGACA +
Preference number: 4 (lower is better)
Translates to: KWQPCVWEALYQILYIHNSGRIT*AQEFKT
Trigger: TGTCTTGAACTCTTGGGCTCAAGTGATCCTCCCGCT...ATTGTGTATGTAAAGGATTTGGTACAGTGCCTCCCAGACACAGGGTTGCCATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419472.1
CDS-3UTR GCA 90 bp CTAAGGTCAGGCTCCACACAATCCAGACTCTTCCAACAATCACTGGATGGCCGGATGGGTACCAAAATATaGTGGGTAGATACACTGAGT +
Preference number: 4 (lower is better)
Translates to: LRSGSTQSRLFQQSLDGRMGTKI*WVDTLS
Trigger: ACTCAGTGTATCTACCCAGCATATTTTGGTACCCAT...CCGGCCATCCAGTGATTGTTGGAAGAGTCTGGATTGTGTGGAGCCTGACCTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS-3UTR GCA 90 bp GTAAGGCACGTGAATGTACTTCTACCACAGCAGCTGTCACCACAGTTGCTCCTCTCTGGAACTCCTTTGTaGGAGTTCTTTTACACCAGT +
Preference number: 4 (lower is better)
Translates to: VRHVNVLLPQQLSPQLLLSGTPL*EFFYTS
Trigger: ACTGGTGTAAAAGAACTCGCACAAAGGAGTTCCAGA...GAGGAGCAACTGTGGTGACAGCTGCTGTGGTAGAAGTACATTCACGTGCCTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493341.1
CDS-3UTR GCA 90 bp GGTACAAAGGCTTCCAACAAATCTAGCAAATCCAGTGCAGAACTAAGAACACCCTCAGAAACTGGAGACTaGGGGATGACCACAACTGGG +
Preference number: 4 (lower is better)
Translates to: GTKASNKSSKSSAELRTPSETGD*GMTTTG
Trigger: CCCAGTTGTGGTCATCCCGCAGTCTCCAGTTTCTGA...GGGTGTTCTTAGTTCTGCACTGGATTTGCTAGATTTGTTGGAAGCCTTTGTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR GCA 90 bp CTAAGGTCAGGCTCCACACAATCCAGACTCTTCCAACAATCACTGGATGGCCGGTCTAACTTCTCAGTGTaGTTTACACTCATTGGCTTC +
Preference number: 4 (lower is better)
Translates to: LRSGSTQSRLFQQSLDGRSNFSV*FTLIGF
Trigger: GAAGCCAATGAGTGTAAAGCACACTGAGAAGTTAGA...CCGGCCATCCAGTGATTGTTGGAAGAGTCTGGATTGTGTGGAGCCTGACCTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS-3UTR GCA 90 bp AACTTGGCTCCATGTGGAGATGAATTATGGGCAGCCTCTCCACCATTACAGAGAGAGTTGTGGATCTGCTaGTCCTTATCTAAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: NLAPCGDELWAASPPLQRELWIC*SLSKVR
Trigger: CCTGACCTTAGATAAGGAGCAGCAGATCCACAACTC...TCTCTGTAATGGTGGAGAGGCTGCCCATAATTCATCTCCACATGGAGCCAAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS-3UTR GCA 90 bp AAATGGCAACCCTGTGTCTGGGAGGCACTGTACCAAATCCTTTACATACACAATTATCCAGGCATGGCATaGACCTGTAGTCCCAGCTAC +
Preference number: 4 (lower is better)
Translates to: KWQPCVWEALYQILYIHNYPGMA*TCSPSY
Trigger: GTAGCTGGGACTACAGGTGCATGCCATGCCTGGATA...ATTGTGTATGTAAAGGATTTGGTACAGTGCCTCCCAGACACAGGGTTGCCATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419472.1
CDS-3UTR CCA 90 bp GGTACAAAGGCTTCCAACAAATCTAGCAAATCCAGTGCAGAACTAAGAACACCCAAGCCCACCATTCTCTaGCATGGTGGTGAAGAGGCA +
Preference number: 4 (lower is better)
Translates to: GTKASNKSSKSSAELRTPKPTIL*HGGEEA
Trigger: TGCCTCTTCACCACCATGCCAGAGAATGGTGGGCTT...GGGTGTTCTTAGTTCTGCACTGGATTTGCTAGATTTGTTGGAAGCCTTTGTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR CCA 90 bp AACTTGGCTCCATGTGGAGATGAATTATGGGCAGCCTCTCCACCATTACAGAGAAGCCTGTTTAGGACCTaGACTATACAGCACCATGGT +
Preference number: 4 (lower is better)
Translates to: NLAPCGDELWAASPPLQRSLFRT*TIQHHG
Trigger: ACCATGGTGCTGTATAGTCCAGGTCCTAAACAGGCT...TCTCTGTAATGGTGGAGAGGCTGCCCATAATTCATCTCCACATGGAGCCAAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CCA 90 bp GGTTTCTACAGCAGTGCCTGTGGTGTAGGCCTCAAGAAAGACATTTGCAACAGTTCCATGTTTGCACACTaGTTTCTACAGCAGTGCCTG +
Preference number: 4 (lower is better)
Translates to: GFYSSACGVGLKKDICNSSMFAH*FLQQCL
Trigger: CAGGCACTGCTGTAGAAACCAGTGTGCAAACATGGA...ACTGTTGCAAATGTCTTTCTTGAGGCCTACACCACAGGCACTGCTGTAGAAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493341.1
CDS-3UTR CCA 90 bp CTAAGGTCAGGCTCCACACAATCCAGACTCTTCCAACAATCACTGGATGGCCGGCATATCGATCACTTGTaGATCTGTACCTTTCTGAGT +
Preference number: 4 (lower is better)
Translates to: LRSGSTQSRLFQQSLDGRHIDHL*ICTFLS
Trigger: ACTCAGAAAGGTACAGATCCACAAGTGATCGATATG...CCGGCCATCCAGTGATTGTTGGAAGAGTCTGGATTGTGTGGAGCCTGACCTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS-3UTR CCA 90 bp GCTCTTGTCCCCTCTAGTCCCTTCCCCACACCATGGCTCAATTGTCTTTCTAAATCGGAGCAGGATAGGTaGCCACAAATGCATTATGTA +
Preference number: 4 (lower is better)
Translates to: ALVPSSPFPTPWLNCLSKSEQDR*PQMHYV
Trigger: TACATAATGCATTTGTGGCCACCTATCCTGCTCCGA...TTTAGAAAGACAATTGAGCCATGGTGTGGGGAAGGGACTAGAGGGGACAAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419472.1
CDS-3UTR CCA 90 bp CTAAGGTCAGGCTCCACACAATCCAGACTCTTCCAACAATCACTGGATGGCCGGTGTGTTACTTCACCATaGCTTTTTCTACATCTCCAC +
Preference number: 4 (lower is better)
Translates to: LRSGSTQSRLFQQSLDGRCVTSP*LFLHLH
Trigger: GTGGAGATGTAGAAAAAGCCATGGTGAAGTAACACA...CCGGCCATCCAGTGATTGTTGGAAGAGTCTGGATTGTGTGGAGCCTGACCTTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS-3UTR CCA 90 bp CTAAGGTCAGGCTCCACACAATCCAGACTCTTCCAACAATCACTGGATGGCCGGCATGGTGACCGACTTTaGAGGTTTAACAGGATAAAA +
Preference number: 4 (lower is better)
Translates to: LRSGSTQSRLFQQSLDGRHGDRL*RFNRIK
Trigger: TTTTATCCTGTTAAACCTCCAAAGTCGGTCACCATG...CCGGCCATCCAGTGATTGTTGGAAGAGTCTGGATTGTGTGGAGCCTGACCTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS-3UTR CCA 90 bp GGTACAAAGGCTTCCAACAAATCTAGCAAATCCAGTGCAGAACTAAGAACACCCTATGATGCCTCCAGTTaGCCTTGCTACCGCTCCTAC +
Preference number: 4 (lower is better)
Translates to: GTKASNKSSKSSAELRTPYDASS*PCYRSY
Trigger: GTAGGAGCGGTAGCAAGGCCAACTGGAGGCATCATA...GGGTGTTCTTAGTTCTGCACTGGATTTGCTAGATTTGTTGGAAGCCTTTGTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR CCA 90 bp ATTGCTGTGTGTCTTCAGGCAGTGTTCTCTGTCAGAGGCTCGGAGAAGGTTCTCTACCCTGGCATCCTCTaGGGTCTTGAAGTTAATTAT +
Preference number: 4 (lower is better)
Translates to: IAVCLQAVFSVRGSEKVLYPGIL*GLEVNY
Trigger: ATAATTAACTTCAAGACCCCAGAGGATGCCAGGGTA...GAGAACCTTCTCCGAGCCTCTGACAGAGAACACTGCCTGAAGACACACAGCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467124.1
CDS-3UTR TCA 90 bp GAACTAGAAACATTAAACTTGGCTCCATGTGGAGATGAATTATGGGCAGCCTCTTCTCTGGCATGGTGGTaGAGAGGCACATCAGGTTTG +
Preference number: 4 (lower is better)
Translates to: ELETLNLAPCGDELWAASSLAWW*RGTSGL
Trigger: CAAACCTGATGTGCCTCTTCACCACCATGCCAGAGA...AGAGGCTGCCCATAATTCATCTCCACATGGAGCCAAGTTTAATGTTTCTAGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR TCA 90 bp GCTCTTGTCCCCTCTAGTCCCTTCCCCACACCATGGCTCAATTGTCTTTCTAAAACTTCTAGCTCAAGCTaGCAGTGCAGATTTATTAGG +
Preference number: 4 (lower is better)
Translates to: ALVPSSPFPTPWLNCLSKTSSSS*QCRFIR
Trigger: CCTAATAAATCTGCACTGTCAGCTTGAGCTAGAAGT...TTTAGAAAGACAATTGAGCCATGGTGTGGGGAAGGGACTAGAGGGGACAAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000419472.1
CDS-3UTR TCA 90 bp AAATGGCAACCCTGTGTCTGGGAGGCACTGTACCAAATCCTTTACATACACAATCTTTACGAAGTCAGCTaGAGATCCAGTGGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: KWQPCVWEALYQILYIHNLYEVS*RSSGSF
Trigger: GAAGCTGCCACTGGATCTTCAGCTGACTTCGTAAAG...ATTGTGTATGTAAAGGATTTGGTACAGTGCCTCCCAGACACAGGGTTGCCATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419472.1
CDS-3UTR TCA 90 bp CTAAGGTCAGGCTCCACACAATCCAGACTCTTCCAACAATCACTGGATGGCCGGATCCTAATGGTATGTTaGATTCATTTTCAGGTGAGG +
Preference number: 4 (lower is better)
Translates to: LRSGSTQSRLFQQSLDGRILMVC*IHFQVR
Trigger: CCTCACCTGAAAATGAATTCAACATACCATTAGGAT...CCGGCCATCCAGTGATTGTTGGAAGAGTCTGGATTGTGTGGAGCCTGACCTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS-3UTR TCA 90 bp CCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATTGCTGTGTGACTGCCACTCACACGTaGGTTGTCCAAATGTTCCCT +
Preference number: 4 (lower is better)
Translates to: PKQVLEGSLGAVITYCCVTATHT*VVQMFP
Trigger: AGGGAACATTTGGACAACTCACGTGTGAGTGGCAGT...CACACAGCAATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR TCA 90 bp TGTCAGAGGCTCGGAGAAGGTTCTCTTGCTTCTTGTAGCTTTGTGAGGATCCAACCAAACTCTCTGGCATaGAATACAGACTTCACTCGT +
Preference number: 4 (lower is better)
Translates to: CQRLGEGSLASCSFVRIQPNSLA*NTDFTR
Trigger: ACGAGTGAAGTCTGTATTTCATGCCAGAGAGTTTGG...TTGGATCCTCACAAAGCTACAAGAAGCAAGAGAACCTTCTCCGAGCCTCTGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467124.1
CDS-3UTR TCA 90 bp AGCGAGGGTTTAAGGAGCCTGAGAAGAATTTCACAACTATTGACTATACAGAGTGGCTCCATGTGGAGATaGATTATGGGCAGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: SEGLRSLRRISQLLTIQSGSMWR*IMGSLS
Trigger: GGAGAGGCTGCCCATAATTCATCTCCACATGGAGCC...ACTCTGTATAGTCAATAGTTGTGAAATTCTTCTCAGGCTCCTTAAACCCTCGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR TCA 90 bp CTAAGGTCAGGCTCCACACAATCCAGACTCTTCCAACAATCACTGGATGGCCGGTACATAAACTTTATATaGGAGGGACTGTCTGTTGGA +
Preference number: 4 (lower is better)
Translates to: LRSGSTQSRLFQQSLDGRYINFI*EGLSVG
Trigger: TCCAACAGACAGTCCCTCTCATATAAAGTTTATGTA...CCGGCCATCCAGTGATTGTTGGAAGAGTCTGGATTGTGTGGAGCCTGACCTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS-3UTR GCA 90 bp CCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATTGCTGTGTGAGCTGCCTGAACAGTTaGCTCAGCCAAGGCTTGTTT +
Preference number: 4 (lower is better)
Translates to: PKQVLEGSLGAVITYCCVSCLNS*LSQGLF
Trigger: AAACAAGCCTTGGCTGAGGCAACTGTTCAGGCAGCT...CACACAGCAATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR GCA 90 bp GAACTAGAAACATTAAACTTGGCTCCATGTGGAGATGAATTATGGGCAGCCTCTTCAGAAACTGGAGACTaGGGGATGACCACAACTGGG +
Preference number: 4 (lower is better)
Translates to: ELETLNLAPCGDELWAASSETGD*GMTTTG
Trigger: CCCAGTTGTGGTCATCCCGCAGTCTCCAGTTTCTGA...AGAGGCTGCCCATAATTCATCTCCACATGGAGCCAAGTTTAATGTTTCTAGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR GCA 90 bp GGTACAAAGGCTTCCAACAAATCTAGCAAATCCAGTGCAGAACTAAGAACACCCATCCATGGTCATAGCTaGTACCCCCTTAGCCATAGC +
Preference number: 4 (lower is better)
Translates to: GTKASNKSSKSSAELRTPIHGHS*YPLSHS
Trigger: GCTATGGCTAAGGGGGTAGCAGCTATGACCATGGAT...GGGTGTTCTTAGTTCTGCACTGGATTTGCTAGATTTGTTGGAAGCCTTTGTACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR CCA 90 bp GACACTACACCCAGGGAGGCAGGGGACTGTAATTTTTCTGAGAATGGTGAAATCCGGGATGACCACAACTaGGGCTTTGATGTTAATATC +
Preference number: 4 (lower is better)
Translates to: DTTPREAGDCNFSENGEIRDDHN*GFDVNI
Trigger: GATATTAACATCAAAGCCCCAGTTGTGGTCATCCCG...GATTTCACCATTCTCAGAAAAATTACAGTCCCCTGCCTCCCTGGGTGTAGTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS-3UTR CCA 90 bp CCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATTGCTGTGTGCAAATCAATAACAGGTaGGGGAGAGCTCTGGCTCTC +
Preference number: 4 (lower is better)
Translates to: PKQVLEGSLGAVITYCCVQINNR*GRALAL
Trigger: GAGAGCCAGAGCTCTCCCCCACCTGTTATTGATTTG...CACACAGCAATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CCA 90 bp CAGAGAAGGATCACGAACATCTGTAAAGGAAGCCTGTTTAGGACCTGGACTATACAAATCAATAACAGGTaGGGGAGAGCTCTGGCTCTC +
Preference number: 4 (lower is better)
Translates to: QRRITNICKGSLFRTWTIQINNR*GRALAL
Trigger: GAGAGCCAGAGCTCTCCCCCACCTGTTATTGATTTG...TATAGTCCAGGTCCTAAACAGGCTTCCTTTACAGATGTTCGTGATCCTTCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493341.1
CDS-3UTR CCA 90 bp GCAGGAAGAGGGTCATGGCCATTTAAGCATTTTCAAAGGCAAAGCACAAGAATCCAAATCAATAACAGGTaGGGGAGAGCTCTGGCTCTC +
Preference number: 4 (lower is better)
Translates to: AGRGSWPFKHFQRQSTRIQINNR*GRALAL
Trigger: GAGAGCCAGAGCTCTCCCCCACCTGTTATTGATTTG...GATTCTTGTGCTTTGCCTTTGAAAATGCTTAAATGGCCATGACCCTCTTCCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR CCA 90 bp GCAGGAAGAGGGTCATGGCCATTTAAGCATTTTCAAAGGCAAAGCACAAGAATCCTACAGCAGTGCCTGTaGTGTAGGCCTCAAGAAAGA +
Preference number: 4 (lower is better)
Translates to: AGRGSWPFKHFQRQSTRILQQCL*CRPQER
Trigger: TCTTTCTTGAGGCCTACACCACAGGCACTGCTGTAG...GATTCTTGTGCTTTGCCTTTGAAAATGCTTAAATGGCCATGACCCTCTTCCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR CCA 90 bp GCAGGAAGAGGGTCATGGCCATTTAAGCATTTTCAAAGGCAAAGCACAAGAATCGGGCAGGCTCTCACTTaGAGATCTTTAATGGCAGCA +
Preference number: 4 (lower is better)
Translates to: AGRGSWPFKHFQRQSTRIGQALT*RSLMAA
Trigger: TGCTGCCATTAAAGATCTCCAAGTGAGAGCCTGCCC...GATTCTTGTGCTTTGCCTTTGAAAATGCTTAAATGGCCATGACCCTCTTCCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR CCA 90 bp GTAAGGCACGTGAATGTACTTCTACCACAGCAGCTGTCACCACAGTTGCTCCTCGATACCAAGATTCCATaGTCTAAAATCCTCAGTCTG +
Preference number: 4 (lower is better)
Translates to: VRHVNVLLPQQLSPQLLLDTKIP*SKILSL
Trigger: CAGACTGAGGATTTTAGACCATGGAATCTTGGTATC...GAGGAGCAACTGTGGTGACAGCTGCTGTGGTAGAAGTACATTCACGTGCCTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493341.1
CDS-3UTR CCA 90 bp AACTTGGCTCCATGTGGAGATGAATTATGGGCAGCCTCTCCACCATTACAGAGATCGGAGCAGGATAGGTaGCCACAAATGCATTATGTA +
Preference number: 4 (lower is better)
Translates to: NLAPCGDELWAASPPLQRSEQDR*PQMHYV
Trigger: TACATAATGCATTTGTGGCCACCTATCCTGCTCCGA...TCTCTGTAATGGTGGAGAGGCTGCCCATAATTCATCTCCACATGGAGCCAAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CCA 90 bp GACACTACACCCAGGGAGGCAGGGGACTGTAATTTTTCTGAGAATGGTGAAATCGTACATCTGTCAGTGTaGCACCAATACTCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: DTTPREAGDCNFSENGEIVHLSV*HQYSSA
Trigger: TGCTGAAGAGTATTGGTGCCACACTGACAGATGTAC...GATTTCACCATTCTCAGAAAAATTACAGTCCCCTGCCTCCCTGGGTGTAGTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS-3UTR CCA 90 bp GAACTAGAAACATTAAACTTGGCTCCATGTGGAGATGAATTATGGGCAGCCTCTTATGATGCCTCCAGTTaGCCTTGCTACCGCTCCTAC +
Preference number: 4 (lower is better)
Translates to: ELETLNLAPCGDELWAASYDASS*PCYRSY
Trigger: GTAGGAGCGGTAGCAAGGCCAACTGGAGGCATCATA...AGAGGCTGCCCATAATTCATCTCCACATGGAGCCAAGTTTAATGTTTCTAGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CCA 90 bp CAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATTGCTGTGTGTCTTCATATGATGCCTCCAGTTaGCCTTGCTACCGCTCCTAC +
Preference number: 4 (lower is better)
Translates to: QVLEGSLGAVITYCCVSSYDASS*PCYRSY
Trigger: GTAGGAGCGGTAGCAAGGCCAACTGGAGGCATCATA...TGAAGACACACAGCAATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
3UTR CAA 72 bp CAGCAGTGCCTGTGGTGTAGGCCTCAAGAAAGACATTaGCAACAGTCTGCAGAAATTCTACGCTTGCACAAA +
Preference number: 4 (lower is better)
Translates to: QQCLWCRPQERH*QQSAEILRLHK
Trigger: TTTGTGCAAGCGTAGAATTTCTGCAGACTGTTGCAAATGTCTTTCTTGAGGCCTACACCACAGGCACTGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493341.1
3UTR CAA 72 bp TTCCTGTGTAGGTACTTCTTCCTTAGCAGTCCATGTTaGCACACTGGTTTCTACAGCAGTGCCTGTGGTGTA +
Preference number: 4 (lower is better)
Translates to: FLCRYFFLSSPC*HTGFYSSACGV
Trigger: TACACCACAGGCACTGCTGTAGAAACCAGTGTGCAAACATGGACTGCTAAGGAAGAAGTACCTACACAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493341.1
CDS-3UTR TCA 90 bp CCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATTGCTGTGTGCATGGAACCCAGTATTaGTCAGTTGTCTGCATGCTC +
Preference number: 4 (lower is better)
Translates to: PKQVLEGSLGAVITYCCVHGTQY*SVVCML
Trigger: GAGCATGCAGACAACTGATCAATACTGGGTTCCATG...CACACAGCAATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR TCA 90 bp GGTACAAAGGCTTCCAACAAATCTAGCAAATCCAGTGCAGAACTAAGAACACCCCATGGAACCCAGTATTaGTCAGTTGTCTGCATGCTC +
Preference number: 4 (lower is better)
Translates to: GTKASNKSSKSSAELRTPHGTQY*SVVCML
Trigger: GAGCATGCAGACAACTGATCAATACTGGGTTCCATG...GGGTGTTCTTAGTTCTGCACTGGATTTGCTAGATTTGTTGGAAGCCTTTGTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR TCA 90 bp TGTAATATGCTTCCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTCTCTGGCATGGTGGTaGAGAGGCACATCAGGTTTG +
Preference number: 4 (lower is better)
Translates to: CNMLPKQVLEGSLGAVITSLAWW*RGTSGL
Trigger: CAAACCTGATGTGCCTCTTCACCACCATGCCAGAGA...AGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGGAAGCATATTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR TCA 90 bp GGTACAAAGGCTTCCAACAAATCTAGCAAATCCAGTGCAGAACTAAGAACACCCTCAAAGTTGCTGCAGTaGGCTGTGCTAGATGTACCT +
Preference number: 4 (lower is better)
Translates to: GTKASNKSSKSSAELRTPSKLLQ*AVLDVP
Trigger: AGGTACATCTAGCACAGCTCACTGCAGCAACTTTGA...GGGTGTTCTTAGTTCTGCACTGGATTTGCTAGATTTGTTGGAAGCCTTTGTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR TCA 90 bp CCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATTGCTGTGTGCTCGTCACCTTTAGATaGCCAAGGTCCAAAAGAAGC +
Preference number: 4 (lower is better)
Translates to: PKQVLEGSLGAVITYCCVLVTFR*PRSKRS
Trigger: GCTTCTTTTGGACCTTGGTCATCTAAAGGTGACGAG...CACACAGCAATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR TCA 90 bp GCAGGAAGAGGGTCATGGCCATTTAAGCATTTTCAAAGGCAAAGCACAAGAATCCTCGTCACCTTTAGATaGCCAAGGTCCAAAAGAAGC +
Preference number: 4 (lower is better)
Translates to: AGRGSWPFKHFQRQSTRILVTFR*PRSKRS
Trigger: GCTTCTTTTGGACCTTGGTCATCTAAAGGTGACGAG...GATTCTTGTGCTTTGCCTTTGAAAATGCTTAAATGGCCATGACCCTCTTCCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR TCA 90 bp GCAGGAAGAGGGTCATGGCCATTTAAGCATTTTCAAAGGCAAAGCACAAGAATCACTCCAGTTGGAAACTaGAGAGGTTCTTCCAAGGGA +
Preference number: 4 (lower is better)
Translates to: AGRGSWPFKHFQRQSTRITPVGN*RGSSKG
Trigger: TCCCTTGGAAGAACCTCTTCAGTTTCCAACTGGAGT...GATTCTTGTGCTTTGCCTTTGAAAATGCTTAAATGGCCATGACCCTCTTCCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR TCA 90 bp CCAGAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGTTTGCCATTCCAGCTGCCTaGACAGTTGCCTCAGCCAAG +
Preference number: 4 (lower is better)
Translates to: PEYRVLEIISVICFPNRFAIPAA*TVASAK
Trigger: CTTGGCTGAGGCAACTGTTCAGGCAGCTGGAATGGC...AAACCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR TCA 90 bp GACACTACACCCAGGGAGGCAGGGGACTGTAATTTTTCTGAGAATGGTGAAATCTTTTGTTACAGCAGGTaGGGCACTACCATCTTTTTC +
Preference number: 4 (lower is better)
Translates to: DTTPREAGDCNFSENGEIFCYSR*GTTIFF
Trigger: GAAAAAGATGGTAGTGCCTCACCTGCTGTAACAAAA...GATTTCACCATTCTCAGAAAAATTACAGTCCCCTGCCTCCCTGGGTGTAGTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS-3UTR TCA 90 bp GGTACAAAGGCTTCCAACAAATCTAGCAAATCCAGTGCAGAACTAAGAACACCCTTTTGCCTTTTCTCTTaGCTGGAAGAAACGGGCAGG +
Preference number: 4 (lower is better)
Translates to: GTKASNKSSKSSAELRTPFCLFS*LEETGR
Trigger: CCTGCCCGTTTCTTCCAGTCAAGAGAAAAGGCAAAA...GGGTGTTCTTAGTTCTGCACTGGATTTGCTAGATTTGTTGGAAGCCTTTGTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR TCA 90 bp GTGATTTTGCCTTTTCTCTTGACTGGAAGAAACGGGCAGGCTCTCACTTGGAGATGTCAGGGATTTTACTaGCATATCGATCACTTGTGG +
Preference number: 4 (lower is better)
Translates to: VILPFLLTGRNGQALTWRCQGFY*HIDHLW
Trigger: CCACAAGTGATCGATATGTCAGTAAAATCCCTGACA...TCTCCAAGTGAGAGCCTGCCCGTTTCTTCCAGTCAAGAGAAAAGGCAAAATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000493341.1
CDS-3UTR TCA 90 bp CCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATTGCTGTGTGCTGGGGAGCGAATTGTaGCCTTCTTACTTCCTTCTA +
Preference number: 4 (lower is better)
Translates to: PKQVLEGSLGAVITYCCVLGSEL*PSYFLL
Trigger: TAGAAGGAAGTAAGAAGGTCACAATTCGCTCCCCAG...CACACAGCAATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR TCA 90 bp TTCCTCCAAAAGAGACATGTATCAGAAAAGTGTAAACGGCTGGGTGTACTGGCTCTGGGGAGCGAATTGTaGCCTTCTTACTTCCTTCTA +
Preference number: 4 (lower is better)
Translates to: FLQKRHVSEKCKRLGVLALGSEL*PSYFLL
Trigger: TAGAAGGAAGTAAGAAGGTCACAATTCGCTCCCCAG...AGCCAGTACACCCAGCCGTTTACACTTTTCTGATACATGTCTCTTTTGGAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000419472.1
CDS-3UTR TCA 90 bp GGTACAAAGGCTTCCAACAAATCTAGCAAATCCAGTGCAGAACTAAGAACACCCCTGGGGAGCGAATTGTaGCCTTCTTACTTCCTTCTA +
Preference number: 4 (lower is better)
Translates to: GTKASNKSSKSSAELRTPLGSEL*PSYFLL
Trigger: TAGAAGGAAGTAAGAAGGTCACAATTCGCTCCCCAG...GGGTGTTCTTAGTTCTGCACTGGATTTGCTAGATTTGTTGGAAGCCTTTGTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR TCA 90 bp GCTCTTGTCCCCTCTAGTCCCTTCCCCACACCATGGCTCAATTGTCTTTCTAAACTGGCTTCAGAAAAATaGATGATCGGTAAGATCCTA +
Preference number: 4 (lower is better)
Translates to: ALVPSSPFPTPWLNCLSKLASEK*MIGKIL
Trigger: TAGGATCTTACCGATCATTCATTTTTCTGAAGCCAG...TTTAGAAAGACAATTGAGCCATGGTGTGGGGAAGGGACTAGAGGGGACAAGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000419472.1
CDS-3UTR TCA 90 bp GGTACAAAGGCTTCCAACAAATCTAGCAAATCCAGTGCAGAACTAAGAACACCCGGTGGATGCTTTCGATaGATTCCGTCTGCTTTGTAC +
Preference number: 4 (lower is better)
Translates to: GTKASNKSSKSSAELRTPGGCFR*IPSALY
Trigger: GTACAAAGCAGACGGAATTCATCGAAAGCATCCACC...GGGTGTTCTTAGTTCTGCACTGGATTTGCTAGATTTGTTGGAAGCCTTTGTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR TCA 90 bp GAACTAGAAACATTAAACTTGGCTCCATGTGGAGATGAATTATGGGCAGCCTCTCTTCTTGTAGCTTTGTaGGGATCCACCTGGCATCCT +
Preference number: 4 (lower is better)
Translates to: ELETLNLAPCGDELWAASLLVAL*GSTWHP
Trigger: AGGATGCCAGGTGGATCCTCACAAAGCTACAAGAAG...AGAGGCTGCCCATAATTCATCTCCACATGGAGCCAAGTTTAATGTTTCTAGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR TCA 90 bp GAACTAGAAACATTAAACTTGGCTCCATGTGGAGATGAATTATGGGCAGCCTCTCTAGAGACAAGGAAGTaGTGGGAGGAGGTGATGAGT +
Preference number: 4 (lower is better)
Translates to: ELETLNLAPCGDELWAASLETRK*WEEVMS
Trigger: ACTCATCACCTCCTCCCATCACTTCCTTGTCTCTAG...AGAGGCTGCCCATAATTCATCTCCACATGGAGCCAAGTTTAATGTTTCTAGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS-3UTR TCA 90 bp ATGGTGAATCAGCCAAAAGGTAGATGGTGCAGATTCAACGGACTCAAAAGGACAGAAAAACAGCATCCCTaGGGATTTGGGTTGATCCTG +
Preference number: 4 (lower is better)
Translates to: MVNQPKGRWCRFNGLKRTEKQHP*GFGLIL
Trigger: CAGGATCAACCCAAATCCTCAGGGATGCTGTTTTTC...TGTCCTTTTGAGTCCGTTGAATCTGCACCATCTACCTTTTGGCTGATTCACCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS-3UTR GCA 90 bp AACTTGGCTCCATGTGGAGATGAATTATGGGCAGCCTCTCCACCATTACAGAGATTTAAAGAAACCAGCTaGTCCTCCTTTTTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: NLAPCGDELWAASPPLQRFKETS*SSFLSS
Trigger: GGAGCTCAAAAAGGAGGAGCAGCTGGTTTCTTTAAA...TCTCTGTAATGGTGGAGAGGCTGCCCATAATTCATCTCCACATGGAGCCAAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR GCA 90 bp AAGCGTGACTCTCATTTGAATAACTGTAGAGTAAGCAAACCAGAAATTCTCAATCCCACTCCTGCTGGCTaGCAGAGGGCACCAGAAGAA +
Preference number: 4 (lower is better)
Translates to: KRDSHLNNCRVSKPEILNPTPAG*QRAPEE
Trigger: TTCTTCTGGTGCCCTCTGGCAGCCAGCAGGAGTGGG...ATTGAGAATTTCTGGTTTGCTTACTCTACAGTTATTCAAATGAGAGTCACGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS-3UTR GCA 90 bp AACTTGGCTCCATGTGGAGATGAATTATGGGCAGCCTCTCCACCATTACAGAGAAAAGGTAACAAGCAATaGCCTGGAAGCCGAAAAGAT +
Preference number: 4 (lower is better)
Translates to: NLAPCGDELWAASPPLQRKGNKQ*PGSRKD
Trigger: ATCTTTTCGGCTTCCAGGGCATTGCTTGTTACCTTT...TCTCTGTAATGGTGGAGAGGCTGCCCATAATTCATCTCCACATGGAGCCAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS-3UTR CCA 90 bp GAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGTTTTGGATGCCCAGAGAGAGCTaGGACGTGTCCAAGTCCACC +
Preference number: 4 (lower is better)
Translates to: EYRVLEIISVICFPNRFWMPRES*DVSKST
Trigger: GGTGGACTTGGACACGTCCCAGCTCTCTCTGGGCAT...CCAAAACCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CCA 90 bp CTAAGGTCAGGCTCCACACAATCCAGACTCTTCCAACAATCACTGGATGGCCGGTTTGAACTTCCTATATaGCAGATTTTGTGCCATCAT +
Preference number: 4 (lower is better)
Translates to: LRSGSTQSRLFQQSLDGRFELPI*QILCHH
Trigger: ATGATGGCACAAAATCTGCCATATAGGAAGTTCAAA...CCGGCCATCCAGTGATTGTTGGAAGAGTCTGGATTGTGTGGAGCCTGACCTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS-3UTR CCA 90 bp TGTAATATGCTTCCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTAAGCCCACCATTCTCTaGCATGGTGGTGAAGAGGCA +
Preference number: 4 (lower is better)
Translates to: CNMLPKQVLEGSLGAVITKPTIL*HGGEEA
Trigger: TGCCTCTTCACCACCATGCCAGAGAATGGTGGGCTT...AGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGGAAGCATATTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CCA 90 bp CAGAGAAGGATCACGAACATCTGTAAAGGAAGCCTGTTTAGGACCTGGACTATAAGCCTGTTTAGGACCTaGACTATACAGCACCATGGT +
Preference number: 4 (lower is better)
Translates to: QRRITNICKGSLFRTWTISLFRT*TIQHHG
Trigger: ACCATGGTGCTGTATAGTCCAGGTCCTAAACAGGCT...TATAGTCCAGGTCCTAAACAGGCTTCCTTTACAGATGTTCGTGATCCTTCTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493341.1
CDS-3UTR CCA 90 bp GCAGGAAGAGGGTCATGGCCATTTAAGCATTTTCAAAGGCAAAGCACAAGAATCAGCCTGTTTAGGACCTaGACTATACAGCACCATGGT +
Preference number: 4 (lower is better)
Translates to: AGRGSWPFKHFQRQSTRISLFRT*TIQHHG
Trigger: ACCATGGTGCTGTATAGTCCAGGTCCTAAACAGGCT...GATTCTTGTGCTTTGCCTTTGAAAATGCTTAAATGGCCATGACCCTCTTCCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR CCA 90 bp GCAGGAAGAGGGTCATGGCCATTTAAGCATTTTCAAAGGCAAAGCACAAGAATCTCCATGTTTGCACACTaGTTTCTACAGCAGTGCCTG +
Preference number: 4 (lower is better)
Translates to: AGRGSWPFKHFQRQSTRISMFAH*FLQQCL
Trigger: CAGGCACTGCTGTAGAAACCAGTGTGCAAACATGGA...GATTCTTGTGCTTTGCCTTTGAAAATGCTTAAATGGCCATGACCCTCTTCCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR CCA 90 bp AACTTGGCTCCATGTGGAGATGAATTATGGGCAGCCTCTCCACCATTACAGAGAATTTCTTATCTGCACTaGGGAGCGAATTGTGACCTT +
Preference number: 4 (lower is better)
Translates to: NLAPCGDELWAASPPLQRISYLH*GANCDL
Trigger: AAGGTCACAATTCGCTCCCCAGTGCAGATAAGAAAT...TCTCTGTAATGGTGGAGAGGCTGCCCATAATTCATCTCCACATGGAGCCAAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CCA 90 bp CTCCAAAAGAGACATGTATCAGAAAAGTGTAAACGGCTGGGTGTACTGGCTCATAAAAGTGTAAACGGCTaGGTGTACTGGCTCATGCCT +
Preference number: 4 (lower is better)
Translates to: LQKRHVSEKCKRLGVLAHKSVNG*VYWLMP
Trigger: AGGCATGAGCCAGTACACCCAGCCGTTTACACTTTT...ATGAGCCAGTACACCCAGCCGTTTACACTTTTCTGATACATGTCTCTTTTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000419472.1
CDS-3UTR CCA 90 bp GTGATTTTGCCTTTTCTCTTGACTGGAAGAAACGGGCAGGCTCTCACTTGGAGACCAGGACATTCTGTATaGATTCTACCTCCATTGGTT +
Preference number: 4 (lower is better)
Translates to: VILPFLLTGRNGQALTWRPGHSV*ILPPLV
Trigger: AACCAATGGAGGTAGAATCCATACAGAATGTCCTGG...TCTCCAAGTGAGAGCCTGCCCGTTTCTTCCAGTCAAGAGAAAAGGCAAAATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493341.1
CDS-3UTR TCA 90 bp ATGGTGAATCAGCCAAAAGGTAGATGGTGCAGATTCAACGGACTCAAAAGGACAGAGGCACATCAGGTTTaGACTTCCTATATGGCAGAT +
Preference number: 4 (lower is better)
Translates to: MVNQPKGRWCRFNGLKRTEAHQV*TSYMAD
Trigger: ATCTGCCATATAGGAAGTTCAAACCTGATGTGCCTC...TGTCCTTTTGAGTCCGTTGAATCTGCACCATCTACCTTTTGGCTGATTCACCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS-3UTR TCA 90 bp CCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATTGCTGTGTGGAGGCACATCAGGTTTaGACTTCCTATATGGCAGAT +
Preference number: 4 (lower is better)
Translates to: PKQVLEGSLGAVITYCCVEAHQV*TSYMAD
Trigger: ATCTGCCATATAGGAAGTTCAAACCTGATGTGCCTC...CACACAGCAATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR TCA 90 bp TGTAATATGCTTCCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTCATTGCATCATCCAATaGAGACAGGAGGCGGGGTTT +
Preference number: 4 (lower is better)
Translates to: CNMLPKQVLEGSLGAVITHCIIQ*RQEAGF
Trigger: AAACCCCGCCTCCTGTCTTCATTGGATGATGCAATG...AGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGGAAGCATATTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR TCA 90 bp GAAAGACATTTGCAACAGTCTGCAGAAATTCTACGCTTGCACAAATATACATTTGCCATTCCAGCTGCCTaGACAGTTGCCTCAGCCAAG +
Preference number: 4 (lower is better)
Translates to: ERHLQQSAEILRLHKYTFAIPAA*TVASAK
Trigger: CTTGGCTGAGGCAACTGTTCAGGCAGCTGGAATGGC...AAATGTATATTTGTGCAAGCGTAGAATTTCTGCAGACTGTTGCAAATGTCTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493341.1
CDS-3UTR TCA 90 bp TTGTCTAAGCAGATTCTAACTTCAAACTGTCTATTGTTCCAGATGCTACTTTGTGCCATTCCAGCTGCCTaGACAGTTGCCTCAGCCAAG +
Preference number: 4 (lower is better)
Translates to: LSKQILTSNCLLFQMLLCAIPAA*TVASAK
Trigger: CTTGGCTGAGGCAACTGTTCAGGCAGCTGGAATGGC...ACAAAGTAGCATCTGGAACAATAGACAGTTTGAAGTTAGAATCTGCTTAGACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR TCA 90 bp AACTTGGCTCCATGTGGAGATGAATTATGGGCAGCCTCTCCACCATTACAGAGAGAGGAGTTGCTTTCTTaGCATGAGGTCTTTTATCAT +
Preference number: 4 (lower is better)
Translates to: NLAPCGDELWAASPPLQREELLS*HEVFYH
Trigger: ATGATAAAAGACCTCATGTCAAGAAAGCAACTCCTC...TCTCTGTAATGGTGGAGAGGCTGCCCATAATTCATCTCCACATGGAGCCAAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR TCA 90 bp GCTCTTGTCCCCTCTAGTCCCTTCCCCACACCATGGCTCAATTGTCTTTCTAAACTAAAATCCTCAGTCTaGTCAATTTCTAAGGGTTCA +
Preference number: 4 (lower is better)
Translates to: ALVPSSPFPTPWLNCLSKLKSSV*SISKGS
Trigger: TGAACCCTTAGAAATTGATCAGACTGAGGATTTTAG...TTTAGAAAGACAATTGAGCCATGGTGTGGGGAAGGGACTAGAGGGGACAAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000419472.1
CDS-3UTR TCA 90 bp TTCCTCCAAAAGAGACATGTATCAGAAAAGTGTAAACGGCTGGGTGTACTGGCTGGCTGGTCATTGCATTaGAATGATCATTGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: FLQKRHVSEKCKRLGVLAGWSLH*NDHCPW
Trigger: CCAAGGACAATGATCATTTCAATGCAATGACCAGCC...AGCCAGTACACCCAGCCGTTTACACTTTTCTGATACATGTCTCTTTTGGAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419472.1
CDS-3UTR TCA 90 bp GGTACAAAGGCTTCCAACAAATCTAGCAAATCCAGTGCAGAACTAAGAACACCCGGCTGGTCATTGCATTaGAATGATCATTGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: GTKASNKSSKSSAELRTPGWSLH*NDHCPW
Trigger: CCAAGGACAATGATCATTTCAATGCAATGACCAGCC...GGGTGTTCTTAGTTCTGCACTGGATTTGCTAGATTTGTTGGAAGCCTTTGTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR TCA 90 bp GAACTAGAAACATTAAACTTGGCTCCATGTGGAGATGAATTATGGGCAGCCTCTCTGGGGAGCGAATTGTaGCCTTCTTACTTCCTTCTA +
Preference number: 4 (lower is better)
Translates to: ELETLNLAPCGDELWAASLGSEL*PSYFLL
Trigger: TAGAAGGAAGTAAGAAGGTCACAATTCGCTCCCCAG...AGAGGCTGCCCATAATTCATCTCCACATGGAGCCAAGTTTAATGTTTCTAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR TCA 90 bp GCTCTTGTCCCCTCTAGTCCCTTCCCCACACCATGGCTCAATTGTCTTTCTAAAATCCTAATGGTATGTTaGATTCATTTTCAGGTGAGG +
Preference number: 4 (lower is better)
Translates to: ALVPSSPFPTPWLNCLSKILMVC*IHFQVR
Trigger: CCTCACCTGAAAATGAATTCAACATACCATTAGGAT...TTTAGAAAGACAATTGAGCCATGGTGTGGGGAAGGGACTAGAGGGGACAAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000419472.1
CDS-3UTR TCA 90 bp GGTACAAAGGCTTCCAACAAATCTAGCAAATCCAGTGCAGAACTAAGAACACCCGCTGCTCCTCCTTTTTaGGCTCCTTTGATTGGTTTT +
Preference number: 4 (lower is better)
Translates to: GTKASNKSSKSSAELRTPAAPPF*APLIGF
Trigger: AAAACCAATCAAAGGAGCTCAAAAAGGAGGAGCAGC...GGGTGTTCTTAGTTCTGCACTGGATTTGCTAGATTTGTTGGAAGCCTTTGTACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR TCA 90 bp AGCGAGGGTTTAAGGAGCCTGAGAAGAATTTCACAACTATTGACTATACAGAGTACTGCCACTCACACGTaGGTTGTCCAAATGTTCCCT +
Preference number: 4 (lower is better)
Translates to: SEGLRSLRRISQLLTIQSTATHT*VVQMFP
Trigger: AGGGAACATTTGGACAACTCACGTGTGAGTGGCAGT...ACTCTGTATAGTCAATAGTTGTGAAATTCTTCTCAGGCTCCTTAAACCCTCGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR TCA 90 bp CCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATTGCTGTGTGCCAAACTCTCTGGCATaGAATACAGACTTCACTCGT +
Preference number: 4 (lower is better)
Translates to: PKQVLEGSLGAVITYCCVPNSLA*NTDFTR
Trigger: ACGAGTGAAGTCTGTATTTCATGCCAGAGAGTTTGG...CACACAGCAATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360280.8
ENST00000376636.7
ENST00000467124.1
CDS-3UTR TCA 90 bp AACTTGGCTCCATGTGGAGATGAATTATGGGCAGCCTCTCCACCATTACAGAGAATCACTCAGGGAGTTTaGAATAAGCATGACAGAAGT +
Preference number: 4 (lower is better)
Translates to: NLAPCGDELWAASPPLQRITQGV*NKHDRS
Trigger: ACTTCTGTCATGCTTATTTCAAACTCCCTGAGTGAT...TCTCTGTAATGGTGGAGAGGCTGCCCATAATTCATCTCCACATGGAGCCAAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR TCA 90 bp ATAAGTAATCCCTACTACCTCCACAATCCCTCATCACCCATTTCCAATCACTGTGACTACAGTGAGCTATaGTCGCATCATTGCACTCCA +
Preference number: 4 (lower is better)
Translates to: ISNPYYLHNPSSPISNHCDYSEL*SHHCTP
Trigger: TGGAGTGCAATGATGCGATCATAGCTCACTGTAGTC...ACAGTGATTGGAAATGGGTGATGAGGGATTGTGGAGGTAGTAGGGATTACTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419472.1
CDS-3UTR TCA 90 bp CTCCAAAAGAGACATGTATCAGAAAAGTGTAAACGGCTGGGTGTACTGGCTCATCTGGCAGACAGAATGTaGTCACTAACAGCATCCAAT +
Preference number: 4 (lower is better)
Translates to: LQKRHVSEKCKRLGVLAHLADRM*SLTASN
Trigger: ATTGGATGCTGTTAGTGATCACATTCTGTCTGCCAG...ATGAGCCAGTACACCCAGCCGTTTACACTTTTCTGATACATGTCTCTTTTGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419472.1
CDS-3UTR GCA 90 bp GAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGTTTTGGAGCAGCCATTCCAGCTaGCTGAACAGTTGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: EYRVLEIISVICFPNRFWSSHSS*LNSCLS
Trigger: GCTGAGGCAACTGTTCAGGCAGCTGGAATGGCTGCT...CCAAAACCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR GCA 90 bp CAGGAAAGACAGGCACTATCCTTTCCATGTGGATTAGTCACAAGACCCACTCCTGATGTTAATATCCAGTaGCATTCTGGAACTCCTTTG +
Preference number: 4 (lower is better)
Translates to: QERQALSFPCGLVTRPTPDVNIQ*HSGTPL
Trigger: CAAAGGAGTTCCAGAATGGCACTGGATATTAACATC...AGGAGTGGGTCTTGTGACTAATCCACATGGAAAGGATAGTGCCTGTCTTTCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS-3UTR GCA 90 bp GCTCTTGTCCCCTCTAGTCCCTTCCCCACACCATGGCTCAATTGTCTTTCTAAAATAGGTGGCCACAAATaGATTATGTATGGTAAATCC +
Preference number: 4 (lower is better)
Translates to: ALVPSSPFPTPWLNCLSKIGGHK*IMYGKS
Trigger: GGATTTACCATACATAATGCATTTGTGGCCACCTAT...TTTAGAAAGACAATTGAGCCATGGTGTGGGGAAGGGACTAGAGGGGACAAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000419472.1
CDS-3UTR GCA 90 bp TGTAATATGCTTCCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTATCCATGGTCATAGCTaGTACCCCCTTAGCCATAGC +
Preference number: 4 (lower is better)
Translates to: CNMLPKQVLEGSLGAVITIHGHS*YPLSHS
Trigger: GCTATGGCTAAGGGGGTAGCAGCTATGACCATGGAT...AGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGGAAGCATATTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR GCA 90 bp AACTTGGCTCCATGTGGAGATGAATTATGGGCAGCCTCTCCACCATTACAGAGACTAAAACCAGCTGGTTaGTTATTCATGGCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: NLAPCGDELWAASPPLQRLKPAG*LFMASL
Trigger: AAGAGAAGCCATGAATAAGCAACCAGCTGGTTTTAG...TCTCTGTAATGGTGGAGAGGCTGCCCATAATTCATCTCCACATGGAGCCAAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR GCA 90 bp AACTTGGCTCCATGTGGAGATGAATTATGGGCAGCCTCTCCACCATTACAGAGACAGAGAGTAATACGATaGTACTATGTGGGATGTTTC +
Preference number: 4 (lower is better)
Translates to: NLAPCGDELWAASPPLQRQRVIR*YYVGCF
Trigger: GAAACATCCCACATAGTAGCATCGTATTACTCTCTG...TCTCTGTAATGGTGGAGAGGCTGCCCATAATTCATCTCCACATGGAGCCAAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS-3UTR CCA 90 bp ATGGTGAATCAGCCAAAAGGTAGATGGTGCAGATTCAACGGACTCAAAAGGACATATCCAGTGCCATTCTaGAACTCCTTTGTGCGAGTT +
Preference number: 4 (lower is better)
Translates to: MVNQPKGRWCRFNGLKRTYPVPF*NSFVRV
Trigger: AACTCGCACAAAGGAGTTCCAGAATGGCACTGGATA...TGTCCTTTTGAGTCCGTTGAATCTGCACCATCTACCTTTTGGCTGATTCACCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS-3UTR CCA 90 bp GCAGGAAGAGGGTCATGGCCATTTAAGCATTTTCAAAGGCAAAGCACAAGAATCTATCCAGTGCCATTCTaGAACTCCTTTGTGCGAGTT +
Preference number: 4 (lower is better)
Translates to: AGRGSWPFKHFQRQSTRIYPVPF*NSFVRV
Trigger: AACTCGCACAAAGGAGTTCCAGAATGGCACTGGATA...GATTCTTGTGCTTTGCCTTTGAAAATGCTTAAATGGCCATGACCCTCTTCCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR CCA 90 bp CAGAGAAGGATCACGAACATCTGTAAAGGAAGCCTGTTTAGGACCTGGACTATACGGGATGACCACAACTaGGGCTTTGATGTTAATATC +
Preference number: 4 (lower is better)
Translates to: QRRITNICKGSLFRTWTIRDDHN*GFDVNI
Trigger: GATATTAACATCAAAGCCCCAGTTGTGGTCATCCCG...TATAGTCCAGGTCCTAAACAGGCTTCCTTTACAGATGTTCGTGATCCTTCTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493341.1
CDS-3UTR CCA 90 bp GCAGGAAGAGGGTCATGGCCATTTAAGCATTTTCAAAGGCAAAGCACAAGAATCCGGGATGACCACAACTaGGGCTTTGATGTTAATATC +
Preference number: 4 (lower is better)
Translates to: AGRGSWPFKHFQRQSTRIRDDHN*GFDVNI
Trigger: GATATTAACATCAAAGCCCCAGTTGTGGTCATCCCG...GATTCTTGTGCTTTGCCTTTGAAAATGCTTAAATGGCCATGACCCTCTTCCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR CCA 90 bp GGTACAAAGGCTTCCAACAAATCTAGCAAATCCAGTGCAGAACTAAGAACACCCTCGGAGCAGGATAGGTaGCCACAAATGCATTATGTA +
Preference number: 4 (lower is better)
Translates to: GTKASNKSSKSSAELRTPSEQDR*PQMHYV
Trigger: TACATAATGCATTTGTGGCCACCTATCCTGCTCCGA...GGGTGTTCTTAGTTCTGCACTGGATTTGCTAGATTTGTTGGAAGCCTTTGTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR CCA 90 bp GCAGGAAGAGGGTCATGGCCATTTAAGCATTTTCAAAGGCAAAGCACAAGAATCGTACATCTGTCAGTGTaGCACCAATACTCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: AGRGSWPFKHFQRQSTRIVHLSV*HQYSSA
Trigger: TGCTGAAGAGTATTGGTGCCACACTGACAGATGTAC...GATTCTTGTGCTTTGCCTTTGAAAATGCTTAAATGGCCATGACCCTCTTCCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR CCA 90 bp CCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATTGCTGTGTGCCACCTGGCATCCTCTaGGGTCTTGAAGTTAATTAT +
Preference number: 4 (lower is better)
Translates to: PKQVLEGSLGAVITYCCVPPGIL*GLEVNY
Trigger: ATAATTAACTTCAAGACCCCAGAGGATGCCAGGTGG...CACACAGCAATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CCA 90 bp AAACTTTATATGAGAGGGACTGTCTGTTGGAAGCATAATACACTATCTAAGATGCCAACAATCACTGGATaGCCGGTGCCTCCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: KLYMRGTVCWKHNTLSKMPTITG*PVPPAA
Trigger: TGCTGCAGGAGGCACCGGCCATCCAGTGATTGTTGG...CATCTTAGATAGTGTATTATGCTTCCAACAGACAGTCCCTCTCATATAAAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS-3UTR CCA 90 bp CTCCAAAAGAGACATGTATCAGAAAAGTGTAAACGGCTGGGTGTACTGGCTCATACACCCTTTGGAAACTaGCAGACAGAATGTGATCAC +
Preference number: 4 (lower is better)
Translates to: LQKRHVSEKCKRLGVLAHTPFGN*QTECDH
Trigger: GTGATCACATTCTGTCTGCCAGTTTCCAAAGGGTGT...ATGAGCCAGTACACCCAGCCGTTTACACTTTTCTGATACATGTCTCTTTTGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419472.1
CDS-3UTR TCA 90 bp GAACTAGAAACATTAAACTTGGCTCCATGTGGAGATGAATTATGGGCAGCCTCTAAGGGAAATACCAAATaGCAGCGGTTTGTCCCGATT +
Preference number: 4 (lower is better)
Translates to: ELETLNLAPCGDELWAASKGNTK*QRFVPI
Trigger: AATCGGGACAAACCGCTGTCATTTGGTATTTCCCTT...AGAGGCTGCCCATAATTCATCTCCACATGGAGCCAAGTTTAATGTTTCTAGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR TCA 90 bp AACTTGGCTCCATGTGGAGATGAATTATGGGCAGCCTCTCCACCATTACAGAGATGCCATCATATCAACTaGTTCAAGAAGCTCCATAAT +
Preference number: 4 (lower is better)
Translates to: NLAPCGDELWAASPPLQRCHHIN*FKKLHN
Trigger: ATTATGGAGCTTCTTGAATCAGTTGATATGATGGCA...TCTCTGTAATGGTGGAGAGGCTGCCCATAATTCATCTCCACATGGAGCCAAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR TCA 90 bp GGTACAAAGGCTTCCAACAAATCTAGCAAATCCAGTGCAGAACTAAGAACACCCTCAAGAGTTTCAGGTTaGACATCTGGTTGCTGTTCA +
Preference number: 4 (lower is better)
Translates to: GTKASNKSSKSSAELRTPSRVSG*TSGCCS
Trigger: TGAACAGCAACCAGATGTTCAACCTGAAACTCTTGA...GGGTGTTCTTAGTTCTGCACTGGATTTGCTAGATTTGTTGGAAGCCTTTGTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR TCA 90 bp TGTAATATGCTTCCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTCAAAGTTGCTGCAGTaGGCTGTGCTAGATGTACCT +
Preference number: 4 (lower is better)
Translates to: CNMLPKQVLEGSLGAVITSKLLQ*AVLDVP
Trigger: AGGTACATCTAGCACAGCTCACTGCAGCAACTTTGA...AGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGGAAGCATATTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR TCA 90 bp TGTAATATGCTTCCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTACTCCAGTTGGAAACTaGAGAGGTTCTTCCAAGGGA +
Preference number: 4 (lower is better)
Translates to: CNMLPKQVLEGSLGAVITTPVGN*RGSSKG
Trigger: TCCCTTGGAAGAACCTCTTCAGTTTCCAACTGGAGT...AGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGGAAGCATATTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR TCA 90 bp GGTACAAAGGCTTCCAACAAATCTAGCAAATCCAGTGCAGAACTAAGAACACCCTTTTGTTACAGCAGGTaGGGCACTACCATCTTTTTC +
Preference number: 4 (lower is better)
Translates to: GTKASNKSSKSSAELRTPFCYSR*GTTIFF
Trigger: GAAAAAGATGGTAGTGCCTCACCTGCTGTAACAAAA...GGGTGTTCTTAGTTCTGCACTGGATTTGCTAGATTTGTTGGAAGCCTTTGTACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR TCA 90 bp GACACTACACCCAGGGAGGCAGGGGACTGTAATTTTTCTGAGAATGGTGAAATCCAAATATACATTTCTTaGAAGACCGCATCAGTCACA +
Preference number: 4 (lower is better)
Translates to: DTTPREAGDCNFSENGEIQIYIS*KTASVT
Trigger: TGTGACTGATGCGGTCTTTCAAGAAATGTATATTTG...GATTTCACCATTCTCAGAAAAATTACAGTCCCCTGCCTCCCTGGGTGTAGTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS-3UTR TCA 90 bp GCAGGAAGAGGGTCATGGCCATTTAAGCATTTTCAAAGGCAAAGCACAAGAATCAATTTCCCACTTCACTaGTTCCTGTGTAGGTACTTC +
Preference number: 4 (lower is better)
Translates to: AGRGSWPFKHFQRQSTRINFPLH*FLCRYF
Trigger: GAAGTACCTACACAGGAATCAGTGAAGTGGGAAATT...GATTCTTGTGCTTTGCCTTTGAAAATGCTTAAATGGCCATGACCCTCTTCCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR TCA 90 bp GGTACAAAGGCTTCCAACAAATCTAGCAAATCCAGTGCAGAACTAAGAACACCCTGTCAGGGATTTTACTaGCATATCGATCACTTGTGG +
Preference number: 4 (lower is better)
Translates to: GTKASNKSSKSSAELRTPCQGFY*HIDHLW
Trigger: CCACAAGTGATCGATATGTCAGTAAAATCCCTGACA...GGGTGTTCTTAGTTCTGCACTGGATTTGCTAGATTTGTTGGAAGCCTTTGTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR TCA 90 bp AAACGGGCAGGCTCTCACTTGGAGATCTTTAATGGCAGCAGTCATTGTACTATTACTTCTAGCTCAAGCTaGCAGTGCAGATTTATTAGG +
Preference number: 4 (lower is better)
Translates to: KRAGSHLEIFNGSSHCTITSSSS*QCRFIR
Trigger: CCTAATAAATCTGCACTGTCAGCTTGAGCTAGAAGT...AATAGTACAATGACTGCTGCCATTAAAGATCTCCAAGTGAGAGCCTGCCCGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493341.1
CDS-3UTR TCA 90 bp GTGATTTTGCCTTTTCTCTTGACTGGAAGAAACGGGCAGGCTCTCACTTGGAGACTAAAATCCTCAGTCTaGTCAATTTCTAAGGGTTCA +
Preference number: 4 (lower is better)
Translates to: VILPFLLTGRNGQALTWRLKSSV*SISKGS
Trigger: TGAACCCTTAGAAATTGATCAGACTGAGGATTTTAG...TCTCCAAGTGAGAGCCTGCCCGTTTCTTCCAGTCAAGAGAAAAGGCAAAATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000493341.1
CDS-3UTR TCA 90 bp CTCCAAAAGAGACATGTATCAGAAAAGTGTAAACGGCTGGGTGTACTGGCTCATAGTGGGACTGAAAAATaGTTTCTTATCTGCACTGGG +
Preference number: 4 (lower is better)
Translates to: LQKRHVSEKCKRLGVLAHSGTEK*FLICTG
Trigger: CCCAGTGCAGATAAGAAATCATTTTTCAGTCCCACT...ATGAGCCAGTACACCCAGCCGTTTACACTTTTCTGATACATGTCTCTTTTGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000419472.1
CDS-3UTR TCA 90 bp CCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATTGCTGTGTGTGCGGCCAGTTTTATTaGCCATCCAATAAGGACTAT +
Preference number: 4 (lower is better)
Translates to: PKQVLEGSLGAVITYCCVCGQFY*PSNKDY
Trigger: ATAGTCCTTATTGGATGGTCAATAAAACTGGCCGCA...CACACAGCAATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR TCA 90 bp GCAGGAAGAGGGTCATGGCCATTTAAGCATTTTCAAAGGCAAAGCACAAGAATCTGCGGCCAGTTTTATTaGCCATCCAATAAGGACTAT +
Preference number: 4 (lower is better)
Translates to: AGRGSWPFKHFQRQSTRICGQFY*PSNKDY
Trigger: ATAGTCCTTATTGGATGGTCAATAAAACTGGCCGCA...GATTCTTGTGCTTTGCCTTTGAAAATGCTTAAATGGCCATGACCCTCTTCCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR TCA 90 bp CAGGAAAGACAGGCACTATCCTTTCCATGTGGATTAGTCACAAGACCCACTCCTACCAACAGTATCAATTaGAAACTGATTGGACAACTC +
Preference number: 4 (lower is better)
Translates to: QERQALSFPCGLVTRPTPTNSIN*KLIGQL
Trigger: GAGTTGTCCAATCAGTTTTCAATTGATACTGTTGGT...AGGAGTGGGTCTTGTGACTAATCCACATGGAAAGGATAGTGCCTGTCTTTCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS-3UTR TCA 90 bp CCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATTGCTGTGTGAGAATTTTCATGTTATaGCCAGTAGGGGTTAGGCGA +
Preference number: 4 (lower is better)
Translates to: PKQVLEGSLGAVITYCCVRIFML*PVGVRR
Trigger: TCGCCTAACCCCTACTGGTCATAACATGAAAATTCT...CACACAGCAATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR TCA 90 bp GCAGGAAGAGGGTCATGGCCATTTAAGCATTTTCAAAGGCAAAGCACAAGAATCAGAATTTTCATGTTATaGCCAGTAGGGGTTAGGCGA +
Preference number: 4 (lower is better)
Translates to: AGRGSWPFKHFQRQSTRIRIFML*PVGVRR
Trigger: TCGCCTAACCCCTACTGGTCATAACATGAAAATTCT...GATTCTTGTGCTTTGCCTTTGAAAATGCTTAAATGGCCATGACCCTCTTCCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR TCA 90 bp CCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATTGCTGTGTGAGGCTGACTTGTGATTaGTCTACTAATGAGGCTGTT +
Preference number: 4 (lower is better)
Translates to: PKQVLEGSLGAVITYCCVRLTCD*STNEAV
Trigger: AACAGCCTCATTAGTAGATCAATCACAAGTCAGCCT...CACACAGCAATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR TCA 90 bp CAGGAAAGACAGGCACTATCCTTTCCATGTGGATTAGTCACAAGACCCACTCCTCTTAATGGCCTGTTTTaGATAGTGTCTTATGACTTC +
Preference number: 4 (lower is better)
Translates to: QERQALSFPCGLVTRPTPLNGLF*IVSYDF
Trigger: GAAGTCATAAGACACTATTCAAAACAGGCCATTAAG...AGGAGTGGGTCTTGTGACTAATCCACATGGAAAGGATAGTGCCTGTCTTTCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS-3UTR TCA 90 bp GAACTAGAAACATTAAACTTGGCTCCATGTGGAGATGAATTATGGGCAGCCTCTGCTGCTCCTCCTTTTTaGGCTCCTTTGATTGGTTTT +
Preference number: 4 (lower is better)
Translates to: ELETLNLAPCGDELWAASAAPPF*APLIGF
Trigger: AAAACCAATCAAAGGAGCTCAAAAAGGAGGAGCAGC...AGAGGCTGCCCATAATTCATCTCCACATGGAGCCAAGTTTAATGTTTCTAGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR TCA 90 bp CCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATTGCTGTGTGGCTCTTTTTATTCCCTaGAATGTACTGCTAGCCATG +
Preference number: 4 (lower is better)
Translates to: PKQVLEGSLGAVITYCCVALFIP*NVLLAM
Trigger: CATGGCTAGCAGTACATTTCAGGGAATAAAAAGAGC...CACACAGCAATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR TCA 90 bp GGTACAAAGGCTTCCAACAAATCTAGCAAATCCAGTGCAGAACTAAGAACACCCGCTCTTTTTATTCCCTaGAATGTACTGCTAGCCATG +
Preference number: 4 (lower is better)
Translates to: GTKASNKSSKSSAELRTPALFIP*NVLLAM
Trigger: CATGGCTAGCAGTACATTTCAGGGAATAAAAAGAGC...GGGTGTTCTTAGTTCTGCACTGGATTTGCTAGATTTGTTGGAAGCCTTTGTACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR TCA 90 bp CAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATTGCTGTGTGTCTTCAGTATTTCGTTTTGGATaGGGACAGTCTGATGCAAGC +
Preference number: 4 (lower is better)
Translates to: QVLEGSLGAVITYCCVSSVFRFG*GQSDAS
Trigger: GCTTGCATCAGACTGTCCTCATCCAAAACGAAATAC...TGAAGACACACAGCAATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS-3UTR TCA 90 bp GACACTACACCCAGGGAGGCAGGGGACTGTAATTTTTCTGAGAATGGTGAAATCTTAGTAAAAAGTCATTaGTATTTGCATAGCACCCCC +
Preference number: 4 (lower is better)
Translates to: DTTPREAGDCNFSENGEILVKSH*YLHSTP
Trigger: GGGGGTGCTATGCAAATATCAATGACTTTTTACTAA...GATTTCACCATTCTCAGAAAAATTACAGTCCCCTGCCTCCCTGGGTGTAGTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS-3UTR GCA 90 bp ATGGTGAATCAGCCAAAAGGTAGATGGTGCAGATTCAACGGACTCAAAAGGACACAGTTCCTGTTGCTTTaGTTCCATGAGTTGTTTCTC +
Preference number: 4 (lower is better)
Translates to: MVNQPKGRWCRFNGLKRTQFLLL*FHELFL
Trigger: GAGAAACAACTCATGGAAGCAAAGCAACAGGAACTG...TGTCCTTTTGAGTCCGTTGAATCTGCACCATCTACCTTTTGGCTGATTCACCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS-3UTR GCA 90 bp GGTACAAAGGCTTCCAACAAATCTAGCAAATCCAGTGCAGAACTAAGAACACCCCTTTACCTCAACTTCTaGCGTCTGTCTAGCTATAGT +
Preference number: 4 (lower is better)
Translates to: GTKASNKSSKSSAELRTPLYLNF*RLSSYS
Trigger: ACTATAGCTAGACAGACGGCAGAAGTTGAGGTAAAG...GGGTGTTCTTAGTTCTGCACTGGATTTGCTAGATTTGTTGGAAGCCTTTGTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR GCA 90 bp GCAGGAAGAGGGTCATGGCCATTTAAGCATTTTCAAAGGCAAAGCACAAGAATCTGCAGAACCAGCAGTTaGATCCATGTAAGAAACCAT +
Preference number: 4 (lower is better)
Translates to: AGRGSWPFKHFQRQSTRICRTSS*IHVRNH
Trigger: ATGGTTTCTTACATGGATGCAACTGCTGGTTCTGCA...GATTCTTGTGCTTTGCCTTTGAAAATGCTTAAATGGCCATGACCCTCTTCCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR GCA 90 bp CATCCAGAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGAGCTGCCTGAACAGTTaGCTCAGCCAAGGCTTGTTT +
Preference number: 4 (lower is better)
Translates to: HPEYRVLEIISVICFPNRSCLNS*LSQGLF
Trigger: AAACAAGCCTTGGCTGAGGCAACTGTTCAGGCAGCT...CCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTCTGGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR GCA 90 bp GATTTTAGGGTACATAAACTTTATATGAGAGGGACTGTCTGTTGGAAGCATAATAGCAGCCATTCCAGCTaGCTGAACAGTTGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: DFRVHKLYMRGTVCWKHNSSHSS*LNSCLS
Trigger: GCTGAGGCAACTGTTCAGGCAGCTGGAATGGCTGCT...ATTATGCTTCCAACAGACAGTCCCTCTCATATAAAGTTTATGTACCCTAAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR GCA 90 bp ACTTGGAGATCTTTAATGGCAGCAGTCATTGTACTATTTTCAAGGTTACCTTTAAGCAGCCATTCCAGCTaGCTGAACAGTTGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: TWRSLMAAVIVLFSRLPLSSHSS*LNSCLS
Trigger: GCTGAGGCAACTGTTCAGGCAGCTGGAATGGCTGCT...TAAAGGTAACCTTGAAAATAGTACAATGACTGCTGCCATTAAAGATCTCCAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493341.1
CDS-3UTR GCA 90 bp GGTACAAAGGCTTCCAACAAATCTAGCAAATCCAGTGCAGAACTAAGAACACCCTCTGGAACTCCTTTGTaGGAGTTCTTTTACACCAGT +
Preference number: 4 (lower is better)
Translates to: GTKASNKSSKSSAELRTPSGTPL*EFFYTS
Trigger: ACTGGTGTAAAAGAACTCGCACAAAGGAGTTCCAGA...GGGTGTTCTTAGTTCTGCACTGGATTTGCTAGATTTGTTGGAAGCCTTTGTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR GCA 90 bp GCAGGAAGAGGGTCATGGCCATTTAAGCATTTTCAAAGGCAAAGCACAAGAATCCGTAGAGCTATTACATaGGGCTGCAGAATTTTCATG +
Preference number: 4 (lower is better)
Translates to: AGRGSWPFKHFQRQSTRIRRAIT*GCRIFM
Trigger: CATGAAAATTCTGCAGCCGCATGTAATAGCTCTACG...GATTCTTGTGCTTTGCCTTTGAAAATGCTTAAATGGCCATGACCCTCTTCCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR GCA 90 bp CATCCAGAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGATCCATGGTCATAGCTaGTACCCCCTTAGCCATAGC +
Preference number: 4 (lower is better)
Translates to: HPEYRVLEIISVICFPNRIHGHS*YPLSHS
Trigger: GCTATGGCTAAGGGGGTAGCAGCTATGACCATGGAT...CCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTCTGGATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR GCA 90 bp GAACTAGAAACATTAAACTTGGCTCCATGTGGAGATGAATTATGGGCAGCCTCTCTGGAGAACTGTATGTaGCTTTTGGCTCAGAGAGTA +
Preference number: 4 (lower is better)
Translates to: ELETLNLAPCGDELWAASLENCM*LLAQRV
Trigger: TACTCTCTGAGCCAAAAGGCACATACAGTTCTCCAG...AGAGGCTGCCCATAATTCATCTCCACATGGAGCCAAGTTTAATGTTTCTAGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS-3UTR GCA 90 bp CCAGAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGTTTATGGCCGGTGCCTCCTaGAGCAGTCTTTCAAGCTTT +
Preference number: 4 (lower is better)
Translates to: PEYRVLEIISVICFPNRFMAGAS*SSLSSF
Trigger: AAAGCTTGAAAGACTGCTGCAGGAGGCACCGGCCAT...AAACCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTCTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS-3UTR CCA 90 bp GAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGTTTTGGAAGCCCACCATTCTCTaGCATGGTGGTGAAGAGGCA +
Preference number: 4 (lower is better)
Translates to: EYRVLEIISVICFPNRFWKPTIL*HGGEEA
Trigger: TGCCTCTTCACCACCATGCCAGAGAATGGTGGGCTT...CCAAAACCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CCA 90 bp TCCCATAAATGTGCAGTAGAAGAAGCCGTTTCTTCTGGGATGGTTTCCTTAGTTTATCCAGTGCCATTCTaGAACTCCTTTGTGCGAGTT +
Preference number: 4 (lower is better)
Translates to: SHKCAVEEAVSSGMVSLVYPVPF*NSFVRV
Trigger: AACTCGCACAAAGGAGTTCCAGAATGGCACTGGATA...AACTAAGGAAACCATCCCAGAAGAAACGGCTTCTTCTACTGCACATTTATGGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493341.1
CDS-3UTR CCA 90 bp CAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATTGCTGTGTGTCTTCACGGGATGACCACAACTaGGGCTTTGATGTTAATATC +
Preference number: 4 (lower is better)
Translates to: QVLEGSLGAVITYCCVSSRDDHN*GFDVNI
Trigger: GATATTAACATCAAAGCCCCAGTTGTGGTCATCCCG...TGAAGACACACAGCAATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CCA 90 bp GCAGGAAGAGGGTCATGGCCATTTAAGCATTTTCAAAGGCAAAGCACAAGAATCCTAGTGGCACTGTATTaGTCTTTTGTTACAGCAGGT +
Preference number: 4 (lower is better)
Translates to: AGRGSWPFKHFQRQSTRILVALY*SFVTAG
Trigger: ACCTGCTGTAACAAAAGACCAATACAGTGCCACTAG...GATTCTTGTGCTTTGCCTTTGAAAATGCTTAAATGGCCATGACCCTCTTCCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR CCA 90 bp GCAGGAAGAGGGTCATGGCCATTTAAGCATTTTCAAAGGCAAAGCACAAGAATCGTTGCTCCTCCTGAATaGTGTGAAGCATTAGTAGTA +
Preference number: 4 (lower is better)
Translates to: AGRGSWPFKHFQRQSTRIVAPPE*CEALVV
Trigger: TACTACTAATGCTTCACACCATTCAGGAGGAGCAAC...GATTCTTGTGCTTTGCCTTTGAAAATGCTTAAATGGCCATGACCCTCTTCCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR CCA 90 bp AGCGAGGGTTTAAGGAGCCTGAGAAGAATTTCACAACTATTGACTATACAGAGTAGCCTGTTTAGGACCTaGACTATACAGCACCATGGT +
Preference number: 4 (lower is better)
Translates to: SEGLRSLRRISQLLTIQSSLFRT*TIQHHG
Trigger: ACCATGGTGCTGTATAGTCCAGGTCCTAAACAGGCT...ACTCTGTATAGTCAATAGTTGTGAAATTCTTCTCAGGCTCCTTAAACCCTCGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CCA 90 bp AATATGCTTCCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATGCCTTTTCTCTTGACTaGAAGAAACGGGCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: NMLPKQVLEGSLGAVITYAFSLD*KKRAGS
Trigger: AGAGCCTGCCCGTTTCTTCCAGTCAAGAGAAAAGGC...ATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGGAAGCATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CCA 90 bp GAATCAATGTTCATTTTTATCATCTCGCCTTTGGGTACCAATTCAGTTGTGGGAGCCTTTTCTCTTGACTaGAAGAAACGGGCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: ESMFIFIISPLGTNSVVGAFSLD*KKRAGS
Trigger: AGAGCCTGCCCGTTTCTTCCAGTCAAGAGAAAAGGC...TCCCACAACTGAATTGGTACCCAAAGGCGAGATGATAAAAATGAACATTGATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493341.1
CDS-3UTR CCA 90 bp GGTACAAAGGCTTCCAACAAATCTAGCAAATCCAGTGCAGAACTAAGAACACCCAGAAGCCGTTTCTTCTaGGATGGTTTCCTTAGTTGT +
Preference number: 4 (lower is better)
Translates to: GTKASNKSSKSSAELRTPRSRFF*DGFLSC
Trigger: ACAACTAAGGAAACCATCCCAGAAGAAACGGCTTCT...GGGTGTTCTTAGTTCTGCACTGGATTTGCTAGATTTGTTGGAAGCCTTTGTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR CCA 90 bp CCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATTGCTGTGTGTTATCATCTCGCCTTTaGGTACCAATTCAGTTGTGG +
Preference number: 4 (lower is better)
Translates to: PKQVLEGSLGAVITYCCVLSSRL*VPIQLW
Trigger: CCACAACTGAATTGGTACCCAAAGGCGAGATGATAA...CACACAGCAATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CCA 90 bp GCAGGAAGAGGGTCATGGCCATTTAAGCATTTTCAAAGGCAAAGCACAAGAATCTTATCATCTCGCCTTTaGGTACCAATTCAGTTGTGG +
Preference number: 4 (lower is better)
Translates to: AGRGSWPFKHFQRQSTRILSSRL*VPIQLW
Trigger: CCACAACTGAATTGGTACCCAAAGGCGAGATGATAA...GATTCTTGTGCTTTGCCTTTGAAAATGCTTAAATGGCCATGACCCTCTTCCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR CCA 90 bp CCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATTGCTGTGTGATTTCTTATCTGCACTaGGGAGCGAATTGTGACCTT +
Preference number: 4 (lower is better)
Translates to: PKQVLEGSLGAVITYCCVISYLH*GANCDL
Trigger: AAGGTCACAATTCGCTCCCCAGTGCAGATAAGAAAT...CACACAGCAATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CCA 90 bp AAATGGCAACCCTGTGTCTGGGAGGCACTGTACCAAATCCTTTACATACACAATATTTCTTATCTGCACTaGGGAGCGAATTGTGACCTT +
Preference number: 4 (lower is better)
Translates to: KWQPCVWEALYQILYIHNISYLH*GANCDL
Trigger: AAGGTCACAATTCGCTCCCCAGTGCAGATAAGAAAT...ATTGTGTATGTAAAGGATTTGGTACAGTGCCTCCCAGACACAGGGTTGCCATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419472.1
CDS-3UTR CCA 90 bp GCAGGAAGAGGGTCATGGCCATTTAAGCATTTTCAAAGGCAAAGCACAAGAATCATTTCTTATCTGCACTaGGGAGCGAATTGTGACCTT +
Preference number: 4 (lower is better)
Translates to: AGRGSWPFKHFQRQSTRIISYLH*GANCDL
Trigger: AAGGTCACAATTCGCTCCCCAGTGCAGATAAGAAAT...GATTCTTGTGCTTTGCCTTTGAAAATGCTTAAATGGCCATGACCCTCTTCCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR CCA 90 bp GAACTAGAAACATTAAACTTGGCTCCATGTGGAGATGAATTATGGGCAGCCTCTTCGGAGCAGGATAGGTaGCCACAAATGCATTATGTA +
Preference number: 4 (lower is better)
Translates to: ELETLNLAPCGDELWAASSEQDR*PQMHYV
Trigger: TACATAATGCATTTGTGGCCACCTATCCTGCTCCGA...AGAGGCTGCCCATAATTCATCTCCACATGGAGCCAAGTTTAATGTTTCTAGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CCA 90 bp ATGGTGAATCAGCCAAAAGGTAGATGGTGCAGATTCAACGGACTCAAAAGGACATGTGCAGTACAAATCTaGGCTGAATGTCCTTCACTT +
Preference number: 4 (lower is better)
Translates to: MVNQPKGRWCRFNGLKRTCAVQI*AECPSL
Trigger: AAGTGAAGGACATTCAGCCCAGATTTGTACTGCACA...TGTCCTTTTGAGTCCGTTGAATCTGCACCATCTACCTTTTGGCTGATTCACCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS-3UTR CCA 90 bp GGTACAAAGGCTTCCAACAAATCTAGCAAATCCAGTGCAGAACTAAGAACACCCTGTGCAGTACAAATCTaGGCTGAATGTCCTTCACTT +
Preference number: 4 (lower is better)
Translates to: GTKASNKSSKSSAELRTPCAVQI*AECPSL
Trigger: AAGTGAAGGACATTCAGCCCAGATTTGTACTGCACA...GGGTGTTCTTAGTTCTGCACTGGATTTGCTAGATTTGTTGGAAGCCTTTGTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR CCA 90 bp GCAGGAAGAGGGTCATGGCCATTTAAGCATTTTCAAAGGCAAAGCACAAGAATCATCTTGCCTTCTTCTTaGGCTTTGTTTCCCAAACCA +
Preference number: 4 (lower is better)
Translates to: AGRGSWPFKHFQRQSTRIILPSS*ALFPKP
Trigger: TGGTTTGGGAAACAAAGCCCAAGAAGAAGGCAAGAT...GATTCTTGTGCTTTGCCTTTGAAAATGCTTAAATGGCCATGACCCTCTTCCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR CCA 90 bp GAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGTTTTGGCTTCAGGACCCTGGATaGCTCCCTGGTAAGGTTCAT +
Preference number: 4 (lower is better)
Translates to: EYRVLEIISVICFPNRFWLQDPG*LPGKVH
Trigger: ATGAACCTTACCAGGGAGCCATCCAGGGTCCTGAAG...CCAAAACCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CCA 90 bp CCAGAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGTTTCTTCAGGACCCTGGATaGCTCCCTGGTAAGGTTCAT +
Preference number: 4 (lower is better)
Translates to: PEYRVLEIISVICFPNRFLQDPG*LPGKVH
Trigger: ATGAACCTTACCAGGGAGCCATCCAGGGTCCTGAAG...AAACCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTCTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CCA 90 bp AACTTGGCTCCATGTGGAGATGAATTATGGGCAGCCTCTCCACCATTACAGAGACCCATGAACAATGAATaGCTCTTTGGTAAATTCATC +
Preference number: 4 (lower is better)
Translates to: NLAPCGDELWAASPPLQRPMNNE*LFGKFI
Trigger: GATGAATTTACCAAAGAGCCATTCATTGTTCATGGG...TCTCTGTAATGGTGGAGAGGCTGCCCATAATTCATCTCCACATGGAGCCAAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CCA 90 bp GAACTAGAAACATTAAACTTGGCTCCATGTGGAGATGAATTATGGGCAGCCTCTTGTGGAGATGAATTATaGGCAGCCTCTCCACCATTA +
Preference number: 4 (lower is better)
Translates to: ELETLNLAPCGDELWAASCGDEL*AASPPL
Trigger: TAATGGTGGAGAGGCTGCCCATAATTCATCTCCACA...AGAGGCTGCCCATAATTCATCTCCACATGGAGCCAAGTTTAATGTTTCTAGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CCA 90 bp CCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATTGCTGTGTGATTTCACGGTTCTTATaGCAAGGGAACAGGAAAGAC +
Preference number: 4 (lower is better)
Translates to: PKQVLEGSLGAVITYCCVISRFL*QGNRKD
Trigger: GTCTTTCCTGTTCCCTTGCCATAAGAACCGTGAAAT...CACACAGCAATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS-3UTR CCA 90 bp GGACTGTCTGTTGGAAGCATAATACACTATCTAAGATGTTGGGAATTGTGTTTATTTCTGGTGGAGAGTTaGCAGGGAACAGGCACTCTG +
Preference number: 4 (lower is better)
Translates to: GLSVGSIIHYLRCWELCLFLVES*QGTGTL
Trigger: CAGAGTGCCTGTTCCCTGCCAACTCTCCACCAGAAA...TAAACACAATTCCCAACATCTTAGATAGTGTATTATGCTTCCAACAGACAGTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS-3UTR CCA 90 bp CCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATTGCTGTGTGTTAGGACTTACAGTGTaGAAAAACAGCATCCCTGAG +
Preference number: 4 (lower is better)
Translates to: PKQVLEGSLGAVITYCCVLGLTV*KNSIPE
Trigger: CTCAGGGATGCTGTTTTTCCACACTGTAAGTCCTAA...CACACAGCAATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS-3UTR CCA 90 bp AAATGGCAACCCTGTGTCTGGGAGGCACTGTACCAAATCCTTTACATACACAATAGAGTGATAAATAAATaGCAACCCTGTGTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: KWQPCVWEALYQILYIHNRVINK*QPCVWE
Trigger: CTCCCAGACACAGGGTTGCCATTTATTTATCACTCT...ATTGTGTATGTAAAGGATTTGGTACAGTGCCTCCCAGACACAGGGTTGCCATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419472.1
CDS-3UTR CCA 90 bp ATAAGTAATCCCTACTACCTCCACAATCCCTCATCACCCATTTCCAATCACTGTCCCTTCCCCACACCATaGCTCAATTGTCTTTCTAAA +
Preference number: 4 (lower is better)
Translates to: ISNPYYLHNPSSPISNHCPFPTP*LNCLSK
Trigger: TTTAGAAAGACAATTGAGCCATGGTGTGGGGAAGGG...ACAGTGATTGGAAATGGGTGATGAGGGATTGTGGAGGTAGTAGGGATTACTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419472.1
3UTR CAA 72 bp TTTTCTCTTGACTGGAAGAAACGGGCAGGCTCTCACTaGGAGATCTTTAATGGCAGCAGTCATTGTACTATT +
Preference number: 4 (lower is better)
Translates to: FSLDWKKRAGSH*EIFNGSSHCTI
Trigger: AATAGTACAATGACTGCTGCCATTAAAGATCTCCAAGTGAGAGCCTGCCCGTTTCTTCCAGTCAAGAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493341.1
CDS-3UTR TCA 90 bp CCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATTGCTGTGTGAATGGTACATCCAGTTaGCTCAGGGCATTTTCTTTA +
Preference number: 4 (lower is better)
Translates to: PKQVLEGSLGAVITYCCVNGTSS*LRAFSL
Trigger: TAAAGAAAATGCCCTGAGTCAACTGGATGTACCATT...CACACAGCAATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR TCA 90 bp GAACTAGAAACATTAAACTTGGCTCCATGTGGAGATGAATTATGGGCAGCCTCTTCAAGAGTTTCAGGTTaGACATCTGGTTGCTGTTCA +
Preference number: 4 (lower is better)
Translates to: ELETLNLAPCGDELWAASSRVSG*TSGCCS
Trigger: TGAACAGCAACCAGATGTTCAACCTGAAACTCTTGA...AGAGGCTGCCCATAATTCATCTCCACATGGAGCCAAGTTTAATGTTTCTAGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR TCA 90 bp GAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGTTTTGGCATTGCATCATCCAATaGAGACAGGAGGCGGGGTTT +
Preference number: 4 (lower is better)
Translates to: EYRVLEIISVICFPNRFWHCIIQ*RQEAGF
Trigger: AAACCCCGCCTCCTGTCTTCATTGGATGATGCAATG...CCAAAACCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR TCA 90 bp AATATGCTTCCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATTCAAAGTTGCTGCAGTaGGCTGTGCTAGATGTACCT +
Preference number: 4 (lower is better)
Translates to: NMLPKQVLEGSLGAVITYSKLLQ*AVLDVP
Trigger: AGGTACATCTAGCACAGCTCACTGCAGCAACTTTGA...ATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGGAAGCATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR TCA 90 bp TGTAATATGCTTCCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTGAATCTGGAATGATTTaGCAGGGGCAGATACTTCAG +
Preference number: 4 (lower is better)
Translates to: CNMLPKQVLEGSLGAVITESGMI*QGQILQ
Trigger: CTGAAGTATCTGCCCCTGTCAAATCATTCCAGATTC...AGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGGAAGCATATTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR TCA 90 bp GCAGGAAGAGGGTCATGGCCATTTAAGCATTTTCAAAGGCAAAGCACAAGAATCGAGGAGTTGCTTTCTTaGCATGAGGTCTTTTATCAT +
Preference number: 4 (lower is better)
Translates to: AGRGSWPFKHFQRQSTRIEELLS*HEVFYH
Trigger: ATGATAAAAGACCTCATGTCAAGAAAGCAACTCCTC...GATTCTTGTGCTTTGCCTTTGAAAATGCTTAAATGGCCATGACCCTCTTCCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR TCA 90 bp CATCCAGAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGTTTTGCCTTTTCTCTTaGCTGGAAGAAACGGGCAGG +
Preference number: 4 (lower is better)
Translates to: HPEYRVLEIISVICFPNRFCLFS*LEETGR
Trigger: CCTGCCCGTTTCTTCCAGTCAAGAGAAAAGGCAAAA...CCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTCTGGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR TCA 90 bp AGCGAGGGTTTAAGGAGCCTGAGAAGAATTTCACAACTATTGACTATACAGAGTGGCTGGTCATTGCATTaGAATGATCATTGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: SEGLRSLRRISQLLTIQSGWSLH*NDHCPW
Trigger: CCAAGGACAATGATCATTTCAATGCAATGACCAGCC...ACTCTGTATAGTCAATAGTTGTGAAATTCTTCTCAGGCTCCTTAAACCCTCGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR TCA 90 bp ATGCTTCCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATTGCAGTGGGACTGAAAAATaGTTTCTTATCTGCACTGGG +
Preference number: 4 (lower is better)
Translates to: MLPKQVLEGSLGAVITYCSGTEK*FLICTG
Trigger: CCCAGTGCAGATAAGAAATCATTTTTCAGTCCCACT...GCAATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGGAAGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR TCA 90 bp GCAGGAAGAGGGTCATGGCCATTTAAGCATTTTCAAAGGCAAAGCACAAGAATCCTGGCTTCAGAAAAATaGATGATCGGTAAGATCCTA +
Preference number: 4 (lower is better)
Translates to: AGRGSWPFKHFQRQSTRILASEK*MIGKIL
Trigger: TAGGATCTTACCGATCATTCATTTTTCTGAAGCCAG...GATTCTTGTGCTTTGCCTTTGAAAATGCTTAAATGGCCATGACCCTCTTCCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR TCA 90 bp GAACTAGAAACATTAAACTTGGCTCCATGTGGAGATGAATTATGGGCAGCCTCTTGCGGCCAGTTTTATTaGCCATCCAATAAGGACTAT +
Preference number: 4 (lower is better)
Translates to: ELETLNLAPCGDELWAASCGQFY*PSNKDY
Trigger: ATAGTCCTTATTGGATGGTCAATAAAACTGGCCGCA...AGAGGCTGCCCATAATTCATCTCCACATGGAGCCAAGTTTAATGTTTCTAGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR TCA 90 bp CATCCAGAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGGGTGGATGCTTTCGATaGATTCCGTCTGCTTTGTAC +
Preference number: 4 (lower is better)
Translates to: HPEYRVLEIISVICFPNRGGCFR*IPSALY
Trigger: GTACAAAGCAGACGGAATTCATCGAAAGCATCCACC...CCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTCTGGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR TCA 90 bp ATGCTTCCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATTGCAGAATTTTCATGTTATaGCCAGTAGGGGTTAGGCGA +
Preference number: 4 (lower is better)
Translates to: MLPKQVLEGSLGAVITYCRIFML*PVGVRR
Trigger: TCGCCTAACCCCTACTGGTCATAACATGAAAATTCT...GCAATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGGAAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR TCA 90 bp ATGGTGAATCAGCCAAAAGGTAGATGGTGCAGATTCAACGGACTCAAAAGGACAACAGCACCATGTATCTaGTTTTGGATCTGTATTCTG +
Preference number: 4 (lower is better)
Translates to: MVNQPKGRWCRFNGLKRTTAPCI*FWICIL
Trigger: CAGAATACAGATCCAAAATCAGATACATGGTGCTGT...TGTCCTTTTGAGTCCGTTGAATCTGCACCATCTACCTTTTGGCTGATTCACCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS-3UTR TCA 90 bp GGTACAAAGGCTTCCAACAAATCTAGCAAATCCAGTGCAGAACTAAGAACACCCACCCAAGATCTAACCTaGGATCCATTTCTTGAATCA +
Preference number: 4 (lower is better)
Translates to: GTKASNKSSKSSAELRTPTQDLT*DPFLES
Trigger: TGATTCAAGAAATGGATCTCAGGTTAGATCTTGGGT...GGGTGTTCTTAGTTCTGCACTGGATTTGCTAGATTTGTTGGAAGCCTTTGTACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR TCA 90 bp ATGCTTCCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATTGCGCTCTTTTTATTCCCTaGAATGTACTGCTAGCCATG +
Preference number: 4 (lower is better)
Translates to: MLPKQVLEGSLGAVITYCALFIP*NVLLAM
Trigger: CATGGCTAGCAGTACATTTCAGGGAATAAAAAGAGC...GCAATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGGAAGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR TCA 90 bp GGACTGTCTGTTGGAAGCATAATACACTATCTAAGATGTTGGGAATTGTGTTTACTTCTTGTAGCTTTGTaGGGATCCACCTGGCATCCT +
Preference number: 4 (lower is better)
Translates to: GLSVGSIIHYLRCWELCLLLVAL*GSTWHP
Trigger: AGGATGCCAGGTGGATCCTCACAAAGCTACAAGAAG...TAAACACAATTCCCAACATCTTAGATAGTGTATTATGCTTCCAACAGACAGTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR TCA 90 bp CCAGAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGTTTGTGTTGGCTGAGCCATaGAAGCATCCACTGTCAATG +
Preference number: 4 (lower is better)
Translates to: PEYRVLEIISVICFPNRFVLAEP*KHPLSM
Trigger: CATTGACAGTGGATGCTTTCATGGCTCAGCCAACAC...AAACCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTCTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS-3UTR TCA 90 bp CCAGAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGTTTCTGAACTGTGTTGGCTaGGCCATGAAAGCATCCACT +
Preference number: 4 (lower is better)
Translates to: PEYRVLEIISVICFPNRFLNCVG*AMKAST
Trigger: AGTGGATGCTTTCATGGCTCAGCCAACACAGTTCAG...AAACCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTCTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS-3UTR TCA 90 bp GGACTGTCTGTTGGAAGCATAATACACTATCTAAGATGTTGGGAATTGTGTTTACCGAAAAGATTCCTCTaGACTGTGTTGGCTGAGCCA +
Preference number: 4 (lower is better)
Translates to: GLSVGSIIHYLRCWELCLPKRFL*TVLAEP
Trigger: TGGCTCAGCCAACACAGTTCAGAGGAATCTTTTCGG...TAAACACAATTCCCAACATCTTAGATAGTGTATTATGCTTCCAACAGACAGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS-3UTR TCA 90 bp AAATGGCAACCCTGTGTCTGGGAGGCACTGTACCAAATCCTTTACATACACAATGTTCATGTCACTATATaGCGTCTCAGTTTAAGAGTC +
Preference number: 4 (lower is better)
Translates to: KWQPCVWEALYQILYIHNVHVTI*RLSLRV
Trigger: GACTCTTAAACTGAGACGTCATATAGTGACATGAAC...ATTGTGTATGTAAAGGATTTGGTACAGTGCCTCCCAGACACAGGGTTGCCATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419472.1
CDS-3UTR TCA 90 bp GGTACAAAGGCTTCCAACAAATCTAGCAAATCCAGTGCAGAACTAAGAACACCCATACTGGTTTGCATGTaGACTGCTTATCAAATCCCA +
Preference number: 4 (lower is better)
Translates to: GTKASNKSSKSSAELRTPILVCM*TAYQIP
Trigger: TGGGATTTGATAAGCAGTTCACATGCAAACCAGTAT...GGGTGTTCTTAGTTCTGCACTGGATTTGCTAGATTTGTTGGAAGCCTTTGTACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR GCA 90 bp GGTACAAAGGCTTCCAACAAATCTAGCAAATCCAGTGCAGAACTAAGAACACCCGATCAGTTGTCTGCATaGTCAGATTTTGAAGGGAAA +
Preference number: 4 (lower is better)
Translates to: GTKASNKSSKSSAELRTPDQLSA*SDFEGK
Trigger: TTTCCCTTCAAAATCTGAGCATGCAGACAACTGATC...GGGTGTTCTTAGTTCTGCACTGGATTTGCTAGATTTGTTGGAAGCCTTTGTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR GCA 90 bp CCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATTGCTGTGTGCTGTTGCTGTCTTACTaGGAAATTCTTCCAGTTTTG +
Preference number: 4 (lower is better)
Translates to: PKQVLEGSLGAVITYCCVLLLSY*EILPVL
Trigger: CAAAACTGGAAGAATTTCGCAGTAAGACAGCAACAG...CACACAGCAATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR GCA 90 bp GCAGGAAGAGGGTCATGGCCATTTAAGCATTTTCAAAGGCAAAGCACAAGAATCTACACTGAGTTTTCGTaGTTCTCTCCAATTATCACC +
Preference number: 4 (lower is better)
Translates to: AGRGSWPFKHFQRQSTRIYTEFS*FSPIIT
Trigger: GGTGATAATTGGAGAGAAGCACGAAAACTCAGTGTA...GATTCTTGTGCTTTGCCTTTGAAAATGCTTAAATGGCCATGACCCTCTTCCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR GCA 90 bp CCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATTGCTGTGTGATTCATATCTGTGTATaGAGAACCAGCAGTTGCATC +
Preference number: 4 (lower is better)
Translates to: PKQVLEGSLGAVITYCCVIHICV*RTSSCI
Trigger: GATGCAACTGCTGGTTCTGCATACACAGATATGAAT...CACACAGCAATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR GCA 90 bp ATGCTTCCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATTGCTCTGGAACTCCTTTGTaGGAGTTCTTTTACACCAGT +
Preference number: 4 (lower is better)
Translates to: MLPKQVLEGSLGAVITYCSGTPL*EFFYTS
Trigger: ACTGGTGTAAAAGAACTCGCACAAAGGAGTTCCAGA...GCAATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGGAAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR GCA 90 bp GATTTTAGGGTACATAAACTTTATATGAGAGGGACTGTCTGTTGGAAGCATAATTCAGAAACTGGAGACTaGGGGATGACCACAACTGGG +
Preference number: 4 (lower is better)
Translates to: DFRVHKLYMRGTVCWKHNSETGD*GMTTTG
Trigger: CCCAGTTGTGGTCATCCCGCAGTCTCCAGTTTCTGA...ATTATGCTTCCAACAGACAGTCCCTCTCATATAAAGTTTATGTACCCTAAAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR GCA 90 bp GCAGGAAGAGGGTCATGGCCATTTAAGCATTTTCAAAGGCAAAGCACAAGAATCTATCATTCGAGGAGTTaGTTTCTTGACATGAGGTCT +
Preference number: 4 (lower is better)
Translates to: AGRGSWPFKHFQRQSTRIYHSRS*FLDMRS
Trigger: AGACCTCATGTCAAGAAAGCAACTCCTCGAATGATA...GATTCTTGTGCTTTGCCTTTGAAAATGCTTAAATGGCCATGACCCTCTTCCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR GCA 90 bp GCAGGAAGAGGGTCATGGCCATTTAAGCATTTTCAAAGGCAAAGCACAAGAATCAACAAGTCACAGGGCTaGAAAACAGTAGTGATTTTG +
Preference number: 4 (lower is better)
Translates to: AGRGSWPFKHFQRQSTRINKSQG*KTVVIL
Trigger: CAAAATCACTACTGTTTTGCAGCCCTGTGACTTGTT...GATTCTTGTGCTTTGCCTTTGAAAATGCTTAAATGGCCATGACCCTCTTCCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR GCA 90 bp GGTACAAAGGCTTCCAACAAATCTAGCAAATCCAGTGCAGAACTAAGAACACCCATAAGGACTATGAAATaGCACAACTGTCTGACCAGT +
Preference number: 4 (lower is better)
Translates to: GTKASNKSSKSSAELRTPIRTMK*HNCLTS
Trigger: ACTGGTCAGACAGTTGTGGCATTTCATAGTCCTTAT...GGGTGTTCTTAGTTCTGCACTGGATTTGCTAGATTTGTTGGAAGCCTTTGTACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR GCA 90 bp GCAGGAAGAGGGTCATGGCCATTTAAGCATTTTCAAAGGCAAAGCACAAGAATCTCTAACTTCTCAGTGTaGTTTACACTCATTGGCTTC +
Preference number: 4 (lower is better)
Translates to: AGRGSWPFKHFQRQSTRISNFSV*FTLIGF
Trigger: GAAGCCAATGAGTGTAAAGCACACTGAGAAGTTAGA...GATTCTTGTGCTTTGCCTTTGAAAATGCTTAAATGGCCATGACCCTCTTCCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR GCA 90 bp GCAGGAAGAGGGTCATGGCCATTTAAGCATTTTCAAAGGCAAAGCACAAGAATCTATCTGGGAATGTCCTaGAGATCTCATGACAATACT +
Preference number: 4 (lower is better)
Translates to: AGRGSWPFKHFQRQSTRIYLGMS*RSHDNT
Trigger: AGTATTGTCATGAGATCTGCAGGACATTCCCAGATA...GATTCTTGTGCTTTGCCTTTGAAAATGCTTAAATGGCCATGACCCTCTTCCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR GCA 90 bp GGTACAAAGGCTTCCAACAAATCTAGCAAATCCAGTGCAGAACTAAGAACACCCCTAAAACCAGCTGGTTaGTTATTCATGGCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: GTKASNKSSKSSAELRTPLKPAG*LFMASL
Trigger: AAGAGAAGCCATGAATAAGCAACCAGCTGGTTTTAG...GGGTGTTCTTAGTTCTGCACTGGATTTGCTAGATTTGTTGGAAGCCTTTGTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR GCA 90 bp ATGCTTCCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATTGCCTTCACTCGTTCCTTTaGTTCAATGCGCAATCTTCT +
Preference number: 4 (lower is better)
Translates to: MLPKQVLEGSLGAVITYCLHSFL*FNAQSS
Trigger: AGAAGATTGCGCATTGAAGCAAAGGAACGAGTGAAG...GCAATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGGAAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR GCA 90 bp GACACTACACCCAGGGAGGCAGGGGACTGTAATTTTTCTGAGAATGGTGAAATCGTCTGTATTGAGTCCTaGATACAGAATGTAAGTTAT +
Preference number: 4 (lower is better)
Translates to: DTTPREAGDCNFSENGEIVCIES*IQNVSY
Trigger: ATAACTTACATTCTGTATGCAGGACTCAATACAGAC...GATTTCACCATTCTCAGAAAAATTACAGTCCCCTGCCTCCCTGGGTGTAGTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS-3UTR GCA 90 bp CATCCAGAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGAGTGGGAGAAAAGTTTaGTGTAACAGCCAGAGTGGC +
Preference number: 4 (lower is better)
Translates to: HPEYRVLEIISVICFPNRSGRKV*CNSQSG
Trigger: GCCACTCTGGCTGTTACAGCAAACTTTTCTCCCACT...CCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTCTGGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS-3UTR GCA 90 bp GAACTAGAAACATTAAACTTGGCTCCATGTGGAGATGAATTATGGGCAGCCTCTTGCATCTTCTCAATGTaGTGGCCTTGCTTTTTGGAT +
Preference number: 4 (lower is better)
Translates to: ELETLNLAPCGDELWAASCIFSM*WPCFLD
Trigger: ATCCAAAAAGCAAGGCCAGCACATTGAGAAGATGCA...AGAGGCTGCCCATAATTCATCTCCACATGGAGCCAAGTTTAATGTTTCTAGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS-3UTR GCA 90 bp ATGGTGAATCAGCCAAAAGGTAGATGGTGCAGATTCAACGGACTCAAAAGGACAAAGTGTAGGAAATCCTaGAGCGATGCAGAAATAGAT +
Preference number: 4 (lower is better)
Translates to: MVNQPKGRWCRFNGLKRTKCRKS*SDAEID
Trigger: ATCTATTTCTGCATCGCTGCAGGATTTCCTACACTT...TGTCCTTTTGAGTCCGTTGAATCTGCACCATCTACCTTTTGGCTGATTCACCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS-3UTR GCA 90 bp GGTACAAAGGCTTCCAACAAATCTAGCAAATCCAGTGCAGAACTAAGAACACCCGGTTTGCATGTGAACTaGTTATCAAATCCCACAAGT +
Preference number: 4 (lower is better)
Translates to: GTKASNKSSKSSAELRTPGLHVN*LSNPTS
Trigger: ACTTGTGGGATTTGATAAGCAGTTCACATGCAAACC...GGGTGTTCTTAGTTCTGCACTGGATTTGCTAGATTTGTTGGAAGCCTTTGTACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR CCA 90 bp AGCGAGGGTTTAAGGAGCCTGAGAAGAATTTCACAACTATTGACTATACAGAGTTATCCAGTGCCATTCTaGAACTCCTTTGTGCGAGTT +
Preference number: 4 (lower is better)
Translates to: SEGLRSLRRISQLLTIQSYPVPF*NSFVRV
Trigger: AACTCGCACAAAGGAGTTCCAGAATGGCACTGGATA...ACTCTGTATAGTCAATAGTTGTGAAATTCTTCTCAGGCTCCTTAAACCCTCGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CCA 90 bp GGACTGTCTGTTGGAAGCATAATACACTATCTAAGATGTTGGGAATTGTGTTTACAAATCAATAACAGGTaGGGGAGAGCTCTGGCTCTC +
Preference number: 4 (lower is better)
Translates to: GLSVGSIIHYLRCWELCLQINNR*GRALAL
Trigger: GAGAGCCAGAGCTCTCCCCCACCTGTTATTGATTTG...TAAACACAATTCCCAACATCTTAGATAGTGTATTATGCTTCCAACAGACAGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CCA 90 bp GAACTAGAAACATTAAACTTGGCTCCATGTGGAGATGAATTATGGGCAGCCTCTGTTGCTCCTCCTGAATaGTGTGAAGCATTAGTAGTA +
Preference number: 4 (lower is better)
Translates to: ELETLNLAPCGDELWAASVAPPE*CEALVV
Trigger: TACTACTAATGCTTCACACCATTCAGGAGGAGCAAC...AGAGGCTGCCCATAATTCATCTCCACATGGAGCCAAGTTTAATGTTTCTAGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CCA 90 bp CATCCAGAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGTCCATGTTTGCACACTaGTTTCTACAGCAGTGCCTG +
Preference number: 4 (lower is better)
Translates to: HPEYRVLEIISVICFPNRSMFAH*FLQQCL
Trigger: CAGGCACTGCTGTAGAAACCAGTGTGCAAACATGGA...CCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTCTGGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CCA 90 bp GAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGTTTTGGGGGCAGGCTCTCACTTaGAGATCTTTAATGGCAGCA +
Preference number: 4 (lower is better)
Translates to: EYRVLEIISVICFPNRFWGQALT*RSLMAA
Trigger: TGCTGCCATTAAAGATCTCCAAGTGAGAGCCTGCCC...CCAAAACCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CCA 90 bp CAGAGAAGGATCACGAACATCTGTAAAGGAAGCCTGTTTAGGACCTGGACTATACATATCGATCACTTGTaGATCTGTACCTTTCTGAGT +
Preference number: 4 (lower is better)
Translates to: QRRITNICKGSLFRTWTIHIDHL*ICTFLS
Trigger: ACTCAGAAAGGTACAGATCCACAAGTGATCGATATG...TATAGTCCAGGTCCTAAACAGGCTTCCTTTACAGATGTTCGTGATCCTTCTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493341.1
CDS-3UTR CCA 90 bp GGTACAAAGGCTTCCAACAAATCTAGCAAATCCAGTGCAGAACTAAGAACACCCCATATCGATCACTTGTaGATCTGTACCTTTCTGAGT +
Preference number: 4 (lower is better)
Translates to: GTKASNKSSKSSAELRTPHIDHL*ICTFLS
Trigger: ACTCAGAAAGGTACAGATCCACAAGTGATCGATATG...GGGTGTTCTTAGTTCTGCACTGGATTTGCTAGATTTGTTGGAAGCCTTTGTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR CCA 90 bp TCCCATAAATGTGCAGTAGAAGAAGCCGTTTCTTCTGGGATGGTTTCCTTAGTTAGAAGCCGTTTCTTCTaGGATGGTTTCCTTAGTTGT +
Preference number: 4 (lower is better)
Translates to: SHKCAVEEAVSSGMVSLVRSRFF*DGFLSC
Trigger: ACAACTAAGGAAACCATCCCAGAAGAAACGGCTTCT...AACTAAGGAAACCATCCCAGAAGAAACGGCTTCTTCTACTGCACATTTATGGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493341.1
CDS-3UTR CCA 90 bp GCAGGAAGAGGGTCATGGCCATTTAAGCATTTTCAAAGGCAAAGCACAAGAATCGATACCAAGATTCCATaGTCTAAAATCCTCAGTCTG +
Preference number: 4 (lower is better)
Translates to: AGRGSWPFKHFQRQSTRIDTKIP*SKILSL
Trigger: CAGACTGAGGATTTTAGACCATGGAATCTTGGTATC...GATTCTTGTGCTTTGCCTTTGAAAATGCTTAAATGGCCATGACCCTCTTCCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR CCA 90 bp CCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATTGCTGTGTGATTTTAAATGTAGCCTaGCTTTACCCAACTGTGCAG +
Preference number: 4 (lower is better)
Translates to: PKQVLEGSLGAVITYCCVILNVA*LYPTVQ
Trigger: CTGCACAGTTGGGTAAAGCCAGGCTACATTTAAAAT...CACACAGCAATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CCA 90 bp GCAGGAAGAGGGTCATGGCCATTTAAGCATTTTCAAAGGCAAAGCACAAGAATCTGTGTTACTTCACCATaGCTTTTTCTACATCTCCAC +
Preference number: 4 (lower is better)
Translates to: AGRGSWPFKHFQRQSTRICVTSP*LFLHLH
Trigger: GTGGAGATGTAGAAAAAGCCATGGTGAAGTAACACA...GATTCTTGTGCTTTGCCTTTGAAAATGCTTAAATGGCCATGACCCTCTTCCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR CCA 90 bp GAACTAGAAACATTAAACTTGGCTCCATGTGGAGATGAATTATGGGCAGCCTCTATCTTGCCTTCTTCTTaGGCTTTGTTTCCCAAACCA +
Preference number: 4 (lower is better)
Translates to: ELETLNLAPCGDELWAASILPSS*ALFPKP
Trigger: TGGTTTGGGAAACAAAGCCCAAGAAGAAGGCAAGAT...AGAGGCTGCCCATAATTCATCTCCACATGGAGCCAAGTTTAATGTTTCTAGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CCA 90 bp GGTACAAAGGCTTCCAACAAATCTAGCAAATCCAGTGCAGAACTAAGAACACCCCATGGTGACCGACTTTaGAGGTTTAACAGGATAAAA +
Preference number: 4 (lower is better)
Translates to: GTKASNKSSKSSAELRTPHGDRL*RFNRIK
Trigger: TTTTATCCTGTTAAACCTCCAAAGTCGGTCACCATG...GGGTGTTCTTAGTTCTGCACTGGATTTGCTAGATTTGTTGGAAGCCTTTGTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR CCA 90 bp GGTACAAAGGCTTCCAACAAATCTAGCAAATCCAGTGCAGAACTAAGAACACCCTTAATACGTGATATCTaGGAATGTCCTGCAGATCTC +
Preference number: 4 (lower is better)
Translates to: GTKASNKSSKSSAELRTPLIRDI*ECPADL
Trigger: GAGATCTGCAGGACATTCCCAGATATCACGTATTAA...GGGTGTTCTTAGTTCTGCACTGGATTTGCTAGATTTGTTGGAAGCCTTTGTACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR CCA 90 bp TTGTCTAAGCAGATTCTAACTTCAAACTGTCTATTGTTCCAGATGCTACTTTGTCTTCAGGACCCTGGATaGCTCCCTGGTAAGGTTCAT +
Preference number: 4 (lower is better)
Translates to: LSKQILTSNCLLFQMLLCLQDPG*LPGKVH
Trigger: ATGAACCTTACCAGGGAGCCATCCAGGGTCCTGAAG...ACAAAGTAGCATCTGGAACAATAGACAGTTTGAAGTTAGAATCTGCTTAGACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR CCA 90 bp GGTACAAAGGCTTCCAACAAATCTAGCAAATCCAGTGCAGAACTAAGAACACCCTTCTCTAAAACCAGCTaGTTGCTTATTCATGGCTTC +
Preference number: 4 (lower is better)
Translates to: GTKASNKSSKSSAELRTPFSKTS*LLIHGF
Trigger: GAAGCCATGAATAAGCAACCAGCTGGTTTTAGAGAA...GGGTGTTCTTAGTTCTGCACTGGATTTGCTAGATTTGTTGGAAGCCTTTGTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR CCA 90 bp ATGGTGAATCAGCCAAAAGGTAGATGGTGCAGATTCAACGGACTCAAAAGGACAGCTGGCCTTGCTTTTTaGATAGTCCTGAAACAAATA +
Preference number: 4 (lower is better)
Translates to: MVNQPKGRWCRFNGLKRTAGLAF*IVLKQI
Trigger: TATTTGTTTCAGGACTATCCAAAAAGCAAGGCCAGC...TGTCCTTTTGAGTCCGTTGAATCTGCACCATCTACCTTTTGGCTGATTCACCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS-3UTR TCA 90 bp CCAGAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGTTTCATGGAACCCAGTATTaGTCAGTTGTCTGCATGCTC +
Preference number: 4 (lower is better)
Translates to: PEYRVLEIISVICFPNRFHGTQY*SVVCML
Trigger: GAGCATGCAGACAACTGATCAATACTGGGTTCCATG...AAACCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTCTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR TCA 90 bp GCAGGAAGAGGGTCATGGCCATTTAAGCATTTTCAAAGGCAAAGCACAAGAATCTGCCATCATATCAACTaGTTCAAGAAGCTCCATAAT +
Preference number: 4 (lower is better)
Translates to: AGRGSWPFKHFQRQSTRICHHIN*FKKLHN
Trigger: ATTATGGAGCTTCTTGAATCAGTTGATATGATGGCA...GATTCTTGTGCTTTGCCTTTGAAAATGCTTAAATGGCCATGACCCTCTTCCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR TCA 90 bp TTGTCTAAGCAGATTCTAACTTCAAACTGTCTATTGTTCCAGATGCTACTTTGTCATTGCATCATCCAATaGAGACAGGAGGCGGGGTTT +
Preference number: 4 (lower is better)
Translates to: LSKQILTSNCLLFQMLLCHCIIQ*RQEAGF
Trigger: AAACCCCGCCTCCTGTCTTCATTGGATGATGCAATG...ACAAAGTAGCATCTGGAACAATAGACAGTTTGAAGTTAGAATCTGCTTAGACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR TCA 90 bp CCAGAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGTTTACTCCAGTTGGAAACTaGAGAGGTTCTTCCAAGGGA +
Preference number: 4 (lower is better)
Translates to: PEYRVLEIISVICFPNRFTPVGN*RGSSKG
Trigger: TCCCTTGGAAGAACCTCTTCAGTTTCCAACTGGAGT...AAACCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTCTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR TCA 90 bp ATGGTGAATCAGCCAAAAGGTAGATGGTGCAGATTCAACGGACTCAAAAGGACAGTTTATTTCAGTTTCTaGAGGCCTCATAATCATCTC +
Preference number: 4 (lower is better)
Translates to: MVNQPKGRWCRFNGLKRTVYFSF*RPHNHL
Trigger: GAGATGATTATGAGGCCTTCAGAAACTGAAATAAAC...TGTCCTTTTGAGTCCGTTGAATCTGCACCATCTACCTTTTGGCTGATTCACCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS-3UTR TCA 90 bp GAACTAGAAACATTAAACTTGGCTCCATGTGGAGATGAATTATGGGCAGCCTCTGAGGAGTTGCTTTCTTaGCATGAGGTCTTTTATCAT +
Preference number: 4 (lower is better)
Translates to: ELETLNLAPCGDELWAASEELLS*HEVFYH
Trigger: ATGATAAAAGACCTCATGTCAAGAAAGCAACTCCTC...AGAGGCTGCCCATAATTCATCTCCACATGGAGCCAAGTTTAATGTTTCTAGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR TCA 90 bp GCAGGAAGAGGGTCATGGCCATTTAAGCATTTTCAAAGGCAAAGCACAAGAATCTCACACAACCATCTCTaGCTTTCCTGTACTTTATAT +
Preference number: 4 (lower is better)
Translates to: AGRGSWPFKHFQRQSTRISHNHL*LSCTLY
Trigger: ATATAAAGTACAGGAAAGTCAGAGATGGTTGTGTGA...GATTCTTGTGCTTTGCCTTTGAAAATGCTTAAATGGCCATGACCCTCTTCCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR TCA 90 bp GGTACAAAGGCTTCCAACAAATCTAGCAAATCCAGTGCAGAACTAAGAACACCCCAAATATACATTTCTTaGAAGACCGCATCAGTCACA +
Preference number: 4 (lower is better)
Translates to: GTKASNKSSKSSAELRTPQIYIS*KTASVT
Trigger: TGTGACTGATGCGGTCTTTCAAGAAATGTATATTTG...GGGTGTTCTTAGTTCTGCACTGGATTTGCTAGATTTGTTGGAAGCCTTTGTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR TCA 90 bp CCAGAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGTTTTTTTGCCTTTTCTCTTaGCTGGAAGAAACGGGCAGG +
Preference number: 4 (lower is better)
Translates to: PEYRVLEIISVICFPNRFFCLFS*LEETGR
Trigger: CCTGCCCGTTTCTTCCAGTCAAGAGAAAAGGCAAAA...AAACCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTCTGG
41% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR TCA 90 bp TGTAATATGCTTCCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTACTTCTAGCTCAAGCTaGCAGTGCAGATTTATTAGG +
Preference number: 4 (lower is better)
Translates to: CNMLPKQVLEGSLGAVITTSSSS*QCRFIR
Trigger: CCTAATAAATCTGCACTGTCAGCTTGAGCTAGAAGT...AGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGGAAGCATATTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR TCA 90 bp GGTACAAAGGCTTCCAACAAATCTAGCAAATCCAGTGCAGAACTAAGAACACCCCTAAAATCCTCAGTCTaGTCAATTTCTAAGGGTTCA +
Preference number: 4 (lower is better)
Translates to: GTKASNKSSKSSAELRTPLKSSV*SISKGS
Trigger: TGAACCCTTAGAAATTGATCAGACTGAGGATTTTAG...GGGTGTTCTTAGTTCTGCACTGGATTTGCTAGATTTGTTGGAAGCCTTTGTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR TCA 90 bp GCAGGAAGAGGGTCATGGCCATTTAAGCATTTTCAAAGGCAAAGCACAAGAATCCTTTCTTTTTCATCTTaGTACCAAGATTCCATGGTC +
Preference number: 4 (lower is better)
Translates to: AGRGSWPFKHFQRQSTRILSFSS*YQDSMV
Trigger: GACCATGGAATCTTGGTATCAAGATGAAAAAGAAAG...GATTCTTGTGCTTTGCCTTTGAAAATGCTTAAATGGCCATGACCCTCTTCCTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR TCA 90 bp GATTTTAGGGTACATAAACTTTATATGAGAGGGACTGTCTGTTGGAAGCATAATCTTTACGAAGTCAGCTaGAGATCCAGTGGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: DFRVHKLYMRGTVCWKHNLYEVS*RSSGSF
Trigger: GAAGCTGCCACTGGATCTTCAGCTGACTTCGTAAAG...ATTATGCTTCCAACAGACAGTCCCTCTCATATAAAGTTTATGTACCCTAAAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR TCA 90 bp AAACTTTATATGAGAGGGACTGTCTGTTGGAAGCATAATACACTATCTAAGATGCTTTACGAAGTCAGCTaGAGATCCAGTGGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: KLYMRGTVCWKHNTLSKMLYEVS*RSSGSF
Trigger: GAAGCTGCCACTGGATCTTCAGCTGACTTCGTAAAG...CATCTTAGATAGTGTATTATGCTTCCAACAGACAGTCCCTCTCATATAAAGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR TCA 90 bp TTGTCTAAGCAGATTCTAACTTCAAACTGTCTATTGTTCCAGATGCTACTTTGTCTTTACGAAGTCAGCTaGAGATCCAGTGGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: LSKQILTSNCLLFQMLLCLYEVS*RSSGSF
Trigger: GAAGCTGCCACTGGATCTTCAGCTGACTTCGTAAAG...ACAAAGTAGCATCTGGAACAATAGACAGTTTGAAGTTAGAATCTGCTTAGACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR TCA 90 bp GGTACAAAGGCTTCCAACAAATCTAGCAAATCCAGTGCAGAACTAAGAACACCCAACAGACAGTGGGACTaGAAAATGATTTCTTATCTG +
Preference number: 4 (lower is better)
Translates to: GTKASNKSSKSSAELRTPNRQWD*KMISYL
Trigger: CAGATAAGAAATCATTTTTCAGTCCCACTGTCTGTT...GGGTGTTCTTAGTTCTGCACTGGATTTGCTAGATTTGTTGGAAGCCTTTGTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR TCA 90 bp CAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATTGCTGTGTGTCTTCACTGGCTTCAGAAAAATaGATGATCGGTAAGATCCTA +
Preference number: 4 (lower is better)
Translates to: QVLEGSLGAVITYCCVSSLASEK*MIGKIL
Trigger: TAGGATCTTACCGATCATTCATTTTTCTGAAGCCAG...TGAAGACACACAGCAATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR TCA 90 bp GCAGGAAGAGGGTCATGGCCATTTAAGCATTTTCAAAGGCAAAGCACAAGAATCACCAACAGTATCAATTaGAAACTGATTGGACAACTC +
Preference number: 4 (lower is better)
Translates to: AGRGSWPFKHFQRQSTRITNSIN*KLIGQL
Trigger: GAGTTGTCCAATCAGTTTTCAATTGATACTGTTGGT...GATTCTTGTGCTTTGCCTTTGAAAATGCTTAAATGGCCATGACCCTCTTCCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR TCA 90 bp GCAGGAAGAGGGTCATGGCCATTTAAGCATTTTCAAAGGCAAAGCACAAGAATCCATTTAACAGCTCCATaGCTACCAACAGTATCAATT +
Preference number: 4 (lower is better)
Translates to: AGRGSWPFKHFQRQSTRIHLTAP*LPTVSI
Trigger: AATTGATACTGTTGGTAGTCATGGAGCTGTTAAATG...GATTCTTGTGCTTTGCCTTTGAAAATGCTTAAATGGCCATGACCCTCTTCCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR TCA 90 bp GCAGGAAGAGGGTCATGGCCATTTAAGCATTTTCAAAGGCAAAGCACAAGAATCTCCTTCTTCAGCCACTaGTATATGGTATTTGCTTTT +
Preference number: 4 (lower is better)
Translates to: AGRGSWPFKHFQRQSTRISFFSH*YMVFAF
Trigger: AAAAGCAAATACCATATATCAGTGGCTGAAGAAGGA...GATTCTTGTGCTTTGCCTTTGAAAATGCTTAAATGGCCATGACCCTCTTCCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR TCA 90 bp CCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATTGCTGTGTGGCTTCGTGTAATTGTTaGCAAGAGAAATTCCAACAT +
Preference number: 4 (lower is better)
Translates to: PKQVLEGSLGAVITYCCVASCNC*QEKFQH
Trigger: ATGTTGGAATTTCTCTTGTCAACAATTACACGAAGC...CACACAGCAATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR TCA 90 bp GGTACAAAGGCTTCCAACAAATCTAGCAAATCCAGTGCAGAACTAAGAACACCCGCTTCGTGTAATTGTTaGCAAGAGAAATTCCAACAT +
Preference number: 4 (lower is better)
Translates to: GTKASNKSSKSSAELRTPASCNC*QEKFQH
Trigger: ATGTTGGAATTTCTCTTGTCAACAATTACACGAAGC...GGGTGTTCTTAGTTCTGCACTGGATTTGCTAGATTTGTTGGAAGCCTTTGTACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR TCA 90 bp GAACTAGAAACATTAAACTTGGCTCCATGTGGAGATGAATTATGGGCAGCCTCTACAGCACCATGTATCTaGTTTTGGATCTGTATTCTG +
Preference number: 4 (lower is better)
Translates to: ELETLNLAPCGDELWAASTAPCI*FWICIL
Trigger: CAGAATACAGATCCAAAATCAGATACATGGTGCTGT...AGAGGCTGCCCATAATTCATCTCCACATGGAGCCAAGTTTAATGTTTCTAGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR TCA 90 bp CAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATTGCTGTGTGTCTTCAACCCAAGATCTAACCTaGGATCCATTTCTTGAATCA +
Preference number: 4 (lower is better)
Translates to: QVLEGSLGAVITYCCVSSTQDLT*DPFLES
Trigger: TGATTCAAGAAATGGATCTCAGGTTAGATCTTGGGT...TGAAGACACACAGCAATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR TCA 90 bp GGTACAAAGGCTTCCAACAAATCTAGCAAATCCAGTGCAGAACTAAGAACACCCCTTAATGGCCTGTTTTaGATAGTGTCTTATGACTTC +
Preference number: 4 (lower is better)
Translates to: GTKASNKSSKSSAELRTPLNGLF*IVSYDF
Trigger: GAAGTCATAAGACACTATTCAAAACAGGCCATTAAG...GGGTGTTCTTAGTTCTGCACTGGATTTGCTAGATTTGTTGGAAGCCTTTGTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR TCA 90 bp CATCCAGAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGGCTGCTCCTCCTTTTTaGGCTCCTTTGATTGGTTTT +
Preference number: 4 (lower is better)
Translates to: HPEYRVLEIISVICFPNRAAPPF*APLIGF
Trigger: AAAACCAATCAAAGGAGCTCAAAAAGGAGGAGCAGC...CCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTCTGGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR TCA 90 bp AATATGCTTCCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATATGACCTGTAACATTTaGTTTCCAGTCCCATCCCTC +
Preference number: 4 (lower is better)
Translates to: NMLPKQVLEGSLGAVITYMTCNI*FPVPSL
Trigger: GAGGGATGGGACTGGAAATCAAATGTTACAGGTCAT...ATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGGAAGCATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR TCA 90 bp TGTAATATGCTTCCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTCTGATGCAAGCTTTCTaGCTACCTCTACTGTTAAGT +
Preference number: 4 (lower is better)
Translates to: CNMLPKQVLEGSLGAVITLMQAF*LPLLLS
Trigger: ACTTAACAGTAGAGGTAGTCAGAAAGCTTGCATCAG...AGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGGAAGCATATTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS-3UTR TCA 90 bp CCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATTGCTGTGTGGATGTTTCTAAGAGATaGGCTAGGTGCATAGATATT +
Preference number: 4 (lower is better)
Translates to: PKQVLEGSLGAVITYCCVDVSKR*ARCIDI
Trigger: AATATCTATGCACCTAGCTCATCTCTTAGAAACATC...CACACAGCAATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS-3UTR TCA 90 bp CAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATTGCTGTGTGTCTTCAATTTGGTACACACTTTaGGCTTCTACAGGCAAACTA +
Preference number: 4 (lower is better)
Translates to: QVLEGSLGAVITYCCVSSIWYTL*ASTGKL
Trigger: TAGTTTGCCTGTAGAAGCTCAAAGTGTGTACCAAAT...TGAAGACACACAGCAATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS-3UTR TCA 90 bp CCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATTGCTGTGTGACTTTAGACCAATTATaGCAGTGGGAGAAAAGTTTG +
Preference number: 4 (lower is better)
Translates to: PKQVLEGSLGAVITYCCVTLDQL*QWEKSL
Trigger: CAAACTTTTCTCCCACTGTCATAATTGGTCTAAAGT...CACACAGCAATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS-3UTR TCA 90 bp AAATGGCAACCCTGTGTCTGGGAGGCACTGTACCAAATCCTTTACATACACAATTGTCTTTCTAAAAACTaGTCACACCCTTTGGAAACT +
Preference number: 4 (lower is better)
Translates to: KWQPCVWEALYQILYIHNCLSKN*SHPLET
Trigger: AGTTTCCAAAGGGTGTGATCAGTTTTTAGAAAGACA...ATTGTGTATGTAAAGGATTTGGTACAGTGCCTCCCAGACACAGGGTTGCCATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000419472.1
CDS-3UTR TCA 90 bp GCAGGAAGAGGGTCATGGCCATTTAAGCATTTTCAAAGGCAAAGCACAAGAATCGGTATAGCCTATATATaGTTACTAGTTACCTACAGC +
Preference number: 4 (lower is better)
Translates to: AGRGSWPFKHFQRQSTRIGIAYI*LLVTYS
Trigger: GCTGTAGGTAACTAGTAATCATATATAGGCTATACC...GATTCTTGTGCTTTGCCTTTGAAAATGCTTAAATGGCCATGACCCTCTTCCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR GCA 90 bp TGTAATATGCTTCCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTCAGTTCCTGTTGCTTTaGTTCCATGAGTTGTTTCTC +
Preference number: 4 (lower is better)
Translates to: CNMLPKQVLEGSLGAVITQFLLL*FHELFL
Trigger: GAGAAACAACTCATGGAAGCAAAGCAACAGGAACTG...AGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGGAAGCATATTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR GCA 90 bp ATGCTTCCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATTGCCTTTTCAGTTCCTGTTaGTTTGCTTCCATGAGTTGT +
Preference number: 4 (lower is better)
Translates to: MLPKQVLEGSLGAVITYCLFSSC*FASMSC
Trigger: ACAACTCATGGAAGCAAAGCAACAGGAACTGAAAAG...GCAATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGGAAGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR GCA 90 bp CAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATTGCTGTGTGTCTTCAGATCAGTTGTCTGCATaGTCAGATTTTGAAGGGAAA +
Preference number: 4 (lower is better)
Translates to: QVLEGSLGAVITYCCVSSDQLSA*SDFEGK
Trigger: TTTCCCTTCAAAATCTGAGCATGCAGACAACTGATC...TGAAGACACACAGCAATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR GCA 90 bp GGTACAAAGGCTTCCAACAAATCTAGCAAATCCAGTGCAGAACTAAGAACACCCAGTTCCAAATTGAAGTaGATGGGTACCAAAATATGC +
Preference number: 4 (lower is better)
Translates to: GTKASNKSSKSSAELRTPSSKLK*MGTKIC
Trigger: GCATATTTTGGTACCCATGCACTTCAATTTGGAACT...GGGTGTTCTTAGTTCTGCACTGGATTTGCTAGATTTGTTGGAAGCCTTTGTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR GCA 90 bp ATGCTTCCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATTGCATTCATATCTGTGTATaGAGAACCAGCAGTTGCATC +
Preference number: 4 (lower is better)
Translates to: MLPKQVLEGSLGAVITYCIHICV*RTSSCI
Trigger: GATGCAACTGCTGGTTCTGCATACACAGATATGAAT...GCAATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGGAAGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR GCA 90 bp TTGTCTAAGCAGATTCTAACTTCAAACTGTCTATTGTTCCAGATGCTACTTTGTAGCTGCCTGAACAGTTaGCTCAGCCAAGGCTTGTTT +
Preference number: 4 (lower is better)
Translates to: LSKQILTSNCLLFQMLLCSCLNS*LSQGLF
Trigger: AAACAAGCCTTGGCTGAGGCAACTGTTCAGGCAGCT...ACAAAGTAGCATCTGGAACAATAGACAGTTTGAAGTTAGAATCTGCTTAGACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR GCA 90 bp GAACTAGAAACATTAAACTTGGCTCCATGTGGAGATGAATTATGGGCAGCCTCTGATGTTAATATCCAGTaGCATTCTGGAACTCCTTTG +
Preference number: 4 (lower is better)
Translates to: ELETLNLAPCGDELWAASDVNIQ*HSGTPL
Trigger: CAAAGGAGTTCCAGAATGGCACTGGATATTAACATC...AGAGGCTGCCCATAATTCATCTCCACATGGAGCCAAGTTTAATGTTTCTAGTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR GCA 90 bp TCCCATAAATGTGCAGTAGAAGAAGCCGTTTCTTCTGGGATGGTTTCCTTAGTTGATGTTAATATCCAGTaGCATTCTGGAACTCCTTTG +
Preference number: 4 (lower is better)
Translates to: SHKCAVEEAVSSGMVSLVDVNIQ*HSGTPL
Trigger: CAAAGGAGTTCCAGAATGGCACTGGATATTAACATC...AACTAAGGAAACCATCCCAGAAGAAACGGCTTCTTCTACTGCACATTTATGGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493341.1
CDS-3UTR GCA 90 bp GAACTAGAAACATTAAACTTGGCTCCATGTGGAGATGAATTATGGGCAGCCTCTTATCATTCGAGGAGTTaGTTTCTTGACATGAGGTCT +
Preference number: 4 (lower is better)
Translates to: ELETLNLAPCGDELWAASYHSRS*FLDMRS
Trigger: AGACCTCATGTCAAGAAAGCAACTCCTCGAATGATA...AGAGGCTGCCCATAATTCATCTCCACATGGAGCCAAGTTTAATGTTTCTAGTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR GCA 90 bp TCCCATAAATGTGCAGTAGAAGAAGCCGTTTCTTCTGGGATGGTTTCCTTAGTTACATTTGCAACAGTCTaGAGAAATTCTACGCTTGCA +
Preference number: 4 (lower is better)
Translates to: SHKCAVEEAVSSGMVSLVTFATV*RNSTLA
Trigger: TGCAAGCGTAGAATTTCTGCAGACTGTTGCAAATGT...AACTAAGGAAACCATCCCAGAAGAAACGGCTTCTTCTACTGCACATTTATGGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493341.1
CDS-3UTR GCA 90 bp GAACTAGAAACATTAAACTTGGCTCCATGTGGAGATGAATTATGGGCAGCCTCTAACAAGTCACAGGGCTaGAAAACAGTAGTGATTTTG +
Preference number: 4 (lower is better)
Translates to: ELETLNLAPCGDELWAASNKSQG*KTVVIL
Trigger: CAAAATCACTACTGTTTTGCAGCCCTGTGACTTGTT...AGAGGCTGCCCATAATTCATCTCCACATGGAGCCAAGTTTAATGTTTCTAGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR GCA 90 bp GGTACAAAGGCTTCCAACAAATCTAGCAAATCCAGTGCAGAACTAAGAACACCCGTAATAACTGTAGAATaGTCGGCCAAATTCACTTCT +
Preference number: 4 (lower is better)
Translates to: GTKASNKSSKSSAELRTPVITVE*SAKFTS
Trigger: AGAAGTGAATTTGGCCGAGCATTCTACAGTTATTAC...GGGTGTTCTTAGTTCTGCACTGGATTTGCTAGATTTGTTGGAAGCCTTTGTACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR GCA 90 bp TGTAATATGCTTCCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTCGTAGAGCTATTACATaGGGCTGCAGAATTTTCATG +
Preference number: 4 (lower is better)
Translates to: CNMLPKQVLEGSLGAVITRRAIT*GCRIFM
Trigger: CATGAAAATTCTGCAGCCGCATGTAATAGCTCTACG...AGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGGAAGCATATTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR GCA 90 bp ATGCTTCCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATTGCTCATCAAAACTATACTaGCACTCACACGTGAGTTGT +
Preference number: 4 (lower is better)
Translates to: MLPKQVLEGSLGAVITYCSSKLY*HSHVSC
Trigger: ACAACTCACGTGTGAGTGGCAGTATAGTTTTGATGA...GCAATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGGAAGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR GCA 90 bp GGACTGTCTGTTGGAAGCATAATACACTATCTAAGATGTTGGGAATTGTGTTTAAGGGAACAGGCACTCTaGCTTAGTCCTCACACAATT +
Preference number: 4 (lower is better)
Translates to: GLSVGSIIHYLRCWELCLREQAL*LSPHTI
Trigger: AATTGTGTGAGGACTAAGGCAGAGTGCCTGTTCCCT...TAAACACAATTCCCAACATCTTAGATAGTGTATTATGCTTCCAACAGACAGTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS-3UTR GCA 90 bp TGTAATATGCTTCCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTCCAAAAGGTAGATGGTaGAGATTCAACGGACTCAAA +
Preference number: 4 (lower is better)
Translates to: CNMLPKQVLEGSLGAVITPKGRW*RFNGLK
Trigger: TTTGAGTCCGTTGAATCTGCACCATCTACCTTTTGG...AGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGGAAGCATATTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS-3UTR CCA 90 bp CAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATTGCTGTGTGTCTTCAACCACATCCATAACCTaGGGCAAACATTTACTTCAA +
Preference number: 4 (lower is better)
Translates to: QVLEGSLGAVITYCCVSSTTSIT*GKHLLQ
Trigger: TTGAAGTAAATGTTTGCCCCAGGTTATGGATGTGGT...TGAAGACACACAGCAATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CCA 90 bp CCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATTGCTGTGTGAGATACTTCAGTTACTaGTTCAGGTTTTGGAATGCT +
Preference number: 4 (lower is better)
Translates to: PKQVLEGSLGAVITYCCVRYFSY*FRFWNA
Trigger: AGCATTCCAAAACCTGAACCAGTAACTGAAGTATCT...CACACAGCAATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CCA 90 bp GGTACAAAGGCTTCCAACAAATCTAGCAAATCCAGTGCAGAACTAAGAACACCCAGATACTTCAGTTACTaGTTCAGGTTTTGGAATGCT +
Preference number: 4 (lower is better)
Translates to: GTKASNKSSKSSAELRTPRYFSY*FRFWNA
Trigger: AGCATTCCAAAACCTGAACCAGTAACTGAAGTATCT...GGGTGTTCTTAGTTCTGCACTGGATTTGCTAGATTTGTTGGAAGCCTTTGTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR CCA 90 bp GCAGGAAGAGGGTCATGGCCATTTAAGCATTTTCAAAGGCAAAGCACAAGAATCAAGAATGAACTCCATTaGTTTCAGCTGAGCATTTAC +
Preference number: 4 (lower is better)
Translates to: AGRGSWPFKHFQRQSTRIKNELH*FQLSIY
Trigger: GTAAATGCTCAGCTGAAACCAATGGAGTTCATTCTT...GATTCTTGTGCTTTGCCTTTGAAAATGCTTAAATGGCCATGACCCTCTTCCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR CCA 90 bp CAATGTTCATTTTTATCATCTCGCCTTTGGGTACCAATTCAGTTGTGGGAGCTAGTTGCTCCTCCTGAATaGTGTGAAGCATTAGTAGTA +
Preference number: 4 (lower is better)
Translates to: QCSFLSSRLWVPIQLWELVAPPE*CEALVV
Trigger: TACTACTAATGCTTCACACCATTCAGGAGGAGCAAC...TAGCTCCCACAACTGAATTGGTACCCAAAGGCGAGATGATAAAAATGAACATTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493341.1
CDS-3UTR CCA 90 bp GAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGTTTTGGTCCATGTTTGCACACTaGTTTCTACAGCAGTGCCTG +
Preference number: 4 (lower is better)
Translates to: EYRVLEIISVICFPNRFWSMFAH*FLQQCL
Trigger: CAGGCACTGCTGTAGAAACCAGTGTGCAAACATGGA...CCAAAACCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CCA 90 bp AAAGACATTTGCAACAGTCTGCAGAAATTCTACGCTTGCACAAATATACATTTCGGGCAGGCTCTCACTTaGAGATCTTTAATGGCAGCA +
Preference number: 4 (lower is better)
Translates to: KDICNSLQKFYACTNIHFGQALT*RSLMAA
Trigger: TGCTGCCATTAAAGATCTCCAAGTGAGAGCCTGCCC...GAAATGTATATTTGTGCAAGCGTAGAATTTCTGCAGACTGTTGCAAATGTCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493341.1
CDS-3UTR CCA 90 bp AAACTTTATATGAGAGGGACTGTCTGTTGGAAGCATAATACACTATCTAAGATGGCCTTTTCTCTTGACTaGAAGAAACGGGCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: KLYMRGTVCWKHNTLSKMAFSLD*KKRAGS
Trigger: AGAGCCTGCCCGTTTCTTCCAGTCAAGAGAAAAGGC...CATCTTAGATAGTGTATTATGCTTCCAACAGACAGTCCCTCTCATATAAAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CCA 90 bp TTGTCTAAGCAGATTCTAACTTCAAACTGTCTATTGTTCCAGATGCTACTTTGTGCCTTTTCTCTTGACTaGAAGAAACGGGCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: LSKQILTSNCLLFQMLLCAFSLD*KKRAGS
Trigger: AGAGCCTGCCCGTTTCTTCCAGTCAAGAGAAAAGGC...ACAAAGTAGCATCTGGAACAATAGACAGTTTGAAGTTAGAATCTGCTTAGACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR CCA 90 bp AGCGAGGGTTTAAGGAGCCTGAGAAGAATTTCACAACTATTGACTATACAGAGTTTATCATCTCGCCTTTaGGTACCAATTCAGTTGTGG +
Preference number: 4 (lower is better)
Translates to: SEGLRSLRRISQLLTIQSLSSRL*VPIQLW
Trigger: CCACAACTGAATTGGTACCCAAAGGCGAGATGATAA...ACTCTGTATAGTCAATAGTTGTGAAATTCTTCTCAGGCTCCTTAAACCCTCGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CCA 90 bp ATAAGTAATCCCTACTACCTCCACAATCCCTCATCACCCATTTCCAATCACTGTGATACCAAGATTCCATaGTCTAAAATCCTCAGTCTG +
Preference number: 4 (lower is better)
Translates to: ISNPYYLHNPSSPISNHCDTKIP*SKILSL
Trigger: CAGACTGAGGATTTTAGACCATGGAATCTTGGTATC...ACAGTGATTGGAAATGGGTGATGAGGGATTGTGGAGGTAGTAGGGATTACTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419472.1
CDS-3UTR CCA 90 bp CATCCAGAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGGTACATCTGTCAGTGTaGCACCAATACTCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: HPEYRVLEIISVICFPNRVHLSV*HQYSSA
Trigger: TGCTGAAGAGTATTGGTGCCACACTGACAGATGTAC...CCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTCTGGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CCA 90 bp CAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATTGCTGTGTGTCTTCATTCTCTAAAACCAGCTaGTTGCTTATTCATGGCTTC +
Preference number: 4 (lower is better)
Translates to: QVLEGSLGAVITYCCVSSFSKTS*LLIHGF
Trigger: GAAGCCATGAATAAGCAACCAGCTGGTTTTAGAGAA...TGAAGACACACAGCAATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CCA 90 bp ATGGTGAATCAGCCAAAAGGTAGATGGTGCAGATTCAACGGACTCAAAAGGACACCCATGAACAATGAATaGCTCTTTGGTAAATTCATC +
Preference number: 4 (lower is better)
Translates to: MVNQPKGRWCRFNGLKRTPMNNE*LFGKFI
Trigger: GATGAATTTACCAAAGAGCCATTCATTGTTCATGGG...TGTCCTTTTGAGTCCGTTGAATCTGCACCATCTACCTTTTGGCTGATTCACCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS-3UTR CCA 90 bp CAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATTGCTGTGTGTCTTCAAAAGATTTATTCACTTaGAGGCCACAGGATAGTTGC +
Preference number: 4 (lower is better)
Translates to: QVLEGSLGAVITYCCVSSKDLFT*RPQDSC
Trigger: GCAACTATCCTGTGGCCTCCAAGTGAATAAATCTTT...TGAAGACACACAGCAATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS-3UTR TCA 90 bp TGTAATATGCTTCCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTAATGGTACATCCAGTTaGCTCAGGGCATTTTCTTTA +
Preference number: 4 (lower is better)
Translates to: CNMLPKQVLEGSLGAVITNGTSS*LRAFSL
Trigger: TAAAGAAAATGCCCTGAGTCAACTGGATGTACCATT...AGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGGAAGCATATTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR TCA 90 bp ATGCTTCCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATTGCTGCCATCATATCAACTaGTTCAAGAAGCTCCATAAT +
Preference number: 4 (lower is better)
Translates to: MLPKQVLEGSLGAVITYCCHHIN*FKKLHN
Trigger: ATTATGGAGCTTCTTGAATCAGTTGATATGATGGCA...GCAATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGGAAGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR TCA 90 bp CATCCAGAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGTCAAGAGTTTCAGGTTaGACATCTGGTTGCTGTTCA +
Preference number: 4 (lower is better)
Translates to: HPEYRVLEIISVICFPNRSRVSG*TSGCCS
Trigger: TGAACAGCAACCAGATGTTCAACCTGAAACTCTTGA...CCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTCTGGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR TCA 90 bp TGTAATATGCTTCCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTCCTCTTTTGGAGGTCTaGAGAATTCCACTATACTAT +
Preference number: 4 (lower is better)
Translates to: CNMLPKQVLEGSLGAVITPLLEV*RIPLYY
Trigger: ATAGTATAGTGGAATTCTTCAGACCTCCAAAAGAGG...AGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGGAAGCATATTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR TCA 90 bp TCCCATAAATGTGCAGTAGAAGAAGCCGTTTCTTCTGGGATGGTTTCCTTAGTTTCACACAACCATCTCTaGCTTTCCTGTACTTTATAT +
Preference number: 4 (lower is better)
Translates to: SHKCAVEEAVSSGMVSLVSHNHL*LSCTLY
Trigger: ATATAAAGTACAGGAAAGTCAGAGATGGTTGTGTGA...AACTAAGGAAACCATCCCAGAAGAAACGGCTTCTTCTACTGCACATTTATGGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493341.1
CDS-3UTR TCA 90 bp GAAAGACATTTGCAACAGTCTGCAGAAATTCTACGCTTGCACAAATATACATTTTTTTGCCTTTTCTCTTaGCTGGAAGAAACGGGCAGG +
Preference number: 4 (lower is better)
Translates to: ERHLQQSAEILRLHKYTFFCLFS*LEETGR
Trigger: CCTGCCCGTTTCTTCCAGTCAAGAGAAAAGGCAAAA...AAATGTATATTTGTGCAAGCGTAGAATTTCTGCAGACTGTTGCAAATGTCTTTC
40% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000493341.1
CDS-3UTR TCA 90 bp TTAGTGTCAGGGATTTTACTGACATATCGATCACTTGTGGATCTGTACCTTTCTATAGGTACTGTTCTATaGCCAATTCCAGCCTCAAGA +
Preference number: 4 (lower is better)
Translates to: LVSGILLTYRSLVDLYLSIGTVL*PIPASR
Trigger: TCTTGAGGCTGGAATTGGTCATAGAACAGTACCTAT...AGAAAGGTACAGATCCACAAGTGATCGATATGTCAGTAAAATCCCTGACACTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493341.1
CDS-3UTR TCA 90 bp ATGCTTCCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATTGCCTTTCTTTTTCATCTTaGTACCAAGATTCCATGGTC +
Preference number: 4 (lower is better)
Translates to: MLPKQVLEGSLGAVITYCLSFSS*YQDSMV
Trigger: GACCATGGAATCTTGGTATCAAGATGAAAAAGAAAG...GCAATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGGAAGCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR TCA 90 bp GAACTAGAAACATTAAACTTGGCTCCATGTGGAGATGAATTATGGGCAGCCTCTCTTTCTTTTTCATCTTaGTACCAAGATTCCATGGTC +
Preference number: 4 (lower is better)
Translates to: ELETLNLAPCGDELWAASLSFSS*YQDSMV
Trigger: GACCATGGAATCTTGGTATCAAGATGAAAAAGAAAG...AGAGGCTGCCCATAATTCATCTCCACATGGAGCCAAGTTTAATGTTTCTAGTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR TCA 90 bp ATAAGTAATCCCTACTACCTCCACAATCCCTCATCACCCATTTCCAATCACTGTCTTTCTTTTTCATCTTaGTACCAAGATTCCATGGTC +
Preference number: 4 (lower is better)
Translates to: ISNPYYLHNPSSPISNHCLSFSS*YQDSMV
Trigger: GACCATGGAATCTTGGTATCAAGATGAAAAAGAAAG...ACAGTGATTGGAAATGGGTGATGAGGGATTGTGGAGGTAGTAGGGATTACTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000419472.1
CDS-3UTR TCA 90 bp ATAAGTAATCCCTACTACCTCCACAATCCCTCATCACCCATTTCCAATCACTGTAACAGACAGTGGGACTaGAAAATGATTTCTTATCTG +
Preference number: 4 (lower is better)
Translates to: ISNPYYLHNPSSPISNHCNRQWD*KMISYL
Trigger: CAGATAAGAAATCATTTTTCAGTCCCACTGTCTGTT...ACAGTGATTGGAAATGGGTGATGAGGGATTGTGGAGGTAGTAGGGATTACTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419472.1
CDS-3UTR TCA 90 bp CAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATTGCTGTGTGTCTTCACTTAATGGCCTGTTTTaGATAGTGTCTTATGACTTC +
Preference number: 4 (lower is better)
Translates to: QVLEGSLGAVITYCCVSSLNGLF*IVSYDF
Trigger: GAAGTCATAAGACACTATTCAAAACAGGCCATTAAG...TGAAGACACACAGCAATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR TCA 90 bp GAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGTTTTGGATGACCTGTAACATTTaGTTTCCAGTCCCATCCCTC +
Preference number: 4 (lower is better)
Translates to: EYRVLEIISVICFPNRFWMTCNI*FPVPSL
Trigger: GAGGGATGGGACTGGAAATCAAATGTTACAGGTCAT...CCAAAACCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR TCA 90 bp AGCGAGGGTTTAAGGAGCCTGAGAAGAATTTCACAACTATTGACTATACAGAGTATCACTCAGGGAGTTTaGAATAAGCATGACAGAAGT +
Preference number: 4 (lower is better)
Translates to: SEGLRSLRRISQLLTIQSITQGV*NKHDRS
Trigger: ACTTCTGTCATGCTTATTTCAAACTCCCTGAGTGAT...ACTCTGTATAGTCAATAGTTGTGAAATTCTTCTCAGGCTCCTTAAACCCTCGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR GCA 90 bp GCAGGAAGAGGGTCATGGCCATTTAAGCATTTTCAAAGGCAAAGCACAAGAATCAAATTTTATTGCTTGTaGTCCTGGTCTTTGCACAAT +
Preference number: 4 (lower is better)
Translates to: AGRGSWPFKHFQRQSTRIKFYCL*SWSLHN
Trigger: ATTGTGCAAAGACCAGGAGCACAAGCAATAAAATTT...GATTCTTGTGCTTTGCCTTTGAAAATGCTTAAATGGCCATGACCCTCTTCCTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR GCA 90 bp GGTACAAAGGCTTCCAACAAATCTAGCAAATCCAGTGCAGAACTAAGAACACCCAGTTTCAAATTTTATTaGTTGTGCTCCTGGTCTTTG +
Preference number: 4 (lower is better)
Translates to: GTKASNKSSKSSAELRTPSFKFY*LCSWSL
Trigger: CAAAGACCAGGAGCACAAGCAATAAAATTTGAAACT...GGGTGTTCTTAGTTCTGCACTGGATTTGCTAGATTTGTTGGAAGCCTTTGTACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR GCA 90 bp TGTAATATGCTTCCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTACACTGAGTTTTCGTaGTTCTCTCCAATTATCACC +
Preference number: 4 (lower is better)
Translates to: CNMLPKQVLEGSLGAVITYTEFS*FSPIIT
Trigger: GGTGATAATTGGAGAGAAGCACGAAAACTCAGTGTA...AGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGGAAGCATATTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR GCA 90 bp GAACTAGAAACATTAAACTTGGCTCCATGTGGAGATGAATTATGGGCAGCCTCTAGTTCCAAATTGAAGTaGATGGGTACCAAAATATGC +
Preference number: 4 (lower is better)
Translates to: ELETLNLAPCGDELWAASSSKLK*MGTKIC
Trigger: GCATATTTTGGTACCCATGCACTTCAATTTGGAACT...AGAGGCTGCCCATAATTCATCTCCACATGGAGCCAAGTTTAATGTTTCTAGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR GCA 90 bp AATATGCTTCCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATTCTGGAACTCCTTTGTaGGAGTTCTTTTACACCAGT +
Preference number: 4 (lower is better)
Translates to: NMLPKQVLEGSLGAVITYSGTPL*EFFYTS
Trigger: ACTGGTGTAAAAGAACTCGCACAAAGGAGTTCCAGA...ATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGGAAGCATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR GCA 90 bp TTGAAAGACCGCATCAGTCACACAACCATCTCTGACTTTCCTGTACTTTATATCTATCATTCGAGGAGTTaGTTTCTTGACATGAGGTCT +
Preference number: 4 (lower is better)
Translates to: LKDRISHTTISDFPVLYIYHSRS*FLDMRS
Trigger: AGACCTCATGTCAAGAAAGCAACTCCTCGAATGATA...GATATAAAGTACAGGAAAGTCAGAGATGGTTGTGTGACTGATGCGGTCTTTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493341.1
CDS-3UTR GCA 90 bp GAATCAATGTTCATTTTTATCATCTCGCCTTTGGGTACCAATTCAGTTGTGGGATTAGCAGTCCATGTTTaGACACTGGTTTCTACAGCA +
Preference number: 4 (lower is better)
Translates to: ESMFIFIISPLGTNSVVGLAVHV*TLVSTA
Trigger: TGCTGTAGAAACCAGTGTGCAAACATGGACTGCTAA...TCCCACAACTGAATTGGTACCCAAAGGCGAGATGATAAAAATGAACATTGATTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493341.1
CDS-3UTR GCA 90 bp ATGCTTCCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATTGCATAGGTGGCCACAAATaGATTATGTATGGTAAATCC +
Preference number: 4 (lower is better)
Translates to: MLPKQVLEGSLGAVITYCIGGHK*IMYGKS
Trigger: GGATTTACCATACATAATGCATTTGTGGCCACCTAT...GCAATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGGAAGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR GCA 90 bp AGCGAGGGTTTAAGGAGCCTGAGAAGAATTTCACAACTATTGACTATACAGAGTATAAGGACTATGAAATaGCACAACTGTCTGACCAGT +
Preference number: 4 (lower is better)
Translates to: SEGLRSLRRISQLLTIQSIRTMK*HNCLTS
Trigger: ACTGGTCAGACAGTTGTGGCATTTCATAGTCCTTAT...ACTCTGTATAGTCAATAGTTGTGAAATTCTTCTCAGGCTCCTTAAACCCTCGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR GCA 90 bp CCAGAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGTTTCAAAAGGGGATACACTaGTCCAAATCAAGAGAGAGC +
Preference number: 4 (lower is better)
Translates to: PEYRVLEIISVICFPNRFQKGIH*SKSRES
Trigger: GCTCTCTCTTGATTTGGAGCAGTGTATCCCCTTTTG...AAACCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTCTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR GCA 90 bp AATATGCTTCCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATCGTAGAGCTATTACATaGGGCTGCAGAATTTTCATG +
Preference number: 4 (lower is better)
Translates to: NMLPKQVLEGSLGAVITYRRAIT*GCRIFM
Trigger: CATGAAAATTCTGCAGCCGCATGTAATAGCTCTACG...ATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGGAAGCATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR GCA 90 bp TGTAATATGCTTCCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATCTGGGAATGTCCTaGAGATCTCATGACAATACT +
Preference number: 4 (lower is better)
Translates to: CNMLPKQVLEGSLGAVITYLGMS*RSHDNT
Trigger: AGTATTGTCATGAGATCTGCAGGACATTCCCAGATA...AGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGGAAGCATATTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR GCA 90 bp GCAGGAAGAGGGTCATGGCCATTTAAGCATTTTCAAAGGCAAAGCACAAGAATCATGAGTACATACATCTaGTTAATGGCCTGTTTTGAA +
Preference number: 4 (lower is better)
Translates to: AGRGSWPFKHFQRQSTRIMSTYI*LMACFE
Trigger: TTCAAAACAGGCCATTAAGCAGATGTATGTACTCAT...GATTCTTGTGCTTTGCCTTTGAAAATGCTTAAATGGCCATGACCCTCTTCCTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR GCA 90 bp TGTAATATGCTTCCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTCTAAAACCAGCTGGTTaGTTATTCATGGCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: CNMLPKQVLEGSLGAVITLKPAG*LFMASL
Trigger: AAGAGAAGCCATGAATAAGCAACCAGCTGGTTTTAG...AGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGGAAGCATATTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR GCA 90 bp AATATGCTTCCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATTTTAAAGAAACCAGCTaGTCCTCCTTTTTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: NMLPKQVLEGSLGAVITYFKETS*SSFLSS
Trigger: GGAGCTCAAAAAGGAGGAGCAGCTGGTTTCTTTAAA...ATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGGAAGCATATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR GCA 90 bp GATTTTAGGGTACATAAACTTTATATGAGAGGGACTGTCTGTTGGAAGCATAATCCTGAGTTGTGGATCTaGTGCTCCTTATCTAAGGTC +
Preference number: 4 (lower is better)
Translates to: DFRVHKLYMRGTVCWKHNPELWI*CSLSKV
Trigger: GACCTTAGATAAGGAGCAGCAGATCCACAACTCAGG...ATTATGCTTCCAACAGACAGTCCCTCTCATATAAAGTTTATGTACCCTAAAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS-3UTR GCA 90 bp GAACTAGAAACATTAAACTTGGCTCCATGTGGAGATGAATTATGGGCAGCCTCTATTTTTAAAGGCCTTTaGCACCTGTATGGTGAATCA +
Preference number: 4 (lower is better)
Translates to: ELETLNLAPCGDELWAASIFKGL*HLYGES
Trigger: TGATTCACCATACAGGTGGCAAAGGCCTTTAAAAAT...AGAGGCTGCCCATAATTCATCTCCACATGGAGCCAAGTTTAATGTTTCTAGTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS-3UTR GCA 90 bp CAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATTGCTGTGTGTCTTCAGCAGTCATCTTACCATaGAATCCAAATCTACCAATA +
Preference number: 4 (lower is better)
Translates to: QVLEGSLGAVITYCCVSSAVILP*NPNLPI
Trigger: TATTGGTAGATTTGGATTGCATGGTAAGATGACTGC...TGAAGACACACAGCAATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS-3UTR GCA 90 bp AAATGGCAACCCTGTGTCTGGGAGGCACTGTACCAAATCCTTTACATACACAATGGCACTAAATCAGTTTaGCGATACCTCTATATAATA +
Preference number: 4 (lower is better)
Translates to: KWQPCVWEALYQILYIHNGTKSV*RYLYII
Trigger: TATTATATAGAGGTATCGGCAAACTGATTTAGTGCC...ATTGTGTATGTAAAGGATTTGGTACAGTGCCTCCCAGACACAGGGTTGCCATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419472.1
CDS-3UTR CCA 90 bp GGTACAAAGGCTTCCAACAAATCTAGCAAATCCAGTGCAGAACTAAGAACACCCTTTGAACTTCCTATATaGCAGATTTTGTGCCATCAT +
Preference number: 4 (lower is better)
Translates to: GTKASNKSSKSSAELRTPFELPI*QILCHH
Trigger: ATGATGGCACAAAATCTGCCATATAGGAAGTTCAAA...GGGTGTTCTTAGTTCTGCACTGGATTTGCTAGATTTGTTGGAAGCCTTTGTACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR CCA 90 bp CATCCAGAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGCTAGTGGCACTGTATTaGTCTTTTGTTACAGCAGGT +
Preference number: 4 (lower is better)
Translates to: HPEYRVLEIISVICFPNRLVALY*SFVTAG
Trigger: ACCTGCTGTAACAAAAGACCAATACAGTGCCACTAG...CCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTCTGGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CCA 90 bp GAATCAATGTTCATTTTTATCATCTCGCCTTTGGGTACCAATTCAGTTGTGGGATTATCATCTCGCCTTTaGGTACCAATTCAGTTGTGG +
Preference number: 4 (lower is better)
Translates to: ESMFIFIISPLGTNSVVGLSSRL*VPIQLW
Trigger: CCACAACTGAATTGGTACCCAAAGGCGAGATGATAA...TCCCACAACTGAATTGGTACCCAAAGGCGAGATGATAAAAATGAACATTGATTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493341.1
CDS-3UTR CCA 90 bp CCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATTGCTGTGTGGATCTGACTCAACAATaGCCATTTTTGCTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: PKQVLEGSLGAVITYCCVDLTQQ*PFLLSF
Trigger: AAAAGAAAGCAAAAATGGCCATTGTTGAGTCAGATC...CACACAGCAATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CCA 90 bp CTCCAAAAGAGACATGTATCAGAAAAGTGTAAACGGCTGGGTGTACTGGCTCATGATCTGACTCAACAATaGCCATTTTTGCTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: LQKRHVSEKCKRLGVLAHDLTQQ*PFLLSF
Trigger: AAAAGAAAGCAAAAATGGCCATTGTTGAGTCAGATC...ATGAGCCAGTACACCCAGCCGTTTACACTTTTCTGATACATGTCTCTTTTGGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000419472.1
CDS-3UTR CCA 90 bp GCAGGAAGAGGGTCATGGCCATTTAAGCATTTTCAAAGGCAAAGCACAAGAATCGATCTGACTCAACAATaGCCATTTTTGCTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: AGRGSWPFKHFQRQSTRIDLTQQ*PFLLSF
Trigger: AAAAGAAAGCAAAAATGGCCATTGTTGAGTCAGATC...GATTCTTGTGCTTTGCCTTTGAAAATGCTTAAATGGCCATGACCCTCTTCCTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR CCA 90 bp CCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATTGCTGTGTGAATGATCATTGTCCTTaGTTCGGATATAATCCATAC +
Preference number: 4 (lower is better)
Translates to: PKQVLEGSLGAVITYCCVNDHCP*FGYNPY
Trigger: GTATGGATTATATCCGAACCAAGGACAATGATCATT...CACACAGCAATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CCA 90 bp CTCCAAAAGAGACATGTATCAGAAAAGTGTAAACGGCTGGGTGTACTGGCTCATAATGATCATTGTCCTTaGTTCGGATATAATCCATAC +
Preference number: 4 (lower is better)
Translates to: LQKRHVSEKCKRLGVLAHNDHCP*FGYNPY
Trigger: GTATGGATTATATCCGAACCAAGGACAATGATCATT...ATGAGCCAGTACACCCAGCCGTTTACACTTTTCTGATACATGTCTCTTTTGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419472.1
CDS-3UTR CCA 90 bp TGTAATATGCTTCCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTATTTTAAATGTAGCCTaGCTTTACCCAACTGTGCAG +
Preference number: 4 (lower is better)
Translates to: CNMLPKQVLEGSLGAVITILNVA*LYPTVQ
Trigger: CTGCACAGTTGGGTAAAGCCAGGCTACATTTAAAAT...AGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGGAAGCATATTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CCA 90 bp AATATGCTTCCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATATCTTGCCTTCTTCTTaGGCTTTGTTTCCCAAACCA +
Preference number: 4 (lower is better)
Translates to: NMLPKQVLEGSLGAVITYILPSS*ALFPKP
Trigger: TGGTTTGGGAAACAAAGCCCAAGAAGAAGGCAAGAT...ATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGGAAGCATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CCA 90 bp AATATGCTTCCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATGTGCTTTACACTCATTaGCTTCCATCTTGCCTTCTT +
Preference number: 4 (lower is better)
Translates to: NMLPKQVLEGSLGAVITYVLYTH*LPSCLL
Trigger: AAGAAGGCAAGATGGAAGCCAATGAGTGTAAAGCAC...ATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGGAAGCATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CCA 90 bp AGCGAGGGTTTAAGGAGCCTGAGAAGAATTTCACAACTATTGACTATACAGAGTTTAATACGTGATATCTaGGAATGTCCTGCAGATCTC +
Preference number: 4 (lower is better)
Translates to: SEGLRSLRRISQLLTIQSLIRDI*ECPADL
Trigger: GAGATCTGCAGGACATTCCCAGATATCACGTATTAA...ACTCTGTATAGTCAATAGTTGTGAAATTCTTCTCAGGCTCCTTAAACCCTCGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CCA 90 bp TGTAATATGCTTCCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTTCTCTAAAACCAGCTaGTTGCTTATTCATGGCTTC +
Preference number: 4 (lower is better)
Translates to: CNMLPKQVLEGSLGAVITFSKTS*LLIHGF
Trigger: GAAGCCATGAATAAGCAACCAGCTGGTTTTAGAGAA...AGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGGAAGCATATTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CCA 90 bp ATGCTTCCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATTGCACAATACACCACGTCTaGTTATCATTAGCATATCTG +
Preference number: 4 (lower is better)
Translates to: MLPKQVLEGSLGAVITYCTIHHV*LSLAYL
Trigger: CAGATATGCTAATGATAACCAGACGTGGTGTATTGT...GCAATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGGAAGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CCA 90 bp GAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGTTTTGGTGTGGAGATGAATTATaGGCAGCCTCTCCACCATTA +
Preference number: 4 (lower is better)
Translates to: EYRVLEIISVICFPNRFWCGDEL*AASPPL
Trigger: TAATGGTGGAGAGGCTGCCCATAATTCATCTCCACA...CCAAAACCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CCA 90 bp AGCGAGGGTTTAAGGAGCCTGAGAAGAATTTCACAACTATTGACTATACAGAGTAGAGGGACTGTCTGTTaGAAGCATAATACACTATCT +
Preference number: 4 (lower is better)
Translates to: SEGLRSLRRISQLLTIQSRGTVC*KHNTLS
Trigger: AGATAGTGTATTATGCTTCCAACAGACAGTCCCTCT...ACTCTGTATAGTCAATAGTTGTGAAATTCTTCTCAGGCTCCTTAAACCCTCGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CCA 90 bp CAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATTGCTGTGTGTCTTCAAAATTCTCAATCTATTaGCAACGGGACAGGTTATTG +
Preference number: 4 (lower is better)
Translates to: QVLEGSLGAVITYCCVSSKFSIY*QRDRLL
Trigger: CAATAACCTGTCCCGTTGCCAATAGATTGAGAATTT...TGAAGACACACAGCAATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CCA 90 bp ATGGTGAATCAGCCAAAAGGTAGATGGTGCAGATTCAACGGACTCAAAAGGACAAAGGTGCAAAGATCTTaGACAAAAACCAAGAAAGAA +
Preference number: 4 (lower is better)
Translates to: MVNQPKGRWCRFNGLKRTKVQRS*TKTKKE
Trigger: TTCTTTCTTGGTTTTTGTCCAAGATCTTTGCACCTT...TGTCCTTTTGAGTCCGTTGAATCTGCACCATCTACCTTTTGGCTGATTCACCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS-3UTR CCA 90 bp CCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATTGCTGTGTGAAGGTGCAAAGATCTTaGACAAAAACCAAGAAAGAA +
Preference number: 4 (lower is better)
Translates to: PKQVLEGSLGAVITYCCVKVQRS*TKTKKE
Trigger: TTCTTTCTTGGTTTTTGTCCAAGATCTTTGCACCTT...CACACAGCAATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CCA 90 bp CAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATTGCTGTGTGTCTTCATTAGCAAATAATACATaGAAGGGGCACAAGACTCAA +
Preference number: 4 (lower is better)
Translates to: QVLEGSLGAVITYCCVSSLANNT*KGHKTQ
Trigger: TTGAGTCTTGTGCCCCTTCCATGTATTATTTGCTAA...TGAAGACACACAGCAATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS-3UTR CCA 90 bp CATCCAGAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGATTATGATTTTCTGGTaGAGAGTTGGCAGGGAACAG +
Preference number: 4 (lower is better)
Translates to: HPEYRVLEIISVICFPNRIMIFW*RVGREQ
Trigger: CTGTTCCCTGCCAACTCTCCACCAGAAAATCATAAT...CCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTCTGGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS-3UTR CCA 90 bp GATTTTAGGGTACATAAACTTTATATGAGAGGGACTGTCTGTTGGAAGCATAATAATGGACTAGGATTGTaGAGGAGAGGGGTAGGTAAG +
Preference number: 4 (lower is better)
Translates to: DFRVHKLYMRGTVCWKHNNGLGL*RRGVGK
Trigger: CTTACCTACCCCTCTCCTCCACAATCCTAGTCCATT...ATTATGCTTCCAACAGACAGTCCCTCTCATATAAAGTTTATGTACCCTAAAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS-3UTR CCA 90 bp GATTTTAGGGTACATAAACTTTATATGAGAGGGACTGTCTGTTGGAAGCATAATTCCTCTGAACTGTGTTaGCTGAGCCATGAAAGCATC +
Preference number: 4 (lower is better)
Translates to: DFRVHKLYMRGTVCWKHNSSELC*LSHESI
Trigger: GATGCTTTCATGGCTCAGCCAACACAGTTCAGAGGA...ATTATGCTTCCAACAGACAGTCCCTCTCATATAAAGTTTATGTACCCTAAAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS-3UTR CCA 90 bp AAACTTTATATGAGAGGGACTGTCTGTTGGAAGCATAATACACTATCTAAGATGCAGCCAAAAGGTAGATaGTGCAGATTCAACGGACTC +
Preference number: 4 (lower is better)
Translates to: KLYMRGTVCWKHNTLSKMQPKGR*CRFNGL
Trigger: GAGTCCGTTGAATCTGCACCATCTACCTTTTGGCTG...CATCTTAGATAGTGTATTATGCTTCCAACAGACAGTCCCTCTCATATAAAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS-3UTR CCA 90 bp GCAGGAAGAGGGTCATGGCCATTTAAGCATTTTCAAAGGCAAAGCACAAGAATCTATAAAAGCTACCAGTaGTTTAATAACCCCACAACA +
Preference number: 4 (lower is better)
Translates to: AGRGSWPFKHFQRQSTRIYKSYQ*FNNPTT
Trigger: TGTTGTGGGGTTATTAAACCACTGGTAGCTTTTATA...GATTCTTGTGCTTTGCCTTTGAAAATGCTTAAATGGCCATGACCCTCTTCCTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000645632.1
3UTR CAA 72 bp ACCACCAAAGTTCTCTTGATACCACTGAGGCAATGTTaGATTTCTTACCCATCACTCAGGGAGTTTGAAATA +
Preference number: 4 (lower is better)
Translates to: TTKVLLIPLRQC*ISYPSLREFEI
Trigger: TATTTCAAACTCCCTGAGTGATGGGTAAGAAATCAAACATTGCCTCAGTGGTATCAAGAGAACTTTGGTGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR TCA 90 bp AAGCGTGACTCTCATTTGAATAACTGTAGAGTAAGCAAACCAGAAATTCTCAATAAGGGAAATACCAAATaGCAGCGGTTTGTCCCGATT +
Preference number: 4 (lower is better)
Translates to: KRDSHLNNCRVSKPEILNKGNTK*QRFVPI
Trigger: AATCGGGACAAACCGCTGTCATTTGGTATTTCCCTT...ATTGAGAATTTCTGGTTTGCTTACTCTACAGTTATTCAAATGAGAGTCACGCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR TCA 90 bp TTGTCTAAGCAGATTCTAACTTCAAACTGTCTATTGTTCCAGATGCTACTTTGTGAGGCACATCAGGTTTaGACTTCCTATATGGCAGAT +
Preference number: 4 (lower is better)
Translates to: LSKQILTSNCLLFQMLLCEAHQV*TSYMAD
Trigger: ATCTGCCATATAGGAAGTTCAAACCTGATGTGCCTC...ACAAAGTAGCATCTGGAACAATAGACAGTTTGAAGTTAGAATCTGCTTAGACAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR TCA 90 bp GAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGTTTTGGAAGGTTCAGCTTCTATaGTACACCTCTGAGAAACAG +
Preference number: 4 (lower is better)
Translates to: EYRVLEIISVICFPNRFWKVQLL*YTSEKQ
Trigger: CTGTTTCTCAGAGGTGTATCATAGAAGCTGAACCTT...CCAAAACCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR TCA 90 bp TTGTCTAAGCAGATTCTAACTTCAAACTGTCTATTGTTCCAGATGCTACTTTGTGAATCTGGAATGATTTaGCAGGGGCAGATACTTCAG +
Preference number: 4 (lower is better)
Translates to: LSKQILTSNCLLFQMLLCESGMI*QGQILQ
Trigger: CTGAAGTATCTGCCCCTGTCAAATCATTCCAGATTC...ACAAAGTAGCATCTGGAACAATAGACAGTTTGAAGTTAGAATCTGCTTAGACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR TCA 90 bp TTAGTGTCAGGGATTTTACTGACATATCGATCACTTGTGGATCTGTACCTTTCTGAGGAGTTGCTTTCTTaGCATGAGGTCTTTTATCAT +
Preference number: 4 (lower is better)
Translates to: LVSGILLTYRSLVDLYLSEELLS*HEVFYH
Trigger: ATGATAAAAGACCTCATGTCAAGAAAGCAACTCCTC...AGAAAGGTACAGATCCACAAGTGATCGATATGTCAGTAAAATCCCTGACACTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493341.1
CDS-3UTR TCA 90 bp AGCGAGGGTTTAAGGAGCCTGAGAAGAATTTCACAACTATTGACTATACAGAGTTCACACAACCATCTCTaGCTTTCCTGTACTTTATAT +
Preference number: 4 (lower is better)
Translates to: SEGLRSLRRISQLLTIQSSHNHL*LSCTLY
Trigger: ATATAAAGTACAGGAAAGTCAGAGATGGTTGTGTGA...ACTCTGTATAGTCAATAGTTGTGAAATTCTTCTCAGGCTCCTTAAACCCTCGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR TCA 90 bp CAATGTTCATTTTTATCATCTCGCCTTTGGGTACCAATTCAGTTGTGGGAGCTACAAATATACATTTCTTaGAAGACCGCATCAGTCACA +
Preference number: 4 (lower is better)
Translates to: QCSFLSSRLWVPIQLWELQIYIS*KTASVT
Trigger: TGTGACTGATGCGGTCTTTCAAGAAATGTATATTTG...TAGCTCCCACAACTGAATTGGTACCCAAAGGCGAGATGATAAAAATGAACATTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493341.1
CDS-3UTR TCA 90 bp GAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGTTTTGGAATTTCCCACTTCACTaGTTCCTGTGTAGGTACTTC +
Preference number: 4 (lower is better)
Translates to: EYRVLEIISVICFPNRFWNFPLH*FLCRYF
Trigger: GAAGTACCTACACAGGAATCAGTGAAGTGGGAAATT...CCAAAACCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR TCA 90 bp GAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGTTTTGGTGTCAGGGATTTTACTaGCATATCGATCACTTGTGG +
Preference number: 4 (lower is better)
Translates to: EYRVLEIISVICFPNRFWCQGFY*HIDHLW
Trigger: CCACAAGTGATCGATATGTCAGTAAAATCCCTGACA...CCAAAACCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR TCA 90 bp CCAGAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGTTTATAGGTACTGTTCTATaGCCAATTCCAGCCTCAAGA +
Preference number: 4 (lower is better)
Translates to: PEYRVLEIISVICFPNRFIGTVL*PIPASR
Trigger: TCTTGAGGCTGGAATTGGTCATAGAACAGTACCTAT...AAACCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTCTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR TCA 90 bp GAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGTTTTGGATAGGTACTGTTCTATaGCCAATTCCAGCCTCAAGA +
Preference number: 4 (lower is better)
Translates to: EYRVLEIISVICFPNRFWIGTVL*PIPASR
Trigger: TCTTGAGGCTGGAATTGGTCATAGAACAGTACCTAT...CCAAAACCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR TCA 90 bp CCAGAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGTTTACTTCTAGCTCAAGCTaGCAGTGCAGATTTATTAGG +
Preference number: 4 (lower is better)
Translates to: PEYRVLEIISVICFPNRFTSSSS*QCRFIR
Trigger: CCTAATAAATCTGCACTGTCAGCTTGAGCTAGAAGT...AAACCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTCTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR TCA 90 bp AGCGAGGGTTTAAGGAGCCTGAGAAGAATTTCACAACTATTGACTATACAGAGTCTAAAATCCTCAGTCTaGTCAATTTCTAAGGGTTCA +
Preference number: 4 (lower is better)
Translates to: SEGLRSLRRISQLLTIQSLKSSV*SISKGS
Trigger: TGAACCCTTAGAAATTGATCAGACTGAGGATTTTAG...ACTCTGTATAGTCAATAGTTGTGAAATTCTTCTCAGGCTCCTTAAACCCTCGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR TCA 90 bp GATTTTAGGGTACATAAACTTTATATGAGAGGGACTGTCTGTTGGAAGCATAATGGCTGGTCATTGCATTaGAATGATCATTGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: DFRVHKLYMRGTVCWKHNGWSLH*NDHCPW
Trigger: CCAAGGACAATGATCATTTCAATGCAATGACCAGCC...ATTATGCTTCCAACAGACAGTCCCTCTCATATAAAGTTTATGTACCCTAAAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR TCA 90 bp AGCGAGGGTTTAAGGAGCCTGAGAAGAATTTCACAACTATTGACTATACAGAGTAACAGACAGTGGGACTaGAAAATGATTTCTTATCTG +
Preference number: 4 (lower is better)
Translates to: SEGLRSLRRISQLLTIQSNRQWD*KMISYL
Trigger: CAGATAAGAAATCATTTTTCAGTCCCACTGTCTGTT...ACTCTGTATAGTCAATAGTTGTGAAATTCTTCTCAGGCTCCTTAAACCCTCGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR TCA 90 bp AGCGAGGGTTTAAGGAGCCTGAGAAGAATTTCACAACTATTGACTATACAGAGTCATTTAACAGCTCCATaGCTACCAACAGTATCAATT +
Preference number: 4 (lower is better)
Translates to: SEGLRSLRRISQLLTIQSHLTAP*LPTVSI
Trigger: AATTGATACTGTTGGTAGTCATGGAGCTGTTAAATG...ACTCTGTATAGTCAATAGTTGTGAAATTCTTCTCAGGCTCCTTAAACCCTCGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR TCA 90 bp AGCGAGGGTTTAAGGAGCCTGAGAAGAATTTCACAACTATTGACTATACAGAGTGCTTCGTGTAATTGTTaGCAAGAGAAATTCCAACAT +
Preference number: 4 (lower is better)
Translates to: SEGLRSLRRISQLLTIQSASCNC*QEKFQH
Trigger: ATGTTGGAATTTCTCTTGTCAACAATTACACGAAGC...ACTCTGTATAGTCAATAGTTGTGAAATTCTTCTCAGGCTCCTTAAACCCTCGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR TCA 90 bp GATTTTAGGGTACATAAACTTTATATGAGAGGGACTGTCTGTTGGAAGCATAATCCAAACTCTCTGGCATaGAATACAGACTTCACTCGT +
Preference number: 4 (lower is better)
Translates to: DFRVHKLYMRGTVCWKHNPNSLA*NTDFTR
Trigger: ACGAGTGAAGTCTGTATTTCATGCCAGAGAGTTTGG...ATTATGCTTCCAACAGACAGTCCCTCTCATATAAAGTTTATGTACCCTAAAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR TCA 90 bp AGCGAGGGTTTAAGGAGCCTGAGAAGAATTTCACAACTATTGACTATACAGAGTTACATAAACTTTATATaGGAGGGACTGTCTGTTGGA +
Preference number: 4 (lower is better)
Translates to: SEGLRSLRRISQLLTIQSYINFI*EGLSVG
Trigger: TCCAACAGACAGTCCCTCTCATATAAAGTTTATGTA...ACTCTGTATAGTCAATAGTTGTGAAATTCTTCTCAGGCTCCTTAAACCCTCGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR TCA 90 bp GGACTGTCTGTTGGAAGCATAATACACTATCTAAGATGTTGGGAATTGTGTTTATCAGCCACACTAAACTaGCCTTGGGATTTTTGTGAA +
Preference number: 4 (lower is better)
Translates to: GLSVGSIIHYLRCWELCLSATLN*PWDFCE
Trigger: TTCACAAAAATCCCAAGGTCAGTTTAGTGTGGCTGA...TAAACACAATTCCCAACATCTTAGATAGTGTATTATGCTTCCAACAGACAGTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS-3UTR TCA 90 bp TGTAATATGCTTCCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTTTAGAAACCAAGAGTaGTTCCATCTTCTCACTCAA +
Preference number: 4 (lower is better)
Translates to: CNMLPKQVLEGSLGAVITFRNQE*FHLLTQ
Trigger: TTGAGTGAGAAGATGGAATCACTCTTGGTTTCTAAA...AGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGGAAGCATATTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS-3UTR TCA 90 bp GATTTTAGGGTACATAAACTTTATATGAGAGGGACTGTCTGTTGGAAGCATAATTTGCCACCTGTATGGTaGATCAGCCAAAAGGTAGAT +
Preference number: 4 (lower is better)
Translates to: DFRVHKLYMRGTVCWKHNLPPVW*ISQKVD
Trigger: ATCTACCTTTTGGCTGATTCACCATACAGGTGGCAA...ATTATGCTTCCAACAGACAGTCCCTCTCATATAAAGTTTATGTACCCTAAAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS-3UTR GCA 90 bp CAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATTGCTGTGTGTCTTCAAGTTTCAAATTTTATTaGTTGTGCTCCTGGTCTTTG +
Preference number: 4 (lower is better)
Translates to: QVLEGSLGAVITYCCVSSSFKFY*LCSWSL
Trigger: CAAAGACCAGGAGCACAAGCAATAAAATTTGAAACT...TGAAGACACACAGCAATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR GCA 90 bp GAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGTTTTGGTGCAGAACCAGCAGTTaGATCCATGTAAGAAACCAT +
Preference number: 4 (lower is better)
Translates to: EYRVLEIISVICFPNRFWCRTSS*IHVRNH
Trigger: ATGGTTTCTTACATGGATGCAACTGCTGGTTCTGCA...CCAAAACCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR GCA 90 bp AATATGCTTCCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATACATTTGCAACAGTCTaGAGAAATTCTACGCTTGCA +
Preference number: 4 (lower is better)
Translates to: NMLPKQVLEGSLGAVITYTFATV*RNSTLA
Trigger: TGCAAGCGTAGAATTTCTGCAGACTGTTGCAAATGT...ATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGGAAGCATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR GCA 90 bp GGACTGTCTGTTGGAAGCATAATACACTATCTAAGATGTTGGGAATTGTGTTTATTAGCAGTCCATGTTTaGACACTGGTTTCTACAGCA +
Preference number: 4 (lower is better)
Translates to: GLSVGSIIHYLRCWELCLLAVHV*TLVSTA
Trigger: TGCTGTAGAAACCAGTGTGCAAACATGGACTGCTAA...TAAACACAATTCCCAACATCTTAGATAGTGTATTATGCTTCCAACAGACAGTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR GCA 90 bp TTAGTGTCAGGGATTTTACTGACATATCGATCACTTGTGGATCTGTACCTTTCTAACAAGTCACAGGGCTaGAAAACAGTAGTGATTTTG +
Preference number: 4 (lower is better)
Translates to: LVSGILLTYRSLVDLYLSNKSQG*KTVVIL
Trigger: CAAAATCACTACTGTTTTGCAGCCCTGTGACTTGTT...AGAAAGGTACAGATCCACAAGTGATCGATATGTCAGTAAAATCCCTGACACTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000493341.1
CDS-3UTR GCA 90 bp AAACTTTATATGAGAGGGACTGTCTGTTGGAAGCATAATACACTATCTAAGATGCAAAAGGGGATACACTaGTCCAAATCAAGAGAGAGC +
Preference number: 4 (lower is better)
Translates to: KLYMRGTVCWKHNTLSKMQKGIH*SKSRES
Trigger: GCTCTCTCTTGATTTGGAGCAGTGTATCCCCTTTTG...CATCTTAGATAGTGTATTATGCTTCCAACAGACAGTCCCTCTCATATAAAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR GCA 90 bp TTGTCTAAGCAGATTCTAACTTCAAACTGTCTATTGTTCCAGATGCTACTTTGTCAAAAGGGGATACACTaGTCCAAATCAAGAGAGAGC +
Preference number: 4 (lower is better)
Translates to: LSKQILTSNCLLFQMLLCQKGIH*SKSRES
Trigger: GCTCTCTCTTGATTTGGAGCAGTGTATCCCCTTTTG...ACAAAGTAGCATCTGGAACAATAGACAGTTTGAAGTTAGAATCTGCTTAGACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR GCA 90 bp ATGCTTCCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATTGCATGAGTACATACATCTaGTTAATGGCCTGTTTTGAA +
Preference number: 4 (lower is better)
Translates to: MLPKQVLEGSLGAVITYCMSTYI*LMACFE
Trigger: TTCAAAACAGGCCATTAAGCAGATGTATGTACTCAT...GCAATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGGAAGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR GCA 90 bp GGACTGTCTGTTGGAAGCATAATACACTATCTAAGATGTTGGGAATTGTGTTTAGTTCCTTTGCTTCAATaGGCAATCTTCTCCCATGAA +
Preference number: 4 (lower is better)
Translates to: GLSVGSIIHYLRCWELCLVPLLQ*AIFSHE
Trigger: TTCATGGGAGAAGATTGCGCATTGAAGCAAAGGAAC...TAAACACAATTCCCAACATCTTAGATAGTGTATTATGCTTCCAACAGACAGTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR GCA 90 bp ATGCTTCCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATTGCGCTCAGAGAGTATTTTaGAAATGTGAAGAAATCACA +
Preference number: 4 (lower is better)
Translates to: MLPKQVLEGSLGAVITYCAQRVF*KCEEIT
Trigger: TGTGATTTCTTCACATTTGCAAAATACTCTCTGAGC...GCAATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGGAAGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS-3UTR CCA 90 bp GGACTGTCTGTTGGAAGCATAATACACTATCTAAGATGTTGGGAATTGTGTTTACTAGTGGCACTGTATTaGTCTTTTGTTACAGCAGGT +
Preference number: 4 (lower is better)
Translates to: GLSVGSIIHYLRCWELCLLVALY*SFVTAG
Trigger: ACCTGCTGTAACAAAAGACCAATACAGTGCCACTAG...TAAACACAATTCCCAACATCTTAGATAGTGTATTATGCTTCCAACAGACAGTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CCA 90 bp GAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGTTTTGGAGAAGCCGTTTCTTCTaGGATGGTTTCCTTAGTTGT +
Preference number: 4 (lower is better)
Translates to: EYRVLEIISVICFPNRFWRSRFF*DGFLSC
Trigger: ACAACTAAGGAAACCATCCCAGAAGAAACGGCTTCT...CCAAAACCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CCA 90 bp GAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGTTTTGGTGTGCAGTACAAATCTaGGCTGAATGTCCTTCACTT +
Preference number: 4 (lower is better)
Translates to: EYRVLEIISVICFPNRFWCAVQI*AECPSL
Trigger: AAGTGAAGGACATTCAGCCCAGATTTGTACTGCACA...CCAAAACCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CCA 90 bp GAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGTTTTGGGTGCTTTACACTCATTaGCTTCCATCTTGCCTTCTT +
Preference number: 4 (lower is better)
Translates to: EYRVLEIISVICFPNRFWVLYTH*LPSCLL
Trigger: AAGAAGGCAAGATGGAAGCCAATGAGTGTAAAGCAC...CCAAAACCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CCA 90 bp CAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATTGCTGTGTGTCTTCATTGAGCTCCTTTGATTaGTTTTGTAACAATTCCTGT +
Preference number: 4 (lower is better)
Translates to: QVLEGSLGAVITYCCVSSLSSFD*FCNNSC
Trigger: ACAGGAATTGTTACAAAACCAATCAAAGGAGCTCAA...TGAAGACACACAGCAATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CCA 90 bp AGCGAGGGTTTAAGGAGCCTGAGAAGAATTTCACAACTATTGACTATACAGAGTCAGTTAATAGTAACTTaGTGGCACATACAACATGCA +
Preference number: 4 (lower is better)
Translates to: SEGLRSLRRISQLLTIQSQLIVT*WHIQHA
Trigger: TGCATGTTGTATGTGCCACCAAGTTACTATTAACTG...ACTCTGTATAGTCAATAGTTGTGAAATTCTTCTCAGGCTCCTTAAACCCTCGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CCA 90 bp AAACTTTATATGAGAGGGACTGTCTGTTGGAAGCATAATACACTATCTAAGATGATAGTTGCCTCCAAATaGACTAGGATTGTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: KLYMRGTVCWKHNTLSKMIVASK*TRIVEE
Trigger: CTCCTCCACAATCCTAGTCCATTTGGAGGCAACTAT...CATCTTAGATAGTGTATTATGCTTCCAACAGACAGTCCCTCTCATATAAAGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS-3UTR CCA 90 bp GATTTTAGGGTACATAAACTTTATATGAGAGGGACTGTCTGTTGGAAGCATAATAGACTTCCTGAGTTGTaGATCTGCTGCTCCTTATCT +
Preference number: 4 (lower is better)
Translates to: DFRVHKLYMRGTVCWKHNRLPEL*ICCSLS
Trigger: AGATAAGGAGCAGCAGATCCACAACTCAGGAAGTCT...ATTATGCTTCCAACAGACAGTCCCTCTCATATAAAGTTTATGTACCCTAAAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360280.8
3UTR CAA 72 bp AACTGTAGAGTAAGCAAACCAGAAATTCTCAATCTATaGGCAACGGGACAGGTTATTGGGTTAGATTTTAGG +
Preference number: 4 (lower is better)
Translates to: NCRVSKPEILNL*ATGQVIGLDFR
Trigger: CCTAAAATCTAACCCAATAACCTGTCCCGTTGCCAATAGATTGAGAATTTCTGGTTTGCTTACTCTACAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
3UTR CAA 72 bp CCTGGACTATACAGCACCATGGTGAGATCATCAGTTTaGAAGCTTATGTTTAGTGTTGTCTTAACTAGTAAG +
Preference number: 4 (lower is better)
Translates to: PGLYSTMVRSSV*KLMFSVVLTSK
Trigger: CTTACTAGTTAAGACAACACTAAACATAAGCTTCAAAACTGATGATCTCACCATGGTGCTGTATAGTCCAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493341.1
3UTR CAA 72 bp GAAAGACATTTGCAACAGTCTGCAGAAATTCTACGCTaGCACAAATATACATTTCTTGAAAGACCGCATCAG +
Preference number: 4 (lower is better)
Translates to: ERHLQQSAEILR*HKYTFLERPHQ
Trigger: CTGATGCGGTCTTTCAAGAAATGTATATTTGTGCAAGCGTAGAATTTCTGCAGACTGTTGCAAATGTCTTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493341.1
CDS-3UTR TCA 90 bp AAGCGTGACTCTCATTTGAATAACTGTAGAGTAAGCAAACCAGAAATTCTCAATAAGGTTCAGCTTCTATaGTACACCTCTGAGAAACAG +
Preference number: 4 (lower is better)
Translates to: KRDSHLNNCRVSKPEILNKVQLL*YTSEKQ
Trigger: CTGTTTCTCAGAGGTGTATCATAGAAGCTGAACCTT...ATTGAGAATTTCTGGTTTGCTTACTCTACAGTTATTCAAATGAGAGTCACGCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR TCA 90 bp TTGTCTAAGCAGATTCTAACTTCAAACTGTCTATTGTTCCAGATGCTACTTTGTAAGGTTCAGCTTCTATaGTACACCTCTGAGAAACAG +
Preference number: 4 (lower is better)
Translates to: LSKQILTSNCLLFQMLLCKVQLL*YTSEKQ
Trigger: CTGTTTCTCAGAGGTGTATCATAGAAGCTGAACCTT...ACAAAGTAGCATCTGGAACAATAGACAGTTTGAAGTTAGAATCTGCTTAGACAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR TCA 90 bp GATTTTAGGGTACATAAACTTTATATGAGAGGGACTGTCTGTTGGAAGCATAATTTTTGTTACAGCAGGTaGGGCACTACCATCTTTTTC +
Preference number: 4 (lower is better)
Translates to: DFRVHKLYMRGTVCWKHNFCYSR*GTTIFF
Trigger: GAAAAAGATGGTAGTGCCTCACCTGCTGTAACAAAA...ATTATGCTTCCAACAGACAGTCCCTCTCATATAAAGTTTATGTACCCTAAAATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR TCA 90 bp GATTTTAGGGTACATAAACTTTATATGAGAGGGACTGTCTGTTGGAAGCATAATAATTTCCCACTTCACTaGTTCCTGTGTAGGTACTTC +
Preference number: 4 (lower is better)
Translates to: DFRVHKLYMRGTVCWKHNNFPLH*FLCRYF
Trigger: GAAGTACCTACACAGGAATCAGTGAAGTGGGAAATT...ATTATGCTTCCAACAGACAGTCCCTCTCATATAAAGTTTATGTACCCTAAAATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR TCA 90 bp AAGCGTGACTCTCATTTGAATAACTGTAGAGTAAGCAAACCAGAAATTCTCAATTGTCAGGGATTTTACTaGCATATCGATCACTTGTGG +
Preference number: 4 (lower is better)
Translates to: KRDSHLNNCRVSKPEILNCQGFY*HIDHLW
Trigger: CCACAAGTGATCGATATGTCAGTAAAATCCCTGACA...ATTGAGAATTTCTGGTTTGCTTACTCTACAGTTATTCAAATGAGAGTCACGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR TCA 90 bp TTGTCTAAGCAGATTCTAACTTCAAACTGTCTATTGTTCCAGATGCTACTTTGTATAGGTACTGTTCTATaGCCAATTCCAGCCTCAAGA +
Preference number: 4 (lower is better)
Translates to: LSKQILTSNCLLFQMLLCIGTVL*PIPASR
Trigger: TCTTGAGGCTGGAATTGGTCATAGAACAGTACCTAT...ACAAAGTAGCATCTGGAACAATAGACAGTTTGAAGTTAGAATCTGCTTAGACAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR TCA 90 bp TTGTCTAAGCAGATTCTAACTTCAAACTGTCTATTGTTCCAGATGCTACTTTGTACTTCTAGCTCAAGCTaGCAGTGCAGATTTATTAGG +
Preference number: 4 (lower is better)
Translates to: LSKQILTSNCLLFQMLLCTSSSS*QCRFIR
Trigger: CCTAATAAATCTGCACTGTCAGCTTGAGCTAGAAGT...ACAAAGTAGCATCTGGAACAATAGACAGTTTGAAGTTAGAATCTGCTTAGACAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR TCA 90 bp GATTTTAGGGTACATAAACTTTATATGAGAGGGACTGTCTGTTGGAAGCATAATAGTGGGACTGAAAAATaGTTTCTTATCTGCACTGGG +
Preference number: 4 (lower is better)
Translates to: DFRVHKLYMRGTVCWKHNSGTEK*FLICTG
Trigger: CCCAGTGCAGATAAGAAATCATTTTTCAGTCCCACT...ATTATGCTTCCAACAGACAGTCCCTCTCATATAAAGTTTATGTACCCTAAAATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR TCA 90 bp TTGTCTAAGCAGATTCTAACTTCAAACTGTCTATTGTTCCAGATGCTACTTTGTAGTGGGACTGAAAAATaGTTTCTTATCTGCACTGGG +
Preference number: 4 (lower is better)
Translates to: LSKQILTSNCLLFQMLLCSGTEK*FLICTG
Trigger: CCCAGTGCAGATAAGAAATCATTTTTCAGTCCCACT...ACAAAGTAGCATCTGGAACAATAGACAGTTTGAAGTTAGAATCTGCTTAGACAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR TCA 90 bp CATCCAGAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGCATTTAACAGCTCCATaGCTACCAACAGTATCAATT +
Preference number: 4 (lower is better)
Translates to: HPEYRVLEIISVICFPNRHLTAP*LPTVSI
Trigger: AATTGATACTGTTGGTAGTCATGGAGCTGTTAAATG...CCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTCTGGATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR TCA 90 bp AATATGCTTCCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATTCCTTCTTCAGCCACTaGTATATGGTATTTGCTTTT +
Preference number: 4 (lower is better)
Translates to: NMLPKQVLEGSLGAVITYSFFSH*YMVFAF
Trigger: AAAAGCAAATACCATATATCAGTGGCTGAAGAAGGA...ATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGGAAGCATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR TCA 90 bp GATTTTAGGGTACATAAACTTTATATGAGAGGGACTGTCTGTTGGAAGCATAATAGGCTGACTTGTGATTaGTCTACTAATGAGGCTGTT +
Preference number: 4 (lower is better)
Translates to: DFRVHKLYMRGTVCWKHNRLTCD*STNEAV
Trigger: AACAGCCTCATTAGTAGATCAATCACAAGTCAGCCT...ATTATGCTTCCAACAGACAGTCCCTCTCATATAAAGTTTATGTACCCTAAAATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR TCA 90 bp TTGTCTAAGCAGATTCTAACTTCAAACTGTCTATTGTTCCAGATGCTACTTTGTAGGCTGACTTGTGATTaGTCTACTAATGAGGCTGTT +
Preference number: 4 (lower is better)
Translates to: LSKQILTSNCLLFQMLLCRLTCD*STNEAV
Trigger: AACAGCCTCATTAGTAGATCAATCACAAGTCAGCCT...ACAAAGTAGCATCTGGAACAATAGACAGTTTGAAGTTAGAATCTGCTTAGACAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR TCA 90 bp CCAGAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGTTTTTGAATAGTGTCTTATaGCTTCAGACTGTAGATCGG +
Preference number: 4 (lower is better)
Translates to: PEYRVLEIISVICFPNRFLNSVL*LQTVDR
Trigger: CCGATCTACAGTCTGAAGTCATAAGACACTATTCAA...AAACCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTCTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR TCA 90 bp CCAGAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGTTTATCACAAGCTGCTTTTaGTCACAAGTACCAGAAATC +
Preference number: 4 (lower is better)
Translates to: PEYRVLEIISVICFPNRFITSCF*SQVPEI
Trigger: GATTTCTGGTACTTGTGATCAAAAGCAGCTTGTGAT...AAACCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTCTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS-3UTR TCA 90 bp GAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGTTTTGGACCTTGGGATTTTTGTaGACACTAAAGGAAAAGCAG +
Preference number: 4 (lower is better)
Translates to: EYRVLEIISVICFPNRFWTLGFL*TLKEKQ
Trigger: CTGCTTTTCCTTTAGTGTTCACAAAAATCCCAAGGT...CCAAAACCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS-3UTR TCA 90 bp TTGTCTAAGCAGATTCTAACTTCAAACTGTCTATTGTTCCAGATGCTACTTTGTAGTAAGTACCACCAATaGCGAGGATACATAAGGTAC +
Preference number: 4 (lower is better)
Translates to: LSKQILTSNCLLFQMLLCSKYHQ*RGYIRY
Trigger: GTACCTTATGTATCCTCGTCATTGGTGGTACTTACT...ACAAAGTAGCATCTGGAACAATAGACAGTTTGAAGTTAGAATCTGCTTAGACAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR GCA 90 bp TTGTCTAAGCAGATTCTAACTTCAAACTGTCTATTGTTCCAGATGCTACTTTGTCAGTTCCTGTTGCTTTaGTTCCATGAGTTGTTTCTC +
Preference number: 4 (lower is better)
Translates to: LSKQILTSNCLLFQMLLCQFLLL*FHELFL
Trigger: GAGAAACAACTCATGGAAGCAAAGCAACAGGAACTG...ACAAAGTAGCATCTGGAACAATAGACAGTTTGAAGTTAGAATCTGCTTAGACAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR GCA 90 bp GAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGTTTTGGGATCAGTTGTCTGCATaGTCAGATTTTGAAGGGAAA +
Preference number: 4 (lower is better)
Translates to: EYRVLEIISVICFPNRFWDQLSA*SDFEGK
Trigger: TTTCCCTTCAAAATCTGAGCATGCAGACAACTGATC...CCAAAACCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR GCA 90 bp AAACTTTATATGAGAGGGACTGTCTGTTGGAAGCATAATACACTATCTAAGATGCTTTACCTCAACTTCTaGCGTCTGTCTAGCTATAGT +
Preference number: 4 (lower is better)
Translates to: KLYMRGTVCWKHNTLSKMLYLNF*RLSSYS
Trigger: ACTATAGCTAGACAGACGGCAGAAGTTGAGGTAAAG...CATCTTAGATAGTGTATTATGCTTCCAACAGACAGTCCCTCTCATATAAAGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR GCA 90 bp AAGCGTGACTCTCATTTGAATAACTGTAGAGTAAGCAAACCAGAAATTCTCAATCTTTACCTCAACTTCTaGCGTCTGTCTAGCTATAGT +
Preference number: 4 (lower is better)
Translates to: KRDSHLNNCRVSKPEILNLYLNF*RLSSYS
Trigger: ACTATAGCTAGACAGACGGCAGAAGTTGAGGTAAAG...ATTGAGAATTTCTGGTTTGCTTACTCTACAGTTATTCAAATGAGAGTCACGCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR GCA 90 bp AAACTTTATATGAGAGGGACTGTCTGTTGGAAGCATAATACACTATCTAAGATGTGCAGAACCAGCAGTTaGATCCATGTAAGAAACCAT +
Preference number: 4 (lower is better)
Translates to: KLYMRGTVCWKHNTLSKMCRTSS*IHVRNH
Trigger: ATGGTTTCTTACATGGATGCAACTGCTGGTTCTGCA...CATCTTAGATAGTGTATTATGCTTCCAACAGACAGTCCCTCTCATATAAAGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR GCA 90 bp AAGCGTGACTCTCATTTGAATAACTGTAGAGTAAGCAAACCAGAAATTCTCAATTTAGCAGTCCATGTTTaGACACTGGTTTCTACAGCA +
Preference number: 4 (lower is better)
Translates to: KRDSHLNNCRVSKPEILNLAVHV*TLVSTA
Trigger: TGCTGTAGAAACCAGTGTGCAAACATGGACTGCTAA...ATTGAGAATTTCTGGTTTGCTTACTCTACAGTTATTCAAATGAGAGTCACGCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR GCA 90 bp TTGTCTAAGCAGATTCTAACTTCAAACTGTCTATTGTTCCAGATGCTACTTTGTTTAGCAGTCCATGTTTaGACACTGGTTTCTACAGCA +
Preference number: 4 (lower is better)
Translates to: LSKQILTSNCLLFQMLLCLAVHV*TLVSTA
Trigger: TGCTGTAGAAACCAGTGTGCAAACATGGACTGCTAA...ACAAAGTAGCATCTGGAACAATAGACAGTTTGAAGTTAGAATCTGCTTAGACAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR GCA 90 bp CCAGAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGTTTATAAGGACTATGAAATaGCACAACTGTCTGACCAGT +
Preference number: 4 (lower is better)
Translates to: PEYRVLEIISVICFPNRFIRTMK*HNCLTS
Trigger: ACTGGTCAGACAGTTGTGGCATTTCATAGTCCTTAT...AAACCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTCTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR GCA 90 bp AAGCGTGACTCTCATTTGAATAACTGTAGAGTAAGCAAACCAGAAATTCTCAATGGCCAAATTCACTTCTaGTATAATACCTCCAAGCTC +
Preference number: 4 (lower is better)
Translates to: KRDSHLNNCRVSKPEILNGQIHF*YNTSKL
Trigger: GAGCTTGGAGGTATTATAGCAGAAGTGAATTTGGCC...ATTGAGAATTTCTGGTTTGCTTACTCTACAGTTATTCAAATGAGAGTCACGCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR GCA 90 bp AAACTTTATATGAGAGGGACTGTCTGTTGGAAGCATAATACACTATCTAAGATGGGCCAAATTCACTTCTaGTATAATACCTCCAAGCTC +
Preference number: 4 (lower is better)
Translates to: KLYMRGTVCWKHNTLSKMGQIHF*YNTSKL
Trigger: GAGCTTGGAGGTATTATAGCAGAAGTGAATTTGGCC...CATCTTAGATAGTGTATTATGCTTCCAACAGACAGTCCCTCTCATATAAAGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR GCA 90 bp TTGTCTAAGCAGATTCTAACTTCAAACTGTCTATTGTTCCAGATGCTACTTTGTGGCCAAATTCACTTCTaGTATAATACCTCCAAGCTC +
Preference number: 4 (lower is better)
Translates to: LSKQILTSNCLLFQMLLCGQIHF*YNTSKL
Trigger: GAGCTTGGAGGTATTATAGCAGAAGTGAATTTGGCC...ACAAAGTAGCATCTGGAACAATAGACAGTTTGAAGTTAGAATCTGCTTAGACAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR GCA 90 bp GGACTGTCTGTTGGAAGCATAATACACTATCTAAGATGTTGGGAATTGTGTTTATCTAACTTCTCAGTGTaGTTTACACTCATTGGCTTC +
Preference number: 4 (lower is better)
Translates to: GLSVGSIIHYLRCWELCLSNFSV*FTLIGF
Trigger: GAAGCCAATGAGTGTAAAGCACACTGAGAAGTTAGA...TAAACACAATTCCCAACATCTTAGATAGTGTATTATGCTTCCAACAGACAGTCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR GCA 90 bp CCAGAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGTTTTATCTGGGAATGTCCTaGAGATCTCATGACAATACT +
Preference number: 4 (lower is better)
Translates to: PEYRVLEIISVICFPNRFYLGMS*RSHDNT
Trigger: AGTATTGTCATGAGATCTGCAGGACATTCCCAGATA...AAACCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTCTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR GCA 90 bp TTGTCTAAGCAGATTCTAACTTCAAACTGTCTATTGTTCCAGATGCTACTTTGTTTTAAAGAAACCAGCTaGTCCTCCTTTTTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: LSKQILTSNCLLFQMLLCFKETS*SSFLSS
Trigger: GGAGCTCAAAAAGGAGGAGCAGCTGGTTTCTTTAAA...ACAAAGTAGCATCTGGAACAATAGACAGTTTGAAGTTAGAATCTGCTTAGACAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR GCA 90 bp CCAGAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGTTTTCATCAAAACTATACTaGCACTCACACGTGAGTTGT +
Preference number: 4 (lower is better)
Translates to: PEYRVLEIISVICFPNRFSSKLY*HSHVSC
Trigger: ACAACTCACGTGTGAGTGGCAGTATAGTTTTGATGA...AAACCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTCTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR GCA 90 bp GATTTTAGGGTACATAAACTTTATATGAGAGGGACTGTCTGTTGGAAGCATAATGTTCCTTTGCTTCAATaGGCAATCTTCTCCCATGAA +
Preference number: 4 (lower is better)
Translates to: DFRVHKLYMRGTVCWKHNVPLLQ*AIFSHE
Trigger: TTCATGGGAGAAGATTGCGCATTGAAGCAAAGGAAC...ATTATGCTTCCAACAGACAGTCCCTCTCATATAAAGTTTATGTACCCTAAAATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR GCA 90 bp AAGCGTGACTCTCATTTGAATAACTGTAGAGTAAGCAAACCAGAAATTCTCAATTCAATGTGCTGGCCTTaGTTTTTGGATAGTCCTGAA +
Preference number: 4 (lower is better)
Translates to: KRDSHLNNCRVSKPEILNSMCWP*FLDSPE
Trigger: TTCAGGACTATCCAAAAAGCAAGGCCAGCACATTGA...ATTGAGAATTTCTGGTTTGCTTACTCTACAGTTATTCAAATGAGAGTCACGCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS-3UTR CCA 90 bp TGTAATATGCTTCCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTTTGAACTTCCTATATaGCAGATTTTGTGCCATCAT +
Preference number: 4 (lower is better)
Translates to: CNMLPKQVLEGSLGAVITFELPI*QILCHH
Trigger: ATGATGGCACAAAATCTGCCATATAGGAAGTTCAAA...AGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGGAAGCATATTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CCA 90 bp AGCGAGGGTTTAAGGAGCCTGAGAAGAATTTCACAACTATTGACTATACAGAGTTTCAGGTTGAACATCTaGTTGCTGTTCATTAGTATT +
Preference number: 4 (lower is better)
Translates to: SEGLRSLRRISQLLTIQSFRLNI*LLFISI
Trigger: AATACTAATGAACAGCAACCAGATGTTCAACCTGAA...ACTCTGTATAGTCAATAGTTGTGAAATTCTTCTCAGGCTCCTTAAACCCTCGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CCA 90 bp ACTTGGAGATCTTTAATGGCAGCAGTCATTGTACTATTTTCAAGGTTACCTTTACTAGTGGCACTGTATTaGTCTTTTGTTACAGCAGGT +
Preference number: 4 (lower is better)
Translates to: TWRSLMAAVIVLFSRLPLLVALY*SFVTAG
Trigger: ACCTGCTGTAACAAAAGACCAATACAGTGCCACTAG...TAAAGGTAACCTTGAAAATAGTACAATGACTGCTGCCATTAAAGATCTCCAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493341.1
CDS-3UTR CCA 90 bp AAACTTTATATGAGAGGGACTGTCTGTTGGAAGCATAATACACTATCTAAGATGGTTGCTCCTCCTGAATaGTGTGAAGCATTAGTAGTA +
Preference number: 4 (lower is better)
Translates to: KLYMRGTVCWKHNTLSKMVAPPE*CEALVV
Trigger: TACTACTAATGCTTCACACCATTCAGGAGGAGCAAC...CATCTTAGATAGTGTATTATGCTTCCAACAGACAGTCCCTCTCATATAAAGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CCA 90 bp AAACTTTATATGAGAGGGACTGTCTGTTGGAAGCATAATACACTATCTAAGATGAGAAGCCGTTTCTTCTaGGATGGTTTCCTTAGTTGT +
Preference number: 4 (lower is better)
Translates to: KLYMRGTVCWKHNTLSKMRSRFF*DGFLSC
Trigger: ACAACTAAGGAAACCATCCCAGAAGAAACGGCTTCT...CATCTTAGATAGTGTATTATGCTTCCAACAGACAGTCCCTCTCATATAAAGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CCA 90 bp CCAGAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGTTTGATACCAAGATTCCATaGTCTAAAATCCTCAGTCTG +
Preference number: 4 (lower is better)
Translates to: PEYRVLEIISVICFPNRFDTKIP*SKILSL
Trigger: CAGACTGAGGATTTTAGACCATGGAATCTTGGTATC...AAACCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTCTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CCA 90 bp GAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGTTTTGGTGTGTTACTTCACCATaGCTTTTTCTACATCTCCAC +
Preference number: 4 (lower is better)
Translates to: EYRVLEIISVICFPNRFWCVTSP*LFLHLH
Trigger: GTGGAGATGTAGAAAAAGCCATGGTGAAGTAACACA...CCAAAACCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CCA 90 bp TTGTCTAAGCAGATTCTAACTTCAAACTGTCTATTGTTCCAGATGCTACTTTGTGTGCTTTACACTCATTaGCTTCCATCTTGCCTTCTT +
Preference number: 4 (lower is better)
Translates to: LSKQILTSNCLLFQMLLCVLYTH*LPSCLL
Trigger: AAGAAGGCAAGATGGAAGCCAATGAGTGTAAAGCAC...ACAAAGTAGCATCTGGAACAATAGACAGTTTGAAGTTAGAATCTGCTTAGACAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR CCA 90 bp GAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGTTTTGGCATGGTGACCGACTTTaGAGGTTTAACAGGATAAAA +
Preference number: 4 (lower is better)
Translates to: EYRVLEIISVICFPNRFWHGDRL*RFNRIK
Trigger: TTTTATCCTGTTAAACCTCCAAAGTCGGTCACCATG...CCAAAACCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CCA 90 bp AGCGAGGGTTTAAGGAGCCTGAGAAGAATTTCACAACTATTGACTATACAGAGTTTAATAGTAACTTGGTaGCACATACAACATGCATTG +
Preference number: 4 (lower is better)
Translates to: SEGLRSLRRISQLLTIQSLIVTW*HIQHAL
Trigger: CAATGCATGTTGTATGTGCCACCAAGTTACTATTAA...ACTCTGTATAGTCAATAGTTGTGAAATTCTTCTCAGGCTCCTTAAACCCTCGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CCA 90 bp AATATGCTTCCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATCAGTTAATAGTAACTTaGTGGCACATACAACATGCA +
Preference number: 4 (lower is better)
Translates to: NMLPKQVLEGSLGAVITYQLIVT*WHIQHA
Trigger: TGCATGTTGTATGTGCCACCAAGTTACTATTAACTG...ATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGGAAGCATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CCA 90 bp GGACTGTCTGTTGGAAGCATAATACACTATCTAAGATGTTGGGAATTGTGTTTAACTGTATGTGCCTTTTaGCTCAGAGAGTATTTTGCA +
Preference number: 4 (lower is better)
Translates to: GLSVGSIIHYLRCWELCLTVCAF*LREYFA
Trigger: TGCAAAATACTCTCTGAGCCAAAAGGCACATACAGT...TAAACACAATTCCCAACATCTTAGATAGTGTATTATGCTTCCAACAGACAGTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS-3UTR TCA 90 bp TTGTCTAAGCAGATTCTAACTTCAAACTGTCTATTGTTCCAGATGCTACTTTGTAATGGTACATCCAGTTaGCTCAGGGCATTTTCTTTA +
Preference number: 4 (lower is better)
Translates to: LSKQILTSNCLLFQMLLCNGTSS*LRAFSL
Trigger: TAAAGAAAATGCCCTGAGTCAACTGGATGTACCATT...ACAAAGTAGCATCTGGAACAATAGACAGTTTGAAGTTAGAATCTGCTTAGACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR TCA 90 bp AAACTTTATATGAGAGGGACTGTCTGTTGGAAGCATAATACACTATCTAAGATGCCTCTTTTGGAGGTCTaGAGAATTCCACTATACTAT +
Preference number: 4 (lower is better)
Translates to: KLYMRGTVCWKHNTLSKMPLLEV*RIPLYY
Trigger: ATAGTATAGTGGAATTCTTCAGACCTCCAAAAGAGG...CATCTTAGATAGTGTATTATGCTTCCAACAGACAGTCCCTCTCATATAAAGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR TCA 90 bp TTGTCTAAGCAGATTCTAACTTCAAACTGTCTATTGTTCCAGATGCTACTTTGTCCTCTTTTGGAGGTCTaGAGAATTCCACTATACTAT +
Preference number: 4 (lower is better)
Translates to: LSKQILTSNCLLFQMLLCPLLEV*RIPLYY
Trigger: ATAGTATAGTGGAATTCTTCAGACCTCCAAAAGAGG...ACAAAGTAGCATCTGGAACAATAGACAGTTTGAAGTTAGAATCTGCTTAGACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR TCA 90 bp CCAGAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGTTTTCACACAACCATCTCTaGCTTTCCTGTACTTTATAT +
Preference number: 4 (lower is better)
Translates to: PEYRVLEIISVICFPNRFSHNHL*LSCTLY
Trigger: ATATAAAGTACAGGAAAGTCAGAGATGGTTGTGTGA...AAACCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTCTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR TCA 90 bp GGACTGTCTGTTGGAAGCATAATACACTATCTAAGATGTTGGGAATTGTGTTTAAACAGACAGTGGGACTaGAAAATGATTTCTTATCTG +
Preference number: 4 (lower is better)
Translates to: GLSVGSIIHYLRCWELCLNRQWD*KMISYL
Trigger: CAGATAAGAAATCATTTTTCAGTCCCACTGTCTGTT...TAAACACAATTCCCAACATCTTAGATAGTGTATTATGCTTCCAACAGACAGTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR TCA 90 bp GAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGTTTTGGATCCTAATGGTATGTTaGATTCATTTTCAGGTGAGG +
Preference number: 4 (lower is better)
Translates to: EYRVLEIISVICFPNRFWILMVC*IHFQVR
Trigger: CCTCACCTGAAAATGAATTCAACATACCATTAGGAT...CCAAAACCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR TCA 90 bp CCAGAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGTTTACCAACAGTATCAATTaGAAACTGATTGGACAACTC +
Preference number: 4 (lower is better)
Translates to: PEYRVLEIISVICFPNRFTNSIN*KLIGQL
Trigger: GAGTTGTCCAATCAGTTTTCAATTGATACTGTTGGT...AAACCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTCTGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR TCA 90 bp GAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGTTTTGGTCCTTCTTCAGCCACTaGTATATGGTATTTGCTTTT +
Preference number: 4 (lower is better)
Translates to: EYRVLEIISVICFPNRFWSFFSH*YMVFAF
Trigger: AAAAGCAAATACCATATATCAGTGGCTGAAGAAGGA...CCAAAACCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR TCA 90 bp TTGTCTAAGCAGATTCTAACTTCAAACTGTCTATTGTTCCAGATGCTACTTTGTACAGCACCATGTATCTaGTTTTGGATCTGTATTCTG +
Preference number: 4 (lower is better)
Translates to: LSKQILTSNCLLFQMLLCTAPCI*FWICIL
Trigger: CAGAATACAGATCCAAAATCAGATACATGGTGCTGT...ACAAAGTAGCATCTGGAACAATAGACAGTTTGAAGTTAGAATCTGCTTAGACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR TCA 90 bp GATTTTAGGGTACATAAACTTTATATGAGAGGGACTGTCTGTTGGAAGCATAATACCCAAGATCTAACCTaGGATCCATTTCTTGAATCA +
Preference number: 4 (lower is better)
Translates to: DFRVHKLYMRGTVCWKHNTQDLT*DPFLES
Trigger: TGATTCAAGAAATGGATCTCAGGTTAGATCTTGGGT...ATTATGCTTCCAACAGACAGTCCCTCTCATATAAAGTTTATGTACCCTAAAATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR TCA 90 bp TTGTCTAAGCAGATTCTAACTTCAAACTGTCTATTGTTCCAGATGCTACTTTGTTTGAATAGTGTCTTATaGCTTCAGACTGTAGATCGG +
Preference number: 4 (lower is better)
Translates to: LSKQILTSNCLLFQMLLCLNSVL*LQTVDR
Trigger: CCGATCTACAGTCTGAAGTCATAAGACACTATTCAA...ACAAAGTAGCATCTGGAACAATAGACAGTTTGAAGTTAGAATCTGCTTAGACAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR TCA 90 bp CCAGAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGTTTGTTAAGTTGATTTCATaGCCCACTAATGAGTTAGGA +
Preference number: 4 (lower is better)
Translates to: PEYRVLEIISVICFPNRFVKLIS*PTNELG
Trigger: TCCTAACTCATTAGTGGGTCATGAAATCAACTTAAC...AAACCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTCTGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS-3UTR TCA 90 bp GATTTTAGGGTACATAAACTTTATATGAGAGGGACTGTCTGTTGGAAGCATAATCTTGAGCTGTTAAGTTaGTTTCATGACCCACTAATG +
Preference number: 4 (lower is better)
Translates to: DFRVHKLYMRGTVCWKHNLELLS*FHDPLM
Trigger: CATTAGTGGGTCATGAAATCAACTTAACAGCTCAAG...ATTATGCTTCCAACAGACAGTCCCTCTCATATAAAGTTTATGTACCCTAAAATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS-3UTR TCA 90 bp TTGTCTAAGCAGATTCTAACTTCAAACTGTCTATTGTTCCAGATGCTACTTTGTACCACAGAAACAACATaGCACTGGTATAGCCTATAT +
Preference number: 4 (lower is better)
Translates to: LSKQILTSNCLLFQMLLCTTETT*HWYSLY
Trigger: ATATAGGCTATACCAGTGTCATGTTGTTTCTGTGGT...ACAAAGTAGCATCTGGAACAATAGACAGTTTGAAGTTAGAATCTGCTTAGACAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR GCA 90 bp AAGCGTGACTCTCATTTGAATAACTGTAGAGTAAGCAAACCAGAAATTCTCAATCTTTTCAGTTCCTGTTaGTTTGCTTCCATGAGTTGT +
Preference number: 4 (lower is better)
Translates to: KRDSHLNNCRVSKPEILNLFSSC*FASMSC
Trigger: ACAACTCATGGAAGCAAAGCAACAGGAACTGAAAAG...ATTGAGAATTTCTGGTTTGCTTACTCTACAGTTATTCAAATGAGAGTCACGCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR GCA 90 bp AATATGCTTCCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATAAATTTTATTGCTTGTaGTCCTGGTCTTTGCACAAT +
Preference number: 4 (lower is better)
Translates to: NMLPKQVLEGSLGAVITYKFYCL*SWSLHN
Trigger: ATTGTGCAAAGACCAGGAGCACAAGCAATAAAATTT...ATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGGAAGCATATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR GCA 90 bp AAACTTTATATGAGAGGGACTGTCTGTTGGAAGCATAATACACTATCTAAGATGCTGTTGCTGTCTTACTaGGAAATTCTTCCAGTTTTG +
Preference number: 4 (lower is better)
Translates to: KLYMRGTVCWKHNTLSKMLLLSY*EILPVL
Trigger: CAAAACTGGAAGAATTTCGCAGTAAGACAGCAACAG...CATCTTAGATAGTGTATTATGCTTCCAACAGACAGTCCCTCTCATATAAAGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR GCA 90 bp TTGTCTAAGCAGATTCTAACTTCAAACTGTCTATTGTTCCAGATGCTACTTTGTCTGTTGCTGTCTTACTaGGAAATTCTTCCAGTTTTG +
Preference number: 4 (lower is better)
Translates to: LSKQILTSNCLLFQMLLCLLLSY*EILPVL
Trigger: CAAAACTGGAAGAATTTCGCAGTAAGACAGCAACAG...ACAAAGTAGCATCTGGAACAATAGACAGTTTGAAGTTAGAATCTGCTTAGACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR GCA 90 bp AAACTTTATATGAGAGGGACTGTCTGTTGGAAGCATAATACACTATCTAAGATGTACACTGAGTTTTCGTaGTTCTCTCCAATTATCACC +
Preference number: 4 (lower is better)
Translates to: KLYMRGTVCWKHNTLSKMYTEFS*FSPIIT
Trigger: GGTGATAATTGGAGAGAAGCACGAAAACTCAGTGTA...CATCTTAGATAGTGTATTATGCTTCCAACAGACAGTCCCTCTCATATAAAGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR GCA 90 bp GATTTTAGGGTACATAAACTTTATATGAGAGGGACTGTCTGTTGGAAGCATAATATGGGTACCAAAATATaGTGGGTAGATACACTGAGT +
Preference number: 4 (lower is better)
Translates to: DFRVHKLYMRGTVCWKHNMGTKI*WVDTLS
Trigger: ACTCAGTGTATCTACCCAGCATATTTTGGTACCCAT...ATTATGCTTCCAACAGACAGTCCCTCTCATATAAAGTTTATGTACCCTAAAATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR GCA 90 bp TTGTCTAAGCAGATTCTAACTTCAAACTGTCTATTGTTCCAGATGCTACTTTGTATGGGTACCAAAATATaGTGGGTAGATACACTGAGT +
Preference number: 4 (lower is better)
Translates to: LSKQILTSNCLLFQMLLCMGTKI*WVDTLS
Trigger: ACTCAGTGTATCTACCCAGCATATTTTGGTACCCAT...ACAAAGTAGCATCTGGAACAATAGACAGTTTGAAGTTAGAATCTGCTTAGACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR GCA 90 bp TTGTCTAAGCAGATTCTAACTTCAAACTGTCTATTGTTCCAGATGCTACTTTGTATTCATATCTGTGTATaGAGAACCAGCAGTTGCATC +
Preference number: 4 (lower is better)
Translates to: LSKQILTSNCLLFQMLLCIHICV*RTSSCI
Trigger: GATGCAACTGCTGGTTCTGCATACACAGATATGAAT...ACAAAGTAGCATCTGGAACAATAGACAGTTTGAAGTTAGAATCTGCTTAGACAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR GCA 90 bp TTGTCTAAGCAGATTCTAACTTCAAACTGTCTATTGTTCCAGATGCTACTTTGTGATGTTAATATCCAGTaGCATTCTGGAACTCCTTTG +
Preference number: 4 (lower is better)
Translates to: LSKQILTSNCLLFQMLLCDVNIQ*HSGTPL
Trigger: CAAAGGAGTTCCAGAATGGCACTGGATATTAACATC...ACAAAGTAGCATCTGGAACAATAGACAGTTTGAAGTTAGAATCTGCTTAGACAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR GCA 90 bp AAACTTTATATGAGAGGGACTGTCTGTTGGAAGCATAATACACTATCTAAGATGACATTTGCAACAGTCTaGAGAAATTCTACGCTTGCA +
Preference number: 4 (lower is better)
Translates to: KLYMRGTVCWKHNTLSKMTFATV*RNSTLA
Trigger: TGCAAGCGTAGAATTTCTGCAGACTGTTGCAAATGT...CATCTTAGATAGTGTATTATGCTTCCAACAGACAGTCCCTCTCATATAAAGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR GCA 90 bp TTGTCTAAGCAGATTCTAACTTCAAACTGTCTATTGTTCCAGATGCTACTTTGTACATTTGCAACAGTCTaGAGAAATTCTACGCTTGCA +
Preference number: 4 (lower is better)
Translates to: LSKQILTSNCLLFQMLLCTFATV*RNSTLA
Trigger: TGCAAGCGTAGAATTTCTGCAGACTGTTGCAAATGT...ACAAAGTAGCATCTGGAACAATAGACAGTTTGAAGTTAGAATCTGCTTAGACAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR GCA 90 bp AAACTTTATATGAGAGGGACTGTCTGTTGGAAGCATAATACACTATCTAAGATGAACAAGTCACAGGGCTaGAAAACAGTAGTGATTTTG +
Preference number: 4 (lower is better)
Translates to: KLYMRGTVCWKHNTLSKMNKSQG*KTVVIL
Trigger: CAAAATCACTACTGTTTTGCAGCCCTGTGACTTGTT...CATCTTAGATAGTGTATTATGCTTCCAACAGACAGTCCCTCTCATATAAAGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR GCA 90 bp GGACTGTCTGTTGGAAGCATAATACACTATCTAAGATGTTGGGAATTGTGTTTAGTAATAACTGTAGAATaGTCGGCCAAATTCACTTCT +
Preference number: 4 (lower is better)
Translates to: GLSVGSIIHYLRCWELCLVITVE*SAKFTS
Trigger: AGAAGTGAATTTGGCCGAGCATTCTACAGTTATTAC...TAAACACAATTCCCAACATCTTAGATAGTGTATTATGCTTCCAACAGACAGTCC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CCA 90 bp AAACTTTATATGAGAGGGACTGTCTGTTGGAAGCATAATACACTATCTAAGATGACCACATCCATAACCTaGGGCAAACATTTACTTCAA +
Preference number: 4 (lower is better)
Translates to: KLYMRGTVCWKHNTLSKMTTSIT*GKHLLQ
Trigger: TTGAAGTAAATGTTTGCCCCAGGTTATGGATGTGGT...CATCTTAGATAGTGTATTATGCTTCCAACAGACAGTCCCTCTCATATAAAGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CCA 90 bp TTGTCTAAGCAGATTCTAACTTCAAACTGTCTATTGTTCCAGATGCTACTTTGTACCACATCCATAACCTaGGGCAAACATTTACTTCAA +
Preference number: 4 (lower is better)
Translates to: LSKQILTSNCLLFQMLLCTTSIT*GKHLLQ
Trigger: TTGAAGTAAATGTTTGCCCCAGGTTATGGATGTGGT...ACAAAGTAGCATCTGGAACAATAGACAGTTTGAAGTTAGAATCTGCTTAGACAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR CCA 90 bp CATCCAGAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGTTCAGGTTGAACATCTaGTTGCTGTTCATTAGTATT +
Preference number: 4 (lower is better)
Translates to: HPEYRVLEIISVICFPNRFRLNI*LLFISI
Trigger: AATACTAATGAACAGCAACCAGATGTTCAACCTGAA...CCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTCTGGATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CCA 90 bp CCAGAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGTTTGGTACCAAAATATGCTaGGTAGATACACTGAGTTTT +
Preference number: 4 (lower is better)
Translates to: PEYRVLEIISVICFPNRFGTKIC*VDTLSF
Trigger: AAAACTCAGTGTATCTACCCAGCATATTTTGGTACC...AAACCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTCTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CCA 90 bp CCAGAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGTTTAGATACTTCAGTTACTaGTTCAGGTTTTGGAATGCT +
Preference number: 4 (lower is better)
Translates to: PEYRVLEIISVICFPNRFRYFSY*FRFWNA
Trigger: AGCATTCCAAAACCTGAACCAGTAACTGAAGTATCT...AAACCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTCTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CCA 90 bp AAACTTTATATGAGAGGGACTGTCTGTTGGAAGCATAATACACTATCTAAGATGCATATCGATCACTTGTaGATCTGTACCTTTCTGAGT +
Preference number: 4 (lower is better)
Translates to: KLYMRGTVCWKHNTLSKMHIDHL*ICTFLS
Trigger: ACTCAGAAAGGTACAGATCCACAAGTGATCGATATG...CATCTTAGATAGTGTATTATGCTTCCAACAGACAGTCCCTCTCATATAAAGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CCA 90 bp GATTTTAGGGTACATAAACTTTATATGAGAGGGACTGTCTGTTGGAAGCATAATGATACCAAGATTCCATaGTCTAAAATCCTCAGTCTG +
Preference number: 4 (lower is better)
Translates to: DFRVHKLYMRGTVCWKHNDTKIP*SKILSL
Trigger: CAGACTGAGGATTTTAGACCATGGAATCTTGGTATC...ATTATGCTTCCAACAGACAGTCCCTCTCATATAAAGTTTATGTACCCTAAAATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CCA 90 bp TTGTCTAAGCAGATTCTAACTTCAAACTGTCTATTGTTCCAGATGCTACTTTGTATTTTAAATGTAGCCTaGCTTTACCCAACTGTGCAG +
Preference number: 4 (lower is better)
Translates to: LSKQILTSNCLLFQMLLCILNVA*LYPTVQ
Trigger: CTGCACAGTTGGGTAAAGCCAGGCTACATTTAAAAT...ACAAAGTAGCATCTGGAACAATAGACAGTTTGAAGTTAGAATCTGCTTAGACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR CCA 90 bp AAACTTTATATGAGAGGGACTGTCTGTTGGAAGCATAATACACTATCTAAGATGTTAATACGTGATATCTaGGAATGTCCTGCAGATCTC +
Preference number: 4 (lower is better)
Translates to: KLYMRGTVCWKHNTLSKMLIRDI*ECPADL
Trigger: GAGATCTGCAGGACATTCCCAGATATCACGTATTAA...CATCTTAGATAGTGTATTATGCTTCCAACAGACAGTCCCTCTCATATAAAGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CCA 90 bp CATCCAGAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGTTGAGCTCCTTTGATTaGTTTTGTAACAATTCCTGT +
Preference number: 4 (lower is better)
Translates to: HPEYRVLEIISVICFPNRLSSFD*FCNNSC
Trigger: ACAGGAATTGTTACAAAACCAATCAAAGGAGCTCAA...CCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTCTGGATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CCA 90 bp CCAGAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGTTTACAATACACCACGTCTaGTTATCATTAGCATATCTG +
Preference number: 4 (lower is better)
Translates to: PEYRVLEIISVICFPNRFTIHHV*LSLAYL
Trigger: CAGATATGCTAATGATAACCAGACGTGGTGTATTGT...AAACCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTCTGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CCA 90 bp AAGCGTGACTCTCATTTGAATAACTGTAGAGTAAGCAAACCAGAAATTCTCAATAGAGGGACTGTCTGTTaGAAGCATAATACACTATCT +
Preference number: 4 (lower is better)
Translates to: KRDSHLNNCRVSKPEILNRGTVC*KHNTLS
Trigger: AGATAGTGTATTATGCTTCCAACAGACAGTCCCTCT...ATTGAGAATTTCTGGTTTGCTTACTCTACAGTTATTCAAATGAGAGTCACGCTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CCA 90 bp GGACTGTCTGTTGGAAGCATAATACACTATCTAAGATGTTGGGAATTGTGTTTAAAATTCTCAATCTATTaGCAACGGGACAGGTTATTG +
Preference number: 4 (lower is better)
Translates to: GLSVGSIIHYLRCWELCLKFSIY*QRDRLL
Trigger: CAATAACCTGTCCCGTTGCCAATAGATTGAGAATTT...TAAACACAATTCCCAACATCTTAGATAGTGTATTATGCTTCCAACAGACAGTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR TCA 90 bp GATTTTAGGGTACATAAACTTTATATGAGAGGGACTGTCTGTTGGAAGCATAATGTTTATTTCAGTTTCTaGAGGCCTCATAATCATCTC +
Preference number: 4 (lower is better)
Translates to: DFRVHKLYMRGTVCWKHNVYFSF*RPHNHL
Trigger: GAGATGATTATGAGGCCTTCAGAAACTGAAATAAAC...ATTATGCTTCCAACAGACAGTCCCTCTCATATAAAGTTTATGTACCCTAAAATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR TCA 90 bp TTGTCTAAGCAGATTCTAACTTCAAACTGTCTATTGTTCCAGATGCTACTTTGTGTTTATTTCAGTTTCTaGAGGCCTCATAATCATCTC +
Preference number: 4 (lower is better)
Translates to: LSKQILTSNCLLFQMLLCVYFSF*RPHNHL
Trigger: GAGATGATTATGAGGCCTTCAGAAACTGAAATAAAC...ACAAAGTAGCATCTGGAACAATAGACAGTTTGAAGTTAGAATCTGCTTAGACAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR TCA 90 bp GATTTTAGGGTACATAAACTTTATATGAGAGGGACTGTCTGTTGGAAGCATAATCAAATATACATTTCTTaGAAGACCGCATCAGTCACA +
Preference number: 4 (lower is better)
Translates to: DFRVHKLYMRGTVCWKHNQIYIS*KTASVT
Trigger: TGTGACTGATGCGGTCTTTCAAGAAATGTATATTTG...ATTATGCTTCCAACAGACAGTCCCTCTCATATAAAGTTTATGTACCCTAAAATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR TCA 90 bp AAGCGTGACTCTCATTTGAATAACTGTAGAGTAAGCAAACCAGAAATTCTCAATCTAAAATCCTCAGTCTaGTCAATTTCTAAGGGTTCA +
Preference number: 4 (lower is better)
Translates to: KRDSHLNNCRVSKPEILNLKSSV*SISKGS
Trigger: TGAACCCTTAGAAATTGATCAGACTGAGGATTTTAG...ATTGAGAATTTCTGGTTTGCTTACTCTACAGTTATTCAAATGAGAGTCACGCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR TCA 90 bp TTGTCTAAGCAGATTCTAACTTCAAACTGTCTATTGTTCCAGATGCTACTTTGTATCCTAATGGTATGTTaGATTCATTTTCAGGTGAGG +
Preference number: 4 (lower is better)
Translates to: LSKQILTSNCLLFQMLLCILMVC*IHFQVR
Trigger: CCTCACCTGAAAATGAATTCAACATACCATTAGGAT...ACAAAGTAGCATCTGGAACAATAGACAGTTTGAAGTTAGAATCTGCTTAGACAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR GCA 90 bp GAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGTTTTGGCTATGTTTTCTAATATaGTTCCATGACCACATCCAT +
Preference number: 4 (lower is better)
Translates to: EYRVLEIISVICFPNRFWLCFLI*FHDHIH
Trigger: ATGGATGTGGTCATGGAAGCATATTAGAAAACATAG...CCAAAACCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR GCA 90 bp CCAGAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGTTTAAATTTTATTGCTTGTaGTCCTGGTCTTTGCACAAT +
Preference number: 4 (lower is better)
Translates to: PEYRVLEIISVICFPNRFKFYCL*SWSLHN
Trigger: ATTGTGCAAAGACCAGGAGCACAAGCAATAAAATTT...AAACCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTCTGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR GCA 90 bp GAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGTTTTGGAGTTTCAAATTTTATTaGTTGTGCTCCTGGTCTTTG +
Preference number: 4 (lower is better)
Translates to: EYRVLEIISVICFPNRFWSFKFY*LCSWSL
Trigger: CAAAGACCAGGAGCACAAGCAATAAAATTTGAAACT...CCAAAACCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR GCA 90 bp AAGCGTGACTCTCATTTGAATAACTGTAGAGTAAGCAAACCAGAAATTCTCAATAGTTCCAAATTGAAGTaGATGGGTACCAAAATATGC +
Preference number: 4 (lower is better)
Translates to: KRDSHLNNCRVSKPEILNSSKLK*MGTKIC
Trigger: GCATATTTTGGTACCCATGCACTTCAATTTGGAACT...ATTGAGAATTTCTGGTTTGCTTACTCTACAGTTATTCAAATGAGAGTCACGCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR GCA 90 bp TTGTCTAAGCAGATTCTAACTTCAAACTGTCTATTGTTCCAGATGCTACTTTGTATAGGTGGCCACAAATaGATTATGTATGGTAAATCC +
Preference number: 4 (lower is better)
Translates to: LSKQILTSNCLLFQMLLCIGGHK*IMYGKS
Trigger: GGATTTACCATACATAATGCATTTGTGGCCACCTAT...ACAAAGTAGCATCTGGAACAATAGACAGTTTGAAGTTAGAATCTGCTTAGACAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR GCA 90 bp GATTTTAGGGTACATAAACTTTATATGAGAGGGACTGTCTGTTGGAAGCATAATGTAATAACTGTAGAATaGTCGGCCAAATTCACTTCT +
Preference number: 4 (lower is better)
Translates to: DFRVHKLYMRGTVCWKHNVITVE*SAKFTS
Trigger: AGAAGTGAATTTGGCCGAGCATTCTACAGTTATTAC...ATTATGCTTCCAACAGACAGTCCCTCTCATATAAAGTTTATGTACCCTAAAATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR GCA 90 bp GAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGTTTTGGGTGGCACATACAACATaGATTGAATACTCTGTATTA +
Preference number: 4 (lower is better)
Translates to: EYRVLEIISVICFPNRFWVAHTT*IEYSVL
Trigger: TAATACAGAGTATTCAATGCATGTTGTATGTGCCAC...CCAAAACCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CCA 90 bp GATTTTAGGGTACATAAACTTTATATGAGAGGGACTGTCTGTTGGAAGCATAATGGTACCAAAATATGCTaGGTAGATACACTGAGTTTT +
Preference number: 4 (lower is better)
Translates to: DFRVHKLYMRGTVCWKHNGTKIC*VDTLSF
Trigger: AAAACTCAGTGTATCTACCCAGCATATTTTGGTACC...ATTATGCTTCCAACAGACAGTCCCTCTCATATAAAGTTTATGTACCCTAAAATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CCA 90 bp TTGTCTAAGCAGATTCTAACTTCAAACTGTCTATTGTTCCAGATGCTACTTTGTGGTACCAAAATATGCTaGGTAGATACACTGAGTTTT +
Preference number: 4 (lower is better)
Translates to: LSKQILTSNCLLFQMLLCGTKIC*VDTLSF
Trigger: AAAACTCAGTGTATCTACCCAGCATATTTTGGTACC...ACAAAGTAGCATCTGGAACAATAGACAGTTTGAAGTTAGAATCTGCTTAGACAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR CCA 90 bp AAGCGTGACTCTCATTTGAATAACTGTAGAGTAAGCAAACCAGAAATTCTCAATATCTTCAGAAACAGATaGAAGTTCCAAGAGAGGAAT +
Preference number: 4 (lower is better)
Translates to: KRDSHLNNCRVSKPEILNIFRNR*KFQERN
Trigger: ATTCCTCTCTTGGAACTTCCATCTGTTTCTGAAGAT...ATTGAGAATTTCTGGTTTGCTTACTCTACAGTTATTCAAATGAGAGTCACGCTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CCA 90 bp AAACTTTATATGAGAGGGACTGTCTGTTGGAAGCATAATACACTATCTAAGATGATCTTCAGAAACAGATaGAAGTTCCAAGAGAGGAAT +
Preference number: 4 (lower is better)
Translates to: KLYMRGTVCWKHNTLSKMIFRNR*KFQERN
Trigger: ATTCCTCTCTTGGAACTTCCATCTGTTTCTGAAGAT...CATCTTAGATAGTGTATTATGCTTCCAACAGACAGTCCCTCTCATATAAAGTTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CCA 90 bp TTGTCTAAGCAGATTCTAACTTCAAACTGTCTATTGTTCCAGATGCTACTTTGTATCTTCAGAAACAGATaGAAGTTCCAAGAGAGGAAT +
Preference number: 4 (lower is better)
Translates to: LSKQILTSNCLLFQMLLCIFRNR*KFQERN
Trigger: ATTCCTCTCTTGGAACTTCCATCTGTTTCTGAAGAT...ACAAAGTAGCATCTGGAACAATAGACAGTTTGAAGTTAGAATCTGCTTAGACAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR CCA 90 bp AAGCGTGACTCTCATTTGAATAACTGTAGAGTAAGCAAACCAGAAATTCTCAATAAGAATGAACTCCATTaGTTTCAGCTGAGCATTTAC +
Preference number: 4 (lower is better)
Translates to: KRDSHLNNCRVSKPEILNKNELH*FQLSIY
Trigger: GTAAATGCTCAGCTGAAACCAATGGAGTTCATTCTT...ATTGAGAATTTCTGGTTTGCTTACTCTACAGTTATTCAAATGAGAGTCACGCTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CCA 90 bp GGACTGTCTGTTGGAAGCATAATACACTATCTAAGATGTTGGGAATTGTGTTTAGATCTGACTCAACAATaGCCATTTTTGCTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: GLSVGSIIHYLRCWELCLDLTQQ*PFLLSF
Trigger: AAAAGAAAGCAAAAATGGCCATTGTTGAGTCAGATC...TAAACACAATTCCCAACATCTTAGATAGTGTATTATGCTTCCAACAGACAGTCC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CCA 90 bp GGACTGTCTGTTGGAAGCATAATACACTATCTAAGATGTTGGGAATTGTGTTTATTTTTCCAAACTCTCTaGCATGAAATACAGACTTCA +
Preference number: 4 (lower is better)
Translates to: GLSVGSIIHYLRCWELCLFFQTL*HEIQTS
Trigger: TGAAGTCTGTATTTCATGCCAGAGAGTTTGGAAAAA...TAAACACAATTCCCAACATCTTAGATAGTGTATTATGCTTCCAACAGACAGTCC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CCA 90 bp GAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGTTTTGGTTTTTCCAAACTCTCTaGCATGAAATACAGACTTCA +
Preference number: 4 (lower is better)
Translates to: EYRVLEIISVICFPNRFWFFQTL*HEIQTS
Trigger: TGAAGTCTGTATTTCATGCCAGAGAGTTTGGAAAAA...CCAAAACCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360280.8
ENST00000376636.7
ENST00000467124.1
CDS-3UTR CCA 90 bp CCAGAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGTTTTTAATAGTAACTTGGTaGCACATACAACATGCATTG +
Preference number: 4 (lower is better)
Translates to: PEYRVLEIISVICFPNRFLIVTW*HIQHAL
Trigger: CAATGCATGTTGTATGTGCCACCAAGTTACTATTAA...AAACCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTCTGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR GCA 90 bp AAGCGTGACTCTCATTTGAATAACTGTAGAGTAAGCAAACCAGAAATTCTCAATCTATGTTTTCTAATATaGTTCCATGACCACATCCAT +
Preference number: 4 (lower is better)
Translates to: KRDSHLNNCRVSKPEILNLCFLI*FHDHIH
Trigger: ATGGATGTGGTCATGGAAGCATATTAGAAAACATAG...ATTGAGAATTTCTGGTTTGCTTACTCTACAGTTATTCAAATGAGAGTCACGCTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR GCA 90 bp TTGTCTAAGCAGATTCTAACTTCAAACTGTCTATTGTTCCAGATGCTACTTTGTCTATGTTTTCTAATATaGTTCCATGACCACATCCAT +
Preference number: 4 (lower is better)
Translates to: LSKQILTSNCLLFQMLLCLCFLI*FHDHIH
Trigger: ATGGATGTGGTCATGGAAGCATATTAGAAAACATAG...ACAAAGTAGCATCTGGAACAATAGACAGTTTGAAGTTAGAATCTGCTTAGACAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR GCA 90 bp AAACTTTATATGAGAGGGACTGTCTGTTGGAAGCATAATACACTATCTAAGATGATGAGTACATACATCTaGTTAATGGCCTGTTTTGAA +
Preference number: 4 (lower is better)
Translates to: KLYMRGTVCWKHNTLSKMMSTYI*LMACFE
Trigger: TTCAAAACAGGCCATTAAGCAGATGTATGTACTCAT...CATCTTAGATAGTGTATTATGCTTCCAACAGACAGTCCCTCTCATATAAAGTTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR GCA 90 bp AAACTTTATATGAGAGGGACTGTCTGTTGGAAGCATAATACACTATCTAAGATGGTGGCACATACAACATaGATTGAATACTCTGTATTA +
Preference number: 4 (lower is better)
Translates to: KLYMRGTVCWKHNTLSKMVAHTT*IEYSVL
Trigger: TAATACAGAGTATTCAATGCATGTTGTATGTGCCAC...CATCTTAGATAGTGTATTATGCTTCCAACAGACAGTCCCTCTCATATAAAGTTT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CCA 90 bp TTGTCTAAGCAGATTCTAACTTCAAACTGTCTATTGTTCCAGATGCTACTTTGTTTCAGGTTGAACATCTaGTTGCTGTTCATTAGTATT +
Preference number: 4 (lower is better)
Translates to: LSKQILTSNCLLFQMLLCFRLNI*LLFISI
Trigger: AATACTAATGAACAGCAACCAGATGTTCAACCTGAA...ACAAAGTAGCATCTGGAACAATAGACAGTTTGAAGTTAGAATCTGCTTAGACAA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR CCA 90 bp AAGCGTGACTCTCATTTGAATAACTGTAGAGTAAGCAAACCAGAAATTCTCAATAATGATCATTGTCCTTaGTTCGGATATAATCCATAC +
Preference number: 4 (lower is better)
Translates to: KRDSHLNNCRVSKPEILNNDHCP*FGYNPY
Trigger: GTATGGATTATATCCGAACCAAGGACAATGATCATT...ATTGAGAATTTCTGGTTTGCTTACTCTACAGTTATTCAAATGAGAGTCACGCTT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CCA 90 bp TTGTCTAAGCAGATTCTAACTTCAAACTGTCTATTGTTCCAGATGCTACTTTGTAATGATCATTGTCCTTaGTTCGGATATAATCCATAC +
Preference number: 4 (lower is better)
Translates to: LSKQILTSNCLLFQMLLCNDHCP*FGYNPY
Trigger: GTATGGATTATATCCGAACCAAGGACAATGATCATT...ACAAAGTAGCATCTGGAACAATAGACAGTTTGAAGTTAGAATCTGCTTAGACAA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR CCA 90 bp TTGTCTAAGCAGATTCTAACTTCAAACTGTCTATTGTTCCAGATGCTACTTTGTTTGAGCTCCTTTGATTaGTTTTGTAACAATTCCTGT +
Preference number: 4 (lower is better)
Translates to: LSKQILTSNCLLFQMLLCLSSFD*FCNNSC
Trigger: ACAGGAATTGTTACAAAACCAATCAAAGGAGCTCAA...ACAAAGTAGCATCTGGAACAATAGACAGTTTGAAGTTAGAATCTGCTTAGACAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR CCA 90 bp GATTTTAGGGTACATAAACTTTATATGAGAGGGACTGTCTGTTGGAAGCATAATTTTTTCCAAACTCTCTaGCATGAAATACAGACTTCA +
Preference number: 4 (lower is better)
Translates to: DFRVHKLYMRGTVCWKHNFFQTL*HEIQTS
Trigger: TGAAGTCTGTATTTCATGCCAGAGAGTTTGGAAAAA...ATTATGCTTCCAACAGACAGTCCCTCTCATATAAAGTTTATGTACCCTAAAATC
34% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS CCA 90 bp CGGAGGCGGTCGCTCTCACGACGCGTGCGCAAGTCTGCGCGCGGCTaGAGGCGGAGCGCGGCGCAGACCTGGGCGCGCAGCCCTGAGAGG +
Preference number: 5 (lower is better)
Translates to: RRRSLSRRVRKSARG*RRSAAQTWARSPER
Trigger: CCTCTCAGGGCTGCGCGCCCAGGTCTGCGCCGCGCTCCGCCTCCAGCCGCGCGCAGACTTGCGCACGCGTCGTGAGAGCGACCGCCTCCG
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376636.7
CDS GCA 90 bp CAGCGAGAGACGGAGGCGGTCGCTCTCACGACGCGTGCGCAAGTCTaGGCGCGGCTGGAGGCGGAGCGCGGCGCAGACCTGGGCGCGCAG +
Preference number: 5 (lower is better)
Translates to: QRETEAVALTTRAQV*ARLEAERGADLGAQ
Trigger: CTGCGCGCCCAGGTCTGCGCCGCGCTCCGCCTCCAGCCGCGCGCAGACTTGCGCACGCGTCGTGAGAGCGACCGCCTCCGTCTCTCGCTG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376636.7
CDS GCA 90 bp CTCCCTCGAGGTAATTCGGTTCACCGGCTCCGGGGCGGCTTCAGCTaGGGCGCCCCCGCTGGCCCAACGCGCAGCCCTAGCGAGCCCAGC +
Preference number: 5 (lower is better)
Translates to: LPRGNSVHRLRGGFS*GAPAGPTRSPSEPS
Trigger: GCTGGGCTCGCTAGGGCTGCGCGTTGGGCCAGCGGGGGCGCCGCAGCTGAAGCCGCCCCGGAGCCGGTGAACCGAATTACCTCGAGGGAG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360280.8
ENST00000376636.7
ENST00000643348.1
ENST00000645632.1
CDS GCA 90 bp CTAGCGAGCCCAGCGAGAGACGGAGGCGGTCGCTCTCACGACGCGTaGGCAAGTCTGCGCGCGGCTGGAGGCGGAGCGCGGCGCAGACCT +
Preference number: 5 (lower is better)
Translates to: LASPARDGGGRSHDA*ASLRAAGGGARRRP
Trigger: AGGTCTGCGCCGCGCTCCGCCTCCAGCCGCGCGCAGACTTGCGCACGCGTCGTGAGAGCGACCGCCTCCGTCTCTCGCTGGGCTCGCTAG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376636.7
CDS CCA 90 bp CCTAGAGGGTTGGCCTCAAAAGGCAGCTGGGCACTTGCAGATTGTTaGCAGCATCACCAGGACATTCTGTATGGATTCTACCTCCATTGG +
Preference number: 5 (lower is better)
Translates to: PRGLASKGSWALADC*QHHQDILYGFYLHW
Trigger: CCAATGGAGGTAGAATCCATACAGAATGTCCTGGTGATGCTGCCAACAATCTGCAAGTGCCCAGCTGCCTTTTGAGGCCAACCCTCTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493341.1
CDS-3UTR CAA 90 bp GACACTACACCCAGGGAGGCAGGGGACTGTAATTTTTCTGAGAATGGTGAAATCCGGGCAGGCTCTCACTaGGAGATCTTTAATGGCAGC +
Preference number: 5 (lower is better)
Translates to: DTTPREAGDCNFSENGEIRAGSH*EIFNGS
Trigger: GCTGCCATTAAAGATCTCCAAGTGAGAGCCTGCCCG...GATTTCACCATTCTCAGAAAAATTACAGTCCCCTGCCTCCCTGGGTGTAGTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS-3UTR CAA 90 bp GGTTTCTACAGCAGTGCCTGTGGTGTAGGCCTCAAGAAAGACATTTGCAACAGTAAGGCAGCTGGGCACTaGCAGATTGTTGGCAGCATC +
Preference number: 5 (lower is better)
Translates to: GFYSSACGVGLKKDICNSKAAGH*QIVGSI
Trigger: GATGCTGCCAACAATCTGCAAGTGCCCAGCTGCCTT...ACTGTTGCAAATGTCTTTCTTGAGGCCTACACCACAGGCACTGCTGTAGAAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493341.1
CDS GCA 90 bp ACTCCTTTGTGCGAGTTCTTTTACACCAGTAGCAGCCATTCCAGCTaGCTGAACAGTTGCCTCAGCCAAGGCTTGTTTAGCTGCCTGAAA +
Preference number: 5 (lower is better)
Translates to: TPLCEFFYTSSSHSS*LNSCLSQGLFSCLK
Trigger: TTTCAGGCAGCTAAACAAGCCTTGGCTGAGGCAACTGTTCAGGCAGCTGGAATGGCTGCTACTGGTGTAAAAGAACTCGCACAAAGGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360280.8
ENST00000376636.7
ENST00000423463.6
ENST00000493341.1
ENST00000643348.1
ENST00000645632.1
CDS-3UTR CAA 90 bp GTAAGGCACGTGAATGTACTTCTACCACAGCAGCTGTCACCACAGTTGCTCCTCCACTGTATTGGTCTTTaGTTACAGCAGGTGAGGCAC +
Preference number: 5 (lower is better)
Translates to: VRHVNVLLPQQLSPQLLLHCIGL*LQQVRH
Trigger: GTGCCTCACCTGCTGTAACAAAAGACCAATACAGTG...GAGGAGCAACTGTGGTGACAGCTGCTGTGGTAGAAGTACATTCACGTGCCTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493341.1
CDS-3UTR CAA 90 bp CTAAGGTCAGGCTCCACACAATCCAGACTCTTCCAACAATCACTGGATGGCCGGATTTTGCCTTTTCTCTaGACTGGAAGAAACGGGCAG +
Preference number: 5 (lower is better)
Translates to: LRSGSTQSRLFQQSLDGRILPFL*TGRNGQ
Trigger: CTGCCCGTTTCTTCCAGTCAAGAGAAAAGGCAAAAT...CCGGCCATCCAGTGATTGTTGGAAGAGTCTGGATTGTGTGGAGCCTGACCTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS-3UTR CAA 90 bp GGTACAAAGGCTTCCAACAAATCTAGCAAATCCAGTGCAGAACTAAGAACACCCCAGCTGCCTGAACAGTaGCCTCAGCCAAGGCTTGTT +
Preference number: 5 (lower is better)
Translates to: GTKASNKSSKSSAELRTPQLPEQ*PQPRLV
Trigger: AACAAGCCTTGGCTGAGGCAACTGTTCAGGCAGCTG...GGGTGTTCTTAGTTCTGCACTGGATTTGCTAGATTTGTTGGAAGCCTTTGTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR CAA 90 bp GCAGGAAGAGGGTCATGGCCATTTAAGCATTTTCAAAGGCAAAGCACAAGAATCCGGGCAGGCTCTCACTaGGAGATCTTTAATGGCAGC +
Preference number: 5 (lower is better)
Translates to: AGRGSWPFKHFQRQSTRIRAGSH*EIFNGS
Trigger: GCTGCCATTAAAGATCTCCAAGTGAGAGCCTGCCCG...GATTCTTGTGCTTTGCCTTTGAAAATGCTTAAATGGCCATGACCCTCTTCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR CAA 90 bp GCAGGAAGAGGGTCATGGCCATTTAAGCATTTTCAAAGGCAAAGCACAAGAATCTGCCTCCAGTTGGCCTaGCTACCGCTCCTACTAAAC +
Preference number: 5 (lower is better)
Translates to: AGRGSWPFKHFQRQSTRICLQLA*LPLLLN
Trigger: GTTTAGTAGGAGCGGTAGCAAGGCCAACTGGAGGCA...GATTCTTGTGCTTTGCCTTTGAAAATGCTTAAATGGCCATGACCCTCTTCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS GCA 90 bp TGGGGCTTTGATGTTAATATCCAGTGCCATTCTGGAACTCCTTTGTaGGAGTTCTTTTACACCAGTAGCAGCCATTCCAGCTGCCTGAAC +
Preference number: 5 (lower is better)
Translates to: WGFDVNIQCHSGTPL*EFFYTSSSHSSCLN
Trigger: GTTCAGGCAGCTGGAATGGCTGCTACTGGTGTAAAAGAACTCGCACAAAGGAGTTCCAGAATGGCACTGGATATTAACATCAAAGCCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360280.8
ENST00000376636.7
ENST00000423463.6
ENST00000493341.1
ENST00000643348.1
ENST00000645632.1
CDS GCA 90 bp AGACTGCGGGATGACCACAACTGGGGCTTTGATGTTAATATCCAGTaGCATTCTGGAACTCCTTTGTGCGAGTTCTTTTACACCAGTAGC +
Preference number: 5 (lower is better)
Translates to: RLRDDHNWGFDVNIQ*HSGTPLCEFFYTSS
Trigger: GCTACTGGTGTAAAAGAACTCGCACAAAGGAGTTCCAGAATGGCACTGGATATTAACATCAAAGCCCCAGTTGTGGTCATCCCGCAGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360280.8
ENST00000376636.7
ENST00000423463.6
ENST00000493341.1
ENST00000643348.1
ENST00000645632.1
CDS-3UTR CAA 90 bp CTAAGGTCAGGCTCCACACAATCCAGACTCTTCCAACAATCACTGGATGGCCGGTATACAGTAGACCTGTaGCTGTCTTACTGCGAAATT +
Preference number: 5 (lower is better)
Translates to: LRSGSTQSRLFQQSLDGRYTVDL*LSYCEI
Trigger: AATTTCGCAGTAAGACAGCAACAGGTCTACTGTATA...CCGGCCATCCAGTGATTGTTGGAAGAGTCTGGATTGTGTGGAGCCTGACCTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS-3UTR CAA 90 bp ATGGTGAATCAGCCAAAAGGTAGATGGTGCAGATTCAACGGACTCAAAAGGACAATAGCACCGGTGATTTaGGAGGCAGCACCAGCCAAT +
Preference number: 5 (lower is better)
Translates to: MVNQPKGRWCRFNGLKRTIAPVI*EAAPAN
Trigger: ATTGGCTGGTGCTGCCTCCAAAATCACCGGTGCTAT...TGTCCTTTTGAGTCCGTTGAATCTGCACCATCTACCTTTTGGCTGATTCACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS-3UTR CAA 90 bp CTAAGGTCAGGCTCCACACAATCCAGACTCTTCCAACAATCACTGGATGGCCGGATGAAGTATTTCGTTTaGGATGAGGACAGTCTGATG +
Preference number: 5 (lower is better)
Translates to: LRSGSTQSRLFQQSLDGRMKYFV*DEDSLM
Trigger: CATCAGACTGTCCTCATCCAAAACGAAATACTTCAT...CCGGCCATCCAGTGATTGTTGGAAGAGTCTGGATTGTGTGGAGCCTGACCTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS-3UTR CAA 90 bp GTGATTTTGCCTTTTCTCTTGACTGGAAGAAACGGGCAGGCTCTCACTTGGAGAACTAGTGGCACTGTATaGGTCTTTTGTTACAGCAGG +
Preference number: 5 (lower is better)
Translates to: VILPFLLTGRNGQALTWRTSGTV*VFCYSR
Trigger: CCTGCTGTAACAAAAGACCAATACAGTGCCACTAGT...TCTCCAAGTGAGAGCCTGCCCGTTTCTTCCAGTCAAGAGAAAAGGCAAAATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000493341.1
CDS-3UTR CAA 90 bp AACTTGGCTCCATGTGGAGATGAATTATGGGCAGCCTCTCCACCATTACAGAGAAGCTGCTCCTCCTTTTaGAGCTCCTTTGATTGGTTT +
Preference number: 5 (lower is better)
Translates to: NLAPCGDELWAASPPLQRSCSSF*SSFDWF
Trigger: AAACCAATCAAAGGAGCTCAAAAAGGAGGAGCAGCT...TCTCTGTAATGGTGGAGAGGCTGCCCATAATTCATCTCCACATGGAGCCAAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CAA 90 bp TGTAATATGCTTCCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTGCCTCCAGTTGGCCTaGCTACCGCTCCTACTAAAC +
Preference number: 5 (lower is better)
Translates to: CNMLPKQVLEGSLGAVITCLQLA*LPLLLN
Trigger: GTTTAGTAGGAGCGGTAGCAAGGCCAACTGGAGGCA...AGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGGAAGCATATTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CAA 90 bp GTCTTCAGGCAGTGTTCTCTGTCAGAGGCTCGGAGAAGGTTCTCTTGCTTCTTGGCATCCTCTGGGGTCTaGAAGTTAATTATTTTTCCA +
Preference number: 5 (lower is better)
Translates to: VFRQCSLSEARRRFSCFLASSGV*KLIIFP
Trigger: TGGAAAAATAATTAACTTCAAGACCCCAGAGGATGC...CAAGAAGCAAGAGAACCTTCTCCGAGCCTCTGACAGAGAACACTGCCTGAAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467124.1
CDS-3UTR CAA 90 bp TGTCAGAGGCTCGGAGAAGGTTCTCTTGCTTCTTGTAGCTTTGTGAGGATCCAAAGCTGTAATCACTTATaGCTGTGTGTCTTCAGGCAG +
Preference number: 5 (lower is better)
Translates to: CQRLGEGSLASCSFVRIQSCNHL*LCVFRQ
Trigger: CTGCCTGAAGACACACAGCAATAAGTGATTACAGCT...TTGGATCCTCACAAAGCTACAAGAAGCAAGAGAACCTTCTCCGAGCCTCTGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467124.1
CDS-3UTR CAA 90 bp GGTACAAAGGCTTCCAACAAATCTAGCAAATCCAGTGCAGAACTAAGAACACCCTGCCTCAGCCAAGGCTaGTTTAGCTGCCTGAAAATT +
Preference number: 5 (lower is better)
Translates to: GTKASNKSSKSSAELRTPCLSQG*FSCLKI
Trigger: AATTTTCAGGCAGCTAAACAAGCCTTGGCTGAGGCA...GGGTGTTCTTAGTTCTGCACTGGATTTGCTAGATTTGTTGGAAGCCTTTGTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR CAA 90 bp GGTACAAAGGCTTCCAACAAATCTAGCAAATCCAGTGCAGAACTAAGAACACCCCACTGTATTGGTCTTTaGTTACAGCAGGTGAGGCAC +
Preference number: 5 (lower is better)
Translates to: GTKASNKSSKSSAELRTPHCIGL*LQQVRH
Trigger: GTGCCTCACCTGCTGTAACAAAAGACCAATACAGTG...GGGTGTTCTTAGTTCTGCACTGGATTTGCTAGATTTGTTGGAAGCCTTTGTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR CAA 90 bp GCAGGAAGAGGGTCATGGCCATTTAAGCATTTTCAAAGGCAAAGCACAAGAATCCTTAGCAGTCCATGTTaGCACACTGGTTTCTACAGC +
Preference number: 5 (lower is better)
Translates to: AGRGSWPFKHFQRQSTRILSSPC*HTGFYS
Trigger: GCTGTAGAAACCAGTGTGCAAACATGGACTGCTAAG...GATTCTTGTGCTTTGCCTTTGAAAATGCTTAAATGGCCATGACCCTCTTCCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR CAA 90 bp AATATGCTTCCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATCGGGCAGGCTCTCACTaGGAGATCTTTAATGGCAGC +
Preference number: 5 (lower is better)
Translates to: NMLPKQVLEGSLGAVITYRAGSH*EIFNGS
Trigger: GCTGCCATTAAAGATCTCCAAGTGAGAGCCTGCCCG...ATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGGAAGCATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CAA 90 bp ATGGTGAATCAGCCAAAAGGTAGATGGTGCAGATTCAACGGACTCAAAAGGACACATCTTGCCTTCTTCTaGGGCTTTGTTTCCCAAACC +
Preference number: 5 (lower is better)
Translates to: MVNQPKGRWCRFNGLKRTHLAFF*GFVSQT
Trigger: GGTTTGGGAAACAAAGCCCAAGAAGAAGGCAAGATG...TGTCCTTTTGAGTCCGTTGAATCTGCACCATCTACCTTTTGGCTGATTCACCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS-3UTR CAA 90 bp GGTACAAAGGCTTCCAACAAATCTAGCAAATCCAGTGCAGAACTAAGAACACCCCATCTTGCCTTCTTCTaGGGCTTTGTTTCCCAAACC +
Preference number: 5 (lower is better)
Translates to: GTKASNKSSKSSAELRTPHLAFF*GFVSQT
Trigger: GGTTTGGGAAACAAAGCCCAAGAAGAAGGCAAGATG...GGGTGTTCTTAGTTCTGCACTGGATTTGCTAGATTTGTTGGAAGCCTTTGTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR CAA 90 bp ATGGTGAATCAGCCAAAAGGTAGATGGTGCAGATTCAACGGACTCAAAAGGACACTTCCCAAACAGGTTTaGGAAGGTAGTCTAGGAGCT +
Preference number: 5 (lower is better)
Translates to: MVNQPKGRWCRFNGLKRTLPKQV*EGSLGA
Trigger: AGCTCCTAGACTACCTTCCAAAACCTGTTTGGGAAG...TGTCCTTTTGAGTCCGTTGAATCTGCACCATCTACCTTTTGGCTGATTCACCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS-3UTR CAA 90 bp CAATGTTCATTTTTATCATCTCGCCTTTGGGTACCAATTCAGTTGTGGGAGCTAAATGAACCTAGAGGGTaGGCCTCAAAAGGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: QCSFLSSRLWVPIQLWELNEPRG*ASKGSW
Trigger: CCAGCTGCCTTTTGAGGCCAACCCTCTAGGTTCATT...TAGCTCCCACAACTGAATTGGTACCCAAAGGCGAGATGATAAAAATGAACATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493341.1
CDS GCA 90 bp GAGTTCTTTTACACCAGTAGCAGCCATTCCAGCTGCCTGAACAGTTaGCTCAGCCAAGGCTTGTTTAGCTGCCTGAAAATTATCTATAAA +
Preference number: 5 (lower is better)
Translates to: EFFYTSSSHSSCLNS*LSQGLFSCLKIIYK
Trigger: TTTATAGATAATTTTCAGGCAGCTAAACAAGCCTTGGCTGAGGCAACTGTTCAGGCAGCTGGAATGGCTGCTACTGGTGTAAAAGAACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360280.8
ENST00000376636.7
ENST00000423463.6
ENST00000493341.1
ENST00000643348.1
ENST00000645632.1
CDS-3UTR CAA 90 bp GCAGGAAGAGGGTCATGGCCATTTAAGCATTTTCAAAGGCAAAGCACAAGAATCCCAAATGACAGCGGTTaGTCCCGATTTGTGATATCA +
Preference number: 5 (lower is better)
Translates to: AGRGSWPFKHFQRQSTRIPNDSG*SRFVIS
Trigger: TGATATCACAAATCGGGACAAACCGCTGTCATTTGG...GATTCTTGTGCTTTGCCTTTGAAAATGCTTAAATGGCCATGACCCTCTTCCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR CAA 90 bp GCAGGAAGAGGGTCATGGCCATTTAAGCATTTTCAAAGGCAAAGCACAAGAATCACATGGAACCCAGTATaGATCAGTTGTCTGCATGCT +
Preference number: 5 (lower is better)
Translates to: AGRGSWPFKHFQRQSTRITWNPV*ISCLHA
Trigger: AGCATGCAGACAACTGATCAATACTGGGTTCCATGT...GATTCTTGTGCTTTGCCTTTGAAAATGCTTAAATGGCCATGACCCTCTTCCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR CAA 90 bp CCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATTGCTGTGTGAGAGGCACATCAGGTTaGAACTTCCTATATGGCAGA +
Preference number: 5 (lower is better)
Translates to: PKQVLEGSLGAVITYCCVRGTSG*NFLYGR
Trigger: TCTGCCATATAGGAAGTTCAAACCTGATGTGCCTCT...CACACAGCAATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CAA 90 bp GGTACAAAGGCTTCCAACAAATCTAGCAAATCCAGTGCAGAACTAAGAACACCCAGAGGCACATCAGGTTaGAACTTCCTATATGGCAGA +
Preference number: 5 (lower is better)
Translates to: GTKASNKSSKSSAELRTPRGTSG*NFLYGR
Trigger: TCTGCCATATAGGAAGTTCAAACCTGATGTGCCTCT...GGGTGTTCTTAGTTCTGCACTGGATTTGCTAGATTTGTTGGAAGCCTTTGTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR CAA 90 bp AACTTGGCTCCATGTGGAGATGAATTATGGGCAGCCTCTCCACCATTACAGAGATTAGACAGTTCCAAATaGAAGTGCATGGGTACCAAA +
Preference number: 5 (lower is better)
Translates to: NLAPCGDELWAASPPLQRLDSSK*KCMGTK
Trigger: TTTGGTACCCATGCACTTCAATTTGGAACTGTCTAA...TCTCTGTAATGGTGGAGAGGCTGCCCATAATTCATCTCCACATGGAGCCAAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CAA 90 bp CCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATTGCTGTGTGATGCAGAACCAGCAGTaGCATCCATGTAAGAAACCA +
Preference number: 5 (lower is better)
Translates to: PKQVLEGSLGAVITYCCVMQNQQ*HPCKKP
Trigger: TGGTTTCTTACATGGATGCAACTGCTGGTTCTGCAT...CACACAGCAATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CAA 90 bp AATCCTCAGTCTGATCAATTTCTAAGGGTTCAAGCAAAGGCTCCCATACACCAATGCCTCAGCCAAGGCTaGTTTAGCTGCCTGAAAATT +
Preference number: 5 (lower is better)
Translates to: NPQSDQFLRVQAKAPIHQCLSQG*FSCLKI
Trigger: AATTTTCAGGCAGCTAAACAAGCCTTGGCTGAGGCA...TTGGTGTATGGGAGCCTTTGCTTGAACCCTTAGAAATTGATCAGACTGAGGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493341.1
CDS-3UTR CAA 90 bp GAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGTTTTGGCAGCTGCCTGAACAGTaGCCTCAGCCAAGGCTTGTT +
Preference number: 5 (lower is better)
Translates to: EYRVLEIISVICFPNRFWQLPEQ*PQPRLV
Trigger: AACAAGCCTTGGCTGAGGCAACTGTTCAGGCAGCTG...CCAAAACCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CAA 90 bp CCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATTGCTGTGTGCATTCTGGAACTCCTTaGTGCGAGTTCTTTTACACC +
Preference number: 5 (lower is better)
Translates to: PKQVLEGSLGAVITYCCVHSGTP*CEFFYT
Trigger: GGTGTAAAAGAACTCGCACAAAGGAGTTCCAGAATG...CACACAGCAATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CAA 90 bp GGTACAAAGGCTTCCAACAAATCTAGCAAATCCAGTGCAGAACTAAGAACACCCCATTCTGGAACTCCTTaGTGCGAGTTCTTTTACACC +
Preference number: 5 (lower is better)
Translates to: GTKASNKSSKSSAELRTPHSGTP*CEFFYT
Trigger: GGTGTAAAAGAACTCGCACAAAGGAGTTCCAGAATG...GGGTGTTCTTAGTTCTGCACTGGATTTGCTAGATTTGTTGGAAGCCTTTGTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR CAA 90 bp GAACTAGAAACATTAAACTTGGCTCCATGTGGAGATGAATTATGGGCAGCCTCTACCACAACTGGGGCTTaGATGTTAATATCCAGTGCC +
Preference number: 5 (lower is better)
Translates to: ELETLNLAPCGDELWAASTTTGA*MLISSA
Trigger: GGCACTGGATATTAACATCAAAGCCCCAGTTGTGGT...AGAGGCTGCCCATAATTCATCTCCACATGGAGCCAAGTTTAATGTTTCTAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CAA 90 bp GAACTAGAAACATTAAACTTGGCTCCATGTGGAGATGAATTATGGGCAGCCTCTCACTGTATTGGTCTTTaGTTACAGCAGGTGAGGCAC +
Preference number: 5 (lower is better)
Translates to: ELETLNLAPCGDELWAASHCIGL*LQQVRH
Trigger: GTGCCTCACCTGCTGTAACAAAAGACCAATACAGTG...AGAGGCTGCCCATAATTCATCTCCACATGGAGCCAAGTTTAATGTTTCTAGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CAA 90 bp GCAGGAAGAGGGTCATGGCCATTTAAGCATTTTCAAAGGCAAAGCACAAGAATCACTAGTGGCACTGTATaGGTCTTTTGTTACAGCAGG +
Preference number: 5 (lower is better)
Translates to: AGRGSWPFKHFQRQSTRITSGTV*VFCYSR
Trigger: CCTGCTGTAACAAAAGACCAATACAGTGCCACTAGT...GATTCTTGTGCTTTGCCTTTGAAAATGCTTAAATGGCCATGACCCTCTTCCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR CAA 90 bp GGTACAAAGGCTTCCAACAAATCTAGCAAATCCAGTGCAGAACTAAGAACACCCATTTTGCCTTTTCTCTaGACTGGAAGAAACGGGCAG +
Preference number: 5 (lower is better)
Translates to: GTKASNKSSKSSAELRTPILPFL*TGRNGQ
Trigger: CTGCCCGTTTCTTCCAGTCAAGAGAAAAGGCAAAAT...GGGTGTTCTTAGTTCTGCACTGGATTTGCTAGATTTGTTGGAAGCCTTTGTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR CAA 90 bp GCTCTTGTCCCCTCTAGTCCCTTCCCCACACCATGGCTCAATTGTCTTTCTAAAAATTCCTTCACACATTaGATAGTTCTCATCTTCTGG +
Preference number: 5 (lower is better)
Translates to: ALVPSSPFPTPWLNCLSKNSFTH*IVLIFW
Trigger: CCAGAAGATGAGAACTATCAAATGTGTGAAGGAATT...TTTAGAAAGACAATTGAGCCATGGTGTGGGGAAGGGACTAGAGGGGACAAGAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000419472.1
CDS-3UTR CAA 90 bp ATGCTTCCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATTGCCCTTCTTCTTGGGCTTaGTTTCCCAAACCACATCAG +
Preference number: 5 (lower is better)
Translates to: MLPKQVLEGSLGAVITYCPSSWA*FPKPHQ
Trigger: CTGATGTGGTTTGGGAAACAAAGCCCAAGAAGAAGG...GCAATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGGAAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CAA 90 bp GCAGGAAGAGGGTCATGGCCATTTAAGCATTTTCAAAGGCAAAGCACAAGAATCAGCTGCTCCTCCTTTTaGAGCTCCTTTGATTGGTTT +
Preference number: 5 (lower is better)
Translates to: AGRGSWPFKHFQRQSTRISCSSF*SSFDWF
Trigger: AAACCAATCAAAGGAGCTCAAAAAGGAGGAGCAGCT...GATTCTTGTGCTTTGCCTTTGAAAATGCTTAAATGGCCATGACCCTCTTCCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR CAA 90 bp CAGGAAAGACAGGCACTATCCTTTCCATGTGGATTAGTCACAAGACCCACTCCTCTAGAAACATTAAACTaGGCTCCATGTGGAGATGAA +
Preference number: 5 (lower is better)
Translates to: QERQALSFPCGLVTRPTPLETLN*APCGDE
Trigger: TTCATCTCCACATGGAGCCAAGTTTAATGTTTCTAG...AGGAGTGGGTCTTGTGACTAATCCACATGGAAAGGATAGTGCCTGTCTTTCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS-3UTR CAA 90 bp GACACTACACCCAGGGAGGCAGGGGACTGTAATTTTTCTGAGAATGGTGAAATCTTGACTAAGTCTGTATaGAGTCCTGCATACAGAATG +
Preference number: 5 (lower is better)
Translates to: DTTPREAGDCNFSENGEILTKSV*SPAYRM
Trigger: CATTCTGTATGCAGGACTCAATACAGACTTAGTCAA...GATTTCACCATTCTCAGAAAAATTACAGTCCCCTGCCTCCCTGGGTGTAGTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS TCA 90 bp GATGAATTCCGTCTGCTTTGTACTGTAACATGCGGCCAGTTTTATTaGCCATCCAATAAGGACTATGAAATGCCACAACTGTCTGACCAG +
Preference number: 5 (lower is better)
Translates to: DEFRLLCTVTCGQFY*PSNKDYEMPQLSDQ
Trigger: CTGGTCAGACAGTTGTGGCATTTCATAGTCCTTATTGGATGGTCAATAAAACTGGCCGCATGTTACAGTACAAAGCAGACGGAATTCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360280.8
ENST00000376636.7
ENST00000643348.1
ENST00000645632.1
CDS CCA 90 bp AAATCTATAGGCATCATCATATCATCCTTCTGTGTTACTTCACCATaGCTTTTTCTACATCTCCACTTCAGCCTTCTAGAGCCCACCGGA +
Preference number: 5 (lower is better)
Translates to: KSIGIIISSFCVTSP*LFLHLHFSLLEPTG
Trigger: TCCGGTGGGCTCTAGAAGGCTGAAGTGGAGATGTAGAAAAAGCCATGGTGAAGTAACACAGAAGGATGATATGATGATGCCTATAGATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355766.5
ENST00000360280.8
ENST00000376636.7
ENST00000643348.1
ENST00000645632.1
CDS-3UTR CAA 90 bp CCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATTGCTGTGTGTCTTTTCAGTTCCTGTaGCTTTGCTTCCATGAGTTG +
Preference number: 5 (lower is better)
Translates to: PKQVLEGSLGAVITYCCVSFQFL*LCFHEL
Trigger: CAACTCATGGAAGCAAAGCAACAGGAACTGAAAAGA...CACACAGCAATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CAA 90 bp AACTTGGCTCCATGTGGAGATGAATTATGGGCAGCCTCTCCACCATTACAGAGATTTTTCCGGCAGATGTaGTTCTTGATCAACTACTTT +
Preference number: 5 (lower is better)
Translates to: NLAPCGDELWAASPPLQRFFRQM*FLINYF
Trigger: AAAGTAGTTGATCAAGAACAACATCTGCCGGAAAAA...TCTCTGTAATGGTGGAGAGGCTGCCCATAATTCATCTCCACATGGAGCCAAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CAA 90 bp ATGCTTCCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATTGCCCAAATGACAGCGGTTaGTCCCGATTTGTGATATCA +
Preference number: 5 (lower is better)
Translates to: MLPKQVLEGSLGAVITYCPNDSG*SRFVIS
Trigger: TGATATCACAAATCGGGACAAACCGCTGTCATTTGG...GCAATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGGAAGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CAA 90 bp GCAGGAAGAGGGTCATGGCCATTTAAGCATTTTCAAAGGCAAAGCACAAGAATCCCCAGTATTGATCAGTaGTCTGCATGCTCAGATTTT +
Preference number: 5 (lower is better)
Translates to: AGRGSWPFKHFQRQSTRIPSIDQ*SACSDF
Trigger: AAAATCTGAGCATGCAGACAACTGATCAATACTGGG...GATTCTTGTGCTTTGCCTTTGAAAATGCTTAAATGGCCATGACCCTCTTCCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR CAA 90 bp GGTACAAAGGCTTCCAACAAATCTAGCAAATCCAGTGCAGAACTAAGAACACCCCGATTCATCACAAGTTaGGCATTAGCAGATATGGGA +
Preference number: 5 (lower is better)
Translates to: GTKASNKSSKSSAELRTPRFITS*ALADMG
Trigger: TCCCATATCTGCTAATGCCAAACTTGTGATGAATCG...GGGTGTTCTTAGTTCTGCACTGGATTTGCTAGATTTGTTGGAAGCCTTTGTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR CAA 90 bp GGTACAAAGGCTTCCAACAAATCTAGCAAATCCAGTGCAGAACTAAGAACACCCTTCAAGAGTTTCAGGTaGAACATCTGGTTGCTGTTC +
Preference number: 5 (lower is better)
Translates to: GTKASNKSSKSSAELRTPFKSFR*NIWLLF
Trigger: GAACAGCAACCAGATGTTCAACCTGAAACTCTTGAA...GGGTGTTCTTAGTTCTGCACTGGATTTGCTAGATTTGTTGGAAGCCTTTGTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR CAA 90 bp GATTTTAGGGTACATAAACTTTATATGAGAGGGACTGTCTGTTGGAAGCATAATCAGCTGCCTGAACAGTaGCCTCAGCCAAGGCTTGTT +
Preference number: 5 (lower is better)
Translates to: DFRVHKLYMRGTVCWKHNQLPEQ*PQPRLV
Trigger: AACAAGCCTTGGCTGAGGCAACTGTTCAGGCAGCTG...ATTATGCTTCCAACAGACAGTCCCTCTCATATAAAGTTTATGTACCCTAAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CAA 90 bp GAAAGACATTTGCAACAGTCTGCAGAAATTCTACGCTTGCACAAATATACATTTCAGCTGCCTGAACAGTaGCCTCAGCCAAGGCTTGTT +
Preference number: 5 (lower is better)
Translates to: ERHLQQSAEILRLHKYTFQLPEQ*PQPRLV
Trigger: AACAAGCCTTGGCTGAGGCAACTGTTCAGGCAGCTG...AAATGTATATTTGTGCAAGCGTAGAATTTCTGCAGACTGTTGCAAATGTCTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493341.1
CDS-3UTR CAA 90 bp GACACTACACCCAGGGAGGCAGGGGACTGTAATTTTTCTGAGAATGGTGAAATCACAAATATACATTTCTaGAAAGACCGCATCAGTCAC +
Preference number: 5 (lower is better)
Translates to: DTTPREAGDCNFSENGEITNIHF*KDRISH
Trigger: GTGACTGATGCGGTCTTTCAAGAAATGTATATTTGT...GATTTCACCATTCTCAGAAAAATTACAGTCCCCTGCCTCCCTGGGTGTAGTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS-3UTR CAA 90 bp TGTAATATGCTTCCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTCTTAGCAGTCCATGTTaGCACACTGGTTTCTACAGC +
Preference number: 5 (lower is better)
Translates to: CNMLPKQVLEGSLGAVITLSSPC*HTGFYS
Trigger: GCTGTAGAAACCAGTGTGCAAACATGGACTGCTAAG...AGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGGAAGCATATTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CAA 90 bp AAAGACATTTGCAACAGTCTGCAGAAATTCTACGCTTGCACAAATATACATTTCCGGGCAGGCTCTCACTaGGAGATCTTTAATGGCAGC +
Preference number: 5 (lower is better)
Translates to: KDICNSLQKFYACTNIHFRAGSH*EIFNGS
Trigger: GCTGCCATTAAAGATCTCCAAGTGAGAGCCTGCCCG...GAAATGTATATTTGTGCAAGCGTAGAATTTCTGCAGACTGTTGCAAATGTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493341.1
CDS-3UTR CAA 90 bp CCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATTGCTGTGTGAGAATGAAGAAGAGTTaGCTGCTTAGGCTGGTCATT +
Preference number: 5 (lower is better)
Translates to: PKQVLEGSLGAVITYCCVRMKKS*LLRLVI
Trigger: AATGACCAGCCTAAGCAGCAAACTCTTCTTCATTCT...CACACAGCAATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CAA 90 bp AAATGGCAACCCTGTGTCTGGGAGGCACTGTACCAAATCCTTTACATACACAATAGAATGAAGAAGAGTTaGCTGCTTAGGCTGGTCATT +
Preference number: 5 (lower is better)
Translates to: KWQPCVWEALYQILYIHNRMKKS*LLRLVI
Trigger: AATGACCAGCCTAAGCAGCAAACTCTTCTTCATTCT...ATTGTGTATGTAAAGGATTTGGTACAGTGCCTCCCAGACACAGGGTTGCCATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419472.1
CDS-3UTR CAA 90 bp GGTACAAAGGCTTCCAACAAATCTAGCAAATCCAGTGCAGAACTAAGAACACCCAGAATGAAGAAGAGTTaGCTGCTTAGGCTGGTCATT +
Preference number: 5 (lower is better)
Translates to: GTKASNKSSKSSAELRTPRMKKS*LLRLVI
Trigger: AATGACCAGCCTAAGCAGCAAACTCTTCTTCATTCT...GGGTGTTCTTAGTTCTGCACTGGATTTGCTAGATTTGTTGGAAGCCTTTGTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR CAA 90 bp AAATGGCAACCCTGTGTCTGGGAGGCACTGTACCAAATCCTTTACATACACAATGACGTCGTCCCACTTTaGTTAAAGGAATCTTATCAG +
Preference number: 5 (lower is better)
Translates to: KWQPCVWEALYQILYIHNDVVPL*LKESYQ
Trigger: CTGATAAGATTCCTTTAACAAAAGTGGGACGACGTC...ATTGTGTATGTAAAGGATTTGGTACAGTGCCTCCCAGACACAGGGTTGCCATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419472.1
CDS-3UTR CAA 90 bp GCAGGAAGAGGGTCATGGCCATTTAAGCATTTTCAAAGGCAAAGCACAAGAATCGACGTCGTCCCACTTTaGTTAAAGGAATCTTATCAG +
Preference number: 5 (lower is better)
Translates to: AGRGSWPFKHFQRQSTRIDVVPL*LKESYQ
Trigger: CTGATAAGATTCCTTTAACAAAAGTGGGACGACGTC...GATTCTTGTGCTTTGCCTTTGAAAATGCTTAAATGGCCATGACCCTCTTCCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR CAA 90 bp GGTACAAAGGCTTCCAACAAATCTAGCAAATCCAGTGCAGAACTAAGAACACCCTATAGTGACACCAACTaGATAGTCCATTTTCAGGCC +
Preference number: 5 (lower is better)
Translates to: GTKASNKSSKSSAELRTPYSDTN*IVHFQA
Trigger: GGCCTGAAAATGGACTATCAAGTTGGTGTCACTATA...GGGTGTTCTTAGTTCTGCACTGGATTTGCTAGATTTGTTGGAAGCCTTTGTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR CAA 90 bp AGCGAGGGTTTAAGGAGCCTGAGAAGAATTTCACAACTATTGACTATACAGAGTCCTTCTTCTTGGGCTTaGTTTCCCAAACCACATCAG +
Preference number: 5 (lower is better)
Translates to: SEGLRSLRRISQLLTIQSPSSWA*FPKPHQ
Trigger: CTGATGTGGTTTGGGAAACAAAGCCCAAGAAGAAGG...ACTCTGTATAGTCAATAGTTGTGAAATTCTTCTCAGGCTCCTTAAACCCTCGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CAA 90 bp CCAGAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGTTTATAGCACCGGTGATTTaGGAGGCAGCACCAGCCAAT +
Preference number: 5 (lower is better)
Translates to: PEYRVLEIISVICFPNRFIAPVI*EAAPAN
Trigger: ATTGGCTGGTGCTGCCTCCAAAATCACCGGTGCTAT...AAACCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTCTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CAA 90 bp GGTACAAAGGCTTCCAACAAATCTAGCAAATCCAGTGCAGAACTAAGAACACCCTCTAAAACCAGCTGGTaGCTTATTCATGGCTTCTCT +
Preference number: 5 (lower is better)
Translates to: GTKASNKSSKSSAELRTPSKTSW*LIHGFS
Trigger: AGAGAAGCCATGAATAAGCAACCAGCTGGTTTTAGA...GGGTGTTCTTAGTTCTGCACTGGATTTGCTAGATTTGTTGGAAGCCTTTGTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR CAA 90 bp AAGCGTGACTCTCATTTGAATAACTGTAGAGTAAGCAAACCAGAAATTCTCAATTGCCTCCAGTTGGCCTaGCTACCGCTCCTACTAAAC +
Preference number: 5 (lower is better)
Translates to: KRDSHLNNCRVSKPEILNCLQLA*LPLLLN
Trigger: GTTTAGTAGGAGCGGTAGCAAGGCCAACTGGAGGCA...ATTGAGAATTTCTGGTTTGCTTACTCTACAGTTATTCAAATGAGAGTCACGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CAA 90 bp GAACTAGAAACATTAAACTTGGCTCCATGTGGAGATGAATTATGGGCAGCCTCTACTTCACTCGTTCCTTaGCTTCAATGCGCAATCTTC +
Preference number: 5 (lower is better)
Translates to: ELETLNLAPCGDELWAASTSLVP*LQCAIF
Trigger: GAAGATTGCGCATTGAAGCAAAGGAACGAGTGAAGT...AGAGGCTGCCCATAATTCATCTCCACATGGAGCCAAGTTTAATGTTTCTAGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CAA 90 bp CCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATTGCTGTGTGCCACTGTCAATGTATTaGGTACACACTTTGAGCTTC +
Preference number: 5 (lower is better)
Translates to: PKQVLEGSLGAVITYCCVPLSMY*VHTLSF
Trigger: GAAGCTCAAAGTGTGTACCAAATACATTGACAGTGG...CACACAGCAATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS-3UTR CAA 90 bp GACACTACACCCAGGGAGGCAGGGGACTGTAATTTTTCTGAGAATGGTGAAATCCCTAGCTTGATTAGGTaGCCATTAACAATAAGGTAT +
Preference number: 5 (lower is better)
Translates to: DTTPREAGDCNFSENGEIPSLIR*PLTIRY
Trigger: ATACCTTATTGTTAATGGCAACCTAATCAAGCTAGG...GATTTCACCATTCTCAGAAAAATTACAGTCCCCTGCCTCCCTGGGTGTAGTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS-3UTR CAA 90 bp ATGGTGAATCAGCCAAAAGGTAGATGGTGCAGATTCAACGGACTCAAAAGGACATGCTGGCCTTGCTTTTaGGATAGTCCTGAAACAAAT +
Preference number: 5 (lower is better)
Translates to: MVNQPKGRWCRFNGLKRTCWPCF*DSPETN
Trigger: ATTTGTTTCAGGACTATCCAAAAAGCAAGGCCAGCA...TGTCCTTTTGAGTCCGTTGAATCTGCACCATCTACCTTTTGGCTGATTCACCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS CCA 90 bp GCCTTAGACAGTTCCAAATTGAAGTGCATGGGTACCAAAATATGCTaGGTAGATACACTGAGTTTTCGTGCTTCTCTCCAATTATCACCA +
Preference number: 5 (lower is better)
Translates to: ALDSSKLKCMGTKIC*VDTLSFRASLQLSP
Trigger: TGGTGATAATTGGAGAGAAGCACGAAAACTCAGTGTATCTACCCAGCATATTTTGGTACCCATGCACTTCAATTTGGAACTGTCTAAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360280.8
ENST00000376636.7
ENST00000643348.1
ENST00000645632.1
CDS-3UTR CAA 90 bp CCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATTGCTGTGTGAAATGGTACATCCAGTaGACTCAGGGCATTTTCTTT +
Preference number: 5 (lower is better)
Translates to: PKQVLEGSLGAVITYCCVKWYIQ*TQGIFF
Trigger: AAAGAAAATGCCCTGAGTCAACTGGATGTACCATTT...CACACAGCAATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CAA 90 bp CAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATTGCTGTGTGTCTTCATTCAAGAGTTTCAGGTaGAACATCTGGTTGCTGTTC +
Preference number: 5 (lower is better)
Translates to: QVLEGSLGAVITYCCVSSFKSFR*NIWLLF
Trigger: GAACAGCAACCAGATGTTCAACCTGAAACTCTTGAA...TGAAGACACACAGCAATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CAA 90 bp GCAGGAAGAGGGTCATGGCCATTTAAGCATTTTCAAAGGCAAAGCACAAGAATCTTAGACAGTTCCAAATaGAAGTGCATGGGTACCAAA +
Preference number: 5 (lower is better)
Translates to: AGRGSWPFKHFQRQSTRILDSSK*KCMGTK
Trigger: TTTGGTACCCATGCACTTCAATTTGGAACTGTCTAA...GATTCTTGTGCTTTGCCTTTGAAAATGCTTAAATGGCCATGACCCTCTTCCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR CAA 90 bp AGCGAGGGTTTAAGGAGCCTGAGAAGAATTTCACAACTATTGACTATACAGAGTATGCAGAACCAGCAGTaGCATCCATGTAAGAAACCA +
Preference number: 5 (lower is better)
Translates to: SEGLRSLRRISQLLTIQSMQNQQ*HPCKKP
Trigger: TGGTTTCTTACATGGATGCAACTGCTGGTTCTGCAT...ACTCTGTATAGTCAATAGTTGTGAAATTCTTCTCAGGCTCCTTAAACCCTCGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CAA 90 bp CAATGTTCATTTTTATCATCTCGCCTTTGGGTACCAATTCAGTTGTGGGAGCTACATTCTGGAACTCCTTaGTGCGAGTTCTTTTACACC +
Preference number: 5 (lower is better)
Translates to: QCSFLSSRLWVPIQLWELHSGTP*CEFFYT
Trigger: GGTGTAAAAGAACTCGCACAAAGGAGTTCCAGAATG...TAGCTCCCACAACTGAATTGGTACCCAAAGGCGAGATGATAAAAATGAACATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493341.1
CDS-3UTR CAA 90 bp GAATCAATGTTCATTTTTATCATCTCGCCTTTGGGTACCAATTCAGTTGTGGGAACCACAACTGGGGCTTaGATGTTAATATCCAGTGCC +
Preference number: 5 (lower is better)
Translates to: ESMFIFIISPLGTNSVVGTTTGA*MLISSA
Trigger: GGCACTGGATATTAACATCAAAGCCCCAGTTGTGGT...TCCCACAACTGAATTGGTACCCAAAGGCGAGATGATAAAAATGAACATTGATTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493341.1
CDS-3UTR CAA 90 bp GCAGGAAGAGGGTCATGGCCATTTAAGCATTTTCAAAGGCAAAGCACAAGAATCCCTCAAGAAAGACATTaGCAACAGTCTGCAGAAATT +
Preference number: 5 (lower is better)
Translates to: AGRGSWPFKHFQRQSTRIPQERH*QQSAEI
Trigger: AATTTCTGCAGACTGTTGCAAATGTCTTTCTTGAGG...GATTCTTGTGCTTTGCCTTTGAAAATGCTTAAATGGCCATGACCCTCTTCCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR CAA 90 bp GCAGGAAGAGGGTCATGGCCATTTAAGCATTTTCAAAGGCAAAGCACAAGAATCCTTAAAAACTACATCTaGTACATCTGTCAGTGTGGC +
Preference number: 5 (lower is better)
Translates to: AGRGSWPFKHFQRQSTRILKNYI*YICQCG
Trigger: GCCACACTGACAGATGTACAAGATGTAGTTTTTAAG...GATTCTTGTGCTTTGCCTTTGAAAATGCTTAAATGGCCATGACCCTCTTCCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR CAA 90 bp TTGTCTAAGCAGATTCTAACTTCAAACTGTCTATTGTTCCAGATGCTACTTTGTATAGCACCGGTGATTTaGGAGGCAGCACCAGCCAAT +
Preference number: 5 (lower is better)
Translates to: LSKQILTSNCLLFQMLLCIAPVI*EAAPAN
Trigger: ATTGGCTGGTGCTGCCTCCAAAATCACCGGTGCTAT...ACAAAGTAGCATCTGGAACAATAGACAGTTTGAAGTTAGAATCTGCTTAGACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR CAA 90 bp CATCCAGAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGATAACTCCATCTTCATaGAAGAACCGAGGAGGTCGC +
Preference number: 5 (lower is better)
Translates to: HPEYRVLEIISVICFPNRITPSS*KNRGGR
Trigger: GCGACCTCCTCGGTTCTTCAATGAAGATGGAGTTAT...CCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTCTGGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CAA 90 bp AGCGAGGGTTTAAGGAGCCTGAGAAGAATTTCACAACTATTGACTATACAGAGTACTTCACTCGTTCCTTaGCTTCAATGCGCAATCTTC +
Preference number: 5 (lower is better)
Translates to: SEGLRSLRRISQLLTIQSTSLVP*LQCAIF
Trigger: GAAGATTGCGCATTGAAGCAAAGGAACGAGTGAAGT...ACTCTGTATAGTCAATAGTTGTGAAATTCTTCTCAGGCTCCTTAAACCCTCGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CAA 90 bp AGCGAGGGTTTAAGGAGCCTGAGAAGAATTTCACAACTATTGACTATACAGAGTAGCTGTAATCACTTATaGCTGTGTGTCTTCAGGCAG +
Preference number: 5 (lower is better)
Translates to: SEGLRSLRRISQLLTIQSSCNHL*LCVFRQ
Trigger: CTGCCTGAAGACACACAGCAATAAGTGATTACAGCT...ACTCTGTATAGTCAATAGTTGTGAAATTCTTCTCAGGCTCCTTAAACCCTCGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CAA 90 bp CATCCAGAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGCTTCCCAAACAGGTTTaGGAAGGTAGTCTAGGAGCT +
Preference number: 5 (lower is better)
Translates to: HPEYRVLEIISVICFPNRLPKQV*EGSLGA
Trigger: AGCTCCTAGACTACCTTCCAAAACCTGTTTGGGAAG...CCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTCTGGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360280.8
ENST00000376636.7
ENST00000467124.1
CDS-3UTR CAA 90 bp AAGCGTGACTCTCATTTGAATAACTGTAGAGTAAGCAAACCAGAAATTCTCAATCCAAATGGACTAGGATaGTGGAGGAGAGGGGTAGGT +
Preference number: 5 (lower is better)
Translates to: KRDSHLNNCRVSKPEILNPNGLG*WRRGVG
Trigger: ACCTACCCCTCTCCTCCACAATCCTAGTCCATTTGG...ATTGAGAATTTCTGGTTTGCTTACTCTACAGTTATTCAAATGAGAGTCACGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS-3UTR CAA 90 bp CATCCAGAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGCAGACACTGAATATTTaGGCCCTACCAGAATGTGCC +
Preference number: 5 (lower is better)
Translates to: HPEYRVLEIISVICFPNRQTLNI*ALPECA
Trigger: GGCACATTCTGGTAGGGCCAAAATATTCAGTGTCTG...CCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTCTGGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS GCA 90 bp ATGGCCTTAGACAGTTCCAAATTGAAGTGCATGGGTACCAAAATATaGTGGGTAGATACACTGAGTTTTCGTGCTTCTCTCCAATTATCA +
Preference number: 5 (lower is better)
Translates to: MALDSSKLKCMGTKI*WVDTLSFRASLQLS
Trigger: TGATAATTGGAGAGAAGCACGAAAACTCAGTGTATCTACCCAGCATATTTTGGTACCCATGCACTTCAATTTGGAACTGTCTAAGGCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360280.8
ENST00000376636.7
ENST00000643348.1
ENST00000645632.1
CDS CCA 90 bp TCGTTCCTTTGCTTCAATGCGCAATCTTCTCCCATGAACAATGAATaGCTCTTTGGTAAATTCATCAAAACTATACTGCCACTCACACGT +
Preference number: 5 (lower is better)
Translates to: SFLCFNAQSSPMNNE*LFGKFIKTILPLTR
Trigger: ACGTGTGAGTGGCAGTATAGTTTTGATGAATTTACCAAAGAGCCATTCATTGTTCATGGGAGAAGATTGCGCATTGAAGCAAAGGAACGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360280.8
ENST00000376636.7
ENST00000376646.3
ENST00000484581.6
CDS-3UTR CAA 90 bp GCAGGAAGAGGGTCATGGCCATTTAAGCATTTTCAAAGGCAAAGCACAAGAATCCGGCAGATGTTGTTCTaGATCAACTACTTTTTGTTT +
Preference number: 5 (lower is better)
Translates to: AGRGSWPFKHFQRQSTRIRQMLF*INYFLF
Trigger: AAACAAAAAGTAGTTGATCAAGAACAACATCTGCCG...GATTCTTGTGCTTTGCCTTTGAAAATGCTTAAATGGCCATGACCCTCTTCCTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR CAA 90 bp CCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATTGCTGTGTGTTTTTCCGGCAGATGTaGTTCTTGATCAACTACTTT +
Preference number: 5 (lower is better)
Translates to: PKQVLEGSLGAVITYCCVFFRQM*FLINYF
Trigger: AAAGTAGTTGATCAAGAACAACATCTGCCGGAAAAA...CACACAGCAATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CAA 90 bp GCAGGAAGAGGGTCATGGCCATTTAAGCATTTTCAAAGGCAAAGCACAAGAATCTTTTTCCGGCAGATGTaGTTCTTGATCAACTACTTT +
Preference number: 5 (lower is better)
Translates to: AGRGSWPFKHFQRQSTRIFFRQM*FLINYF
Trigger: AAAGTAGTTGATCAAGAACAACATCTGCCGGAAAAA...GATTCTTGTGCTTTGCCTTTGAAAATGCTTAAATGGCCATGACCCTCTTCCTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR CAA 90 bp CATCCAGAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGCCAAATGACAGCGGTTaGTCCCGATTTGTGATATCA +
Preference number: 5 (lower is better)
Translates to: HPEYRVLEIISVICFPNRPNDSG*SRFVIS
Trigger: TGATATCACAAATCGGGACAAACCGCTGTCATTTGG...CCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTCTGGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CAA 90 bp CATCCAGAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGACATGGAACCCAGTATaGATCAGTTGTCTGCATGCT +
Preference number: 5 (lower is better)
Translates to: HPEYRVLEIISVICFPNRTWNPV*ISCLHA
Trigger: AGCATGCAGACAACTGATCAATACTGGGTTCCATGT...CCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTCTGGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CAA 90 bp TGTAATATGCTTCCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTCGATTCATCACAAGTTaGGCATTAGCAGATATGGGA +
Preference number: 5 (lower is better)
Translates to: CNMLPKQVLEGSLGAVITRFITS*ALADMG
Trigger: TCCCATATCTGCTAATGCCAAACTTGTGATGAATCG...AGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGGAAGCATATTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CAA 90 bp GGTACAAAGGCTTCCAACAAATCTAGCAAATCCAGTGCAGAACTAAGAACACCCTTTGGAAAAGTGACATaGCATCATCCAATGAAGACA +
Preference number: 5 (lower is better)
Translates to: GTKASNKSSKSSAELRTPFGKVT*HHPMKT
Trigger: TGTCTTCATTGGATGATGCAATGTCACTTTTCCAAA...GGGTGTTCTTAGTTCTGCACTGGATTTGCTAGATTTGTTGGAAGCCTTTGTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR CAA 90 bp ATGCTTCCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATTGCTATACAGTAGACCTGTaGCTGTCTTACTGCGAAATT +
Preference number: 5 (lower is better)
Translates to: MLPKQVLEGSLGAVITYCYTVDL*LSYCEI
Trigger: AATTTCGCAGTAAGACAGCAACAGGTCTACTGTATA...GCAATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGGAAGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CAA 90 bp GCAGGAAGAGGGTCATGGCCATTTAAGCATTTTCAAAGGCAAAGCACAAGAATCATTATCTCTTTAAGATaGGCCTCACCTTGTTTCACA +
Preference number: 5 (lower is better)
Translates to: AGRGSWPFKHFQRQSTRIIISLR*ASPCFT
Trigger: TGTGAAACAAGGTGAGGCCAATCTTAAAGAGATAAT...GATTCTTGTGCTTTGCCTTTGAAAATGCTTAAATGGCCATGACCCTCTTCCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR CAA 90 bp GAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGTTTTGGTGCCTCAGCCAAGGCTaGTTTAGCTGCCTGAAAATT +
Preference number: 5 (lower is better)
Translates to: EYRVLEIISVICFPNRFWCLSQG*FSCLKI
Trigger: AATTTTCAGGCAGCTAAACAAGCCTTGGCTGAGGCA...CCAAAACCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CAA 90 bp AATATGCTTCCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATCATTCTGGAACTCCTTaGTGCGAGTTCTTTTACACC +
Preference number: 5 (lower is better)
Translates to: NMLPKQVLEGSLGAVITYHSGTP*CEFFYT
Trigger: GGTGTAAAAGAACTCGCACAAAGGAGTTCCAGAATG...ATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGGAAGCATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CAA 90 bp GAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGTTTTGGACCACAACTGGGGCTTaGATGTTAATATCCAGTGCC +
Preference number: 5 (lower is better)
Translates to: EYRVLEIISVICFPNRFWTTTGA*MLISSA
Trigger: GGCACTGGATATTAACATCAAAGCCCCAGTTGTGGT...CCAAAACCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CAA 90 bp CCAGAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGTTTCACTGTATTGGTCTTTaGTTACAGCAGGTGAGGCAC +
Preference number: 5 (lower is better)
Translates to: PEYRVLEIISVICFPNRFHCIGL*LQQVRH
Trigger: GTGCCTCACCTGCTGTAACAAAAGACCAATACAGTG...AAACCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTCTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CAA 90 bp CATCCAGAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGACTAGTGGCACTGTATaGGTCTTTTGTTACAGCAGG +
Preference number: 5 (lower is better)
Translates to: HPEYRVLEIISVICFPNRTSGTV*VFCYSR
Trigger: CCTGCTGTAACAAAAGACCAATACAGTGCCACTAGT...CCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTCTGGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CAA 90 bp GAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGTTTTGGCTTAGCAGTCCATGTTaGCACACTGGTTTCTACAGC +
Preference number: 5 (lower is better)
Translates to: EYRVLEIISVICFPNRFWLSSPC*HTGFYS
Trigger: GCTGTAGAAACCAGTGTGCAAACATGGACTGCTAAG...CCAAAACCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CAA 90 bp CATCCAGAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGATTTTGCCTTTTCTCTaGACTGGAAGAAACGGGCAG +
Preference number: 5 (lower is better)
Translates to: HPEYRVLEIISVICFPNRILPFL*TGRNGQ
Trigger: CTGCCCGTTTCTTCCAGTCAAGAGAAAAGGCAAAAT...CCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTCTGGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CAA 90 bp TTAGTGTCAGGGATTTTACTGACATATCGATCACTTGTGGATCTGTACCTTTCTATTTTGCCTTTTCTCTaGACTGGAAGAAACGGGCAG +
Preference number: 5 (lower is better)
Translates to: LVSGILLTYRSLVDLYLSILPFL*TGRNGQ
Trigger: CTGCCCGTTTCTTCCAGTCAAGAGAAAAGGCAAAAT...AGAAAGGTACAGATCCACAAGTGATCGATATGTCAGTAAAATCCCTGACACTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000493341.1
CDS-3UTR CAA 90 bp AAACGGGCAGGCTCTCACTTGGAGATCTTTAATGGCAGCAGTCATTGTACTATTAAAACAGTAGTGATTTaGCCTTTTCTCTTGACTGGA +
Preference number: 5 (lower is better)
Translates to: KRAGSHLEIFNGSSHCTIKTVVI*PFLLTG
Trigger: TCCAGTCAAGAGAAAAGGCAAAATCACTACTGTTTT...AATAGTACAATGACTGCTGCCATTAAAGATCTCCAAGTGAGAGCCTGCCCGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493341.1
CDS-3UTR CAA 90 bp GCAGGAAGAGGGTCATGGCCATTTAAGCATTTTCAAAGGCAAAGCACAAGAATCAAAACAGTAGTGATTTaGCCTTTTCTCTTGACTGGA +
Preference number: 5 (lower is better)
Translates to: AGRGSWPFKHFQRQSTRIKTVVI*PFLLTG
Trigger: TCCAGTCAAGAGAAAAGGCAAAATCACTACTGTTTT...GATTCTTGTGCTTTGCCTTTGAAAATGCTTAAATGGCCATGACCCTCTTCCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR CAA 90 bp CTCCAAAAGAGACATGTATCAGAAAAGTGTAAACGGCTGGGTGTACTGGCTCATGCTTTCTTTTTCATCTaGATACCAAGATTCCATGGT +
Preference number: 5 (lower is better)
Translates to: LQKRHVSEKCKRLGVLAHAFFFI*IPRFHG
Trigger: ACCATGGAATCTTGGTATCAAGATGAAAAAGAAAGC...ATGAGCCAGTACACCCAGCCGTTTACACTTTTCTGATACATGTCTCTTTTGGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000419472.1
CDS-3UTR CAA 90 bp GCAGGAAGAGGGTCATGGCCATTTAAGCATTTTCAAAGGCAAAGCACAAGAATCGCTTTCTTTTTCATCTaGATACCAAGATTCCATGGT +
Preference number: 5 (lower is better)
Translates to: AGRGSWPFKHFQRQSTRIAFFFI*IPRFHG
Trigger: ACCATGGAATCTTGGTATCAAGATGAAAAAGAAAGC...GATTCTTGTGCTTTGCCTTTGAAAATGCTTAAATGGCCATGACCCTCTTCCTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR CAA 90 bp GGTACAAAGGCTTCCAACAAATCTAGCAAATCCAGTGCAGAACTAAGAACACCCAATTCCTTCACACATTaGATAGTTCTCATCTTCTGG +
Preference number: 5 (lower is better)
Translates to: GTKASNKSSKSSAELRTPNSFTH*IVLIFW
Trigger: CCAGAAGATGAGAACTATCAAATGTGTGAAGGAATT...GGGTGTTCTTAGTTCTGCACTGGATTTGCTAGATTTGTTGGAAGCCTTTGTACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR CAA 90 bp GGTACAAAGGCTTCCAACAAATCTAGCAAATCCAGTGCAGAACTAAGAACACCCGACAAAACTAATGTCTaGCTGATTAGGCTTTATGTG +
Preference number: 5 (lower is better)
Translates to: GTKASNKSSKSSAELRTPDKTNV*LIRLYV
Trigger: CACATAAAGCCTAATCAGCAAGACATTAGTTTTGTC...GGGTGTTCTTAGTTCTGCACTGGATTTGCTAGATTTGTTGGAAGCCTTTGTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR CAA 90 bp GCAGGAAGAGGGTCATGGCCATTTAAGCATTTTCAAAGGCAAAGCACAAGAATCTATATAGGCTACTTCTaGCTTCGTGTAATTGTTGAC +
Preference number: 5 (lower is better)
Translates to: AGRGSWPFKHFQRQSTRIYIGYF*LRVIVD
Trigger: GTCAACAATTACACGAAGCAAGAAGTAGCCTATATA...GATTCTTGTGCTTTGCCTTTGAAAATGCTTAAATGGCCATGACCCTCTTCCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR CAA 90 bp CCAGAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGTTTCATCTTGCCTTCTTCTaGGGCTTTGTTTCCCAAACC +
Preference number: 5 (lower is better)
Translates to: PEYRVLEIISVICFPNRFHLAFF*GFVSQT
Trigger: GGTTTGGGAAACAAAGCCCAAGAAGAAGGCAAGATG...AAACCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTCTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CAA 90 bp GAACTAGAAACATTAAACTTGGCTCCATGTGGAGATGAATTATGGGCAGCCTCTCTTAAAAACTACATCTaGTACATCTGTCAGTGTGGC +
Preference number: 5 (lower is better)
Translates to: ELETLNLAPCGDELWAASLKNYI*YICQCG
Trigger: GCCACACTGACAGATGTACAAGATGTAGTTTTTAAG...AGAGGCTGCCCATAATTCATCTCCACATGGAGCCAAGTTTAATGTTTCTAGTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CAA 90 bp ATGCTTCCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATTGCCTTAAAAACTACATCTaGTACATCTGTCAGTGTGGC +
Preference number: 5 (lower is better)
Translates to: MLPKQVLEGSLGAVITYCLKNYI*YICQCG
Trigger: GCCACACTGACAGATGTACAAGATGTAGTTTTTAAG...GCAATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGGAAGCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CAA 90 bp AGCGAGGGTTTAAGGAGCCTGAGAAGAATTTCACAACTATTGACTATACAGAGTTCTAAAACCAGCTGGTaGCTTATTCATGGCTTCTCT +
Preference number: 5 (lower is better)
Translates to: SEGLRSLRRISQLLTIQSSKTSW*LIHGFS
Trigger: AGAGAAGCCATGAATAAGCAACCAGCTGGTTTTAGA...ACTCTGTATAGTCAATAGTTGTGAAATTCTTCTCAGGCTCCTTAAACCCTCGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CAA 90 bp GAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGTTTTGGCCACTCACACGTGAGTaGTCCAAATGTTCCCTTTGT +
Preference number: 5 (lower is better)
Translates to: EYRVLEIISVICFPNRFWPLTRE*SKCSLC
Trigger: ACAAAGGGAACATTTGGACAACTCACGTGTGAGTGG...CCAAAACCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CAA 90 bp GGACTGTCTGTTGGAAGCATAATACACTATCTAAGATGTTGGGAATTGTGTTTACCACTCACACGTGAGTaGTCCAAATGTTCCCTTTGT +
Preference number: 5 (lower is better)
Translates to: GLSVGSIIHYLRCWELCLPLTRE*SKCSLC
Trigger: ACAAAGGGAACATTTGGACAACTCACGTGTGAGTGG...TAAACACAATTCCCAACATCTTAGATAGTGTATTATGCTTCCAACAGACAGTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CAA 90 bp GAACTAGAAACATTAAACTTGGCTCCATGTGGAGATGAATTATGGGCAGCCTCTGAAATTCTCAATCTATaGGCAACGGGACAGGTTATT +
Preference number: 5 (lower is better)
Translates to: ELETLNLAPCGDELWAASEILNL*ATGQVI
Trigger: AATAACCTGTCCCGTTGCCAATAGATTGAGAATTTC...AGAGGCTGCCCATAATTCATCTCCACATGGAGCCAAGTTTAATGTTTCTAGTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CAA 90 bp ATGCTTCCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATTGCTATTTGGTACACACTTaGAGCTTCTACAGGCAAACT +
Preference number: 5 (lower is better)
Translates to: MLPKQVLEGSLGAVITYCYLVHT*SFYRQT
Trigger: AGTTTGCCTGTAGAAGCTCAAAGTGTGTACCAAATA...GCAATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGGAAGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS-3UTR CAA 90 bp AAACTTTATATGAGAGGGACTGTCTGTTGGAAGCATAATACACTATCTAAGATGCTGAATCATGTGAGGTaGCCCGATACACAGCAGAGA +
Preference number: 5 (lower is better)
Translates to: KLYMRGTVCWKHNTLSKMLNHVR*PDTQQR
Trigger: TCTCTGCTGTGTATCGGGCAACCTCACATGATTCAG...CATCTTAGATAGTGTATTATGCTTCCAACAGACAGTCCCTCTCATATAAAGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS-3UTR CAA 90 bp GGACTGTCTGTTGGAAGCATAATACACTATCTAAGATGTTGGGAATTGTGTTTAAGACTATGGCCTTTTTaGGGTGCTGTGTGTGGATCT +
Preference number: 5 (lower is better)
Translates to: GLSVGSIIHYLRCWELCLRLWPF*GAVCGS
Trigger: AGATCCACACACAGCACCCAAAAAAGGCCATAGTCT...TAAACACAATTCCCAACATCTTAGATAGTGTATTATGCTTCCAACAGACAGTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS TCA 90 bp ACAGACTTCACTCGTTCCTTTGCTTCAATGCGCAATCTTCTCCCATaGACAATGAATGGCTCTTTGGTAAATTCATCAAAACTATACTGC +
Preference number: 5 (lower is better)
Translates to: TDFTRSFASMRNLLP*TMNGSLVNSSKLYC
Trigger: GCAGTATAGTTTTGATGAATTTACCAAAGAGCCATTCATTGTTCATGGGAGAAGATTGCGCATTGAAGCAAAGGAACGAGTGAAGTCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360280.8
ENST00000376636.7
ENST00000376646.3
ENST00000484581.6
CDS-3UTR CAA 90 bp TGTAATATGCTTCCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTAAATGGTACATCCAGTaGACTCAGGGCATTTTCTTT +
Preference number: 5 (lower is better)
Translates to: CNMLPKQVLEGSLGAVITKWYIQ*TQGIFF
Trigger: AAAGAAAATGCCCTGAGTCAACTGGATGTACCATTT...AGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGGAAGCATATTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CAA 90 bp CATCCAGAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGTCTTTTCAGTTCCTGTaGCTTTGCTTCCATGAGTTG +
Preference number: 5 (lower is better)
Translates to: HPEYRVLEIISVICFPNRSFQFL*LCFHEL
Trigger: CAACTCATGGAAGCAAAGCAACAGGAACTGAAAAGA...CCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTCTGGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CAA 90 bp GAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGTTTTGGACATGGAACCCAGTATaGATCAGTTGTCTGCATGCT +
Preference number: 5 (lower is better)
Translates to: EYRVLEIISVICFPNRFWTWNPV*ISCLHA
Trigger: AGCATGCAGACAACTGATCAATACTGGGTTCCATGT...CCAAAACCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CAA 90 bp GAACTAGAAACATTAAACTTGGCTCCATGTGGAGATGAATTATGGGCAGCCTCTTTTGGAAAAGTGACATaGCATCATCCAATGAAGACA +
Preference number: 5 (lower is better)
Translates to: ELETLNLAPCGDELWAASFGKVT*HHPMKT
Trigger: TGTCTTCATTGGATGATGCAATGTCACTTTTCCAAA...AGAGGCTGCCCATAATTCATCTCCACATGGAGCCAAGTTTAATGTTTCTAGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CAA 90 bp ATGCTTCCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATTGCTTTGGAAAAGTGACATaGCATCATCCAATGAAGACA +
Preference number: 5 (lower is better)
Translates to: MLPKQVLEGSLGAVITYCFGKVT*HHPMKT
Trigger: TGTCTTCATTGGATGATGCAATGTCACTTTTCCAAA...GCAATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGGAAGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CAA 90 bp GAACTAGAAACATTAAACTTGGCTCCATGTGGAGATGAATTATGGGCAGCCTCTATTATCTCTTTAAGATaGGCCTCACCTTGTTTCACA +
Preference number: 5 (lower is better)
Translates to: ELETLNLAPCGDELWAASIISLR*ASPCFT
Trigger: TGTGAAACAAGGTGAGGCCAATCTTAAAGAGATAAT...AGAGGCTGCCCATAATTCATCTCCACATGGAGCCAAGTTTAATGTTTCTAGTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CAA 90 bp TTGTCTAAGCAGATTCTAACTTCAAACTGTCTATTGTTCCAGATGCTACTTTGTACCACAACTGGGGCTTaGATGTTAATATCCAGTGCC +
Preference number: 5 (lower is better)
Translates to: LSKQILTSNCLLFQMLLCTTTGA*MLISSA
Trigger: GGCACTGGATATTAACATCAAAGCCCCAGTTGTGGT...ACAAAGTAGCATCTGGAACAATAGACAGTTTGAAGTTAGAATCTGCTTAGACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR CAA 90 bp GAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGTTTTGGACTAGTGGCACTGTATaGGTCTTTTGTTACAGCAGG +
Preference number: 5 (lower is better)
Translates to: EYRVLEIISVICFPNRFWTSGTV*VFCYSR
Trigger: CCTGCTGTAACAAAAGACCAATACAGTGCCACTAGT...CCAAAACCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CAA 90 bp GAACTAGAAACATTAAACTTGGCTCCATGTGGAGATGAATTATGGGCAGCCTCTTCCATCATGTCTTTTTaGTCAAAACCAACTGTCAGT +
Preference number: 5 (lower is better)
Translates to: ELETLNLAPCGDELWAASSIMSF*SKPTVS
Trigger: ACTGACAGTTGGTTTTGACAAAAAAGACATGATGGA...AGAGGCTGCCCATAATTCATCTCCACATGGAGCCAAGTTTAATGTTTCTAGTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CAA 90 bp TTGAAAGACCGCATCAGTCACACAACCATCTCTGACTTTCCTGTACTTTATATCCCTCAAGAAAGACATTaGCAACAGTCTGCAGAAATT +
Preference number: 5 (lower is better)
Translates to: LKDRISHTTISDFPVLYIPQERH*QQSAEI
Trigger: AATTTCTGCAGACTGTTGCAAATGTCTTTCTTGAGG...GATATAAAGTACAGGAAAGTCAGAGATGGTTGTGTGACTGATGCGGTCTTTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493341.1
CDS-3UTR CAA 90 bp AGACATTTGCAACAGTCTGCAGAAATTCTACGCTTGCACAAATATACATTTCTTCTTAGCAGTCCATGTTaGCACACTGGTTTCTACAGC +
Preference number: 5 (lower is better)
Translates to: RHLQQSAEILRLHKYTFLLSSPC*HTGFYS
Trigger: GCTGTAGAAACCAGTGTGCAAACATGGACTGCTAAG...AAGAAATGTATATTTGTGCAAGCGTAGAATTTCTGCAGACTGTTGCAAATGTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493341.1
CDS-3UTR CAA 90 bp GAACTAGAAACATTAAACTTGGCTCCATGTGGAGATGAATTATGGGCAGCCTCTAAAACAGTAGTGATTTaGCCTTTTCTCTTGACTGGA +
Preference number: 5 (lower is better)
Translates to: ELETLNLAPCGDELWAASKTVVI*PFLLTG
Trigger: TCCAGTCAAGAGAAAAGGCAAAATCACTACTGTTTT...AGAGGCTGCCCATAATTCATCTCCACATGGAGCCAAGTTTAATGTTTCTAGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CAA 90 bp CAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATTGCTGTGTGTCTTCAAAAACAGTAGTGATTTaGCCTTTTCTCTTGACTGGA +
Preference number: 5 (lower is better)
Translates to: QVLEGSLGAVITYCCVSSKTVVI*PFLLTG
Trigger: TCCAGTCAAGAGAAAAGGCAAAATCACTACTGTTTT...TGAAGACACACAGCAATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CAA 90 bp ATGCTTCCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATTGCAATTCCTTCACACATTaGATAGTTCTCATCTTCTGG +
Preference number: 5 (lower is better)
Translates to: MLPKQVLEGSLGAVITYCNSFTH*IVLIFW
Trigger: CCAGAAGATGAGAACTATCAAATGTGTGAAGGAATT...GCAATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGGAAGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CAA 90 bp CAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATTGCTGTGTGTCTTCATATATAGGCTACTTCTaGCTTCGTGTAATTGTTGAC +
Preference number: 5 (lower is better)
Translates to: QVLEGSLGAVITYCCVSSYIGYF*LRVIVD
Trigger: GTCAACAATTACACGAAGCAAGAAGTAGCCTATATA...TGAAGACACACAGCAATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CAA 90 bp TTGTCTAAGCAGATTCTAACTTCAAACTGTCTATTGTTCCAGATGCTACTTTGTCCTTCTTCTTGGGCTTaGTTTCCCAAACCACATCAG +
Preference number: 5 (lower is better)
Translates to: LSKQILTSNCLLFQMLLCPSSWA*FPKPHQ
Trigger: CTGATGTGGTTTGGGAAACAAAGCCCAAGAAGAAGG...ACAAAGTAGCATCTGGAACAATAGACAGTTTGAAGTTAGAATCTGCTTAGACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR CAA 90 bp AATATGCTTCCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATTCTAAAACCAGCTGGTaGCTTATTCATGGCTTCTCT +
Preference number: 5 (lower is better)
Translates to: NMLPKQVLEGSLGAVITYSKTSW*LIHGFS
Trigger: AGAGAAGCCATGAATAAGCAACCAGCTGGTTTTAGA...ATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGGAAGCATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CAA 90 bp TTGTCTAAGCAGATTCTAACTTCAAACTGTCTATTGTTCCAGATGCTACTTTGTATAACTCCATCTTCATaGAAGAACCGAGGAGGTCGC +
Preference number: 5 (lower is better)
Translates to: LSKQILTSNCLLFQMLLCITPSS*KNRGGR
Trigger: GCGACCTCCTCGGTTCTTCAATGAAGATGGAGTTAT...ACAAAGTAGCATCTGGAACAATAGACAGTTTGAAGTTAGAATCTGCTTAGACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR CAA 90 bp GAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGTTTTGGAGCTGTAATCACTTATaGCTGTGTGTCTTCAGGCAG +
Preference number: 5 (lower is better)
Translates to: EYRVLEIISVICFPNRFWSCNHL*LCVFRQ
Trigger: CTGCCTGAAGACACACAGCAATAAGTGATTACAGCT...CCAAAACCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360280.8
ENST00000376636.7
ENST00000467124.1
CDS-3UTR CAA 90 bp AAACTTTATATGAGAGGGACTGTCTGTTGGAAGCATAATACACTATCTAAGATGCTTCCCAAACAGGTTTaGGAAGGTAGTCTAGGAGCT +
Preference number: 5 (lower is better)
Translates to: KLYMRGTVCWKHNTLSKMLPKQV*EGSLGA
Trigger: AGCTCCTAGACTACCTTCCAAAACCTGTTTGGGAAG...CATCTTAGATAGTGTATTATGCTTCCAACAGACAGTCCCTCTCATATAAAGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CAA 90 bp ATGCTTCCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATTGCTCTCATGAAATAGGCTaGAGGAAATATTTCAAAGGC +
Preference number: 5 (lower is better)
Translates to: MLPKQVLEGSLGAVITYCSHEIG*RKYFKG
Trigger: GCCTTTGAAATATTTCCTCAAGCCTATTTCATGAGA...GCAATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGGAAGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CAA 90 bp AGCGAGGGTTTAAGGAGCCTGAGAAGAATTTCACAACTATTGACTATACAGAGTAAGCGTGACTCTCATTaGAATAACTGTAGAGTAAGC +
Preference number: 5 (lower is better)
Translates to: SEGLRSLRRISQLLTIQSKRDSH*NNCRVS
Trigger: GCTTACTCTACAGTTATTCAAATGAGAGTCACGCTT...ACTCTGTATAGTCAATAGTTGTGAAATTCTTCTCAGGCTCCTTAAACCCTCGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CAA 90 bp TGTAATATGCTTCCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTACAGTTAATAGTAACTaGGTGGCACATACAACATGC +
Preference number: 5 (lower is better)
Translates to: CNMLPKQVLEGSLGAVITTVNSN*VAHTTC
Trigger: GCATGTTGTATGTGCCACCAAGTTACTATTAACTGT...AGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGGAAGCATATTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CAA 90 bp AAACTTTATATGAGAGGGACTGTCTGTTGGAAGCATAATACACTATCTAAGATGTCTAGACTTCCTGAGTaGTGGATCTGCTGCTCCTTA +
Preference number: 5 (lower is better)
Translates to: KLYMRGTVCWKHNTLSKMSRLPE*WICCSL
Trigger: TAAGGAGCAGCAGATCCACAACTCAGGAAGTCTAGA...CATCTTAGATAGTGTATTATGCTTCCAACAGACAGTCCCTCTCATATAAAGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS TCA 90 bp TTGATCAGTTGTCTGCATGCTCAGATTTTGAAGGGAAATACCAAATaGCAGCGGTTTGTCCCGATTTGTGATATCATCTTCATAACGAAT +
Preference number: 5 (lower is better)
Translates to: LISCLHAQILKGNTK*QRFVPICDIIFITN
Trigger: ATTCGTTATGAAGATGATATCACAAATCGGGACAAACCGCTGTCATTTGGTATTTCCCTTCAAAATCTGAGCATGCAGACAACTGATCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360280.8
ENST00000376636.7
ENST00000643348.1
ENST00000645632.1
CDS TCA 90 bp AACAGCTTATTCCTGCATGCTCAGATTTTGAAGGGAAATACCAAATaGCAGCGGTTTGTCCCGATTTGTGATATCATCTTCATAACGAAT +
Preference number: 5 (lower is better)
Translates to: NSLFLHAQILKGNTK*QRFVPICDIIFITN
Trigger: ATTCGTTATGAAGATGATATCACAAATCGGGACAAACCGCTGTCATTTGGTATTTCCCTTCAAAATCTGAGCATGCAGGAATAAGCTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471439.1
CDS GCA 90 bp GAAGATTCAGTATATTCCTTAAATTCTCTCTCTAACTTCTCAGTGTaGTTTACACTCATTGGCTTCCATCTTGCCTTCTTCTTGGGCTTT +
Preference number: 5 (lower is better)
Translates to: EDSVYSLNSLSNFSV*FTLIGFHLAFFLGF
Trigger: AAAGCCCAAGAAGAAGGCAAGATGGAAGCCAATGAGTGTAAAGCACACTGAGAAGTTAGAGAGAGAATTTAAGGAATATACTGAATCTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360280.8
ENST00000376636.7
ENST00000643348.1
ENST00000645632.1
CDS CCA 90 bp ACCACAACCTCAAGATTTAATGGCAGGAGTAGATCCAGTACTTCCTaGTATGCATCATTAATAAATCGAGATCTGTATAGTCGCATTTCA +
Preference number: 5 (lower is better)
Translates to: TTTSRFNGRSRSSTS*YASLINRDLYSRIS
Trigger: TGAAATGCGACTATACAGATCTCGATTTATTAATGATGCATACCAGGAAGTACTGGATCTACTCCTGCCATTAAATCTTGAGGTTGTGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360280.8
ENST00000376636.7
ENST00000423463.6
ENST00000493341.1
ENST00000643348.1
ENST00000645632.1
CDS-3UTR CAA 90 bp TGTAATATGCTTCCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTCGGCAGATGTTGTTCTaGATCAACTACTTTTTGTTT +
Preference number: 5 (lower is better)
Translates to: CNMLPKQVLEGSLGAVITRQMLF*INYFLF
Trigger: AAACAAAAAGTAGTTGATCAAGAACAACATCTGCCG...AGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGGAAGCATATTACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CAA 90 bp GGACTGTCTGTTGGAAGCATAATACACTATCTAAGATGTTGGGAATTGTGTTTACCCAGTATTGATCAGTaGTCTGCATGCTCAGATTTT +
Preference number: 5 (lower is better)
Translates to: GLSVGSIIHYLRCWELCLPSIDQ*SACSDF
Trigger: AAAATCTGAGCATGCAGACAACTGATCAATACTGGG...TAAACACAATTCCCAACATCTTAGATAGTGTATTATGCTTCCAACAGACAGTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CAA 90 bp CCAGAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGTTTCGATTCATCACAAGTTaGGCATTAGCAGATATGGGA +
Preference number: 5 (lower is better)
Translates to: PEYRVLEIISVICFPNRFRFITS*ALADMG
Trigger: TCCCATATCTGCTAATGCCAAACTTGTGATGAATCG...AAACCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTCTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CAA 90 bp GATTTTAGGGTACATAAACTTTATATGAGAGGGACTGTCTGTTGGAAGCATAATAGAGGCACATCAGGTTaGAACTTCCTATATGGCAGA +
Preference number: 5 (lower is better)
Translates to: DFRVHKLYMRGTVCWKHNRGTSG*NFLYGR
Trigger: TCTGCCATATAGGAAGTTCAAACCTGATGTGCCTCT...ATTATGCTTCCAACAGACAGTCCCTCTCATATAAAGTTTATGTACCCTAAAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CAA 90 bp AATATGCTTCCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATTTAGACAGTTCCAAATaGAAGTGCATGGGTACCAAA +
Preference number: 5 (lower is better)
Translates to: NMLPKQVLEGSLGAVITYLDSSK*KCMGTK
Trigger: TTTGGTACCCATGCACTTCAATTTGGAACTGTCTAA...ATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGGAAGCATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CAA 90 bp TTGTCTAAGCAGATTCTAACTTCAAACTGTCTATTGTTCCAGATGCTACTTTGTATGCAGAACCAGCAGTaGCATCCATGTAAGAAACCA +
Preference number: 5 (lower is better)
Translates to: LSKQILTSNCLLFQMLLCMQNQQ*HPCKKP
Trigger: TGGTTTCTTACATGGATGCAACTGCTGGTTCTGCAT...ACAAAGTAGCATCTGGAACAATAGACAGTTTGAAGTTAGAATCTGCTTAGACAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR CAA 90 bp CCAGAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGTTTTTTATCATCTCGCCTTaGGGTACCAATTCAGTTGTG +
Preference number: 5 (lower is better)
Translates to: PEYRVLEIISVICFPNRFFIISP*GTNSVV
Trigger: CACAACTGAATTGGTACCCAAAGGCGAGATGATAAA...AAACCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTCTGG
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CAA 90 bp CCAGAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGTTTAGAATGAAGAAGAGTTaGCTGCTTAGGCTGGTCATT +
Preference number: 5 (lower is better)
Translates to: PEYRVLEIISVICFPNRFRMKKS*LLRLVI
Trigger: AATGACCAGCCTAAGCAGCAAACTCTTCTTCATTCT...AAACCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTCTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CAA 90 bp GAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGTTTTGGGACGTCGTCCCACTTTaGTTAAAGGAATCTTATCAG +
Preference number: 5 (lower is better)
Translates to: EYRVLEIISVICFPNRFWDVVPL*LKESYQ
Trigger: CTGATAAGATTCCTTTAACAAAAGTGGGACGACGTC...CCAAAACCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CAA 90 bp GGACTGTCTGTTGGAAGCATAATACACTATCTAAGATGTTGGGAATTGTGTTTAGACGTCGTCCCACTTTaGTTAAAGGAATCTTATCAG +
Preference number: 5 (lower is better)
Translates to: GLSVGSIIHYLRCWELCLDVVPL*LKESYQ
Trigger: CTGATAAGATTCCTTTAACAAAAGTGGGACGACGTC...TAAACACAATTCCCAACATCTTAGATAGTGTATTATGCTTCCAACAGACAGTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CAA 90 bp TGTAATATGCTTCCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTGACAAAACTAATGTCTaGCTGATTAGGCTTTATGTG +
Preference number: 5 (lower is better)
Translates to: CNMLPKQVLEGSLGAVITDKTNV*LIRLYV
Trigger: CACATAAAGCCTAATCAGCAAGACATTAGTTTTGTC...AGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGGAAGCATATTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CAA 90 bp CCAGAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGTTTTATAGTGACACCAACTaGATAGTCCATTTTCAGGCC +
Preference number: 5 (lower is better)
Translates to: PEYRVLEIISVICFPNRFYSDTN*IVHFQA
Trigger: GGCCTGAAAATGGACTATCAAGTTGGTGTCACTATA...AAACCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTCTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CAA 90 bp GAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGTTTTGGTATAGTGACACCAACTaGATAGTCCATTTTCAGGCC +
Preference number: 5 (lower is better)
Translates to: EYRVLEIISVICFPNRFWYSDTN*IVHFQA
Trigger: GGCCTGAAAATGGACTATCAAGTTGGTGTCACTATA...CCAAAACCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CAA 90 bp GATTTTAGGGTACATAAACTTTATATGAGAGGGACTGTCTGTTGGAAGCATAATAGCTGCTCCTCCTTTTaGAGCTCCTTTGATTGGTTT +
Preference number: 5 (lower is better)
Translates to: DFRVHKLYMRGTVCWKHNSCSSF*SSFDWF
Trigger: AAACCAATCAAAGGAGCTCAAAAAGGAGGAGCAGCT...ATTATGCTTCCAACAGACAGTCCCTCTCATATAAAGTTTATGTACCCTAAAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CAA 90 bp AATATGCTTCCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATCTAGAAACATTAAACTaGGCTCCATGTGGAGATGAA +
Preference number: 5 (lower is better)
Translates to: NMLPKQVLEGSLGAVITYLETLN*APCGDE
Trigger: TTCATCTCCACATGGAGCCAAGTTTAATGTTTCTAG...ATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGGAAGCATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CAA 90 bp AATATGCTTCCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATACAGTTAATAGTAACTaGGTGGCACATACAACATGC +
Preference number: 5 (lower is better)
Translates to: NMLPKQVLEGSLGAVITYTVNSN*VAHTTC
Trigger: GCATGTTGTATGTGCCACCAAGTTACTATTAACTGT...ATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGGAAGCATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CAA 90 bp CCAGAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGTTTGGTTTCCTTTTAGAGTaGCGCTATACTGAAAAGCAC +
Preference number: 5 (lower is better)
Translates to: PEYRVLEIISVICFPNRFGFLLE*RYTEKH
Trigger: GTGCTTTTCAGTATAGCGCAACTCTAAAAGGAAACC...AAACCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTCTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS TCA 90 bp CAGGCCTTTACATTTAACAGCTCCATGACTACCAACAGTATCAATTaGAAACTGATTGGACAACTCACTATCAGTTACCATAAGTTGAAC +
Preference number: 5 (lower is better)
Translates to: QAFTFNSSMTTNSIN*KLIGQLTISYHKLN
Trigger: GTTCAACTTATGGTAACTGATAGTGAGTTGTCCAATCAGTTTTCAATTGATACTGTTGGTAGTCATGGAGCTGTTAAATGTAAAGGCCTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360280.8
ENST00000376636.7
ENST00000643348.1
ENST00000645632.1
CDS-3UTR CAA 90 bp AAGCGTGACTCTCATTTGAATAACTGTAGAGTAAGCAAACCAGAAATTCTCAATCCCAGTATTGATCAGTaGTCTGCATGCTCAGATTTT +
Preference number: 5 (lower is better)
Translates to: KRDSHLNNCRVSKPEILNPSIDQ*SACSDF
Trigger: AAAATCTGAGCATGCAGACAACTGATCAATACTGGG...ATTGAGAATTTCTGGTTTGCTTACTCTACAGTTATTCAAATGAGAGTCACGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CAA 90 bp AAACTTTATATGAGAGGGACTGTCTGTTGGAAGCATAATACACTATCTAAGATGTTCAAGAGTTTCAGGTaGAACATCTGGTTGCTGTTC +
Preference number: 5 (lower is better)
Translates to: KLYMRGTVCWKHNTLSKMFKSFR*NIWLLF
Trigger: GAACAGCAACCAGATGTTCAACCTGAAACTCTTGAA...CATCTTAGATAGTGTATTATGCTTCCAACAGACAGTCCCTCTCATATAAAGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CAA 90 bp AATATGCTTCCCAAACAGGTTTTGGAAGGTAGTCTAGGAGCTGTAATCACTTATTCCATCATGTCTTTTTaGTCAAAACCAACTGTCAGT +
Preference number: 5 (lower is better)
Translates to: NMLPKQVLEGSLGAVITYSIMSF*SKPTVS
Trigger: ACTGACAGTTGGTTTTGACAAAAAAGACATGATGGA...ATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGGAAGCATATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CAA 90 bp TTAGTGTCAGGGATTTTACTGACATATCGATCACTTGTGGATCTGTACCTTTCTACAAATATACATTTCTaGAAAGACCGCATCAGTCAC +
Preference number: 5 (lower is better)
Translates to: LVSGILLTYRSLVDLYLSTNIHF*KDRISH
Trigger: GTGACTGATGCGGTCTTTCAAGAAATGTATATTTGT...AGAAAGGTACAGATCCACAAGTGATCGATATGTCAGTAAAATCCCTGACACTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493341.1
CDS-3UTR CAA 90 bp GGACTGTCTGTTGGAAGCATAATACACTATCTAAGATGTTGGGAATTGTGTTTACCTCAAGAAAGACATTaGCAACAGTCTGCAGAAATT +
Preference number: 5 (lower is better)
Translates to: GLSVGSIIHYLRCWELCLPQERH*QQSAEI
Trigger: AATTTCTGCAGACTGTTGCAAATGTCTTTCTTGAGG...TAAACACAATTCCCAACATCTTAGATAGTGTATTATGCTTCCAACAGACAGTCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CAA 90 bp AAACTTTATATGAGAGGGACTGTCTGTTGGAAGCATAATACACTATCTAAGATGTTTATCATCTCGCCTTaGGGTACCAATTCAGTTGTG +
Preference number: 5 (lower is better)
Translates to: KLYMRGTVCWKHNTLSKMFIISP*GTNSVV
Trigger: CACAACTGAATTGGTACCCAAAGGCGAGATGATAAA...CATCTTAGATAGTGTATTATGCTTCCAACAGACAGTCCCTCTCATATAAAGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CAA 90 bp GAAAGACATTTGCAACAGTCTGCAGAAATTCTACGCTTGCACAAATATACATTTTTTATCATCTCGCCTTaGGGTACCAATTCAGTTGTG +
Preference number: 5 (lower is better)
Translates to: ERHLQQSAEILRLHKYTFFIISP*GTNSVV
Trigger: CACAACTGAATTGGTACCCAAAGGCGAGATGATAAA...AAATGTATATTTGTGCAAGCGTAGAATTTCTGCAGACTGTTGCAAATGTCTTTC
38% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000493341.1
CDS-3UTR CAA 90 bp TTGTCTAAGCAGATTCTAACTTCAAACTGTCTATTGTTCCAGATGCTACTTTGTTTTATCATCTCGCCTTaGGGTACCAATTCAGTTGTG +
Preference number: 5 (lower is better)
Translates to: LSKQILTSNCLLFQMLLCFIISP*GTNSVV
Trigger: CACAACTGAATTGGTACCCAAAGGCGAGATGATAAA...ACAAAGTAGCATCTGGAACAATAGACAGTTTGAAGTTAGAATCTGCTTAGACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR CAA 90 bp CATCCAGAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGGACAAAACTAATGTCTaGCTGATTAGGCTTTATGTG +
Preference number: 5 (lower is better)
Translates to: HPEYRVLEIISVICFPNRDKTNV*LIRLYV
Trigger: CACATAAAGCCTAATCAGCAAGACATTAGTTTTGTC...CCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTCTGGATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CAA 90 bp GAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGTTTTGGGCATCCTCTGGGGTCTaGAAGTTAATTATTTTTCCA +
Preference number: 5 (lower is better)
Translates to: EYRVLEIISVICFPNRFWASSGV*KLIIFP
Trigger: TGGAAAAATAATTAACTTCAAGACCCCAGAGGATGC...CCAAAACCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360280.8
ENST00000376636.7
ENST00000467124.1
CDS-3UTR CAA 90 bp CCAGAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGTTTGCATCCTCTGGGGTCTaGAAGTTAATTATTTTTCCA +
Preference number: 5 (lower is better)
Translates to: PEYRVLEIISVICFPNRFASSGV*KLIIFP
Trigger: TGGAAAAATAATTAACTTCAAGACCCCAGAGGATGC...AAACCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTCTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360280.8
ENST00000376636.7
ENST00000467124.1
CDS-3UTR CAA 90 bp CCAGAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGTTTAAGCGTGACTCTCATTaGAATAACTGTAGAGTAAGC +
Preference number: 5 (lower is better)
Translates to: PEYRVLEIISVICFPNRFKRDSH*NNCRVS
Trigger: GCTTACTCTACAGTTATTCAAATGAGAGTCACGCTT...AAACCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTCTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CAA 90 bp CATCCAGAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGAATCACAAGCTGCTTTaGATCACAAGTACCAGAAAT +
Preference number: 5 (lower is better)
Translates to: HPEYRVLEIISVICFPNRNHKLL*ITSTRN
Trigger: ATTTCTGGTACTTGTGATCAAAAGCAGCTTGTGATT...CCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTCTGGATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS-3UTR CAA 90 bp GATTTTAGGGTACATAAACTTTATATGAGAGGGACTGTCTGTTGGAAGCATAATAACTGTATGTGCCTTTaGGCTCAGAGAGTATTTTGC +
Preference number: 5 (lower is better)
Translates to: DFRVHKLYMRGTVCWKHNNCMCL*AQRVFC
Trigger: GCAAAATACTCTCTGAGCCAAAAGGCACATACAGTT...ATTATGCTTCCAACAGACAGTCCCTCTCATATAAAGTTTATGTACCCTAAAATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS-3UTR CAA 90 bp GATTTTAGGGTACATAAACTTTATATGAGAGGGACTGTCTGTTGGAAGCATAATCCGACAAATCCTAGCTaGATTAGGTTGCCATTAACA +
Preference number: 5 (lower is better)
Translates to: DFRVHKLYMRGTVCWKHNPTNPS*IRLPLT
Trigger: TGTTAATGGCAACCTAATCAAGCTAGGATTTGTCGG...ATTATGCTTCCAACAGACAGTCCCTCTCATATAAAGTTTATGTACCCTAAAATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS-3UTR CAA 90 bp GGACTGTCTGTTGGAAGCATAATACACTATCTAAGATGTTGGGAATTGTGTTTACAGAGTGGCCAAAAATaGACAGTACAGATTACAAGA +
Preference number: 5 (lower is better)
Translates to: GLSVGSIIHYLRCWELCLQSGQK*TVQITR
Trigger: TCTTGTAATCTGTACTGTCAATTTTTGGCCACTCTG...TAAACACAATTCCCAACATCTTAGATAGTGTATTATGCTTCCAACAGACAGTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360280.8
CDS-3UTR CAA 90 bp TTGTCTAAGCAGATTCTAACTTCAAACTGTCTATTGTTCCAGATGCTACTTTGTAAATGGTACATCCAGTaGACTCAGGGCATTTTCTTT +
Preference number: 5 (lower is better)
Translates to: LSKQILTSNCLLFQMLLCKWYIQ*TQGIFF
Trigger: AAAGAAAATGCCCTGAGTCAACTGGATGTACCATTT...ACAAAGTAGCATCTGGAACAATAGACAGTTTGAAGTTAGAATCTGCTTAGACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR CAA 90 bp GAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGTTTTGGAGGTTGAACATCTGGTaGCTGTTCATTAGTATTTTG +
Preference number: 5 (lower is better)
Translates to: EYRVLEIISVICFPNRFWRLNIW*LFISIL
Trigger: CAAAATACTAATGAACAGCAACCAGATGTTCAACCT...CCAAAACCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CAA 90 bp TTGTCTAAGCAGATTCTAACTTCAAACTGTCTATTGTTCCAGATGCTACTTTGTTATACAGTAGACCTGTaGCTGTCTTACTGCGAAATT +
Preference number: 5 (lower is better)
Translates to: LSKQILTSNCLLFQMLLCYTVDL*LSYCEI
Trigger: AATTTCGCAGTAAGACAGCAACAGGTCTACTGTATA...ACAAAGTAGCATCTGGAACAATAGACAGTTTGAAGTTAGAATCTGCTTAGACAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR CAA 90 bp GGACTGTCTGTTGGAAGCATAATACACTATCTAAGATGTTGGGAATTGTGTTTAATTATCTCTTTAAGATaGGCCTCACCTTGTTTCACA +
Preference number: 5 (lower is better)
Translates to: GLSVGSIIHYLRCWELCLIISLR*ASPCFT
Trigger: TGTGAAACAAGGTGAGGCCAATCTTAAAGAGATAAT...TAAACACAATTCCCAACATCTTAGATAGTGTATTATGCTTCCAACAGACAGTCC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CAA 90 bp AAACTTTATATGAGAGGGACTGTCTGTTGGAAGCATAATACACTATCTAAGATGTTAATGACATCTCCTTaGTCTTCAGTCTCTGTAGTG +
Preference number: 5 (lower is better)
Translates to: KLYMRGTVCWKHNTLSKMLMTSP*SSVSVV
Trigger: CACTACAGAGACTGAAGACAAAGGAGATGTCATTAA...CATCTTAGATAGTGTATTATGCTTCCAACAGACAGTCCCTCTCATATAAAGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CAA 90 bp GATTTTAGGGTACATAAACTTTATATGAGAGGGACTGTCTGTTGGAAGCATAATTTAATGACATCTCCTTaGTCTTCAGTCTCTGTAGTG +
Preference number: 5 (lower is better)
Translates to: DFRVHKLYMRGTVCWKHNLMTSP*SSVSVV
Trigger: CACTACAGAGACTGAAGACAAAGGAGATGTCATTAA...ATTATGCTTCCAACAGACAGTCCCTCTCATATAAAGTTTATGTACCCTAAAATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CAA 90 bp TTGTCTAAGCAGATTCTAACTTCAAACTGTCTATTGTTCCAGATGCTACTTTGTTTAATGACATCTCCTTaGTCTTCAGTCTCTGTAGTG +
Preference number: 5 (lower is better)
Translates to: LSKQILTSNCLLFQMLLCLMTSP*SSVSVV
Trigger: CACTACAGAGACTGAAGACAAAGGAGATGTCATTAA...ACAAAGTAGCATCTGGAACAATAGACAGTTTGAAGTTAGAATCTGCTTAGACAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR CAA 90 bp GATTTTAGGGTACATAAACTTTATATGAGAGGGACTGTCTGTTGGAAGCATAATCCTCAAGAAAGACATTaGCAACAGTCTGCAGAAATT +
Preference number: 5 (lower is better)
Translates to: DFRVHKLYMRGTVCWKHNPQERH*QQSAEI
Trigger: AATTTCTGCAGACTGTTGCAAATGTCTTTCTTGAGG...ATTATGCTTCCAACAGACAGTCCCTCTCATATAAAGTTTATGTACCCTAAAATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CAA 90 bp GAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGTTTTGGGCTTTCTTTTTCATCTaGATACCAAGATTCCATGGT +
Preference number: 5 (lower is better)
Translates to: EYRVLEIISVICFPNRFWAFFFI*IPRFHG
Trigger: ACCATGGAATCTTGGTATCAAGATGAAAAAGAAAGC...CCAAAACCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CAA 90 bp GGACTGTCTGTTGGAAGCATAATACACTATCTAAGATGTTGGGAATTGTGTTTATATATAGGCTACTTCTaGCTTCGTGTAATTGTTGAC +
Preference number: 5 (lower is better)
Translates to: GLSVGSIIHYLRCWELCLYIGYF*LRVIVD
Trigger: GTCAACAATTACACGAAGCAAGAAGTAGCCTATATA...TAAACACAATTCCCAACATCTTAGATAGTGTATTATGCTTCCAACAGACAGTCC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CAA 90 bp CCAGAATACAGGGTACTTGAAATCATTTCTGTAATATGCTTCCCAAACAGGTTTTCTCATGAAATAGGCTaGAGGAAATATTTCAAAGGC +
Preference number: 5 (lower is better)
Translates to: PEYRVLEIISVICFPNRFSHEIG*RKYFKG
Trigger: GCCTTTGAAATATTTCCTCAAGCCTATTTCATGAGA...AAACCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTCTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CAA 90 bp AAACTTTATATGAGAGGGACTGTCTGTTGGAAGCATAATACACTATCTAAGATGGAAATTCTCAATCTATaGGCAACGGGACAGGTTATT +
Preference number: 5 (lower is better)
Translates to: KLYMRGTVCWKHNTLSKMEILNL*ATGQVI
Trigger: AATAACCTGTCCCGTTGCCAATAGATTGAGAATTTC...CATCTTAGATAGTGTATTATGCTTCCAACAGACAGTCCCTCTCATATAAAGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CAA 90 bp TTGTCTAAGCAGATTCTAACTTCAAACTGTCTATTGTTCCAGATGCTACTTTGTACTGTTGGCTTTCACTaGCAAAGTCATGCATTAACT +
Preference number: 5 (lower is better)
Translates to: LSKQILTSNCLLFQMLLCTVGFH*QSHALT
Trigger: AGTTAATGCATGACTTTGCAAGTGAAAGCCAACAGT...ACAAAGTAGCATCTGGAACAATAGACAGTTTGAAGTTAGAATCTGCTTAGACAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS TCA 90 bp AACTCTACTGTAAAGCAGCTGTACACTTGTAAGTTGAATATCAAATaGATCATAAGCTCTATCCATTATCTCTTTAAGATTGGCCTCACC +
Preference number: 5 (lower is better)
Translates to: NSTVKQLYTCKLNIK*IISSIHYLFKIGLT
Trigger: GGTGAGGCCAATCTTAAAGAGATAATGGATAGAGCTTATGATTCATTTGATATTCAACTTACAAGTGTACAGCTGCTTTACAGTAGAGTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360280.8
ENST00000376636.7
ENST00000643348.1
ENST00000645632.1
CDS-3UTR CAA 90 bp GATTTTAGGGTACATAAACTTTATATGAGAGGGACTGTCTGTTGGAAGCATAATCGGCAGATGTTGTTCTaGATCAACTACTTTTTGTTT +
Preference number: 5 (lower is better)
Translates to: DFRVHKLYMRGTVCWKHNRQMLF*INYFLF
Trigger: AAACAAAAAGTAGTTGATCAAGAACAACATCTGCCG...ATTATGCTTCCAACAGACAGTCCCTCTCATATAAAGTTTATGTACCCTAAAATC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CAA 90 bp AAGCGTGACTCTCATTTGAATAACTGTAGAGTAAGCAAACCAGAAATTCTCAATAGGTTGAACATCTGGTaGCTGTTCATTAGTATTTTG +
Preference number: 5 (lower is better)
Translates to: KRDSHLNNCRVSKPEILNRLNIW*LFISIL
Trigger: CAAAATACTAATGAACAGCAACCAGATGTTCAACCT...ATTGAGAATTTCTGGTTTGCTTACTCTACAGTTATTCAAATGAGAGTCACGCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CAA 90 bp TTGTCTAAGCAGATTCTAACTTCAAACTGTCTATTGTTCCAGATGCTACTTTGTAGGTTGAACATCTGGTaGCTGTTCATTAGTATTTTG +
Preference number: 5 (lower is better)
Translates to: LSKQILTSNCLLFQMLLCRLNIW*LFISIL
Trigger: CAAAATACTAATGAACAGCAACCAGATGTTCAACCT...ACAAAGTAGCATCTGGAACAATAGACAGTTTGAAGTTAGAATCTGCTTAGACAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR CAA 90 bp AGACATTTGCAACAGTCTGCAGAAATTCTACGCTTGCACAAATATACATTTCTTTCCATCATGTCTTTTTaGTCAAAACCAACTGTCAGT +
Preference number: 5 (lower is better)
Translates to: RHLQQSAEILRLHKYTFLSIMSF*SKPTVS
Trigger: ACTGACAGTTGGTTTTGACAAAAAAGACATGATGGA...AAGAAATGTATATTTGTGCAAGCGTAGAATTTCTGCAGACTGTTGCAAATGTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493341.1
CDS-3UTR CAA 90 bp TTGTCTAAGCAGATTCTAACTTCAAACTGTCTATTGTTCCAGATGCTACTTTGTTCCATCATGTCTTTTTaGTCAAAACCAACTGTCAGT +
Preference number: 5 (lower is better)
Translates to: LSKQILTSNCLLFQMLLCSIMSF*SKPTVS
Trigger: ACTGACAGTTGGTTTTGACAAAAAAGACATGATGGA...ACAAAGTAGCATCTGGAACAATAGACAGTTTGAAGTTAGAATCTGCTTAGACAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR CAA 90 bp AAGCGTGACTCTCATTTGAATAACTGTAGAGTAAGCAAACCAGAAATTCTCAATACAAATATACATTTCTaGAAAGACCGCATCAGTCAC +
Preference number: 5 (lower is better)
Translates to: KRDSHLNNCRVSKPEILNTNIHF*KDRISH
Trigger: GTGACTGATGCGGTCTTTCAAGAAATGTATATTTGT...ATTGAGAATTTCTGGTTTGCTTACTCTACAGTTATTCAAATGAGAGTCACGCTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CAA 90 bp TTGTCTAAGCAGATTCTAACTTCAAACTGTCTATTGTTCCAGATGCTACTTTGTACAAATATACATTTCTaGAAAGACCGCATCAGTCAC +
Preference number: 5 (lower is better)
Translates to: LSKQILTSNCLLFQMLLCTNIHF*KDRISH
Trigger: GTGACTGATGCGGTCTTTCAAGAAATGTATATTTGT...ACAAAGTAGCATCTGGAACAATAGACAGTTTGAAGTTAGAATCTGCTTAGACAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS-3UTR CAA 90 bp AAACTTTATATGAGAGGGACTGTCTGTTGGAAGCATAATACACTATCTAAGATGGCTTTCTTTTTCATCTaGATACCAAGATTCCATGGT +
Preference number: 5 (lower is better)
Translates to: KLYMRGTVCWKHNTLSKMAFFFI*IPRFHG
Trigger: ACCATGGAATCTTGGTATCAAGATGAAAAAGAAAGC...CATCTTAGATAGTGTATTATGCTTCCAACAGACAGTCCCTCTCATATAAAGTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CAA 90 bp AAGCGTGACTCTCATTTGAATAACTGTAGAGTAAGCAAACCAGAAATTCTCAATAATTCCTTCACACATTaGATAGTTCTCATCTTCTGG +
Preference number: 5 (lower is better)
Translates to: KRDSHLNNCRVSKPEILNNSFTH*IVLIFW
Trigger: CCAGAAGATGAGAACTATCAAATGTGTGAAGGAATT...ATTGAGAATTTCTGGTTTGCTTACTCTACAGTTATTCAAATGAGAGTCACGCTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360280.8
ENST00000376636.7
CDS-3UTR CAA 90 bp TTGTCTAAGCAGATTCTAACTTCAAACTGTCTATTGTTCCAGATGCTACTTTGTACTTCAAACTGTCTATaGTTCCAGATGCTACTTTGT +
Preference number: 5 (lower is better)
Translates to: LSKQILTSNCLLFQMLLCTSNCL*FQMLLC
Trigger: ACAAAGTAGCATCTGGAACAATAGACAGTTTGAAGT...ACAAAGTAGCATCTGGAACAATAGACAGTTTGAAGTTAGAATCTGCTTAGACAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645632.1
CDS GCA 72 bp ACGGAGGCGGTCGCTCTCACGACGCGTGCGCAAGTCTaGGCGCGGCTGGAGGCGGAGCGCGGCGCAGACCTG +
Preference number: 6 (lower is better)
Translates to: TEAVALTTRAQV*ARLEAERGADL
Trigger: CAGGTCTGCGCCGCGCTCCGCCTCCAGCCGCGCGCAGACTTGCGCACGCGTCGTGAGAGCGACCGCCTCCGT
75% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376636.7
CDS GCA 72 bp CCAGCGAGAGACGGAGGCGGTCGCTCTCACGACGCGTaGGCAAGTCTGCGCGCGGCTGGAGGCGGAGCGCGG +
Preference number: 6 (lower is better)
Translates to: PARDGGGRSHDA*ASLRAAGGGAR
Trigger: CCGCGCTCCGCCTCCAGCCGCGCGCAGACTTGCGCACGCGTCGTGAGAGCGACCGCCTCCGTCTCTCGCTGG
75% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376636.7
CDS GCA 72 bp GGTAATTCGGTTCACCGGCTCCGGGGCGGCTTCAGCTaGGGCGCCCCCGCTGGCCCAACGCGCAGCCCTAGC +
Preference number: 6 (lower is better)
Translates to: GNSVHRLRGGFS*GAPAGPTRSPS
Trigger: GCTAGGGCTGCGCGTTGGGCCAGCGGGGGCGCCGCAGCTGAAGCCGCCCCGGAGCCGGTGAACCGAATTACC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360280.8
ENST00000376636.7
ENST00000643348.1
ENST00000645632.1
CDS CCA 72 bp GACCACCGACTCGAAAACCATGTTCCTCAGCCGTGGTaGGCACGGCAGCCGGCCCGTGCGCTCCTCCTCCCG +
Preference number: 6 (lower is better)
Translates to: DHRLENHVPQPW*ARQPARALLLP
Trigger: CGGGAGGAGGAGCGCACGGGCCGGCTGCCGTGCCCACCACGGCTGAGGAACATGGTTTTCGAGTCGGTGGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360280.8
ENST00000376636.7
ENST00000643348.1
ENST00000645632.1
CDS CCA 72 bp CACGACCACCGACTCGAAAACCATGTTCCTCAGCCGTaGTGGGCACGGCAGCCGGCCCGTGCGCTCCTCCTC +
Preference number: 6 (lower is better)
Translates to: HDHRLENHVPQP*WARQPARALLL
Trigger: GAGGAGGAGCGCACGGGCCGGCTGCCGTGCCCACCACGGCTGAGGAACATGGTTTTCGAGTCGGTGGTCGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360280.8
ENST00000376636.7
ENST00000643348.1
ENST00000645632.1
CDS CAA 72 bp AACCTAGAGGGTTGGCCTCAAAAGGCAGCTGGGCACTaGCAGATTGTTGGCAGCATCACCAGGACATTCTGT +
Preference number: 6 (lower is better)
Translates to: NLEGWPQKAAGH*QIVGSITRTFC
Trigger: ACAGAATGTCCTGGTGATGCTGCCAACAATCTGCAAGTGCCCAGCTGCCTTTTGAGGCCAACCCTCTAGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493341.1
CDS CAA 90 bp CCAGTCCCATCCCTCAACCTGTACGGTCTGATAACTCCATCTTCATaGAAGAACCGAGGAGGTCGCAGACTCTCCACTTCAGAAGTCTCT +
Preference number: 6 (lower is better)
Translates to: PVPSLNLYGLITPSS*KNRGGRRLSTSEVS
Trigger: AGAGACTTCTGAAGTGGAGAGTCTGCGACCTCCTCGGTTCTTCAATGAAGATGGAGTTATCAGACCGTACAGGTTGAGGGATGGGACTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360280.8
ENST00000376636.7
ENST00000643348.1
ENST00000645632.1
CDS TCA 72 bp AGTTCTTTTACACCAGTAGCAGCCATTCCAGCTGCCTaGACAGTTGCCTCAGCCAAGGCTTGTTTAGCTGCC +
Preference number: 6 (lower is better)
Translates to: SSFTPVAAIPAA*TVASAKACLAA
Trigger: GGCAGCTAAACAAGCCTTGGCTGAGGCAACTGTTCAGGCAGCTGGAATGGCTGCTACTGGTGTAAAAGAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360280.8
ENST00000376636.7
ENST00000423463.6
ENST00000493341.1
ENST00000643348.1
ENST00000645632.1
CDS CAA 72 bp TCCCTCAACCTGTACGGTCTGATAACTCCATCTTCATaGAAGAACCGAGGAGGTCGCAGACTCTCCACTTCA +
Preference number: 6 (lower is better)
Translates to: SLNLYGLITPSS*KNRGGRRLSTS
Trigger: TGAAGTGGAGAGTCTGCGACCTCCTCGGTTCTTCAATGAAGATGGAGTTATCAGACCGTACAGGTTGAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360280.8
ENST00000376636.7
ENST00000643348.1
ENST00000645632.1
CDS CAA 90 bp CTAAGAATGAACCTAGAGGGTTGGCCTCAAAAGGCAGCTGGGCACTaGCAGATTGTTGGCAGCATCACCAGGACATTCTGTATGGATTCT +
Preference number: 6 (lower is better)
Translates to: LRMNLEGWPQKAAGH*QIVGSITRTFCMDS
Trigger: AGAATCCATACAGAATGTCCTGGTGATGCTGCCAACAATCTGCAAGTGCCCAGCTGCCTTTTGAGGCCAACCCTCTAGGTTCATTCTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493341.1
CDS CAA 72 bp GAAACTGGAGACTGCGGGATGACCACAACTGGGGCTTaGATGTTAATATCCAGTGCCATTCTGGAACTCCTT +
Preference number: 6 (lower is better)
Translates to: ETGDCGMTTTGA*MLISSAILELL
Trigger: AAGGAGTTCCAGAATGGCACTGGATATTAACATCAAAGCCCCAGTTGTGGTCATCCCGCAGTCTCCAGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360280.8
ENST00000376636.7
ENST00000423463.6
ENST00000493341.1
ENST00000643348.1
ENST00000645632.1
CDS CAA 90 bp AACTGGGGCTTTGATGTTAATATCCAGTGCCATTCTGGAACTCCTTaGTGCGAGTTCTTTTACACCAGTAGCAGCCATTCCAGCTGCCTG +
Preference number: 6 (lower is better)
Translates to: NWGFDVNIQCHSGTP*CEFFYTSSSHSSCL
Trigger: CAGGCAGCTGGAATGGCTGCTACTGGTGTAAAAGAACTCGCACAAAGGAGTTCCAGAATGGCACTGGATATTAACATCAAAGCCCCAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360280.8
ENST00000376636.7
ENST00000423463.6
ENST00000493341.1
ENST00000643348.1
ENST00000645632.1
CDS CAA 90 bp ACATTTTCAGAAACTGGAGACTGCGGGATGACCACAACTGGGGCTTaGATGTTAATATCCAGTGCCATTCTGGAACTCCTTTGTGCGAGT +
Preference number: 6 (lower is better)
Translates to: TFSETGDCGMTTTGA*MLISSAILELLCAS
Trigger: ACTCGCACAAAGGAGTTCCAGAATGGCACTGGATATTAACATCAAAGCCCCAGTTGTGGTCATCCCGCAGTCTCCAGTTTCTGAAAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360280.8
ENST00000376636.7
ENST00000423463.6
ENST00000493341.1
ENST00000643348.1
ENST00000645632.1
CDS TCA 72 bp AGAGCTATTACATGCGGCTGCAGAATTTTCATGTTATaGCCAGTAGGGGTTAGGCGAACCGGAACATTAGTG +
Preference number: 6 (lower is better)
Translates to: RAITCGCRIFML*PVGVRRTGTLV
Trigger: CACTAATGTTCCGGTTCGCCTAACCCCTACTGGTCATAACATGAAAATTCTGCAGCCGCATGTAATAGCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360280.8
ENST00000376636.7
ENST00000643348.1
ENST00000645632.1
CDS TCA 72 bp TCAGATGAAGCCAGGAAGTGTTCGGCACTACTCTGGTaGTCTGACTGCTATAGTAAGACCTTTCTTCCAGAT +
Preference number: 6 (lower is better)
Translates to: SDEARKCSALLW*SDCYSKTFLPD
Trigger: ATCTGGAAGAAAGGTCTTACTATAGCAGTCAGATCACCAGAGTAGTGCCGAACACTTCCTGGCTTCATCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376646.3
ENST00000484581.6
CDS GCA 72 bp GATGTTAATATCCAGTGCCATTCTGGAACTCCTTTGTaGGAGTTCTTTTACACCAGTAGCAGCCATTCCAGC +
Preference number: 6 (lower is better)
Translates to: DVNIQCHSGTPL*EFFYTSSSHSS
Trigger: GCTGGAATGGCTGCTACTGGTGTAAAAGAACTCGCACAAAGGAGTTCCAGAATGGCACTGGATATTAACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360280.8
ENST00000376636.7
ENST00000423463.6
ENST00000493341.1
ENST00000643348.1
ENST00000645632.1
CDS GCA 72 bp GATGACCACAACTGGGGCTTTGATGTTAATATCCAGTaGCATTCTGGAACTCCTTTGTGCGAGTTCTTTTAC +
Preference number: 6 (lower is better)
Translates to: DDHNWGFDVNIQ*HSGTPLCEFFY
Trigger: GTAAAAGAACTCGCACAAAGGAGTTCCAGAATGGCACTGGATATTAACATCAAAGCCCCAGTTGTGGTCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360280.8
ENST00000376636.7
ENST00000423463.6
ENST00000493341.1
ENST00000643348.1
ENST00000645632.1
CDS CCA 72 bp TGTAGCCTGGCTTTACCCAACTGTGCAGTACAAATCTaGGCTGAATGTCCTTCACTTAGAGTAAAAACCGAA +
Preference number: 6 (lower is better)
Translates to: CSLALPNCAVQI*AECPSLRVKTE
Trigger: TTCGGTTTTTACTCTAAGTGAAGGACATTCAGCCCAGATTTGTACTGCACAGTTGGGTAAAGCCAGGCTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360280.8
ENST00000376636.7
ENST00000643348.1
ENST00000645632.1
CDS CAA 90 bp GGCATCCTTACATCCATGAAAACCATGGCCTTAGACAGTTCCAAATaGAAGTGCATGGGTACCAAAATATGCTGGGTAGATACACTGAGT +
Preference number: 6 (lower is better)
Translates to: GILTSMKTMALDSSK*KCMGTKICWVDTLS
Trigger: ACTCAGTGTATCTACCCAGCATATTTTGGTACCCATGCACTTCAATTTGGAACTGTCTAAGGCCATGGTTTTCATGGATGTAAGGATGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360280.8
ENST00000376636.7
ENST00000643348.1
ENST00000645632.1
CDS GCA 72 bp GACAGTTCCAAATTGAAGTGCATGGGTACCAAAATATaGTGGGTAGATACACTGAGTTTTCGTGCTTCTCTC +
Preference number: 6 (lower is better)
Translates to: DSSKLKCMGTKI*WVDTLSFRASL
Trigger: GAGAGAAGCACGAAAACTCAGTGTATCTACCCAGCATATTTTGGTACCCATGCACTTCAATTTGGAACTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360280.8
ENST00000376636.7
ENST00000643348.1
ENST00000645632.1
CDS CCA 72 bp GGCATCATCATATCATCCTTCTGTGTTACTTCACCATaGCTTTTTCTACATCTCCACTTCAGCCTTCTAGAG +
Preference number: 6 (lower is better)
Translates to: GIIISSFCVTSP*LFLHLHFSLLE
Trigger: CTCTAGAAGGCTGAAGTGGAGATGTAGAAAAAGCCATGGTGAAGTAACACAGAAGGATGATATGATGATGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355766.5
ENST00000360280.8
ENST00000376636.7
ENST00000643348.1
ENST00000645632.1
CDS CAA 72 bp TTTGATGTTAATATCCAGTGCCATTCTGGAACTCCTTaGTGCGAGTTCTTTTACACCAGTAGCAGCCATTCC +
Preference number: 6 (lower is better)
Translates to: FDVNIQCHSGTP*CEFFYTSSSHS
Trigger: GGAATGGCTGCTACTGGTGTAAAAGAACTCGCACAAAGGAGTTCCAGAATGGCACTGGATATTAACATCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360280.8
ENST00000376636.7
ENST00000423463.6
ENST00000493341.1
ENST00000643348.1
ENST00000645632.1
CDS CAA 90 bp AGTAGCAGCCATTCCAGCTGCCTGAACAGTTGCCTCAGCCAAGGCTaGTTTAGCTGCCTGAAAATTATCTATAAAAGCCAATATAGAATA +
Preference number: 6 (lower is better)
Translates to: SSSHSSCLNSCLSQG*FSCLKIIYKSQYRI
Trigger: TATTCTATATTGGCTTTTATAGATAATTTTCAGGCAGCTAAACAAGCCTTGGCTGAGGCAACTGTTCAGGCAGCTGGAATGGCTGCTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360280.8
ENST00000376636.7
ENST00000423463.6
ENST00000493341.1
ENST00000643348.1
ENST00000645632.1
CDS TCA 72 bp TTTCTGGTTCGAATACTTTTAACTCCAGTTGGAAACTaGAGAGGTTCTTCCAAGGGACTACATGGTGCATCA +
Preference number: 6 (lower is better)
Translates to: FLVRILLTPVGN*RGSSKGLHGAS
Trigger: TGATGCACCATGTAGTCCCTTGGAAGAACCTCTTCAGTTTCCAACTGGAGTTAAAAGTATTCGAACCAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360280.8
ENST00000376636.7
ENST00000643348.1
ENST00000645632.1
CDS GCA 72 bp ATGAAAACCATGGCCTTAGACAGTTCCAAATTGAAGTaGATGGGTACCAAAATATGCTGGGTAGATACACTG +
Preference number: 6 (lower is better)
Translates to: MKTMALDSSKLK*MGTKICWVDTL
Trigger: CAGTGTATCTACCCAGCATATTTTGGTACCCATGCACTTCAATTTGGAACTGTCTAAGGCCATGGTTTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360280.8
ENST00000376636.7
ENST00000643348.1
ENST00000645632.1
CDS CCA 72 bp AGTTCCAAATTGAAGTGCATGGGTACCAAAATATGCTaGGTAGATACACTGAGTTTTCGTGCTTCTCTCCAA +
Preference number: 6 (lower is better)
Translates to: SSKLKCMGTKIC*VDTLSFRASLQ
Trigger: TTGGAGAGAAGCACGAAAACTCAGTGTATCTACCCAGCATATTTTGGTACCCATGCACTTCAATTTGGAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360280.8
ENST00000376636.7
ENST00000643348.1
ENST00000645632.1
CDS CAA 72 bp ACATCCATGAAAACCATGGCCTTAGACAGTTCCAAATaGAAGTGCATGGGTACCAAAATATGCTGGGTAGAT +
Preference number: 6 (lower is better)
Translates to: TSMKTMALDSSK*KCMGTKICWVD
Trigger: ATCTACCCAGCATATTTTGGTACCCATGCACTTCAATTTGGAACTGTCTAAGGCCATGGTTTTCATGGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360280.8
ENST00000376636.7
ENST00000643348.1
ENST00000645632.1
CDS CAA 72 bp ATTCTCTCTCTAACTTCTCAGTGTGCTTTACACTCATaGGCTTCCATCTTGCCTTCTTCTTGGGCTTTGTTT +
Preference number: 6 (lower is better)
Translates to: ILSLTSQCALHS*ASILPSSWALF
Trigger: AAACAAAGCCCAAGAAGAAGGCAAGATGGAAGCCAATGAGTGTAAAGCACACTGAGAAGTTAGAGAGAGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360280.8
ENST00000376636.7
ENST00000643348.1
ENST00000645632.1
CDS CAA 72 bp GAAAGACCACGTCGGCTGACGGCAGTTATCTTCCAATaGCTATTAAGGCAGTGTTTGAAGCTAATTATAAAC +
Preference number: 6 (lower is better)
Translates to: ERPRRLTAVIFQ*LLRQCLKLIIN
Trigger: GTTTATAATTAGCTTCAAACACTGCCTTAATAGCAATTGGAAGATAACTGCCGTCAGCCGACGTGGTCTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484581.6
CDS CAA 90 bp TGGGGAGCGAATTGTGACCTTCTTACTTCCTTCTACTGTATCAATTaGACAAACAATAGATCTTTCAACGCCAGACTCTCTGTGTCTTAC +
Preference number: 6 (lower is better)
Translates to: WGANCDLLTSFYCIN*TNNRSFNARLSVSY
Trigger: GTAAGACACAGAGAGTCTGGCGTTGAAAGATCTATTGTTTGTCAAATTGATACAGTAGAAGGAAGTAAGAAGGTCACAATTCGCTCCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360280.8
ENST00000376636.7
ENST00000419472.1
ENST00000643348.1
ENST00000645632.1
CDS CAA 90 bp CTCTTTGGTAAATTCATCAAAACTATACTGCCACTCACACGTGAGTaGTCCAAATGTTCCCTTTGTTACAAACAATACACCACGTCTGGT +
Preference number: 6 (lower is better)
Translates to: LFGKFIKTILPLTRE*SKCSLCYKQYTTSG
Trigger: ACCAGACGTGGTGTATTGTTTGTAACAAAGGGAACATTTGGACAACTCACGTGTGAGTGGCAGTATAGTTTTGATGAATTTACCAAAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360280.8
ENST00000376636.7
ENST00000376646.3
ENST00000484581.6
CDS TCA 72 bp TTGATACCAAGATTCCATGGTCTAAAATCCTCAGTCTaGTCAATTTCTAAGGGTTCAAGCAAAGGCTCCCAT +
Preference number: 6 (lower is better)
Translates to: LIPRFHGLKSSV*SISKGSSKGSH
Trigger: ATGGGAGCCTTTGCTTGAACCCTTAGAAATTGATCAGACTGAGGATTTTAGACCATGGAATCTTGGTATCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360280.8
ENST00000376636.7
ENST00000419472.1
ENST00000643348.1
ENST00000645632.1
CDS TCA 72 bp AACTTGCATAAACTGGTATTCATTCAAATTTTCAGATaGAGCCAGGAAGTGTTCGGCACTACTCTGGTGATC +
Preference number: 6 (lower is better)
Translates to: NLHKLVFIQIFR*SQEVFGTTLVI
Trigger: GATCACCAGAGTAGTGCCGAACACTTCCTGGCTTCATCTGAAAATTTGAATGAATACCAGTTTATGCAAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376646.3
CDS TCA 72 bp TATATCCTTTTGGGAGGATCTTCACTCCTTTCGACTTaGATAAGAAGTTTACTAGAAGCATACTCAGGCCAA +
Preference number: 6 (lower is better)
Translates to: YILLGGSSLLST*IRSLLEAYSGQ
Trigger: TTGGCCTGAGTATGCTTCTAGTAAACTTCTTATTCAAGTCGAAAGGAGTGAAGATCCTCCCAAAAGGATATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360280.8
ENST00000376636.7
ENST00000643348.1
ENST00000645632.1
CDS GCA 72 bp ATTAACCTGAATGTCAACCACATTCATATCTGTGTATaGAGAACCAGCAGTTGCATCCATGTAAGAAACCAT +
Preference number: 6 (lower is better)
Translates to: INLNVNHIHICV*RTSSCIHVRNH
Trigger: ATGGTTTCTTACATGGATGCAACTGCTGGTTCTGCATACACAGATATGAATGTGGTTGACATTCAGGTTAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360280.8
ENST00000376636.7
ENST00000423463.6
ENST00000643348.1
ENST00000645632.1
CDS GCA 72 bp GTATATTCCTTAAATTCTCTCTCTAACTTCTCAGTGTaGTTTACACTCATTGGCTTCCATCTTGCCTTCTTC +
Preference number: 6 (lower is better)
Translates to: VYSLNSLSNFSV*FTLIGFHLAFF
Trigger: GAAGAAGGCAAGATGGAAGCCAATGAGTGTAAAGCACACTGAGAAGTTAGAGAGAGAATTTAAGGAATATAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360280.8
ENST00000376636.7
ENST00000643348.1
ENST00000645632.1
CDS GCA 72 bp ATGAATGGCTCTTTGGTAAATTCATCAAAACTATACTaGCACTCACACGTGAGTTGTCCAAATGTTCCCTTT +
Preference number: 6 (lower is better)
Translates to: MNGSLVNSSKLY*HSHVSCPNVPF
Trigger: AAAGGGAACATTTGGACAACTCACGTGTGAGTGGCAGTATAGTTTTGATGAATTTACCAAAGAGCCATTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360280.8
ENST00000376636.7
ENST00000376646.3
ENST00000484581.6
CDS TCA 72 bp CTTCCTATATGGCAGATTTTGTGCCATCATATCAACTaGTTCAAGAAGCTCCATAATACTGAAATACTGTGG +
Preference number: 6 (lower is better)
Translates to: LPIWQILCHHIN*FKKLHNTEILW
Trigger: CCACAGTATTTCAGTATTATGGAGCTTCTTGAATCAGTTGATATGATGGCACAAAATCTGCCATATAGGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360280.8
ENST00000376636.7
ENST00000643348.1
ENST00000645632.1
CDS TCA 72 bp AAAAATGATTTCTTATCTGCACTGGGGAGCGAATTGTaGCCTTCTTACTTCCTTCTACTGTATCAATTTGAC +
Preference number: 6 (lower is better)
Translates to: KNDFLSALGSEL*PSYFLLLYQFD
Trigger: GTCAAATTGATACAGTAGAAGGAAGTAAGAAGGTCACAATTCGCTCCCCAGTGCAGATAAGAAATCATTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360280.8
ENST00000376636.7
ENST00000419472.1
ENST00000643348.1
ENST00000645632.1
CDS CAA 72 bp CACATCAGAACTTGTAATGCCTATATAGGCTACTTCTaGCTTCGTGTAATTGTTGACAAGAGAAATTCCAAC +
Preference number: 6 (lower is better)
Translates to: HIRTCNAYIGYF*LRVIVDKRNSN
Trigger: GTTGGAATTTCTCTTGTCAACAATTACACGAAGCAAGAAGTAGCCTATATAGGCATTACAAGTTCTGATGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360280.8
ENST00000376636.7
ENST00000643348.1
ENST00000645632.1
CDS CAA 72 bp AAATTCATCAAAACTATACTGCCACTCACACGTGAGTaGTCCAAATGTTCCCTTTGTTACAAACAATACACC +
Preference number: 6 (lower is better)
Translates to: KFIKTILPLTRE*SKCSLCYKQYT
Trigger: GGTGTATTGTTTGTAACAAAGGGAACATTTGGACAACTCACGTGTGAGTGGCAGTATAGTTTTGATGAATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360280.8
ENST00000376636.7
ENST00000376646.3
ENST00000484581.6
CDS CCA 72 bp TCAAGATTTAATGGCAGGAGTAGATCCAGTACTTCCTaGTATGCATCATTAATAAATCGAGATCTGTATAGT +
Preference number: 6 (lower is better)
Translates to: SRFNGRSRSSTS*YASLINRDLYS
Trigger: ACTATACAGATCTCGATTTATTAATGATGCATACCAGGAAGTACTGGATCTACTCCTGCCATTAAATCTTGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360280.8
ENST00000376636.7
ENST00000423463.6
ENST00000493341.1
ENST00000643348.1
ENST00000645632.1