Pregenerated sensors for VPREB3 (Homo sapiens)
Ensembl gene IDs: ENSG00000128218Ensembl transcript IDs: ENST00000248948.4, ENST00000398465.3
Found 28 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | GAAGCAAGGCTCAGAGAAAGTTTAAAAGGGACCCAAGGTCAGGGGCAGAAATGGGGCACCGGCAGGCCATaGCCAGAGGCAGGGAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: EARLRESLKGTQGQGQKWGTGRP*PEAGRQ Trigger: CTGCCTCCCTGCCTCTGGCCATGGCCTGCCGGTGCC...CCATTTCTGCCCCTGACCTTGGGTCCCTTTTAAACTTTCTCTGAGCCTTGCTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000248948.4 ENST00000398465.3 |
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| CDS-3UTR GCA 90 bp | GGAAGCAAGGCTCAGAGAAAGTTTAAAAGGGACCCAAGGTCAGGGGCAGAAATGGCACTGCCTGCCCGCTaGTGGTACCAGGACACACCG | + |
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Preference number: 4 (lower is better) Translates to: GSKAQRKFKRDPRSGAEMALPAR*WYQDTP Trigger: CGGTGTGTCCTGGTACCAGCAGCGGGCAGGCAGTGC...CATTTCTGCCCCTGACCTTGGGTCCCTTTTAAACTTTCTCTGAGCCTTGCTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000248948.4 ENST00000398465.3 |
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| CDS-3UTR GCA 90 bp | GAAGCAAGGCTCAGAGAAAGTTTAAAAGGGACCCAAGGTCAGGGGCAGAAATGGGCACTGCCTGCCCGCTaGTGGTACCAGGACACACCG | + |
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Preference number: 4 (lower is better) Translates to: EARLRESLKGTQGQGQKWALPAR*WYQDTP Trigger: CGGTGTGTCCTGGTACCAGCAGCGGGCAGGCAGTGC...CCATTTCTGCCCCTGACCTTGGGTCCCTTTTAAACTTTCTCTGAGCCTTGCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000248948.4 ENST00000398465.3 |
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| CDS-3UTR TCA 90 bp | GGAAGCAAGGCTCAGAGAAAGTTTAAAAGGGACCCAAGGTCAGGGGCAGAAATGCCATCAGAAGGAAGCTaGGGCACCGGCAGGCCATGG | + |
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Preference number: 4 (lower is better) Translates to: GSKAQRKFKRDPRSGAEMPSEGS*GTGRPW Trigger: CCATGGCCTGCCGGTGCCTCAGCTTCCTTCTGATGG...CATTTCTGCCCCTGACCTTGGGTCCCTTTTAAACTTTCTCTGAGCCTTGCTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000248948.4 ENST00000398465.3 |
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| CDS-3UTR TCA 90 bp | GAAGCAAGGCTCAGAGAAAGTTTAAAAGGGACCCAAGGTCAGGGGCAGAAATGGCCATCAGAAGGAAGCTaGGGCACCGGCAGGCCATGG | + |
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Preference number: 4 (lower is better) Translates to: EARLRESLKGTQGQGQKWPSEGS*GTGRPW Trigger: CCATGGCCTGCCGGTGCCTCAGCTTCCTTCTGATGG...CCATTTCTGCCCCTGACCTTGGGTCCCTTTTAAACTTTCTCTGAGCCTTGCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000248948.4 ENST00000398465.3 |
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| CDS-3UTR GCA 90 bp | GAAGCAAGGCTCAGAGAAAGTTTAAAAGGGACCCAAGGTCAGGGGCAGAAATGGTCCCTGATGGTGACGTaGTGGGGGCTGAGCGTGCAG | + |
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Preference number: 4 (lower is better) Translates to: EARLRESLKGTQGQGQKWSLMVT*WGLSVQ Trigger: CTGCACGCTCAGCCCCCAGCACGTCACCATCAGGGA...CCATTTCTGCCCCTGACCTTGGGTCCCTTTTAAACTTTCTCTGAGCCTTGCTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000248948.4 ENST00000398465.3 |
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| CDS-3UTR GCA 90 bp | GAAGCAAGGCTCAGAGAAAGTTTAAAAGGGACCCAAGGTCAGGGGCAGAAATGGGATATCGAGGGGCACTaGCTGCCCGCTGCTGGTACC | + |
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Preference number: 4 (lower is better) Translates to: EARLRESLKGTQGQGQKWDIEGH*LPAAGT Trigger: GGTACCAGCAGCGGGCAGGCAGTGCCCCTCGATATC...CCATTTCTGCCCCTGACCTTGGGTCCCTTTTAAACTTTCTCTGAGCCTTGCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000248948.4 ENST00000398465.3 |
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| CDS-3UTR CCA 90 bp | GAAGCAAGGCTCAGAGAAAGTTTAAAAGGGACCCAAGGTCAGGGGCAGAAATGGCTGATGGTGACGTGCTaGGGGCTGAGCGTGCAGGAG | + |
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Preference number: 4 (lower is better) Translates to: EARLRESLKGTQGQGQKWLMVTC*GLSVQE Trigger: CTCCTGCACGCTCAGCCCCCAGCACGTCACCATCAG...CCATTTCTGCCCCTGACCTTGGGTCCCTTTTAAACTTTCTCTGAGCCTTGCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000248948.4 ENST00000398465.3 |
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| CDS-3UTR TCA 90 bp | GAAGCAAGGCTCAGAGAAAGTTTAAAAGGGACCCAAGGTCAGGGGCAGAAATGGAGCGTGCAGGAGAGTTaGGCCACTTGGCCTGGGAAG | + |
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Preference number: 4 (lower is better) Translates to: EARLRESLKGTQGQGQKWSVQES*ATWPGK Trigger: CTTCCCAGGCCAAGTGGCTCAACTCTCCTGCACGCT...CCATTTCTGCCCCTGACCTTGGGTCCCTTTTAAACTTTCTCTGAGCCTTGCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000248948.4 |
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| CDS-3UTR TCA 90 bp | GGAAGCAAGGCTCAGAGAAAGTTTAAAAGGGACCCAAGGTCAGGGGCAGAAATGAGCGTGCAGGAGAGTTaGGCCACTTGGCCTGACAGG | + |
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Preference number: 4 (lower is better) Translates to: GSKAQRKFKRDPRSGAEMSVQES*ATWPDR Trigger: CCTGTCAGGCCAAGTGGCTCAACTCTCCTGCACGCT...CATTTCTGCCCCTGACCTTGGGTCCCTTTTAAACTTTCTCTGAGCCTTGCTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398465.3 |
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| CDS-3UTR TCA 90 bp | GAAGCAAGGCTCAGAGAAAGTTTAAAAGGGACCCAAGGTCAGGGGCAGAAATGGTTGAGCCACTTGGCCTaGCAGGAAGGTCCCCATCAG | + |
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Preference number: 4 (lower is better) Translates to: EARLRESLKGTQGQGQKWLSHLA*QEGPHQ Trigger: CTGATGGGGACCTTCCTGTCAGGCCAAGTGGCTCAA...CCATTTCTGCCCCTGACCTTGGGTCCCTTTTAAACTTTCTCTGAGCCTTGCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000398465.3 |
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| CDS-3UTR GCA 90 bp | GGAAGCAAGGCTCAGAGAAAGTTTAAAAGGGACCCAAGGTCAGGGGCAGAAATGGGCCTCATCCTTGGCTaGCGAGAATCGATCGGGGAT | + |
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Preference number: 4 (lower is better) Translates to: GSKAQRKFKRDPRSGAEMGLILG*RESIGD Trigger: ATCCCCGATCGATTCTCGGCAGCCAAGGATGAGGCC...CATTTCTGCCCCTGACCTTGGGTCCCTTTTAAACTTTCTCTGAGCCTTGCTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000248948.4 ENST00000398465.3 |
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| CDS-3UTR GCA 90 bp | GAAGCAAGGCTCAGAGAAAGTTTAAAAGGGACCCAAGGTCAGGGGCAGAAATGGGCGTCGTCTTCAGGCTaGACGGGACTAATGGTGAGG | + |
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Preference number: 4 (lower is better) Translates to: EARLRESLKGTQGQGQKWASSSG*TGLMVR Trigger: CCTCACCATTAGTCCCGTGCAGCCTGAAGACGACGC...CCATTTCTGCCCCTGACCTTGGGTCCCTTTTAAACTTTCTCTGAGCCTTGCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000248948.4 ENST00000398465.3 |
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| CDS-3UTR CCA 90 bp | GAAGCAAGGCTCAGAGAAAGTTTAAAAGGGACCCAAGGTCAGGGGCAGAAATGGAGCAGTGCATCCAGCTaGGCCAGGACTGTCTGGGAA | + |
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Preference number: 4 (lower is better) Translates to: EARLRESLKGTQGQGQKWSSASS*ARTVWE Trigger: TTCCCAGACAGTCCTGGCCCAGCTGGATGCACTGCT...CCATTTCTGCCCCTGACCTTGGGTCCCTTTTAAACTTTCTCTGAGCCTTGCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000248948.4 |
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| CDS-3UTR CCA 90 bp | GGAAGCAAGGCTCAGAGAAAGTTTAAAAGGGACCCAAGGTCAGGGGCAGAAATGTGTGGGCCTCATCCTTaGCTGCCGAGAATCGATCGG | + |
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Preference number: 4 (lower is better) Translates to: GSKAQRKFKRDPRSGAEMCGPHP*LPRIDR Trigger: CCGATCGATTCTCGGCAGCCAAGGATGAGGCCCACA...CATTTCTGCCCCTGACCTTGGGTCCCTTTTAAACTTTCTCTGAGCCTTGCTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000248948.4 ENST00000398465.3 |
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| CDS-3UTR CCA 90 bp | GAAGCAAGGCTCAGAGAAAGTTTAAAAGGGACCCAAGGTCAGGGGCAGAAATGGTGTGGGCCTCATCCTTaGCTGCCGAGAATCGATCGG | + |
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Preference number: 4 (lower is better) Translates to: EARLRESLKGTQGQGQKWCGPHP*LPRIDR Trigger: CCGATCGATTCTCGGCAGCCAAGGATGAGGCCCACA...CCATTTCTGCCCCTGACCTTGGGTCCCTTTTAAACTTTCTCTGAGCCTTGCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000248948.4 ENST00000398465.3 |
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| CDS-3UTR CCA 90 bp | GAAGCAAGGCTCAGAGAAAGTTTAAAAGGGACCCAAGGTCAGGGGCAGAAATGGTGGGCCAGGACTGTCTaGGAAACTGACAGGAAGGTC | + |
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Preference number: 4 (lower is better) Translates to: EARLRESLKGTQGQGQKWWARTV*ETDRKV Trigger: GACCTTCCTGTCAGTTTCCCAGACAGTCCTGGCCCA...CCATTTCTGCCCCTGACCTTGGGTCCCTTTTAAACTTTCTCTGAGCCTTGCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000248948.4 |
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| CDS-3UTR CCA 90 bp | GGAAGCAAGGCTCAGAGAAAGTTTAAAAGGGACCCAAGGTCAGGGGCAGAAATGTTGAGCCACTTGGCCTaGGAAGACCAGCAGTGCATC | + |
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Preference number: 4 (lower is better) Translates to: GSKAQRKFKRDPRSGAEMLSHLA*EDQQCI Trigger: GATGCACTGCTGGTCTTCCCAGGCCAAGTGGCTCAA...CATTTCTGCCCCTGACCTTGGGTCCCTTTTAAACTTTCTCTGAGCCTTGCTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000248948.4 |
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| CDS TCA 90 bp | GTTGAGCCACTTGGCCTGACAGGAAGGTCCCCATCAGAAGGAAGCTaGGGCACCGGCAGGCCATGGCCAGAGGCAGGGAGGCAGGCAAGT | + |
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Preference number: 5 (lower is better) Translates to: VEPLGLTGRSPSEGS*GTGRPWPEAGRQAS Trigger: ACTTGCCTGCCTCCCTGCCTCTGGCCATGGCCTGCCGGTGCCTCAGCTTCCTTCTGATGGGGACCTTCCTGTCAGGCCAAGTGGCTCAAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398465.3 |
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| CDS TCA 90 bp | GGACTGTCTGGGAAACTGACAGGAAGGTCCCCATCAGAAGGAAGCTaGGGCACCGGCAGGCCATGGCCAGAGGCAGGGAGGCAGGCAAGT | + |
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Preference number: 5 (lower is better) Translates to: GLSGKLTGRSPSEGS*GTGRPWPEAGRQAS Trigger: ACTTGCCTGCCTCCCTGCCTCTGGCCATGGCCTGCCGGTGCCTCAGCTTCCTTCTGATGGGGACCTTCCTGTCAGTTTCCCAGACAGTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000248948.4 |
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| CDS-3UTR CAA 90 bp | GAAGCAAGGCTCAGAGAAAGTTTAAAAGGGACCCAAGGTCAGGGGCAGAAATGGGAGCGTGCAGGAGAGTaGAGCCACTTGGCCTGGGAA | + |
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Preference number: 5 (lower is better) Translates to: EARLRESLKGTQGQGQKWERAGE*SHLAWE Trigger: TTCCCAGGCCAAGTGGCTCAACTCTCCTGCACGCTC...CCATTTCTGCCCCTGACCTTGGGTCCCTTTTAAACTTTCTCTGAGCCTTGCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000248948.4 |
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| CDS-3UTR CAA 90 bp | GGAAGCAAGGCTCAGAGAAAGTTTAAAAGGGACCCAAGGTCAGGGGCAGAAATGTTGTGGGCCTCATCCTaGGCTGCCGAGAATCGATCG | + |
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Preference number: 5 (lower is better) Translates to: GSKAQRKFKRDPRSGAEMLWASS*AAENRS Trigger: CGATCGATTCTCGGCAGCCAAGGATGAGGCCCACAA...CATTTCTGCCCCTGACCTTGGGTCCCTTTTAAACTTTCTCTGAGCCTTGCTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000248948.4 ENST00000398465.3 |
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| CDS-3UTR CAA 90 bp | GGAAGCAAGGCTCAGAGAAAGTTTAAAAGGGACCCAAGGTCAGGGGCAGAAATGGTGAGGACACAGGCATaGTGGGCCTCATCCTTGGCT | + |
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Preference number: 5 (lower is better) Translates to: GSKAQRKFKRDPRSGAEMVRTQA*WASSLA Trigger: AGCCAAGGATGAGGCCCACAATGCCTGTGTCCTCAC...CATTTCTGCCCCTGACCTTGGGTCCCTTTTAAACTTTCTCTGAGCCTTGCTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000248948.4 ENST00000398465.3 |
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| CDS-3UTR CAA 90 bp | GAAGCAAGGCTCAGAGAAAGTTTAAAAGGGACCCAAGGTCAGGGGCAGAAATGGGTGAGGACACAGGCATaGTGGGCCTCATCCTTGGCT | + |
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Preference number: 5 (lower is better) Translates to: EARLRESLKGTQGQGQKWVRTQA*WASSLA Trigger: AGCCAAGGATGAGGCCCACAATGCCTGTGTCCTCAC...CCATTTCTGCCCCTGACCTTGGGTCCCTTTTAAACTTTCTCTGAGCCTTGCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000248948.4 ENST00000398465.3 |
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| CDS TCA 72 bp | ATGGTGACGTGCTGGGGGCTGAGCGTGCAGGAGAGTTaGGCCACTTGGCCTGGGAAGACCAGCAGTGCATCC | + |
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Preference number: 6 (lower is better) Translates to: MVTCWGLSVQES*ATWPGKTSSAS Trigger: GGATGCACTGCTGGTCTTCCCAGGCCAAGTGGCTCAACTCTCCTGCACGCTCAGCCCCCAGCACGTCACCAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000248948.4 |
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| CDS GCA 72 bp | CCTCCGAGCGGTAGTAGAGGAGATATCGAGGGGCACTaGCTGCCCGCTGCTGGTACCAGGACACACCGTAGT | + |
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Preference number: 6 (lower is better) Translates to: PPSGSRGDIEGH*LPAAGTRTHRS Trigger: ACTACGGTGTGTCCTGGTACCAGCAGCGGGCAGGCAGTGCCCCTCGATATCTCCTCTACTACCGCTCGGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000248948.4 ENST00000398465.3 |
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| CDS GCA 72 bp | GGTGAGGACACAGGCATTGTGGGCCTCATCCTTGGCTaGCGAGAATCGATCGGGGATGTCAGCAGGCCGGTG | + |
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Preference number: 6 (lower is better) Translates to: GEDTGIVGLILG*RESIGDVSRPV Trigger: CACCGGCCTGCTGACATCCCCGATCGATTCTCGGCAGCCAAGGATGAGGCCCACAATGCCTGTGTCCTCACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000248948.4 ENST00000398465.3 |
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| CDS TCA 72 bp | ATGGTGACGTGCTGGGGGCTGAGCGTGCAGGAGAGTTaGGCCACTTGGCCTGACAGGAAGGTCCCCATCAGA | + |
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Preference number: 6 (lower is better) Translates to: MVTCWGLSVQES*ATWPDRKVPIR Trigger: TCTGATGGGGACCTTCCTGTCAGGCCAAGTGGCTCAACTCTCCTGCACGCTCAGCCCCCAGCACGTCACCAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000398465.3 |
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