Pregenerated sensors for VPREB1 (Homo sapiens)
Ensembl gene IDs: ENSG00000169575Ensembl transcript IDs: ENST00000302273.2, ENST00000403807.4
Found 44 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTCTCCAATGGGGATTTACAGCAACACTGCAGGACCAGGAGATGCTaGGTGGCTCAGCCTCCTCGGCGCTTCGGGCGGCGACTCCACCCT | + |
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Preference number: 1 (lower is better) Translates to: VSNGDLQQHCRTRRC*VAQPPRRFGRRLHP Trigger: AGGGTGGAGTCGCCGCCCGAAGCGCCGAGGAGGCTGAGCCACTCAGCATCTCCTGGTCCTGCAGTGTTGCTGTAAATCCCCATTGGAGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000302273.2 ENST00000403807.4 |
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| 3UTR CCA 90 bp | CCAATGGGGATTTACAGCAACACTGCAGGACCAGGAGATGCTGAGTaGCTCAGCCTCCTCGGCGCTTCGGGCGGCGACTCCACCCTCTTC | + |
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Preference number: 1 (lower is better) Translates to: PMGIYSNTAGPGDAE*LSLLGASGGDSTLF Trigger: GAAGAGGGTGGAGTCGCCGCCCGAAGCGCCGAGGAGGCTGAGCCACTCAGCATCTCCTGGTCCTGCAGTGTTGCTGTAAATCCCCATTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000302273.2 ENST00000403807.4 |
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| 3UTR CCA 72 bp | ATTTACAGCAACACTGCAGGACCAGGAGATGCTGAGTaGCTCAGCCTCCTCGGCGCTTCGGGCGGCGACTCC | + |
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Preference number: 3 (lower is better) Translates to: IYSNTAGPGDAE*LSLLGASGGDS Trigger: GGAGTCGCCGCCCGAAGCGCCGAGGAGGCTGAGCCACTCAGCATCTCCTGGTCCTGCAGTGTTGCTGTAAAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000302273.2 ENST00000403807.4 |
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| CDS-3UTR CCA 90 bp | GGAGATGCTGAGTGGCTCAGCCTCCTCGGCGCTTCGGGCGGCGACTCCACCCTCCAAGGGCCGAGGACATaGCCGGCGGCTGATGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: GDAEWLSLLGASGGDSTLQGPRT*PAADAA Trigger: TGCTGCATCAGCCGCCGGCCATGTCCTCGGCCCTTG...GAGGGTGGAGTCGCCGCCCGAAGCGCCGAGGAGGCTGAGCCACTCAGCATCTCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000302273.2 ENST00000403807.4 |
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| CDS-3UTR CCA 90 bp | CAGGAGATGCTGAGTGGCTCAGCCTCCTCGGCGCTTCGGGCGGCGACTCCACCCGGGACCTGGGGGCCCTaGCTCTTGTCTGATTGTGAG | + |
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Preference number: 4 (lower is better) Translates to: QEMLSGSASSALRAATPPGTWGP*LLSDCE Trigger: CTCACAATCAGACAAGAGCCAGGGCCCCCAGGTCCC...GGGTGGAGTCGCCGCCCGAAGCGCCGAGGAGGCTGAGCCACTCAGCATCTCCTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000302273.2 ENST00000403807.4 |
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| CDS-3UTR CCA 90 bp | GGAGATGCTGAGTGGCTCAGCCTCCTCGGCGCTTCGGGCGGCGACTCCACCCTCCAGGAGCCCAGGACATaGTGCAGACATGCAGAGCTC | + |
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Preference number: 4 (lower is better) Translates to: GDAEWLSLLGASGGDSTLQEPRT*CRHAEL Trigger: GAGCTCTGCATGTCTGCACCATGTCCTGGGCTCCTG...GAGGGTGGAGTCGCCGCCCGAAGCGCCGAGGAGGCTGAGCCACTCAGCATCTCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000302273.2 ENST00000403807.4 |
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| CDS-3UTR CCA 90 bp | ACACTGCAGGACCAGGAGATGCTGAGTGGCTCAGCCTCCTCGGCGCTTCGGGCGCCAGGAGATGCTGAGTaGCTCAGCCTCCTCGGCGCT | + |
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Preference number: 4 (lower is better) Translates to: TLQDQEMLSGSASSALRAPGDAE*LSLLGA Trigger: AGCGCCGAGGAGGCTGAGCCACTCAGCATCTCCTGG...CGCCCGAAGCGCCGAGGAGGCTGAGCCACTCAGCATCTCCTGGTCCTGCAGTGT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000302273.2 ENST00000403807.4 |
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| CDS-3UTR TCA 90 bp | GGACCAGGAGATGCTGAGTGGCTCAGCCTCCTCGGCGCTTCGGGCGGCGACTCCAGTAGACAAACAGCATaGGCAGGACAGGAGCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: GPGDAEWLSLLGASGGDSSRQTA*AGQEPR Trigger: CCTGGGCTCCTGTCCTGCTCATGCTGTTTGTCTACT...GGAGTCGCCGCCCGAAGCGCCGAGGAGGCTGAGCCACTCAGCATCTCCTGGTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000302273.2 ENST00000403807.4 |
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| CDS-3UTR TCA 90 bp | CTGCAGGACCAGGAGATGCTGAGTGGCTCAGCCTCCTCGGCGCTTCGGGCGGCGAGTAGACAAACAGCATaGGCAGGACAGGAGCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: LQDQEMLSGSASSALRAASRQTA*AGQEPR Trigger: CCTGGGCTCCTGTCCTGCTCATGCTGTTTGTCTACT...CGCCGCCCGAAGCGCCGAGGAGGCTGAGCCACTCAGCATCTCCTGGTCCTGCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000302273.2 ENST00000403807.4 |
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| CDS-3UTR TCA 90 bp | ATGCTGAGTGGCTCAGCCTCCTCGGCGCTTCGGGCGGCGACTCCACCCTCTTCCTCCTCAGGGTGCAGGTaGGGCGGATTGTGGTTCCAA | + |
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Preference number: 4 (lower is better) Translates to: MLSGSASSALRAATPPSSSSGCR*GGLWFQ Trigger: TTGGAACCACAATCCGCCTCACCTGCACCCTGAGGA...GGAAGAGGGTGGAGTCGCCGCCCGAAGCGCCGAGGAGGCTGAGCCACTCAGCAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000302273.2 ENST00000403807.4 |
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| CDS-3UTR GCA 90 bp | CAGGAGATGCTGAGTGGCTCAGCCTCCTCGGCGCTTCGGGCGGCGACTCCACCCGGGGATGCGTGCCTCTaGTGTCTTCAGTTCAAGGGA | + |
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Preference number: 4 (lower is better) Translates to: QEMLSGSASSALRAATPPGDACL*CLQFKG Trigger: TCCCTTGAACTGAAGACAGCAGAGGCACGCATCCCC...GGGTGGAGTCGCCGCCCGAAGCGCCGAGGAGGCTGAGCCACTCAGCATCTCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000302273.2 ENST00000403807.4 |
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| CDS-3UTR GCA 90 bp | CTGCAGGACCAGGAGATGCTGAGTGGCTCAGCCTCCTCGGCGCTTCGGGCGGCGGACACGTGTCCTGGCTaGAGTGGGTTCCATTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: LQDQEMLSGSASSALRAADTCPG*SGFHFF Trigger: GAAGAAATGGAACCCACTGCAGCCAGGACACGTGTC...CGCCGCCCGAAGCGCCGAGGAGGCTGAGCCACTCAGCATCTCCTGGTCCTGCAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000302273.2 ENST00000403807.4 |
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| CDS-3UTR CCA 90 bp | TCAGCCTCCTCGGCGCTTCGGGCGGCGACTCCACCCTCTTCCATGACAGTCTCTGGGACCTGGGGGCCCTaGCTCTTGTCTGATTGTGAG | + |
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Preference number: 4 (lower is better) Translates to: SASSALRAATPPSSMTVSGTWGP*LLSDCE Trigger: CTCACAATCAGACAAGAGCCAGGGCCCCCAGGTCCC...AGAGACTGTCATGGAAGAGGGTGGAGTCGCCGCCCGAAGCGCCGAGGAGGCTGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000302273.2 ENST00000403807.4 |
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| CDS-3UTR CCA 90 bp | CTTCGGGCGGCGACTCCACCCTCTTCCATGACAGTCTCTCCAAGGGGATGCGTGCCAGGAGATGCTGAGTaGCTCAGCCTCCTCGGCGCT | + |
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Preference number: 4 (lower is better) Translates to: LRAATPPSSMTVSPRGCVPGDAE*LSLLGA Trigger: AGCGCCGAGGAGGCTGAGCCACTCAGCATCTCCTGG...CACGCATCCCCTTGGAGAGACTGTCATGGAAGAGGGTGGAGTCGCCGCCCGAAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000302273.2 ENST00000403807.4 |
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| CDS-3UTR TCA 90 bp | TCAGCCTCCTCGGCGCTTCGGGCGGCGACTCCACCCTCTTCCATGACAGTCTCTTCCTCAGGGTGCAGGTaGGGCGGATTGTGGTTCCAA | + |
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Preference number: 4 (lower is better) Translates to: SASSALRAATPPSSMTVSSSGCR*GGLWFQ Trigger: TTGGAACCACAATCCGCCTCACCTGCACCCTGAGGA...AGAGACTGTCATGGAAGAGGGTGGAGTCGCCGCCCGAAGCGCCGAGGAGGCTGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000302273.2 ENST00000403807.4 |
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| CDS-3UTR GCA 90 bp | GAGTGGCTCAGCCTCCTCGGCGCTTCGGGCGGCGACTCCACCCTCTTCCATGACGACATGGTGCAGACATaGAGAGCTCTGACTCCTGTG | + |
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Preference number: 4 (lower is better) Translates to: EWLSLLGASGGDSTLFHDDMVQT*RALTPV Trigger: CACAGGAGTCAGAGCTCTGCATGTCTGCACCATGTC...GTCATGGAAGAGGGTGGAGTCGCCGCCCGAAGCGCCGAGGAGGCTGAGCCACTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000302273.2 |
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| CDS-3UTR GCA 90 bp | GAGTGGCTCAGCCTCCTCGGCGCTTCGGGCGGCGACTCCACCCTCTTCCATGACGCTGCAGCTCAGAGATaGTCAAATACCCCCTGTTCC | + |
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Preference number: 4 (lower is better) Translates to: EWLSLLGASGGDSTLFHDAAAQR*SNTPCS Trigger: GGAACAGGGGGTATTTGAGCATCTCTGAGCTGCAGC...GTCATGGAAGAGGGTGGAGTCGCCGCCCGAAGCGCCGAGGAGGCTGAGCCACTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000302273.2 ENST00000403807.4 |
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| CDS-3UTR CCA 90 bp | TTTACAGCAACACTGCAGGACCAGGAGATGCTGAGTGGCTCAGCCTCCTCGGCGCAAGGGCCGAGGACATaGCCGGCGGCTGATGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: FTATLQDQEMLSGSASSAQGPRT*PAADAA Trigger: TGCTGCATCAGCCGCCGGCCATGTCCTCGGCCCTTG...CGCCGAGGAGGCTGAGCCACTCAGCATCTCCTGGTCCTGCAGTGTTGCTGTAAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000302273.2 ENST00000403807.4 |
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| CDS-3UTR CCA 90 bp | GCGCTTCGGGCGGCGACTCCACCCTCTTCCATGACAGTCTCTCCAAGGGGATGCTCCTGGCCACATCTTTaGATCCAGAGAAGCGAGGGG | + |
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Preference number: 4 (lower is better) Translates to: ALRAATPPSSMTVSPRGCSWPHL*IQRSEG Trigger: CCCCTCGCTTCTCTGGATCCAAAGATGTGGCCAGGA...GCATCCCCTTGGAGAGACTGTCATGGAAGAGGGTGGAGTCGCCGCCCGAAGCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000302273.2 ENST00000403807.4 |
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| CDS-3UTR CCA 90 bp | CGGGCGGCGACTCCACCCTCTTCCATGACAGTCTCTCCAAGGGGATGCGTGCCTAAGGGACACGTGTCCTaGCTGCAGTGGGTTCCATTT | + |
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Preference number: 4 (lower is better) Translates to: RAATPPSSMTVSPRGCVPKGHVS*LQWVPF Trigger: AAATGGAACCCACTGCAGCCAGGACACGTGTCCCTT...AGGCACGCATCCCCTTGGAGAGACTGTCATGGAAGAGGGTGGAGTCGCCGCCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000302273.2 ENST00000403807.4 |
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| CDS-3UTR TCA 90 bp | CCTAATGCAGTCTCCAATGGGGATTTACAGCAACACTGCAGGACCAGGAGATGCGACATGGCCGGCGGCTaGTGCAGCACCGGCTGTGCA | + |
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Preference number: 4 (lower is better) Translates to: PNAVSNGDLQQHCRTRRCDMAGG*CSTGCA Trigger: TGCACAGCCGGTGCTGCATCAGCCGCCGGCCATGTC...GCATCTCCTGGTCCTGCAGTGTTGCTGTAAATCCCCATTGGAGACTGCATTAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302273.2 |
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| CDS-3UTR TCA 90 bp | CAATGGGGATTTACAGCAACACTGCAGGACCAGGAGATGCTGAGTGGCTCAGCCAGGACCAGGAGATGCTaGGTGGCTCAGCCTCCTCGG | + |
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Preference number: 4 (lower is better) Translates to: QWGFTATLQDQEMLSGSARTRRC*VAQPPR Trigger: CCGAGGAGGCTGAGCCACTCAGCATCTCCTGGTCCT...GGCTGAGCCACTCAGCATCTCCTGGTCCTGCAGTGTTGCTGTAAATCCCCATTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000302273.2 ENST00000403807.4 |
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| CDS-3UTR GCA 90 bp | CTTCGGGCGGCGACTCCACCCTCTTCCATGACAGTCTCTCCAAGGGGATGCGTGGACACGTGTCCTGGCTaGAGTGGGTTCCATTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: LRAATPPSSMTVSPRGCVDTCPG*SGFHFF Trigger: GAAGAAATGGAACCCACTGCAGCCAGGACACGTGTC...CACGCATCCCCTTGGAGAGACTGTCATGGAAGAGGGTGGAGTCGCCGCCCGAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000302273.2 ENST00000403807.4 |
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| CDS-3UTR CCA 90 bp | CTTCGGGCGGCGACTCCACCCTCTTCCATGACAGTCTCTCCAAGGGGATGCGTGTACACACCGATGTCATaGTCGTTCCTCAGGGTGCAG | + |
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Preference number: 4 (lower is better) Translates to: LRAATPPSSMTVSPRGCVYTPMS*SFLRVQ Trigger: CTGCACCCTGAGGAACGACCATGACATCGGTGTGTA...CACGCATCCCCTTGGAGAGACTGTCATGGAAGAGGGTGGAGTCGCCGCCCGAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000302273.2 ENST00000403807.4 |
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| CDS-3UTR TCA 90 bp | CAGTCTCCAATGGGGATTTACAGCAACACTGCAGGACCAGGAGATGCTGAGTGGAGGACCAGGAGATGCTaGGTGGCTCAGCCTCCTCGG | + |
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Preference number: 4 (lower is better) Translates to: QSPMGIYSNTAGPGDAEWRTRRC*VAQPPR Trigger: CCGAGGAGGCTGAGCCACTCAGCATCTCCTGGTCCT...CCACTCAGCATCTCCTGGTCCTGCAGTGTTGCTGTAAATCCCCATTGGAGACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000302273.2 ENST00000403807.4 |
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| CDS-3UTR GCA 90 bp | ATTTACAGCAACACTGCAGGACCAGGAGATGCTGAGTGGCTCAGCCTCCTCGGCGCTGCAGCTCAGAGATaGTCAAATACCCCCTGTTCC | + |
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Preference number: 4 (lower is better) Translates to: IYSNTAGPGDAEWLSLLGAAAQR*SNTPCS Trigger: GGAACAGGGGGTATTTGAGCATCTCTGAGCTGCAGC...GCCGAGGAGGCTGAGCCACTCAGCATCTCCTGGTCCTGCAGTGTTGCTGTAAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000302273.2 ENST00000403807.4 |
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| CDS-3UTR GCA 90 bp | CAATGGGGATTTACAGCAACACTGCAGGACCAGGAGATGCTGAGTGGCTCAGCCGGGGATGCGTGCCTCTaGTGTCTTCAGTTCAAGGGA | + |
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Preference number: 4 (lower is better) Translates to: QWGFTATLQDQEMLSGSAGDACL*CLQFKG Trigger: TCCCTTGAACTGAAGACAGCAGAGGCACGCATCCCC...GGCTGAGCCACTCAGCATCTCCTGGTCCTGCAGTGTTGCTGTAAATCCCCATTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000302273.2 ENST00000403807.4 |
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| CDS-3UTR CCA 90 bp | CTCCAATGGGGATTTACAGCAACACTGCAGGACCAGGAGATGCTGAGTGGCTCACAGGAGCCCAGGACATaGTGCAGACATGCAGAGCTC | + |
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Preference number: 4 (lower is better) Translates to: LQWGFTATLQDQEMLSGSQEPRT*CRHAEL Trigger: GAGCTCTGCATGTCTGCACCATGTCCTGGGCTCCTG...TGAGCCACTCAGCATCTCCTGGTCCTGCAGTGTTGCTGTAAATCCCCATTGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000302273.2 ENST00000403807.4 |
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| CDS-3UTR CCA 90 bp | CCAATGGGGATTTACAGCAACACTGCAGGACCAGGAGATGCTGAGTGGCTCAGCGTGTCCTGGCTGCAGTaGGTTCCATTTCTTCCTCCC | + |
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Preference number: 4 (lower is better) Translates to: PMGIYSNTAGPGDAEWLSVSWLQ*VPFLPP Trigger: GGGAGGAAGAAATGGAACCCACTGCAGCCAGGACAC...GCTGAGCCACTCAGCATCTCCTGGTCCTGCAGTGTTGCTGTAAATCCCCATTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000302273.2 ENST00000403807.4 |
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| CDS-3UTR CCA 90 bp | GGATTTACAGCAACACTGCAGGACCAGGAGATGCTGAGTGGCTCAGCCTCCTCGAAGGGACACGTGTCCTaGCTGCAGTGGGTTCCATTT | + |
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Preference number: 4 (lower is better) Translates to: GFTATLQDQEMLSGSASSKGHVS*LQWVPF Trigger: AAATGGAACCCACTGCAGCCAGGACACGTGTCCCTT...CGAGGAGGCTGAGCCACTCAGCATCTCCTGGTCCTGCAGTGTTGCTGTAAATCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000302273.2 ENST00000403807.4 |
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| CDS-3UTR CCA 90 bp | TGCAGTCTCCAATGGGGATTTACAGCAACACTGCAGGACCAGGAGATGCTGAGTTCCTGGCCACATCTTTaGATCCAGAGAAGCGAGGGG | + |
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Preference number: 4 (lower is better) Translates to: CSLQWGFTATLQDQEMLSSWPHL*IQRSEG Trigger: CCCCTCGCTTCTCTGGATCCAAAGATGTGGCCAGGA...ACTCAGCATCTCCTGGTCCTGCAGTGTTGCTGTAAATCCCCATTGGAGACTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000302273.2 ENST00000403807.4 |
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| CDS-3UTR CCA 90 bp | TGCAGTCTCCAATGGGGATTTACAGCAACACTGCAGGACCAGGAGATGCTGAGTGTGTCCTGGCTGCAGTaGGTTCCATTTCTTCCTCCC | + |
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Preference number: 4 (lower is better) Translates to: CSLQWGFTATLQDQEMLSVSWLQ*VPFLPP Trigger: GGGAGGAAGAAATGGAACCCACTGCAGCCAGGACAC...ACTCAGCATCTCCTGGTCCTGCAGTGTTGCTGTAAATCCCCATTGGAGACTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000302273.2 ENST00000403807.4 |
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| CDS-3UTR CCA 90 bp | CTCCAATGGGGATTTACAGCAACACTGCAGGACCAGGAGATGCTGAGTGGCTCAAATACCCCCTGTTCCTaGCCACATCTTTGGATCCAG | + |
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Preference number: 4 (lower is better) Translates to: LQWGFTATLQDQEMLSGSNTPCS*PHLWIQ Trigger: CTGGATCCAAAGATGTGGCCAGGAACAGGGGGTATT...TGAGCCACTCAGCATCTCCTGGTCCTGCAGTGTTGCTGTAAATCCCCATTGGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000302273.2 ENST00000403807.4 |
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| CDS-3UTR CCA 90 bp | CAGTCTCCAATGGGGATTTACAGCAACACTGCAGGACCAGGAGATGCTGAGTGGAATACCCCCTGTTCCTaGCCACATCTTTGGATCCAG | + |
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Preference number: 4 (lower is better) Translates to: QSPMGIYSNTAGPGDAEWNTPCS*PHLWIQ Trigger: CTGGATCCAAAGATGTGGCCAGGAACAGGGGGTATT...CCACTCAGCATCTCCTGGTCCTGCAGTGTTGCTGTAAATCCCCATTGGAGACTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000302273.2 ENST00000403807.4 |
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| CDS-3UTR CAA 90 bp | CTGCAGGACCAGGAGATGCTGAGTGGCTCAGCCTCCTCGGCGCTTCGGGCGGCGTTCCTGGCCACATCTTaGGATCCAGAGAAGCGAGGG | + |
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Preference number: 5 (lower is better) Translates to: LQDQEMLSGSASSALRAAFLATS*DPEKRG Trigger: CCCTCGCTTCTCTGGATCCAAAGATGTGGCCAGGAA...CGCCGCCCGAAGCGCCGAGGAGGCTGAGCCACTCAGCATCTCCTGGTCCTGCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000302273.2 ENST00000403807.4 |
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| CDS TCA 90 bp | AGACGCTGTACACACCGATGTCATGGTCGTTCCTCAGGGTGCAGGTaGGGCGGATTGTGGTTCCAAGGGCCGAGGACATGGCCGGCGGCT | + |
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Preference number: 5 (lower is better) Translates to: RRCTHRCHGRSSGCR*GGLWFQGPRTWPAA Trigger: AGCCGCCGGCCATGTCCTCGGCCCTTGGAACCACAATCCGCCTCACCTGCACCCTGAGGAACGACCATGACATCGGTGTGTACAGCGTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000302273.2 ENST00000403807.4 |
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| CDS-3UTR CAA 90 bp | AACACTGCAGGACCAGGAGATGCTGAGTGGCTCAGCCTCCTCGGCGCTTCGGGCTTCCTGGCCACATCTTaGGATCCAGAGAAGCGAGGG | + |
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Preference number: 5 (lower is better) Translates to: NTAGPGDAEWLSLLGASGFLATS*DPEKRG Trigger: CCCTCGCTTCTCTGGATCCAAAGATGTGGCCAGGAA...GCCCGAAGCGCCGAGGAGGCTGAGCCACTCAGCATCTCCTGGTCCTGCAGTGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000302273.2 ENST00000403807.4 |
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| CDS CCA 90 bp | GGGGATGCGTGCCTCTGCTGTCTTCAGTTCAAGGGACACGTGTCCTaGCTGCAGTGGGTTCCATTTCTTCCTCCCACTCCCTCTCCCTCT | + |
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Preference number: 5 (lower is better) Translates to: GDACLCCLQFKGHVS*LQWVPFLPPTPSPS Trigger: AGAGGGAGAGGGAGTGGGAGGAAGAAATGGAACCCACTGCAGCCAGGACACGTGTCCCTTGAACTGAAGACAGCAGAGGCACGCATCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000302273.2 ENST00000403807.4 |
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| CDS-3UTR CAA 90 bp | GCGACTCCACCCTCTTCCATGACAGTCTCTCCAAGGGGATGCGTGCCTCTGCTGTGGGGGCCCTGGCTCTaGTCTGATTGTGAGAAATAT | + |
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Preference number: 5 (lower is better) Translates to: ATPPSSMTVSPRGCVPLLWGPWL*SDCEKY Trigger: ATATTTCTCACAATCAGACAAGAGCCAGGGCCCCCA...CAGCAGAGGCACGCATCCCCTTGGAGAGACTGTCATGGAAGAGGGTGGAGTCGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000302273.2 ENST00000403807.4 |
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| CDS-3UTR CAA 90 bp | AATTCCCTAATGCAGTCTCCAATGGGGATTTACAGCAACACTGCAGGACCAGGATGGGGGCCCTGGCTCTaGTCTGATTGTGAGAAATAT | + |
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Preference number: 5 (lower is better) Translates to: NSLMQSPMGIYSNTAGPGWGPWL*SDCEKY Trigger: ATATTTCTCACAATCAGACAAGAGCCAGGGCCCCCA...TCCTGGTCCTGCAGTGTTGCTGTAAATCCCCATTGGAGACTGCATTAGGGAATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000302273.2 ENST00000403807.4 |
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| CDS TCA 72 bp | ATTGTGGTTCCAAGGGCCGAGGACATGGCCGGCGGCTaGTGCAGCACCGGCTGTGCAGTAGACAAACAGCAT | + |
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Preference number: 6 (lower is better) Translates to: IVVPRAEDMAGG*CSTGCAVDKQH Trigger: ATGCTGTTTGTCTACTGCACAGCCGGTGCTGCATCAGCCGCCGGCCATGTCCTCGGCCCTTGGAACCACAAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000302273.2 |
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| CDS TCA 72 bp | ACACACCGATGTCATGGTCGTTCCTCAGGGTGCAGGTaGGGCGGATTGTGGTTCCAAGGGCCGAGGACATGG | + |
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Preference number: 6 (lower is better) Translates to: THRCHGRSSGCR*GGLWFQGPRTW Trigger: CCATGTCCTCGGCCCTTGGAACCACAATCCGCCTCACCTGCACCCTGAGGAACGACCATGACATCGGTGTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000302273.2 ENST00000403807.4 |
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| CDS CCA 72 bp | TGCCTCTGCTGTCTTCAGTTCAAGGGACACGTGTCCTaGCTGCAGTGGGTTCCATTTCTTCCTCCCACTCCC | + |
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Preference number: 6 (lower is better) Translates to: CLCCLQFKGHVS*LQWVPFLPPTP Trigger: GGGAGTGGGAGGAAGAAATGGAACCCACTGCAGCCAGGACACGTGTCCCTTGAACTGAAGACAGCAGAGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000302273.2 ENST00000403807.4 |
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| CDS GCA 72 bp | TCTGCTGTCTTCAGTTCAAGGGACACGTGTCCTGGCTaGAGTGGGTTCCATTTCTTCCTCCCACTCCCTCTC | + |
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Preference number: 6 (lower is better) Translates to: SAVFSSRDTCPG*SGFHFFLPLPL Trigger: GAGAGGGAGTGGGAGGAAGAAATGGAACCCACTGCAGCCAGGACACGTGTCCCTTGAACTGAAGACAGCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000302273.2 ENST00000403807.4 |
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