Pregenerated sensors for VMAC (Homo sapiens)
Ensembl gene IDs: ENSG00000187650Ensembl transcript IDs: ENST00000339485.4
Found 156 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AACAGGCTGTGCCCCTCGCCGGTTCCTGGTGTGACAGTTCCTGAGTaGGGAGGTAGGGGAATGGCTGCCGACCAGGCCAGGGTGACAGGC | + |
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Preference number: 1 (lower is better) Translates to: NRLCPSPVPGVTVPE*GGRGMAADQARVTG Trigger: GCCTGTCACCCTGGCCTGGTCGGCAGCCATTCCCCTACCTCCTCACTCAGGAACTGTCACACCAGGAACCGGCGAGGGGCACAGCCTGTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000339485.4 |
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| 3UTR TCA 90 bp | GGGCGCCATCCTGAAGGCCGTGGGTGGCCTCCGACCTTTCTGGTCTaGAACAGGCTGTGCCCCTCGCCGGTTCCTGGTGTGACAGTTCCT | + |
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Preference number: 1 (lower is better) Translates to: GRHPEGRGWPPTFLV*NRLCPSPVPGVTVP Trigger: AGGAACTGTCACACCAGGAACCGGCGAGGGGCACAGCCTGTTTCAGACCAGAAAGGTCGGAGGCCACCCACGGCCTTCAGGATGGCGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339485.4 |
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| 3UTR TCA 90 bp | CCTTTCTGGTCTGAAACAGGCTGTGCCCCTCGCCGGTTCCTGGTGTaGCAGTTCCTGAGTGAGGAGGTAGGGGAATGGCTGCCGACCAGG | + |
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Preference number: 1 (lower is better) Translates to: PFWSETGCAPRRFLV*QFLSEEVGEWLPTR Trigger: CCTGGTCGGCAGCCATTCCCCTACCTCCTCACTCAGGAACTGTCACACCAGGAACCGGCGAGGGGCACAGCCTGTTTCAGACCAGAAAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000339485.4 |
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| 3UTR TCA 90 bp | TTCCTGAGTGAGGAGGTAGGGGAATGGCTGCCGACCAGGCCAGGGTaGCAGGCTGGCCCAGAAAGGCACAGGAGTTTTCTCCTTTCCCTG | + |
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Preference number: 1 (lower is better) Translates to: FLSEEVGEWLPTRPG*QAGPERHRSFLLSL Trigger: CAGGGAAAGGAGAAAACTCCTGTGCCTTTCTGGGCCAGCCTGTCACCCTGGCCTGGTCGGCAGCCATTCCCCTACCTCCTCACTCAGGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000339485.4 |
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| 3UTR TCA 90 bp | CTCCTTGTTCATCCAGAGGAGAAAATGGGCCCATTGTTACTGCACTaGGGGGTCACTGTTGCCAGGCAGGCAGGCGGGCGCCATCCTGAA | + |
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Preference number: 1 (lower is better) Translates to: LLVHPEEKMGPLLLH*GVTVARQAGGRHPE Trigger: TTCAGGATGGCGCCCGCCTGCCTGCCTGGCAACAGTGACCCCTCAGTGCAGTAACAATGGGCCCATTTTCTCCTCTGGATGAACAAGGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000339485.4 |
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| 3UTR TCA 90 bp | CAGGCTGGCCCAGAAAGGCACAGGAGTTTTCTCCTTTCCCTGGTTTaGCAACAAGCAAAGCACCCTGAATGTCCTGGGCTAAGAAGGACA | + |
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Preference number: 1 (lower is better) Translates to: QAGPERHRSFLLSLV*QQAKHPECPGLRRT Trigger: TGTCCTTCTTAGCCCAGGACATTCAGGGTGCTTTGCTTGTTGTCAAACCAGGGAAAGGAGAAAACTCCTGTGCCTTTCTGGGCCAGCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339485.4 |
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| 3UTR CCA 90 bp | ACTCACACCCTGGCTAAAGAGGGTGCCCTGAACTCCAGGCAAGCTTaGCCAAGTCTTGCCAGAAATCCAGATCTTTGTGTTTGCATTGCC | + |
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Preference number: 1 (lower is better) Translates to: THTLAKEGALNSRQA*PSLARNPDLCVCIA Trigger: GGCAATGCAAACACAAAGATCTGGATTTCTGGCAAGACTTGGCCAAGCTTGCCTGGAGTTCAGGGCACCCTCTTTAGCCAGGGTGTGAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339485.4 |
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| 3UTR CCA 90 bp | TACAGGGAAACTCGAAGATTAGATGCAATCGCTGTAGAGAGTGCTTaGCCTACACTCCCTAGATTCTACCTGGCCCAGCAGGACCCTACC | + |
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Preference number: 1 (lower is better) Translates to: YRETRRLDAIAVESA*PTLPRFYLAQQDPT Trigger: GGTAGGGTCCTGCTGGGCCAGGTAGAATCTAGGGAGTGTAGGCCAAGCACTCTCTACAGCGATTGCATCTAATCTTCGAGTTTCCCTGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339485.4 |
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| 3UTR GCA 90 bp | AGGCAAGCTTGGCCAAGTCTTGCCAGAAATCCAGATCTTTGTGTTTaGATTGCCAGGTTTTTAGCAAGGGTGACTGATTCAAAGCTTAAA | + |
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Preference number: 1 (lower is better) Translates to: RQAWPSLARNPDLCV*IARFLARVTDSKLK Trigger: TTTAAGCTTTGAATCAGTCACCCTTGCTAAAAACCTGGCAATGCAAACACAAAGATCTGGATTTCTGGCAAGACTTGGCCAAGCTTGCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000339485.4 |
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| 3UTR-3UTR GCA 90 bp | GCCTCCGACCTTTCTGGTCTGAAACAGGCTGTGCCCCTCGCCGGTTCCTGGTGTGCCGTAGGGTCCCCCTaGAGGGTGCTGGTGACTCCC | + |
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Preference number: 2 (lower is better) Translates to: ASDLSGLKQAVPLAGSWCAVGSP*RVLVTP Trigger: GGGAGTCACCAGCACCCTGCAGGGGGACCCTACGGC...ACACCAGGAACCGGCGAGGGGCACAGCCTGTTTCAGACCAGAAAGGTCGGAGGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000339485.4 |
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| 3UTR-3UTR TCA 90 bp | CAACCTCCGCCTCCCGGGTTCAGTAGCTGGGATTACAGGCACCCGCCACCAAGCCCTGCAGGGTGCTGGTaGCTCCCAAGGACACTGACA | + |
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Preference number: 2 (lower is better) Translates to: QPPPPGFSSWDYRHPPPSPAGCW*LPRTLT Trigger: TGTCAGTGTCCTTGGGAGTCACCAGCACCCTGCAGG...GCTTGGTGGCGGGTGCCTGTAATCCCAGCTACTGAACCCGGGAGGCGGAGGTTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339485.4 |
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| 3UTR-3UTR TCA 90 bp | CCAGCAGGACCCTACCAGGAGGCACAAATAACACAGAGGGCCTCCCTCTTGCCCCCGACCTTTCTGGTCTaGAACAGGCTGTGCCCCTCG | + |
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Preference number: 2 (lower is better) Translates to: PAGPYQEAQITQRASLLPPTFLV*NRLCPS Trigger: CGAGGGGCACAGCCTGTTTCAGACCAGAAAGGTCGG...GGGCAAGAGGGAGGCCCTCTGTGTTATTTGTGCCTCCTGGTAGGGTCCTGCTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000339485.4 |
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| 3UTR-3UTR GCA 90 bp | CTACACTCCCTAGATTCTACCTGGCCCAGCAGGACCCTACCAGGAGGCACAAATCTGAGGGGTCACTGTTaGCAGGCAGGCAGGCGGGCG | + |
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Preference number: 2 (lower is better) Translates to: LHSLDSTWPSRTLPGGTNLRGHC*QAGRRA Trigger: CGCCCGCCTGCCTGCCTGGCAACAGTGACCCCTCAG...ATTTGTGCCTCCTGGTAGGGTCCTGCTGGGCCAGGTAGAATCTAGGGAGTGTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339485.4 |
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| 3UTR-3UTR TCA 90 bp | TTCCCCCAGAATTGGAAGTGGCCCTGGCCCTCCAGACCCGGAGTGTGTTCCCTTCATCCGGTTTATTCTTaGGCACAGACAGGCCCCAGC | + |
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Preference number: 2 (lower is better) Translates to: FPQNWKWPWPSRPGVCSLHPVYS*AQTGPS Trigger: GCTGGGGCCTGTCTGTGCTCAAGAATAAACCGGATG...AAGGGAACACACTCCGGGTCTGGAGGGCCAGGGCCACTTCCAATTCTGGGGGAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000339485.4 |
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| 3UTR-3UTR CCA 90 bp | TCCCTAGATTCTACCTGGCCCAGCAGGACCCTACCAGGAGGCACAAATAACACAGAGGAGGTAGGGGAATaGCTGCCGACCAGGCCAGGG | + |
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Preference number: 2 (lower is better) Translates to: SLDSTWPSRTLPGGTNNTEEVGE*LPTRPG Trigger: CCCTGGCCTGGTCGGCAGCCATTCCCCTACCTCCTC...TGTGTTATTTGTGCCTCCTGGTAGGGTCCTGCTGGGCCAGGTAGAATCTAGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339485.4 |
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| 3UTR-3UTR TCA 90 bp | CTACACTCCCTAGATTCTACCTGGCCCAGCAGGACCCTACCAGGAGGCACAAATCGCCGGTTCCTGGTGTaGCAGTTCCTGAGTGAGGAG | + |
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Preference number: 2 (lower is better) Translates to: LHSLDSTWPSRTLPGGTNRRFLV*QFLSEE Trigger: CTCCTCACTCAGGAACTGTCACACCAGGAACCGGCG...ATTTGTGCCTCCTGGTAGGGTCCTGCTGGGCCAGGTAGAATCTAGGGAGTGTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339485.4 |
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| 3UTR-3UTR TCA 90 bp | CTACACTCCCTAGATTCTACCTGGCCCAGCAGGACCCTACCAGGAGGCACAAATCTAAAGAGGGTGCCCTaGACTCCAGGCAAGCTTGGC | + |
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Preference number: 2 (lower is better) Translates to: LHSLDSTWPSRTLPGGTNLKRVP*TPGKLG Trigger: GCCAAGCTTGCCTGGAGTTCAGGGCACCCTCTTTAG...ATTTGTGCCTCCTGGTAGGGTCCTGCTGGGCCAGGTAGAATCTAGGGAGTGTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339485.4 |
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| 3UTR-3UTR GCA 90 bp | CCTACACTCCCTAGATTCTACCTGGCCCAGCAGGACCCTACCAGGAGGCACAAATCTGGGTTAAACGTCTaGACCTGGCCTGTGGGCCTA | + |
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Preference number: 2 (lower is better) Translates to: PTLPRFYLAQQDPTRRHKSGLNV*TWPVGL Trigger: TAGGCCCACAGGCCAGGTGCAGACGTTTAACCCAGA...TTTGTGCCTCCTGGTAGGGTCCTGCTGGGCCAGGTAGAATCTAGGGAGTGTAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339485.4 |
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| 3UTR-3UTR CCA 90 bp | CACTCCCTAGATTCTACCTGGCCCAGCAGGACCCTACCAGGAGGCACAAATAACGGCCTCCGACCTTTCTaGTCTGAAACAGGCTGTGCC | + |
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Preference number: 2 (lower is better) Translates to: HSLDSTWPSRTLPGGTNNGLRPF*SETGCA Trigger: GGCACAGCCTGTTTCAGACCAGAAAGGTCGGAGGCC...GTTATTTGTGCCTCCTGGTAGGGTCCTGCTGGGCCAGGTAGAATCTAGGGAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339485.4 |
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| 3UTR CAA 90 bp | GGGCCTCCCTCTTGCCCCCAGGCCAGGAAATCATCCGGTTTATTCTaGAGCACAGACAGGCCCCAGCCTGCCTTTCCTTTGTACAAACAA | + |
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Preference number: 2 (lower is better) Translates to: GPPSCPQARKSSGLF*STDRPQPAFPLYKQ Trigger: TTGTTTGTACAAAGGAAAGGCAGGCTGGGGCCTGTCTGTGCTCAAGAATAAACCGGATGATTTCCTGGCCTGGGGGCAAGAGGGAGGCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000339485.4 |
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| 3UTR CAA 90 bp | GCAGGACCCTACCAGGAGGCACAAATAACACAGAGGGCCTCCCTCTaGCCCCCAGGCCAGGAAATCATCCGGTTTATTCTTGAGCACAGA | + |
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Preference number: 2 (lower is better) Translates to: AGPYQEAQITQRASL*PPGQEIIRFILEHR Trigger: TCTGTGCTCAAGAATAAACCGGATGATTTCCTGGCCTGGGGGCAAGAGGGAGGCCCTCTGTGTTATTTGTGCCTCCTGGTAGGGTCCTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000339485.4 |
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| 3UTR-3UTR TCA 90 bp | CTACACTCCCTAGATTCTACCTGGCCCAGCAGGACCCTACCAGGAGGCACAAATGACTCCCAAGGACACTaGCAGCAGTGGCTTTCTGTC | + |
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Preference number: 2 (lower is better) Translates to: LHSLDSTWPSRTLPGGTNDSQGH*QQWLSV Trigger: GACAGAAAGCCACTGCTGTCAGTGTCCTTGGGAGTC...ATTTGTGCCTCCTGGTAGGGTCCTGCTGGGCCAGGTAGAATCTAGGGAGTGTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339485.4 |
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| 3UTR-3UTR GCA 90 bp | GCCCTGAACTCCAGGCAAGCTTGGCCAAGTCTTGCCAGAAATCCAGATCTTTGTACAGGACTTTGGCTCTaGCGTAGGGTCCCCCTGCAG | + |
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Preference number: 2 (lower is better) Translates to: ALNSRQAWPSLARNPDLCTGLWL*RRVPLQ Trigger: CTGCAGGGGGACCCTACGGCAGAGCCAAAGTCCTGT...ACAAAGATCTGGATTTCTGGCAAGACTTGGCCAAGCTTGCCTGGAGTTCAGGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000339485.4 |
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| 3UTR-3UTR CCA 90 bp | TTCCCCCAGAATTGGAAGTGGCCCTGGCCCTCCAGACCCGGAGTGTGTTCCCTTAACTCCAGGCAAGCTTaGCCAAGTCTTGCCAGAAAT | + |
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Preference number: 2 (lower is better) Translates to: FPQNWKWPWPSRPGVCSLNSRQA*PSLARN Trigger: ATTTCTGGCAAGACTTGGCCAAGCTTGCCTGGAGTT...AAGGGAACACACTCCGGGTCTGGAGGGCCAGGGCCACTTCCAATTCTGGGGGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000339485.4 |
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| 3UTR-3UTR TCA 90 bp | CCTACACTCCCTAGATTCTACCTGGCCCAGCAGGACCCTACCAGGAGGCACAAAACAAGCAAAGCACCCTaGATGTCCTGGGCTAAGAAG | + |
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Preference number: 2 (lower is better) Translates to: PTLPRFYLAQQDPTRRHKTSKAP*MSWAKK Trigger: CTTCTTAGCCCAGGACATTCAGGGTGCTTTGCTTGT...TTTGTGCCTCCTGGTAGGGTCCTGCTGGGCCAGGTAGAATCTAGGGAGTGTAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339485.4 |
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| 3UTR-3UTR TCA 90 bp | TCCCTAGATTCTACCTGGCCCAGCAGGACCCTACCAGGAGGCACAAATAACACACCATTGTTACTGCACTaGGGGGTCACTGTTGCCAGG | + |
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Preference number: 2 (lower is better) Translates to: SLDSTWPSRTLPGGTNNTPLLLH*GVTVAR Trigger: CCTGGCAACAGTGACCCCTCAGTGCAGTAACAATGG...TGTGTTATTTGTGCCTCCTGGTAGGGTCCTGCTGGGCCAGGTAGAATCTAGGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000339485.4 |
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| 3UTR-3UTR CCA 90 bp | TTCCCCCAGAATTGGAAGTGGCCCTGGCCCTCCAGACCCGGAGTGTGTTCCCTTAAGAACACTTCTGTCTaGGTTAAACGTCTGCACCTG | + |
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Preference number: 2 (lower is better) Translates to: FPQNWKWPWPSRPGVCSLKNTSV*VKRLHL Trigger: CAGGTGCAGACGTTTAACCCAGACAGAAGTGTTCTT...AAGGGAACACACTCCGGGTCTGGAGGGCCAGGGCCACTTCCAATTCTGGGGGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000339485.4 |
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| 3UTR-3UTR GCA 90 bp | CTACACTCCCTAGATTCTACCTGGCCCAGCAGGACCCTACCAGGAGGCACAAATAGACAGGCCCCAGCCTaGCTTTCCTTTGTACAAACA | + |
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Preference number: 2 (lower is better) Translates to: LHSLDSTWPSRTLPGGTNRQAPA*LSFVQT Trigger: TGTTTGTACAAAGGAAAGGCAGGCTGGGGCCTGTCT...ATTTGTGCCTCCTGGTAGGGTCCTGCTGGGCCAGGTAGAATCTAGGGAGTGTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339485.4 |
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| 3UTR-3UTR TCA 90 bp | TCCCTAGATTCTACCTGGCCCAGCAGGACCCTACCAGGAGGCACAAATAACACACTAAGGTCAGGAGTTTaGGACCAGCCTGGTCAACAT | + |
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Preference number: 2 (lower is better) Translates to: SLDSTWPSRTLPGGTNNTLRSGV*DQPGQH Trigger: ATGTTGACCAGGCTGGTCTCAAACTCCTGACCTTAG...TGTGTTATTTGTGCCTCCTGGTAGGGTCCTGCTGGGCCAGGTAGAATCTAGGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339485.4 |
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| 3UTR-3UTR TCA 90 bp | TCCCTAGATTCTACCTGGCCCAGCAGGACCCTACCAGGAGGCACAAATAACACACTCCTTTCCCTGGTTTaGCAACAAGCAAAGCACCCT | + |
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Preference number: 2 (lower is better) Translates to: SLDSTWPSRTLPGGTNNTLLSLV*QQAKHP Trigger: AGGGTGCTTTGCTTGTTGTCAAACCAGGGAAAGGAG...TGTGTTATTTGTGCCTCCTGGTAGGGTCCTGCTGGGCCAGGTAGAATCTAGGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339485.4 |
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| 3UTR-3UTR TCA 90 bp | CCTACACTCCCTAGATTCTACCTGGCCCAGCAGGACCCTACCAGGAGGCACAAAGCCTGTGGGCCTATTTaGAAACTTTTTGACTGTTCA | + |
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Preference number: 2 (lower is better) Translates to: PTLPRFYLAQQDPTRRHKACGPI*KLFDCS Trigger: TGAACAGTCAAAAAGTTTTCAAATAGGCCCACAGGC...TTTGTGCCTCCTGGTAGGGTCCTGCTGGGCCAGGTAGAATCTAGGGAGTGTAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000339485.4 |
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| 3UTR-3UTR CCA 90 bp | CACTCCCTAGATTCTACCTGGCCCAGCAGGACCCTACCAGGAGGCACAAATAACATCCAGAGGAGAAAATaGGCCCATTGTTACTGCACT | + |
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Preference number: 2 (lower is better) Translates to: HSLDSTWPSRTLPGGTNNIQRRK*AHCYCT Trigger: AGTGCAGTAACAATGGGCCCATTTTCTCCTCTGGAT...GTTATTTGTGCCTCCTGGTAGGGTCCTGCTGGGCCAGGTAGAATCTAGGGAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339485.4 |
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| 3UTR-3UTR GCA 90 bp | CCTACACTCCCTAGATTCTACCTGGCCCAGCAGGACCCTACCAGGAGGCACAAACCAGATCTTTGTGTTTaGATTGCCAGGTTTTTAGCA | + |
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Preference number: 2 (lower is better) Translates to: PTLPRFYLAQQDPTRRHKPDLCV*IARFLA Trigger: TGCTAAAAACCTGGCAATGCAAACACAAAGATCTGG...TTTGTGCCTCCTGGTAGGGTCCTGCTGGGCCAGGTAGAATCTAGGGAGTGTAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000339485.4 |
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| 3UTR CAA 90 bp | GGGTTAAACGTCTGCACCTGGCCTGTGGGCCTATTTGAAAACTTTTaGACTGTTCAGCCTGTTCTGATGCTTAGACAGGACTTTGGCTCT | + |
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Preference number: 2 (lower is better) Translates to: GLNVCTWPVGLFENF*TVQPVLMLRQDFGS Trigger: AGAGCCAAAGTCCTGTCTAAGCATCAGAACAGGCTGAACAGTCAAAAAGTTTTCAAATAGGCCCACAGGCCAGGTGCAGACGTTTAACCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000339485.4 |
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| 3UTR-3UTR GCA 90 bp | TCCCTAGATTCTACCTGGCCCAGCAGGACCCTACCAGGAGGCACAAATAACACATCTTTGTGTTTGCATTaGCAGGTTTTTAGCAAGGGT | + |
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Preference number: 2 (lower is better) Translates to: SLDSTWPSRTLPGGTNNTSLCLH*QVFSKG Trigger: ACCCTTGCTAAAAACCTGGCAATGCAAACACAAAGA...TGTGTTATTTGTGCCTCCTGGTAGGGTCCTGCTGGGCCAGGTAGAATCTAGGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000339485.4 |
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| 3UTR CAA 90 bp | GACCCGGAGTGTGTTCCCTTCACACCTCTGGGCCTCTGTTTGTTGTaGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTTTCTTTGAGACTG | + |
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Preference number: 2 (lower is better) Translates to: DPECVPFTPLGLCLL*LLLLLLLLLFSLRL Trigger: CAGTCTCAAAGAAAACAACAACAACAACAACAACAACAACAACAACAACAAACAGAGGCCCAGAGGTGTGAAGGGAACACACTCCGGGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339485.4 |
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| 3UTR TCA 72 bp | TGCCCCTCGCCGGTTCCTGGTGTGACAGTTCCTGAGTaGGGAGGTAGGGGAATGGCTGCCGACCAGGCCAGG | + |
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Preference number: 3 (lower is better) Translates to: CPSPVPGVTVPE*GGRGMAADQAR Trigger: CCTGGCCTGGTCGGCAGCCATTCCCCTACCTCCTCACTCAGGAACTGTCACACCAGGAACCGGCGAGGGGCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000339485.4 |
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| 3UTR TCA 72 bp | CCTGAAGGCCGTGGGTGGCCTCCGACCTTTCTGGTCTaGAACAGGCTGTGCCCCTCGCCGGTTCCTGGTGTG | + |
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Preference number: 3 (lower is better) Translates to: PEGRGWPPTFLV*NRLCPSPVPGV Trigger: CACACCAGGAACCGGCGAGGGGCACAGCCTGTTTCAGACCAGAAAGGTCGGAGGCCACCCACGGCCTTCAGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339485.4 |
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| 3UTR CCA 72 bp | GCCATCCTGAAGGCCGTGGGTGGCCTCCGACCTTTCTaGTCTGAAACAGGCTGTGCCCCTCGCCGGTTCCTG | + |
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Preference number: 3 (lower is better) Translates to: AILKAVGGLRPF*SETGCAPRRFL Trigger: CAGGAACCGGCGAGGGGCACAGCCTGTTTCAGACCAGAAAGGTCGGAGGCCACCCACGGCCTTCAGGATGGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339485.4 |
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| 3UTR TCA 72 bp | GAGGAGGTAGGGGAATGGCTGCCGACCAGGCCAGGGTaGCAGGCTGGCCCAGAAAGGCACAGGAGTTTTCTC | + |
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Preference number: 3 (lower is better) Translates to: EEVGEWLPTRPG*QAGPERHRSFL Trigger: GAGAAAACTCCTGTGCCTTTCTGGGCCAGCCTGTCACCCTGGCCTGGTCGGCAGCCATTCCCCTACCTCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000339485.4 |
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| 3UTR TCA 72 bp | CATCCAGAGGAGAAAATGGGCCCATTGTTACTGCACTaGGGGGTCACTGTTGCCAGGCAGGCAGGCGGGCGC | + |
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Preference number: 3 (lower is better) Translates to: HPEEKMGPLLLH*GVTVARQAGGR Trigger: GCGCCCGCCTGCCTGCCTGGCAACAGTGACCCCTCAGTGCAGTAACAATGGGCCCATTTTCTCCTCTGGATG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000339485.4 |
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| 3UTR GCA 72 bp | CTTAGACAGGACTTTGGCTCTGCCGTAGGGTCCCCCTaGAGGGTGCTGGTGACTCCCAAGGACACTGACAGC | + |
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Preference number: 3 (lower is better) Translates to: LRQDFGSAVGSP*RVLVTPKDTDS Trigger: GCTGTCAGTGTCCTTGGGAGTCACCAGCACCCTGCAGGGGGACCCTACGGCAGAGCCAAAGTCCTGTCTAAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000339485.4 |
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| 3UTR CCA 72 bp | AGGGGAATGGCTGCCGACCAGGCCAGGGTGACAGGCTaGCCCAGAAAGGCACAGGAGTTTTCTCCTTTCCCT | + |
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Preference number: 3 (lower is better) Translates to: RGMAADQARVTG*PRKAQEFSPFP Trigger: AGGGAAAGGAGAAAACTCCTGTGCCTTTCTGGGCCAGCCTGTCACCCTGGCCTGGTCGGCAGCCATTCCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000339485.4 |
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| 3UTR-3UTR CAA 90 bp | CCAGCAGGACCCTACCAGGAGGCACAAATAACACAGAGGGCCTCCCTCTTGCCCCCTGGGAGGCGGAGGTaGCAGTTAGCCAAAATCGCA | + |
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Preference number: 3 (lower is better) Translates to: PAGPYQEAQITQRASLLPPGRRR*QLAKIA Trigger: TGCGATTTTGGCTAACTGCAACCTCCGCCTCCCAGG...GGGCAAGAGGGAGGCCCTCTGTGTTATTTGTGCCTCCTGGTAGGGTCCTGCTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000339485.4 |
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| 3UTR TCA 72 bp | TCTGAAACAGGCTGTGCCCCTCGCCGGTTCCTGGTGTaGCAGTTCCTGAGTGAGGAGGTAGGGGAATGGCTG | + |
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Preference number: 3 (lower is better) Translates to: SETGCAPRRFLV*QFLSEEVGEWL Trigger: CAGCCATTCCCCTACCTCCTCACTCAGGAACTGTCACACCAGGAACCGGCGAGGGGCACAGCCTGTTTCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000339485.4 |
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| 3UTR CCA 72 bp | TTCAGCAATAACTTCCCCCAGAATTGGAAGTGGCCCTaGCCCTCCAGACCCGGAGTGTGTTCCCTTCACACC | + |
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Preference number: 3 (lower is better) Translates to: FSNNFPQNWKWP*PSRPGVCSLHT Trigger: GGTGTGAAGGGAACACACTCCGGGTCTGGAGGGCCAGGGCCACTTCCAATTCTGGGGGAAGTTATTGCTGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000339485.4 |
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| 3UTR-3UTR CAA 90 bp | CAACCTCCGCCTCCCGGGTTCAGTAGCTGGGATTACAGGCACCCGCCACCAAGCCAGAAATCCAGATCTTaGTGTTTGCATTGCCAGGTT | + |
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Preference number: 3 (lower is better) Translates to: QPPPPGFSSWDYRHPPPSQKSRS*CLHCQV Trigger: AACCTGGCAATGCAAACACAAAGATCTGGATTTCTG...GCTTGGTGGCGGGTGCCTGTAATCCCAGCTACTGAACCCGGGAGGCGGAGGTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339485.4 |
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| 3UTR GCA 72 bp | TTGTTCATCCAGAGGAGAAAATGGGCCCATTGTTACTaGACTGAGGGGTCACTGTTGCCAGGCAGGCAGGCG | + |
|
Preference number: 3 (lower is better) Translates to: LFIQRRKWAHCY*TEGSLLPGRQA Trigger: CGCCTGCCTGCCTGGCAACAGTGACCCCTCAGTGCAGTAACAATGGGCCCATTTTCTCCTCTGGATGAACAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000339485.4 |
||
| 3UTR TCA 72 bp | AAACAGAAACTCACACCCTGGCTAAAGAGGGTGCCCTaGACTCCAGGCAAGCTTGGCCAAGTCTTGCCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: KQKLTPWLKRVP*TPGKLGQVLPE Trigger: TTCTGGCAAGACTTGGCCAAGCTTGCCTGGAGTTCAGGGCACCCTCTTTAGCCAGGGTGTGAGTTTCTGTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339485.4 |
||
| 3UTR-3UTR CAA 90 bp | TTCCCCCAGAATTGGAAGTGGCCCTGGCCCTCCAGACCCGGAGTGTGTTCCCTTATAAAAAGGAGACAGTaGCATGCTACAAAAGCTAGG | + |
|
Preference number: 3 (lower is better) Translates to: FPQNWKWPWPSRPGVCSLIKRRQ*HATKAR Trigger: CCTAGCTTTTGTAGCATGCAACTGTCTCCTTTTTAT...AAGGGAACACACTCCGGGTCTGGAGGGCCAGGGCCACTTCCAATTCTGGGGGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000339485.4 |
||
| 3UTR CCA 72 bp | CTGGCTAAAGAGGGTGCCCTGAACTCCAGGCAAGCTTaGCCAAGTCTTGCCAGAAATCCAGATCTTTGTGTT | + |
|
Preference number: 3 (lower is better) Translates to: LAKEGALNSRQA*PSLARNPDLCV Trigger: AACACAAAGATCTGGATTTCTGGCAAGACTTGGCCAAGCTTGCCTGGAGTTCAGGGCACCCTCTTTAGCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339485.4 |
||
| 3UTR-3UTR CAA 90 bp | CTACACTCCCTAGATTCTACCTGGCCCAGCAGGACCCTACCAGGAGGCACAAATTCCAGATCTTTGTGTTaGCATTGCCAGGTTTTTAGC | + |
|
Preference number: 3 (lower is better) Translates to: LHSLDSTWPSRTLPGGTNSRSLC*HCQVFS Trigger: GCTAAAAACCTGGCAATGCAAACACAAAGATCTGGA...ATTTGTGCCTCCTGGTAGGGTCCTGCTGGGCCAGGTAGAATCTAGGGAGTGTAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000339485.4 |
||
| 3UTR-3UTR CAA 90 bp | TCCCTAGATTCTACCTGGCCCAGCAGGACCCTACCAGGAGGCACAAATAACACAAAGCTTGGCCAAGTCTaGCCAGAAATCCAGATCTTT | + |
|
Preference number: 3 (lower is better) Translates to: SLDSTWPSRTLPGGTNNTKLGQV*PEIQIF Trigger: AAAGATCTGGATTTCTGGCAAGACTTGGCCAAGCTT...TGTGTTATTTGTGCCTCCTGGTAGGGTCCTGCTGGGCCAGGTAGAATCTAGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339485.4 |
||
| 3UTR TCA 72 bp | CCAGAAAGGCACAGGAGTTTTCTCCTTTCCCTGGTTTaGCAACAAGCAAAGCACCCTGAATGTCCTGGGCTA | + |
|
Preference number: 3 (lower is better) Translates to: PERHRSFLLSLV*QQAKHPECPGL Trigger: TAGCCCAGGACATTCAGGGTGCTTTGCTTGTTGTCAAACCAGGGAAAGGAGAAAACTCCTGTGCCTTTCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339485.4 |
||
| 3UTR TCA 72 bp | TGGGTTAAACGTCTGCACCTGGCCTGTGGGCCTATTTaGAAACTTTTTGACTGTTCAGCCTGTTCTGATGCT | + |
|
Preference number: 3 (lower is better) Translates to: WVKRLHLACGPI*KLFDCSACSDA Trigger: AGCATCAGAACAGGCTGAACAGTCAAAAAGTTTTCAAATAGGCCCACAGGCCAGGTGCAGACGTTTAACCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000339485.4 |
||
| 3UTR GCA 72 bp | TGGCCAAGTCTTGCCAGAAATCCAGATCTTTGTGTTTaGATTGCCAGGTTTTTAGCAAGGGTGACTGATTCA | + |
|
Preference number: 3 (lower is better) Translates to: WPSLARNPDLCV*IARFLARVTDS Trigger: TGAATCAGTCACCCTTGCTAAAAACCTGGCAATGCAAACACAAAGATCTGGATTTCTGGCAAGACTTGGCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000339485.4 |
||
| 3UTR GCA 72 bp | AAACAAACAAGAACACTTCTGTCTGGGTTAAACGTCTaGACCTGGCCTGTGGGCCTATTTGAAAACTTTTTG | + |
|
Preference number: 3 (lower is better) Translates to: KQTRTLLSGLNV*TWPVGLFENFL Trigger: CAAAAAGTTTTCAAATAGGCCCACAGGCCAGGTGCAGACGTTTAACCCAGACAGAAGTGTTCTTGTTTGTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000339485.4 |
||
| 3UTR-3UTR CAA 90 bp | TGTGTTTGCATTGCCAGGTTTTTAGCAAGGGTGACTGATTCAAAGCTTAAAAACCTATTTGAAAACTTTTaGACTGTTCAGCCTGTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: CVCIARFLARVTDSKLKNLFENF*TVQPVL Trigger: CAGAACAGGCTGAACAGTCAAAAAGTTTTCAAATAG...GTTTTTAAGCTTTGAATCAGTCACCCTTGCTAAAAACCTGGCAATGCAAACACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000339485.4 |
||
| CDS-3UTR GCA 90 bp | CAACCTCCGCCTCCCGGGTTCAGTAGCTGGGATTACAGGCACCCGCCACCAAGCAGGGCGGCGCGCAGCTaGTGGTCGTGGAGGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QPPPPGFSSWDYRHPPPSRAARS*WSWRAR Trigger: CCTGGCCCTCCACGACCAGCAGCTGCGCGCCGCCCT...GCTTGGTGGCGGGTGCCTGTAATCCCAGCTACTGAACCCGGGAGGCGGAGGTTG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339485.4 |
||
| CDS-3UTR TCA 90 bp | GCCTCCGACCTTTCTGGTCTGAAACAGGCTGTGCCCCTCGCCGGTTCCTGGTGTAGGCGGGCGCCATCCTaGAGGCCGTGGGTGGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ASDLSGLKQAVPLAGSWCRRAPS*RPWVAS Trigger: GGAGGCCACCCACGGCCTTCAGGATGGCGCCCGCCT...ACACCAGGAACCGGCGAGGGGCACAGCCTGTTTCAGACCAGAAAGGTCGGAGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339485.4 |
||
| CDS-3UTR TCA 90 bp | CCAGCAGGACCCTACCAGGAGGCACAAATAACACAGAGGGCCTCCCTCTTGCCCCCGACCAGGCCAGGGTaGCAGGCTGGCCCAGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: PAGPYQEAQITQRASLLPPTRPG*QAGPER Trigger: CCTTTCTGGGCCAGCCTGTCACCCTGGCCTGGTCGG...GGGCAAGAGGGAGGCCCTCTGTGTTATTTGTGCCTCCTGGTAGGGTCCTGCTGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000339485.4 |
||
| CDS-3UTR CCA 90 bp | ACTCACACCCTGGCTAAAGAGGGTGCCCTGAACTCCAGGCAAGCTTGGCCAAGTGCCAGGCGCTCGGCTTaGGCGTGCACCGTGCGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: THTLAKEGALNSRQAWPSARRSA*ACTVRS Trigger: GGAGCGCACGGTGCACGCCCAAGCCGAGCGCCTGGC...ACTTGGCCAAGCTTGCCTGGAGTTCAGGGCACCCTCTTTAGCCAGGGTGTGAGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339485.4 |
||
| CDS-3UTR CCA 90 bp | GCCTCCGACCTTTCTGGTCTGAAACAGGCTGTGCCCCTCGCCGGTTCCTGGTGTGAGGAGGTAGGGGAATaGCTGCCGACCAGGCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: ASDLSGLKQAVPLAGSWCEEVGE*LPTRPG Trigger: CCCTGGCCTGGTCGGCAGCCATTCCCCTACCTCCTC...ACACCAGGAACCGGCGAGGGGCACAGCCTGTTTCAGACCAGAAAGGTCGGAGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000339485.4 |
||
| CDS-3UTR GCA 90 bp | CTACACTCCCTAGATTCTACCTGGCCCAGCAGGACCCTACCAGGAGGCACAAATCTTGGGCGTGCACCGTaGGCTCCGCCGCGTCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LHSLDSTWPSRTLPGGTNLGRAP*APPRPA Trigger: GGCTGGACGCGGCGGAGCGCACGGTGCACGCCCAAG...ATTTGTGCCTCCTGGTAGGGTCCTGCTGGGCCAGGTAGAATCTAGGGAGTGTAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339485.4 |
||
| CDS-3UTR GCA 90 bp | CCTACACTCCCTAGATTCTACCTGGCCCAGCAGGACCCTACCAGGAGGCACAAACGGCGGCAGATGTCCTaGAGCAGCTCAGCCCGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PTLPRFYLAQQDPTRRHKRRQMS*SSSARG Trigger: GCCCCGGGCTGAGCTGCTGCAGGACATCTGCCGCCG...TTTGTGCCTCCTGGTAGGGTCCTGCTGGGCCAGGTAGAATCTAGGGAGTGTAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339485.4 |
||
| CDS-3UTR TCA 90 bp | GCCTCCGACCTTTCTGGTCTGAAACAGGCTGTGCCCCTCGCCGGTTCCTGGTGTCCTGCAGGGTGCTGGTaGCTCCCAAGGACACTGACA | + |
|
Preference number: 4 (lower is better) Translates to: ASDLSGLKQAVPLAGSWCPAGCW*LPRTLT Trigger: TGTCAGTGTCCTTGGGAGTCACCAGCACCCTGCAGG...ACACCAGGAACCGGCGAGGGGCACAGCCTGTTTCAGACCAGAAAGGTCGGAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339485.4 |
||
| CDS-3UTR GCA 90 bp | TCCCTAGATTCTACCTGGCCCAGCAGGACCCTACCAGGAGGCACAAATAACACATCCGCTGCGCGCCGGTaGACGGCTGCCAGGTGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: SLDSTWPSRTLPGGTNNTSAARR*TAARCA Trigger: CGCACACCTGGCAGCCGTGCACCGGCGCGCAGCGGA...TGTGTTATTTGTGCCTCCTGGTAGGGTCCTGCTGGGCCAGGTAGAATCTAGGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339485.4 |
||
| CDS-3UTR GCA 90 bp | GCCTCCGACCTTTCTGGTCTGAAACAGGCTGTGCCCCTCGCCGGTTCCTGGTGTCCGCCTCTTCCCCAGTaGTGTTGTCAAGGGGTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: ASDLSGLKQAVPLAGSWCPPLPQ*CCQGVD Trigger: GTCCACCCCTTGACAACAGCACTGGGGAAGAGGCGG...ACACCAGGAACCGGCGAGGGGCACAGCCTGTTTCAGACCAGAAAGGTCGGAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000339485.4 |
||
| CDS-3UTR CCA 90 bp | TTCCCCCAGAATTGGAAGTGGCCCTGGCCCTCCAGACCCGGAGTGTGTTCCCTTCCCCAGAATTGGAAGTaGCCCTGGCCCTCCAGACCC | + |
|
Preference number: 4 (lower is better) Translates to: FPQNWKWPWPSRPGVCSLPQNWK*PWPSRP Trigger: GGGTCTGGAGGGCCAGGGCCACTTCCAATTCTGGGG...AAGGGAACACACTCCGGGTCTGGAGGGCCAGGGCCACTTCCAATTCTGGGGGAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000339485.4 |
||
| CDS-3UTR TCA 90 bp | TTCCCCCAGAATTGGAAGTGGCCCTGGCCCTCCAGACCCGGAGTGTGTTCCCTTGTGGTCTCGAACTCCTaGCCTCAGGTGATCCACCCG | + |
|
Preference number: 4 (lower is better) Translates to: FPQNWKWPWPSRPGVCSLVVSNS*PQVIHP Trigger: CGGGTGGATCACCTGAGGTCAGGAGTTCGAGACCAC...AAGGGAACACACTCCGGGTCTGGAGGGCCAGGGCCACTTCCAATTCTGGGGGAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000339485.4 |
||
| CDS-3UTR GCA 90 bp | CTACACTCCCTAGATTCTACCTGGCCCAGCAGGACCCTACCAGGAGGCACAAATGCCGTAGGGTCCCCCTaGAGGGTGCTGGTGACTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LHSLDSTWPSRTLPGGTNAVGSP*RVLVTP Trigger: GGGAGTCACCAGCACCCTGCAGGGGGACCCTACGGC...ATTTGTGCCTCCTGGTAGGGTCCTGCTGGGCCAGGTAGAATCTAGGGAGTGTAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000339485.4 |
||
| CDS-3UTR CCA 90 bp | CCAGCAGGACCCTACCAGGAGGCACAAATAACACAGAGGGCCTCCCTCTTGCCCCCCGGGTTCAGTAGCTaGGATTACAGGCACCCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PAGPYQEAQITQRASLLPPGFSS*DYRHPP Trigger: TGGCGGGTGCCTGTAATCCCAGCTACTGAACCCGGG...GGGCAAGAGGGAGGCCCTCTGTGTTATTTGTGCCTCCTGGTAGGGTCCTGCTGG 61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000339485.4 |
||
| CDS-3UTR TCA 90 bp | GCCTCCGACCTTTCTGGTCTGAAACAGGCTGTGCCCCTCGCCGGTTCCTGGTGTCATCCGGTTTATTCTTaGGCACAGACAGGCCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ASDLSGLKQAVPLAGSWCHPVYS*AQTGPS Trigger: GCTGGGGCCTGTCTGTGCTCAAGAATAAACCGGATG...ACACCAGGAACCGGCGAGGGGCACAGCCTGTTTCAGACCAGAAAGGTCGGAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000339485.4 |
||
| CDS-3UTR GCA 90 bp | TCCCTAGATTCTACCTGGCCCAGCAGGACCCTACCAGGAGGCACAAATAACACAGCGCCGGTGCACGGCTaGCAGGTGTGCGTTTGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SLDSTWPSRTLPGGTNNTAPVHG*QVCVCL Trigger: GAGGCAAACGCACACCTGGCAGCCGTGCACCGGCGC...TGTGTTATTTGTGCCTCCTGGTAGGGTCCTGCTGGGCCAGGTAGAATCTAGGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339485.4 |
||
| CDS-3UTR CCA 90 bp | TTCCCCCAGAATTGGAAGTGGCCCTGGCCCTCCAGACCCGGAGTGTGTTCCCTTGCTGCTCCTGGAGTGTaGCAATCTCACGGTCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: FPQNWKWPWPSRPGVCSLAAPGV*QSHGPW Trigger: CCAAGGACCGTGAGATTGCCACACTCCAGGAGCAGC...AAGGGAACACACTCCGGGTCTGGAGGGCCAGGGCCACTTCCAATTCTGGGGGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000339485.4 |
||
| CDS-3UTR CCA 90 bp | ACTCACACCCTGGCTAAAGAGGGTGCCCTGAACTCCAGGCAAGCTTGGCCAAGTATGAGCTCGTCCCTCTaGTGCACGGTGGCCTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: THTLAKEGALNSRQAWPSMSSSL*CTVACR Trigger: CCTGCAGGCCACCGTGCACCAGAGGGACGAGCTCAT...ACTTGGCCAAGCTTGCCTGGAGTTCAGGGCACCCTCTTTAGCCAGGGTGTGAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339485.4 |
||
| CDS-3UTR CCA 90 bp | CCTACACTCCCTAGATTCTACCTGGCCCAGCAGGACCCTACCAGGAGGCACAAACCAAACACTGCAGGCTaGAGGTGGTCCCTGTCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: PTLPRFYLAQQDPTRRHKPNTAG*RWSLSA Trigger: GGCGGACAGGGACCACCTCCAGCCTGCAGTGTTTGG...TTTGTGCCTCCTGGTAGGGTCCTGCTGGGCCAGGTAGAATCTAGGGAGTGTAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339485.4 |
||
| CDS-3UTR TCA 90 bp | TTCCCCCAGAATTGGAAGTGGCCCTGGCCCTCCAGACCCGGAGTGTGTTCCCTTGACTCCCAAGGACACTaGCAGCAGTGGCTTTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: FPQNWKWPWPSRPGVCSLDSQGH*QQWLSV Trigger: GACAGAAAGCCACTGCTGTCAGTGTCCTTGGGAGTC...AAGGGAACACACTCCGGGTCTGGAGGGCCAGGGCCACTTCCAATTCTGGGGGAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000339485.4 |
||
| CDS-3UTR GCA 90 bp | CACTCCCTAGATTCTACCTGGCCCAGCAGGACCCTACCAGGAGGCACAAATAACTGCCAGGTGTGCGTTTaGCTCCCGGATCTGCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: HSLDSTWPSRTLPGGTNNCQVCV*LPDLQG Trigger: GCCCTGCAGATCCGGGAGGCAAACGCACACCTGGCA...GTTATTTGTGCCTCCTGGTAGGGTCCTGCTGGGCCAGGTAGAATCTAGGGAGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339485.4 |
||
| CDS-3UTR GCA 90 bp | GCCTCCGACCTTTCTGGTCTGAAACAGGCTGTGCCCCTCGCCGGTTCCTGGTGTTGGGCCCATTGTTACTaGACTGAGGGGTCACTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: ASDLSGLKQAVPLAGSWCWAHCY*TEGSLL Trigger: CAACAGTGACCCCTCAGTGCAGTAACAATGGGCCCA...ACACCAGGAACCGGCGAGGGGCACAGCCTGTTTCAGACCAGAAAGGTCGGAGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000339485.4 |
||
| CDS-3UTR TCA 90 bp | GCCTCCGACCTTTCTGGTCTGAAACAGGCTGTGCCCCTCGCCGGTTCCTGGTGTCTAAGGTCAGGAGTTTaGGACCAGCCTGGTCAACAT | + |
|
Preference number: 4 (lower is better) Translates to: ASDLSGLKQAVPLAGSWCLRSGV*DQPGQH Trigger: ATGTTGACCAGGCTGGTCTCAAACTCCTGACCTTAG...ACACCAGGAACCGGCGAGGGGCACAGCCTGTTTCAGACCAGAAAGGTCGGAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339485.4 |
||
| CDS-3UTR GCA 90 bp | TCCCTAGATTCTACCTGGCCCAGCAGGACCCTACCAGGAGGCACAAATAACACACACGGCTGCCAGGTGTaGGTTTGCCTCCCGGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: SLDSTWPSRTLPGGTNNTHGCQV*VCLPDL Trigger: CAGATCCGGGAGGCAAACGCACACCTGGCAGCCGTG...TGTGTTATTTGTGCCTCCTGGTAGGGTCCTGCTGGGCCAGGTAGAATCTAGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339485.4 |
||
| CDS-3UTR GCA 90 bp | CCTACACTCCCTAGATTCTACCTGGCCCAGCAGGACCCTACCAGGAGGCACAAATGTGGTCCCAAACACTaGAGGCTGGAGGTGGTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: PTLPRFYLAQQDPTRRHKCGPKH*RLEVVP Trigger: AGGGACCACCTCCAGCCTGCAGTGTTTGGGACCACA...TTTGTGCCTCCTGGTAGGGTCCTGCTGGGCCAGGTAGAATCTAGGGAGTGTAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339485.4 |
||
| CDS-3UTR GCA 90 bp | CAACCTCCGCCTCCCGGGTTCAGTAGCTGGGATTACAGGCACCCGCCACCAAGCCTCCATTCTGTAATCTaGATTCCGGGCTCACACTGT | + |
|
Preference number: 4 (lower is better) Translates to: QPPPPGFSSWDYRHPPPSLHSVI*IPGSHC Trigger: ACAGTGTGAGCCCGGAATGCAGATTACAGAATGGAG...GCTTGGTGGCGGGTGCCTGTAATCCCAGCTACTGAACCCGGGAGGCGGAGGTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339485.4 |
||
| CDS-3UTR GCA 90 bp | CTACACTCCCTAGATTCTACCTGGCCCAGCAGGACCCTACCAGGAGGCACAAATACAGGACTTTGGCTCTaGCGTAGGGTCCCCCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LHSLDSTWPSRTLPGGTNTGLWL*RRVPLQ Trigger: CTGCAGGGGGACCCTACGGCAGAGCCAAAGTCCTGT...ATTTGTGCCTCCTGGTAGGGTCCTGCTGGGCCAGGTAGAATCTAGGGAGTGTAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000339485.4 |
||
| CDS-3UTR CCA 90 bp | ACTCACACCCTGGCTAAAGAGGGTGCCCTGAACTCCAGGCAAGCTTGGCCAAGTTCCGGGCTCACACTGTaGTCCCAAACACTGCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: THTLAKEGALNSRQAWPSSGLTL*SQTLQA Trigger: AGCCTGCAGTGTTTGGGACCACAGTGTGAGCCCGGA...ACTTGGCCAAGCTTGCCTGGAGTTCAGGGCACCCTCTTTAGCCAGGGTGTGAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339485.4 |
||
| CDS-3UTR CCA 90 bp | CCTACACTCCCTAGATTCTACCTGGCCCAGCAGGACCCTACCAGGAGGCACAAAGGCCTCCGACCTTTCTaGTCTGAAACAGGCTGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: PTLPRFYLAQQDPTRRHKGLRPF*SETGCA Trigger: GGCACAGCCTGTTTCAGACCAGAAAGGTCGGAGGCC...TTTGTGCCTCCTGGTAGGGTCCTGCTGGGCCAGGTAGAATCTAGGGAGTGTAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339485.4 |
||
| CDS-3UTR CCA 90 bp | GCCCTGAACTCCAGGCAAGCTTGGCCAAGTCTTGCCAGAAATCCAGATCTTTGTACACCGCGCCCGGCCTaGGCCTCACTTTCCACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: ALNSRQAWPSLARNPDLCTPRPA*ASLSTA Trigger: AGCTGTGGAAAGTGAGGCCCAGGCCGGGCGCGGTGT...ACAAAGATCTGGATTTCTGGCAAGACTTGGCCAAGCTTGCCTGGAGTTCAGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339485.4 |
||
| CDS-3UTR CCA 90 bp | CACTCCCTAGATTCTACCTGGCCCAGCAGGACCCTACCAGGAGGCACAAATAACAATTGGAAGTGGCCCTaGCCCTCCAGACCCGGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: HSLDSTWPSRTLPGGTNNNWKWP*PSRPGV Trigger: CACTCCGGGTCTGGAGGGCCAGGGCCACTTCCAATT...GTTATTTGTGCCTCCTGGTAGGGTCCTGCTGGGCCAGGTAGAATCTAGGGAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339485.4 |
||
| CDS-3UTR TCA 90 bp | CCAGCAGGACCCTACCAGGAGGCACAAATAACACAGAGGGCCTCCCTCTTGCCCCTCCTTTCCCTGGTTTaGCAACAAGCAAAGCACCCT | + |
|
Preference number: 4 (lower is better) Translates to: PAGPYQEAQITQRASLLPLLSLV*QQAKHP Trigger: AGGGTGCTTTGCTTGTTGTCAAACCAGGGAAAGGAG...GGGCAAGAGGGAGGCCCTCTGTGTTATTTGTGCCTCCTGGTAGGGTCCTGCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339485.4 |
||
| CDS-3UTR TCA 90 bp | CCTACACTCCCTAGATTCTACCTGGCCCAGCAGGACCCTACCAGGAGGCACAAACCATTGTTACTGCACTaGGGGGTCACTGTTGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PTLPRFYLAQQDPTRRHKPLLLH*GVTVAR Trigger: CCTGGCAACAGTGACCCCTCAGTGCAGTAACAATGG...TTTGTGCCTCCTGGTAGGGTCCTGCTGGGCCAGGTAGAATCTAGGGAGTGTAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000339485.4 |
||
| CDS-3UTR GCA 90 bp | GCCCTGAACTCCAGGCAAGCTTGGCCAAGTCTTGCCAGAAATCCAGATCTTTGTTGGTGCACGGTGGCCTaGAGGCTGTGGACAGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: ALNSRQAWPSLARNPDLCWCTVA*RLWTVA Trigger: AGCCACTGTCCACAGCCTGCAGGCCACCGTGCACCA...ACAAAGATCTGGATTTCTGGCAAGACTTGGCCAAGCTTGCCTGGAGTTCAGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339485.4 |
||
| CDS-3UTR GCA 90 bp | GCCCTGAACTCCAGGCAAGCTTGGCCAAGTCTTGCCAGAAATCCAGATCTTTGTGCCCGGGGCTGCAACTaGCTAATGAGCTCGTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: ALNSRQAWPSLARNPDLCARGCN*LMSSSL Trigger: GAGGGACGAGCTCATTAGGCAGTTGCAGCCCCGGGC...ACAAAGATCTGGATTTCTGGCAAGACTTGGCCAAGCTTGCCTGGAGTTCAGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339485.4 |
||
| CDS-3UTR GCA 90 bp | TCCCTAGATTCTACCTGGCCCAGCAGGACCCTACCAGGAGGCACAAATAACACAAGCTCAGCCCGGGGCTaGAACTGCCTAATGAGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: SLDSTWPSRTLPGGTNNTSSARG*NCLMSS Trigger: CGAGCTCATTAGGCAGTTGCAGCCCCGGGCTGAGCT...TGTGTTATTTGTGCCTCCTGGTAGGGTCCTGCTGGGCCAGGTAGAATCTAGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339485.4 |
||
| CDS-3UTR CCA 90 bp | ACTCACACCCTGGCTAAAGAGGGTGCCCTGAACTCCAGGCAAGCTTGGCCAAGTGCAGGCTGTGGACAGTaGCTTCTGAGGTCATCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: THTLAKEGALNSRQAWPSAGCGQ*LLRSSA Trigger: AGCTGATGACCTCAGAAGCCACTGTCCACAGCCTGC...ACTTGGCCAAGCTTGCCTGGAGTTCAGGGCACCCTCTTTAGCCAGGGTGTGAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339485.4 |
||
| CDS-3UTR CCA 90 bp | GCCTCCGACCTTTCTGGTCTGAAACAGGCTGTGCCCCTCGCCGGTTCCTGGTGTTTAAACGTCTGCACCTaGCCTGTGGGCCTATTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: ASDLSGLKQAVPLAGSWCLNVCT*PVGLFE Trigger: TTCAAATAGGCCCACAGGCCAGGTGCAGACGTTTAA...ACACCAGGAACCGGCGAGGGGCACAGCCTGTTTCAGACCAGAAAGGTCGGAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339485.4 |
||
| CDS-3UTR CCA 90 bp | GCCCTGAACTCCAGGCAAGCTTGGCCAAGTCTTGCCAGAAATCCAGATCTTTGTCCTGAAGGCCGTGGGTaGCCTCCGACCTTTCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: ALNSRQAWPSLARNPDLCPEGRG*PPTFLV Trigger: GACCAGAAAGGTCGGAGGCCACCCACGGCCTTCAGG...ACAAAGATCTGGATTTCTGGCAAGACTTGGCCAAGCTTGCCTGGAGTTCAGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339485.4 |
||
| CDS-3UTR TCA 90 bp | TCCCTAGATTCTACCTGGCCCAGCAGGACCCTACCAGGAGGCACAAATAACACAGTGGACAGTGGCTTCTaGGGTCATCAGCTGCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SLDSTWPSRTLPGGTNNTVDSGF*GHQLLL Trigger: CAGGAGCAGCTGATGACCTCAGAAGCCACTGTCCAC...TGTGTTATTTGTGCCTCCTGGTAGGGTCCTGCTGGGCCAGGTAGAATCTAGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339485.4 |
||
| CDS-3UTR TCA 90 bp | CCAGCAGGACCCTACCAGGAGGCACAAATAACACAGAGGGCCTCCCTCTTGCCCCTGTTCAGCCTGTTCTaGTGCTTAGACAGGACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: PAGPYQEAQITQRASLLPLFSLF*CLDRTL Trigger: CAAAGTCCTGTCTAAGCATCAGAACAGGCTGAACAG...GGGCAAGAGGGAGGCCCTCTGTGTTATTTGTGCCTCCTGGTAGGGTCCTGCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339485.4 |
||
| CDS-3UTR TCA 90 bp | GCCCTGAACTCCAGGCAAGCTTGGCCAAGTCTTGCCAGAAATCCAGATCTTTGTCCGACCTTTCTGGTCTaGAACAGGCTGTGCCCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: ALNSRQAWPSLARNPDLCPTFLV*NRLCPS Trigger: CGAGGGGCACAGCCTGTTTCAGACCAGAAAGGTCGG...ACAAAGATCTGGATTTCTGGCAAGACTTGGCCAAGCTTGCCTGGAGTTCAGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339485.4 |
||
| CDS-3UTR GCA 90 bp | CTACACTCCCTAGATTCTACCTGGCCCAGCAGGACCCTACCAGGAGGCACAAATACCCGCATCCCAAAGTaGTGGGATTACAGGCGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LHSLDSTWPSRTLPGGTNTRIPK*WDYRRE Trigger: CTCACGCCTGTAATCCCAGCACTTTGGGATGCGGGT...ATTTGTGCCTCCTGGTAGGGTCCTGCTGGGCCAGGTAGAATCTAGGGAGTGTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339485.4 |
||
| CDS-3UTR TCA 90 bp | GCCTCCGACCTTTCTGGTCTGAAACAGGCTGTGCCCCTCGCCGGTTCCTGGTGTGCCTGTGGGCCTATTTaGAAACTTTTTGACTGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: ASDLSGLKQAVPLAGSWCACGPI*KLFDCS Trigger: TGAACAGTCAAAAAGTTTTCAAATAGGCCCACAGGC...ACACCAGGAACCGGCGAGGGGCACAGCCTGTTTCAGACCAGAAAGGTCGGAGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000339485.4 |
||
| CDS-3UTR TCA 90 bp | ACTCACACCCTGGCTAAAGAGGGTGCCCTGAACTCCAGGCAAGCTTGGCCAAGTACAAGCAAAGCACCCTaGATGTCCTGGGCTAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: THTLAKEGALNSRQAWPSTSKAP*MSWAKK Trigger: CTTCTTAGCCCAGGACATTCAGGGTGCTTTGCTTGT...ACTTGGCCAAGCTTGCCTGGAGTTCAGGGCACCCTCTTTAGCCAGGGTGTGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339485.4 |
||
| CDS-3UTR GCA 90 bp | CCAGCAGGACCCTACCAGGAGGCACAAATAACACAGAGGGCCTCCCTCTTGCCCAGCTTGGCCAAGTCTTaGCAGAAATCCAGATCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: PAGPYQEAQITQRASLLPSLAKS*QKSRSL Trigger: CAAAGATCTGGATTTCTGGCAAGACTTGGCCAAGCT...GGGCAAGAGGGAGGCCCTCTGTGTTATTTGTGCCTCCTGGTAGGGTCCTGCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339485.4 |
||
| CDS-3UTR CCA 90 bp | TCCCTAGATTCTACCTGGCCCAGCAGGACCCTACCAGGAGGCACAAATAACACACAATCTCACGGTCCTTaGCGCGACCCAGTTCGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: SLDSTWPSRTLPGGTNNTQSHGP*RDPVRL Trigger: TAGACGAACTGGGTCGCGCCAAGGACCGTGAGATTG...TGTGTTATTTGTGCCTCCTGGTAGGGTCCTGCTGGGCCAGGTAGAATCTAGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339485.4 |
||
| CDS-3UTR CCA 90 bp | TCTGGGTTAAACGTCTGCACCTGGCCTGTGGGCCTATTTGAAAACTTTTTGACTCCCTCTGGTGCACGGTaGCCTGCAGGCTGTGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: SGLNVCTWPVGLFENFLTPSGAR*PAGCGQ Trigger: CTGTCCACAGCCTGCAGGCCACCGTGCACCAGAGGG...AGTCAAAAAGTTTTCAAATAGGCCCACAGGCCAGGTGCAGACGTTTAACCCAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000339485.4 |
||
| CDS-3UTR GCA 90 bp | GCCTCCGACCTTTCTGGTCTGAAACAGGCTGTGCCCCTCGCCGGTTCCTGGTGTCCAGATCTTTGTGTTTaGATTGCCAGGTTTTTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: ASDLSGLKQAVPLAGSWCPDLCV*IARFLA Trigger: TGCTAAAAACCTGGCAATGCAAACACAAAGATCTGG...ACACCAGGAACCGGCGAGGGGCACAGCCTGTTTCAGACCAGAAAGGTCGGAGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000339485.4 |
||
| CDS-3UTR GCA 90 bp | TCCCTAGATTCTACCTGGCCCAGCAGGACCCTACCAGGAGGCACAAATAACACAGCTGGAGTGCAGTGGTaGAATCTCCACTCACTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: SLDSTWPSRTLPGGTNNTAGVQW*NLHSLQ Trigger: TTGCAGTGAGTGGAGATTGCACCACTGCACTCCAGC...TGTGTTATTTGTGCCTCCTGGTAGGGTCCTGCTGGGCCAGGTAGAATCTAGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339485.4 |
||
| CDS-3UTR TCA 90 bp | AACGTCTGCACCTGGCCTGTGGGCCTATTTGAAAACTTTTTGACTGTTCAGCCTCTAAAGAGGGTGCCCTaGACTCCAGGCAAGCTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: NVCTWPVGLFENFLTVQPLKRVP*TPGKLG Trigger: GCCAAGCTTGCCTGGAGTTCAGGGCACCCTCTTTAG...AGGCTGAACAGTCAAAAAGTTTTCAAATAGGCCCACAGGCCAGGTGCAGACGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000339485.4 |
||
| CDS-3UTR TCA 90 bp | CCTACACTCCCTAGATTCTACCTGGCCCAGCAGGACCCTACCAGGAGGCACAAATCCACAGCTGTAAAATaGGGACAAAGCCTGTGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: PTLPRFYLAQQDPTRRHKSTAVK*GQSLCL Trigger: TAGACACAGGCTTTGTCCTCATTTTACAGCTGTGGA...TTTGTGCCTCCTGGTAGGGTCCTGCTGGGCCAGGTAGAATCTAGGGAGTGTAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339485.4 |
||
| CDS-3UTR GCA 90 bp | TGTGTTTGCATTGCCAGGTTTTTAGCAAGGGTGACTGATTCAAAGCTTAAAAACTTTGCCTCCCGGATCTaGAGGGCCGGCGGCGCCGAC | + |
|
Preference number: 4 (lower is better) Translates to: CVCIARFLARVTDSKLKNFASRI*RAGGAD Trigger: GTCGGCGCCGCCGGCCCTGCAGATCCGGGAGGCAAA...GTTTTTAAGCTTTGAATCAGTCACCCTTGCTAAAAACCTGGCAATGCAAACACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000339485.4 |
||
| CDS-3UTR GCA 90 bp | TCCCTAGATTCTACCTGGCCCAGCAGGACCCTACCAGGAGGCACAAATAACACAAGACAGGCCCCAGCCTaGCTTTCCTTTGTACAAACA | + |
|
Preference number: 4 (lower is better) Translates to: SLDSTWPSRTLPGGTNNTRQAPA*LSFVQT Trigger: TGTTTGTACAAAGGAAAGGCAGGCTGGGGCCTGTCT...TGTGTTATTTGTGCCTCCTGGTAGGGTCCTGCTGGGCCAGGTAGAATCTAGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339485.4 |
||
| CDS-3UTR CCA 90 bp | CACTCCCTAGATTCTACCTGGCCCAGCAGGACCCTACCAGGAGGCACAAATAACAACTCCAGGCAAGCTTaGCCAAGTCTTGCCAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: HSLDSTWPSRTLPGGTNNNSRQA*PSLARN Trigger: ATTTCTGGCAAGACTTGGCCAAGCTTGCCTGGAGTT...GTTATTTGTGCCTCCTGGTAGGGTCCTGCTGGGCCAGGTAGAATCTAGGGAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339485.4 |
||
| CDS-3UTR TCA 90 bp | TCTGGGTTAAACGTCTGCACCTGGCCTGTGGGCCTATTTGAAAACTTTTTGACTACTCCTGACCTCAGGTaGTCCACCCGCATCCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SGLNVCTWPVGLFENFLTTPDLR*STRIPK Trigger: CTTTGGGATGCGGGTGGATCACCTGAGGTCAGGAGT...AGTCAAAAAGTTTTCAAATAGGCCCACAGGCCAGGTGCAGACGTTTAACCCAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000339485.4 |
||
| CDS-3UTR GCA 90 bp | AACGTCTGCACCTGGCCTGTGGGCCTATTTGAAAACTTTTTGACTGTTCAGCCTTCTGGGTTAAACGTCTaGACCTGGCCTGTGGGCCTA | + |
|
Preference number: 4 (lower is better) Translates to: NVCTWPVGLFENFLTVQPSGLNV*TWPVGL Trigger: TAGGCCCACAGGCCAGGTGCAGACGTTTAACCCAGA...AGGCTGAACAGTCAAAAAGTTTTCAAATAGGCCCACAGGCCAGGTGCAGACGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000339485.4 |
||
| CDS-3UTR GCA 90 bp | TGTGTTTGCATTGCCAGGTTTTTAGCAAGGGTGACTGATTCAAAGCTTAAAAACCTGAGGGGTCACTGTTaGCAGGCAGGCAGGCGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: CVCIARFLARVTDSKLKNLRGHC*QAGRRA Trigger: CGCCCGCCTGCCTGCCTGGCAACAGTGACCCCTCAG...GTTTTTAAGCTTTGAATCAGTCACCCTTGCTAAAAACCTGGCAATGCAAACACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000339485.4 |
||
| CDS-3UTR CCA 90 bp | TCCCTAGATTCTACCTGGCCCAGCAGGACCCTACCAGGAGGCACAAATAACACAAAGAACACTTCTGTCTaGGTTAAACGTCTGCACCTG | + |
|
Preference number: 4 (lower is better) Translates to: SLDSTWPSRTLPGGTNNTKNTSV*VKRLHL Trigger: CAGGTGCAGACGTTTAACCCAGACAGAAGTGTTCTT...TGTGTTATTTGTGCCTCCTGGTAGGGTCCTGCTGGGCCAGGTAGAATCTAGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339485.4 |
||
| CDS-3UTR CCA 90 bp | GCCCTGAACTCCAGGCAAGCTTGGCCAAGTCTTGCCAGAAATCCAGATCTTTGTTTCCCTTCACACCTCTaGGCCTCTGTTTGTTGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: ALNSRQAWPSLARNPDLCFPSHL*ASVCCC Trigger: ACAACAACAAACAGAGGCCCAGAGGTGTGAAGGGAA...ACAAAGATCTGGATTTCTGGCAAGACTTGGCCAAGCTTGCCTGGAGTTCAGGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339485.4 |
||
| CDS-3UTR CCA 90 bp | GCCCTGAACTCCAGGCAAGCTTGGCCAAGTCTTGCCAGAAATCCAGATCTTTGTATCCAGAGGAGAAAATaGGCCCATTGTTACTGCACT | + |
|
Preference number: 4 (lower is better) Translates to: ALNSRQAWPSLARNPDLCIQRRK*AHCYCT Trigger: AGTGCAGTAACAATGGGCCCATTTTCTCCTCTGGAT...ACAAAGATCTGGATTTCTGGCAAGACTTGGCCAAGCTTGCCTGGAGTTCAGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339485.4 |
||
| 3UTR CAA 72 bp | GTCTGCACCTGGCCTGTGGGCCTATTTGAAAACTTTTaGACTGTTCAGCCTGTTCTGATGCTTAGACAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: VCTWPVGLFENF*TVQPVLMLRQD Trigger: GTCCTGTCTAAGCATCAGAACAGGCTGAACAGTCAAAAAGTTTTCAAATAGGCCCACAGGCCAGGTGCAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000339485.4 |
||
| 3UTR CAA 72 bp | GCAAGCTTGGCCAAGTCTTGCCAGAAATCCAGATCTTaGTGTTTGCATTGCCAGGTTTTTAGCAAGGGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: ASLAKSCQKSRS*CLHCQVFSKGD Trigger: GTCACCCTTGCTAAAAACCTGGCAATGCAAACACAAAGATCTGGATTTCTGGCAAGACTTGGCCAAGCTTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000339485.4 |
||
| 3UTR CAA 72 bp | CCGGAGTGTGTTCCCTTCACACCTCTGGGCCTCTGTTaGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: PECVPFTPLGLC*LLLLLLLLLLL Trigger: CAACAACAACAACAACAACAACAACAACAACAACAAACAGAGGCCCAGAGGTGTGAAGGGAACACACTCCGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339485.4 |
||
| CDS-3UTR CCA 90 bp | AACGTCTGCACCTGGCCTGTGGGCCTATTTGAAAACTTTTTGACTGTTCAGCCTGTTTTCTCCTTTCCCTaGTTTGACAACAAGCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: NVCTWPVGLFENFLTVQPVFSFP*FDNKQS Trigger: GCTTTGCTTGTTGTCAAACCAGGGAAAGGAGAAAAC...AGGCTGAACAGTCAAAAAGTTTTCAAATAGGCCCACAGGCCAGGTGCAGACGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000339485.4 |
||
| CDS-3UTR GCA 90 bp | TGTGTTTGCATTGCCAGGTTTTTAGCAAGGGTGACTGATTCAAAGCTTAAAAACTCTGAGGTCATCAGCTaGTCCTGGAGTGTGGCAATC | + |
|
Preference number: 4 (lower is better) Translates to: CVCIARFLARVTDSKLKNSEVIS*SWSVAI Trigger: GATTGCCACACTCCAGGAGCAGCTGATGACCTCAGA...GTTTTTAAGCTTTGAATCAGTCACCCTTGCTAAAAACCTGGCAATGCAAACACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000339485.4 |
||
| 3UTR CAA 72 bp | TTCACACCTCTGGGCCTCTGTTTGTTGTTGTTGTTGTaGTTGTTGTTGTTGTTGTTGTTTTCTTTGAGACTG | + |
|
Preference number: 4 (lower is better) Translates to: FTPLGLCLLLLL*LLLLLLFSLRL Trigger: CAGTCTCAAAGAAAACAACAACAACAACAACAACAACAACAACAACAACAAACAGAGGCCCAGAGGTGTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339485.4 |
||
| CDS-3UTR GCA 90 bp | TGTGTTTGCATTGCCAGGTTTTTAGCAAGGGTGACTGATTCAAAGCTTAAAAACTCTTTGTGTTTGCATTaGCAGGTTTTTAGCAAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: CVCIARFLARVTDSKLKNSLCLH*QVFSKG Trigger: ACCCTTGCTAAAAACCTGGCAATGCAAACACAAAGA...GTTTTTAAGCTTTGAATCAGTCACCCTTGCTAAAAACCTGGCAATGCAAACACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000339485.4 |
||
| CDS GCA 90 bp | CGCTCCGCCGCGTCCAGCCGCGCCTCCAGCTCCGCTGCGCGCCGGTaGACGGCTGCCAGGTGTGCGTTTGCCTCCCGGATCTGCAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: RSAASSRASSSAARR*TAARCAFASRICRA Trigger: GGCCCTGCAGATCCGGGAGGCAAACGCACACCTGGCAGCCGTGCACCGGCGCGCAGCGGAGCTGGAGGCGCGGCTGGACGCGGCGGAGCG 77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339485.4 |
||
| CDS CCA 90 bp | TTGGCGCGACCCAGTTCGTCTAGGGCGGCGCGCAGCTGCTGGTCGTaGAGGGCCAGGCGCTCGGCTTGGGCGTGCACCGTGCGCTCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: LARPSSSRAARSCWS*RARRSAWACTVRSA Trigger: GGCGGAGCGCACGGTGCACGCCCAAGCCGAGCGCCTGGCCCTCCACGACCAGCAGCTGCGCGCCGCCCTAGACGAACTGGGTCGCGCCAA 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339485.4 |
||
| CDS CCA 90 bp | CGGTCCTTGGCGCGACCCAGTTCGTCTAGGGCGGCGCGCAGCTGCTaGTCGTGGAGGGCCAGGCGCTCGGCTTGGGCGTGCACCGTGCGC | + |
|
Preference number: 5 (lower is better) Translates to: RSLARPSSSRAARSC*SWRARRSAWACTVR Trigger: GCGCACGGTGCACGCCCAAGCCGAGCGCCTGGCCCTCCACGACCAGCAGCTGCGCGCCGCCCTAGACGAACTGGGTCGCGCCAAGGACCG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339485.4 |
||
| CDS GCA 90 bp | GGTGGCCGGCGGCGGCAGATGTCCTGCAGCAGCTCAGCCCGGGGCTaGAACTGCCTAATGAGCTCGTCCCTCTGGTGCACGGTGGCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: GGRRRQMSCSSSARG*NCLMSSSLWCTVAC Trigger: GCAGGCCACCGTGCACCAGAGGGACGAGCTCATTAGGCAGTTGCAGCCCCGGGCTGAGCTGCTGCAGGACATCTGCCGCCGCCGGCCACC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339485.4 |
||
| CDS-3UTR CAA 90 bp | GCCTCCGACCTTTCTGGTCTGAAACAGGCTGTGCCCCTCGCCGGTTCCTGGTGTGGCCAGGCGCTCGGCTaGGGCGTGCACCGTGCGCTC | + |
|
Preference number: 5 (lower is better) Translates to: ASDLSGLKQAVPLAGSWCGQALG*GVHRAL Trigger: GAGCGCACGGTGCACGCCCAAGCCGAGCGCCTGGCC...ACACCAGGAACCGGCGAGGGGCACAGCCTGTTTCAGACCAGAAAGGTCGGAGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339485.4 |
||
| CDS-3UTR CAA 90 bp | TTCCCCCAGAATTGGAAGTGGCCCTGGCCCTCCAGACCCGGAGTGTGTTCCCTTCCTGGGAGGCGGAGGTaGCAGTTAGCCAAAATCGCA | + |
|
Preference number: 5 (lower is better) Translates to: FPQNWKWPWPSRPGVCSLPGRRR*QLAKIA Trigger: TGCGATTTTGGCTAACTGCAACCTCCGCCTCCCAGG...AAGGGAACACACTCCGGGTCTGGAGGGCCAGGGCCACTTCCAATTCTGGGGGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000339485.4 |
||
| CDS-3UTR CAA 90 bp | TCCCTAGATTCTACCTGGCCCAGCAGGACCCTACCAGGAGGCACAAATAACACACTGCCAGGTGTGCGTTaGCCTCCCGGATCTGCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: SLDSTWPSRTLPGGTNNTLPGVR*PPGSAG Trigger: CCCTGCAGATCCGGGAGGCAAACGCACACCTGGCAG...TGTGTTATTTGTGCCTCCTGGTAGGGTCCTGCTGGGCCAGGTAGAATCTAGGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339485.4 |
||
| CDS GCA 90 bp | CATTCTGTAATCTGCATTCCGGGCTCACACTGTGGTCCCAAACACTaGAGGCTGGAGGTGGTCCCTGTCCGCCTCTTCCCCAGTGCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: HSVICIPGSHCGPKH*RLEVVPVRLFPSAV Trigger: AACAGCACTGGGGAAGAGGCGGACAGGGACCACCTCCAGCCTGCAGTGTTTGGGACCACAGTGTGAGCCCGGAATGCAGATTACAGAATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339485.4 |
||
| CDS-3UTR CAA 90 bp | TTCCCCCAGAATTGGAAGTGGCCCTGGCCCTCCAGACCCGGAGTGTGTTCCCTTGAACTCCAGGCAAGCTaGGCCAAGTCTTGCCAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: FPQNWKWPWPSRPGVCSLELQAS*AKSCQK Trigger: TTTCTGGCAAGACTTGGCCAAGCTTGCCTGGAGTTC...AAGGGAACACACTCCGGGTCTGGAGGGCCAGGGCCACTTCCAATTCTGGGGGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000339485.4 |
||
| CDS-3UTR CAA 90 bp | GCCTCCGACCTTTCTGGTCTGAAACAGGCTGTGCCCCTCGCCGGTTCCTGGTGTTCTCCTTTCCCTGGTTaGACAACAAGCAAAGCACCC | + |
|
Preference number: 5 (lower is better) Translates to: ASDLSGLKQAVPLAGSWCSPFPG*TTSKAP Trigger: GGGTGCTTTGCTTGTTGTCAAACCAGGGAAAGGAGA...ACACCAGGAACCGGCGAGGGGCACAGCCTGTTTCAGACCAGAAAGGTCGGAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339485.4 |
||
| CDS GCA 90 bp | CCAAGGACACTGACAGCAGTGGCTTTCTGTCTCCATTCTGTAATCTaGATTCCGGGCTCACACTGTGGTCCCAAACACTGCAGGCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: PRTLTAVAFCLHSVI*IPGSHCGPKHCRLE Trigger: CTCCAGCCTGCAGTGTTTGGGACCACAGTGTGAGCCCGGAATGCAGATTACAGAATGGAGACAGAAAGCCACTGCTGTCAGTGTCCTTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339485.4 |
||
| CDS-3UTR CAA 90 bp | AACGTCTGCACCTGGCCTGTGGGCCTATTTGAAAACTTTTTGACTGTTCAGCCTGCAATCTCACGGTCCTaGGCGCGACCCAGTTCGTCT | + |
|
Preference number: 5 (lower is better) Translates to: NVCTWPVGLFENFLTVQPAISRS*ARPSSS Trigger: AGACGAACTGGGTCGCGCCAAGGACCGTGAGATTGC...AGGCTGAACAGTCAAAAAGTTTTCAAATAGGCCCACAGGCCAGGTGCAGACGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000339485.4 |
||
| CDS-3UTR CAA 90 bp | CCAGCAGGACCCTACCAGGAGGCACAAATAACACAGAGGGCCTCCCTCTTGCCCTCCAGATCTTTGTGTTaGCATTGCCAGGTTTTTAGC | + |
|
Preference number: 5 (lower is better) Translates to: PAGPYQEAQITQRASLLPSRSLC*HCQVFS Trigger: GCTAAAAACCTGGCAATGCAAACACAAAGATCTGGA...GGGCAAGAGGGAGGCCCTCTGTGTTATTTGTGCCTCCTGGTAGGGTCCTGCTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000339485.4 |
||
| CDS-3UTR CAA 90 bp | GCCCTGAACTCCAGGCAAGCTTGGCCAAGTCTTGCCAGAAATCCAGATCTTTGTTCATCCGGTTTATTCTaGAGCACAGACAGGCCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: ALNSRQAWPSLARNPDLCSSGLF*STDRPQ Trigger: CTGGGGCCTGTCTGTGCTCAAGAATAAACCGGATGA...ACAAAGATCTGGATTTCTGGCAAGACTTGGCCAAGCTTGCCTGGAGTTCAGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339485.4 |
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| CDS-3UTR CAA 90 bp | ACTCACACCCTGGCTAAAGAGGGTGCCCTGAACTCCAGGCAAGCTTGGCCAAGTATAAAAAGGAGACAGTaGCATGCTACAAAAGCTAGG | + |
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Preference number: 5 (lower is better) Translates to: THTLAKEGALNSRQAWPSIKRRQ*HATKAR Trigger: CCTAGCTTTTGTAGCATGCAACTGTCTCCTTTTTAT...ACTTGGCCAAGCTTGCCTGGAGTTCAGGGCACCCTCTTTAGCCAGGGTGTGAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000339485.4 |
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| CDS-3UTR CAA 90 bp | TCTGGGTTAAACGTCTGCACCTGGCCTGTGGGCCTATTTGAAAACTTTTTGACTCTATTTGAAAACTTTTaGACTGTTCAGCCTGTTCTG | + |
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Preference number: 5 (lower is better) Translates to: SGLNVCTWPVGLFENFLTLFENF*TVQPVL Trigger: CAGAACAGGCTGAACAGTCAAAAAGTTTTCAAATAG...AGTCAAAAAGTTTTCAAATAGGCCCACAGGCCAGGTGCAGACGTTTAACCCAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000339485.4 |
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| CDS-3UTR CAA 90 bp | TGTGTTTGCATTGCCAGGTTTTTAGCAAGGGTGACTGATTCAAAGCTTAAAAACAAGCTTGGCCAAGTCTaGCCAGAAATCCAGATCTTT | + |
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Preference number: 5 (lower is better) Translates to: CVCIARFLARVTDSKLKNKLGQV*PEIQIF Trigger: AAAGATCTGGATTTCTGGCAAGACTTGGCCAAGCTT...GTTTTTAAGCTTTGAATCAGTCACCCTTGCTAAAAACCTGGCAATGCAAACACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000339485.4 |
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| CDS GCA 72 bp | CGTGGAGGGCCAGGCGCTCGGCTTGGGCGTGCACCGTaGGCTCCGCCGCGTCCAGCCGCGCCTCCAGCTCCG | + |
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Preference number: 6 (lower is better) Translates to: RGGPGARLGRAP*APPRPAAPPAP Trigger: CGGAGCTGGAGGCGCGGCTGGACGCGGCGGAGCGCACGGTGCACGCCCAAGCCGAGCGCCTGGCCCTCCACG 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339485.4 |
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| CDS CAA 90 bp | CCTCCAGCTCCGCTGCGCGCCGGTGCACGGCTGCCAGGTGTGCGTTaGCCTCCCGGATCTGCAGGGCCGGCGGCGCCGACATGGCCCAGG | + |
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Preference number: 6 (lower is better) Translates to: PPAPLRAGARLPGVR*PPGSAGPAAPTWPR Trigger: CCTGGGCCATGTCGGCGCCGCCGGCCCTGCAGATCCGGGAGGCAAACGCACACCTGGCAGCCGTGCACCGGCGCGCAGCGGAGCTGGAGG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339485.4 |
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| CDS GCA 72 bp | CAGCTCCGCTGCGCGCCGGTGCACGGCTGCCAGGTGTaGGTTTGCCTCCCGGATCTGCAGGGCCGGCGGCGC | + |
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Preference number: 6 (lower is better) Translates to: QLRCAPVHGCQV*VCLPDLQGRRR Trigger: GCGCCGCCGGCCCTGCAGATCCGGGAGGCAAACGCACACCTGGCAGCCGTGCACCGGCGCGCAGCGGAGCTG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339485.4 |
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| CDS CAA 72 bp | CCGCTGCGCGCCGGTGCACGGCTGCCAGGTGTGCGTTaGCCTCCCGGATCTGCAGGGCCGGCGGCGCCGACA | + |
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Preference number: 6 (lower is better) Translates to: PLRAGARLPGVR*PPGSAGPAAPT Trigger: TGTCGGCGCCGCCGGCCCTGCAGATCCGGGAGGCAAACGCACACCTGGCAGCCGTGCACCGGCGCGCAGCGG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339485.4 |
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| CDS GCA 72 bp | CGCTGCGCGCCGGTGCACGGCTGCCAGGTGTGCGTTTaGCTCCCGGATCTGCAGGGCCGGCGGCGCCGACAT | + |
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Preference number: 6 (lower is better) Translates to: RCAPVHGCQVCV*LPDLQGRRRRH Trigger: ATGTCGGCGCCGCCGGCCCTGCAGATCCGGGAGGCAAACGCACACCTGGCAGCCGTGCACCGGCGCGCAGCG 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339485.4 |
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| CDS CCA 72 bp | GCGCGACCCAGTTCGTCTAGGGCGGCGCGCAGCTGCTaGTCGTGGAGGGCCAGGCGCTCGGCTTGGGCGTGC | + |
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Preference number: 6 (lower is better) Translates to: ARPSSSRAARSC*SWRARRSAWAC Trigger: GCACGCCCAAGCCGAGCGCCTGGCCCTCCACGACCAGCAGCTGCGCGCCGCCCTAGACGAACTGGGTCGCGC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339485.4 |
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| CDS GCA 72 bp | TTGGCGCGACCCAGTTCGTCTAGGGCGGCGCGCAGCTaGTGGTCGTGGAGGGCCAGGCGCTCGGCTTGGGCG | + |
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Preference number: 6 (lower is better) Translates to: LARPSSSRAARS*WSWRARRSAWA Trigger: CGCCCAAGCCGAGCGCCTGGCCCTCCACGACCAGCAGCTGCGCGCCGCCCTAGACGAACTGGGTCGCGCCAA 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339485.4 |
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| CDS CCA 72 bp | CCCAGTTCGTCTAGGGCGGCGCGCAGCTGCTGGTCGTaGAGGGCCAGGCGCTCGGCTTGGGCGTGCACCGTG | + |
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Preference number: 6 (lower is better) Translates to: PSSSRAARSCWS*RARRSAWACTV Trigger: CACGGTGCACGCCCAAGCCGAGCGCCTGGCCCTCCACGACCAGCAGCTGCGCGCCGCCCTAGACGAACTGGG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339485.4 |
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| CDS GCA 72 bp | CAGGCTGGAGGTGGTCCCTGTCCGCCTCTTCCCCAGTaGTGTTGTCAAGGGGTGGACCAGGCCCACCGGGGG | + |
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Preference number: 6 (lower is better) Translates to: QAGGGPCPPLPQ*CCQGVDQAHRG Trigger: CCCCCGGTGGGCCTGGTCCACCCCTTGACAACAGCACTGGGGAAGAGGCGGACAGGGACCACCTCCAGCCTG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000339485.4 |
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| CDS CCA 72 bp | CCCTCTGGTGCACGGTGGCCTGCAGGCTGTGGACAGTaGCTTCTGAGGTCATCAGCTGCTCCTGGAGTGTGG | + |
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Preference number: 6 (lower is better) Translates to: PSGARWPAGCGQ*LLRSSAAPGVW Trigger: CCACACTCCAGGAGCAGCTGATGACCTCAGAAGCCACTGTCCACAGCCTGCAGGCCACCGTGCACCAGAGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339485.4 |
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| CDS CCA 72 bp | TTCCGGGCTCACACTGTGGTCCCAAACACTGCAGGCTaGAGGTGGTCCCTGTCCGCCTCTTCCCCAGTGCTG | + |
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Preference number: 6 (lower is better) Translates to: FRAHTVVPNTAG*RWSLSASSPVL Trigger: CAGCACTGGGGAAGAGGCGGACAGGGACCACCTCCAGCCTGCAGTGTTTGGGACCACAGTGTGAGCCCGGAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339485.4 |
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| CDS GCA 72 bp | ATCTGCATTCCGGGCTCACACTGTGGTCCCAAACACTaGAGGCTGGAGGTGGTCCCTGTCCGCCTCTTCCCC | + |
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Preference number: 6 (lower is better) Translates to: ICIPGSHCGPKH*RLEVVPVRLFP Trigger: GGGGAAGAGGCGGACAGGGACCACCTCCAGCCTGCAGTGTTTGGGACCACAGTGTGAGCCCGGAATGCAGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339485.4 |
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| CDS GCA 72 bp | TGCCTAATGAGCTCGTCCCTCTGGTGCACGGTGGCCTaGAGGCTGTGGACAGTGGCTTCTGAGGTCATCAGC | + |
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Preference number: 6 (lower is better) Translates to: CLMSSSLWCTVA*RLWTVASEVIS Trigger: GCTGATGACCTCAGAAGCCACTGTCCACAGCCTGCAGGCCACCGTGCACCAGAGGGACGAGCTCATTAGGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339485.4 |
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