Pregenerated sensors for VMA21 (Homo sapiens)
Ensembl gene IDs: ENSG00000160131Ensembl transcript IDs: ENST00000330374.7, ENST00000370361.5
Found 75 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACTTTTAGCATCGACGTCAAGAGACATCTCGTAACAGGTTCACTATaGAAAACTCAAATGAGAATGTGTGAACGTTCTTTGCAAACTGTA | + |
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Preference number: 1 (lower is better) Translates to: TFSIDVKRHLVTGSL*KTQMRMCERSLQTV Trigger: TACAGTTTGCAAAGAACGTTCACACATTCTCATTTGAGTTTTGCATAGTGAACCTGTTACGAGATGTCTCTTGACGTCGATGCTAAAAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330374.7 |
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| 3UTR CCA 90 bp | TATTACTTTCAAATACACATAGCAACAACACAGGCAAGGAAAGTGTaGCCAGGAGTGATGTCGAGGAATTCCTATTTTAAGGAATATATA | + |
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Preference number: 1 (lower is better) Translates to: YYFQIHIATTQARKV*PGVMSRNSYFKEYI Trigger: TATATATTCCTTAAAATAGGAATTCCTCGACATCACTCCTGGCCACACTTTCCTTGCCTGTGTTGTTGCTATGTGTATTTGAAAGTAATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330374.7 |
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| 3UTR TCA 90 bp | GATGTTGTTAGCTATTGCTATTATTACTGTTCAGTGAGATTACACTaGACGTGGGGAAAAGGAAGACTACTCTGTATAACTGACAAATAT | + |
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Preference number: 1 (lower is better) Translates to: DVVSYCYYYCSVRLH*TWGKGRLLCITDKY Trigger: ATATTTGTCAGTTATACAGAGTAGTCTTCCTTTTCCCCACGTTCAGTGTAATCTCACTGAACAGTAATAATAGCAATAGCTAACAACATC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330374.7 |
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| 3UTR CAA 90 bp | CTAGCTTCAATGTTGAATGAGGAAGCAAAGTATCTCATTAAAAAGTaGGTCTGCAAAGCACAAAGCTGGCCTGCAAGGGGACTTGAAGGA | + |
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Preference number: 2 (lower is better) Translates to: LASMLNEEAKYLIKK*VCKAQSWPARGLEG Trigger: TCCTTCAAGTCCCCTTGCAGGCCAGCTTTGTGCTTTGCAGACCAACTTTTTAATGAGATACTTTGCTTCCTCATTCAACATTGAAGCTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000330374.7 |
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| 3UTR-3UTR CCA 90 bp | GGTTCACTATGCAAAACTCAAATGAGAATGTGTGAACGTTCTTTGCAAACTGTAAAAATTAGCCAGGCGTaGTGGCAGGCATCCGTAGTC | + |
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Preference number: 2 (lower is better) Translates to: GSLCKTQMRMCERSLQTVKISQA*WQASVV Trigger: GACTACGGATGCCTGCCACCACGCCTGGCTAATTTT...TACAGTTTGCAAAGAACGTTCACACATTCTCATTTGAGTTTTGCATAGTGAACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000330374.7 |
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| 3UTR-3UTR CCA 90 bp | GGTTCACTATGCAAAACTCAAATGAGAATGTGTGAACGTTCTTTGCAAACTGTATGCAAAGCACAAAGCTaGCCTGCAAGGGGACTTGAA | + |
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Preference number: 2 (lower is better) Translates to: GSLCKTQMRMCERSLQTVCKAQS*PARGLE Trigger: TTCAAGTCCCCTTGCAGGCCAGCTTTGTGCTTTGCA...TACAGTTTGCAAAGAACGTTCACACATTCTCATTTGAGTTTTGCATAGTGAACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330374.7 |
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| 3UTR-3UTR GCA 90 bp | GGTTCACTATGCAAAACTCAAATGAGAATGTGTGAACGTTCTTTGCAAACTGTAGTCAGGTTACTAATGTaGTGCTTCAGCCAGCTCTTG | + |
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Preference number: 2 (lower is better) Translates to: GSLCKTQMRMCERSLQTVVRLLM*CFSQLL Trigger: CAAGAGCTGGCTGAAGCAGCACATTAGTAACCTGAC...TACAGTTTGCAAAGAACGTTCACACATTCTCATTTGAGTTTTGCATAGTGAACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330374.7 |
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| 3UTR-3UTR TCA 90 bp | GGTTCACTATGCAAAACTCAAATGAGAATGTGTGAACGTTCTTTGCAAACTGTACTGACCTCAGACAAGTaGCAAATTCTGTGTCAGAGT | + |
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Preference number: 2 (lower is better) Translates to: GSLCKTQMRMCERSLQTVLTSDK*QILCQS Trigger: ACTCTGACACAGAATTTGTCACTTGTCTGAGGTCAG...TACAGTTTGCAAAGAACGTTCACACATTCTCATTTGAGTTTTGCATAGTGAACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330374.7 |
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| 3UTR-3UTR TCA 90 bp | GGTTCACTATGCAAAACTCAAATGAGAATGTGTGAACGTTCTTTGCAAACTGTAGTGACCCTTTCCCCCTaGAAAGGGAAAAAGAAATCT | + |
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Preference number: 2 (lower is better) Translates to: GSLCKTQMRMCERSLQTVVTLSP*KGKKKS Trigger: AGATTTCTTTTTCCCTTTTCAGGGGGAAAGGGTCAC...TACAGTTTGCAAAGAACGTTCACACATTCTCATTTGAGTTTTGCATAGTGAACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000330374.7 |
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| 3UTR-3UTR TCA 90 bp | GGTTCACTATGCAAAACTCAAATGAGAATGTGTGAACGTTCTTTGCAAACTGTACTCGAACCTTTTAATTaGAGCCTAGCTTCAATGTTG | + |
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Preference number: 2 (lower is better) Translates to: GSLCKTQMRMCERSLQTVLEPFN*SLASML Trigger: CAACATTGAAGCTAGGCTTCAATTAAAAGGTTCGAG...TACAGTTTGCAAAGAACGTTCACACATTCTCATTTGAGTTTTGCATAGTGAACC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330374.7 |
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| 3UTR-3UTR TCA 90 bp | GGTTCACTATGCAAAACTCAAATGAGAATGTGTGAACGTTCTTTGCAAACTGTAATTATTACTGTTCAGTaGGATTACACTGAACGTGGG | + |
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Preference number: 2 (lower is better) Translates to: GSLCKTQMRMCERSLQTVIITVQ*DYTERG Trigger: CCCACGTTCAGTGTAATCTCACTGAACAGTAATAAT...TACAGTTTGCAAAGAACGTTCACACATTCTCATTTGAGTTTTGCATAGTGAACC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330374.7 |
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| 3UTR-3UTR GCA 90 bp | GGTTCACTATGCAAAACTCAAATGAGAATGTGTGAACGTTCTTTGCAAACTGTAAACTGCCTTTGCATATaGCCCTGGTTTAAATACTTG | + |
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Preference number: 2 (lower is better) Translates to: GSLCKTQMRMCERSLQTVNCLCI*PWFKYL Trigger: CAAGTATTTAAACCAGGGGCATATGCAAAGGCAGTT...TACAGTTTGCAAAGAACGTTCACACATTCTCATTTGAGTTTTGCATAGTGAACC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330374.7 |
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| 3UTR-3UTR CCA 90 bp | GGTTCACTATGCAAAACTCAAATGAGAATGTGTGAACGTTCTTTGCAAACTGTAATAGTTATACTAATCTaGTGGGTGACACAGAGTGCT | + |
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Preference number: 2 (lower is better) Translates to: GSLCKTQMRMCERSLQTVIVILI*WVTQSA Trigger: AGCACTCTGTGTCACCCACCAGATTAGTATAACTAT...TACAGTTTGCAAAGAACGTTCACACATTCTCATTTGAGTTTTGCATAGTGAACC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330374.7 |
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| 3UTR-3UTR GCA 90 bp | GGTTCACTATGCAAAACTCAAATGAGAATGTGTGAACGTTCTTTGCAAACTGTAAATTACAACTGCCTTTaGATATGCCCCTGGTTTAAA | + |
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Preference number: 2 (lower is better) Translates to: GSLCKTQMRMCERSLQTVNYNCL*ICPWFK Trigger: TTTAAACCAGGGGCATATGCAAAGGCAGTTGTAATT...TACAGTTTGCAAAGAACGTTCACACATTCTCATTTGAGTTTTGCATAGTGAACC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330374.7 |
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| 3UTR-3UTR CCA 90 bp | GGTTCACTATGCAAAACTCAAATGAGAATGTGTGAACGTTCTTTGCAAACTGTACATTCCAGCGTAAAGTaGAGTTTAATTTGCTTCACT | + |
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Preference number: 2 (lower is better) Translates to: GSLCKTQMRMCERSLQTVHSSVK*SLICFT Trigger: AGTGAAGCAAATTAAACTCCACTTTACGCTGGAATG...TACAGTTTGCAAAGAACGTTCACACATTCTCATTTGAGTTTTGCATAGTGAACC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330374.7 |
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| 3UTR-3UTR CCA 90 bp | GGTTCACTATGCAAAACTCAAATGAGAATGTGTGAACGTTCTTTGCAAACTGTACCAAATCCAAGGACCTaGTATTTTCATGCTAAAGAA | + |
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Preference number: 2 (lower is better) Translates to: GSLCKTQMRMCERSLQTVPNPRT*YFHAKE Trigger: TTCTTTAGCATGAAAATACCAGGTCCTTGGATTTGG...TACAGTTTGCAAAGAACGTTCACACATTCTCATTTGAGTTTTGCATAGTGAACC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330374.7 |
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| 3UTR-3UTR CCA 90 bp | GGTTCACTATGCAAAACTCAAATGAGAATGTGTGAACGTTCTTTGCAAACTGTACTTTGCATATGCCCCTaGTTTAAATACTTGCAGAAA | + |
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Preference number: 2 (lower is better) Translates to: GSLCKTQMRMCERSLQTVLCICP*FKYLQK Trigger: TTTCTGCAAGTATTTAAACCAGGGGCATATGCAAAG...TACAGTTTGCAAAGAACGTTCACACATTCTCATTTGAGTTTTGCATAGTGAACC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330374.7 |
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| 3UTR-3UTR CCA 90 bp | GGTTCACTATGCAAAACTCAAATGAGAATGTGTGAACGTTCTTTGCAAACTGTAGATTTCCATGAAACATaGGGATTTTTAATGGCAGGT | + |
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Preference number: 2 (lower is better) Translates to: GSLCKTQMRMCERSLQTVDFHET*GFLMAG Trigger: ACCTGCCATTAAAAATCCCCATGTTTCATGGAAATC...TACAGTTTGCAAAGAACGTTCACACATTCTCATTTGAGTTTTGCATAGTGAACC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000330374.7 |
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| 3UTR-3UTR GCA 90 bp | GGTTCACTATGCAAAACTCAAATGAGAATGTGTGAACGTTCTTTGCAAACTGTAAAGTGGAGTTTAATTTaGTTCACTGTGTGCATCTTA | + |
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Preference number: 2 (lower is better) Translates to: GSLCKTQMRMCERSLQTVKWSLI*FTVCIL Trigger: TAAGATGCACACAGTGAAGCAAATTAAACTCCACTT...TACAGTTTGCAAAGAACGTTCACACATTCTCATTTGAGTTTTGCATAGTGAACC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330374.7 |
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| 3UTR-3UTR CCA 90 bp | GGTTCACTATGCAAAACTCAAATGAGAATGTGTGAACGTTCTTTGCAAACTGTAATCTCATTAAAAAGTTaGTCTGCAAAGCACAAAGCT | + |
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Preference number: 2 (lower is better) Translates to: GSLCKTQMRMCERSLQTVISLKS*SAKHKA Trigger: AGCTTTGTGCTTTGCAGACCAACTTTTTAATGAGAT...TACAGTTTGCAAAGAACGTTCACACATTCTCATTTGAGTTTTGCATAGTGAACC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000330374.7 |
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| 3UTR TCA 72 bp | GGTCTGCAAAGCACAAAGCTGGCCTGCAAGGGGACTTaGAGGAAGCAGGCTGAGTGTTTGAGTAGTGAGATC | + |
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Preference number: 3 (lower is better) Translates to: GLQSTKLACKGT*RKQAECLSSEI Trigger: GATCTCACTACTCAAACACTCAGCCTGCTTCCTTCAAGTCCCCTTGCAGGCCAGCTTTGTGCTTTGCAGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330374.7 |
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| 3UTR-3UTR CAA 90 bp | GGTTCACTATGCAAAACTCAAATGAGAATGTGTGAACGTTCTTTGCAAACTGTATGCAGCGAGCCGAGATaGCGCCCTTGCACTCCAGCC | + |
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Preference number: 3 (lower is better) Translates to: GSLCKTQMRMCERSLQTVCSEPR*RPCTPA Trigger: GGCTGGAGTGCAAGGGCGCAATCTCGGCTCGCTGCA...TACAGTTTGCAAAGAACGTTCACACATTCTCATTTGAGTTTTGCATAGTGAACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330374.7 |
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| 3UTR-3UTR CAA 90 bp | GGTTCACTATGCAAAACTCAAATGAGAATGTGTGAACGTTCTTTGCAAACTGTAGGTGACACAGAGTGCTaGACAGCAGAGAAACCTGCC | + |
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Preference number: 3 (lower is better) Translates to: GSLCKTQMRMCERSLQTVGDTEC*TAEKPA Trigger: GGCAGGTTTCTCTGCTGTCAAGCACTCTGTGTCACC...TACAGTTTGCAAAGAACGTTCACACATTCTCATTTGAGTTTTGCATAGTGAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330374.7 |
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| 3UTR GCA 72 bp | ATTAATAGTTATACTAATCTGGTGGGTGACACAGAGTaGTTGACAGCAGAGAAACCTGCCACTGACCTCAGA | + |
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Preference number: 3 (lower is better) Translates to: INSYTNLVGDTE*LTAEKPATDLR Trigger: TCTGAGGTCAGTGGCAGGTTTCTCTGCTGTCAAGCACTCTGTGTCACCCACCAGATTAGTATAACTATTAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330374.7 |
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| 3UTR TCA 72 bp | AACAGGTTCACTATGCAAAACTCAAATGAGAATGTGTaGACGTTCTTTGCAAACTGTAAGGTGCTGTGCAGA | + |
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Preference number: 3 (lower is better) Translates to: NRFTMQNSNENV*TFFANCKVLCR Trigger: TCTGCACAGCACCTTACAGTTTGCAAAGAACGTTCACACATTCTCATTTGAGTTTTGCATAGTGAACCTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330374.7 |
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| 3UTR GCA 72 bp | ATCGACGTCAAGAGACATCTCGTAACAGGTTCACTATaGAAAACTCAAATGAGAATGTGTGAACGTTCTTTG | + |
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Preference number: 3 (lower is better) Translates to: IDVKRHLVTGSL*KTQMRMCERSL Trigger: CAAAGAACGTTCACACATTCTCATTTGAGTTTTGCATAGTGAACCTGTTACGAGATGTCTCTTGACGTCGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330374.7 |
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| 3UTR-3UTR CAA 90 bp | GGTTCACTATGCAAAACTCAAATGAGAATGTGTGAACGTTCTTTGCAAACTGTAAAAGTGGAGTTTAATTaGCTTCACTGTGTGCATCTT | + |
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Preference number: 3 (lower is better) Translates to: GSLCKTQMRMCERSLQTVKVEFN*LHCVHL Trigger: AAGATGCACACAGTGAAGCAAATTAAACTCCACTTT...TACAGTTTGCAAAGAACGTTCACACATTCTCATTTGAGTTTTGCATAGTGAACC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330374.7 |
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| 3UTR-3UTR CAA 90 bp | GGTTCACTATGCAAAACTCAAATGAGAATGTGTGAACGTTCTTTGCAAACTGTATATCTCATTAAAAAGTaGGTCTGCAAAGCACAAAGC | + |
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Preference number: 3 (lower is better) Translates to: GSLCKTQMRMCERSLQTVYLIKK*VCKAQS Trigger: GCTTTGTGCTTTGCAGACCAACTTTTTAATGAGATA...TACAGTTTGCAAAGAACGTTCACACATTCTCATTTGAGTTTTGCATAGTGAACC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000330374.7 |
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| 3UTR TCA 72 bp | AACAATTTTAAATGGAGCTTCCTCGAACCTTTTAATTaGAGCCTAGCTTCAATGTTGAATGAGGAAGCAAAG | + |
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Preference number: 3 (lower is better) Translates to: NNFKWSFLEPFN*SLASMLNEEAK Trigger: CTTTGCTTCCTCATTCAACATTGAAGCTAGGCTTCAATTAAAAGGTTCGAGGAAGCTCCATTTAAAATTGTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330374.7 |
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| 3UTR TCA 72 bp | AAATACCCATGTATCATCACCTATTCAGCAAATGCCTaGAACCAAAACAATAATCCAACATTGGACAGTAAC | + |
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Preference number: 3 (lower is better) Translates to: KYPCIITYSANA*NQNNNPTLDSN Trigger: GTTACTGTCCAATGTTGGATTATTGTTTTGGTTTCAGGCATTTGCTGAATAGGTGATGATACATGGGTATTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330374.7 |
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| CDS-3UTR TCA 90 bp | GCATTCCAGCGTAAAGTGGAGTTTAATTTGCTTCACTGTGTGCATCTTAATATAGGCAGGAGAACTGCTTaGACCCGGGAGGCGGAGGTT | + |
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Preference number: 4 (lower is better) Translates to: AFQRKVEFNLLHCVHLNIGRRTA*TREAEV Trigger: AACCTCCGCCTCCCGGGTTCAAGCAGTTCTCCTGCC...TATATTAAGATGCACACAGTGAAGCAAATTAAACTCCACTTTACGCTGGAATGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330374.7 |
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| CDS-3UTR GCA 90 bp | GCATTCCAGCGTAAAGTGGAGTTTAATTTGCTTCACTGTGTGCATCTTAATATAGCAGCGAGCCGAGATTaGGCCCTTGCACTCCAGCCT | + |
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Preference number: 4 (lower is better) Translates to: AFQRKVEFNLLHCVHLNIAASRD*ALALQP Trigger: AGGCTGGAGTGCAAGGGCGCAATCTCGGCTCGCTGC...TATATTAAGATGCACACAGTGAAGCAAATTAAACTCCACTTTACGCTGGAATGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330374.7 |
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| CDS-3UTR CCA 90 bp | GGTTCACTATGCAAAACTCAAATGAGAATGTGTGAACGTTCTTTGCAAACTGTATATCCGGGCGCTCCATaGTGTAGCCGTGCCGGCACA | + |
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Preference number: 4 (lower is better) Translates to: GSLCKTQMRMCERSLQTVYPGAP*CSRAGT Trigger: TGTGCCGGCACGGCTACACCATGGAGCGCCCGGATA...TACAGTTTGCAAAGAACGTTCACACATTCTCATTTGAGTTTTGCATAGTGAACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330374.7 |
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| CDS-3UTR TCA 90 bp | GCATTCCAGCGTAAAGTGGAGTTTAATTTGCTTCACTGTGTGCATCTTAATATACACGCACCTGTCATCTaGGGTACTCAGGGGGCTGAG | + |
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Preference number: 4 (lower is better) Translates to: AFQRKVEFNLLHCVHLNIHAPVI*GTQGAE Trigger: CTCAGCCCCCTGAGTACCTCAGATGACAGGTGCGTG...TATATTAAGATGCACACAGTGAAGCAAATTAAACTCCACTTTACGCTGGAATGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000330374.7 |
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| CDS-3UTR GCA 90 bp | GGTTCACTATGCAAAACTCAAATGAGAATGTGTGAACGTTCTTTGCAAACTGTACCGAGATTGCGCCCTTaGACTCCAGCCTGGGCAAGA | + |
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Preference number: 4 (lower is better) Translates to: GSLCKTQMRMCERSLQTVPRLRP*TPAWAR Trigger: TCTTGCCCAGGCTGGAGTGCAAGGGCGCAATCTCGG...TACAGTTTGCAAAGAACGTTCACACATTCTCATTTGAGTTTTGCATAGTGAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330374.7 |
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| CDS-3UTR TCA 90 bp | GGTTCACTATGCAAAACTCAAATGAGAATGTGTGAACGTTCTTTGCAAACTGTAGCCTGCAAGGGGACTTaGAGGAAGCAGGCTGAGTGT | + |
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Preference number: 4 (lower is better) Translates to: GSLCKTQMRMCERSLQTVACKGT*RKQAEC Trigger: ACACTCAGCCTGCTTCCTTCAAGTCCCCTTGCAGGC...TACAGTTTGCAAAGAACGTTCACACATTCTCATTTGAGTTTTGCATAGTGAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330374.7 |
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| CDS-3UTR TCA 90 bp | GGTTCACTATGCAAAACTCAAATGAGAATGTGTGAACGTTCTTTGCAAACTGTAGGCGGGTGGATCACCTaGGGTCACAAGTTCAAGATT | + |
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Preference number: 4 (lower is better) Translates to: GSLCKTQMRMCERSLQTVGGWIT*GHKFKI Trigger: AATCTTGAACTTGTGACCTCAGGTGATCCACCCGCC...TACAGTTTGCAAAGAACGTTCACACATTCTCATTTGAGTTTTGCATAGTGAACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330374.7 |
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| CDS-3UTR TCA 90 bp | GGTTCACTATGCAAAACTCAAATGAGAATGTGTGAACGTTCTTTGCAAACTGTAAGCTACTTGGGAGGCTaGGGTGGAGAATCACTTGAA | + |
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Preference number: 4 (lower is better) Translates to: GSLCKTQMRMCERSLQTVSYLGG*GGESLE Trigger: TTCAAGTGATTCTCCACCTCAGCCTCCCAAGTAGCT...TACAGTTTGCAAAGAACGTTCACACATTCTCATTTGAGTTTTGCATAGTGAACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330374.7 |
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| CDS-3UTR GCA 90 bp | GGTTCACTATGCAAAACTCAAATGAGAATGTGTGAACGTTCTTTGCAAACTGTAGTGGGTGACACAGAGTaGTTGACAGCAGAGAAACCT | + |
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Preference number: 4 (lower is better) Translates to: GSLCKTQMRMCERSLQTVVGDTE*LTAEKP Trigger: AGGTTTCTCTGCTGTCAAGCACTCTGTGTCACCCAC...TACAGTTTGCAAAGAACGTTCACACATTCTCATTTGAGTTTTGCATAGTGAACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330374.7 |
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| 3UTR CAA 72 bp | AAGCAGGCTGAGTGTTTGAGTAGTGAGATCTTTGCTTaGCTCTTTAGATCCTTCAGTAAGCTAAGGTCCTTT | + |
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Preference number: 4 (lower is better) Translates to: KQAECLSSEIFA*LFRSFSKLRSF Trigger: AAAGGACCTTAGCTTACTGAAGGATCTAAAGAGCAAAGCAAAGATCTCACTACTCAAACACTCAGCCTGCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330374.7 |
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| CDS-3UTR TCA 90 bp | GCATTCCAGCGTAAAGTGGAGTTTAATTTGCTTCACTGTGTGCATCTTAATATACTGACCTCAGACAAGTaGCAAATTCTGTGTCAGAGT | + |
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Preference number: 4 (lower is better) Translates to: AFQRKVEFNLLHCVHLNILTSDK*QILCQS Trigger: ACTCTGACACAGAATTTGTCACTTGTCTGAGGTCAG...TATATTAAGATGCACACAGTGAAGCAAATTAAACTCCACTTTACGCTGGAATGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330374.7 |
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| CDS-3UTR GCA 90 bp | GGTTCACTATGCAAAACTCAAATGAGAATGTGTGAACGTTCTTTGCAAACTGTAATACACGGCTTGAAATaGAGCACATCCAAATCCTCC | + |
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Preference number: 4 (lower is better) Translates to: GSLCKTQMRMCERSLQTVIHGLK*STSKSS Trigger: GGAGGATTTGGATGTGCTGCATTTCAAGCCGTGTAT...TACAGTTTGCAAAGAACGTTCACACATTCTCATTTGAGTTTTGCATAGTGAACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330374.7 |
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| CDS-3UTR GCA 90 bp | GCATTCCAGCGTAAAGTGGAGTTTAATTTGCTTCACTGTGTGCATCTTAATATATTGCAAACTGTAAGGTaGTGTGCAGATGTTGTTAGC | + |
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Preference number: 4 (lower is better) Translates to: AFQRKVEFNLLHCVHLNILQTVR*CADVVS Trigger: GCTAACAACATCTGCACAGCACCTTACAGTTTGCAA...TATATTAAGATGCACACAGTGAAGCAAATTAAACTCCACTTTACGCTGGAATGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330374.7 |
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| CDS-3UTR CCA 90 bp | GCATTCCAGCGTAAAGTGGAGTTTAATTTGCTTCACTGTGTGCATCTTAATATATGCTTATTTAGAAAATaGTCAATAAGGCCGGGCGTG | + |
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Preference number: 4 (lower is better) Translates to: AFQRKVEFNLLHCVHLNICLFRK*SIRPGV Trigger: CACGCCCGGCCTTATTGACCATTTTCTAAATAAGCA...TATATTAAGATGCACACAGTGAAGCAAATTAAACTCCACTTTACGCTGGAATGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330374.7 |
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| CDS-3UTR TCA 90 bp | GGTTCACTATGCAAAACTCAAATGAGAATGTGTGAACGTTCTTTGCAAACTGTAGGATTACACTTCATGTaGAATTCCTCAGTGACATTC | + |
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Preference number: 4 (lower is better) Translates to: GSLCKTQMRMCERSLQTVGLHFM*NSSVTF Trigger: GAATGTCACTGAGGAATTTCACATGAAGTGTAATCC...TACAGTTTGCAAAGAACGTTCACACATTCTCATTTGAGTTTTGCATAGTGAACC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330374.7 |
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| CDS-3UTR TCA 90 bp | GCATTCCAGCGTAAAGTGGAGTTTAATTTGCTTCACTGTGTGCATCTTAATATACTCGAACCTTTTAATTaGAGCCTAGCTTCAATGTTG | + |
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Preference number: 4 (lower is better) Translates to: AFQRKVEFNLLHCVHLNILEPFN*SLASML Trigger: CAACATTGAAGCTAGGCTTCAATTAAAAGGTTCGAG...TATATTAAGATGCACACAGTGAAGCAAATTAAACTCCACTTTACGCTGGAATGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330374.7 |
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| CDS-3UTR GCA 90 bp | GCATTCCAGCGTAAAGTGGAGTTTAATTTGCTTCACTGTGTGCATCTTAATATAAACTGCCTTTGCATATaGCCCTGGTTTAAATACTTG | + |
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Preference number: 4 (lower is better) Translates to: AFQRKVEFNLLHCVHLNINCLCI*PWFKYL Trigger: CAAGTATTTAAACCAGGGGCATATGCAAAGGCAGTT...TATATTAAGATGCACACAGTGAAGCAAATTAAACTCCACTTTACGCTGGAATGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330374.7 |
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| CDS-3UTR CCA 90 bp | GCATTCCAGCGTAAAGTGGAGTTTAATTTGCTTCACTGTGTGCATCTTAATATAATAGTTATACTAATCTaGTGGGTGACACAGAGTGCT | + |
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Preference number: 4 (lower is better) Translates to: AFQRKVEFNLLHCVHLNIIVILI*WVTQSA Trigger: AGCACTCTGTGTCACCCACCAGATTAGTATAACTAT...TATATTAAGATGCACACAGTGAAGCAAATTAAACTCCACTTTACGCTGGAATGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330374.7 |
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| CDS-3UTR TCA 90 bp | GGTTCACTATGCAAAACTCAAATGAGAATGTGTGAACGTTCTTTGCAAACTGTAAGCTTCAATGTTGAATaGGGAAGCAAAGTATCTCAT | + |
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Preference number: 4 (lower is better) Translates to: GSLCKTQMRMCERSLQTVSFNVE*GSKVSH Trigger: ATGAGATACTTTGCTTCCTCATTCAACATTGAAGCT...TACAGTTTGCAAAGAACGTTCACACATTCTCATTTGAGTTTTGCATAGTGAACC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330374.7 |
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| CDS-3UTR TCA 90 bp | GGTTCACTATGCAAAACTCAAATGAGAATGTGTGAACGTTCTTTGCAAACTGTAATCAGTAGTTTGGACTaGCACTTCAAGTTATATCTC | + |
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Preference number: 4 (lower is better) Translates to: GSLCKTQMRMCERSLQTVISSLD*HFKLYL Trigger: GAGATATAACTTGAAGTGTCAGTCCAAACTACTGAT...TACAGTTTGCAAAGAACGTTCACACATTCTCATTTGAGTTTTGCATAGTGAACC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330374.7 |
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| CDS-3UTR TCA 90 bp | GCATTCCAGCGTAAAGTGGAGTTTAATTTGCTTCACTGTGTGCATCTTAATATATCAAATGAGAATGTGTaGACGTTCTTTGCAAACTGT | + |
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Preference number: 4 (lower is better) Translates to: AFQRKVEFNLLHCVHLNISNENV*TFFANC Trigger: ACAGTTTGCAAAGAACGTTCACACATTCTCATTTGA...TATATTAAGATGCACACAGTGAAGCAAATTAAACTCCACTTTACGCTGGAATGC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330374.7 |
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| CDS-3UTR CCA 90 bp | GCATTCCAGCGTAAAGTGGAGTTTAATTTGCTTCACTGTGTGCATCTTAATATACCAAATCCAAGGACCTaGTATTTTCATGCTAAAGAA | + |
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Preference number: 4 (lower is better) Translates to: AFQRKVEFNLLHCVHLNIPNPRT*YFHAKE Trigger: TTCTTTAGCATGAAAATACCAGGTCCTTGGATTTGG...TATATTAAGATGCACACAGTGAAGCAAATTAAACTCCACTTTACGCTGGAATGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330374.7 |
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| CDS-3UTR CCA 90 bp | GCATTCCAGCGTAAAGTGGAGTTTAATTTGCTTCACTGTGTGCATCTTAATATACTTTGCATATGCCCCTaGTTTAAATACTTGCAGAAA | + |
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Preference number: 4 (lower is better) Translates to: AFQRKVEFNLLHCVHLNILCICP*FKYLQK Trigger: TTTCTGCAAGTATTTAAACCAGGGGCATATGCAAAG...TATATTAAGATGCACACAGTGAAGCAAATTAAACTCCACTTTACGCTGGAATGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330374.7 |
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| CDS-3UTR GCA 90 bp | GCATTCCAGCGTAAAGTGGAGTTTAATTTGCTTCACTGTGTGCATCTTAATATAGTAACAGGTTCACTATaGAAAACTCAAATGAGAATG | + |
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Preference number: 4 (lower is better) Translates to: AFQRKVEFNLLHCVHLNIVTGSL*KTQMRM Trigger: CATTCTCATTTGAGTTTTGCATAGTGAACCTGTTAC...TATATTAAGATGCACACAGTGAAGCAAATTAAACTCCACTTTACGCTGGAATGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330374.7 |
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| CDS-3UTR CCA 90 bp | GCATTCCAGCGTAAAGTGGAGTTTAATTTGCTTCACTGTGTGCATCTTAATATAATCTCATTAAAAAGTTaGTCTGCAAAGCACAAAGCT | + |
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Preference number: 4 (lower is better) Translates to: AFQRKVEFNLLHCVHLNIISLKS*SAKHKA Trigger: AGCTTTGTGCTTTGCAGACCAACTTTTTAATGAGAT...TATATTAAGATGCACACAGTGAAGCAAATTAAACTCCACTTTACGCTGGAATGC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000330374.7 |
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| CDS CCA 90 bp | GCTCCATGGTGTAGCCGTGCCGGCACAGGCGCTCGGCGGCGGAGCTaGGCTCGGCGGCCGCGCTCAGTAAGCTCCGCGAGGGAACGGCCG | + |
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Preference number: 5 (lower is better) Translates to: APWCSRAGTGARRRS*ARRPRSVSSARERP Trigger: CGGCCGTTCCCTCGCGGAGCTTACTGAGCGCGGCCGCCGAGCCCAGCTCCGCCGCCGAGCGCCTGTGCCGGCACGGCTACACCATGGAGC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330374.7 |
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| CDS TCA 90 bp | GGTCCTCCTGGGCGGGCGGCGGCTACGCCGCCCCCTGAACTCGCGTaGACACTGGTCCTCGTCTGCGTCTCGGTCGCTGAGCTGGGGGCC | + |
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Preference number: 5 (lower is better) Translates to: GPPGRAAATPPPELA*TLVLVCVSVAELGA Trigger: GGCCCCCAGCTCAGCGACCGAGACGCAGACGAGGACCAGTGTTCACGCGAGTTCAGGGGGCGGCGTAGCCGCCGCCCGCCCAGGAGGACC 73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000370361.5 |
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| CDS CCA 90 bp | CGGCGTGCGCCCTGCCAGGAGGGGCCTGTGCTCGAGGAGCAGGCCTaGCGAGTAGCCCAGCCACTCCACGTTGAGCCGGGACTTGCCGCG | + |
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Preference number: 5 (lower is better) Translates to: RRAPCQEGPVLEEQA*RVAQPLHVEPGLAA Trigger: CGCGGCAAGTCCCGGCTCAACGTGGAGTGGCTGGGCTACTCGCCAGGCCTGCTCCTCGAGCACAGGCCCCTCCTGGCAGGGCGCACGCCG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370361.5 |
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| CDS CCA 90 bp | CTGGGCGGGCGGCGGCTACGCCGCCCCCTGAACTCGCGTGAACACTaGTCCTCGTCTGCGTCTCGGTCGCTGAGCTGGGGGCCGCAAGGA | + |
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Preference number: 5 (lower is better) Translates to: LGGRRLRRPLNSREH*SSSASRSLSWGPQG Trigger: TCCTTGCGGCCCCCAGCTCAGCGACCGAGACGCAGACGAGGACCAGTGTTCACGCGAGTTCAGGGGGCGGCGTAGCCGCCGCCCGCCCAG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000370361.5 |
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| CDS TCA 90 bp | TGTGCTCGAGGAGCAGGCCTGGCGAGTAGCCCAGCCACTCCACGTTaGGCCGGGACTTGCCGCGCAACATGGTCCTCCTGGGCGGGCGGC | + |
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Preference number: 5 (lower is better) Translates to: CARGAGLASSPATPR*AGTCRATWSSWAGG Trigger: GCCGCCCGCCCAGGAGGACCATGTTGCGCGGCAAGTCCCGGCTCAACGTGGAGTGGCTGGGCTACTCGCCAGGCCTGCTCCTCGAGCACA 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370361.5 |
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| CDS TCA 90 bp | GCGTCTCGGTCGCTGAGCTGGGGGCCGCAAGGAGACCCGAGCATATaGGCCGCGAAGAGGGACTACCAGCCAGAGGGCTGTGGTGCCGAG | + |
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Preference number: 5 (lower is better) Translates to: ASRSLSWGPQGDPSI*AAKRDYQPEGCGAE Trigger: CTCGGCACCACAGCCCTCTGGCTGGTAGTCCCTCTTCGCGGCTCATATGCTCGGGTCTCCTTGCGGCCCCCAGCTCAGCGACCGAGACGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370361.5 |
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| CDS-3UTR CAA 90 bp | GCATTCCAGCGTAAAGTGGAGTTTAATTTGCTTCACTGTGTGCATCTTAATATAAGTGAGATCTTTGCTTaGCTCTTTAGATCCTTCAGT | + |
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Preference number: 5 (lower is better) Translates to: AFQRKVEFNLLHCVHLNISEIFA*LFRSFS Trigger: ACTGAAGGATCTAAAGAGCAAAGCAAAGATCTCACT...TATATTAAGATGCACACAGTGAAGCAAATTAAACTCCACTTTACGCTGGAATGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330374.7 |
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| CDS-3UTR CAA 90 bp | GCATTCCAGCGTAAAGTGGAGTTTAATTTGCTTCACTGTGTGCATCTTAATATAAGCCTAGCTTCAATGTaGAATGAGGAAGCAAAGTAT | + |
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Preference number: 5 (lower is better) Translates to: AFQRKVEFNLLHCVHLNISLASM*NEEAKY Trigger: ATACTTTGCTTCCTCATTCAACATTGAAGCTAGGCT...TATATTAAGATGCACACAGTGAAGCAAATTAAACTCCACTTTACGCTGGAATGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330374.7 |
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| CDS-3UTR CAA 90 bp | GCATTCCAGCGTAAAGTGGAGTTTAATTTGCTTCACTGTGTGCATCTTAATATATTAACCTTCAAACATTaGGCGCTTTTTCCAAGAGGA | + |
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Preference number: 5 (lower is better) Translates to: AFQRKVEFNLLHCVHLNILTFKH*ALFPRG Trigger: TCCTCTTGGAAAAAGCGCCAAATGTTTGAAGGTTAA...TATATTAAGATGCACACAGTGAAGCAAATTAAACTCCACTTTACGCTGGAATGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000330374.7 |
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| CDS-3UTR CAA 90 bp | GCATTCCAGCGTAAAGTGGAGTTTAATTTGCTTCACTGTGTGCATCTTAATATAGGTGCTGTGCAGATGTaGTTAGCTATTGCTATTATT | + |
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Preference number: 5 (lower is better) Translates to: AFQRKVEFNLLHCVHLNIGAVQM*LAIAII Trigger: AATAATAGCAATAGCTAACAACATCTGCACAGCACC...TATATTAAGATGCACACAGTGAAGCAAATTAAACTCCACTTTACGCTGGAATGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330374.7 |
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| CDS-3UTR CAA 90 bp | GCATTCCAGCGTAAAGTGGAGTTTAATTTGCTTCACTGTGTGCATCTTAATATAATGATTATACACGGCTaGAAATGCAGCACATCCAAA | + |
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Preference number: 5 (lower is better) Translates to: AFQRKVEFNLLHCVHLNIMIIHG*KCSTSK Trigger: TTTGGATGTGCTGCATTTCAAGCCGTGTATAATCAT...TATATTAAGATGCACACAGTGAAGCAAATTAAACTCCACTTTACGCTGGAATGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330374.7 |
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| CDS-3UTR CAA 90 bp | GCATTCCAGCGTAAAGTGGAGTTTAATTTGCTTCACTGTGTGCATCTTAATATATATCTCATTAAAAAGTaGGTCTGCAAAGCACAAAGC | + |
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Preference number: 5 (lower is better) Translates to: AFQRKVEFNLLHCVHLNIYLIKK*VCKAQS Trigger: GCTTTGTGCTTTGCAGACCAACTTTTTAATGAGATA...TATATTAAGATGCACACAGTGAAGCAAATTAAACTCCACTTTACGCTGGAATGC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000330374.7 |
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| CDS-3UTR CAA 90 bp | GCATTCCAGCGTAAAGTGGAGTTTAATTTGCTTCACTGTGTGCATCTTAATATACCCTGGTTTAAATACTaGCAGAAAAATACCCATGTA | + |
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Preference number: 5 (lower is better) Translates to: AFQRKVEFNLLHCVHLNIPWFKY*QKNTHV Trigger: TACATGGGTATTTTTCTGCAAGTATTTAAACCAGGG...TATATTAAGATGCACACAGTGAAGCAAATTAAACTCCACTTTACGCTGGAATGC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000330374.7 |
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| CDS-3UTR CAA 90 bp | GGTTCACTATGCAAAACTCAAATGAGAATGTGTGAACGTTCTTTGCAAACTGTAAAACAAGTCAATTGGTaGTTTCTTTTGGCAAAGCTG | + |
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Preference number: 5 (lower is better) Translates to: GSLCKTQMRMCERSLQTVKQVNW*FLLAKL Trigger: CAGCTTTGCCAAAAGAAACAACCAATTGACTTGTTT...TACAGTTTGCAAAGAACGTTCACACATTCTCATTTGAGTTTTGCATAGTGAACC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000330374.7 |
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| CDS TCA 72 bp | GGGCGGGCGGCGGCTACGCCGCCCCCTGAACTCGCGTaGACACTGGTCCTCGTCTGCGTCTCGGTCGCTGAG | + |
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Preference number: 6 (lower is better) Translates to: GRAAATPPPELA*TLVLVCVSVAE Trigger: CTCAGCGACCGAGACGCAGACGAGGACCAGTGTTCACGCGAGTTCAGGGGGCGGCGTAGCCGCCGCCCGCCC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370361.5 |
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| CDS TCA 72 bp | TGGTCCTCCTGGGCGGGCGGCGGCTACGCCGCCCCCTaGACTCGCGTGAACACTGGTCCTCGTCTGCGTCTC | + |
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Preference number: 6 (lower is better) Translates to: WSSWAGGGYAAP*TRVNTGPRLRL Trigger: GAGACGCAGACGAGGACCAGTGTTCACGCGAGTTCAGGGGGCGGCGTAGCCGCCGCCCGCCCAGGAGGACCA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370361.5 |
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| CDS CCA 72 bp | CGGCGGCTACGCCGCCCCCTGAACTCGCGTGAACACTaGTCCTCGTCTGCGTCTCGGTCGCTGAGCTGGGGG | + |
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Preference number: 6 (lower is better) Translates to: RRLRRPLNSREH*SSSASRSLSWG Trigger: CCCCCAGCTCAGCGACCGAGACGCAGACGAGGACCAGTGTTCACGCGAGTTCAGGGGGCGGCGTAGCCGCCG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370361.5 |
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| CDS CCA 72 bp | CCCTGCCAGGAGGGGCCTGTGCTCGAGGAGCAGGCCTaGCGAGTAGCCCAGCCACTCCACGTTGAGCCGGGA | + |
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Preference number: 6 (lower is better) Translates to: PCQEGPVLEEQA*RVAQPLHVEPG Trigger: TCCCGGCTCAACGTGGAGTGGCTGGGCTACTCGCCAGGCCTGCTCCTCGAGCACAGGCCCCTCCTGGCAGGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370361.5 |
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| CDS TCA 72 bp | GGAGCAGGCCTGGCGAGTAGCCCAGCCACTCCACGTTaGGCCGGGACTTGCCGCGCAACATGGTCCTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: GAGLASSPATPR*AGTCRATWSSW Trigger: CCAGGAGGACCATGTTGCGCGGCAAGTCCCGGCTCAACGTGGAGTGGCTGGGCTACTCGCCAGGCCTGCTCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370361.5 |
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| CDS TCA 72 bp | CGCGTGAACACTGGTCCTCGTCTGCGTCTCGGTCGCTaGGCTGGGGGCCGCAAGGAGACCCGAGCATATGAG | + |
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Preference number: 6 (lower is better) Translates to: RVNTGPRLRLGR*AGGRKETRAYE Trigger: CTCATATGCTCGGGTCTCCTTGCGGCCCCCAGCTCAGCGACCGAGACGCAGACGAGGACCAGTGTTCACGCG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370361.5 |
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