RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for VKORC1L1 (Homo sapiens)

Ensembl gene IDs: ENSG00000196715

Ensembl transcript IDs: ENST00000360768.5, ENST00000434382.2, ENST00000648179.1, ENST00000648187.1

Found 431 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CATGAGCCATTGCACCCAGTGGGGGCAGTCCCTTTCCACAGGTCTTaGGCTCCAGCACAGAACACACTTGTTCTATTCCGTGAAGTATGG +
Preference number: 1 (lower is better)
Translates to: HEPLHPVGAVPFHRS*APAQNTLVLFREVW
Trigger: CCATACTTCACGGAATAGAACAAGTGTGTTCTGTGCTGGAGCTCAAGACCTGTGGAAAGGGACTGCCCCCACTGGGTGCAATGGCTCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
3UTR CCA 90 bp GAACCAGAGGACTGCCTTGGTAGAGCTGGATGCGCTGCTACAAGATaGCCTCACTGTACAGCCCTCAAACGTGAGGACTTCTTTCTCCAT +
Preference number: 1 (lower is better)
Translates to: EPEDCLGRAGCAATR*PHCTALKREDFFLH
Trigger: ATGGAGAAAGAAGTCCTCACGTTTGAGGGCTGTACAGTGAGGCCATCTTGTAGCAGCGCATCCAGCTCTACCAAGGCAGTCCTCTGGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
3UTR TCA 90 bp CTGAGTCAGTTGGAAGCTACGGAATTGTTGCTGACTCTACACATTTaGGTTTACAGAGCAGAGCCCGTCCCCTCCCTTCAAAGAGAAGGC +
Preference number: 1 (lower is better)
Translates to: LSQLEATELLLTLHI*VYRAEPVPSLQREG
Trigger: GCCTTCTCTTTGAAGGGAGGGGACGGGCTCTGCTCTGTAAACTCAAATGTGTAGAGTCAGCAACAATTCCGTAGCTTCCAACTGACTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
3UTR TCA 90 bp CCACAGGTCTTGAGCTCCAGCACAGAACACACTTGTTCTATTCCGTaGAGTATGGCTCAGCTGTATTTCCAACGGATTCATCTTTCTTGC +
Preference number: 1 (lower is better)
Translates to: PQVLSSSTEHTCSIP*SMAQLYFQRIHLSC
Trigger: GCAAGAAAGATGAATCCGTTGGAAATACAGCTGAGCCATACTTCACGGAATAGAACAAGTGTGTTCTGTGCTGGAGCTCAAGACCTGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
3UTR TCA 90 bp TTGGAAGCAAAAACATTACTGCTGCTTCTCAACCAGAGGATTAAGTaGTCACACAGGACCCTTCTGCAGAGTGCAGGTTTTCTACCTGAC +
Preference number: 1 (lower is better)
Translates to: LEAKTLLLLLNQRIK*SHRTLLQSAGFLPD
Trigger: GTCAGGTAGAAAACCTGCACTCTGCAGAAGGGTCCTGTGTGATCACTTAATCCTCTGGTTGAGAAGCAGCAGTAATGTTTTTGCTTCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
3UTR CCA 90 bp GACTTGAAGGTCTGGCCACATGACTCATTCTGTAAGGTTAACAACTaGCCCAGTTTTATGACTGAACACAAACTGGACTTGAACGTTCCA +
Preference number: 1 (lower is better)
Translates to: DLKVWPHDSFCKVNN*PSFMTEHKLDLNVP
Trigger: TGGAACGTTCAAGTCCAGTTTGTGTTCAGTCATAAAACTGGGCCAGTTGTTAACCTTACAGAATGAGTCATGTGGCCAGACCTTCAAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360768.5
ENST00000434382.2
ENST00000648179.1
ENST00000648187.1
3UTR TCA 90 bp GCTGTGTATAGGCTATTTTCACTATCTCCTCAGTCAACGCTGAGCTaGCAGTTCTTCAGTGCTACACTCCAACTAAACTGTACAGTAAGT +
Preference number: 1 (lower is better)
Translates to: AVYRLFSLSPQSTLS*QFFSATLQLNCTVS
Trigger: ACTTACTGTACAGTTTAGTTGGAGTGTAGCACTGAAGAACTGTCAGCTCAGCGTTGACTGAGGAGATAGTGAAAATAGCCTATACACAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360768.5
ENST00000434382.2
ENST00000648179.1
ENST00000648187.1
3UTR TCA 90 bp AGCTCTCTTTTAAGAAACTGGTTGAAACTGGTGAAAAGTTCATTATaGTTTGGACTTGATACCTGCCTCGGGCCAGAAGACCTACGTTGC +
Preference number: 1 (lower is better)
Translates to: SSLLRNWLKLVKSSL*FGLDTCLGPEDLRC
Trigger: GCAACGTAGGTCTTCTGGCCCGAGGCAGGTATCAAGTCCAAATCATAATGAACTTTTCACCAGTTTCAACCAGTTTCTTAAAAGAGAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
3UTR GCA 90 bp ATTTTCACTATCTCCTCAGTCAACGCTGAGCTGACAGTTCTTCAGTaGTACACTCCAACTAAACTGTACAGTAAGTTCTGCAGAAATGGA +
Preference number: 1 (lower is better)
Translates to: IFTISSVNAELTVLQ*YTPTKLYSKFCRNG
Trigger: TCCATTTCTGCAGAACTTACTGTACAGTTTAGTTGGAGTGTAGCACTGAAGAACTGTCAGCTCAGCGTTGACTGAGGAGATAGTGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360768.5
ENST00000434382.2
ENST00000648179.1
ENST00000648187.1
3UTR GCA 90 bp TTGTTTGATGGAAGGGTAGTTCTCACAATTAGAAACCATAAGTGCTaGCTGAGGTGTCTGAAATGTTTCACCCATGACTGTGTGTTAGAG +
Preference number: 1 (lower is better)
Translates to: LFDGRVVLTIRNHKC*LRCLKCFTHDCVLE
Trigger: CTCTAACACACAGTCATGGGTGAAACATTTCAGACACCTCAGGCAGCACTTATGGTTTCTAATTGTGAGAACTACCCTTCCATCAAACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
3UTR GCA 90 bp TTTTTGTTTGATGGAAGGGTAGTTCTCACAATTAGAAACCATAAGTaGTGCCTGAGGTGTCTGAAATGTTTCACCCATGACTGTGTGTTA +
Preference number: 1 (lower is better)
Translates to: FLFDGRVVLTIRNHK*CLRCLKCFTHDCVL
Trigger: TAACACACAGTCATGGGTGAAACATTTCAGACACCTCAGGCAGCACTTATGGTTTCTAATTGTGAGAACTACCCTTCCATCAAACAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
3UTR GCA 90 bp CTGAGTCTAAAAAGACTTCGTTTCAGTTCTTTTGGAATGCAACCCTaGAGTTTAAGAATAATGGGAGCACAACTTCCACAGGTAACTTCT +
Preference number: 1 (lower is better)
Translates to: LSLKRLRFSSFGMQP*SLRIMGAQLPQVTS
Trigger: AGAAGTTACCTGTGGAAGTTGTGCTCCCATTATTCTTAAACTGCAGGGTTGCATTCCAAAAGAACTGAAACGAAGTCTTTTTAGACTCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
3UTR CCA 90 bp AGGTCATTAGGTCTTTTTCCCCAAATAGGTTACCAGAAATCACAGTaGGTCTCCTTGTTGGCATCTAATAATGATCTTCCAAGACAAGAT +
Preference number: 1 (lower is better)
Translates to: RSLGLFPQIGYQKSQ*VSLLASNNDLPRQD
Trigger: ATCTTGTCTTGGAAGATCATTATTAGATGCCAACAAGGAGACCCACTGTGATTTCTGGTAACCTATTTGGGGAAAAAGACCTAATGACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
3UTR CCA 90 bp TATAAGGCTCCTACTGAGTCTAAAAAGACTTCGTTTCAGTTCTTTTaGAATGCAACCCTGCAGTTTAAGAATAATGGGAGCACAACTTCC +
Preference number: 1 (lower is better)
Translates to: YKAPTESKKTSFQFF*NATLQFKNNGSTTS
Trigger: GGAAGTTGTGCTCCCATTATTCTTAAACTGCAGGGTTGCATTCCAAAAGAACTGAAACGAAGTCTTTTTAGACTCAGTAGGAGCCTTATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
3UTR TCA 90 bp GAAAAAGAATCAACCCTGTATACCTTAGAAATGAGGTTACAGTATTaGCTTCAAGAATATAAGGCTCCTACTGAGTCTAAAAAGACTTCG +
Preference number: 1 (lower is better)
Translates to: EKESTLYTLEMRLQY*LQEYKAPTESKKTS
Trigger: CGAAGTCTTTTTAGACTCAGTAGGAGCCTTATATTCTTGAAGTCAATACTGTAACCTCATTTCTAAGGTATACAGGGTTGATTCTTTTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
3UTR-3UTR TCA 90 bp ATTAGCAAGAACACTGGCTCCCACTCCGGAGCGATGGGGCTTGGACTGGTCTTTTGCTCACTTTACAATTaGGGGCAGGGGGCTAGGGCT +
Preference number: 2 (lower is better)
Translates to: ISKNTGSHSGAMGLGLVFCSLYN*GQGARA
Trigger: AGCCCTAGCCCCCTGCCCTCAATTGTAAAGTGAGCA...AAAGACCAGTCCAAGCCCCATCGCTCCGGAGTGGGAGCCAGTGTTCTTGCTAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000360768.5
ENST00000434382.2
ENST00000648179.1
ENST00000648187.1
3UTR-3UTR GCA 90 bp ATTAGCAAGAACACTGGCTCCCACTCCGGAGCGATGGGGCTTGGACTGGTCTTTTGCTGCAACCACGGCTaGCAGTACTTTTCACAAGAT +
Preference number: 2 (lower is better)
Translates to: ISKNTGSHSGAMGLGLVFCCNHG*QYFSQD
Trigger: ATCTTGTGAAAAGTACTGGCAGCCGTGGTTGCAGCA...AAAGACCAGTCCAAGCCCCATCGCTCCGGAGTGGGAGCCAGTGTTCTTGCTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360768.5
ENST00000434382.2
ENST00000648179.1
ENST00000648187.1
3UTR-3UTR GCA 90 bp CCCTCTTCTGGGCAGAATCGGAGGTATAGAAAGGAATCTGAATTCTCCAGGGCACTTGGTAGAGCTGGATaGGCTGCTACAAGATGGCCT +
Preference number: 2 (lower is better)
Translates to: PSSGQNRRYRKESEFSRALGRAG*AATRWP
Trigger: AGGCCATCTTGTAGCAGCGCATCCAGCTCTACCAAG...TGCCCTGGAGAATTCAGATTCCTTTCTATACCTCCGATTCTGCCCAGAAGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
3UTR-3UTR CCA 90 bp CCCTCTTCTGGGCAGAATCGGAGGTATAGAAAGGAATCTGAATTCTCCAGGGCACGGAGCGATGGGGCTTaGACTGGTCTTTTCCATCAT +
Preference number: 2 (lower is better)
Translates to: PSSGQNRRYRKESEFSRARSDGA*TGLFHH
Trigger: ATGATGGAAAAGACCAGTCCAAGCCCCATCGCTCCG...TGCCCTGGAGAATTCAGATTCCTTTCTATACCTCCGATTCTGCCCAGAAGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
3UTR CAA 90 bp GGGCAGTCCCTTTCCACAGGTCTTGAGCTCCAGCACAGAACACACTaGTTCTATTCCGTGAAGTATGGCTCAGCTGTATTTCCAACGGAT +
Preference number: 2 (lower is better)
Translates to: GQSLSTGLELQHRTH*FYSVKYGSAVFPTD
Trigger: ATCCGTTGGAAATACAGCTGAGCCATACTTCACGGAATAGAACAAGTGTGTTCTGTGCTGGAGCTCAAGACCTGTGGAAAGGGACTGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
3UTR-3UTR TCA 90 bp ATTTGCTGCAACCACGGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATGCTCACTTTACAATTaGGGGCAGGGGGCTAGGGCT +
Preference number: 2 (lower is better)
Translates to: ICCNHGCQYFSQDAVYRLCSLYN*GQGARA
Trigger: AGCCCTAGCCCCCTGCCCTCAATTGTAAAGTGAGCA...TAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGCAGCAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000360768.5
ENST00000434382.2
ENST00000648179.1
ENST00000648187.1
3UTR-3UTR TCA 90 bp CTGGGCAGCATGTCAGCCCTGAAGGTTACAAATCCAGTATTTGACTGCAAAACATGCTCACTTTACAATTaGGGGCAGGGGGCTAGGGCT +
Preference number: 2 (lower is better)
Translates to: LGSMSALKVTNPVFDCKTCSLYN*GQGARA
Trigger: AGCCCTAGCCCCCTGCCCTCAATTGTAAAGTGAGCA...TGTTTTGCAGTCAAATACTGGATTTGTAACCTTCAGGGCTGACATGCTGCCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
3UTR-3UTR TCA 90 bp GCCTTGGACTTGAAGGTCTGGCCACATGACTCATTCTGTAAGGTTAACAACTGGCTCCTCAGTCAACGCTaGGCTGACAGTTCTTCAGTG +
Preference number: 2 (lower is better)
Translates to: ALDLKVWPHDSFCKVNNWLLSQR*ADSSSV
Trigger: CACTGAAGAACTGTCAGCTCAGCGTTGACTGAGGAG...CCAGTTGTTAACCTTACAGAATGAGTCATGTGGCCAGACCTTCAAGTCCAAGGC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360768.5
ENST00000434382.2
ENST00000648179.1
ENST00000648187.1
3UTR-3UTR TCA 90 bp CCCTCTTCTGGGCAGAATCGGAGGTATAGAAAGGAATCTGAATTCTCCAGGGCATTGCTATTCTCCCGATaGAGCAAACTGGGCAGCATG +
Preference number: 2 (lower is better)
Translates to: PSSGQNRRYRKESEFSRALLFSR*SKLGSM
Trigger: CATGCTGCCCAGTTTGCTTCATCGGGAGAATAGCAA...TGCCCTGGAGAATTCAGATTCCTTTCTATACCTCCGATTCTGCCCAGAAGAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
3UTR-3UTR TCA 90 bp CCCTCTTCTGGGCAGAATCGGAGGTATAGAAAGGAATCTGAATTCTCCAGGGCAGCATGTGTGTCATTATaGGAGCAGTGGCGACATGAG +
Preference number: 2 (lower is better)
Translates to: PSSGQNRRYRKESEFSRAACVSL*EQWRHE
Trigger: CTCATGTCGCCACTGCTCTCATAATGACACACATGC...TGCCCTGGAGAATTCAGATTCCTTTCTATACCTCCGATTCTGCCCAGAAGAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
3UTR-3UTR TCA 90 bp CCCTCTTCTGGGCAGAATCGGAGGTATAGAAAGGAATCTGAATTCTCCAGGGCACTGGAAGGGTCTGGCTaGCCATTTTGCCATGTTTTC +
Preference number: 2 (lower is better)
Translates to: PSSGQNRRYRKESEFSRALEGSG*PFCHVF
Trigger: GAAAACATGGCAAAATGGTCAGCCAGACCCTTCCAG...TGCCCTGGAGAATTCAGATTCCTTTCTATACCTCCGATTCTGCCCAGAAGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
3UTR-3UTR GCA 90 bp ATTAGCAAGAACACTGGCTCCCACTCCGGAGCGATGGGGCTTGGACTGGTCTTTCTGACAGTTCTTCAGTaGTACACTCCAACTAAACTG +
Preference number: 2 (lower is better)
Translates to: ISKNTGSHSGAMGLGLVFLTVLQ*YTPTKL
Trigger: CAGTTTAGTTGGAGTGTAGCACTGAAGAACTGTCAG...AAAGACCAGTCCAAGCCCCATCGCTCCGGAGTGGGAGCCAGTGTTCTTGCTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360768.5
ENST00000434382.2
ENST00000648179.1
ENST00000648187.1
3UTR-3UTR GCA 90 bp CCCTCTTCTGGGCAGAATCGGAGGTATAGAAAGGAATCTGAATTCTCCAGGGCAAAAGAACCAGAGGACTaGCTTGGTAGAGCTGGATGC +
Preference number: 2 (lower is better)
Translates to: PSSGQNRRYRKESEFSRAKEPED*LGRAGC
Trigger: GCATCCAGCTCTACCAAGGCAGTCCTCTGGTTCTTT...TGCCCTGGAGAATTCAGATTCCTTTCTATACCTCCGATTCTGCCCAGAAGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
3UTR CAA 90 bp TCTGAGTCAGTTGGAAGCTACGGAATTGTTGCTGACTCTACACATTaGAGTTTACAGAGCAGAGCCCGTCCCCTCCCTTCAAAGAGAAGG +
Preference number: 2 (lower is better)
Translates to: SESVGSYGIVADSTH*SLQSRARPLPSKRR
Trigger: CCTTCTCTTTGAAGGGAGGGGACGGGCTCTGCTCTGTAAACTCAAATGTGTAGAGTCAGCAACAATTCCGTAGCTTCCAACTGACTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
3UTR-3UTR GCA 90 bp CCCTCTTCTGGGCAGAATCGGAGGTATAGAAAGGAATCTGAATTCTCCAGGGCATGCTGCAACCACGGCTaGCAGTACTTTTCACAAGAT +
Preference number: 2 (lower is better)
Translates to: PSSGQNRRYRKESEFSRACCNHG*QYFSQD
Trigger: ATCTTGTGAAAAGTACTGGCAGCCGTGGTTGCAGCA...TGCCCTGGAGAATTCAGATTCCTTTCTATACCTCCGATTCTGCCCAGAAGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
3UTR-3UTR CCA 90 bp CTGGGCAGCATGTCAGCCCTGAAGGTTACAAATCCAGTATTTGACTGCAAAACACGGAGCGATGGGGCTTaGACTGGTCTTTTCCATCAT +
Preference number: 2 (lower is better)
Translates to: LGSMSALKVTNPVFDCKTRSDGA*TGLFHH
Trigger: ATGATGGAAAAGACCAGTCCAAGCCCCATCGCTCCG...TGTTTTGCAGTCAAATACTGGATTTGTAACCTTCAGGGCTGACATGCTGCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
3UTR-3UTR GCA 90 bp CCCTCTTCTGGGCAGAATCGGAGGTATAGAAAGGAATCTGAATTCTCCAGGGCAGAAGGACACTTCTTCTaGCCAAGGTCAACACACAAA +
Preference number: 2 (lower is better)
Translates to: PSSGQNRRYRKESEFSRAEGHFF*PRSTHK
Trigger: TTTGTGTGTTGACCTTGGGCAGAAGAAGTGTCCTTC...TGCCCTGGAGAATTCAGATTCCTTTCTATACCTCCGATTCTGCCCAGAAGAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
3UTR-3UTR CCA 90 bp ATTAGCAAGAACACTGGCTCCCACTCCGGAGCGATGGGGCTTGGACTGGTCTTTTGTAAGGTTAACAACTaGCCCAGTTTTATGACTGAA +
Preference number: 2 (lower is better)
Translates to: ISKNTGSHSGAMGLGLVFCKVNN*PSFMTE
Trigger: TTCAGTCATAAAACTGGGCCAGTTGTTAACCTTACA...AAAGACCAGTCCAAGCCCCATCGCTCCGGAGTGGGAGCCAGTGTTCTTGCTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360768.5
ENST00000434382.2
ENST00000648179.1
ENST00000648187.1
3UTR-3UTR CCA 90 bp CCCTCTTCTGGGCAGAATCGGAGGTATAGAAAGGAATCTGAATTCTCCAGGGCATTGGACTTGAAGGTCTaGCCACATGACTCATTCTGT +
Preference number: 2 (lower is better)
Translates to: PSSGQNRRYRKESEFSRALDLKV*PHDSFC
Trigger: ACAGAATGAGTCATGTGGCCAGACCTTCAAGTCCAA...TGCCCTGGAGAATTCAGATTCCTTTCTATACCTCCGATTCTGCCCAGAAGAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
3UTR-3UTR CCA 90 bp CTGGGCACACAGCTAGTTAAACCTGAGTTATTTCACCGGAAATTTACCTTTAGTCCCACTCCGGAGCGATaGGGCTTGGACTGGTCTTTT +
Preference number: 2 (lower is better)
Translates to: LGTQLVKPELFHRKFTFSPTPER*GLDWSF
Trigger: AAAAGACCAGTCCAAGCCCCATCGCTCCGGAGTGGG...ACTAAAGGTAAATTTCCGGTGAAATAACTCAGGTTTAACTAGCTGTGTGCCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
3UTR-3UTR CCA 90 bp CCCTCTTCTGGGCAGAATCGGAGGTATAGAAAGGAATCTGAATTCTCCAGGGCAAAAACTGGAAGGGTCTaGCTGACCATTTTGCCATGT +
Preference number: 2 (lower is better)
Translates to: PSSGQNRRYRKESEFSRAKTGRV*LTILPC
Trigger: ACATGGCAAAATGGTCAGCCAGACCCTTCCAGTTTT...TGCCCTGGAGAATTCAGATTCCTTTCTATACCTCCGATTCTGCCCAGAAGAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
3UTR-3UTR TCA 90 bp CCCTCTTCTGGGCAGAATCGGAGGTATAGAAAGGAATCTGAATTCTCCAGGGCAGCCCAGTTTTATGACTaGACACAAACTGGACTTGAA +
Preference number: 2 (lower is better)
Translates to: PSSGQNRRYRKESEFSRAAQFYD*TQTGLE
Trigger: TTCAAGTCCAGTTTGTGTTCAGTCATAAAACTGGGC...TGCCCTGGAGAATTCAGATTCCTTTCTATACCTCCGATTCTGCCCAGAAGAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
3UTR-3UTR CCA 90 bp CTGGGCACACAGCTAGTTAAACCTGAGTTATTTCACCGGAAATTTACCTTTAGTTGCGCTGCTACAAGATaGCCTCACTGTACAGCCCTC +
Preference number: 2 (lower is better)
Translates to: LGTQLVKPELFHRKFTFSCAATR*PHCTAL
Trigger: GAGGGCTGTACAGTGAGGCCATCTTGTAGCAGCGCA...ACTAAAGGTAAATTTCCGGTGAAATAACTCAGGTTTAACTAGCTGTGTGCCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
3UTR-3UTR TCA 90 bp ATTTGCTGCAACCACGGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTAGTTAAAGCTTGTCTTTaGTTGGCTCGGCGTATCCTT +
Preference number: 2 (lower is better)
Translates to: ICCNHGCQYFSQDAVYRLVKACL*LARRIL
Trigger: AAGGATACGCCGAGCCAATCAAAGACAAGCTTTAAC...TAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGCAGCAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360768.5
ENST00000434382.2
ENST00000648179.1
ENST00000648187.1
3UTR-3UTR TCA 90 bp GCAACCACGGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTCACGTTAAAGCTTGTCTTTaGTTGGCTCGGCGTATCCTT +
Preference number: 2 (lower is better)
Translates to: ATTAASTFHKMLCIGYFHVKACL*LARRIL
Trigger: AAGGATACGCCGAGCCAATCAAAGACAAGCTTTAAC...GTGAAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360768.5
ENST00000434382.2
ENST00000648179.1
ENST00000648187.1
3UTR-3UTR CCA 90 bp GCCTTGGACTTGAAGGTCTGGCCACATGACTCATTCTGTAAGGTTAACAACTGGAAGCTTGTCTTTGATTaGCTCGGCGTATCCTTTTTG +
Preference number: 2 (lower is better)
Translates to: ALDLKVWPHDSFCKVNNWKLVFD*LGVSFL
Trigger: CAAAAAGGATACGCCGAGCCAATCAAAGACAAGCTT...CCAGTTGTTAACCTTACAGAATGAGTCATGTGGCCAGACCTTCAAGTCCAAGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360768.5
ENST00000434382.2
ENST00000648179.1
ENST00000648187.1
3UTR-3UTR CCA 90 bp CTGGGCAGCATGTCAGCCCTGAAGGTTACAAATCCAGTATTTGACTGCAAAACATTGGACTTGAAGGTCTaGCCACATGACTCATTCTGT +
Preference number: 2 (lower is better)
Translates to: LGSMSALKVTNPVFDCKTLDLKV*PHDSFC
Trigger: ACAGAATGAGTCATGTGGCCAGACCTTCAAGTCCAA...TGTTTTGCAGTCAAATACTGGATTTGTAACCTTCAGGGCTGACATGCTGCCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
3UTR-3UTR TCA 90 bp ATTTGCTGCAACCACGGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATGCTGCAAAATAAACTaGATGGAAAGGGGCTTGAGA +
Preference number: 2 (lower is better)
Translates to: ICCNHGCQYFSQDAVYRLCCKIN*MERGLR
Trigger: TCTCAAGCCCCTTTCCATTCAGTTTATTTTGCAGCA...TAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGCAGCAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
3UTR-3UTR CCA 90 bp CCCTCTTCTGGGCAGAATCGGAGGTATAGAAAGGAATCTGAATTCTCCAGGGCATGTAAGGTTAACAACTaGCCCAGTTTTATGACTGAA +
Preference number: 2 (lower is better)
Translates to: PSSGQNRRYRKESEFSRACKVNN*PSFMTE
Trigger: TTCAGTCATAAAACTGGGCCAGTTGTTAACCTTACA...TGCCCTGGAGAATTCAGATTCCTTTCTATACCTCCGATTCTGCCCAGAAGAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
3UTR-3UTR GCA 90 bp CCCTCTTCTGGGCAGAATCGGAGGTATAGAAAGGAATCTGAATTCTCCAGGGCAAGACATTTGCAAGAATaGAACATCAAGACAAGCTTT +
Preference number: 2 (lower is better)
Translates to: PSSGQNRRYRKESEFSRARHLQE*NIKTSF
Trigger: AAAGCTTGTCTTGATGTTGCATTCTTGCAAATGTCT...TGCCCTGGAGAATTCAGATTCCTTTCTATACCTCCGATTCTGCCCAGAAGAGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
3UTR-3UTR GCA 90 bp CCCTCTTCTGGGCAGAATCGGAGGTATAGAAAGGAATCTGAATTCTCCAGGGCAAGAGTTGAAGACATTTaGAAGAATGCAACATCAAGA +
Preference number: 2 (lower is better)
Translates to: PSSGQNRRYRKESEFSRARVEDI*KNATSR
Trigger: TCTTGATGTTGCATTCTTGCAAATGTCTTCAACTCT...TGCCCTGGAGAATTCAGATTCCTTTCTATACCTCCGATTCTGCCCAGAAGAGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
3UTR CAA 90 bp CTTTTTCCCCAAATAGGTTACCAGAAATCACAGTGGGTCTCCTTGTaGGCATCTAATAATGATCTTCCAAGACAAGATCTCCTGTCACTC +
Preference number: 2 (lower is better)
Translates to: LFPQIGYQKSQWVSL*ASNNDLPRQDLLSL
Trigger: GAGTGACAGGAGATCTTGTCTTGGAAGATCATTATTAGATGCCAACAAGGAGACCCACTGTGATTTCTGGTAACCTATTTGGGGAAAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
3UTR CAA 90 bp GGTCTTTTTCCCCAAATAGGTTACCAGAAATCACAGTGGGTCTCCTaGTTGGCATCTAATAATGATCTTCCAAGACAAGATCTCCTGTCA +
Preference number: 2 (lower is better)
Translates to: GLFPQIGYQKSQWVS*LASNNDLPRQDLLS
Trigger: TGACAGGAGATCTTGTCTTGGAAGATCATTATTAGATGCCAACAAGGAGACCCACTGTGATTTCTGGTAACCTATTTGGGGAAAAAGACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
3UTR-3UTR TCA 90 bp ACTTTTCACAAGATGCTGTGTATAGGCTATTTTCACTATCTCCTCAGTCAACGCTGCTGCAAAATAAACTaGATGGAAAGGGGCTTGAGA +
Preference number: 2 (lower is better)
Translates to: TFHKMLCIGYFHYLLSQRCCKIN*MERGLR
Trigger: TCTCAAGCCCCTTTCCATTCAGTTTATTTTGCAGCA...GCGTTGACTGAGGAGATAGTGAAAATAGCCTATACACAGCATCTTGTGAAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
3UTR-3UTR CCA 90 bp CTGGGCACACAGCTAGTTAAACCTGAGTTATTTCACCGGAAATTTACCTTTAGTAAGCTTGTCTTTGATTaGCTCGGCGTATCCTTTTTG +
Preference number: 2 (lower is better)
Translates to: LGTQLVKPELFHRKFTFSKLVFD*LGVSFL
Trigger: CAAAAAGGATACGCCGAGCCAATCAAAGACAAGCTT...ACTAAAGGTAAATTTCCGGTGAAATAACTCAGGTTTAACTAGCTGTGTGCCCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
3UTR-3UTR TCA 90 bp CTGGGCACACAGCTAGTTAAACCTGAGTTATTTCACCGGAAATTTACCTTTAGTGTGAAAAGTTCATTATaGTTTGGACTTGATACCTGC +
Preference number: 2 (lower is better)
Translates to: LGTQLVKPELFHRKFTFSVKSSL*FGLDTC
Trigger: GCAGGTATCAAGTCCAAATCATAATGAACTTTTCAC...ACTAAAGGTAAATTTCCGGTGAAATAACTCAGGTTTAACTAGCTGTGTGCCCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
3UTR-3UTR TCA 90 bp ACTCCAACTAAACTGTACAGTAAGTTCTGCAGAAATGGATCTAATATTTCTACCTGCTGCAAAATAAACTaGATGGAAAGGGGCTTGAGA +
Preference number: 2 (lower is better)
Translates to: TPTKLYSKFCRNGSNISTCCKIN*MERGLR
Trigger: TCTCAAGCCCCTTTCCATTCAGTTTATTTTGCAGCA...GGTAGAAATATTAGATCCATTTCTGCAGAACTTACTGTACAGTTTAGTTGGAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
3UTR-3UTR CCA 90 bp ACTCCAACTAAACTGTACAGTAAGTTCTGCAGAAATGGATCTAATATTTCTACCAAGCTTGTCTTTGATTaGCTCGGCGTATCCTTTTTG +
Preference number: 2 (lower is better)
Translates to: TPTKLYSKFCRNGSNISTKLVFD*LGVSFL
Trigger: CAAAAAGGATACGCCGAGCCAATCAAAGACAAGCTT...GGTAGAAATATTAGATCCATTTCTGCAGAACTTACTGTACAGTTTAGTTGGAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360768.5
ENST00000434382.2
ENST00000648179.1
ENST00000648187.1
3UTR CAA 90 bp CTGATATCAGATGTTAACCATACAAACATCCTGTCACAATTTCATTaGGGTGTACTCAAATCCCCTTACAAAAGTCTTCTTACTGCATGT +
Preference number: 2 (lower is better)
Translates to: LISDVNHTNILSQFH*GVLKSPYKSLLTAC
Trigger: ACATGCAGTAAGAAGACTTTTGTAAGGGGATTTGAGTACACCCAAATGAAATTGTGACAGGATGTTTGTATGGTTAACATCTGATATCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
3UTR CCA 72 bp GACTGCCTTGGTAGAGCTGGATGCGCTGCTACAAGATaGCCTCACTGTACAGCCCTCAAACGTGAGGACTTC +
Preference number: 3 (lower is better)
Translates to: DCLGRAGCAATR*PHCTALKREDF
Trigger: GAAGTCCTCACGTTTGAGGGCTGTACAGTGAGGCCATCTTGTAGCAGCGCATCCAGCTCTACCAAGGCAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
3UTR TCA 72 bp GCCTTGAGATGTGTCTACCTGTTGCTATTCTCCCGATaGAGCAAACTGGGCAGCATGTCAGCCCTGAAGGTT +
Preference number: 3 (lower is better)
Translates to: ALRCVYLLLFSR*SKLGSMSALKV
Trigger: AACCTTCAGGGCTGACATGCTGCCCAGTTTGCTTCATCGGGAGAATAGCAACAGGTAGACACATCTCAAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
3UTR CCA 72 bp CAAGAACACTGGCTCCCACTCCGGAGCGATGGGGCTTaGACTGGTCTTTTCCATCATAATACTCTTTGCTTG +
Preference number: 3 (lower is better)
Translates to: QEHWLPLRSDGA*TGLFHHNTLCL
Trigger: CAAGCAAAGAGTATTATGATGGAAAAGACCAGTCCAAGCCCCATCGCTCCGGAGTGGGAGCCAGTGTTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360768.5
ENST00000434382.2
ENST00000648179.1
ENST00000648187.1
3UTR-3UTR CAA 90 bp GCAAGAACACTGGCTCCCACTCCGGAGCGATGGGGCTTGGACTGGTCTTTTCCAGAACACAAACTGGACTaGAACGTTCCAATTCAATTT +
Preference number: 3 (lower is better)
Translates to: ARTLAPTPERWGLDWSFPEHKLD*NVPIQF
Trigger: AAATTGAATTGGAACGTTCAAGTCCAGTTTGTGTTC...TGGAAAAGACCAGTCCAAGCCCCATCGCTCCGGAGTGGGAGCCAGTGTTCTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360768.5
ENST00000434382.2
ENST00000648179.1
ENST00000648187.1
3UTR-3UTR CAA 90 bp CCCTCTTCTGGGCAGAATCGGAGGTATAGAAAGGAATCTGAATTCTCCAGGGCATGGGACACGAGGAACTaGTTTAGCACAACCGATGTC +
Preference number: 3 (lower is better)
Translates to: PSSGQNRRYRKESEFSRAWDTRN*FSTTDV
Trigger: GACATCGGTTGTGCTAAACAAGTTCCTCGTGTCCCA...TGCCCTGGAGAATTCAGATTCCTTTCTATACCTCCGATTCTGCCCAGAAGAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
3UTR GCA 72 bp GGACTTGATACCTGCCTCGGGCCAGAAGACCTACGTTaGATCAATTCTGAGTCAGTTGGAAGCTACGGAATT +
Preference number: 3 (lower is better)
Translates to: GLDTCLGPEDLR*INSESVGSYGI
Trigger: AATTCCGTAGCTTCCAACTGACTCAGAATTGATGCAACGTAGGTCTTCTGGCCCGAGGCAGGTATCAAGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
3UTR-3UTR CAA 90 bp CCCTCTTCTGGGCAGAATCGGAGGTATAGAAAGGAATCTGAATTCTCCAGGGCATTTTTGCCCTATTATTaGCTGCAACCACGGCTGCCA +
Preference number: 3 (lower is better)
Translates to: PSSGQNRRYRKESEFSRAFLPYY*LQPRLP
Trigger: TGGCAGCCGTGGTTGCAGCAAATAATAGGGCAAAAA...TGCCCTGGAGAATTCAGATTCCTTTCTATACCTCCGATTCTGCCCAGAAGAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
3UTR-3UTR CAA 90 bp CCCTCTTCTGGGCAGAATCGGAGGTATAGAAAGGAATCTGAATTCTCCAGGGCAGCTGACTCTACACATTaGAGTTTACAGAGCAGAGCC +
Preference number: 3 (lower is better)
Translates to: PSSGQNRRYRKESEFSRAADSTH*SLQSRA
Trigger: GGCTCTGCTCTGTAAACTCAAATGTGTAGAGTCAGC...TGCCCTGGAGAATTCAGATTCCTTTCTATACCTCCGATTCTGCCCAGAAGAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
3UTR TCA 72 bp TTGGAAGCTACGGAATTGTTGCTGACTCTACACATTTaGGTTTACAGAGCAGAGCCCGTCCCCTCCCTTCAA +
Preference number: 3 (lower is better)
Translates to: LEATELLLTLHI*VYRAEPVPSLQ
Trigger: TTGAAGGGAGGGGACGGGCTCTGCTCTGTAAACTCAAATGTGTAGAGTCAGCAACAATTCCGTAGCTTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
3UTR-3UTR CAA 90 bp CTGGGCACACAGCTAGTTAAACCTGAGTTATTTCACCGGAAATTTACCTTTAGTAACCAGAGGACTGCCTaGGTAGAGCTGGATGCGCTG +
Preference number: 3 (lower is better)
Translates to: LGTQLVKPELFHRKFTFSNQRTA*VELDAL
Trigger: CAGCGCATCCAGCTCTACCAAGGCAGTCCTCTGGTT...ACTAAAGGTAAATTTCCGGTGAAATAACTCAGGTTTAACTAGCTGTGTGCCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
3UTR-3UTR CAA 90 bp CCCTCTTCTGGGCAGAATCGGAGGTATAGAAAGGAATCTGAATTCTCCAGGGCAAAAGTTCATTATGATTaGGACTTGATACCTGCCTCG +
Preference number: 3 (lower is better)
Translates to: PSSGQNRRYRKESEFSRAKVHYD*DLIPAS
Trigger: CGAGGCAGGTATCAAGTCCAAATCATAATGAACTTT...TGCCCTGGAGAATTCAGATTCCTTTCTATACCTCCGATTCTGCCCAGAAGAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
3UTR-3UTR CAA 90 bp CCCTCTTCTGGGCAGAATCGGAGGTATAGAAAGGAATCTGAATTCTCCAGGGCAAAAAACCATTGGATATaGGGACACGAGGAACTTGTT +
Preference number: 3 (lower is better)
Translates to: PSSGQNRRYRKESEFSRAKNHWI*GHEELV
Trigger: AACAAGTTCCTCGTGTCCCAATATCCAATGGTTTTT...TGCCCTGGAGAATTCAGATTCCTTTCTATACCTCCGATTCTGCCCAGAAGAGGG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
3UTR TCA 72 bp TCTCCCGATGAAGCAAACTGGGCAGCATGTCAGCCCTaGAGGTTACAAATCCAGTATTTGACTGCAAAACAA +
Preference number: 3 (lower is better)
Translates to: SPDEANWAACQP*RLQIQYLTAKQ
Trigger: TTGTTTTGCAGTCAAATACTGGATTTGTAACCTTCAGGGCTGACATGCTGCCCAGTTTGCTTCATCGGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
3UTR GCA 72 bp ATCTCCTCAGTCAACGCTGAGCTGACAGTTCTTCAGTaGTACACTCCAACTAAACTGTACAGTAAGTTCTGC +
Preference number: 3 (lower is better)
Translates to: ISSVNAELTVLQ*YTPTKLYSKFC
Trigger: GCAGAACTTACTGTACAGTTTAGTTGGAGTGTAGCACTGAAGAACTGTCAGCTCAGCGTTGACTGAGGAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360768.5
ENST00000434382.2
ENST00000648179.1
ENST00000648187.1
3UTR-3UTR CAA 90 bp CCCTCTTCTGGGCAGAATCGGAGGTATAGAAAGGAATCTGAATTCTCCAGGGCAGAACACAAACTGGACTaGAACGTTCCAATTCAATTT +
Preference number: 3 (lower is better)
Translates to: PSSGQNRRYRKESEFSRAEHKLD*NVPIQF
Trigger: AAATTGAATTGGAACGTTCAAGTCCAGTTTGTGTTC...TGCCCTGGAGAATTCAGATTCCTTTCTATACCTCCGATTCTGCCCAGAAGAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
3UTR TCA 72 bp AAAACATTACTGCTGCTTCTCAACCAGAGGATTAAGTaGTCACACAGGACCCTTCTGCAGAGTGCAGGTTTT +
Preference number: 3 (lower is better)
Translates to: KTLLLLLNQRIK*SHRTLLQSAGF
Trigger: AAAACCTGCACTCTGCAGAAGGGTCCTGTGTGATCACTTAATCCTCTGGTTGAGAAGCAGCAGTAATGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
3UTR TCA 72 bp TTGAGCTCCAGCACAGAACACACTTGTTCTATTCCGTaGAGTATGGCTCAGCTGTATTTCCAACGGATTCAT +
Preference number: 3 (lower is better)
Translates to: LSSSTEHTCSIP*SMAQLYFQRIH
Trigger: ATGAATCCGTTGGAAATACAGCTGAGCCATACTTCACGGAATAGAACAAGTGTGTTCTGTGCTGGAGCTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
3UTR GCA 72 bp GGAAGGGTAGTTCTCACAATTAGAAACCATAAGTGCTaGCTGAGGTGTCTGAAATGTTTCACCCATGACTGT +
Preference number: 3 (lower is better)
Translates to: GRVVLTIRNHKC*LRCLKCFTHDC
Trigger: ACAGTCATGGGTGAAACATTTCAGACACCTCAGGCAGCACTTATGGTTTCTAATTGTGAGAACTACCCTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
3UTR GCA 72 bp GATGGAAGGGTAGTTCTCACAATTAGAAACCATAAGTaGTGCCTGAGGTGTCTGAAATGTTTCACCCATGAC +
Preference number: 3 (lower is better)
Translates to: DGRVVLTIRNHK*CLRCLKCFTHD
Trigger: GTCATGGGTGAAACATTTCAGACACCTCAGGCAGCACTTATGGTTTCTAATTGTGAGAACTACCCTTCCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
3UTR CCA 72 bp CAATTAACACCCACCAGGATTCTGTTACTGAGACACTaGCATTACAATGCTGTTATGACAGGCAGTACGTGT +
Preference number: 3 (lower is better)
Translates to: QLTPTRILLLRH*HYNAVMTGSTC
Trigger: ACACGTACTGCCTGTCATAACAGCATTGTAATGCCAGTGTCTCAGTAACAGAATCCTGGTGGGTGTTAATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
3UTR-3UTR CAA 90 bp CTGGGCACACAGCTAGTTAAACCTGAGTTATTTCACCGGAAATTTACCTTTAGTTTTTTGCCCTATTATTaGCTGCAACCACGGCTGCCA +
Preference number: 3 (lower is better)
Translates to: LGTQLVKPELFHRKFTFSFLPYY*LQPRLP
Trigger: TGGCAGCCGTGGTTGCAGCAAATAATAGGGCAAAAA...ACTAAAGGTAAATTTCCGGTGAAATAACTCAGGTTTAACTAGCTGTGTGCCCAG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
3UTR GCA 72 bp ATGGCTCAGCTGTATTTCCAACGGATTCATCTTTCTTaGCGATGCTACCTTTTTAGAGGATTATACAGGGAG +
Preference number: 3 (lower is better)
Translates to: MAQLYFQRIHLS*RCYLFRGLYRE
Trigger: CTCCCTGTATAATCCTCTAAAAAGGTAGCATCGGCAAGAAAGATGAATCCGTTGGAAATACAGCTGAGCCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
3UTR CCA 72 bp CCAGCACAGAACACACTTGTTCTATTCCGTGAAGTATaGCTCAGCTGTATTTCCAACGGATTCATCTTTCTT +
Preference number: 3 (lower is better)
Translates to: PAQNTLVLFREV*LSCISNGFIFL
Trigger: AAGAAAGATGAATCCGTTGGAAATACAGCTGAGCCATACTTCACGGAATAGAACAAGTGTGTTCTGTGCTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
3UTR TCA 72 bp TTAAGAAACTGGTTGAAACTGGTGAAAAGTTCATTATaGTTTGGACTTGATACCTGCCTCGGGCCAGAAGAC +
Preference number: 3 (lower is better)
Translates to: LRNWLKLVKSSL*FGLDTCLGPED
Trigger: GTCTTCTGGCCCGAGGCAGGTATCAAGTCCAAATCATAATGAACTTTTCACCAGTTTCAACCAGTTTCTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
3UTR-3UTR CAA 90 bp CTGGGCACACAGCTAGTTAAACCTGAGTTATTTCACCGGAAATTTACCTTTAGTCATAATACTCTTTGCTaGACTGGCACCAACGTTAAG +
Preference number: 3 (lower is better)
Translates to: LGTQLVKPELFHRKFTFSHNTLC*TGTNVK
Trigger: CTTAACGTTGGTGCCAGTCAAGCAAAGAGTATTATG...ACTAAAGGTAAATTTCCGGTGAAATAACTCAGGTTTAACTAGCTGTGTGCCCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
3UTR-3UTR CAA 90 bp CTGGGCACACAGCTAGTTAAACCTGAGTTATTTCACCGGAAATTTACCTTTAGTTTGGAAGCTACGGAATaGTTGCTGACTCTACACATT +
Preference number: 3 (lower is better)
Translates to: LGTQLVKPELFHRKFTFSLEATE*LLTLHI
Trigger: AATGTGTAGAGTCAGCAACAATTCCGTAGCTTCCAA...ACTAAAGGTAAATTTCCGGTGAAATAACTCAGGTTTAACTAGCTGTGTGCCCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
3UTR TCA 72 bp CTTGGACTGGTCTTTTCCATCATAATACTCTTTGCTTaGCTGGCACCAACGTTAAGGAAAAATATCTGCATG +
Preference number: 3 (lower is better)
Translates to: LGLVFSIIILFA*LAPTLRKNICM
Trigger: CATGCAGATATTTTTCCTTAACGTTGGTGCCAGTCAAGCAAAGAGTATTATGATGGAAAAGACCAGTCCAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360768.5
ENST00000434382.2
ENST00000648179.1
ENST00000648187.1
3UTR GCA 72 bp AAAAGACTTCGTTTCAGTTCTTTTGGAATGCAACCCTaGAGTTTAAGAATAATGGGAGCACAACTTCCACAG +
Preference number: 3 (lower is better)
Translates to: KRLRFSSFGMQP*SLRIMGAQLPQ
Trigger: CTGTGGAAGTTGTGCTCCCATTATTCTTAAACTGCAGGGTTGCATTCCAAAAGAACTGAAACGAAGTCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
3UTR GCA 72 bp CAGCTGTATTTCCAACGGATTCATCTTTCTTGCCGATaGTACCTTTTTAGAGGATTATACAGGGAGTATTCA +
Preference number: 3 (lower is better)
Translates to: QLYFQRIHLSCR*YLFRGLYREYS
Trigger: TGAATACTCCCTGTATAATCCTCTAAAAAGGTAGCATCGGCAAGAAAGATGAATCCGTTGGAAATACAGCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
3UTR TCA 72 bp TCAACCCTGTATACCTTAGAAATGAGGTTACAGTATTaGCTTCAAGAATATAAGGCTCCTACTGAGTCTAAA +
Preference number: 3 (lower is better)
Translates to: STLYTLEMRLQY*LQEYKAPTESK
Trigger: TTTAGACTCAGTAGGAGCCTTATATTCTTGAAGTCAATACTGTAACCTCATTTCTAAGGTATACAGGGTTGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
3UTR TCA 72 bp TCAGAAACACTTCAAAGTAAAGTTAAAGCTTGTCTTTaGTTGGCTCGGCGTATCCTTTTTGTATCCATATTT +
Preference number: 3 (lower is better)
Translates to: SETLQSKVKACL*LARRILFVSIF
Trigger: AAATATGGATACAAAAAGGATACGCCGAGCCAATCAAAGACAAGCTTTAACTTTACTTTGAAGTGTTTCTGA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360768.5
ENST00000434382.2
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp GCAAGAACACTGGCTCCCACTCCGGAGCGATGGGGCTTGGACTGGTCTTTTCCACAGTCCTGCTTGGGTTaGAGCTGCCGCTTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: ARTLAPTPERWGLDWSFPQSCLG*SCRFQA
Trigger: GGCCTGGAAGCGGCAGCTGCAACCCAAGCAGGACTG...TGGAAAAGACCAGTCCAAGCCCCATCGCTCCGGAGTGGGAGCCAGTGTTCTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360768.5
ENST00000434382.2
ENST00000648179.1
ENST00000648187.1
CDS-3UTR TCA 90 bp GCAAGAACACTGGCTCCCACTCCGGAGCGATGGGGCTTGGACTGGTCTTTTCCAACTTCTGACCTCAGGTaGTCCAACCGCCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: ARTLAPTPERWGLDWSFPTSDLR*SNRLGL
Trigger: GAGGCCGAGGCGGTTGGATCACCTGAGGTCAGAAGT...TGGAAAAGACCAGTCCAAGCCCCATCGCTCCGGAGTGGGAGCCAGTGTTCTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CCA 90 bp GCAAGAACACTGGCTCCCACTCCGGAGCGATGGGGCTTGGACTGGTCTTTTCCACCCACTCCGGAGCGATaGGGCTTGGACTGGTCTTTT +
Preference number: 4 (lower is better)
Translates to: ARTLAPTPERWGLDWSFPPTPER*GLDWSF
Trigger: AAAAGACCAGTCCAAGCCCCATCGCTCCGGAGTGGG...TGGAAAAGACCAGTCCAAGCCCCATCGCTCCGGAGTGGGAGCCAGTGTTCTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360768.5
ENST00000434382.2
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CCA 90 bp GCAAGAACACTGGCTCCCACTCCGGAGCGATGGGGCTTGGACTGGTCTTTTCCAAGCCTCCCGAGTAGCTaGGATTACAGGGGTGTGCCA +
Preference number: 4 (lower is better)
Translates to: ARTLAPTPERWGLDWSFPSLPSS*DYRGVP
Trigger: TGGCACACCCCTGTAATCCCAGCTACTCGGGAGGCT...TGGAAAAGACCAGTCCAAGCCCCATCGCTCCGGAGTGGGAGCCAGTGTTCTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CCA 90 bp GCAAGAACACTGGCTCCCACTCCGGAGCGATGGGGCTTGGACTGGTCTTTTCCACAGGCTGGAGTGCAATaGCGCAACTGTGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: ARTLAPTPERWGLDWSFPQAGVQ*RNCGSL
Trigger: CAGTGAGCCACAGTTGCGCCATTGCACTCCAGCCTG...TGGAAAAGACCAGTCCAAGCCCCATCGCTCCGGAGTGGGAGCCAGTGTTCTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp CCCTCTTCTGGGCAGAATCGGAGGTATAGAAAGGAATCTGAATTCTCCAGGGCAGTCGGGCGTCAGTCCTaGTTGGGTTGCAGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: PSSGQNRRYRKESEFSRAVGRQS*LGCSCR
Trigger: GCGGCAGCTGCAACCCAAGCAGGACTGACGCCCGAC...TGCCCTGGAGAATTCAGATTCCTTTCTATACCTCCGATTCTGCCCAGAAGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CCA 90 bp GCAAGAACACTGGCTCCCACTCCGGAGCGATGGGGCTTGGACTGGTCTTTTCCATTGAGACTGTTAGGGTaGAGTCTGTCGGGCGTCAGT +
Preference number: 4 (lower is better)
Translates to: ARTLAPTPERWGLDWSFPLRLLG*SLSGVS
Trigger: ACTGACGCCCGACAGACTCCACCCTAACAGTCTCAA...TGGAAAAGACCAGTCCAAGCCCCATCGCTCCGGAGTGGGAGCCAGTGTTCTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360768.5
ENST00000434382.2
ENST00000648179.1
ENST00000648187.1
CDS-3UTR TCA 90 bp GCAAGAACACTGGCTCCCACTCCGGAGCGATGGGGCTTGGACTGGTCTTTTCCATTGCTATTCTCCCGATaGAGCAAACTGGGCAGCATG +
Preference number: 4 (lower is better)
Translates to: ARTLAPTPERWGLDWSFPLLFSR*SKLGSM
Trigger: CATGCTGCCCAGTTTGCTTCATCGGGAGAATAGCAA...TGGAAAAGACCAGTCCAAGCCCCATCGCTCCGGAGTGGGAGCCAGTGTTCTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp GCAAGAACACTGGCTCCCACTCCGGAGCGATGGGGCTTGGACTGGTCTTTTCCATGCCCTATTATTTGCTaGAACCACGGCTGCCAGTAC +
Preference number: 4 (lower is better)
Translates to: ARTLAPTPERWGLDWSFPCPIIC*NHGCQY
Trigger: GTACTGGCAGCCGTGGTTGCAGCAAATAATAGGGCA...TGGAAAAGACCAGTCCAAGCCCCATCGCTCCGGAGTGGGAGCCAGTGTTCTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360768.5
ENST00000434382.2
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp GCAAGAACACTGGCTCCCACTCCGGAGCGATGGGGCTTGGACTGGTCTTTTCCACAGAGTTTCACTCATTaGCCAGGCTGGAGTGCAATG +
Preference number: 4 (lower is better)
Translates to: ARTLAPTPERWGLDWSFPQSFTH*PGWSAM
Trigger: CATTGCACTCCAGCCTGGGCAATGAGTGAAACTCTG...TGGAAAAGACCAGTCCAAGCCCCATCGCTCCGGAGTGGGAGCCAGTGTTCTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CCA 90 bp GCCTTGGACTTGAAGGTCTGGCCACATGACTCATTCTGTAAGGTTAACAACTGGATCCTCGACCCCATCTaGAGGCAAGGGCGGCGGAGC +
Preference number: 4 (lower is better)
Translates to: ALDLKVWPHDSFCKVNNWILDPI*RQGRRS
Trigger: GCTCCGCCGCCCTTGCCTCCAGATGGGGTCGAGGAT...CCAGTTGTTAACCTTACAGAATGAGTCATGTGGCCAGACCTTCAAGTCCAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CCA 90 bp GCCTTGGACTTGAAGGTCTGGCCACATGACTCATTCTGTAAGGTTAACAACTGGGCTTGCTGTCATGCCTaGAGGCAAGGGCGGCGGAGC +
Preference number: 4 (lower is better)
Translates to: ALDLKVWPHDSFCKVNNWACCHA*RQGRRS
Trigger: GCTCCGCCGCCCTTGCCTCCAGGCATGACAGCAAGC...CCAGTTGTTAACCTTACAGAATGAGTCATGTGGCCAGACCTTCAAGTCCAAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434382.2
CDS-3UTR TCA 90 bp GCAAGAACACTGGCTCCCACTCCGGAGCGATGGGGCTTGGACTGGTCTTTTCCACTGACTCTACACATTTaGGTTTACAGAGCAGAGCCC +
Preference number: 4 (lower is better)
Translates to: ARTLAPTPERWGLDWSFPLTLHI*VYRAEP
Trigger: GGGCTCTGCTCTGTAAACTCAAATGTGTAGAGTCAG...TGGAAAAGACCAGTCCAAGCCCCATCGCTCCGGAGTGGGAGCCAGTGTTCTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR TCA 90 bp ATTAGCAAGAACACTGGCTCCCACTCCGGAGCGATGGGGCTTGGACTGGTCTTTCCTTTCCACAGGTCTTaGGCTCCAGCACAGAACACA +
Preference number: 4 (lower is better)
Translates to: ISKNTGSHSGAMGLGLVFPFHRS*APAQNT
Trigger: TGTGTTCTGTGCTGGAGCTCAAGACCTGTGGAAAGG...AAAGACCAGTCCAAGCCCCATCGCTCCGGAGTGGGAGCCAGTGTTCTTGCTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp TTTTTGCCCTATTATTTGCTGCAACCACGGCTGCCAGTACTTTTCACAAGATGCAGGGAGGGGGTGGAGTaGGCAACGGCCGAAGAGGCC +
Preference number: 4 (lower is better)
Translates to: FLPYYLLQPRLPVLFTRCREGVE*ATAEEA
Trigger: GGCCTCTTCGGCCGTTGCGCACTCCACCCCCTCCCT...GCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGCAGCAAATAATAGGGCAAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000360768.5
CDS-3UTR GCA 90 bp GCTGCAACCACGGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTGTCGGGCGTCAGTCCTaGTTGGGTTGCAGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: AATTAASTFHKMLCIGYFVGRQS*LGCSCR
Trigger: GCGGCAGCTGCAACCCAAGCAGGACTGACGCCCGAC...AAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360768.5
ENST00000434382.2
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp ATTAGCAAGAACACTGGCTCCCACTCCGGAGCGATGGGGCTTGGACTGGTCTTTTTCAAGCAATTCTCCTaGCTCAGCCTCTGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: ISKNTGSHSGAMGLGLVFFKQFS*LSLWRS
Trigger: GCTCCTCCAGAGGCTGAGGCAGGAGAATTGCTTGAA...AAAGACCAGTCCAAGCCCCATCGCTCCGGAGTGGGAGCCAGTGTTCTTGCTAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp CCCTCTTCTGGGCAGAATCGGAGGTATAGAAAGGAATCTGAATTCTCCAGGGCAACAGGCATGAGCCATTaGACCCAGTGGGGGCAGTCC +
Preference number: 4 (lower is better)
Translates to: PSSGQNRRYRKESEFSRATGMSH*TQWGQS
Trigger: GGACTGCCCCCACTGGGTGCAATGGCTCATGCCTGT...TGCCCTGGAGAATTCAGATTCCTTTCTATACCTCCGATTCTGCCCAGAAGAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR TCA 90 bp GCAAGAACACTGGCTCCCACTCCGGAGCGATGGGGCTTGGACTGGTCTTTTCCAACTGGCCCAGTTTTATaGCTGAACACAAACTGGACT +
Preference number: 4 (lower is better)
Translates to: ARTLAPTPERWGLDWSFPTGPVL*LNTNWT
Trigger: AGTCCAGTTTGTGTTCAGTCATAAAACTGGGCCAGT...TGGAAAAGACCAGTCCAAGCCCCATCGCTCCGGAGTGGGAGCCAGTGTTCTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360768.5
ENST00000434382.2
ENST00000648179.1
ENST00000648187.1
CDS-3UTR TCA 90 bp GCAAGAACACTGGCTCCCACTCCGGAGCGATGGGGCTTGGACTGGTCTTTTCCACCAGGATTCTGTTACTaGGACACTGGCATTACAATG +
Preference number: 4 (lower is better)
Translates to: ARTLAPTPERWGLDWSFPPGFCY*DTGITM
Trigger: CATTGTAATGCCAGTGTCTCAGTAACAGAATCCTGG...TGGAAAAGACCAGTCCAAGCCCCATCGCTCCGGAGTGGGAGCCAGTGTTCTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp ATTAGCAAGAACACTGGCTCCCACTCCGGAGCGATGGGGCTTGGACTGGTCTTTAAAGAACCAGAGGACTaGCTTGGTAGAGCTGGATGC +
Preference number: 4 (lower is better)
Translates to: ISKNTGSHSGAMGLGLVFKEPED*LGRAGC
Trigger: GCATCCAGCTCTACCAAGGCAGTCCTCTGGTTCTTT...AAAGACCAGTCCAAGCCCCATCGCTCCGGAGTGGGAGCCAGTGTTCTTGCTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp TTTTTGCCCTATTATTTGCTGCAACCACGGCTGCCAGTACTTTTCACAAGATGCCAGCGCTTGCTGTCATaGCTGGAGGCAAGGGCGGCG +
Preference number: 4 (lower is better)
Translates to: FLPYYLLQPRLPVLFTRCQRLLS*LEARAA
Trigger: CGCCGCCCTTGCCTCCAGGCATGACAGCAAGCGCTG...GCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGCAGCAAATAATAGGGCAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434382.2
CDS-3UTR CCA 90 bp CCCTCTTCTGGGCAGAATCGGAGGTATAGAAAGGAATCTGAATTCTCCAGGGCAAGCCTCCCGAGTAGCTaGGATTACAGGGGTGTGCCA +
Preference number: 4 (lower is better)
Translates to: PSSGQNRRYRKESEFSRASLPSS*DYRGVP
Trigger: TGGCACACCCCTGTAATCCCAGCTACTCGGGAGGCT...TGCCCTGGAGAATTCAGATTCCTTTCTATACCTCCGATTCTGCCCAGAAGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CCA 90 bp CCCTCTTCTGGGCAGAATCGGAGGTATAGAAAGGAATCTGAATTCTCCAGGGCATCCTGCCTCAGCCTCTaGAGGAGCTGGCATTACAGG +
Preference number: 4 (lower is better)
Translates to: PSSGQNRRYRKESEFSRASCLSL*RSWHYR
Trigger: CCTGTAATGCCAGCTCCTCCAGAGGCTGAGGCAGGA...TGCCCTGGAGAATTCAGATTCCTTTCTATACCTCCGATTCTGCCCAGAAGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CCA 90 bp CCCTCTTCTGGGCAGAATCGGAGGTATAGAAAGGAATCTGAATTCTCCAGGGCACAGGCTGGAGTGCAATaGCGCAACTGTGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: PSSGQNRRYRKESEFSRAQAGVQ*RNCGSL
Trigger: CAGTGAGCCACAGTTGCGCCATTGCACTCCAGCCTG...TGCCCTGGAGAATTCAGATTCCTTTCTATACCTCCGATTCTGCCCAGAAGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR TCA 90 bp CCCTCTTCTGGGCAGAATCGGAGGTATAGAAAGGAATCTGAATTCTCCAGGGCATGCTCACTTTACAATTaGGGGCAGGGGGCTAGGGCT +
Preference number: 4 (lower is better)
Translates to: PSSGQNRRYRKESEFSRACSLYN*GQGARA
Trigger: AGCCCTAGCCCCCTGCCCTCAATTGTAAAGTGAGCA...TGCCCTGGAGAATTCAGATTCCTTTCTATACCTCCGATTCTGCCCAGAAGAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR TCA 90 bp ATTAGCAAGAACACTGGCTCCCACTCCGGAGCGATGGGGCTTGGACTGGTCTTTGCAGCATGTCAGCCCTaGAGGTTACAAATCCAGTAT +
Preference number: 4 (lower is better)
Translates to: ISKNTGSHSGAMGLGLVFAACQP*RLQIQY
Trigger: ATACTGGATTTGTAACCTTCAGGGCTGACATGCTGC...AAAGACCAGTCCAAGCCCCATCGCTCCGGAGTGGGAGCCAGTGTTCTTGCTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR TCA 90 bp ATTAGCAAGAACACTGGCTCCCACTCCGGAGCGATGGGGCTTGGACTGGTCTTTACGTTGCATCAATTCTaGGTCAGTTGGAAGCTACGG +
Preference number: 4 (lower is better)
Translates to: ISKNTGSHSGAMGLGLVFTLHQF*VSWKLR
Trigger: CCGTAGCTTCCAACTGACTCAGAATTGATGCAACGT...AAAGACCAGTCCAAGCCCCATCGCTCCGGAGTGGGAGCCAGTGTTCTTGCTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR TCA 90 bp GCAAGAACACTGGCTCCCACTCCGGAGCGATGGGGCTTGGACTGGTCTTTTCCAATTACAATGCTGTTATaGCAGGCAGTACGTGTTCCT +
Preference number: 4 (lower is better)
Translates to: ARTLAPTPERWGLDWSFPITMLL*QAVRVP
Trigger: AGGAACACGTACTGCCTGTCATAACAGCATTGTAAT...TGGAAAAGACCAGTCCAAGCCCCATCGCTCCGGAGTGGGAGCCAGTGTTCTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR TCA 90 bp GCAACCACGGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTCACACTTCTGACCTCAGGTaGTCCAACCGCCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: ATTAASTFHKMLCIGYFHTSDLR*SNRLGL
Trigger: GAGGCCGAGGCGGTTGGATCACCTGAGGTCAGAAGT...GTGAAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR TCA 90 bp ATTTGCTGCAACCACGGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTAACTTCTGACCTCAGGTaGTCCAACCGCCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: ICCNHGCQYFSQDAVYRLTSDLR*SNRLGL
Trigger: GAGGCCGAGGCGGTTGGATCACCTGAGGTCAGAAGT...TAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGCAGCAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp GGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTCACTATCTCCTGTCGGGCGTCAGTCCTaGTTGGGTTGCAGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: GCQYFSQDAVYRLFSLSPVGRQS*LGCSCR
Trigger: GCGGCAGCTGCAACCCAAGCAGGACTGACGCCCGAC...AGGAGATAGTGAAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360768.5
ENST00000434382.2
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp ATTAGCAAGAACACTGGCTCCCACTCCGGAGCGATGGGGCTTGGACTGGTCTTTTTTTGCCCTATTATTTaGTGCAACCACGGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: ISKNTGSHSGAMGLGLVFFCPII*CNHGCQ
Trigger: CTGGCAGCCGTGGTTGCAGCAAATAATAGGGCAAAA...AAAGACCAGTCCAAGCCCCATCGCTCCGGAGTGGGAGCCAGTGTTCTTGCTAAT
52% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000360768.5
ENST00000434382.2
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp GCAAGAACACTGGCTCCCACTCCGGAGCGATGGGGCTTGGACTGGTCTTTTCCACCAGAAGACCTACGTTaGATCAATTCTGAGTCAGTT +
Preference number: 4 (lower is better)
Translates to: ARTLAPTPERWGLDWSFPPEDLR*INSESV
Trigger: AACTGACTCAGAATTGATGCAACGTAGGTCTTCTGG...TGGAAAAGACCAGTCCAAGCCCCATCGCTCCGGAGTGGGAGCCAGTGTTCTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp GCAACCACGGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTCACAGGCGTGAGCCACCGTaGCCGGCCGAATGTAGTTTC +
Preference number: 4 (lower is better)
Translates to: ATTAASTFHKMLCIGYFHRREPP*PAECSF
Trigger: GAAACTACATTCGGCCGGGCACGGTGGCTCACGCCT...GTGAAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp GCTGCAACCACGGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTAGGCGTGAGCCACCGTaGCCGGCCGAATGTAGTTTC +
Preference number: 4 (lower is better)
Translates to: AATTAASTFHKMLCIGYFRREPP*PAECSF
Trigger: GAAACTACATTCGGCCGGGCACGGTGGCTCACGCCT...AAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp ATTTGCTGCAACCACGGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTAAGCCGCCACAGCGCTTaGTGTCATGCCTGGAGGCAA +
Preference number: 4 (lower is better)
Translates to: ICCNHGCQYFSQDAVYRLSRHSA*CHAWRQ
Trigger: TTGCCTCCAGGCATGACAGCAAGCGCTGTGGCGGCT...TAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGCAGCAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434382.2
CDS-3UTR CCA 90 bp GCCTTGGACTTGAAGGTCTGGCCACATGACTCATTCTGTAAGGTTAACAACTGGCCCACTCCGGAGCGATaGGGCTTGGACTGGTCTTTT +
Preference number: 4 (lower is better)
Translates to: ALDLKVWPHDSFCKVNNWPTPER*GLDWSF
Trigger: AAAAGACCAGTCCAAGCCCCATCGCTCCGGAGTGGG...CCAGTTGTTAACCTTACAGAATGAGTCATGTGGCCAGACCTTCAAGTCCAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360768.5
ENST00000434382.2
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CCA 90 bp CCCTCTTCTGGGCAGAATCGGAGGTATAGAAAGGAATCTGAATTCTCCAGGGCATGCGCTGCTACAAGATaGCCTCACTGTACAGCCCTC +
Preference number: 4 (lower is better)
Translates to: PSSGQNRRYRKESEFSRACAATR*PHCTAL
Trigger: GAGGGCTGTACAGTGAGGCCATCTTGTAGCAGCGCA...TGCCCTGGAGAATTCAGATTCCTTTCTATACCTCCGATTCTGCCCAGAAGAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CCA 90 bp GCCTTGGACTTGAAGGTCTGGCCACATGACTCATTCTGTAAGGTTAACAACTGGCAGGCTGGAGTGCAATaGCGCAACTGTGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: ALDLKVWPHDSFCKVNNWQAGVQ*RNCGSL
Trigger: CAGTGAGCCACAGTTGCGCCATTGCACTCCAGCCTG...CCAGTTGTTAACCTTACAGAATGAGTCATGTGGCCAGACCTTCAAGTCCAAGGC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp GCTGCAACCACGGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTTTGCCCAGGCTGGAGTaGAATGGCGCAACTGTGGCT +
Preference number: 4 (lower is better)
Translates to: AATTAASTFHKMLCIGYFLPRLE*NGATVA
Trigger: AGCCACAGTTGCGCCATTGCACTCCAGCCTGGGCAA...AAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGCAGC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp CCCTCTTCTGGGCAGAATCGGAGGTATAGAAAGGAATCTGAATTCTCCAGGGCACGGGGCTCCCACCCTTaGCCTTTTTGTTTGATGGAA +
Preference number: 4 (lower is better)
Translates to: PSSGQNRRYRKESEFSRARGSHP*PFCLME
Trigger: TTCCATCAAACAAAAAGGGCAAGGGTGGGAGCCCCG...TGCCCTGGAGAATTCAGATTCCTTTCTATACCTCCGATTCTGCCCAGAAGAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp ATTAGCAAGAACACTGGCTCCCACTCCGGAGCGATGGGGCTTGGACTGGTCTTTTTCAAGCAATTCTCCTaGCTCAGCTTCCTGAATAGC +
Preference number: 4 (lower is better)
Translates to: ISKNTGSHSGAMGLGLVFFKQFS*LSFLNS
Trigger: GCTATTCAGGAAGCTGAGGCAGGAGAATTGCTTGAA...AAAGACCAGTCCAAGCCCCATCGCTCCGGAGTGGGAGCCAGTGTTCTTGCTAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CCA 90 bp GCTGCAACCACGGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTCCCACTCCGGAGCGATaGGGCTTGGACTGGTCTTTT +
Preference number: 4 (lower is better)
Translates to: AATTAASTFHKMLCIGYFPTPER*GLDWSF
Trigger: AAAAGACCAGTCCAAGCCCCATCGCTCCGGAGTGGG...AAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360768.5
ENST00000434382.2
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CCA 90 bp GCTGCAACCACGGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTTCCTGCCTCAGCCTCTaGAGGAGCTGGCATTACAGG +
Preference number: 4 (lower is better)
Translates to: AATTAASTFHKMLCIGYFSCLSL*RSWHYR
Trigger: CCTGTAATGCCAGCTCCTCCAGAGGCTGAGGCAGGA...AAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CCA 90 bp ATTTGCTGCAACCACGGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTAAGCCATTGCACCCAGTaGGGGCAGTCCCTTTCCACA +
Preference number: 4 (lower is better)
Translates to: ICCNHGCQYFSQDAVYRLSHCTQ*GQSLST
Trigger: TGTGGAAAGGGACTGCCCCCACTGGGTGCAATGGCT...TAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGCAGCAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CCA 90 bp GCTGCAACCACGGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTAGCCATTGCACCCAGTaGGGGCAGTCCCTTTCCACA +
Preference number: 4 (lower is better)
Translates to: AATTAASTFHKMLCIGYFSHCTQ*GQSLST
Trigger: TGTGGAAAGGGACTGCCCCCACTGGGTGCAATGGCT...AAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR TCA 90 bp GCCTTGGACTTGAAGGTCTGGCCACATGACTCATTCTGTAAGGTTAACAACTGGCTGATCTCGAACTTCTaGCCTCAGGTGATCCAACCG +
Preference number: 4 (lower is better)
Translates to: ALDLKVWPHDSFCKVNNWLISNF*PQVIQP
Trigger: CGGTTGGATCACCTGAGGTCAGAAGTTCGAGATCAG...CCAGTTGTTAACCTTACAGAATGAGTCATGTGGCCAGACCTTCAAGTCCAAGGC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR TCA 90 bp GCCTTGGACTTGAAGGTCTGGCCACATGACTCATTCTGTAAGGTTAACAACTGGCTATGTCGGTCAGGCTaGTCTCGAACTTCTGACCTC +
Preference number: 4 (lower is better)
Translates to: ALDLKVWPHDSFCKVNNWLCRSG*SRTSDL
Trigger: GAGGTCAGAAGTTCGAGATCAGCCTGACCGACATAG...CCAGTTGTTAACCTTACAGAATGAGTCATGTGGCCAGACCTTCAAGTCCAAGGC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp GCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTCACTATCTCCTCTGCTTGGGTTGCAGCTaGCGCTTCCAGGCCTCGTTC +
Preference number: 4 (lower is better)
Translates to: AASTFHKMLCIGYFHYLLCLGCS*RFQASF
Trigger: GAACGAGGCCTGGAAGCGGCAGCTGCAACCCAAGCA...GAGGAGATAGTGAAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360768.5
ENST00000434382.2
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp CTGGGCACACAGCTAGTTAAACCTGAGTTATTTCACCGGAAATTTACCTTTAGTCAGTCCTGCTTGGGTTaGAGCTGCCGCTTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: LGTQLVKPELFHRKFTFSQSCLG*SCRFQA
Trigger: GGCCTGGAAGCGGCAGCTGCAACCCAAGCAGGACTG...ACTAAAGGTAAATTTCCGGTGAAATAACTCAGGTTTAACTAGCTGTGTGCCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp ACTTTTCACAAGATGCTGTGTATAGGCTATTTTCACTATCTCCTCAGTCAACGCCAGTCCTGCTTGGGTTaGAGCTGCCGCTTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: TFHKMLCIGYFHYLLSQRQSCLG*SCRFQA
Trigger: GGCCTGGAAGCGGCAGCTGCAACCCAAGCAGGACTG...GCGTTGACTGAGGAGATAGTGAAAATAGCCTATACACAGCATCTTGTGAAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360768.5
ENST00000434382.2
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp CCCTCTTCTGGGCAGAATCGGAGGTATAGAAAGGAATCTGAATTCTCCAGGGCATGCCCTATTATTTGCTaGAACCACGGCTGCCAGTAC +
Preference number: 4 (lower is better)
Translates to: PSSGQNRRYRKESEFSRACPIIC*NHGCQY
Trigger: GTACTGGCAGCCGTGGTTGCAGCAAATAATAGGGCA...TGCCCTGGAGAATTCAGATTCCTTTCTATACCTCCGATTCTGCCCAGAAGAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CCA 90 bp TTCTTCAGTGCTACACTCCAACTAAACTGTACAGTAAGTTCTGCAGAAATGGATATCCTCGACCCCATCTaGAGGCAAGGGCGGCGGAGC +
Preference number: 4 (lower is better)
Translates to: FFSATLQLNCTVSSAEMDILDPI*RQGRRS
Trigger: GCTCCGCCGCCCTTGCCTCCAGATGGGGTCGAGGAT...ATCCATTTCTGCAGAACTTACTGTACAGTTTAGTTGGAGTGTAGCACTGAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CCA 90 bp GCAAGAACACTGGCTCCCACTCCGGAGCGATGGGGCTTGGACTGGTCTTTTCCATGTAAGGTTAACAACTaGCCCAGTTTTATGACTGAA +
Preference number: 4 (lower is better)
Translates to: ARTLAPTPERWGLDWSFPCKVNN*PSFMTE
Trigger: TTCAGTCATAAAACTGGGCCAGTTGTTAACCTTACA...TGGAAAAGACCAGTCCAAGCCCCATCGCTCCGGAGTGGGAGCCAGTGTTCTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360768.5
ENST00000434382.2
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CCA 90 bp GCTGCAACCACGGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTTGCGCTGCTACAAGATaGCCTCACTGTACAGCCCTC +
Preference number: 4 (lower is better)
Translates to: AATTAASTFHKMLCIGYFCAATR*PHCTAL
Trigger: GAGGGCTGTACAGTGAGGCCATCTTGTAGCAGCGCA...AAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CCA 90 bp CTGGGCAGCATGTCAGCCCTGAAGGTTACAAATCCAGTATTTGACTGCAAAACATGCGCTGCTACAAGATaGCCTCACTGTACAGCCCTC +
Preference number: 4 (lower is better)
Translates to: LGSMSALKVTNPVFDCKTCAATR*PHCTAL
Trigger: GAGGGCTGTACAGTGAGGCCATCTTGTAGCAGCGCA...TGTTTTGCAGTCAAATACTGGATTTGTAACCTTCAGGGCTGACATGCTGCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CCA 90 bp GCTGCAACCACGGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTCAACCTCCGCCTCCCTaGTTCAAGCAATTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: AATTAASTFHKMLCIGYFQPPPP*FKQFSC
Trigger: GCAGGAGAATTGCTTGAACCAGGGAGGCGGAGGTTG...AAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
3UTR CAA 72 bp GTTGGAAGCTACGGAATTGTTGCTGACTCTACACATTaGAGTTTACAGAGCAGAGCCCGTCCCCTCCCTTCA +
Preference number: 4 (lower is better)
Translates to: VGSYGIVADSTH*SLQSRARPLPS
Trigger: TGAAGGGAGGGGACGGGCTCTGCTCTGTAAACTCAAATGTGTAGAGTCAGCAACAATTCCGTAGCTTCCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR TCA 90 bp ATTTGCTGCAACCACGGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTACTCCTCAGTCAACGCTaGGCTGACAGTTCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: ICCNHGCQYFSQDAVYRLLLSQR*ADSSSV
Trigger: CACTGAAGAACTGTCAGCTCAGCGTTGACTGAGGAG...TAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGCAGCAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360768.5
ENST00000434382.2
ENST00000648179.1
ENST00000648187.1
CDS-3UTR TCA 90 bp GCCTTGGACTTGAAGGTCTGGCCACATGACTCATTCTGTAAGGTTAACAACTGGAGAGCAGTGGCGACATaGGCAGATTTAGCCTTGAGA +
Preference number: 4 (lower is better)
Translates to: ALDLKVWPHDSFCKVNNWRAVAT*ADLALR
Trigger: TCTCAAGGCTAAATCTGCTCATGTCGCCACTGCTCT...CCAGTTGTTAACCTTACAGAATGAGTCATGTGGCCAGACCTTCAAGTCCAAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR TCA 90 bp CTGGGCAGCATGTCAGCCCTGAAGGTTACAAATCCAGTATTTGACTGCAAAACACTGATCTCGAACTTCTaGCCTCAGGTGATCCAACCG +
Preference number: 4 (lower is better)
Translates to: LGSMSALKVTNPVFDCKTLISNF*PQVIQP
Trigger: CGGTTGGATCACCTGAGGTCAGAAGTTCGAGATCAG...TGTTTTGCAGTCAAATACTGGATTTGTAACCTTCAGGGCTGACATGCTGCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR TCA 90 bp GCAACCACGGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTCACCTATGTCGGTCAGGCTaGTCTCGAACTTCTGACCTC +
Preference number: 4 (lower is better)
Translates to: ATTAASTFHKMLCIGYFHLCRSG*SRTSDL
Trigger: GAGGTCAGAAGTTCGAGATCAGCCTGACCGACATAG...GTGAAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR TCA 90 bp GCAACCACGGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTCACCCTTTCCACAGGTCTTaGGCTCCAGCACAGAACACA +
Preference number: 4 (lower is better)
Translates to: ATTAASTFHKMLCIGYFHPFHRS*APAQNT
Trigger: TGTGTTCTGTGCTGGAGCTCAAGACCTGTGGAAAGG...GTGAAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR TCA 90 bp GCTGCAACCACGGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTCCTTTCCACAGGTCTTaGGCTCCAGCACAGAACACA +
Preference number: 4 (lower is better)
Translates to: AATTAASTFHKMLCIGYFPFHRS*APAQNT
Trigger: TGTGTTCTGTGCTGGAGCTCAAGACCTGTGGAAAGG...AAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp GCAACCACGGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTCACCTTGGTAGAGCTGGATaGGCTGCTACAAGATGGCCT +
Preference number: 4 (lower is better)
Translates to: ATTAASTFHKMLCIGYFHLGRAG*AATRWP
Trigger: AGGCCATCTTGTAGCAGCGCATCCAGCTCTACCAAG...GTGAAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp ATTTGCTGCAACCACGGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTACTTGGTAGAGCTGGATaGGCTGCTACAAGATGGCCT +
Preference number: 4 (lower is better)
Translates to: ICCNHGCQYFSQDAVYRLLGRAG*AATRWP
Trigger: AGGCCATCTTGTAGCAGCGCATCCAGCTCTACCAAG...TAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGCAGCAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp GCTGCAACCACGGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTTTCAAGCAATTCTCCTaGCTCAGCCTCTGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: AATTAASTFHKMLCIGYFFKQFS*LSLWRS
Trigger: GCTCCTCCAGAGGCTGAGGCAGGAGAATTGCTTGAA...AAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGCAGC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp GCCTTGGACTTGAAGGTCTGGCCACATGACTCATTCTGTAAGGTTAACAACTGGCAGAGTTTCACTCATTaGCCAGGCTGGAGTGCAATG +
Preference number: 4 (lower is better)
Translates to: ALDLKVWPHDSFCKVNNWQSFTH*PGWSAM
Trigger: CATTGCACTCCAGCCTGGGCAATGAGTGAAACTCTG...CCAGTTGTTAACCTTACAGAATGAGTCATGTGGCCAGACCTTCAAGTCCAAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp GCTGCAACCACGGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTCGGGGCTCCCACCCTTaGCCTTTTTGTTTGATGGAA +
Preference number: 4 (lower is better)
Translates to: AATTAASTFHKMLCIGYFRGSHP*PFCLME
Trigger: TTCCATCAAACAAAAAGGGCAAGGGTGGGAGCCCCG...AAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CCA 90 bp ATTTGCTGCAACCACGGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTGAGACTGTTAGGGTaGAGTCTGTCGGGCGTCAGT +
Preference number: 4 (lower is better)
Translates to: ICCNHGCQYFSQDAVYRLLRLLG*SLSGVS
Trigger: ACTGACGCCCGACAGACTCCACCCTAACAGTCTCAA...TAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGCAGCAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360768.5
ENST00000434382.2
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CCA 90 bp GCTGCAACCACGGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTTTGAGACTGTTAGGGTaGAGTCTGTCGGGCGTCAGT +
Preference number: 4 (lower is better)
Translates to: AATTAASTFHKMLCIGYFLRLLG*SLSGVS
Trigger: ACTGACGCCCGACAGACTCCACCCTAACAGTCTCAA...AAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGCAGC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000360768.5
ENST00000434382.2
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CCA 90 bp GCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTCACTATCTCCTCAGCCATTGCACCCAGTaGGGGCAGTCCCTTTCCACA +
Preference number: 4 (lower is better)
Translates to: AASTFHKMLCIGYFHYLLSHCTQ*GQSLST
Trigger: TGTGGAAAGGGACTGCCCCCACTGGGTGCAATGGCT...GAGGAGATAGTGAAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CCA 90 bp TTTTTGCCCTATTATTTGCTGCAACCACGGCTGCCAGTACTTTTCACAAGATGCCAACCTCCGCCTCCCTaGTTCAAGCAATTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: FLPYYLLQPRLPVLFTRCQPPPP*FKQFSC
Trigger: GCAGGAGAATTGCTTGAACCAGGGAGGCGGAGGTTG...GCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGCAGCAAATAATAGGGCAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR TCA 90 bp CCCTCTTCTGGGCAGAATCGGAGGTATAGAAAGGAATCTGAATTCTCCAGGGCAGTTAAAGCTTGTCTTTaGTTGGCTCGGCGTATCCTT +
Preference number: 4 (lower is better)
Translates to: PSSGQNRRYRKESEFSRAVKACL*LARRIL
Trigger: AAGGATACGCCGAGCCAATCAAAGACAAGCTTTAAC...TGCCCTGGAGAATTCAGATTCCTTTCTATACCTCCGATTCTGCCCAGAAGAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR TCA 90 bp GGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTCACTATCTCCTTGCTCACTTTACAATTaGGGGCAGGGGGCTAGGGCT +
Preference number: 4 (lower is better)
Translates to: GCQYFSQDAVYRLFSLSPCSLYN*GQGARA
Trigger: AGCCCTAGCCCCCTGCCCTCAATTGTAAAGTGAGCA...AGGAGATAGTGAAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000360768.5
ENST00000434382.2
ENST00000648179.1
ENST00000648187.1
CDS-3UTR TCA 90 bp CTGGGCAGCATGTCAGCCCTGAAGGTTACAAATCCAGTATTTGACTGCAAAACACAGTCAACGCTGAGCTaGCAGTTCTTCAGTGCTACA +
Preference number: 4 (lower is better)
Translates to: LGSMSALKVTNPVFDCKTQSTLS*QFFSAT
Trigger: TGTAGCACTGAAGAACTGTCAGCTCAGCGTTGACTG...TGTTTTGCAGTCAAATACTGGATTTGTAACCTTCAGGGCTGACATGCTGCCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR TCA 90 bp GCAACCACGGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTCACCAGTCAACGCTGAGCTaGCAGTTCTTCAGTGCTACA +
Preference number: 4 (lower is better)
Translates to: ATTAASTFHKMLCIGYFHQSTLS*QFFSAT
Trigger: TGTAGCACTGAAGAACTGTCAGCTCAGCGTTGACTG...GTGAAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360768.5
ENST00000434382.2
ENST00000648179.1
ENST00000648187.1
CDS-3UTR TCA 90 bp GCCTTGGACTTGAAGGTCTGGCCACATGACTCATTCTGTAAGGTTAACAACTGGGCAGCATGTCAGCCCTaGAGGTTACAAATCCAGTAT +
Preference number: 4 (lower is better)
Translates to: ALDLKVWPHDSFCKVNNWAACQP*RLQIQY
Trigger: ATACTGGATTTGTAACCTTCAGGGCTGACATGCTGC...CCAGTTGTTAACCTTACAGAATGAGTCATGTGGCCAGACCTTCAAGTCCAAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR TCA 90 bp GCAACCACGGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTCACTTGCTATTCTCCCGATaGAGCAAACTGGGCAGCATG +
Preference number: 4 (lower is better)
Translates to: ATTAASTFHKMLCIGYFHLLFSR*SKLGSM
Trigger: CATGCTGCCCAGTTTGCTTCATCGGGAGAATAGCAA...GTGAAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR TCA 90 bp CTGGGCAGCATGTCAGCCCTGAAGGTTACAAATCCAGTATTTGACTGCAAAACAAGAGCAGTGGCGACATaGGCAGATTTAGCCTTGAGA +
Preference number: 4 (lower is better)
Translates to: LGSMSALKVTNPVFDCKTRAVAT*ADLALR
Trigger: TCTCAAGGCTAAATCTGCTCATGTCGCCACTGCTCT...TGTTTTGCAGTCAAATACTGGATTTGTAACCTTCAGGGCTGACATGCTGCCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR TCA 90 bp GCAACCACGGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTCACAGAGCAGTGGCGACATaGGCAGATTTAGCCTTGAGA +
Preference number: 4 (lower is better)
Translates to: ATTAASTFHKMLCIGYFHRAVAT*ADLALR
Trigger: TCTCAAGGCTAAATCTGCTCATGTCGCCACTGCTCT...GTGAAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR TCA 90 bp GCCTTGGACTTGAAGGTCTGGCCACATGACTCATTCTGTAAGGTTAACAACTGGCTGACTCTACACATTTaGGTTTACAGAGCAGAGCCC +
Preference number: 4 (lower is better)
Translates to: ALDLKVWPHDSFCKVNNWLTLHI*VYRAEP
Trigger: GGGCTCTGCTCTGTAAACTCAAATGTGTAGAGTCAG...CCAGTTGTTAACCTTACAGAATGAGTCATGTGGCCAGACCTTCAAGTCCAAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR TCA 90 bp GCCTTGGACTTGAAGGTCTGGCCACATGACTCATTCTGTAAGGTTAACAACTGGATTATGATTTGGACTTaGTACCTGCCTCGGGCCAGA +
Preference number: 4 (lower is better)
Translates to: ALDLKVWPHDSFCKVNNWIMIWT*YLPRAR
Trigger: TCTGGCCCGAGGCAGGTATCAAGTCCAAATCATAAT...CCAGTTGTTAACCTTACAGAATGAGTCATGTGGCCAGACCTTCAAGTCCAAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR TCA 90 bp ATTTGCTGCAACCACGGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTACTGGAAGGGTCTGGCTaGCCATTTTGCCATGTTTTC +
Preference number: 4 (lower is better)
Translates to: ICCNHGCQYFSQDAVYRLLEGSG*PFCHVF
Trigger: GAAAACATGGCAAAATGGTCAGCCAGACCCTTCCAG...TAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGCAGCAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR TCA 90 bp GCAACCACGGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTCACCTGGAAGGGTCTGGCTaGCCATTTTGCCATGTTTTC +
Preference number: 4 (lower is better)
Translates to: ATTAASTFHKMLCIGYFHLEGSG*PFCHVF
Trigger: GAAAACATGGCAAAATGGTCAGCCAGACCCTTCCAG...GTGAAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR TCA 90 bp TTTTTGCCCTATTATTTGCTGCAACCACGGCTGCCAGTACTTTTCACAAGATGCCTATGTCGGTCAGGCTaGTCTCGAACTTCTGACCTC +
Preference number: 4 (lower is better)
Translates to: FLPYYLLQPRLPVLFTRCLCRSG*SRTSDL
Trigger: GAGGTCAGAAGTTCGAGATCAGCCTGACCGACATAG...GCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGCAGCAAATAATAGGGCAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR TCA 90 bp ATTAGCAAGAACACTGGCTCCCACTCCGGAGCGATGGGGCTTGGACTGGTCTTTGAACTCCATTTTAAATaGCTGTTTACTCTGGAGCTT +
Preference number: 4 (lower is better)
Translates to: ISKNTGSHSGAMGLGLVFELHFK*LFTLEL
Trigger: AAGCTCCAGAGTAAACAGTCATTTAAAATGGAGTTC...AAAGACCAGTCCAAGCCCCATCGCTCCGGAGTGGGAGCCAGTGTTCTTGCTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR TCA 90 bp CTGGGCACACAGCTAGTTAAACCTGAGTTATTTCACCGGAAATTTACCTTTAGTACTCCTGACCTCAAGTaGTCCACCCGCCTCTACCTC +
Preference number: 4 (lower is better)
Translates to: LGTQLVKPELFHRKFTFSTPDLK*STRLYL
Trigger: GAGGTAGAGGCGGGTGGATCACTTGAGGTCAGGAGT...ACTAAAGGTAAATTTCCGGTGAAATAACTCAGGTTTAACTAGCTGTGTGCCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp GCAACCACGGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTCACTGCCCTATTATTTGCTaGAACCACGGCTGCCAGTAC +
Preference number: 4 (lower is better)
Translates to: ATTAASTFHKMLCIGYFHCPIIC*NHGCQY
Trigger: GTACTGGCAGCCGTGGTTGCAGCAAATAATAGGGCA...GTGAAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360768.5
ENST00000434382.2
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp GCCTTGGACTTGAAGGTCTGGCCACATGACTCATTCTGTAAGGTTAACAACTGGTTTTGCCCTATTATTTaGTGCAACCACGGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: ALDLKVWPHDSFCKVNNWFCPII*CNHGCQ
Trigger: CTGGCAGCCGTGGTTGCAGCAAATAATAGGGCAAAA...CCAGTTGTTAACCTTACAGAATGAGTCATGTGGCCAGACCTTCAAGTCCAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360768.5
ENST00000434382.2
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp GCTGCAACCACGGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTAAAGAACCAGAGGACTaGCTTGGTAGAGCTGGATGC +
Preference number: 4 (lower is better)
Translates to: AATTAASTFHKMLCIGYFKEPED*LGRAGC
Trigger: GCATCCAGCTCTACCAAGGCAGTCCTCTGGTTCTTT...AAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp ACTTTTCACAAGATGCTGTGTATAGGCTATTTTCACTATCTCCTCAGTCAACGCTTGCCCAGGCTGGAGTaGAATGGCGCAACTGTGGCT +
Preference number: 4 (lower is better)
Translates to: TFHKMLCIGYFHYLLSQRLPRLE*NGATVA
Trigger: AGCCACAGTTGCGCCATTGCACTCCAGCCTGGGCAA...GCGTTGACTGAGGAGATAGTGAAAATAGCCTATACACAGCATCTTGTGAAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp GCTGCAACCACGGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTCAGAGTTTCACTCATTaGCCAGGCTGGAGTGCAATG +
Preference number: 4 (lower is better)
Translates to: AATTAASTFHKMLCIGYFQSFTH*PGWSAM
Trigger: CATTGCACTCCAGCCTGGGCAATGAGTGAAACTCTG...AAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp ATTAGCAAGAACACTGGCTCCCACTCCGGAGCGATGGGGCTTGGACTGGTCTTTTTTGGAATGCAACCCTaGAGTTTAAGAATAATGGGA +
Preference number: 4 (lower is better)
Translates to: ISKNTGSHSGAMGLGLVFFGMQP*SLRIMG
Trigger: TCCCATTATTCTTAAACTGCAGGGTTGCATTCCAAA...AAAGACCAGTCCAAGCCCCATCGCTCCGGAGTGGGAGCCAGTGTTCTTGCTAAT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp TTCTTCAGTGCTACACTCCAACTAAACTGTACAGTAAGTTCTGCAGAAATGGATACAGGCATGAGCCATTaGACCCAGTGGGGGCAGTCC +
Preference number: 4 (lower is better)
Translates to: FFSATLQLNCTVSSAEMDTGMSH*TQWGQS
Trigger: GGACTGCCCCCACTGGGTGCAATGGCTCATGCCTGT...ATCCATTTCTGCAGAACTTACTGTACAGTTTAGTTGGAGTGTAGCACTGAAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CCA 90 bp TTTTTGCCCTATTATTTGCTGCAACCACGGCTGCCAGTACTTTTCACAAGATGCCGGAGCGATGGGGCTTaGACTGGTCTTTTCCATCAT +
Preference number: 4 (lower is better)
Translates to: FLPYYLLQPRLPVLFTRCRSDGA*TGLFHH
Trigger: ATGATGGAAAAGACCAGTCCAAGCCCCATCGCTCCG...GCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGCAGCAAATAATAGGGCAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000360768.5
ENST00000434382.2
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CCA 90 bp CTGGGCAGCATGTCAGCCCTGAAGGTTACAAATCCAGTATTTGACTGCAAAACAGCAACCTCCACCTACTaGGTTCAAGCAATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: LGSMSALKVTNPVFDCKTATSTY*VQAILL
Trigger: CAGGAGAATTGCTTGAACCCAGTAGGTGGAGGTTGC...TGTTTTGCAGTCAAATACTGGATTTGTAACCTTCAGGGCTGACATGCTGCCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR TCA 90 bp ACTTTTCACAAGATGCTGTGTATAGGCTATTTTCACTATCTCCTCAGTCAACGCTGCTCACTTTACAATTaGGGGCAGGGGGCTAGGGCT +
Preference number: 4 (lower is better)
Translates to: TFHKMLCIGYFHYLLSQRCSLYN*GQGARA
Trigger: AGCCCTAGCCCCCTGCCCTCAATTGTAAAGTGAGCA...GCGTTGACTGAGGAGATAGTGAAAATAGCCTATACACAGCATCTTGTGAAAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000360768.5
ENST00000434382.2
ENST00000648179.1
ENST00000648187.1
CDS-3UTR TCA 90 bp TTTTTGCCCTATTATTTGCTGCAACCACGGCTGCCAGTACTTTTCACAAGATGCCAGTCAACGCTGAGCTaGCAGTTCTTCAGTGCTACA +
Preference number: 4 (lower is better)
Translates to: FLPYYLLQPRLPVLFTRCQSTLS*QFFSAT
Trigger: TGTAGCACTGAAGAACTGTCAGCTCAGCGTTGACTG...GCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGCAGCAAATAATAGGGCAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360768.5
ENST00000434382.2
ENST00000648179.1
ENST00000648187.1
CDS-3UTR TCA 90 bp GGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTCACTATCTCCTCTCCTCAGTCAACGCTaGGCTGACAGTTCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: GCQYFSQDAVYRLFSLSPLLSQR*ADSSSV
Trigger: CACTGAAGAACTGTCAGCTCAGCGTTGACTGAGGAG...AGGAGATAGTGAAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360768.5
ENST00000434382.2
ENST00000648179.1
ENST00000648187.1
CDS-3UTR TCA 90 bp GCAACCACGGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTCACAACCAGAGGATTAAGTaGTCACACAGGACCCTTCTG +
Preference number: 4 (lower is better)
Translates to: ATTAASTFHKMLCIGYFHNQRIK*SHRTLL
Trigger: CAGAAGGGTCCTGTGTGATCACTTAATCCTCTGGTT...GTGAAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR TCA 90 bp GCAACCACGGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTCACACGTTGCATCAATTCTaGGTCAGTTGGAAGCTACGG +
Preference number: 4 (lower is better)
Translates to: ATTAASTFHKMLCIGYFHTLHQF*VSWKLR
Trigger: CCGTAGCTTCCAACTGACTCAGAATTGATGCAACGT...GTGAAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR TCA 90 bp GCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTCACTATCTCCTCCTGATCTCGAACTTCTaGCCTCAGGTGATCCAACCG +
Preference number: 4 (lower is better)
Translates to: AASTFHKMLCIGYFHYLLLISNF*PQVIQP
Trigger: CGGTTGGATCACCTGAGGTCAGAAGTTCGAGATCAG...GAGGAGATAGTGAAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp ATTTGCTGCAACCACGGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATGCTGCAACCACGGCTaGCAGTACTTTTCACAAGAT +
Preference number: 4 (lower is better)
Translates to: ICCNHGCQYFSQDAVYRLCCNHG*QYFSQD
Trigger: ATCTTGTGAAAAGTACTGGCAGCCGTGGTTGCAGCA...TAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGCAGCAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360768.5
ENST00000434382.2
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp AAAGTAAAGTTAAAGCTTGTCTTTGATTGGCTCGGCGTATCCTTTTTGTATCCAAGGCGTGAGCCACCGTaGCCGGCCGAATGTAGTTTC +
Preference number: 4 (lower is better)
Translates to: KVKLKLVFDWLGVSFLYPRREPP*PAECSF
Trigger: GAAACTACATTCGGCCGGGCACGGTGGCTCACGCCT...TGGATACAAAAAGGATACGCCGAGCCAATCAAAGACAAGCTTTAACTTTACTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp GGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTCACTATCTCCTTTGGCCAGGCTGGAGTaGAGTGGCATGATCTTGACT +
Preference number: 4 (lower is better)
Translates to: GCQYFSQDAVYRLFSLSPLARLE*SGMILT
Trigger: AGTCAAGATCATGCCACTGCACTCCAGCCTGGCCAA...AGGAGATAGTGAAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp GCAACCACGGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTCACCAGGTGCCGCCACCATaGCCAGCTAATTTTTGTATT +
Preference number: 4 (lower is better)
Translates to: ATTAASTFHKMLCIGYFHQVPPP*PANFCI
Trigger: AATACAAAAATTAGCTGGGCATGGTGGCGGCACCTG...GTGAAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp GCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTCACTATCTCCTCTTCAAGCAATTCTCCTaGCTCAGCCTCTGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: AASTFHKMLCIGYFHYLLFKQFS*LSLWRS
Trigger: GCTCCTCCAGAGGCTGAGGCAGGAGAATTGCTTGAA...GAGGAGATAGTGAAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CCA 90 bp GCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTCACTATCTCCTCCGGAGCGATGGGGCTTaGACTGGTCTTTTCCATCAT +
Preference number: 4 (lower is better)
Translates to: AASTFHKMLCIGYFHYLLRSDGA*TGLFHH
Trigger: ATGATGGAAAAGACCAGTCCAAGCCCCATCGCTCCG...GAGGAGATAGTGAAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000360768.5
ENST00000434382.2
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CCA 90 bp GCCTTGGACTTGAAGGTCTGGCCACATGACTCATTCTGTAAGGTTAACAACTGGAAAACTGGAAGGGTCTaGCTGACCATTTTGCCATGT +
Preference number: 4 (lower is better)
Translates to: ALDLKVWPHDSFCKVNNWKTGRV*LTILPC
Trigger: ACATGGCAAAATGGTCAGCCAGACCCTTCCAGTTTT...CCAGTTGTTAACCTTACAGAATGAGTCATGTGGCCAGACCTTCAAGTCCAAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CCA 90 bp CCCTCTTCTGGGCAGAATCGGAGGTATAGAAAGGAATCTGAATTCTCCAGGGCAATACAACTGAAACAGTaGTTTCCCCGAGGCTTAGAA +
Preference number: 4 (lower is better)
Translates to: PSSGQNRRYRKESEFSRAIQLKQ*FPRGLE
Trigger: TTCTAAGCCTCGGGGAAACCACTGTTTCAGTTGTAT...TGCCCTGGAGAATTCAGATTCCTTTCTATACCTCCGATTCTGCCCAGAAGAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CCA 90 bp TTCTTCAGTGCTACACTCCAACTAAACTGTACAGTAAGTTCTGCAGAAATGGATAGCCTCCCGAGTAGCTaGGATTACAGGGGTGTGCCA +
Preference number: 4 (lower is better)
Translates to: FFSATLQLNCTVSSAEMDSLPSS*DYRGVP
Trigger: TGGCACACCCCTGTAATCCCAGCTACTCGGGAGGCT...ATCCATTTCTGCAGAACTTACTGTACAGTTTAGTTGGAGTGTAGCACTGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CCA 90 bp ACTTTTCACAAGATGCTGTGTATAGGCTATTTTCACTATCTCCTCAGTCAACGCCAACCTCCGCCTCCCTaGTTCAAGCAATTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: TFHKMLCIGYFHYLLSQRQPPPP*FKQFSC
Trigger: GCAGGAGAATTGCTTGAACCAGGGAGGCGGAGGTTG...GCGTTGACTGAGGAGATAGTGAAAATAGCCTATACACAGCATCTTGTGAAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR TCA 90 bp ATTTGCTGCAACCACGGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTAACTGGCCCAGTTTTATaGCTGAACACAAACTGGACT +
Preference number: 4 (lower is better)
Translates to: ICCNHGCQYFSQDAVYRLTGPVL*LNTNWT
Trigger: AGTCCAGTTTGTGTTCAGTCATAAAACTGGGCCAGT...TAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGCAGCAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360768.5
ENST00000434382.2
ENST00000648179.1
ENST00000648187.1
CDS-3UTR TCA 90 bp GCCTTGGACTTGAAGGTCTGGCCACATGACTCATTCTGTAAGGTTAACAACTGGATAATACTCTTTGCTTaGCTGGCACCAACGTTAAGG +
Preference number: 4 (lower is better)
Translates to: ALDLKVWPHDSFCKVNNWIILFA*LAPTLR
Trigger: CCTTAACGTTGGTGCCAGTCAAGCAAAGAGTATTAT...CCAGTTGTTAACCTTACAGAATGAGTCATGTGGCCAGACCTTCAAGTCCAAGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360768.5
ENST00000434382.2
ENST00000648179.1
ENST00000648187.1
CDS-3UTR TCA 90 bp GGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTCACTATCTCCTTTGCTATTCTCCCGATaGAGCAAACTGGGCAGCATG +
Preference number: 4 (lower is better)
Translates to: GCQYFSQDAVYRLFSLSPLLFSR*SKLGSM
Trigger: CATGCTGCCCAGTTTGCTTCATCGGGAGAATAGCAA...AGGAGATAGTGAAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR TCA 90 bp GGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTCACTATCTCCTGCATGTGTGTCATTATaGGAGCAGTGGCGACATGAG +
Preference number: 4 (lower is better)
Translates to: GCQYFSQDAVYRLFSLSPACVSL*EQWRHE
Trigger: CTCATGTCGCCACTGCTCTCATAATGACACACATGC...AGGAGATAGTGAAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR TCA 90 bp CCCTCTTCTGGGCAGAATCGGAGGTATAGAAAGGAATCTGAATTCTCCAGGGCACTACGGAATTGTTGCTaGCTCTACACATTTGAGTTT +
Preference number: 4 (lower is better)
Translates to: PSSGQNRRYRKESEFSRALRNCC*LYTFEF
Trigger: AAACTCAAATGTGTAGAGTCAGCAACAATTCCGTAG...TGCCCTGGAGAATTCAGATTCCTTTCTATACCTCCGATTCTGCCCAGAAGAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR TCA 90 bp GCCTTGGACTTGAAGGTCTGGCCACATGACTCATTCTGTAAGGTTAACAACTGGTACTCCAACAGCCATTaGAAGATTCACATTCATGGG +
Preference number: 4 (lower is better)
Translates to: ALDLKVWPHDSFCKVNNWYSNSH*KIHIHG
Trigger: CCCATGAATGTGAATCTTTCAATGGCTGTTGGAGTA...CCAGTTGTTAACCTTACAGAATGAGTCATGTGGCCAGACCTTCAAGTCCAAGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR TCA 90 bp CTGGGCAGCATGTCAGCCCTGAAGGTTACAAATCCAGTATTTGACTGCAAAACACCAGGATTCTGTTACTaGGACACTGGCATTACAATG +
Preference number: 4 (lower is better)
Translates to: LGSMSALKVTNPVFDCKTPGFCY*DTGITM
Trigger: CATTGTAATGCCAGTGTCTCAGTAACAGAATCCTGG...TGTTTTGCAGTCAAATACTGGATTTGTAACCTTCAGGGCTGACATGCTGCCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR TCA 90 bp TTTTTGCCCTATTATTTGCTGCAACCACGGCTGCCAGTACTTTTCACAAGATGCGAGAGGACACATGTATaGAGGAACAGTGATTCTGGG +
Preference number: 4 (lower is better)
Translates to: FLPYYLLQPRLPVLFTRCERTHV*RNSDSG
Trigger: CCCAGAATCACTGTTCCTTCATACATGTGTCCTCTC...GCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGCAGCAAATAATAGGGCAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR TCA 90 bp ATTTGCTGCAACCACGGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTACTTGCCCTTTTTGTTTaGTGGAAGGGTAGTTCTCAC +
Preference number: 4 (lower is better)
Translates to: ICCNHGCQYFSQDAVYRLLALFV*WKGSSH
Trigger: GTGAGAACTACCCTTCCATCAAACAAAAAGGGCAAG...TAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGCAGCAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR TCA 90 bp GCCTTGGACTTGAAGGTCTGGCCACATGACTCATTCTGTAAGGTTAACAACTGGACTTGTTCTATTCCGTaGAGTATGGCTCAGCTGTAT +
Preference number: 4 (lower is better)
Translates to: ALDLKVWPHDSFCKVNNWTCSIP*SMAQLY
Trigger: ATACAGCTGAGCCATACTTCACGGAATAGAACAAGT...CCAGTTGTTAACCTTACAGAATGAGTCATGTGGCCAGACCTTCAAGTCCAAGGC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR TCA 90 bp AAAGTAAAGTTAAAGCTTGTCTTTGATTGGCTCGGCGTATCCTTTTTGTATCCAACTCCTGACCTCAAGTaGTCCACCCGCCTCTACCTC +
Preference number: 4 (lower is better)
Translates to: KVKLKLVFDWLGVSFLYPTPDLK*STRLYL
Trigger: GAGGTAGAGGCGGGTGGATCACTTGAGGTCAGGAGT...TGGATACAAAAAGGATACGCCGAGCCAATCAAAGACAAGCTTTAACTTTACTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp GCCTTGGACTTGAAGGTCTGGCCACATGACTCATTCTGTAAGGTTAACAACTGGCTGACAGTTCTTCAGTaGTACACTCCAACTAAACTG +
Preference number: 4 (lower is better)
Translates to: ALDLKVWPHDSFCKVNNWLTVLQ*YTPTKL
Trigger: CAGTTTAGTTGGAGTGTAGCACTGAAGAACTGTCAG...CCAGTTGTTAACCTTACAGAATGAGTCATGTGGCCAGACCTTCAAGTCCAAGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360768.5
ENST00000434382.2
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp ATTTGCTGCAACCACGGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTAGAAGGACACTTCTTCTaGCCAAGGTCAACACACAAA +
Preference number: 4 (lower is better)
Translates to: ICCNHGCQYFSQDAVYRLEGHFF*PRSTHK
Trigger: TTTGTGTGTTGACCTTGGGCAGAAGAAGTGTCCTTC...TAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGCAGCAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp GCTGCAACCACGGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTGAAGGACACTTCTTCTaGCCAAGGTCAACACACAAA +
Preference number: 4 (lower is better)
Translates to: AATTAASTFHKMLCIGYFEGHFF*PRSTHK
Trigger: TTTGTGTGTTGACCTTGGGCAGAAGAAGTGTCCTTC...AAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp CCCTCTTCTGGGCAGAATCGGAGGTATAGAAAGGAATCTGAATTCTCCAGGGCAAAGCAAAAACATTACTaGTGCTTCTCAACCAGAGGA +
Preference number: 4 (lower is better)
Translates to: PSSGQNRRYRKESEFSRAKQKHY*CFSTRG
Trigger: TCCTCTGGTTGAGAAGCAGCAGTAATGTTTTTGCTT...TGCCCTGGAGAATTCAGATTCCTTTCTATACCTCCGATTCTGCCCAGAAGAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp GCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTCACTATCTCCTCTTTGGACTTGATACCTaGCTCGGGCCAGAAGACCTA +
Preference number: 4 (lower is better)
Translates to: AASTFHKMLCIGYFHYLLFGLDT*LGPEDL
Trigger: TAGGTCTTCTGGCCCGAGGCAGGTATCAAGTCCAAA...GAGGAGATAGTGAAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp ACTTTTCACAAGATGCTGTGTATAGGCTATTTTCACTATCTCCTCAGTCAACGCCTTGGTAGAGCTGGATaGGCTGCTACAAGATGGCCT +
Preference number: 4 (lower is better)
Translates to: TFHKMLCIGYFHYLLSQRLGRAG*AATRWP
Trigger: AGGCCATCTTGTAGCAGCGCATCCAGCTCTACCAAG...GCGTTGACTGAGGAGATAGTGAAAATAGCCTATACACAGCATCTTGTGAAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp ACTTTTCACAAGATGCTGTGTATAGGCTATTTTCACTATCTCCTCAGTCAACGCTTGGCCAGGCTGGAGTaGAGTGGCATGATCTTGACT +
Preference number: 4 (lower is better)
Translates to: TFHKMLCIGYFHYLLSQRLARLE*SGMILT
Trigger: AGTCAAGATCATGCCACTGCACTCCAGCCTGGCCAA...GCGTTGACTGAGGAGATAGTGAAAATAGCCTATACACAGCATCTTGTGAAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp CTGGGCACACAGCTAGTTAAACCTGAGTTATTTCACCGGAAATTTACCTTTAGTCGGGGCTCCCACCCTTaGCCTTTTTGTTTGATGGAA +
Preference number: 4 (lower is better)
Translates to: LGTQLVKPELFHRKFTFSRGSHP*PFCLME
Trigger: TTCCATCAAACAAAAAGGGCAAGGGTGGGAGCCCCG...ACTAAAGGTAAATTTCCGGTGAAATAACTCAGGTTTAACTAGCTGTGTGCCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp ACTCCAACTAAACTGTACAGTAAGTTCTGCAGAAATGGATCTAATATTTCTACCACAGGCATGAGCCATTaGACCCAGTGGGGGCAGTCC +
Preference number: 4 (lower is better)
Translates to: TPTKLYSKFCRNGSNISTTGMSH*TQWGQS
Trigger: GGACTGCCCCCACTGGGTGCAATGGCTCATGCCTGT...GGTAGAAATATTAGATCCATTTCTGCAGAACTTACTGTACAGTTTAGTTGGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp GCTGCAACCACGGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTTTCAAGCAATTCTCCTaGCTCAGCTTCCTGAATAGC +
Preference number: 4 (lower is better)
Translates to: AATTAASTFHKMLCIGYFFKQFS*LSFLNS
Trigger: GCTATTCAGGAAGCTGAGGCAGGAGAATTGCTTGAA...AAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGCAGC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CCA 90 bp CTGGGCACACAGCTAGTTAAACCTGAGTTATTTCACCGGAAATTTACCTTTAGTCGGAGCGATGGGGCTTaGACTGGTCTTTTCCATCAT +
Preference number: 4 (lower is better)
Translates to: LGTQLVKPELFHRKFTFSRSDGA*TGLFHH
Trigger: ATGATGGAAAAGACCAGTCCAAGCCCCATCGCTCCG...ACTAAAGGTAAATTTCCGGTGAAATAACTCAGGTTTAACTAGCTGTGTGCCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CCA 90 bp GCTGCAACCACGGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTAAAACTGGAAGGGTCTaGCTGACCATTTTGCCATGT +
Preference number: 4 (lower is better)
Translates to: AATTAASTFHKMLCIGYFKTGRV*LTILPC
Trigger: ACATGGCAAAATGGTCAGCCAGACCCTTCCAGTTTT...AAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CCA 90 bp GGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTCACTATCTCCTGCAACCTCCACCTACTaGGTTCAAGCAATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: GCQYFSQDAVYRLFSLSPATSTY*VQAILL
Trigger: CAGGAGAATTGCTTGAACCCAGTAGGTGGAGGTTGC...AGGAGATAGTGAAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CCA 90 bp CCCTCTTCTGGGCAGAATCGGAGGTATAGAAAGGAATCTGAATTCTCCAGGGCAAGTGGGTCTCCTTGTTaGCATCTAATAATGATCTTC +
Preference number: 4 (lower is better)
Translates to: PSSGQNRRYRKESEFSRASGSPC*HLIMIF
Trigger: GAAGATCATTATTAGATGCCAACAAGGAGACCCACT...TGCCCTGGAGAATTCAGATTCCTTTCTATACCTCCGATTCTGCCCAGAAGAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CCA 90 bp GCTGCAACCACGGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTTACCAGAAATCACAGTaGGTCTCCTTGTTGGCATCT +
Preference number: 4 (lower is better)
Translates to: AATTAASTFHKMLCIGYFYQKSQ*VSLLAS
Trigger: AGATGCCAACAAGGAGACCCACTGTGATTTCTGGTA...AAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CCA 90 bp ATTTGCTGCAACCACGGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATACCAGAAATCACAGTaGGTCTCCTTGTTGGCATCT +
Preference number: 4 (lower is better)
Translates to: ICCNHGCQYFSQDAVYRLYQKSQ*VSLLAS
Trigger: AGATGCCAACAAGGAGACCCACTGTGATTTCTGGTA...TAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGCAGCAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CCA 90 bp CCCTCTTCTGGGCAGAATCGGAGGTATAGAAAGGAATCTGAATTCTCCAGGGCATCGTTTCAGTTCTTTTaGAATGCAACCCTGCAGTTT +
Preference number: 4 (lower is better)
Translates to: PSSGQNRRYRKESEFSRASFQFF*NATLQF
Trigger: AAACTGCAGGGTTGCATTCCAAAAGAACTGAAACGA...TGCCCTGGAGAATTCAGATTCCTTTCTATACCTCCGATTCTGCCCAGAAGAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
3UTR CAA 72 bp GGCCAGAAGACCTACGTTGCATCAATTCTGAGTCAGTaGGAAGCTACGGAATTGTTGCTGACTCTACACATT +
Preference number: 4 (lower is better)
Translates to: GQKTYVASILSQ*EATELLLTLHI
Trigger: AATGTGTAGAGTCAGCAACAATTCCGTAGCTTCCAACTGACTCAGAATTGATGCAACGTAGGTCTTCTGGCC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
3UTR CAA 72 bp CTTTCCACAGGTCTTGAGCTCCAGCACAGAACACACTaGTTCTATTCCGTGAAGTATGGCTCAGCTGTATTT +
Preference number: 4 (lower is better)
Translates to: LSTGLELQHRTH*FYSVKYGSAVF
Trigger: AAATACAGCTGAGCCATACTTCACGGAATAGAACAAGTGTGTTCTGTGCTGGAGCTCAAGACCTGTGGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR TCA 90 bp GCTGCAACCACGGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTTGCTGCAAAATAAACTaGATGGAAAGGGGCTTGAGA +
Preference number: 4 (lower is better)
Translates to: AATTAASTFHKMLCIGYFCCKIN*MERGLR
Trigger: TCTCAAGCCCCTTTCCATTCAGTTTATTTTGCAGCA...AAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000360768.5
ENST00000434382.2
ENST00000648179.1
ENST00000648187.1
CDS-3UTR TCA 90 bp ATTTGCTGCAACCACGGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTAATAATACTCTTTGCTTaGCTGGCACCAACGTTAAGG +
Preference number: 4 (lower is better)
Translates to: ICCNHGCQYFSQDAVYRLIILFA*LAPTLR
Trigger: CCTTAACGTTGGTGCCAGTCAAGCAAAGAGTATTAT...TAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGCAGCAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360768.5
ENST00000434382.2
ENST00000648179.1
ENST00000648187.1
CDS-3UTR TCA 90 bp GCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTCACTATCTCCTCAACCAGAGGATTAAGTaGTCACACAGGACCCTTCTG +
Preference number: 4 (lower is better)
Translates to: AASTFHKMLCIGYFHYLLNQRIK*SHRTLL
Trigger: CAGAAGGGTCCTGTGTGATCACTTAATCCTCTGGTT...GAGGAGATAGTGAAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR TCA 90 bp GGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTCACTATCTCCTACGTTGCATCAATTCTaGGTCAGTTGGAAGCTACGG +
Preference number: 4 (lower is better)
Translates to: GCQYFSQDAVYRLFSLSPTLHQF*VSWKLR
Trigger: CCGTAGCTTCCAACTGACTCAGAATTGATGCAACGT...AGGAGATAGTGAAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR TCA 90 bp GCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTCACTATCTCCTCATTATGATTTGGACTTaGTACCTGCCTCGGGCCAGA +
Preference number: 4 (lower is better)
Translates to: AASTFHKMLCIGYFHYLLIMIWT*YLPRAR
Trigger: TCTGGCCCGAGGCAGGTATCAAGTCCAAATCATAAT...GAGGAGATAGTGAAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR TCA 90 bp ATTTGCTGCAACCACGGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATACTCCAACAGCCATTaGAAGATTCACATTCATGGG +
Preference number: 4 (lower is better)
Translates to: ICCNHGCQYFSQDAVYRLYSNSH*KIHIHG
Trigger: CCCATGAATGTGAATCTTTCAATGGCTGTTGGAGTA...TAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGCAGCAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR TCA 90 bp GCTGCAACCACGGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTTACTCCAACAGCCATTaGAAGATTCACATTCATGGG +
Preference number: 4 (lower is better)
Translates to: AATTAASTFHKMLCIGYFYSNSH*KIHIHG
Trigger: CCCATGAATGTGAATCTTTCAATGGCTGTTGGAGTA...AAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR TCA 90 bp GCTGCAACCACGGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTATTACAATGCTGTTATaGCAGGCAGTACGTGTTCCT +
Preference number: 4 (lower is better)
Translates to: AATTAASTFHKMLCIGYFITMLL*QAVRVP
Trigger: AGGAACACGTACTGCCTGTCATAACAGCATTGTAAT...AAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR TCA 90 bp TTTTTGCCCTATTATTTGCTGCAACCACGGCTGCCAGTACTTTTCACAAGATGCCTTGCCCTTTTTGTTTaGTGGAAGGGTAGTTCTCAC +
Preference number: 4 (lower is better)
Translates to: FLPYYLLQPRLPVLFTRCLALFV*WKGSSH
Trigger: GTGAGAACTACCCTTCCATCAAACAAAAAGGGCAAG...GCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGCAGCAAATAATAGGGCAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR TCA 90 bp CCCTCTTCTGGGCAGAATCGGAGGTATAGAAAGGAATCTGAATTCTCCAGGGCAGAACTCCATTTTAAATaGCTGTTTACTCTGGAGCTT +
Preference number: 4 (lower is better)
Translates to: PSSGQNRRYRKESEFSRAELHFK*LFTLEL
Trigger: AAGCTCCAGAGTAAACAGTCATTTAAAATGGAGTTC...TGCCCTGGAGAATTCAGATTCCTTTCTATACCTCCGATTCTGCCCAGAAGAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp GCAACCACGGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTCACCTGACAGTTCTTCAGTaGTACACTCCAACTAAACTG +
Preference number: 4 (lower is better)
Translates to: ATTAASTFHKMLCIGYFHLTVLQ*YTPTKL
Trigger: CAGTTTAGTTGGAGTGTAGCACTGAAGAACTGTCAG...GTGAAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360768.5
ENST00000434382.2
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp CTGGGCAGCATGTCAGCCCTGAAGGTTACAAATCCAGTATTTGACTGCAAAACACTGACAGTTCTTCAGTaGTACACTCCAACTAAACTG +
Preference number: 4 (lower is better)
Translates to: LGSMSALKVTNPVFDCKTLTVLQ*YTPTKL
Trigger: CAGTTTAGTTGGAGTGTAGCACTGAAGAACTGTCAG...TGTTTTGCAGTCAAATACTGGATTTGTAACCTTCAGGGCTGACATGCTGCCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp GGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTCACTATCTCCTTGCTGCAACCACGGCTaGCAGTACTTTTCACAAGAT +
Preference number: 4 (lower is better)
Translates to: GCQYFSQDAVYRLFSLSPCCNHG*QYFSQD
Trigger: ATCTTGTGAAAAGTACTGGCAGCCGTGGTTGCAGCA...AGGAGATAGTGAAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360768.5
ENST00000434382.2
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp GGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTCACTATCTCCTTTTTGCCCTATTATTTaGTGCAACCACGGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: GCQYFSQDAVYRLFSLSPFCPII*CNHGCQ
Trigger: CTGGCAGCCGTGGTTGCAGCAAATAATAGGGCAAAA...AGGAGATAGTGAAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000360768.5
ENST00000434382.2
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp TTTTTGCCCTATTATTTGCTGCAACCACGGCTGCCAGTACTTTTCACAAGATGCGATGTGTCTACCTGTTaGTATTCTCCCGATGAAGCA +
Preference number: 4 (lower is better)
Translates to: FLPYYLLQPRLPVLFTRCDVSTC*YSPDEA
Trigger: TGCTTCATCGGGAGAATAGCAACAGGTAGACACATC...GCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGCAGCAAATAATAGGGCAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp ACTTTTCACAAGATGCTGTGTATAGGCTATTTTCACTATCTCCTCAGTCAACGCTTTGGACTTGATACCTaGCTCGGGCCAGAAGACCTA +
Preference number: 4 (lower is better)
Translates to: TFHKMLCIGYFHYLLSQRFGLDT*LGPEDL
Trigger: TAGGTCTTCTGGCCCGAGGCAGGTATCAAGTCCAAA...GCGTTGACTGAGGAGATAGTGAAAATAGCCTATACACAGCATCTTGTGAAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CCA 90 bp ACTCCAACTAAACTGTACAGTAAGTTCTGCAGAAATGGATCTAATATTTCTACCCCCACTCCGGAGCGATaGGGCTTGGACTGGTCTTTT +
Preference number: 4 (lower is better)
Translates to: TPTKLYSKFCRNGSNISTPTPER*GLDWSF
Trigger: AAAAGACCAGTCCAAGCCCCATCGCTCCGGAGTGGG...GGTAGAAATATTAGATCCATTTCTGCAGAACTTACTGTACAGTTTAGTTGGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360768.5
ENST00000434382.2
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CCA 90 bp TTTTTGCCCTATTATTTGCTGCAACCACGGCTGCCAGTACTTTTCACAAGATGCAAGCAAAGGAAAAACTaGAAGGGTCTGGCTGACCAT +
Preference number: 4 (lower is better)
Translates to: FLPYYLLQPRLPVLFTRCKQRKN*KGLADH
Trigger: ATGGTCAGCCAGACCCTTCCAGTTTTTCCTTTGCTT...GCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGCAGCAAATAATAGGGCAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CCA 90 bp CCCTCTTCTGGGCAGAATCGGAGGTATAGAAAGGAATCTGAATTCTCCAGGGCATGGGCCATAGGAATGTaGCAAAAGTTTTTATACAAC +
Preference number: 4 (lower is better)
Translates to: PSSGQNRRYRKESEFSRAWAIGM*QKFLYN
Trigger: GTTGTATAAAAACTTTTGCCACATTCCTATGGCCCA...TGCCCTGGAGAATTCAGATTCCTTTCTATACCTCCGATTCTGCCCAGAAGAGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CCA 90 bp ACTTTTCACAAGATGCTGTGTATAGGCTATTTTCACTATCTCCTCAGTCAACGCGCAACCTCCACCTACTaGGTTCAAGCAATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: TFHKMLCIGYFHYLLSQRATSTY*VQAILL
Trigger: CAGGAGAATTGCTTGAACCCAGTAGGTGGAGGTTGC...GCGTTGACTGAGGAGATAGTGAAAATAGCCTATACACAGCATCTTGTGAAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CCA 90 bp GCCTTGGACTTGAAGGTCTGGCCACATGACTCATTCTGTAAGGTTAACAACTGGTCGTTTCAGTTCTTTTaGAATGCAACCCTGCAGTTT +
Preference number: 4 (lower is better)
Translates to: ALDLKVWPHDSFCKVNNWSFQFF*NATLQF
Trigger: AAACTGCAGGGTTGCATTCCAAAAGAACTGAAACGA...CCAGTTGTTAACCTTACAGAATGAGTCATGTGGCCAGACCTTCAAGTCCAAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR TCA 90 bp TTTTTGCCCTATTATTTGCTGCAACCACGGCTGCCAGTACTTTTCACAAGATGCTGCTGCAAAATAAACTaGATGGAAAGGGGCTTGAGA +
Preference number: 4 (lower is better)
Translates to: FLPYYLLQPRLPVLFTRCCCKIN*MERGLR
Trigger: TCTCAAGCCCCTTTCCATTCAGTTTATTTTGCAGCA...GCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGCAGCAAATAATAGGGCAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000360768.5
ENST00000434382.2
ENST00000648179.1
ENST00000648187.1
CDS-3UTR TCA 90 bp TTTTTGCCCTATTATTTGCTGCAACCACGGCTGCCAGTACTTTTCACAAGATGCGCCCAGTTTTATGACTaGACACAAACTGGACTTGAA +
Preference number: 4 (lower is better)
Translates to: FLPYYLLQPRLPVLFTRCAQFYD*TQTGLE
Trigger: TTCAAGTCCAGTTTGTGTTCAGTCATAAAACTGGGC...GCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGCAGCAAATAATAGGGCAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000360768.5
ENST00000434382.2
ENST00000648179.1
ENST00000648187.1
CDS-3UTR TCA 90 bp GGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTCACTATCTCCTACTGGCCCAGTTTTATaGCTGAACACAAACTGGACT +
Preference number: 4 (lower is better)
Translates to: GCQYFSQDAVYRLFSLSPTGPVL*LNTNWT
Trigger: AGTCCAGTTTGTGTTCAGTCATAAAACTGGGCCAGT...AGGAGATAGTGAAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360768.5
ENST00000434382.2
ENST00000648179.1
ENST00000648187.1
CDS-3UTR TCA 90 bp GCCTTGGACTTGAAGGTCTGGCCACATGACTCATTCTGTAAGGTTAACAACTGGGTGAAAAGTTCATTATaGTTTGGACTTGATACCTGC +
Preference number: 4 (lower is better)
Translates to: ALDLKVWPHDSFCKVNNWVKSSL*FGLDTC
Trigger: GCAGGTATCAAGTCCAAATCATAATGAACTTTTCAC...CCAGTTGTTAACCTTACAGAATGAGTCATGTGGCCAGACCTTCAAGTCCAAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR TCA 90 bp GCCTTGGACTTGAAGGTCTGGCCACATGACTCATTCTGTAAGGTTAACAACTGGCAGAACTGTAGGCAGTaGCACATTTTTGTCATTAAT +
Preference number: 4 (lower is better)
Translates to: ALDLKVWPHDSFCKVNNWQNCRQ*HIFVIN
Trigger: ATTAATGACAAAAATGTGTCACTGCCTACAGTTCTG...CCAGTTGTTAACCTTACAGAATGAGTCATGTGGCCAGACCTTCAAGTCCAAGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp TTTTTGCCCTATTATTTGCTGCAACCACGGCTGCCAGTACTTTTCACAAGATGCCAGCGCTTGCTGTCATaGCAAGTAATAACTGTAGTA +
Preference number: 4 (lower is better)
Translates to: FLPYYLLQPRLPVLFTRCQRLLS*QVITVV
Trigger: TACTACAGTTATTACTTGGCATGACAGCAAGCGCTG...GCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGCAGCAAATAATAGGGCAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp ACTTTTCACAAGATGCTGTGTATAGGCTATTTTCACTATCTCCTCAGTCAACGCTGCTGCAACCACGGCTaGCAGTACTTTTCACAAGAT +
Preference number: 4 (lower is better)
Translates to: TFHKMLCIGYFHYLLSQRCCNHG*QYFSQD
Trigger: ATCTTGTGAAAAGTACTGGCAGCCGTGGTTGCAGCA...GCGTTGACTGAGGAGATAGTGAAAATAGCCTATACACAGCATCTTGTGAAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360768.5
ENST00000434382.2
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp ATTTGCTGCAACCACGGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTACATCATAATACTCTTTaGTTGACTGGCACCAACGTT +
Preference number: 4 (lower is better)
Translates to: ICCNHGCQYFSQDAVYRLHHNTL*LTGTNV
Trigger: AACGTTGGTGCCAGTCAAGCAAAGAGTATTATGATG...TAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGCAGCAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360768.5
ENST00000434382.2
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp GCAACCACGGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTCACCATCATAATACTCTTTaGTTGACTGGCACCAACGTT +
Preference number: 4 (lower is better)
Translates to: ATTAASTFHKMLCIGYFHHHNTL*LTGTNV
Trigger: AACGTTGGTGCCAGTCAAGCAAAGAGTATTATGATG...GTGAAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360768.5
ENST00000434382.2
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp GGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTCACTATCTCCTGATGTGTCTACCTGTTaGTATTCTCCCGATGAAGCA +
Preference number: 4 (lower is better)
Translates to: GCQYFSQDAVYRLFSLSPDVSTC*YSPDEA
Trigger: TGCTTCATCGGGAGAATAGCAACAGGTAGACACATC...AGGAGATAGTGAAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp GCCTTGGACTTGAAGGTCTGGCCACATGACTCATTCTGTAAGGTTAACAACTGGCAAAAACATTACTGCTaGTTCTCAACCAGAGGATTA +
Preference number: 4 (lower is better)
Translates to: ALDLKVWPHDSFCKVNNWQKHYC*FSTRGL
Trigger: TAATCCTCTGGTTGAGAAGCAGCAGTAATGTTTTTG...CCAGTTGTTAACCTTACAGAATGAGTCATGTGGCCAGACCTTCAAGTCCAAGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp CTGGGCAGCATGTCAGCCCTGAAGGTTACAAATCCAGTATTTGACTGCAAAACAATTAGAAACCATAAGTaGTGCCTGAGGTGTCTGAAA +
Preference number: 4 (lower is better)
Translates to: LGSMSALKVTNPVFDCKTIRNHK*CLRCLK
Trigger: TTTCAGACACCTCAGGCAGCACTTATGGTTTCTAAT...TGTTTTGCAGTCAAATACTGGATTTGTAACCTTCAGGGCTGACATGCTGCCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp GCAACCACGGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTCACATTAGAAACCATAAGTaGTGCCTGAGGTGTCTGAAA +
Preference number: 4 (lower is better)
Translates to: ATTAASTFHKMLCIGYFHIRNHK*CLRCLK
Trigger: TTTCAGACACCTCAGGCAGCACTTATGGTTTCTAAT...GTGAAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp CCCTCTTCTGGGCAGAATCGGAGGTATAGAAAGGAATCTGAATTCTCCAGGGCACAGTTAGCAAAACAGTaGCTTAAATCTCTGATAAAG +
Preference number: 4 (lower is better)
Translates to: PSSGQNRRYRKESEFSRAQLAKQ*LKSLIK
Trigger: CTTTATCAGAGATTTAAGGCACTGTTTTGCTAACTG...TGCCCTGGAGAATTCAGATTCCTTTCTATACCTCCGATTCTGCCCAGAAGAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp GCCTTGGACTTGAAGGTCTGGCCACATGACTCATTCTGTAAGGTTAACAACTGGTTTGGAATGCAACCCTaGAGTTTAAGAATAATGGGA +
Preference number: 4 (lower is better)
Translates to: ALDLKVWPHDSFCKVNNWFGMQP*SLRIMG
Trigger: TCCCATTATTCTTAAACTGCAGGGTTGCATTCCAAA...CCAGTTGTTAACCTTACAGAATGAGTCATGTGGCCAGACCTTCAAGTCCAAGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp ATTTGCTGCAACCACGGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTACGGATTCATCTTTCTTaGCGATGCTACCTTTTTAGA +
Preference number: 4 (lower is better)
Translates to: ICCNHGCQYFSQDAVYRLRIHLS*RCYLFR
Trigger: TCTAAAAAGGTAGCATCGGCAAGAAAGATGAATCCG...TAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGCAGCAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CCA 90 bp GCTGCAACCACGGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTCTGTTACTGAGACACTaGCATTACAATGCTGTTATG +
Preference number: 4 (lower is better)
Translates to: AATTAASTFHKMLCIGYFLLLRH*HYNAVM
Trigger: CATAACAGCATTGTAATGCCAGTGTCTCAGTAACAG...AAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CCA 90 bp GGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTCACTATCTCCTTACCAGAAATCACAGTaGGTCTCCTTGTTGGCATCT +
Preference number: 4 (lower is better)
Translates to: GCQYFSQDAVYRLFSLSPYQKSQ*VSLLAS
Trigger: AGATGCCAACAAGGAGACCCACTGTGATTTCTGGTA...AGGAGATAGTGAAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR TCA 90 bp GGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTCACTATCTCCTATAATACTCTTTGCTTaGCTGGCACCAACGTTAAGG +
Preference number: 4 (lower is better)
Translates to: GCQYFSQDAVYRLFSLSPIILFA*LAPTLR
Trigger: CCTTAACGTTGGTGCCAGTCAAGCAAAGAGTATTAT...AGGAGATAGTGAAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360768.5
ENST00000434382.2
ENST00000648179.1
ENST00000648187.1
CDS-3UTR TCA 90 bp AAAGTAAAGTTAAAGCTTGTCTTTGATTGGCTCGGCGTATCCTTTTTGTATCCAGCATGTGTGTCATTATaGGAGCAGTGGCGACATGAG +
Preference number: 4 (lower is better)
Translates to: KVKLKLVFDWLGVSFLYPACVSL*EQWRHE
Trigger: CTCATGTCGCCACTGCTCTCATAATGACACACATGC...TGGATACAAAAAGGATACGCCGAGCCAATCAAAGACAAGCTTTAACTTTACTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR TCA 90 bp TTCTTCAGTGCTACACTCCAACTAAACTGTACAGTAAGTTCTGCAGAAATGGATCTGACTCTACACATTTaGGTTTACAGAGCAGAGCCC +
Preference number: 4 (lower is better)
Translates to: FFSATLQLNCTVSSAEMDLTLHI*VYRAEP
Trigger: GGGCTCTGCTCTGTAAACTCAAATGTGTAGAGTCAG...ATCCATTTCTGCAGAACTTACTGTACAGTTTAGTTGGAGTGTAGCACTGAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR TCA 90 bp CTGGGCAGCATGTCAGCCCTGAAGGTTACAAATCCAGTATTTGACTGCAAAACAGTGAAAAGTTCATTATaGTTTGGACTTGATACCTGC +
Preference number: 4 (lower is better)
Translates to: LGSMSALKVTNPVFDCKTVKSSL*FGLDTC
Trigger: GCAGGTATCAAGTCCAAATCATAATGAACTTTTCAC...TGTTTTGCAGTCAAATACTGGATTTGTAACCTTCAGGGCTGACATGCTGCCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR TCA 90 bp GGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTCACTATCTCCTATTACAATGCTGTTATaGCAGGCAGTACGTGTTCCT +
Preference number: 4 (lower is better)
Translates to: GCQYFSQDAVYRLFSLSPITMLL*QAVRVP
Trigger: AGGAACACGTACTGCCTGTCATAACAGCATTGTAAT...AGGAGATAGTGAAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR TCA 90 bp TTCTTCAGTGCTACACTCCAACTAAACTGTACAGTAAGTTCTGCAGAAATGGATGAGAGGACACATGTATaGAGGAACAGTGATTCTGGG +
Preference number: 4 (lower is better)
Translates to: FFSATLQLNCTVSSAEMDERTHV*RNSDSG
Trigger: CCCAGAATCACTGTTCCTTCATACATGTGTCCTCTC...ATCCATTTCTGCAGAACTTACTGTACAGTTTAGTTGGAGTGTAGCACTGAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR TCA 90 bp CTGGGCACACAGCTAGTTAAACCTGAGTTATTTCACCGGAAATTTACCTTTAGTCTTGCCCTTTTTGTTTaGTGGAAGGGTAGTTCTCAC +
Preference number: 4 (lower is better)
Translates to: LGTQLVKPELFHRKFTFSLALFV*WKGSSH
Trigger: GTGAGAACTACCCTTCCATCAAACAAAAAGGGCAAG...ACTAAAGGTAAATTTCCGGTGAAATAACTCAGGTTTAACTAGCTGTGTGCCCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR TCA 90 bp ATTTGCTGCAACCACGGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTACAGAACTGTAGGCAGTaGCACATTTTTGTCATTAAT +
Preference number: 4 (lower is better)
Translates to: ICCNHGCQYFSQDAVYRLQNCRQ*HIFVIN
Trigger: ATTAATGACAAAAATGTGTCACTGCCTACAGTTCTG...TAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGCAGCAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR TCA 90 bp GCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTCACTATCTCCTCACTTGTTCTATTCCGTaGAGTATGGCTCAGCTGTAT +
Preference number: 4 (lower is better)
Translates to: AASTFHKMLCIGYFHYLLTCSIP*SMAQLY
Trigger: ATACAGCTGAGCCATACTTCACGGAATAGAACAAGT...GAGGAGATAGTGAAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp GCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTCACTATCTCCTCCAGCGCTTGCTGTCATaGCAAGTAATAACTGTAGTA +
Preference number: 4 (lower is better)
Translates to: AASTFHKMLCIGYFHYLLQRLLS*QVITVV
Trigger: TACTACAGTTATTACTTGGCATGACAGCAAGCGCTG...GAGGAGATAGTGAAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp TTCTTCAGTGCTACACTCCAACTAAACTGTACAGTAAGTTCTGCAGAAATGGATTGCTGCAACCACGGCTaGCAGTACTTTTCACAAGAT +
Preference number: 4 (lower is better)
Translates to: FFSATLQLNCTVSSAEMDCCNHG*QYFSQD
Trigger: ATCTTGTGAAAAGTACTGGCAGCCGTGGTTGCAGCA...ATCCATTTCTGCAGAACTTACTGTACAGTTTAGTTGGAGTGTAGCACTGAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360768.5
ENST00000434382.2
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp GCAACCACGGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTCACCAAAAACATTACTGCTaGTTCTCAACCAGAGGATTA +
Preference number: 4 (lower is better)
Translates to: ATTAASTFHKMLCIGYFHQKHYC*FSTRGL
Trigger: TAATCCTCTGGTTGAGAAGCAGCAGTAATGTTTTTG...GTGAAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp AAAGTAAAGTTAAAGCTTGTCTTTGATTGGCTCGGCGTATCCTTTTTGTATCCATTTGGACTTGATACCTaGCTCGGGCCAGAAGACCTA +
Preference number: 4 (lower is better)
Translates to: KVKLKLVFDWLGVSFLYPFGLDT*LGPEDL
Trigger: TAGGTCTTCTGGCCCGAGGCAGGTATCAAGTCCAAA...TGGATACAAAAAGGATACGCCGAGCCAATCAAAGACAAGCTTTAACTTTACTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp AAAGTAAAGTTAAAGCTTGTCTTTGATTGGCTCGGCGTATCCTTTTTGTATCCAAAAGAACCAGAGGACTaGCTTGGTAGAGCTGGATGC +
Preference number: 4 (lower is better)
Translates to: KVKLKLVFDWLGVSFLYPKEPED*LGRAGC
Trigger: GCATCCAGCTCTACCAAGGCAGTCCTCTGGTTCTTT...TGGATACAAAAAGGATACGCCGAGCCAATCAAAGACAAGCTTTAACTTTACTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp GCCTTGGACTTGAAGGTCTGGCCACATGACTCATTCTGTAAGGTTAACAACTGGAGACATTTGCAAGAATaGAACATCAAGACAAGCTTT +
Preference number: 4 (lower is better)
Translates to: ALDLKVWPHDSFCKVNNWRHLQE*NIKTSF
Trigger: AAAGCTTGTCTTGATGTTGCATTCTTGCAAATGTCT...CCAGTTGTTAACCTTACAGAATGAGTCATGTGGCCAGACCTTCAAGTCCAAGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp GCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTCACTATCTCCTCACACTGGCATTACAATaGTGTTATGACAGGCAGTAC +
Preference number: 4 (lower is better)
Translates to: AASTFHKMLCIGYFHYLLTLALQ*CYDRQY
Trigger: GTACTGCCTGTCATAACAGCATTGTAATGCCAGTGT...GAGGAGATAGTGAAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp ACTCCAACTAAACTGTACAGTAAGTTCTGCAGAAATGGATCTAATATTTCTACCTTGGCCAGGCTGGAGTaGAGTGGCATGATCTTGACT +
Preference number: 4 (lower is better)
Translates to: TPTKLYSKFCRNGSNISTLARLE*SGMILT
Trigger: AGTCAAGATCATGCCACTGCACTCCAGCCTGGCCAA...GGTAGAAATATTAGATCCATTTCTGCAGAACTTACTGTACAGTTTAGTTGGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp TTCTTCAGTGCTACACTCCAACTAAACTGTACAGTAAGTTCTGCAGAAATGGATCAGGTGCCGCCACCATaGCCAGCTAATTTTTGTATT +
Preference number: 4 (lower is better)
Translates to: FFSATLQLNCTVSSAEMDQVPPP*PANFCI
Trigger: AATACAAAAATTAGCTGGGCATGGTGGCGGCACCTG...ATCCATTTCTGCAGAACTTACTGTACAGTTTAGTTGGAGTGTAGCACTGAAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp TTTTTGCCCTATTATTTGCTGCAACCACGGCTGCCAGTACTTTTCACAAGATGCATTAGAAACCATAAGTaGTGCCTGAGGTGTCTGAAA +
Preference number: 4 (lower is better)
Translates to: FLPYYLLQPRLPVLFTRCIRNHK*CLRCLK
Trigger: TTTCAGACACCTCAGGCAGCACTTATGGTTTCTAAT...GCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGCAGCAAATAATAGGGCAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp TTTTTGCCCTATTATTTGCTGCAACCACGGCTGCCAGTACTTTTCACAAGATGCATTAAAGGGGAAACCTaGCCAGTGAACTCCATTTTA +
Preference number: 4 (lower is better)
Translates to: FLPYYLLQPRLPVLFTRCIKGET*PVNSIL
Trigger: TAAAATGGAGTTCACTGGGCAGGTTTCCCCTTTAAT...GCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGCAGCAAATAATAGGGCAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CCA 90 bp GGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTCACTATCTCCTAAGCTTGTCTTTGATTaGCTCGGCGTATCCTTTTTG +
Preference number: 4 (lower is better)
Translates to: GCQYFSQDAVYRLFSLSPKLVFD*LGVSFL
Trigger: CAAAAAGGATACGCCGAGCCAATCAAAGACAAGCTT...AGGAGATAGTGAAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000360768.5
ENST00000434382.2
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CCA 90 bp ATTTGCTGCAACCACGGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATGTAAGGTTAACAACTaGCCCAGTTTTATGACTGAA +
Preference number: 4 (lower is better)
Translates to: ICCNHGCQYFSQDAVYRLCKVNN*PSFMTE
Trigger: TTCAGTCATAAAACTGGGCCAGTTGTTAACCTTACA...TAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGCAGCAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360768.5
ENST00000434382.2
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CCA 90 bp GCTGCAACCACGGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTAAAACCATTGGATATTaGGACACGAGGAACTTGTTT +
Preference number: 4 (lower is better)
Translates to: AATTAASTFHKMLCIGYFKTIGY*DTRNLF
Trigger: AAACAAGTTCCTCGTGTCCCAATATCCAATGGTTTT...AAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CCA 90 bp CTGGGCAGCATGTCAGCCCTGAAGGTTACAAATCCAGTATTTGACTGCAAAACATGGGCCATAGGAATGTaGCAAAAGTTTTTATACAAC +
Preference number: 4 (lower is better)
Translates to: LGSMSALKVTNPVFDCKTWAIGM*QKFLYN
Trigger: GTTGTATAAAAACTTTTGCCACATTCCTATGGCCCA...TGTTTTGCAGTCAAATACTGGATTTGTAACCTTCAGGGCTGACATGCTGCCCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CCA 90 bp GCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTCACTATCTCCTCCTATTCCGTGAAGTATaGCTCAGCTGTATTTCCAAC +
Preference number: 4 (lower is better)
Translates to: AASTFHKMLCIGYFHYLLLFREV*LSCISN
Trigger: GTTGGAAATACAGCTGAGCCATACTTCACGGAATAG...GAGGAGATAGTGAAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR TCA 90 bp ACTCCAACTAAACTGTACAGTAAGTTCTGCAGAAATGGATCTAATATTTCTACCCTGGAAGGGTCTGGCTaGCCATTTTGCCATGTTTTC +
Preference number: 4 (lower is better)
Translates to: TPTKLYSKFCRNGSNISTLEGSG*PFCHVF
Trigger: GAAAACATGGCAAAATGGTCAGCCAGACCCTTCCAG...GGTAGAAATATTAGATCCATTTCTGCAGAACTTACTGTACAGTTTAGTTGGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp TTCTTCAGTGCTACACTCCAACTAAACTGTACAGTAAGTTCTGCAGAAATGGATGATGTGTCTACCTGTTaGTATTCTCCCGATGAAGCA +
Preference number: 4 (lower is better)
Translates to: FFSATLQLNCTVSSAEMDDVSTC*YSPDEA
Trigger: TGCTTCATCGGGAGAATAGCAACAGGTAGACACATC...ATCCATTTCTGCAGAACTTACTGTACAGTTTAGTTGGAGTGTAGCACTGAAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp ATTTGCTGCAACCACGGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTACAAAAGTCTTCTTACTaGATGTGTGTCATTATGAGA +
Preference number: 4 (lower is better)
Translates to: ICCNHGCQYFSQDAVYRLQKSSY*MCVIMR
Trigger: TCTCATAATGACACACATGCAGTAAGAAGACTTTTG...TAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGCAGCAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp TTCTTCAGTGCTACACTCCAACTAAACTGTACAGTAAGTTCTGCAGAAATGGATGAAGGACACTTCTTCTaGCCAAGGTCAACACACAAA +
Preference number: 4 (lower is better)
Translates to: FFSATLQLNCTVSSAEMDEGHFF*PRSTHK
Trigger: TTTGTGTGTTGACCTTGGGCAGAAGAAGTGTCCTTC...ATCCATTTCTGCAGAACTTACTGTACAGTTTAGTTGGAGTGTAGCACTGAAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp CTGGGCACACAGCTAGTTAAACCTGAGTTATTTCACCGGAAATTTACCTTTAGTCCAGAAGACCTACGTTaGATCAATTCTGAGTCAGTT +
Preference number: 4 (lower is better)
Translates to: LGTQLVKPELFHRKFTFSPEDLR*INSESV
Trigger: AACTGACTCAGAATTGATGCAACGTAGGTCTTCTGG...ACTAAAGGTAAATTTCCGGTGAAATAACTCAGGTTTAACTAGCTGTGTGCCCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp GCTGCAACCACGGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTAGAGTTGAAGACATTTaGAAGAATGCAACATCAAGA +
Preference number: 4 (lower is better)
Translates to: AATTAASTFHKMLCIGYFRVEDI*KNATSR
Trigger: TCTTGATGTTGCATTCTTGCAAATGTCTTCAACTCT...AAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGCAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp GGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTCACTATCTCCTATTAAAGGGGAAACCTaGCCAGTGAACTCCATTTTA +
Preference number: 4 (lower is better)
Translates to: GCQYFSQDAVYRLFSLSPIKGET*PVNSIL
Trigger: TAAAATGGAGTTCACTGGGCAGGTTTCCCCTTTAAT...AGGAGATAGTGAAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp ATTTGCTGCAACCACGGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTACAGTTAGCAAAACAGTaGCTTAAATCTCTGATAAAG +
Preference number: 4 (lower is better)
Translates to: ICCNHGCQYFSQDAVYRLQLAKQ*LKSLIK
Trigger: CTTTATCAGAGATTTAAGGCACTGTTTTGCTAACTG...TAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGCAGCAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp TTCTTCAGTGCTACACTCCAACTAAACTGTACAGTAAGTTCTGCAGAAATGGATTTCAAGCAATTCTCCTaGCTCAGCTTCCTGAATAGC +
Preference number: 4 (lower is better)
Translates to: FFSATLQLNCTVSSAEMDFKQFS*LSFLNS
Trigger: GCTATTCAGGAAGCTGAGGCAGGAGAATTGCTTGAA...ATCCATTTCTGCAGAACTTACTGTACAGTTTAGTTGGAGTGTAGCACTGAAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CCA 90 bp TTCTTCAGTGCTACACTCCAACTAAACTGTACAGTAAGTTCTGCAGAAATGGATTTGGACTTGAAGGTCTaGCCACATGACTCATTCTGT +
Preference number: 4 (lower is better)
Translates to: FFSATLQLNCTVSSAEMDLDLKV*PHDSFC
Trigger: ACAGAATGAGTCATGTGGCCAGACCTTCAAGTCCAA...ATCCATTTCTGCAGAACTTACTGTACAGTTTAGTTGGAGTGTAGCACTGAAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360768.5
ENST00000434382.2
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CCA 90 bp TTCTTCAGTGCTACACTCCAACTAAACTGTACAGTAAGTTCTGCAGAAATGGATAAGCAAAGGAAAAACTaGAAGGGTCTGGCTGACCAT +
Preference number: 4 (lower is better)
Translates to: FFSATLQLNCTVSSAEMDKQRKN*KGLADH
Trigger: ATGGTCAGCCAGACCCTTCCAGTTTTTCCTTTGCTT...ATCCATTTCTGCAGAACTTACTGTACAGTTTAGTTGGAGTGTAGCACTGAAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CCA 90 bp GCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTCACTATCTCCTCTCGTTTCAGTTCTTTTaGAATGCAACCCTGCAGTTT +
Preference number: 4 (lower is better)
Translates to: AASTFHKMLCIGYFHYLLSFQFF*NATLQF
Trigger: AAACTGCAGGGTTGCATTCCAAAAGAACTGAAACGA...GAGGAGATAGTGAAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CCA 90 bp CTGGGCACACAGCTAGTTAAACCTGAGTTATTTCACCGGAAATTTACCTTTAGTCTATTCCGTGAAGTATaGCTCAGCTGTATTTCCAAC +
Preference number: 4 (lower is better)
Translates to: LGTQLVKPELFHRKFTFSLFREV*LSCISN
Trigger: GTTGGAAATACAGCTGAGCCATACTTCACGGAATAG...ACTAAAGGTAAATTTCCGGTGAAATAACTCAGGTTTAACTAGCTGTGTGCCCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR TCA 90 bp TTCTTCAGTGCTACACTCCAACTAAACTGTACAGTAAGTTCTGCAGAAATGGATTGCTGCAAAATAAACTaGATGGAAAGGGGCTTGAGA +
Preference number: 4 (lower is better)
Translates to: FFSATLQLNCTVSSAEMDCCKIN*MERGLR
Trigger: TCTCAAGCCCCTTTCCATTCAGTTTATTTTGCAGCA...ATCCATTTCTGCAGAACTTACTGTACAGTTTAGTTGGAGTGTAGCACTGAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360768.5
ENST00000434382.2
ENST00000648179.1
ENST00000648187.1
CDS-3UTR TCA 90 bp ACTCCAACTAAACTGTACAGTAAGTTCTGCAGAAATGGATCTAATATTTCTACCAACCAGAGGATTAAGTaGTCACACAGGACCCTTCTG +
Preference number: 4 (lower is better)
Translates to: TPTKLYSKFCRNGSNISTNQRIK*SHRTLL
Trigger: CAGAAGGGTCCTGTGTGATCACTTAATCCTCTGGTT...GGTAGAAATATTAGATCCATTTCTGCAGAACTTACTGTACAGTTTAGTTGGAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR TCA 90 bp ACTCCAACTAAACTGTACAGTAAGTTCTGCAGAAATGGATCTAATATTTCTACCATTATGATTTGGACTTaGTACCTGCCTCGGGCCAGA +
Preference number: 4 (lower is better)
Translates to: TPTKLYSKFCRNGSNISTIMIWT*YLPRAR
Trigger: TCTGGCCCGAGGCAGGTATCAAGTCCAAATCATAAT...GGTAGAAATATTAGATCCATTTCTGCAGAACTTACTGTACAGTTTAGTTGGAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR TCA 90 bp GCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTCACTATCTCCTCGTGAAAAGTTCATTATaGTTTGGACTTGATACCTGC +
Preference number: 4 (lower is better)
Translates to: AASTFHKMLCIGYFHYLLVKSSL*FGLDTC
Trigger: GCAGGTATCAAGTCCAAATCATAATGAACTTTTCAC...GAGGAGATAGTGAAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR TCA 90 bp AAAGTAAAGTTAAAGCTTGTCTTTGATTGGCTCGGCGTATCCTTTTTGTATCCACCAGGATTCTGTTACTaGGACACTGGCATTACAATG +
Preference number: 4 (lower is better)
Translates to: KVKLKLVFDWLGVSFLYPPGFCY*DTGITM
Trigger: CATTGTAATGCCAGTGTCTCAGTAACAGAATCCTGG...TGGATACAAAAAGGATACGCCGAGCCAATCAAAGACAAGCTTTAACTTTACTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR TCA 90 bp ACTCCAACTAAACTGTACAGTAAGTTCTGCAGAAATGGATCTAATATTTCTACCGAGAGGACACATGTATaGAGGAACAGTGATTCTGGG +
Preference number: 4 (lower is better)
Translates to: TPTKLYSKFCRNGSNISTERTHV*RNSDSG
Trigger: CCCAGAATCACTGTTCCTTCATACATGTGTCCTCTC...GGTAGAAATATTAGATCCATTTCTGCAGAACTTACTGTACAGTTTAGTTGGAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR TCA 90 bp TTCTTCAGTGCTACACTCCAACTAAACTGTACAGTAAGTTCTGCAGAAATGGATACTTGTTCTATTCCGTaGAGTATGGCTCAGCTGTAT +
Preference number: 4 (lower is better)
Translates to: FFSATLQLNCTVSSAEMDTCSIP*SMAQLY
Trigger: ATACAGCTGAGCCATACTTCACGGAATAGAACAAGT...ATCCATTTCTGCAGAACTTACTGTACAGTTTAGTTGGAGTGTAGCACTGAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp TTCTTCAGTGCTACACTCCAACTAAACTGTACAGTAAGTTCTGCAGAAATGGATCTGACAGTTCTTCAGTaGTACACTCCAACTAAACTG +
Preference number: 4 (lower is better)
Translates to: FFSATLQLNCTVSSAEMDLTVLQ*YTPTKL
Trigger: CAGTTTAGTTGGAGTGTAGCACTGAAGAACTGTCAG...ATCCATTTCTGCAGAACTTACTGTACAGTTTAGTTGGAGTGTAGCACTGAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360768.5
ENST00000434382.2
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp TTTTTGCCCTATTATTTGCTGCAACCACGGCTGCCAGTACTTTTCACAAGATGCCAAAAGTCTTCTTACTaGATGTGTGTCATTATGAGA +
Preference number: 4 (lower is better)
Translates to: FLPYYLLQPRLPVLFTRCQKSSY*MCVIMR
Trigger: TCTCATAATGACACACATGCAGTAAGAAGACTTTTG...GCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGCAGCAAATAATAGGGCAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp GGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTCACTATCTCCTCAAAAACATTACTGCTaGTTCTCAACCAGAGGATTA +
Preference number: 4 (lower is better)
Translates to: GCQYFSQDAVYRLFSLSPQKHYC*FSTRGL
Trigger: TAATCCTCTGGTTGAGAAGCAGCAGTAATGTTTTTG...AGGAGATAGTGAAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp ACTTTTCACAAGATGCTGTGTATAGGCTATTTTCACTATCTCCTCAGTCAACGCAAGCAAAAACATTACTaGTGCTTCTCAACCAGAGGA +
Preference number: 4 (lower is better)
Translates to: TFHKMLCIGYFHYLLSQRKQKHY*CFSTRG
Trigger: TCCTCTGGTTGAGAAGCAGCAGTAATGTTTTTGCTT...GCGTTGACTGAGGAGATAGTGAAAATAGCCTATACACAGCATCTTGTGAAAAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp TTTTTGCCCTATTATTTGCTGCAACCACGGCTGCCAGTACTTTTCACAAGATGCAGACATTTGCAAGAATaGAACATCAAGACAAGCTTT +
Preference number: 4 (lower is better)
Translates to: FLPYYLLQPRLPVLFTRCRHLQE*NIKTSF
Trigger: AAAGCTTGTCTTGATGTTGCATTCTTGCAAATGTCT...GCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGCAGCAAATAATAGGGCAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp GGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTCACTATCTCCTTTTGGAATGCAACCCTaGAGTTTAAGAATAATGGGA +
Preference number: 4 (lower is better)
Translates to: GCQYFSQDAVYRLFSLSPFGMQP*SLRIMG
Trigger: TCCCATTATTCTTAAACTGCAGGGTTGCATTCCAAA...AGGAGATAGTGAAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp CTGGGCACACAGCTAGTTAAACCTGAGTTATTTCACCGGAAATTTACCTTTAGTCGGATTCATCTTTCTTaGCGATGCTACCTTTTTAGA +
Preference number: 4 (lower is better)
Translates to: LGTQLVKPELFHRKFTFSRIHLS*RCYLFR
Trigger: TCTAAAAAGGTAGCATCGGCAAGAAAGATGAATCCG...ACTAAAGGTAAATTTCCGGTGAAATAACTCAGGTTTAACTAGCTGTGTGCCCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CCA 90 bp GGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTCACTATCTCCTTGTAAGGTTAACAACTaGCCCAGTTTTATGACTGAA +
Preference number: 4 (lower is better)
Translates to: GCQYFSQDAVYRLFSLSPCKVNN*PSFMTE
Trigger: TTCAGTCATAAAACTGGGCCAGTTGTTAACCTTACA...AGGAGATAGTGAAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360768.5
ENST00000434382.2
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CCA 90 bp AAAGTAAAGTTAAAGCTTGTCTTTGATTGGCTCGGCGTATCCTTTTTGTATCCATTGGACTTGAAGGTCTaGCCACATGACTCATTCTGT +
Preference number: 4 (lower is better)
Translates to: KVKLKLVFDWLGVSFLYPLDLKV*PHDSFC
Trigger: ACAGAATGAGTCATGTGGCCAGACCTTCAAGTCCAA...TGGATACAAAAAGGATACGCCGAGCCAATCAAAGACAAGCTTTAACTTTACTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360768.5
ENST00000434382.2
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CCA 90 bp GCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTCACTATCTCCTCAAAACCATTGGATATTaGGACACGAGGAACTTGTTT +
Preference number: 4 (lower is better)
Translates to: AASTFHKMLCIGYFHYLLKTIGY*DTRNLF
Trigger: AAACAAGTTCCTCGTGTCCCAATATCCAATGGTTTT...GAGGAGATAGTGAAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CCA 90 bp AAAGTAAAGTTAAAGCTTGTCTTTGATTGGCTCGGCGTATCCTTTTTGTATCCAAAGCAAAGGAAAAACTaGAAGGGTCTGGCTGACCAT +
Preference number: 4 (lower is better)
Translates to: KVKLKLVFDWLGVSFLYPKQRKN*KGLADH
Trigger: ATGGTCAGCCAGACCCTTCCAGTTTTTCCTTTGCTT...TGGATACAAAAAGGATACGCCGAGCCAATCAAAGACAAGCTTTAACTTTACTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CCA 90 bp TTCTTCAGTGCTACACTCCAACTAAACTGTACAGTAAGTTCTGCAGAAATGGATATACAACTGAAACAGTaGTTTCCCCGAGGCTTAGAA +
Preference number: 4 (lower is better)
Translates to: FFSATLQLNCTVSSAEMDIQLKQ*FPRGLE
Trigger: TTCTAAGCCTCGGGGAAACCACTGTTTCAGTTGTAT...ATCCATTTCTGCAGAACTTACTGTACAGTTTAGTTGGAGTGTAGCACTGAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
3UTR CAA 72 bp GCTTGGACTGGTCTTTTCCATCATAATACTCTTTGCTaGACTGGCACCAACGTTAAGGAAAAATATCTGCAT +
Preference number: 4 (lower is better)
Translates to: AWTGLFHHNTLC*TGTNVKEKYLH
Trigger: ATGCAGATATTTTTCCTTAACGTTGGTGCCAGTCAAGCAAAGAGTATTATGATGGAAAAGACCAGTCCAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360768.5
ENST00000434382.2
ENST00000648179.1
ENST00000648187.1
CDS-3UTR TCA 90 bp AAAGTAAAGTTAAAGCTTGTCTTTGATTGGCTCGGCGTATCCTTTTTGTATCCAATAATACTCTTTGCTTaGCTGGCACCAACGTTAAGG +
Preference number: 4 (lower is better)
Translates to: KVKLKLVFDWLGVSFLYPIILFA*LAPTLR
Trigger: CCTTAACGTTGGTGCCAGTCAAGCAAAGAGTATTAT...TGGATACAAAAAGGATACGCCGAGCCAATCAAAGACAAGCTTTAACTTTACTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360768.5
ENST00000434382.2
ENST00000648179.1
ENST00000648187.1
CDS-3UTR TCA 90 bp ACTTTTCACAAGATGCTGTGTATAGGCTATTTTCACTATCTCCTCAGTCAACGCGAACTCCATTTTAAATaGCTGTTTACTCTGGAGCTT +
Preference number: 4 (lower is better)
Translates to: TFHKMLCIGYFHYLLSQRELHFK*LFTLEL
Trigger: AAGCTCCAGAGTAAACAGTCATTTAAAATGGAGTTC...GCGTTGACTGAGGAGATAGTGAAAATAGCCTATACACAGCATCTTGTGAAAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp AAAGTAAAGTTAAAGCTTGTCTTTGATTGGCTCGGCGTATCCTTTTTGTATCCACCAGAAGACCTACGTTaGATCAATTCTGAGTCAGTT +
Preference number: 4 (lower is better)
Translates to: KVKLKLVFDWLGVSFLYPPEDLR*INSESV
Trigger: AACTGACTCAGAATTGATGCAACGTAGGTCTTCTGG...TGGATACAAAAAGGATACGCCGAGCCAATCAAAGACAAGCTTTAACTTTACTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp GCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTCACTATCTCCTCAGAGTTGAAGACATTTaGAAGAATGCAACATCAAGA +
Preference number: 4 (lower is better)
Translates to: AASTFHKMLCIGYFHYLLRVEDI*KNATSR
Trigger: TCTTGATGTTGCATTCTTGCAAATGTCTTCAACTCT...GAGGAGATAGTGAAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp TTCTTCAGTGCTACACTCCAACTAAACTGTACAGTAAGTTCTGCAGAAATGGATATTAAAGGGGAAACCTaGCCAGTGAACTCCATTTTA +
Preference number: 4 (lower is better)
Translates to: FFSATLQLNCTVSSAEMDIKGET*PVNSIL
Trigger: TAAAATGGAGTTCACTGGGCAGGTTTCCCCTTTAAT...ATCCATTTCTGCAGAACTTACTGTACAGTTTAGTTGGAGTGTAGCACTGAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp CTGGGCACACAGCTAGTTAAACCTGAGTTATTTCACCGGAAATTTACCTTTAGTCATCTTTCTTGCCGATaGTACCTTTTTAGAGGATTA +
Preference number: 4 (lower is better)
Translates to: LGTQLVKPELFHRKFTFSHLSCR*YLFRGL
Trigger: TAATCCTCTAAAAAGGTAGCATCGGCAAGAAAGATG...ACTAAAGGTAAATTTCCGGTGAAATAACTCAGGTTTAACTAGCTGTGTGCCCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CCA 90 bp CTGGGCACACAGCTAGTTAAACCTGAGTTATTTCACCGGAAATTTACCTTTAGTAAAACCATTGGATATTaGGACACGAGGAACTTGTTT +
Preference number: 4 (lower is better)
Translates to: LGTQLVKPELFHRKFTFSKTIGY*DTRNLF
Trigger: AAACAAGTTCCTCGTGTCCCAATATCCAATGGTTTT...ACTAAAGGTAAATTTCCGGTGAAATAACTCAGGTTTAACTAGCTGTGTGCCCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR TCA 90 bp ACTCCAACTAAACTGTACAGTAAGTTCTGCAGAAATGGATCTAATATTTCTACCGCCCAGTTTTATGACTaGACACAAACTGGACTTGAA +
Preference number: 4 (lower is better)
Translates to: TPTKLYSKFCRNGSNISTAQFYD*TQTGLE
Trigger: TTCAAGTCCAGTTTGTGTTCAGTCATAAAACTGGGC...GGTAGAAATATTAGATCCATTTCTGCAGAACTTACTGTACAGTTTAGTTGGAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360768.5
ENST00000434382.2
ENST00000648179.1
ENST00000648187.1
CDS-3UTR TCA 90 bp AAAGTAAAGTTAAAGCTTGTCTTTGATTGGCTCGGCGTATCCTTTTTGTATCCACTACGGAATTGTTGCTaGCTCTACACATTTGAGTTT +
Preference number: 4 (lower is better)
Translates to: KVKLKLVFDWLGVSFLYPLRNCC*LYTFEF
Trigger: AAACTCAAATGTGTAGAGTCAGCAACAATTCCGTAG...TGGATACAAAAAGGATACGCCGAGCCAATCAAAGACAAGCTTTAACTTTACTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp ACTCCAACTAAACTGTACAGTAAGTTCTGCAGAAATGGATCTAATATTTCTACCCAGCGCTTGCTGTCATaGCAAGTAATAACTGTAGTA +
Preference number: 4 (lower is better)
Translates to: TPTKLYSKFCRNGSNISTQRLLS*QVITVV
Trigger: TACTACAGTTATTACTTGGCATGACAGCAAGCGCTG...GGTAGAAATATTAGATCCATTTCTGCAGAACTTACTGTACAGTTTAGTTGGAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp AAAGTAAAGTTAAAGCTTGTCTTTGATTGGCTCGGCGTATCCTTTTTGTATCCACATCATAATACTCTTTaGTTGACTGGCACCAACGTT +
Preference number: 4 (lower is better)
Translates to: KVKLKLVFDWLGVSFLYPHHNTL*LTGTNV
Trigger: AACGTTGGTGCCAGTCAAGCAAAGAGTATTATGATG...TGGATACAAAAAGGATACGCCGAGCCAATCAAAGACAAGCTTTAACTTTACTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360768.5
ENST00000434382.2
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp CTGGGCACACAGCTAGTTAAACCTGAGTTATTTCACCGGAAATTTACCTTTAGTAGAGTTGAAGACATTTaGAAGAATGCAACATCAAGA +
Preference number: 4 (lower is better)
Translates to: LGTQLVKPELFHRKFTFSRVEDI*KNATSR
Trigger: TCTTGATGTTGCATTCTTGCAAATGTCTTCAACTCT...ACTAAAGGTAAATTTCCGGTGAAATAACTCAGGTTTAACTAGCTGTGTGCCCAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp ACTCCAACTAAACTGTACAGTAAGTTCTGCAGAAATGGATCTAATATTTCTACCACACTGGCATTACAATaGTGTTATGACAGGCAGTAC +
Preference number: 4 (lower is better)
Translates to: TPTKLYSKFCRNGSNISTTLALQ*CYDRQY
Trigger: GTACTGCCTGTCATAACAGCATTGTAATGCCAGTGT...GGTAGAAATATTAGATCCATTTCTGCAGAACTTACTGTACAGTTTAGTTGGAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp AAAGTAAAGTTAAAGCTTGTCTTTGATTGGCTCGGCGTATCCTTTTTGTATCCACGGATTCATCTTTCTTaGCGATGCTACCTTTTTAGA +
Preference number: 4 (lower is better)
Translates to: KVKLKLVFDWLGVSFLYPRIHLS*RCYLFR
Trigger: TCTAAAAAGGTAGCATCGGCAAGAAAGATGAATCCG...TGGATACAAAAAGGATACGCCGAGCCAATCAAAGACAAGCTTTAACTTTACTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CCA 90 bp TTCTTCAGTGCTACACTCCAACTAAACTGTACAGTAAGTTCTGCAGAAATGGATTGGGCCATAGGAATGTaGCAAAAGTTTTTATACAAC +
Preference number: 4 (lower is better)
Translates to: FFSATLQLNCTVSSAEMDWAIGM*QKFLYN
Trigger: GTTGTATAAAAACTTTTGCCACATTCCTATGGCCCA...ATCCATTTCTGCAGAACTTACTGTACAGTTTAGTTGGAGTGTAGCACTGAAGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CCA 90 bp AAAGTAAAGTTAAAGCTTGTCTTTGATTGGCTCGGCGTATCCTTTTTGTATCCAAGTGGGTCTCCTTGTTaGCATCTAATAATGATCTTC +
Preference number: 4 (lower is better)
Translates to: KVKLKLVFDWLGVSFLYPSGSPC*HLIMIF
Trigger: GAAGATCATTATTAGATGCCAACAAGGAGACCCACT...TGGATACAAAAAGGATACGCCGAGCCAATCAAAGACAAGCTTTAACTTTACTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CCA 90 bp ACTCCAACTAAACTGTACAGTAAGTTCTGCAGAAATGGATCTAATATTTCTACCCTATTCCGTGAAGTATaGCTCAGCTGTATTTCCAAC +
Preference number: 4 (lower is better)
Translates to: TPTKLYSKFCRNGSNISTLFREV*LSCISN
Trigger: GTTGGAAATACAGCTGAGCCATACTTCACGGAATAG...GGTAGAAATATTAGATCCATTTCTGCAGAACTTACTGTACAGTTTAGTTGGAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp TTCTTCAGTGCTACACTCCAACTAAACTGTACAGTAAGTTCTGCAGAAATGGATCAAAAGTCTTCTTACTaGATGTGTGTCATTATGAGA +
Preference number: 4 (lower is better)
Translates to: FFSATLQLNCTVSSAEMDQKSSY*MCVIMR
Trigger: TCTCATAATGACACACATGCAGTAAGAAGACTTTTG...ATCCATTTCTGCAGAACTTACTGTACAGTTTAGTTGGAGTGTAGCACTGAAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp TTCTTCAGTGCTACACTCCAACTAAACTGTACAGTAAGTTCTGCAGAAATGGATAGACATTTGCAAGAATaGAACATCAAGACAAGCTTT +
Preference number: 4 (lower is better)
Translates to: FFSATLQLNCTVSSAEMDRHLQE*NIKTSF
Trigger: AAAGCTTGTCTTGATGTTGCATTCTTGCAAATGTCT...ATCCATTTCTGCAGAACTTACTGTACAGTTTAGTTGGAGTGTAGCACTGAAGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp AAAGTAAAGTTAAAGCTTGTCTTTGATTGGCTCGGCGTATCCTTTTTGTATCCACATCTTTCTTGCCGATaGTACCTTTTTAGAGGATTA +
Preference number: 4 (lower is better)
Translates to: KVKLKLVFDWLGVSFLYPHLSCR*YLFRGL
Trigger: TAATCCTCTAAAAAGGTAGCATCGGCAAGAAAGATG...TGGATACAAAAAGGATACGCCGAGCCAATCAAAGACAAGCTTTAACTTTACTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CCA 90 bp ACTCCAACTAAACTGTACAGTAAGTTCTGCAGAAATGGATCTAATATTTCTACCCTGTTACTGAGACACTaGCATTACAATGCTGTTATG +
Preference number: 4 (lower is better)
Translates to: TPTKLYSKFCRNGSNISTLLLRH*HYNAVM
Trigger: CATAACAGCATTGTAATGCCAGTGTCTCAGTAACAG...GGTAGAAATATTAGATCCATTTCTGCAGAACTTACTGTACAGTTTAGTTGGAGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR TCA 90 bp ACTCCAACTAAACTGTACAGTAAGTTCTGCAGAAATGGATCTAATATTTCTACCCAGAACTGTAGGCAGTaGCACATTTTTGTCATTAAT +
Preference number: 4 (lower is better)
Translates to: TPTKLYSKFCRNGSNISTQNCRQ*HIFVIN
Trigger: ATTAATGACAAAAATGTGTCACTGCCTACAGTTCTG...GGTAGAAATATTAGATCCATTTCTGCAGAACTTACTGTACAGTTTAGTTGGAGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp AAAGTAAAGTTAAAGCTTGTCTTTGATTGGCTCGGCGTATCCTTTTTGTATCCACAGTTAGCAAAACAGTaGCTTAAATCTCTGATAAAG +
Preference number: 4 (lower is better)
Translates to: KVKLKLVFDWLGVSFLYPQLAKQ*LKSLIK
Trigger: CTTTATCAGAGATTTAAGGCACTGTTTTGCTAACTG...TGGATACAAAAAGGATACGCCGAGCCAATCAAAGACAAGCTTTAACTTTACTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR GCA 90 bp ACTCCAACTAAACTGTACAGTAAGTTCTGCAGAAATGGATCTAATATTTCTACCCATCTTTCTTGCCGATaGTACCTTTTTAGAGGATTA +
Preference number: 4 (lower is better)
Translates to: TPTKLYSKFCRNGSNISTHLSCR*YLFRGL
Trigger: TAATCCTCTAAAAAGGTAGCATCGGCAAGAAAGATG...GGTAGAAATATTAGATCCATTTCTGCAGAACTTACTGTACAGTTTAGTTGGAGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
3UTR CAA 72 bp GATGTTAACCATACAAACATCCTGTCACAATTTCATTaGGGTGTACTCAAATCCCCTTACAAAAGTCTTCTT +
Preference number: 4 (lower is better)
Translates to: DVNHTNILSQFH*GVLKSPYKSLL
Trigger: AAGAAGACTTTTGTAAGGGGATTTGAGTACACCCAAATGAAATTGTGACAGGATGTTTGTATGGTTAACATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CAA 90 bp GCAAGAACACTGGCTCCCACTCCGGAGCGATGGGGCTTGGACTGGTCTTTTCCATACAGGCATGAGCCATaGCACCCAGTGGGGGCAGTC +
Preference number: 5 (lower is better)
Translates to: ARTLAPTPERWGLDWSFPYRHEP*HPVGAV
Trigger: GACTGCCCCCACTGGGTGCAATGGCTCATGCCTGTA...TGGAAAAGACCAGTCCAAGCCCCATCGCTCCGGAGTGGGAGCCAGTGTTCTTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CAA 90 bp ATTAGCAAGAACACTGGCTCCCACTCCGGAGCGATGGGGCTTGGACTGGTCTTTTCAGTCCTGCTTGGGTaGCAGCTGCCGCTTCCAGGC +
Preference number: 5 (lower is better)
Translates to: ISKNTGSHSGAMGLGLVFSVLLG*QLPLPG
Trigger: GCCTGGAAGCGGCAGCTGCAACCCAAGCAGGACTGA...AAAGACCAGTCCAAGCCCCATCGCTCCGGAGTGGGAGCCAGTGTTCTTGCTAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360768.5
ENST00000434382.2
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CAA 90 bp ATTAGCAAGAACACTGGCTCCCACTCCGGAGCGATGGGGCTTGGACTGGTCTTTAAGCCGCCACAGCGCTaGCTGTCATGCCTGGAGGCA +
Preference number: 5 (lower is better)
Translates to: ISKNTGSHSGAMGLGLVFKPPQR*LSCLEA
Trigger: TGCCTCCAGGCATGACAGCAAGCGCTGTGGCGGCTT...AAAGACCAGTCCAAGCCCCATCGCTCCGGAGTGGGAGCCAGTGTTCTTGCTAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434382.2
CDS CCA 90 bp GGCTTGAGACTGTTAGGGTGGAGTCTGTCGGGCGTCAGTCCTGCTTaGGTTGCAGCTGCCGCTTCCAGGCCTCGTTCAAGTAAACTAGTC +
Preference number: 5 (lower is better)
Translates to: GLRLLGWSLSGVSPA*VAAAASRPRSSKLV
Trigger: GACTAGTTTACTTGAACGAGGCCTGGAAGCGGCAGCTGCAACCCAAGCAGGACTGACGCCCGACAGACTCCACCCTAACAGTCTCAAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360768.5
ENST00000434382.2
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CAA 90 bp ATTAGCAAGAACACTGGCTCCCACTCCGGAGCGATGGGGCTTGGACTGGTCTTTCTGAAGGCCTTGGACTaGAAGGTCTGGCCACATGAC +
Preference number: 5 (lower is better)
Translates to: ISKNTGSHSGAMGLGLVFLKALD*KVWPHD
Trigger: GTCATGTGGCCAGACCTTCAAGTCCAAGGCCTTCAG...AAAGACCAGTCCAAGCCCCATCGCTCCGGAGTGGGAGCCAGTGTTCTTGCTAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360768.5
ENST00000434382.2
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CAA 90 bp ATTAGCAAGAACACTGGCTCCCACTCCGGAGCGATGGGGCTTGGACTGGTCTTTCCCTTTCCACAGGTCTaGAGCTCCAGCACAGAACAC +
Preference number: 5 (lower is better)
Translates to: ISKNTGSHSGAMGLGLVFPFPQV*SSSTEH
Trigger: GTGTTCTGTGCTGGAGCTCAAGACCTGTGGAAAGGG...AAAGACCAGTCCAAGCCCCATCGCTCCGGAGTGGGAGCCAGTGTTCTTGCTAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CAA 90 bp ATTAGCAAGAACACTGGCTCCCACTCCGGAGCGATGGGGCTTGGACTGGTCTTTAAGCCGCCACAGCGCTaGCTGTCATGCCAAGTAATA +
Preference number: 5 (lower is better)
Translates to: ISKNTGSHSGAMGLGLVFKPPQR*LSCQVI
Trigger: TATTACTTGGCATGACAGCAAGCGCTGTGGCGGCTT...AAAGACCAGTCCAAGCCCCATCGCTCCGGAGTGGGAGCCAGTGTTCTTGCTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CAA 90 bp CTGGGCAGCATGTCAGCCCTGAAGGTTACAAATCCAGTATTTGACTGCAAAACAGGGCGTCAGTCCTGCTaGGGTTGCAGCTGCCGCTTC +
Preference number: 5 (lower is better)
Translates to: LGSMSALKVTNPVFDCKTGRQSC*GCSCRF
Trigger: GAAGCGGCAGCTGCAACCCAAGCAGGACTGACGCCC...TGTTTTGCAGTCAAATACTGGATTTGTAACCTTCAGGGCTGACATGCTGCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CAA 90 bp GCAACCACGGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTCACGGGCGTCAGTCCTGCTaGGGTTGCAGCTGCCGCTTC +
Preference number: 5 (lower is better)
Translates to: ATTAASTFHKMLCIGYFHGRQSC*GCSCRF
Trigger: GAAGCGGCAGCTGCAACCCAAGCAGGACTGACGCCC...GTGAAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360768.5
ENST00000434382.2
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CAA 90 bp GGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTCACTATCTCCTGGGCGTCAGTCCTGCTaGGGTTGCAGCTGCCGCTTC +
Preference number: 5 (lower is better)
Translates to: GCQYFSQDAVYRLFSLSPGRQSC*GCSCRF
Trigger: GAAGCGGCAGCTGCAACCCAAGCAGGACTGACGCCC...AGGAGATAGTGAAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360768.5
ENST00000434382.2
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CAA 90 bp GCAAGAACACTGGCTCCCACTCCGGAGCGATGGGGCTTGGACTGGTCTTTTCCATCACAGTGGGTCTCCTaGTTGGCATCTAATAATGAT +
Preference number: 5 (lower is better)
Translates to: ARTLAPTPERWGLDWSFPSQWVS*LASNND
Trigger: ATCATTATTAGATGCCAACAAGGAGACCCACTGTGA...TGGAAAAGACCAGTCCAAGCCCCATCGCTCCGGAGTGGGAGCCAGTGTTCTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CAA 90 bp CTGGGCACACAGCTAGTTAAACCTGAGTTATTTCACCGGAAATTTACCTTTAGTGGGCGTCAGTCCTGCTaGGGTTGCAGCTGCCGCTTC +
Preference number: 5 (lower is better)
Translates to: LGTQLVKPELFHRKFTFSGRQSC*GCSCRF
Trigger: GAAGCGGCAGCTGCAACCCAAGCAGGACTGACGCCC...ACTAAAGGTAAATTTCCGGTGAAATAACTCAGGTTTAACTAGCTGTGTGCCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CAA 90 bp GCTGCAACCACGGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTCCGGGGCTCCCACCCTaGCCCTTTTTGTTTGATGGA +
Preference number: 5 (lower is better)
Translates to: AATTAASTFHKMLCIGYFPGLPP*PFLFDG
Trigger: TCCATCAAACAAAAAGGGCAAGGGTGGGAGCCCCGG...AAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CAA 90 bp GCAACCACGGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTCACCCGGGGCTCCCACCCTaGCCCTTTTTGTTTGATGGA +
Preference number: 5 (lower is better)
Translates to: ATTAASTFHKMLCIGYFHPGLPP*PFLFDG
Trigger: TCCATCAAACAAAAAGGGCAAGGGTGGGAGCCCCGG...GTGAAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CAA 90 bp GCCTTGGACTTGAAGGTCTGGCCACATGACTCATTCTGTAAGGTTAACAACTGGCCCTTTCCACAGGTCTaGAGCTCCAGCACAGAACAC +
Preference number: 5 (lower is better)
Translates to: ALDLKVWPHDSFCKVNNWPFPQV*SSSTEH
Trigger: GTGTTCTGTGCTGGAGCTCAAGACCTGTGGAAAGGG...CCAGTTGTTAACCTTACAGAATGAGTCATGTGGCCAGACCTTCAAGTCCAAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CAA 90 bp TTTTTGCCCTATTATTTGCTGCAACCACGGCTGCCAGTACTTTTCACAAGATGCTACAGGCATGAGCCATaGCACCCAGTGGGGGCAGTC +
Preference number: 5 (lower is better)
Translates to: FLPYYLLQPRLPVLFTRCYRHEP*HPVGAV
Trigger: GACTGCCCCCACTGGGTGCAATGGCTCATGCCTGTA...GCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGCAGCAAATAATAGGGCAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CAA 90 bp GCTGCAACCACGGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTCTGAAGGCCTTGGACTaGAAGGTCTGGCCACATGAC +
Preference number: 5 (lower is better)
Translates to: AATTAASTFHKMLCIGYFLKALD*KVWPHD
Trigger: GTCATGTGGCCAGACCTTCAAGTCCAAGGCCTTCAG...AAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360768.5
ENST00000434382.2
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CAA 90 bp ATTTGCTGCAACCACGGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTACTGAAGGCCTTGGACTaGAAGGTCTGGCCACATGAC +
Preference number: 5 (lower is better)
Translates to: ICCNHGCQYFSQDAVYRLLKALD*KVWPHD
Trigger: GTCATGTGGCCAGACCTTCAAGTCCAAGGCCTTCAG...TAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGCAGCAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360768.5
ENST00000434382.2
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CAA 90 bp ATTAGCAAGAACACTGGCTCCCACTCCGGAGCGATGGGGCTTGGACTGGTCTTTCAGCACAGAACACACTaGTTCTATTCCGTGAAGTAT +
Preference number: 5 (lower is better)
Translates to: ISKNTGSHSGAMGLGLVFQHRTH*FYSVKY
Trigger: ATACTTCACGGAATAGAACAAGTGTGTTCTGTGCTG...AAAGACCAGTCCAAGCCCCATCGCTCCGGAGTGGGAGCCAGTGTTCTTGCTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CAA 90 bp ATTAGCAAGAACACTGGCTCCCACTCCGGAGCGATGGGGCTTGGACTGGTCTTTAAAGTTCATTATGATTaGGACTTGATACCTGCCTCG +
Preference number: 5 (lower is better)
Translates to: ISKNTGSHSGAMGLGLVFKVHYD*DLIPAS
Trigger: CGAGGCAGGTATCAAGTCCAAATCATAATGAACTTT...AAAGACCAGTCCAAGCCCCATCGCTCCGGAGTGGGAGCCAGTGTTCTTGCTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CAA 90 bp GCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTCACTATCTCCTCAACCAGAGGACTGCCTaGGTAGAGCTGGATGCGCTG +
Preference number: 5 (lower is better)
Translates to: AASTFHKMLCIGYFHYLLNQRTA*VELDAL
Trigger: CAGCGCATCCAGCTCTACCAAGGCAGTCCTCTGGTT...GAGGAGATAGTGAAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CAA 90 bp TTTTTGCCCTATTATTTGCTGCAACCACGGCTGCCAGTACTTTTCACAAGATGCAAGCCGCCACAGCGCTaGCTGTCATGCCAAGTAATA +
Preference number: 5 (lower is better)
Translates to: FLPYYLLQPRLPVLFTRCKPPQR*LSCQVI
Trigger: TATTACTTGGCATGACAGCAAGCGCTGTGGCGGCTT...GCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGCAGCAAATAATAGGGCAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CAA 90 bp AAAGTAAAGTTAAAGCTTGTCTTTGATTGGCTCGGCGTATCCTTTTTGTATCCATCAGTCCTGCTTGGGTaGCAGCTGCCGCTTCCAGGC +
Preference number: 5 (lower is better)
Translates to: KVKLKLVFDWLGVSFLYPSVLLG*QLPLPG
Trigger: GCCTGGAAGCGGCAGCTGCAACCCAAGCAGGACTGA...TGGATACAAAAAGGATACGCCGAGCCAATCAAAGACAAGCTTTAACTTTACTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360768.5
ENST00000434382.2
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CAA 90 bp GCTGCAACCACGGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTCATTATGATTTGGACTaGATACCTGCCTCGGGCCAG +
Preference number: 5 (lower is better)
Translates to: AATTAASTFHKMLCIGYFHYDLD*IPASGQ
Trigger: CTGGCCCGAGGCAGGTATCAAGTCCAAATCATAATG...AAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CAA 90 bp CTGGGCAGCATGTCAGCCCTGAAGGTTACAAATCCAGTATTTGACTGCAAAACACATTATGATTTGGACTaGATACCTGCCTCGGGCCAG +
Preference number: 5 (lower is better)
Translates to: LGSMSALKVTNPVFDCKTHYDLD*IPASGQ
Trigger: CTGGCCCGAGGCAGGTATCAAGTCCAAATCATAATG...TGTTTTGCAGTCAAATACTGGATTTGTAACCTTCAGGGCTGACATGCTGCCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CAA 90 bp ACTTTTCACAAGATGCTGTGTATAGGCTATTTTCACTATCTCCTCAGTCAACGCAACCAGAGGACTGCCTaGGTAGAGCTGGATGCGCTG +
Preference number: 5 (lower is better)
Translates to: TFHKMLCIGYFHYLLSQRNQRTA*VELDAL
Trigger: CAGCGCATCCAGCTCTACCAAGGCAGTCCTCTGGTT...GCGTTGACTGAGGAGATAGTGAAAATAGCCTATACACAGCATCTTGTGAAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CAA 90 bp GCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTCACTATCTCCTCCCCTTTCCACAGGTCTaGAGCTCCAGCACAGAACAC +
Preference number: 5 (lower is better)
Translates to: AASTFHKMLCIGYFHYLLPFPQV*SSSTEH
Trigger: GTGTTCTGTGCTGGAGCTCAAGACCTGTGGAAAGGG...GAGGAGATAGTGAAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CAA 90 bp CTGGGCAGCATGTCAGCCCTGAAGGTTACAAATCCAGTATTTGACTGCAAAACATTTTTGCCCTATTATTaGCTGCAACCACGGCTGCCA +
Preference number: 5 (lower is better)
Translates to: LGSMSALKVTNPVFDCKTFLPYY*LQPRLP
Trigger: TGGCAGCCGTGGTTGCAGCAAATAATAGGGCAAAAA...TGTTTTGCAGTCAAATACTGGATTTGTAACCTTCAGGGCTGACATGCTGCCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CAA 90 bp CCCTCTTCTGGGCAGAATCGGAGGTATAGAAAGGAATCTGAATTCTCCAGGGCACATAATACTCTTTGCTaGACTGGCACCAACGTTAAG +
Preference number: 5 (lower is better)
Translates to: PSSGQNRRYRKESEFSRAHNTLC*TGTNVK
Trigger: CTTAACGTTGGTGCCAGTCAAGCAAAGAGTATTATG...TGCCCTGGAGAATTCAGATTCCTTTCTATACCTCCGATTCTGCCCAGAAGAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CAA 90 bp GCTGCAACCACGGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTGCTGACTCTACACATTaGAGTTTACAGAGCAGAGCC +
Preference number: 5 (lower is better)
Translates to: AATTAASTFHKMLCIGYFADSTH*SLQSRA
Trigger: GGCTCTGCTCTGTAAACTCAAATGTGTAGAGTCAGC...AAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CAA 90 bp CCCTCTTCTGGGCAGAATCGGAGGTATAGAAAGGAATCTGAATTCTCCAGGGCATTGGAAGCTACGGAATaGTTGCTGACTCTACACATT +
Preference number: 5 (lower is better)
Translates to: PSSGQNRRYRKESEFSRALEATE*LLTLHI
Trigger: AATGTGTAGAGTCAGCAACAATTCCGTAGCTTCCAA...TGCCCTGGAGAATTCAGATTCCTTTCTATACCTCCGATTCTGCCCAGAAGAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CAA 90 bp CCCTCTTCTGGGCAGAATCGGAGGTATAGAAAGGAATCTGAATTCTCCAGGGCATCAATTCTGAGTCAGTaGGAAGCTACGGAATTGTTG +
Preference number: 5 (lower is better)
Translates to: PSSGQNRRYRKESEFSRASILSQ*EATELL
Trigger: CAACAATTCCGTAGCTTCCAACTGACTCAGAATTGA...TGCCCTGGAGAATTCAGATTCCTTTCTATACCTCCGATTCTGCCCAGAAGAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CAA 90 bp TTTTTGCCCTATTATTTGCTGCAACCACGGCTGCCAGTACTTTTCACAAGATGCCATTATGATTTGGACTaGATACCTGCCTCGGGCCAG +
Preference number: 5 (lower is better)
Translates to: FLPYYLLQPRLPVLFTRCHYDLD*IPASGQ
Trigger: CTGGCCCGAGGCAGGTATCAAGTCCAAATCATAATG...GCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGCAGCAAATAATAGGGCAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CAA 90 bp TTCTTCAGTGCTACACTCCAACTAAACTGTACAGTAAGTTCTGCAGAAATGGATAACCAGAGGACTGCCTaGGTAGAGCTGGATGCGCTG +
Preference number: 5 (lower is better)
Translates to: FFSATLQLNCTVSSAEMDNQRTA*VELDAL
Trigger: CAGCGCATCCAGCTCTACCAAGGCAGTCCTCTGGTT...ATCCATTTCTGCAGAACTTACTGTACAGTTTAGTTGGAGTGTAGCACTGAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CAA 90 bp GCAACCACGGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTCACCCACCCTTGCCCTTTTaGTTTGATGGAAGGGTAGTT +
Preference number: 5 (lower is better)
Translates to: ATTAASTFHKMLCIGYFHPPLPF*FDGRVV
Trigger: AACTACCCTTCCATCAAACAAAAAGGGCAAGGGTGG...GTGAAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CAA 90 bp TTCTTCAGTGCTACACTCCAACTAAACTGTACAGTAAGTTCTGCAGAAATGGATCCGGGGCTCCCACCCTaGCCCTTTTTGTTTGATGGA +
Preference number: 5 (lower is better)
Translates to: FFSATLQLNCTVSSAEMDPGLPP*PFLFDG
Trigger: TCCATCAAACAAAAAGGGCAAGGGTGGGAGCCCCGG...ATCCATTTCTGCAGAACTTACTGTACAGTTTAGTTGGAGTGTAGCACTGAAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CAA 90 bp TTTTTGCCCTATTATTTGCTGCAACCACGGCTGCCAGTACTTTTCACAAGATGCCCACCCTTGCCCTTTTaGTTTGATGGAAGGGTAGTT +
Preference number: 5 (lower is better)
Translates to: FLPYYLLQPRLPVLFTRCPPLPF*FDGRVV
Trigger: AACTACCCTTCCATCAAACAAAAAGGGCAAGGGTGG...GCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGCAGCAAATAATAGGGCAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CAA 90 bp GCCTTGGACTTGAAGGTCTGGCCACATGACTCATTCTGTAAGGTTAACAACTGGTTCGTTTCAGTTCTTTaGGAATGCAACCCTGCAGTT +
Preference number: 5 (lower is better)
Translates to: ALDLKVWPHDSFCKVNNWFVSVL*ECNPAV
Trigger: AACTGCAGGGTTGCATTCCAAAAGAACTGAAACGAA...CCAGTTGTTAACCTTACAGAATGAGTCATGTGGCCAGACCTTCAAGTCCAAGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CAA 90 bp GGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTCACTATCTCCTTTTTTGCCCTATTATTaGCTGCAACCACGGCTGCCA +
Preference number: 5 (lower is better)
Translates to: GCQYFSQDAVYRLFSLSPFLPYY*LQPRLP
Trigger: TGGCAGCCGTGGTTGCAGCAAATAATAGGGCAAAAA...AGGAGATAGTGAAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000360768.5
ENST00000434382.2
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CAA 90 bp GCAACCACGGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTCACCATAATACTCTTTGCTaGACTGGCACCAACGTTAAG +
Preference number: 5 (lower is better)
Translates to: ATTAASTFHKMLCIGYFHHNTLC*TGTNVK
Trigger: CTTAACGTTGGTGCCAGTCAAGCAAAGAGTATTATG...GTGAAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360768.5
ENST00000434382.2
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CAA 90 bp GCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTCACTATCTCCTCGCTGACTCTACACATTaGAGTTTACAGAGCAGAGCC +
Preference number: 5 (lower is better)
Translates to: AASTFHKMLCIGYFHYLLADSTH*SLQSRA
Trigger: GGCTCTGCTCTGTAAACTCAAATGTGTAGAGTCAGC...GAGGAGATAGTGAAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CAA 90 bp ACTTTTCACAAGATGCTGTGTATAGGCTATTTTCACTATCTCCTCAGTCAACGCTGGGACACGAGGAACTaGTTTAGCACAACCGATGTC +
Preference number: 5 (lower is better)
Translates to: TFHKMLCIGYFHYLLSQRWDTRN*FSTTDV
Trigger: GACATCGGTTGTGCTAAACAAGTTCCTCGTGTCCCA...GCGTTGACTGAGGAGATAGTGAAAATAGCCTATACACAGCATCTTGTGAAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CAA 90 bp GCCTTGGACTTGAAGGTCTGGCCACATGACTCATTCTGTAAGGTTAACAACTGGAATTTCACTGTAGTCTaGGTCCTCTTTGAATGCAGT +
Preference number: 5 (lower is better)
Translates to: ALDLKVWPHDSFCKVNNWNFTVV*VLFECS
Trigger: ACTGCATTCAAAGAGGACCAAGACTACAGTGAAATT...CCAGTTGTTAACCTTACAGAATGAGTCATGTGGCCAGACCTTCAAGTCCAAGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CAA 90 bp CTGGGCAGCATGTCAGCCCTGAAGGTTACAAATCCAGTATTTGACTGCAAAACATCACAGTGGGTCTCCTaGTTGGCATCTAATAATGAT +
Preference number: 5 (lower is better)
Translates to: LGSMSALKVTNPVFDCKTSQWVS*LASNND
Trigger: ATCATTATTAGATGCCAACAAGGAGACCCACTGTGA...TGTTTTGCAGTCAAATACTGGATTTGTAACCTTCAGGGCTGACATGCTGCCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CAA 90 bp GCCTTGGACTTGAAGGTCTGGCCACATGACTCATTCTGTAAGGTTAACAACTGGACACGAGGACAGAAATaGCATATTAGGTCATTAGGT +
Preference number: 5 (lower is better)
Translates to: ALDLKVWPHDSFCKVNNWTRGQK*HIRSLG
Trigger: ACCTAATGACCTAATATGCAATTTCTGTCCTCGTGT...CCAGTTGTTAACCTTACAGAATGAGTCATGTGGCCAGACCTTCAAGTCCAAGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CAA 90 bp GCCTTGGACTTGAAGGTCTGGCCACATGACTCATTCTGTAAGGTTAACAACTGGGAACACAAACTGGACTaGAACGTTCCAATTCAATTT +
Preference number: 5 (lower is better)
Translates to: ALDLKVWPHDSFCKVNNWEHKLD*NVPIQF
Trigger: AAATTGAATTGGAACGTTCAAGTCCAGTTTGTGTTC...CCAGTTGTTAACCTTACAGAATGAGTCATGTGGCCAGACCTTCAAGTCCAAGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360768.5
ENST00000434382.2
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CAA 90 bp ACTTTTCACAAGATGCTGTGTATAGGCTATTTTCACTATCTCCTCAGTCAACGCGCTGACTCTACACATTaGAGTTTACAGAGCAGAGCC +
Preference number: 5 (lower is better)
Translates to: TFHKMLCIGYFHYLLSQRADSTH*SLQSRA
Trigger: GGCTCTGCTCTGTAAACTCAAATGTGTAGAGTCAGC...GCGTTGACTGAGGAGATAGTGAAAATAGCCTATACACAGCATCTTGTGAAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CAA 90 bp GCTGCAACCACGGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTAAAGTTCATTATGATTaGGACTTGATACCTGCCTCG +
Preference number: 5 (lower is better)
Translates to: AATTAASTFHKMLCIGYFKVHYD*DLIPAS
Trigger: CGAGGCAGGTATCAAGTCCAAATCATAATGAACTTT...AAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CAA 90 bp TTCTTCAGTGCTACACTCCAACTAAACTGTACAGTAAGTTCTGCAGAAATGGATTGGGACACGAGGAACTaGTTTAGCACAACCGATGTC +
Preference number: 5 (lower is better)
Translates to: FFSATLQLNCTVSSAEMDWDTRN*FSTTDV
Trigger: GACATCGGTTGTGCTAAACAAGTTCCTCGTGTCCCA...ATCCATTTCTGCAGAACTTACTGTACAGTTTAGTTGGAGTGTAGCACTGAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CAA 90 bp ATTTGCTGCAACCACGGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTAACACGAGGACAGAAATaGCATATTAGGTCATTAGGT +
Preference number: 5 (lower is better)
Translates to: ICCNHGCQYFSQDAVYRLTRGQK*HIRSLG
Trigger: ACCTAATGACCTAATATGCAATTTCTGTCCTCGTGT...TAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGCAGCAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CAA 90 bp TTTTTGCCCTATTATTTGCTGCAACCACGGCTGCCAGTACTTTTCACAAGATGCTTCGTTTCAGTTCTTTaGGAATGCAACCCTGCAGTT +
Preference number: 5 (lower is better)
Translates to: FLPYYLLQPRLPVLFTRCFVSVL*ECNPAV
Trigger: AACTGCAGGGTTGCATTCCAAAAGAACTGAAACGAA...GCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGCAGCAAATAATAGGGCAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CAA 90 bp GCCTTGGACTTGAAGGTCTGGCCACATGACTCATTCTGTAAGGTTAACAACTGGCAAAGGAATCAAGTTTaGTGTTCCAGTATGTCAAAG +
Preference number: 5 (lower is better)
Translates to: ALDLKVWPHDSFCKVNNWQRNQV*CSSMSK
Trigger: CTTTGACATACTGGAACACAAAACTTGATTCCTTTG...CCAGTTGTTAACCTTACAGAATGAGTCATGTGGCCAGACCTTCAAGTCCAAGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CAA 90 bp ACTCCAACTAAACTGTACAGTAAGTTCTGCAGAAATGGATCTAATATTTCTACCAAGCCGCCACAGCGCTaGCTGTCATGCCAAGTAATA +
Preference number: 5 (lower is better)
Translates to: TPTKLYSKFCRNGSNISTKPPQR*LSCQVI
Trigger: TATTACTTGGCATGACAGCAAGCGCTGTGGCGGCTT...GGTAGAAATATTAGATCCATTTCTGCAGAACTTACTGTACAGTTTAGTTGGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CAA 90 bp GCAACCACGGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTCACGAACACAAACTGGACTaGAACGTTCCAATTCAATTT +
Preference number: 5 (lower is better)
Translates to: ATTAASTFHKMLCIGYFHEHKLD*NVPIQF
Trigger: AAATTGAATTGGAACGTTCAAGTCCAGTTTGTGTTC...GTGAAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360768.5
ENST00000434382.2
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CAA 90 bp GCTGCAACCACGGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTGAACACAAACTGGACTaGAACGTTCCAATTCAATTT +
Preference number: 5 (lower is better)
Translates to: AATTAASTFHKMLCIGYFEHKLD*NVPIQF
Trigger: AAATTGAATTGGAACGTTCAAGTCCAGTTTGTGTTC...AAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360768.5
ENST00000434382.2
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CAA 90 bp GCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTCACTATCTCCTCTCAATTCTGAGTCAGTaGGAAGCTACGGAATTGTTG +
Preference number: 5 (lower is better)
Translates to: AASTFHKMLCIGYFHYLLSILSQ*EATELL
Trigger: CAACAATTCCGTAGCTTCCAACTGACTCAGAATTGA...GAGGAGATAGTGAAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CAA 90 bp AAAGTAAAGTTAAAGCTTGTCTTTGATTGGCTCGGCGTATCCTTTTTGTATCCATGGGACACGAGGAACTaGTTTAGCACAACCGATGTC +
Preference number: 5 (lower is better)
Translates to: KVKLKLVFDWLGVSFLYPWDTRN*FSTTDV
Trigger: GACATCGGTTGTGCTAAACAAGTTCCTCGTGTCCCA...TGGATACAAAAAGGATACGCCGAGCCAATCAAAGACAAGCTTTAACTTTACTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CAA 90 bp GGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTCACTATCTCCTTCACAGTGGGTCTCCTaGTTGGCATCTAATAATGAT +
Preference number: 5 (lower is better)
Translates to: GCQYFSQDAVYRLFSLSPSQWVS*LASNND
Trigger: ATCATTATTAGATGCCAACAAGGAGACCCACTGTGA...AGGAGATAGTGAAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CAA 90 bp TTTTTGCCCTATTATTTGCTGCAACCACGGCTGCCAGTACTTTTCACAAGATGCACACGAGGACAGAAATaGCATATTAGGTCATTAGGT +
Preference number: 5 (lower is better)
Translates to: FLPYYLLQPRLPVLFTRCTRGQK*HIRSLG
Trigger: ACCTAATGACCTAATATGCAATTTCTGTCCTCGTGT...GCATCTTGTGAAAAGTACTGGCAGCCGTGGTTGCAGCAAATAATAGGGCAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CAA 90 bp GCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTCACTATCTCCTCCAGCACAGAACACACTaGTTCTATTCCGTGAAGTAT +
Preference number: 5 (lower is better)
Translates to: AASTFHKMLCIGYFHYLLQHRTH*FYSVKY
Trigger: ATACTTCACGGAATAGAACAAGTGTGTTCTGTGCTG...GAGGAGATAGTGAAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CAA 90 bp AAAGTAAAGTTAAAGCTTGTCTTTGATTGGCTCGGCGTATCCTTTTTGTATCCATTTTTGCCCTATTATTaGCTGCAACCACGGCTGCCA +
Preference number: 5 (lower is better)
Translates to: KVKLKLVFDWLGVSFLYPFLPYY*LQPRLP
Trigger: TGGCAGCCGTGGTTGCAGCAAATAATAGGGCAAAAA...TGGATACAAAAAGGATACGCCGAGCCAATCAAAGACAAGCTTTAACTTTACTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000360768.5
ENST00000434382.2
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CAA 90 bp ACTTTTCACAAGATGCTGTGTATAGGCTATTTTCACTATCTCCTCAGTCAACGCTTGGAAGCTACGGAATaGTTGCTGACTCTACACATT +
Preference number: 5 (lower is better)
Translates to: TFHKMLCIGYFHYLLSQRLEATE*LLTLHI
Trigger: AATGTGTAGAGTCAGCAACAATTCCGTAGCTTCCAA...GCGTTGACTGAGGAGATAGTGAAAATAGCCTATACACAGCATCTTGTGAAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CAA 90 bp GCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTCACTATCTCCTCAAAAACCATTGGATATaGGGACACGAGGAACTTGTT +
Preference number: 5 (lower is better)
Translates to: AASTFHKMLCIGYFHYLLKNHWI*GHEELV
Trigger: AACAAGTTCCTCGTGTCCCAATATCCAATGGTTTTT...GAGGAGATAGTGAAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CAA 90 bp AAAGTAAAGTTAAAGCTTGTCTTTGATTGGCTCGGCGTATCCTTTTTGTATCCACCACCCTTGCCCTTTTaGTTTGATGGAAGGGTAGTT +
Preference number: 5 (lower is better)
Translates to: KVKLKLVFDWLGVSFLYPPPLPF*FDGRVV
Trigger: AACTACCCTTCCATCAAACAAAAAGGGCAAGGGTGG...TGGATACAAAAAGGATACGCCGAGCCAATCAAAGACAAGCTTTAACTTTACTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CAA 90 bp CTGGGCACACAGCTAGTTAAACCTGAGTTATTTCACCGGAAATTTACCTTTAGTCAGCACAGAACACACTaGTTCTATTCCGTGAAGTAT +
Preference number: 5 (lower is better)
Translates to: LGTQLVKPELFHRKFTFSQHRTH*FYSVKY
Trigger: ATACTTCACGGAATAGAACAAGTGTGTTCTGTGCTG...ACTAAAGGTAAATTTCCGGTGAAATAACTCAGGTTTAACTAGCTGTGTGCCCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CAA 90 bp GGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTCACTATCTCCTGAACACAAACTGGACTaGAACGTTCCAATTCAATTT +
Preference number: 5 (lower is better)
Translates to: GCQYFSQDAVYRLFSLSPEHKLD*NVPIQF
Trigger: AAATTGAATTGGAACGTTCAAGTCCAGTTTGTGTTC...AGGAGATAGTGAAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360768.5
ENST00000434382.2
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CAA 90 bp CTGGGCACACAGCTAGTTAAACCTGAGTTATTTCACCGGAAATTTACCTTTAGTAATTTCACTGTAGTCTaGGTCCTCTTTGAATGCAGT +
Preference number: 5 (lower is better)
Translates to: LGTQLVKPELFHRKFTFSNFTVV*VLFECS
Trigger: ACTGCATTCAAAGAGGACCAAGACTACAGTGAAATT...ACTAAAGGTAAATTTCCGGTGAAATAACTCAGGTTTAACTAGCTGTGTGCCCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CAA 90 bp ACTTTTCACAAGATGCTGTGTATAGGCTATTTTCACTATCTCCTCAGTCAACGCAATTTCACTGTAGTCTaGGTCCTCTTTGAATGCAGT +
Preference number: 5 (lower is better)
Translates to: TFHKMLCIGYFHYLLSQRNFTVV*VLFECS
Trigger: ACTGCATTCAAAGAGGACCAAGACTACAGTGAAATT...GCGTTGACTGAGGAGATAGTGAAAATAGCCTATACACAGCATCTTGTGAAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CAA 90 bp TTCTTCAGTGCTACACTCCAACTAAACTGTACAGTAAGTTCTGCAGAAATGGATTTCGTTTCAGTTCTTTaGGAATGCAACCCTGCAGTT +
Preference number: 5 (lower is better)
Translates to: FFSATLQLNCTVSSAEMDFVSVL*ECNPAV
Trigger: AACTGCAGGGTTGCATTCCAAAAGAACTGAAACGAA...ATCCATTTCTGCAGAACTTACTGTACAGTTTAGTTGGAGTGTAGCACTGAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CAA 90 bp GGCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTCACTATCTCCTCAAAGGAATCAAGTTTaGTGTTCCAGTATGTCAAAG +
Preference number: 5 (lower is better)
Translates to: GCQYFSQDAVYRLFSLSPQRNQV*CSSMSK
Trigger: CTTTGACATACTGGAACACAAAACTTGATTCCTTTG...AGGAGATAGTGAAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CAA 90 bp GCTGCCAGTACTTTTCACAAGATGCTGTGTATAGGCTATTTTCACTATCTCCTCCAAAGGAATCAAGTTTaGTGTTCCAGTATGTCAAAG +
Preference number: 5 (lower is better)
Translates to: AASTFHKMLCIGYFHYLLQRNQV*CSSMSK
Trigger: CTTTGACATACTGGAACACAAAACTTGATTCCTTTG...GAGGAGATAGTGAAAATAGCCTATACACAGCATCTTGTGAAAAGTACTGGCAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CAA 90 bp AAAGTAAAGTTAAAGCTTGTCTTTGATTGGCTCGGCGTATCCTTTTTGTATCCACATAATACTCTTTGCTaGACTGGCACCAACGTTAAG +
Preference number: 5 (lower is better)
Translates to: KVKLKLVFDWLGVSFLYPHNTLC*TGTNVK
Trigger: CTTAACGTTGGTGCCAGTCAAGCAAAGAGTATTATG...TGGATACAAAAAGGATACGCCGAGCCAATCAAAGACAAGCTTTAACTTTACTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360768.5
ENST00000434382.2
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CAA 90 bp AAAGTAAAGTTAAAGCTTGTCTTTGATTGGCTCGGCGTATCCTTTTTGTATCCATCAATTCTGAGTCAGTaGGAAGCTACGGAATTGTTG +
Preference number: 5 (lower is better)
Translates to: KVKLKLVFDWLGVSFLYPSILSQ*EATELL
Trigger: CAACAATTCCGTAGCTTCCAACTGACTCAGAATTGA...TGGATACAAAAAGGATACGCCGAGCCAATCAAAGACAAGCTTTAACTTTACTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CAA 90 bp ACTCCAACTAAACTGTACAGTAAGTTCTGCAGAAATGGATCTAATATTTCTACCTTGGAAGCTACGGAATaGTTGCTGACTCTACACATT +
Preference number: 5 (lower is better)
Translates to: TPTKLYSKFCRNGSNISTLEATE*LLTLHI
Trigger: AATGTGTAGAGTCAGCAACAATTCCGTAGCTTCCAA...GGTAGAAATATTAGATCCATTTCTGCAGAACTTACTGTACAGTTTAGTTGGAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CAA 90 bp AAAGTAAAGTTAAAGCTTGTCTTTGATTGGCTCGGCGTATCCTTTTTGTATCCAAAAGTTCATTATGATTaGGACTTGATACCTGCCTCG +
Preference number: 5 (lower is better)
Translates to: KVKLKLVFDWLGVSFLYPKVHYD*DLIPAS
Trigger: CGAGGCAGGTATCAAGTCCAAATCATAATGAACTTT...TGGATACAAAAAGGATACGCCGAGCCAATCAAAGACAAGCTTTAACTTTACTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CAA 90 bp AAAGTAAAGTTAAAGCTTGTCTTTGATTGGCTCGGCGTATCCTTTTTGTATCCAAAAAACCATTGGATATaGGGACACGAGGAACTTGTT +
Preference number: 5 (lower is better)
Translates to: KVKLKLVFDWLGVSFLYPKNHWI*GHEELV
Trigger: AACAAGTTCCTCGTGTCCCAATATCCAATGGTTTTT...TGGATACAAAAAGGATACGCCGAGCCAATCAAAGACAAGCTTTAACTTTACTTT
38% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS-3UTR CAA 90 bp ACTCCAACTAAACTGTACAGTAAGTTCTGCAGAAATGGATCTAATATTTCTACCAAAAACCATTGGATATaGGGACACGAGGAACTTGTT +
Preference number: 5 (lower is better)
Translates to: TPTKLYSKFCRNGSNISTKNHWI*GHEELV
Trigger: AACAAGTTCCTCGTGTCCCAATATCCAATGGTTTTT...GGTAGAAATATTAGATCCATTTCTGCAGAACTTACTGTACAGTTTAGTTGGAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360768.5
ENST00000648179.1
ENST00000648187.1
CDS GCA 72 bp GAGACTGTTAGGGTGGAGTCTGTCGGGCGTCAGTCCTaGTTGGGTTGCAGCTGCCGCTTCCAGGCCTCGTTC +
Preference number: 6 (lower is better)
Translates to: ETVRVESVGRQS*LGCSCRFQASF
Trigger: GAACGAGGCCTGGAAGCGGCAGCTGCAACCCAAGCAGGACTGACGCCCGACAGACTCCACCCTAACAGTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360768.5
ENST00000434382.2
ENST00000648179.1
ENST00000648187.1
CDS CCA 72 bp CTGTTAGGGTGGAGTCTGTCGGGCGTCAGTCCTGCTTaGGTTGCAGCTGCCGCTTCCAGGCCTCGTTCAAGT +
Preference number: 6 (lower is better)
Translates to: LLGWSLSGVSPA*VAAAASRPRSS
Trigger: ACTTGAACGAGGCCTGGAAGCGGCAGCTGCAACCCAAGCAGGACTGACGCCCGACAGACTCCACCCTAACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360768.5
ENST00000434382.2
ENST00000648179.1
ENST00000648187.1
CDS CAA 72 bp ACTGTTAGGGTGGAGTCTGTCGGGCGTCAGTCCTGCTaGGGTTGCAGCTGCCGCTTCCAGGCCTCGTTCAAG +
Preference number: 6 (lower is better)
Translates to: TVRVESVGRQSC*GCSCRFQASFK
Trigger: CTTGAACGAGGCCTGGAAGCGGCAGCTGCAACCCAAGCAGGACTGACGCCCGACAGACTCCACCCTAACAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360768.5
ENST00000434382.2
ENST00000648179.1
ENST00000648187.1