Pregenerated sensors for VKORC1 (Homo sapiens)
Ensembl gene IDs: ENSG00000167397Ensembl transcript IDs: ENST00000319788.11, ENST00000354895.4, ENST00000394971.7, ENST00000420057.2, ENST00000472468.1, ENST00000498155.1
Found 45 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CCAGCCACGGAGCAGGGGCCGGGCGGCGAATGGCCGCGCCCCTCCTaGCCCTCTGACTCGGCGATTGGCCGGCCGTGCTCGCACTCCACG | + |
|
Preference number: 5 (lower is better) Translates to: PATEQGPGGEWPRPS*PSDSAIGRPCSHST Trigger: CGTGGAGTGCGAGCACGGCCGGCCAATCGCCGAGTCAGAGGGCCAGGAGGGGCGCGGCCATTCGCCGCCCGGCCCCTGCTCCGTGGCTGG 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000319788.11 ENST00000354895.4 |
||
| CDS TCA 90 bp | GGAGCAGGGGCCGGGCGGCGAATGGCCGCGCCCCTCCTGGCCCTCTaGCTCGGCGATTGGCCGGCCGTGCTCGCACTCCACGACCCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: GAGAGRRMAAPLLAL*LGDWPAVLALHDPN Trigger: ATTTGGGTCGTGGAGTGCGAGCACGGCCGGCCAATCGCCGAGTCAGAGGGCCAGGAGGGGCGCGGCCATTCGCCGCCCGGCCCCTGCTCC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000319788.11 ENST00000354895.4 |
||
| CDS CCA 90 bp | GTCCGTTCCCCGGGCACACCGATCCCAGACTCCAGAATAATCATCTaGCATCCTGGCCGCCCTGCTCCGAGGCCCCACGCCTCCCACTCC | + |
|
Preference number: 5 (lower is better) Translates to: VRSPGTPIPDSRIII*HPGRPAPRPHASHS Trigger: GGAGTGGGAGGCGTGGGGCCTCGGAGCAGGGCGGCCAGGATGCCAGATGATTATTCTGGAGTCTGGGATCGGTGTGCCCGGGGAACGGAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000394971.7 |
||
| CDS CCA 90 bp | CTGACTCGGCGATTGGCCGGCCGTGCTCGCACTCCACGACCCAAATaGCTGTTCCAGGGCGCTAGTCAAGCGGGCGAGTTAGGAAAACAG | + |
|
Preference number: 5 (lower is better) Translates to: LTRRLAGRARTPRPK*LFQGASQAGELGKQ Trigger: CTGTTTTCCTAACTCGCCCGCTTGACTAGCGCCCTGGAACAGCCATTTGGGTCGTGGAGTGCGAGCACGGCCGGCCAATCGCCGAGTCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000319788.11 ENST00000354895.4 |
||
| CDS GCA 90 bp | ATTTCAGGCACCATTCGGGCTGCAGCCTCCCATCCTCCCGGGTCCTaGCTCACCAGTGCTTCCTGGTGGTCGGTCTCCCTTTCTCCCATA | + |
|
Preference number: 5 (lower is better) Translates to: ISGTIRAAASHPPGS*LTSASWWSVSLSPI Trigger: TATGGGAGAAAGGGAGACCGACCACCAGGAAGCACTGGTGAGGCAGGACCCGGGAGGATGGGAGGCTGCAGCCCGAATGGTGCCTGAAAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000420057.2 ENST00000498155.1 |
||
| CDS CCA 90 bp | GTCTGGTCCCTTGCCTCGCACTCTTATTTCGAACACCAGTATCGCTaGGTAGCTCAGCCCCTGTGCAACGACCCCGCGAGCAGTCCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: VWSLASHSYFEHQYR*VAQPLCNDPASSPA Trigger: GGCTGGACTGCTCGCGGGGTCGTTGCACAGGGGCTGAGCTACCCAGCGATACTGGTGTTCGAAATAAGAGTGCGAGGCAAGGGACCAGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000394971.7 |
||
| CDS CCA 90 bp | GGTGGGGTGGGGTGGAACCAGGTTAGGACTGTCAACCCAGTGCCTTaGACCCTGCCCGAGAAAGGTGATTTCCAAGAAGCCACCTGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: GGVGWNQVRTVNPVP*TLPEKGDFQEATWA Trigger: AGCCCAGGTGGCTTCTTGGAAATCACCTTTCTCGGGCAGGGTCCAAGGCACTGGGTTGACAGTCCTAACCTGGTTCCACCCCACCCCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000472468.1 |
||
| CDS CCA 90 bp | TACCGCCATCCTGCCTCCCCGCCTTTCCTGGTCACCGTTATTCCTTaGCATCCAATTCACGTGCGAGTCCCCGGAATAATCCCAGTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: YRHPASPPFLVTVIP*HPIHVRVPGIIPVP Trigger: GGGGACTGGGATTATTCCGGGGACTCGCACGTGAATTGGATGCCAAGGAATAACGGTGACCAGGAAAGGCGGGGAGGCAGGATGGCGGTA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000394971.7 |
||
| CDS CCA 90 bp | GCAGCCTCCCATCCTCCCGGGTCCTGCCTCACCAGTGCTTCCTGGTaGTCGGTCTCCCTTTCTCCCATACATTCACAGAACCACTCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: AASHPPGSCLTSASW*SVSLSPIHSQNHSF Trigger: AAAGGAGTGGTTCTGTGAATGTATGGGAGAAAGGGAGACCGACCACCAGGAAGCACTGGTGAGGCAGGACCCGGGAGGATGGGAGGCTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000420057.2 ENST00000498155.1 |
||
| CDS CCA 90 bp | GTGCCTTGGACCCTGCCCGAGAAAGGTGATTTCCAAGAAGCCACCTaGGCTATCCTCTGTTCCCCGACCTCCCATCCTAGTCCAAGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: VPWTLPEKGDFQEAT*AILCSPTSHPSPRV Trigger: GACCCTTGGACTAGGATGGGAGGTCGGGGAACAGAGGATAGCCCAGGTGGCTTCTTGGAAATCACCTTTCTCGGGCAGGGTCCAAGGCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000472468.1 |
||
| CDS CCA 90 bp | AGACCATCGTCAATCTCTACCGCCATCCTGCCTCCCCGCCTTTCCTaGTCACCGTTATTCCTTGGCATCCAATTCACGTGCGAGTCCCCG | + |
|
Preference number: 5 (lower is better) Translates to: RPSSISTAILPPRLS*SPLFLGIQFTCESP Trigger: CGGGGACTCGCACGTGAATTGGATGCCAAGGAATAACGGTGACCAGGAAAGGCGGGGAGGCAGGATGGCGGTAGAGATTGACGATGGTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000394971.7 |
||
| CDS GCA 90 bp | TGGGGTGGAACCAGGTTAGGACTGTCAACCCAGTGCCTTGGACCCTaGCCGAGAAAGGTGATTTCCAAGAAGCCACCTGGGCTATCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: WGGTRLGLSTQCLGP*PRKVISKKPPGLSS Trigger: AGAGGATAGCCCAGGTGGCTTCTTGGAAATCACCTTTCTCGGGCAGGGTCCAAGGCACTGGGTTGACAGTCCTAACCTGGTTCCACCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000472468.1 |
||
| CDS TCA 90 bp | ATCCAGCGAATACGGCGATCCGATTCGGGAACCAAGCATTTCCCCTaGAACTATTTCAGGCACCATTCGGGCTGCAGCCTCCCATCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: IQRIRRSDSGTKHFP*NYFRHHSGCSLPSS Trigger: GGAGGATGGGAGGCTGCAGCCCGAATGGTGCCTGAAATAGTTTCAGGGGAAATGCTTGGTTCCCGAATCGGATCGCCGTATTCGCTGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000420057.2 ENST00000498155.1 |
||
| CDS CCA 90 bp | ATTCACGTGCGAGTCCCCGGAATAATCCCAGTCCCCAGCACTGTCTaGTCCCTTGCCTCGCACTCTTATTTCGAACACCAGTATCGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: IHVRVPGIIPVPSTV*SLASHSYFEHQYRW Trigger: CCAGCGATACTGGTGTTCGAAATAAGAGTGCGAGGCAAGGGACCAGACAGTGCTGGGGACTGGGATTATTCCGGGGACTCGCACGTGAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000394971.7 |
||
| CDS TCA 90 bp | CATCAACTCAACAGTCAGTCTCTCCTTTCCAAGCTGTGGGCCAGATaGGGTCTCTCCTTCACAGACGTCCCATCTGATGGTGACCCATCT | + |
|
Preference number: 5 (lower is better) Translates to: HQLNSQSLLSKLWAR*GLSFTDVPSDGDPS Trigger: AGATGGGTCACCATCAGATGGGACGTCTGTGAAGGAGAGACCTCATCTGGCCCACAGCTTGGAAAGGAGAGACTGACTGTTGAGTTGATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000498155.1 |
||
| CDS TCA 90 bp | AGTATCCTAACCTCTCTACTATCATGGCGCCCGCCTGGCAACACCTaGGCTTGCATCAACTCAACAGTCAGTCTCTCCTTTCCAAGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: SILTSLLSWRPPGNT*ACINSTVSLSFPSC Trigger: ACAGCTTGGAAAGGAGAGACTGACTGTTGAGTTGATGCAAGCTCAGGTGTTGCCAGGCGGGCGCCATGATAGTAGAGAGGTTAGGATACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000498155.1 |
||
| CDS GCA 90 bp | CCATCTCTCCTACACCTTCAACCTCTCCATCCTCCCCATCTACACTaGAACTTGTTTCTCTTTCCCATCTCAGAAACAGCAACAAATCTC | + |
|
Preference number: 5 (lower is better) Translates to: PSLLHLQPLHPPHLH*NLFLFPISETATNL Trigger: GAGATTTGTTGCTGTTTCTGAGATGGGAAAGAGAAACAAGTTGCAGTGTAGATGGGGAGGATGGAGAGGTTGAAGGTGTAGGAGAGATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000498155.1 |
||
| CDS CCA 90 bp | TCCTCTCCCGGCATTATCCCATCTACCCCTCCACATTCAAGTTTTTaGAAAGATTCTACACTCCCAGTCTCTACTTCCTCACTTCTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SSPGIIPSTPPHSSF*KDSTLPVSTSSLLP Trigger: AGGAAGAAGTGAGGAAGTAGAGACTGGGAGTGTAGAATCTTTCCAAAAACTTGAATGTGGAGGGGTAGATGGGATAATGCCGGGAGAGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000498155.1 |
||
| CDS CCA 72 bp | GAGCAGGGGCCGGGCGGCGAATGGCCGCGCCCCTCCTaGCCCTCTGACTCGGCGATTGGCCGGCCGTGCTCG | + |
|
Preference number: 6 (lower is better) Translates to: EQGPGGEWPRPS*PSDSAIGRPCS Trigger: CGAGCACGGCCGGCCAATCGCCGAGTCAGAGGGCCAGGAGGGGCGCGGCCATTCGCCGCCCGGCCCCTGCTC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000319788.11 ENST00000354895.4 |
||
| CDS TCA 72 bp | GCCGGGCGGCGAATGGCCGCGCCCCTCCTGGCCCTCTaGCTCGGCGATTGGCCGGCCGTGCTCGCACTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: AGRRMAAPLLAL*LGDWPAVLALH Trigger: GTGGAGTGCGAGCACGGCCGGCCAATCGCCGAGTCAGAGGGCCAGGAGGGGCGCGGCCATTCGCCGCCCGGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000319788.11 ENST00000354895.4 |
||
| CDS CAA 90 bp | CGGGCGGCGAATGGCCGCGCCCCTCCTGGCCCTCTGACTCGGCGATaGGCCGGCCGTGCTCGCACTCCACGACCCAAATGGCTGTTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: RAANGRAPPGPLTRR*AGRARTPRPKWLFQ Trigger: CTGGAACAGCCATTTGGGTCGTGGAGTGCGAGCACGGCCGGCCAATCGCCGAGTCAGAGGGCCAGGAGGGGCGCGGCCATTCGCCGCCCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000319788.11 ENST00000354895.4 |
||
| CDS CAA 72 bp | AATGGCCGCGCCCCTCCTGGCCCTCTGACTCGGCGATaGGCCGGCCGTGCTCGCACTCCACGACCCAAATGG | + |
|
Preference number: 6 (lower is better) Translates to: NGRAPPGPLTRR*AGRARTPRPKW Trigger: CCATTTGGGTCGTGGAGTGCGAGCACGGCCGGCCAATCGCCGAGTCAGAGGGCCAGGAGGGGCGCGGCCATT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000319788.11 ENST00000354895.4 |
||
| CDS GCA 72 bp | CCCTCCTGGCCCTCTGACTCGGCGATTGGCCGGCCGTaGTCGCACTCCACGACCCAAATGGCTGTTCCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: PSWPSDSAIGRP*SHSTTQMAVPG Trigger: CCCTGGAACAGCCATTTGGGTCGTGGAGTGCGAGCACGGCCGGCCAATCGCCGAGTCAGAGGGCCAGGAGGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000319788.11 ENST00000354895.4 |
||
| CDS CCA 72 bp | CCGGGCACACCGATCCCAGACTCCAGAATAATCATCTaGCATCCTGGCCGCCCTGCTCCGAGGCCCCACGCC | + |
|
Preference number: 6 (lower is better) Translates to: PGTPIPDSRIII*HPGRPAPRPHA Trigger: GGCGTGGGGCCTCGGAGCAGGGCGGCCAGGATGCCAGATGATTATTCTGGAGTCTGGGATCGGTGTGCCCGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394971.7 |
||
| CDS GCA 72 bp | ACCATTCGGGCTGCAGCCTCCCATCCTCCCGGGTCCTaGCTCACCAGTGCTTCCTGGTGGTCGGTCTCCCTT | + |
|
Preference number: 6 (lower is better) Translates to: TIRAAASHPPGS*LTSASWWSVSL Trigger: AAGGGAGACCGACCACCAGGAAGCACTGGTGAGGCAGGACCCGGGAGGATGGGAGGCTGCAGCCCGAATGGT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000420057.2 ENST00000498155.1 |
||
| CDS CCA 72 bp | CGATTGGCCGGCCGTGCTCGCACTCCACGACCCAAATaGCTGTTCCAGGGCGCTAGTCAAGCGGGCGAGTTA | + |
|
Preference number: 6 (lower is better) Translates to: RLAGRARTPRPK*LFQGASQAGEL Trigger: TAACTCGCCCGCTTGACTAGCGCCCTGGAACAGCCATTTGGGTCGTGGAGTGCGAGCACGGCCGGCCAATCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000319788.11 ENST00000354895.4 |
||
| CDS CCA 72 bp | CTTGCCTCGCACTCTTATTTCGAACACCAGTATCGCTaGGTAGCTCAGCCCCTGTGCAACGACCCCGCGAGC | + |
|
Preference number: 6 (lower is better) Translates to: LASHSYFEHQYR*VAQPLCNDPAS Trigger: GCTCGCGGGGTCGTTGCACAGGGGCTGAGCTACCCAGCGATACTGGTGTTCGAAATAAGAGTGCGAGGCAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000394971.7 |
||
| CDS CCA 72 bp | CGACCTCCCATCCTAGTCCAAGGGTCGATGATCTCCTaGCACCGGGCACCTTTGGCCACGTCAGGATTCCAT | + |
|
Preference number: 6 (lower is better) Translates to: RPPILVQGSMIS*HRAPLATSGFH Trigger: ATGGAATCCTGACGTGGCCAAAGGTGCCCGGTGCCAGGAGATCATCGACCCTTGGACTAGGATGGGAGGTCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000472468.1 |
||
| CDS CAA 90 bp | CTACCGCCATCCTGCCTCCCCGCCTTTCCTGGTCACCGTTATTCCTaGGCATCCAATTCACGTGCGAGTCCCCGGAATAATCCCAGTCCC | + |
|
Preference number: 6 (lower is better) Translates to: LPPSCLPAFPGHRYS*ASNSRASPRNNPSP Trigger: GGGACTGGGATTATTCCGGGGACTCGCACGTGAATTGGATGCCAAGGAATAACGGTGACCAGGAAAGGCGGGGAGGCAGGATGGCGGTAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000394971.7 |
||
| CDS CCA 72 bp | CCTGCCTCCCCGCCTTTCCTGGTCACCGTTATTCCTTaGCATCCAATTCACGTGCGAGTCCCCGGAATAATC | + |
|
Preference number: 6 (lower is better) Translates to: PASPPFLVTVIP*HPIHVRVPGII Trigger: GATTATTCCGGGGACTCGCACGTGAATTGGATGCCAAGGAATAACGGTGACCAGGAAAGGCGGGGAGGCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000394971.7 |
||
| CDS CCA 72 bp | GGGTGGAACCAGGTTAGGACTGTCAACCCAGTGCCTTaGACCCTGCCCGAGAAAGGTGATTTCCAAGAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: GWNQVRTVNPVP*TLPEKGDFQEA Trigger: GGCTTCTTGGAAATCACCTTTCTCGGGCAGGGTCCAAGGCACTGGGTTGACAGTCCTAACCTGGTTCCACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000472468.1 |
||
| CDS CAA 90 bp | CCTAACCTCTCTACTATCATGGCGCCCGCCTGGCAACACCTGAGCTaGCATCAACTCAACAGTCAGTCTCTCCTTTCCAAGCTGTGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: PNLSTIMAPAWQHLS*HQLNSQSLLSKLWA Trigger: GGCCCACAGCTTGGAAAGGAGAGACTGACTGTTGAGTTGATGCAAGCTCAGGTGTTGCCAGGCGGGCGCCATGATAGTAGAGAGGTTAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000498155.1 |
||
| CDS TCA 72 bp | TGTCAACCCAGTGCCTTGGACCCTGCCCGAGAAAGGTaGTTTCCAAGAAGCCACCTGGGCTATCCTCTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: CQPSALDPARER*FPRSHLGYPLF Trigger: GAACAGAGGATAGCCCAGGTGGCTTCTTGGAAATCACCTTTCTCGGGCAGGGTCCAAGGCACTGGGTTGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000472468.1 |
||
| CDS CCA 72 bp | TCAATCTCTACCGCCATCCTGCCTCCCCGCCTTTCCTaGTCACCGTTATTCCTTGGCATCCAATTCACGTGC | + |
|
Preference number: 6 (lower is better) Translates to: SISTAILPPRLS*SPLFLGIQFTC Trigger: GCACGTGAATTGGATGCCAAGGAATAACGGTGACCAGGAAAGGCGGGGAGGCAGGATGGCGGTAGAGATTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394971.7 |
||
| CDS CAA 72 bp | TCCTGCCTCCCCGCCTTTCCTGGTCACCGTTATTCCTaGGCATCCAATTCACGTGCGAGTCCCCGGAATAAT | + |
|
Preference number: 6 (lower is better) Translates to: SCLPAFPGHRYS*ASNSRASPRNN Trigger: ATTATTCCGGGGACTCGCACGTGAATTGGATGCCAAGGAATAACGGTGACCAGGAAAGGCGGGGAGGCAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000394971.7 |
||
| CDS TCA 72 bp | ATACGGCGATCCGATTCGGGAACCAAGCATTTCCCCTaGAACTATTTCAGGCACCATTCGGGCTGCAGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: IRRSDSGTKHFP*NYFRHHSGCSL Trigger: GAGGCTGCAGCCCGAATGGTGCCTGAAATAGTTTCAGGGGAAATGCTTGGTTCCCGAATCGGATCGCCGTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000420057.2 ENST00000498155.1 |
||
| CDS TCA 72 bp | AACAGTCAGTCTCTCCTTTCCAAGCTGTGGGCCAGATaGGGTCTCTCCTTCACAGACGTCCCATCTGATGGT | + |
|
Preference number: 6 (lower is better) Translates to: NSQSLLSKLWAR*GLSFTDVPSDG Trigger: ACCATCAGATGGGACGTCTGTGAAGGAGAGACCTCATCTGGCCCACAGCTTGGAAAGGAGAGACTGACTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000498155.1 |
||
| CDS TCA 72 bp | ACCTCTCTACTATCATGGCGCCCGCCTGGCAACACCTaGGCTTGCATCAACTCAACAGTCAGTCTCTCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: TSLLSWRPPGNT*ACINSTVSLSF Trigger: AAAGGAGAGACTGACTGTTGAGTTGATGCAAGCTCAGGTGTTGCCAGGCGGGCGCCATGATAGTAGAGAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000498155.1 |
||
| CDS CCA 72 bp | CAGTATCCTAACCTCTCTACTATCATGGCGCCCGCCTaGCAACACCTGAGCTTGCATCAACTCAACAGTCAG | + |
|
Preference number: 6 (lower is better) Translates to: QYPNLSTIMAPA*QHLSLHQLNSQ Trigger: CTGACTGTTGAGTTGATGCAAGCTCAGGTGTTGCCAGGCGGGCGCCATGATAGTAGAGAGGTTAGGATACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000498155.1 |
||
| CDS CAA 72 bp | TCTACTATCATGGCGCCCGCCTGGCAACACCTGAGCTaGCATCAACTCAACAGTCAGTCTCTCCTTTCCAAG | + |
|
Preference number: 6 (lower is better) Translates to: STIMAPAWQHLS*HQLNSQSLLSK Trigger: CTTGGAAAGGAGAGACTGACTGTTGAGTTGATGCAAGCTCAGGTGTTGCCAGGCGGGCGCCATGATAGTAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000498155.1 |
||
| CDS CAA 90 bp | CTCCTCTCCCGGCATTATCCCATCTACCCCTCCACATTCAAGTTTTaGGAAAGATTCTACACTCCCAGTCTCTACTTCCTCACTTCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: LLSRHYPIYPSTFKF*ERFYTPSLYFLTSS Trigger: GGAAGAAGTGAGGAAGTAGAGACTGGGAGTGTAGAATCTTTCCAAAAACTTGAATGTGGAGGGGTAGATGGGATAATGCCGGGAGAGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000498155.1 |
||
| CDS GCA 72 bp | CTACACCTTCAACCTCTCCATCCTCCCCATCTACACTaGAACTTGTTTCTCTTTCCCATCTCAGAAACAGCA | + |
|
Preference number: 6 (lower is better) Translates to: LHLQPLHPPHLH*NLFLFPISETA Trigger: TGCTGTTTCTGAGATGGGAAAGAGAAACAAGTTGCAGTGTAGATGGGGAGGATGGAGAGGTTGAAGGTGTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000498155.1 |
||
| CDS CAA 72 bp | CGGCATTATCCCATCTACCCCTCCACATTCAAGTTTTaGGAAAGATTCTACACTCCCAGTCTCTACTTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: RHYPIYPSTFKF*ERFYTPSLYFL Trigger: GAGGAAGTAGAGACTGGGAGTGTAGAATCTTTCCAAAAACTTGAATGTGGAGGGGTAGATGGGATAATGCCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000498155.1 |
||
| CDS CCA 72 bp | GGCATTATCCCATCTACCCCTCCACATTCAAGTTTTTaGAAAGATTCTACACTCCCAGTCTCTACTTCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: GIIPSTPPHSSF*KDSTLPVSTSS Trigger: TGAGGAAGTAGAGACTGGGAGTGTAGAATCTTTCCAAAAACTTGAATGTGGAGGGGTAGATGGGATAATGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000498155.1 |
||
| CDS CAA 72 bp | CTTCAACCTCTCCATCCTCCCCATCTACACTGCAACTaGTTTCTCTTTCCCATCTCAGAAACAGCAACAAAT | + |
|
Preference number: 6 (lower is better) Translates to: LQPLHPPHLHCN*FLFPISETATN Trigger: ATTTGTTGCTGTTTCTGAGATGGGAAAGAGAAACAAGTTGCAGTGTAGATGGGGAGGATGGAGAGGTTGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000498155.1 |
||